Citrus Sinensis ID: 028258
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 211 | 2.2.26 [Sep-21-2011] | |||||||
| Q6PQJ9 | 389 | 3-oxo-Delta(4,5)-steroid | N/A | no | 0.919 | 0.498 | 0.420 | 5e-36 | |
| Q9STX2 | 388 | 3-oxo-Delta(4,5)-steroid | yes | no | 0.890 | 0.484 | 0.46 | 5e-35 | |
| O74913 | 405 | Uncharacterized protein C | yes | no | 0.834 | 0.434 | 0.256 | 0.0001 |
| >sp|Q6PQJ9|5BPOR_DIGLA 3-oxo-Delta(4,5)-steroid 5-beta-reductase OS=Digitalis lanata PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 150 bits (380), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 87/207 (42%), Positives = 122/207 (58%), Gaps = 13/207 (6%)
Query: 1 MEKQDQNPK--SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALV 58
+E+ D PK SVALI+GVTGI G SLAE L TPG PWKVYG ARR P W +
Sbjct: 16 LEEDDAQPKHSSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAWHEDNPI 75
Query: 59 DRYITFDALDPTDTALKLSLISQEITNLFWVPLQVQESEEVNIFKNSTMLKNVLSVLVSS 118
+ Y+ D DP D+ KLS ++ ++T++F+V + +E+ N NS M +NVL ++ +
Sbjct: 76 N-YVQCDISDPDDSQAKLSPLT-DVTHVFYVTWANRSTEQENCEANSKMFRNVLDAVIPN 133
Query: 119 NSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDV-- 176
L+H++L TG KHYMGP G++ ++ P+ ED RL + NFYY+LED+
Sbjct: 134 C---PNLKHISLQTGRKHYMGPF---ESYGKIESHDPPYTEDLPRLKYMNFYYDLEDIML 187
Query: 177 -SASYSPAITYSVHRSSVIIGASPRSL 202
+T+SVHR I G SP S+
Sbjct: 188 EEVEKKEGLTWSVHRPGNIFGFSPYSM 214
|
Involved in cardenolide biosynthesis. Catalyzes the stereospecific conversion of progesterone to 5-beta-pregnane-3,20-dione. Can use progesterone, testosterone, 4-androstene-3,17-dione, cortisol and cortisone as substrates, but not pregnenolone, 21-OH-pregnenolone or isoprogesterone. NADPH could not be replaced by NADH. Digitalis lanata (taxid: 49450) EC: 1EC: .EC: 3EC: .EC: 1EC: .EC: 3 |
| >sp|Q9STX2|VEP1_ARATH 3-oxo-Delta(4,5)-steroid 5-beta-reductase OS=Arabidopsis thaliana GN=VEP1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 147 bits (371), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 92/200 (46%), Positives = 118/200 (59%), Gaps = 12/200 (6%)
Query: 6 QNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFD 65
Q+ +SVALIIGVTGI G SLAE L TPG PWKVYG ARRP P W +D YI D
Sbjct: 23 QSFESVALIIGVTGIVGNSLAEILPLSDTPGGPWKVYGVARRPRPTWNADHPID-YIQCD 81
Query: 66 ALDPTDTALKLSLISQEITNLFWVPLQVQESEEVNIFKNSTMLKNVLSVLVSSNSGRSRL 125
D DT KLS ++ ++T++F+V +ESE N N +ML+NVL ++ L
Sbjct: 82 VSDAEDTRSKLSPLT-DVTHVFYVTWTNRESESENCEANGSMLRNVLQAIIPY---APNL 137
Query: 126 RHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDV---SASYSP 182
RHV L TGTKHY+GP ++ G ++ PF ED RL NFYY ED+
Sbjct: 138 RHVCLQTGTKHYLGPF--TNVDGPR--HDPPFTEDMPRLQIQNFYYTQEDILFEEIKKIE 193
Query: 183 AITYSVHRSSVIIGASPRSL 202
+T+S+HR ++I G SP SL
Sbjct: 194 TVTWSIHRPNMIFGFSPYSL 213
|
Involved in vascular strand development. Catalyzes the stereospecific conversion of progesterone to 5-beta-pregnane-3,20-dione. Can use progesterone, testosterone, 21-acetyl cortexone, 2-cyclohexenone, but-1-en-3-one, ethyl acrylate, ethylmethacrylate, cortisone and canarigenone as substrates, lower activity with 3-methyl-2-cyclohexenone and 3,5,5-trimethyl-2-cyclohexenone as substrate, and no activity with canarigenin, canarigenin digitoxoside and pregnenolone. May be involved in the formation of 5-beta phytoecdysteroids. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 3 EC: . EC: 1 EC: . EC: 3 |
| >sp|O74913|YJ72_SCHPO Uncharacterized protein C757.02c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC757.02c PE=4 SV=1 | Back alignment and function description |
|---|
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 79/199 (39%), Gaps = 23/199 (11%)
Query: 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPT 70
VA++ G TG++G ++ + L + K R +P + I +P
Sbjct: 7 VAIVTGATGLNGAAIIKRL----SEDDNCKTIHCISRSLKDEYPRKIKHHSIDLLNEEPK 62
Query: 71 DTALKLSLISQEITNLFWVPLQVQESEEVNIFK-NSTMLKNVLSVLVSSNSGRSRLRHVA 129
D A K SL + N + +E+ E + + N ML+N + L ++ LR V
Sbjct: 63 DIAKKFSLEGVKGINYAYFAAYKEENNEEKLCEVNGNMLRNFVQALELTSI--QTLRRVI 120
Query: 130 LLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLP-----FPNFYYELEDVSASYSPAI 184
L TG K Y L +P E R+P PNFYY ED+ +S
Sbjct: 121 LTTGLKFY---------GLHLGEVRLPMIETDIRVPETFSGTPNFYYVQEDILKEFSNGK 171
Query: 185 T--YSVHRSSVIIGASPRS 201
Y++ + I G S S
Sbjct: 172 KWDYTIAMPNDICGVSKGS 190
|
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 211 | ||||||
| 224132720 | 377 | predicted protein [Populus trichocarpa] | 0.947 | 0.530 | 0.673 | 4e-71 | |
| 118489550 | 377 | unknown [Populus trichocarpa x Populus d | 0.943 | 0.527 | 0.671 | 7e-71 | |
| 224132716 | 377 | predicted protein [Populus trichocarpa] | 0.947 | 0.530 | 0.648 | 1e-68 | |
| 359477226 | 470 | PREDICTED: uncharacterized protein C757. | 0.928 | 0.417 | 0.641 | 7e-68 | |
| 225431890 | 376 | PREDICTED: uncharacterized protein C757. | 0.933 | 0.523 | 0.65 | 3e-67 | |
| 356521805 | 374 | PREDICTED: uncharacterized protein LOC10 | 0.933 | 0.526 | 0.605 | 8e-65 | |
| 357473789 | 376 | hypothetical protein MTR_4g073090 [Medic | 0.909 | 0.510 | 0.592 | 4e-60 | |
| 357478899 | 376 | hypothetical protein MTR_4g121570 [Medic | 0.919 | 0.515 | 0.580 | 2e-59 | |
| 357478903 | 376 | hypothetical protein MTR_4g121590 [Medic | 0.905 | 0.507 | 0.569 | 3e-57 | |
| 148907065 | 399 | unknown [Picea sitchensis] | 0.919 | 0.486 | 0.466 | 6e-39 |
| >gi|224132720|ref|XP_002327864.1| predicted protein [Populus trichocarpa] gi|222837273|gb|EEE75652.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 273 bits (697), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 136/202 (67%), Positives = 159/202 (78%), Gaps = 2/202 (0%)
Query: 1 MEKQDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDR 60
MEK+ + SVALI+G+TG++G SLAEAL+ PTTPG PWKVYG ARRP P WFP LVD
Sbjct: 1 MEKEISSDASVALIVGITGLAGFSLAEALQKPTTPGRPWKVYGIARRPLPIWFPAFLVDG 60
Query: 61 YITFDALDPTDTALKLSLISQEITNLFWVPLQVQESEEVNIFKNSTMLKNVLSVLVSSNS 120
+I+ DALD DTA KLS ++ EIT++FWV +Q +EEVNI NSTML NVL+ L S +
Sbjct: 61 FISLDALDCADTANKLSPVAHEITHVFWVSMQHHGNEEVNISMNSTMLANVLNALKS--T 118
Query: 121 GRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVSASY 180
SRLRHV LLTGTKHYMGPIFDPSL GQL+ E PFKED RLP+PNFYY LED+ ASY
Sbjct: 119 APSRLRHVTLLTGTKHYMGPIFDPSLRGQLVHQEPPFKEDLGRLPYPNFYYALEDLVASY 178
Query: 181 SPAITYSVHRSSVIIGASPRSL 202
P+IT+SVHRSS+IIGAS RSL
Sbjct: 179 LPSITHSVHRSSIIIGASSRSL 200
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|118489550|gb|ABK96577.1| unknown [Populus trichocarpa x Populus deltoides] | Back alignment and taxonomy information |
|---|
Score = 272 bits (695), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 135/201 (67%), Positives = 158/201 (78%), Gaps = 2/201 (0%)
Query: 1 MEKQDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDR 60
MEK++ + SVALI+G+TG++G SLAEAL+ PTTPG PWKVYG ARRP P WFP LVD
Sbjct: 1 MEKENSSDASVALIVGITGLAGFSLAEALQKPTTPGRPWKVYGIARRPLPRWFPAFLVDG 60
Query: 61 YITFDALDPTDTALKLSLISQEITNLFWVPLQVQESEEVNIFKNSTMLKNVLSVLVSSNS 120
+I+ DALD DTA KLS ++ EIT++FWV +Q +EEVNI NSTML NVL+ L S +
Sbjct: 61 FISLDALDCADTANKLSPVAHEITHVFWVSMQHHGNEEVNISMNSTMLANVLNALKS--T 118
Query: 121 GRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVSASY 180
SRLRHV LLTGTKHYMGPIFDPSL GQL+ E PFKED RLP PNFYY LED+ ASY
Sbjct: 119 APSRLRHVTLLTGTKHYMGPIFDPSLRGQLVHQEPPFKEDLGRLPCPNFYYALEDLVASY 178
Query: 181 SPAITYSVHRSSVIIGASPRS 201
P+IT+SVHRSS+IIGAS RS
Sbjct: 179 LPSITHSVHRSSIIIGASSRS 199
|
Source: Populus trichocarpa x Populus deltoides Species: Populus trichocarpa x Populus deltoides Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224132716|ref|XP_002327863.1| predicted protein [Populus trichocarpa] gi|222837272|gb|EEE75651.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 264 bits (675), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 131/202 (64%), Positives = 157/202 (77%), Gaps = 2/202 (0%)
Query: 1 MEKQDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDR 60
MEK+ VALI+GVTG+ G SLAEALK PTT GSPWKVYG ARRP P WFP++L+D
Sbjct: 1 MEKEKSPDTLVALIVGVTGMVGFSLAEALKQPTTQGSPWKVYGVARRPLPSWFPSSLIDC 60
Query: 61 YITFDALDPTDTALKLSLISQEITNLFWVPLQVQESEEVNIFKNSTMLKNVLSVLVSSNS 120
+++ DALD DT KL ++ EIT++FW+ ++++SEEVNI NSTML NVL+ L S+
Sbjct: 61 FLSLDALDHEDTKNKLFPVAHEITHVFWISRKLRDSEEVNISMNSTMLANVLNALKSAFP 120
Query: 121 GRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVSASY 180
SRLRHV LLTGTKHYMGPIFDPSL GQL+ E PFKED RLP+PNFYY LED+ SY
Sbjct: 121 --SRLRHVTLLTGTKHYMGPIFDPSLRGQLVHQEPPFKEDLGRLPYPNFYYALEDLVVSY 178
Query: 181 SPAITYSVHRSSVIIGASPRSL 202
P+IT+SVHRSS+IIGAS RSL
Sbjct: 179 LPSITHSVHRSSIIIGASSRSL 200
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359477226|ref|XP_002276059.2| PREDICTED: uncharacterized protein C757.02c-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 262 bits (669), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 127/198 (64%), Positives = 158/198 (79%), Gaps = 2/198 (1%)
Query: 6 QNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFD 65
Q+ K+VALI+GVTG+ GLSLAEALK P G PWKVYGAARRP P WFPT+ VD YI FD
Sbjct: 96 QSYKTVALIVGVTGMVGLSLAEALKKPRALGGPWKVYGAARRPKPTWFPTSNVDDYIAFD 155
Query: 66 ALDPTDTALKLSLISQEITNLFWVPLQVQESEEVNIFKNSTMLKNVLSVLVSSNSGRSRL 125
A++P DT KLS IS E+T++FWV +QV+E+EE+N+ N+ ML NVL VL S S SRL
Sbjct: 156 AVNPDDTRAKLSPISHEVTHVFWVAIQVRETEELNVTVNAAMLSNVLGVLKSVPS--SRL 213
Query: 126 RHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVSASYSPAIT 185
RH+ L TGT+HY+GP+ DP+ +GQL E PF+EDS+RLPFPNFYY LED+ ASYSP+++
Sbjct: 214 RHLTLQTGTQHYIGPLHDPNHSGQLPCPETPFREDSARLPFPNFYYALEDLIASYSPSLS 273
Query: 186 YSVHRSSVIIGASPRSLY 203
YS+HRSS+I+GAS RS Y
Sbjct: 274 YSIHRSSIILGASSRSAY 291
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225431890|ref|XP_002276159.1| PREDICTED: uncharacterized protein C757.02c-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 260 bits (664), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 130/200 (65%), Positives = 155/200 (77%), Gaps = 3/200 (1%)
Query: 5 DQNPK-SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYIT 63
DQ P SVALI+GVTG++GLSLAEALK P+ GSPWKVYGAARRP P WFP ++VD Y+T
Sbjct: 4 DQIPHASVALIVGVTGMAGLSLAEALKKPSASGSPWKVYGAARRPQPTWFPISIVDHYMT 63
Query: 64 FDALDPTDTALKLSLISQEITNLFWVPLQVQESEEVNIFKNSTMLKNVLSVLVSSNSGRS 123
FDA+ DT KLS IS E+T++FWV +QV+E+EE+NI N+ ML NVL V S+ S S
Sbjct: 64 FDAVCSDDTRAKLSPISNEVTHVFWVAIQVRETEELNITVNAAMLSNVLEVFKSAPS--S 121
Query: 124 RLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVSASYSPA 183
RL+HV L TGTKHYMGPIF P + QL E PF+ED RLPFPNFYY LED+ AS++P+
Sbjct: 122 RLQHVTLQTGTKHYMGPIFYPEKSKQLTAPETPFREDFPRLPFPNFYYALEDLLASHTPS 181
Query: 184 ITYSVHRSSVIIGASPRSLY 203
TYSVHRSS+IIGAS RS Y
Sbjct: 182 FTYSVHRSSIIIGASSRSTY 201
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356521805|ref|XP_003529541.1| PREDICTED: uncharacterized protein LOC100812240 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 252 bits (643), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 123/203 (60%), Positives = 151/203 (74%), Gaps = 6/203 (2%)
Query: 1 MEKQDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDR 60
ME Q SVALI+GVTG++GLSLAE LK P G PWKVYGAARRPPP WF ++VD
Sbjct: 1 MEAQ----ASVALIVGVTGLTGLSLAETLKKPNCLGGPWKVYGAARRPPPSWFSPSMVDH 56
Query: 61 YITFDALDPTDTALKLSLISQEITNLFWVPLQVQESEEVNIFKNSTMLKNVLSVLVSSNS 120
+ITFDA D +DT KLS I+ E+T+LFWV Q+ EE N N TML N+L+ L SS +
Sbjct: 57 FITFDAEDSSDTRAKLSPIAHEVTHLFWVTFQIHADEEYNATVNKTMLLNLLTALKSSTT 116
Query: 121 GRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVSASY 180
SRL HV + TGTKHYMGP+FDP + QL+ ++ PF E+ RLP+PNFYY LED+ ASY
Sbjct: 117 --SRLAHVTVQTGTKHYMGPVFDPVHSTQLIGHQPPFDENMPRLPYPNFYYALEDLVASY 174
Query: 181 SPAITYSVHRSSVIIGASPRSLY 203
+P++TYSVHRSS+IIGAS RS+Y
Sbjct: 175 APSLTYSVHRSSIIIGASSRSVY 197
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357473789|ref|XP_003607179.1| hypothetical protein MTR_4g073090 [Medicago truncatula] gi|355508234|gb|AES89376.1| hypothetical protein MTR_4g073090 [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 236 bits (602), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 115/194 (59%), Positives = 146/194 (75%), Gaps = 2/194 (1%)
Query: 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDP 69
SVAL++GVTG++GLSLA+ALK P G PWKVYGAARR GWFP++++D +ITFDA++
Sbjct: 6 SVALVVGVTGMAGLSLAKALKQPDCLGGPWKVYGAARRSADGWFPSSILDGFITFDAVNS 65
Query: 70 TDTALKLSLISQEITNLFWVPLQVQESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVA 129
DT KL + QE+T+LFWV Q EE NI N TML NVL+VL SS S S L H+
Sbjct: 66 ADTHDKLLPLVQEVTHLFWVTFQFVGDEEANITVNKTMLLNVLTVLKSSPS--SSLIHIT 123
Query: 130 LLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVSASYSPAITYSVH 189
L TGTKHYMGP+ DP L+ +L+ +E PF E+ RLP+PNFYY LED+ SY+P++TYS+H
Sbjct: 124 LQTGTKHYMGPVHDPVLSTKLICHEPPFHENMPRLPYPNFYYVLEDLVTSYAPSVTYSIH 183
Query: 190 RSSVIIGASPRSLY 203
RSS+IIG SPRS +
Sbjct: 184 RSSIIIGMSPRSAH 197
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357478899|ref|XP_003609735.1| hypothetical protein MTR_4g121570 [Medicago truncatula] gi|355510790|gb|AES91932.1| hypothetical protein MTR_4g121570 [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 115/198 (58%), Positives = 148/198 (74%), Gaps = 4/198 (2%)
Query: 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYIT 63
+ Q+P VAL++GVTG+ GLSLAEALK P G PWKVYG AR P WFP++++D +IT
Sbjct: 2 EHQSP--VALVVGVTGMVGLSLAEALKQPDCLGGPWKVYGGARHSPDEWFPSSILDGFIT 59
Query: 64 FDALDPTDTALKLSLISQEITNLFWVPLQVQESEEVNIFKNSTMLKNVLSVLVSSNSGRS 123
FDA++ DT KL I+ E+T++FWV Q E EEVNI N +ML NV++VL SS S S
Sbjct: 60 FDAVNSADTHAKLLPIANEVTHIFWVTFQFVEDEEVNITVNKSMLHNVVTVLKSSPS--S 117
Query: 124 RLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVSASYSPA 183
L H+ + TGTKHYMGPI+DP + +L+ +E PF E+ RLP+PNFYY LED+ ASY+P+
Sbjct: 118 PLTHITVQTGTKHYMGPIYDPVRSNKLICHEPPFNENMPRLPYPNFYYTLEDLVASYTPS 177
Query: 184 ITYSVHRSSVIIGASPRS 201
ITYS+HRSS+IIGAS RS
Sbjct: 178 ITYSIHRSSLIIGASSRS 195
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357478903|ref|XP_003609737.1| hypothetical protein MTR_4g121590 [Medicago truncatula] gi|355510792|gb|AES91934.1| hypothetical protein MTR_4g121590 [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 110/193 (56%), Positives = 144/193 (74%), Gaps = 2/193 (1%)
Query: 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPT 70
VAL++GVTG++GLSLA+ALK P G PWKVYGAAR P WFP++++D +ITFDA++
Sbjct: 7 VALVVGVTGMAGLSLAKALKQPDCLGGPWKVYGAARHSPDEWFPSSILDSFITFDAVNSA 66
Query: 71 DTALKLSLISQEITNLFWVPLQVQESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVAL 130
DT KL I+ E+T+LFWV Q+ EEV I N +ML NVL+VL S S S L H+ +
Sbjct: 67 DTRAKLLPIANEVTHLFWVTFQLVADEEVKISVNKSMLLNVLTVLKSYPS--SPLTHITV 124
Query: 131 LTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVSASYSPAITYSVHR 190
TGTKHY+GP+ DP + +L+ +E PF+E+ RL +PNFYY LED+ SY+P+ITYS+HR
Sbjct: 125 QTGTKHYLGPVHDPVQSTKLICHEPPFEENMPRLSYPNFYYALEDLVKSYAPSITYSIHR 184
Query: 191 SSVIIGASPRSLY 203
SS+IIGASPRS Y
Sbjct: 185 SSIIIGASPRSAY 197
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|148907065|gb|ABR16676.1| unknown [Picea sitchensis] | Back alignment and taxonomy information |
|---|
Score = 166 bits (420), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 96/206 (46%), Positives = 125/206 (60%), Gaps = 12/206 (5%)
Query: 2 EKQDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRY 61
E + + + VAL+IGVTGI G SL E L TPG PWK+YG ARRP P W P V+ Y
Sbjct: 26 EDKSEKQQGVALVIGVTGIVGNSLVEILPLSDTPGGPWKIYGVARRPKPDWSPDTSVE-Y 84
Query: 62 ITFDALDPTDTALKLSLISQEITNLFWVPLQVQESEEVNIFKNSTMLKNVLSVLVSSNSG 121
I D LD T K+S + +++T+LFWV +E+EE N N ML NVL L+ +
Sbjct: 85 IQCDVLDRELTLEKISPL-KDVTHLFWVVWVNRETEEQNCEDNGRMLSNVLDALLPN--- 140
Query: 122 RSRLRHVALLTGTKHYMGPIFDPSLAGQ--LMPYEVPFKEDSSRLPFPNFYYELEDV--- 176
L+H+ L TG KHY+GP FD ++AG P+E P+ E+ RLP PNFYY LED+
Sbjct: 141 AENLQHICLQTGAKHYLGP-FD-AVAGNRYFQPHEAPYHEELPRLPVPNFYYTLEDIVFE 198
Query: 177 SASYSPAITYSVHRSSVIIGASPRSL 202
+A +T+S+HR S I G SP SL
Sbjct: 199 AAKKKDGLTWSIHRPSFIFGFSPWSL 224
|
Source: Picea sitchensis Species: Picea sitchensis Genus: Picea Family: Pinaceae Order: Coniferales Class: Coniferopsida Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 211 | ||||||
| TAIR|locus:2135932 | 388 | VEP1 "VEIN PATTERNING 1" [Arab | 0.909 | 0.494 | 0.426 | 4.7e-32 | |
| UNIPROTKB|Q882D3 | 353 | PSPTO_2695 "Uncharacterized pr | 0.786 | 0.470 | 0.314 | 4.3e-14 | |
| TAIR|locus:2178793 | 386 | AT5G58750 [Arabidopsis thalian | 0.905 | 0.494 | 0.273 | 4.5e-14 | |
| UNIPROTKB|Q48IK0 | 353 | PSPPH_2587 "Aldo-keto reductas | 0.786 | 0.470 | 0.308 | 9.3e-14 | |
| UNIPROTKB|Q4K649 | 386 | PFL_5207 "Uncharacterized prot | 0.824 | 0.450 | 0.267 | 2.8e-05 |
| TAIR|locus:2135932 VEP1 "VEIN PATTERNING 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 351 (128.6 bits), Expect = 4.7e-32, P = 4.7e-32
Identities = 87/204 (42%), Positives = 113/204 (55%)
Query: 2 EKQDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRY 61
++ Q+ +SVALIIGVTGI G SLAE L TPG PWKVYG ARRP P W +D Y
Sbjct: 19 DEPSQSFESVALIIGVTGIVGNSLAEILPLSDTPGGPWKVYGVARRPRPTWNADHPID-Y 77
Query: 62 ITFDALDPTDTALKLSLISQEITNLFWVPLQVQESEEVNIFKNSTMLKXXXXXXXXXXXX 121
I D D DT KLS ++ ++T++F+V +ESE N N +ML+
Sbjct: 78 IQCDVSDAEDTRSKLSPLT-DVTHVFYVTWTNRESESENCEANGSMLRNVLQAIIPYAPN 136
Query: 122 XXXXXHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDV---SA 178
HV L TGTKHY+GP ++ G ++ PF ED RL NFYY ED+
Sbjct: 137 LR---HVCLQTGTKHYLGPF--TNVDGPR--HDPPFTEDMPRLQIQNFYYTQEDILFEEI 189
Query: 179 SYSPAITYSVHRSSVIIGASPRSL 202
+T+S+HR ++I G SP SL
Sbjct: 190 KKIETVTWSIHRPNMIFGFSPYSL 213
|
|
| UNIPROTKB|Q882D3 PSPTO_2695 "Uncharacterized protein" [Pseudomonas syringae pv. tomato str. DC3000 (taxid:223283)] | Back alignment and assigned GO terms |
|---|
Score = 186 (70.5 bits), Expect = 4.3e-14, P = 4.3e-14
Identities = 60/191 (31%), Positives = 87/191 (45%)
Query: 12 ALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP--PGWFPTALVDRYITFDALDP 69
AL++G +GI G ++ + L + W+V +R P PG P A D DP
Sbjct: 5 ALVVGASGIVGSAITQLLLE-----NDWQVAALSRSPSTRPGVIPVAA-------DLQDP 52
Query: 70 TDTALKLSLISQEITNLFWVPLQVQESEEVNIFKNSTMLKXXXXXXXXXXXXXXXXXHVA 129
L+ + T++F Q +E NI N+ M++ HVA
Sbjct: 53 ASVTAALADLRP--THIFITTWSRQATEAENIRVNAAMVRNVLDAVRPAGSVK----HVA 106
Query: 130 LLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELED--VSASYSPAITYS 187
L+TG KHY+GP F+ G L P + PF+E RL NFYY ED +A+ T+S
Sbjct: 107 LVTGLKHYLGP-FEAYGKGTL-P-QTPFRESQPRLDIENFYYAQEDEVFAAAEKDRFTWS 163
Query: 188 VHRSSVIIGAS 198
VHR + G +
Sbjct: 164 VHRPHTVTGVA 174
|
|
| TAIR|locus:2178793 AT5G58750 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 187 (70.9 bits), Expect = 4.5e-14, P = 4.5e-14
Identities = 56/205 (27%), Positives = 103/205 (50%)
Query: 3 KQDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYI 62
++++ ++VALI GVTG+ G + + L + PG W++YG AR P T + + +I
Sbjct: 10 RRNEVDENVALIFGVTGLVGREIVKTLLM-SKPG--WRIYGVARNPEINSM-TKMYN-FI 64
Query: 63 TFDALDPTDTALKLSLISQEITNLFWVPLQVQ---ESEEVNIFKNSTMLKXXXXXXXXXX 119
+ D L+ ++T +LS + ++++FWV + +++E + +N TML
Sbjct: 65 SCDLLNASETKQRLSPLQDIVSHVFWVTWSGEFPLDTDECCV-QNKTMLMNALDAILPNA 123
Query: 120 XXXXXXXHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVSAS 179
H +L TG KHY+ + + G+ +E + NFYY LED+
Sbjct: 124 KRLK---HFSLQTGMKHYVSLVEETMARGEGSSLYYYSEECPRKSSGKNFYYVLEDLLKE 180
Query: 180 Y--SPAITYSVHRSSVIIGASPRSL 202
++ +SV R +++G+S R+L
Sbjct: 181 KITRSSVVWSVQRPGLLMGSSSRTL 205
|
|
| UNIPROTKB|Q48IK0 PSPPH_2587 "Aldo-keto reductase family protein" [Pseudomonas syringae pv. phaseolicola 1448A (taxid:264730)] | Back alignment and assigned GO terms |
|---|
Score = 183 (69.5 bits), Expect = 9.3e-14, P = 9.3e-14
Identities = 59/191 (30%), Positives = 89/191 (46%)
Query: 12 ALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP--PGWFPTALVDRYITFDALDP 69
AL++G +GI G ++ + L + W+V +R P PG P A D +P
Sbjct: 5 ALVVGASGIVGSAITQLLLE-----NDWQVAALSRSPSARPGVIPVAA-------DLQNP 52
Query: 70 TDTALKLSLISQEITNLFWVPLQVQESEEVNIFKNSTMLKXXXXXXXXXXXXXXXXXHVA 129
+ L+ + T++F Q +E NI N+ M++ HVA
Sbjct: 53 KSVSAALADLKP--THVFITTWSRQATEAENIRVNAAMVRNVLDAVRPAGSVK----HVA 106
Query: 130 LLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELED--VSASYSPAITYS 187
L+TG KHY+GP F+ G L P + PF+E +RL NFYY ED +A+ T+S
Sbjct: 107 LVTGLKHYLGP-FEAYGKGTL-P-QTPFRETQARLDIENFYYAQEDEVFAAAEKDGFTWS 163
Query: 188 VHRSSVIIGAS 198
VHR + G +
Sbjct: 164 VHRPHTVTGVA 174
|
|
| UNIPROTKB|Q4K649 PFL_5207 "Uncharacterized protein" [Pseudomonas protegens Pf-5 (taxid:220664)] | Back alignment and assigned GO terms |
|---|
Score = 119 (46.9 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 54/202 (26%), Positives = 83/202 (41%)
Query: 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVD-----RY 61
+P L+IG G+ G ++ E + TPG W++ AARR PP T+L+D +
Sbjct: 32 SPDRHLLVIGGYGVVGTAVVELMHR--TPG--WQLTTAARRRPP----TSLLDGSPAPAH 83
Query: 62 ITFDALDPTDTALKLSLISQEITNLFWVPLQVQESEEVNIFKNSTMLKXXXXXXXXXXXX 121
I+ D LD TA + + +T+L + +ES + N ML+
Sbjct: 84 ISADLLDVAGTARAFAGLGS-VTDLVFCAYSERESMAATVAPNLAMLEHSLKALRQAGAR 142
Query: 122 XXXXXHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDV--SAS 179
V L+ G K Y L Y+ P KE R P FY + ED+ +
Sbjct: 143 LR---QVVLIGGGKSY---------GEHLGSYKTPAKESDPRFMGPIFYNDQEDLLWHEA 190
Query: 180 YSPAITYSVHRSSVIIGASPRS 201
++V R ++G S S
Sbjct: 191 EREGFAWTVLRPDGVMGPSLNS 212
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.134 0.399 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 211 185 0.00080 110 3 11 22 0.47 32
31 0.41 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 5
No. of states in DFA: 568 (60 KB)
Total size of DFA: 149 KB (2091 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 16.39u 0.10s 16.49t Elapsed: 00:00:00
Total cpu time: 16.39u 0.10s 16.49t Elapsed: 00:00:00
Start: Fri May 10 10:21:30 2013 End: Fri May 10 10:21:30 2013
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 211 | |||
| cd08948 | 308 | cd08948, 5beta-POR_like_SDR_a, progesterone 5-beta | 1e-47 | |
| cd05226 | 176 | cd05226, SDR_e_a, Extended (e) and atypical (a) SD | 9e-11 |
| >gnl|CDD|187652 cd08948, 5beta-POR_like_SDR_a, progesterone 5-beta-reductase-like proteins (5beta-POR), atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 157 bits (400), Expect = 1e-47
Identities = 76/198 (38%), Positives = 102/198 (51%), Gaps = 17/198 (8%)
Query: 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPT 70
VAL++G TGISG +L E L + PG+ WKVYG +RRP P LV +I D LDP
Sbjct: 1 VALVVGATGISGWALVEHL--LSDPGTWWKVYGLSRRPLPTEDDPRLV-EHIGIDLLDPA 57
Query: 71 DTALKLSL-ISQEITNLFWVPLQVQESEEVNIFKNSTMLKNVLSVL--VSSNSGRSRLRH 127
DT L+ L +++T++F+ + E + N ML+N L L S N L+H
Sbjct: 58 DTVLRAKLPGLEDVTHVFYAAYIERPDEAELVEVNGAMLRNFLDALEPASPN-----LKH 112
Query: 128 VALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVSASYS--PAIT 185
V L TGTKHY + E P +ED RL PNFYY+ ED+ + T
Sbjct: 113 VVLQTGTKHYGVHLGPFKTP----RPEEPAREDPPRLLPPNFYYDQEDLLFEAAKGKGWT 168
Query: 186 YSVHRSSVIIGASPRSLY 203
+SV R IIG +P +
Sbjct: 169 WSVLRPDAIIGFAPGNAM 186
|
5beta-POR catalyzes the reduction of progesterone to 5beta-pregnane-3,20-dione in Digitalis plants. This subgroup of atypical-extended SDRs, shares the structure of an extended SDR, but has a different glycine-rich nucleotide binding motif (GXXGXXG) and lacks the YXXXK active site motif of classical and extended SDRs. Tyr-179 and Lys 147 are present in the active site, but not in the usual SDR configuration. Given these differences, it has been proposed that this subfamily represents a new SDR class. Other atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 308 |
| >gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 58.2 bits (141), Expect = 9e-11
Identities = 35/190 (18%), Positives = 56/190 (29%), Gaps = 41/190 (21%)
Query: 12 ALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFP--TALVDRYITFDALDP 69
LI+G TG G +LA L +V R + LD
Sbjct: 1 ILILGATGFIGRALARELLEQG-----HEVTLLVRNTKRLSKEDQEPVAVVEGDLRDLDS 55
Query: 70 TDTALKLSLISQEIT---NLFWVPLQVQESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLR 126
A+ Q + +L P ++ EV++ +NVL + ++
Sbjct: 56 LSDAV------QGVDVVIHLAGAPRDTRDFCEVDV----EGTRNVLEAAKEAG-----VK 100
Query: 127 HVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVSASYSPAITY 186
H ++ Y E S P+ + E V S Y
Sbjct: 101 HFIFISSLGAYGDLH--------------EETEPSPSSPYLAVKAKTEAVLREASL--PY 144
Query: 187 SVHRSSVIIG 196
++ R VI G
Sbjct: 145 TIVRPGVIYG 154
|
Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 211 | |||
| COG1087 | 329 | GalE UDP-glucose 4-epimerase [Cell envelope biogen | 99.94 | |
| PF01073 | 280 | 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso | 99.94 | |
| PRK15181 | 348 | Vi polysaccharide biosynthesis protein TviC; Provi | 99.93 | |
| PLN02214 | 342 | cinnamoyl-CoA reductase | 99.91 | |
| KOG1502 | 327 | consensus Flavonol reductase/cinnamoyl-CoA reducta | 99.91 | |
| PRK09987 | 299 | dTDP-4-dehydrorhamnose reductase; Provisional | 99.91 | |
| PLN00198 | 338 | anthocyanidin reductase; Provisional | 99.9 | |
| PLN02572 | 442 | UDP-sulfoquinovose synthase | 99.9 | |
| PLN02427 | 386 | UDP-apiose/xylose synthase | 99.9 | |
| PRK11908 | 347 | NAD-dependent epimerase/dehydratase family protein | 99.9 | |
| PLN02695 | 370 | GDP-D-mannose-3',5'-epimerase | 99.9 | |
| PF01370 | 236 | Epimerase: NAD dependent epimerase/dehydratase fam | 99.9 | |
| PLN02650 | 351 | dihydroflavonol-4-reductase | 99.9 | |
| PLN02989 | 325 | cinnamyl-alcohol dehydrogenase family protein | 99.89 | |
| PLN02986 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.89 | |
| TIGR02622 | 349 | CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member | 99.89 | |
| COG0451 | 314 | WcaG Nucleoside-diphosphate-sugar epimerases [Cell | 99.89 | |
| PRK10217 | 355 | dTDP-glucose 4,6-dehydratase; Provisional | 99.89 | |
| PRK08125 | 660 | bifunctional UDP-glucuronic acid decarboxylase/UDP | 99.88 | |
| TIGR01472 | 343 | gmd GDP-mannose 4,6-dehydratase. Excluded from thi | 99.88 | |
| PLN02662 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.88 | |
| KOG1371 | 343 | consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo | 99.88 | |
| PLN02240 | 352 | UDP-glucose 4-epimerase | 99.88 | |
| COG1088 | 340 | RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope | 99.88 | |
| TIGR03466 | 328 | HpnA hopanoid-associated sugar epimerase. The sequ | 99.88 | |
| PLN02896 | 353 | cinnamyl-alcohol dehydrogenase | 99.87 | |
| PLN02583 | 297 | cinnamoyl-CoA reductase | 99.86 | |
| PRK10675 | 338 | UDP-galactose-4-epimerase; Provisional | 99.86 | |
| KOG1430 | 361 | consensus C-3 sterol dehydrogenase/3-beta-hydroxys | 99.86 | |
| PLN02653 | 340 | GDP-mannose 4,6-dehydratase | 99.86 | |
| PLN02686 | 367 | cinnamoyl-CoA reductase | 99.86 | |
| TIGR01214 | 287 | rmlD dTDP-4-dehydrorhamnose reductase. This enzyme | 99.86 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.86 | |
| PRK11150 | 308 | rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro | 99.85 | |
| PLN02725 | 306 | GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas | 99.85 | |
| CHL00194 | 317 | ycf39 Ycf39; Provisional | 99.85 | |
| PLN02166 | 436 | dTDP-glucose 4,6-dehydratase | 99.85 | |
| PLN02206 | 442 | UDP-glucuronate decarboxylase | 99.84 | |
| TIGR01181 | 317 | dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This | 99.84 | |
| TIGR01179 | 328 | galE UDP-glucose-4-epimerase. This enzyme intercon | 99.83 | |
| PF13460 | 183 | NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X | 99.83 | |
| KOG1429 | 350 | consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro | 99.83 | |
| TIGR03589 | 324 | PseB UDP-N-acetylglucosamine 4,6-dehydratase. This | 99.83 | |
| PLN02657 | 390 | 3,8-divinyl protochlorophyllide a 8-vinyl reductas | 99.82 | |
| PRK10084 | 352 | dTDP-glucose 4,6 dehydratase; Provisional | 99.82 | |
| PF04321 | 286 | RmlD_sub_bind: RmlD substrate binding domain; Inte | 99.82 | |
| COG1091 | 281 | RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo | 99.82 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.81 | |
| TIGR02197 | 314 | heptose_epim ADP-L-glycero-D-manno-heptose-6-epime | 99.81 | |
| TIGR01777 | 292 | yfcH conserved hypothetical protein TIGR01777. Thi | 99.81 | |
| PLN00016 | 378 | RNA-binding protein; Provisional | 99.81 | |
| COG3320 | 382 | Putative dehydrogenase domain of multifunctional n | 99.8 | |
| PLN02996 | 491 | fatty acyl-CoA reductase | 99.79 | |
| PF07993 | 249 | NAD_binding_4: Male sterility protein; InterPro: I | 99.78 | |
| PLN00141 | 251 | Tic62-NAD(P)-related group II protein; Provisional | 99.77 | |
| PLN03209 | 576 | translocon at the inner envelope of chloroplast su | 99.76 | |
| TIGR01746 | 367 | Thioester-redct thioester reductase domain. It has | 99.76 | |
| COG1089 | 345 | Gmd GDP-D-mannose dehydratase [Cell envelope bioge | 99.76 | |
| PLN02778 | 298 | 3,5-epimerase/4-reductase | 99.76 | |
| PRK05865 | 854 | hypothetical protein; Provisional | 99.74 | |
| KOG0747 | 331 | consensus Putative NAD+-dependent epimerases [Carb | 99.74 | |
| PF02719 | 293 | Polysacc_synt_2: Polysaccharide biosynthesis prote | 99.73 | |
| PRK12825 | 249 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.73 | |
| PRK12320 | 699 | hypothetical protein; Provisional | 99.73 | |
| PLN02503 | 605 | fatty acyl-CoA reductase 2 | 99.73 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 99.72 | |
| PRK06482 | 276 | short chain dehydrogenase; Provisional | 99.71 | |
| PRK09135 | 249 | pteridine reductase; Provisional | 99.71 | |
| PRK12826 | 251 | 3-ketoacyl-(acyl-carrier-protein) reductase; Revie | 99.71 | |
| PRK06180 | 277 | short chain dehydrogenase; Provisional | 99.7 | |
| COG1086 | 588 | Predicted nucleoside-diphosphate sugar epimerases | 99.7 | |
| PRK13394 | 262 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.7 | |
| PRK08264 | 238 | short chain dehydrogenase; Validated | 99.7 | |
| PRK05993 | 277 | short chain dehydrogenase; Provisional | 99.69 | |
| PRK12429 | 258 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.69 | |
| PRK12745 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.68 | |
| PRK09186 | 256 | flagellin modification protein A; Provisional | 99.68 | |
| PRK07453 | 322 | protochlorophyllide oxidoreductase; Validated | 99.68 | |
| PRK05653 | 246 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.68 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.67 | |
| TIGR03649 | 285 | ergot_EASG ergot alkaloid biosynthesis protein, AF | 99.67 | |
| PRK06914 | 280 | short chain dehydrogenase; Provisional | 99.67 | |
| PRK08263 | 275 | short chain dehydrogenase; Provisional | 99.67 | |
| PRK12827 | 249 | short chain dehydrogenase; Provisional | 99.66 | |
| PRK06182 | 273 | short chain dehydrogenase; Validated | 99.66 | |
| COG1090 | 297 | Predicted nucleoside-diphosphate sugar epimerase [ | 99.66 | |
| PRK07806 | 248 | short chain dehydrogenase; Provisional | 99.66 | |
| PRK06196 | 315 | oxidoreductase; Provisional | 99.66 | |
| PRK06523 | 260 | short chain dehydrogenase; Provisional | 99.65 | |
| PRK07067 | 257 | sorbitol dehydrogenase; Provisional | 99.65 | |
| PRK07060 | 245 | short chain dehydrogenase; Provisional | 99.64 | |
| PRK12828 | 239 | short chain dehydrogenase; Provisional | 99.64 | |
| PRK12746 | 254 | short chain dehydrogenase; Provisional | 99.64 | |
| COG4221 | 246 | Short-chain alcohol dehydrogenase of unknown speci | 99.64 | |
| PRK06500 | 249 | short chain dehydrogenase; Provisional | 99.64 | |
| PRK05876 | 275 | short chain dehydrogenase; Provisional | 99.64 | |
| PRK12829 | 264 | short chain dehydrogenase; Provisional | 99.64 | |
| PRK06398 | 258 | aldose dehydrogenase; Validated | 99.63 | |
| PRK06101 | 240 | short chain dehydrogenase; Provisional | 99.63 | |
| PRK07523 | 255 | gluconate 5-dehydrogenase; Provisional | 99.63 | |
| PRK07774 | 250 | short chain dehydrogenase; Provisional | 99.63 | |
| COG0300 | 265 | DltE Short-chain dehydrogenases of various substra | 99.63 | |
| PRK06171 | 266 | sorbitol-6-phosphate 2-dehydrogenase; Provisional | 99.63 | |
| TIGR01963 | 255 | PHB_DH 3-hydroxybutyrate dehydrogenase. This model | 99.63 | |
| PRK06194 | 287 | hypothetical protein; Provisional | 99.62 | |
| PRK07666 | 239 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.62 | |
| PRK07890 | 258 | short chain dehydrogenase; Provisional | 99.62 | |
| PRK07024 | 257 | short chain dehydrogenase; Provisional | 99.62 | |
| PRK08628 | 258 | short chain dehydrogenase; Provisional | 99.62 | |
| PRK07856 | 252 | short chain dehydrogenase; Provisional | 99.62 | |
| TIGR03443 | 1389 | alpha_am_amid L-aminoadipate-semialdehyde dehydrog | 99.62 | |
| PRK06138 | 252 | short chain dehydrogenase; Provisional | 99.62 | |
| PRK07326 | 237 | short chain dehydrogenase; Provisional | 99.62 | |
| PRK12823 | 260 | benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat | 99.62 | |
| PRK05717 | 255 | oxidoreductase; Validated | 99.61 | |
| PRK08220 | 252 | 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | 99.61 | |
| PRK07454 | 241 | short chain dehydrogenase; Provisional | 99.61 | |
| TIGR03206 | 250 | benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr | 99.6 | |
| PRK06128 | 300 | oxidoreductase; Provisional | 99.6 | |
| PRK09291 | 257 | short chain dehydrogenase; Provisional | 99.6 | |
| PRK07577 | 234 | short chain dehydrogenase; Provisional | 99.6 | |
| PRK05875 | 276 | short chain dehydrogenase; Provisional | 99.6 | |
| PRK08643 | 256 | acetoin reductase; Validated | 99.6 | |
| PRK08267 | 260 | short chain dehydrogenase; Provisional | 99.59 | |
| PRK07985 | 294 | oxidoreductase; Provisional | 99.59 | |
| PRK08219 | 227 | short chain dehydrogenase; Provisional | 99.59 | |
| PRK06197 | 306 | short chain dehydrogenase; Provisional | 99.59 | |
| PRK07825 | 273 | short chain dehydrogenase; Provisional | 99.59 | |
| PRK07775 | 274 | short chain dehydrogenase; Provisional | 99.59 | |
| PRK07231 | 251 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.59 | |
| PRK06463 | 255 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.59 | |
| PRK12384 | 259 | sorbitol-6-phosphate dehydrogenase; Provisional | 99.58 | |
| PRK05693 | 274 | short chain dehydrogenase; Provisional | 99.58 | |
| PRK08265 | 261 | short chain dehydrogenase; Provisional | 99.58 | |
| KOG1431 | 315 | consensus GDP-L-fucose synthetase [Carbohydrate tr | 99.58 | |
| PRK10538 | 248 | malonic semialdehyde reductase; Provisional | 99.58 | |
| PRK12935 | 247 | acetoacetyl-CoA reductase; Provisional | 99.57 | |
| TIGR01832 | 248 | kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod | 99.57 | |
| PRK06077 | 252 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.57 | |
| PRK06123 | 248 | short chain dehydrogenase; Provisional | 99.57 | |
| PRK08017 | 256 | oxidoreductase; Provisional | 99.57 | |
| PRK07576 | 264 | short chain dehydrogenase; Provisional | 99.57 | |
| PRK08251 | 248 | short chain dehydrogenase; Provisional | 99.57 | |
| PRK06701 | 290 | short chain dehydrogenase; Provisional | 99.57 | |
| PRK12939 | 250 | short chain dehydrogenase; Provisional | 99.57 | |
| PRK12742 | 237 | oxidoreductase; Provisional | 99.57 | |
| PRK08085 | 254 | gluconate 5-dehydrogenase; Provisional | 99.57 | |
| PLN02253 | 280 | xanthoxin dehydrogenase | 99.56 | |
| PRK06198 | 260 | short chain dehydrogenase; Provisional | 99.56 | |
| PRK08063 | 250 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.56 | |
| PRK07478 | 254 | short chain dehydrogenase; Provisional | 99.56 | |
| PRK07102 | 243 | short chain dehydrogenase; Provisional | 99.56 | |
| PRK12481 | 251 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.56 | |
| PRK05557 | 248 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.56 | |
| PRK12743 | 256 | oxidoreductase; Provisional | 99.56 | |
| PRK05854 | 313 | short chain dehydrogenase; Provisional | 99.55 | |
| PRK08213 | 259 | gluconate 5-dehydrogenase; Provisional | 99.55 | |
| PRK05786 | 238 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.55 | |
| PRK06181 | 263 | short chain dehydrogenase; Provisional | 99.55 | |
| PRK05866 | 293 | short chain dehydrogenase; Provisional | 99.55 | |
| PRK06949 | 258 | short chain dehydrogenase; Provisional | 99.54 | |
| PRK07074 | 257 | short chain dehydrogenase; Provisional | 99.54 | |
| PRK06947 | 248 | glucose-1-dehydrogenase; Provisional | 99.54 | |
| PRK12824 | 245 | acetoacetyl-CoA reductase; Provisional | 99.54 | |
| PRK07063 | 260 | short chain dehydrogenase; Provisional | 99.54 | |
| PRK12936 | 245 | 3-ketoacyl-(acyl-carrier-protein) reductase NodG; | 99.54 | |
| PF05368 | 233 | NmrA: NmrA-like family; InterPro: IPR008030 NmrA i | 99.54 | |
| PRK08226 | 263 | short chain dehydrogenase; Provisional | 99.53 | |
| PRK08278 | 273 | short chain dehydrogenase; Provisional | 99.53 | |
| PRK06114 | 254 | short chain dehydrogenase; Provisional | 99.53 | |
| PRK09730 | 247 | putative NAD(P)-binding oxidoreductase; Provisiona | 99.53 | |
| PRK08589 | 272 | short chain dehydrogenase; Validated | 99.53 | |
| PRK07814 | 263 | short chain dehydrogenase; Provisional | 99.53 | |
| PRK06057 | 255 | short chain dehydrogenase; Provisional | 99.53 | |
| PRK12747 | 252 | short chain dehydrogenase; Provisional | 99.53 | |
| PRK09134 | 258 | short chain dehydrogenase; Provisional | 99.52 | |
| PRK07904 | 253 | short chain dehydrogenase; Provisional | 99.52 | |
| PRK08277 | 278 | D-mannonate oxidoreductase; Provisional | 99.52 | |
| PRK05565 | 247 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.52 | |
| PRK06841 | 255 | short chain dehydrogenase; Provisional | 99.52 | |
| PRK08339 | 263 | short chain dehydrogenase; Provisional | 99.52 | |
| PRK06550 | 235 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.51 | |
| PRK12937 | 245 | short chain dehydrogenase; Provisional | 99.51 | |
| PRK06200 | 263 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog | 99.51 | |
| PRK08993 | 253 | 2-deoxy-D-gluconate 3-dehydrogenase; Validated | 99.51 | |
| PRK05650 | 270 | short chain dehydrogenase; Provisional | 99.51 | |
| PRK06935 | 258 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.51 | |
| PRK06172 | 253 | short chain dehydrogenase; Provisional | 99.51 | |
| PRK05867 | 253 | short chain dehydrogenase; Provisional | 99.51 | |
| PRK06953 | 222 | short chain dehydrogenase; Provisional | 99.51 | |
| PRK09242 | 257 | tropinone reductase; Provisional | 99.51 | |
| PRK07035 | 252 | short chain dehydrogenase; Provisional | 99.5 | |
| PRK07023 | 243 | short chain dehydrogenase; Provisional | 99.5 | |
| PRK08703 | 239 | short chain dehydrogenase; Provisional | 99.5 | |
| PRK08177 | 225 | short chain dehydrogenase; Provisional | 99.5 | |
| PRK08642 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.5 | |
| PRK08217 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.5 | |
| PRK06124 | 256 | gluconate 5-dehydrogenase; Provisional | 99.5 | |
| PRK05872 | 296 | short chain dehydrogenase; Provisional | 99.5 | |
| PRK12938 | 246 | acetyacetyl-CoA reductase; Provisional | 99.49 | |
| PRK07062 | 265 | short chain dehydrogenase; Provisional | 99.49 | |
| PRK12744 | 257 | short chain dehydrogenase; Provisional | 99.49 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 99.49 | |
| PRK06139 | 330 | short chain dehydrogenase; Provisional | 99.49 | |
| PRK12748 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.49 | |
| COG2910 | 211 | Putative NADH-flavin reductase [General function p | 99.49 | |
| PRK06483 | 236 | dihydromonapterin reductase; Provisional | 99.48 | |
| PRK07109 | 334 | short chain dehydrogenase; Provisional | 99.48 | |
| TIGR03325 | 262 | BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro | 99.48 | |
| PRK07097 | 265 | gluconate 5-dehydrogenase; Provisional | 99.48 | |
| TIGR01830 | 239 | 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re | 99.48 | |
| PRK07677 | 252 | short chain dehydrogenase; Provisional | 99.47 | |
| PRK07832 | 272 | short chain dehydrogenase; Provisional | 99.46 | |
| PRK07069 | 251 | short chain dehydrogenase; Validated | 99.46 | |
| PRK09072 | 263 | short chain dehydrogenase; Provisional | 99.46 | |
| TIGR02415 | 254 | 23BDH acetoin reductases. One member of this famil | 99.46 | |
| PRK06924 | 251 | short chain dehydrogenase; Provisional | 99.45 | |
| KOG1205 | 282 | consensus Predicted dehydrogenase [Secondary metab | 99.45 | |
| PRK06113 | 255 | 7-alpha-hydroxysteroid dehydrogenase; Validated | 99.45 | |
| PRK08416 | 260 | 7-alpha-hydroxysteroid dehydrogenase; Provisional | 99.44 | |
| PRK07041 | 230 | short chain dehydrogenase; Provisional | 99.44 | |
| TIGR01829 | 242 | AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy | 99.44 | |
| PRK08324 | 681 | short chain dehydrogenase; Validated | 99.43 | |
| PRK06079 | 252 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.43 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.43 | |
| PRK08936 | 261 | glucose-1-dehydrogenase; Provisional | 99.43 | |
| PRK07831 | 262 | short chain dehydrogenase; Provisional | 99.42 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 99.42 | |
| PRK05884 | 223 | short chain dehydrogenase; Provisional | 99.4 | |
| PRK07578 | 199 | short chain dehydrogenase; Provisional | 99.4 | |
| TIGR02632 | 676 | RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc | 99.4 | |
| KOG4039 | 238 | consensus Serine/threonine kinase TIP30/CC3 [Signa | 99.4 | |
| PRK08945 | 247 | putative oxoacyl-(acyl carrier protein) reductase; | 99.39 | |
| PRK06125 | 259 | short chain dehydrogenase; Provisional | 99.39 | |
| PRK06505 | 271 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.39 | |
| PRK07533 | 258 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.39 | |
| KOG1221 | 467 | consensus Acyl-CoA reductase [Lipid transport and | 99.37 | |
| PRK09009 | 235 | C factor cell-cell signaling protein; Provisional | 99.37 | |
| TIGR01831 | 239 | fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas | 99.37 | |
| PRK07791 | 286 | short chain dehydrogenase; Provisional | 99.37 | |
| PRK12367 | 245 | short chain dehydrogenase; Provisional | 99.36 | |
| smart00822 | 180 | PKS_KR This enzymatic domain is part of bacterial | 99.36 | |
| COG0702 | 275 | Predicted nucleoside-diphosphate-sugar epimerases | 99.36 | |
| TIGR01289 | 314 | LPOR light-dependent protochlorophyllide reductase | 99.35 | |
| PRK07370 | 258 | enoyl-(acyl carrier protein) reductase; Validated | 99.35 | |
| KOG2865 | 391 | consensus NADH:ubiquinone oxidoreductase, NDUFA9/3 | 99.35 | |
| KOG1372 | 376 | consensus GDP-mannose 4,6 dehydratase [Carbohydrat | 99.35 | |
| PLN02780 | 320 | ketoreductase/ oxidoreductase | 99.35 | |
| PRK08340 | 259 | glucose-1-dehydrogenase; Provisional | 99.35 | |
| PRK07792 | 306 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.34 | |
| TIGR02685 | 267 | pter_reduc_Leis pteridine reductase. Pteridine red | 99.34 | |
| PRK06940 | 275 | short chain dehydrogenase; Provisional | 99.33 | |
| PRK12859 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.33 | |
| PRK07984 | 262 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.33 | |
| PRK08594 | 257 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.32 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 99.32 | |
| PRK08690 | 261 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.31 | |
| PRK08303 | 305 | short chain dehydrogenase; Provisional | 99.3 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.29 | |
| PRK08159 | 272 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.28 | |
| PRK07889 | 256 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.28 | |
| PF00106 | 167 | adh_short: short chain dehydrogenase alcohol dehyd | 99.28 | |
| PRK06997 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.28 | |
| PRK08415 | 274 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.28 | |
| PRK07424 | 406 | bifunctional sterol desaturase/short chain dehydro | 99.25 | |
| PRK08862 | 227 | short chain dehydrogenase; Provisional | 99.24 | |
| PRK05599 | 246 | hypothetical protein; Provisional | 99.23 | |
| KOG1203 | 411 | consensus Predicted dehydrogenase [Carbohydrate tr | 99.23 | |
| PRK06603 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.23 | |
| TIGR01500 | 256 | sepiapter_red sepiapterin reductase. This model de | 99.23 | |
| KOG1208 | 314 | consensus Dehydrogenases with different specificit | 99.19 | |
| PLN00015 | 308 | protochlorophyllide reductase | 99.13 | |
| PF08659 | 181 | KR: KR domain; InterPro: IPR013968 This domain is | 99.12 | |
| COG3967 | 245 | DltE Short-chain dehydrogenase involved in D-alani | 99.12 | |
| KOG1611 | 249 | consensus Predicted short chain-type dehydrogenase | 99.09 | |
| KOG1209 | 289 | consensus 1-Acyl dihydroxyacetone phosphate reduct | 99.01 | |
| KOG1200 | 256 | consensus Mitochondrial/plastidial beta-ketoacyl-A | 98.99 | |
| KOG0725 | 270 | consensus Reductases with broad range of substrate | 98.99 | |
| KOG1210 | 331 | consensus Predicted 3-ketosphinganine reductase [S | 98.96 | |
| KOG1201 | 300 | consensus Hydroxysteroid 17-beta dehydrogenase 11 | 98.96 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 98.94 | |
| COG1028 | 251 | FabG Dehydrogenases with different specificities ( | 98.93 | |
| PLN02730 | 303 | enoyl-[acyl-carrier-protein] reductase | 98.92 | |
| PRK12428 | 241 | 3-alpha-hydroxysteroid dehydrogenase; Provisional | 98.88 | |
| PRK08309 | 177 | short chain dehydrogenase; Provisional | 98.86 | |
| KOG4169 | 261 | consensus 15-hydroxyprostaglandin dehydrogenase an | 98.79 | |
| PRK06720 | 169 | hypothetical protein; Provisional | 98.74 | |
| PTZ00325 | 321 | malate dehydrogenase; Provisional | 98.71 | |
| PRK06300 | 299 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.69 | |
| cd01336 | 325 | MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli | 98.67 | |
| KOG1610 | 322 | consensus Corticosteroid 11-beta-dehydrogenase and | 98.67 | |
| KOG4288 | 283 | consensus Predicted oxidoreductase [General functi | 98.66 | |
| KOG1014 | 312 | consensus 17 beta-hydroxysteroid dehydrogenase typ | 98.65 | |
| PLN00106 | 323 | malate dehydrogenase | 98.6 | |
| PRK09620 | 229 | hypothetical protein; Provisional | 98.54 | |
| PF13561 | 241 | adh_short_C2: Enoyl-(Acyl carrier protein) reducta | 98.51 | |
| KOG1207 | 245 | consensus Diacetyl reductase/L-xylulose reductase | 98.44 | |
| COG1748 | 389 | LYS9 Saccharopine dehydrogenase and related protei | 98.38 | |
| KOG2774 | 366 | consensus NAD dependent epimerase [General functio | 98.34 | |
| PRK06732 | 229 | phosphopantothenate--cysteine ligase; Validated | 98.33 | |
| PRK05086 | 312 | malate dehydrogenase; Provisional | 98.33 | |
| TIGR00715 | 256 | precor6x_red precorrin-6x reductase. This enzyme w | 98.3 | |
| PRK05579 | 399 | bifunctional phosphopantothenoylcysteine decarboxy | 98.21 | |
| KOG1478 | 341 | consensus 3-keto sterol reductase [Lipid transport | 98.19 | |
| cd00704 | 323 | MDH Malate dehydrogenase. Malate dehydrogenase (MD | 98.18 | |
| PF03435 | 386 | Saccharop_dh: Saccharopine dehydrogenase ; InterPr | 98.16 | |
| TIGR01758 | 324 | MDH_euk_cyt malate dehydrogenase, NAD-dependent. T | 98.1 | |
| KOG1199 | 260 | consensus Short-chain alcohol dehydrogenase/3-hydr | 98.08 | |
| PRK13656 | 398 | trans-2-enoyl-CoA reductase; Provisional | 98.08 | |
| KOG1204 | 253 | consensus Predicted dehydrogenase [Secondary metab | 98.08 | |
| KOG3019 | 315 | consensus Predicted nucleoside-diphosphate sugar e | 98.07 | |
| cd01078 | 194 | NAD_bind_H4MPT_DH NADP binding domain of methylene | 98.04 | |
| PRK14982 | 340 | acyl-ACP reductase; Provisional | 97.85 | |
| TIGR02114 | 227 | coaB_strep phosphopantothenate--cysteine ligase, s | 97.72 | |
| TIGR00521 | 390 | coaBC_dfp phosphopantothenoylcysteine decarboxylas | 97.68 | |
| PRK12548 | 289 | shikimate 5-dehydrogenase; Provisional | 97.61 | |
| PLN02968 | 381 | Probable N-acetyl-gamma-glutamyl-phosphate reducta | 97.61 | |
| KOG2733 | 423 | consensus Uncharacterized membrane protein [Functi | 97.56 | |
| cd01338 | 322 | MDH_choloroplast_like Chloroplast-like malate dehy | 97.5 | |
| PRK05442 | 326 | malate dehydrogenase; Provisional | 97.43 | |
| TIGR01759 | 323 | MalateDH-SF1 malate dehydrogenase. This model repr | 97.34 | |
| cd05294 | 309 | LDH-like_MDH_nadp A lactate dehydrogenases-like st | 97.33 | |
| COG0623 | 259 | FabI Enoyl-[acyl-carrier-protein] | 97.33 | |
| PRK00066 | 315 | ldh L-lactate dehydrogenase; Reviewed | 97.2 | |
| PF00056 | 141 | Ldh_1_N: lactate/malate dehydrogenase, NAD binding | 97.19 | |
| PRK14106 | 450 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 97.19 | |
| PRK14874 | 334 | aspartate-semialdehyde dehydrogenase; Provisional | 97.15 | |
| PF01118 | 121 | Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi | 97.08 | |
| cd01337 | 310 | MDH_glyoxysomal_mitochondrial Glyoxysomal and mito | 97.07 | |
| TIGR01772 | 312 | MDH_euk_gproteo malate dehydrogenase, NAD-dependen | 97.07 | |
| PRK00436 | 343 | argC N-acetyl-gamma-glutamyl-phosphate reductase; | 97.05 | |
| PRK08664 | 349 | aspartate-semialdehyde dehydrogenase; Reviewed | 97.03 | |
| cd05291 | 306 | HicDH_like L-2-hydroxyisocapronate dehydrogenases | 97.01 | |
| COG3268 | 382 | Uncharacterized conserved protein [Function unknow | 96.99 | |
| PF04127 | 185 | DFP: DNA / pantothenate metabolism flavoprotein; I | 96.98 | |
| PRK08057 | 248 | cobalt-precorrin-6x reductase; Reviewed | 96.91 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 96.84 | |
| PRK05671 | 336 | aspartate-semialdehyde dehydrogenase; Reviewed | 96.83 | |
| COG0039 | 313 | Mdh Malate/lactate dehydrogenases [Energy producti | 96.81 | |
| TIGR01296 | 339 | asd_B aspartate-semialdehyde dehydrogenase (peptid | 96.72 | |
| PF01113 | 124 | DapB_N: Dihydrodipicolinate reductase, N-terminus; | 96.71 | |
| COG0569 | 225 | TrkA K+ transport systems, NAD-binding component [ | 96.67 | |
| PF02254 | 116 | TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg | 96.67 | |
| KOG1494 | 345 | consensus NAD-dependent malate dehydrogenase [Ener | 96.66 | |
| PLN02819 | 1042 | lysine-ketoglutarate reductase/saccharopine dehydr | 96.6 | |
| PF01488 | 135 | Shikimate_DH: Shikimate / quinate 5-dehydrogenase; | 96.57 | |
| PLN00112 | 444 | malate dehydrogenase (NADP); Provisional | 96.54 | |
| PLN02602 | 350 | lactate dehydrogenase | 96.52 | |
| KOG1198 | 347 | consensus Zinc-binding oxidoreductase [Energy prod | 96.47 | |
| TIGR01850 | 346 | argC N-acetyl-gamma-glutamyl-phosphate reductase, | 96.37 | |
| PTZ00082 | 321 | L-lactate dehydrogenase; Provisional | 96.2 | |
| TIGR01915 | 219 | npdG NADPH-dependent F420 reductase. This model re | 96.16 | |
| cd00650 | 263 | LDH_MDH_like NAD-dependent, lactate dehydrogenase- | 96.13 | |
| PLN02383 | 344 | aspartate semialdehyde dehydrogenase | 96.07 | |
| PRK06849 | 389 | hypothetical protein; Provisional | 96.01 | |
| PTZ00117 | 319 | malate dehydrogenase; Provisional | 95.95 | |
| cd05290 | 307 | LDH_3 A subgroup of L-lactate dehydrogenases. L-la | 95.9 | |
| PRK11863 | 313 | N-acetyl-gamma-glutamyl-phosphate reductase; Provi | 95.86 | |
| PRK00048 | 257 | dihydrodipicolinate reductase; Provisional | 95.84 | |
| PRK09288 | 395 | purT phosphoribosylglycinamide formyltransferase 2 | 95.83 | |
| cd05293 | 312 | LDH_1 A subgroup of L-lactate dehydrogenases. L-la | 95.83 | |
| PRK06598 | 369 | aspartate-semialdehyde dehydrogenase; Reviewed | 95.81 | |
| PLN02948 | 577 | phosphoribosylaminoimidazole carboxylase | 95.78 | |
| COG2085 | 211 | Predicted dinucleotide-binding enzymes [General fu | 95.77 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 95.71 | |
| cd08259 | 332 | Zn_ADH5 Alcohol dehydrogenases of the MDR family. | 95.71 | |
| TIGR01757 | 387 | Malate-DH_plant malate dehydrogenase, NADP-depende | 95.69 | |
| cd05292 | 308 | LDH_2 A subgroup of L-lactate dehydrogenases. L-la | 95.61 | |
| TIGR01142 | 380 | purT phosphoribosylglycinamide formyltransferase 2 | 95.6 | |
| cd05295 | 452 | MDH_like Malate dehydrogenase-like. These MDH-like | 95.58 | |
| COG0027 | 394 | PurT Formate-dependent phosphoribosylglycinamide f | 95.51 | |
| PRK04148 | 134 | hypothetical protein; Provisional | 95.5 | |
| PRK10669 | 558 | putative cation:proton antiport protein; Provision | 95.48 | |
| PRK06223 | 307 | malate dehydrogenase; Reviewed | 95.45 | |
| COG0604 | 326 | Qor NADPH:quinone reductase and related Zn-depende | 95.43 | |
| TIGR01763 | 305 | MalateDH_bact malate dehydrogenase, NAD-dependent. | 95.4 | |
| PRK07688 | 339 | thiamine/molybdopterin biosynthesis ThiF/MoeB-like | 95.36 | |
| PRK03659 | 601 | glutathione-regulated potassium-efflux system prot | 95.29 | |
| PRK08040 | 336 | putative semialdehyde dehydrogenase; Provisional | 95.26 | |
| PRK06019 | 372 | phosphoribosylaminoimidazole carboxylase ATPase su | 95.24 | |
| PRK06728 | 347 | aspartate-semialdehyde dehydrogenase; Provisional | 95.24 | |
| PRK11199 | 374 | tyrA bifunctional chorismate mutase/prephenate deh | 95.2 | |
| TIGR02853 | 287 | spore_dpaA dipicolinic acid synthetase, A subunit. | 95.17 | |
| PRK03562 | 621 | glutathione-regulated potassium-efflux system prot | 95.14 | |
| PRK08306 | 296 | dipicolinate synthase subunit A; Reviewed | 95.07 | |
| cd00300 | 300 | LDH_like L-lactate dehydrogenase-like enzymes. Mem | 95.05 | |
| TIGR00518 | 370 | alaDH alanine dehydrogenase. The family of known L | 94.97 | |
| PRK10537 | 393 | voltage-gated potassium channel; Provisional | 94.91 | |
| PRK08655 | 437 | prephenate dehydrogenase; Provisional | 94.87 | |
| KOG4022 | 236 | consensus Dihydropteridine reductase DHPR/QDPR [Am | 94.81 | |
| PRK14618 | 328 | NAD(P)H-dependent glycerol-3-phosphate dehydrogena | 94.8 | |
| COG0002 | 349 | ArgC Acetylglutamate semialdehyde dehydrogenase [A | 94.8 | |
| PRK02472 | 447 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 94.75 | |
| PRK00258 | 278 | aroE shikimate 5-dehydrogenase; Reviewed | 94.73 | |
| TIGR02825 | 325 | B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15 | 94.72 | |
| COG1004 | 414 | Ugd Predicted UDP-glucose 6-dehydrogenase [Cell en | 94.67 | |
| PRK06129 | 308 | 3-hydroxyacyl-CoA dehydrogenase; Validated | 94.58 | |
| cd08294 | 329 | leukotriene_B4_DH_like 13-PGR is a bifunctional en | 94.49 | |
| PF02571 | 249 | CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: | 94.48 | |
| TIGR00978 | 341 | asd_EA aspartate-semialdehyde dehydrogenase (non-p | 94.47 | |
| cd01075 | 200 | NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l | 94.43 | |
| cd01080 | 168 | NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of | 94.39 | |
| KOG0172 | 445 | consensus Lysine-ketoglutarate reductase/saccharop | 94.37 | |
| PRK07530 | 292 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 94.36 | |
| PRK15469 | 312 | ghrA bifunctional glyoxylate/hydroxypyruvate reduc | 94.31 | |
| TIGR01771 | 299 | L-LDH-NAD L-lactate dehydrogenase. This model repr | 94.28 | |
| PRK13982 | 475 | bifunctional SbtC-like/phosphopantothenoylcysteine | 94.25 | |
| PLN02735 | 1102 | carbamoyl-phosphate synthase | 94.22 | |
| PRK08818 | 370 | prephenate dehydrogenase; Provisional | 94.22 | |
| COG0289 | 266 | DapB Dihydrodipicolinate reductase [Amino acid tra | 94.18 | |
| PRK07236 | 386 | hypothetical protein; Provisional | 94.18 | |
| PF00070 | 80 | Pyr_redox: Pyridine nucleotide-disulphide oxidored | 94.14 | |
| PRK08229 | 341 | 2-dehydropantoate 2-reductase; Provisional | 94.07 | |
| cd01065 | 155 | NAD_bind_Shikimate_DH NAD(P) binding domain of Shi | 94.07 | |
| TIGR00507 | 270 | aroE shikimate 5-dehydrogenase. This model finds p | 94.07 | |
| PRK06249 | 313 | 2-dehydropantoate 2-reductase; Provisional | 94.06 | |
| PF02826 | 178 | 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy | 94.06 | |
| TIGR01745 | 366 | asd_gamma aspartate-semialdehyde dehydrogenase, ga | 94.03 | |
| PF10727 | 127 | Rossmann-like: Rossmann-like domain; InterPro: IPR | 94.02 | |
| PLN02928 | 347 | oxidoreductase family protein | 93.97 | |
| PLN02520 | 529 | bifunctional 3-dehydroquinate dehydratase/shikimat | 93.95 | |
| COG0136 | 334 | Asd Aspartate-semialdehyde dehydrogenase [Amino ac | 93.95 | |
| cd08266 | 342 | Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam | 93.88 | |
| COG0287 | 279 | TyrA Prephenate dehydrogenase [Amino acid transpor | 93.83 | |
| PF02737 | 180 | 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind | 93.82 | |
| PLN00203 | 519 | glutamyl-tRNA reductase | 93.81 | |
| TIGR01035 | 417 | hemA glutamyl-tRNA reductase. This enzyme, togethe | 93.8 | |
| PRK06130 | 311 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 93.74 | |
| PRK11064 | 415 | wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro | 93.71 | |
| cd08253 | 325 | zeta_crystallin Zeta-crystallin with NADP-dependen | 93.69 | |
| TIGR01851 | 310 | argC_other N-acetyl-gamma-glutamyl-phosphate reduc | 93.66 | |
| PRK07502 | 307 | cyclohexadienyl dehydrogenase; Validated | 93.64 | |
| PRK13940 | 414 | glutamyl-tRNA reductase; Provisional | 93.61 | |
| smart00859 | 122 | Semialdhyde_dh Semialdehyde dehydrogenase, NAD bin | 93.6 | |
| PF03446 | 163 | NAD_binding_2: NAD binding domain of 6-phosphogluc | 93.6 | |
| PF13380 | 116 | CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5 | 93.6 | |
| PRK07819 | 286 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 93.55 | |
| PRK08591 | 451 | acetyl-CoA carboxylase biotin carboxylase subunit; | 93.53 | |
| PRK14192 | 283 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 93.49 | |
| KOG0023 | 360 | consensus Alcohol dehydrogenase, class V [Secondar | 93.49 | |
| PRK14619 | 308 | NAD(P)H-dependent glycerol-3-phosphate dehydrogena | 93.49 | |
| cd05213 | 311 | NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain | 93.48 | |
| PRK06111 | 450 | acetyl-CoA carboxylase biotin carboxylase subunit; | 93.47 | |
| COG2130 | 340 | Putative NADP-dependent oxidoreductases [General f | 93.44 | |
| PLN02545 | 295 | 3-hydroxybutyryl-CoA dehydrogenase | 93.35 | |
| TIGR00877 | 423 | purD phosphoribosylamine--glycine ligase. This enz | 93.35 | |
| PRK12833 | 467 | acetyl-CoA carboxylase biotin carboxylase subunit; | 93.29 | |
| PLN02256 | 304 | arogenate dehydrogenase | 93.26 | |
| PRK12815 | 1068 | carB carbamoyl phosphate synthase large subunit; R | 93.24 | |
| PRK00045 | 423 | hemA glutamyl-tRNA reductase; Reviewed | 93.23 | |
| PRK06718 | 202 | precorrin-2 dehydrogenase; Reviewed | 93.22 | |
| PRK06444 | 197 | prephenate dehydrogenase; Provisional | 93.2 | |
| PRK14188 | 296 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 93.11 | |
| PRK09260 | 288 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 93.09 | |
| PRK07066 | 321 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 93.06 | |
| PRK14194 | 301 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 93.04 | |
| PRK11559 | 296 | garR tartronate semialdehyde reductase; Provisiona | 92.93 | |
| TIGR00514 | 449 | accC acetyl-CoA carboxylase, biotin carboxylase su | 92.91 | |
| cd05188 | 271 | MDR Medium chain reductase/dehydrogenase (MDR)/zin | 92.87 | |
| PRK05294 | 1066 | carB carbamoyl phosphate synthase large subunit; R | 92.87 | |
| PF12242 | 78 | Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2 | 92.87 | |
| PF13241 | 103 | NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_ | 92.86 | |
| PRK12409 | 410 | D-amino acid dehydrogenase small subunit; Provisio | 92.85 | |
| TIGR01161 | 352 | purK phosphoribosylaminoimidazole carboxylase, Pur | 92.85 | |
| cd08295 | 338 | double_bond_reductase_like Arabidopsis alkenal dou | 92.84 | |
| PRK12475 | 338 | thiamine/molybdopterin biosynthesis MoeB-like prot | 92.82 | |
| PF03721 | 185 | UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen | 92.79 | |
| cd05288 | 329 | PGDH Prostaglandin dehydrogenases. Prostaglandins | 92.7 | |
| PRK06395 | 435 | phosphoribosylamine--glycine ligase; Provisional | 92.63 | |
| TIGR02355 | 240 | moeB molybdopterin synthase sulfurylase MoeB. This | 92.46 | |
| PRK06035 | 291 | 3-hydroxyacyl-CoA dehydrogenase; Validated | 92.46 | |
| cd01339 | 300 | LDH-like_MDH L-lactate dehydrogenase-like malate d | 92.44 | |
| PRK08773 | 392 | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hy | 92.43 | |
| PRK06719 | 157 | precorrin-2 dehydrogenase; Validated | 92.42 | |
| PRK12767 | 326 | carbamoyl phosphate synthase-like protein; Provisi | 92.42 | |
| COG0111 | 324 | SerA Phosphoglycerate dehydrogenase and related de | 92.4 | |
| KOG1202 | 2376 | consensus Animal-type fatty acid synthase and rela | 92.32 | |
| cd01492 | 197 | Aos1_SUMO Ubiquitin activating enzyme (E1) subunit | 92.28 | |
| PLN02775 | 286 | Probable dihydrodipicolinate reductase | 92.16 | |
| PRK14175 | 286 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 92.08 | |
| ), forming GARS-AIRS-GART. This entry represents the N-domain, which is related to the N-terminal domain of biotin carboxylase/carbamoyl phosphate synthetase (IPR005481 from INTERPRO).; GO: 0004637 phosphoribosylamine-glycine ligase activity, 0009113 purine base biosynthetic process; PDB: 3MJF_A 2XD4_A 2XCL_A 2IP4_A 2YW2_B 2YYA_A 3LP8_A 1VKZ_A 2YS6_A 2YRX_A ...." target="_blank" href="http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=PF02844">PF02844 | 100 | GARS_N: Phosphoribosylglycinamide synthetase, N do | 92.07 | |
| COG2099 | 257 | CobK Precorrin-6x reductase [Coenzyme metabolism] | 92.02 | |
| PRK07531 | 495 | bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioe | 91.96 | |
| PRK05808 | 282 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 91.94 | |
| COG0026 | 375 | PurK Phosphoribosylaminoimidazole carboxylase (NCA | 91.89 | |
| PRK11880 | 267 | pyrroline-5-carboxylate reductase; Reviewed | 91.82 | |
| PRK06522 | 304 | 2-dehydropantoate 2-reductase; Reviewed | 91.82 | |
| cd00755 | 231 | YgdL_like Family of activating enzymes (E1) of ubi | 91.77 | |
| PRK07417 | 279 | arogenate dehydrogenase; Reviewed | 91.76 | |
| PRK08410 | 311 | 2-hydroxyacid dehydrogenase; Provisional | 91.73 | |
| COG1052 | 324 | LdhA Lactate dehydrogenase and related dehydrogena | 91.66 | |
| PF03807 | 96 | F420_oxidored: NADP oxidoreductase coenzyme F420-d | 91.64 | |
| PRK09880 | 343 | L-idonate 5-dehydrogenase; Provisional | 91.6 | |
| PRK08293 | 287 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 91.6 | |
| cd08293 | 345 | PTGR2 Prostaglandin reductase. Prostaglandins and | 91.55 | |
| TIGR02356 | 202 | adenyl_thiF thiazole biosynthesis adenylyltransfer | 91.54 | |
| PRK13243 | 333 | glyoxylate reductase; Reviewed | 91.48 | |
| PRK07574 | 385 | formate dehydrogenase; Provisional | 91.43 | |
| PRK08163 | 396 | salicylate hydroxylase; Provisional | 91.38 | |
| PRK06185 | 407 | hypothetical protein; Provisional | 91.34 |
| >COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.1e-26 Score=184.53 Aligned_cols=164 Identities=15% Similarity=0.125 Sum_probs=134.6
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-CCCCC-ceeEEEeeCCCHHHHHHHHHhcccccceEE
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-FPTAL-VDRYITFDALDPTDTALKLSLISQEITNLF 87 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-~~~~~-~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~ 87 (211)
++||||||+||||+|.|.+|+ +.||+|+++++-..... ..... .+ ++.+|+.|.+.+.+.|+..+ |+.|+
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll-----~~G~~vvV~DNL~~g~~~~v~~~~~~-f~~gDi~D~~~L~~vf~~~~--idaVi 72 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLL-----KTGHEVVVLDNLSNGHKIALLKLQFK-FYEGDLLDRALLTAVFEENK--IDAVV 72 (329)
T ss_pred CeEEEecCcchhHHHHHHHHH-----HCCCeEEEEecCCCCCHHHhhhccCc-eEEeccccHHHHHHHHHhcC--CCEEE
Confidence 469999999999999999999 79999999998544321 11111 57 99999999999999999876 89999
Q ss_pred eecccCC-----chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCCC
Q 028258 88 WVPLQVQ-----ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSS 162 (211)
Q Consensus 88 ~~a~~~~-----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~~ 162 (211)
|+|+... ..+.++++.|+.+|.+|+++|+++ ++++|+|+||+.+||.|. ..|++|+.|
T Consensus 73 HFAa~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~-----gv~~~vFSStAavYG~p~------------~~PI~E~~~ 135 (329)
T COG1087 73 HFAASISVGESVQNPLKYYDNNVVGTLNLIEAMLQT-----GVKKFIFSSTAAVYGEPT------------TSPISETSP 135 (329)
T ss_pred ECccccccchhhhCHHHHHhhchHhHHHHHHHHHHh-----CCCEEEEecchhhcCCCC------------CcccCCCCC
Confidence 9998754 367789999999999999999998 789999999999999763 579999998
Q ss_pred CCCCCCcch-----hHHHHHhh--cCCCceEEEecCCceEecCCC
Q 028258 163 RLPFPNFYY-----ELEDVSAS--YSPAITYSVHRSSVIIGASPR 200 (211)
Q Consensus 163 ~~~~~~~~~-----~~e~~l~~--~~~~~~~~i~Rp~~i~G~~~~ 200 (211)
.. |...| ..|+.|.+ ...+|+++++|-+++-|..+.
T Consensus 136 ~~--p~NPYG~sKlm~E~iL~d~~~a~~~~~v~LRYFN~aGA~~~ 178 (329)
T COG1087 136 LA--PINPYGRSKLMSEEILRDAAKANPFKVVILRYFNVAGACPD 178 (329)
T ss_pred CC--CCCcchhHHHHHHHHHHHHHHhCCCcEEEEEecccccCCCC
Confidence 64 43333 34666665 567799999999998888764
|
|
| >PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.2e-25 Score=184.09 Aligned_cols=170 Identities=19% Similarity=0.215 Sum_probs=125.1
Q ss_pred EEEcCCChHHHHHHHHhhCCCCCCCC--cEEEEEeCCCCCCC----CCCCCceeEEEeeCCCHHHHHHHHHhcccccceE
Q 028258 13 LIIGVTGISGLSLAEALKNPTTPGSP--WKVYGAARRPPPGW----FPTALVDRYITFDALDPTDTALKLSLISQEITNL 86 (211)
Q Consensus 13 lVtGatG~iG~~l~~~L~~~~~~~~g--~~V~~~~R~~~~~~----~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v 86 (211)
||||||||+|++|+++|+ ++| ++|.+++|++.... ...+..+ ++.+|++|++++.+++++ +|.|
T Consensus 1 LVTGgsGflG~~iv~~Ll-----~~g~~~~Vr~~d~~~~~~~~~~~~~~~~~~-~~~~Di~d~~~l~~a~~g----~d~V 70 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLL-----ERGYIYEVRVLDRSPPPKFLKDLQKSGVKE-YIQGDITDPESLEEALEG----VDVV 70 (280)
T ss_pred CEEcCCcHHHHHHHHHHH-----HCCCceEEEEcccccccccchhhhccccee-EEEeccccHHHHHHHhcC----CceE
Confidence 699999999999999999 577 78999998765432 1224455 889999999999999998 5789
Q ss_pred EeecccCCc----hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCCC
Q 028258 87 FWVPLQVQE----SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSS 162 (211)
Q Consensus 87 ~~~a~~~~~----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~~ 162 (211)
||+|+.... ..+..+++|+.||+|++++|++. ++++|||+||..+++.... +. +-...+|+.|
T Consensus 71 ~H~Aa~~~~~~~~~~~~~~~vNV~GT~nvl~aa~~~-----~VkrlVytSS~~vv~~~~~-----~~---~~~~~dE~~~ 137 (280)
T PF01073_consen 71 FHTAAPVPPWGDYPPEEYYKVNVDGTRNVLEAARKA-----GVKRLVYTSSISVVFDNYK-----GD---PIINGDEDTP 137 (280)
T ss_pred EEeCccccccCcccHHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEEcCcceeEeccC-----CC---CcccCCcCCc
Confidence 999986432 45568899999999999999987 7999999999998864110 10 0112356555
Q ss_pred CCCCCCcchhHHHHHhh------cC------CCceEEEecCCceEecCCCCCCCC
Q 028258 163 RLPFPNFYYELEDVSAS------YS------PAITYSVHRSSVIIGASPRSLYXX 205 (211)
Q Consensus 163 ~~~~~~~~~~~e~~l~~------~~------~~~~~~i~Rp~~i~G~~~~~~~~~ 205 (211)
....+...|...|.+.| .. ..+.+++|||+.||||+...+...
T Consensus 138 ~~~~~~~~Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~~ 192 (280)
T PF01073_consen 138 YPSSPLDPYAESKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQRLVPR 192 (280)
T ss_pred ccccccCchHHHHHHHHHHHHhhcccccccccceeEEEEeccEEeCcccccccch
Confidence 43333445554444433 11 248999999999999998665443
|
3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process |
| >PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.8e-25 Score=187.32 Aligned_cols=163 Identities=16% Similarity=0.046 Sum_probs=123.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC------------CCCCCceeEEEeeCCCHHHHHHH
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW------------FPTALVDRYITFDALDPTDTALK 75 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~------------~~~~~~~~~i~~Dl~d~~~~~~~ 75 (211)
.+|+|||||||||||++|+++|+ ++|++|++++|...... .....++ ++.+|+.|.+.+...
T Consensus 14 ~~~~vlVtGatGfiG~~lv~~L~-----~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Di~d~~~l~~~ 87 (348)
T PRK15181 14 APKRWLITGVAGFIGSGLLEELL-----FLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFI-FIQGDIRKFTDCQKA 87 (348)
T ss_pred cCCEEEEECCccHHHHHHHHHHH-----HCCCEEEEEeCCCCcchhhhhhhhhccccccCCceE-EEEccCCCHHHHHHH
Confidence 34789999999999999999999 68999999998643210 0013578 899999999888888
Q ss_pred HHhcccccceEEeecccCC-----chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCC
Q 028258 76 LSLISQEITNLFWVPLQVQ-----ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQL 150 (211)
Q Consensus 76 ~~~~~~~~~~v~~~a~~~~-----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~ 150 (211)
+++ +|+|||+|+... .++...+++|+.++.++++++++. ++++|+++||+.+|+...
T Consensus 88 ~~~----~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~-----~~~~~v~~SS~~vyg~~~--------- 149 (348)
T PRK15181 88 CKN----VDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDA-----HVSSFTYAASSSTYGDHP--------- 149 (348)
T ss_pred hhC----CCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHc-----CCCeEEEeechHhhCCCC---------
Confidence 775 789999998643 234567899999999999999886 678999999999997421
Q ss_pred CCCCCCCcCCCCCCCCCCcchhHHH-----HHhh--cCCCceEEEecCCceEecCC
Q 028258 151 MPYEVPFKEDSSRLPFPNFYYELED-----VSAS--YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 151 ~~~~~~~~e~~~~~~~~~~~~~~e~-----~l~~--~~~~~~~~i~Rp~~i~G~~~ 199 (211)
+.+..|+++. .|...|...| ++.. ...+++++++||+.+|||+.
T Consensus 150 ---~~~~~e~~~~--~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~vyGp~~ 200 (348)
T PRK15181 150 ---DLPKIEERIG--RPLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNVFGRRQ 200 (348)
T ss_pred ---CCCCCCCCCC--CCCChhhHHHHHHHHHHHHHHHHhCCCEEEEEecceeCcCC
Confidence 2445565543 2333344333 3332 34689999999999999975
|
|
| >PLN02214 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.2e-23 Score=176.76 Aligned_cols=169 Identities=14% Similarity=0.136 Sum_probs=126.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC------C--CCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW------F--PTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~------~--~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
++++|||||||||||++|+++|+ ++||+|+++.|+..... . ....++ ++.+|++|++.+.+++++
T Consensus 9 ~~~~vlVTGatGfIG~~l~~~L~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~~~~~~~~- 81 (342)
T PLN02214 9 AGKTVCVTGAGGYIASWIVKILL-----ERGYTVKGTVRNPDDPKNTHLRELEGGKERLI-LCKADLQDYEALKAAIDG- 81 (342)
T ss_pred CCCEEEEECCCcHHHHHHHHHHH-----HCcCEEEEEeCCchhhhHHHHHHhhCCCCcEE-EEecCcCChHHHHHHHhc-
Confidence 45789999999999999999999 68999999999755310 0 113578 899999999999988886
Q ss_pred ccccceEEeecccCCchhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC-eeeecccCCccccCCCCCCCCCCc
Q 028258 80 SQEITNLFWVPLQVQESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT-KHYMGPIFDPSLAGQLMPYEVPFK 158 (211)
Q Consensus 80 ~~~~~~v~~~a~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~-~~y~~~~~~~~~~g~~~~~~~~~~ 158 (211)
+|+|||+|+....++...+++|+.++.++++++.+. ++++|+++||. .+|+.+.. . ...+++
T Consensus 82 ---~d~Vih~A~~~~~~~~~~~~~nv~gt~~ll~aa~~~-----~v~r~V~~SS~~avyg~~~~-----~----~~~~~~ 144 (342)
T PLN02214 82 ---CDGVFHTASPVTDDPEQMVEPAVNGAKFVINAAAEA-----KVKRVVITSSIGAVYMDPNR-----D----PEAVVD 144 (342)
T ss_pred ---CCEEEEecCCCCCCHHHHHHHHHHHHHHHHHHHHhc-----CCCEEEEeccceeeeccCCC-----C----CCcccC
Confidence 689999998766677788899999999999999886 57899999985 68874321 0 112456
Q ss_pred CCCCCC----CCCCcchhHHH-----HHhh--cCCCceEEEecCCceEecCCC
Q 028258 159 EDSSRL----PFPNFYYELED-----VSAS--YSPAITYSVHRSSVIIGASPR 200 (211)
Q Consensus 159 e~~~~~----~~~~~~~~~e~-----~l~~--~~~~~~~~i~Rp~~i~G~~~~ 200 (211)
|+++.. ..|...|...| ++.. +..+++++++||+.+|||+..
T Consensus 145 E~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~g~~~v~lRp~~vyGp~~~ 197 (342)
T PLN02214 145 ESCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKEKGVDLVVLNPVLVLGPPLQ 197 (342)
T ss_pred cccCCChhhccccccHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCC
Confidence 664210 11333444433 3333 346999999999999999753
|
|
| >KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.5e-23 Score=173.08 Aligned_cols=177 Identities=17% Similarity=0.166 Sum_probs=130.4
Q ss_pred ccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------C--CCCCceeEEEeeCCCHHHHHH
Q 028258 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------F--PTALVDRYITFDALDPTDTAL 74 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~--~~~~~~~~i~~Dl~d~~~~~~ 74 (211)
|..+++++|+|||||||||+||+++|+ .+||.|+++.|++.... + ...+++ .+..|++|++++.+
T Consensus 1 m~~~~~~~VcVTGAsGfIgswivk~LL-----~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~-l~~aDL~d~~sf~~ 74 (327)
T KOG1502|consen 1 MDQDEGKKVCVTGASGFIGSWIVKLLL-----SRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLK-LFKADLLDEGSFDK 74 (327)
T ss_pred CCCCCCcEEEEeCCchHHHHHHHHHHH-----hCCCEEEEEEcCcchhhhHHHHHhcccCcccce-EEeccccccchHHH
Confidence 344467899999999999999999999 79999999999887521 1 234588 99999999999999
Q ss_pred HHHhcccccceEEeecccCCc----hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCC
Q 028258 75 KLSLISQEITNLFWVPLQVQE----SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQL 150 (211)
Q Consensus 75 ~~~~~~~~~~~v~~~a~~~~~----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~ 150 (211)
++++ +|.|||+|..... .+.+..+..+.|+.|++++|.+. . .++|||++||...-..+.. ..+
T Consensus 75 ai~g----cdgVfH~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~---~-sVkrvV~TSS~aAv~~~~~---~~~-- 141 (327)
T KOG1502|consen 75 AIDG----CDGVFHTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKT---K-SVKRVVYTSSTAAVRYNGP---NIG-- 141 (327)
T ss_pred HHhC----CCEEEEeCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhcc---C-CcceEEEeccHHHhccCCc---CCC--
Confidence 9998 6889999987543 23367888999999999999997 3 6999999998654321100 111
Q ss_pred CCCCCCCcCCCCCCC----CCCcchhHHHHHhh-------cCCCceEEEecCCceEecCCCC
Q 028258 151 MPYEVPFKEDSSRLP----FPNFYYELEDVSAS-------YSPAITYSVHRSSVIIGASPRS 201 (211)
Q Consensus 151 ~~~~~~~~e~~~~~~----~~~~~~~~e~~l~~-------~~~~~~~~i~Rp~~i~G~~~~~ 201 (211)
....++|++-... .....|...|.+.| .+.+++.+++.|+.|+||..-.
T Consensus 142 --~~~vvdE~~wsd~~~~~~~~~~Y~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~ 201 (327)
T KOG1502|consen 142 --ENSVVDEESWSDLDFCRCKKLWYALSKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQP 201 (327)
T ss_pred --CCcccccccCCcHHHHHhhHHHHHHHHHHHHHHHHHHHHhCCccEEEecCCceECCCccc
Confidence 2345666552100 01234554454444 3568999999999999998744
|
|
| >PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.4e-23 Score=173.43 Aligned_cols=153 Identities=15% Similarity=0.150 Sum_probs=117.4
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccceEEeec
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITNLFWVP 90 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~~~a 90 (211)
+||||||+||||++++++|+ +.| +|++++|+.. .+.+|++|++.+.+.+++.+ +|.|||||
T Consensus 2 ~iLVtG~~GfiGs~l~~~L~-----~~g-~V~~~~~~~~-----------~~~~Dl~d~~~~~~~~~~~~--~D~Vih~A 62 (299)
T PRK09987 2 NILLFGKTGQVGWELQRALA-----PLG-NLIALDVHST-----------DYCGDFSNPEGVAETVRKIR--PDVIVNAA 62 (299)
T ss_pred eEEEECCCCHHHHHHHHHhh-----ccC-CEEEeccccc-----------cccCCCCCHHHHHHHHHhcC--CCEEEECC
Confidence 69999999999999999999 577 6988887632 44689999999999988764 79999999
Q ss_pred ccCCc-----hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCCCCCC
Q 028258 91 LQVQE-----SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLP 165 (211)
Q Consensus 91 ~~~~~-----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~~~~~ 165 (211)
+.... ++...+++|+.++.++++++++. +. +++++||..+|++.. ..|++|+++.
T Consensus 63 a~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~-----g~-~~v~~Ss~~Vy~~~~------------~~p~~E~~~~-- 122 (299)
T PRK09987 63 AHTAVDKAESEPEFAQLLNATSVEAIAKAANEV-----GA-WVVHYSTDYVFPGTG------------DIPWQETDAT-- 122 (299)
T ss_pred ccCCcchhhcCHHHHHHHHHHHHHHHHHHHHHc-----CC-eEEEEccceEECCCC------------CCCcCCCCCC--
Confidence 87543 33456789999999999999987 33 689999999997531 3578888763
Q ss_pred CCCcchhHHHHHhh---cCCCceEEEecCCceEecCCCCC
Q 028258 166 FPNFYYELEDVSAS---YSPAITYSVHRSSVIIGASPRSL 202 (211)
Q Consensus 166 ~~~~~~~~e~~l~~---~~~~~~~~i~Rp~~i~G~~~~~~ 202 (211)
.|...|...|+..| .....+++|+||+++|||+..++
T Consensus 123 ~P~~~Yg~sK~~~E~~~~~~~~~~~ilR~~~vyGp~~~~~ 162 (299)
T PRK09987 123 APLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNF 162 (299)
T ss_pred CCCCHHHHHHHHHHHHHHHhCCCEEEEecceecCCCCCCH
Confidence 34455554454444 22345789999999999875443
|
|
| >PLN00198 anthocyanidin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.3e-22 Score=171.40 Aligned_cols=178 Identities=17% Similarity=0.144 Sum_probs=125.3
Q ss_pred CccccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------C-CCCCceeEEEeeCCCHHHH
Q 028258 1 MEKQDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------F-PTALVDRYITFDALDPTDT 72 (211)
Q Consensus 1 ~~~~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~-~~~~~~~~i~~Dl~d~~~~ 72 (211)
|.-.+.+++++|||||||||||++|+++|+ ++|++|+++.|+..... . ..++++ ++.+|++|++.+
T Consensus 1 ~~~~~~~~~~~vlItG~~GfIG~~l~~~L~-----~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~~ 74 (338)
T PLN00198 1 MATLTPTGKKTACVIGGTGFLASLLIKLLL-----QKGYAVNTTVRDPENQKKIAHLRALQELGDLK-IFGADLTDEESF 74 (338)
T ss_pred CCcccCCCCCeEEEECCchHHHHHHHHHHH-----HCCCEEEEEECCCCCHHHHHHHHhcCCCCceE-EEEcCCCChHHH
Confidence 444556667899999999999999999999 68999999988754310 1 113588 999999999988
Q ss_pred HHHHHhcccccceEEeecccCC---chh-HHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccC
Q 028258 73 ALKLSLISQEITNLFWVPLQVQ---ESE-EVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAG 148 (211)
Q Consensus 73 ~~~~~~~~~~~~~v~~~a~~~~---~~~-~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g 148 (211)
.+.+++ +|+|||+|+... .++ ...+++|+.++.++++++.+. .++++|+++||..+|+.... .+
T Consensus 75 ~~~~~~----~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~----~~~~~~v~~SS~~~~g~~~~----~~ 142 (338)
T PLN00198 75 EAPIAG----CDLVFHVATPVNFASEDPENDMIKPAIQGVHNVLKACAKA----KSVKRVILTSSAAAVSINKL----SG 142 (338)
T ss_pred HHHHhc----CCEEEEeCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEeecceeeeccCC----CC
Confidence 888875 689999998632 122 235689999999999999875 24789999999999974210 01
Q ss_pred CCCCCCCCCcCCCC-------CCCCCCcchhHHH-----HHhh--cCCCceEEEecCCceEecCCC
Q 028258 149 QLMPYEVPFKEDSS-------RLPFPNFYYELED-----VSAS--YSPAITYSVHRSSVIIGASPR 200 (211)
Q Consensus 149 ~~~~~~~~~~e~~~-------~~~~~~~~~~~e~-----~l~~--~~~~~~~~i~Rp~~i~G~~~~ 200 (211)
. ..+.+|+.. ....|...|...| ++.. +..+++++++||+.+|||+.+
T Consensus 143 ~----~~~~~E~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~~ 204 (338)
T PLN00198 143 T----GLVMNEKNWTDVEFLTSEKPPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPSLT 204 (338)
T ss_pred C----CceeccccCCchhhhhhcCCccchhHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCCcc
Confidence 0 123333310 0012333344433 3333 346899999999999999753
|
|
| >PLN02572 UDP-sulfoquinovose synthase | Back alignment and domain information |
|---|
Probab=99.90 E-value=8e-23 Score=178.72 Aligned_cols=171 Identities=16% Similarity=0.065 Sum_probs=119.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC---CCC---------------------CCCCCceeEEE
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP---PGW---------------------FPTALVDRYIT 63 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~---~~~---------------------~~~~~~~~~i~ 63 (211)
++++|||||||||||++|+++|+ ++|++|++++|... ... ....+++ ++.
T Consensus 46 ~~k~VLVTGatGfIGs~Lv~~L~-----~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~-~v~ 119 (442)
T PLN02572 46 KKKKVMVIGGDGYCGWATALHLS-----KRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIE-LYV 119 (442)
T ss_pred cCCEEEEECCCcHHHHHHHHHHH-----HCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcce-EEE
Confidence 45789999999999999999999 68999999875221 100 0013688 999
Q ss_pred eeCCCHHHHHHHHHhcccccceEEeecccCCc-----h---hHHHHhhcHHHHHHHHHHHHhcCCCCCCce-EEEEeecC
Q 028258 64 FDALDPTDTALKLSLISQEITNLFWVPLQVQE-----S---EEVNIFKNSTMLKNVLSVLVSSNSGRSRLR-HVALLTGT 134 (211)
Q Consensus 64 ~Dl~d~~~~~~~~~~~~~~~~~v~~~a~~~~~-----~---~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~-~~~~~s~~ 134 (211)
+|++|++.+.+++++.. +|+|||+|+.... + +...+++|+.++.+++++++.. +++ +|+++||.
T Consensus 120 ~Dl~d~~~v~~~l~~~~--~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~-----gv~~~~V~~SS~ 192 (442)
T PLN02572 120 GDICDFEFLSEAFKSFE--PDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEF-----APDCHLVKLGTM 192 (442)
T ss_pred CCCCCHHHHHHHHHhCC--CCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHh-----CCCccEEEEecc
Confidence 99999999999998764 7999999976332 1 1234688999999999999886 454 89999999
Q ss_pred eeeecccCCccccCCCCCCCCCCc------CCCC-CCCCCCcchhHHHHHhh-------cCCCceEEEecCCceEecCC
Q 028258 135 KHYMGPIFDPSLAGQLMPYEVPFK------EDSS-RLPFPNFYYELEDVSAS-------YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 135 ~~y~~~~~~~~~~g~~~~~~~~~~------e~~~-~~~~~~~~~~~e~~l~~-------~~~~~~~~i~Rp~~i~G~~~ 199 (211)
.+||.+.. .. ++.+++ |+++ ....|...|...|...+ +..+++++++||+.+|||+.
T Consensus 193 ~vYG~~~~---~~-----~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~ 263 (442)
T PLN02572 193 GEYGTPNI---DI-----EEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRT 263 (442)
T ss_pred eecCCCCC---CC-----cccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCC
Confidence 99985311 00 111221 2221 11223334444333322 35699999999999999975
|
|
| >PLN02427 UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Probab=99.90 E-value=9.4e-23 Score=175.43 Aligned_cols=169 Identities=14% Similarity=0.096 Sum_probs=117.2
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCC-CcEEEEEeCCCCCCC--------CCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGS-PWKVYGAARRPPPGW--------FPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~-g~~V~~~~R~~~~~~--------~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
.++|||||||||||++|+++|+ ++ |++|++++|+..+.. ...++++ ++.+|++|.+.+.+++++
T Consensus 14 ~~~VlVTGgtGfIGs~lv~~L~-----~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~-~~~~Dl~d~~~l~~~~~~- 86 (386)
T PLN02427 14 PLTICMIGAGGFIGSHLCEKLM-----TETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQ-FHRINIKHDSRLEGLIKM- 86 (386)
T ss_pred CcEEEEECCcchHHHHHHHHHH-----hcCCCEEEEEecCchhhhhhhccccccCCCCeE-EEEcCCCChHHHHHHhhc-
Confidence 4579999999999999999999 45 699999998654211 0124689 999999999998888875
Q ss_pred ccccceEEeecccCCc-----hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCC
Q 028258 80 SQEITNLFWVPLQVQE-----SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYE 154 (211)
Q Consensus 80 ~~~~~~v~~~a~~~~~-----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~ 154 (211)
+|+|||+|+.... ++.+.+..|+.++.++++++++. + ++|+++||..+||.....+ .. ..
T Consensus 87 ---~d~ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~-----~-~r~v~~SS~~vYg~~~~~~--~~----e~ 151 (386)
T PLN02427 87 ---ADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSEN-----N-KRLIHFSTCEVYGKTIGSF--LP----KD 151 (386)
T ss_pred ---CCEEEEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhc-----C-CEEEEEeeeeeeCCCcCCC--CC----cc
Confidence 6899999986432 23355678999999999999875 3 6899999999998531100 00 01
Q ss_pred CCC---------cCCCCCC---C--CCCcchhHHHHHhh-------cCCCceEEEecCCceEecCC
Q 028258 155 VPF---------KEDSSRL---P--FPNFYYELEDVSAS-------YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 155 ~~~---------~e~~~~~---~--~~~~~~~~e~~l~~-------~~~~~~~~i~Rp~~i~G~~~ 199 (211)
.|. +|+.+.. + .+.+.|...|...+ +..+++++++||+.+||++.
T Consensus 152 ~p~~~~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~ 217 (386)
T PLN02427 152 HPLRQDPAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRM 217 (386)
T ss_pred cccccccccccccccccccccCCCCccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCCC
Confidence 121 2221100 0 12233444343333 34689999999999999973
|
|
| >PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=6.6e-23 Score=173.94 Aligned_cols=163 Identities=14% Similarity=0.184 Sum_probs=118.9
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC--CCCCCCceeEEEeeCC-CHHHHHHHHHhcccccceE
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG--WFPTALVDRYITFDAL-DPTDTALKLSLISQEITNL 86 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~--~~~~~~~~~~i~~Dl~-d~~~~~~~~~~~~~~~~~v 86 (211)
++|||||||||||++|+++|++ +.||+|++++|+.... ....++++ ++.+|++ +.+.+.+++++ +|+|
T Consensus 2 ~~ilVtGatGfiGs~l~~~L~~----~~~~~V~~~~r~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~----~d~V 72 (347)
T PRK11908 2 KKVLILGVNGFIGHHLSKRILE----TTDWEVYGMDMQTDRLGDLVNHPRMH-FFEGDITINKEWIEYHVKK----CDVI 72 (347)
T ss_pred cEEEEECCCcHHHHHHHHHHHh----CCCCeEEEEeCcHHHHHHhccCCCeE-EEeCCCCCCHHHHHHHHcC----CCEE
Confidence 4699999999999999999993 3479999999865421 11235688 9999998 66666666664 7899
Q ss_pred EeecccCCc-----hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCC
Q 028258 87 FWVPLQVQE-----SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDS 161 (211)
Q Consensus 87 ~~~a~~~~~-----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~ 161 (211)
||+|+...+ ++...+++|+.++.++++++++. + ++|+++||+.+||... ..+++|+.
T Consensus 73 iH~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~-----~-~~~v~~SS~~vyg~~~------------~~~~~ee~ 134 (347)
T PRK11908 73 LPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKY-----G-KHLVFPSTSEVYGMCP------------DEEFDPEA 134 (347)
T ss_pred EECcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhc-----C-CeEEEEecceeeccCC------------CcCcCccc
Confidence 999986432 45567899999999999999875 3 6899999999997421 12445543
Q ss_pred CCC-----CCCCcchhHHHHHhh-------cCCCceEEEecCCceEecCC
Q 028258 162 SRL-----PFPNFYYELEDVSAS-------YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 162 ~~~-----~~~~~~~~~e~~l~~-------~~~~~~~~i~Rp~~i~G~~~ 199 (211)
+.. ..|...|...|...+ +..+++++++||+.+||++.
T Consensus 135 ~~~~~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilR~~~v~Gp~~ 184 (347)
T PRK11908 135 SPLVYGPINKPRWIYACSKQLMDRVIWAYGMEEGLNFTLFRPFNWIGPGL 184 (347)
T ss_pred cccccCcCCCccchHHHHHHHHHHHHHHHHHHcCCCeEEEeeeeeeCCCc
Confidence 211 123444554444333 35789999999999999975
|
|
| >PLN02695 GDP-D-mannose-3',5'-epimerase | Back alignment and domain information |
|---|
Probab=99.90 E-value=9.5e-23 Score=174.63 Aligned_cols=171 Identities=15% Similarity=0.102 Sum_probs=122.0
Q ss_pred CCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCC-CCCCceeEEEeeCCCHHHHHHHHHhcccccc
Q 028258 6 QNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF-PTALVDRYITFDALDPTDTALKLSLISQEIT 84 (211)
Q Consensus 6 ~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~-~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~ 84 (211)
++.+|+|||||||||||++++++|. ++||+|++++|+...... .....+ ++.+|++|.+.+...+++ +|
T Consensus 18 ~~~~~~IlVtGgtGfIG~~l~~~L~-----~~G~~V~~v~r~~~~~~~~~~~~~~-~~~~Dl~d~~~~~~~~~~----~D 87 (370)
T PLN02695 18 PSEKLRICITGAGGFIASHIARRLK-----AEGHYIIASDWKKNEHMSEDMFCHE-FHLVDLRVMENCLKVTKG----VD 87 (370)
T ss_pred CCCCCEEEEECCccHHHHHHHHHHH-----hCCCEEEEEEeccccccccccccce-EEECCCCCHHHHHHHHhC----CC
Confidence 4457889999999999999999999 689999999986542111 112357 889999999887777764 78
Q ss_pred eEEeecccCC------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCc
Q 028258 85 NLFWVPLQVQ------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFK 158 (211)
Q Consensus 85 ~v~~~a~~~~------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~ 158 (211)
+|||+|+... .++...+..|+.++.++++++++. ++++|+++||+.+|+.... . +...++.
T Consensus 88 ~Vih~Aa~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~-----~vk~~V~~SS~~vYg~~~~-----~---~~~~~~~ 154 (370)
T PLN02695 88 HVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARIN-----GVKRFFYASSACIYPEFKQ-----L---ETNVSLK 154 (370)
T ss_pred EEEEcccccCCccccccCchhhHHHHHHHHHHHHHHHHHh-----CCCEEEEeCchhhcCCccc-----c---CcCCCcC
Confidence 9999997542 133445678999999999999876 6789999999999974210 0 0123456
Q ss_pred CCCCCCCCCCcchhH-----HHHHhh--cCCCceEEEecCCceEecCC
Q 028258 159 EDSSRLPFPNFYYEL-----EDVSAS--YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 159 e~~~~~~~~~~~~~~-----e~~l~~--~~~~~~~~i~Rp~~i~G~~~ 199 (211)
|+.+....|...|.. |.++.. ...+++++++||+.+|||..
T Consensus 155 E~~~~p~~p~s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~ 202 (370)
T PLN02695 155 ESDAWPAEPQDAYGLEKLATEELCKHYTKDFGIECRIGRFHNIYGPFG 202 (370)
T ss_pred cccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEECCccCCCC
Confidence 654211233444443 333322 34689999999999999864
|
|
| >PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.9e-23 Score=166.11 Aligned_cols=160 Identities=20% Similarity=0.215 Sum_probs=127.2
Q ss_pred EEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCC--CCCceeEEEeeCCCHHHHHHHHHhcccccceEEee
Q 028258 12 ALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFP--TALVDRYITFDALDPTDTALKLSLISQEITNLFWV 89 (211)
Q Consensus 12 ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~--~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~~~ 89 (211)
|||||||||||++++++|+ ++|++|+.+.|+..+.... ..+++ ++.+|+.|.+.+.+.++... +|.|||+
T Consensus 1 IlI~GatG~iG~~l~~~l~-----~~g~~v~~~~~~~~~~~~~~~~~~~~-~~~~dl~~~~~~~~~~~~~~--~d~vi~~ 72 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLL-----KKGHEVIVLSRSSNSESFEEKKLNVE-FVIGDLTDKEQLEKLLEKAN--IDVVIHL 72 (236)
T ss_dssp EEEETTTSHHHHHHHHHHH-----HTTTEEEEEESCSTGGHHHHHHTTEE-EEESETTSHHHHHHHHHHHT--ESEEEEE
T ss_pred EEEEccCCHHHHHHHHHHH-----HcCCccccccccccccccccccceEE-EEEeeccccccccccccccC--ceEEEEe
Confidence 7999999999999999999 7999999999987753211 12788 99999999999999999874 8999999
Q ss_pred cccCCc-----hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCCCCC
Q 028258 90 PLQVQE-----SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRL 164 (211)
Q Consensus 90 a~~~~~-----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~~~~ 164 (211)
|+.... +....++.|+.++.++++++.+. ++++|+++||..+|+.+. ..+++|+++.
T Consensus 73 a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-----~~~~~i~~sS~~~y~~~~------------~~~~~e~~~~- 134 (236)
T PF01370_consen 73 AAFSSNPESFEDPEEIIEANVQGTRNLLEAAREA-----GVKRFIFLSSASVYGDPD------------GEPIDEDSPI- 134 (236)
T ss_dssp BSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHH-----TTSEEEEEEEGGGGTSSS------------SSSBETTSGC-
T ss_pred eccccccccccccccccccccccccccccccccc-----cccccccccccccccccc------------cccccccccc-
Confidence 987531 34567788999999999999987 568999999999997531 3567888875
Q ss_pred CCCCcchhHHH-----HHhh--cCCCceEEEecCCceEecC
Q 028258 165 PFPNFYYELED-----VSAS--YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 165 ~~~~~~~~~e~-----~l~~--~~~~~~~~i~Rp~~i~G~~ 198 (211)
.|...|...| ++.+ +..+++++++||+.+||+.
T Consensus 135 -~~~~~Y~~~K~~~e~~~~~~~~~~~~~~~~~R~~~vyG~~ 174 (236)
T PF01370_consen 135 -NPLSPYGASKRAAEELLRDYAKKYGLRVTILRPPNVYGPG 174 (236)
T ss_dssp -CHSSHHHHHHHHHHHHHHHHHHHHTSEEEEEEESEEESTT
T ss_pred -cccccccccccccccccccccccccccccccccccccccc
Confidence 3444454433 3333 2348999999999999998
|
The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B .... |
| >PLN02650 dihydroflavonol-4-reductase | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.8e-22 Score=170.37 Aligned_cols=169 Identities=13% Similarity=0.151 Sum_probs=120.4
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------C--CCCCceeEEEeeCCCHHHHHHHHH
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------F--PTALVDRYITFDALDPTDTALKLS 77 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~--~~~~~~~~i~~Dl~d~~~~~~~~~ 77 (211)
..+|+|||||||||||++++++|+ ++|++|++++|++.... . ....++ ++.+|++|++.+.+.++
T Consensus 3 ~~~k~iLVTGatGfIGs~l~~~L~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~v~~Dl~d~~~~~~~~~ 76 (351)
T PLN02650 3 SQKETVCVTGASGFIGSWLVMRLL-----ERGYTVRATVRDPANVKKVKHLLDLPGATTRLT-LWKADLAVEGSFDDAIR 76 (351)
T ss_pred CCCCEEEEeCCcHHHHHHHHHHHH-----HCCCEEEEEEcCcchhHHHHHHHhccCCCCceE-EEEecCCChhhHHHHHh
Confidence 456899999999999999999999 68999999998764321 0 013578 89999999998888887
Q ss_pred hcccccceEEeecccCCc---h-hHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCC
Q 028258 78 LISQEITNLFWVPLQVQE---S-EEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPY 153 (211)
Q Consensus 78 ~~~~~~~~v~~~a~~~~~---~-~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~ 153 (211)
+ +|+|||+|+.... + +...+++|+.++.++++++.+. ..+++|+++||..+|+....
T Consensus 77 ~----~d~ViH~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~----~~~~r~v~~SS~~~~~~~~~----------- 137 (351)
T PLN02650 77 G----CTGVFHVATPMDFESKDPENEVIKPTVNGMLSIMKACAKA----KTVRRIVFTSSAGTVNVEEH----------- 137 (351)
T ss_pred C----CCEEEEeCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhc----CCceEEEEecchhhcccCCC-----------
Confidence 5 6899999976431 2 2357799999999999999876 13689999999876653210
Q ss_pred CCC-CcCCCCC-------CCCCCcchhHHHH-----Hhh--cCCCceEEEecCCceEecCCC
Q 028258 154 EVP-FKEDSSR-------LPFPNFYYELEDV-----SAS--YSPAITYSVHRSSVIIGASPR 200 (211)
Q Consensus 154 ~~~-~~e~~~~-------~~~~~~~~~~e~~-----l~~--~~~~~~~~i~Rp~~i~G~~~~ 200 (211)
..+ ++|+... .+.+...|...|. +.. +..+++++++||+++|||...
T Consensus 138 ~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~~ 199 (351)
T PLN02650 138 QKPVYDEDCWSDLDFCRRKKMTGWMYFVSKTLAEKAAWKYAAENGLDFISIIPTLVVGPFIS 199 (351)
T ss_pred CCCccCcccCCchhhhhccccccchHHHHHHHHHHHHHHHHHHcCCeEEEECCCceECCCCC
Confidence 112 3443210 0112233443333 332 356999999999999999753
|
|
| >PLN02989 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.89 E-value=6.1e-22 Score=166.41 Aligned_cols=171 Identities=17% Similarity=0.162 Sum_probs=124.5
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------C--CCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------F--PTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~--~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
+|++|||||+||||++++++|+ ++|++|++++|++.... . ...+++ ++.+|++|++.+.+++++
T Consensus 5 ~k~vlVtG~~G~IG~~l~~~L~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~d~~~~~~~~~~- 77 (325)
T PLN02989 5 GKVVCVTGASGYIASWIVKLLL-----FRGYTINATVRDPKDRKKTDHLLALDGAKERLK-LFKADLLDEGSFELAIDG- 77 (325)
T ss_pred CCEEEEECCchHHHHHHHHHHH-----HCCCEEEEEEcCCcchhhHHHHHhccCCCCceE-EEeCCCCCchHHHHHHcC-
Confidence 5899999999999999999999 68999999888765321 0 114678 899999999988888875
Q ss_pred ccccceEEeecccCC-----chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCC
Q 028258 80 SQEITNLFWVPLQVQ-----ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYE 154 (211)
Q Consensus 80 ~~~~~~v~~~a~~~~-----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~ 154 (211)
+|+|||+|+... ..+...+++|+.++.++++++.+. . +.++|+++||...|+++.. ..+ ..
T Consensus 78 ---~d~vih~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~---~-~~~~iv~~SS~~~~~~~~~---~~~----~~ 143 (325)
T PLN02989 78 ---CETVFHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKV---S-SVKRVILTSSMAAVLAPET---KLG----PN 143 (325)
T ss_pred ---CCEEEEeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHc---C-CceEEEEecchhheecCCc---cCC----CC
Confidence 689999998632 234567799999999999999875 1 4678999999877764311 001 12
Q ss_pred CCCcCCCCCCCC----CCcchhH-----HHHHhh--cCCCceEEEecCCceEecCCC
Q 028258 155 VPFKEDSSRLPF----PNFYYEL-----EDVSAS--YSPAITYSVHRSSVIIGASPR 200 (211)
Q Consensus 155 ~~~~e~~~~~~~----~~~~~~~-----e~~l~~--~~~~~~~~i~Rp~~i~G~~~~ 200 (211)
.+++|+.+..+. +...|.. |.++.. +..+++++++||+.+|||+..
T Consensus 144 ~~~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~ 200 (325)
T PLN02989 144 DVVDETFFTNPSFAEERKQWYVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQ 200 (325)
T ss_pred CccCcCCCCchhHhcccccchHHHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCCCC
Confidence 456777664321 1233433 333333 346899999999999999753
|
|
| >PLN02986 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.89 E-value=1e-21 Score=164.86 Aligned_cols=168 Identities=15% Similarity=0.100 Sum_probs=121.4
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------C--CCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------F--PTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~--~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
+|+|||||||||||++++++|+ ++||+|+++.|+..... . ....++ ++.+|++|++.+.+++++
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~-----~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~- 77 (322)
T PLN02986 5 GKLVCVTGASGYIASWIVKLLL-----LRGYTVKATVRDLTDRKKTEHLLALDGAKERLK-LFKADLLEESSFEQAIEG- 77 (322)
T ss_pred CCEEEEECCCcHHHHHHHHHHH-----HCCCEEEEEECCCcchHHHHHHHhccCCCCceE-EEecCCCCcchHHHHHhC-
Confidence 5899999999999999999999 68999999998765311 0 124688 999999999998888875
Q ss_pred ccccceEEeecccCCc---hh-HHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeee--ecccCCccccCCCCCC
Q 028258 80 SQEITNLFWVPLQVQE---SE-EVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY--MGPIFDPSLAGQLMPY 153 (211)
Q Consensus 80 ~~~~~~v~~~a~~~~~---~~-~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y--~~~~~~~~~~g~~~~~ 153 (211)
+|+|||+|+.... ++ ...+++|+.++.++++++.+. .++++|+++||...| +.+.. . .
T Consensus 78 ---~d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~----~~v~rvV~~SS~~~~~~~~~~~-----~----~ 141 (322)
T PLN02986 78 ---CDAVFHTASPVFFTVKDPQTELIDPALKGTINVLNTCKET----PSVKRVILTSSTAAVLFRQPPI-----E----A 141 (322)
T ss_pred ---CCEEEEeCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhc----CCccEEEEecchhheecCCccC-----C----C
Confidence 6899999986422 22 345789999999999999874 257899999997654 22110 0 1
Q ss_pred CCCCcCCCCCCC----CCCcchhHHHHHhh-------cCCCceEEEecCCceEecCC
Q 028258 154 EVPFKEDSSRLP----FPNFYYELEDVSAS-------YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 154 ~~~~~e~~~~~~----~~~~~~~~e~~l~~-------~~~~~~~~i~Rp~~i~G~~~ 199 (211)
..+++|+.+..+ .+...|...|...+ +..+++++++||+.+|||..
T Consensus 142 ~~~~~E~~~~~p~~~~~~~~~Y~~sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~~ 198 (322)
T PLN02986 142 NDVVDETFFSDPSLCRETKNWYPLSKILAENAAWEFAKDNGIDMVVLNPGFICGPLL 198 (322)
T ss_pred CCCcCcccCCChHHhhccccchHHHHHHHHHHHHHHHHHhCCeEEEEcccceeCCCC
Confidence 234666654221 12333444333332 34689999999999999964
|
|
| >TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.89 E-value=7.1e-22 Score=167.80 Aligned_cols=166 Identities=20% Similarity=0.149 Sum_probs=123.7
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----C-CCCCceeEEEeeCCCHHHHHHHHHhcccc
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----F-PTALVDRYITFDALDPTDTALKLSLISQE 82 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----~-~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~ 82 (211)
+|+|||||||||||++++++|+ ++|++|++++|++.... . ....++ ++.+|++|.+++.+.++..+
T Consensus 4 ~k~ilItGatG~IG~~l~~~L~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~-- 75 (349)
T TIGR02622 4 GKKVLVTGHTGFKGSWLSLWLL-----ELGAEVYGYSLDPPTSPNLFELLNLAKKIE-DHFGDIRDAAKLRKAIAEFK-- 75 (349)
T ss_pred CCEEEEECCCChhHHHHHHHHH-----HCCCEEEEEeCCCccchhHHHHHhhcCCce-EEEccCCCHHHHHHHHhhcC--
Confidence 5789999999999999999999 68999999998765321 0 123577 88999999999999988764
Q ss_pred cceEEeecccCC-----chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCC
Q 028258 83 ITNLFWVPLQVQ-----ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPF 157 (211)
Q Consensus 83 ~~~v~~~a~~~~-----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~ 157 (211)
+|+|||+|+... .++...+++|+.++.++++++... + .+++|+++||+.+|+.+. ...++
T Consensus 76 ~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~---~-~~~~iv~~SS~~vyg~~~-----------~~~~~ 140 (349)
T TIGR02622 76 PEIVFHLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAI---G-SVKAVVNVTSDKCYRNDE-----------WVWGY 140 (349)
T ss_pred CCEEEECCcccccccchhCHHHHHHHhHHHHHHHHHHHHhc---C-CCCEEEEEechhhhCCCC-----------CCCCC
Confidence 799999998532 245567899999999999999765 2 367899999999997431 12356
Q ss_pred cCCCCCCCCCCcchh-----HHHHHhh--c-C------CCceEEEecCCceEecCC
Q 028258 158 KEDSSRLPFPNFYYE-----LEDVSAS--Y-S------PAITYSVHRSSVIIGASP 199 (211)
Q Consensus 158 ~e~~~~~~~~~~~~~-----~e~~l~~--~-~------~~~~~~i~Rp~~i~G~~~ 199 (211)
+|+.+.. |...|. .|.++.. . . ++++++++||+.+|||+.
T Consensus 141 ~e~~~~~--p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~ 194 (349)
T TIGR02622 141 RETDPLG--GHDPYSSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGD 194 (349)
T ss_pred ccCCCCC--CCCcchhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCc
Confidence 6666532 222233 3333332 1 1 389999999999999864
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose. |
| >COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.89 E-value=8.5e-22 Score=163.94 Aligned_cols=162 Identities=16% Similarity=0.123 Sum_probs=121.3
Q ss_pred EEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccceEEeecc
Q 028258 12 ALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITNLFWVPL 91 (211)
Q Consensus 12 ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~~~a~ 91 (211)
|||||||||||++|+++|+ ++||+|++++|...+.......++ ++.+|++|.+...+..+.. .|.|+|+++
T Consensus 3 ILVtG~tGfiG~~l~~~L~-----~~g~~V~~~~r~~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~~~---~d~vih~aa 73 (314)
T COG0451 3 ILVTGGAGFIGSHLVERLL-----AAGHDVRGLDRLRDGLDPLLSGVE-FVVLDLTDRDLVDELAKGV---PDAVIHLAA 73 (314)
T ss_pred EEEEcCcccHHHHHHHHHH-----hCCCeEEEEeCCCccccccccccc-eeeecccchHHHHHHHhcC---CCEEEEccc
Confidence 9999999999999999999 679999999997765432225678 9999999987666666653 188999998
Q ss_pred cCCch------hHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCC-CCCC
Q 028258 92 QVQES------EEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKED-SSRL 164 (211)
Q Consensus 92 ~~~~~------~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~-~~~~ 164 (211)
..... +.+.+++|+.++.++++++++. ++++|++.||..+|+.+ . ...+++|+ .+.
T Consensus 74 ~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~-----~~~~~v~~ss~~~~~~~-~----------~~~~~~E~~~~~- 136 (314)
T COG0451 74 QSSVPDSNASDPAEFLDVNVDGTLNLLEAARAA-----GVKRFVFASSVSVVYGD-P----------PPLPIDEDLGPP- 136 (314)
T ss_pred cCchhhhhhhCHHHHHHHHHHHHHHHHHHHHHc-----CCCeEEEeCCCceECCC-C----------CCCCcccccCCC-
Confidence 76531 2347899999999999999985 68899997777777643 1 12367777 342
Q ss_pred CCCCcchhH-----HHHHhh--cCCCceEEEecCCceEecCCC
Q 028258 165 PFPNFYYEL-----EDVSAS--YSPAITYSVHRSSVIIGASPR 200 (211)
Q Consensus 165 ~~~~~~~~~-----e~~l~~--~~~~~~~~i~Rp~~i~G~~~~ 200 (211)
.|...|.. |+++.+ ...+++++++||+.+||++..
T Consensus 137 -~p~~~Yg~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~ 178 (314)
T COG0451 137 -RPLNPYGVSKLAAEQLLRAYARLYGLPVVILRPFNVYGPGDK 178 (314)
T ss_pred -CCCCHHHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCC
Confidence 23324544 444433 235899999999999999874
|
|
| >PRK10217 dTDP-glucose 4,6-dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=8.1e-22 Score=167.53 Aligned_cols=170 Identities=12% Similarity=0.063 Sum_probs=121.2
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEE-EeCCCCCC--C-----CCCCCceeEEEeeCCCHHHHHHHHHhccc
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYG-AARRPPPG--W-----FPTALVDRYITFDALDPTDTALKLSLISQ 81 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~-~~R~~~~~--~-----~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~ 81 (211)
++|||||||||||++++++|+ ++|+++++ ++|..... . .....++ ++.+|++|.+.+.+.+++..
T Consensus 2 ~~vlVtGatGfIG~~l~~~L~-----~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~~~~~~~~~~- 74 (355)
T PRK10217 2 RKILITGGAGFIGSALVRYII-----NETSDAVVVVDKLTYAGNLMSLAPVAQSERFA-FEKVDICDRAELARVFTEHQ- 74 (355)
T ss_pred cEEEEEcCCcHHHHHHHHHHH-----HcCCCEEEEEecCccccchhhhhhcccCCceE-EEECCCcChHHHHHHHhhcC-
Confidence 679999999999999999999 68887554 44432211 0 0123577 88999999999999988753
Q ss_pred ccceEEeecccCCc-----hhHHHHhhcHHHHHHHHHHHHhcC----CCCCCceEEEEeecCeeeecccCCccccCCCCC
Q 028258 82 EITNLFWVPLQVQE-----SEEVNIFKNSTMLKNVLSVLVSSN----SGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMP 152 (211)
Q Consensus 82 ~~~~v~~~a~~~~~-----~~~~~~~~n~~~~~~l~~~~~~~~----~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~ 152 (211)
+|+|||+|+.... .+...+++|+.++.++++++.+.+ ....++++|+++||..+|+... +
T Consensus 75 -~D~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~------~---- 143 (355)
T PRK10217 75 -PDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLH------S---- 143 (355)
T ss_pred -CCEEEECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCC------C----
Confidence 7999999987432 345678999999999999997520 0012467899999999997421 1
Q ss_pred CCCCCcCCCCCCCCCCcchhH-----HHHHhh--cCCCceEEEecCCceEecCC
Q 028258 153 YEVPFKEDSSRLPFPNFYYEL-----EDVSAS--YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 153 ~~~~~~e~~~~~~~~~~~~~~-----e~~l~~--~~~~~~~~i~Rp~~i~G~~~ 199 (211)
...|++|+.+.. |...|.. |.++.. +..+++++++||+.+|||+.
T Consensus 144 ~~~~~~E~~~~~--p~s~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~ 195 (355)
T PRK10217 144 TDDFFTETTPYA--PSSPYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYH 195 (355)
T ss_pred CCCCcCCCCCCC--CCChhHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCC
Confidence 134677877642 3333443 333333 35789999999999999975
|
|
| >PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.7e-22 Score=181.17 Aligned_cols=164 Identities=15% Similarity=0.189 Sum_probs=121.1
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC--CCCCCCceeEEEeeCCCHHH-HHHHHHhcccccce
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG--WFPTALVDRYITFDALDPTD-TALKLSLISQEITN 85 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~--~~~~~~~~~~i~~Dl~d~~~-~~~~~~~~~~~~~~ 85 (211)
.++|||||||||||++|+++|++ +.||+|++++|.+... .....+++ ++.+|++|.+. +.+++++ +|+
T Consensus 315 ~~~VLVTGatGFIGs~Lv~~Ll~----~~g~~V~~l~r~~~~~~~~~~~~~~~-~~~gDl~d~~~~l~~~l~~----~D~ 385 (660)
T PRK08125 315 RTRVLILGVNGFIGNHLTERLLR----DDNYEVYGLDIGSDAISRFLGHPRFH-FVEGDISIHSEWIEYHIKK----CDV 385 (660)
T ss_pred CCEEEEECCCchHHHHHHHHHHh----CCCcEEEEEeCCchhhhhhcCCCceE-EEeccccCcHHHHHHHhcC----CCE
Confidence 46799999999999999999993 3479999999976532 11235788 99999998755 4556654 799
Q ss_pred EEeecccCCc-----hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCC
Q 028258 86 LFWVPLQVQE-----SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKED 160 (211)
Q Consensus 86 v~~~a~~~~~-----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~ 160 (211)
|||+|+.... ++...+++|+.++.++++++.+. + ++|+++||..+||.+. ..+++|+
T Consensus 386 ViHlAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~-----~-~~~V~~SS~~vyg~~~------------~~~~~E~ 447 (660)
T PRK08125 386 VLPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKY-----N-KRIIFPSTSEVYGMCT------------DKYFDED 447 (660)
T ss_pred EEECccccCchhhccCHHHHHHhhHHHHHHHHHHHHhc-----C-CeEEEEcchhhcCCCC------------CCCcCcc
Confidence 9999986442 34567789999999999999986 4 6899999999997421 2456776
Q ss_pred CCCC---C--CCCcchhHHHH-----Hhh--cCCCceEEEecCCceEecCC
Q 028258 161 SSRL---P--FPNFYYELEDV-----SAS--YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 161 ~~~~---~--~~~~~~~~e~~-----l~~--~~~~~~~~i~Rp~~i~G~~~ 199 (211)
++.. + .|...|...|. +.. +..+++++++||+++|||+.
T Consensus 448 ~~~~~~~p~~~p~s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~ 498 (660)
T PRK08125 448 TSNLIVGPINKQRWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRL 498 (660)
T ss_pred ccccccCCCCCCccchHHHHHHHHHHHHHHHHhcCCceEEEEEceeeCCCc
Confidence 6431 1 13334544443 333 34689999999999999975
|
|
| >TIGR01472 gmd GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.88 E-value=8.6e-22 Score=166.85 Aligned_cols=166 Identities=17% Similarity=0.111 Sum_probs=123.4
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC---CC----------CCCCceeEEEeeCCCHHHHHHHH
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG---WF----------PTALVDRYITFDALDPTDTALKL 76 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~---~~----------~~~~~~~~i~~Dl~d~~~~~~~~ 76 (211)
|+|||||||||||++|+++|+ +.|++|++++|++... .. ...+++ ++.+|++|.+.+.+++
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~l~~~~ 74 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLL-----EKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMK-LHYGDLTDSSNLRRII 74 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHH-----HCCCEEEEEecCCcccchhhhhhhhhcccccccccee-EEEeccCCHHHHHHHH
Confidence 589999999999999999999 6899999999976421 00 024588 9999999999999999
Q ss_pred HhcccccceEEeecccCCc-----hhHHHHhhcHHHHHHHHHHHHhcCCCCC-CceEEEEeecCeeeecccCCccccCCC
Q 028258 77 SLISQEITNLFWVPLQVQE-----SEEVNIFKNSTMLKNVLSVLVSSNSGRS-RLRHVALLTGTKHYMGPIFDPSLAGQL 150 (211)
Q Consensus 77 ~~~~~~~~~v~~~a~~~~~-----~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~~~~~s~~~~y~~~~~~~~~~g~~ 150 (211)
++.. +|.|||+|+.... .+....++|+.++.++++++.+. +. +.++|+++||..+||.+.
T Consensus 75 ~~~~--~d~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~---~~~~~~~~v~~SS~~vyg~~~--------- 140 (343)
T TIGR01472 75 DEIK--PTEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTL---GLIKSVKFYQASTSELYGKVQ--------- 140 (343)
T ss_pred HhCC--CCEEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHh---CCCcCeeEEEeccHHhhCCCC---------
Confidence 8764 7999999987432 23445678999999999999876 21 134889999999998531
Q ss_pred CCCCCCCcCCCCCCCCCCcchhHHH-----HHhh--cCCCceEEEecCCceEecCCC
Q 028258 151 MPYEVPFKEDSSRLPFPNFYYELED-----VSAS--YSPAITYSVHRSSVIIGASPR 200 (211)
Q Consensus 151 ~~~~~~~~e~~~~~~~~~~~~~~e~-----~l~~--~~~~~~~~i~Rp~~i~G~~~~ 200 (211)
..|.+|+.+.. |...|...| ++.. +..++++++.|+..+|||..+
T Consensus 141 ---~~~~~E~~~~~--p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~ 192 (343)
T TIGR01472 141 ---EIPQNETTPFY--PRSPYAAAKLYAHWITVNYREAYGLFAVNGILFNHESPRRG 192 (343)
T ss_pred ---CCCCCCCCCCC--CCChhHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCCCC
Confidence 23567777642 333444333 3322 345788999999999998753
|
Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116). |
| >PLN02662 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.88 E-value=8e-22 Score=165.23 Aligned_cols=168 Identities=15% Similarity=0.151 Sum_probs=121.2
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------C--CCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------F--PTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~--~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
.|+|||||||||||++|+++|+ ++|++|++++|+..... . ..++++ ++.+|++|++.+..++++
T Consensus 4 ~~~ilVtGatGfIG~~l~~~L~-----~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~- 76 (322)
T PLN02662 4 GKVVCVTGASGYIASWLVKLLL-----QRGYTVKATVRDPNDPKKTEHLLALDGAKERLH-LFKANLLEEGSFDSVVDG- 76 (322)
T ss_pred CCEEEEECChHHHHHHHHHHHH-----HCCCEEEEEEcCCCchhhHHHHHhccCCCCceE-EEeccccCcchHHHHHcC-
Confidence 4789999999999999999999 68999999998764311 0 124678 999999999988888875
Q ss_pred ccccceEEeecccCC---chhH-HHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe--eeecccCCccccCCCCCC
Q 028258 80 SQEITNLFWVPLQVQ---ESEE-VNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK--HYMGPIFDPSLAGQLMPY 153 (211)
Q Consensus 80 ~~~~~~v~~~a~~~~---~~~~-~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~--~y~~~~~~~~~~g~~~~~ 153 (211)
+|+|||+|+... .++. ..+++|+.++.++++++.+. .++++|+++||.. .|++... ..
T Consensus 77 ---~d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~----~~~~~~v~~SS~~~~~y~~~~~---------~~ 140 (322)
T PLN02662 77 ---CEGVFHTASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKV----PSVKRVVVTSSMAAVAYNGKPL---------TP 140 (322)
T ss_pred ---CCEEEEeCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhC----CCCCEEEEccCHHHhcCCCcCC---------CC
Confidence 689999998642 2333 57789999999999998764 2578999999865 3542110 01
Q ss_pred CCCCcCCCCCCCC----CCcchhHHHHHhh-------cCCCceEEEecCCceEecCC
Q 028258 154 EVPFKEDSSRLPF----PNFYYELEDVSAS-------YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 154 ~~~~~e~~~~~~~----~~~~~~~e~~l~~-------~~~~~~~~i~Rp~~i~G~~~ 199 (211)
..+++|+.+..+. ....|...|.+.+ +..+++++++||+.+|||..
T Consensus 141 ~~~~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~~ 197 (322)
T PLN02662 141 DVVVDETWFSDPAFCEESKLWYVLSKTLAEEAAWKFAKENGIDMVTINPAMVIGPLL 197 (322)
T ss_pred CCcCCcccCCChhHhhcccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCcccCCCC
Confidence 2356776653221 1123444343332 34689999999999999974
|
|
| >KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.88 E-value=9.5e-22 Score=160.66 Aligned_cols=166 Identities=17% Similarity=0.140 Sum_probs=132.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC----------CCCCCCceeEEEeeCCCHHHHHHHHH
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG----------WFPTALVDRYITFDALDPTDTALKLS 77 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~----------~~~~~~~~~~i~~Dl~d~~~~~~~~~ 77 (211)
+.++||||||.||||+|.+-+|+ ++||.|+++++-.... ......+. ++.+|+.|.+.+++.|+
T Consensus 1 ~~~~VLVtGgaGyiGsht~l~L~-----~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~-f~~~Dl~D~~~L~kvF~ 74 (343)
T KOG1371|consen 1 GGKHVLVTGGAGYIGSHTVLALL-----KRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVF-FVEGDLNDAEALEKLFS 74 (343)
T ss_pred CCcEEEEecCCcceehHHHHHHH-----hCCCcEEEEecccccchhHHHHHHHhcCCCCceE-EEEeccCCHHHHHHHHh
Confidence 35789999999999999999999 7999999998633221 11237889 99999999999999999
Q ss_pred hcccccceEEeecccCC-----chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCC
Q 028258 78 LISQEITNLFWVPLQVQ-----ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMP 152 (211)
Q Consensus 78 ~~~~~~~~v~~~a~~~~-----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~ 152 (211)
... +|+|+|+|+... .++..++..|+.++.++++.++++ +++.++++||+.+||.|.
T Consensus 75 ~~~--fd~V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~-----~~~~~V~sssatvYG~p~----------- 136 (343)
T KOG1371|consen 75 EVK--FDAVMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAH-----NVKALVFSSSATVYGLPT----------- 136 (343)
T ss_pred hcC--CceEEeehhhhccchhhhCchhheehhhhhHHHHHHHHHHc-----CCceEEEecceeeecCcc-----------
Confidence 886 899999998754 356678899999999999999998 589999999999999763
Q ss_pred CCCCCcCCCCCCCCCCcchh-----HHHHHhh--cCCCceEEEecCCceEecCC
Q 028258 153 YEVPFKEDSSRLPFPNFYYE-----LEDVSAS--YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 153 ~~~~~~e~~~~~~~~~~~~~-----~e~~l~~--~~~~~~~~i~Rp~~i~G~~~ 199 (211)
..|++|+.|.. .|...|. .|++..+ ...+|..+.+|-++.+|..+
T Consensus 137 -~ip~te~~~t~-~p~~pyg~tK~~iE~i~~d~~~~~~~~~~~LRyfn~~ga~p 188 (343)
T KOG1371|consen 137 -KVPITEEDPTD-QPTNPYGKTKKAIEEIIHDYNKAYGWKVTGLRYFNVIGAHP 188 (343)
T ss_pred -eeeccCcCCCC-CCCCcchhhhHHHHHHHHhhhccccceEEEEEeccccCccc
Confidence 57899998865 2433333 3444433 33459999999999999444
|
|
| >PLN02240 UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.3e-21 Score=163.45 Aligned_cols=166 Identities=16% Similarity=0.097 Sum_probs=124.3
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----------CCCCCceeEEEeeCCCHHHHHHH
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----------FPTALVDRYITFDALDPTDTALK 75 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----------~~~~~~~~~i~~Dl~d~~~~~~~ 75 (211)
+++++|||||||||||++|+++|+ ++|++|++++|...... ....+++ ++.+|++|++.+.++
T Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~-----~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~l~~~ 76 (352)
T PLN02240 3 LMGRTILVTGGAGYIGSHTVLQLL-----LAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLV-FHKVDLRDKEALEKV 76 (352)
T ss_pred CCCCEEEEECCCChHHHHHHHHHH-----HCCCEEEEEeCCCcchHHHHHHHHHhhcccCccce-EEecCcCCHHHHHHH
Confidence 345889999999999999999999 68999999987532110 0124678 999999999999888
Q ss_pred HHhcccccceEEeecccCC-----chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCC
Q 028258 76 LSLISQEITNLFWVPLQVQ-----ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQL 150 (211)
Q Consensus 76 ~~~~~~~~~~v~~~a~~~~-----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~ 150 (211)
++... +|+|||+|+... .++...+++|+.++.++++++.+. ++++|+++||+.+|+.+
T Consensus 77 ~~~~~--~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~~v~~Ss~~vyg~~---------- 139 (352)
T PLN02240 77 FASTR--FDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKH-----GCKKLVFSSSATVYGQP---------- 139 (352)
T ss_pred HHhCC--CCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEEccHHHhCCC----------
Confidence 87653 899999997632 244567899999999999999876 56889999998888642
Q ss_pred CCCCCCCcCCCCCCCCCCcchh-----HHHHHhh---cCCCceEEEecCCceEecCC
Q 028258 151 MPYEVPFKEDSSRLPFPNFYYE-----LEDVSAS---YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 151 ~~~~~~~~e~~~~~~~~~~~~~-----~e~~l~~---~~~~~~~~i~Rp~~i~G~~~ 199 (211)
...+++|+.+.. +...|. .|.++.. ...+++.+++|++.+||+.+
T Consensus 140 --~~~~~~E~~~~~--~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~R~~~v~G~~~ 192 (352)
T PLN02240 140 --EEVPCTEEFPLS--ATNPYGRTKLFIEEICRDIHASDPEWKIILLRYFNPVGAHP 192 (352)
T ss_pred --CCCCCCCCCCCC--CCCHHHHHHHHHHHHHHHHHHhcCCCCEEEEeecCcCCCCc
Confidence 134678887743 223343 3444433 23578999999999999753
|
|
| >COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.4e-21 Score=157.77 Aligned_cols=167 Identities=11% Similarity=0.032 Sum_probs=127.9
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC-------CCCCCCCceeEEEeeCCCHHHHHHHHHhcccc
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP-------GWFPTALVDRYITFDALDPTDTALKLSLISQE 82 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~-------~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~ 82 (211)
+++|||||.||||+++++.+++. ...++|+.++.-.-. .....+++. ++++|+.|.+.+.+.++..+
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~---~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~-fv~~DI~D~~~v~~~~~~~~-- 74 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNK---HPDDHVVNLDKLTYAGNLENLADVEDSPRYR-FVQGDICDRELVDRLFKEYQ-- 74 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhc---CCCceEEEEecccccCCHHHHHhhhcCCCce-EEeccccCHHHHHHHHHhcC--
Confidence 46899999999999999999852 233668888762111 112357899 99999999999999998765
Q ss_pred cceEEeecccCCc-----hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCC
Q 028258 83 ITNLFWVPLQVQE-----SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPF 157 (211)
Q Consensus 83 ~~~v~~~a~~~~~-----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~ 157 (211)
+|+|+|+|+.+.. ++....++|+.||.+|++++++. . ..-+|+++|+..|||.-.. ....+
T Consensus 75 ~D~VvhfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~---~-~~frf~HISTDEVYG~l~~----------~~~~F 140 (340)
T COG1088 75 PDAVVHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKY---W-GKFRFHHISTDEVYGDLGL----------DDDAF 140 (340)
T ss_pred CCeEEEechhccccccccChhhhhhcchHHHHHHHHHHHHh---c-ccceEEEeccccccccccC----------CCCCc
Confidence 8999999988653 57778899999999999999987 2 2247899999999985321 13358
Q ss_pred cCCCCCCCCCCcchhHHHHHhh-------cCCCceEEEecCCceEecC
Q 028258 158 KEDSSRLPFPNFYYELEDVSAS-------YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 158 ~e~~~~~~~~~~~~~~e~~l~~-------~~~~~~~~i~Rp~~i~G~~ 198 (211)
+|++|. .|++.|++.|+-.+ +..|++++|.|+++-|||-
T Consensus 141 tE~tp~--~PsSPYSASKAasD~lVray~~TYglp~~ItrcSNNYGPy 186 (340)
T COG1088 141 TETTPY--NPSSPYSASKAASDLLVRAYVRTYGLPATITRCSNNYGPY 186 (340)
T ss_pred ccCCCC--CCCCCcchhhhhHHHHHHHHHHHcCCceEEecCCCCcCCC
Confidence 899886 34555554444333 5689999999999999973
|
|
| >TIGR03466 HpnA hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.6e-21 Score=161.18 Aligned_cols=164 Identities=16% Similarity=0.102 Sum_probs=124.8
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-CCCCCceeEEEeeCCCHHHHHHHHHhcccccceEEee
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-FPTALVDRYITFDALDPTDTALKLSLISQEITNLFWV 89 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~~~ 89 (211)
++|||||+||||++++++|+ ++||+|++++|++.... ....+++ ++.+|++|.+++.+++++ +|+|||+
T Consensus 2 ~vlItG~~G~iG~~l~~~L~-----~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~D~~~~~~l~~~~~~----~d~vi~~ 71 (328)
T TIGR03466 2 KVLVTGATGFVGSAVVRLLL-----EQGEEVRVLVRPTSDRRNLEGLDVE-IVEGDLRDPASLRKAVAG----CRALFHV 71 (328)
T ss_pred eEEEECCccchhHHHHHHHH-----HCCCEEEEEEecCccccccccCCce-EEEeeCCCHHHHHHHHhC----CCEEEEe
Confidence 69999999999999999999 68999999999766432 1234788 999999999998888875 6889999
Q ss_pred cccCC---chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCCCCCCC
Q 028258 90 PLQVQ---ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPF 166 (211)
Q Consensus 90 a~~~~---~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~~~~~~ 166 (211)
++... .++...+++|+.++.++++++... ++++|+++||..+|+... ...+.+|+.+..+.
T Consensus 72 a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~~v~~SS~~~~~~~~-----------~~~~~~e~~~~~~~ 135 (328)
T TIGR03466 72 AADYRLWAPDPEEMYAANVEGTRNLLRAALEA-----GVERVVYTSSVATLGVRG-----------DGTPADETTPSSLD 135 (328)
T ss_pred ceecccCCCCHHHHHHHHHHHHHHHHHHHHHh-----CCCeEEEEechhhcCcCC-----------CCCCcCccCCCCcc
Confidence 87532 345677899999999999999876 578999999988887421 13466777664322
Q ss_pred C-CcchhH-----HHHHhh--cCCCceEEEecCCceEecCCC
Q 028258 167 P-NFYYEL-----EDVSAS--YSPAITYSVHRSSVIIGASPR 200 (211)
Q Consensus 167 ~-~~~~~~-----e~~l~~--~~~~~~~~i~Rp~~i~G~~~~ 200 (211)
. ...|.. |+++.+ ...+++++++||+.+||++..
T Consensus 136 ~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilR~~~~~G~~~~ 177 (328)
T TIGR03466 136 DMIGHYKRSKFLAEQAALEMAAEKGLPVVIVNPSTPIGPRDI 177 (328)
T ss_pred cccChHHHHHHHHHHHHHHHHHhcCCCEEEEeCCccCCCCCC
Confidence 1 233443 333333 235899999999999999754
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. |
| >PLN02896 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.9e-21 Score=163.49 Aligned_cols=170 Identities=15% Similarity=0.123 Sum_probs=119.1
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC------CCCCCceeEEEeeCCCHHHHHHHHHhcccc
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW------FPTALVDRYITFDALDPTDTALKLSLISQE 82 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~ 82 (211)
.++||||||+||||++++++|+ ++|++|++++|++.... ....+++ ++.+|++|.+.+.+++++
T Consensus 10 ~~~vLVtG~~GfIG~~l~~~L~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~---- 79 (353)
T PLN02896 10 TGTYCVTGATGYIGSWLVKLLL-----QRGYTVHATLRDPAKSLHLLSKWKEGDRLR-LFRADLQEEGSFDEAVKG---- 79 (353)
T ss_pred CCEEEEECCCcHHHHHHHHHHH-----HCCCEEEEEeCChHHHHHHHHhhccCCeEE-EEECCCCCHHHHHHHHcC----
Confidence 5689999999999999999999 68999999998754310 1124688 899999999988888764
Q ss_pred cceEEeecccCCc-------hhHHH-----HhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCC
Q 028258 83 ITNLFWVPLQVQE-------SEEVN-----IFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQL 150 (211)
Q Consensus 83 ~~~v~~~a~~~~~-------~~~~~-----~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~ 150 (211)
+|+|||+|+.... ++... ++.|+.++.++++++.+. .++++|+++||..+|+.... .+.
T Consensus 80 ~d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~----~~~~~~v~~SS~~vyg~~~~----~~~- 150 (353)
T PLN02896 80 CDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKS----KTVKRVVFTSSISTLTAKDS----NGR- 150 (353)
T ss_pred CCEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhc----CCccEEEEEechhhcccccc----CCC-
Confidence 7899999986431 22222 344568999999999875 24789999999999974211 010
Q ss_pred CCCCCCCcCCCCCC-------CCCCcchhHHHHHhh-------cCCCceEEEecCCceEecCC
Q 028258 151 MPYEVPFKEDSSRL-------PFPNFYYELEDVSAS-------YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 151 ~~~~~~~~e~~~~~-------~~~~~~~~~e~~l~~-------~~~~~~~~i~Rp~~i~G~~~ 199 (211)
...+++|+.+.. .++...|...|+..+ +..+++++++||+.+|||..
T Consensus 151 --~~~~~~E~~~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~ 211 (353)
T PLN02896 151 --WRAVVDETCQTPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFL 211 (353)
T ss_pred --CCCccCcccCCcHHHhhccCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCc
Confidence 113455652210 112333544443333 35689999999999999975
|
|
| >PLN02583 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.86 E-value=7.3e-21 Score=158.38 Aligned_cols=171 Identities=13% Similarity=0.110 Sum_probs=120.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC-------CC--CCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-------WF--PTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~-------~~--~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
.+|+|||||||||||++++++|+ ++||+|+++.|+.... .. ...+++ ++.+|++|.+.+.+++.+
T Consensus 5 ~~k~vlVTGatG~IG~~lv~~Ll-----~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~-~~~~Dl~d~~~~~~~l~~ 78 (297)
T PLN02583 5 SSKSVCVMDASGYVGFWLVKRLL-----SRGYTVHAAVQKNGETEIEKEIRGLSCEEERLK-VFDVDPLDYHSILDALKG 78 (297)
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-----hCCCEEEEEEcCchhhhHHHHHHhcccCCCceE-EEEecCCCHHHHHHHHcC
Confidence 35789999999999999999999 6999999999864321 01 124688 899999999999888876
Q ss_pred cccccceEEeecccCCc---hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeee-cccCCccccCCCCCCC
Q 028258 79 ISQEITNLFWVPLQVQE---SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYM-GPIFDPSLAGQLMPYE 154 (211)
Q Consensus 79 ~~~~~~~v~~~a~~~~~---~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~-~~~~~~~~~g~~~~~~ 154 (211)
++.|+|+++.... .+...+++|+.++.++++++.+. .++++|+++||...++ .+.. .+ ..
T Consensus 79 ----~d~v~~~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~----~~v~riV~~SS~~a~~~~~~~----~~----~~ 142 (297)
T PLN02583 79 ----CSGLFCCFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQT----DTIEKVVFTSSLTAVIWRDDN----IS----TQ 142 (297)
T ss_pred ----CCEEEEeCccCCcccccHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEecchHheeccccc----CC----CC
Confidence 5678887654322 24567899999999999999875 2468999999876543 1100 00 12
Q ss_pred CCCcCCCCCCCC----CCcchhHHHHHhh-------cCCCceEEEecCCceEecCCC
Q 028258 155 VPFKEDSSRLPF----PNFYYELEDVSAS-------YSPAITYSVHRSSVIIGASPR 200 (211)
Q Consensus 155 ~~~~e~~~~~~~----~~~~~~~e~~l~~-------~~~~~~~~i~Rp~~i~G~~~~ 200 (211)
.+++|+.+..+. +...|...|.+.+ +..+++++++||+.||||...
T Consensus 143 ~~~~E~~~~~~~~~~~~~~~Y~~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~~~ 199 (297)
T PLN02583 143 KDVDERSWSDQNFCRKFKLWHALAKTLSEKTAWALAMDRGVNMVSINAGLLMGPSLT 199 (297)
T ss_pred CCCCcccCCCHHHHhhcccHHHHHHHHHHHHHHHHHHHhCCcEEEEcCCcccCCCCC
Confidence 356776542110 1113444344333 246899999999999999763
|
|
| >PRK10675 UDP-galactose-4-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.6e-20 Score=158.48 Aligned_cols=163 Identities=13% Similarity=0.091 Sum_probs=121.4
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC--------CCCCCceeEEEeeCCCHHHHHHHHHhcccc
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW--------FPTALVDRYITFDALDPTDTALKLSLISQE 82 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~--------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~ 82 (211)
++||||||||||++|+++|+ ++|++|++++|...... ....+++ ++.+|++|++.+.++++...
T Consensus 2 ~vlVtGatG~iG~~l~~~L~-----~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~~~~~~~~~~-- 73 (338)
T PRK10675 2 RVLVTGGSGYIGSHTCVQLL-----QNGHDVVILDNLCNSKRSVLPVIERLGGKHPT-FVEGDIRNEALLTEILHDHA-- 73 (338)
T ss_pred eEEEECCCChHHHHHHHHHH-----HCCCeEEEEecCCCchHhHHHHHHHhcCCCce-EEEccCCCHHHHHHHHhcCC--
Confidence 59999999999999999999 68999999886533211 0123567 88999999999888887543
Q ss_pred cceEEeecccCCc-----hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCC
Q 028258 83 ITNLFWVPLQVQE-----SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPF 157 (211)
Q Consensus 83 ~~~v~~~a~~~~~-----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~ 157 (211)
+|+|||+|+.... .+.+.+++|+.++.+++++++.. ++++|+++||+.+|+.. ...++
T Consensus 74 ~d~vvh~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~~v~~Ss~~~yg~~------------~~~~~ 136 (338)
T PRK10675 74 IDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAA-----NVKNLIFSSSATVYGDQ------------PKIPY 136 (338)
T ss_pred CCEEEECCccccccchhhCHHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEeccHHhhCCC------------CCCcc
Confidence 8999999976431 33467789999999999999876 57889999998888742 13467
Q ss_pred cCCCCCCCCCCcchh-----HHHHHhh---cCCCceEEEecCCceEecCC
Q 028258 158 KEDSSRLPFPNFYYE-----LEDVSAS---YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 158 ~e~~~~~~~~~~~~~-----~e~~l~~---~~~~~~~~i~Rp~~i~G~~~ 199 (211)
+|+++.. .|...|. .|.++.. ...+++++++|++.+||+.+
T Consensus 137 ~E~~~~~-~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~ilR~~~v~g~~~ 185 (338)
T PRK10675 137 VESFPTG-TPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHP 185 (338)
T ss_pred ccccCCC-CCCChhHHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecCCCc
Confidence 7877641 2333343 3444443 13579999999999999864
|
|
| >KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.2e-20 Score=158.70 Aligned_cols=171 Identities=15% Similarity=0.081 Sum_probs=125.6
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC-CCC------CCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP-GWF------PTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~-~~~------~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
+.+.+++||||+||+|+||+++|++. ....+|++++..+.. .+. ....++ ++.+|+.|...+..++.+
T Consensus 2 ~~~~~vlVtGG~GflG~hlv~~L~~~---~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~-~~~~D~~~~~~i~~a~~~- 76 (361)
T KOG1430|consen 2 EKKLSVLVTGGSGFLGQHLVQALLEN---ELKLEIRVVDKTPTQSNLPAELTGFRSGRVT-VILGDLLDANSISNAFQG- 76 (361)
T ss_pred CcCCEEEEECCccHHHHHHHHHHHhc---ccccEEEEeccCccccccchhhhcccCCcee-EEecchhhhhhhhhhccC-
Confidence 44678999999999999999999941 224889999998763 221 146788 999999999888888876
Q ss_pred ccccceEEeecccCCc-----hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCC
Q 028258 80 SQEITNLFWVPLQVQE-----SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYE 154 (211)
Q Consensus 80 ~~~~~~v~~~a~~~~~-----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~ 154 (211)
+ .|+|||+...+ +.+..+++|+.||.+++++|.+. ++++++++||..+..+.. +.
T Consensus 77 ---~-~Vvh~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~-----~v~~lIYtSs~~Vvf~g~-----------~~ 136 (361)
T KOG1430|consen 77 ---A-VVVHCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKEL-----GVKRLIYTSSAYVVFGGE-----------PI 136 (361)
T ss_pred ---c-eEEEeccccCccccccchhhheeecchhHHHHHHHHHHh-----CCCEEEEecCceEEeCCe-----------ec
Confidence 4 67788776443 35667899999999999999998 789999999988875321 11
Q ss_pred CCCcCCCCCCCCCCcchh-----HHHHHhhc--CCCceEEEecCCceEecCCCCC
Q 028258 155 VPFKEDSSRLPFPNFYYE-----LEDVSASY--SPAITYSVHRSSVIIGASPRSL 202 (211)
Q Consensus 155 ~~~~e~~~~~~~~~~~~~-----~e~~l~~~--~~~~~~~i~Rp~~i~G~~~~~~ 202 (211)
.-.+|+.|.......+|. .|+++.++ ..++..+.+||..||||++...
T Consensus 137 ~n~~E~~p~p~~~~d~Y~~sKa~aE~~Vl~an~~~~l~T~aLR~~~IYGpgd~~~ 191 (361)
T KOG1430|consen 137 INGDESLPYPLKHIDPYGESKALAEKLVLEANGSDDLYTCALRPPGIYGPGDKRL 191 (361)
T ss_pred ccCCCCCCCccccccccchHHHHHHHHHHHhcCCCCeeEEEEccccccCCCCccc
Confidence 224555553211112333 45555542 3569999999999999998654
|
|
| >PLN02653 GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.2e-20 Score=158.01 Aligned_cols=169 Identities=17% Similarity=0.069 Sum_probs=123.3
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC-----C-C------CCCCceeEEEeeCCCHHHHHHHH
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-----W-F------PTALVDRYITFDALDPTDTALKL 76 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~-----~-~------~~~~~~~~i~~Dl~d~~~~~~~~ 76 (211)
+|+|||||||||||++|+++|+ ++|++|++++|++... . . ....++ ++.+|++|.+.+.+++
T Consensus 6 ~~~vlVTGatGfiG~~l~~~L~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~~~~~~ 79 (340)
T PLN02653 6 RKVALITGITGQDGSYLTEFLL-----SKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMK-LHYGDLSDASSLRRWL 79 (340)
T ss_pred CCEEEEECCCCccHHHHHHHHH-----HCCCEEEEEecccccccccchhhhccccccccCceE-EEEecCCCHHHHHHHH
Confidence 5789999999999999999999 6899999999865321 0 0 023578 9999999999999998
Q ss_pred HhcccccceEEeecccCCc-----hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCC
Q 028258 77 SLISQEITNLFWVPLQVQE-----SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLM 151 (211)
Q Consensus 77 ~~~~~~~~~v~~~a~~~~~-----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~ 151 (211)
+... +|+|||+|+.... ++...+++|+.++.++++++.........+.+|+++||+.+||..
T Consensus 80 ~~~~--~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~----------- 146 (340)
T PLN02653 80 DDIK--PDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGST----------- 146 (340)
T ss_pred HHcC--CCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCC-----------
Confidence 8764 7999999987432 344566889999999999998761000112488999998999742
Q ss_pred CCCCCCcCCCCCCCCCCcchhH-----HHHHhh--cCCCceEEEecCCceEecCCC
Q 028258 152 PYEVPFKEDSSRLPFPNFYYEL-----EDVSAS--YSPAITYSVHRSSVIIGASPR 200 (211)
Q Consensus 152 ~~~~~~~e~~~~~~~~~~~~~~-----e~~l~~--~~~~~~~~i~Rp~~i~G~~~~ 200 (211)
..|++|+.+.. |...|.. |.++.. ...++.++..|+..+|||+.+
T Consensus 147 --~~~~~E~~~~~--p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~ 198 (340)
T PLN02653 147 --PPPQSETTPFH--PRSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRG 198 (340)
T ss_pred --CCCCCCCCCCC--CCChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCC
Confidence 12667777643 3333443 333332 346788899999999998653
|
|
| >PLN02686 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.1e-20 Score=161.69 Aligned_cols=174 Identities=11% Similarity=0.086 Sum_probs=120.0
Q ss_pred ccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC----C--------CCCCceeEEEeeCCCHHH
Q 028258 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW----F--------PTALVDRYITFDALDPTD 71 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~----~--------~~~~~~~~i~~Dl~d~~~ 71 (211)
+..+++|+||||||+||||++++++|+ ++||+|+++.|+..... . ...+++ ++.+|++|.+.
T Consensus 48 ~~~~~~k~VLVTGatGfIG~~lv~~L~-----~~G~~V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~-~v~~Dl~d~~~ 121 (367)
T PLN02686 48 GADAEARLVCVTGGVSFLGLAIVDRLL-----RHGYSVRIAVDTQEDKEKLREMEMFGEMGRSNDGIW-TVMANLTEPES 121 (367)
T ss_pred ccCCCCCEEEEECCchHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHhhhccccccCCceE-EEEcCCCCHHH
Confidence 334557899999999999999999999 68999998888643210 0 013578 89999999999
Q ss_pred HHHHHHhcccccceEEeecccCCc-----hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC--eeeecccCCc
Q 028258 72 TALKLSLISQEITNLFWVPLQVQE-----SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT--KHYMGPIFDP 144 (211)
Q Consensus 72 ~~~~~~~~~~~~~~v~~~a~~~~~-----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~--~~y~~~~~~~ 144 (211)
+.+++++ ++.|||+++.... .+....++|+.++.++++++.+. .++++|+++||. .+|+....
T Consensus 122 l~~~i~~----~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~----~~v~r~V~~SS~~~~vyg~~~~-- 191 (367)
T PLN02686 122 LHEAFDG----CAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRT----ESVRKCVFTSSLLACVWRQNYP-- 191 (367)
T ss_pred HHHHHHh----ccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhc----CCccEEEEeccHHHhcccccCC--
Confidence 9888886 5788899876422 12345678999999999999874 258899999985 46753110
Q ss_pred cccCCCCCCCCCCcCCCCCC----CCCCcchhH-----HHHHhh--cCCCceEEEecCCceEecCC
Q 028258 145 SLAGQLMPYEVPFKEDSSRL----PFPNFYYEL-----EDVSAS--YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 145 ~~~g~~~~~~~~~~e~~~~~----~~~~~~~~~-----e~~l~~--~~~~~~~~i~Rp~~i~G~~~ 199 (211)
.. ...+++|+.+.. ..|...|.. |+++.. +..+++++++||+.+|||+.
T Consensus 192 ---~~---~~~~i~E~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~~ 251 (367)
T PLN02686 192 ---HD---LPPVIDEESWSDESFCRDNKLWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPGF 251 (367)
T ss_pred ---CC---CCcccCCCCCCChhhcccccchHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCCC
Confidence 00 001244443211 123333443 444333 34689999999999999975
|
|
| >TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.5e-20 Score=155.05 Aligned_cols=147 Identities=17% Similarity=0.179 Sum_probs=114.3
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccceEEeec
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITNLFWVP 90 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~~~a 90 (211)
+|||||||||||++++++|+ ++||+|++++|+ .+|+.|++.+.+++++.+ +|+|||++
T Consensus 1 kilv~G~tG~iG~~l~~~l~-----~~g~~v~~~~r~---------------~~d~~~~~~~~~~~~~~~--~d~vi~~a 58 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLS-----PEGRVVVALTSS---------------QLDLTDPEALERLLRAIR--PDAVVNTA 58 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHH-----hcCCEEEEeCCc---------------ccCCCCHHHHHHHHHhCC--CCEEEECC
Confidence 48999999999999999999 689999999874 368889999999998865 79999999
Q ss_pred ccCCc-----hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCCCCCC
Q 028258 91 LQVQE-----SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLP 165 (211)
Q Consensus 91 ~~~~~-----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~~~~~ 165 (211)
+.... .+...+++|+.++.++++++.+. +. +|+++||..+|+.. ...|++|+++.
T Consensus 59 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~-~~v~~Ss~~vy~~~------------~~~~~~E~~~~-- 118 (287)
T TIGR01214 59 AYTDVDGAESDPEKAFAVNALAPQNLARAAARH-----GA-RLVHISTDYVFDGE------------GKRPYREDDAT-- 118 (287)
T ss_pred ccccccccccCHHHHHHHHHHHHHHHHHHHHHc-----CC-eEEEEeeeeeecCC------------CCCCCCCCCCC--
Confidence 86432 34456789999999999999876 33 78999999999642 13567787764
Q ss_pred CCCcchhHHHHHhh---cCCCceEEEecCCceEecCC
Q 028258 166 FPNFYYELEDVSAS---YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 166 ~~~~~~~~e~~l~~---~~~~~~~~i~Rp~~i~G~~~ 199 (211)
.|...|...|...+ +..+++++++||+.+||+..
T Consensus 119 ~~~~~Y~~~K~~~E~~~~~~~~~~~ilR~~~v~G~~~ 155 (287)
T TIGR01214 119 NPLNVYGQSKLAGEQAIRAAGPNALIVRTSWLYGGGG 155 (287)
T ss_pred CCcchhhHHHHHHHHHHHHhCCCeEEEEeeecccCCC
Confidence 23344544444333 23478999999999999975
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc. |
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.3e-20 Score=172.58 Aligned_cols=171 Identities=15% Similarity=0.042 Sum_probs=121.6
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC--C----C-CCCCCceeEEEeeCCCHHHHHHHHHhccc
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP--G----W-FPTALVDRYITFDALDPTDTALKLSLISQ 81 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~--~----~-~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~ 81 (211)
.|+|||||||||||++|+++|++. ..+++|++++|.... . . ...++++ ++.+|++|.+.+...+...+
T Consensus 6 ~~~VLVTGatGfIG~~lv~~Ll~~---g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~-~~~~Dl~d~~~~~~~~~~~~- 80 (668)
T PLN02260 6 PKNILITGAAGFIASHVANRLIRN---YPDYKIVVLDKLDYCSNLKNLNPSKSSPNFK-FVKGDIASADLVNYLLITEG- 80 (668)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHh---CCCCEEEEEeCCCccchhhhhhhcccCCCeE-EEECCCCChHHHHHHHhhcC-
Confidence 578999999999999999999930 127899999885311 0 0 1235788 99999999988776664433
Q ss_pred ccceEEeecccCCc-----hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCC
Q 028258 82 EITNLFWVPLQVQE-----SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVP 156 (211)
Q Consensus 82 ~~~~v~~~a~~~~~-----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~ 156 (211)
+|+|||+|+.... ++.+.+++|+.++.+++++++.. + .+++|+++||..+|+.+.. . ...+
T Consensus 81 -~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~---~-~vkr~I~~SS~~vyg~~~~-----~----~~~~ 146 (668)
T PLN02260 81 -IDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVT---G-QIRRFIHVSTDEVYGETDE-----D----ADVG 146 (668)
T ss_pred -CCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhc---C-CCcEEEEEcchHHhCCCcc-----c----cccC
Confidence 8999999987542 23456789999999999999886 2 4789999999999985321 0 0112
Q ss_pred CcCCCCCCCCCCcch----hHHHHHhh--cCCCceEEEecCCceEecCC
Q 028258 157 FKEDSSRLPFPNFYY----ELEDVSAS--YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 157 ~~e~~~~~~~~~~~~----~~e~~l~~--~~~~~~~~i~Rp~~i~G~~~ 199 (211)
.+|+.+.. +.+.|. ..|.++.. +..+++++++||+.|||+..
T Consensus 147 ~~E~~~~~-p~~~Y~~sK~~aE~~v~~~~~~~~l~~vilR~~~VyGp~~ 194 (668)
T PLN02260 147 NHEASQLL-PTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQ 194 (668)
T ss_pred ccccCCCC-CCCCcHHHHHHHHHHHHHHHHHcCCCEEEECcccccCcCC
Confidence 34555432 223332 23444443 34689999999999999975
|
|
| >PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=8e-21 Score=158.48 Aligned_cols=158 Identities=15% Similarity=0.144 Sum_probs=107.4
Q ss_pred EEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhc------ccccce
Q 028258 12 ALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLI------SQEITN 85 (211)
Q Consensus 12 ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~------~~~~~~ 85 (211)
|||||||||||++|+++|+ +.|++++++.|+..... .... +..+|+.|..+....++.+ .. +|+
T Consensus 2 ilVtGa~GfiG~~l~~~L~-----~~g~~~v~~~~~~~~~~---~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~~~-~d~ 71 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALN-----DKGITDILVVDNLKDGT---KFVN-LVDLDIADYMDKEDFLAQIMAGDDFGD-IEA 71 (308)
T ss_pred EEEecCCcHHHHHHHHHHH-----hCCCceEEEecCCCcch---HHHh-hhhhhhhhhhhHHHHHHHHhcccccCC-ccE
Confidence 8999999999999999999 68998777766543210 1123 4456776654333322221 12 899
Q ss_pred EEeecccCCc---hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCCC
Q 028258 86 LFWVPLQVQE---SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSS 162 (211)
Q Consensus 86 v~~~a~~~~~---~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~~ 162 (211)
|||+|+.... +....++.|+.++.++++++++. ++ +|+++||+.+|+.+. ..+.+|+.+
T Consensus 72 Vih~A~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~-----~~-~~i~~SS~~vyg~~~------------~~~~~E~~~ 133 (308)
T PRK11150 72 IFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLER-----EI-PFLYASSAATYGGRT------------DDFIEEREY 133 (308)
T ss_pred EEECceecCCcCCChHHHHHHHHHHHHHHHHHHHHc-----CC-cEEEEcchHHhCcCC------------CCCCccCCC
Confidence 9999975332 33456789999999999999886 45 589999999997531 224566655
Q ss_pred CCCCCCcchhH-----HHHHhh--cCCCceEEEecCCceEecCC
Q 028258 163 RLPFPNFYYEL-----EDVSAS--YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 163 ~~~~~~~~~~~-----e~~l~~--~~~~~~~~i~Rp~~i~G~~~ 199 (211)
. .|...|.. |+++.. ...+++++++||+.+||++.
T Consensus 134 ~--~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyG~~~ 175 (308)
T PRK11150 134 E--KPLNVYGYSKFLFDEYVRQILPEANSQICGFRYFNVYGPRE 175 (308)
T ss_pred C--CCCCHHHHHHHHHHHHHHHHHHHcCCCEEEEeeeeecCCCC
Confidence 3 23233433 433333 34689999999999999975
|
|
| >PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase | Back alignment and domain information |
|---|
Probab=99.85 E-value=6.7e-21 Score=158.35 Aligned_cols=149 Identities=14% Similarity=0.139 Sum_probs=111.7
Q ss_pred EEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccceEEeeccc
Q 028258 13 LIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITNLFWVPLQ 92 (211)
Q Consensus 13 lVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~~~a~~ 92 (211)
||||||||||++|++.|+ +.|++|+++.+ ...+|++|.+++.+.++..+ +|+|||||+.
T Consensus 1 lItGa~GfiG~~l~~~L~-----~~g~~v~~~~~--------------~~~~Dl~~~~~l~~~~~~~~--~d~Vih~A~~ 59 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLE-----ALGFTNLVLRT--------------HKELDLTRQADVEAFFAKEK--PTYVILAAAK 59 (306)
T ss_pred CcccCCCcccHHHHHHHH-----hCCCcEEEeec--------------cccCCCCCHHHHHHHHhccC--CCEEEEeeee
Confidence 699999999999999999 68888776542 22589999999999888764 7999999976
Q ss_pred CC------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCCCCC--
Q 028258 93 VQ------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRL-- 164 (211)
Q Consensus 93 ~~------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~~~~-- 164 (211)
.. ..+.+.++.|+.++.++++++.+. ++++|++.||+.+|+.. ...|++|+++..
T Consensus 60 ~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-----~~~~~i~~SS~~vyg~~------------~~~~~~E~~~~~~~ 122 (306)
T PLN02725 60 VGGIHANMTYPADFIRENLQIQTNVIDAAYRH-----GVKKLLFLGSSCIYPKF------------APQPIPETALLTGP 122 (306)
T ss_pred ecccchhhhCcHHHHHHHhHHHHHHHHHHHHc-----CCCeEEEeCceeecCCC------------CCCCCCHHHhccCC
Confidence 32 234567889999999999999987 57899999999999742 135677776321
Q ss_pred CCC-CcchhH-----HHHHhh--cCCCceEEEecCCceEecCC
Q 028258 165 PFP-NFYYEL-----EDVSAS--YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 165 ~~~-~~~~~~-----e~~l~~--~~~~~~~~i~Rp~~i~G~~~ 199 (211)
..| +..|.. |+++.. ...+++++++||+.+||++.
T Consensus 123 ~~p~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~R~~~vyG~~~ 165 (306)
T PLN02725 123 PEPTNEWYAIAKIAGIKMCQAYRIQYGWDAISGMPTNLYGPHD 165 (306)
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHHhCCCEEEEEecceeCCCC
Confidence 112 332433 333322 34689999999999999974
|
|
| >CHL00194 ycf39 Ycf39; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=6e-21 Score=160.20 Aligned_cols=148 Identities=11% Similarity=0.065 Sum_probs=111.6
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-CCCCCceeEEEeeCCCHHHHHHHHHhcccccceEEee
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-FPTALVDRYITFDALDPTDTALKLSLISQEITNLFWV 89 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~~~ 89 (211)
+|||||||||||++++++|+ ++||+|++++|++.+.. ....+++ ++.+|++|++++.+++++ +|+|||+
T Consensus 2 kIlVtGatG~iG~~lv~~Ll-----~~g~~V~~l~R~~~~~~~l~~~~v~-~v~~Dl~d~~~l~~al~g----~d~Vi~~ 71 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQAL-----DEGYQVRCLVRNLRKASFLKEWGAE-LVYGDLSLPETLPPSFKG----VTAIIDA 71 (317)
T ss_pred EEEEECCCcHHHHHHHHHHH-----HCCCeEEEEEcChHHhhhHhhcCCE-EEECCCCCHHHHHHHHCC----CCEEEEC
Confidence 69999999999999999999 68999999999865321 1235789 999999999999999886 6889998
Q ss_pred cccCCchhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCCCCCCCCCc
Q 028258 90 PLQVQESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNF 169 (211)
Q Consensus 90 a~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~~~~~~~~~ 169 (211)
++....++...+++|+.++.+++++++++ ++++|+++|+...+. ++ .. +....
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~l~~aa~~~-----gvkr~I~~Ss~~~~~--------~~-----------~~---~~~~~ 124 (317)
T CHL00194 72 STSRPSDLYNAKQIDWDGKLALIEAAKAA-----KIKRFIFFSILNAEQ--------YP-----------YI---PLMKL 124 (317)
T ss_pred CCCCCCCccchhhhhHHHHHHHHHHHHHc-----CCCEEEEeccccccc--------cC-----------CC---hHHHH
Confidence 76543344556788999999999999987 688999988732210 00 00 11122
Q ss_pred chhHHHHHhhcCCCceEEEecCCceEec
Q 028258 170 YYELEDVSASYSPAITYSVHRSSVIIGA 197 (211)
Q Consensus 170 ~~~~e~~l~~~~~~~~~~i~Rp~~i~G~ 197 (211)
+...|+++. ..+++|+++||+.+|+.
T Consensus 125 K~~~e~~l~--~~~l~~tilRp~~~~~~ 150 (317)
T CHL00194 125 KSDIEQKLK--KSGIPYTIFRLAGFFQG 150 (317)
T ss_pred HHHHHHHHH--HcCCCeEEEeecHHhhh
Confidence 334555554 47899999999988864
|
|
| >PLN02166 dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.6e-20 Score=163.92 Aligned_cols=156 Identities=17% Similarity=0.178 Sum_probs=113.0
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC------CCCCCceeEEEeeCCCHHHHHHHHHhcccc
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW------FPTALVDRYITFDALDPTDTALKLSLISQE 82 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~ 82 (211)
.++|||||||||||++|+++|+ +.|++|++++|...... ...+.++ ++..|+.+.. +.+
T Consensus 120 ~mkILVTGatGFIGs~Lv~~Ll-----~~G~~V~~ldr~~~~~~~~~~~~~~~~~~~-~~~~Di~~~~-----~~~---- 184 (436)
T PLN02166 120 RLRIVVTGGAGFVGSHLVDKLI-----GRGDEVIVIDNFFTGRKENLVHLFGNPRFE-LIRHDVVEPI-----LLE---- 184 (436)
T ss_pred CCEEEEECCccHHHHHHHHHHH-----HCCCEEEEEeCCCCccHhHhhhhccCCceE-EEECcccccc-----ccC----
Confidence 4679999999999999999999 68999999998532110 1124678 8889987652 222
Q ss_pred cceEEeecccCC-----chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCC
Q 028258 83 ITNLFWVPLQVQ-----ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPF 157 (211)
Q Consensus 83 ~~~v~~~a~~~~-----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~ 157 (211)
+|+|||+|+... .++.+.+++|+.++.+++++|++. +. +|+++||..+|+.+. ..|.
T Consensus 185 ~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~-----g~-r~V~~SS~~VYg~~~------------~~p~ 246 (436)
T PLN02166 185 VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRV-----GA-RFLLTSTSEVYGDPL------------EHPQ 246 (436)
T ss_pred CCEEEECceeccchhhccCHHHHHHHHHHHHHHHHHHHHHh-----CC-EEEEECcHHHhCCCC------------CCCC
Confidence 799999998643 245567889999999999999986 33 789999999998532 2345
Q ss_pred cCCC-----CCCCCCCcchhH-----HHHHhh--cCCCceEEEecCCceEecCC
Q 028258 158 KEDS-----SRLPFPNFYYEL-----EDVSAS--YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 158 ~e~~-----~~~~~~~~~~~~-----e~~l~~--~~~~~~~~i~Rp~~i~G~~~ 199 (211)
+|+. |. .|...|.. |+++.+ +..+++++++||+++||++.
T Consensus 247 ~E~~~~~~~p~--~p~s~Yg~SK~~aE~~~~~y~~~~~l~~~ilR~~~vYGp~~ 298 (436)
T PLN02166 247 KETYWGNVNPI--GERSCYDEGKRTAETLAMDYHRGAGVEVRIARIFNTYGPRM 298 (436)
T ss_pred CccccccCCCC--CCCCchHHHHHHHHHHHHHHHHHhCCCeEEEEEccccCCCC
Confidence 5553 22 22333443 444433 34689999999999999974
|
|
| >PLN02206 UDP-glucuronate decarboxylase | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.8e-20 Score=161.73 Aligned_cols=158 Identities=15% Similarity=0.130 Sum_probs=113.0
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC------CCCCCCceeEEEeeCCCHHHHHHHHHhcccc
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG------WFPTALVDRYITFDALDPTDTALKLSLISQE 82 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~------~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~ 82 (211)
.++|||||||||||++|+++|+ ++|++|++++|..... .....+++ ++.+|+.++. +.+
T Consensus 119 ~~kILVTGatGfIGs~Lv~~Ll-----~~G~~V~~ld~~~~~~~~~~~~~~~~~~~~-~i~~D~~~~~-----l~~---- 183 (442)
T PLN02206 119 GLRVVVTGGAGFVGSHLVDRLM-----ARGDSVIVVDNFFTGRKENVMHHFSNPNFE-LIRHDVVEPI-----LLE---- 183 (442)
T ss_pred CCEEEEECcccHHHHHHHHHHH-----HCcCEEEEEeCCCccchhhhhhhccCCceE-EEECCccChh-----hcC----
Confidence 4689999999999999999999 6899999998753211 11235678 8899997753 222
Q ss_pred cceEEeecccCC-----chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCC
Q 028258 83 ITNLFWVPLQVQ-----ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPF 157 (211)
Q Consensus 83 ~~~v~~~a~~~~-----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~ 157 (211)
+|+|||+|+... .++.+.+++|+.++.+++++|++. ++ +|+++||+.+|+.+. ..|.
T Consensus 184 ~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~-----g~-r~V~~SS~~VYg~~~------------~~p~ 245 (442)
T PLN02206 184 VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRV-----GA-RFLLTSTSEVYGDPL------------QHPQ 245 (442)
T ss_pred CCEEEEeeeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHh-----CC-EEEEECChHHhCCCC------------CCCC
Confidence 799999998643 245567889999999999999886 34 789999999997532 2344
Q ss_pred cCCCCC--C-CCCCcchhH-----HHHHhh--cCCCceEEEecCCceEecCC
Q 028258 158 KEDSSR--L-PFPNFYYEL-----EDVSAS--YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 158 ~e~~~~--~-~~~~~~~~~-----e~~l~~--~~~~~~~~i~Rp~~i~G~~~ 199 (211)
+|+... . ..+...|.. |+.+.. +..+++++++||+.+||++.
T Consensus 246 ~E~~~~~~~P~~~~s~Y~~SK~~aE~~~~~y~~~~g~~~~ilR~~~vyGp~~ 297 (442)
T PLN02206 246 VETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGANVEVRIARIFNTYGPRM 297 (442)
T ss_pred CccccccCCCCCccchHHHHHHHHHHHHHHHHHHhCCCeEEEEeccccCCCC
Confidence 554311 0 112333433 444333 34689999999999999973
|
|
| >TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.84 E-value=1e-19 Score=151.51 Aligned_cols=164 Identities=11% Similarity=0.018 Sum_probs=118.5
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCC--cEEEEEeCCCC--C-C--C--CCCCCceeEEEeeCCCHHHHHHHHHhccc
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSP--WKVYGAARRPP--P-G--W--FPTALVDRYITFDALDPTDTALKLSLISQ 81 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g--~~V~~~~R~~~--~-~--~--~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~ 81 (211)
+||||||||+||++++++|+ +.| ++|++++|... . . . ...++++ ++.+|++|++++.+++++..
T Consensus 1 ~ilItGatG~iG~~l~~~l~-----~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~- 73 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYIL-----NEHPDAEVIVLDKLTYAGNLENLADLEDNPRYR-FVKGDIGDRELVSRLFTEHQ- 73 (317)
T ss_pred CEEEEcCCchHHHHHHHHHH-----HhCCCCEEEEecCCCcchhhhhhhhhccCCCcE-EEEcCCcCHHHHHHHHhhcC-
Confidence 48999999999999999999 454 78998876321 1 0 0 1124688 89999999999999988764
Q ss_pred ccceEEeecccCCc-----hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCC
Q 028258 82 EITNLFWVPLQVQE-----SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVP 156 (211)
Q Consensus 82 ~~~~v~~~a~~~~~-----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~ 156 (211)
+|.|||+++.... ++...+++|+.++.++++++.+. ..+ .+++++||..+|+.... ..+
T Consensus 74 -~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~-~~~i~~Ss~~v~g~~~~-----------~~~ 137 (317)
T TIGR01181 74 -PDAVVHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKY---WHE-FRFHHISTDEVYGDLEK-----------GDA 137 (317)
T ss_pred -CCEEEEcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhc---CCC-ceEEEeeccceeCCCCC-----------CCC
Confidence 7999999986432 34556789999999999999875 222 36899999999975311 225
Q ss_pred CcCCCCCCCCCCcchh-----HHHHHhh--cCCCceEEEecCCceEecCC
Q 028258 157 FKEDSSRLPFPNFYYE-----LEDVSAS--YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 157 ~~e~~~~~~~~~~~~~-----~e~~l~~--~~~~~~~~i~Rp~~i~G~~~ 199 (211)
.+|+.+.. |...|. .|.++.. ...+++++++||+.+||+..
T Consensus 138 ~~e~~~~~--~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~i~G~~~ 185 (317)
T TIGR01181 138 FTETTPLA--PSSPYSASKAASDHLVRAYHRTYGLPALITRCSNNYGPYQ 185 (317)
T ss_pred cCCCCCCC--CCCchHHHHHHHHHHHHHHHHHhCCCeEEEEeccccCCCC
Confidence 66666532 333333 3333333 35689999999999999864
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor. |
| >TIGR01179 galE UDP-glucose-4-epimerase | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.3e-19 Score=149.88 Aligned_cols=163 Identities=18% Similarity=0.151 Sum_probs=119.9
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----C-CCCCceeEEEeeCCCHHHHHHHHHhcccccc
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----F-PTALVDRYITFDALDPTDTALKLSLISQEIT 84 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----~-~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~ 84 (211)
+||||||||+||++++++|+ +.|++|++++|...... . ...+++ ++.+|+++++.+.++++... +|
T Consensus 1 kvlV~GatG~iG~~l~~~l~-----~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~--~d 72 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLL-----ESGHEVVVLDNLSNGSPEALKRGERITRVT-FVEGDLRDRELLDRLFEEHK--ID 72 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHH-----hCCCeEEEEeCCCccchhhhhhhccccceE-EEECCCCCHHHHHHHHHhCC--Cc
Confidence 58999999999999999999 68999998866332210 0 012577 88999999999998887643 89
Q ss_pred eEEeecccCCc-----hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcC
Q 028258 85 NLFWVPLQVQE-----SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKE 159 (211)
Q Consensus 85 ~v~~~a~~~~~-----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e 159 (211)
+|+|+++.... ++.+.++.|+.++.++++++.+. ++++++++||..+|+.+. ..+++|
T Consensus 73 ~vv~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~~v~~ss~~~~g~~~------------~~~~~e 135 (328)
T TIGR01179 73 AVIHFAGLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQT-----GVKKFIFSSSAAVYGEPS------------SIPISE 135 (328)
T ss_pred EEEECccccCcchhhcCchhhhhhhHHHHHHHHHHHHhc-----CCCEEEEecchhhcCCCC------------CCCccc
Confidence 99999986432 33456788999999999999876 567899999988886421 235677
Q ss_pred CCCCCCCCCcchh-----HHHHHhh--cC-CCceEEEecCCceEecCCC
Q 028258 160 DSSRLPFPNFYYE-----LEDVSAS--YS-PAITYSVHRSSVIIGASPR 200 (211)
Q Consensus 160 ~~~~~~~~~~~~~-----~e~~l~~--~~-~~~~~~i~Rp~~i~G~~~~ 200 (211)
+++.. +...|. .|.++.. +. .+++++++||+.+||+.+.
T Consensus 136 ~~~~~--~~~~y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~g~~~~ 182 (328)
T TIGR01179 136 DSPLG--PINPYGRSKLMSERILRDLSKADPGLSYVILRYFNVAGADPE 182 (328)
T ss_pred cCCCC--CCCchHHHHHHHHHHHHHHHHhccCCCEEEEecCcccCCCCC
Confidence 77643 333333 3444433 23 7899999999999998653
|
This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately. |
| >PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.3e-20 Score=143.45 Aligned_cols=148 Identities=21% Similarity=0.259 Sum_probs=110.8
Q ss_pred EEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccceEEeecc
Q 028258 12 ALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITNLFWVPL 91 (211)
Q Consensus 12 ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~~~a~ 91 (211)
|+|+||||++|++++++|+ ++|++|+++.|++.+... ..+++ ++.+|+.|++.+.+++++ +|+||++++
T Consensus 1 I~V~GatG~vG~~l~~~L~-----~~~~~V~~~~R~~~~~~~-~~~~~-~~~~d~~d~~~~~~al~~----~d~vi~~~~ 69 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLL-----RRGHEVTALVRSPSKAED-SPGVE-IIQGDLFDPDSVKAALKG----ADAVIHAAG 69 (183)
T ss_dssp EEEETTTSHHHHHHHHHHH-----HTTSEEEEEESSGGGHHH-CTTEE-EEESCTTCHHHHHHHHTT----SSEEEECCH
T ss_pred eEEECCCChHHHHHHHHHH-----HCCCEEEEEecCchhccc-ccccc-cceeeehhhhhhhhhhhh----cchhhhhhh
Confidence 7999999999999999999 688999999999875432 68999 999999999999999996 588999986
Q ss_pred cCCchhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCCCCCCCCCcch
Q 028258 92 QVQESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYY 171 (211)
Q Consensus 92 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~~~~~~~~~~~ 171 (211)
....+ ...+.++++++++. ++++++++|+..+|..+.. ....+..+ ....|+
T Consensus 70 ~~~~~--------~~~~~~~~~a~~~~-----~~~~~v~~s~~~~~~~~~~------------~~~~~~~~---~~~~~~ 121 (183)
T PF13460_consen 70 PPPKD--------VDAAKNIIEAAKKA-----GVKRVVYLSSAGVYRDPPG------------LFSDEDKP---IFPEYA 121 (183)
T ss_dssp STTTH--------HHHHHHHHHHHHHT-----TSSEEEEEEETTGTTTCTS------------EEEGGTCG---GGHHHH
T ss_pred hhccc--------cccccccccccccc-----ccccceeeeccccCCCCCc------------cccccccc---chhhhH
Confidence 55431 55678899999987 6889999999887753210 00111111 112233
Q ss_pred h----HHHHHhhcCCCceEEEecCCceEecCCC
Q 028258 172 E----LEDVSASYSPAITYSVHRSSVIIGASPR 200 (211)
Q Consensus 172 ~----~e~~l~~~~~~~~~~i~Rp~~i~G~~~~ 200 (211)
. .|+.+. ..+++|+++||+.+||+...
T Consensus 122 ~~~~~~e~~~~--~~~~~~~ivrp~~~~~~~~~ 152 (183)
T PF13460_consen 122 RDKREAEEALR--ESGLNWTIVRPGWIYGNPSR 152 (183)
T ss_dssp HHHHHHHHHHH--HSTSEEEEEEESEEEBTTSS
T ss_pred HHHHHHHHHHH--hcCCCEEEEECcEeEeCCCc
Confidence 2 233343 36999999999999998743
|
... |
| >KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.83 E-value=7.3e-20 Score=146.91 Aligned_cols=158 Identities=18% Similarity=0.189 Sum_probs=122.2
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC------CCCCCCCCceeEEEeeCCCHHHHHHHHHhcccc
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP------PGWFPTALVDRYITFDALDPTDTALKLSLISQE 82 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~------~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~ 82 (211)
.++|+||||.||||+|||+.|. .+|++|++++.-.. ..|..+++++ .+..|+..+ .+..
T Consensus 27 ~lrI~itGgaGFIgSHLvdkLm-----~egh~VIa~Dn~ftg~k~n~~~~~~~~~fe-l~~hdv~~p-----l~~e---- 91 (350)
T KOG1429|consen 27 NLRILITGGAGFIGSHLVDKLM-----TEGHEVIALDNYFTGRKENLEHWIGHPNFE-LIRHDVVEP-----LLKE---- 91 (350)
T ss_pred CcEEEEecCcchHHHHHHHHHH-----hcCCeEEEEecccccchhhcchhccCccee-EEEeechhH-----HHHH----
Confidence 5789999999999999999999 78999999987432 1345678899 999999765 4454
Q ss_pred cceEEeecccCCc-----hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCC
Q 028258 83 ITNLFWVPLQVQE-----SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPF 157 (211)
Q Consensus 83 ~~~v~~~a~~~~~-----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~ 157 (211)
+|+|+|+|+..++ ++.+.+..|..++.+++..+++. + ++|++.|++.+||.|.. .|.
T Consensus 92 vD~IyhLAapasp~~y~~npvktIktN~igtln~lglakrv-----~-aR~l~aSTseVYgdp~~------------hpq 153 (350)
T KOG1429|consen 92 VDQIYHLAAPASPPHYKYNPVKTIKTNVIGTLNMLGLAKRV-----G-ARFLLASTSEVYGDPLV------------HPQ 153 (350)
T ss_pred hhhhhhhccCCCCcccccCccceeeecchhhHHHHHHHHHh-----C-ceEEEeecccccCCccc------------CCC
Confidence 6889999988654 56778899999999999988876 2 78899999999998753 233
Q ss_pred cCCC---CCCCCCCcchhHHHHHhh-------cCCCceEEEecCCceEecCC
Q 028258 158 KEDS---SRLPFPNFYYELEDVSAS-------YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 158 ~e~~---~~~~~~~~~~~~e~~l~~-------~~~~~~~~i~Rp~~i~G~~~ 199 (211)
.|+. .....|...|..+|.+.+ ++.|+.+.|.|+.+.|||..
T Consensus 154 ~e~ywg~vnpigpr~cydegKr~aE~L~~~y~k~~giE~rIaRifNtyGPrm 205 (350)
T KOG1429|consen 154 VETYWGNVNPIGPRSCYDEGKRVAETLCYAYHKQEGIEVRIARIFNTYGPRM 205 (350)
T ss_pred ccccccccCcCCchhhhhHHHHHHHHHHHHhhcccCcEEEEEeeecccCCcc
Confidence 3322 111245666766666555 56899999999999999975
|
|
| >TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.4e-19 Score=151.05 Aligned_cols=153 Identities=18% Similarity=0.173 Sum_probs=111.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCC--cEEEEEeCCCCCCC-----CCCCCceeEEEeeCCCHHHHHHHHHhcc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSP--WKVYGAARRPPPGW-----FPTALVDRYITFDALDPTDTALKLSLIS 80 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g--~~V~~~~R~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~~~~ 80 (211)
++|++|||||+||||++++++|+ ++| ++|++++|+..... ....+++ ++.+|++|++.+.+++++
T Consensus 3 ~~k~vLVTGatG~IG~~l~~~L~-----~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~-~v~~Dl~d~~~l~~~~~~-- 74 (324)
T TIGR03589 3 NNKSILITGGTGSFGKAFISRLL-----ENYNPKKIIIYSRDELKQWEMQQKFPAPCLR-FFIGDVRDKERLTRALRG-- 74 (324)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHH-----HhCCCcEEEEEcCChhHHHHHHHHhCCCcEE-EEEccCCCHHHHHHHHhc--
Confidence 45889999999999999999999 454 78999988754311 1124688 999999999999888875
Q ss_pred cccceEEeecccCC-----chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCC
Q 028258 81 QEITNLFWVPLQVQ-----ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEV 155 (211)
Q Consensus 81 ~~~~~v~~~a~~~~-----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~ 155 (211)
+|+|||+|+... .++.+.+++|+.++.++++++.+. ++++|+++||...+
T Consensus 75 --iD~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~-----~~~~iV~~SS~~~~------------------ 129 (324)
T TIGR03589 75 --VDYVVHAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDN-----GVKRVVALSTDKAA------------------ 129 (324)
T ss_pred --CCEEEECcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEEeCCCCC------------------
Confidence 689999998642 134567899999999999999976 56789998873211
Q ss_pred CCcCCCCCCCCCCcchhHHHHHhh-----cCCCceEEEecCCceEecC
Q 028258 156 PFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 156 ~~~e~~~~~~~~~~~~~~e~~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
.|..+........|.++.. +..+++++++||+.+||++
T Consensus 130 -----~p~~~Y~~sK~~~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~ 172 (324)
T TIGR03589 130 -----NPINLYGATKLASDKLFVAANNISGSKGTRFSVVRYGNVVGSR 172 (324)
T ss_pred -----CCCCHHHHHHHHHHHHHHHHHhhccccCcEEEEEeecceeCCC
Confidence 0100000111223443322 3468999999999999985
|
This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. |
| >PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Probab=99.82 E-value=9.9e-20 Score=156.99 Aligned_cols=156 Identities=17% Similarity=0.124 Sum_probs=115.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC---------CCCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW---------FPTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~---------~~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
.+++|||||||||||++++++|+ ++||+|++++|+..... ...++++ ++.+|++|++.+.+++++
T Consensus 59 ~~~kVLVtGatG~IG~~l~~~Ll-----~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~-~v~~Dl~d~~~l~~~~~~ 132 (390)
T PLN02657 59 KDVTVLVVGATGYIGKFVVRELV-----RRGYNVVAVAREKSGIRGKNGKEDTKKELPGAE-VVFGDVTDADSLRKVLFS 132 (390)
T ss_pred CCCEEEEECCCcHHHHHHHHHHH-----HCCCEEEEEEechhhccccchhhHHhhhcCCce-EEEeeCCCHHHHHHHHHH
Confidence 45789999999999999999999 68999999999764311 0135789 999999999999999886
Q ss_pred cccccceEEeecccCCchhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCc
Q 028258 79 ISQEITNLFWVPLQVQESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFK 158 (211)
Q Consensus 79 ~~~~~~~v~~~a~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~ 158 (211)
....+|+||||++.......+.+++|..++.++++++++. ++++|+++|+..+|. |..
T Consensus 133 ~~~~~D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~-----gv~r~V~iSS~~v~~-----------------p~~ 190 (390)
T PLN02657 133 EGDPVDVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREV-----GAKHFVLLSAICVQK-----------------PLL 190 (390)
T ss_pred hCCCCcEEEECCccCCCCCccchhhHHHHHHHHHHHHHHc-----CCCEEEEEeeccccC-----------------cch
Confidence 4212799999987543333456788999999999999886 678999998865442 100
Q ss_pred CCCCCCCCCCcchhHHHHHhhcCCCceEEEecCCceEec
Q 028258 159 EDSSRLPFPNFYYELEDVSASYSPAITYSVHRSSVIIGA 197 (211)
Q Consensus 159 e~~~~~~~~~~~~~~e~~l~~~~~~~~~~i~Rp~~i~G~ 197 (211)
+ ........|+.+..+..+++|+|+||+.+||.
T Consensus 191 ~------~~~sK~~~E~~l~~~~~gl~~tIlRp~~~~~~ 223 (390)
T PLN02657 191 E------FQRAKLKFEAELQALDSDFTYSIVRPTAFFKS 223 (390)
T ss_pred H------HHHHHHHHHHHHHhccCCCCEEEEccHHHhcc
Confidence 0 00112233444432247899999999999985
|
|
| >PRK10084 dTDP-glucose 4,6 dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.7e-19 Score=151.91 Aligned_cols=177 Identities=11% Similarity=0.034 Sum_probs=118.9
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcE-EEEEeCCCCC-C-----CC-CCCCceeEEEeeCCCHHHHHHHHHhcccc
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWK-VYGAARRPPP-G-----WF-PTALVDRYITFDALDPTDTALKLSLISQE 82 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~-V~~~~R~~~~-~-----~~-~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~ 82 (211)
+|||||||||||++|+++|+ ++|++ |++++|.... . .. ....++ ++.+|++|.+++.+++++..
T Consensus 2 kilITGgtG~iG~~l~~~L~-----~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~~~~~~~~~~-- 73 (352)
T PRK10084 2 KILVTGGAGFIGSAVVRHII-----NNTQDSVVNVDKLTYAGNLESLADVSDSERYV-FEHADICDRAELDRIFAQHQ-- 73 (352)
T ss_pred eEEEECCCcHHhHHHHHHHH-----HhCCCeEEEecCCCccchHHHHHhcccCCceE-EEEecCCCHHHHHHHHHhcC--
Confidence 69999999999999999999 57765 6666653211 0 00 124577 89999999999999988653
Q ss_pred cceEEeecccCCc-----hhHHHHhhcHHHHHHHHHHHHhcCCC----CCCceEEEEeecCeeeecccCCccccCCCCCC
Q 028258 83 ITNLFWVPLQVQE-----SEEVNIFKNSTMLKNVLSVLVSSNSG----RSRLRHVALLTGTKHYMGPIFDPSLAGQLMPY 153 (211)
Q Consensus 83 ~~~v~~~a~~~~~-----~~~~~~~~n~~~~~~l~~~~~~~~~~----~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~ 153 (211)
+|.|||+|+.... ++...+++|+.++.++++++...+.. ..++++|+++||..+|+....+....... .
T Consensus 74 ~d~vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~--~ 151 (352)
T PRK10084 74 PDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSE--E 151 (352)
T ss_pred CCEEEECCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccccc--c
Confidence 7999999986431 34567899999999999999763100 01356899999989997421000000000 0
Q ss_pred CCCCcCCCCCCCCCCcchhH-----HHHHhh--cCCCceEEEecCCceEecCC
Q 028258 154 EVPFKEDSSRLPFPNFYYEL-----EDVSAS--YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 154 ~~~~~e~~~~~~~~~~~~~~-----e~~l~~--~~~~~~~~i~Rp~~i~G~~~ 199 (211)
..+++|+.+.. |...|.. |.++.. +..+++++++||+.+|||..
T Consensus 152 ~~~~~E~~~~~--p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~ 202 (352)
T PRK10084 152 LPLFTETTAYA--PSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYH 202 (352)
T ss_pred CCCccccCCCC--CCChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCc
Confidence 12366776642 3333443 333332 34689999999999999974
|
|
| >PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1 | Back alignment and domain information |
|---|
Probab=99.82 E-value=6.8e-20 Score=151.87 Aligned_cols=152 Identities=21% Similarity=0.234 Sum_probs=106.9
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccceEEee
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITNLFWV 89 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~~~ 89 (211)
++||||||||++|++|.++|. ..||+|+++.|. .+|+.|.+.+.+.++... +|+||||
T Consensus 1 MriLI~GasG~lG~~l~~~l~-----~~~~~v~~~~r~---------------~~dl~d~~~~~~~~~~~~--pd~Vin~ 58 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALK-----ERGYEVIATSRS---------------DLDLTDPEAVAKLLEAFK--PDVVINC 58 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHT-----TTSEEEEEESTT---------------CS-TTSHHHHHHHHHHH----SEEEE-
T ss_pred CEEEEECCCCHHHHHHHHHHh-----hCCCEEEEeCch---------------hcCCCCHHHHHHHHHHhC--CCeEecc
Confidence 369999999999999999999 689999999765 378899999999998876 8999999
Q ss_pred cccCCc-----hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCCCCC
Q 028258 90 PLQVQE-----SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRL 164 (211)
Q Consensus 90 a~~~~~-----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~~~~ 164 (211)
|+.... ++...+++|+.++.+|.+++... + .+++++||..||.+. ...|++|+++.
T Consensus 59 aa~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~-----~-~~li~~STd~VFdG~------------~~~~y~E~d~~- 119 (286)
T PF04321_consen 59 AAYTNVDACEKNPEEAYAINVDATKNLAEACKER-----G-ARLIHISTDYVFDGD------------KGGPYTEDDPP- 119 (286)
T ss_dssp -----HHHHHHSHHHHHHHHTHHHHHHHHHHHHC-----T--EEEEEEEGGGS-SS------------TSSSB-TTS---
T ss_pred ceeecHHhhhhChhhhHHHhhHHHHHHHHHHHHc-----C-CcEEEeeccEEEcCC------------cccccccCCCC-
Confidence 988653 45567899999999999999886 2 477899999998642 24578888873
Q ss_pred CCCCcchhHHHHHhh---cCCCceEEEecCCceEecCCCCCC
Q 028258 165 PFPNFYYELEDVSAS---YSPAITYSVHRSSVIIGASPRSLY 203 (211)
Q Consensus 165 ~~~~~~~~~e~~l~~---~~~~~~~~i~Rp~~i~G~~~~~~~ 203 (211)
.|...|...|+..| +...-+++|+|++.+||+...+++
T Consensus 120 -~P~~~YG~~K~~~E~~v~~~~~~~~IlR~~~~~g~~~~~~~ 160 (286)
T PF04321_consen 120 -NPLNVYGRSKLEGEQAVRAACPNALILRTSWVYGPSGRNFL 160 (286)
T ss_dssp ---SSHHHHHHHHHHHHHHHH-SSEEEEEE-SEESSSSSSHH
T ss_pred -CCCCHHHHHHHHHHHHHHHhcCCEEEEecceecccCCCchh
Confidence 45555555444444 112239999999999999665554
|
1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. |
| >COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.82 E-value=2e-19 Score=146.54 Aligned_cols=155 Identities=17% Similarity=0.212 Sum_probs=125.3
Q ss_pred EEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccceEEeecc
Q 028258 12 ALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITNLFWVPL 91 (211)
Q Consensus 12 ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~~~a~ 91 (211)
+||||++|.+|++|++.|. .+++|++++|.. +|++|++.+.+.+.... ||.|||+|+
T Consensus 3 iLi~G~~GqLG~~L~~~l~------~~~~v~a~~~~~---------------~Ditd~~~v~~~i~~~~--PDvVIn~AA 59 (281)
T COG1091 3 ILITGANGQLGTELRRALP------GEFEVIATDRAE---------------LDITDPDAVLEVIRETR--PDVVINAAA 59 (281)
T ss_pred EEEEcCCChHHHHHHHHhC------CCceEEeccCcc---------------ccccChHHHHHHHHhhC--CCEEEECcc
Confidence 9999999999999999986 568999998752 79999999999999875 899999998
Q ss_pred cCCc-----hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCCCCCCC
Q 028258 92 QVQE-----SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPF 166 (211)
Q Consensus 92 ~~~~-----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~~~~~~ 166 (211)
.+.. .++..+.+|..++.|+.+++.+. + ..++++|+.-||. |. ...|+.|+++ +.
T Consensus 60 yt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~---g---a~lVhiSTDyVFD---------G~---~~~~Y~E~D~--~~ 119 (281)
T COG1091 60 YTAVDKAESEPELAFAVNATGAENLARAAAEV---G---ARLVHISTDYVFD---------GE---KGGPYKETDT--PN 119 (281)
T ss_pred ccccccccCCHHHHHHhHHHHHHHHHHHHHHh---C---CeEEEeecceEec---------CC---CCCCCCCCCC--CC
Confidence 8653 34567899999999999999987 3 3567888766654 43 2467889887 35
Q ss_pred CCcchhHHHHHhh---cCCCceEEEecCCceEecCCCCCCCCCCCC
Q 028258 167 PNFYYELEDVSAS---YSPAITYSVHRSSVIIGASPRSLYXXXXXX 209 (211)
Q Consensus 167 ~~~~~~~e~~l~~---~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~ 209 (211)
|..+|...|++.| +..+-..+|+|.+++||...+||...++.+
T Consensus 120 P~nvYG~sKl~GE~~v~~~~~~~~I~Rtswv~g~~g~nFv~tml~l 165 (281)
T COG1091 120 PLNVYGRSKLAGEEAVRAAGPRHLILRTSWVYGEYGNNFVKTMLRL 165 (281)
T ss_pred ChhhhhHHHHHHHHHHHHhCCCEEEEEeeeeecCCCCCHHHHHHHH
Confidence 6778888888777 456679999999999999888886555443
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=3.4e-19 Score=162.78 Aligned_cols=165 Identities=18% Similarity=0.144 Sum_probs=113.5
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHH--HHHHHHhccc
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTD--TALKLSLISQ 81 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~--~~~~~~~~~~ 81 (211)
+|||||||||||++|+++|+++ ..|++|++++|+..... ....+++ ++.+|++|++. ....++.+..
T Consensus 2 ~ILVTGatGfIG~~lv~~Ll~~---~~g~~V~~l~R~~~~~~~~~~~~~~~~~~v~-~~~~Dl~~~~~~~~~~~~~~l~~ 77 (657)
T PRK07201 2 RYFVTGGTGFIGRRLVSRLLDR---RREATVHVLVRRQSLSRLEALAAYWGADRVV-PLVGDLTEPGLGLSEADIAELGD 77 (657)
T ss_pred eEEEeCCccHHHHHHHHHHHhc---CCCCEEEEEECcchHHHHHHHHHhcCCCcEE-EEecccCCccCCcCHHHHHHhcC
Confidence 6999999999999999999931 36899999999653210 0125688 99999998531 0111222222
Q ss_pred ccceEEeecccCC--chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcC
Q 028258 82 EITNLFWVPLQVQ--ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKE 159 (211)
Q Consensus 82 ~~~~v~~~a~~~~--~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e 159 (211)
+|+|||||+... .++....++|+.++.++++++.+. ++++|+++||..+|+.. ..+.+|
T Consensus 78 -~D~Vih~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~-----~~~~~v~~SS~~v~g~~-------------~~~~~e 138 (657)
T PRK07201 78 -IDHVVHLAAIYDLTADEEAQRAANVDGTRNVVELAERL-----QAATFHHVSSIAVAGDY-------------EGVFRE 138 (657)
T ss_pred -CCEEEECceeecCCCCHHHHHHHHhHHHHHHHHHHHhc-----CCCeEEEEeccccccCc-------------cCcccc
Confidence 899999998643 245567789999999999999876 57899999999998742 112333
Q ss_pred CCCCC-CCCCcchh-----HHHHHhhcCCCceEEEecCCceEecCC
Q 028258 160 DSSRL-PFPNFYYE-----LEDVSASYSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 160 ~~~~~-~~~~~~~~-----~e~~l~~~~~~~~~~i~Rp~~i~G~~~ 199 (211)
+.... ..+...|. .|+++.+ ..+++++++||+.|||+..
T Consensus 139 ~~~~~~~~~~~~Y~~sK~~~E~~~~~-~~g~~~~ilRp~~v~G~~~ 183 (657)
T PRK07201 139 DDFDEGQGLPTPYHRTKFEAEKLVRE-ECGLPWRVYRPAVVVGDSR 183 (657)
T ss_pred ccchhhcCCCCchHHHHHHHHHHHHH-cCCCcEEEEcCCeeeecCC
Confidence 32111 11112233 3444432 5689999999999999865
|
|
| >TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase | Back alignment and domain information |
|---|
Probab=99.81 E-value=4.1e-19 Score=148.14 Aligned_cols=161 Identities=14% Similarity=0.035 Sum_probs=110.4
Q ss_pred EEEEcCCChHHHHHHHHhhCCCCCCCCc-EEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHh-cccccceEEee
Q 028258 12 ALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSL-ISQEITNLFWV 89 (211)
Q Consensus 12 ilVtGatG~iG~~l~~~L~~~~~~~~g~-~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~-~~~~~~~v~~~ 89 (211)
|||||||||||+++++.|+ +.|+ +|++++|.........-... .+..|+.+.+.+....+. ... +|+|+|+
T Consensus 1 ilItGatG~iG~~l~~~L~-----~~g~~~v~~~~~~~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~~~~~~-~D~vvh~ 73 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALN-----ERGITDILVVDNLRDGHKFLNLADL-VIADYIDKEDFLDRLEKGAFGK-IEAIFHQ 73 (314)
T ss_pred CEEeCCcchhhHHHHHHHH-----HcCCceEEEEecCCCchhhhhhhhe-eeeccCcchhHHHHHHhhccCC-CCEEEEC
Confidence 6999999999999999999 6887 78888775432211111124 567888887766555441 122 8999999
Q ss_pred cccCC---chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCCCCCCC
Q 028258 90 PLQVQ---ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPF 166 (211)
Q Consensus 90 a~~~~---~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~~~~~~ 166 (211)
|+... .++...+++|+.++.++++++.+. ++ +|+++||+.+|+.+ ..+.+|+++.. .
T Consensus 74 A~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-----~~-~~v~~SS~~vy~~~-------------~~~~~e~~~~~-~ 133 (314)
T TIGR02197 74 GACSDTTETDGEYMMENNYQYSKRLLDWCAEK-----GI-PFIYASSAATYGDG-------------EAGFREGRELE-R 133 (314)
T ss_pred ccccCccccchHHHHHHHHHHHHHHHHHHHHh-----CC-cEEEEccHHhcCCC-------------CCCcccccCcC-C
Confidence 98643 245567789999999999999886 34 68999999999742 12345554422 2
Q ss_pred CCcchhH-----HHHHhh----cCCCceEEEecCCceEecCC
Q 028258 167 PNFYYEL-----EDVSAS----YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 167 ~~~~~~~-----e~~l~~----~~~~~~~~i~Rp~~i~G~~~ 199 (211)
|...|.. |.++.+ ...+++++++||+.+||+..
T Consensus 134 p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~lR~~~vyG~~~ 175 (314)
T TIGR02197 134 PLNVYGYSKFLFDQYVRRRVLPEALSAQVVGLRYFNVYGPRE 175 (314)
T ss_pred CCCHHHHHHHHHHHHHHHHhHhhccCCceEEEEEeeccCCCC
Confidence 3333433 333332 13467999999999999975
|
This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370). |
| >TIGR01777 yfcH conserved hypothetical protein TIGR01777 | Back alignment and domain information |
|---|
Probab=99.81 E-value=7e-19 Score=145.07 Aligned_cols=157 Identities=13% Similarity=0.119 Sum_probs=102.9
Q ss_pred EEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccceEEeecc
Q 028258 12 ALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITNLFWVPL 91 (211)
Q Consensus 12 ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~~~a~ 91 (211)
|||||||||||++++++|+ ++||+|++++|++...... .... ..|+.. ..+.+.+.+ +|.|||+++
T Consensus 1 vlVtGatG~iG~~l~~~L~-----~~g~~V~~~~r~~~~~~~~-~~~~---~~~~~~-~~~~~~~~~----~D~Vvh~a~ 66 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLT-----KDGHEVTILTRSPPAGANT-KWEG---YKPWAP-LAESEALEG----ADAVINLAG 66 (292)
T ss_pred CEEEcccchhhHHHHHHHH-----HcCCEEEEEeCCCCCCCcc-ccee---eecccc-cchhhhcCC----CCEEEECCC
Confidence 6999999999999999999 6899999999987653210 1011 112222 223333433 789999998
Q ss_pred cCCc-------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCCCCC
Q 028258 92 QVQE-------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRL 164 (211)
Q Consensus 92 ~~~~-------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~~~~ 164 (211)
.... .+...+++|+.++.++++++++. +.+..++++.|+..+|+.. ...+++|+.+.
T Consensus 67 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~---~~~~~~~i~~S~~~~yg~~------------~~~~~~E~~~~- 130 (292)
T TIGR01777 67 EPIADKRWTEERKQEIRDSRIDTTRALVEAIAAA---EQKPKVFISASAVGYYGTS------------EDRVFTEEDSP- 130 (292)
T ss_pred CCcccccCCHHHHHHHHhcccHHHHHHHHHHHhc---CCCceEEEEeeeEEEeCCC------------CCCCcCcccCC-
Confidence 6431 23456788999999999999886 2222456666666777632 13466777642
Q ss_pred CCCCcchh-----HHHHHhh-cCCCceEEEecCCceEecCC
Q 028258 165 PFPNFYYE-----LEDVSAS-YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 165 ~~~~~~~~-----~e~~l~~-~~~~~~~~i~Rp~~i~G~~~ 199 (211)
.+..++. .|..+.. ++.+++++++||+.+||+..
T Consensus 131 -~~~~~~~~~~~~~e~~~~~~~~~~~~~~ilR~~~v~G~~~ 170 (292)
T TIGR01777 131 -AGDDFLAELCRDWEEAAQAAEDLGTRVVLLRTGIVLGPKG 170 (292)
T ss_pred -CCCChHHHHHHHHHHHhhhchhcCCceEEEeeeeEECCCc
Confidence 2222322 2333322 34689999999999999864
|
This model represents a clade of proteins of unknown function including the E. coli yfcH protein. |
| >PLN00016 RNA-binding protein; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=4.2e-19 Score=152.51 Aligned_cols=151 Identities=19% Similarity=0.162 Sum_probs=110.2
Q ss_pred CCCeEEEE----cCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC------------CCCCCceeEEEeeCCCHHH
Q 028258 8 PKSVALII----GVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW------------FPTALVDRYITFDALDPTD 71 (211)
Q Consensus 8 ~~~~ilVt----GatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~------------~~~~~~~~~i~~Dl~d~~~ 71 (211)
++++|||| |||||||++|+++|+ ++||+|++++|++.... +...+++ ++.+|+.|
T Consensus 51 ~~~~VLVt~~~~GatG~iG~~lv~~L~-----~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~-~v~~D~~d--- 121 (378)
T PLN00016 51 EKKKVLIVNTNSGGHAFIGFYLAKELV-----KAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVK-TVWGDPAD--- 121 (378)
T ss_pred ccceEEEEeccCCCceeEhHHHHHHHH-----HCCCEEEEEecCCcchhhhccCchhhhhHhhhcCce-EEEecHHH---
Confidence 45789999 999999999999999 68999999999865311 0123588 99999977
Q ss_pred HHHHHHhcccccceEEeecccCCchhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCC
Q 028258 72 TALKLSLISQEITNLFWVPLQVQESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLM 151 (211)
Q Consensus 72 ~~~~~~~~~~~~~~v~~~a~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~ 151 (211)
+.+.+.... +|+|||+++. +..++.++++++++. ++++|+++||..+|+...
T Consensus 122 ~~~~~~~~~--~d~Vi~~~~~-----------~~~~~~~ll~aa~~~-----gvkr~V~~SS~~vyg~~~---------- 173 (378)
T PLN00016 122 VKSKVAGAG--FDVVYDNNGK-----------DLDEVEPVADWAKSP-----GLKQFLFCSSAGVYKKSD---------- 173 (378)
T ss_pred HHhhhccCC--ccEEEeCCCC-----------CHHHHHHHHHHHHHc-----CCCEEEEEccHhhcCCCC----------
Confidence 444443322 7899998642 234567899999876 688999999999997421
Q ss_pred CCCCCCcCCCCCCCCCCcchhHHHHHhhcCCCceEEEecCCceEecCCC
Q 028258 152 PYEVPFKEDSSRLPFPNFYYELEDVSASYSPAITYSVHRSSVIIGASPR 200 (211)
Q Consensus 152 ~~~~~~~e~~~~~~~~~~~~~~e~~l~~~~~~~~~~i~Rp~~i~G~~~~ 200 (211)
..|..|+.+..+. ......|.++.+ .+++|+++||+.+||+...
T Consensus 174 --~~p~~E~~~~~p~-~sK~~~E~~l~~--~~l~~~ilRp~~vyG~~~~ 217 (378)
T PLN00016 174 --EPPHVEGDAVKPK-AGHLEVEAYLQK--LGVNWTSFRPQYIYGPGNN 217 (378)
T ss_pred --CCCCCCCCcCCCc-chHHHHHHHHHH--cCCCeEEEeceeEECCCCC
Confidence 2355666553221 234555666653 6899999999999998753
|
|
| >COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.3e-18 Score=143.84 Aligned_cols=173 Identities=16% Similarity=0.135 Sum_probs=120.3
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC---------------C--CCCCCceeEEEeeCCCHH--
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG---------------W--FPTALVDRYITFDALDPT-- 70 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~---------------~--~~~~~~~~~i~~Dl~d~~-- 70 (211)
+++|+||||||+|++|+++|+. ....+|+|+.|..+.. | ....+++ ++.+|+..+.
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~----~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~-vv~gDl~e~~lG 75 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLD----RSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVE-VVAGDLAEPDLG 75 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHh----cCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEE-EEecccccccCC
Confidence 5799999999999999999995 3446899999976620 1 1247889 9999999663
Q ss_pred ----HHHHHHHhcccccceEEeecccCCc--hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCc
Q 028258 71 ----DTALKLSLISQEITNLFWVPLQVQE--SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDP 144 (211)
Q Consensus 71 ----~~~~~~~~~~~~~~~v~~~a~~~~~--~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~ 144 (211)
.+.+..+. +|.|||+++.... ...+....|+.||..+++.+... +.|.+.|+||..++...
T Consensus 76 L~~~~~~~La~~----vD~I~H~gA~Vn~v~pYs~L~~~NVlGT~evlrLa~~g-----k~Kp~~yVSsisv~~~~---- 142 (382)
T COG3320 76 LSERTWQELAEN----VDLIIHNAALVNHVFPYSELRGANVLGTAEVLRLAATG-----KPKPLHYVSSISVGETE---- 142 (382)
T ss_pred CCHHHHHHHhhh----cceEEecchhhcccCcHHHhcCcchHhHHHHHHHHhcC-----CCceeEEEeeeeecccc----
Confidence 23333333 8999999988653 56677789999999999988764 67889999999888532
Q ss_pred cccCCCCCCCCCCcCCCCCC--------CCCCcchhHHHHHhh-cCCCceEEEecCCceEecCCCCCCC
Q 028258 145 SLAGQLMPYEVPFKEDSSRL--------PFPNFYYELEDVSAS-YSPAITYSVHRSSVIIGASPRSLYX 204 (211)
Q Consensus 145 ~~~g~~~~~~~~~~e~~~~~--------~~~~~~~~~e~~l~~-~~~~~~~~i~Rp~~i~G~~~~~~~~ 204 (211)
.+.+. ..-.+++++.. ....+++..|+++.+ ...|++++|+||+.|.|....+.+|
T Consensus 143 -~~~~~---~~~~~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~~rGLpv~I~Rpg~I~gds~tG~~n 207 (382)
T COG3320 143 -YYSNF---TVDFDEISPTRNVGQGLAGGYGRSKWVAEKLVREAGDRGLPVTIFRPGYITGDSRTGALN 207 (382)
T ss_pred -ccCCC---ccccccccccccccCccCCCcchhHHHHHHHHHHHhhcCCCeEEEecCeeeccCccCccc
Confidence 11110 11122222211 112334455666665 3449999999999999998844444
|
|
| >PLN02996 fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.79 E-value=3.5e-18 Score=151.22 Aligned_cols=121 Identities=15% Similarity=0.052 Sum_probs=90.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC--------------C--------------CCCCce
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW--------------F--------------PTALVD 59 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~--------------~--------------~~~~~~ 59 (211)
.+|+|||||||||+|++|++.|++.. .+--+|+++.|...... + ...+++
T Consensus 10 ~~k~VlvTGaTGFlG~~ll~~LL~~~--~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~ 87 (491)
T PLN02996 10 ENKTILVTGATGFLAKIFVEKILRVQ--PNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVT 87 (491)
T ss_pred CCCeEEEeCCCcHHHHHHHHHHHhhC--CCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEE
Confidence 46899999999999999999998311 01136899998654210 0 015678
Q ss_pred eEEEeeCCCH-------HHHHHHHHhcccccceEEeecccCC--chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEE
Q 028258 60 RYITFDALDP-------TDTALKLSLISQEITNLFWVPLQVQ--ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVAL 130 (211)
Q Consensus 60 ~~i~~Dl~d~-------~~~~~~~~~~~~~~~~v~~~a~~~~--~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~ 130 (211)
++.+|++++ +.+..++++ +|+|||+|+... .++...+++|+.++.++++++... .++++|++
T Consensus 88 -~i~GDl~~~~LGLs~~~~~~~l~~~----vD~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~----~~~k~~V~ 158 (491)
T PLN02996 88 -PVPGDISYDDLGVKDSNLREEMWKE----IDIVVNLAATTNFDERYDVALGINTLGALNVLNFAKKC----VKVKMLLH 158 (491)
T ss_pred -EEecccCCcCCCCChHHHHHHHHhC----CCEEEECccccCCcCCHHHHHHHHHHHHHHHHHHHHhc----CCCCeEEE
Confidence 999999843 334555553 799999998754 245667899999999999999874 25789999
Q ss_pred eecCeeeec
Q 028258 131 LTGTKHYMG 139 (211)
Q Consensus 131 ~s~~~~y~~ 139 (211)
+||+.+||.
T Consensus 159 vST~~vyG~ 167 (491)
T PLN02996 159 VSTAYVCGE 167 (491)
T ss_pred EeeeEEecC
Confidence 999999975
|
|
| >PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila | Back alignment and domain information |
|---|
Probab=99.78 E-value=4.2e-19 Score=144.25 Aligned_cols=168 Identities=17% Similarity=0.157 Sum_probs=90.9
Q ss_pred EEcCCChHHHHHHHHhhCCCCCCCCc--EEEEEeCCCCC------C----C-C---------CCCCceeEEEeeCCCHH-
Q 028258 14 IIGVTGISGLSLAEALKNPTTPGSPW--KVYGAARRPPP------G----W-F---------PTALVDRYITFDALDPT- 70 (211)
Q Consensus 14 VtGatG~iG~~l~~~L~~~~~~~~g~--~V~~~~R~~~~------~----~-~---------~~~~~~~~i~~Dl~d~~- 70 (211)
|||||||+|++|+++|++ ++. +|+++.|.... . . . ...+++ ++.+|++++.
T Consensus 1 lTGaTGflG~~ll~~Ll~-----~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~-~v~GDl~~~~l 74 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLR-----QPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIE-VVEGDLSQPNL 74 (249)
T ss_dssp EE-TTSHHHHHHHHHHHH-----HS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEE-EEE--TTSGGG
T ss_pred CcCCCcHHHHHHHHHHHc-----CCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEE-EEecccccccc
Confidence 799999999999999994 443 89999997642 0 0 0 147899 9999999874
Q ss_pred -----HHHHHHHhcccccceEEeecccCCc--hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCC
Q 028258 71 -----DTALKLSLISQEITNLFWVPLQVQE--SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFD 143 (211)
Q Consensus 71 -----~~~~~~~~~~~~~~~v~~~a~~~~~--~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~ 143 (211)
.+....+. +++|||||+.... +..+..++|+.+++++++.+... +.++|+|+||+.+.+..
T Consensus 75 GL~~~~~~~L~~~----v~~IiH~Aa~v~~~~~~~~~~~~NV~gt~~ll~la~~~-----~~~~~~~iSTa~v~~~~--- 142 (249)
T PF07993_consen 75 GLSDEDYQELAEE----VDVIIHCAASVNFNAPYSELRAVNVDGTRNLLRLAAQG-----KRKRFHYISTAYVAGSR--- 142 (249)
T ss_dssp G--HHHHHHHHHH------EEEE--SS-SBS-S--EEHHHHHHHHHHHHHHHTSS-----S---EEEEEEGGGTTS----
T ss_pred CCChHHhhccccc----cceeeecchhhhhcccchhhhhhHHHHHHHHHHHHHhc-----cCcceEEeccccccCCC---
Confidence 23333333 7999999988653 34456789999999999999864 34589999983333211
Q ss_pred ccccCCCCCCCCC--CcCCCCC-CCCCCcchhHHHHHhh-------cCCCceEEEecCCceEecCCCCCCC
Q 028258 144 PSLAGQLMPYEVP--FKEDSSR-LPFPNFYYELEDVSAS-------YSPAITYSVHRSSVIIGASPRSLYX 204 (211)
Q Consensus 144 ~~~~g~~~~~~~~--~~e~~~~-~~~~~~~~~~e~~l~~-------~~~~~~~~i~Rp~~i~G~~~~~~~~ 204 (211)
.+.. .+.+ ..+.... ......-|.+.|++.| ...|++++|+||+.|+|....+..+
T Consensus 143 ---~~~~--~~~~~~~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g~~~~G~~~ 208 (249)
T PF07993_consen 143 ---PGTI--EEKVYPEEEDDLDPPQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVGDSRTGWWN 208 (249)
T ss_dssp ---TTT----SSS-HHH--EEE--TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-SSSSS---
T ss_pred ---CCcc--cccccccccccchhhccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccccCCCceee
Confidence 1100 0111 1111110 0112234555555555 2349999999999999965544443
|
A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A. |
| >PLN00141 Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=3.5e-18 Score=138.83 Aligned_cols=163 Identities=10% Similarity=0.075 Sum_probs=110.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC---CCCCCceeEEEeeCCCH-HHHHHHH-Hhcccc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW---FPTALVDRYITFDALDP-TDTALKL-SLISQE 82 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~---~~~~~~~~~i~~Dl~d~-~~~~~~~-~~~~~~ 82 (211)
.+++||||||||+||++++++|+ .+||+|+++.|++.+.. ....+++ ++.+|++|. +.+.+.+ .+
T Consensus 16 ~~~~ilItGasG~iG~~l~~~L~-----~~g~~V~~~~R~~~~~~~~~~~~~~~~-~~~~Dl~d~~~~l~~~~~~~---- 85 (251)
T PLN00141 16 KTKTVFVAGATGRTGKRIVEQLL-----AKGFAVKAGVRDVDKAKTSLPQDPSLQ-IVRADVTEGSDKLVEAIGDD---- 85 (251)
T ss_pred cCCeEEEECCCcHHHHHHHHHHH-----hCCCEEEEEecCHHHHHHhcccCCceE-EEEeeCCCCHHHHHHHhhcC----
Confidence 45789999999999999999999 68999999999865421 1134688 999999984 5565655 23
Q ss_pred cceEEeecccCCc-hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCC
Q 028258 83 ITNLFWVPLQVQE-SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDS 161 (211)
Q Consensus 83 ~~~v~~~a~~~~~-~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~ 161 (211)
+|.||++++.... +....+++|..++.++++++.+. ++++|+++||..+|+... ..+..+..
T Consensus 86 ~d~vi~~~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~-----~~~~iV~iSS~~v~g~~~------------~~~~~~~~ 148 (251)
T PLN00141 86 SDAVICATGFRRSFDPFAPWKVDNFGTVNLVEACRKA-----GVTRFILVSSILVNGAAM------------GQILNPAY 148 (251)
T ss_pred CCEEEECCCCCcCCCCCCceeeehHHHHHHHHHHHHc-----CCCEEEEEccccccCCCc------------ccccCcch
Confidence 7889988775421 22334578888999999999876 678999999988886321 11111111
Q ss_pred CCCCCCCcc----hhHHHHHhhcCCCceEEEecCCceEecCC
Q 028258 162 SRLPFPNFY----YELEDVSASYSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 162 ~~~~~~~~~----~~~e~~l~~~~~~~~~~i~Rp~~i~G~~~ 199 (211)
........+ ...|+++. ..+++|+++||+.+++...
T Consensus 149 ~~~~~~~~~~~~k~~~e~~l~--~~gi~~~iirpg~~~~~~~ 188 (251)
T PLN00141 149 IFLNLFGLTLVAKLQAEKYIR--KSGINYTIVRPGGLTNDPP 188 (251)
T ss_pred hHHHHHHHHHHHHHHHHHHHH--hcCCcEEEEECCCccCCCC
Confidence 000000001 11233333 4689999999999998653
|
|
| >PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=4.1e-18 Score=150.87 Aligned_cols=160 Identities=14% Similarity=0.152 Sum_probs=114.7
Q ss_pred ccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----C-----------CCCCceeEEEeeCC
Q 028258 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----F-----------PTALVDRYITFDAL 67 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----~-----------~~~~~~~~i~~Dl~ 67 (211)
...+++|+||||||+|+||++++++|+ +.|++|++++|+..+.. . ...+++ ++.+|++
T Consensus 75 ~~~~~gKvVLVTGATGgIG~aLAr~LL-----k~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~-iV~gDLt 148 (576)
T PLN03209 75 LDTKDEDLAFVAGATGKVGSRTVRELL-----KLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLE-IVECDLE 148 (576)
T ss_pred cccCCCCEEEEECCCCHHHHHHHHHHH-----HCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceE-EEEecCC
Confidence 344567899999999999999999999 68999999999765321 0 013578 8999999
Q ss_pred CHHHHHHHHHhcccccceEEeecccCCc---hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCc
Q 028258 68 DPTDTALKLSLISQEITNLFWVPLQVQE---SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDP 144 (211)
Q Consensus 68 d~~~~~~~~~~~~~~~~~v~~~a~~~~~---~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~ 144 (211)
|.+++.+++.+ +|+|||+++.... ++...+++|..++.++++++... ++++||++||...+..
T Consensus 149 D~esI~~aLgg----iDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~a-----gVgRIV~VSSiga~~~----- 214 (576)
T PLN03209 149 KPDQIGPALGN----ASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVA-----KVNHFILVTSLGTNKV----- 214 (576)
T ss_pred CHHHHHHHhcC----CCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHh-----CCCEEEEEccchhccc-----
Confidence 99998888775 6889999876432 34566789999999999999876 6789999988643210
Q ss_pred cccCCCCCCCCCCcCCCCCCCCCCcc----hhHHHHHhhcCCCceEEEecCCceEecC
Q 028258 145 SLAGQLMPYEVPFKEDSSRLPFPNFY----YELEDVSASYSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 145 ~~~g~~~~~~~~~~e~~~~~~~~~~~----~~~e~~l~~~~~~~~~~i~Rp~~i~G~~ 198 (211)
+ .... .. ..-..+ ...++.+. ..|++|+++||+.++++.
T Consensus 215 ---g--------~p~~-~~-~sk~~~~~~KraaE~~L~--~sGIrvTIVRPG~L~tp~ 257 (576)
T PLN03209 215 ---G--------FPAA-IL-NLFWGVLCWKRKAEEALI--ASGLPYTIVRPGGMERPT 257 (576)
T ss_pred ---C--------cccc-ch-hhHHHHHHHHHHHHHHHH--HcCCCEEEEECCeecCCc
Confidence 0 0000 00 000112 12344443 479999999999998764
|
|
| >TIGR01746 Thioester-redct thioester reductase domain | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.6e-17 Score=140.76 Aligned_cols=162 Identities=17% Similarity=0.131 Sum_probs=110.5
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCC--cEEEEEeCCCCCC---------------CCC--C-CCceeEEEeeCCCH-
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSP--WKVYGAARRPPPG---------------WFP--T-ALVDRYITFDALDP- 69 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g--~~V~~~~R~~~~~---------------~~~--~-~~~~~~i~~Dl~d~- 69 (211)
+|||||||||||++|+++|+ ++| ++|+++.|+.... +.. . .+++ ++.+|++++
T Consensus 1 ~vlvtGatG~lG~~l~~~L~-----~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~-~~~~D~~~~~ 74 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELL-----RRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIE-VVAGDLSEPR 74 (367)
T ss_pred CEEEeccchHHHHHHHHHHH-----hCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEE-EEeCCcCccc
Confidence 58999999999999999999 566 7799999976521 000 1 4788 999999865
Q ss_pred -----HHHHHHHHhcccccceEEeecccCC--chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccC
Q 028258 70 -----TDTALKLSLISQEITNLFWVPLQVQ--ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIF 142 (211)
Q Consensus 70 -----~~~~~~~~~~~~~~~~v~~~a~~~~--~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~ 142 (211)
+.+....++ +|+|||+++... .......+.|+.++.++++++.+. +.++|+++||..+|+...
T Consensus 75 ~gl~~~~~~~~~~~----~d~vih~a~~~~~~~~~~~~~~~nv~g~~~ll~~a~~~-----~~~~~v~iSS~~v~~~~~- 144 (367)
T TIGR01746 75 LGLSDAEWERLAEN----VDTIVHNGALVNWVYPYSELRAANVLGTREVLRLAASG-----RAKPLHYVSTISVLAAID- 144 (367)
T ss_pred CCcCHHHHHHHHhh----CCEEEeCCcEeccCCcHHHHhhhhhHHHHHHHHHHhhC-----CCceEEEEccccccCCcC-
Confidence 234443333 799999998754 234556689999999999999876 567899999998886421
Q ss_pred CccccCCCCCCCCCCcCCCCCCC---CCCcchhH-----HHHHhh-cCCCceEEEecCCceEecCC
Q 028258 143 DPSLAGQLMPYEVPFKEDSSRLP---FPNFYYEL-----EDVSAS-YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 143 ~~~~~g~~~~~~~~~~e~~~~~~---~~~~~~~~-----e~~l~~-~~~~~~~~i~Rp~~i~G~~~ 199 (211)
..+..|+.+... .+...|.. |.++.+ ...+++++++||+.++|+..
T Consensus 145 -----------~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~g~~~~i~Rpg~v~G~~~ 199 (367)
T TIGR01746 145 -----------LSTVTEDDAIVTPPPGLAGGYAQSKWVAELLVREASDRGLPVTIVRPGRILGNSY 199 (367)
T ss_pred -----------CCCccccccccccccccCCChHHHHHHHHHHHHHHHhcCCCEEEECCCceeecCC
Confidence 111222222111 11122333 444433 33599999999999999743
|
It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. |
| >COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.3e-17 Score=134.13 Aligned_cols=161 Identities=20% Similarity=0.142 Sum_probs=124.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----------CCCCCceeEEEeeCCCHHHHHHHH
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----------FPTALVDRYITFDALDPTDTALKL 76 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----------~~~~~~~~~i~~Dl~d~~~~~~~~ 76 (211)
|+|++||||-||+-|++|++.|+ +.||+|+++.|+.+... ..++.++ .+.+|++|...+.+++
T Consensus 1 ~~K~ALITGITGQDGsYLa~lLL-----ekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~-l~~gDLtD~~~l~r~l 74 (345)
T COG1089 1 MGKVALITGITGQDGSYLAELLL-----EKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLH-LHYGDLTDSSNLLRIL 74 (345)
T ss_pred CCceEEEecccCCchHHHHHHHH-----hcCcEEEEEeeccccCCcccceeccccccCCceeE-EEeccccchHHHHHHH
Confidence 46899999999999999999999 79999999999754311 1235688 9999999999999999
Q ss_pred HhcccccceEEeecccCC-----chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCC
Q 028258 77 SLISQEITNLFWVPLQVQ-----ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLM 151 (211)
Q Consensus 77 ~~~~~~~~~v~~~a~~~~-----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~ 151 (211)
+.++ ||-|+|+++++. .++..+.+++..|+.+|+++++.. +++-.+|...|++..||..
T Consensus 75 ~~v~--PdEIYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~---~~~~~rfYQAStSE~fG~v----------- 138 (345)
T COG1089 75 EEVQ--PDEIYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRIL---GEKKTRFYQASTSELYGLV----------- 138 (345)
T ss_pred HhcC--chhheeccccccccccccCcceeeeechhHHHHHHHHHHHh---CCcccEEEecccHHhhcCc-----------
Confidence 9987 899999998864 356667788999999999999987 4434677888888888853
Q ss_pred CCCCCCcCCCCCCCCCCcchhHHHHHhh-------cCCCceEEEecCCc
Q 028258 152 PYEVPFKEDSSRLPFPNFYYELEDVSAS-------YSPAITYSVHRSSV 193 (211)
Q Consensus 152 ~~~~~~~e~~~~~~~~~~~~~~e~~l~~-------~~~~~~~~i~Rp~~ 193 (211)
.+.|.+|++|. .|.+.|+..|+-.- ...|+-.+.=+..+
T Consensus 139 -~~~pq~E~TPF--yPrSPYAvAKlYa~W~tvNYResYgl~AcnGILFN 184 (345)
T COG1089 139 -QEIPQKETTPF--YPRSPYAVAKLYAYWITVNYRESYGLFACNGILFN 184 (345)
T ss_pred -ccCccccCCCC--CCCCHHHHHHHHHHheeeehHhhcCceeecceeec
Confidence 26789999986 35666766655433 24566555433333
|
|
| >PLN02778 3,5-epimerase/4-reductase | Back alignment and domain information |
|---|
Probab=99.76 E-value=3.4e-17 Score=136.52 Aligned_cols=159 Identities=13% Similarity=0.031 Sum_probs=106.0
Q ss_pred CccccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcc
Q 028258 1 MEKQDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLIS 80 (211)
Q Consensus 1 ~~~~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~ 80 (211)
|..+-+.++++|||||||||||++|+++|+ ++|++|+... .|+.|.+.+...++...
T Consensus 1 ~~~~~~~~~~kiLVtG~tGfiG~~l~~~L~-----~~g~~V~~~~------------------~~~~~~~~v~~~l~~~~ 57 (298)
T PLN02778 1 SNGTAGSATLKFLIYGKTGWIGGLLGKLCQ-----EQGIDFHYGS------------------GRLENRASLEADIDAVK 57 (298)
T ss_pred CCCCCCCCCCeEEEECCCCHHHHHHHHHHH-----hCCCEEEEec------------------CccCCHHHHHHHHHhcC
Confidence 445556677899999999999999999999 6899886431 23445556666666554
Q ss_pred cccceEEeecccCCc--------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCC
Q 028258 81 QEITNLFWVPLQVQE--------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMP 152 (211)
Q Consensus 81 ~~~~~v~~~a~~~~~--------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~ 152 (211)
+|+|||+|+.... ++.+.+++|+.++.++++++++. ++++++ .||..+|+.... ...+
T Consensus 58 --~D~ViH~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~-----gv~~v~-~sS~~vy~~~~~--~p~~---- 123 (298)
T PLN02778 58 --PTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRER-----GLVLTN-YATGCIFEYDDA--HPLG---- 123 (298)
T ss_pred --CCEEEECCcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHh-----CCCEEE-EecceEeCCCCC--CCcc----
Confidence 8999999987531 34567899999999999999987 466544 455577853210 0001
Q ss_pred CCCCCcCCCCCCCCCCcchhHHHHHhh---cCCCceEEEecCCceEecC
Q 028258 153 YEVPFKEDSSRLPFPNFYYELEDVSAS---YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 153 ~~~~~~e~~~~~~~~~~~~~~e~~l~~---~~~~~~~~i~Rp~~i~G~~ 198 (211)
...+++|+++.. ++...|...|+..+ ... .+..++|++..+|+.
T Consensus 124 ~~~~~~Ee~~p~-~~~s~Yg~sK~~~E~~~~~y-~~~~~lr~~~~~~~~ 170 (298)
T PLN02778 124 SGIGFKEEDTPN-FTGSFYSKTKAMVEELLKNY-ENVCTLRVRMPISSD 170 (298)
T ss_pred cCCCCCcCCCCC-CCCCchHHHHHHHHHHHHHh-hccEEeeecccCCcc
Confidence 023466666532 33345655555554 111 267789998888865
|
|
| >PRK05865 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=3.9e-17 Score=151.06 Aligned_cols=132 Identities=20% Similarity=0.270 Sum_probs=107.3
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccceEEeec
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITNLFWVP 90 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~~~a 90 (211)
+|+|||||||||++++++|+ ++|++|++++|+..... ..+++ ++.+|++|.+.+.+++++ +|+|||+|
T Consensus 2 kILVTGATGfIGs~La~~Ll-----~~G~~Vv~l~R~~~~~~--~~~v~-~v~gDL~D~~~l~~al~~----vD~VVHlA 69 (854)
T PRK05865 2 RIAVTGASGVLGRGLTARLL-----SQGHEVVGIARHRPDSW--PSSAD-FIAADIRDATAVESAMTG----ADVVAHCA 69 (854)
T ss_pred EEEEECCCCHHHHHHHHHHH-----HCcCEEEEEECCchhhc--ccCce-EEEeeCCCHHHHHHHHhC----CCEEEECC
Confidence 69999999999999999999 68999999999754321 24688 999999999998888875 68999999
Q ss_pred ccCCchhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCCCCCCCCCcc
Q 028258 91 LQVQESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFY 170 (211)
Q Consensus 91 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~~~~~~~~~~ 170 (211)
+.... .+++|+.++.++++++.+. ++++|+++||.. .
T Consensus 70 a~~~~----~~~vNv~GT~nLLeAa~~~-----gvkr~V~iSS~~----------------------------------K 106 (854)
T PRK05865 70 WVRGR----NDHINIDGTANVLKAMAET-----GTGRIVFTSSGH----------------------------------Q 106 (854)
T ss_pred Ccccc----hHHHHHHHHHHHHHHHHHc-----CCCeEEEECCcH----------------------------------H
Confidence 76532 4678999999999999886 578888887621 2
Q ss_pred hhHHHHHhhcCCCceEEEecCCceEecCC
Q 028258 171 YELEDVSASYSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 171 ~~~e~~l~~~~~~~~~~i~Rp~~i~G~~~ 199 (211)
...|+++. ..+++++++||+++||++.
T Consensus 107 ~aaE~ll~--~~gl~~vILRp~~VYGP~~ 133 (854)
T PRK05865 107 PRVEQMLA--DCGLEWVAVRCALIFGRNV 133 (854)
T ss_pred HHHHHHHH--HcCCCEEEEEeceEeCCCh
Confidence 34455554 3689999999999999974
|
|
| >KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.74 E-value=2.9e-17 Score=131.95 Aligned_cols=168 Identities=15% Similarity=0.090 Sum_probs=123.0
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCC----CCC---CCCCCCCceeEEEeeCCCHHHHHHHHHhccc
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR----PPP---GWFPTALVDRYITFDALDPTDTALKLSLISQ 81 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~----~~~---~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~ 81 (211)
.+.++|||+.||||++.++.+..+. ..++.+.++.- ... .....++.. +++.|+.+...+...+..-+
T Consensus 6 ~~~vlItgg~gfi~Sn~~~~~~~~~---p~~~~v~idkL~~~s~~~~l~~~~n~p~yk-fv~~di~~~~~~~~~~~~~~- 80 (331)
T KOG0747|consen 6 EKNVLITGGAGFIGSNFINYLVDKY---PDYKFVNLDKLDYCSNLKNLEPVRNSPNYK-FVEGDIADADLVLYLFETEE- 80 (331)
T ss_pred cceEEEecCcCcchhhhhhhcccCC---CCCcEEEEeecccccccchhhhhccCCCce-EeeccccchHHHHhhhccCc-
Confidence 3789999999999999999998432 24555555431 111 112458899 99999999988777776543
Q ss_pred ccceEEeecccCCc-----hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCC
Q 028258 82 EITNLFWVPLQVQE-----SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVP 156 (211)
Q Consensus 82 ~~~~v~~~a~~~~~-----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~ 156 (211)
+|.|+|.|+.... ++.+....|+.++..|+++++.. +++++|+++|+..|||+...| + .
T Consensus 81 -id~vihfaa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~s----g~i~~fvhvSTdeVYGds~~~----------~-~ 144 (331)
T KOG0747|consen 81 -IDTVIHFAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVS----GNIRRFVHVSTDEVYGDSDED----------A-V 144 (331)
T ss_pred -hhhhhhhHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhc----cCeeEEEEecccceecCcccc----------c-c
Confidence 8999999987543 45567788999999999999876 589999999999999975431 1 1
Q ss_pred CcCCCCCCCCCCcchhHHH-----HHhh--cCCCceEEEecCCceEecCC
Q 028258 157 FKEDSSRLPFPNFYYELED-----VSAS--YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 157 ~~e~~~~~~~~~~~~~~e~-----~l~~--~~~~~~~~i~Rp~~i~G~~~ 199 (211)
..|.++ +.|...|+..| .+++ +..+++++++|-++||||+-
T Consensus 145 ~~E~s~--~nPtnpyAasKaAaE~~v~Sy~~sy~lpvv~~R~nnVYGP~q 192 (331)
T KOG0747|consen 145 VGEASL--LNPTNPYAASKAAAEMLVRSYGRSYGLPVVTTRMNNVYGPNQ 192 (331)
T ss_pred cccccc--CCCCCchHHHHHHHHHHHHHHhhccCCcEEEEeccCccCCCc
Confidence 125554 23444454433 3334 67899999999999999864
|
|
| >PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases | Back alignment and domain information |
|---|
Probab=99.73 E-value=9.7e-18 Score=137.45 Aligned_cols=148 Identities=16% Similarity=0.103 Sum_probs=98.4
Q ss_pred EEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC-----CC----CCCCcee---EEEeeCCCHHHHHHHHHhc
Q 028258 12 ALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-----WF----PTALVDR---YITFDALDPTDTALKLSLI 79 (211)
Q Consensus 12 ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~-----~~----~~~~~~~---~i~~Dl~d~~~~~~~~~~~ 79 (211)
||||||+|.||+.||++|++ ..-.++++++|++... .+ .+++++. .+.+|++|.+.+..+++..
T Consensus 1 VLVTGa~GSIGseL~rql~~----~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~ 76 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLR----YGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEY 76 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHC----CB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--
T ss_pred CEEEccccHHHHHHHHHHHh----cCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhc
Confidence 79999999999999999995 3335799999986541 01 2334540 3478999999999999866
Q ss_pred ccccceEEeecccCC-----chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCC
Q 028258 80 SQEITNLFWVPLQVQ-----ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYE 154 (211)
Q Consensus 80 ~~~~~~v~~~a~~~~-----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~ 154 (211)
. +|.|||+|+... .++.+.+++|+.||+|+++++..+ ++++|+++|+.+..
T Consensus 77 ~--pdiVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~-----~v~~~v~ISTDKAv----------------- 132 (293)
T PF02719_consen 77 K--PDIVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEH-----GVERFVFISTDKAV----------------- 132 (293)
T ss_dssp T---SEEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHT-----T-SEEEEEEECGCS-----------------
T ss_pred C--CCEEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEccccccC-----------------
Confidence 5 899999999865 367788999999999999999987 78999999985432
Q ss_pred CCCcCCCCCCCCCCcchhHHHHHhh-------c---CCCceEEEecCCceEecC
Q 028258 155 VPFKEDSSRLPFPNFYYELEDVSAS-------Y---SPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 155 ~~~~e~~~~~~~~~~~~~~e~~l~~-------~---~~~~~~~i~Rp~~i~G~~ 198 (211)
.|..-+...|.+.| . ..+..++++|.|+|+|..
T Consensus 133 -----------~PtnvmGatKrlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~ 175 (293)
T PF02719_consen 133 -----------NPTNVMGATKRLAEKLVQAANQYSGNSDTKFSSVRFGNVLGSR 175 (293)
T ss_dssp -----------S--SHHHHHHHHHHHHHHHHCCTSSSS--EEEEEEE-EETTGT
T ss_pred -----------CCCcHHHHHHHHHHHHHHHHhhhCCCCCcEEEEEEecceecCC
Confidence 12333333333333 1 235799999999999965
|
The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A. |
| >PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=9.9e-17 Score=128.85 Aligned_cols=170 Identities=14% Similarity=0.013 Sum_probs=112.6
Q ss_pred ccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC--------CCCCCceeEEEeeCCCHHHHHHH
Q 028258 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW--------FPTALVDRYITFDALDPTDTALK 75 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~--------~~~~~~~~~i~~Dl~d~~~~~~~ 75 (211)
|..++.|++|||||||+||++|+++|+ ++|++|+++.|+..... ....+++ ++.+|++|++++.+.
T Consensus 1 ~~~~~~~~vlItGasg~iG~~l~~~l~-----~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~v~~~ 74 (249)
T PRK12825 1 MGSLMGRVALVTGAARGLGRAIALRLA-----RAGADVVVHYRSDEEAAEELVEAVEALGRRAQ-AVQADVTDKAALEAA 74 (249)
T ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHH-----HCCCeEEEEeCCCHHHHHHHHHHHHhcCCceE-EEECCcCCHHHHHHH
Confidence 344455899999999999999999999 68999988777654210 1235678 999999999998888
Q ss_pred HHhcc---cccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCC
Q 028258 76 LSLIS---QEITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFD 143 (211)
Q Consensus 76 ~~~~~---~~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~ 143 (211)
++++. ..+|.|||+++.... .+...+++|+.++.++++.+...+. ..+..+++++||...+.+.
T Consensus 75 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~~i~~SS~~~~~~~--- 150 (249)
T PRK12825 75 VAAAVERFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMR-KQRGGRIVNISSVAGLPGW--- 150 (249)
T ss_pred HHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-hcCCCEEEEECccccCCCC---
Confidence 76651 128999999985322 2345678899998888888743210 1145788888876544210
Q ss_pred ccccCCCCCCCCCCcCCCCCCCCCCcchhHHHHHhh-----cCCCceEEEecCCceEecCCC
Q 028258 144 PSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGASPR 200 (211)
Q Consensus 144 ~~~~g~~~~~~~~~~e~~~~~~~~~~~~~~e~~l~~-----~~~~~~~~i~Rp~~i~G~~~~ 200 (211)
.... .........+.+... ...+++++++||+.++|+...
T Consensus 151 --------------~~~~---~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~ 195 (249)
T PRK12825 151 --------------PGRS---NYAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKE 195 (249)
T ss_pred --------------CCch---HHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCccc
Confidence 0000 000011112222211 246899999999999998753
|
|
| >PRK12320 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=8.3e-17 Score=146.16 Aligned_cols=136 Identities=17% Similarity=0.146 Sum_probs=102.5
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccceEEeec
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITNLFWVP 90 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~~~a 90 (211)
+|||||||||||++|+++|+ ++||+|++++|.+... ..++++ ++.+|++|+. +.+.+.+ +|.|||++
T Consensus 2 kILVTGAaGFIGs~La~~Ll-----~~G~~Vi~ldr~~~~~--~~~~ve-~v~~Dl~d~~-l~~al~~----~D~VIHLA 68 (699)
T PRK12320 2 QILVTDATGAVGRSVTRQLI-----AAGHTVSGIAQHPHDA--LDPRVD-YVCASLRNPV-LQELAGE----ADAVIHLA 68 (699)
T ss_pred EEEEECCCCHHHHHHHHHHH-----hCCCEEEEEeCChhhc--ccCCce-EEEccCCCHH-HHHHhcC----CCEEEEcC
Confidence 69999999999999999999 6899999999875532 235788 9999999984 5555554 78999999
Q ss_pred ccCCchhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCCCCCCCCCcc
Q 028258 91 LQVQESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFY 170 (211)
Q Consensus 91 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~~~~~~~~~~ 170 (211)
+..... ...+|+.++.|+++++++. ++ +++++||. ||.+ ..|
T Consensus 69 a~~~~~---~~~vNv~Gt~nLleAA~~~-----Gv-RiV~~SS~--~G~~---------------------------~~~ 110 (699)
T PRK12320 69 PVDTSA---PGGVGITGLAHVANAAARA-----GA-RLLFVSQA--AGRP---------------------------ELY 110 (699)
T ss_pred ccCccc---hhhHHHHHHHHHHHHHHHc-----CC-eEEEEECC--CCCC---------------------------ccc
Confidence 764322 2357999999999999886 44 57888764 3211 012
Q ss_pred hhHHHHHhhcCCCceEEEecCCceEecCC
Q 028258 171 YELEDVSASYSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 171 ~~~e~~l~~~~~~~~~~i~Rp~~i~G~~~ 199 (211)
...|.++.. .+++++++|++++||++.
T Consensus 111 ~~aE~ll~~--~~~p~~ILR~~nVYGp~~ 137 (699)
T PRK12320 111 RQAETLVST--GWAPSLVIRIAPPVGRQL 137 (699)
T ss_pred cHHHHHHHh--cCCCEEEEeCceecCCCC
Confidence 234666543 568999999999999854
|
|
| >PLN02503 fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.5e-16 Score=142.79 Aligned_cols=122 Identities=13% Similarity=0.045 Sum_probs=89.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC---------CC-------------------CCCCce
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG---------WF-------------------PTALVD 59 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~---------~~-------------------~~~~~~ 59 (211)
..|+|||||||||+|++|++.|++.. .+--+|+++.|..... .. ...+++
T Consensus 118 ~~k~VlVTGaTGFLGk~LlekLLr~~--~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~ 195 (605)
T PLN02503 118 RGKNFLITGATGFLAKVLIEKILRTN--PDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLV 195 (605)
T ss_pred cCCEEEEcCCchHHHHHHHHHHHHhC--CCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEE
Confidence 36899999999999999999999311 0113689999864320 00 024578
Q ss_pred eEEEeeCCCHH-----HHHHHHHhcccccceEEeecccCCc--hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEee
Q 028258 60 RYITFDALDPT-----DTALKLSLISQEITNLFWVPLQVQE--SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLT 132 (211)
Q Consensus 60 ~~i~~Dl~d~~-----~~~~~~~~~~~~~~~v~~~a~~~~~--~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s 132 (211)
.+.+|+++++ +..+.+.. . +|+|||+|+.... ++...+++|+.++.++++++... .++++|+++|
T Consensus 196 -~v~GDl~d~~LGLs~~~~~~L~~--~-vDiVIH~AA~v~f~~~~~~a~~vNV~GT~nLLelA~~~----~~lk~fV~vS 267 (605)
T PLN02503 196 -PVVGNVCESNLGLEPDLADEIAK--E-VDVIINSAANTTFDERYDVAIDINTRGPCHLMSFAKKC----KKLKLFLQVS 267 (605)
T ss_pred -EEEeeCCCcccCCCHHHHHHHHh--c-CCEEEECccccccccCHHHHHHHHHHHHHHHHHHHHHc----CCCCeEEEcc
Confidence 8999999972 32233322 2 7999999988653 46677899999999999999875 3578899999
Q ss_pred cCeeeec
Q 028258 133 GTKHYMG 139 (211)
Q Consensus 133 ~~~~y~~ 139 (211)
++.+||.
T Consensus 268 TayVyG~ 274 (605)
T PLN02503 268 TAYVNGQ 274 (605)
T ss_pred CceeecC
Confidence 9999975
|
|
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=3.1e-16 Score=128.31 Aligned_cols=160 Identities=16% Similarity=0.183 Sum_probs=111.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhccc---ccc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQ---EIT 84 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~---~~~ 84 (211)
.+++++||||||+||++++++|+ ++|++|++++|++.... ...+++ ++.+|++|++++.++++.+.. .+|
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~-----~~g~~V~~~~r~~~~~~-~~~~~~-~~~~D~~d~~~~~~~~~~~~~~~g~~d 75 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLA-----RAGYRVFGTSRNPARAA-PIPGVE-LLELDVTDDASVQAAVDEVIARAGRID 75 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHH-----HCCCEEEEEeCChhhcc-ccCCCe-eEEeecCCHHHHHHHHHHHHHhCCCCC
Confidence 45789999999999999999999 68999999999865432 235788 999999999998888876521 279
Q ss_pred eEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCC
Q 028258 85 NLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEV 155 (211)
Q Consensus 85 ~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~ 155 (211)
.+||+++.... ++...+++|+.++.++++++...+. ..+..+|+++||...+.. .
T Consensus 76 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~-~~~~~~iv~isS~~~~~~---------------~ 139 (270)
T PRK06179 76 VLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMR-AQGSGRIINISSVLGFLP---------------A 139 (270)
T ss_pred EEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-hcCCceEEEECCccccCC---------------C
Confidence 99999986421 3456788999888888887643211 114578888887543321 0
Q ss_pred CCcCCCCCCCCCCcchh----HHHHHhh-----cCCCceEEEecCCceEecCC
Q 028258 156 PFKEDSSRLPFPNFYYE----LEDVSAS-----YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 156 ~~~e~~~~~~~~~~~~~----~e~~l~~-----~~~~~~~~i~Rp~~i~G~~~ 199 (211)
| ....|.. .+.+... ...+++++++||+.+.++..
T Consensus 140 ~---------~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~ 183 (270)
T PRK06179 140 P---------YMALYAASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFD 183 (270)
T ss_pred C---------CccHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCcccccc
Confidence 0 0111221 2222111 35799999999999987644
|
|
| >PRK06482 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=2.9e-16 Score=128.95 Aligned_cols=119 Identities=13% Similarity=-0.010 Sum_probs=88.1
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC----CCCCCceeEEEeeCCCHHHHHHHHHhcc---c
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW----FPTALVDRYITFDALDPTDTALKLSLIS---Q 81 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~----~~~~~~~~~i~~Dl~d~~~~~~~~~~~~---~ 81 (211)
.|++|||||||+||++++++|+ ++|++|+++.|++.... ....+++ ++.+|++|.+++.+.++.+. .
T Consensus 2 ~k~vlVtGasg~IG~~la~~L~-----~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~ 75 (276)
T PRK06482 2 SKTWFITGASSGFGRGMTERLL-----ARGDRVAATVRRPDALDDLKARYGDRLW-VLQLDVTDSAAVRAVVDRAFAALG 75 (276)
T ss_pred CCEEEEecCCCHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHhccCceE-EEEccCCCHHHHHHHHHHHHHHcC
Confidence 5789999999999999999999 68999999999764311 1124678 89999999998877765421 1
Q ss_pred ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 82 EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 82 ~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
.+|+|||+++.... .+...+++|+.++.++++++...+. ..+..+|+++||.
T Consensus 76 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~-~~~~~~iv~~sS~ 136 (276)
T PRK06482 76 RIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLR-RQGGGRIVQVSSE 136 (276)
T ss_pred CCCEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-hcCCCEEEEEcCc
Confidence 27999999986431 2345678999999999998743210 1135688888774
|
|
| >PRK09135 pteridine reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=3.6e-16 Score=125.90 Aligned_cols=109 Identities=15% Similarity=0.068 Sum_probs=83.3
Q ss_pred ccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC------C---CCCCCceeEEEeeCCCHHHHHH
Q 028258 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG------W---FPTALVDRYITFDALDPTDTAL 74 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~------~---~~~~~~~~~i~~Dl~d~~~~~~ 74 (211)
|.+++.+++|||||+|+||++++++|+ +.|++|++++|+.... . .....+. ++.+|++|.+++..
T Consensus 1 ~~~~~~~~vlItGa~g~iG~~l~~~l~-----~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~ 74 (249)
T PRK09135 1 MMTDSAKVALITGGARRIGAAIARTLH-----AAGYRVAIHYHRSAAEADALAAELNALRPGSAA-ALQADLLDPDALPE 74 (249)
T ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHH-----HCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceE-EEEcCCCCHHHHHH
Confidence 344556899999999999999999999 6899999999874321 0 0123577 88999999998888
Q ss_pred HHHhccc---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhc
Q 028258 75 KLSLISQ---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 75 ~~~~~~~---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
+++.+.. .+|+|||+++... .++...+++|+.++.++++++...
T Consensus 75 ~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~ 130 (249)
T PRK09135 75 LVAACVAAFGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQ 130 (249)
T ss_pred HHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHH
Confidence 8776421 2799999998532 124557789999999999998754
|
|
| >PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Probab=99.71 E-value=2.9e-16 Score=126.63 Aligned_cols=165 Identities=12% Similarity=-0.071 Sum_probs=112.4
Q ss_pred ccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHH
Q 028258 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKL 76 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~ 76 (211)
|.++++|++|||||+|++|++++++|+ ++|++|++++|++.+.. ....+++ ++.+|++|++++.+.+
T Consensus 1 ~~~~~~~~ilItGasg~iG~~l~~~l~-----~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~-~~~~Dl~~~~~~~~~~ 74 (251)
T PRK12826 1 TRDLEGRVALVTGAARGIGRAIAVRLA-----ADGAEVIVVDICGDDAAATAELVEAAGGKAR-ARQVDVRDRAALKAAV 74 (251)
T ss_pred CCCCCCCEEEEcCCCCcHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCeEE-EEECCCCCHHHHHHHH
Confidence 345567899999999999999999999 68999999999854210 1124578 8999999999988887
Q ss_pred Hhccc---ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCc
Q 028258 77 SLISQ---EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDP 144 (211)
Q Consensus 77 ~~~~~---~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~ 144 (211)
+.+.. .+|+|||+++.... ++...++.|+.++.++++++...+. ..+.++|+++||...++.+
T Consensus 75 ~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~ii~~ss~~~~~~~---- 149 (251)
T PRK12826 75 AAGVEDFGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALI-RAGGGRIVLTSSVAGPRVG---- 149 (251)
T ss_pred HHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-HcCCcEEEEEechHhhccC----
Confidence 75521 28999999976432 3345678899999888887753210 0134678888875443111
Q ss_pred cccCCCCCCCCCCcCCCCCCCCCCcchhH-----HHHHhh-----cCCCceEEEecCCceEecCC
Q 028258 145 SLAGQLMPYEVPFKEDSSRLPFPNFYYEL-----EDVSAS-----YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 145 ~~~g~~~~~~~~~~e~~~~~~~~~~~~~~-----e~~l~~-----~~~~~~~~i~Rp~~i~G~~~ 199 (211)
. .....|.. +.++.. ...+++++++||+.++|+..
T Consensus 150 ------------~--------~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~ 194 (251)
T PRK12826 150 ------------Y--------PGLAHYAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMA 194 (251)
T ss_pred ------------C--------CCccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchh
Confidence 0 00111221 222221 24689999999999999864
|
|
| >PRK06180 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=6.5e-16 Score=127.17 Aligned_cols=123 Identities=16% Similarity=0.042 Sum_probs=91.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC----CCCCCceeEEEeeCCCHHHHHHHHHhccc--
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW----FPTALVDRYITFDALDPTDTALKLSLISQ-- 81 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~----~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~-- 81 (211)
++|++|||||+|+||++++++|+ ++|++|++++|++.+.. ....++. ++.+|++|++++.+.++++..
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~-----~~G~~V~~~~r~~~~~~~l~~~~~~~~~-~~~~D~~d~~~~~~~~~~~~~~~ 76 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAAL-----AAGHRVVGTVRSEAARADFEALHPDRAL-ARLLDVTDFDAIDAVVADAEATF 76 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHH-----hCcCEEEEEeCCHHHHHHHHhhcCCCee-EEEccCCCHHHHHHHHHHHHHHh
Confidence 45889999999999999999999 68999999999765321 1124577 889999999988887775421
Q ss_pred -ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeee
Q 028258 82 -EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 137 (211)
Q Consensus 82 -~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y 137 (211)
.+|+|||+++.... .+...+++|+.++.++++++...+. ..+..+|+++||...+
T Consensus 77 ~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~-~~~~~~iv~iSS~~~~ 141 (277)
T PRK06180 77 GPIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMR-ARRRGHIVNITSMGGL 141 (277)
T ss_pred CCCCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHh-ccCCCEEEEEeccccc
Confidence 27999999986421 2345689999999999998654321 1134578888875433
|
|
| >COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.70 E-value=5.1e-16 Score=135.45 Aligned_cols=154 Identities=16% Similarity=0.137 Sum_probs=118.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC---------CCCCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG---------WFPTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~---------~~~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
.+|+||||||+|=||+.+|+++++ ..--+++.++|++.+. .+....+. ++-+|+.|.+.+..++++
T Consensus 249 ~gK~vLVTGagGSiGsel~~qil~----~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~-~~igdVrD~~~~~~~~~~ 323 (588)
T COG1086 249 TGKTVLVTGGGGSIGSELCRQILK----FNPKEIILFSRDEYKLYLIDMELREKFPELKLR-FYIGDVRDRDRVERAMEG 323 (588)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHh----cCCCEEEEecCchHHHHHHHHHHHhhCCCcceE-EEecccccHHHHHHHHhc
Confidence 479999999999999999999995 3334588899987641 11236677 889999999999999999
Q ss_pred cccccceEEeecccCC-----chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCC
Q 028258 79 ISQEITNLFWVPLQVQ-----ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPY 153 (211)
Q Consensus 79 ~~~~~~~v~~~a~~~~-----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~ 153 (211)
.+ ||.|||+|+... .++.+.+++|+.||.|+++++.+. ++++|+.+|+.+.-
T Consensus 324 ~k--vd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~-----~V~~~V~iSTDKAV---------------- 380 (588)
T COG1086 324 HK--VDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKN-----GVKKFVLISTDKAV---------------- 380 (588)
T ss_pred CC--CceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHh-----CCCEEEEEecCccc----------------
Confidence 87 899999999854 278888999999999999999987 89999999874321
Q ss_pred CCCCcCCCCCCCCCCcch----hHHHHHhh--c-CC--CceEEEecCCceEecCCCC
Q 028258 154 EVPFKEDSSRLPFPNFYY----ELEDVSAS--Y-SP--AITYSVHRSSVIIGASPRS 201 (211)
Q Consensus 154 ~~~~~e~~~~~~~~~~~~----~~e~~l~~--~-~~--~~~~~i~Rp~~i~G~~~~~ 201 (211)
.+.+.+. ..|+.+.. + .. +-.++.+|.|+|+|.+ |+
T Consensus 381 -----------~PtNvmGaTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSr-GS 425 (588)
T COG1086 381 -----------NPTNVMGATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSR-GS 425 (588)
T ss_pred -----------CCchHhhHHHHHHHHHHHHHhhccCCCCcEEEEEEecceecCC-CC
Confidence 1122222 23444433 2 22 4799999999999975 44
|
|
| >PRK13394 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=4.7e-16 Score=126.38 Aligned_cols=163 Identities=11% Similarity=-0.030 Sum_probs=107.4
Q ss_pred CCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 6 QNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 6 ~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
.+++|++|||||||+||++++++|+ +.|++|++++|++.... .....+. ++.+|++|.+.+.++++.
T Consensus 4 ~~~~~~vlItGasg~iG~~la~~l~-----~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~ 77 (262)
T PRK13394 4 NLNGKTAVVTGAASGIGKEIALELA-----RAGAAVAIADLNQDGANAVADEINKAGGKAI-GVAMDVTNEDAVNAGIDK 77 (262)
T ss_pred cCCCCEEEEECCCChHHHHHHHHHH-----HCCCeEEEEeCChHHHHHHHHHHHhcCceEE-EEECCCCCHHHHHHHHHH
Confidence 3456899999999999999999999 68999999999874311 0124567 899999999988877765
Q ss_pred cc---cccceEEeecccCCc---------hhHHHHhhcHHH----HHHHHHHH-HhcCCCCCCceEEEEeecCeeeeccc
Q 028258 79 IS---QEITNLFWVPLQVQE---------SEEVNIFKNSTM----LKNVLSVL-VSSNSGRSRLRHVALLTGTKHYMGPI 141 (211)
Q Consensus 79 ~~---~~~~~v~~~a~~~~~---------~~~~~~~~n~~~----~~~l~~~~-~~~~~~~~~~~~~~~~s~~~~y~~~~ 141 (211)
+. ..+|+|||+++.... .+...+++|+.+ +.++++.+ +.. +.++|+++||...+..
T Consensus 78 ~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-----~~~~iv~~ss~~~~~~-- 150 (262)
T PRK13394 78 VAERFGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDD-----RGGVVIYMGSVHSHEA-- 150 (262)
T ss_pred HHHHcCCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhc-----CCcEEEEEcchhhcCC--
Confidence 42 127999999986321 234556789888 55566666 332 4678888887432210
Q ss_pred CCccccCCCCCCCCCCcCCCCCCCCCCcchhHHHHHh---h--cCCCceEEEecCCceEecCC
Q 028258 142 FDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVSA---S--YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 142 ~~~~~~g~~~~~~~~~~e~~~~~~~~~~~~~~e~~l~---~--~~~~~~~~i~Rp~~i~G~~~ 199 (211)
.+.. .. ........+.+.+ . ...+++++++||+.++++..
T Consensus 151 -------------~~~~--~~---y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~ 195 (262)
T PRK13394 151 -------------SPLK--SA---YVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLV 195 (262)
T ss_pred -------------CCCC--cc---cHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhh
Confidence 0000 00 0001111222221 1 24689999999999999853
|
|
| >PRK08264 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.70 E-value=8.9e-16 Score=123.20 Aligned_cols=162 Identities=15% Similarity=0.039 Sum_probs=112.7
Q ss_pred cCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCc-EEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhccccc
Q 028258 5 DQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEI 83 (211)
Q Consensus 5 ~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~-~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~ 83 (211)
++++.++++||||||+||++++++|+ ++|+ +|++++|++.+......+++ ++.+|++|++++.+.++.... +
T Consensus 2 ~~~~~~~vlItGgsg~iG~~la~~l~-----~~G~~~V~~~~r~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~-i 74 (238)
T PRK08264 2 MDIKGKVVLVTGANRGIGRAFVEQLL-----ARGAAKVYAAARDPESVTDLGPRVV-PLQLDVTDPASVAAAAEAASD-V 74 (238)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHH-----HCCcccEEEEecChhhhhhcCCceE-EEEecCCCHHHHHHHHHhcCC-C
Confidence 33456899999999999999999999 6898 89999997664321235788 999999999999988887654 8
Q ss_pred ceEEeeccc-CC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCC
Q 028258 84 TNLFWVPLQ-VQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPY 153 (211)
Q Consensus 84 ~~v~~~a~~-~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~ 153 (211)
|.|||+++. .. ..+...+++|+.++.++++++...+. ..+..+|+++||...|.+.
T Consensus 75 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~~v~~sS~~~~~~~------------- 140 (238)
T PRK08264 75 TILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLA-ANGGGAIVNVLSVLSWVNF------------- 140 (238)
T ss_pred CEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-hcCCCEEEEEcChhhccCC-------------
Confidence 999999986 21 13445678899999888888764310 0134568888775443210
Q ss_pred CCCCcCCCCCCCCCCcc----hhHHHHHhh-----cCCCceEEEecCCceEecC
Q 028258 154 EVPFKEDSSRLPFPNFY----YELEDVSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 154 ~~~~~e~~~~~~~~~~~----~~~e~~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
+....| ...+.+... ...+++++++||+.+.++-
T Consensus 141 -----------~~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~ 183 (238)
T PRK08264 141 -----------PNLGTYSASKAAAWSLTQALRAELAPQGTRVLGVHPGPIDTDM 183 (238)
T ss_pred -----------CCchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeCCcccccc
Confidence 011112 222222221 3468999999999997764
|
|
| >PRK05993 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=4e-16 Score=128.46 Aligned_cols=116 Identities=17% Similarity=0.192 Sum_probs=86.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-CCCCCceeEEEeeCCCHHHHHHHHHhcc----cc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-FPTALVDRYITFDALDPTDTALKLSLIS----QE 82 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-~~~~~~~~~i~~Dl~d~~~~~~~~~~~~----~~ 82 (211)
|+|+++||||||+||++++++|+ ++|++|++++|+++... ....+++ ++.+|++|++++.++++.+. ..
T Consensus 3 ~~k~vlItGasggiG~~la~~l~-----~~G~~Vi~~~r~~~~~~~l~~~~~~-~~~~Dl~d~~~~~~~~~~~~~~~~g~ 76 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQ-----SDGWRVFATCRKEEDVAALEAEGLE-AFQLDYAEPESIAALVAQVLELSGGR 76 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHCCce-EEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 56899999999999999999999 68999999999865421 1224678 89999999998888776641 13
Q ss_pred cceEEeecccCCc---------hhHHHHhhcHHH----HHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 83 ITNLFWVPLQVQE---------SEEVNIFKNSTM----LKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 83 ~~~v~~~a~~~~~---------~~~~~~~~n~~~----~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
+|.+||+|+.... .+...+++|+.+ ++++++.+.+. +..+|+++||.
T Consensus 77 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~-----~~g~iv~isS~ 136 (277)
T PRK05993 77 LDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQ-----GQGRIVQCSSI 136 (277)
T ss_pred ccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhc-----CCCEEEEECCh
Confidence 8999999875321 234567899988 45555555544 35688888874
|
|
| >PRK12429 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=1e-15 Score=124.04 Aligned_cols=166 Identities=13% Similarity=-0.031 Sum_probs=107.7
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
+.+|++|||||||+||++++++|+ ++|++|++++|++.+.. ....+++ ++.+|++|++++.++++.+
T Consensus 2 ~~~~~vlItG~sg~iG~~la~~l~-----~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~ 75 (258)
T PRK12429 2 LKGKVALVTGAASGIGLEIALALA-----KEGAKVVIADLNDEAAAAAAEALQKAGGKAI-GVAMDVTDEEAINAGIDYA 75 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHH-----HCCCeEEEEeCCHHHHHHHHHHHHhcCCcEE-EEEcCCCCHHHHHHHHHHH
Confidence 345899999999999999999999 68999999999865421 0134678 8999999999888877654
Q ss_pred cc---ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCcccc
Q 028258 80 SQ---EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLA 147 (211)
Q Consensus 80 ~~---~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~ 147 (211)
.. .+|.|||+++.... .....+++|+.++.++++.+...+. ..+.++|+++||...+.+.
T Consensus 76 ~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~iv~iss~~~~~~~------- 147 (258)
T PRK12429 76 VETFGGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMK-AQGGGRIINMASVHGLVGS------- 147 (258)
T ss_pred HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHH-hcCCeEEEEEcchhhccCC-------
Confidence 21 28999999975321 2334567888885555554433210 0146789988875433210
Q ss_pred CCCCCCCCCCcCCCCCCCCCCcchhHH---HHHhh--cCCCceEEEecCCceEecCC
Q 028258 148 GQLMPYEVPFKEDSSRLPFPNFYYELE---DVSAS--YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 148 g~~~~~~~~~~e~~~~~~~~~~~~~~e---~~l~~--~~~~~~~~i~Rp~~i~G~~~ 199 (211)
....+ ........+ +.+.. ...++.+.++||+.++++..
T Consensus 148 ----------~~~~~---y~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~ 191 (258)
T PRK12429 148 ----------AGKAA---YVSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLV 191 (258)
T ss_pred ----------CCcch---hHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhh
Confidence 00000 000111111 12211 34689999999999998764
|
|
| >PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.1e-15 Score=124.00 Aligned_cols=166 Identities=15% Similarity=0.031 Sum_probs=110.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC--------CCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW--------FPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~--------~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
|+|+++||||+|+||++++++|+ ++|++|++++|+..... ....++. ++.+|++|++++.++++.+
T Consensus 1 ~~k~vlItG~sg~iG~~la~~L~-----~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~ 74 (256)
T PRK12745 1 MRPVALVTGGRRGIGLGIARALA-----AAGFDLAINDRPDDEELAATQQELRALGVEVI-FFPADVADLSAHEAMLDAA 74 (256)
T ss_pred CCcEEEEeCCCchHHHHHHHHHH-----HCCCEEEEEecCchhHHHHHHHHHHhcCCceE-EEEecCCCHHHHHHHHHHH
Confidence 46899999999999999999999 68999999998754210 0124678 8999999999888877665
Q ss_pred cc---ccceEEeecccCC-----------chhHHHHhhcHHHHHHHHHHHHhcCCC--CC---CceEEEEeecCeeeecc
Q 028258 80 SQ---EITNLFWVPLQVQ-----------ESEEVNIFKNSTMLKNVLSVLVSSNSG--RS---RLRHVALLTGTKHYMGP 140 (211)
Q Consensus 80 ~~---~~~~v~~~a~~~~-----------~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~---~~~~~~~~s~~~~y~~~ 140 (211)
.. .+|.+||+++... ..+.+.+++|+.++.++++++...+.. .. ...+|+++||...+.+.
T Consensus 75 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~ 154 (256)
T PRK12745 75 QAAWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVS 154 (256)
T ss_pred HHhcCCCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCC
Confidence 21 2899999997632 134456789999998988887553210 11 15678888875443210
Q ss_pred cCCccccCCCCCCCCCCcCCCCCCCCCCcchhHHHHHhh-----cCCCceEEEecCCceEecCC
Q 028258 141 IFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 141 ~~~~~~~g~~~~~~~~~~e~~~~~~~~~~~~~~e~~l~~-----~~~~~~~~i~Rp~~i~G~~~ 199 (211)
....+ ....+...+.+... ...+++++++||+.+.++..
T Consensus 155 -----------------~~~~~---Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~ 198 (256)
T PRK12745 155 -----------------PNRGE---YCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMT 198 (256)
T ss_pred -----------------CCCcc---cHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccc
Confidence 00010 00111222222221 24689999999999988643
|
|
| >PRK09186 flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.7e-15 Score=122.80 Aligned_cols=171 Identities=14% Similarity=0.078 Sum_probs=107.6
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC---------CCCCCceeEEEeeCCCHHHHHHHHH
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW---------FPTALVDRYITFDALDPTDTALKLS 77 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~---------~~~~~~~~~i~~Dl~d~~~~~~~~~ 77 (211)
+.+|++|||||||+||+++++.|+ ++|++|+++.|++++.. .....+. ++.+|++|++++.++++
T Consensus 2 ~~~k~vlItGas~giG~~~a~~l~-----~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~-~~~~Dl~d~~~~~~~~~ 75 (256)
T PRK09186 2 LKGKTILITGAGGLIGSALVKAIL-----EAGGIVIAADIDKEALNELLESLGKEFKSKKLS-LVELDITDQESLEEFLS 75 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHH-----HCCCEEEEEecChHHHHHHHHHHHhhcCCCcee-EEEecCCCHHHHHHHHH
Confidence 346899999999999999999999 68999999998765310 1123456 77999999998888877
Q ss_pred hccc---ccceEEeecccCC------------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccC
Q 028258 78 LISQ---EITNLFWVPLQVQ------------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIF 142 (211)
Q Consensus 78 ~~~~---~~~~v~~~a~~~~------------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~ 142 (211)
.+.. .+|++||+|+... ..+...+++|+.++..+++++...+... +..+|+++||...+..+
T Consensus 76 ~~~~~~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~~sS~~~~~~~-- 152 (256)
T PRK09186 76 KSAEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQ-GGGNLVNISSIYGVVAP-- 152 (256)
T ss_pred HHHHHcCCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhc-CCceEEEEechhhhccc--
Confidence 6431 2799999986421 1234556778876666555554332101 34688888875443221
Q ss_pred CccccCCCCCCCCCCcCCCCCCCCCCcchhH----HHHH---hh--cCCCceEEEecCCceEecC
Q 028258 143 DPSLAGQLMPYEVPFKEDSSRLPFPNFYYEL----EDVS---AS--YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 143 ~~~~~g~~~~~~~~~~e~~~~~~~~~~~~~~----e~~l---~~--~~~~~~~~i~Rp~~i~G~~ 198 (211)
..+..++.+. ..+..|... +.+. .. ...++++++++|+.++++.
T Consensus 153 -----------~~~~~~~~~~-~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~ 205 (256)
T PRK09186 153 -----------KFEIYEGTSM-TSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQ 205 (256)
T ss_pred -----------cchhcccccc-CCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCC
Confidence 0111122221 112223321 2221 11 3578999999999987654
|
|
| >PRK07453 protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.68 E-value=2.9e-15 Score=125.97 Aligned_cols=129 Identities=17% Similarity=0.132 Sum_probs=94.1
Q ss_pred ccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHH
Q 028258 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKL 76 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~ 76 (211)
|+.+++|+++||||+|+||++++++|+ ++|++|++++|+..+.. .....++ ++.+|++|.+++.+++
T Consensus 1 m~~~~~k~vlVTGas~gIG~~~a~~L~-----~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~-~~~~Dl~~~~~v~~~~ 74 (322)
T PRK07453 1 MSQDAKGTVIITGASSGVGLYAAKALA-----KRGWHVIMACRNLKKAEAAAQELGIPPDSYT-IIHIDLGDLDSVRRFV 74 (322)
T ss_pred CCCCCCCEEEEEcCCChHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHhhccCCceE-EEEecCCCHHHHHHHH
Confidence 444567899999999999999999999 68999999999754310 1124678 8999999999888777
Q ss_pred Hhcc---cccceEEeecccCC----------chhHHHHhhcHHHHHHHHHHHHhcCCCC-CCceEEEEeecCeeee
Q 028258 77 SLIS---QEITNLFWVPLQVQ----------ESEEVNIFKNSTMLKNVLSVLVSSNSGR-SRLRHVALLTGTKHYM 138 (211)
Q Consensus 77 ~~~~---~~~~~v~~~a~~~~----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~~~~~~s~~~~y~ 138 (211)
+.+. ..+|++||+|+... ..+...+.+|+.++.++++++...+... ....+|+++||...+.
T Consensus 75 ~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~ 150 (322)
T PRK07453 75 DDFRALGKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANP 150 (322)
T ss_pred HHHHHhCCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCc
Confidence 6532 12899999998521 1345567999999888888776543111 1135889988876653
|
|
| >PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.3e-15 Score=122.19 Aligned_cols=168 Identities=14% Similarity=0.056 Sum_probs=111.2
Q ss_pred CCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 6 QNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 6 ~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
+|+++++|||||+|+||++++++|+ ++|++|++++|++.+.. ....++. ++.+|++|++++.+++++
T Consensus 2 ~~~~~~ilItGasg~iG~~l~~~l~-----~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~ 75 (246)
T PRK05653 2 SLQGKTALVTGASRGIGRAIALRLA-----ADGAKVVIYDSNEEAAEALAAELRAAGGEAR-VLVFDVSDEAAVRALIEA 75 (246)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHH-----HCCCEEEEEeCChhHHHHHHHHHHhcCCceE-EEEccCCCHHHHHHHHHH
Confidence 3345889999999999999999999 68999999999865421 0134677 889999999988888776
Q ss_pred ccc---ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccc
Q 028258 79 ISQ---EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSL 146 (211)
Q Consensus 79 ~~~---~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~ 146 (211)
+.. .+|.|+|+++.... .+...++.|+.+..++++++...+. ..+.++|+++||.....
T Consensus 76 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~-~~~~~~ii~~ss~~~~~-------- 146 (246)
T PRK05653 76 AVEAFGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMI-KARYGRIVNISSVSGVT-------- 146 (246)
T ss_pred HHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-hcCCcEEEEECcHHhcc--------
Confidence 421 27999999976432 2345678899998888888854210 11457888887743221
Q ss_pred cCCCCCCCCCCcCCCCCCCCCCcchhHHHHHhh-----cCCCceEEEecCCceEecCCC
Q 028258 147 AGQLMPYEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGASPR 200 (211)
Q Consensus 147 ~g~~~~~~~~~~e~~~~~~~~~~~~~~e~~l~~-----~~~~~~~~i~Rp~~i~G~~~~ 200 (211)
+ . ....+ ........+..... ...+++++++||+.++|+...
T Consensus 147 -~-----~---~~~~~---y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~ 193 (246)
T PRK05653 147 -G-----N---PGQTN---YSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTE 193 (246)
T ss_pred -C-----C---CCCcH---hHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchh
Confidence 0 0 00000 00111111211111 346899999999999998654
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.67 E-value=4.2e-16 Score=142.98 Aligned_cols=152 Identities=15% Similarity=0.036 Sum_probs=103.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccceEE
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITNLF 87 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~ 87 (211)
++++||||||+||||++|+++|. +.|++|. +..+|++|.+.+...+...+ +|+||
T Consensus 379 ~~mkiLVtGa~G~iG~~l~~~L~-----~~g~~v~------------------~~~~~l~d~~~v~~~i~~~~--pd~Vi 433 (668)
T PLN02260 379 PSLKFLIYGRTGWIGGLLGKLCE-----KQGIAYE------------------YGKGRLEDRSSLLADIRNVK--PTHVF 433 (668)
T ss_pred CCceEEEECCCchHHHHHHHHHH-----hCCCeEE------------------eeccccccHHHHHHHHHhhC--CCEEE
Confidence 34579999999999999999999 6788763 22356778888888887765 89999
Q ss_pred eecccCC---c-----hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcC
Q 028258 88 WVPLQVQ---E-----SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKE 159 (211)
Q Consensus 88 ~~a~~~~---~-----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e 159 (211)
|||+... . ++...+++|+.++.+++++|++. ++++ ++.||..+|+.... .... ...|++|
T Consensus 434 h~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~-----g~~~-v~~Ss~~v~~~~~~---~~~~---~~~p~~E 501 (668)
T PLN02260 434 NAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCREN-----GLLM-MNFATGCIFEYDAK---HPEG---SGIGFKE 501 (668)
T ss_pred ECCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHc-----CCeE-EEEcccceecCCcc---cccc---cCCCCCc
Confidence 9998752 1 34567899999999999999987 5555 45566678753100 0000 1246777
Q ss_pred CCCCCCCCCcchhHHHHHhh---cCCCceEEEecCCceEecC
Q 028258 160 DSSRLPFPNFYYELEDVSAS---YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 160 ~~~~~~~~~~~~~~e~~l~~---~~~~~~~~i~Rp~~i~G~~ 198 (211)
+++.. ++...|...|+..+ ... .++.++|+.++||..
T Consensus 502 ~~~~~-~~~~~Yg~sK~~~E~~~~~~-~~~~~~r~~~~~~~~ 541 (668)
T PLN02260 502 EDKPN-FTGSFYSKTKAMVEELLREY-DNVCTLRVRMPISSD 541 (668)
T ss_pred CCCCC-CCCChhhHHHHHHHHHHHhh-hhheEEEEEEecccC
Confidence 76532 23344544444443 112 367888988899765
|
|
| >TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.2e-15 Score=125.98 Aligned_cols=138 Identities=17% Similarity=0.192 Sum_probs=99.0
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcc--cc-cceEE
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLIS--QE-ITNLF 87 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~--~~-~~~v~ 87 (211)
+||||||||++|++++++|+ ++|++|++++|++.+.. ..+++ .+.+|+.|++.+.++++..+ .. +|.++
T Consensus 1 ~ilVtGatG~iG~~vv~~L~-----~~g~~V~~~~R~~~~~~--~~~~~-~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~ 72 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQ-----AASVPFLVASRSSSSSA--GPNEK-HVKFDWLDEDTWDNPFSSDDGMEPEISAVY 72 (285)
T ss_pred CEEEEcCCChHHHHHHHHHH-----hCCCcEEEEeCCCcccc--CCCCc-cccccCCCHHHHHHHHhcccCcCCceeEEE
Confidence 48999999999999999999 68999999999887542 35788 88999999999999985322 12 57788
Q ss_pred eecccCCchhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCCCCCCCC
Q 028258 88 WVPLQVQESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFP 167 (211)
Q Consensus 88 ~~a~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~~~~~~~ 167 (211)
+++..... . .....++++++++. ++++|+++|+...+.. .+
T Consensus 73 ~~~~~~~~-~-------~~~~~~~i~aa~~~-----gv~~~V~~Ss~~~~~~---------------------~~----- 113 (285)
T TIGR03649 73 LVAPPIPD-L-------APPMIKFIDFARSK-----GVRRFVLLSASIIEKG---------------------GP----- 113 (285)
T ss_pred EeCCCCCC-h-------hHHHHHHHHHHHHc-----CCCEEEEeeccccCCC---------------------Cc-----
Confidence 88754321 1 12346789999887 7899999987432210 00
Q ss_pred CcchhHHHHHhhcCCCceEEEecCCceEec
Q 028258 168 NFYYELEDVSASYSPAITYSVHRSSVIIGA 197 (211)
Q Consensus 168 ~~~~~~e~~l~~~~~~~~~~i~Rp~~i~G~ 197 (211)
.....++.+.+ ..+++|+++||+.+++.
T Consensus 114 -~~~~~~~~l~~-~~gi~~tilRp~~f~~~ 141 (285)
T TIGR03649 114 -AMGQVHAHLDS-LGGVEYTVLRPTWFMEN 141 (285)
T ss_pred -hHHHHHHHHHh-ccCCCEEEEeccHHhhh
Confidence 01123445543 24899999999988864
|
This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi. |
| >PRK06914 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=2.8e-15 Score=123.33 Aligned_cols=162 Identities=15% Similarity=0.089 Sum_probs=106.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC---------CCCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW---------FPTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~---------~~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
++|++|||||||++|+++++.|+ ++|++|++++|+++... .....++ ++.+|++|++++.+ ++.
T Consensus 2 ~~k~~lItGasg~iG~~la~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~d~~~~~~-~~~ 74 (280)
T PRK06914 2 NKKIAIVTGASSGFGLLTTLELA-----KKGYLVIATMRNPEKQENLLSQATQLNLQQNIK-VQQLDVTDQNSIHN-FQL 74 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHH-----hCCCEEEEEeCCHHHHHHHHHHHHhcCCCCcee-EEecCCCCHHHHHH-HHH
Confidence 46889999999999999999999 68999999999765310 0124678 89999999988776 544
Q ss_pred c----ccccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCcc
Q 028258 79 I----SQEITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPS 145 (211)
Q Consensus 79 ~----~~~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~ 145 (211)
+ .. +|+|+|+++.... .+.+.+++|+.++.++++++...+. ..+..+|+++||...+.+.
T Consensus 75 ~~~~~~~-id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~iv~vsS~~~~~~~----- 147 (280)
T PRK06914 75 VLKEIGR-IDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMR-KQKSGKIINISSISGRVGF----- 147 (280)
T ss_pred HHHhcCC-eeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-hcCCCEEEEECcccccCCC-----
Confidence 3 22 7999999976431 2344578899998888887643211 1134678888774322110
Q ss_pred ccCCCCCCCCCCcCCCCCCCCCCcchhHHHHHhh-----cCCCceEEEecCCceEecC
Q 028258 146 LAGQLMPYEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 146 ~~g~~~~~~~~~~e~~~~~~~~~~~~~~e~~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
....+ ........+.+... ...+++++++||+.+.++-
T Consensus 148 ------------~~~~~---Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~ 190 (280)
T PRK06914 148 ------------PGLSP---YVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNI 190 (280)
T ss_pred ------------CCCch---hHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccch
Confidence 00000 00111222222222 2468999999999998873
|
|
| >PRK08263 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.9e-15 Score=124.22 Aligned_cols=123 Identities=13% Similarity=-0.041 Sum_probs=89.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC----CCCCCceeEEEeeCCCHHHHHHHHHhcc---
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW----FPTALVDRYITFDALDPTDTALKLSLIS--- 80 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~----~~~~~~~~~i~~Dl~d~~~~~~~~~~~~--- 80 (211)
|+|++|||||+|+||++++++|+ ++|++|++++|++.... .....+. .+.+|++|++++.+.++.+.
T Consensus 2 ~~k~vlItGasg~iG~~~a~~l~-----~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~ 75 (275)
T PRK08263 2 MEKVWFITGASRGFGRAWTEAAL-----ERGDRVVATARDTATLADLAEKYGDRLL-PLALDVTDRAAVFAAVETAVEHF 75 (275)
T ss_pred CCCEEEEeCCCChHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHhccCCee-EEEccCCCHHHHHHHHHHHHHHc
Confidence 45899999999999999999999 68999999999765311 1134577 88999999998877766541
Q ss_pred cccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeee
Q 028258 81 QEITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 137 (211)
Q Consensus 81 ~~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y 137 (211)
..+|++||+++.... ++...+++|+.++.++++++...+. ..+..+++++||...+
T Consensus 76 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~iv~vsS~~~~ 140 (275)
T PRK08263 76 GRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLR-EQRSGHIIQISSIGGI 140 (275)
T ss_pred CCCCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-hcCCCEEEEEcChhhc
Confidence 128999999986432 4556788999998777777642210 0134678888875444
|
|
| >PRK12827 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=3.2e-15 Score=120.42 Aligned_cols=169 Identities=16% Similarity=0.038 Sum_probs=110.4
Q ss_pred ccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----------CCCCCceeEEEeeCCCHHHH
Q 028258 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----------FPTALVDRYITFDALDPTDT 72 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----------~~~~~~~~~i~~Dl~d~~~~ 72 (211)
|..+++++++||||+|+||++++++|+ ++|++|++++|...... .....++ ++.+|++|++++
T Consensus 1 ~~~~~~~~ilItGasg~iG~~la~~l~-----~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~ 74 (249)
T PRK12827 1 MASLDSRRVLITGGSGGLGRAIAVRLA-----ADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKAL-GLAFDVRDFAAT 74 (249)
T ss_pred CCCcCCCEEEEECCCChHHHHHHHHHH-----HCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEE-EEEccCCCHHHH
Confidence 334456889999999999999999999 68999998876432110 0124678 899999999988
Q ss_pred HHHHHhccc---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHH-hcCCCCCCceEEEEeecCeeeec
Q 028258 73 ALKLSLISQ---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLV-SSNSGRSRLRHVALLTGTKHYMG 139 (211)
Q Consensus 73 ~~~~~~~~~---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~-~~~~~~~~~~~~~~~s~~~~y~~ 139 (211)
.+.++.+.. .+|.|||+++... .++...+++|..++.++++++. ..+. .....+++++||...+.+
T Consensus 75 ~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~~~iv~~sS~~~~~~ 153 (249)
T PRK12827 75 RAALDAGVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIR-ARRGGRIVNIASVAGVRG 153 (249)
T ss_pred HHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHh-cCCCeEEEEECCchhcCC
Confidence 777764321 2799999998643 1344567899999999999887 2110 013467888887544421
Q ss_pred ccCCccccCCCCCCCCCCcCCCCCCCCCCcchhHHHHHhh-----cCCCceEEEecCCceEecCC
Q 028258 140 PIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 140 ~~~~~~~~g~~~~~~~~~~e~~~~~~~~~~~~~~e~~l~~-----~~~~~~~~i~Rp~~i~G~~~ 199 (211)
. . ... .....+...+.+... ...+++++++||+.+.++..
T Consensus 154 ~-----------------~-~~~--~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~ 198 (249)
T PRK12827 154 N-----------------R-GQV--NYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMA 198 (249)
T ss_pred C-----------------C-CCc--hhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcc
Confidence 0 0 000 000111111222211 23589999999999998754
|
|
| >PRK06182 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.66 E-value=2e-15 Score=123.87 Aligned_cols=116 Identities=20% Similarity=0.148 Sum_probs=85.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-CCCCCceeEEEeeCCCHHHHHHHHHhcc---ccc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-FPTALVDRYITFDALDPTDTALKLSLIS---QEI 83 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-~~~~~~~~~i~~Dl~d~~~~~~~~~~~~---~~~ 83 (211)
.+|+++||||+|+||++++++|+ ++|++|++++|++++.. ....+++ ++.+|++|++++.+.++.+. ..+
T Consensus 2 ~~k~vlItGasggiG~~la~~l~-----~~G~~V~~~~r~~~~l~~~~~~~~~-~~~~Dv~~~~~~~~~~~~~~~~~~~i 75 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLA-----AQGYTVYGAARRVDKMEDLASLGVH-PLSLDVTDEASIKAAVDTIIAEEGRI 75 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHhCCCe-EEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence 35899999999999999999999 68999999999865321 1124588 99999999998888776541 128
Q ss_pred ceEEeecccCCc---------hhHHHHhhcHHHHHHHH----HHHHhcCCCCCCceEEEEeecC
Q 028258 84 TNLFWVPLQVQE---------SEEVNIFKNSTMLKNVL----SVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 84 ~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~----~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
|++||+++.... ++...+++|+.++..++ +.+++. +..+++++||.
T Consensus 76 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~-----~~g~iv~isS~ 134 (273)
T PRK06182 76 DVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQ-----RSGRIINISSM 134 (273)
T ss_pred CEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhc-----CCCEEEEEcch
Confidence 999999986431 34556788988754444 444443 34678888774
|
|
| >COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.1e-15 Score=122.81 Aligned_cols=159 Identities=17% Similarity=0.139 Sum_probs=106.6
Q ss_pred EEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccceEEeecc
Q 028258 12 ALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITNLFWVPL 91 (211)
Q Consensus 12 ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~~~a~ 91 (211)
|+|||||||||++|+.+|. ..|++|++++|++++.. .++. +..- ..+.+.+.... .+|+|||+|+
T Consensus 1 IliTGgTGlIG~~L~~~L~-----~~gh~v~iltR~~~~~~---~~~~-~~v~---~~~~~~~~~~~---~~DavINLAG 65 (297)
T COG1090 1 ILITGGTGLIGRALTARLR-----KGGHQVTILTRRPPKAS---QNLH-PNVT---LWEGLADALTL---GIDAVINLAG 65 (297)
T ss_pred CeEeccccchhHHHHHHHH-----hCCCeEEEEEcCCcchh---hhcC-cccc---ccchhhhcccC---CCCEEEECCC
Confidence 6899999999999999999 69999999999988642 1222 1111 11122222221 2899999998
Q ss_pred cCCc--hh-----HHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCCCCC
Q 028258 92 QVQE--SE-----EVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRL 164 (211)
Q Consensus 92 ~~~~--~~-----~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~~~~ 164 (211)
.+-. .| +...+.-+..|+.|++++.+. ..+.+.++..|.+..||.. .+..++|++|.
T Consensus 66 ~~I~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~---~~~P~~~isaSAvGyYG~~------------~~~~~tE~~~~- 129 (297)
T COG1090 66 EPIAERRWTEKQKEEIRQSRINTTEKLVELIAAS---ETKPKVLISASAVGYYGHS------------GDRVVTEESPP- 129 (297)
T ss_pred CccccccCCHHHHHHHHHHHhHHHHHHHHHHHhc---cCCCcEEEecceEEEecCC------------CceeeecCCCC-
Confidence 7431 12 234455677889999999866 4566766666667777743 24678888652
Q ss_pred CCCCc----chhHHHHHhh-cCCCceEEEecCCceEecCCCCC
Q 028258 165 PFPNF----YYELEDVSAS-YSPAITYSVHRSSVIIGASPRSL 202 (211)
Q Consensus 165 ~~~~~----~~~~e~~l~~-~~~~~~~~i~Rp~~i~G~~~~~~ 202 (211)
...| .++.|+.... ...+..++++|.++|+|+..|.+
T Consensus 130 -g~~Fla~lc~~WE~~a~~a~~~gtRvvllRtGvVLs~~GGaL 171 (297)
T COG1090 130 -GDDFLAQLCQDWEEEALQAQQLGTRVVLLRTGVVLSPDGGAL 171 (297)
T ss_pred -CCChHHHHHHHHHHHHhhhhhcCceEEEEEEEEEecCCCcch
Confidence 2222 3445555444 56789999999999999875543
|
|
| >PRK07806 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.3e-15 Score=122.94 Aligned_cols=122 Identities=17% Similarity=0.129 Sum_probs=90.8
Q ss_pred ccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC--------CCCCCceeEEEeeCCCHHHHHHH
Q 028258 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW--------FPTALVDRYITFDALDPTDTALK 75 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~--------~~~~~~~~~i~~Dl~d~~~~~~~ 75 (211)
|.++++|++|||||||+||++++++|+ ++|++|++++|+..... ....++. ++.+|++|++++.+.
T Consensus 1 ~~~~~~k~vlItGasggiG~~l~~~l~-----~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~-~~~~D~~~~~~~~~~ 74 (248)
T PRK07806 1 MGDLPGKTALVTGSSRGIGADTAKILA-----GAGAHVVVNYRQKAPRANKVVAEIEAAGGRAS-AVGADLTDEESVAAL 74 (248)
T ss_pred CCCCCCcEEEEECCCCcHHHHHHHHHH-----HCCCEEEEEeCCchHhHHHHHHHHHhcCCceE-EEEcCCCCHHHHHHH
Confidence 344567899999999999999999999 68999999998754210 0123567 889999999988877
Q ss_pred HHhccc---ccceEEeecccCCc---hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 76 LSLISQ---EITNLFWVPLQVQE---SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 76 ~~~~~~---~~~~v~~~a~~~~~---~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
++.+.. .+|++||+++.... ++...+++|+.++.++++++...+ ..-.+++++||.
T Consensus 75 ~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~---~~~~~iv~isS~ 136 (248)
T PRK07806 75 MDTAREEFGGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLM---PAGSRVVFVTSH 136 (248)
T ss_pred HHHHHHhCCCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhc---cCCceEEEEeCc
Confidence 765321 27999999875322 345567899999999999998752 122477888774
|
|
| >PRK06196 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=2.3e-15 Score=126.26 Aligned_cols=171 Identities=15% Similarity=0.026 Sum_probs=109.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCC---CCCCceeEEEeeCCCHHHHHHHHHhcc---c
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF---PTALVDRYITFDALDPTDTALKLSLIS---Q 81 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~---~~~~~~~~i~~Dl~d~~~~~~~~~~~~---~ 81 (211)
++|+++||||||+||++++++|+ +.|++|++++|++.+... ....++ ++.+|++|.+++.++++.+. .
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~-----~~G~~Vv~~~R~~~~~~~~~~~l~~v~-~~~~Dl~d~~~v~~~~~~~~~~~~ 98 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALA-----QAGAHVIVPARRPDVAREALAGIDGVE-VVMLDLADLESVRAFAERFLDSGR 98 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHhhhCe-EEEccCCCHHHHHHHHHHHHhcCC
Confidence 46899999999999999999999 689999999998653210 113478 99999999998887776542 1
Q ss_pred ccceEEeecccCC-------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCC
Q 028258 82 EITNLFWVPLQVQ-------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYE 154 (211)
Q Consensus 82 ~~~~v~~~a~~~~-------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~ 154 (211)
.+|++||+|+... ..+...+.+|+.++..+++.+...+... +..+|+++||...+..+.. .
T Consensus 99 ~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~-~~~~iV~vSS~~~~~~~~~-----------~ 166 (315)
T PRK06196 99 RIDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAG-AGARVVALSSAGHRRSPIR-----------W 166 (315)
T ss_pred CCCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCeEEEECCHHhccCCCC-----------c
Confidence 3899999998632 2345678899988666666554321101 2357888887543321110 0
Q ss_pred CCCcCCCCCCCCCCcchhHHHH--------Hhh--cCCCceEEEecCCceEecC
Q 028258 155 VPFKEDSSRLPFPNFYYELEDV--------SAS--YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 155 ~~~~e~~~~~~~~~~~~~~e~~--------l~~--~~~~~~~~i~Rp~~i~G~~ 198 (211)
.......+. .+...|...|. +.. ...++.++++||+.+.++-
T Consensus 167 ~~~~~~~~~--~~~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~ 218 (315)
T PRK06196 167 DDPHFTRGY--DKWLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPL 218 (315)
T ss_pred cccCccCCC--ChHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCc
Confidence 000001111 11222332222 111 3468999999999998874
|
|
| >PRK06523 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=5.4e-15 Score=120.26 Aligned_cols=163 Identities=16% Similarity=0.067 Sum_probs=109.1
Q ss_pred ccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhccc--
Q 028258 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQ-- 81 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~-- 81 (211)
...+.+|++|||||||+||++++++|. +.|++|++++|++... ....+. ++.+|++|++++.+.++.+..
T Consensus 4 ~~~~~~k~vlItGas~gIG~~ia~~l~-----~~G~~v~~~~r~~~~~--~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~ 75 (260)
T PRK06523 4 FLELAGKRALVTGGTKGIGAATVARLL-----EAGARVVTTARSRPDD--LPEGVE-FVAADLTTAEGCAAVARAVLERL 75 (260)
T ss_pred CcCCCCCEEEEECCCCchhHHHHHHHH-----HCCCEEEEEeCChhhh--cCCcee-EEecCCCCHHHHHHHHHHHHHHc
Confidence 334557899999999999999999999 6899999999976543 234678 899999999887766654321
Q ss_pred -ccceEEeecccCC-----------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCC
Q 028258 82 -EITNLFWVPLQVQ-----------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQ 149 (211)
Q Consensus 82 -~~~~v~~~a~~~~-----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~ 149 (211)
.+|++||+++... .++...+++|+.++.++.+++...+... +..+++++||...+..
T Consensus 76 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~ii~isS~~~~~~---------- 144 (260)
T PRK06523 76 GGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIAR-GSGVIIHVTSIQRRLP---------- 144 (260)
T ss_pred CCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc-CCcEEEEEecccccCC----------
Confidence 2899999998421 1355677899998877766654432101 2356888877543321
Q ss_pred CCCCCCCCcCCCCCCCCCCcchh----HHHHHhh-----cCCCceEEEecCCceEecC
Q 028258 150 LMPYEVPFKEDSSRLPFPNFYYE----LEDVSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 150 ~~~~~~~~~e~~~~~~~~~~~~~----~e~~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
..+ ....|.. .+.+.+. ...++.+.+++|+.+..+.
T Consensus 145 -------~~~------~~~~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~ 189 (260)
T PRK06523 145 -------LPE------STTAYAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEA 189 (260)
T ss_pred -------CCC------CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCcc
Confidence 000 0111221 2222222 2468999999999998864
|
|
| >PRK07067 sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=3e-15 Score=121.64 Aligned_cols=166 Identities=13% Similarity=0.020 Sum_probs=109.9
Q ss_pred CCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC----CCCCCceeEEEeeCCCHHHHHHHHHhccc
Q 028258 6 QNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW----FPTALVDRYITFDALDPTDTALKLSLISQ 81 (211)
Q Consensus 6 ~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~----~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~ 81 (211)
..+.|++|||||+|+||++++++|+ ++|++|++++|+..... .....+. ++.+|++|++++.++++.+..
T Consensus 3 ~l~~~~vlItGas~~iG~~ia~~l~-----~~G~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~ 76 (257)
T PRK07067 3 RLQGKVALLTGAASGIGEAVAERYL-----AEGARVVIADIKPARARLAALEIGPAAI-AVSLDVTRQDSIDRIVAAAVE 76 (257)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHH-----HcCCEEEEEcCCHHHHHHHHHHhCCceE-EEEccCCCHHHHHHHHHHHHH
Confidence 3456899999999999999999999 68999999999765311 1124577 899999999988887775421
Q ss_pred ---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCee-eecccCCccccC
Q 028258 82 ---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKH-YMGPIFDPSLAG 148 (211)
Q Consensus 82 ---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~-y~~~~~~~~~~g 148 (211)
.+|.+||+++... .++...+++|+.++.++++++...+.....-.+|+++||... ++.
T Consensus 77 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~--------- 147 (257)
T PRK07067 77 RFGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGE--------- 147 (257)
T ss_pred HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCC---------
Confidence 3899999987532 134556789999999999988654200011146777776321 110
Q ss_pred CCCCCCCCCcCCCCCCCCCCcchhHHHHHhh-----cCCCceEEEecCCceEecC
Q 028258 149 QLMPYEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 149 ~~~~~~~~~~e~~~~~~~~~~~~~~e~~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
. ... .........+.+.+. ...+++++.+||+.++++.
T Consensus 148 ---------~-~~~--~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~ 190 (257)
T PRK07067 148 ---------A-LVS--HYCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPM 190 (257)
T ss_pred ---------C-CCc--hhhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchh
Confidence 0 000 000111222222211 3578999999999999974
|
|
| >PRK07060 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=2.2e-15 Score=121.20 Aligned_cols=169 Identities=12% Similarity=0.031 Sum_probs=112.1
Q ss_pred ccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-C-CCCCceeEEEeeCCCHHHHHHHHHhccc
Q 028258 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-F-PTALVDRYITFDALDPTDTALKLSLISQ 81 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-~-~~~~~~~~i~~Dl~d~~~~~~~~~~~~~ 81 (211)
|.++.+++++||||+|+||+++++.|+ ++|++|++++|++++.. . ...+.+ ++.+|++|.+.+.+.++....
T Consensus 4 ~~~~~~~~~lItGa~g~iG~~~a~~l~-----~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~D~~~~~~v~~~~~~~~~ 77 (245)
T PRK07060 4 AFDFSGKSVLVTGASSGIGRACAVALA-----QRGARVVAAARNAAALDRLAGETGCE-PLRLDVGDDAAIRAALAAAGA 77 (245)
T ss_pred ccccCCCEEEEeCCcchHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHhCCe-EEEecCCCHHHHHHHHHHhCC
Confidence 334456899999999999999999999 68999999999764321 0 112467 889999999988888876544
Q ss_pred ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCC
Q 028258 82 EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMP 152 (211)
Q Consensus 82 ~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~ 152 (211)
+|+|||+++.... ++.+.+.+|+.++.++++++.+.+.......+|+++||...|...
T Consensus 78 -~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------ 144 (245)
T PRK07060 78 -FDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGL------------ 144 (245)
T ss_pred -CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCC------------
Confidence 8999999976321 344556789999999988886542101112578888875443210
Q ss_pred CCCCCcCCCCCCCCCCcchhHHHHHhh-----cCCCceEEEecCCceEecCC
Q 028258 153 YEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 153 ~~~~~~e~~~~~~~~~~~~~~e~~l~~-----~~~~~~~~i~Rp~~i~G~~~ 199 (211)
.... .........+.+.+. ...+++++.+||+.++++..
T Consensus 145 -----~~~~---~y~~sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~ 188 (245)
T PRK07060 145 -----PDHL---AYCASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMA 188 (245)
T ss_pred -----CCCc---HhHHHHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchh
Confidence 0000 000111222222222 23589999999999998753
|
|
| >PRK12828 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=6.3e-15 Score=117.87 Aligned_cols=164 Identities=13% Similarity=0.048 Sum_probs=109.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC-----CCCCCCceeEEEeeCCCHHHHHHHHHhccc-
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-----WFPTALVDRYITFDALDPTDTALKLSLISQ- 81 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~-----~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~- 81 (211)
.+|++|||||||+||++++++|+ ++|++|++++|++.+. ......++ ++.+|++|.+++.+.++.+..
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~-----~~G~~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~ 79 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLA-----ARGARVALIGRGAAPLSQTLPGVPADALR-IGGIDLVDPQAARRAVDEVNRQ 79 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHH-----HCCCeEEEEeCChHhHHHHHHHHhhcCce-EEEeecCCHHHHHHHHHHHHHH
Confidence 46899999999999999999999 6899999999976531 11234567 889999999988877765421
Q ss_pred --ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCC
Q 028258 82 --EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQL 150 (211)
Q Consensus 82 --~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~ 150 (211)
.+|.|+|+++.... .+.+.+.+|..++.++++++.+.+. ..+.++|+++||...|+..
T Consensus 80 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~~~iv~~sS~~~~~~~---------- 148 (239)
T PRK12828 80 FGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALT-ASGGGRIVNIGAGAALKAG---------- 148 (239)
T ss_pred hCCcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHH-hcCCCEEEEECchHhccCC----------
Confidence 27999999875321 2344577899998888887754211 1146788988886555311
Q ss_pred CCCCCCCcCCCCCCCCCCcchhHHHHHhh-----cCCCceEEEecCCceEecC
Q 028258 151 MPYEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 151 ~~~~~~~~e~~~~~~~~~~~~~~e~~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
.... .........+.++.. ...++++.++||+.++++.
T Consensus 149 --------~~~~--~y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~ 191 (239)
T PRK12828 149 --------PGMG--AYAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPP 191 (239)
T ss_pred --------CCcc--hhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcc
Confidence 0000 000011111222221 2468999999999999874
|
|
| >PRK12746 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=5.5e-15 Score=119.71 Aligned_cols=163 Identities=12% Similarity=-0.051 Sum_probs=107.5
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEE-eCCCCCCC-----C--CCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGA-ARRPPPGW-----F--PTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~-~R~~~~~~-----~--~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
+++++++||||||+||++++++|+ ++|++|+++ .|+..+.. . ....++ ++.+|++|++++.++++.
T Consensus 4 ~~~~~ilItGasg~iG~~la~~l~-----~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~-~~~~D~~d~~~i~~~~~~ 77 (254)
T PRK12746 4 LDGKVALVTGASRGIGRAIAMRLA-----NDGALVAIHYGRNKQAADETIREIESNGGKAF-LIEADLNSIDGVKKLVEQ 77 (254)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHH-----HCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEE-EEEcCcCCHHHHHHHHHH
Confidence 445899999999999999999999 689998775 45543210 0 124577 889999999998887775
Q ss_pred cc---------cccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecc
Q 028258 79 IS---------QEITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGP 140 (211)
Q Consensus 79 ~~---------~~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~ 140 (211)
+. ..+|++||+++.... .+...+++|+.++.++++++.+.+ ....+++++||...+...
T Consensus 78 ~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~~v~~sS~~~~~~~ 154 (254)
T PRK12746 78 LKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLL---RAEGRVINISSAEVRLGF 154 (254)
T ss_pred HHHHhccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHh---hcCCEEEEECCHHhcCCC
Confidence 42 128999999986322 124456799999999999887642 122477888775544210
Q ss_pred cCCccccCCCCCCCCCCcCCCCCCCCCCcchhHHHHHhh-----cCCCceEEEecCCceEecC
Q 028258 141 IFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 141 ~~~~~~~g~~~~~~~~~~e~~~~~~~~~~~~~~e~~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
....+ ......+.+.+... ...++++++++|+.+.++-
T Consensus 155 -----------------~~~~~---Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~ 197 (254)
T PRK12746 155 -----------------TGSIA---YGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDI 197 (254)
T ss_pred -----------------CCCcc---hHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcc
Confidence 00000 01111222222221 2468999999999998764
|
|
| >COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.64 E-value=9.2e-15 Score=116.02 Aligned_cols=125 Identities=21% Similarity=0.098 Sum_probs=94.6
Q ss_pred ccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----CCCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----FPTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
|.....|.++|||||++||.+++++|. +.|++|++..|+.++.. .....+. .+..|++|++++..+++.
T Consensus 1 m~~~~~kv~lITGASSGiG~A~A~~l~-----~~G~~vvl~aRR~drL~~la~~~~~~~~~-~~~~DVtD~~~~~~~i~~ 74 (246)
T COG4221 1 MTTLKGKVALITGASSGIGEATARALA-----EAGAKVVLAARREERLEALADEIGAGAAL-ALALDVTDRAAVEAAIEA 74 (246)
T ss_pred CCCCCCcEEEEecCcchHHHHHHHHHH-----HCCCeEEEEeccHHHHHHHHHhhccCceE-EEeeccCCHHHHHHHHHH
Confidence 344456899999999999999999999 79999999999987521 1124577 889999999987776654
Q ss_pred ccc---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 79 ISQ---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 79 ~~~---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
+.+ .+|.+||.||... .+|..++++|+.|+.+..+++...|... +-.+++.+||..
T Consensus 75 ~~~~~g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r-~~G~IiN~~SiA 142 (246)
T COG4221 75 LPEEFGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVER-KSGHIINLGSIA 142 (246)
T ss_pred HHHhhCcccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhc-CCceEEEecccc
Confidence 432 3999999998743 2678889999999888888776654111 223777777743
|
|
| >PRK06500 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=5e-15 Score=119.46 Aligned_cols=165 Identities=15% Similarity=0.037 Sum_probs=107.7
Q ss_pred ccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC----CCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW----FPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~----~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
|+.+++|+++||||+|+||++++++|+ ++|++|++++|+..... .....+. ++.+|++|.+++...++.+
T Consensus 1 m~~~~~k~vlItGasg~iG~~la~~l~-----~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~ 74 (249)
T PRK06500 1 MSRLQGKTALITGGTSGIGLETARQFL-----AEGARVAITGRDPASLEAARAELGESAL-VIRADAGDVAAQKALAQAL 74 (249)
T ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHH-----HCCCEEEEecCCHHHHHHHHHHhCCceE-EEEecCCCHHHHHHHHHHH
Confidence 344567899999999999999999999 68999999998754211 0124577 8899999998776665543
Q ss_pred c---cccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeec-CeeeecccCCccc
Q 028258 80 S---QEITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTG-TKHYMGPIFDPSL 146 (211)
Q Consensus 80 ~---~~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~-~~~y~~~~~~~~~ 146 (211)
. ..+|++||+++... ..+...+++|+.++.++++++...+. ...++++.+| ...|+.+
T Consensus 75 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~~~~i~~~S~~~~~~~~------ 145 (249)
T PRK06500 75 AEAFGRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLA---NPASIVLNGSINAHIGMP------ 145 (249)
T ss_pred HHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHh---cCCEEEEEechHhccCCC------
Confidence 2 13899999997632 13445789999999999999976421 1134555544 3333211
Q ss_pred cCCCCCCCCCCcCCCCCCCCCCcchhHHHHHhh-----cCCCceEEEecCCceEecC
Q 028258 147 AGQLMPYEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 147 ~g~~~~~~~~~~e~~~~~~~~~~~~~~e~~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
...+ ....+...+.+... ...++++.++||+.++++.
T Consensus 146 ------------~~~~---Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~ 187 (249)
T PRK06500 146 ------------NSSV---YAASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPL 187 (249)
T ss_pred ------------CccH---HHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHH
Confidence 0000 00011122222221 3468999999999999873
|
|
| >PRK05876 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=5e-15 Score=122.00 Aligned_cols=128 Identities=13% Similarity=-0.023 Sum_probs=91.7
Q ss_pred ccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----C--CCCCceeEEEeeCCCHHHHHHHH
Q 028258 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----F--PTALVDRYITFDALDPTDTALKL 76 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----~--~~~~~~~~i~~Dl~d~~~~~~~~ 76 (211)
|..+++|++|||||+|+||++++++|+ +.|++|++++|+.+... . ....+. ++.+|++|++++.+.+
T Consensus 1 ~~~~~~k~vlVTGas~gIG~ala~~La-----~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~-~~~~Dv~d~~~v~~~~ 74 (275)
T PRK05876 1 MDGFPGRGAVITGGASGIGLATGTEFA-----RRGARVVLGDVDKPGLRQAVNHLRAEGFDVH-GVMCDVRHREEVTHLA 74 (275)
T ss_pred CCCcCCCEEEEeCCCchHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCeEE-EEeCCCCCHHHHHHHH
Confidence 334557899999999999999999999 68999999998764311 0 123467 8899999999888777
Q ss_pred Hhccc---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeee
Q 028258 77 SLISQ---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 137 (211)
Q Consensus 77 ~~~~~---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y 137 (211)
+.+.. .+|++||+|+... .++...+++|+.++.++++++...+.....-.+++++||...+
T Consensus 75 ~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~ 147 (275)
T PRK05876 75 DEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGL 147 (275)
T ss_pred HHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhc
Confidence 65421 2899999998632 1345567999999988888875432001113578888875443
|
|
| >PRK12829 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=4.1e-15 Score=120.94 Aligned_cols=167 Identities=14% Similarity=0.053 Sum_probs=108.0
Q ss_pred CCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----CCCCCceeEEEeeCCCHHHHHHHHHhcc
Q 028258 6 QNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----FPTALVDRYITFDALDPTDTALKLSLIS 80 (211)
Q Consensus 6 ~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~~~~ 80 (211)
.++.+++|||||+|+||++++++|+ ++|++|++++|++.... ....++. ++.+|++|++++.++++.+.
T Consensus 8 ~~~~~~vlItGa~g~iG~~~a~~L~-----~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~ 81 (264)
T PRK12829 8 PLDGLRVLVTGGASGIGRAIAEAFA-----EAGARVHVCDVSEAALAATAARLPGAKVT-ATVADVADPAQVERVFDTAV 81 (264)
T ss_pred ccCCCEEEEeCCCCcHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHhcCceE-EEEccCCCHHHHHHHHHHHH
Confidence 3456899999999999999999999 68999999999754311 1112457 89999999998887776542
Q ss_pred c---ccceEEeecccC-C---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCc-eEEEEeecCeeeecccCCccc
Q 028258 81 Q---EITNLFWVPLQV-Q---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRL-RHVALLTGTKHYMGPIFDPSL 146 (211)
Q Consensus 81 ~---~~~~v~~~a~~~-~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~-~~~~~~s~~~~y~~~~~~~~~ 146 (211)
. .+|.|||+++.. . ..+...+++|..++.++++++...+... +. .+|+++|+...+.
T Consensus 82 ~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~~vv~~ss~~~~~-------- 152 (264)
T PRK12829 82 ERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKAS-GHGGVIIALSSVAGRL-------- 152 (264)
T ss_pred HHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCCeEEEEeccccccc--------
Confidence 1 289999999864 1 1345678899999988888774321001 22 5566666532211
Q ss_pred cCCCCCCCCCCcCCCCCCCCCCcchhHHHHHhh-----cCCCceEEEecCCceEecCC
Q 028258 147 AGQLMPYEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 147 ~g~~~~~~~~~~e~~~~~~~~~~~~~~e~~l~~-----~~~~~~~~i~Rp~~i~G~~~ 199 (211)
+ .....+ ........+.++.. ...+++++++||+.++|+..
T Consensus 153 -~--------~~~~~~---y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~ 198 (264)
T PRK12829 153 -G--------YPGRTP---YAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRM 198 (264)
T ss_pred -C--------CCCCch---hHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHH
Confidence 0 000000 00011112222222 24689999999999998764
|
|
| >PRK06398 aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.9e-14 Score=117.27 Aligned_cols=123 Identities=13% Similarity=0.051 Sum_probs=92.4
Q ss_pred ccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhccc--
Q 028258 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQ-- 81 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~-- 81 (211)
|..+++|++|||||+|+||++++++|+ +.|++|++++|+.... ..++ ++.+|++|++++.++++.+..
T Consensus 1 ~~~l~gk~vlItGas~gIG~~ia~~l~-----~~G~~Vi~~~r~~~~~----~~~~-~~~~D~~~~~~i~~~~~~~~~~~ 70 (258)
T PRK06398 1 DLGLKDKVAIVTGGSQGIGKAVVNRLK-----EEGSNVINFDIKEPSY----NDVD-YFKVDVSNKEQVIKGIDYVISKY 70 (258)
T ss_pred CCCCCCCEEEEECCCchHHHHHHHHHH-----HCCCeEEEEeCCcccc----CceE-EEEccCCCHHHHHHHHHHHHHHc
Confidence 334556899999999999999999999 6999999999976532 3678 899999999988877765421
Q ss_pred -ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeee
Q 028258 82 -EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 137 (211)
Q Consensus 82 -~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y 137 (211)
.+|++||+++... .++...+++|+.++.++++++...+... +..+++++||...+
T Consensus 71 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~isS~~~~ 135 (258)
T PRK06398 71 GRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQ-DKGVIINIASVQSF 135 (258)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCeEEEEeCcchhc
Confidence 3899999998632 1345667999999888888776432101 24678888875443
|
|
| >PRK06101 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=6.2e-15 Score=118.81 Aligned_cols=116 Identities=18% Similarity=0.101 Sum_probs=87.9
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC---CCCCCceeEEEeeCCCHHHHHHHHHhcccccceE
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW---FPTALVDRYITFDALDPTDTALKLSLISQEITNL 86 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~---~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v 86 (211)
++++||||||+||++++++|+ ++|++|++++|++.... ....++. ++.+|++|++++.++++.+...+|.+
T Consensus 2 ~~vlItGas~giG~~la~~L~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~d~~ 75 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYA-----KQGWQVIACGRNQSVLDELHTQSANIF-TLAFDVTDHPGTKAALSQLPFIPELW 75 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHH-----hCCCEEEEEECCHHHHHHHHHhcCCCe-EEEeeCCCHHHHHHHHHhcccCCCEE
Confidence 789999999999999999999 68999999999765321 1124678 89999999999999988765336778
Q ss_pred EeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 87 FWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 87 ~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
+|+++... ..+.+.+++|+.++.++++++...+. +-.+++++||.
T Consensus 76 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~~~iv~isS~ 129 (240)
T PRK06101 76 IFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLS---CGHRVVIVGSI 129 (240)
T ss_pred EEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhh---cCCeEEEEech
Confidence 88876421 12445789999999999998876421 12456766663
|
|
| >PRK07523 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=4.9e-15 Score=120.24 Aligned_cols=164 Identities=13% Similarity=0.056 Sum_probs=109.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----C--CCCCceeEEEeeCCCHHHHHHHHHhcc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----F--PTALVDRYITFDALDPTDTALKLSLIS 80 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----~--~~~~~~~~i~~Dl~d~~~~~~~~~~~~ 80 (211)
.+|++|||||+|+||++++++|+ ++|++|++++|++.+.. . ....+. ++.+|++|++++.++++.+.
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~-~~~~D~~~~~~~~~~~~~~~ 82 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLA-----QAGAEVILNGRDPAKLAAAAESLKGQGLSAH-ALAFDVTDHDAVRAAIDAFE 82 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHH-----HcCCEEEEEeCCHHHHHHHHHHHHhcCceEE-EEEccCCCHHHHHHHHHHHH
Confidence 36899999999999999999999 68999999999765311 0 123477 88999999998888876643
Q ss_pred c---ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccC
Q 028258 81 Q---EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAG 148 (211)
Q Consensus 81 ~---~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g 148 (211)
. .+|++||+++.... .+...+.+|+.++.++++++.+.+... ...+++++||...+.
T Consensus 83 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~iss~~~~~---------- 151 (255)
T PRK07523 83 AEIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIAR-GAGKIINIASVQSAL---------- 151 (255)
T ss_pred HhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHh-CCeEEEEEccchhcc----------
Confidence 1 38999999986431 234567899999999998887542101 246788887743221
Q ss_pred CCCCCCCCCcCCCCCCCCCCcchhHHHHHhh-----cCCCceEEEecCCceEecC
Q 028258 149 QLMPYEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 149 ~~~~~~~~~~e~~~~~~~~~~~~~~e~~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
+... .. .....+...+.+.+. ...++++.++||+.+.++.
T Consensus 152 -------~~~~-~~--~y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~ 196 (255)
T PRK07523 152 -------ARPG-IA--PYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPL 196 (255)
T ss_pred -------CCCC-Cc--cHHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCch
Confidence 0000 00 000011112222221 3568999999999998875
|
|
| >PRK07774 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=7.6e-15 Score=118.53 Aligned_cols=164 Identities=13% Similarity=-0.001 Sum_probs=110.0
Q ss_pred cCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHH
Q 028258 5 DQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLS 77 (211)
Q Consensus 5 ~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~ 77 (211)
...+.|+++||||+|+||++++++|+ +.|++|++++|++.... .....+. ++.+|++|.+++...++
T Consensus 2 ~~~~~k~vlItGasg~iG~~la~~l~-----~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~ 75 (250)
T PRK07774 2 GRFDDKVAIVTGAAGGIGQAYAEALA-----REGASVVVADINAEGAERVAKQIVADGGTAI-AVQVDVSDPDSAKAMAD 75 (250)
T ss_pred cccCCCEEEEECCCchHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEE-EEEcCCCCHHHHHHHHH
Confidence 33456899999999999999999999 68999999999754310 0123567 88999999988877666
Q ss_pred hc----ccccceEEeecccCC------------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeeccc
Q 028258 78 LI----SQEITNLFWVPLQVQ------------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPI 141 (211)
Q Consensus 78 ~~----~~~~~~v~~~a~~~~------------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~ 141 (211)
.+ .. +|.|||+++... ..+.+.+++|+.++.++++++...+. ..+.++|++.||...|...
T Consensus 76 ~~~~~~~~-id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~iv~~sS~~~~~~~- 152 (250)
T PRK07774 76 ATVSAFGG-IDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMA-KRGGGAIVNQSSTAAWLYS- 152 (250)
T ss_pred HHHHHhCC-CCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHH-HhCCcEEEEEecccccCCc-
Confidence 44 22 899999998631 12345678999999998888875420 0123578888876544210
Q ss_pred CCccccCCCCCCCCCCcCCCCCCCCCCcchhHHHHHhh-----cCCCceEEEecCCceEecCC
Q 028258 142 FDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 142 ~~~~~~g~~~~~~~~~~e~~~~~~~~~~~~~~e~~l~~-----~~~~~~~~i~Rp~~i~G~~~ 199 (211)
. .......+.+.+.+. ...++.+++++|+.+..+..
T Consensus 153 -------------------~---~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~ 193 (250)
T PRK07774 153 -------------------N---FYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEAT 193 (250)
T ss_pred -------------------c---ccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCccc
Confidence 0 000111222222222 24689999999998877654
|
|
| >COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.63 E-value=7.2e-15 Score=119.22 Aligned_cols=163 Identities=17% Similarity=0.106 Sum_probs=111.1
Q ss_pred ccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----C---CCCCceeEEEeeCCCHHHHHHH
Q 028258 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----F---PTALVDRYITFDALDPTDTALK 75 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----~---~~~~~~~~i~~Dl~d~~~~~~~ 75 (211)
|.++++++++|||||++||.+++++|. ++|++|+.++|+.++.. . ..-.++ ++.+|+++++++.+.
T Consensus 1 ~~~~~~~~~lITGASsGIG~~~A~~lA-----~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~-vi~~DLs~~~~~~~l 74 (265)
T COG0300 1 PGPMKGKTALITGASSGIGAELAKQLA-----RRGYNLILVARREDKLEALAKELEDKTGVEVE-VIPADLSDPEALERL 74 (265)
T ss_pred CCCCCCcEEEEECCCchHHHHHHHHHH-----HCCCEEEEEeCcHHHHHHHHHHHHHhhCceEE-EEECcCCChhHHHHH
Confidence 345667999999999999999999999 79999999999987521 1 124567 899999999887776
Q ss_pred HHhccc---ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCC
Q 028258 76 LSLISQ---EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFD 143 (211)
Q Consensus 76 ~~~~~~---~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~ 143 (211)
...+.. .||.+|++||.... ...+.+++|+.++..|..++...+-+. +-.+++.++|...|..
T Consensus 75 ~~~l~~~~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~-~~G~IiNI~S~ag~~p---- 149 (265)
T COG0300 75 EDELKERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVER-GAGHIINIGSAAGLIP---- 149 (265)
T ss_pred HHHHHhcCCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCceEEEEechhhcCC----
Confidence 654322 38999999987431 234577999988777666665443101 2357788877554420
Q ss_pred ccccCCCCCCCCCCcCCCCCCCCCCcchhHH-------HHHhh--cCCCceEEEecCCceEec
Q 028258 144 PSLAGQLMPYEVPFKEDSSRLPFPNFYYELE-------DVSAS--YSPAITYSVHRSSVIIGA 197 (211)
Q Consensus 144 ~~~~g~~~~~~~~~~e~~~~~~~~~~~~~~e-------~~l~~--~~~~~~~~i~Rp~~i~G~ 197 (211)
. |....|++.+ +.|.. +..|+.++.+.|+.+.-+
T Consensus 150 -----------------~---p~~avY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~ 192 (265)
T COG0300 150 -----------------T---PYMAVYSATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTE 192 (265)
T ss_pred -----------------C---cchHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEecCccccc
Confidence 0 1112343322 22222 568899999999887644
|
|
| >PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.7e-14 Score=117.72 Aligned_cols=127 Identities=10% Similarity=0.029 Sum_probs=94.7
Q ss_pred CccccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcc
Q 028258 1 MEKQDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLIS 80 (211)
Q Consensus 1 ~~~~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~ 80 (211)
|.+...+++|++|||||+|+||++++++|+ ++|++|++++|++... ....+. ++.+|++|++++.+.++.+.
T Consensus 1 ~~~~~~l~~k~vlItG~s~gIG~~la~~l~-----~~G~~v~~~~~~~~~~--~~~~~~-~~~~D~~~~~~~~~~~~~~~ 72 (266)
T PRK06171 1 MQDWLNLQGKIIIVTGGSSGIGLAIVKELL-----ANGANVVNADIHGGDG--QHENYQ-FVPTDVSSAEEVNHTVAEII 72 (266)
T ss_pred CcccccCCCCEEEEeCCCChHHHHHHHHHH-----HCCCEEEEEeCCcccc--ccCceE-EEEccCCCHHHHHHHHHHHH
Confidence 555555667999999999999999999999 6999999999877643 234678 89999999998888776642
Q ss_pred c---ccceEEeecccCC------------------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCee
Q 028258 81 Q---EITNLFWVPLQVQ------------------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKH 136 (211)
Q Consensus 81 ~---~~~~v~~~a~~~~------------------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~ 136 (211)
. .+|++||+++... .++...+++|+.++..+++++...+... +-.+++++||...
T Consensus 73 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~isS~~~ 148 (266)
T PRK06171 73 EKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQ-HDGVIVNMSSEAG 148 (266)
T ss_pred HHcCCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhc-CCcEEEEEccccc
Confidence 1 3899999997521 1344567899999988888877542101 2246788877543
|
|
| >TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=99.63 E-value=5.4e-15 Score=119.55 Aligned_cols=162 Identities=14% Similarity=0.050 Sum_probs=106.2
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHhcc--
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSLIS-- 80 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~-- 80 (211)
|++|||||+|+||++++++|+ ++|++|++++|++.... ....+++ ++.+|++|++++..+++.+.
T Consensus 2 ~~vlItGa~g~lG~~l~~~l~-----~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~ 75 (255)
T TIGR01963 2 KTALVTGAASGIGLAIALALA-----AAGANVVVNDLGEAGAEAAAKVATDAGGSVI-YLVADVTKEDEIADMIAAAAAE 75 (255)
T ss_pred CEEEEcCCcchHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCceE-EEECCCCCHHHHHHHHHHHHHh
Confidence 689999999999999999999 68999999999764311 0124578 89999999998877665542
Q ss_pred -cccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCC
Q 028258 81 -QEITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQL 150 (211)
Q Consensus 81 -~~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~ 150 (211)
..+|+|||+++.... +....++.|..++..+++++...+. ..+.++|+++||...+.+.
T Consensus 76 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~-~~~~~~~v~~ss~~~~~~~---------- 144 (255)
T TIGR01963 76 FGGLDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMK-KQGWGRIINIASAHGLVAS---------- 144 (255)
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-hcCCeEEEEEcchhhcCCC----------
Confidence 127999999976321 2334567898887777777643210 1145788888875443210
Q ss_pred CCCCCCCcCCCCCCCCCCcchhHHHHHh----h-cCCCceEEEecCCceEecC
Q 028258 151 MPYEVPFKEDSSRLPFPNFYYELEDVSA----S-YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 151 ~~~~~~~~e~~~~~~~~~~~~~~e~~l~----~-~~~~~~~~i~Rp~~i~G~~ 198 (211)
+. ..+ ........+.+.. + ...+++++++||+.++++.
T Consensus 145 -----~~--~~~---y~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~ 187 (255)
T TIGR01963 145 -----PF--KSA---YVAAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPL 187 (255)
T ss_pred -----CC--Cch---hHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHH
Confidence 00 000 0011111122221 1 2358999999999999875
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. |
| >PRK06194 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=7.1e-15 Score=121.31 Aligned_cols=126 Identities=14% Similarity=-0.055 Sum_probs=89.4
Q ss_pred CCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 6 QNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 6 ~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
.+.++++|||||+|+||++++++|+ ++|++|++++|+..... ....++. ++.+|++|.+++.++++.
T Consensus 3 ~~~~k~vlVtGasggIG~~la~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~D~~d~~~~~~~~~~ 76 (287)
T PRK06194 3 DFAGKVAVITGAASGFGLAFARIGA-----ALGMKLVLADVQQDALDRAVAELRAQGAEVL-GVRTDVSDAAQVEALADA 76 (287)
T ss_pred CCCCCEEEEeCCccHHHHHHHHHHH-----HCCCEEEEEeCChHHHHHHHHHHHhcCCeEE-EEECCCCCHHHHHHHHHH
Confidence 3445899999999999999999999 68999999998754311 0123567 799999999988887775
Q ss_pred ccc---ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCC-----ceEEEEeecCeee
Q 028258 79 ISQ---EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSR-----LRHVALLTGTKHY 137 (211)
Q Consensus 79 ~~~---~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-----~~~~~~~s~~~~y 137 (211)
+.. .+|.|||+|+.... ++...+++|+.++.++++++...+..... ..+++++||...|
T Consensus 77 ~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~ 152 (287)
T PRK06194 77 ALERFGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGL 152 (287)
T ss_pred HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhc
Confidence 421 27999999987431 33456789999988877774332100111 2478888876544
|
|
| >PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.1e-14 Score=117.06 Aligned_cols=124 Identities=18% Similarity=-0.026 Sum_probs=89.8
Q ss_pred CCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 6 QNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 6 ~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
++.+++++||||+|+||++++++|+ ++|++|++++|++.+.. ....++. ++.+|+++++++.++++.
T Consensus 4 ~~~~~~vlVtG~sg~iG~~l~~~L~-----~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~ 77 (239)
T PRK07666 4 SLQGKNALITGAGRGIGRAVAIALA-----KEGVNVGLLARTEENLKAVAEEVEAYGVKVV-IATADVSDYEEVTAAIEQ 77 (239)
T ss_pred cCCCCEEEEEcCCchHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHHhCCeEE-EEECCCCCHHHHHHHHHH
Confidence 3446889999999999999999999 68999999999764310 0124677 899999999988887765
Q ss_pred ccc---ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCee
Q 028258 79 ISQ---EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKH 136 (211)
Q Consensus 79 ~~~---~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~ 136 (211)
+.. .+|.|||+++.... ++...+++|+.++.++.+++...+. ..+..+++++|+...
T Consensus 78 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~iv~~ss~~~ 146 (239)
T PRK07666 78 LKNELGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMI-ERQSGDIINISSTAG 146 (239)
T ss_pred HHHHcCCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-hCCCcEEEEEcchhh
Confidence 421 28999999876321 2345678999998888887764310 113467787777443
|
|
| >PRK07890 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=5.8e-15 Score=119.78 Aligned_cols=164 Identities=15% Similarity=-0.006 Sum_probs=110.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----C--CCCCceeEEEeeCCCHHHHHHHHHhcc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----F--PTALVDRYITFDALDPTDTALKLSLIS 80 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----~--~~~~~~~~i~~Dl~d~~~~~~~~~~~~ 80 (211)
++|++|||||||+||++++++|+ ++|++|++++|++.... . ...+++ ++.+|++|++++...++.+.
T Consensus 4 ~~k~vlItGa~~~IG~~la~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~ 77 (258)
T PRK07890 4 KGKVVVVSGVGPGLGRTLAVRAA-----RAGADVVLAARTAERLDEVAAEIDDLGRRAL-AVPTDITDEDQCANLVALAL 77 (258)
T ss_pred CCCEEEEECCCCcHHHHHHHHHH-----HcCCEEEEEeCCHHHHHHHHHHHHHhCCceE-EEecCCCCHHHHHHHHHHHH
Confidence 45889999999999999999999 79999999999764311 0 124578 89999999998877776541
Q ss_pred ---cccceEEeecccCC----------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCcccc
Q 028258 81 ---QEITNLFWVPLQVQ----------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLA 147 (211)
Q Consensus 81 ---~~~~~v~~~a~~~~----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~ 147 (211)
..+|++||+++... .++...+++|+.++..+++++...+.+. ..+|+++||...+..
T Consensus 78 ~~~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~ii~~sS~~~~~~-------- 147 (258)
T PRK07890 78 ERFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAES--GGSIVMINSMVLRHS-------- 147 (258)
T ss_pred HHcCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC--CCEEEEEechhhccC--------
Confidence 12899999997532 1345567899999999999887542111 147888877533210
Q ss_pred CCCCCCCCCCcCCCCCCCCCCcchhHHHHHhh-----cCCCceEEEecCCceEecCC
Q 028258 148 GQLMPYEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 148 g~~~~~~~~~~e~~~~~~~~~~~~~~e~~l~~-----~~~~~~~~i~Rp~~i~G~~~ 199 (211)
... .+ .........+.+.+. ...++++..+||+.++++..
T Consensus 148 ---------~~~-~~--~Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~ 192 (258)
T PRK07890 148 ---------QPK-YG--AYKMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDPL 192 (258)
T ss_pred ---------CCC-cc--hhHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHH
Confidence 000 00 001111222222222 24689999999999999854
|
|
| >PRK07024 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=4.7e-15 Score=120.64 Aligned_cols=160 Identities=12% Similarity=-0.042 Sum_probs=106.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----C-CCCCceeEEEeeCCCHHHHHHHHHhccc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----F-PTALVDRYITFDALDPTDTALKLSLISQ 81 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----~-~~~~~~~~i~~Dl~d~~~~~~~~~~~~~ 81 (211)
|+++++||||||+||++++++|+ +.|++|++++|++.... . ...++. ++.+|++|++++.+.++.+..
T Consensus 1 ~~~~vlItGas~gIG~~la~~l~-----~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~i~~~~~~~~~ 74 (257)
T PRK07024 1 MPLKVFITGASSGIGQALAREYA-----RQGATLGLVARRTDALQAFAARLPKAARVS-VYAADVRDADALAAAAADFIA 74 (257)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHhcccCCeeE-EEEcCCCCHHHHHHHHHHHHH
Confidence 34789999999999999999999 68999999999764311 1 112678 899999999988877765421
Q ss_pred ---ccceEEeecccCC----------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccC
Q 028258 82 ---EITNLFWVPLQVQ----------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAG 148 (211)
Q Consensus 82 ---~~~~v~~~a~~~~----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g 148 (211)
.+|++||+++... ..+...+++|+.++.++++++...+... +..+|+.+||...+.+
T Consensus 75 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~-~~~~iv~isS~~~~~~--------- 144 (257)
T PRK07024 75 AHGLPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAA-RRGTLVGIASVAGVRG--------- 144 (257)
T ss_pred hCCCCCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhc-CCCEEEEEechhhcCC---------
Confidence 2799999987532 1244567899999888777544321101 3357787776433211
Q ss_pred CCCCCCCCCcCCCCCCCCCCcc----hhHHHHHhh-----cCCCceEEEecCCceEecC
Q 028258 149 QLMPYEVPFKEDSSRLPFPNFY----YELEDVSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 149 ~~~~~~~~~~e~~~~~~~~~~~----~~~e~~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
.. ....| ...+.+... +..+++++++||+.+.++.
T Consensus 145 --------~~-------~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~ 188 (257)
T PRK07024 145 --------LP-------GAGAYSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTPM 188 (257)
T ss_pred --------CC-------CCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCch
Confidence 00 00112 122222211 3578999999999998874
|
|
| >PRK08628 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.3e-14 Score=117.80 Aligned_cols=163 Identities=9% Similarity=0.007 Sum_probs=109.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC------CCCCCceeEEEeeCCCHHHHHHHHHhccc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW------FPTALVDRYITFDALDPTDTALKLSLISQ 81 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~ 81 (211)
++|++|||||||+||++++++|+ ++|++|++++|+++... ....+++ ++.+|+++++++...++++..
T Consensus 6 ~~~~ilItGasggiG~~la~~l~-----~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~ 79 (258)
T PRK08628 6 KDKVVIVTGGASGIGAAISLRLA-----EEGAIPVIFGRSAPDDEFAEELRALQPRAE-FVQVDLTDDAQCRDAVEQTVA 79 (258)
T ss_pred CCCEEEEeCCCChHHHHHHHHHH-----HcCCcEEEEcCChhhHHHHHHHHhcCCceE-EEEccCCCHHHHHHHHHHHHH
Confidence 46899999999999999999999 68999999998765421 0134678 999999999988887765421
Q ss_pred ---ccceEEeecccCC--------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCC
Q 028258 82 ---EITNLFWVPLQVQ--------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQL 150 (211)
Q Consensus 82 ---~~~~v~~~a~~~~--------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~ 150 (211)
.+|.|||+++... .++...+++|+.++.++.+.+.+.+. ....+|+++||...+.+.
T Consensus 80 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~~iv~~ss~~~~~~~---------- 147 (258)
T PRK08628 80 KFGRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLK--ASRGAIVNISSKTALTGQ---------- 147 (258)
T ss_pred hcCCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhh--ccCcEEEEECCHHhccCC----------
Confidence 2899999998532 13445678899888888887764321 123578888774332110
Q ss_pred CCCCCCCcCCCCCCCCCCcchhHHHHHhh-----cCCCceEEEecCCceEecC
Q 028258 151 MPYEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 151 ~~~~~~~~e~~~~~~~~~~~~~~e~~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
. ... .....+...+.+.+. ..+++.+..+||+.++++.
T Consensus 148 ----~----~~~--~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~ 190 (258)
T PRK08628 148 ----G----GTS--GYAAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPL 190 (258)
T ss_pred ----C----CCc--hhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHH
Confidence 0 000 000111122222222 3568999999999999874
|
|
| >PRK07856 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=2.4e-14 Score=116.07 Aligned_cols=123 Identities=16% Similarity=0.069 Sum_probs=91.4
Q ss_pred CCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhccc---c
Q 028258 6 QNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQ---E 82 (211)
Q Consensus 6 ~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~---~ 82 (211)
++++|++|||||+|+||++++++|+ +.|++|++++|++... .....++ ++.+|++|++++.+.++.+.. .
T Consensus 3 ~~~~k~~lItGas~gIG~~la~~l~-----~~g~~v~~~~r~~~~~-~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~~ 75 (252)
T PRK07856 3 DLTGRVVLVTGGTRGIGAGIARAFL-----AAGATVVVCGRRAPET-VDGRPAE-FHAADVRDPDQVAALVDAIVERHGR 75 (252)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHH-----HCCCEEEEEeCChhhh-hcCCceE-EEEccCCCHHHHHHHHHHHHHHcCC
Confidence 3457999999999999999999999 6899999999976531 1235678 899999999988887766521 2
Q ss_pred cceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 83 ITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 83 ~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
+|++||+++... ..+...+++|+.++.++++++...+....+..+|+++||..
T Consensus 76 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~ 137 (252)
T PRK07856 76 LDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVS 137 (252)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccc
Confidence 799999997532 13456779999999999988765321011235778887753
|
|
| >TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=99.62 E-value=9.5e-15 Score=143.37 Aligned_cols=179 Identities=12% Similarity=0.037 Sum_probs=114.0
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC---------------C--CCCCceeEEEeeCCCH--
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW---------------F--PTALVDRYITFDALDP-- 69 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~---------------~--~~~~~~~~i~~Dl~d~-- 69 (211)
.++|||||||||+|++++++|++... ...++|+++.|...... . ...+++ ++.+|++++
T Consensus 971 ~~~VlvTGatGflG~~l~~~Ll~~~~-~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~-~~~gDl~~~~l 1048 (1389)
T TIGR03443 971 PITVFLTGATGFLGSFILRDLLTRRS-NSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIE-VVLGDLSKEKF 1048 (1389)
T ss_pred CceEEEeCCccccHHHHHHHHHhcCC-CCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceE-EEeccCCCccC
Confidence 57899999999999999999994100 12388999999754210 0 013688 999999865
Q ss_pred ----HHHHHHHHhcccccceEEeecccCCc--hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCC
Q 028258 70 ----TDTALKLSLISQEITNLFWVPLQVQE--SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFD 143 (211)
Q Consensus 70 ----~~~~~~~~~~~~~~~~v~~~a~~~~~--~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~ 143 (211)
+.+.+...+ +|+|||+|+.... ........|+.++.++++++... ++++|+++||..+|+....
T Consensus 1049 gl~~~~~~~l~~~----~d~iiH~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~-----~~~~~v~vSS~~v~~~~~~- 1118 (1389)
T TIGR03443 1049 GLSDEKWSDLTNE----VDVIIHNGALVHWVYPYSKLRDANVIGTINVLNLCAEG-----KAKQFSFVSSTSALDTEYY- 1118 (1389)
T ss_pred CcCHHHHHHHHhc----CCEEEECCcEecCccCHHHHHHhHHHHHHHHHHHHHhC-----CCceEEEEeCeeecCcccc-
Confidence 334443332 7899999987542 33344467999999999999875 5789999999999863210
Q ss_pred ccccCCC--CCCCCCCcCCCCCCC---CCCcchhHHHHHhh------cCCCceEEEecCCceEecCCC
Q 028258 144 PSLAGQL--MPYEVPFKEDSSRLP---FPNFYYELEDVSAS------YSPAITYSVHRSSVIIGASPR 200 (211)
Q Consensus 144 ~~~~g~~--~~~~~~~~e~~~~~~---~~~~~~~~e~~l~~------~~~~~~~~i~Rp~~i~G~~~~ 200 (211)
...... ......+.|+.+... .+..-|...|+..+ ...+++++++||+.|||++..
T Consensus 1119 -~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~~g~~~~i~Rpg~v~G~~~~ 1185 (1389)
T TIGR03443 1119 -VNLSDELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGKRGLRGCIVRPGYVTGDSKT 1185 (1389)
T ss_pred -cchhhhhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHhCCCCEEEECCCccccCCCc
Confidence 000000 000112333322111 11223444444433 346899999999999998653
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. |
| >PRK06138 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.2e-14 Score=117.34 Aligned_cols=164 Identities=9% Similarity=-0.070 Sum_probs=107.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC------CCCCCceeEEEeeCCCHHHHHHHHHhcc-
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW------FPTALVDRYITFDALDPTDTALKLSLIS- 80 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~- 80 (211)
++|+++||||+|+||++++++|+ ++|++|+++.|+.+... .....+. ++.+|++|++++.++++.+.
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~-----~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~i~~ 77 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFA-----REGARVVVADRDAEAAERVAAAIAAGGRAF-ARQGDVGSAEAVEALVDFVAA 77 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHH-----HCCCeEEEecCCHHHHHHHHHHHhcCCeEE-EEEcCCCCHHHHHHHHHHHHH
Confidence 46899999999999999999999 68999999999765311 0124577 89999999998888776542
Q ss_pred --cccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeee-ecccCCccccC
Q 028258 81 --QEITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY-MGPIFDPSLAG 148 (211)
Q Consensus 81 --~~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y-~~~~~~~~~~g 148 (211)
..+|.|||+++.... .+...+.+|+.++.++.+.+...+. ..+..+|+++||...+ +.+
T Consensus 78 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~ii~~sS~~~~~~~~-------- 148 (252)
T PRK06138 78 RWGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQ-RQGGGSIVNTASQLALAGGR-------- 148 (252)
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHH-hcCCeEEEEECChhhccCCC--------
Confidence 128999999986321 2344578899888776666543210 0135688888775322 210
Q ss_pred CCCCCCCCCcCCCCCCCCCCcchhHHHHHhh-----cCCCceEEEecCCceEecCC
Q 028258 149 QLMPYEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 149 ~~~~~~~~~~e~~~~~~~~~~~~~~e~~l~~-----~~~~~~~~i~Rp~~i~G~~~ 199 (211)
. .+ .........+.+... ...+++++++||+.++++..
T Consensus 149 ----------~-~~--~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~ 191 (252)
T PRK06138 149 ----------G-RA--AYVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYF 191 (252)
T ss_pred ----------C-cc--HHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcch
Confidence 0 00 000111112222221 24589999999999988754
|
|
| >PRK07326 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=7e-15 Score=117.85 Aligned_cols=124 Identities=19% Similarity=0.033 Sum_probs=90.4
Q ss_pred ccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----C-CCCCceeEEEeeCCCHHHHHHHHH
Q 028258 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----F-PTALVDRYITFDALDPTDTALKLS 77 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----~-~~~~~~~~i~~Dl~d~~~~~~~~~ 77 (211)
|+.+++++++||||||+||++++++|+ +.|++|++++|++.+.. . ....++ ++.+|++|.+++.+.++
T Consensus 1 m~~~~~~~ilItGatg~iG~~la~~l~-----~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~-~~~~D~~~~~~~~~~~~ 74 (237)
T PRK07326 1 MMSLKGKVALITGGSKGIGFAIAEALL-----AEGYKVAITARDQKELEEAAAELNNKGNVL-GLAADVRDEADVQRAVD 74 (237)
T ss_pred CCCCCCCEEEEECCCCcHHHHHHHHHH-----HCCCEEEEeeCCHHHHHHHHHHHhccCcEE-EEEccCCCHHHHHHHHH
Confidence 344557899999999999999999999 68999999999765311 0 115678 89999999998888776
Q ss_pred hccc---ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 78 LISQ---EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 78 ~~~~---~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
.+.. .+|.|||+++.... .+.+.+++|+.++.++++++...+ ..+..+++++|+..
T Consensus 75 ~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~--~~~~~~iv~~ss~~ 142 (237)
T PRK07326 75 AIVAAFGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPAL--KRGGGYIINISSLA 142 (237)
T ss_pred HHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHH--HHCCeEEEEECChh
Confidence 5421 28999999876321 234567889999888888776431 01235788887743
|
|
| >PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=1e-14 Score=118.62 Aligned_cols=162 Identities=10% Similarity=-0.082 Sum_probs=103.8
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC------CCCCCceeEEEeeCCCHHHHHHHHHhcc
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW------FPTALVDRYITFDALDPTDTALKLSLIS 80 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~ 80 (211)
+++|++|||||+|+||++++++|+ ++|++|++++|++.... .....+. ++.+|++|++++.+.++.+.
T Consensus 6 ~~~k~vlVtGas~gIG~~la~~l~-----~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~ 79 (260)
T PRK12823 6 FAGKVVVVTGAAQGIGRGVALRAA-----AEGARVVLVDRSELVHEVAAELRAAGGEAL-ALTADLETYAGAQAAMAAAV 79 (260)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHH-----HCCCEEEEEeCchHHHHHHHHHHhcCCeEE-EEEEeCCCHHHHHHHHHHHH
Confidence 346899999999999999999999 68999999999743110 0124567 88999999988777766542
Q ss_pred ---cccceEEeecccCC----------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCcccc
Q 028258 81 ---QEITNLFWVPLQVQ----------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLA 147 (211)
Q Consensus 81 ---~~~~~v~~~a~~~~----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~ 147 (211)
..+|++||+|+... .++...+++|+.++..+++.+...+... +..+|+++||...|+.+
T Consensus 80 ~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~~sS~~~~~~~------- 151 (260)
T PRK12823 80 EAFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQ-GGGAIVNVSSIATRGIN------- 151 (260)
T ss_pred HHcCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCeEEEEcCccccCCC-------
Confidence 12899999997421 1234556788877665555444321001 23578888886544210
Q ss_pred CCCCCCCCCCcCCCCCCCCCCcchhHHHHHhh-----cCCCceEEEecCCceEec
Q 028258 148 GQLMPYEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGA 197 (211)
Q Consensus 148 g~~~~~~~~~~e~~~~~~~~~~~~~~e~~l~~-----~~~~~~~~i~Rp~~i~G~ 197 (211)
..+ ....+.+.+.+.+. ...++++..++|+.++++
T Consensus 152 ------------~~~---Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~ 191 (260)
T PRK12823 152 ------------RVP---YSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAP 191 (260)
T ss_pred ------------CCc---cHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCc
Confidence 000 01111122222211 346899999999999986
|
|
| >PRK05717 oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.61 E-value=1.5e-14 Score=117.39 Aligned_cols=122 Identities=17% Similarity=0.088 Sum_probs=89.1
Q ss_pred CCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC----CCCCCceeEEEeeCCCHHHHHHHHHhccc
Q 028258 6 QNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW----FPTALVDRYITFDALDPTDTALKLSLISQ 81 (211)
Q Consensus 6 ~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~----~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~ 81 (211)
..++|+++||||+|+||++++++|+ ++|++|++++|++.+.. .....+. ++.+|++|++++.++++.+..
T Consensus 7 ~~~~k~vlItG~sg~IG~~~a~~l~-----~~g~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~ 80 (255)
T PRK05717 7 GHNGRVALVTGAARGIGLGIAAWLI-----AEGWQVVLADLDRERGSKVAKALGENAW-FIAMDVADEAQVAAGVAEVLG 80 (255)
T ss_pred ccCCCEEEEeCCcchHHHHHHHHHH-----HcCCEEEEEcCCHHHHHHHHHHcCCceE-EEEccCCCHHHHHHHHHHHHH
Confidence 4456899999999999999999999 68999999988754211 1124577 899999999887666554321
Q ss_pred ---ccceEEeecccCCc-----------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 82 ---EITNLFWVPLQVQE-----------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 82 ---~~~~v~~~a~~~~~-----------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
.+|++||+++.... ++...+++|+.++.++++++...+. ....+++++||..
T Consensus 81 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~g~ii~~sS~~ 146 (255)
T PRK05717 81 QFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLR--AHNGAIVNLASTR 146 (255)
T ss_pred HhCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH--HcCcEEEEEcchh
Confidence 28999999986421 2446779999999999999875321 0124677777643
|
|
| >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.61 E-value=3.1e-14 Score=115.14 Aligned_cols=164 Identities=10% Similarity=0.007 Sum_probs=109.3
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhccc---cc
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQ---EI 83 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~---~~ 83 (211)
+..|++|||||+|+||++++++|+ ++|++|++++|+.... ....++ ++.+|++|++++.+.++++.. .+
T Consensus 6 ~~~k~vlItGas~~iG~~la~~l~-----~~G~~v~~~~~~~~~~--~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~~i 77 (252)
T PRK08220 6 FSGKTVWVTGAAQGIGYAVALAFV-----EAGAKVIGFDQAFLTQ--EDYPFA-TFVLDVSDAAAVAQVCQRLLAETGPL 77 (252)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHH-----HCCCEEEEEecchhhh--cCCceE-EEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 346899999999999999999999 6899999999986211 235678 899999999988887765421 27
Q ss_pred ceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCC
Q 028258 84 TNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYE 154 (211)
Q Consensus 84 ~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~ 154 (211)
|.+||+++.... ++...+++|+.++.++++++...+... +..+|+++||.....
T Consensus 78 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~~ss~~~~~---------------- 140 (252)
T PRK08220 78 DVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQ-RSGAIVTVGSNAAHV---------------- 140 (252)
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC-CCCEEEEECCchhcc----------------
Confidence 999999876321 344567899999888888876432101 234677777643221
Q ss_pred CCCcCCCCCCCCCCcchhHHHHHhh-----cCCCceEEEecCCceEecCC
Q 028258 155 VPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 155 ~~~~e~~~~~~~~~~~~~~e~~l~~-----~~~~~~~~i~Rp~~i~G~~~ 199 (211)
+...... ....+...+.+... ...++++.+++|+.+.++..
T Consensus 141 -~~~~~~~---Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~ 186 (252)
T PRK08220 141 -PRIGMAA---YGASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQ 186 (252)
T ss_pred -CCCCCch---hHHHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhh
Confidence 0000000 00111122222211 24689999999999988753
|
|
| >PRK07454 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=1.7e-14 Score=116.10 Aligned_cols=127 Identities=15% Similarity=0.012 Sum_probs=90.8
Q ss_pred ccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHH
Q 028258 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKL 76 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~ 76 (211)
|...++|++|||||+|+||++++++|+ ++|++|++++|++.+.. ....++. ++.+|++|++++..++
T Consensus 1 ~~~~~~k~vlItG~sg~iG~~la~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~ 74 (241)
T PRK07454 1 MSLNSMPRALITGASSGIGKATALAFA-----KAGWDLALVARSQDALEALAAELRSTGVKAA-AYSIDLSNPEAIAPGI 74 (241)
T ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhCCCcEE-EEEccCCCHHHHHHHH
Confidence 344456899999999999999999999 68999999999765311 0124678 8999999999887777
Q ss_pred Hhccc---ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeee
Q 028258 77 SLISQ---EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 137 (211)
Q Consensus 77 ~~~~~---~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y 137 (211)
+.+.. .+|.+||+++.... ++...+.+|+.++.++++.+...+. ..+..+++++||...|
T Consensus 75 ~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~~~iv~isS~~~~ 146 (241)
T PRK07454 75 AELLEQFGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMR-ARGGGLIINVSSIAAR 146 (241)
T ss_pred HHHHHHcCCCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHH-hcCCcEEEEEccHHhC
Confidence 65321 28999999986321 3445678899888787776644310 1134678888876544
|
|
| >TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.4e-14 Score=116.89 Aligned_cols=164 Identities=13% Similarity=-0.024 Sum_probs=109.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHhcc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSLIS 80 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~ 80 (211)
+++++|||||||+||++++++|+ ++|++|++++|+..... ....+++ ++.+|++|.+++.+.++.+.
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~-----~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~~~~ 75 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFA-----EEGAKVAVFDLNREAAEKVAADIRAKGGNAQ-AFACDITDRDSVDTAVAAAE 75 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHH-----HCCCEEEEecCCHHHHHHHHHHHHhcCCcEE-EEEcCCCCHHHHHHHHHHHH
Confidence 35889999999999999999999 68999999998764311 0134678 89999999998887776542
Q ss_pred ---cccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccC
Q 028258 81 ---QEITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAG 148 (211)
Q Consensus 81 ---~~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g 148 (211)
..+|++||+++... ..+...+++|+.++.++++++...+... +..+++++||...|.+..
T Consensus 76 ~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~ii~iss~~~~~~~~------- 147 (250)
T TIGR03206 76 QALGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVER-GAGRIVNIASDAARVGSS------- 147 (250)
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCeEEEEECchhhccCCC-------
Confidence 12799999997532 1234567899999988888776432101 346788888865553210
Q ss_pred CCCCCCCCCcCCCCCCCCCCcchhHHHHHhh-----cCCCceEEEecCCceEecC
Q 028258 149 QLMPYEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 149 ~~~~~~~~~~e~~~~~~~~~~~~~~e~~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
..+ .......+.+.+... ...+++++++||+.++++.
T Consensus 148 -----------~~~--~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~ 189 (250)
T TIGR03206 148 -----------GEA--VYAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTAL 189 (250)
T ss_pred -----------CCc--hHHHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchh
Confidence 000 000111111112111 2358999999999998874
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. |
| >PRK06128 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=2.2e-14 Score=119.49 Aligned_cols=163 Identities=9% Similarity=-0.063 Sum_probs=109.7
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC---------CCCCCceeEEEeeCCCHHHHHHHHH
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW---------FPTALVDRYITFDALDPTDTALKLS 77 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~---------~~~~~~~~~i~~Dl~d~~~~~~~~~ 77 (211)
+++|++|||||+|+||++++++|+ +.|++|+++.|+..... .....+. ++.+|++|++++.++++
T Consensus 53 l~~k~vlITGas~gIG~~~a~~l~-----~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~v~~~~~ 126 (300)
T PRK06128 53 LQGRKALITGADSGIGRATAIAFA-----REGADIALNYLPEEEQDAAEVVQLIQAEGRKAV-ALPGDLKDEAFCRQLVE 126 (300)
T ss_pred cCCCEEEEecCCCcHHHHHHHHHH-----HcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEE-EEecCCCCHHHHHHHHH
Confidence 346899999999999999999999 68999988776543210 0123567 88999999988877776
Q ss_pred hccc---ccceEEeecccCC----------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCc
Q 028258 78 LISQ---EITNLFWVPLQVQ----------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDP 144 (211)
Q Consensus 78 ~~~~---~~~~v~~~a~~~~----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~ 144 (211)
.+.. .+|++||+|+... .++...+++|+.++.++++++...+. .-.+|+++||...|...
T Consensus 127 ~~~~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~---~~~~iv~~sS~~~~~~~---- 199 (300)
T PRK06128 127 RAVKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLP---PGASIINTGSIQSYQPS---- 199 (300)
T ss_pred HHHHHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcC---cCCEEEEECCccccCCC----
Confidence 5421 3899999998531 13556789999999999999876531 12478888886655321
Q ss_pred cccCCCCCCCCCCcCCCCCCCCCCcchhHHHHHhh-----cCCCceEEEecCCceEecC
Q 028258 145 SLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 145 ~~~g~~~~~~~~~~e~~~~~~~~~~~~~~e~~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
+ ... .....+.+.+.+... ...|+++..++|+.+.++-
T Consensus 200 -----------~---~~~--~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~ 242 (300)
T PRK06128 200 -----------P---TLL--DYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPL 242 (300)
T ss_pred -----------C---Cch--hHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCC
Confidence 0 000 000111112222211 3468999999999998874
|
|
| >PRK09291 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.5e-14 Score=117.30 Aligned_cols=117 Identities=14% Similarity=-0.013 Sum_probs=83.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHhcc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSLIS 80 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~ 80 (211)
|+|++|||||||+||++++++|+ +.|++|+++.|++.... .....++ ++.+|++|++++..++..
T Consensus 1 m~~~vlVtGasg~iG~~ia~~l~-----~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~-- 72 (257)
T PRK09291 1 MSKTILITGAGSGFGREVALRLA-----RKGHNVIAGVQIAPQVTALRAEAARRGLALR-VEKLDLTDAIDRAQAAEW-- 72 (257)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCcce-EEEeeCCCHHHHHHHhcC--
Confidence 35789999999999999999999 68999999999754210 1124578 899999999988887653
Q ss_pred cccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 81 QEITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 81 ~~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
.+|.|||+++.... .+...+++|+.++.++.+.+...+. ..+..+|+++||.
T Consensus 73 -~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~~~iv~~SS~ 133 (257)
T PRK09291 73 -DVDVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMV-ARGKGKVVFTSSM 133 (257)
T ss_pred -CCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-hcCCceEEEEcCh
Confidence 28999999986421 2345677888876666554432210 1134688888874
|
|
| >PRK07577 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=3.1e-14 Score=113.83 Aligned_cols=159 Identities=15% Similarity=0.059 Sum_probs=105.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhccc--ccce
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQ--EITN 85 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~--~~~~ 85 (211)
..|++|||||||+||++++++|+ ++|++|+++.|++... ...+ ++.+|++|++++.+.++.+.. .+|.
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~-----~~G~~v~~~~r~~~~~----~~~~-~~~~D~~~~~~~~~~~~~~~~~~~~d~ 71 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLA-----NLGHQVIGIARSAIDD----FPGE-LFACDLADIEQTAATLAQINEIHPVDA 71 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHH-----HCCCEEEEEeCCcccc----cCce-EEEeeCCCHHHHHHHHHHHHHhCCCcE
Confidence 35789999999999999999999 6899999999986642 1236 889999999887776654311 2799
Q ss_pred EEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCC
Q 028258 86 LFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVP 156 (211)
Q Consensus 86 v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~ 156 (211)
+||+++.... ++...+++|+.++.++.+++...+. ..+..+|+++||...|+.+.
T Consensus 72 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~iv~~sS~~~~~~~~--------------- 135 (234)
T PRK07577 72 IVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMK-LREQGRIVNICSRAIFGALD--------------- 135 (234)
T ss_pred EEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-HcCCcEEEEEccccccCCCC---------------
Confidence 9999986432 2344678888887777666654211 01346888888865543210
Q ss_pred CcCCCCCCCCCCcchhHHHHHhh-----cCCCceEEEecCCceEecC
Q 028258 157 FKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 157 ~~e~~~~~~~~~~~~~~e~~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
..+ ........+.+.+. ...++.++++||+.+..+.
T Consensus 136 ---~~~---Y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~ 176 (234)
T PRK07577 136 ---RTS---YSAAKSALVGCTRTWALELAEYGITVNAVAPGPIETEL 176 (234)
T ss_pred ---chH---HHHHHHHHHHHHHHHHHHHHhhCcEEEEEecCcccCcc
Confidence 000 00011112222221 3468999999999988764
|
|
| >PRK05875 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.2e-14 Score=119.33 Aligned_cols=124 Identities=13% Similarity=0.012 Sum_probs=88.8
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC--------C-CCCCceeEEEeeCCCHHHHHHHHH
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW--------F-PTALVDRYITFDALDPTDTALKLS 77 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~--------~-~~~~~~~~i~~Dl~d~~~~~~~~~ 77 (211)
+++|++|||||+|+||++++++|+ ++|++|++++|++.... . ...++. ++.+|++|++++.+.++
T Consensus 5 ~~~k~vlItGasg~IG~~la~~l~-----~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~-~~~~Dl~~~~~~~~~~~ 78 (276)
T PRK05875 5 FQDRTYLVTGGGSGIGKGVAAGLV-----AAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVR-YEPADVTDEDQVARAVD 78 (276)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHH-----HCCCeEEEEeCCHHHHHHHHHHHHhccCCCceE-EEEcCCCCHHHHHHHHH
Confidence 346899999999999999999999 68999999998754311 0 024577 88999999998877776
Q ss_pred hccc---ccceEEeecccCC----------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeee
Q 028258 78 LISQ---EITNLFWVPLQVQ----------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 137 (211)
Q Consensus 78 ~~~~---~~~~v~~~a~~~~----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y 137 (211)
.+.. .+|++||+++... .++...+++|+.++.++++++.+.+... +-.+|+++||...+
T Consensus 79 ~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~~sS~~~~ 150 (276)
T PRK05875 79 AATAWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRG-GGGSFVGISSIAAS 150 (276)
T ss_pred HHHHHcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEEechhhc
Confidence 5411 2799999997431 1244567889999988888765542000 12478888775443
|
|
| >PRK08643 acetoin reductase; Validated | Back alignment and domain information |
|---|
Probab=99.60 E-value=3e-14 Score=115.64 Aligned_cols=122 Identities=11% Similarity=-0.040 Sum_probs=86.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHhcc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSLIS 80 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~ 80 (211)
|+|++|||||+|+||++++++|+ ++|++|++++|++.... ....++. ++.+|++|++++.+.++.+.
T Consensus 1 ~~k~~lItGas~giG~~la~~l~-----~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~ 74 (256)
T PRK08643 1 MSKVALVTGAGQGIGFAIAKRLV-----EDGFKVAIVDYNEETAQAAADKLSKDGGKAI-AVKADVSDRDQVFAAVRQVV 74 (256)
T ss_pred CCCEEEEECCCChHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCeEE-EEECCCCCHHHHHHHHHHHH
Confidence 46899999999999999999999 68999999999764310 0124567 88999999998887776542
Q ss_pred c---ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 81 Q---EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 81 ~---~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
. .+|++||+++.... .+...+++|+.++..+++.+...+.....-.+++++||..
T Consensus 75 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~ 141 (256)
T PRK08643 75 DTFGDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQA 141 (256)
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccc
Confidence 1 38999999976321 2345678899887777766654321011124677777643
|
|
| >PRK08267 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=3.5e-14 Score=115.55 Aligned_cols=118 Identities=13% Similarity=-0.011 Sum_probs=87.9
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----CCCCCceeEEEeeCCCHHHHHHHHHhcc----
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----FPTALVDRYITFDALDPTDTALKLSLIS---- 80 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~~~~---- 80 (211)
|++|||||||+||++++++|+ ++|++|++++|++.... .....++ ++.+|++|.+++.+.++.+.
T Consensus 2 k~vlItGasg~iG~~la~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~v~~~~~~~~~~~~ 75 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFA-----AEGWRVGAYDINEAGLAALAAELGAGNAW-TGALDVTDRAAWDAALADFAAATG 75 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHH-----HCCCeEEEEeCCHHHHHHHHHHhcCCceE-EEEecCCCHHHHHHHHHHHHHHcC
Confidence 789999999999999999999 68999999999765321 1134678 99999999998888776541
Q ss_pred cccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 81 QEITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 81 ~~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
..+|+|||+++.... ++...+++|+.++.++++++...+... +..+++++||.
T Consensus 76 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~isS~ 137 (260)
T PRK08267 76 GRLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKAT-PGARVINTSSA 137 (260)
T ss_pred CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCCEEEEeCch
Confidence 137999999986431 344567999999988888775432111 23567777664
|
|
| >PRK07985 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=4.7e-14 Score=117.30 Aligned_cols=159 Identities=12% Similarity=-0.082 Sum_probs=108.3
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC---------CCCCCceeEEEeeCCCHHHHHHHHH
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW---------FPTALVDRYITFDALDPTDTALKLS 77 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~---------~~~~~~~~~i~~Dl~d~~~~~~~~~ 77 (211)
+.+|++|||||+|+||++++++|+ ++|++|+++.|+..... .....+. ++.+|++|++++.+.++
T Consensus 47 ~~~k~vlITGas~gIG~aia~~L~-----~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~ 120 (294)
T PRK07985 47 LKDRKALVTGGDSGIGRAAAIAYA-----REGADVAISYLPVEEEDAQDVKKIIEECGRKAV-LLPGDLSDEKFARSLVH 120 (294)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHH-----HCCCEEEEecCCcchhhHHHHHHHHHHcCCeEE-EEEccCCCHHHHHHHHH
Confidence 445899999999999999999999 68999998776533110 0123567 88999999988877766
Q ss_pred hccc---ccceEEeecccCC----------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCc
Q 028258 78 LISQ---EITNLFWVPLQVQ----------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDP 144 (211)
Q Consensus 78 ~~~~---~~~~v~~~a~~~~----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~ 144 (211)
.+.. .+|+++|+++... .++...+++|+.++.++++++...+. .-.+|+++||...|...
T Consensus 121 ~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~---~~g~iv~iSS~~~~~~~---- 193 (294)
T PRK07985 121 EAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLP---KGASIITTSSIQAYQPS---- 193 (294)
T ss_pred HHHHHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhh---cCCEEEEECCchhccCC----
Confidence 5421 3799999987521 14556789999999999988876421 12478888876554310
Q ss_pred cccCCCCCCCCCCcCCCCCCCCCCcchh----HHHHHhh-----cCCCceEEEecCCceEecC
Q 028258 145 SLAGQLMPYEVPFKEDSSRLPFPNFYYE----LEDVSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 145 ~~~g~~~~~~~~~~e~~~~~~~~~~~~~----~e~~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
+ ....|.. .+.+... ...|+++..++|+.+.++-
T Consensus 194 -----------------~---~~~~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~ 236 (294)
T PRK07985 194 -----------------P---HLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTAL 236 (294)
T ss_pred -----------------C---CcchhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCcccc
Confidence 0 0011222 1111111 2468999999999999873
|
|
| >PRK08219 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=2e-14 Score=114.30 Aligned_cols=120 Identities=14% Similarity=0.096 Sum_probs=84.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC---CCCCCceeEEEeeCCCHHHHHHHHHhcccccc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW---FPTALVDRYITFDALDPTDTALKLSLISQEIT 84 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~---~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~ 84 (211)
|+|++|||||+|++|++++++|+ ++ ++|++++|++.... ...++++ ++.+|++|++++.++++.... +|
T Consensus 2 ~~~~vlVtG~~g~iG~~l~~~l~-----~~-~~V~~~~r~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~-id 73 (227)
T PRK08219 2 ERPTALITGASRGIGAAIARELA-----PT-HTLLLGGRPAERLDELAAELPGAT-PFPVDLTDPEAIAAAVEQLGR-LD 73 (227)
T ss_pred CCCEEEEecCCcHHHHHHHHHHH-----hh-CCEEEEeCCHHHHHHHHHHhccce-EEecCCCCHHHHHHHHHhcCC-CC
Confidence 35789999999999999999999 56 89999999765311 0124678 999999999999998887643 89
Q ss_pred eEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeee
Q 028258 85 NLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 137 (211)
Q Consensus 85 ~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y 137 (211)
.|||+++.... .+...+.+|..+..++.+.+.+.+. ....+++++||...+
T Consensus 74 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~~~v~~ss~~~~ 133 (227)
T PRK08219 74 VLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALR--AAHGHVVFINSGAGL 133 (227)
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH--hCCCeEEEEcchHhc
Confidence 99999986432 2344567788774444444332110 012567888775544
|
|
| >PRK06197 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=3.2e-14 Score=118.75 Aligned_cols=123 Identities=19% Similarity=0.085 Sum_probs=89.0
Q ss_pred ccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC---------CCCCCceeEEEeeCCCHHHHHH
Q 028258 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW---------FPTALVDRYITFDALDPTDTAL 74 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~---------~~~~~~~~~i~~Dl~d~~~~~~ 74 (211)
|...++|+++||||||+||++++++|+ +.|++|+++.|+..+.. .....++ ++.+|++|.+++.+
T Consensus 11 ~~~~~~k~vlItGas~gIG~~~a~~l~-----~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~-~~~~Dl~d~~~v~~ 84 (306)
T PRK06197 11 IPDQSGRVAVVTGANTGLGYETAAALA-----AKGAHVVLAVRNLDKGKAAAARITAATPGADVT-LQELDLTSLASVRA 84 (306)
T ss_pred cccCCCCEEEEcCCCCcHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceE-EEECCCCCHHHHHH
Confidence 444567899999999999999999999 68999999999754310 0124577 88999999998888
Q ss_pred HHHhccc---ccceEEeecccCC-------chhHHHHhhcHHH----HHHHHHHHHhcCCCCCCceEEEEeecCeee
Q 028258 75 KLSLISQ---EITNLFWVPLQVQ-------ESEEVNIFKNSTM----LKNVLSVLVSSNSGRSRLRHVALLTGTKHY 137 (211)
Q Consensus 75 ~~~~~~~---~~~~v~~~a~~~~-------~~~~~~~~~n~~~----~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y 137 (211)
+++.+.. .+|++||+|+... +.+...+++|+.+ +..+++.+++. +..+|+++||...+
T Consensus 85 ~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~-----~~~~iV~vSS~~~~ 156 (306)
T PRK06197 85 AADALRAAYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPV-----PGSRVVTVSSGGHR 156 (306)
T ss_pred HHHHHHhhCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhC-----CCCEEEEECCHHHh
Confidence 7765421 3899999998632 1344567889888 44455555443 23688888876543
|
|
| >PRK07825 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.9e-14 Score=118.04 Aligned_cols=122 Identities=17% Similarity=-0.025 Sum_probs=88.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC---CCCCCceeEEEeeCCCHHHHHHHHHhccc---
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW---FPTALVDRYITFDALDPTDTALKLSLISQ--- 81 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~---~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~--- 81 (211)
++++++||||||+||++++++|+ ++|++|++++|+++... .....++ ++.+|++|++++.+.++.+..
T Consensus 4 ~~~~ilVtGasggiG~~la~~l~-----~~G~~v~~~~r~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~ 77 (273)
T PRK07825 4 RGKVVAITGGARGIGLATARALA-----ALGARVAIGDLDEALAKETAAELGLVV-GGPLDVTDPASFAAFLDAVEADLG 77 (273)
T ss_pred CCCEEEEeCCCchHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHhccce-EEEccCCCHHHHHHHHHHHHHHcC
Confidence 35799999999999999999999 68999999999765321 0112578 899999999988777766532
Q ss_pred ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCee
Q 028258 82 EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKH 136 (211)
Q Consensus 82 ~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~ 136 (211)
.+|.+||+++.... .+...+++|+.++.++.+++...+. ..+..+|+++||...
T Consensus 78 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~-~~~~g~iv~isS~~~ 140 (273)
T PRK07825 78 PIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMV-PRGRGHVVNVASLAG 140 (273)
T ss_pred CCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCCEEEEEcCccc
Confidence 37999999986321 2345678999888777776654321 013468888887543
|
|
| >PRK07775 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=5.5e-14 Score=115.54 Aligned_cols=125 Identities=14% Similarity=0.059 Sum_probs=89.8
Q ss_pred CCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 6 QNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 6 ~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
...+|+++||||+|+||++++++|+ ++|++|+++.|+..... .....++ ++.+|++|++++.+.++.
T Consensus 7 ~~~~~~vlVtGa~g~iG~~la~~L~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~ 80 (274)
T PRK07775 7 HPDRRPALVAGASSGIGAATAIELA-----AAGFPVALGARRVEKCEELVDKIRADGGEAV-AFPLDVTDPDSVKSFVAQ 80 (274)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCeEE-EEECCCCCHHHHHHHHHH
Confidence 3445799999999999999999999 68999999988754210 0124577 889999999998888775
Q ss_pred ccc---ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeee
Q 028258 79 ISQ---EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 137 (211)
Q Consensus 79 ~~~---~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y 137 (211)
+.. .+|++||+++.... .+...+++|+.++.++++++...+. ..+..+|+++||...|
T Consensus 81 ~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~-~~~~g~iv~isS~~~~ 150 (274)
T PRK07775 81 AEEALGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMI-ERRRGDLIFVGSDVAL 150 (274)
T ss_pred HHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-hcCCceEEEECChHhc
Confidence 421 27999999986421 2334568899999888887653210 0123578888876544
|
|
| >PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=3.5e-14 Score=114.54 Aligned_cols=123 Identities=11% Similarity=-0.004 Sum_probs=89.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----C-CCCCceeEEEeeCCCHHHHHHHHHhcc-
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----F-PTALVDRYITFDALDPTDTALKLSLIS- 80 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----~-~~~~~~~~i~~Dl~d~~~~~~~~~~~~- 80 (211)
..+++|||||||+||++++++|+ +.|++|++++|++.+.. . ....+. ++.+|++|++++...++.+.
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~ 77 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFA-----AEGARVVVTDRNEEAAERVAAEILAGGRAI-AVAADVSDEADVEAAVAAALE 77 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHhcCCeEE-EEECCCCCHHHHHHHHHHHHH
Confidence 45799999999999999999999 68999999999875321 0 124577 89999999999888776541
Q ss_pred --cccceEEeecccCC----------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeee
Q 028258 81 --QEITNLFWVPLQVQ----------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 137 (211)
Q Consensus 81 --~~~~~v~~~a~~~~----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y 137 (211)
..+|+|||+++... ..+...+++|+.++.++++.+...+. ..+.++|+++||...+
T Consensus 78 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~iv~~sS~~~~ 145 (251)
T PRK07231 78 RFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMR-GEGGGAIVNVASTAGL 145 (251)
T ss_pred HhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHH-hcCCcEEEEEcChhhc
Confidence 12899999997632 13445678899887777776664310 0134678888875444
|
|
| >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=3.2e-14 Score=115.56 Aligned_cols=123 Identities=16% Similarity=-0.020 Sum_probs=86.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC--CCCCCCceeEEEeeCCCHHHHHHHHHhccc---c
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG--WFPTALVDRYITFDALDPTDTALKLSLISQ---E 82 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~--~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~---~ 82 (211)
++|+++||||+|+||++++++|+ +.|++|+++.|+.... .....++. ++.+|++|++++.++++.+.. .
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~-----~~G~~v~~~~~~~~~~~~~l~~~~~~-~~~~Dl~~~~~~~~~~~~~~~~~~~ 79 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFL-----REGAKVAVLYNSAENEAKELREKGVF-TIKCDVGNRDQVKKSKEVVEKEFGR 79 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHH-----HCCCEEEEEeCCcHHHHHHHHhCCCe-EEEecCCCHHHHHHHHHHHHHHcCC
Confidence 46899999999999999999999 6899998887754321 11123578 899999999988888776421 2
Q ss_pred cceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeee
Q 028258 83 ITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 137 (211)
Q Consensus 83 ~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y 137 (211)
+|++||+++... .++...+++|+.++..+...+...+. ..+..+|+++||...+
T Consensus 80 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~-~~~~g~iv~isS~~~~ 142 (255)
T PRK06463 80 VDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLK-LSKNGAIVNIASNAGI 142 (255)
T ss_pred CCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHH-hcCCcEEEEEcCHHhC
Confidence 899999997632 13445678899986555444433210 0123578888875544
|
|
| >PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=6.3e-14 Score=113.92 Aligned_cols=121 Identities=11% Similarity=-0.012 Sum_probs=86.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----C----CCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----F----PTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----~----~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
|+|++|||||+|+||++++++|+ +.|++|++++|+..... . ....++ ++.+|++|.+++..+++.
T Consensus 1 m~k~ilItG~~~~IG~~la~~l~-----~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~i~~~~~~ 74 (259)
T PRK12384 1 MNQVAVVIGGGQTLGAFLCHGLA-----EEGYRVAVADINSEKAANVAQEINAEYGEGMAY-GFGADATSEQSVLALSRG 74 (259)
T ss_pred CCCEEEEECCCcHHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHHHHhcCCceeE-EEEccCCCHHHHHHHHHH
Confidence 46899999999999999999999 68999999998754310 0 013578 899999999888777765
Q ss_pred cc---cccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 79 IS---QEITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 79 ~~---~~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
+. ..+|.+||+++.... ++...+++|+.++.++++++...+.....-.+++++||.
T Consensus 75 ~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~ 142 (259)
T PRK12384 75 VDEIFGRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSK 142 (259)
T ss_pred HHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCc
Confidence 42 138999999976321 345567899999877777665532101112467777663
|
|
| >PRK05693 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=2.8e-14 Score=117.10 Aligned_cols=117 Identities=19% Similarity=0.123 Sum_probs=86.2
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-CCCCCceeEEEeeCCCHHHHHHHHHhcc---cccce
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-FPTALVDRYITFDALDPTDTALKLSLIS---QEITN 85 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-~~~~~~~~~i~~Dl~d~~~~~~~~~~~~---~~~~~ 85 (211)
|++|||||||+||++++++|+ +.|++|++++|+..... ....+++ ++.+|++|++++.+.++.+. ..+|.
T Consensus 2 k~vlItGasggiG~~la~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 75 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFK-----AAGYEVWATARKAEDVEALAAAGFT-AVQLDVNDGAALARLAEELEAEHGGLDV 75 (274)
T ss_pred CEEEEecCCChHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHCCCe-EEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence 789999999999999999999 68999999999765321 1123577 89999999998887776551 12899
Q ss_pred EEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 86 LFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 86 v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
+||+++... .++...+++|+.++.++++++...+. .+..+++++||.
T Consensus 76 vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~--~~~g~iv~isS~ 131 (274)
T PRK05693 76 LINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLR--RSRGLVVNIGSV 131 (274)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHh--hcCCEEEEECCc
Confidence 999998532 13445678999998888887754321 122466777664
|
|
| >PRK08265 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=4.4e-14 Score=115.27 Aligned_cols=124 Identities=12% Similarity=0.004 Sum_probs=91.1
Q ss_pred ccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC----CCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW----FPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~----~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
|.++.+|+++||||||+||++++++|+ ++|++|++++|++.... .....+. ++.+|++|++++.+.++.+
T Consensus 1 m~~~~~k~vlItGas~gIG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~ 74 (261)
T PRK08265 1 MIGLAGKVAIVTGGATLIGAAVARALV-----AAGARVAIVDIDADNGAAVAASLGERAR-FIATDITDDAAIERAVATV 74 (261)
T ss_pred CCCCCCCEEEEECCCChHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHhCCeeE-EEEecCCCHHHHHHHHHHH
Confidence 444556899999999999999999999 68999999999865311 1134578 8999999999888777654
Q ss_pred cc---ccceEEeecccCC--------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 80 SQ---EITNLFWVPLQVQ--------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 80 ~~---~~~~v~~~a~~~~--------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
.. .+|++||+++... .++.+.+++|+.++.++++++...+. .+-.+++++||..
T Consensus 75 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~g~ii~isS~~ 139 (261)
T PRK08265 75 VARFGRVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLA--RGGGAIVNFTSIS 139 (261)
T ss_pred HHHhCCCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHh--cCCcEEEEECchh
Confidence 21 2899999997531 13456778899988888887765421 1224677777643
|
|
| >KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.58 E-value=6.6e-15 Score=115.15 Aligned_cols=152 Identities=16% Similarity=0.130 Sum_probs=113.0
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCc--EEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccceEE
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPW--KVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITNLF 87 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~--~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~ 87 (211)
++|||||++|.+|++|++.+. +++. +-+.+. . .-.+|+++.++.+..|+..+ +.|||
T Consensus 2 ~kIlVtGg~GLVGsAi~~vv~-----~q~~~~e~wvf~-------------~-skd~DLt~~a~t~~lF~~ek--PthVI 60 (315)
T KOG1431|consen 2 KKILVTGGTGLVGSAIVKVVQ-----EQGFDDENWVFI-------------G-SKDADLTNLADTRALFESEK--PTHVI 60 (315)
T ss_pred ceEEEecCCchHHHHHHHHHH-----hcCCCCcceEEe-------------c-cccccccchHHHHHHHhccC--Cceee
Confidence 789999999999999999998 4554 111110 1 23589999999999999876 89999
Q ss_pred eecccCC------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCC
Q 028258 88 WVPLQVQ------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDS 161 (211)
Q Consensus 88 ~~a~~~~------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~ 161 (211)
|+|+... ..+.+.++.|+.+-.|++..+... +++++++..|+..|-.- ...|++|+.
T Consensus 61 hlAAmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~-----gv~K~vsclStCIfPdk------------t~yPIdEtm 123 (315)
T KOG1431|consen 61 HLAAMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEH-----GVKKVVSCLSTCIFPDK------------TSYPIDETM 123 (315)
T ss_pred ehHhhhcchhhcCCCchHHHhhcceechhHHHHHHHh-----chhhhhhhcceeecCCC------------CCCCCCHHH
Confidence 9987633 246678899999999999999887 67777777666676321 256899987
Q ss_pred CCCCC---CCcchhHHHHHhh-------cCCCceEEEecCCceEecCC
Q 028258 162 SRLPF---PNFYYELEDVSAS-------YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 162 ~~~~~---~~~~~~~e~~l~~-------~~~~~~~~i~Rp~~i~G~~~ 199 (211)
....+ .++.|+..|.+.+ .+.|++++.+-|+++|||.+
T Consensus 124 vh~gpphpsN~gYsyAKr~idv~n~aY~~qhg~~~tsviPtNvfGphD 171 (315)
T KOG1431|consen 124 VHNGPPHPSNFGYSYAKRMIDVQNQAYRQQHGRDYTSVIPTNVFGPHD 171 (315)
T ss_pred hccCCCCCCchHHHHHHHHHHHHHHHHHHHhCCceeeeccccccCCCC
Confidence 44322 2555666664443 36899999999999999985
|
|
| >PRK10538 malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=5e-14 Score=114.03 Aligned_cols=119 Identities=16% Similarity=0.065 Sum_probs=85.1
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC----CCCCCceeEEEeeCCCHHHHHHHHHhccc---c
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW----FPTALVDRYITFDALDPTDTALKLSLISQ---E 82 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~----~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~---~ 82 (211)
++++||||||+||++++++|+ ++|++|++++|++.... ....+++ ++.+|++|.+++.+.++.+.. .
T Consensus 1 ~~vlItGasg~iG~~la~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~i~~~~~~~~~~~~~ 74 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFI-----QQGHKVIATGRRQERLQELKDELGDNLY-IAQLDVRNRAAIEEMLASLPAEWRN 74 (248)
T ss_pred CEEEEECCCchHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHhccceE-EEEecCCCHHHHHHHHHHHHHHcCC
Confidence 369999999999999999999 68999999999865321 0124678 899999999988877765421 2
Q ss_pred cceEEeecccCC----------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 83 ITNLFWVPLQVQ----------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 83 ~~~v~~~a~~~~----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
+|.++|+++... ..+...+++|+.++..+++.+...+. ..+..+++++||..
T Consensus 75 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~iv~isS~~ 136 (248)
T PRK10538 75 IDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMV-ERNHGHIINIGSTA 136 (248)
T ss_pred CCEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-hcCCcEEEEECCcc
Confidence 899999997531 13345678898886666665543210 01346788887743
|
|
| >PRK12935 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=8.4e-14 Score=112.32 Aligned_cols=123 Identities=15% Similarity=-0.020 Sum_probs=88.0
Q ss_pred cCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC-CC-------CCCCCceeEEEeeCCCHHHHHHHH
Q 028258 5 DQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP-GW-------FPTALVDRYITFDALDPTDTALKL 76 (211)
Q Consensus 5 ~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~-~~-------~~~~~~~~~i~~Dl~d~~~~~~~~ 76 (211)
.++.+|++|||||+|+||++++++|+ ++|++|+++.++... .. ....++. ++.+|++|++++.+++
T Consensus 2 ~~~~~~~~lItG~s~~iG~~la~~l~-----~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~D~~~~~~~~~~~ 75 (247)
T PRK12935 2 VQLNGKVAIVTGGAKGIGKAITVALA-----QEGAKVVINYNSSKEAAENLVNELGKEGHDVY-AVQADVSKVEDANRLV 75 (247)
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHH-----HcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEE-EEECCCCCHHHHHHHH
Confidence 34456999999999999999999999 689999876554321 10 0123577 8999999999888877
Q ss_pred Hhccc---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 77 SLISQ---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 77 ~~~~~---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
+.+.. .+|+|||+++... ..+.+.+++|+.++.++++++...+... ...+++++||.
T Consensus 76 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~~sS~ 144 (247)
T PRK12935 76 EEAVNHFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEA-EEGRIISISSI 144 (247)
T ss_pred HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEEcch
Confidence 66421 2899999998633 1344567899999988888876532001 23578888774
|
|
| >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=99.57 E-value=4.9e-14 Score=113.75 Aligned_cols=166 Identities=12% Similarity=0.018 Sum_probs=109.2
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC-----CCCCCCceeEEEeeCCCHHHHHHHHHhcc-
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-----WFPTALVDRYITFDALDPTDTALKLSLIS- 80 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~-----~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~- 80 (211)
.++|++|||||+|+||++++++|+ ++|++|++++|+.... ......+. ++.+|+++++++...++.+.
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~-----~~G~~vi~~~r~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~ 76 (248)
T TIGR01832 3 LEGKVALVTGANTGLGQGIAVGLA-----EAGADIVGAGRSEPSETQQQVEALGRRFL-SLTADLSDIEAIKALVDSAVE 76 (248)
T ss_pred CCCCEEEEECCCchHHHHHHHHHH-----HCCCEEEEEcCchHHHHHHHHHhcCCceE-EEECCCCCHHHHHHHHHHHHH
Confidence 346899999999999999999999 6899999999865321 01124578 89999999998877766532
Q ss_pred --cccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCC
Q 028258 81 --QEITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQ 149 (211)
Q Consensus 81 --~~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~ 149 (211)
..+|++||+++.... .+.+.+++|+.++.++++++...+.......+++++||...|...
T Consensus 77 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~--------- 147 (248)
T TIGR01832 77 EFGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGG--------- 147 (248)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCC---------
Confidence 138999999976321 344567899998888888776432001113578888876554311
Q ss_pred CCCCCCCCcCCCCCCCCCCcchhHHHHHhh-----cCCCceEEEecCCceEecC
Q 028258 150 LMPYEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 150 ~~~~~~~~~e~~~~~~~~~~~~~~e~~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
+ ..+ .........+.+.+. ...++++..++|+.+..+.
T Consensus 148 ------~---~~~--~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~ 190 (248)
T TIGR01832 148 ------I---RVP--SYTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNN 190 (248)
T ss_pred ------C---CCc--hhHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcc
Confidence 0 000 000111122222211 3468999999999997764
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. |
| >PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=6.2e-14 Score=113.25 Aligned_cols=122 Identities=9% Similarity=-0.131 Sum_probs=87.3
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC--------CCCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW--------FPTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~--------~~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
+.++++|||||+|+||++++++|+ ++|++|+++.|+..... .....+. ++.+|+++++++...++.
T Consensus 4 ~~~~~vlitGasg~iG~~l~~~l~-----~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~ 77 (252)
T PRK06077 4 LKDKVVVVTGSGRGIGRAIAVRLA-----KEGSLVVVNAKKRAEEMNETLKMVKENGGEGI-GVLADVSTREGCETLAKA 77 (252)
T ss_pred CCCcEEEEeCCCChHHHHHHHHHH-----HCCCEEEEEeCCChHHHHHHHHHHHHcCCeeE-EEEeccCCHHHHHHHHHH
Confidence 345899999999999999999999 68999887776432100 0123566 789999999988777765
Q ss_pred ccc---ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeee
Q 028258 79 ISQ---EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 137 (211)
Q Consensus 79 ~~~---~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y 137 (211)
+.. .+|+|||+++.... .+...+++|+.+..++++++.+.+ ..-.+|+++||...|
T Consensus 78 ~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~---~~~~~iv~~sS~~~~ 145 (252)
T PRK06077 78 TIDRYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEM---REGGAIVNIASVAGI 145 (252)
T ss_pred HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHh---hcCcEEEEEcchhcc
Confidence 421 38999999986221 234567889999888888887652 122478888776544
|
|
| >PRK06123 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=5.3e-14 Score=113.46 Aligned_cols=165 Identities=12% Similarity=0.014 Sum_probs=105.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC-CC-------CCCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP-PG-------WFPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~-~~-------~~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
|++++|||||+|+||++++++|+ +.|++|+.+.++.. .. ......+. ++.+|++|.+++.++++.+
T Consensus 1 ~~~~~lVtG~~~~iG~~~a~~l~-----~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~Dl~~~~~~~~~~~~~ 74 (248)
T PRK06123 1 MRKVMIITGASRGIGAATALLAA-----ERGYAVCLNYLRNRDAAEAVVQAIRRQGGEAL-AVAADVADEADVLRLFEAV 74 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHH-----HCCCeEEEecCCCHHHHHHHHHHHHhCCCcEE-EEEeccCCHHHHHHHHHHH
Confidence 46789999999999999999999 68999887765432 11 00124577 8999999999888877654
Q ss_pred cc---ccceEEeecccCCc----------hhHHHHhhcHHHHHHHHHHHHhcCCC--CCCceEEEEeecCee-eecccCC
Q 028258 80 SQ---EITNLFWVPLQVQE----------SEEVNIFKNSTMLKNVLSVLVSSNSG--RSRLRHVALLTGTKH-YMGPIFD 143 (211)
Q Consensus 80 ~~---~~~~v~~~a~~~~~----------~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~~~~~~~~s~~~~-y~~~~~~ 143 (211)
.. .+|.|||+++.... ++...+++|+.++.++++++...+.. ...-.+|+++||... |+.+
T Consensus 75 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~--- 151 (248)
T PRK06123 75 DRELGRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSP--- 151 (248)
T ss_pred HHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCC---
Confidence 21 28999999976421 23456789999988888877654200 001135777776432 3211
Q ss_pred ccccCCCCCCCCCCcCCCCCCCCCCcchhHHHHHhh-----cCCCceEEEecCCceEecC
Q 028258 144 PSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 144 ~~~~g~~~~~~~~~~e~~~~~~~~~~~~~~e~~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
.... .....+...+.+... ...+++++++||+.++++.
T Consensus 152 ---------------~~~~--~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~ 194 (248)
T PRK06123 152 ---------------GEYI--DYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEI 194 (248)
T ss_pred ---------------CCcc--chHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCch
Confidence 0000 001111222332222 3468999999999999974
|
|
| >PRK08017 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=6.9e-14 Score=113.32 Aligned_cols=115 Identities=18% Similarity=0.148 Sum_probs=83.3
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-CCCCCceeEEEeeCCCHHHHHHHHHhcc----ccc
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-FPTALVDRYITFDALDPTDTALKLSLIS----QEI 83 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-~~~~~~~~~i~~Dl~d~~~~~~~~~~~~----~~~ 83 (211)
.|+++||||||+||+++++.|+ ++|++|++++|++.+.. ....+++ ++.+|++|.+++.+.++.+. ..+
T Consensus 2 ~k~vlVtGasg~IG~~la~~l~-----~~g~~v~~~~r~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~i~~~~~~~~ 75 (256)
T PRK08017 2 QKSVLITGCSSGIGLEAALELK-----RRGYRVLAACRKPDDVARMNSLGFT-GILLDLDDPESVERAADEVIALTDNRL 75 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHH-----HCCCEEEEEeCCHHHhHHHHhCCCe-EEEeecCCHHHHHHHHHHHHHhcCCCC
Confidence 4789999999999999999999 68999999999765421 1123578 89999999988777665542 126
Q ss_pred ceEEeecccCCc---------hhHHHHhhcHHHHHHH----HHHHHhcCCCCCCceEEEEeecC
Q 028258 84 TNLFWVPLQVQE---------SEEVNIFKNSTMLKNV----LSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 84 ~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l----~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
+.++|+++.... .+...+++|+.++.++ ++.+.+. +..+++++||.
T Consensus 76 ~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-----~~~~iv~~ss~ 134 (256)
T PRK08017 76 YGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPH-----GEGRIVMTSSV 134 (256)
T ss_pred eEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhc-----CCCEEEEEcCc
Confidence 889999875321 2345678898887775 4444443 34678888764
|
|
| >PRK07576 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=6.2e-14 Score=114.66 Aligned_cols=126 Identities=13% Similarity=-0.047 Sum_probs=91.8
Q ss_pred CccccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHH
Q 028258 1 MEKQDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTA 73 (211)
Q Consensus 1 ~~~~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~ 73 (211)
|+.|...++|++|||||+|+||++++++|+ +.|++|++++|++.... ....++. ++.+|++|++++.
T Consensus 1 ~~~~~~~~~k~ilItGasggIG~~la~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~i~ 74 (264)
T PRK07576 1 MTTMFDFAGKNVVVVGGTSGINLGIAQAFA-----RAGANVAVASRSQEKVDAAVAQLQQAGPEGL-GVSADVRDYAAVE 74 (264)
T ss_pred CCccccCCCCEEEEECCCchHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHHhCCceE-EEECCCCCHHHHH
Confidence 556665567899999999999999999999 68999999999754311 0123567 8899999999888
Q ss_pred HHHHhcc---cccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 74 LKLSLIS---QEITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 74 ~~~~~~~---~~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
+.++.+. ..+|.+||+++... .++...+++|+.++.++++++...+.. .-.+|+++|+.
T Consensus 75 ~~~~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~~g~iv~iss~ 145 (264)
T PRK07576 75 AAFAQIADEFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRR--PGASIIQISAP 145 (264)
T ss_pred HHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh--CCCEEEEECCh
Confidence 8777642 12799999986421 134456789999999998887653210 11477777764
|
|
| >PRK08251 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=6.6e-14 Score=112.99 Aligned_cols=121 Identities=12% Similarity=0.073 Sum_probs=87.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC---------CCCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW---------FPTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~---------~~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
|+|+++||||||+||++++++|+ ++|++|++++|++.... .....++ ++.+|++|++++.+.++.
T Consensus 1 ~~k~vlItGas~giG~~la~~l~-----~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~ 74 (248)
T PRK08251 1 TRQKILITGASSGLGAGMAREFA-----AKGRDLALCARRTDRLEELKAELLARYPGIKVA-VAALDVNDHDQVFEVFAE 74 (248)
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-----HcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEE-EEEcCCCCHHHHHHHHHH
Confidence 46889999999999999999999 68899999999864310 0134577 889999999988877765
Q ss_pred ccc---ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 79 ISQ---EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 79 ~~~---~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
+.. .+|++||+++.... .+...+++|+.+..++++++...+. ..+..+|+++||..
T Consensus 75 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~~~iv~~sS~~ 142 (248)
T PRK08251 75 FRDELGGLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFR-EQGSGHLVLISSVS 142 (248)
T ss_pred HHHHcCCCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-hcCCCeEEEEeccc
Confidence 421 38999999976322 2345678899988887777643210 01346788887743
|
|
| >PRK06701 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.2e-13 Score=114.65 Aligned_cols=162 Identities=10% Similarity=-0.069 Sum_probs=109.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC-C-------CCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-W-------FPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~-~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
+.|++|||||+|+||++++++|+ +.|++|+++.|+.... . ....++. ++.+|++|.+.+.+.++.+
T Consensus 45 ~~k~iLItGasggIG~~la~~l~-----~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~i 118 (290)
T PRK06701 45 KGKVALITGGDSGIGRAVAVLFA-----KEGADIAIVYLDEHEDANETKQRVEKEGVKCL-LIPGDVSDEAFCKDAVEET 118 (290)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEeCCcchHHHHHHHHHHhcCCeEE-EEEccCCCHHHHHHHHHHH
Confidence 35899999999999999999999 6899999998875421 0 0124577 8899999999887777654
Q ss_pred cc---ccceEEeecccCCc----------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccc
Q 028258 80 SQ---EITNLFWVPLQVQE----------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSL 146 (211)
Q Consensus 80 ~~---~~~~v~~~a~~~~~----------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~ 146 (211)
.. .+|++||+++.... .+...+++|+.++.++++++...+. .-.+++++||...|...
T Consensus 119 ~~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~---~~g~iV~isS~~~~~~~------ 189 (290)
T PRK06701 119 VRELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLK---QGSAIINTGSITGYEGN------ 189 (290)
T ss_pred HHHcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHh---hCCeEEEEecccccCCC------
Confidence 11 28999999976321 2345689999999999998876421 12478888887665321
Q ss_pred cCCCCCCCCCCcCCCCCCCCCCcchhHHHHHhh-----cCCCceEEEecCCceEecC
Q 028258 147 AGQLMPYEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 147 ~g~~~~~~~~~~e~~~~~~~~~~~~~~e~~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
+ ... .......+.+.+.+. ...+++++.+||+.++.+.
T Consensus 190 ---------~---~~~--~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~ 232 (290)
T PRK06701 190 ---------E---TLI--DYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPL 232 (290)
T ss_pred ---------C---Ccc--hhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCcc
Confidence 0 000 001111112222222 2368999999999998764
|
|
| >PRK12939 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=4.5e-14 Score=113.83 Aligned_cols=123 Identities=15% Similarity=0.017 Sum_probs=89.7
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
+.+|+++||||+|+||++++++|+ ++|++|++++|++.+.. ....+++ ++.+|++|++++.+.++.+
T Consensus 5 ~~~~~vlItGa~g~iG~~la~~l~-----~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~ 78 (250)
T PRK12939 5 LAGKRALVTGAARGLGAAFAEALA-----EAGATVAFNDGLAAEARELAAALEAAGGRAH-AIAADLADPASVQRFFDAA 78 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHH-----HcCCEEEEEeCCHHHHHHHHHHHHhcCCcEE-EEEccCCCHHHHHHHHHHH
Confidence 346899999999999999999999 68999999988765311 0124578 8999999999888877654
Q ss_pred cc---ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCee
Q 028258 80 SQ---EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKH 136 (211)
Q Consensus 80 ~~---~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~ 136 (211)
.. .+|+|||+++.... .+...+.+|..++.++++++...+. ..+..+|+++||...
T Consensus 79 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~g~iv~isS~~~ 146 (250)
T PRK12939 79 AAALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLR-DSGRGRIVNLASDTA 146 (250)
T ss_pred HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-HcCCeEEEEECchhh
Confidence 21 28999999986321 3345678899999888888765310 012347888877443
|
|
| >PRK12742 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=7.8e-14 Score=111.74 Aligned_cols=121 Identities=7% Similarity=-0.093 Sum_probs=87.1
Q ss_pred ccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC-CCC--CCCCCceeEEEeeCCCHHHHHHHHHhcc
Q 028258 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP-PGW--FPTALVDRYITFDALDPTDTALKLSLIS 80 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~-~~~--~~~~~~~~~i~~Dl~d~~~~~~~~~~~~ 80 (211)
|..+++|++|||||+|+||++++++|+ ++|++|+++.|+.. ... ....+++ ++.+|++|.+++.+.++...
T Consensus 1 m~~~~~k~vlItGasggIG~~~a~~l~-----~~G~~v~~~~~~~~~~~~~l~~~~~~~-~~~~D~~~~~~~~~~~~~~~ 74 (237)
T PRK12742 1 MGAFTGKKVLVLGGSRGIGAAIVRRFV-----TDGANVRFTYAGSKDAAERLAQETGAT-AVQTDSADRDAVIDVVRKSG 74 (237)
T ss_pred CCCCCCCEEEEECCCChHHHHHHHHHH-----HCCCEEEEecCCCHHHHHHHHHHhCCe-EEecCCCCHHHHHHHHHHhC
Confidence 334556899999999999999999999 68999988766432 110 0112467 88999999988888877654
Q ss_pred cccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 81 QEITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 81 ~~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
. +|++||+++... .++...+++|+.++.+++..+...+ ..-.+++++||.
T Consensus 75 ~-id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~g~iv~isS~ 133 (237)
T PRK12742 75 A-LDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQM---PEGGRIIIIGSV 133 (237)
T ss_pred C-CcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHH---hcCCeEEEEecc
Confidence 3 899999997632 1345678999999888876665542 122477777764
|
|
| >PRK08085 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=7.3e-14 Score=113.31 Aligned_cols=172 Identities=11% Similarity=0.000 Sum_probs=112.0
Q ss_pred CccccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHH
Q 028258 1 MEKQDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTA 73 (211)
Q Consensus 1 ~~~~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~ 73 (211)
|+.+....+|++|||||+|+||++++++|+ ++|++|++++|++.+.. .....+. ++.+|++|++++.
T Consensus 1 ~~~~~~l~~k~~lItGas~giG~~ia~~L~-----~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~-~~~~Dl~~~~~~~ 74 (254)
T PRK08085 1 MNDLFSLAGKNILITGSAQGIGFLLATGLA-----EYGAEIIINDITAERAELAVAKLRQEGIKAH-AAPFNVTHKQEVE 74 (254)
T ss_pred CcccccCCCCEEEEECCCChHHHHHHHHHH-----HcCCEEEEEcCCHHHHHHHHHHHHhcCCeEE-EEecCCCCHHHHH
Confidence 445444457899999999999999999999 68999999999764311 0123567 7899999999887
Q ss_pred HHHHhccc---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeeccc
Q 028258 74 LKLSLISQ---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPI 141 (211)
Q Consensus 74 ~~~~~~~~---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~ 141 (211)
+.++.+.. .+|.++|+++... .++...+++|+.++..+++++...+. ..+..+|+++||.....+
T Consensus 75 ~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~iv~isS~~~~~~-- 151 (254)
T PRK08085 75 AAIEHIEKDIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMV-KRQAGKIINICSMQSELG-- 151 (254)
T ss_pred HHHHHHHHhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-HcCCcEEEEEccchhccC--
Confidence 77765421 3899999997632 14556789999998888887765321 012357888877432110
Q ss_pred CCccccCCCCCCCCCCcCCCCCCCCCCcchhHHHHHhh-----cCCCceEEEecCCceEecCC
Q 028258 142 FDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 142 ~~~~~~g~~~~~~~~~~e~~~~~~~~~~~~~~e~~l~~-----~~~~~~~~i~Rp~~i~G~~~ 199 (211)
... .+ .....+...+.+.+. ...++.+..++|+.+..+..
T Consensus 152 ---------------~~~-~~--~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~ 196 (254)
T PRK08085 152 ---------------RDT-IT--PYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMT 196 (254)
T ss_pred ---------------CCC-Cc--chHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcch
Confidence 000 00 000111222222222 34689999999999988743
|
|
| >PLN02253 xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Probab=99.56 E-value=9.6e-14 Score=114.22 Aligned_cols=121 Identities=12% Similarity=-0.055 Sum_probs=87.2
Q ss_pred CCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC------CCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 6 QNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW------FPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 6 ~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
.+++|++|||||+|+||++++++|+ +.|++|++++|+..... ....+++ ++.+|++|++++.++++.+
T Consensus 15 ~l~~k~~lItGas~gIG~~la~~l~-----~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~~~~~~~~~ 88 (280)
T PLN02253 15 RLLGKVALVTGGATGIGESIVRLFH-----KHGAKVCIVDLQDDLGQNVCDSLGGEPNVC-FFHCDVTVEDDVSRAVDFT 88 (280)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHH-----HcCCEEEEEeCCHHHHHHHHHHhcCCCceE-EEEeecCCHHHHHHHHHHH
Confidence 3356899999999999999999999 68999999998654210 1124678 9999999999888777654
Q ss_pred cc---ccceEEeecccCC-----------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeec
Q 028258 80 SQ---EITNLFWVPLQVQ-----------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTG 133 (211)
Q Consensus 80 ~~---~~~~v~~~a~~~~-----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~ 133 (211)
.. .+|++||+|+... .++...+++|+.++.++++++...+... +-.++++++|
T Consensus 89 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~ii~isS 155 (280)
T PLN02253 89 VDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPL-KKGSIVSLCS 155 (280)
T ss_pred HHHhCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc-CCceEEEecC
Confidence 21 2899999997632 1345678999999988888776432001 1235666655
|
|
| >PRK06198 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=5.9e-14 Score=114.07 Aligned_cols=169 Identities=12% Similarity=0.018 Sum_probs=111.0
Q ss_pred ccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcE-EEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHH
Q 028258 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWK-VYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALK 75 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~-V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~ 75 (211)
|.+++.|+++||||+|+||++++++|+ +.|++ |++++|++.... .....+. ++.+|+++++++.+.
T Consensus 1 ~~~~~~k~vlItGa~g~iG~~la~~l~-----~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~-~~~~D~~~~~~~~~~ 74 (260)
T PRK06198 1 MGRLDGKVALVTGGTQGLGAAIARAFA-----ERGAAGLVICGRNAEKGEAQAAELEALGAKAV-FVQADLSDVEDCRRV 74 (260)
T ss_pred CCCCCCcEEEEeCCCchHHHHHHHHHH-----HCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEE-EEEccCCCHHHHHHH
Confidence 455667999999999999999999999 68999 999998754311 0123567 889999999988887
Q ss_pred HHhccc---ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCC
Q 028258 76 LSLISQ---EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFD 143 (211)
Q Consensus 76 ~~~~~~---~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~ 143 (211)
++.+.. .+|.+||+++.... .+...+++|+.++.++++++...+.......+++++||...+++.
T Consensus 75 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~--- 151 (260)
T PRK06198 75 VAAADEAFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQ--- 151 (260)
T ss_pred HHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCC---
Confidence 765421 28999999986321 234567899999888888776532101112467888776554321
Q ss_pred ccccCCCCCCCCCCcCCCCCCCCCCcchhHHHHHhh-----cCCCceEEEecCCceEecC
Q 028258 144 PSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 144 ~~~~g~~~~~~~~~~e~~~~~~~~~~~~~~e~~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
+ . .. .........+.+... ...++.++.++|+.+.++.
T Consensus 152 ------------~--~-~~--~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~ 194 (260)
T PRK06198 152 ------------P--F-LA--AYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEG 194 (260)
T ss_pred ------------C--C-cc--hhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcc
Confidence 0 0 00 000111122222221 3467999999999998874
|
|
| >PRK08063 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=5.3e-14 Score=113.61 Aligned_cols=164 Identities=10% Similarity=-0.029 Sum_probs=106.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEE-EeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYG-AARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~-~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
.++++|||||+|+||++++++|+ +.|++|++ ..|+..+.. ....++. ++.+|++|++++..+++.+
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~-----~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~ 76 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLA-----EEGYDIAVNYARSRKAAEETAEEIEALGRKAL-AVKANVGDVEKIKEMFAQI 76 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHH-----HCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEE-EEEcCCCCHHHHHHHHHHH
Confidence 34799999999999999999999 68999876 466543210 0134577 8999999999888887765
Q ss_pred cc---ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCcccc
Q 028258 80 SQ---EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLA 147 (211)
Q Consensus 80 ~~---~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~ 147 (211)
.. .+|+|||+++.... .+...+.+|..++.++++++...+. ..+.++|+++||...+..
T Consensus 77 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~g~iv~~sS~~~~~~-------- 147 (250)
T PRK08063 77 DEEFGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLME-KVGGGKIISLSSLGSIRY-------- 147 (250)
T ss_pred HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-hcCCeEEEEEcchhhccC--------
Confidence 21 28999999975321 2233567899998888888876421 113468888887533210
Q ss_pred CCCCCCCCCCcCCCCCCCCCCcchhHHHHHhh-----cCCCceEEEecCCceEecC
Q 028258 148 GQLMPYEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 148 g~~~~~~~~~~e~~~~~~~~~~~~~~e~~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
... .+ .....+...+.+... ...+++++.++|+.+..+.
T Consensus 148 ---------~~~-~~--~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~ 191 (250)
T PRK08063 148 ---------LEN-YT--TVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDA 191 (250)
T ss_pred ---------CCC-cc--HHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCch
Confidence 000 00 000111222222222 2468999999999998664
|
|
| >PRK07478 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=1e-13 Score=112.47 Aligned_cols=123 Identities=15% Similarity=-0.036 Sum_probs=87.1
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
.++|+++||||+|+||++++++|+ +.|++|++++|++.+.. ....++. ++.+|++|++++.+.++.+
T Consensus 4 ~~~k~~lItGas~giG~~ia~~l~-----~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~ 77 (254)
T PRK07478 4 LNGKVAIITGASSGIGRAAAKLFA-----REGAKVVVGARRQAELDQLVAEIRAEGGEAV-ALAGDVRDEAYAKALVALA 77 (254)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEE-EEEcCCCCHHHHHHHHHHH
Confidence 346899999999999999999999 68999999999765311 0124577 8899999999887777654
Q ss_pred cc---ccceEEeecccCC---c-------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCee
Q 028258 80 SQ---EITNLFWVPLQVQ---E-------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKH 136 (211)
Q Consensus 80 ~~---~~~~v~~~a~~~~---~-------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~ 136 (211)
.. .+|++||+++... . ++...+++|+.+...+.+++...+... +..+++++||...
T Consensus 78 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~-~~~~iv~~sS~~~ 146 (254)
T PRK07478 78 VERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLAR-GGGSLIFTSTFVG 146 (254)
T ss_pred HHhcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCceEEEEechHh
Confidence 21 3899999998632 1 345567899987766655544321001 2356888877543
|
|
| >PRK07102 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=7e-14 Score=112.67 Aligned_cols=118 Identities=17% Similarity=0.057 Sum_probs=87.7
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC--------CCCCCceeEEEeeCCCHHHHHHHHHhccc
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW--------FPTALVDRYITFDALDPTDTALKLSLISQ 81 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~--------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~ 81 (211)
|+++||||||+||++++++|+ ++|++|++++|+++... ....+++ ++.+|++|++++.+.++.+..
T Consensus 2 ~~vlItGas~giG~~~a~~l~-----~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~ 75 (243)
T PRK07102 2 KKILIIGATSDIARACARRYA-----AAGARLYLAARDVERLERLADDLRARGAVAVS-THELDILDTASHAAFLDSLPA 75 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHH-----hcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEE-EEecCCCChHHHHHHHHHHhh
Confidence 689999999999999999999 68999999999865321 0134688 999999999998888876543
Q ss_pred ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 82 EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 82 ~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
.+|.++|+++.... ++.+.+++|+.++.++++++...+... +..+++++||.
T Consensus 76 ~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~~sS~ 136 (243)
T PRK07102 76 LPDIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEAR-GSGTIVGISSV 136 (243)
T ss_pred cCCEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC-CCCEEEEEecc
Confidence 37899998875321 223457889999888888776532101 34677887764
|
|
| >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=7.5e-14 Score=113.36 Aligned_cols=125 Identities=14% Similarity=0.064 Sum_probs=89.7
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----CCCCCceeEEEeeCCCHHHHHHHHHhcc-
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----FPTALVDRYITFDALDPTDTALKLSLIS- 80 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~~~~- 80 (211)
+.+|++|||||+|+||++++++|+ +.|++|++++|+..... ....++. ++.+|++|++++.++++.+.
T Consensus 6 l~~k~~lItGas~gIG~aia~~l~-----~~G~~vv~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~ 79 (251)
T PRK12481 6 LNGKVAIITGCNTGLGQGMAIGLA-----KAGADIVGVGVAEAPETQAQVEALGRKFH-FITADLIQQKDIDSIVSQAVE 79 (251)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHH-----HCCCEEEEecCchHHHHHHHHHHcCCeEE-EEEeCCCCHHHHHHHHHHHHH
Confidence 456899999999999999999999 79999999888643210 1134577 89999999998888776542
Q ss_pred --cccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeee
Q 028258 81 --QEITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 137 (211)
Q Consensus 81 --~~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y 137 (211)
..+|++||+++... .++...+++|+.++..+.+++...+.....-.+++++||...+
T Consensus 80 ~~g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~ 147 (251)
T PRK12481 80 VMGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSF 147 (251)
T ss_pred HcCCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhc
Confidence 13899999998632 1455678899998887777765432101112478888775444
|
|
| >PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.56 E-value=8.8e-14 Score=111.69 Aligned_cols=120 Identities=15% Similarity=0.038 Sum_probs=87.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC--------CCCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG--------WFPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~--------~~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
.+|++|||||||+||+++++.|+ ++|++|+++.|++... ......+. ++.+|++|++++.++++.+
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~-----~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~ 77 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLA-----AQGANVVINYASSEAGAEALVAEIGALGGKAL-AVQGDVSDAESVERAVDEA 77 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHH-----HCCCEEEEEeCCchhHHHHHHHHHHhcCCceE-EEEcCCCCHHHHHHHHHHH
Confidence 35789999999999999999999 6899998888875521 01235677 8899999999888877654
Q ss_pred cc---ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 80 SQ---EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 80 ~~---~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
.. .+|+|||+++.... .+...+.+|+.++.++++++...+. ..+.++|+++||.
T Consensus 78 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~~v~iss~ 143 (248)
T PRK05557 78 KAEFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMM-KQRSGRIINISSV 143 (248)
T ss_pred HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-hcCCeEEEEEccc
Confidence 21 27999999976331 2344578899998888888875411 1134578888764
|
|
| >PRK12743 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=9.3e-14 Score=112.94 Aligned_cols=162 Identities=12% Similarity=0.008 Sum_probs=107.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC-C-------CCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-W-------FPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~-~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
|+|++|||||||+||++++++|+ +.|++|+++.|+.... . ....+++ ++.+|++|++++..+++.+
T Consensus 1 ~~k~vlItGas~giG~~~a~~l~-----~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~ 74 (256)
T PRK12743 1 MAQVAIVTASDSGIGKACALLLA-----QQGFDIGITWHSDEEGAKETAEEVRSHGVRAE-IRQLDLSDLPEGAQALDKL 74 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHH-----HCCCEEEEEeCCChHHHHHHHHHHHhcCCceE-EEEccCCCHHHHHHHHHHH
Confidence 46899999999999999999999 6899998887654321 0 1134678 8999999998877766654
Q ss_pred cc---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCcccc
Q 028258 80 SQ---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLA 147 (211)
Q Consensus 80 ~~---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~ 147 (211)
.. .+|++||+++... .++...+.+|+.+..++++++...+.....-.+|+++||....
T Consensus 75 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~---------- 144 (256)
T PRK12743 75 IQRLGRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEH---------- 144 (256)
T ss_pred HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeecccc----------
Confidence 21 3899999997632 1345567899999999988776542001112478887764211
Q ss_pred CCCCCCCCCCcCCCCCCCCCCcch----hHHHHHhh-----cCCCceEEEecCCceEecCC
Q 028258 148 GQLMPYEVPFKEDSSRLPFPNFYY----ELEDVSAS-----YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 148 g~~~~~~~~~~e~~~~~~~~~~~~----~~e~~l~~-----~~~~~~~~i~Rp~~i~G~~~ 199 (211)
.+.. ....|. ..+.+.+. ...++.++.++|+.+..+..
T Consensus 145 -------~~~~-------~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~ 191 (256)
T PRK12743 145 -------TPLP-------GASAYTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPMN 191 (256)
T ss_pred -------CCCC-------CcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCccc
Confidence 0100 011222 22222222 34689999999999988743
|
|
| >PRK05854 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.9e-13 Score=114.64 Aligned_cols=126 Identities=16% Similarity=0.054 Sum_probs=90.5
Q ss_pred ccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC---------CCCCCceeEEEeeCCCHHHHHH
Q 028258 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW---------FPTALVDRYITFDALDPTDTAL 74 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~---------~~~~~~~~~i~~Dl~d~~~~~~ 74 (211)
|..+++|+++||||||+||.+++++|+ +.|++|+++.|+..+.. .....++ ++.+|++|.+++.+
T Consensus 9 ~~~l~gk~~lITGas~GIG~~~a~~La-----~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~-~~~~Dl~d~~sv~~ 82 (313)
T PRK05854 9 VPDLSGKRAVVTGASDGLGLGLARRLA-----AAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLS-LRALDLSSLASVAA 82 (313)
T ss_pred CcccCCCEEEEeCCCChHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceE-EEEecCCCHHHHHH
Confidence 344567999999999999999999999 68999999999765311 0123578 89999999998887
Q ss_pred HHHhcc---cccceEEeecccCC--------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeee
Q 028258 75 KLSLIS---QEITNLFWVPLQVQ--------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 137 (211)
Q Consensus 75 ~~~~~~---~~~~~v~~~a~~~~--------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y 137 (211)
+++.+. ..+|++||+|+... ..++..+.+|+.+...+.+.+...+... -.+++++||...+
T Consensus 83 ~~~~~~~~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~--~~riv~vsS~~~~ 154 (313)
T PRK05854 83 LGEQLRAEGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG--RARVTSQSSIAAR 154 (313)
T ss_pred HHHHHHHhCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC--CCCeEEEechhhc
Confidence 776542 13899999998632 1344567899998777777665432111 2467777776544
|
|
| >PRK08213 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.8e-13 Score=111.25 Aligned_cols=123 Identities=16% Similarity=0.013 Sum_probs=90.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHhcc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSLIS 80 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~ 80 (211)
++|++|||||+|+||++++++|+ +.|++|++++|+..+.. .....+. ++.+|++|++++.+.++.+.
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~-----~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~-~~~~Dl~d~~~i~~~~~~~~ 84 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALG-----EAGARVVLSARKAEELEEAAAHLEALGIDAL-WIAADVADEADIERLAEETL 84 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHH-----HcCCEEEEEeCCHHHHHHHHHHHHhcCCeEE-EEEccCCCHHHHHHHHHHHH
Confidence 46899999999999999999999 68999999999754311 1124577 89999999998876665431
Q ss_pred c---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhc-CCCCCCceEEEEeecCeee
Q 028258 81 Q---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSS-NSGRSRLRHVALLTGTKHY 137 (211)
Q Consensus 81 ~---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~~~~~~~s~~~~y 137 (211)
. .+|.|||+++... ..+...+++|+.++.++++++... +. ..+..+|+++||...+
T Consensus 85 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~-~~~~~~~v~~sS~~~~ 153 (259)
T PRK08213 85 ERFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMI-PRGYGRIINVASVAGL 153 (259)
T ss_pred HHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHH-hcCCeEEEEECChhhc
Confidence 1 2899999997632 134456789999999999977543 11 1134678888875444
|
|
| >PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=9.2e-14 Score=111.41 Aligned_cols=119 Identities=13% Similarity=-0.003 Sum_probs=84.7
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC------CCCCCceeEEEeeCCCHHHHHHHHHhcc
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW------FPTALVDRYITFDALDPTDTALKLSLIS 80 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~ 80 (211)
.++|++|||||+|+||+++++.|+ +.|++|++++|++.... ....+++ ++.+|++|++++.+.+++..
T Consensus 3 ~~~~~vlItGa~g~iG~~~a~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~ 76 (238)
T PRK05786 3 LKGKKVAIIGVSEGLGYAVAYFAL-----KEGAQVCINSRNENKLKRMKKTLSKYGNIH-YVVGDVSSTESARNVIEKAA 76 (238)
T ss_pred cCCcEEEEECCCchHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCeE-EEECCCCCHHHHHHHHHHHH
Confidence 346899999999999999999999 68999999999765321 0123578 89999999998887776543
Q ss_pred c---ccceEEeecccCCc-------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 81 Q---EITNLFWVPLQVQE-------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 81 ~---~~~~v~~~a~~~~~-------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
. .+|.++++++.... .....+++|+.+..++++.+...+. .-.+++++|+.
T Consensus 77 ~~~~~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~---~~~~iv~~ss~ 137 (238)
T PRK05786 77 KVLNAIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLK---EGSSIVLVSSM 137 (238)
T ss_pred HHhCCCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHh---cCCEEEEEecc
Confidence 2 26888888865321 2234567888887777777765421 12456666653
|
|
| >PRK06181 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.1e-13 Score=112.73 Aligned_cols=120 Identities=13% Similarity=-0.046 Sum_probs=87.9
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHhccc-
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSLISQ- 81 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~- 81 (211)
+++|||||+|+||+++++.|+ +.|++|++++|++.... ....++. ++.+|++|++++..+++.+..
T Consensus 2 ~~vlVtGasg~iG~~la~~l~-----~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~~ 75 (263)
T PRK06181 2 KVVIITGASEGIGRALAVRLA-----RAGAQLVLAARNETRLASLAQELADHGGEAL-VVPTDVSDAEACERLIEAAVAR 75 (263)
T ss_pred CEEEEecCCcHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEE-EEEccCCCHHHHHHHHHHHHHH
Confidence 679999999999999999999 68999999999754311 1134677 889999999988887775421
Q ss_pred --ccceEEeecccCCc----------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeee
Q 028258 82 --EITNLFWVPLQVQE----------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 137 (211)
Q Consensus 82 --~~~~v~~~a~~~~~----------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y 137 (211)
.+|.|||+++.... .+.+.+++|+.++.++++.+...+ .....+++++||...|
T Consensus 76 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~--~~~~~~iv~~sS~~~~ 141 (263)
T PRK06181 76 FGGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHL--KASRGQIVVVSSLAGL 141 (263)
T ss_pred cCCCCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHH--HhcCCEEEEEeccccc
Confidence 28999999976331 123457899999999988876431 0123567777775544
|
|
| >PRK05866 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.8e-13 Score=113.75 Aligned_cols=122 Identities=14% Similarity=-0.013 Sum_probs=86.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHhcc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSLIS 80 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~ 80 (211)
.+++++||||||+||++++++|+ ++|++|++++|+.+... .....+. ++.+|++|.+++.+.++.+.
T Consensus 39 ~~k~vlItGasggIG~~la~~La-----~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~-~~~~Dl~d~~~v~~~~~~~~ 112 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFA-----RRGATVVAVARREDLLDAVADRITRAGGDAM-AVPCDLSDLDAVDALVADVE 112 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHHHhcCCcEE-EEEccCCCHHHHHHHHHHHH
Confidence 45889999999999999999999 68999999999864311 0123567 88999999998888776431
Q ss_pred c---ccceEEeecccCCc-----------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCee
Q 028258 81 Q---EITNLFWVPLQVQE-----------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKH 136 (211)
Q Consensus 81 ~---~~~~v~~~a~~~~~-----------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~ 136 (211)
. .+|++||+|+.... .....+++|..+..++++++...+... +..+++++||...
T Consensus 113 ~~~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv~isS~~~ 181 (293)
T PRK05866 113 KRIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLER-GDGHIINVATWGV 181 (293)
T ss_pred HHcCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcEEEEECChhh
Confidence 1 38999999976421 123467889888777777654321001 3467888877543
|
|
| >PRK06949 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.1e-13 Score=112.17 Aligned_cols=164 Identities=13% Similarity=0.011 Sum_probs=108.3
Q ss_pred CCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 6 QNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 6 ~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
.++.|+++||||+|+||++++++|+ ..|++|+++.|++.... ....+++ ++.+|+++++++.+.++.
T Consensus 6 ~~~~k~ilItGasg~IG~~~a~~l~-----~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~-~~~~D~~~~~~~~~~~~~ 79 (258)
T PRK06949 6 NLEGKVALVTGASSGLGARFAQVLA-----QAGAKVVLASRRVERLKELRAEIEAEGGAAH-VVSLDVTDYQSIKAAVAH 79 (258)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEE-EEEecCCCHHHHHHHHHH
Confidence 4457999999999999999999999 68999999999765311 0124678 899999999888777765
Q ss_pred cc---cccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCC-CC------CceEEEEeecCeeeec
Q 028258 79 IS---QEITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSG-RS------RLRHVALLTGTKHYMG 139 (211)
Q Consensus 79 ~~---~~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~------~~~~~~~~s~~~~y~~ 139 (211)
+. ..+|++||+++... .++...+++|+.++.++.+++...+.. .. ...+++++||...+..
T Consensus 80 ~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~ 159 (258)
T PRK06949 80 AETEAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRV 159 (258)
T ss_pred HHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCC
Confidence 42 12799999998532 134556788998888888776532100 00 1246777766433210
Q ss_pred ccCCccccCCCCCCCCCCcCCCCCCCCCCcc----hhHHHHHhh-----cCCCceEEEecCCceEecCC
Q 028258 140 PIFDPSLAGQLMPYEVPFKEDSSRLPFPNFY----YELEDVSAS-----YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 140 ~~~~~~~~g~~~~~~~~~~e~~~~~~~~~~~----~~~e~~l~~-----~~~~~~~~i~Rp~~i~G~~~ 199 (211)
. +....| ...+.+... ...+++++++||+.++++..
T Consensus 160 -----------------~-------~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~ 204 (258)
T PRK06949 160 -----------------L-------PQIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEIN 204 (258)
T ss_pred -----------------C-------CCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcc
Confidence 0 001112 112222211 23689999999999998754
|
|
| >PRK07074 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.4e-13 Score=111.82 Aligned_cols=163 Identities=13% Similarity=0.027 Sum_probs=106.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----CCCCCceeEEEeeCCCHHHHHHHHHhcc--
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----FPTALVDRYITFDALDPTDTALKLSLIS-- 80 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~~~~-- 80 (211)
|.|++|||||||+||++++++|+ ++|++|++++|++.... .....++ ++.+|+.|++++...++.+.
T Consensus 1 ~~k~ilItGat~~iG~~la~~L~-----~~g~~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~ 74 (257)
T PRK07074 1 TKRTALVTGAAGGIGQALARRFL-----AAGDRVLALDIDAAALAAFADALGDARFV-PVACDLTDAASLAAALANAAAE 74 (257)
T ss_pred CCCEEEEECCcchHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHhcCCceE-EEEecCCCHHHHHHHHHHHHHH
Confidence 35789999999999999999999 68999999999765311 1224678 89999999998877776541
Q ss_pred -cccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCC
Q 028258 81 -QEITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQL 150 (211)
Q Consensus 81 -~~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~ 150 (211)
..+|+++|+++.... .+...+.+|..++.++++++...+. ..+..+|+++||...+.. ++
T Consensus 75 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~~~iv~~sS~~~~~~-------~~-- 144 (257)
T PRK07074 75 RGPVDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGML-KRSRGAVVNIGSVNGMAA-------LG-- 144 (257)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-HcCCeEEEEEcchhhcCC-------CC--
Confidence 127999999976421 1233457898888888887743210 013457888877432210 00
Q ss_pred CCCCCCCcCCCCCCCCCCcchhHHHHHhh-----cCCCceEEEecCCceEecC
Q 028258 151 MPYEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 151 ~~~~~~~~e~~~~~~~~~~~~~~e~~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
.+ .........+.+... ...++++..+||+.+.++.
T Consensus 145 ----------~~--~y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~ 185 (257)
T PRK07074 145 ----------HP--AYSAAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQA 185 (257)
T ss_pred ----------Cc--ccHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcch
Confidence 11 001111222222222 2358999999999998874
|
|
| >PRK06947 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.1e-13 Score=111.74 Aligned_cols=122 Identities=13% Similarity=-0.015 Sum_probs=82.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCC-CCCC-------CCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP-PPGW-------FPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~-~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
|+|++|||||+|+||+++++.|+ +.|++|+++.++. .... ....++. ++.+|++|++++.++++.+
T Consensus 1 m~k~ilItGas~giG~~la~~l~-----~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~ 74 (248)
T PRK06947 1 MRKVVLITGASRGIGRATAVLAA-----ARGWSVGINYARDAAAAEETADAVRAAGGRAC-VVAGDVANEADVIAMFDAV 74 (248)
T ss_pred CCcEEEEeCCCCcHHHHHHHHHH-----HCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEE-EEEeccCCHHHHHHHHHHH
Confidence 45799999999999999999999 6899988765443 2210 0124678 9999999998887777654
Q ss_pred c---cccceEEeecccCCc----------hhHHHHhhcHHHHHHHHHHHHhcCCCCC--CceEEEEeecCe
Q 028258 80 S---QEITNLFWVPLQVQE----------SEEVNIFKNSTMLKNVLSVLVSSNSGRS--RLRHVALLTGTK 135 (211)
Q Consensus 80 ~---~~~~~v~~~a~~~~~----------~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~~~~~~~~s~~~ 135 (211)
. ..+|++||+++.... ++...+.+|+.++..+++.+...+.... .-.+|+++||..
T Consensus 75 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~ 145 (248)
T PRK06947 75 QSAFGRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIA 145 (248)
T ss_pred HHhcCCCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchh
Confidence 2 138999999975321 2344578899988777755443210000 013577777643
|
|
| >PRK12824 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=2.4e-13 Score=109.27 Aligned_cols=123 Identities=18% Similarity=0.173 Sum_probs=87.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC---C-----CCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG---W-----FPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~---~-----~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
|+|+++||||+|+||++++++|+ +.|++|++++|++... . .....+. ++.+|++|.+.+.+.++.+
T Consensus 1 ~~k~vlItG~s~~iG~~la~~l~-----~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~v~~~~~~~ 74 (245)
T PRK12824 1 MKKIALVTGAKRGIGSAIARELL-----NDGYRVIATYFSGNDCAKDWFEEYGFTEDQVR-LKELDVTDTEECAEALAEI 74 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHH-----HcCCEEEEEeCCcHHHHHHHHHHhhccCCeEE-EEEcCCCCHHHHHHHHHHH
Confidence 35789999999999999999999 6899999999874310 0 1124578 8999999999888877664
Q ss_pred cc---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeee
Q 028258 80 SQ---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 137 (211)
Q Consensus 80 ~~---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y 137 (211)
.. .+|++||+++... ..+...+++|+.++.++.+++...+. ..+..+|+++||...+
T Consensus 75 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~iv~iss~~~~ 143 (245)
T PRK12824 75 EEEEGPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMC-EQGYGRIINISSVNGL 143 (245)
T ss_pred HHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-HhCCeEEEEECChhhc
Confidence 21 3899999997632 13455678999988887555432210 0135688888875443
|
|
| >PRK07063 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.3e-13 Score=112.23 Aligned_cols=122 Identities=16% Similarity=0.007 Sum_probs=89.5
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----C----CCCCceeEEEeeCCCHHHHHHHHH
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----F----PTALVDRYITFDALDPTDTALKLS 77 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----~----~~~~~~~~i~~Dl~d~~~~~~~~~ 77 (211)
..+|+++||||+|+||++++++|+ ++|++|++++|+++... . ...++. ++.+|++|++++..+++
T Consensus 5 l~~k~vlVtGas~gIG~~~a~~l~-----~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~ 78 (260)
T PRK07063 5 LAGKVALVTGAAQGIGAAIARAFA-----REGAAVALADLDAALAERAAAAIARDVAGARVL-AVPADVTDAASVAAAVA 78 (260)
T ss_pred cCCCEEEEECCCchHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhccCCceEE-EEEccCCCHHHHHHHHH
Confidence 346899999999999999999999 68999999999765311 0 124577 88999999988887776
Q ss_pred hccc---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 78 LISQ---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 78 ~~~~---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
.+.. .+|++||+++... .++...+++|+.++.++++++...+... +..+|+++||..
T Consensus 79 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~isS~~ 147 (260)
T PRK07063 79 AAEEAFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVER-GRGSIVNIASTH 147 (260)
T ss_pred HHHHHhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhh-CCeEEEEECChh
Confidence 5421 3899999998532 1455667899999888888776432101 235788887753
|
|
| >PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.5e-13 Score=110.37 Aligned_cols=124 Identities=15% Similarity=-0.019 Sum_probs=88.5
Q ss_pred ccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC----CCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW----FPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~----~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
|.+++++++|||||+|+||++++++|+ ++|+.|+...|+..+.. ....+++ ++.+|++|.+++.+.++.+
T Consensus 1 ~~~~~~~~vlItGa~g~iG~~la~~l~-----~~g~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~ 74 (245)
T PRK12936 1 MFDLSGRKALVTGASGGIGEEIARLLH-----AQGAIVGLHGTRVEKLEALAAELGERVK-IFPANLSDRDEVKALGQKA 74 (245)
T ss_pred CcCCCCCEEEEECCCChHHHHHHHHHH-----HCCCEEEEEcCCHHHHHHHHHHhCCceE-EEEccCCCHHHHHHHHHHH
Confidence 344456899999999999999999999 68999888887654311 0124577 8899999999887776543
Q ss_pred c---cccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 80 S---QEITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 80 ~---~~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
. ..+|.+||+++... .++...+++|+.++.++++++...+. ..+..+|+++||.
T Consensus 75 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~iv~~sS~ 140 (245)
T PRK12936 75 EADLEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMM-RRRYGRIINITSV 140 (245)
T ss_pred HHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHH-HhCCCEEEEECCH
Confidence 2 13899999998632 13455678999998888777643210 0134578888774
|
|
| >PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA | Back alignment and domain information |
|---|
Probab=99.54 E-value=8.3e-15 Score=117.64 Aligned_cols=143 Identities=22% Similarity=0.305 Sum_probs=95.9
Q ss_pred EEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC---CCCCCceeEEEeeCCCHHHHHHHHHhcccccceEEe
Q 028258 12 ALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW---FPTALVDRYITFDALDPTDTALKLSLISQEITNLFW 88 (211)
Q Consensus 12 ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~---~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~~ 88 (211)
|+|+||||.+|+++++.|+ ..+++|+++.|++.+.. +...+++ ++.+|+.|++++.++|++ +|.||.
T Consensus 1 I~V~GatG~~G~~v~~~L~-----~~~~~V~~l~R~~~~~~~~~l~~~g~~-vv~~d~~~~~~l~~al~g----~d~v~~ 70 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALL-----SAGFSVRALVRDPSSDRAQQLQALGAE-VVEADYDDPESLVAALKG----VDAVFS 70 (233)
T ss_dssp EEEETTTSHHHHHHHHHHH-----HTTGCEEEEESSSHHHHHHHHHHTTTE-EEES-TT-HHHHHHHHTT----CSEEEE
T ss_pred CEEECCccHHHHHHHHHHH-----hCCCCcEEEEeccchhhhhhhhcccce-EeecccCCHHHHHHHHcC----CceEEe
Confidence 7999999999999999999 68899999999875311 1346788 999999999999999998 466776
Q ss_pred ecccCCchhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCCCCCC-CC
Q 028258 89 VPLQVQESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLP-FP 167 (211)
Q Consensus 89 ~a~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~~~~~-~~ 167 (211)
+........ .....+++++++++ ++++|++.|-...+ ++.....+ .+
T Consensus 71 ~~~~~~~~~-------~~~~~~li~Aa~~a-----gVk~~v~ss~~~~~--------------------~~~~~~~p~~~ 118 (233)
T PF05368_consen 71 VTPPSHPSE-------LEQQKNLIDAAKAA-----GVKHFVPSSFGADY--------------------DESSGSEPEIP 118 (233)
T ss_dssp ESSCSCCCH-------HHHHHHHHHHHHHH-----T-SEEEESEESSGT--------------------TTTTTSTTHHH
T ss_pred ecCcchhhh-------hhhhhhHHHhhhcc-----ccceEEEEEecccc--------------------cccccccccch
Confidence 665442211 22346899999988 69999875432111 11111111 11
Q ss_pred C--cchhHHHHHhhcCCCceEEEecCCceEecC
Q 028258 168 N--FYYELEDVSASYSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 168 ~--~~~~~e~~l~~~~~~~~~~i~Rp~~i~G~~ 198 (211)
. .....|+.+++ .+++|+++||+..+..-
T Consensus 119 ~~~~k~~ie~~l~~--~~i~~t~i~~g~f~e~~ 149 (233)
T PF05368_consen 119 HFDQKAEIEEYLRE--SGIPYTIIRPGFFMENL 149 (233)
T ss_dssp HHHHHHHHHHHHHH--CTSEBEEEEE-EEHHHH
T ss_pred hhhhhhhhhhhhhh--ccccceeccccchhhhh
Confidence 1 12334666654 69999999999877653
|
NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B .... |
| >PRK08226 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=2.6e-13 Score=110.49 Aligned_cols=123 Identities=14% Similarity=0.051 Sum_probs=88.2
Q ss_pred cCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC------CCCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 5 DQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW------FPTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 5 ~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
..+++|+++||||+|+||++++++|+ ++|++|++++|+..... .....+. ++.+|+++++++...++.
T Consensus 2 ~~~~~~~~lItG~s~giG~~la~~l~-----~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~v~~~~~~ 75 (263)
T PRK08226 2 GKLTGKTALITGALQGIGEGIARVFA-----RHGANLILLDISPEIEKLADELCGRGHRCT-AVVADVRDPASVAAAIKR 75 (263)
T ss_pred CCCCCCEEEEeCCCChHHHHHHHHHH-----HCCCEEEEecCCHHHHHHHHHHHHhCCceE-EEECCCCCHHHHHHHHHH
Confidence 34456899999999999999999999 68999999998753110 0124577 889999999888777765
Q ss_pred ccc---ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 79 ISQ---EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 79 ~~~---~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
+.. .+|.+||+++.... .+.+.+++|+.++.++++++...+. ..+..+|+++||.
T Consensus 76 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~~~iv~isS~ 142 (263)
T PRK08226 76 AKEKEGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMI-ARKDGRIVMMSSV 142 (263)
T ss_pred HHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHH-hcCCcEEEEECcH
Confidence 421 38999999986321 2334678999999888887764310 0123567777664
|
|
| >PRK08278 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=4.1e-13 Score=110.38 Aligned_cols=108 Identities=13% Similarity=-0.053 Sum_probs=82.5
Q ss_pred cCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC--------------CCCCCceeEEEeeCCCHH
Q 028258 5 DQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW--------------FPTALVDRYITFDALDPT 70 (211)
Q Consensus 5 ~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~--------------~~~~~~~~~i~~Dl~d~~ 70 (211)
+.+++|+++||||+|+||++++++|+ +.|++|++++|+..... ....++. ++.+|+++++
T Consensus 2 ~~~~~k~vlItGas~gIG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~D~~~~~ 75 (273)
T PRK08278 2 MSLSGKTLFITGASRGIGLAIALRAA-----RDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQAL-PLVGDVRDED 75 (273)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHH-----HCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceE-EEEecCCCHH
Confidence 33456899999999999999999999 68999999999754210 0123577 8899999999
Q ss_pred HHHHHHHhcc---cccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhc
Q 028258 71 DTALKLSLIS---QEITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 71 ~~~~~~~~~~---~~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
++.+.++.+. ..+|++||+++.... .+...+++|+.++.++++++...
T Consensus 76 ~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~ 135 (273)
T PRK08278 76 QVAAAVAKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPH 135 (273)
T ss_pred HHHHHHHHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHH
Confidence 8887776541 128999999986321 24456789999999999988754
|
|
| >PRK06114 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=2.6e-13 Score=110.18 Aligned_cols=125 Identities=13% Similarity=-0.059 Sum_probs=89.3
Q ss_pred ccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC-C-----C--CCCCceeEEEeeCCCHHHHHHH
Q 028258 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-W-----F--PTALVDRYITFDALDPTDTALK 75 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~-~-----~--~~~~~~~~i~~Dl~d~~~~~~~ 75 (211)
|..+..|++|||||+|+||++++++|+ +.|++|++++|+.+.. . . ...++. .+.+|++|++++.+.
T Consensus 3 ~~~~~~k~~lVtG~s~gIG~~ia~~l~-----~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~-~~~~D~~~~~~i~~~ 76 (254)
T PRK06114 3 LFDLDGQVAFVTGAGSGIGQRIAIGLA-----QAGADVALFDLRTDDGLAETAEHIEAAGRRAI-QIAADVTSKADLRAA 76 (254)
T ss_pred ccCCCCCEEEEECCCchHHHHHHHHHH-----HCCCEEEEEeCCcchHHHHHHHHHHhcCCceE-EEEcCCCCHHHHHHH
Confidence 334457899999999999999999999 6899999999875421 0 0 124577 889999999988877
Q ss_pred HHhccc---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 76 LSLISQ---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 76 ~~~~~~---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
++.+.. .+|++||+++... .++...+++|+.++..+++++...+... +..+++++||..
T Consensus 77 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~isS~~ 147 (254)
T PRK06114 77 VARTEAELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLEN-GGGSIVNIASMS 147 (254)
T ss_pred HHHHHHHcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhc-CCcEEEEECchh
Confidence 765421 3799999998632 1345567899998877777664431101 235777777644
|
|
| >PRK09730 putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.6e-13 Score=110.47 Aligned_cols=165 Identities=12% Similarity=0.041 Sum_probs=104.4
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEE-eCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHhcc-
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGA-ARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSLIS- 80 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~-~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~- 80 (211)
+++|||||+|+||++++++|+ ++|++|+++ .|++.... ....++. .+.+|++|++++.++++.+.
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~-----~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~d~~~i~~~~~~~~~ 75 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLA-----QEGYTVAVNYQQNLHAAQEVVNLITQAGGKAF-VLQADISDENQVVAMFTAIDQ 75 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHH-----HCCCEEEEEeCCChHHHHHHHHHHHhCCCeEE-EEEccCCCHHHHHHHHHHHHH
Confidence 689999999999999999999 689998875 45433210 0123577 89999999999988887653
Q ss_pred --cccceEEeecccCCc----------hhHHHHhhcHHHHHHHHHHHHhcCC--CCCCceEEEEeecCeeeecccCCccc
Q 028258 81 --QEITNLFWVPLQVQE----------SEEVNIFKNSTMLKNVLSVLVSSNS--GRSRLRHVALLTGTKHYMGPIFDPSL 146 (211)
Q Consensus 81 --~~~~~v~~~a~~~~~----------~~~~~~~~n~~~~~~l~~~~~~~~~--~~~~~~~~~~~s~~~~y~~~~~~~~~ 146 (211)
..+|+|||+++.... ++...+++|+.++.++++++...+. ...+-.+|+++||...+.+.
T Consensus 76 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~------ 149 (247)
T PRK09730 76 HDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGA------ 149 (247)
T ss_pred hCCCCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCC------
Confidence 137899999986321 2345678899988777766544310 01112457888775433210
Q ss_pred cCCCCCCCCCCcCCCCCCCCCCcchhHHHHHhh-----cCCCceEEEecCCceEecCC
Q 028258 147 AGQLMPYEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 147 ~g~~~~~~~~~~e~~~~~~~~~~~~~~e~~l~~-----~~~~~~~~i~Rp~~i~G~~~ 199 (211)
| .+..+ ........+.++.. ...+++++++||+.++++..
T Consensus 150 ---------~-~~~~~---Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~ 194 (247)
T PRK09730 150 ---------P-GEYVD---YAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMH 194 (247)
T ss_pred ---------C-Ccccc---hHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCccc
Confidence 0 00000 00111222222221 34689999999999999853
|
|
| >PRK08589 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.53 E-value=2.5e-13 Score=111.54 Aligned_cols=125 Identities=13% Similarity=-0.055 Sum_probs=87.9
Q ss_pred ccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC------CCCCCceeEEEeeCCCHHHHHHHHH
Q 028258 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW------FPTALVDRYITFDALDPTDTALKLS 77 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~ 77 (211)
|..+.+|++|||||+|+||++++++|+ ++|++|++++|++.... ....++. ++.+|++|++++..+++
T Consensus 1 m~~l~~k~vlItGas~gIG~aia~~l~-----~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~ 74 (272)
T PRK08589 1 MKRLENKVAVITGASTGIGQASAIALA-----QEGAYVLAVDIAEAVSETVDKIKSNGGKAK-AYHVDISDEQQVKDFAS 74 (272)
T ss_pred CCCCCCCEEEEECCCchHHHHHHHHHH-----HCCCEEEEEeCcHHHHHHHHHHHhcCCeEE-EEEeecCCHHHHHHHHH
Confidence 334456899999999999999999999 68999999999822110 0123578 89999999988877776
Q ss_pred hccc---ccceEEeecccCCc----------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCee
Q 028258 78 LISQ---EITNLFWVPLQVQE----------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKH 136 (211)
Q Consensus 78 ~~~~---~~~~v~~~a~~~~~----------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~ 136 (211)
.+.. .+|++||+++.... .+...+++|+.++..+++++...+... + .+++++||...
T Consensus 75 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~-g~iv~isS~~~ 144 (272)
T PRK08589 75 EIKEQFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQ-G-GSIINTSSFSG 144 (272)
T ss_pred HHHHHcCCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-C-CEEEEeCchhh
Confidence 5431 38999999976321 234566789888777766655432101 2 47888877543
|
|
| >PRK07814 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=2.7e-13 Score=110.71 Aligned_cols=121 Identities=16% Similarity=-0.011 Sum_probs=89.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHhcc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSLIS 80 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~ 80 (211)
.++++|||||+|+||++++++|+ ++|++|++++|++.+.. ....+++ ++.+|+++++++.++++.+.
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~-----~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~-~~~~D~~~~~~~~~~~~~~~ 82 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFA-----EAGADVLIAARTESQLDEVAEQIRAAGRRAH-VVAADLAHPEATAGLAGQAV 82 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEE-EEEccCCCHHHHHHHHHHHH
Confidence 46899999999999999999999 68999999999764311 0124678 89999999998877776541
Q ss_pred c---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 81 Q---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 81 ~---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
. .+|+|||+|+... .++...+.+|+.++.++.+++...+....+..+++++||.
T Consensus 83 ~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~ 148 (263)
T PRK07814 83 EAFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISST 148 (263)
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccc
Confidence 1 2899999997522 1345577999999999999887532100134577777764
|
|
| >PRK06057 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.3e-13 Score=111.99 Aligned_cols=121 Identities=13% Similarity=-0.037 Sum_probs=84.6
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC--CCCCCceeEEEeeCCCHHHHHHHHHhcc---c
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW--FPTALVDRYITFDALDPTDTALKLSLIS---Q 81 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~--~~~~~~~~~i~~Dl~d~~~~~~~~~~~~---~ 81 (211)
+++|+++||||||+||++++++|+ ++|++|++++|++.... ......+ ++.+|++|++++.+.++.+. .
T Consensus 5 ~~~~~vlItGasggIG~~~a~~l~-----~~G~~v~~~~r~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~ 78 (255)
T PRK06057 5 LAGRVAVITGGGSGIGLATARRLA-----AEGATVVVGDIDPEAGKAAADEVGGL-FVPTDVTDEDAVNALFDTAAETYG 78 (255)
T ss_pred CCCCEEEEECCCchHHHHHHHHHH-----HcCCEEEEEeCCHHHHHHHHHHcCCc-EEEeeCCCHHHHHHHHHHHHHHcC
Confidence 346899999999999999999999 68999999999765321 0111236 88999999998888777542 1
Q ss_pred ccceEEeecccCCc-----------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 82 EITNLFWVPLQVQE-----------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 82 ~~~~v~~~a~~~~~-----------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
.+|++||+++.... .+...+++|+.++.++++.+...+... +..+++++||.
T Consensus 79 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~g~iv~~sS~ 141 (255)
T PRK06057 79 SVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQ-GKGSIINTASF 141 (255)
T ss_pred CCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHh-CCcEEEEEcch
Confidence 27999999975321 244567889888777776654321001 23467776663
|
|
| >PRK12747 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=2.8e-13 Score=109.70 Aligned_cols=162 Identities=10% Similarity=-0.048 Sum_probs=104.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeC-CCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAAR-RPPPGW-------FPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R-~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
++|+++||||+|+||++++++|+ +.|++|+++.+ +..... .....+. .+.+|+++.+++...++.+
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~-----~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~ 76 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLA-----NDGALVAIHYGNRKEEAEETVYEIQSNGGSAF-SIGANLESLHGVEALYSSL 76 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHH-----HCCCeEEEEcCCCHHHHHHHHHHHHhcCCceE-EEecccCCHHHHHHHHHHH
Confidence 46899999999999999999999 69999987754 322210 0123466 7889999998776555432
Q ss_pred c---------cccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeeccc
Q 028258 80 S---------QEITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPI 141 (211)
Q Consensus 80 ~---------~~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~ 141 (211)
. ..+|.+||+|+.... .+...+++|+.++..+++++...+. .-.+|+++||...+..
T Consensus 77 ~~~~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~---~~g~iv~isS~~~~~~-- 151 (252)
T PRK12747 77 DNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLR---DNSRIINISSAATRIS-- 151 (252)
T ss_pred HHHhhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhh---cCCeEEEECCcccccC--
Confidence 1 138999999985321 2456678999999999887776521 1247888887543321
Q ss_pred CCccccCCCCCCCCCCcCCCCCCCCCCcchhHHHHHhh-----cCCCceEEEecCCceEecC
Q 028258 142 FDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 142 ~~~~~~g~~~~~~~~~~e~~~~~~~~~~~~~~e~~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
.....+ ....+.+.+.+.+. ...++.+..+.|+.+.++-
T Consensus 152 ---------------~~~~~~---Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~ 195 (252)
T PRK12747 152 ---------------LPDFIA---YSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDM 195 (252)
T ss_pred ---------------CCCchh---HHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCch
Confidence 000000 00111222222221 3568999999999998764
|
|
| >PRK09134 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=4.6e-13 Score=108.89 Aligned_cols=109 Identities=15% Similarity=0.020 Sum_probs=82.2
Q ss_pred ccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC-CC-------CCCCCceeEEEeeCCCHHHHHHH
Q 028258 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP-GW-------FPTALVDRYITFDALDPTDTALK 75 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~-~~-------~~~~~~~~~i~~Dl~d~~~~~~~ 75 (211)
|.+.++|++|||||+|+||++++++|+ +.|++|+++.|+... .. .....++ ++.+|++|.+++.++
T Consensus 4 ~~~~~~k~vlItGas~giG~~la~~l~-----~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~~~~~ 77 (258)
T PRK09134 4 MSMAAPRAALVTGAARRIGRAIALDLA-----AHGFDVAVHYNRSRDEAEALAAEIRALGRRAV-ALQADLADEAEVRAL 77 (258)
T ss_pred CcCCCCCEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEE-EEEcCCCCHHHHHHH
Confidence 334467899999999999999999999 689999887775321 10 0134578 899999999988887
Q ss_pred HHhcc---cccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhc
Q 028258 76 LSLIS---QEITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 76 ~~~~~---~~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
++.+. ..+|+|||+++.... .+...+++|+.++.++++++...
T Consensus 78 ~~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 132 (258)
T PRK09134 78 VARASAALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARA 132 (258)
T ss_pred HHHHHHHcCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 76542 138999999975321 34557799999999999887764
|
|
| >PRK07904 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=5.6e-13 Score=108.49 Aligned_cols=116 Identities=17% Similarity=0.130 Sum_probs=81.7
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCC-CcEEEEEeCCCCC-CC-------C-CCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGS-PWKVYGAARRPPP-GW-------F-PTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~-g~~V~~~~R~~~~-~~-------~-~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
.+++|||||||+||++++++|+ ++ |++|++++|++++ .. . ...+++ ++.+|++|++++.+.++.
T Consensus 8 ~~~vlItGas~giG~~la~~l~-----~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~-~~~~D~~~~~~~~~~~~~ 81 (253)
T PRK07904 8 PQTILLLGGTSEIGLAICERYL-----KNAPARVVLAALPDDPRRDAAVAQMKAAGASSVE-VIDFDALDTDSHPKVIDA 81 (253)
T ss_pred CcEEEEEcCCcHHHHHHHHHHH-----hcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceE-EEEecCCChHHHHHHHHH
Confidence 5789999999999999999999 45 5999999998764 10 0 113678 999999999876665553
Q ss_pred cc--cccceEEeecccCCc------hh---HHHHhhcHHHHHH----HHHHHHhcCCCCCCceEEEEeecCe
Q 028258 79 IS--QEITNLFWVPLQVQE------SE---EVNIFKNSTMLKN----VLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 79 ~~--~~~~~v~~~a~~~~~------~~---~~~~~~n~~~~~~----l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
+. ..+|.+|++++.... ++ .+.+++|+.++.. +++.+.+. +..+|+++||..
T Consensus 82 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~-----~~~~iv~isS~~ 148 (253)
T PRK07904 82 AFAGGDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQ-----GFGQIIAMSSVA 148 (253)
T ss_pred HHhcCCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhc-----CCceEEEEechh
Confidence 31 138999988876432 11 1346888877665 45555543 346888888753
|
|
| >PRK08277 D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=3.2e-13 Score=111.03 Aligned_cols=166 Identities=14% Similarity=0.040 Sum_probs=106.6
Q ss_pred CCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 6 QNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 6 ~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
.+.+|+++||||+|+||++++++|+ ++|++|++++|+..... ....++. ++.+|++|++++...++.
T Consensus 7 ~~~~k~vlVtGas~giG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~v~~~~~~ 80 (278)
T PRK08277 7 SLKGKVAVITGGGGVLGGAMAKELA-----RAGAKVAILDRNQEKAEAVVAEIKAAGGEAL-AVKADVLDKESLEQARQQ 80 (278)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCeEE-EEECCCCCHHHHHHHHHH
Confidence 3346899999999999999999999 68999999999754210 0123577 889999999888777665
Q ss_pred ccc---ccceEEeecccCC------------------------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEe
Q 028258 79 ISQ---EITNLFWVPLQVQ------------------------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALL 131 (211)
Q Consensus 79 ~~~---~~~~v~~~a~~~~------------------------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~ 131 (211)
+.. .+|++||+++... .++...+++|+.++..+++++...+... +..+|+++
T Consensus 81 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~ii~i 159 (278)
T PRK08277 81 ILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGR-KGGNIINI 159 (278)
T ss_pred HHHHcCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-CCcEEEEE
Confidence 321 3899999987421 1344567889888776665554321001 23578888
Q ss_pred ecCeeeecccCCccccCCCCCCCCCCcCCCCCCCCCCcchhHHHHHhh-----cCCCceEEEecCCceEecC
Q 028258 132 TGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 132 s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~~~~~~~~~~~~~e~~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
||...|.. ... .+ .....+.+.+.+.+. ...++++..++|+.+..+.
T Consensus 160 sS~~~~~~-----------------~~~-~~--~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~ 211 (278)
T PRK08277 160 SSMNAFTP-----------------LTK-VP--AYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQ 211 (278)
T ss_pred ccchhcCC-----------------CCC-Cc--hhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcc
Confidence 87554421 000 00 000111222222222 3468999999999998774
|
|
| >PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=2e-13 Score=109.72 Aligned_cols=122 Identities=16% Similarity=-0.021 Sum_probs=87.4
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEE-eCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGA-ARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~-~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
.|+|++|||||||+||++++++|+ +.|++|+++ +|++.... .....+. ++.+|++|++++.+.++.
T Consensus 3 ~~~~~ilI~Gasg~iG~~la~~l~-----~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~ 76 (247)
T PRK05565 3 LMGKVAIVTGASGGIGRAIAELLA-----KEGAKVVIAYDINEEAAQELLEEIKEEGGDAI-AVKADVSSEEDVENLVEQ 76 (247)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEE-EEECCCCCHHHHHHHHHH
Confidence 345899999999999999999999 689999988 88654310 0124577 889999999988777765
Q ss_pred ccc---ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 79 ISQ---EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 79 ~~~---~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
+.. .+|.|||+++.... .+...+++|..++.++++.+...+. ..+..+++++||..
T Consensus 77 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~~v~~sS~~ 144 (247)
T PRK05565 77 IVEKFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMI-KRKSGVIVNISSIW 144 (247)
T ss_pred HHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-hcCCcEEEEECCHh
Confidence 421 38999999976421 2345678899998888777764310 01245678877743
|
|
| >PRK06841 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=3e-13 Score=109.60 Aligned_cols=122 Identities=12% Similarity=-0.038 Sum_probs=89.7
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC----CCCCCceeEEEeeCCCHHHHHHHHHhccc-
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW----FPTALVDRYITFDALDPTDTALKLSLISQ- 81 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~----~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~- 81 (211)
...|++|||||+|+||++++++|+ ++|++|++++|++.... .....+. ++.+|+++++++.+.++.+..
T Consensus 13 ~~~k~vlItGas~~IG~~la~~l~-----~~G~~Vi~~~r~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~~ 86 (255)
T PRK06841 13 LSGKVAVVTGGASGIGHAIAELFA-----AKGARVALLDRSEDVAEVAAQLLGGNAK-GLVCDVSDSQSVEAAVAAVISA 86 (255)
T ss_pred CCCCEEEEECCCChHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHhhCCceE-EEEecCCCHHHHHHHHHHHHHH
Confidence 346899999999999999999999 68999999999764211 1224567 889999999988877765421
Q ss_pred --ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 82 --EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 82 --~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
.+|.+||+++.... ++...+++|+.++.++++++...+... +..+|+++||..
T Consensus 87 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~~sS~~ 150 (255)
T PRK06841 87 FGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAA-GGGKIVNLASQA 150 (255)
T ss_pred hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhc-CCceEEEEcchh
Confidence 27999999986421 334567899999999888876532101 246788887743
|
|
| >PRK08339 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=4.7e-13 Score=109.48 Aligned_cols=127 Identities=17% Similarity=0.053 Sum_probs=89.6
Q ss_pred CccccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC--------CCCCCceeEEEeeCCCHHHH
Q 028258 1 MEKQDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW--------FPTALVDRYITFDALDPTDT 72 (211)
Q Consensus 1 ~~~~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~--------~~~~~~~~~i~~Dl~d~~~~ 72 (211)
|.+|. +++|++|||||+|+||++++++|+ ++|++|++++|+..+.. ....++. ++.+|++|++++
T Consensus 1 ~~~~~-l~~k~~lItGas~gIG~aia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~i 73 (263)
T PRK08339 1 MLKID-LSGKLAFTTASSKGIGFGVARVLA-----RAGADVILLSRNEENLKKAREKIKSESNVDVS-YIVADLTKREDL 73 (263)
T ss_pred CCccC-CCCCEEEEeCCCCcHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhhcCCceE-EEEecCCCHHHH
Confidence 44553 346899999999999999999999 68999999999754311 0124678 899999999988
Q ss_pred HHHHHhcc--cccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 73 ALKLSLIS--QEITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 73 ~~~~~~~~--~~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
.+.++.+. ..+|+++|+++... .++...+++|+.+...+++++...+... +..+++++||..
T Consensus 74 ~~~~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~-~~g~Ii~isS~~ 146 (263)
T PRK08339 74 ERTVKELKNIGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERK-GFGRIIYSTSVA 146 (263)
T ss_pred HHHHHHHHhhCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCCEEEEEcCcc
Confidence 77776542 13899999987532 2455677889877666555554332101 235788888754
|
|
| >PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=6.1e-13 Score=106.49 Aligned_cols=117 Identities=15% Similarity=0.130 Sum_probs=85.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccceEE
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITNLF 87 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~ 87 (211)
+.|+++||||+|+||++++++|+ ++|++|++++|++... ...++. ++.+|++++ +++.++.... +|++|
T Consensus 4 ~~k~~lVtGas~~iG~~ia~~l~-----~~G~~v~~~~r~~~~~--~~~~~~-~~~~D~~~~--~~~~~~~~~~-id~lv 72 (235)
T PRK06550 4 MTKTVLITGAASGIGLAQARAFL-----AQGAQVYGVDKQDKPD--LSGNFH-FLQLDLSDD--LEPLFDWVPS-VDILC 72 (235)
T ss_pred CCCEEEEcCCCchHHHHHHHHHH-----HCCCEEEEEeCCcccc--cCCcEE-EEECChHHH--HHHHHHhhCC-CCEEE
Confidence 45899999999999999999999 6899999999976542 134678 899999987 5555555543 89999
Q ss_pred eecccCC----------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCee
Q 028258 88 WVPLQVQ----------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKH 136 (211)
Q Consensus 88 ~~a~~~~----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~ 136 (211)
|+++... .++...+++|+.++.++++++...+... +..+|+++||...
T Consensus 73 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~~sS~~~ 130 (235)
T PRK06550 73 NTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLER-KSGIIINMCSIAS 130 (235)
T ss_pred ECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEEcChhh
Confidence 9997421 1345568899999988888876431001 2357888877543
|
|
| >PRK12937 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=5.4e-13 Score=107.32 Aligned_cols=118 Identities=14% Similarity=0.036 Sum_probs=86.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC--------CCCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG--------WFPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~--------~~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
++|++|||||+|+||++++++|+ ++|++|+++.|+.... .....++. ++.+|++|++++.+.++.+
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~-----~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~ 77 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLA-----ADGFAVAVNYAGSAAAADELVAEIEAAGGRAI-AVQADVADAAAVTRLFDAA 77 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHH-----HCCCEEEEecCCCHHHHHHHHHHHHhcCCeEE-EEECCCCCHHHHHHHHHHH
Confidence 45899999999999999999999 6899988877754320 01134678 8999999999888887754
Q ss_pred cc---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 80 SQ---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 80 ~~---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
.. .+|++||+++... .++...+++|+.++.++++++.+.+ ..-.+++++||.
T Consensus 78 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~---~~~~~iv~~ss~ 141 (245)
T PRK12937 78 ETAFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHL---GQGGRIINLSTS 141 (245)
T ss_pred HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHh---ccCcEEEEEeec
Confidence 21 2899999998632 1344567899999989888876542 112467777764
|
|
| >PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=2.7e-13 Score=110.60 Aligned_cols=125 Identities=11% Similarity=-0.093 Sum_probs=89.3
Q ss_pred cCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC----CCCCCceeEEEeeCCCHHHHHHHHHhcc
Q 028258 5 DQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW----FPTALVDRYITFDALDPTDTALKLSLIS 80 (211)
Q Consensus 5 ~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~----~~~~~~~~~i~~Dl~d~~~~~~~~~~~~ 80 (211)
.++++|+++||||+|+||++++++|+ +.|++|++++|++.... ....++. ++.+|++|++++.++++.+.
T Consensus 2 ~~~~~k~vlVtGas~gIG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~ 75 (263)
T PRK06200 2 GWLHGQVALITGGGSGIGRALVERFL-----AEGARVAVLERSAEKLASLRQRFGDHVL-VVEGDVTSYADNQRAVDQTV 75 (263)
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHhCCcce-EEEccCCCHHHHHHHHHHHH
Confidence 34456899999999999999999999 68999999999764321 0124577 89999999988877776542
Q ss_pred ---cccceEEeecccCC---c----h-------hHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeee
Q 028258 81 ---QEITNLFWVPLQVQ---E----S-------EEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 137 (211)
Q Consensus 81 ---~~~~~v~~~a~~~~---~----~-------~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y 137 (211)
..+|.+||+++... . + +...+++|+.++..+++++...+.. .-.++++++|...+
T Consensus 76 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~g~iv~~sS~~~~ 147 (263)
T PRK06200 76 DAFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKA--SGGSMIFTLSNSSF 147 (263)
T ss_pred HhcCCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHh--cCCEEEEECChhhc
Confidence 13899999998531 0 1 3445688999888888877654210 11467777775443
|
|
| >PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.51 E-value=4.6e-13 Score=108.71 Aligned_cols=125 Identities=11% Similarity=-0.026 Sum_probs=89.6
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----CCCCCceeEEEeeCCCHHHHHHHHHhccc
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----FPTALVDRYITFDALDPTDTALKLSLISQ 81 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~ 81 (211)
..+|++|||||+|+||++++++|+ +.|++|++++|+..... .....+. ++.+|++|.+++.+.++.+..
T Consensus 8 l~~k~~lItG~~~gIG~a~a~~l~-----~~G~~vv~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~ 81 (253)
T PRK08993 8 LEGKVAVVTGCDTGLGQGMALGLA-----EAGCDIVGINIVEPTETIEQVTALGRRFL-SLTADLRKIDGIPALLERAVA 81 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHH-----HCCCEEEEecCcchHHHHHHHHhcCCeEE-EEECCCCCHHHHHHHHHHHHH
Confidence 346899999999999999999999 68999998877543210 0124567 889999999888877765421
Q ss_pred ---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeee
Q 028258 82 ---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 137 (211)
Q Consensus 82 ---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y 137 (211)
.+|++||+|+... .++...+++|+.++.++++++...+.....-.+++++||...+
T Consensus 82 ~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~ 149 (253)
T PRK08993 82 EFGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSF 149 (253)
T ss_pred HhCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhc
Confidence 3899999998632 2455678999999988888776542101112467888776544
|
|
| >PRK05650 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=4.9e-13 Score=109.53 Aligned_cols=120 Identities=12% Similarity=0.005 Sum_probs=84.8
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHhccc-
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSLISQ- 81 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~- 81 (211)
|+++||||||+||++++++|+ +.|++|++++|+..... .....+. ++.+|++|++++.+.++.+..
T Consensus 1 ~~vlVtGasggIG~~la~~l~-----~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~-~~~~D~~~~~~~~~~~~~i~~~ 74 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWA-----REGWRLALADVNEEGGEETLKLLREAGGDGF-YQRCDVRDYSQLTALAQACEEK 74 (270)
T ss_pred CEEEEecCCChHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCceE-EEEccCCCHHHHHHHHHHHHHH
Confidence 479999999999999999999 68999999998765311 1134677 899999999888777764321
Q ss_pred --ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCee
Q 028258 82 --EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKH 136 (211)
Q Consensus 82 --~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~ 136 (211)
.+|++||+++.... ++...+++|+.++.++.+.+...+. ..+..+|+++||...
T Consensus 75 ~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~~~iv~vsS~~~ 139 (270)
T PRK05650 75 WGGIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFK-RQKSGRIVNIASMAG 139 (270)
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHH-hCCCCEEEEECChhh
Confidence 38999999986321 2344568898777666665432210 013567888877543
|
|
| >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=5.6e-13 Score=108.40 Aligned_cols=124 Identities=11% Similarity=0.022 Sum_probs=88.6
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC------CCCCCceeEEEeeCCCHHHHHHHHHhcc
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW------FPTALVDRYITFDALDPTDTALKLSLIS 80 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~ 80 (211)
.++|++|||||+|+||++++++|+ +.|++|+++.|+..... .....++ ++.+|++|.+++...++.+.
T Consensus 13 l~~k~vlItGas~gIG~~ia~~l~-----~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~i~~~~~~~~ 86 (258)
T PRK06935 13 LDGKVAIVTGGNTGLGQGYAVALA-----KAGADIIITTHGTNWDETRRLIEKEGRKVT-FVQVDLTKPESAEKVVKEAL 86 (258)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHH-----HCCCEEEEEeCCcHHHHHHHHHHhcCCceE-EEEcCCCCHHHHHHHHHHHH
Confidence 356899999999999999999999 68999999988732110 0134678 99999999998877776542
Q ss_pred c---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeee
Q 028258 81 Q---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 137 (211)
Q Consensus 81 ~---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y 137 (211)
. .+|++||+++... .++...+++|+.++.++.+++...+... +..+++++||...+
T Consensus 87 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~isS~~~~ 154 (258)
T PRK06935 87 EEFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQ-GSGKIINIASMLSF 154 (258)
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhc-CCeEEEEECCHHhc
Confidence 1 2899999998632 1344567889888777776665432101 23578888775443
|
|
| >PRK06172 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=4.7e-13 Score=108.41 Aligned_cols=123 Identities=12% Similarity=-0.040 Sum_probs=87.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHhcc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSLIS 80 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~ 80 (211)
..|+++||||+|+||++++++|+ ++|++|++++|++.... ....+++ ++.+|++|.+++.+.++.+.
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~-----~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~i~~~~~~~~ 79 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFA-----REGAKVVVADRDAAGGEETVALIREAGGEAL-FVACDVTRDAEVKALVEQTI 79 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHH-----HcCCEEEEEeCCHHHHHHHHHHHHhcCCceE-EEEcCCCCHHHHHHHHHHHH
Confidence 46899999999999999999999 68999999999765311 1134678 89999999998887776542
Q ss_pred ---cccceEEeecccCC----------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeee
Q 028258 81 ---QEITNLFWVPLQVQ----------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 137 (211)
Q Consensus 81 ---~~~~~v~~~a~~~~----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y 137 (211)
..+|++||+++... .++.+.+++|+.++..+++++...+. ..+..+++++||...+
T Consensus 80 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~~~ii~~sS~~~~ 148 (253)
T PRK06172 80 AAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLML-AQGGGAIVNTASVAGL 148 (253)
T ss_pred HHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-hcCCcEEEEECchhhc
Confidence 12799999997531 13445678899888776665443210 0123577888775444
|
|
| >PRK05867 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=4e-13 Score=108.96 Aligned_cols=124 Identities=14% Similarity=-0.086 Sum_probs=88.4
Q ss_pred cCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHH
Q 028258 5 DQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLS 77 (211)
Q Consensus 5 ~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~ 77 (211)
.+..+|++|||||+|+||++++++|+ +.|++|++++|+..... ....++. .+.+|++|++++.++++
T Consensus 5 ~~~~~k~vlVtGas~gIG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~-~~~~D~~~~~~~~~~~~ 78 (253)
T PRK05867 5 FDLHGKRALITGASTGIGKRVALAYV-----EAGAQVAIAARHLDALEKLADEIGTSGGKVV-PVCCDVSQHQQVTSMLD 78 (253)
T ss_pred ccCCCCEEEEECCCchHHHHHHHHHH-----HCCCEEEEEcCCHHHHHHHHHHHHhcCCeEE-EEEccCCCHHHHHHHHH
Confidence 34457899999999999999999999 68999999999754311 0124577 88999999998888776
Q ss_pred hccc---ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 78 LISQ---EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 78 ~~~~---~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
.+.. .+|++||+++.... .+...+++|+.++..+++++...+.....-.+++++||.
T Consensus 79 ~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~ 147 (253)
T PRK05867 79 QVTAELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASM 147 (253)
T ss_pred HHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcH
Confidence 5421 38999999986321 344567899999888888776432101111356666653
|
|
| >PRK06953 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=5.4e-13 Score=106.20 Aligned_cols=117 Identities=16% Similarity=0.193 Sum_probs=86.6
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-CCCCCceeEEEeeCCCHHHHHHHHHhccc-ccceEE
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-FPTALVDRYITFDALDPTDTALKLSLISQ-EITNLF 87 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~-~~~~v~ 87 (211)
++++||||+|+||++++++|+ +.|++|++++|+++... ....+++ ++.+|++|.+.+.+.+..+.. .+|++|
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~-----~~G~~v~~~~r~~~~~~~~~~~~~~-~~~~D~~~~~~v~~~~~~~~~~~~d~vi 75 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYR-----ADGWRVIATARDAAALAALQALGAE-ALALDVADPASVAGLAWKLDGEALDAAV 75 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHH-----hCCCEEEEEECCHHHHHHHHhccce-EEEecCCCHHHHHHHHHHhcCCCCCEEE
Confidence 689999999999999999999 68999999999865321 1224567 899999999988887655432 389999
Q ss_pred eecccCC-----------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 88 WVPLQVQ-----------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 88 ~~a~~~~-----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
|+++... .++...+++|+.++.++++++...+. . .-.++++++|.
T Consensus 76 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~-~~g~iv~isS~ 131 (222)
T PRK06953 76 YVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVE-A-AGGVLAVLSSR 131 (222)
T ss_pred ECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhh-c-cCCeEEEEcCc
Confidence 9987631 13456789999999999988876421 0 11356666654
|
|
| >PRK09242 tropinone reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=6.1e-13 Score=108.06 Aligned_cols=168 Identities=14% Similarity=0.001 Sum_probs=110.5
Q ss_pred cCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC---------CCCCCceeEEEeeCCCHHHHHHH
Q 028258 5 DQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW---------FPTALVDRYITFDALDPTDTALK 75 (211)
Q Consensus 5 ~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~---------~~~~~~~~~i~~Dl~d~~~~~~~ 75 (211)
.....|++|||||+|+||++++++|+ ++|++|++++|+.+... .....+. ++.+|+++++++.+.
T Consensus 5 ~~~~~k~~lItGa~~gIG~~~a~~l~-----~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~-~~~~Dl~~~~~~~~~ 78 (257)
T PRK09242 5 WRLDGQTALITGASKGIGLAIAREFL-----GLGADVLIVARDADALAQARDELAEEFPEREVH-GLAADVSDDEDRRAI 78 (257)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHH-----HcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEE-EEECCCCCHHHHHHH
Confidence 34457899999999999999999999 68999999999764310 0124567 889999999888777
Q ss_pred HHhccc---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCC
Q 028258 76 LSLISQ---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFD 143 (211)
Q Consensus 76 ~~~~~~---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~ 143 (211)
++.+.. .+|++||+++... .++...+.+|+.++.++++++...+... +..+++++||...+...
T Consensus 79 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~ii~~sS~~~~~~~--- 154 (257)
T PRK09242 79 LDWVEDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQH-ASSAIVNIGSVSGLTHV--- 154 (257)
T ss_pred HHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-CCceEEEECccccCCCC---
Confidence 765421 3899999998621 1345567899999888888775432101 23678888775433210
Q ss_pred ccccCCCCCCCCCCcCCCCCCCCCCcchhHHHHHhh-----cCCCceEEEecCCceEecCC
Q 028258 144 PSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 144 ~~~~g~~~~~~~~~~e~~~~~~~~~~~~~~e~~l~~-----~~~~~~~~i~Rp~~i~G~~~ 199 (211)
....+ ........+.+.+. ...++++..++|+.+..+..
T Consensus 155 --------------~~~~~---Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~ 198 (257)
T PRK09242 155 --------------RSGAP---YGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLT 198 (257)
T ss_pred --------------CCCcc---hHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCccc
Confidence 00000 00111122222221 34689999999999987653
|
|
| >PRK07035 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=4.8e-13 Score=108.27 Aligned_cols=124 Identities=9% Similarity=-0.064 Sum_probs=87.5
Q ss_pred ccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHH
Q 028258 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKL 76 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~ 76 (211)
+..+++|++|||||+|+||++++++|+ +.|++|++++|+..... .....++ ++.+|++|.+++.+.+
T Consensus 3 ~~~l~~k~vlItGas~gIG~~l~~~l~-----~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~ 76 (252)
T PRK07035 3 LFDLTGKIALVTGASRGIGEAIAKLLA-----QQGAHVIVSSRKLDGCQAVADAIVAAGGKAE-ALACHIGEMEQIDALF 76 (252)
T ss_pred ccccCCCEEEEECCCcHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCeEE-EEEcCCCCHHHHHHHH
Confidence 334557899999999999999999999 68999999999754311 0123567 8899999998887776
Q ss_pred Hhccc---ccceEEeecccCC----------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 77 SLISQ---EITNLFWVPLQVQ----------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 77 ~~~~~---~~~~v~~~a~~~~----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
+.+.. .+|+++|+++... ..+...+++|+.++..+++++...+. ..+..+++++||.
T Consensus 77 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~iv~~sS~ 146 (252)
T PRK07035 77 AHIRERHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMK-EQGGGSIVNVASV 146 (252)
T ss_pred HHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-hCCCcEEEEECch
Confidence 65421 2899999997421 12445678899888877766643311 1134577777764
|
|
| >PRK07023 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=7e-13 Score=106.85 Aligned_cols=120 Identities=18% Similarity=0.116 Sum_probs=85.0
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC--CCCCCceeEEEeeCCCHHHHHHHHHh-c----c--c
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW--FPTALVDRYITFDALDPTDTALKLSL-I----S--Q 81 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~--~~~~~~~~~i~~Dl~d~~~~~~~~~~-~----~--~ 81 (211)
++|||||||+||++++++|+ +.|++|++++|+..+.. ....++. ++.+|++|.+++.+.+.+ + . .
T Consensus 3 ~vlItGasggiG~~ia~~l~-----~~G~~v~~~~r~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~~~~~ 76 (243)
T PRK07023 3 RAIVTGHSRGLGAALAEQLL-----QPGIAVLGVARSRHPSLAAAAGERLA-EVELDLSDAAAAAAWLAGDLLAAFVDGA 76 (243)
T ss_pred eEEEecCCcchHHHHHHHHH-----hCCCEEEEEecCcchhhhhccCCeEE-EEEeccCCHHHHHHHHHHHHHHHhccCC
Confidence 79999999999999999999 68999999999765321 1234678 899999999988775543 1 1 1
Q ss_pred ccceEEeecccCCc----------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeee
Q 028258 82 EITNLFWVPLQVQE----------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 137 (211)
Q Consensus 82 ~~~~v~~~a~~~~~----------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y 137 (211)
.++++||+++.... .+...+++|+.++..+.+.+...+. .....+++++||...+
T Consensus 77 ~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~iv~isS~~~~ 141 (243)
T PRK07023 77 SRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAAS-DAAERRILHISSGAAR 141 (243)
T ss_pred CceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhh-ccCCCEEEEEeChhhc
Confidence 27889999876321 2345678899987776666654321 0124578888875433
|
|
| >PRK08703 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.1e-12 Score=105.54 Aligned_cols=121 Identities=12% Similarity=-0.030 Sum_probs=81.7
Q ss_pred CCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC--------CCCCCceeEEEeeCCCH--HHHHHH
Q 028258 6 QNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW--------FPTALVDRYITFDALDP--TDTALK 75 (211)
Q Consensus 6 ~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~--------~~~~~~~~~i~~Dl~d~--~~~~~~ 75 (211)
.+.+|+++||||+|+||++++++|+ ++|++|++++|++.... .....+. .+.+|+++. +++.+.
T Consensus 3 ~l~~k~vlItG~sggiG~~la~~l~-----~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~-~~~~D~~~~~~~~~~~~ 76 (239)
T PRK08703 3 TLSDKTILVTGASQGLGEQVAKAYA-----AAGATVILVARHQKKLEKVYDAIVEAGHPEPF-AIRFDLMSAEEKEFEQF 76 (239)
T ss_pred CCCCCEEEEECCCCcHHHHHHHHHH-----HcCCEEEEEeCChHHHHHHHHHHHHcCCCCcc-eEEeeecccchHHHHHH
Confidence 3445899999999999999999999 68999999999875311 0123466 788999763 344443
Q ss_pred HH----hcccccceEEeecccCC----------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeec
Q 028258 76 LS----LISQEITNLFWVPLQVQ----------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTG 133 (211)
Q Consensus 76 ~~----~~~~~~~~v~~~a~~~~----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~ 133 (211)
++ ..+..+|+|||+++... .++...+++|+.++.++++++...+... +..+++++++
T Consensus 77 ~~~i~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-~~~~iv~~ss 147 (239)
T PRK08703 77 AATIAEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQS-PDASVIFVGE 147 (239)
T ss_pred HHHHHHHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhC-CCCEEEEEec
Confidence 32 22113799999998531 1234467899999888888776542101 2346677665
|
|
| >PRK08177 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=8.1e-13 Score=105.40 Aligned_cols=116 Identities=20% Similarity=0.186 Sum_probs=85.0
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC--CCCCCceeEEEeeCCCHHHHHHHHHhccc-ccceE
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW--FPTALVDRYITFDALDPTDTALKLSLISQ-EITNL 86 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~--~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~-~~~~v 86 (211)
|+++||||+|++|++++++|+ +.|++|++++|++.... ....++. ++.+|++|++++.+.++.+.. .+|+|
T Consensus 2 k~vlItG~sg~iG~~la~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~D~~d~~~~~~~~~~~~~~~id~v 75 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLL-----ERGWQVTATVRGPQQDTALQALPGVH-IEKLDMNDPASLDQLLQRLQGQRFDLL 75 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHH-----hCCCEEEEEeCCCcchHHHHhccccc-eEEcCCCCHHHHHHHHHHhhcCCCCEE
Confidence 789999999999999999999 68999999999876431 1124677 889999999988887776532 38999
Q ss_pred EeecccCCc-----------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeec
Q 028258 87 FWVPLQVQE-----------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTG 133 (211)
Q Consensus 87 ~~~a~~~~~-----------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~ 133 (211)
||+++.... ++...+.+|..++..+.+++...+. .+-..++++||
T Consensus 76 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~~~iv~~ss 131 (225)
T PRK08177 76 FVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVR--PGQGVLAFMSS 131 (225)
T ss_pred EEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhh--hcCCEEEEEcc
Confidence 999876321 2334567888888888887765421 11135566655
|
|
| >PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=5e-13 Score=108.01 Aligned_cols=120 Identities=11% Similarity=0.035 Sum_probs=84.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC-CC----CCCCCceeEEEeeCCCHHHHHHHHHhccc-
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP-GW----FPTALVDRYITFDALDPTDTALKLSLISQ- 81 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~-~~----~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~- 81 (211)
++|++|||||+|+||+++++.|+ ++|++|+++.|+... .. ....++. ++.+|++|++++.++++.+..
T Consensus 4 ~~k~ilItGas~gIG~~la~~l~-----~~G~~vv~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~ 77 (253)
T PRK08642 4 SEQTVLVTGGSRGLGAAIARAFA-----REGARVVVNYHQSEDAAEALADELGDRAI-ALQADVTDREQVQAMFATATEH 77 (253)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHH-----HCCCeEEEEcCCCHHHHHHHHHHhCCceE-EEEcCCCCHHHHHHHHHHHHHH
Confidence 45899999999999999999999 689999877654321 10 0124677 889999999988887766421
Q ss_pred ---ccceEEeecccC--------C-------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 82 ---EITNLFWVPLQV--------Q-------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 82 ---~~~~v~~~a~~~--------~-------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
.+|.+||+++.. . ..+.+.+++|+.++.++++++...+. ..+..+++++||.
T Consensus 78 ~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~g~iv~iss~ 147 (253)
T PRK08642 78 FGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMR-EQGFGRIINIGTN 147 (253)
T ss_pred hCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHH-hcCCeEEEEECCc
Confidence 279999998642 0 12345678999999999888764320 0123577777663
|
|
| >PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=4.5e-13 Score=108.05 Aligned_cols=165 Identities=12% Similarity=-0.054 Sum_probs=105.5
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
+.++++|||||+|+||+++++.|+ ++|++|++++|++.+.. ....++. ++.+|++|++++.+.++.+
T Consensus 3 ~~~~~~lItG~~g~iG~~~a~~l~-----~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~ 76 (253)
T PRK08217 3 LKDKVIVITGGAQGLGRAMAEYLA-----QKGAKLALIDLNQEKLEEAVAECGALGTEVR-GYAANVTDEEDVEATFAQI 76 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCceE-EEEcCCCCHHHHHHHHHHH
Confidence 346899999999999999999999 68999999999764310 1134677 8999999998887777654
Q ss_pred c---cccceEEeecccCC------------------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeee
Q 028258 80 S---QEITNLFWVPLQVQ------------------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYM 138 (211)
Q Consensus 80 ~---~~~~~v~~~a~~~~------------------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~ 138 (211)
. ..+|+|||+++... ..+...+++|+.++.++...+...+.....-..++++|+...|+
T Consensus 77 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~~~ 156 (253)
T PRK08217 77 AEDFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIARAG 156 (253)
T ss_pred HHHcCCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccccccC
Confidence 2 12899999987421 12334567899888766655443210011124567777755443
Q ss_pred cccCCccccCCCCCCCCCCcCCCCCCCCCCcchhHHHHHhh-----cCCCceEEEecCCceEecC
Q 028258 139 GPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 139 ~~~~~~~~~g~~~~~~~~~~e~~~~~~~~~~~~~~e~~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
.+. .. .....+.+.+.+... ...+++++.++|+.+.++.
T Consensus 157 ~~~-------------------~~--~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~ 200 (253)
T PRK08217 157 NMG-------------------QT--NYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEM 200 (253)
T ss_pred CCC-------------------Cc--hhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCcc
Confidence 110 00 000111222222222 2468999999999998764
|
|
| >PRK06124 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=6.9e-13 Score=107.61 Aligned_cols=164 Identities=15% Similarity=0.095 Sum_probs=108.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHhcc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSLIS 80 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~ 80 (211)
.+|+++||||+|+||++++++|+ +.|++|++++|++.... ....++. ++.+|++|++.+..+++++.
T Consensus 10 ~~k~ilItGas~~IG~~la~~l~-----~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~ 83 (256)
T PRK06124 10 AGQVALVTGSARGLGFEIARALA-----GAGAHVLVNGRNAATLEAAVAALRAAGGAAE-ALAFDIADEEAVAAAFARID 83 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHH-----HcCCeEEEEeCCHHHHHHHHHHHHhcCCceE-EEEccCCCHHHHHHHHHHHH
Confidence 46899999999999999999999 68999999999764310 1134578 99999999998887776553
Q ss_pred c---ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccC
Q 028258 81 Q---EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAG 148 (211)
Q Consensus 81 ~---~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g 148 (211)
. .+|.+||+++.... ++...+++|+.++.++.+++...+. ..+..+|+++||...+.+
T Consensus 84 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~~~iv~~ss~~~~~~--------- 153 (256)
T PRK06124 84 AEHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMK-RQGYGRIIAITSIAGQVA--------- 153 (256)
T ss_pred HhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-hcCCcEEEEEeechhccC---------
Confidence 2 27899999886321 3445678899988888866654210 013467888777432211
Q ss_pred CCCCCCCCCcCCCCCCCCCCcchhHHHHHhh-----cCCCceEEEecCCceEecC
Q 028258 149 QLMPYEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 149 ~~~~~~~~~~e~~~~~~~~~~~~~~e~~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
.....+ ....+.+.+.+... ...++.+..++|+.+..+.
T Consensus 154 --------~~~~~~---Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~ 197 (256)
T PRK06124 154 --------RAGDAV---YPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATET 197 (256)
T ss_pred --------CCCccH---hHHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcc
Confidence 000000 00111122222111 3468999999999999875
|
|
| >PRK05872 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=6.4e-13 Score=110.55 Aligned_cols=127 Identities=12% Similarity=-0.043 Sum_probs=91.5
Q ss_pred cccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----C-CCCCceeEEEeeCCCHHHHHHHH
Q 028258 3 KQDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----F-PTALVDRYITFDALDPTDTALKL 76 (211)
Q Consensus 3 ~~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----~-~~~~~~~~i~~Dl~d~~~~~~~~ 76 (211)
+|....+|++|||||+|+||++++++|+ +.|++|++++|+..... . ....+. .+.+|++|++++.+++
T Consensus 3 ~~~~l~gk~vlItGas~gIG~~ia~~l~-----~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~-~~~~Dv~d~~~v~~~~ 76 (296)
T PRK05872 3 PMTSLAGKVVVVTGAARGIGAELARRLH-----ARGAKLALVDLEEAELAALAAELGGDDRVL-TVVADVTDLAAMQAAA 76 (296)
T ss_pred CCCCCCCCEEEEECCCchHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHhcCCCcEE-EEEecCCCHHHHHHHH
Confidence 3444557899999999999999999999 68999999999765311 1 123445 5679999999888777
Q ss_pred Hhcc---cccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeee
Q 028258 77 SLIS---QEITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 137 (211)
Q Consensus 77 ~~~~---~~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y 137 (211)
+.+. ..+|.+||+++... ..+...+++|+.++.++++++...+. ....+|+++||...+
T Consensus 77 ~~~~~~~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~--~~~g~iv~isS~~~~ 147 (296)
T PRK05872 77 EEAVERFGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALI--ERRGYVLQVSSLAAF 147 (296)
T ss_pred HHHHHHcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH--HcCCEEEEEeCHhhc
Confidence 6542 13899999998632 13456688999999998888765421 012478888875443
|
|
| >PRK12938 acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.1e-12 Score=105.74 Aligned_cols=119 Identities=18% Similarity=0.111 Sum_probs=83.0
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCC-CCC--C-----CCCCCceeEEEeeCCCHHHHHHHHHhcc
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP-PPG--W-----FPTALVDRYITFDALDPTDTALKLSLIS 80 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~-~~~--~-----~~~~~~~~~i~~Dl~d~~~~~~~~~~~~ 80 (211)
+|+++||||||+||++++++|+ +.|++|+++.++. ... + .....+. .+.+|++|.+++.+.++.+.
T Consensus 3 ~k~~lVtG~s~giG~~~a~~l~-----~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~ 76 (246)
T PRK12938 3 QRIAYVTGGMGGIGTSICQRLH-----KDGFKVVAGCGPNSPRRVKWLEDQKALGFDFI-ASEGNVGDWDSTKAAFDKVK 76 (246)
T ss_pred CCEEEEECCCChHHHHHHHHHH-----HcCCEEEEEcCCChHHHHHHHHHHHhcCCcEE-EEEcCCCCHHHHHHHHHHHH
Confidence 5899999999999999999999 6899988755432 211 0 0123566 77999999988877766542
Q ss_pred ---cccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 81 ---QEITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 81 ---~~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
..+|+|||+++.... ++...+++|+.++.++.+++...+. ..+..+|+++||.
T Consensus 77 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~~~iv~isS~ 141 (246)
T PRK12938 77 AEVGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMV-ERGWGRIINISSV 141 (246)
T ss_pred HHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-HcCCeEEEEEech
Confidence 138999999986431 3455678999987776666544211 1135688888774
|
|
| >PRK07062 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.4e-12 Score=106.47 Aligned_cols=122 Identities=16% Similarity=-0.001 Sum_probs=87.2
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------C--CCCCceeEEEeeCCCHHHHHHHHH
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------F--PTALVDRYITFDALDPTDTALKLS 77 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~--~~~~~~~~i~~Dl~d~~~~~~~~~ 77 (211)
+++|+++||||+|+||++++++|+ +.|++|++++|++.+.. . ....+. .+.+|++|++++.+.++
T Consensus 6 l~~k~~lItGas~giG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~v~~~~~ 79 (265)
T PRK07062 6 LEGRVAVVTGGSSGIGLATVELLL-----EAGASVAICGRDEERLASAEARLREKFPGARLL-AARCDVLDEADVAAFAA 79 (265)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHH-----HCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEE-EEEecCCCHHHHHHHHH
Confidence 457899999999999999999999 68999999999765311 0 123577 88999999998877776
Q ss_pred hcc---cccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 78 LIS---QEITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 78 ~~~---~~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
.+. ..+|++||+|+.... .+...+++|+.+...+++++...+... +..+|+++||..
T Consensus 80 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~isS~~ 148 (265)
T PRK07062 80 AVEARFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRAS-AAASIVCVNSLL 148 (265)
T ss_pred HHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcc-CCcEEEEecccc
Confidence 542 138999999986321 355567888877666666654432101 235788887754
|
|
| >PRK12744 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.7e-12 Score=105.47 Aligned_cols=105 Identities=12% Similarity=-0.082 Sum_probs=79.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC---------C--CCCCceeEEEeeCCCHHHHHHHH
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW---------F--PTALVDRYITFDALDPTDTALKL 76 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~---------~--~~~~~~~~i~~Dl~d~~~~~~~~ 76 (211)
++|++|||||+|+||+++++.|+ +.|++|+.+.++..... . ....++ ++.+|++|++++.+.+
T Consensus 7 ~~k~vlItGa~~gIG~~~a~~l~-----~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~D~~~~~~~~~~~ 80 (257)
T PRK12744 7 KGKVVLIAGGAKNLGGLIARDLA-----AQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAV-AFQADLTTAAAVEKLF 80 (257)
T ss_pred CCcEEEEECCCchHHHHHHHHHH-----HCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEE-EEecCcCCHHHHHHHH
Confidence 45899999999999999999999 68999777776543210 0 123677 8899999999888777
Q ss_pred Hhccc---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhc
Q 028258 77 SLISQ---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 77 ~~~~~---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
+.+.. .+|++||+++... ..+...+++|+.++..+++++...
T Consensus 81 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~ 134 (257)
T PRK12744 81 DDAKAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRH 134 (257)
T ss_pred HHHHHhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHh
Confidence 65421 3899999998622 134456789999998888888764
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.49 E-value=4.7e-13 Score=120.22 Aligned_cols=126 Identities=10% Similarity=-0.062 Sum_probs=92.0
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
+..+++|||||||+||++++++|+ ++|++|++++|+..+.. ....++. ++.+|++|++++.+.++.+
T Consensus 313 ~~~~~~lv~G~s~giG~~~a~~l~-----~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~~~~~~~~~ 386 (582)
T PRK05855 313 FSGKLVVVTGAGSGIGRETALAFA-----REGAEVVASDIDEAAAERTAELIRAAGAVAH-AYRVDVSDADAMEAFAEWV 386 (582)
T ss_pred CCCCEEEEECCcCHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCeEE-EEEcCCCCHHHHHHHHHHH
Confidence 345789999999999999999999 69999999999764311 1124678 8999999999888877664
Q ss_pred cc---ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeee
Q 028258 80 SQ---EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYM 138 (211)
Q Consensus 80 ~~---~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~ 138 (211)
.. .+|++||+|+.... ++...+++|+.++.++.+++...+.....-.+|+++||...|.
T Consensus 387 ~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~ 457 (582)
T PRK05855 387 RAEHGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYA 457 (582)
T ss_pred HHhcCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhcc
Confidence 21 38999999987421 3445678999998888887654321111124788888876654
|
|
| >PRK06139 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=6.6e-13 Score=112.25 Aligned_cols=123 Identities=15% Similarity=-0.062 Sum_probs=87.4
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
+.+|+++||||||+||++++++|+ ++|++|++++|+++... .....+. ++.+|++|++++.+.++.+
T Consensus 5 l~~k~vlITGAs~GIG~aia~~la-----~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~-~~~~Dv~d~~~v~~~~~~~ 78 (330)
T PRK06139 5 LHGAVVVITGASSGIGQATAEAFA-----RRGARLVLAARDEEALQAVAEECRALGAEVL-VVPTDVTDADQVKALATQA 78 (330)
T ss_pred CCCCEEEEcCCCCHHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHHHhcCCcEE-EEEeeCCCHHHHHHHHHHH
Confidence 346899999999999999999999 69999999999765321 0124567 7899999999888777654
Q ss_pred c---cccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCee
Q 028258 80 S---QEITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKH 136 (211)
Q Consensus 80 ~---~~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~ 136 (211)
. ..+|++||+|+.... .+...+++|+.++.++.+++...+... +..+++.++|...
T Consensus 79 ~~~~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~-~~g~iV~isS~~~ 146 (330)
T PRK06139 79 ASFGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQ-GHGIFINMISLGG 146 (330)
T ss_pred HHhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHc-CCCEEEEEcChhh
Confidence 2 138999999975321 234567899998888777664322101 2246777766443
|
|
| >PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=7.1e-13 Score=107.67 Aligned_cols=123 Identities=12% Similarity=0.047 Sum_probs=88.5
Q ss_pred CCCeEEEEcCCC--hHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC--------C----------CCCCCceeEEEeeCC
Q 028258 8 PKSVALIIGVTG--ISGLSLAEALKNPTTPGSPWKVYGAARRPPPG--------W----------FPTALVDRYITFDAL 67 (211)
Q Consensus 8 ~~~~ilVtGatG--~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~--------~----------~~~~~~~~~i~~Dl~ 67 (211)
++|++||||||| +||++++++|+ +.|++|+++.|++.+. . .....++ ++.+|++
T Consensus 4 ~~k~vlItGas~~~giG~~la~~l~-----~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~ 77 (256)
T PRK12748 4 MKKIALVTGASRLNGIGAAVCRRLA-----AKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCE-HMEIDLS 77 (256)
T ss_pred CCcEEEEeCCCCCCCHHHHHHHHHH-----HcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEE-EEECCCC
Confidence 568999999995 79999999999 6899999999873210 0 0123578 9999999
Q ss_pred CHHHHHHHHHhccc---ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 68 DPTDTALKLSLISQ---EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 68 d~~~~~~~~~~~~~---~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
|.+++...++.+.. .+|+|||+++.... ++...+++|+.++.++++++...+. .....+|+++||..
T Consensus 78 ~~~~~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~iv~~ss~~ 156 (256)
T PRK12748 78 QPYAPNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYD-GKAGGRIINLTSGQ 156 (256)
T ss_pred CHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhh-hcCCeEEEEECCcc
Confidence 99988777765421 38999999976321 2344578999999999988765321 11235788888764
Q ss_pred ee
Q 028258 136 HY 137 (211)
Q Consensus 136 ~y 137 (211)
.+
T Consensus 157 ~~ 158 (256)
T PRK12748 157 SL 158 (256)
T ss_pred cc
Confidence 44
|
|
| >COG2910 Putative NADH-flavin reductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.4e-12 Score=99.16 Aligned_cols=156 Identities=15% Similarity=0.131 Sum_probs=104.8
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccceEEee
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITNLFWV 89 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~~~ 89 (211)
++|.|+||||.+|++|+++++ .+||+|+++.|++.+... .+++. .++.|+.|++++.+.+.+. |.||..
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~-----~RGHeVTAivRn~~K~~~-~~~~~-i~q~Difd~~~~a~~l~g~----DaVIsA 69 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEAL-----KRGHEVTAIVRNASKLAA-RQGVT-ILQKDIFDLTSLASDLAGH----DAVISA 69 (211)
T ss_pred CeEEEEecCchhHHHHHHHHH-----hCCCeeEEEEeChHhccc-cccce-eecccccChhhhHhhhcCC----ceEEEe
Confidence 368899999999999999999 699999999999987542 26777 8899999999998888884 555544
Q ss_pred cccCCchhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe-eeecccCCccccCCCCCCCCCCcCCCCCCCCCC
Q 028258 90 PLQVQESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK-HYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPN 168 (211)
Q Consensus 90 a~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~-~y~~~~~~~~~~g~~~~~~~~~~e~~~~~~~~~ 168 (211)
-+....+....+ ......|++.++.+ ++.|++.+.|+. -|..+ | -.-.++| +.|.
T Consensus 70 ~~~~~~~~~~~~---~k~~~~li~~l~~a-----gv~RllVVGGAGSL~id~-------g-------~rLvD~p--~fP~ 125 (211)
T COG2910 70 FGAGASDNDELH---SKSIEALIEALKGA-----GVPRLLVVGGAGSLEIDE-------G-------TRLVDTP--DFPA 125 (211)
T ss_pred ccCCCCChhHHH---HHHHHHHHHHHhhc-----CCeeEEEEcCccceEEcC-------C-------ceeecCC--CCch
Confidence 333322333322 12245677777765 678887777643 23221 1 1122333 2334
Q ss_pred cchh----HHHHHhh--cCCCceEEEecCCceEecCCC
Q 028258 169 FYYE----LEDVSAS--YSPAITYSVHRSSVIIGASPR 200 (211)
Q Consensus 169 ~~~~----~e~~l~~--~~~~~~~~i~Rp~~i~G~~~~ 200 (211)
.|+. +.+.|.. +..+++||-+-|+.+|-|+.+
T Consensus 126 ey~~~A~~~ae~L~~Lr~~~~l~WTfvSPaa~f~PGer 163 (211)
T COG2910 126 EYKPEALAQAEFLDSLRAEKSLDWTFVSPAAFFEPGER 163 (211)
T ss_pred hHHHHHHHHHHHHHHHhhccCcceEEeCcHHhcCCccc
Confidence 4443 2333333 356699999999999999773
|
|
| >PRK06483 dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.4e-12 Score=104.68 Aligned_cols=121 Identities=15% Similarity=0.022 Sum_probs=86.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC--CCCCCceeEEEeeCCCHHHHHHHHHhccc---c
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW--FPTALVDRYITFDALDPTDTALKLSLISQ---E 82 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~--~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~---~ 82 (211)
|+|++|||||+|+||++++++|+ ++|++|++++|++.+.. ....+++ ++.+|++|++++.+.++.+.. .
T Consensus 1 ~~k~vlItGas~gIG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~~ 74 (236)
T PRK06483 1 MPAPILITGAGQRIGLALAWHLL-----AQGQPVIVSYRTHYPAIDGLRQAGAQ-CIQADFSTNAGIMAFIDELKQHTDG 74 (236)
T ss_pred CCceEEEECCCChHHHHHHHHHH-----HCCCeEEEEeCCchhHHHHHHHcCCE-EEEcCCCCHHHHHHHHHHHHhhCCC
Confidence 56899999999999999999999 68999999999765321 1123467 899999999988887766531 3
Q ss_pred cceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCC-CceEEEEeecC
Q 028258 83 ITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRS-RLRHVALLTGT 134 (211)
Q Consensus 83 ~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~~~~~s~~ 134 (211)
+|++||+++... .++...+++|+.++..+.+.+...+.... +..+++++||.
T Consensus 75 id~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~ 136 (236)
T PRK06483 75 LRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDY 136 (236)
T ss_pred ccEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcch
Confidence 899999997531 13455678898888777666655321111 12467777653
|
|
| >PRK07109 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=8.8e-13 Score=111.65 Aligned_cols=123 Identities=12% Similarity=-0.054 Sum_probs=86.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHhcc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSLIS 80 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~ 80 (211)
.+|+++||||||+||++++++|+ ++|++|++++|++.... ....++. ++.+|++|++++.++++.+.
T Consensus 7 ~~k~vlITGas~gIG~~la~~la-----~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~-~v~~Dv~d~~~v~~~~~~~~ 80 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFA-----RRGAKVVLLARGEEGLEALAAEIRAAGGEAL-AVVADVADAEAVQAAADRAE 80 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHHHHcCCcEE-EEEecCCCHHHHHHHHHHHH
Confidence 45899999999999999999999 68999999999764311 0134577 88999999998888776542
Q ss_pred c---ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeee
Q 028258 81 Q---EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 137 (211)
Q Consensus 81 ~---~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y 137 (211)
. .+|++||+++.... .+...+++|+.+..++...+...+... +..+|+++||...|
T Consensus 81 ~~~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~-~~g~iV~isS~~~~ 148 (334)
T PRK07109 81 EELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPR-DRGAIIQVGSALAY 148 (334)
T ss_pred HHCCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEeCChhhc
Confidence 1 38999999986321 234456788776655544443321101 23678888886554
|
|
| >TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.2e-12 Score=106.82 Aligned_cols=119 Identities=11% Similarity=-0.045 Sum_probs=86.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC----CCCCCceeEEEeeCCCHHHHHHHHHhcc---
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW----FPTALVDRYITFDALDPTDTALKLSLIS--- 80 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~----~~~~~~~~~i~~Dl~d~~~~~~~~~~~~--- 80 (211)
.+|+++||||||+||++++++|+ ++|++|++++|+..... .....+. .+.+|++|.+++.++++.+.
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~-----~~G~~V~~~~r~~~~~~~l~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~ 77 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFV-----AEGARVAVLDKSAAGLQELEAAHGDAVV-GVEGDVRSLDDHKEAVARCVAAF 77 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHhhcCCceE-EEEeccCCHHHHHHHHHHHHHHh
Confidence 46899999999999999999999 68999999999764311 1124577 88999999988777766542
Q ss_pred cccceEEeecccCC--------c------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 81 QEITNLFWVPLQVQ--------E------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 81 ~~~~~v~~~a~~~~--------~------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
..+|++||+|+... . .+...+++|+.++.++++++.+.+... + .++++++|.
T Consensus 78 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~-g~iv~~sS~ 143 (262)
T TIGR03325 78 GKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVAS-R-GSVIFTISN 143 (262)
T ss_pred CCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhc-C-CCEEEEecc
Confidence 12899999997421 0 244678999999999998887653111 1 345666553
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. |
| >PRK07097 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.2e-12 Score=107.03 Aligned_cols=120 Identities=13% Similarity=-0.013 Sum_probs=87.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----C--CCCCceeEEEeeCCCHHHHHHHHHhcc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----F--PTALVDRYITFDALDPTDTALKLSLIS 80 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----~--~~~~~~~~i~~Dl~d~~~~~~~~~~~~ 80 (211)
.+|+++||||+|+||++++++|+ +.|++|++++|++.+.. . ...++. ++.+|++|++++.+++..+.
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~-----~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~ 82 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYA-----KAGATIVFNDINQELVDKGLAAYRELGIEAH-GYVCDVTDEDGVQAMVSQIE 82 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHH-----HCCCeEEEEeCCHHHHHHHHHHHHhcCCceE-EEEcCCCCHHHHHHHHHHHH
Confidence 46899999999999999999999 68999999988765311 0 123577 89999999998888776542
Q ss_pred c---ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 81 Q---EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 81 ~---~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
. .+|++||+++.... .+...+++|..++..+.+++...+... +..+|+++||.
T Consensus 83 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~isS~ 147 (265)
T PRK07097 83 KEVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKK-GHGKIINICSM 147 (265)
T ss_pred HhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc-CCcEEEEEcCc
Confidence 1 28999999986431 344567889988877777665432101 34577777763
|
|
| >TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Probab=99.48 E-value=9.8e-13 Score=105.23 Aligned_cols=117 Identities=19% Similarity=0.072 Sum_probs=85.9
Q ss_pred EEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC---C-----CCCCCceeEEEeeCCCHHHHHHHHHhccc--
Q 028258 12 ALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG---W-----FPTALVDRYITFDALDPTDTALKLSLISQ-- 81 (211)
Q Consensus 12 ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~---~-----~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~-- 81 (211)
+||||++|+||++++++|+ ++|++|++++|+.... . .....++ ++.+|++|++++.+.++++..
T Consensus 1 vlItG~~g~iG~~la~~l~-----~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~ 74 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLA-----KEGAKVIITYRSSEEGAEEVVEELKAYGVKAL-GVVCDVSDREDVKAVVEEIEEEL 74 (239)
T ss_pred CEEECCCcHHHHHHHHHHH-----HCCCEEEEEeCCchhHHHHHHHHHHhcCCceE-EEEecCCCHHHHHHHHHHHHHHh
Confidence 5899999999999999999 6899999999875321 0 0123577 899999999988888766421
Q ss_pred -ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 82 -EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 82 -~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
.+|.|+|+++... ..+...+++|+.++.++++++...+. ..+..+|+++||..
T Consensus 75 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~~v~~sS~~ 137 (239)
T TIGR01830 75 GPIDILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMI-KQRSGRIINISSVV 137 (239)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-hcCCeEEEEECCcc
Confidence 2799999998743 13445678999999999888765310 01345788888753
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis. |
| >PRK07677 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.6e-12 Score=105.36 Aligned_cols=120 Identities=13% Similarity=-0.012 Sum_probs=87.8
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----C--CCCCceeEEEeeCCCHHHHHHHHHhcc-
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----F--PTALVDRYITFDALDPTDTALKLSLIS- 80 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----~--~~~~~~~~i~~Dl~d~~~~~~~~~~~~- 80 (211)
+|+++||||+|+||++++++|+ +.|++|++++|+..... . ....+. ++.+|++|++++.+.++.+.
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~-----~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~ 74 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFA-----EEGANVVITGRTKEKLEEAKLEIEQFPGQVL-TVQMDVRNPEDVQKMVEQIDE 74 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEE-EEEecCCCHHHHHHHHHHHHH
Confidence 3789999999999999999999 68999999999765311 0 124678 89999999998877776542
Q ss_pred --cccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 81 --QEITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 81 --~~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
..+|++||+++... ..+...+++|+.++.++++++.+.+.....-.+++++||.
T Consensus 75 ~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~ 139 (252)
T PRK07677 75 KFGRIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVAT 139 (252)
T ss_pred HhCCccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcCh
Confidence 12899999987421 1345678999999999998885432001113577777764
|
|
| >PRK07832 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=2.2e-12 Score=105.81 Aligned_cols=120 Identities=13% Similarity=0.007 Sum_probs=84.7
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCC-CCceeEEEeeCCCHHHHHHHHHhcc-
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPT-ALVDRYITFDALDPTDTALKLSLIS- 80 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~-~~~~~~i~~Dl~d~~~~~~~~~~~~- 80 (211)
|+++||||||+||++++++|+ +.|++|++++|+++... ... ..+. ++.+|++|++++.+.++.+.
T Consensus 1 k~vlItGas~giG~~la~~la-----~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~ 74 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLA-----AQGAELFLTDRDADGLAQTVADARALGGTVPE-HRALDISDYDAVAAFAADIHA 74 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCCcce-EEEeeCCCHHHHHHHHHHHHH
Confidence 479999999999999999999 68999999998764310 011 2234 67899999988777665542
Q ss_pred --cccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 81 --QEITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 81 --~~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
..+|++||+++... .++...+++|+.++.++++++...+.......+|+++||..
T Consensus 75 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~ 140 (272)
T PRK07832 75 AHGSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAA 140 (272)
T ss_pred hcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEcccc
Confidence 12899999997532 13455679999999999988764321011235778887743
|
|
| >PRK07069 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.46 E-value=2.8e-12 Score=103.48 Aligned_cols=116 Identities=15% Similarity=0.033 Sum_probs=82.9
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCC-CCCCC-----C-C---CCCceeEEEeeCCCHHHHHHHHHhcc
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR-PPPGW-----F-P---TALVDRYITFDALDPTDTALKLSLIS 80 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~-~~~~~-----~-~---~~~~~~~i~~Dl~d~~~~~~~~~~~~ 80 (211)
+++||||+|+||+++++.|+ ++|++|++++|+ .+... . . ...+. .+.+|++|++++.++++.+.
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~-----~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~ 74 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMA-----EQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAF-AAVQDVTDEAQWQALLAQAA 74 (251)
T ss_pred CEEEECCCChHHHHHHHHHH-----HCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEE-EEEeecCCHHHHHHHHHHHH
Confidence 38999999999999999999 689999999987 33210 0 0 11234 57899999998887776542
Q ss_pred c---ccceEEeecccCCc---------hhHHHHhhcHH----HHHHHHHHHHhcCCCCCCceEEEEeecCeee
Q 028258 81 Q---EITNLFWVPLQVQE---------SEEVNIFKNST----MLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 137 (211)
Q Consensus 81 ~---~~~~v~~~a~~~~~---------~~~~~~~~n~~----~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y 137 (211)
. .+|++||+++.... ++...+++|+. +++.+++.+.+. +.++|+++||...+
T Consensus 75 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~~~ii~~ss~~~~ 142 (251)
T PRK07069 75 DAMGGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRAS-----QPASIVNISSVAAF 142 (251)
T ss_pred HHcCCccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhc-----CCcEEEEecChhhc
Confidence 1 27999999986431 23445678887 666677776654 35788888876554
|
|
| >PRK09072 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.2e-12 Score=106.72 Aligned_cols=120 Identities=17% Similarity=0.033 Sum_probs=87.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC------CCCCCceeEEEeeCCCHHHHHHHHHhcc-
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW------FPTALVDRYITFDALDPTDTALKLSLIS- 80 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~- 80 (211)
.++++|||||+|+||++++++|+ ++|++|++++|++.... ....+++ ++.+|++|++++...++.+.
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~D~~d~~~~~~~~~~~~~ 77 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALA-----AAGARLLLVGRNAEKLEALAARLPYPGRHR-WVVADLTSEAGREAVLARARE 77 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHHhcCCceE-EEEccCCCHHHHHHHHHHHHh
Confidence 46889999999999999999999 68999999999764311 0124678 99999999988777665442
Q ss_pred -cccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 81 -QEITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 81 -~~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
..+|.+||+++.... .....+++|+.++.++++.+...+... +..+++++||.
T Consensus 78 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-~~~~iv~isS~ 140 (263)
T PRK09072 78 MGGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQ-PSAMVVNVGST 140 (263)
T ss_pred cCCCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-CCCEEEEecCh
Confidence 138999999986421 234567899999888888876532101 23456766663
|
|
| >TIGR02415 23BDH acetoin reductases | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.8e-12 Score=104.84 Aligned_cols=119 Identities=12% Similarity=-0.031 Sum_probs=84.1
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHhccc-
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSLISQ- 81 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~- 81 (211)
|+++||||+|+||++++++|+ +.|++|+++.|++.... .....+. ++.+|++|++++.++++.+..
T Consensus 1 k~~lItG~sg~iG~~la~~l~-----~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~-~~~~Dl~~~~~i~~~~~~~~~~ 74 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLA-----KDGFAVAVADLNEETAKETAKEINQAGGKAV-AYKLDVSDKDQVFSAIDQAAEK 74 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCeEE-EEEcCCCCHHHHHHHHHHHHHH
Confidence 579999999999999999999 68999999998754210 1134577 899999999988777665421
Q ss_pred --ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 82 --EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 82 --~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
.+|++||+++... .++...+++|+.++..+++++...+.......+++++||.
T Consensus 75 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~ 138 (254)
T TIGR02415 75 FGGFDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASI 138 (254)
T ss_pred cCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecch
Confidence 2799999997632 1344567899988877766655432101112577777664
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733). |
| >PRK06924 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=2.6e-12 Score=103.85 Aligned_cols=119 Identities=14% Similarity=0.061 Sum_probs=81.4
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC-----CCCCCCceeEEEeeCCCHHHHHHHHHhcccc--
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-----WFPTALVDRYITFDALDPTDTALKLSLISQE-- 82 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~-----~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~-- 82 (211)
|++|||||||+||++++++|+ ++|++|++++|++.+. .....+++ ++.+|++|++++.+.++.+...
T Consensus 2 k~vlItGasggiG~~ia~~l~-----~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~ 75 (251)
T PRK06924 2 RYVIITGTSQGLGEAIANQLL-----EKGTHVISISRTENKELTKLAEQYNSNLT-FHSLDLQDVHELETNFNEILSSIQ 75 (251)
T ss_pred cEEEEecCCchHHHHHHHHHH-----hcCCEEEEEeCCchHHHHHHHhccCCceE-EEEecCCCHHHHHHHHHHHHHhcC
Confidence 689999999999999999999 6899999999976321 11235688 8999999999888877654210
Q ss_pred -----cceEEeecccCC----------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 83 -----ITNLFWVPLQVQ----------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 83 -----~~~v~~~a~~~~----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
.++++++++... ..+...+++|+.+...+++.+...+.......+|+++||.
T Consensus 76 ~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~ 142 (251)
T PRK06924 76 EDNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSG 142 (251)
T ss_pred cccCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecch
Confidence 126788876532 1244567888887655555554332101123577887774
|
|
| >KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.45 E-value=2.5e-12 Score=105.22 Aligned_cols=129 Identities=16% Similarity=0.011 Sum_probs=93.9
Q ss_pred ccccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC--------CCCC-CceeEEEeeCCCHHHH
Q 028258 2 EKQDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW--------FPTA-LVDRYITFDALDPTDT 72 (211)
Q Consensus 2 ~~~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~--------~~~~-~~~~~i~~Dl~d~~~~ 72 (211)
..|..+.+|+|+|||||++||.+++.+|. +.|.+++.+.|+..+.. .... ++. ++.+|++|.+++
T Consensus 5 ~~~e~~~~kvVvITGASsGIG~~lA~~la-----~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~-~~~~Dvs~~~~~ 78 (282)
T KOG1205|consen 5 LFMERLAGKVVLITGASSGIGEALAYELA-----KRGAKLVLVARRARRLERVAEELRKLGSLEKVL-VLQLDVSDEESV 78 (282)
T ss_pred ccHHHhCCCEEEEeCCCcHHHHHHHHHHH-----hCCCceEEeehhhhhHHHHHHHHHHhCCcCccE-EEeCccCCHHHH
Confidence 35666778999999999999999999999 69998777777654311 1112 588 999999999998
Q ss_pred HHHHHhccc---ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeee
Q 028258 73 ALKLSLISQ---EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 137 (211)
Q Consensus 73 ~~~~~~~~~---~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y 137 (211)
.++++.+.. .+|+++|.||.... +....+++|+.|+-.+..++...+... +-.||+.+||..-+
T Consensus 79 ~~~~~~~~~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r-~~GhIVvisSiaG~ 154 (282)
T KOG1205|consen 79 KKFVEWAIRHFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKR-NDGHIVVISSIAGK 154 (282)
T ss_pred HHHHHHHHHhcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhc-CCCeEEEEeccccc
Confidence 888744321 39999999987542 223467899988777777776654211 13688888886543
|
|
| >PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.45 E-value=3.2e-12 Score=103.78 Aligned_cols=121 Identities=8% Similarity=-0.091 Sum_probs=88.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHhcc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSLIS 80 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~ 80 (211)
++|++|||||+|+||++++++|+ ++|++|++++|+..... ....++. ++.+|++|.+++.++++.+.
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~-----~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~-~~~~D~~~~~~i~~~~~~~~ 83 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFA-----TAGASVVVSDINADAANHVVDEIQQLGGQAF-ACRCDITSEQELSALADFAL 83 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHH-----HCCCeEEEEeCCHHHHHHHHHHHHhcCCcEE-EEEccCCCHHHHHHHHHHHH
Confidence 46899999999999999999999 68999999988754311 0123567 88999999998877766542
Q ss_pred c---ccceEEeecccCC--------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 81 Q---EITNLFWVPLQVQ--------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 81 ~---~~~~v~~~a~~~~--------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
. .+|++||+++... ..+...+++|+.++.++++++...+... +..+++++||..
T Consensus 84 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~isS~~ 148 (255)
T PRK06113 84 SKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKN-GGGVILTITSMA 148 (255)
T ss_pred HHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhc-CCcEEEEEeccc
Confidence 1 2899999998632 1334457899999999998886432101 224778887743
|
|
| >PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=3.8e-12 Score=103.75 Aligned_cols=124 Identities=8% Similarity=-0.071 Sum_probs=83.8
Q ss_pred ccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC-C-----C---CCCCCceeEEEeeCCCHHHHHH
Q 028258 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP-G-----W---FPTALVDRYITFDALDPTDTAL 74 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~-~-----~---~~~~~~~~~i~~Dl~d~~~~~~ 74 (211)
|..+++|++|||||+++||++++++|+ +.|++|+++.|+... . . .....+. ++.+|++|++++.+
T Consensus 3 ~~~l~~k~vlItGas~gIG~~ia~~l~-----~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~ 76 (260)
T PRK08416 3 SNEMKGKTLVISGGTRGIGKAIVYEFA-----QSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAK-AYPLNILEPETYKE 76 (260)
T ss_pred ccccCCCEEEEeCCCchHHHHHHHHHH-----HCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceE-EEEcCCCCHHHHHH
Confidence 334457999999999999999999999 699999888764321 1 0 0124577 89999999998888
Q ss_pred HHHhccc---ccceEEeecccCC---------------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 75 KLSLISQ---EITNLFWVPLQVQ---------------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 75 ~~~~~~~---~~~~v~~~a~~~~---------------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
.++.+.. .+|+++|+|+... ..+...+++|+.+...+.+.+...+... +-.+|+++||.
T Consensus 77 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~isS~ 153 (260)
T PRK08416 77 LFKKIDEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKV-GGGSIISLSST 153 (260)
T ss_pred HHHHHHHhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhcc-CCEEEEEEecc
Confidence 7776531 3899999996421 1233456777776655555544332101 23578888774
|
|
| >PRK07041 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=9.1e-13 Score=105.16 Aligned_cols=113 Identities=14% Similarity=0.064 Sum_probs=87.1
Q ss_pred EEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----C-CCCCceeEEEeeCCCHHHHHHHHHhcccccceE
Q 028258 13 LIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----F-PTALVDRYITFDALDPTDTALKLSLISQEITNL 86 (211)
Q Consensus 13 lVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----~-~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v 86 (211)
|||||+|+||++++++|+ ++|++|++++|++.... . ...+++ ++.+|++|++++.++++.... +|++
T Consensus 1 lItGas~~iG~~~a~~l~-----~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~-id~l 73 (230)
T PRK07041 1 LVVGGSSGIGLALARAFA-----AEGARVTIASRSRDRLAAAARALGGGAPVR-TAALDITDEAAVDAFFAEAGP-FDHV 73 (230)
T ss_pred CeecCCChHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHhcCCceE-EEEccCCCHHHHHHHHHhcCC-CCEE
Confidence 699999999999999999 68999999999754311 0 134678 899999999999999887654 8999
Q ss_pred EeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeee
Q 028258 87 FWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 137 (211)
Q Consensus 87 ~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y 137 (211)
||+++... .++...+++|+.++.+++++.... +..+|+++||...|
T Consensus 74 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~g~iv~~ss~~~~ 128 (230)
T PRK07041 74 VITAADTPGGPVRALPLAAAQAAMDSKFWGAYRVARAARIA-----PGGSLTFVSGFAAV 128 (230)
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhc-----CCeEEEEECchhhc
Confidence 99997632 134556789999998988854432 35788888876544
|
|
| >TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.44 E-value=3.1e-12 Score=102.59 Aligned_cols=118 Identities=13% Similarity=0.092 Sum_probs=83.0
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC-CC--C-----CCCCCceeEEEeeCCCHHHHHHHHHhcc-
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP-PG--W-----FPTALVDRYITFDALDPTDTALKLSLIS- 80 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~-~~--~-----~~~~~~~~~i~~Dl~d~~~~~~~~~~~~- 80 (211)
|++|||||||+||++++++|+ +.|++|+++.|+.. .. + ....++. ++.+|++|++++.++++.+.
T Consensus 1 k~~lItG~sg~iG~~la~~l~-----~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~ 74 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLA-----KDGYRVAANCGPNEERAEAWLQEQGALGFDFR-VVEGDVSSFESCKAAVAKVEA 74 (242)
T ss_pred CEEEEECCCChHHHHHHHHHH-----HCCCEEEEEeCCCHHHHHHHHHHHHhhCCceE-EEEecCCCHHHHHHHHHHHHH
Confidence 679999999999999999999 68999999888322 11 0 0124678 89999999988877776542
Q ss_pred --cccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 81 --QEITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 81 --~~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
..+|+|||+++.... ++...+++|+.++..+++++...+. ..+..+|+++||.
T Consensus 75 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~~~iv~iss~ 138 (242)
T TIGR01829 75 ELGPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMR-ERGWGRIINISSV 138 (242)
T ss_pred HcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-hcCCcEEEEEcch
Confidence 138999999975321 3445678898887776555443210 1134678888764
|
(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. |
| >PRK08324 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.43 E-value=1.5e-12 Score=119.87 Aligned_cols=122 Identities=15% Similarity=0.009 Sum_probs=89.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----C-CCCCceeEEEeeCCCHHHHHHHHHhcc-
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----F-PTALVDRYITFDALDPTDTALKLSLIS- 80 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----~-~~~~~~~~i~~Dl~d~~~~~~~~~~~~- 80 (211)
.+|++|||||+|+||++++++|+ +.|++|++++|++.... . ....+. ++.+|++|++++.++++.+.
T Consensus 421 ~gk~vLVTGasggIG~~la~~L~-----~~Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~-~v~~Dvtd~~~v~~~~~~~~~ 494 (681)
T PRK08324 421 AGKVALVTGAAGGIGKATAKRLA-----AEGACVVLADLDEEAAEAAAAELGGPDRAL-GVACDVTDEAAVQAAFEEAAL 494 (681)
T ss_pred CCCEEEEecCCCHHHHHHHHHHH-----HCcCEEEEEeCCHHHHHHHHHHHhccCcEE-EEEecCCCHHHHHHHHHHHHH
Confidence 46899999999999999999999 68999999999865311 0 113678 89999999998887776541
Q ss_pred --cccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCc-eEEEEeecCee
Q 028258 81 --QEITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRL-RHVALLTGTKH 136 (211)
Q Consensus 81 --~~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~-~~~~~~s~~~~ 136 (211)
..+|+|||+++... ..+...+++|+.++.++++++...+... +. .+|+++||...
T Consensus 495 ~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~-~~~g~iV~vsS~~~ 561 (681)
T PRK08324 495 AFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQ-GLGGSIVFIASKNA 561 (681)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCcEEEEECCccc
Confidence 12899999998532 1355677899999888877765432111 22 57788777543
|
|
| >PRK06079 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=3.9e-12 Score=103.38 Aligned_cols=118 Identities=11% Similarity=-0.017 Sum_probs=85.8
Q ss_pred CCCeEEEEcCC--ChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC----CCCCCCceeEEEeeCCCHHHHHHHHHhcc-
Q 028258 8 PKSVALIIGVT--GISGLSLAEALKNPTTPGSPWKVYGAARRPPPG----WFPTALVDRYITFDALDPTDTALKLSLIS- 80 (211)
Q Consensus 8 ~~~~ilVtGat--G~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~----~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~- 80 (211)
++|+++||||+ +.||++++++|+ ++|++|+++.|+.... ......+. ++.+|++|++++.++++.+.
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la-----~~G~~Vi~~~r~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~v~~~~~~~~~ 79 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIK-----DQGATVIYTYQNDRMKKSLQKLVDEEDL-LVECDVASDESIERAFATIKE 79 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHH-----HCCCEEEEecCchHHHHHHHhhccCcee-EEeCCCCCHHHHHHHHHHHHH
Confidence 36899999999 799999999999 6899999998863210 01124577 89999999998877766542
Q ss_pred --cccceEEeecccCC-------------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 81 --QEITNLFWVPLQVQ-------------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 81 --~~~~~v~~~a~~~~-------------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
..+|++||+|+... .++...+++|+.+...+.+++...+. +-.+++++||.
T Consensus 80 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~---~~g~Iv~iss~ 145 (252)
T PRK06079 80 RVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLN---PGASIVTLTYF 145 (252)
T ss_pred HhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcc---cCceEEEEecc
Confidence 13899999987531 13455678999988888888776532 11466776653
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=1.9e-12 Score=118.48 Aligned_cols=124 Identities=16% Similarity=0.024 Sum_probs=90.8
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
+.+|+++||||||+||++++++|+ ++|++|++++|++.... .....+. ++.+|++|.+++.++++.+
T Consensus 369 ~~~k~vlItGas~giG~~la~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~~~~~~~~~ 442 (657)
T PRK07201 369 LVGKVVLITGASSGIGRATAIKVA-----EAGATVFLVARNGEALDELVAEIRAKGGTAH-AYTCDLTDSAAVDHTVKDI 442 (657)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHHHhcCCcEE-EEEecCCCHHHHHHHHHHH
Confidence 346899999999999999999999 68999999999765311 0134678 8999999999888877654
Q ss_pred cc---ccceEEeecccCC-----------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeee
Q 028258 80 SQ---EITNLFWVPLQVQ-----------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 137 (211)
Q Consensus 80 ~~---~~~~v~~~a~~~~-----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y 137 (211)
.. .+|++||+|+... .++...+++|+.++.+++.++...+. ..+..+|+++||...|
T Consensus 443 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-~~~~g~iv~isS~~~~ 513 (657)
T PRK07201 443 LAEHGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMR-ERRFGHVVNVSSIGVQ 513 (657)
T ss_pred HHhcCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhh-hcCCCEEEEECChhhc
Confidence 21 2899999998531 12345678999988887776654321 1134688888886555
|
|
| >PRK08936 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=5.8e-12 Score=102.61 Aligned_cols=121 Identities=11% Similarity=-0.112 Sum_probs=81.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC--------CCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW--------FPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~--------~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
..|++|||||+|+||++++++|+ ++|++|+++.|+..... ....++. ++.+|++|.+++.+.++.+
T Consensus 6 ~~k~~lItGa~~gIG~~ia~~l~-----~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~-~~~~Dl~~~~~i~~~~~~~ 79 (261)
T PRK08936 6 EGKVVVITGGSTGLGRAMAVRFG-----KEKAKVVINYRSDEEEANDVAEEIKKAGGEAI-AVKGDVTVESDVVNLIQTA 79 (261)
T ss_pred CCCEEEEeCCCChHHHHHHHHHH-----HCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEE-EEEecCCCHHHHHHHHHHH
Confidence 46899999999999999999999 68999988888543210 0124567 8899999999887776654
Q ss_pred c---cccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 80 S---QEITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 80 ~---~~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
. ..+|++||+++.... .+...+++|+.++..+...+...+.....-.+++++||.
T Consensus 80 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~ 146 (261)
T PRK08936 80 VKEFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSV 146 (261)
T ss_pred HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccc
Confidence 2 138999999986321 244567889877655544433221001112467777764
|
|
| >PRK07831 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=4.5e-12 Score=103.31 Aligned_cols=120 Identities=9% Similarity=-0.090 Sum_probs=84.9
Q ss_pred CCCeEEEEcCCC-hHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC---------CCCCCceeEEEeeCCCHHHHHHHHH
Q 028258 8 PKSVALIIGVTG-ISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW---------FPTALVDRYITFDALDPTDTALKLS 77 (211)
Q Consensus 8 ~~~~ilVtGatG-~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~---------~~~~~~~~~i~~Dl~d~~~~~~~~~ 77 (211)
.+|+++||||+| .||+++++.|+ ++|++|++++|+..+.. .....+. ++.+|+++++++.++++
T Consensus 16 ~~k~vlItG~sg~gIG~~ia~~l~-----~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~ 89 (262)
T PRK07831 16 AGKVVLVTAAAGTGIGSATARRAL-----EEGARVVISDIHERRLGETADELAAELGLGRVE-AVVCDVTSEAQVDALID 89 (262)
T ss_pred CCCEEEEECCCcccHHHHHHHHHH-----HcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEE-EEEccCCCHHHHHHHHH
Confidence 468999999997 79999999999 68999999988764311 0113577 88999999988887776
Q ss_pred hcc---cccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeec
Q 028258 78 LIS---QEITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTG 133 (211)
Q Consensus 78 ~~~---~~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~ 133 (211)
.+. ..+|.+||+++... ..+...+++|+.++..+++++...+.....-.++++++|
T Consensus 90 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss 157 (262)
T PRK07831 90 AAVERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNAS 157 (262)
T ss_pred HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCc
Confidence 542 12899999998632 134556788999888887776643210111245666555
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.42 E-value=3e-12 Score=114.21 Aligned_cols=118 Identities=12% Similarity=-0.073 Sum_probs=89.5
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC----CCCCCceeEEEeeCCCHHHHHHHHHhccc---
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW----FPTALVDRYITFDALDPTDTALKLSLISQ--- 81 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~----~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~--- 81 (211)
+|++|||||+|+||++++++|+ ++|++|++++|++.+.. .....+. .+.+|++|++++.+.++.+..
T Consensus 269 ~k~~lItGas~gIG~~~a~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~g 342 (520)
T PRK06484 269 PRVVAITGGARGIGRAVADRFA-----AAGDRLLIIDRDAEGAKKLAEALGDEHL-SVQADITDEAAVESAFAQIQARWG 342 (520)
T ss_pred CCEEEEECCCcHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHhCCcee-EEEccCCCHHHHHHHHHHHHHHcC
Confidence 6899999999999999999999 69999999999764321 0124566 789999999988877765421
Q ss_pred ccceEEeecccCC----------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 82 EITNLFWVPLQVQ----------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 82 ~~~~v~~~a~~~~----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
.+|++||+|+... .++...+++|+.++.++.+++...+ .+-.+|+++||..
T Consensus 343 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~---~~~g~iv~isS~~ 403 (520)
T PRK06484 343 RLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLM---SQGGVIVNLGSIA 403 (520)
T ss_pred CCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHh---ccCCEEEEECchh
Confidence 3899999998631 1345678999999999998887653 1225788887753
|
|
| >PRK05884 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=4.2e-12 Score=101.42 Aligned_cols=114 Identities=15% Similarity=0.055 Sum_probs=84.9
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC--CCCCCceeEEEeeCCCHHHHHHHHHhcccccceEEe
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW--FPTALVDRYITFDALDPTDTALKLSLISQEITNLFW 88 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~--~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~~ 88 (211)
+++||||+|+||++++++|+ ++|++|++++|+.++.. ....+++ ++.+|++|++++.+.++.+...+|.+||
T Consensus 2 ~vlItGas~giG~~ia~~l~-----~~g~~v~~~~r~~~~~~~~~~~~~~~-~~~~D~~~~~~v~~~~~~~~~~id~lv~ 75 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFR-----NDGHKVTLVGARRDDLEVAAKELDVD-AIVCDNTDPASLEEARGLFPHHLDTIVN 75 (223)
T ss_pred eEEEEeCCchHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHhccCc-EEecCCCCHHHHHHHHHHHhhcCcEEEE
Confidence 59999999999999999999 68999999999765321 0112467 8999999999988887765323799999
Q ss_pred ecccC--------------CchhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeec
Q 028258 89 VPLQV--------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTG 133 (211)
Q Consensus 89 ~a~~~--------------~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~ 133 (211)
+++.. ..++...+++|+.++.++++++...+. .-.+++.+||
T Consensus 76 ~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~---~~g~Iv~isS 131 (223)
T PRK05884 76 VPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLR---SGGSIISVVP 131 (223)
T ss_pred CCCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhh---cCCeEEEEec
Confidence 97631 013455679999999999988876531 1146777765
|
|
| >PRK07578 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.6e-11 Score=96.10 Aligned_cols=103 Identities=17% Similarity=0.195 Sum_probs=80.1
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccceEEeec
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITNLFWVP 90 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~~~a 90 (211)
+++||||+|+||++++++|. ++ ++|++++|++. .+.+|++|++++.+.++.+.. +|++||++
T Consensus 2 ~vlItGas~giG~~la~~l~-----~~-~~vi~~~r~~~-----------~~~~D~~~~~~~~~~~~~~~~-id~lv~~a 63 (199)
T PRK07578 2 KILVIGASGTIGRAVVAELS-----KR-HEVITAGRSSG-----------DVQVDITDPASIRALFEKVGK-VDAVVSAA 63 (199)
T ss_pred eEEEEcCCcHHHHHHHHHHH-----hc-CcEEEEecCCC-----------ceEecCCChHHHHHHHHhcCC-CCEEEECC
Confidence 69999999999999999999 45 89999998643 457999999999998887654 89999999
Q ss_pred ccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 91 LQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 91 ~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
+... .++...+++|+.++.++.+++...+. +-..|+++||.
T Consensus 64 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~g~iv~iss~ 113 (199)
T PRK07578 64 GKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLN---DGGSFTLTSGI 113 (199)
T ss_pred CCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHh---cCCeEEEEccc
Confidence 7532 13445678899999899988776421 22456776653
|
|
| >TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.40 E-value=6.2e-12 Score=115.53 Aligned_cols=121 Identities=12% Similarity=0.018 Sum_probs=83.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC---------CCCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW---------FPTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~---------~~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
.+|++|||||+|+||++++++|+ +.|++|++++|+..... .....+. .+.+|++|++++.++++.
T Consensus 413 ~gkvvLVTGasggIG~aiA~~La-----~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~-~v~~Dvtd~~~v~~a~~~ 486 (676)
T TIGR02632 413 ARRVAFVTGGAGGIGRETARRLA-----AEGAHVVLADLNLEAAEAVAAEINGQFGAGRAV-ALKMDVTDEQAVKAAFAD 486 (676)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHH-----hCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEE-EEECCCCCHHHHHHHHHH
Confidence 46899999999999999999999 68999999999754311 0113566 889999999998888775
Q ss_pred ccc---ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 79 ISQ---EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 79 ~~~---~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
+.. .+|++||+|+.... .+...+++|+.+...+...+...+.....-.+|+++||.
T Consensus 487 i~~~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~ 554 (676)
T TIGR02632 487 VALAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASK 554 (676)
T ss_pred HHHhcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeCh
Confidence 421 28999999986431 344567788887666554443221001112467787774
|
|
| >KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.40 E-value=7.6e-12 Score=94.64 Aligned_cols=154 Identities=14% Similarity=0.154 Sum_probs=105.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcE-EEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccceE
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWK-VYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITNL 86 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~-V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v 86 (211)
+++.++|.||||..|+.+++++.+ ...+. |+++.|+..........+. ....|....+++.+.+.+ +|+.
T Consensus 17 q~~s~fvlGAtG~~G~~llk~~~E----~~~FSKV~~i~RR~~~d~at~k~v~-q~~vDf~Kl~~~a~~~qg----~dV~ 87 (238)
T KOG4039|consen 17 QNMSGFVLGATGLCGGGLLKHAQE----APQFSKVYAILRRELPDPATDKVVA-QVEVDFSKLSQLATNEQG----PDVL 87 (238)
T ss_pred hccceEEEeccccccHHHHHHHHh----cccceeEEEEEeccCCCccccceee-eEEechHHHHHHHhhhcC----CceE
Confidence 356799999999999999999994 23344 9999998754333456666 778888877777777666 6777
Q ss_pred EeecccCC--chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCCCCC
Q 028258 87 FWVPLQVQ--ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRL 164 (211)
Q Consensus 87 ~~~a~~~~--~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~~~~ 164 (211)
|.|-+... ...+..+++...-...+.++++.. ++++|+++||... +.++. .
T Consensus 88 FcaLgTTRgkaGadgfykvDhDyvl~~A~~AKe~-----Gck~fvLvSS~GA---------------------d~sSr-F 140 (238)
T KOG4039|consen 88 FCALGTTRGKAGADGFYKVDHDYVLQLAQAAKEK-----GCKTFVLVSSAGA---------------------DPSSR-F 140 (238)
T ss_pred EEeecccccccccCceEeechHHHHHHHHHHHhC-----CCeEEEEEeccCC---------------------Ccccc-e
Confidence 76666543 234456677776666777777765 7899999988532 11111 1
Q ss_pred CCCCcchhHHHHHhhcCCCc-eEEEecCCceEecCC
Q 028258 165 PFPNFYYELEDVSASYSPAI-TYSVHRSSVIIGASP 199 (211)
Q Consensus 165 ~~~~~~~~~e~~l~~~~~~~-~~~i~Rp~~i~G~~~ 199 (211)
-.+......|+-+.+ .++ .++|+||+.+.|..+
T Consensus 141 lY~k~KGEvE~~v~e--L~F~~~~i~RPG~ll~~R~ 174 (238)
T KOG4039|consen 141 LYMKMKGEVERDVIE--LDFKHIIILRPGPLLGERT 174 (238)
T ss_pred eeeeccchhhhhhhh--ccccEEEEecCcceecccc
Confidence 123333445555544 455 889999999999877
|
|
| >PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.39 E-value=1.2e-11 Score=99.86 Aligned_cols=120 Identities=13% Similarity=0.017 Sum_probs=83.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC--------CCCCCceeEEEeeCC--CHHHHHHHHH
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW--------FPTALVDRYITFDAL--DPTDTALKLS 77 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~--------~~~~~~~~~i~~Dl~--d~~~~~~~~~ 77 (211)
..|++|||||+|+||.+++++|+ +.|++|++++|++.+.. .....++ ++.+|++ +.+++.+.++
T Consensus 11 ~~k~vlItG~~g~iG~~la~~l~-----~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~-~~~~d~~~~~~~~~~~~~~ 84 (247)
T PRK08945 11 KDRIILVTGAGDGIGREAALTYA-----RHGATVILLGRTEEKLEAVYDEIEAAGGPQPA-IIPLDLLTATPQNYQQLAD 84 (247)
T ss_pred CCCEEEEeCCCchHHHHHHHHHH-----HCCCcEEEEeCCHHHHHHHHHHHHhcCCCCce-EEEecccCCCHHHHHHHHH
Confidence 46899999999999999999999 68999999999864310 1123566 7788886 5565555544
Q ss_pred hccc---ccceEEeecccCC----------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 78 LISQ---EITNLFWVPLQVQ----------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 78 ~~~~---~~~~v~~~a~~~~----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
.+.. .+|.|||+|+... ..+...+++|+.++.++++++...+. ..+..+|+++||.
T Consensus 85 ~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~-~~~~~~iv~~ss~ 153 (247)
T PRK08945 85 TIEEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLL-KSPAASLVFTSSS 153 (247)
T ss_pred HHHHHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHH-hCCCCEEEEEccH
Confidence 3321 3899999987531 13455778999998888877653210 1135678887764
|
|
| >PRK06125 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.39 E-value=1.4e-11 Score=100.27 Aligned_cols=118 Identities=14% Similarity=0.006 Sum_probs=87.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----C---CCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----F---PTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----~---~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
..|+++||||+|+||++++++|+ +.|++|++++|++.+.. . ...+++ ++.+|++|++++.+.++..
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~-~~~~D~~~~~~~~~~~~~~ 79 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFA-----AEGCHLHLVARDADALEALAADLRAAHGVDVA-VHALDLSSPEAREQLAAEA 79 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHH-----HcCCEEEEEeCCHHHHHHHHHHHHhhcCCceE-EEEecCCCHHHHHHHHHHh
Confidence 46899999999999999999999 68999999999765311 0 124577 8899999999998888776
Q ss_pred ccccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeec
Q 028258 80 SQEITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTG 133 (211)
Q Consensus 80 ~~~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~ 133 (211)
.. +|.+||+++... .++...+++|+.+...+.+++...+... +-.+++++||
T Consensus 80 g~-id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~iss 140 (259)
T PRK06125 80 GD-IDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKAR-GSGVIVNVIG 140 (259)
T ss_pred CC-CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCcEEEEecC
Confidence 54 899999997532 1345667889998888777765432101 1246677665
|
|
| >PRK06505 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.39 E-value=8.6e-12 Score=102.57 Aligned_cols=118 Identities=10% Similarity=0.005 Sum_probs=84.5
Q ss_pred CCCeEEEEcCCC--hHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC----CC--CCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 8 PKSVALIIGVTG--ISGLSLAEALKNPTTPGSPWKVYGAARRPPPG----WF--PTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 8 ~~~~ilVtGatG--~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~----~~--~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
++|++|||||++ .||++++++|+ ++|++|+++.|+.... .. ...... .+.+|++|++++.+.++.+
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la-----~~Ga~V~~~~r~~~~~~~~~~~~~~~g~~~-~~~~Dv~d~~~v~~~~~~~ 79 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLA-----AQGAELAFTYQGEALGKRVKPLAESLGSDF-VLPCDVEDIASVDAVFEAL 79 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHH-----hCCCEEEEecCchHHHHHHHHHHHhcCCce-EEeCCCCCHHHHHHHHHHH
Confidence 468999999997 99999999999 7999999988864210 00 112235 7899999999887777654
Q ss_pred cc---ccceEEeecccCC-------------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 80 SQ---EITNLFWVPLQVQ-------------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 80 ~~---~~~~v~~~a~~~~-------------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
.. .+|++||+|+... .+|...+++|+.++.++++++...+.. + .+++.+||.
T Consensus 80 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~--~-G~Iv~isS~ 147 (271)
T PRK06505 80 EKKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPD--G-GSMLTLTYG 147 (271)
T ss_pred HHHhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhcc--C-ceEEEEcCC
Confidence 21 3899999998531 134556789999988888877665321 1 466766653
|
|
| >PRK07533 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.39 E-value=1.2e-11 Score=100.93 Aligned_cols=124 Identities=8% Similarity=-0.001 Sum_probs=89.2
Q ss_pred CccccCCCCCeEEEEcCC--ChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC------CCCCCceeEEEeeCCCHHHH
Q 028258 1 MEKQDQNPKSVALIIGVT--GISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW------FPTALVDRYITFDALDPTDT 72 (211)
Q Consensus 1 ~~~~~~~~~~~ilVtGat--G~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~------~~~~~~~~~i~~Dl~d~~~~ 72 (211)
|-++..+.+|+++||||+ +.||++++++|+ ++|++|++++|+..... ....... ++.+|++|++++
T Consensus 2 ~~~~~~~~~k~~lItGas~g~GIG~a~a~~la-----~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~v 75 (258)
T PRK07533 2 MQPLLPLAGKRGLVVGIANEQSIAWGCARAFR-----ALGAELAVTYLNDKARPYVEPLAEELDAPI-FLPLDVREPGQL 75 (258)
T ss_pred CCcccccCCCEEEEECCCCCCcHHHHHHHHHH-----HcCCEEEEEeCChhhHHHHHHHHHhhccce-EEecCcCCHHHH
Confidence 445555567999999998 599999999999 68999999888753210 0113356 789999999988
Q ss_pred HHHHHhccc---ccceEEeecccCC-------------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeec
Q 028258 73 ALKLSLISQ---EITNLFWVPLQVQ-------------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTG 133 (211)
Q Consensus 73 ~~~~~~~~~---~~~~v~~~a~~~~-------------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~ 133 (211)
.+.++.+.. .+|++||+|+... .++...+++|+.++..+.+.+...+. .-.+++++||
T Consensus 76 ~~~~~~~~~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~---~~g~Ii~iss 149 (258)
T PRK07533 76 EAVFARIAEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMT---NGGSLLTMSY 149 (258)
T ss_pred HHHHHHHHHHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhc---cCCEEEEEec
Confidence 877765421 3899999997532 13456789999999888887766532 1135666665
|
|
| >KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.37 E-value=1.8e-11 Score=106.22 Aligned_cols=121 Identities=20% Similarity=0.194 Sum_probs=84.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC--------CC--------------CCCCceeEEEee
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG--------WF--------------PTALVDRYITFD 65 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~--------~~--------------~~~~~~~~i~~D 65 (211)
..|+|||||||||+|+-+++.|+...+ +--+++.+.|..... +. ...++. .+.+|
T Consensus 11 ~~k~i~vTG~tGFlgKVliEklLr~~p--~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~-pi~GD 87 (467)
T KOG1221|consen 11 KNKTIFVTGATGFLGKVLIEKLLRTTP--DVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVV-PIAGD 87 (467)
T ss_pred CCCeEEEEcccchhHHHHHHHHHhcCc--CcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecce-ecccc
Confidence 368999999999999999999994211 112588888855421 00 124567 88999
Q ss_pred CCCHHH-HH-HHHHhcccccceEEeecccCCchhH--HHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 66 ALDPTD-TA-LKLSLISQEITNLFWVPLQVQESEE--VNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 66 l~d~~~-~~-~~~~~~~~~~~~v~~~a~~~~~~~~--~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
+.+++. +. +-++.+.+.+++|+|+|+....++. ....+|..|++++++.+++. .+++.++++|++-
T Consensus 88 i~~~~LGis~~D~~~l~~eV~ivih~AAtvrFde~l~~al~iNt~Gt~~~l~lak~~----~~l~~~vhVSTAy 157 (467)
T KOG1221|consen 88 ISEPDLGISESDLRTLADEVNIVIHSAATVRFDEPLDVALGINTRGTRNVLQLAKEM----VKLKALVHVSTAY 157 (467)
T ss_pred ccCcccCCChHHHHHHHhcCCEEEEeeeeeccchhhhhhhhhhhHhHHHHHHHHHHh----hhhheEEEeehhh
Confidence 998741 11 1111111238999999998765433 34688999999999999986 5789999998753
|
|
| >PRK09009 C factor cell-cell signaling protein; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=6.2e-11 Score=94.91 Aligned_cols=115 Identities=17% Similarity=0.110 Sum_probs=81.1
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCC--CcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccceEE
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGS--PWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITNLF 87 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~--g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~ 87 (211)
++++||||||+||++++++|+ ++ ++.|....|+.... ....++. ++++|++|.+++.+..+.+.. +|++|
T Consensus 1 ~~vlItGas~gIG~~ia~~l~-----~~~~~~~v~~~~~~~~~~-~~~~~~~-~~~~Dls~~~~~~~~~~~~~~-id~li 72 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLL-----ERYPDATVHATYRHHKPD-FQHDNVQ-WHALDVTDEAEIKQLSEQFTQ-LDWLI 72 (235)
T ss_pred CEEEEECCCChHHHHHHHHHH-----HhCCCCEEEEEccCCccc-cccCceE-EEEecCCCHHHHHHHHHhcCC-CCEEE
Confidence 379999999999999999999 44 46666666654432 2245778 999999999988777666654 89999
Q ss_pred eecccCCc---------------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeec
Q 028258 88 WVPLQVQE---------------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTG 133 (211)
Q Consensus 88 ~~a~~~~~---------------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~ 133 (211)
|+++.... .+...+.+|+.+...+.+.+...+... +..+++++|+
T Consensus 73 ~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~-~~~~i~~iss 132 (235)
T PRK09009 73 NCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQS-ESAKFAVISA 132 (235)
T ss_pred ECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhcccc-CCceEEEEee
Confidence 99986421 123456888888877777776543211 2245666654
|
|
| >TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative | Back alignment and domain information |
|---|
Probab=99.37 E-value=9.2e-12 Score=99.91 Aligned_cols=117 Identities=13% Similarity=0.066 Sum_probs=81.9
Q ss_pred EEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC------C--CCCCCceeEEEeeCCCHHHHHHHHHhcc---
Q 028258 12 ALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG------W--FPTALVDRYITFDALDPTDTALKLSLIS--- 80 (211)
Q Consensus 12 ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~------~--~~~~~~~~~i~~Dl~d~~~~~~~~~~~~--- 80 (211)
++||||+|+||.+++++|+ ++|++|+++.|+.... . ....+++ ++.+|++|++++.++++...
T Consensus 1 vlItGas~giG~~~a~~l~-----~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~~~ 74 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLA-----ADGFEICVHYHSGRSDAESVVSAIQAQGGNAR-LLQFDVADRVACRTLLEADIAEH 74 (239)
T ss_pred CEEeCCCchHHHHHHHHHH-----HCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEE-EEEccCCCHHHHHHHHHHHHHHc
Confidence 5899999999999999999 6899999888764321 0 0134678 89999999998877765431
Q ss_pred cccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHH-hcCCCCCCceEEEEeecCe
Q 028258 81 QEITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLV-SSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 81 ~~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~-~~~~~~~~~~~~~~~s~~~ 135 (211)
..++.++|+++... .++...+++|+.++.++++++. ..+. ..+..+|+++||..
T Consensus 75 ~~i~~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~~~iv~vsS~~ 138 (239)
T TIGR01831 75 GAYYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIR-ARQGGRIITLASVS 138 (239)
T ss_pred CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-hcCCeEEEEEcchh
Confidence 12788999987522 1345577899999888887653 1100 01235778777743
|
This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found. |
| >PRK07791 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=1.5e-11 Score=101.80 Aligned_cols=125 Identities=11% Similarity=-0.103 Sum_probs=87.5
Q ss_pred ccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCC---------CCCC-------CCCCCceeEEEeeCC
Q 028258 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP---------PPGW-------FPTALVDRYITFDAL 67 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~---------~~~~-------~~~~~~~~~i~~Dl~ 67 (211)
|..+++|++|||||+++||++++++|+ +.|++|++++|+. .... .....+. ++.+|++
T Consensus 1 m~~l~~k~~lITGas~GIG~aia~~la-----~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~Dv~ 74 (286)
T PRK07791 1 MGLLDGRVVIVTGAGGGIGRAHALAFA-----AEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAV-ANGDDIA 74 (286)
T ss_pred CCccCCCEEEEECCCchHHHHHHHHHH-----HCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceE-EEeCCCC
Confidence 334557999999999999999999999 6899999888764 1100 0123567 8899999
Q ss_pred CHHHHHHHHHhcc---cccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCC-C----CCceEEEE
Q 028258 68 DPTDTALKLSLIS---QEITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSG-R----SRLRHVAL 130 (211)
Q Consensus 68 d~~~~~~~~~~~~---~~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~-~----~~~~~~~~ 130 (211)
|++++.+.++.+. ..+|++||+|+... .++...+++|+.++..+++++...+.. . ..-.+|++
T Consensus 75 ~~~~v~~~~~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~ 154 (286)
T PRK07791 75 DWDGAANLVDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIIN 154 (286)
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEE
Confidence 9998877776542 13899999998632 145567899999988887776543200 0 00146777
Q ss_pred eecC
Q 028258 131 LTGT 134 (211)
Q Consensus 131 ~s~~ 134 (211)
+||.
T Consensus 155 isS~ 158 (286)
T PRK07791 155 TSSG 158 (286)
T ss_pred eCch
Confidence 7764
|
|
| >PRK12367 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=6.1e-12 Score=102.10 Aligned_cols=106 Identities=15% Similarity=0.090 Sum_probs=80.6
Q ss_pred cccCC--CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC-CC-CCCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 3 KQDQN--PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP-GW-FPTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 3 ~~~~~--~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~-~~-~~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
||+|. ++|+++||||||+||++++++|+ ++|++|++++|++.. .. ....... .+.+|++|.+++.+.+..
T Consensus 6 ~~~~~~l~~k~~lITGas~gIG~ala~~l~-----~~G~~Vi~~~r~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~ 79 (245)
T PRK12367 6 PMAQSTWQGKRIGITGASGALGKALTKAFR-----AKGAKVIGLTHSKINNSESNDESPNE-WIKWECGKEESLDKQLAS 79 (245)
T ss_pred hhhHHhhCCCEEEEEcCCcHHHHHHHHHHH-----HCCCEEEEEECCchhhhhhhccCCCe-EEEeeCCCHHHHHHhcCC
Confidence 44433 46899999999999999999999 689999999997622 11 1112235 789999999888776643
Q ss_pred cccccceEEeecccCC------chhHHHHhhcHHHHHHHHHHHHhc
Q 028258 79 ISQEITNLFWVPLQVQ------ESEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 79 ~~~~~~~v~~~a~~~~------~~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
+|++||+|+... .++.+.+++|+.++.++++++...
T Consensus 80 ----iDilVnnAG~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~ 121 (245)
T PRK12367 80 ----LDVLILNHGINPGGRQDPENINKALEINALSSWRLLELFEDI 121 (245)
T ss_pred ----CCEEEECCccCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 789999998632 245667899999999999887664
|
|
| >smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=99.36 E-value=1.7e-11 Score=92.90 Aligned_cols=114 Identities=19% Similarity=0.102 Sum_probs=83.9
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCc-EEEEEeCCCCCCCC----------CCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRPPPGWF----------PTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~-~V~~~~R~~~~~~~----------~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
++++||||+|+||.+++++|+ ++|+ .|+++.|++..... ...++. ++.+|+++++.+.+.+..
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~-----~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~ 74 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLA-----ERGARHLVLLSRSGPDAPGAAELLAELEALGAEVT-VVACDVADRAALAAALAA 74 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHH-----HhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEE-EEECCCCCHHHHHHHHHH
Confidence 579999999999999999999 5765 68888887553210 123566 789999999887777665
Q ss_pred cc---cccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 79 IS---QEITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 79 ~~---~~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
+. ..+|.++|+++... .++...+++|+.++.++++++... +..+++++||.
T Consensus 75 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~ii~~ss~ 137 (180)
T smart00822 75 IPARLGPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDL-----PLDFFVLFSSV 137 (180)
T ss_pred HHHHcCCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccC-----CcceEEEEccH
Confidence 42 12789999997532 134456789999999999988654 45677777663
|
It uses NADPH to reduce the keto group to a hydroxy group. |
| >COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.36 E-value=1.3e-11 Score=100.78 Aligned_cols=147 Identities=17% Similarity=0.149 Sum_probs=93.8
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccceEEee
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITNLFWV 89 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~~~ 89 (211)
++||||||||++|++++++|+ +.|++|.++.|++........+++ +...|+.++..+...+++ ++.++++
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~-----~~~~~v~~~~r~~~~~~~~~~~v~-~~~~d~~~~~~l~~a~~G----~~~~~~i 70 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELL-----ARGHEVRAAVRNPEAAAALAGGVE-VVLGDLRDPKSLVAGAKG----VDGVLLI 70 (275)
T ss_pred CeEEEEecccchHHHHHHHHH-----hCCCEEEEEEeCHHHHHhhcCCcE-EEEeccCCHhHHHHHhcc----ccEEEEE
Confidence 359999999999999999999 679999999999875321127889 999999999999999988 4666666
Q ss_pred cccCCchhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCCCCCCCCCc
Q 028258 90 PLQVQESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNF 169 (211)
Q Consensus 90 a~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~~~~~~~~~ 169 (211)
........ ........ ++++..+.. ...++++++.|.... +..++ ......
T Consensus 71 ~~~~~~~~-~~~~~~~~---~~~~~a~~a---~~~~~~~~~~s~~~~---------------------~~~~~-~~~~~~ 121 (275)
T COG0702 71 SGLLDGSD-AFRAVQVT---AVVRAAEAA---GAGVKHGVSLSVLGA---------------------DAASP-SALARA 121 (275)
T ss_pred eccccccc-chhHHHHH---HHHHHHHHh---cCCceEEEEeccCCC---------------------CCCCc-cHHHHH
Confidence 65443111 12222222 344444443 224566666544211 00111 000112
Q ss_pred chhHHHHHhhcCCCceEEEecCCceEec
Q 028258 170 YYELEDVSASYSPAITYSVHRSSVIIGA 197 (211)
Q Consensus 170 ~~~~e~~l~~~~~~~~~~i~Rp~~i~G~ 197 (211)
....|+.+. ..+++++++||..+|..
T Consensus 122 ~~~~e~~l~--~sg~~~t~lr~~~~~~~ 147 (275)
T COG0702 122 KAAVEAALR--SSGIPYTTLRRAAFYLG 147 (275)
T ss_pred HHHHHHHHH--hcCCCeEEEecCeeeec
Confidence 233455554 48999999996666654
|
|
| >TIGR01289 LPOR light-dependent protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=99.35 E-value=9.3e-12 Score=104.48 Aligned_cols=125 Identities=14% Similarity=0.124 Sum_probs=90.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCC-cEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSP-WKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g-~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
|+|+++|||||++||.+++++|+ ++| ++|+++.|+..+.. .....++ ++.+|++|.+++...++.+
T Consensus 2 ~~k~vlITGas~GIG~aia~~L~-----~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~-~~~~Dl~~~~~v~~~~~~~ 75 (314)
T TIGR01289 2 QKPTVIITGASSGLGLYAAKALA-----ATGEWHVIMACRDFLKAEQAAKSLGMPKDSYT-IMHLDLGSLDSVRQFVQQF 75 (314)
T ss_pred CCCEEEEECCCChHHHHHHHHHH-----HcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEE-EEEcCCCCHHHHHHHHHHH
Confidence 47899999999999999999999 689 99999998764310 1124567 8899999999887777654
Q ss_pred c---cccceEEeecccCC----------chhHHHHhhcHHHHHHHHHHHHhcCCCCC-CceEEEEeecCeeee
Q 028258 80 S---QEITNLFWVPLQVQ----------ESEEVNIFKNSTMLKNVLSVLVSSNSGRS-RLRHVALLTGTKHYM 138 (211)
Q Consensus 80 ~---~~~~~v~~~a~~~~----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~~~~~s~~~~y~ 138 (211)
. ..+|++||+|+... ..+...+++|+.++..+++.+...+.... +..+|+++||...+.
T Consensus 76 ~~~~~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~ 148 (314)
T TIGR01289 76 RESGRPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNT 148 (314)
T ss_pred HHhCCCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCcccc
Confidence 2 13899999997521 12345678999887777666654321111 135889998876653
|
This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form. |
| >PRK07370 enoyl-(acyl carrier protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.35 E-value=3.5e-11 Score=98.12 Aligned_cols=120 Identities=14% Similarity=0.052 Sum_probs=86.2
Q ss_pred CCCCCeEEEEcCC--ChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------C--CCCCceeEEEeeCCCHHHHHH
Q 028258 6 QNPKSVALIIGVT--GISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------F--PTALVDRYITFDALDPTDTAL 74 (211)
Q Consensus 6 ~~~~~~ilVtGat--G~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~--~~~~~~~~i~~Dl~d~~~~~~ 74 (211)
.+++|+++||||+ +.||++++++|+ +.|++|++..|+..... . ....+. ++.+|++|++++.+
T Consensus 3 ~l~~k~~lItGas~~~GIG~aia~~la-----~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~v~~ 76 (258)
T PRK07370 3 DLTGKKALVTGIANNRSIAWGIAQQLH-----AAGAELGITYLPDEKGRFEKKVRELTEPLNPSL-FLPCDVQDDAQIEE 76 (258)
T ss_pred ccCCcEEEEeCCCCCCchHHHHHHHHH-----HCCCEEEEEecCcccchHHHHHHHHHhccCcce-EeecCcCCHHHHHH
Confidence 3457899999986 899999999999 69999987766432110 0 113456 88999999999888
Q ss_pred HHHhccc---ccceEEeecccCC-------------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 75 KLSLISQ---EITNLFWVPLQVQ-------------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 75 ~~~~~~~---~~~~v~~~a~~~~-------------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
.++.+.. .+|++||+++... ..+...+++|+.++..+.+++...+.. -.+|+++||.
T Consensus 77 ~~~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~---~g~Iv~isS~ 149 (258)
T PRK07370 77 TFETIKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSE---GGSIVTLTYL 149 (258)
T ss_pred HHHHHHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhh---CCeEEEEecc
Confidence 7766531 3899999997531 134556789999988888877665321 1467777763
|
|
| >KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=99.35 E-value=3.7e-12 Score=103.00 Aligned_cols=151 Identities=15% Similarity=0.037 Sum_probs=109.6
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC------CCCCCceeEEEeeCCCHHHHHHHHHhcccccc
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW------FPTALVDRYITFDALDPTDTALKLSLISQEIT 84 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~ 84 (211)
.+-|+|||||+|+.+|+.|. +.|-+|++--|..+... -...++- +...|+.|++++..+++-. .
T Consensus 63 VaTVFGAtGFlGryvvnkla-----k~GSQviiPyR~d~~~~r~lkvmGdLGQvl-~~~fd~~DedSIr~vvk~s----N 132 (391)
T KOG2865|consen 63 VATVFGATGFLGRYVVNKLA-----KMGSQVIIPYRGDEYDPRHLKVMGDLGQVL-FMKFDLRDEDSIRAVVKHS----N 132 (391)
T ss_pred EEEEecccccccHHHHHHHh-----hcCCeEEEeccCCccchhheeeccccccee-eeccCCCCHHHHHHHHHhC----c
Confidence 68899999999999999999 68999998888654321 1236677 8899999999999998863 5
Q ss_pred eEEeecccCCchh-HHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCCCC
Q 028258 85 NLFWVPLQVQESE-EVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSR 163 (211)
Q Consensus 85 ~v~~~a~~~~~~~-~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~~~ 163 (211)
+||++.+..-++. -...++|+.+.+.+...|++. ++.+|+++|+...- +...+.
T Consensus 133 VVINLIGrd~eTknf~f~Dvn~~~aerlAricke~-----GVerfIhvS~Lgan-------------------v~s~Sr- 187 (391)
T KOG2865|consen 133 VVINLIGRDYETKNFSFEDVNVHIAERLARICKEA-----GVERFIHVSCLGAN-------------------VKSPSR- 187 (391)
T ss_pred EEEEeeccccccCCcccccccchHHHHHHHHHHhh-----Chhheeehhhcccc-------------------ccChHH-
Confidence 7888887654322 235588999999999999987 78999998763210 000000
Q ss_pred CCCCCcchhHHHHHhhcCCCceEEEecCCceEecCCC
Q 028258 164 LPFPNFYYELEDVSASYSPAITYSVHRSSVIIGASPR 200 (211)
Q Consensus 164 ~~~~~~~~~~e~~l~~~~~~~~~~i~Rp~~i~G~~~~ 200 (211)
.-...+..|+.+++ .--..+|+||+.|||..++
T Consensus 188 --~LrsK~~gE~aVrd--afPeAtIirPa~iyG~eDr 220 (391)
T KOG2865|consen 188 --MLRSKAAGEEAVRD--AFPEATIIRPADIYGTEDR 220 (391)
T ss_pred --HHHhhhhhHHHHHh--hCCcceeechhhhcccchh
Confidence 01233455666654 2337899999999998764
|
|
| >KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.35 E-value=5.5e-12 Score=100.16 Aligned_cols=143 Identities=22% Similarity=0.177 Sum_probs=106.3
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCC-------------CCCCceeEEEeeCCCHHHHHHH
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF-------------PTALVDRYITFDALDPTDTALK 75 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~-------------~~~~~~~~i~~Dl~d~~~~~~~ 75 (211)
+|.+||||-||.-|++|++.|+ .+||+|.++.|+.+.+.. ...... ...+|++|...+.+.
T Consensus 28 rkvALITGItGQDGSYLaEfLL-----~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mk-LHYgDmTDss~L~k~ 101 (376)
T KOG1372|consen 28 RKVALITGITGQDGSYLAEFLL-----SKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMK-LHYGDMTDSSCLIKL 101 (376)
T ss_pred ceEEEEecccCCCchHHHHHHH-----hCCceeeEEEeeccccchhhhhhhhcCchhcccceeE-EeeccccchHHHHHH
Confidence 5689999999999999999999 799999999998775310 124456 778999999999999
Q ss_pred HHhcccccceEEeecccCCc-----hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCC
Q 028258 76 LSLISQEITNLFWVPLQVQE-----SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQL 150 (211)
Q Consensus 76 ~~~~~~~~~~v~~~a~~~~~-----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~ 150 (211)
+..++ ++-|+|+|+++.. -++-+.++...|+..|+++++... -..-.+|...|++..||..
T Consensus 102 I~~ik--PtEiYnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~--l~~~VrfYQAstSElyGkv---------- 167 (376)
T KOG1372|consen 102 ISTIK--PTEVYNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACR--LTEKVRFYQASTSELYGKV---------- 167 (376)
T ss_pred HhccC--chhhhhhhhhcceEEEeecccceeeccchhhhhHHHHHHhcC--cccceeEEecccHhhcccc----------
Confidence 99887 7899999988542 234455778889999999998651 1112455566677777642
Q ss_pred CCCCCCCcCCCCCCCCCCcchhHHH
Q 028258 151 MPYEVPFKEDSSRLPFPNFYYELED 175 (211)
Q Consensus 151 ~~~~~~~~e~~~~~~~~~~~~~~e~ 175 (211)
.+.|..|.+|.. |.+.|+..|
T Consensus 168 --~e~PQsE~TPFy--PRSPYa~aK 188 (376)
T KOG1372|consen 168 --QEIPQSETTPFY--PRSPYAAAK 188 (376)
T ss_pred --cCCCcccCCCCC--CCChhHHhh
Confidence 367888988864 444455444
|
|
| >PLN02780 ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Probab=99.35 E-value=2.6e-11 Score=102.12 Aligned_cols=121 Identities=15% Similarity=0.006 Sum_probs=82.2
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----C----CCCCceeEEEeeCCC--HHHHHHHHH
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----F----PTALVDRYITFDALD--PTDTALKLS 77 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----~----~~~~~~~~i~~Dl~d--~~~~~~~~~ 77 (211)
++.++||||||+||++++++|+ ++|++|++++|++++.. . ....+. .+.+|+++ .+.+.+..+
T Consensus 53 g~~~lITGAs~GIG~alA~~La-----~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~-~~~~Dl~~~~~~~~~~l~~ 126 (320)
T PLN02780 53 GSWALVTGPTDGIGKGFAFQLA-----RKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIK-TVVVDFSGDIDEGVKRIKE 126 (320)
T ss_pred CCEEEEeCCCcHHHHHHHHHHH-----HCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEE-EEEEECCCCcHHHHHHHHH
Confidence 5899999999999999999999 68999999999875421 0 013466 78899985 233333333
Q ss_pred hccc-ccceEEeecccCCc-----------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCee
Q 028258 78 LISQ-EITNLFWVPLQVQE-----------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKH 136 (211)
Q Consensus 78 ~~~~-~~~~v~~~a~~~~~-----------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~ 136 (211)
.+.. ++|++||+|+.... ++...+++|+.++.++.+++...+... +..+++++||...
T Consensus 127 ~~~~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~~g~IV~iSS~a~ 196 (320)
T PLN02780 127 TIEGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKR-KKGAIINIGSGAA 196 (320)
T ss_pred HhcCCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhc-CCcEEEEEechhh
Confidence 3221 26799999976311 233467899999888888765432101 2357888887543
|
|
| >PRK08340 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.35 E-value=2.2e-11 Score=99.12 Aligned_cols=119 Identities=13% Similarity=0.025 Sum_probs=79.4
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC------CCCCCceeEEEeeCCCHHHHHHHHHhcc---c
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW------FPTALVDRYITFDALDPTDTALKLSLIS---Q 81 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~---~ 81 (211)
++|||||+|+||++++++|+ ++|++|++++|++.... .....+. ++.+|++|++++.+.++.+. .
T Consensus 2 ~vlItGas~gIG~aia~~l~-----~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~-~~~~Dv~d~~~~~~~~~~~~~~~g 75 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELL-----KKGARVVISSRNEENLEKALKELKEYGEVY-AVKADLSDKDDLKNLVKEAWELLG 75 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHH-----HcCCEEEEEeCCHHHHHHHHHHHHhcCCce-EEEcCCCCHHHHHHHHHHHHHhcC
Confidence 69999999999999999999 68999999999764311 0123577 89999999998887776542 1
Q ss_pred ccceEEeecccCC-----------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 82 EITNLFWVPLQVQ-----------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 82 ~~~~v~~~a~~~~-----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
.+|++||+++... .++.+.+.+|+.+...+...+...+....+-.+|+++||..
T Consensus 76 ~id~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~ 140 (259)
T PRK08340 76 GIDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVS 140 (259)
T ss_pred CCCEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcc
Confidence 3899999998531 02333456676654444433222100001235788887754
|
|
| >PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.34 E-value=4.2e-11 Score=100.13 Aligned_cols=104 Identities=10% Similarity=-0.116 Sum_probs=79.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC-CC-------CCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP-GW-------FPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~-~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
++|+++||||+|+||++++++|+ ++|++|++.+|+... .. .....+. ++.+|++|++.+.+.++.+
T Consensus 11 ~~k~~lVTGas~gIG~~ia~~L~-----~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~-~~~~Dv~d~~~~~~~~~~~ 84 (306)
T PRK07792 11 SGKVAVVTGAAAGLGRAEALGLA-----RLGATVVVNDVASALDASDVLDEIRAAGAKAV-AVAGDISQRATADELVATA 84 (306)
T ss_pred CCCEEEEECCCChHHHHHHHHHH-----HCCCEEEEecCCchhHHHHHHHHHHhcCCeEE-EEeCCCCCHHHHHHHHHHH
Confidence 46899999999999999999999 689999988875432 10 0134577 8899999998887766543
Q ss_pred c--cccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHh
Q 028258 80 S--QEITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVS 117 (211)
Q Consensus 80 ~--~~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~ 117 (211)
. ..+|++||+|+.... ++...+++|+.++.++++++..
T Consensus 85 ~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~ 133 (306)
T PRK07792 85 VGLGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAA 133 (306)
T ss_pred HHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 1 138999999986431 3456778999999898887653
|
|
| >TIGR02685 pter_reduc_Leis pteridine reductase | Back alignment and domain information |
|---|
Probab=99.34 E-value=3.6e-11 Score=98.38 Aligned_cols=102 Identities=12% Similarity=0.017 Sum_probs=72.4
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC-CCC-----C---CCCCceeEEEeeCCCHHHHH----HHH
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP-PGW-----F---PTALVDRYITFDALDPTDTA----LKL 76 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~-~~~-----~---~~~~~~~~i~~Dl~d~~~~~----~~~ 76 (211)
++++||||+|+||++++++|+ ++|++|+++.|+.. ... . ....+. ++.+|++|.+++. +.+
T Consensus 2 ~~~lITGas~gIG~~~a~~l~-----~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~Dv~d~~~~~~~~~~~~ 75 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALH-----QEGYRVVLHYHRSAAAASTLAAELNARRPNSAV-TCQADLSNSATLFSRCEAII 75 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHH-----hCCCeEEEEcCCcHHHHHHHHHHHHhccCCceE-EEEccCCCchhhHHHHHHHH
Confidence 679999999999999999999 69999998876532 210 0 123456 7899999987543 333
Q ss_pred Hh----cccccceEEeecccCCc--------------------hhHHHHhhcHHHHHHHHHHHHhc
Q 028258 77 SL----ISQEITNLFWVPLQVQE--------------------SEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 77 ~~----~~~~~~~v~~~a~~~~~--------------------~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
+. .. .+|+|||+|+.... .+.+.+++|+.+...+.+++...
T Consensus 76 ~~~~~~~g-~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~ 140 (267)
T TIGR02685 76 DACFRAFG-RCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQR 140 (267)
T ss_pred HHHHHccC-CceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 22 22 28999999975221 13356789999888888876654
|
Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. |
| >PRK06940 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.33 E-value=1.3e-11 Score=101.56 Aligned_cols=104 Identities=17% Similarity=0.017 Sum_probs=81.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----C--CCCCceeEEEeeCCCHHHHHHHHHhcc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----F--PTALVDRYITFDALDPTDTALKLSLIS 80 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----~--~~~~~~~~i~~Dl~d~~~~~~~~~~~~ 80 (211)
|+|+++|||| |+||++++++|. +|++|++++|+..+.. . ....+. ++.+|++|++++.+.++.+.
T Consensus 1 ~~k~~lItGa-~gIG~~la~~l~------~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~-~~~~Dv~d~~~i~~~~~~~~ 72 (275)
T PRK06940 1 MKEVVVVIGA-GGIGQAIARRVG------AGKKVLLADYNEENLEAAAKTLREAGFDVS-TQEVDVSSRESVKALAATAQ 72 (275)
T ss_pred CCCEEEEECC-ChHHHHHHHHHh------CCCEEEEEeCCHHHHHHHHHHHHhcCCeEE-EEEeecCCHHHHHHHHHHHH
Confidence 6789999998 699999999996 5899999999754311 0 123577 88999999998887776542
Q ss_pred --cccceEEeecccCC--chhHHHHhhcHHHHHHHHHHHHhcC
Q 028258 81 --QEITNLFWVPLQVQ--ESEEVNIFKNSTMLKNVLSVLVSSN 119 (211)
Q Consensus 81 --~~~~~v~~~a~~~~--~~~~~~~~~n~~~~~~l~~~~~~~~ 119 (211)
..+|++||+|+... .++...+++|+.++.++++++...+
T Consensus 73 ~~g~id~li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m 115 (275)
T PRK06940 73 TLGPVTGLVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVI 115 (275)
T ss_pred hcCCCCEEEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHH
Confidence 13899999998743 3577788999999999999887653
|
|
| >PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.33 E-value=4.2e-11 Score=97.43 Aligned_cols=122 Identities=11% Similarity=0.025 Sum_probs=83.0
Q ss_pred CCCCCeEEEEcCCC--hHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC--------C----------CCCCCCceeEEEee
Q 028258 6 QNPKSVALIIGVTG--ISGLSLAEALKNPTTPGSPWKVYGAARRPPP--------G----------WFPTALVDRYITFD 65 (211)
Q Consensus 6 ~~~~~~ilVtGatG--~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~--------~----------~~~~~~~~~~i~~D 65 (211)
..++|++||||||| .||++++++|+ +.|++|+++.|.... . ......+. ++.+|
T Consensus 3 ~l~~k~vlVtGas~~~giG~~~a~~l~-----~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~D 76 (256)
T PRK12859 3 QLKNKVAVVTGVSRLDGIGAAICKELA-----EAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVS-SMELD 76 (256)
T ss_pred CcCCcEEEEECCCCCCChHHHHHHHHH-----HCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEE-EEEcC
Confidence 44569999999995 89999999999 689998887542110 0 00123567 88999
Q ss_pred CCCHHHHHHHHHhccc---ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeec
Q 028258 66 ALDPTDTALKLSLISQ---EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTG 133 (211)
Q Consensus 66 l~d~~~~~~~~~~~~~---~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~ 133 (211)
++|.+++.+++..+.. .+|++||+++.... .+...+++|+.+...+..++...+... .-.+|+++||
T Consensus 77 ~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~isS 155 (256)
T PRK12859 77 LTQNDAPKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKK-SGGRIINMTS 155 (256)
T ss_pred CCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc-CCeEEEEEcc
Confidence 9999988777765421 27999999976321 344567889988777765554332101 2357888877
Q ss_pred C
Q 028258 134 T 134 (211)
Q Consensus 134 ~ 134 (211)
.
T Consensus 156 ~ 156 (256)
T PRK12859 156 G 156 (256)
T ss_pred c
Confidence 4
|
|
| >PRK07984 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.33 E-value=7.7e-11 Score=96.49 Aligned_cols=120 Identities=8% Similarity=-0.077 Sum_probs=83.5
Q ss_pred CCCCCeEEEEcCCC--hHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC---C---CCCCCCceeEEEeeCCCHHHHHHHHH
Q 028258 6 QNPKSVALIIGVTG--ISGLSLAEALKNPTTPGSPWKVYGAARRPPP---G---WFPTALVDRYITFDALDPTDTALKLS 77 (211)
Q Consensus 6 ~~~~~~ilVtGatG--~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~---~---~~~~~~~~~~i~~Dl~d~~~~~~~~~ 77 (211)
++.+|+++||||++ .||++++++|+ ++|++|+++.|+... . ....+... .+.+|++|++++.+.++
T Consensus 3 ~l~~k~~lITGas~~~GIG~aia~~la-----~~G~~vil~~r~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~v~~~~~ 76 (262)
T PRK07984 3 FLSGKRILVTGVASKLSIAYGIAQAMH-----REGAELAFTYQNDKLKGRVEEFAAQLGSDI-VLPCDVAEDASIDAMFA 76 (262)
T ss_pred ccCCCEEEEeCCCCCccHHHHHHHHHH-----HCCCEEEEEecchhHHHHHHHHHhccCCce-EeecCCCCHHHHHHHHH
Confidence 34568999999985 99999999999 699999988886311 0 01124466 78999999999888876
Q ss_pred hccc---ccceEEeecccCCc--------------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 78 LISQ---EITNLFWVPLQVQE--------------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 78 ~~~~---~~~~v~~~a~~~~~--------------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
.+.. .+|.+||+|+.... .+...+++|+.+...+.+++...+. . + .+++++||.
T Consensus 77 ~~~~~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~-~-g~Iv~iss~ 147 (262)
T PRK07984 77 ELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLN-P-G-SALLTLSYL 147 (262)
T ss_pred HHHhhcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhc-C-C-cEEEEEecC
Confidence 5431 38999999975311 2334568898887777777654321 1 1 356676653
|
|
| >PRK08594 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.32 E-value=1e-10 Score=95.44 Aligned_cols=118 Identities=11% Similarity=-0.028 Sum_probs=84.3
Q ss_pred CCCeEEEEcCC--ChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC---C-----CCCCCceeEEEeeCCCHHHHHHHHH
Q 028258 8 PKSVALIIGVT--GISGLSLAEALKNPTTPGSPWKVYGAARRPPPG---W-----FPTALVDRYITFDALDPTDTALKLS 77 (211)
Q Consensus 8 ~~~~ilVtGat--G~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~---~-----~~~~~~~~~i~~Dl~d~~~~~~~~~ 77 (211)
.+|+++||||+ +.||++++++|+ ++|++|+++.|+.... . ....++. ++.+|++|++++.+.++
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la-----~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~Dv~d~~~v~~~~~ 79 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLH-----NAGAKLVFTYAGERLEKEVRELADTLEGQESL-LLPCDVTSDEEITACFE 79 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHH-----HCCCEEEEecCcccchHHHHHHHHHcCCCceE-EEecCCCCHHHHHHHHH
Confidence 46899999997 899999999999 6999999887753211 0 1124577 88999999998887776
Q ss_pred hcc---cccceEEeecccCC------c-------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 78 LIS---QEITNLFWVPLQVQ------E-------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 78 ~~~---~~~~~v~~~a~~~~------~-------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
.+. ..+|.+||+++... . .+...+++|..++..+.+++...+. .-.+|+++||.
T Consensus 80 ~~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~---~~g~Iv~isS~ 149 (257)
T PRK08594 80 TIKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMT---EGGSIVTLTYL 149 (257)
T ss_pred HHHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcc---cCceEEEEccc
Confidence 542 13899999987531 0 2344568898888777777766531 11467777764
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.32 E-value=2.8e-11 Score=107.94 Aligned_cols=121 Identities=13% Similarity=-0.027 Sum_probs=88.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC----CCCCCceeEEEeeCCCHHHHHHHHHhcc---
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW----FPTALVDRYITFDALDPTDTALKLSLIS--- 80 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~----~~~~~~~~~i~~Dl~d~~~~~~~~~~~~--- 80 (211)
.+|++|||||+++||.+++++|+ ++|++|++++|+.+... ....++. ++.+|++|++++.++++.+.
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~ 77 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFA-----RAGDQVVVADRNVERARERADSLGPDHH-ALAMDVSDEAQIREGFEQLHREF 77 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHhCCcee-EEEeccCCHHHHHHHHHHHHHHh
Confidence 46899999999999999999999 68999999999765421 0124567 78999999998888776642
Q ss_pred cccceEEeecccCC-----------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 81 QEITNLFWVPLQVQ-----------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 81 ~~~~~v~~~a~~~~-----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
..+|++||+++... .++...+++|+.++..+++++...+.....-.+++++||.
T Consensus 78 g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~ 142 (520)
T PRK06484 78 GRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASG 142 (520)
T ss_pred CCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCc
Confidence 13899999987521 1355678999999888888776542101111367777764
|
|
| >PRK08690 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=7.2e-11 Score=96.44 Aligned_cols=120 Identities=9% Similarity=-0.074 Sum_probs=81.8
Q ss_pred CCCCeEEEEcC--CChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC---C-C--CCCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 7 NPKSVALIIGV--TGISGLSLAEALKNPTTPGSPWKVYGAARRPPP---G-W--FPTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 7 ~~~~~ilVtGa--tG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~---~-~--~~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
+++|+++|||| ++.||++++++|+ ++|++|++..|+... . . ....... .+.+|++|++++.+.++.
T Consensus 4 ~~~k~~lITGa~~~~GIG~a~a~~l~-----~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~v~~~~~~ 77 (261)
T PRK08690 4 LQGKKILITGMISERSIAYGIAKACR-----EQGAELAFTYVVDKLEERVRKMAAELDSEL-VFRCDVASDDEINQVFAD 77 (261)
T ss_pred cCCcEEEEECCCCCCcHHHHHHHHHH-----HCCCEEEEEcCcHHHHHHHHHHHhccCCce-EEECCCCCHHHHHHHHHH
Confidence 45689999997 6799999999999 799999987664211 0 0 0113456 789999999988887765
Q ss_pred ccc---ccceEEeecccCCc--------------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 79 ISQ---EITNLFWVPLQVQE--------------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 79 ~~~---~~~~v~~~a~~~~~--------------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
+.. .+|++||+|+.... .+...+++|+.++..+.+++...+... -.+++++||.
T Consensus 78 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~--~g~Iv~iss~ 148 (261)
T PRK08690 78 LGKHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGR--NSAIVALSYL 148 (261)
T ss_pred HHHHhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhc--CcEEEEEccc
Confidence 421 38999999976421 123345788888777777665432111 1467777664
|
|
| >PRK08303 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.30 E-value=8.4e-11 Score=98.38 Aligned_cols=121 Identities=16% Similarity=0.002 Sum_probs=83.9
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC--------C-------C--CCCCceeEEEeeCCCH
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG--------W-------F--PTALVDRYITFDALDP 69 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~--------~-------~--~~~~~~~~i~~Dl~d~ 69 (211)
+.+|+++||||+++||++++++|+ +.|++|++++|+.... . . ....+. ++.+|++|+
T Consensus 6 l~~k~~lITGgs~GIG~aia~~la-----~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~Dv~~~ 79 (305)
T PRK08303 6 LRGKVALVAGATRGAGRGIAVELG-----AAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGI-AVQVDHLVP 79 (305)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHH-----HCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceE-EEEcCCCCH
Confidence 346899999999999999999999 6899999999974210 0 0 012466 789999999
Q ss_pred HHHHHHHHhccc---ccceEEeec-ccC------C-------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEee
Q 028258 70 TDTALKLSLISQ---EITNLFWVP-LQV------Q-------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLT 132 (211)
Q Consensus 70 ~~~~~~~~~~~~---~~~~v~~~a-~~~------~-------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s 132 (211)
+++.++++.+.. .+|++||++ +.. . ..+.+.+++|+.+...+++++...+... +-.+|+.+|
T Consensus 80 ~~v~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~-~~g~IV~is 158 (305)
T PRK08303 80 EQVRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRR-PGGLVVEIT 158 (305)
T ss_pred HHHHHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhC-CCcEEEEEC
Confidence 988877765421 389999998 521 1 1234556888888777777666543111 124677776
Q ss_pred cC
Q 028258 133 GT 134 (211)
Q Consensus 133 ~~ 134 (211)
|.
T Consensus 159 S~ 160 (305)
T PRK08303 159 DG 160 (305)
T ss_pred Cc
Confidence 63
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.29 E-value=5.2e-11 Score=104.57 Aligned_cols=121 Identities=12% Similarity=0.026 Sum_probs=87.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC----CCCCCceeEEEeeCCCHHHHHHHHHhccc--
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW----FPTALVDRYITFDALDPTDTALKLSLISQ-- 81 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~----~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~-- 81 (211)
.++++|||||+|+||++++++|. ++|++|++++|+..... ...-+.+ ++.+|++|++++.+.++.+..
T Consensus 209 ~g~~vlItGasggIG~~la~~l~-----~~Ga~vi~~~~~~~~~~l~~~~~~~~~~-~~~~Dv~~~~~~~~~~~~~~~~~ 282 (450)
T PRK08261 209 AGKVALVTGAARGIGAAIAEVLA-----RDGAHVVCLDVPAAGEALAAVANRVGGT-ALALDITAPDAPARIAEHLAERH 282 (450)
T ss_pred CCCEEEEecCCCHHHHHHHHHHH-----HCCCEEEEEeCCccHHHHHHHHHHcCCe-EEEEeCCCHHHHHHHHHHHHHhC
Confidence 46899999999999999999999 68999999988543210 0112356 889999999988777765421
Q ss_pred -ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 82 -EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 82 -~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
.+|.|||+++... ..+...+++|+.++.++.+++..... ...-.+|+++||..
T Consensus 283 g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~-~~~~g~iv~~SS~~ 345 (450)
T PRK08261 283 GGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGA-LGDGGRIVGVSSIS 345 (450)
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhh-hcCCCEEEEECChh
Confidence 3899999998642 13456678999999999998876310 01125778777643
|
|
| >PRK08159 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=1.1e-10 Score=96.03 Aligned_cols=117 Identities=9% Similarity=-0.051 Sum_probs=84.7
Q ss_pred CCCeEEEEcCC--ChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC---C---CCCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 8 PKSVALIIGVT--GISGLSLAEALKNPTTPGSPWKVYGAARRPPP---G---WFPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 8 ~~~~ilVtGat--G~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~---~---~~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
.+|++|||||+ +.||.+++++|+ ++|++|+++.|+... . ........ .+.+|++|++++.+.++.+
T Consensus 9 ~~k~~lItGas~~~GIG~aia~~la-----~~G~~V~l~~r~~~~~~~~~~l~~~~~~~~-~~~~Dl~~~~~v~~~~~~~ 82 (272)
T PRK08159 9 AGKRGLILGVANNRSIAWGIAKACR-----AAGAELAFTYQGDALKKRVEPLAAELGAFV-AGHCDVTDEASIDAVFETL 82 (272)
T ss_pred cCCEEEEECCCCCCcHHHHHHHHHH-----HCCCEEEEEcCchHHHHHHHHHHHhcCCce-EEecCCCCHHHHHHHHHHH
Confidence 46899999997 899999999999 799999888775311 0 00113356 7899999999888877654
Q ss_pred cc---ccceEEeecccCC-------------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeec
Q 028258 80 SQ---EITNLFWVPLQVQ-------------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTG 133 (211)
Q Consensus 80 ~~---~~~~v~~~a~~~~-------------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~ 133 (211)
.. .+|++||+|+... ..+...+++|+.++..+++++...+. +-.+++++||
T Consensus 83 ~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~---~~g~Iv~iss 149 (272)
T PRK08159 83 EKKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMT---DGGSILTLTY 149 (272)
T ss_pred HHhcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcC---CCceEEEEec
Confidence 31 3899999997532 13456779999999888888776532 1146666665
|
|
| >PRK07889 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=1.5e-10 Score=94.36 Aligned_cols=107 Identities=9% Similarity=-0.012 Sum_probs=78.9
Q ss_pred CCCCeEEEEcC--CChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC-CC-C----CCCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 7 NPKSVALIIGV--TGISGLSLAEALKNPTTPGSPWKVYGAARRPP-PG-W----FPTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 7 ~~~~~ilVtGa--tG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~-~~-~----~~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
+.+|+++|||| ++.||.+++++|+ ++|++|++++|+.. .. . .....+. ++.+|++|++++.+.++.
T Consensus 5 ~~~k~~lItGa~~s~GIG~a~a~~la-----~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~i~~~~~~ 78 (256)
T PRK07889 5 LEGKRILVTGVITDSSIAFHVARVAQ-----EQGAEVVLTGFGRALRLTERIAKRLPEPAP-VLELDVTNEEHLASLADR 78 (256)
T ss_pred ccCCEEEEeCCCCcchHHHHHHHHHH-----HCCCEEEEecCccchhHHHHHHHhcCCCCc-EEeCCCCCHHHHHHHHHH
Confidence 34689999999 8999999999999 69999999887542 11 0 0123577 899999999988777665
Q ss_pred cc---cccceEEeecccCCc-------------hhHHHHhhcHHHHHHHHHHHHhcC
Q 028258 79 IS---QEITNLFWVPLQVQE-------------SEEVNIFKNSTMLKNVLSVLVSSN 119 (211)
Q Consensus 79 ~~---~~~~~v~~~a~~~~~-------------~~~~~~~~n~~~~~~l~~~~~~~~ 119 (211)
+. ..+|++||+|+.... .+...+++|+.++..+.+.+...+
T Consensus 79 ~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m 135 (256)
T PRK07889 79 VREHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLM 135 (256)
T ss_pred HHHHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhc
Confidence 42 138999999976310 233457899998888888776553
|
|
| >PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases | Back alignment and domain information |
|---|
Probab=99.28 E-value=1.6e-11 Score=93.06 Aligned_cols=116 Identities=17% Similarity=0.094 Sum_probs=87.5
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCC--CCCC-------CCCCCCceeEEEeeCCCHHHHHHHHHhcc
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR--PPPG-------WFPTALVDRYITFDALDPTDTALKLSLIS 80 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~--~~~~-------~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~ 80 (211)
|+++||||+|.||++++++|++ +.++.|+++.|+ .+.. .....++. ++.+|+++++++.+.++.+.
T Consensus 1 k~~lItGa~~giG~~~a~~l~~----~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~-~~~~D~~~~~~~~~~~~~~~ 75 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALAR----RGARVVILTSRSEDSEGAQELIQELKAPGAKIT-FIECDLSDPESIRALIEEVI 75 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHH----TTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEE-EEESETTSHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHh----cCceEEEEeeecccccccccccccccccccccc-cccccccccccccccccccc
Confidence 6899999999999999999994 336678888888 1110 01236778 89999999998888877665
Q ss_pred ---cccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 81 ---QEITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 81 ---~~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
..+|++||+++.... .+...+++|+.+...+.+++... .-.+++++||..
T Consensus 76 ~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~-----~~g~iv~~sS~~ 137 (167)
T PF00106_consen 76 KRFGPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQ-----GGGKIVNISSIA 137 (167)
T ss_dssp HHHSSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHH-----TTEEEEEEEEGG
T ss_pred cccccccccccccccccccccccccchhhhhccccccceeeeeeehheec-----cccceEEecchh
Confidence 138999999987442 34457789999888888888774 346778887743
|
As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A .... |
| >PRK06997 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=1.4e-10 Score=94.74 Aligned_cols=120 Identities=10% Similarity=-0.094 Sum_probs=84.3
Q ss_pred CCCCCeEEEEcC--CChHHHHHHHHhhCCCCCCCCcEEEEEeCCC---CCCC---CCCCCceeEEEeeCCCHHHHHHHHH
Q 028258 6 QNPKSVALIIGV--TGISGLSLAEALKNPTTPGSPWKVYGAARRP---PPGW---FPTALVDRYITFDALDPTDTALKLS 77 (211)
Q Consensus 6 ~~~~~~ilVtGa--tG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~---~~~~---~~~~~~~~~i~~Dl~d~~~~~~~~~ 77 (211)
.+++|+++|||| ++.||++++++|+ ++|++|+++.|.. +... ...+... .+.+|++|++++.++++
T Consensus 3 ~l~~k~vlItGas~~~GIG~a~a~~l~-----~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dv~d~~~v~~~~~ 76 (260)
T PRK06997 3 FLAGKRILITGLLSNRSIAYGIAKACK-----REGAELAFTYVGDRFKDRITEFAAEFGSDL-VFPCDVASDEQIDALFA 76 (260)
T ss_pred ccCCcEEEEeCCCCCCcHHHHHHHHHH-----HCCCeEEEEccchHHHHHHHHHHHhcCCcc-eeeccCCCHHHHHHHHH
Confidence 345689999996 6899999999999 6999998876531 1110 0112345 78899999999888876
Q ss_pred hccc---ccceEEeecccCC--------------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 78 LISQ---EITNLFWVPLQVQ--------------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 78 ~~~~---~~~~v~~~a~~~~--------------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
.+.. .+|++||+|+... .++...+++|+.++..+.+++...+. +-.+++++||.
T Consensus 77 ~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~---~~g~Ii~iss~ 147 (260)
T PRK06997 77 SLGQHWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLS---DDASLLTLSYL 147 (260)
T ss_pred HHHHHhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcC---CCceEEEEecc
Confidence 5531 3899999997531 12344678999998888888776642 12467777663
|
|
| >PRK08415 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=9.6e-11 Score=96.54 Aligned_cols=117 Identities=12% Similarity=-0.025 Sum_probs=85.2
Q ss_pred CCCeEEEEcCC--ChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC---CCC---C-CCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 8 PKSVALIIGVT--GISGLSLAEALKNPTTPGSPWKVYGAARRPP---PGW---F-PTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 8 ~~~~ilVtGat--G~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~---~~~---~-~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
.+|+++||||+ +.||++++++|+ ++|++|+++.|+.. ... . .... . .+.+|++|.+++.+.++.
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la-----~~G~~Vil~~r~~~~~~~~~~~~~~~~~~-~-~~~~Dv~d~~~v~~~~~~ 76 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACF-----EQGAELAFTYLNEALKKRVEPIAQELGSD-Y-VYELDVSKPEHFKSLAES 76 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHH-----HCCCEEEEEecCHHHHHHHHHHHHhcCCc-e-EEEecCCCHHHHHHHHHH
Confidence 36899999997 799999999999 68999999888742 100 0 1122 6 789999999988877765
Q ss_pred ccc---ccceEEeecccCC-------------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 79 ISQ---EITNLFWVPLQVQ-------------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 79 ~~~---~~~~v~~~a~~~~-------------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
+.. .+|++||+|+... .++...+++|+.++..+.+++...+... .+|+++||.
T Consensus 77 i~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~---g~Iv~isS~ 145 (274)
T PRK08415 77 LKKDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDG---ASVLTLSYL 145 (274)
T ss_pred HHHHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccC---CcEEEEecC
Confidence 521 3899999998531 1345678999999888888777654211 467777763
|
|
| >PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.25 E-value=7.5e-11 Score=102.00 Aligned_cols=101 Identities=12% Similarity=0.014 Sum_probs=79.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC----CCCCCceeEEEeeCCCHHHHHHHHHhccccc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW----FPTALVDRYITFDALDPTDTALKLSLISQEI 83 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~----~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~ 83 (211)
++|+++||||||+||++++++|. ++|++|++++|++++.. .....++ .+.+|++|++++.+.+.+ +
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La-----~~G~~Vi~l~r~~~~l~~~~~~~~~~v~-~v~~Dvsd~~~v~~~l~~----I 246 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELH-----QQGAKVVALTSNSDKITLEINGEDLPVK-TLHWQVGQEAALAELLEK----V 246 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHhhcCCCeE-EEEeeCCCHHHHHHHhCC----C
Confidence 46899999999999999999999 68999999998765321 0123467 889999999988877754 7
Q ss_pred ceEEeecccCCc------hhHHHHhhcHHHHHHHHHHHHhc
Q 028258 84 TNLFWVPLQVQE------SEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 84 ~~v~~~a~~~~~------~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
|.+||+|+.... ++.+.+++|+.++.++++++...
T Consensus 247 DiLInnAGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~ 287 (406)
T PRK07424 247 DILIINHGINVHGERTPEAINKSYEVNTFSAWRLMELFFTT 287 (406)
T ss_pred CEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999876321 34567899999999999887654
|
|
| >PRK08862 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.24 E-value=2.2e-10 Score=91.89 Aligned_cols=120 Identities=10% Similarity=-0.050 Sum_probs=79.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHhc-
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSLI- 79 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~- 79 (211)
.+|+++||||++.||++++++|+ ++|++|++++|++.+.. .....+. .+.+|++|++++.+.++.+
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la-----~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~-~~~~D~~~~~~~~~~~~~~~ 77 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFA-----RLGATLILCDQDQSALKDTYEQCSALTDNVY-SFQLKDFSQESIRHLFDAIE 77 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHH-----HCCCEEEEEcCCHHHHHHHHHHHHhcCCCeE-EEEccCCCHHHHHHHHHHHH
Confidence 46899999999999999999999 69999999999765321 0123466 7889999999887766543
Q ss_pred ---ccccceEEeecccCC---c-------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeec
Q 028258 80 ---SQEITNLFWVPLQVQ---E-------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTG 133 (211)
Q Consensus 80 ---~~~~~~v~~~a~~~~---~-------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~ 133 (211)
...+|++||+++... . .+.+.+.+|..++..+++.+...+....+-..++++||
T Consensus 78 ~~~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS 144 (227)
T PRK08862 78 QQFNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVIS 144 (227)
T ss_pred HHhCCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEec
Confidence 203899999996321 1 22334566766655555444332100111246777766
|
|
| >PRK05599 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.23 E-value=4.4e-10 Score=91.01 Aligned_cols=119 Identities=19% Similarity=0.102 Sum_probs=77.9
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----C--C-CCCceeEEEeeCCCHHHHHHHHHhcc-
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----F--P-TALVDRYITFDALDPTDTALKLSLIS- 80 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----~--~-~~~~~~~i~~Dl~d~~~~~~~~~~~~- 80 (211)
|+++||||++.||.+++++|. + |++|++++|++++.. . . ...+. ++.+|++|++++.+.++.+.
T Consensus 1 ~~vlItGas~GIG~aia~~l~-----~-g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~-~~~~Dv~d~~~v~~~~~~~~~ 73 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-----H-GEDVVLAARRPEAAQGLASDLRQRGATSVH-VLSFDAQDLDTHRELVKQTQE 73 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-----C-CCEEEEEeCCHHHHHHHHHHHHhccCCceE-EEEcccCCHHHHHHHHHHHHH
Confidence 469999999999999999998 4 899999999765321 0 1 12477 89999999998877765542
Q ss_pred --cccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 81 --QEITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 81 --~~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
..+|++||+++.... .+.+...+|..+...++.++...+.....-.+++++||..
T Consensus 74 ~~g~id~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~ 139 (246)
T PRK05599 74 LAGEISLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIA 139 (246)
T ss_pred hcCCCCEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccc
Confidence 138999999886421 1123345676665554444322210011124778877743
|
|
| >KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.23 E-value=1.3e-10 Score=99.33 Aligned_cols=164 Identities=12% Similarity=0.070 Sum_probs=100.5
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC------CCCCCceeEEEeeCCCHH-HHHHHHHhccc
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW------FPTALVDRYITFDALDPT-DTALKLSLISQ 81 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~------~~~~~~~~~i~~Dl~d~~-~~~~~~~~~~~ 81 (211)
..+|||+||||.+|+-+++.|+ +.|+.|+++.|+.++.. ..+...+ .+..|..... ......+.+..
T Consensus 79 ~~~VlVvGatG~vG~~iv~~ll-----krgf~vra~VRd~~~a~~~~~~~~~d~~~~-~v~~~~~~~~d~~~~~~~~~~~ 152 (411)
T KOG1203|consen 79 PTTVLVVGATGKVGRRIVKILL-----KRGFSVRALVRDEQKAEDLLGVFFVDLGLQ-NVEADVVTAIDILKKLVEAVPK 152 (411)
T ss_pred CCeEEEecCCCchhHHHHHHHH-----HCCCeeeeeccChhhhhhhhcccccccccc-eeeeccccccchhhhhhhhccc
Confidence 4689999999999999999999 69999999999876421 1245566 6666666553 34444444321
Q ss_pred ccceEEeecccCCchh--HHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcC
Q 028258 82 EITNLFWVPLQVQESE--EVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKE 159 (211)
Q Consensus 82 ~~~~v~~~a~~~~~~~--~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e 159 (211)
....++-|++.....+ ...+.+...++.|+++||+.+ +++||+++++. ++. ++ . ...+...
T Consensus 153 ~~~~v~~~~ggrp~~ed~~~p~~VD~~g~knlvdA~~~a-----Gvk~~vlv~si---~~~--~~---~----~~~~~~~ 215 (411)
T KOG1203|consen 153 GVVIVIKGAGGRPEEEDIVTPEKVDYEGTKNLVDACKKA-----GVKRVVLVGSI---GGT--KF---N----QPPNILL 215 (411)
T ss_pred cceeEEecccCCCCcccCCCcceecHHHHHHHHHHHHHh-----CCceEEEEEee---cCc--cc---C----CCchhhh
Confidence 1223444444433221 345678899999999999887 89999999652 210 00 0 0000000
Q ss_pred CCCCCCCCCcchhHHHHHhhcCCCceEEEecCCceEecCC
Q 028258 160 DSSRLPFPNFYYELEDVSASYSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 160 ~~~~~~~~~~~~~~e~~l~~~~~~~~~~i~Rp~~i~G~~~ 199 (211)
.. ...-.+.+..++.+. +.|++++||||+...-...
T Consensus 216 ~~--~~~~~~k~~~e~~~~--~Sgl~ytiIR~g~~~~~~~ 251 (411)
T KOG1203|consen 216 LN--GLVLKAKLKAEKFLQ--DSGLPYTIIRPGGLEQDTG 251 (411)
T ss_pred hh--hhhhHHHHhHHHHHH--hcCCCcEEEeccccccCCC
Confidence 00 000011123344444 5899999999998776544
|
|
| >PRK06603 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.23 E-value=2.1e-10 Score=93.69 Aligned_cols=119 Identities=11% Similarity=-0.018 Sum_probs=83.5
Q ss_pred CCCCeEEEEcCCC--hHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC----CC-CC-CCceeEEEeeCCCHHHHHHHHHh
Q 028258 7 NPKSVALIIGVTG--ISGLSLAEALKNPTTPGSPWKVYGAARRPPPG----WF-PT-ALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 7 ~~~~~ilVtGatG--~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~----~~-~~-~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
+.+|+++||||++ .||++++++|+ ++|++|++..|+.... .. .. .... ++.+|++|++++.+.++.
T Consensus 6 ~~~k~~lITGas~~~GIG~a~a~~la-----~~G~~v~~~~r~~~~~~~~~~l~~~~g~~~-~~~~Dv~~~~~v~~~~~~ 79 (260)
T PRK06603 6 LQGKKGLITGIANNMSISWAIAQLAK-----KHGAELWFTYQSEVLEKRVKPLAEEIGCNF-VSELDVTNPKSISNLFDD 79 (260)
T ss_pred cCCcEEEEECCCCCcchHHHHHHHHH-----HcCCEEEEEeCchHHHHHHHHHHHhcCCce-EEEccCCCHHHHHHHHHH
Confidence 3468999999997 89999999999 6899999888763210 00 11 2234 678999999988877765
Q ss_pred ccc---ccceEEeecccCC-------------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 79 ISQ---EITNLFWVPLQVQ-------------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 79 ~~~---~~~~v~~~a~~~~-------------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
+.. .+|++||+++... ..+...+++|+.++..+++.+...+. .-.+++++||.
T Consensus 80 ~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~---~~G~Iv~isS~ 148 (260)
T PRK06603 80 IKEKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMH---DGGSIVTLTYY 148 (260)
T ss_pred HHHHcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhc---cCceEEEEecC
Confidence 421 3899999987521 13455778999988888887665431 11467777663
|
|
| >TIGR01500 sepiapter_red sepiapterin reductase | Back alignment and domain information |
|---|
Probab=99.23 E-value=2.6e-10 Score=92.75 Aligned_cols=122 Identities=14% Similarity=0.011 Sum_probs=81.8
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----C----CCCCceeEEEeeCCCHHHHHHHHHhccc
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----F----PTALVDRYITFDALDPTDTALKLSLISQ 81 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----~----~~~~~~~~i~~Dl~d~~~~~~~~~~~~~ 81 (211)
.++||||+++||.+++++|++.. .+.|++|+++.|+..... . ....+. ++.+|++|++++.+.++.+..
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~-~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~-~~~~Dl~~~~~v~~~~~~~~~ 79 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCL-KSPGSVLVLSARNDEALRQLKAEIGAERSGLRVV-RVSLDLGAEAGLEQLLKALRE 79 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhh-ccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEE-EEEeccCCHHHHHHHHHHHHh
Confidence 58999999999999999998200 017999999999765311 0 123577 899999999988877765432
Q ss_pred c-------cceEEeecccCC------------chhHHHHhhcHHHHHHHHHHHHhcCCCC-CCceEEEEeecC
Q 028258 82 E-------ITNLFWVPLQVQ------------ESEEVNIFKNSTMLKNVLSVLVSSNSGR-SRLRHVALLTGT 134 (211)
Q Consensus 82 ~-------~~~v~~~a~~~~------------~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~~~~~~s~~ 134 (211)
. .+++||+|+... ..+...+++|+.++..+.+.+...+... ..-.+++++||.
T Consensus 80 ~~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~ 152 (256)
T TIGR01500 80 LPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSL 152 (256)
T ss_pred ccccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCH
Confidence 1 257899987521 1233567899998877777665442111 112467777774
|
This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. |
| >KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.19 E-value=6.3e-10 Score=93.18 Aligned_cols=122 Identities=15% Similarity=0.025 Sum_probs=87.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC---------CCCCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG---------WFPTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~---------~~~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
..++++|||||++||.+++++|+ .+|.+|+...|+.... ......+. ++.+|+++.+++.+..+.
T Consensus 34 ~~~~~vVTGansGIG~eta~~La-----~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~-~~~lDLssl~SV~~fa~~ 107 (314)
T KOG1208|consen 34 SGKVALVTGATSGIGFETARELA-----LRGAHVVLACRNEERGEEAKEQIQKGKANQKIR-VIQLDLSSLKSVRKFAEE 107 (314)
T ss_pred CCcEEEEECCCCchHHHHHHHHH-----hCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceE-EEECCCCCHHHHHHHHHH
Confidence 46899999999999999999999 6899999999987431 11245667 899999999988776654
Q ss_pred cc---cccceEEeecccCCc-------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCee
Q 028258 79 IS---QEITNLFWVPLQVQE-------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKH 136 (211)
Q Consensus 79 ~~---~~~~~v~~~a~~~~~-------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~ 136 (211)
.. ...|++|+.||.... ..+..+.+|..|...|.+.+...++.+.. .|||.+||...
T Consensus 108 ~~~~~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~-~RIV~vsS~~~ 174 (314)
T KOG1208|consen 108 FKKKEGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAP-SRIVNVSSILG 174 (314)
T ss_pred HHhcCCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCC-CCEEEEcCccc
Confidence 42 248889998887432 23446788988766655555433211222 78888888654
|
|
| >PLN00015 protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=99.13 E-value=5.1e-10 Score=93.64 Aligned_cols=119 Identities=14% Similarity=0.112 Sum_probs=84.2
Q ss_pred EEEcCCChHHHHHHHHhhCCCCCCCC-cEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHhcc---c
Q 028258 13 LIIGVTGISGLSLAEALKNPTTPGSP-WKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSLIS---Q 81 (211)
Q Consensus 13 lVtGatG~iG~~l~~~L~~~~~~~~g-~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~---~ 81 (211)
+|||||++||.+++++|+ ++| ++|+++.|+..... .....+. ++.+|++|.+++.++++.+. .
T Consensus 1 lITGas~GIG~aia~~l~-----~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~-~~~~Dl~d~~~v~~~~~~~~~~~~ 74 (308)
T PLN00015 1 IITGASSGLGLATAKALA-----ETGKWHVVMACRDFLKAERAAKSAGMPKDSYT-VMHLDLASLDSVRQFVDNFRRSGR 74 (308)
T ss_pred CEeCCCChHHHHHHHHHH-----HCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEE-EEEecCCCHHHHHHHHHHHHhcCC
Confidence 699999999999999999 688 99999998754311 0123577 88999999998877776542 1
Q ss_pred ccceEEeecccCC----------chhHHHHhhcHHHHHHHHHHHHhcCCCCCC-ceEEEEeecCeee
Q 028258 82 EITNLFWVPLQVQ----------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSR-LRHVALLTGTKHY 137 (211)
Q Consensus 82 ~~~~v~~~a~~~~----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~~~~~~s~~~~y 137 (211)
.+|++||+|+... ..+...+++|+.++..+++.+...+..... -.+|+++||...+
T Consensus 75 ~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~ 141 (308)
T PLN00015 75 PLDVLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGN 141 (308)
T ss_pred CCCEEEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccc
Confidence 3899999997631 133457799999877776665543211110 3578888886543
|
|
| >PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=99.12 E-value=7.9e-10 Score=85.66 Aligned_cols=115 Identities=22% Similarity=0.211 Sum_probs=78.4
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC-CCC---------CCCCCceeEEEeeCCCHHHHHHHHHhcc
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP-PGW---------FPTALVDRYITFDALDPTDTALKLSLIS 80 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~-~~~---------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~ 80 (211)
++||||++|.+|..+++.|++ ...-+|+.+.|+.. ... .....++ ++.+|++|++++.++++.+.
T Consensus 2 tylitGG~gglg~~la~~La~----~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~-~~~~Dv~d~~~v~~~~~~~~ 76 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAE----RGARRLILLGRSGAPSAEAEAAIRELESAGARVE-YVQCDVTDPEAVAAALAQLR 76 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHH----TT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEE-EEE--TTSHHHHHHHHHTSH
T ss_pred EEEEECCccHHHHHHHHHHHH----cCCCEEEEeccCCCccHHHHHHHHHHHhCCCcee-eeccCccCHHHHHHHHHHHH
Confidence 689999999999999999994 33456999999832 211 1235678 89999999999999998774
Q ss_pred c---ccceEEeecccCCc------h---hHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 81 Q---EITNLFWVPLQVQE------S---EEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 81 ~---~~~~v~~~a~~~~~------~---~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
. +++.|||+++.... + ....+..-+.++.+|.+++... .+.+|++.||..
T Consensus 77 ~~~~~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~-----~l~~~i~~SSis 138 (181)
T PF08659_consen 77 QRFGPIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENR-----PLDFFILFSSIS 138 (181)
T ss_dssp TTSS-EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTT-----TTSEEEEEEEHH
T ss_pred hccCCcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcC-----CCCeEEEECChh
Confidence 2 37889999987432 2 2234566678889998888765 678888888754
|
It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B .... |
| >COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.12 E-value=1.1e-09 Score=84.93 Aligned_cols=164 Identities=10% Similarity=-0.034 Sum_probs=106.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC---CCCCCceeEEEeeCCCHHHHHHHHH----hcc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW---FPTALVDRYITFDALDPTDTALKLS----LIS 80 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~---~~~~~~~~~i~~Dl~d~~~~~~~~~----~~~ 80 (211)
.+-+||||||+.+||.+++++|. +.|-+|+++.|+..... ...+.+. ...||+.|.++..+.++ ..+
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~-----elgN~VIi~gR~e~~L~e~~~~~p~~~-t~v~Dv~d~~~~~~lvewLkk~~P 77 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFL-----ELGNTVIICGRNEERLAEAKAENPEIH-TEVCDVADRDSRRELVEWLKKEYP 77 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHH-----HhCCEEEEecCcHHHHHHHHhcCcchh-eeeecccchhhHHHHHHHHHhhCC
Confidence 35689999999999999999999 68999999999876421 2357888 89999999986554443 333
Q ss_pred cccceEEeecccCCc-----------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCC
Q 028258 81 QEITNLFWVPLQVQE-----------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQ 149 (211)
Q Consensus 81 ~~~~~v~~~a~~~~~-----------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~ 149 (211)
. +++++++||.... +..+..++|..++.+|...+..+.-..+ -..++-+||+-.+.
T Consensus 78 ~-lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~-~a~IInVSSGLafv----------- 144 (245)
T COG3967 78 N-LNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQP-EATIINVSSGLAFV----------- 144 (245)
T ss_pred c-hheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCC-CceEEEeccccccC-----------
Confidence 3 8889999987432 1234568898877777666654421122 34567777654332
Q ss_pred CCCCCCCCcCCCCCCCCCCcc-hhHHHHHhh--cCCCceEEEecCCceEec
Q 028258 150 LMPYEVPFKEDSSRLPFPNFY-YELEDVSAS--YSPAITYSVHRSSVIIGA 197 (211)
Q Consensus 150 ~~~~~~~~~e~~~~~~~~~~~-~~~e~~l~~--~~~~~~~~i~Rp~~i~G~ 197 (211)
..+..|.+...+.. ......|++ +..++.++-+-|..|--.
T Consensus 145 -------Pm~~~PvYcaTKAaiHsyt~aLR~Qlk~t~veVIE~~PP~V~t~ 188 (245)
T COG3967 145 -------PMASTPVYCATKAAIHSYTLALREQLKDTSVEVIELAPPLVDTT 188 (245)
T ss_pred -------cccccccchhhHHHHHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence 12233322211100 112233443 457899999999888764
|
|
| >KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.09 E-value=4.9e-09 Score=82.43 Aligned_cols=104 Identities=14% Similarity=0.033 Sum_probs=76.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCC-CCCC------C-CCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR-PPPG------W-FPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~-~~~~------~-~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
.++.++||||+.+||-.|+++|++ ..|.++++..|+ +++. + ..+++++ .++.|++..+++.+..+++
T Consensus 2 spksv~ItGaNRGIGlgLVk~llk----~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvH-ii~Ldvt~deS~~~~~~~V 76 (249)
T KOG1611|consen 2 SPKSVFITGANRGIGLGLVKELLK----DKGIEVIIATARDPEKAATELALKSKSDSRVH-IIQLDVTCDESIDNFVQEV 76 (249)
T ss_pred CCccEEEeccCcchhHHHHHHHhc----CCCcEEEEEecCChHHhhHHHHHhhccCCceE-EEEEecccHHHHHHHHHHH
Confidence 347799999999999999999997 678887666655 5441 1 1378999 9999999998888877665
Q ss_pred cc-----ccceEEeecccCC----------chhHHHHhhcHHHHHHHHHHHH
Q 028258 80 SQ-----EITNLFWVPLQVQ----------ESEEVNIFKNSTMLKNVLSVLV 116 (211)
Q Consensus 80 ~~-----~~~~v~~~a~~~~----------~~~~~~~~~n~~~~~~l~~~~~ 116 (211)
.. .++.++++|+... ..+.+.+++|..+...+.+++.
T Consensus 77 ~~iVg~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~l 128 (249)
T KOG1611|consen 77 EKIVGSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFL 128 (249)
T ss_pred HhhcccCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHH
Confidence 43 2677888887632 1355678999877655555443
|
|
| >KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.01 E-value=1.6e-09 Score=84.47 Aligned_cols=123 Identities=16% Similarity=0.085 Sum_probs=87.1
Q ss_pred CCCCeEEEEc-CCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-C-CCCCceeEEEeeCCCHHHHHHHHHhccc--
Q 028258 7 NPKSVALIIG-VTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-F-PTALVDRYITFDALDPTDTALKLSLISQ-- 81 (211)
Q Consensus 7 ~~~~~ilVtG-atG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-~-~~~~~~~~i~~Dl~d~~~~~~~~~~~~~-- 81 (211)
...|+||||| ++|+||.+|+++|. +.||.|++++|+.+... + ...++. ..++|+++++++.+....+..
T Consensus 5 ~~~k~VlItgcs~GGIG~ala~ef~-----~~G~~V~AtaR~~e~M~~L~~~~gl~-~~kLDV~~~~~V~~v~~evr~~~ 78 (289)
T KOG1209|consen 5 SQPKKVLITGCSSGGIGYALAKEFA-----RNGYLVYATARRLEPMAQLAIQFGLK-PYKLDVSKPEEVVTVSGEVRANP 78 (289)
T ss_pred cCCCeEEEeecCCcchhHHHHHHHH-----hCCeEEEEEccccchHhhHHHhhCCe-eEEeccCChHHHHHHHHHHhhCC
Confidence 3468889888 77999999999999 69999999999877532 1 246788 999999999988776554422
Q ss_pred --ccceEEeecccCC--c-------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeee
Q 028258 82 --EITNLFWVPLQVQ--E-------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 137 (211)
Q Consensus 82 --~~~~v~~~a~~~~--~-------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y 137 (211)
.+|++++.|+..- + .-+..+++|+.|..++.+++.+.+. .....++.+.|...|
T Consensus 79 ~Gkld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~li--kaKGtIVnvgSl~~~ 143 (289)
T KOG1209|consen 79 DGKLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLI--KAKGTIVNVGSLAGV 143 (289)
T ss_pred CCceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHH--HccceEEEecceeEE
Confidence 3788999887631 1 2234678898877676666654321 112456666665555
|
|
| >KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.99 E-value=4e-09 Score=81.22 Aligned_cols=120 Identities=15% Similarity=-0.000 Sum_probs=85.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----CCCCCceeEEEeeCCCHHHHHHHHH----h
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----FPTALVDRYITFDALDPTDTALKLS----L 78 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~----~ 78 (211)
|.|.++||||+..||++++..|. ..|++|.+.+++..... +..++-+..+.||+++.++++..++ .
T Consensus 13 ~sk~~~vtGg~sGIGrAia~~la-----~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~ 87 (256)
T KOG1200|consen 13 MSKVAAVTGGSSGIGRAIAQLLA-----KKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKS 87 (256)
T ss_pred hcceeEEecCCchHHHHHHHHHH-----hcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHh
Confidence 57899999999999999999999 79999999888655311 1222233267899999987655444 3
Q ss_pred cccccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcC--CCCCCceEEEEeecC
Q 028258 79 ISQEITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSN--SGRSRLRHVALLTGT 134 (211)
Q Consensus 79 ~~~~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~~~~~~~~s~~ 134 (211)
+. .|+++++||+... .+|++.+.+|+.++....+++.+.+ ..+ +--.++-+||.
T Consensus 88 ~g-~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~-~~~sIiNvsSI 152 (256)
T KOG1200|consen 88 LG-TPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQ-QGLSIINVSSI 152 (256)
T ss_pred cC-CCcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcC-CCceEEeehhh
Confidence 43 4899999999854 3788889999999877777665542 111 11256666663
|
|
| >KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.99 E-value=2.6e-08 Score=81.99 Aligned_cols=124 Identities=15% Similarity=-0.017 Sum_probs=85.7
Q ss_pred cCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC----------CCCCCceeEEEeeCCCHHHHHH
Q 028258 5 DQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW----------FPTALVDRYITFDALDPTDTAL 74 (211)
Q Consensus 5 ~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~----------~~~~~~~~~i~~Dl~d~~~~~~ 74 (211)
.....|++|||||+..||+++|++|. +.|.+|++..|+++... .....+. .+.+|+++.+.+.+
T Consensus 4 ~~l~gkvalVTG~s~GIG~aia~~la-----~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~~~~ 77 (270)
T KOG0725|consen 4 GRLAGKVALVTGGSSGIGKAIALLLA-----KAGAKVVITGRSEERLEETAQELGGLGYTGGKVL-AIVCDVSKEVDVEK 77 (270)
T ss_pred ccCCCcEEEEECCCChHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeE-EEECcCCCHHHHHH
Confidence 34467999999999999999999999 69999999999876411 1134577 88999998876544
Q ss_pred HH----HhcccccceEEeecccCCc----------hhHHHHhhcHHH-HHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 75 KL----SLISQEITNLFWVPLQVQE----------SEEVNIFKNSTM-LKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 75 ~~----~~~~~~~~~v~~~a~~~~~----------~~~~~~~~n~~~-~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
.+ +.....+|.+++.|+.... .|+..+++|+.+ +.++..++...+. ..+-..++++|+..
T Consensus 78 l~~~~~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~-~~~gg~I~~~ss~~ 152 (270)
T KOG0725|consen 78 LVEFAVEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLK-KSKGGSIVNISSVA 152 (270)
T ss_pred HHHHHHHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHH-hcCCceEEEEeccc
Confidence 43 3322238999999876431 455677899984 5566665554421 11234566766654
|
|
| >KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.96 E-value=5.8e-09 Score=85.71 Aligned_cols=118 Identities=22% Similarity=0.123 Sum_probs=89.1
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC------C---CCCCCceeEEEeeCCCHHHHHHHHHhcc
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG------W---FPTALVDRYITFDALDPTDTALKLSLIS 80 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~------~---~~~~~~~~~i~~Dl~d~~~~~~~~~~~~ 80 (211)
++++|||+|..+|..++.++. .+|.+|+++.|+..+. + .....+. +.++|+.|.+++...++++.
T Consensus 34 ~hi~itggS~glgl~la~e~~-----~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~-~~S~d~~~Y~~v~~~~~~l~ 107 (331)
T KOG1210|consen 34 RHILITGGSSGLGLALALECK-----REGADVTITARSGKKLLEAKAELELLTQVEDVS-YKSVDVIDYDSVSKVIEELR 107 (331)
T ss_pred ceEEEecCcchhhHHHHHHHH-----HccCceEEEeccHHHHHHHHhhhhhhhccceee-EeccccccHHHHHHHHhhhh
Confidence 689999999999999999999 6999999999976541 1 1224477 89999999999988888774
Q ss_pred ---cccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeec
Q 028258 81 ---QEITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTG 133 (211)
Q Consensus 81 ---~~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~ 133 (211)
..+|++|+||+..-+ .-...+++|..++.|+..++...+....+..+++++||
T Consensus 108 ~~~~~~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS 172 (331)
T KOG1210|consen 108 DLEGPIDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSS 172 (331)
T ss_pred hccCCcceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehh
Confidence 249999999987432 22346799999999998888766421212236776665
|
|
| >KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.96 E-value=9.2e-09 Score=84.16 Aligned_cols=123 Identities=11% Similarity=-0.054 Sum_probs=86.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC------CCCCCceeEEEeeCCCHHHHHHHHHhccc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW------FPTALVDRYITFDALDPTDTALKLSLISQ 81 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~ 81 (211)
.+++||||||++++|+.++.+|+ +.|..+.+.+.+..... .....++ ...||++|++++.+..+.+..
T Consensus 37 ~g~~vLITGgg~GlGr~ialefa-----~rg~~~vl~Din~~~~~etv~~~~~~g~~~-~y~cdis~~eei~~~a~~Vk~ 110 (300)
T KOG1201|consen 37 SGEIVLITGGGSGLGRLIALEFA-----KRGAKLVLWDINKQGNEETVKEIRKIGEAK-AYTCDISDREEIYRLAKKVKK 110 (300)
T ss_pred cCCEEEEeCCCchHHHHHHHHHH-----HhCCeEEEEeccccchHHHHHHHHhcCcee-EEEecCCCHHHHHHHHHHHHH
Confidence 47899999999999999999999 68888888888776421 0113678 899999999988776655542
Q ss_pred ---ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeee
Q 028258 82 ---EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 137 (211)
Q Consensus 82 ---~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y 137 (211)
+|+.+++.|+.... .-+..+++|+.+.....++....|-.. +-.|+|-++|..-+
T Consensus 111 e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~-~~GHIV~IaS~aG~ 177 (300)
T KOG1201|consen 111 EVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLEN-NNGHIVTIASVAGL 177 (300)
T ss_pred hcCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhc-CCceEEEehhhhcc
Confidence 38999999987431 123467899887655555444332000 23688877775443
|
|
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=98.94 E-value=1.3e-08 Score=104.04 Aligned_cols=118 Identities=17% Similarity=0.172 Sum_probs=89.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC----CC-------------------------------
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP----GW------------------------------- 52 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~----~~------------------------------- 52 (211)
.++++|||||+++||.+++++|++ ..|.+|+++.|++.. .|
T Consensus 1996 ~g~vvLVTGGarGIG~aiA~~LA~----~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~ 2071 (2582)
T TIGR02813 1996 SDDVFLVTGGAKGVTFECALELAK----QCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDA 2071 (2582)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHH----hcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhh
Confidence 468999999999999999999994 347899999998210 00
Q ss_pred -------------------CCCCCceeEEEeeCCCHHHHHHHHHhccc--ccceEEeecccCC---------chhHHHHh
Q 028258 53 -------------------FPTALVDRYITFDALDPTDTALKLSLISQ--EITNLFWVPLQVQ---------ESEEVNIF 102 (211)
Q Consensus 53 -------------------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~--~~~~v~~~a~~~~---------~~~~~~~~ 102 (211)
.....+. ++.+|++|.+++.++++.+.. .+|.|||+|+... .++...++
T Consensus 2072 ~~~~~~~~~ei~~~la~l~~~G~~v~-y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~ 2150 (2582)
T TIGR02813 2072 LVRPVLSSLEIAQALAAFKAAGASAE-YASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYG 2150 (2582)
T ss_pred cccccchhHHHHHHHHHHHhcCCcEE-EEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHH
Confidence 0023467 889999999988888766531 3899999998632 14566789
Q ss_pred hcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 103 KNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 103 ~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
+|+.|+.++++++... ..++|+++||..
T Consensus 2151 ~nv~G~~~Ll~al~~~-----~~~~IV~~SSva 2178 (2582)
T TIGR02813 2151 TKVDGLLSLLAALNAE-----NIKLLALFSSAA 2178 (2582)
T ss_pred HHHHHHHHHHHHHHHh-----CCCeEEEEechh
Confidence 9999999999998765 356788888754
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=98.93 E-value=9.1e-09 Score=83.06 Aligned_cols=119 Identities=17% Similarity=0.036 Sum_probs=84.9
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC--C----CCC----CCceeEEEeeCCC-HHHHHHH
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG--W----FPT----ALVDRYITFDALD-PTDTALK 75 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~--~----~~~----~~~~~~i~~Dl~d-~~~~~~~ 75 (211)
+++|++|||||++.||.++++.|+ ++|++|+++.|+.... . ... ..+. ...+|+++ .+++...
T Consensus 3 ~~~~~ilITGas~GiG~aia~~l~-----~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dvs~~~~~v~~~ 76 (251)
T COG1028 3 LSGKVALVTGASSGIGRAIARALA-----REGARVVVAARRSEEEAAEALAAAIKEAGGGRAA-AVAADVSDDEESVEAL 76 (251)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHH-----HCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEE-EEEecCCCCHHHHHHH
Confidence 456899999999999999999999 6999988888775431 0 011 2456 77899998 8877766
Q ss_pred HHhccc---ccceEEeecccCC----------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 76 LSLISQ---EITNLFWVPLQVQ----------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 76 ~~~~~~---~~~~v~~~a~~~~----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
++.+.. .+|.++++|+... ..+...+.+|+.+...+.+++...+. -++++.+||..
T Consensus 77 ~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~----~~~Iv~isS~~ 145 (251)
T COG1028 77 VAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMK----KQRIVNISSVA 145 (251)
T ss_pred HHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhh----hCeEEEECCch
Confidence 655433 2788999988632 13456789999988888875555421 11778777753
|
|
| >PLN02730 enoyl-[acyl-carrier-protein] reductase | Back alignment and domain information |
|---|
Probab=98.92 E-value=5.8e-08 Score=81.22 Aligned_cols=118 Identities=17% Similarity=0.082 Sum_probs=78.8
Q ss_pred CCCCeEEEEcC--CChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC----------C------CCCC----CceeEEEe
Q 028258 7 NPKSVALIIGV--TGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG----------W------FPTA----LVDRYITF 64 (211)
Q Consensus 7 ~~~~~ilVtGa--tG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~----------~------~~~~----~~~~~i~~ 64 (211)
.++|++||||| |..||.+++++|. +.|.+|++ .|+.... . .... ... .+.+
T Consensus 7 l~gk~alITGa~~s~GIG~a~A~~la-----~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 79 (303)
T PLN02730 7 LRGKRAFIAGVADDNGYGWAIAKALA-----AAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITK-VYPL 79 (303)
T ss_pred CCCCEEEEeCCCCCCcHHHHHHHHHH-----HCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCe-eeec
Confidence 56899999999 8999999999999 79999887 4432210 0 0001 135 6788
Q ss_pred eC--CCHH------------------HHHHHHHhccc---ccceEEeecccC----C-------chhHHHHhhcHHHHHH
Q 028258 65 DA--LDPT------------------DTALKLSLISQ---EITNLFWVPLQV----Q-------ESEEVNIFKNSTMLKN 110 (211)
Q Consensus 65 Dl--~d~~------------------~~~~~~~~~~~---~~~~v~~~a~~~----~-------~~~~~~~~~n~~~~~~ 110 (211)
|+ ++++ ++...++.+.. .+|.+||+|+.. . .++...+++|+.++..
T Consensus 80 D~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~ 159 (303)
T PLN02730 80 DAVFDTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVS 159 (303)
T ss_pred ceecCccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHH
Confidence 98 3332 55555554321 389999998531 1 1456678999999888
Q ss_pred HHHHHHhcCCCCCCceEEEEeecC
Q 028258 111 VLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 111 l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
+++++...+... .+++++||.
T Consensus 160 l~~~~~p~m~~~---G~II~isS~ 180 (303)
T PLN02730 160 LLQHFGPIMNPG---GASISLTYI 180 (303)
T ss_pred HHHHHHHHHhcC---CEEEEEech
Confidence 888877654211 467777763
|
|
| >PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.88 E-value=1.6e-08 Score=81.60 Aligned_cols=101 Identities=19% Similarity=0.137 Sum_probs=78.1
Q ss_pred HHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccceEEeecccCC-chhHHHHhh
Q 028258 25 LAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITNLFWVPLQVQ-ESEEVNIFK 103 (211)
Q Consensus 25 l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~~~a~~~~-~~~~~~~~~ 103 (211)
++++|+ ++|++|++++|++.+. ...+ ++.+|++|.+++.+.++.+...+|++||+|+... .++...+++
T Consensus 1 ~a~~l~-----~~G~~Vv~~~r~~~~~----~~~~-~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~~~~~~~~~~v 70 (241)
T PRK12428 1 TARLLR-----FLGARVIGVDRREPGM----TLDG-FIQADLGDPASIDAAVAALPGRIDALFNIAGVPGTAPVELVARV 70 (241)
T ss_pred ChHHHH-----hCCCEEEEEeCCcchh----hhhH-hhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCCCCCHHHhhhh
Confidence 467888 6999999999986642 2346 7899999999999888875333899999998743 356778899
Q ss_pred cHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeee
Q 028258 104 NSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYM 138 (211)
Q Consensus 104 n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~ 138 (211)
|+.++..+++.+...+. .-.+|+++||...|+
T Consensus 71 N~~~~~~l~~~~~~~~~---~~g~Iv~isS~~~~~ 102 (241)
T PRK12428 71 NFLGLRHLTEALLPRMA---PGGAIVNVASLAGAE 102 (241)
T ss_pred chHHHHHHHHHHHHhcc---CCcEEEEeCcHHhhc
Confidence 99999999998876531 125888998877765
|
|
| >PRK08309 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.86 E-value=1.2e-08 Score=78.84 Aligned_cols=98 Identities=17% Similarity=0.042 Sum_probs=69.4
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----C-CCCCceeEEEeeCCCHHHHHHHHHhccc---
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----F-PTALVDRYITFDALDPTDTALKLSLISQ--- 81 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----~-~~~~~~~~i~~Dl~d~~~~~~~~~~~~~--- 81 (211)
+++|||||||+|. +++.|+ +.||+|++++|++.... . ....+. .+.+|++|++++.+.++++..
T Consensus 2 ~vlVtGGtG~gg~-la~~L~-----~~G~~V~v~~R~~~~~~~l~~~l~~~~~i~-~~~~Dv~d~~sv~~~i~~~l~~~g 74 (177)
T PRK08309 2 HALVIGGTGMLKR-VSLWLC-----EKGFHVSVIARREVKLENVKRESTTPESIT-PLPLDYHDDDALKLAIKSTIEKNG 74 (177)
T ss_pred EEEEECcCHHHHH-HHHHHH-----HCcCEEEEEECCHHHHHHHHHHhhcCCcEE-EEEccCCCHHHHHHHHHHHHHHcC
Confidence 6899999998876 999999 68999999999754311 0 124577 889999999988888765421
Q ss_pred ccceEEeecccCCchhHHHHhhcHHHHHHHHHHHHhcCCCCCCce----EEEEeec
Q 028258 82 EITNLFWVPLQVQESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLR----HVALLTG 133 (211)
Q Consensus 82 ~~~~v~~~a~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~----~~~~~s~ 133 (211)
.+|.+|+.. .+.+..++..+++.. +++ +|+++=|
T Consensus 75 ~id~lv~~v-------------h~~~~~~~~~~~~~~-----gv~~~~~~~~h~~g 112 (177)
T PRK08309 75 PFDLAVAWI-------------HSSAKDALSVVCREL-----DGSSETYRLFHVLG 112 (177)
T ss_pred CCeEEEEec-------------cccchhhHHHHHHHH-----ccCCCCceEEEEeC
Confidence 256665444 233456788888887 455 6665533
|
|
| >KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=98.79 E-value=5.2e-08 Score=76.84 Aligned_cols=118 Identities=21% Similarity=0.146 Sum_probs=82.9
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC--------CCCCCCCceeEEEeeCCCHHHHHHHHHhcc
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP--------GWFPTALVDRYITFDALDPTDTALKLSLIS 80 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~--------~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~ 80 (211)
+|++++||+.|+||++++++|+ .+|..+.++.-+.+. .......+- ++++|+++..++++.++.+-
T Consensus 5 GKna~vtggagGIGl~~sk~Ll-----~kgik~~~i~~~~En~~a~akL~ai~p~~~v~-F~~~DVt~~~~~~~~f~ki~ 78 (261)
T KOG4169|consen 5 GKNALVTGGAGGIGLATSKALL-----EKGIKVLVIDDSEENPEAIAKLQAINPSVSVI-FIKCDVTNRGDLEAAFDKIL 78 (261)
T ss_pred CceEEEecCCchhhHHHHHHHH-----HcCchheeehhhhhCHHHHHHHhccCCCceEE-EEEeccccHHHHHHHHHHHH
Confidence 7999999999999999999999 688886665544332 112345677 89999999988777766542
Q ss_pred c---ccceEEeecccCC-chhHHHHhhcHHHHHH----HHHHHHhcCCCCCCceEEEEeecC
Q 028258 81 Q---EITNLFWVPLQVQ-ESEEVNIFKNSTMLKN----VLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 81 ~---~~~~v~~~a~~~~-~~~~~~~~~n~~~~~~----l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
. .+|++|+.|+... .+++.+..+|+.+..+ .++.+.+..++- -.-++-.||.
T Consensus 79 ~~fg~iDIlINgAGi~~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~--GGiIvNmsSv 138 (261)
T KOG4169|consen 79 ATFGTIDILINGAGILDDKDWERTINVNLTGVINGTQLALPYMDKKQGGK--GGIIVNMSSV 138 (261)
T ss_pred HHhCceEEEEcccccccchhHHHhhccchhhhhhhhhhhhhhhhhhcCCC--CcEEEEeccc
Confidence 2 3899999999865 4888999999876555 444444432222 2344666653
|
|
| >PRK06720 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.74 E-value=2.5e-08 Score=76.52 Aligned_cols=80 Identities=19% Similarity=0.052 Sum_probs=60.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHhcc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSLIS 80 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~ 80 (211)
.+|+++||||+|+||+++++.|. +.|++|++++|+..... .....+. .+.+|+++.+++.+.++.+.
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~-----~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~-~~~~Dl~~~~~v~~~v~~~~ 88 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLA-----KQGAKVIVTDIDQESGQATVEEITNLGGEAL-FVSYDMEKQGDWQRVISITL 88 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHHHhcCCcEE-EEEccCCCHHHHHHHHHHHH
Confidence 46899999999999999999999 68999999998754310 0123456 78999999988766554321
Q ss_pred ---cccceEEeecccC
Q 028258 81 ---QEITNLFWVPLQV 93 (211)
Q Consensus 81 ---~~~~~v~~~a~~~ 93 (211)
..+|.+||+|+..
T Consensus 89 ~~~G~iDilVnnAG~~ 104 (169)
T PRK06720 89 NAFSRIDMLFQNAGLY 104 (169)
T ss_pred HHcCCCCEEEECCCcC
Confidence 1389999999763
|
|
| >PTZ00325 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.71 E-value=3.1e-07 Score=77.31 Aligned_cols=115 Identities=11% Similarity=0.019 Sum_probs=82.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC---CCCCCCceeEEEeeCCCHHHHHHHHHhcccccc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG---WFPTALVDRYITFDALDPTDTALKLSLISQEIT 84 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~---~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~ 84 (211)
++++|+|+||+|.||+.++..|... ...+++..+++..... .+.+.... ....+.+|+.++.+.+++ .|
T Consensus 7 ~~~KI~IiGaaG~VGs~~a~~l~~~---~~~~elvL~Di~~~~g~a~Dl~~~~~~-~~v~~~td~~~~~~~l~g----aD 78 (321)
T PTZ00325 7 KMFKVAVLGAAGGIGQPLSLLLKQN---PHVSELSLYDIVGAPGVAADLSHIDTP-AKVTGYADGELWEKALRG----AD 78 (321)
T ss_pred CCCEEEEECCCCHHHHHHHHHHhcC---CCCCEEEEEecCCCcccccchhhcCcC-ceEEEecCCCchHHHhCC----CC
Confidence 3468999999999999999998731 2346799998843222 11122224 445667665555666776 57
Q ss_pred eEEeecccCCc---hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 85 NLFWVPLQVQE---SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 85 ~v~~~a~~~~~---~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
.|+++++.... ++.+....|..+++++++++.++ +++++++++|--
T Consensus 79 vVVitaG~~~~~~~tR~dll~~N~~i~~~i~~~i~~~-----~~~~iviv~SNP 127 (321)
T PTZ00325 79 LVLICAGVPRKPGMTRDDLFNTNAPIVRDLVAAVASS-----APKAIVGIVSNP 127 (321)
T ss_pred EEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-----CCCeEEEEecCc
Confidence 89999988542 46778899999999999999998 678888887743
|
|
| >PRK06300 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.69 E-value=1.7e-06 Score=72.34 Aligned_cols=117 Identities=15% Similarity=0.063 Sum_probs=71.7
Q ss_pred CCCCeEEEEcCC--ChHHHHHHHHhhCCCCCCCCcEEEEEeCCC---------CCCCC-------CCC-----CceeEEE
Q 028258 7 NPKSVALIIGVT--GISGLSLAEALKNPTTPGSPWKVYGAARRP---------PPGWF-------PTA-----LVDRYIT 63 (211)
Q Consensus 7 ~~~~~ilVtGat--G~iG~~l~~~L~~~~~~~~g~~V~~~~R~~---------~~~~~-------~~~-----~~~~~i~ 63 (211)
.++|+++||||+ ..||+++++.|. ++|++|++.+|.+ ..... ... .+. .+.
T Consensus 6 ~~gk~alITGa~~~~GIG~a~A~~la-----~~Ga~Vvv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~ 79 (299)
T PRK06300 6 LTGKIAFIAGIGDDQGYGWGIAKALA-----EAGATILVGTWVPIYKIFSQSLELGKFDASRKLSNGSLLTFAKIY-PMD 79 (299)
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHH-----HCCCEEEEEeccchhhhhhhhcccccccccccccccchhhhhhHH-Hhh
Confidence 357999999995 999999999999 7999998866431 00000 000 011 112
Q ss_pred eeCCCHH------------------HHHHHHHh----cccccceEEeecccC----C-------chhHHHHhhcHHHHHH
Q 028258 64 FDALDPT------------------DTALKLSL----ISQEITNLFWVPLQV----Q-------ESEEVNIFKNSTMLKN 110 (211)
Q Consensus 64 ~Dl~d~~------------------~~~~~~~~----~~~~~~~v~~~a~~~----~-------~~~~~~~~~n~~~~~~ 110 (211)
.|+++++ ++.+.++. .. .+|.+||+|+.. . .++...+++|+.+..+
T Consensus 80 ~d~~~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G-~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~ 158 (299)
T PRK06300 80 ASFDTPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFG-HIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVS 158 (299)
T ss_pred hhcCCCEEeecccCccccccCCCHHHHHHHHHHHHHHcC-CCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHH
Confidence 3333332 24444433 33 389999998642 1 1455677999999999
Q ss_pred HHHHHHhcCCCCCCceEEEEeec
Q 028258 111 VLSVLVSSNSGRSRLRHVALLTG 133 (211)
Q Consensus 111 l~~~~~~~~~~~~~~~~~~~~s~ 133 (211)
+.+++...+... .+++.+++
T Consensus 159 l~~a~~p~m~~~---G~ii~iss 178 (299)
T PRK06300 159 LLSHFGPIMNPG---GSTISLTY 178 (299)
T ss_pred HHHHHHHHhhcC---CeEEEEee
Confidence 988887764211 34555554
|
|
| >cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases | Back alignment and domain information |
|---|
Probab=98.67 E-value=2.6e-07 Score=78.04 Aligned_cols=104 Identities=13% Similarity=0.050 Sum_probs=68.6
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCC--CCCcEEEEEeCCCCCCCCCCCCceeEE------EeeCCCHHHHHHHHHhccc
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTP--GSPWKVYGAARRPPPGWFPTALVDRYI------TFDALDPTDTALKLSLISQ 81 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~--~~g~~V~~~~R~~~~~~~~~~~~~~~i------~~Dl~d~~~~~~~~~~~~~ 81 (211)
-+|+||||+|++|++++..|+..+-- .++++|+++++++..........+ +. ..|+....++.+.+++
T Consensus 3 ~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~D-l~d~~~~~~~~~~~~~~~~~~l~~--- 78 (325)
T cd01336 3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVME-LQDCAFPLLKSVVATTDPEEAFKD--- 78 (325)
T ss_pred eEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeee-hhhccccccCCceecCCHHHHhCC---
Confidence 47999999999999999999831110 134689999996542111110111 11 1133333445556665
Q ss_pred ccceEEeecccCCc---hhHHHHhhcHHHHHHHHHHHHhc
Q 028258 82 EITNLFWVPLQVQE---SEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 82 ~~~~v~~~a~~~~~---~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
+|.|||+|+.... +..+.++.|+...+.+.+.+.++
T Consensus 79 -aDiVI~tAG~~~~~~~~R~~l~~~N~~i~~~i~~~i~~~ 117 (325)
T cd01336 79 -VDVAILVGAMPRKEGMERKDLLKANVKIFKEQGEALDKY 117 (325)
T ss_pred -CCEEEEeCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 6899999998543 44678899999999999988887
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=98.67 E-value=1.3e-06 Score=72.06 Aligned_cols=157 Identities=14% Similarity=0.099 Sum_probs=101.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC-----CCCCCCceeEEEeeCCCHHHHHHHHHhccc-
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-----WFPTALVDRYITFDALDPTDTALKLSLISQ- 81 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~-----~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~- 81 (211)
..|-|||||.=...|+.++++|. ++|+.|.+---.++.. +...++.+ .+..|+++++++.++.+-+..
T Consensus 28 ~~k~VlITGCDSGfG~~LA~~L~-----~~Gf~V~Agcl~~~gae~L~~~~~s~rl~-t~~LDVT~~esi~~a~~~V~~~ 101 (322)
T KOG1610|consen 28 SDKAVLITGCDSGFGRLLAKKLD-----KKGFRVFAGCLTEEGAESLRGETKSPRLR-TLQLDVTKPESVKEAAQWVKKH 101 (322)
T ss_pred CCcEEEEecCCcHHHHHHHHHHH-----hcCCEEEEEeecCchHHHHhhhhcCCcce-eEeeccCCHHHHHHHHHHHHHh
Confidence 35789999999999999999999 7999988755443321 11267888 999999999998887653321
Q ss_pred ----ccceEEeecccCC----------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCcccc
Q 028258 82 ----EITNLFWVPLQVQ----------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLA 147 (211)
Q Consensus 82 ----~~~~v~~~a~~~~----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~ 147 (211)
....+||+||... .++....++|..|+..+..++....+ ..-.|++.+||..
T Consensus 102 l~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr--~arGRvVnvsS~~------------ 167 (322)
T KOG1610|consen 102 LGEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLR--RARGRVVNVSSVL------------ 167 (322)
T ss_pred cccccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHH--hccCeEEEecccc------------
Confidence 2667999998532 13445678998876665555443321 0125778887632
Q ss_pred CCCCCCCCCCcCCCCCCCCCCcchhHHHHHhh-----cCCCceEEEecCC
Q 028258 148 GQLMPYEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSS 192 (211)
Q Consensus 148 g~~~~~~~~~~e~~~~~~~~~~~~~~e~~l~~-----~~~~~~~~i~Rp~ 192 (211)
| ..+.+--- +...+.++.|.+... +..|+++.++-||
T Consensus 168 G-----R~~~p~~g---~Y~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG 209 (322)
T KOG1610|consen 168 G-----RVALPALG---PYCVSKFAVEAFSDSLRRELRPFGVKVSIIEPG 209 (322)
T ss_pred c-----CccCcccc---cchhhHHHHHHHHHHHHHHHHhcCcEEEEeccC
Confidence 1 00000000 112334554443222 5679999999999
|
|
| >KOG4288 consensus Predicted oxidoreductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.66 E-value=3.3e-08 Score=77.96 Aligned_cols=149 Identities=15% Similarity=0.094 Sum_probs=99.8
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCC--CCCCceeEEEeeCCCHHHHHHHHHhcccccceEE
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF--PTALVDRYITFDALDPTDTALKLSLISQEITNLF 87 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~--~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~ 87 (211)
...++.|+.||.|+++|+... ..++.|-.+.|+..+..+ ....+. |+.+|.....-+...+.+ +..++
T Consensus 53 e~tlvlggnpfsgs~vlk~A~-----~vv~svgilsen~~k~~l~sw~~~vs-wh~gnsfssn~~k~~l~g----~t~v~ 122 (283)
T KOG4288|consen 53 EWTLVLGGNPFSGSEVLKNAT-----NVVHSVGILSENENKQTLSSWPTYVS-WHRGNSFSSNPNKLKLSG----PTFVY 122 (283)
T ss_pred HHHhhhcCCCcchHHHHHHHH-----hhceeeeEeecccCcchhhCCCcccc-hhhccccccCcchhhhcC----CcccH
Confidence 567899999999999999999 799999999998654221 135667 788887765545555554 34454
Q ss_pred eecccCCchhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCCCCCCCC
Q 028258 88 WVPLQVQESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFP 167 (211)
Q Consensus 88 ~~a~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~~~~~~~ 167 (211)
-+++... +...+.++|.....+.++++.+. ++++|+|+|.. .|+-+ |. .|
T Consensus 123 e~~ggfg-n~~~m~~ing~ani~a~kaa~~~-----gv~~fvyISa~-d~~~~---------------~~--------i~ 172 (283)
T KOG4288|consen 123 EMMGGFG-NIILMDRINGTANINAVKAAAKA-----GVPRFVYISAH-DFGLP---------------PL--------IP 172 (283)
T ss_pred HHhcCcc-chHHHHHhccHhhHHHHHHHHHc-----CCceEEEEEhh-hcCCC---------------Cc--------cc
Confidence 4554332 34456678888777888888776 78999999762 23211 10 11
Q ss_pred Ccch----hHHHHHhhcCCCceEEEecCCceEecCC
Q 028258 168 NFYY----ELEDVSASYSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 168 ~~~~----~~e~~l~~~~~~~~~~i~Rp~~i~G~~~ 199 (211)
.-|+ ..|..+.. ...+.-+++|||.|||...
T Consensus 173 rGY~~gKR~AE~Ell~-~~~~rgiilRPGFiyg~R~ 207 (283)
T KOG4288|consen 173 RGYIEGKREAEAELLK-KFRFRGIILRPGFIYGTRN 207 (283)
T ss_pred hhhhccchHHHHHHHH-hcCCCceeeccceeecccc
Confidence 2222 33444443 3457889999999999855
|
|
| >KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.65 E-value=4.3e-08 Score=80.60 Aligned_cols=116 Identities=16% Similarity=0.030 Sum_probs=78.4
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC------C--CCCCceeEEEeeCCCHHH----HHHHH
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW------F--PTALVDRYITFDALDPTD----TALKL 76 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~------~--~~~~~~~~i~~Dl~d~~~----~~~~~ 76 (211)
++=+.|||||.+||++.+++|+ ++|++|+.++|++++.. . ..-.++ ++.+|+++++. +.+.+
T Consensus 49 g~WAVVTGaTDGIGKayA~eLA-----krG~nvvLIsRt~~KL~~v~kEI~~~~~vev~-~i~~Dft~~~~~ye~i~~~l 122 (312)
T KOG1014|consen 49 GSWAVVTGATDGIGKAYARELA-----KRGFNVVLISRTQEKLEAVAKEIEEKYKVEVR-IIAIDFTKGDEVYEKLLEKL 122 (312)
T ss_pred CCEEEEECCCCcchHHHHHHHH-----HcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEE-EEEEecCCCchhHHHHHHHh
Confidence 4568999999999999999999 79999999999987631 1 123466 88999998865 44445
Q ss_pred HhcccccceEEeecccCCchhH-----------HHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeec
Q 028258 77 SLISQEITNLFWVPLQVQESEE-----------VNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTG 133 (211)
Q Consensus 77 ~~~~~~~~~v~~~a~~~~~~~~-----------~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~ 133 (211)
.+++ +.++|++++.....+. +...+|..++..+.+.+...|-.. +-..++.++|
T Consensus 123 ~~~~--VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r-~~G~IvnigS 187 (312)
T KOG1014|consen 123 AGLD--VGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVER-KKGIIVNIGS 187 (312)
T ss_pred cCCc--eEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcC-CCceEEEecc
Confidence 5554 7889999988653221 234667776655555554433000 2234555554
|
|
| >PLN00106 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=98.60 E-value=6.2e-07 Score=75.52 Aligned_cols=112 Identities=10% Similarity=-0.044 Sum_probs=78.7
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC---CCCCCCceeEEEeeCCCHHHHHHHHHhcccccce
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG---WFPTALVDRYITFDALDPTDTALKLSLISQEITN 85 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~---~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~ 85 (211)
+++|.|+||+|.||+.++..|... ....++..+++++... .+.+.... ....++.+.+++.+.+++ .|+
T Consensus 18 ~~KV~IiGaaG~VG~~~a~~l~~~---~~~~el~L~Di~~~~g~a~Dl~~~~~~-~~i~~~~~~~d~~~~l~~----aDi 89 (323)
T PLN00106 18 GFKVAVLGAAGGIGQPLSLLMKMN---PLVSELHLYDIANTPGVAADVSHINTP-AQVRGFLGDDQLGDALKG----ADL 89 (323)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhC---CCCCEEEEEecCCCCeeEchhhhCCcC-ceEEEEeCCCCHHHHcCC----CCE
Confidence 568999999999999999999831 2234788898876321 11122223 334455444456666776 688
Q ss_pred EEeecccCC---chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeec
Q 028258 86 LFWVPLQVQ---ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTG 133 (211)
Q Consensus 86 v~~~a~~~~---~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~ 133 (211)
|+++|+... .++.+....|...++++++.+.++ +...+++.+|
T Consensus 90 VVitAG~~~~~g~~R~dll~~N~~i~~~i~~~i~~~-----~p~aivivvS 135 (323)
T PLN00106 90 VIIPAGVPRKPGMTRDDLFNINAGIVKTLCEAVAKH-----CPNALVNIIS 135 (323)
T ss_pred EEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-----CCCeEEEEeC
Confidence 999998754 357778899999999999999988 4566666655
|
|
| >PRK09620 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.54 E-value=3e-07 Score=73.81 Aligned_cols=79 Identities=10% Similarity=-0.127 Sum_probs=52.9
Q ss_pred CCCeEEEEcCC----------------ChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCC---CCCCceeEEEeeCCC
Q 028258 8 PKSVALIIGVT----------------GISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF---PTALVDRYITFDALD 68 (211)
Q Consensus 8 ~~~~ilVtGat----------------G~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~---~~~~~~~~i~~Dl~d 68 (211)
.+|+||||+|. ||+|++|+++|+ ..|++|+++++.....+. ....+. .+..|...
T Consensus 2 ~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~-----~~Ga~V~li~g~~~~~~~~~~~~~~~~-~V~s~~d~ 75 (229)
T PRK09620 2 KGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELI-----SKGAHVIYLHGYFAEKPNDINNQLELH-PFEGIIDL 75 (229)
T ss_pred CCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHH-----HCCCeEEEEeCCCcCCCcccCCceeEE-EEecHHHH
Confidence 46899999875 999999999999 799999988864321111 112233 34443333
Q ss_pred HHHHHHHHHhcccccceEEeecccCC
Q 028258 69 PTDTALKLSLISQEITNLFWVPLQVQ 94 (211)
Q Consensus 69 ~~~~~~~~~~~~~~~~~v~~~a~~~~ 94 (211)
.+.+.+.+...+ +|.|||+|+...
T Consensus 76 ~~~l~~~~~~~~--~D~VIH~AAvsD 99 (229)
T PRK09620 76 QDKMKSIITHEK--VDAVIMAAAGSD 99 (229)
T ss_pred HHHHHHHhcccC--CCEEEECccccc
Confidence 345666665333 799999998854
|
|
| >PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B | Back alignment and domain information |
|---|
Probab=98.51 E-value=2.8e-07 Score=74.14 Aligned_cols=110 Identities=12% Similarity=-0.079 Sum_probs=77.5
Q ss_pred cCC--ChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC----C--CCCCCceeEEEeeCCCHHHHHHHHHhcc----ccc
Q 028258 16 GVT--GISGLSLAEALKNPTTPGSPWKVYGAARRPPPG----W--FPTALVDRYITFDALDPTDTALKLSLIS----QEI 83 (211)
Q Consensus 16 Gat--G~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~----~--~~~~~~~~~i~~Dl~d~~~~~~~~~~~~----~~~ 83 (211)
|++ +.||++++++|+ ++|++|++++|+..+. . ......+ ++.+|++|++++...++.+. ..+
T Consensus 1 g~~~s~GiG~aia~~l~-----~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~-~~~~D~~~~~~v~~~~~~~~~~~~g~i 74 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALA-----EEGANVILTDRNEEKLADALEELAKEYGAE-VIQCDLSDEESVEALFDEAVERFGGRI 74 (241)
T ss_dssp STSSTSHHHHHHHHHHH-----HTTEEEEEEESSHHHHHHHHHHHHHHTTSE-EEESCTTSHHHHHHHHHHHHHHHCSSE
T ss_pred CCCCCCChHHHHHHHHH-----HCCCEEEEEeCChHHHHHHHHHHHHHcCCc-eEeecCcchHHHHHHHHHHHhhcCCCe
Confidence 667 999999999999 7999999999987641 0 1123466 89999999988777765421 138
Q ss_pred ceEEeecccCCc-------------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 84 TNLFWVPLQVQE-------------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 84 ~~v~~~a~~~~~-------------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
|++||+++.... .+...+++|+.++..+.+++.+.+ .+-..++++|+.
T Consensus 75 D~lV~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~gsii~iss~ 135 (241)
T PF13561_consen 75 DILVNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLM---KKGGSIINISSI 135 (241)
T ss_dssp SEEEEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHH---HHEEEEEEEEEG
T ss_pred EEEEecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHH---hhCCCcccccch
Confidence 999999866332 234567888888877777775542 122566777653
|
... |
| >KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.44 E-value=1.9e-07 Score=70.87 Aligned_cols=100 Identities=16% Similarity=-0.008 Sum_probs=76.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC---CCCCC-ceeEEEeeCCCHHHHHHHHHhccccc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW---FPTAL-VDRYITFDALDPTDTALKLSLISQEI 83 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~---~~~~~-~~~~i~~Dl~d~~~~~~~~~~~~~~~ 83 (211)
.++.+++|||.-+||+.++..|. +.|.+|++++|++.... ...+. ++ .+.+|+.+-+.+.+.+..+.. +
T Consensus 6 aG~~vlvTgagaGIG~~~v~~La-----~aGA~ViAvaR~~a~L~sLV~e~p~~I~-Pi~~Dls~wea~~~~l~~v~p-i 78 (245)
T KOG1207|consen 6 AGVIVLVTGAGAGIGKEIVLSLA-----KAGAQVIAVARNEANLLSLVKETPSLII-PIVGDLSAWEALFKLLVPVFP-I 78 (245)
T ss_pred cceEEEeecccccccHHHHHHHH-----hcCCEEEEEecCHHHHHHHHhhCCccee-eeEecccHHHHHHHhhcccCc-h
Confidence 46899999999999999999999 69999999999876421 12343 77 999999998888888877654 7
Q ss_pred ceEEeecccCC---------chhHHHHhhcHHHHHHHHHH
Q 028258 84 TNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSV 114 (211)
Q Consensus 84 ~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~ 114 (211)
|.+++.|+... .+.+..+++|+.+..++.+.
T Consensus 79 dgLVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~ 118 (245)
T KOG1207|consen 79 DGLVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQL 118 (245)
T ss_pred hhhhccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHH
Confidence 88888876532 12334568888776665554
|
|
| >COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.38 E-value=2e-06 Score=73.70 Aligned_cols=73 Identities=19% Similarity=0.103 Sum_probs=59.1
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC----CCCCCceeEEEeeCCCHHHHHHHHHhcccccce
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW----FPTALVDRYITFDALDPTDTALKLSLISQEITN 85 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~----~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~ 85 (211)
++|||+|| |+||+.++..|++ ...++|++.+|++++.. ...++++ .+.+|+.|.+++.+++++ .|.
T Consensus 2 ~~ilviGa-G~Vg~~va~~la~----~~d~~V~iAdRs~~~~~~i~~~~~~~v~-~~~vD~~d~~al~~li~~----~d~ 71 (389)
T COG1748 2 MKILVIGA-GGVGSVVAHKLAQ----NGDGEVTIADRSKEKCARIAELIGGKVE-ALQVDAADVDALVALIKD----FDL 71 (389)
T ss_pred CcEEEECC-chhHHHHHHHHHh----CCCceEEEEeCCHHHHHHHHhhccccce-eEEecccChHHHHHHHhc----CCE
Confidence 67999997 9999999999995 33389999999876421 1235899 999999999999999998 467
Q ss_pred EEeeccc
Q 028258 86 LFWVPLQ 92 (211)
Q Consensus 86 v~~~a~~ 92 (211)
||+++-.
T Consensus 72 VIn~~p~ 78 (389)
T COG1748 72 VINAAPP 78 (389)
T ss_pred EEEeCCc
Confidence 8888744
|
|
| >KOG2774 consensus NAD dependent epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.34 E-value=8.9e-07 Score=70.39 Aligned_cols=115 Identities=22% Similarity=0.215 Sum_probs=78.2
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcE-EEEEeC-CCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccceE
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWK-VYGAAR-RPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITNL 86 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~-V~~~~R-~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v 86 (211)
..+|||||+-|.+|..++..|.. .-|-+ |+.-+- +++... ...-- +|..|+.|...+++.+-+.. +|-+
T Consensus 44 ~PrvLITG~LGQLG~~~A~LLR~----~yGs~~VILSDI~KPp~~V--~~~GP-yIy~DILD~K~L~eIVVn~R--IdWL 114 (366)
T KOG2774|consen 44 APRVLITGSLGQLGRGLASLLRY----MYGSECVILSDIVKPPANV--TDVGP-YIYLDILDQKSLEEIVVNKR--IDWL 114 (366)
T ss_pred CCeEEEecchHHHhHHHHHHHHH----HhCCccEehhhccCCchhh--cccCC-chhhhhhccccHHHhhcccc--ccee
Confidence 46899999999999999999974 34544 554433 333221 12334 78899999988888876543 7888
Q ss_pred EeecccCCc-hhH---HHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeee
Q 028258 87 FWVPLQVQE-SEE---VNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYM 138 (211)
Q Consensus 87 ~~~a~~~~~-~~~---~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~ 138 (211)
||..+.-+. .+. -..++|+.|..|+++.+.++ +++-| .-|+...||
T Consensus 115 ~HfSALLSAvGE~NVpLA~~VNI~GvHNil~vAa~~-----kL~iF-VPSTIGAFG 164 (366)
T KOG2774|consen 115 VHFSALLSAVGETNVPLALQVNIRGVHNILQVAAKH-----KLKVF-VPSTIGAFG 164 (366)
T ss_pred eeHHHHHHHhcccCCceeeeecchhhhHHHHHHHHc-----CeeEe-ecccccccC
Confidence 888655322 221 23588999999999999887 56643 334555554
|
|
| >PRK06732 phosphopantothenate--cysteine ligase; Validated | Back alignment and domain information |
|---|
Probab=98.33 E-value=2.7e-06 Score=68.40 Aligned_cols=68 Identities=15% Similarity=0.077 Sum_probs=46.3
Q ss_pred CCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCH--HHHHHHHHhcccccceEEeecccCC
Q 028258 17 VTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDP--TDTALKLSLISQEITNLFWVPLQVQ 94 (211)
Q Consensus 17 atG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~--~~~~~~~~~~~~~~~~v~~~a~~~~ 94 (211)
+|||+|++|+++|+ ++||+|+++.|+.........+++ ++.++..+. +.+.+.++ . +|+|||+|+...
T Consensus 24 SSG~iG~aLA~~L~-----~~G~~V~li~r~~~~~~~~~~~v~-~i~v~s~~~m~~~l~~~~~---~-~DivIh~AAvsd 93 (229)
T PRK06732 24 STGQLGKIIAETFL-----AAGHEVTLVTTKTAVKPEPHPNLS-IIEIENVDDLLETLEPLVK---D-HDVLIHSMAVSD 93 (229)
T ss_pred cchHHHHHHHHHHH-----hCCCEEEEEECcccccCCCCCCeE-EEEEecHHHHHHHHHHHhc---C-CCEEEeCCccCC
Confidence 68999999999999 699999999876432211234677 776544322 22333333 2 789999998764
|
|
| >PRK05086 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.33 E-value=7.8e-06 Score=68.71 Aligned_cols=110 Identities=13% Similarity=0.023 Sum_probs=71.4
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC----CCCC-CCceeEEEeeCCCHHHHHHHHHhcccccc
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG----WFPT-ALVDRYITFDALDPTDTALKLSLISQEIT 84 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~----~~~~-~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~ 84 (211)
++++|+||||.||++++..|... ...++++.+++|++... ...+ +... .+.+ .+.+++.+.+++ .|
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~--~~~~~el~L~d~~~~~~g~alDl~~~~~~~-~i~~--~~~~d~~~~l~~----~D 71 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQ--LPAGSELSLYDIAPVTPGVAVDLSHIPTAV-KIKG--FSGEDPTPALEG----AD 71 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcC--CCCccEEEEEecCCCCcceehhhhcCCCCc-eEEE--eCCCCHHHHcCC----CC
Confidence 47999999999999999988521 03456788888864421 1112 1122 2332 112233344554 68
Q ss_pred eEEeecccCCc---hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeec
Q 028258 85 NLFWVPLQVQE---SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTG 133 (211)
Q Consensus 85 ~v~~~a~~~~~---~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~ 133 (211)
.||.+++.... +..+....|...+.++++.+.++ +.++++.+.+
T Consensus 72 iVIitaG~~~~~~~~R~dll~~N~~i~~~ii~~i~~~-----~~~~ivivvs 118 (312)
T PRK05086 72 VVLISAGVARKPGMDRSDLFNVNAGIVKNLVEKVAKT-----CPKACIGIIT 118 (312)
T ss_pred EEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-----CCCeEEEEcc
Confidence 88889887442 35567888999999999999987 4566666554
|
|
| >TIGR00715 precor6x_red precorrin-6x reductase | Back alignment and domain information |
|---|
Probab=98.30 E-value=1e-05 Score=66.02 Aligned_cols=73 Identities=19% Similarity=0.136 Sum_probs=56.1
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-CCCCCceeEEEeeCCCHHHHHHHHHhcccccceEEee
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-FPTALVDRYITFDALDPTDTALKLSLISQEITNLFWV 89 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~~~ 89 (211)
+|||+||||. |+.|+++|. +.||+|++..|...... ....+.. .+..+..|.+++.+.+.+.+ ++.|+++
T Consensus 2 ~ILvlGGT~e-gr~la~~L~-----~~g~~v~~s~~t~~~~~~~~~~g~~-~v~~g~l~~~~l~~~l~~~~--i~~VIDA 72 (256)
T TIGR00715 2 TVLLMGGTVD-SRAIAKGLI-----AQGIEILVTVTTSEGKHLYPIHQAL-TVHTGALDPQELREFLKRHS--IDILVDA 72 (256)
T ss_pred eEEEEechHH-HHHHHHHHH-----hCCCeEEEEEccCCccccccccCCc-eEEECCCCHHHHHHHHHhcC--CCEEEEc
Confidence 6999999999 999999999 68999999999876432 1223344 55677778888888887765 7888887
Q ss_pred ccc
Q 028258 90 PLQ 92 (211)
Q Consensus 90 a~~ 92 (211)
+..
T Consensus 73 tHP 75 (256)
T TIGR00715 73 THP 75 (256)
T ss_pred CCH
Confidence 643
|
This enzyme was found to be a monomer by gel filtration. |
| >PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated | Back alignment and domain information |
|---|
Probab=98.21 E-value=8.4e-06 Score=70.62 Aligned_cols=78 Identities=13% Similarity=-0.027 Sum_probs=59.2
Q ss_pred CCCCeEEEEcC----------------CChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHH
Q 028258 7 NPKSVALIIGV----------------TGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPT 70 (211)
Q Consensus 7 ~~~~~ilVtGa----------------tG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~ 70 (211)
+.+|++||||| ||.+|.+++++|. ..|++|++++++..... .. . ...+|+++.+
T Consensus 186 l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~-----~~Ga~V~~v~~~~~~~~--~~--~-~~~~dv~~~~ 255 (399)
T PRK05579 186 LAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAA-----RRGADVTLVSGPVNLPT--PA--G-VKRIDVESAQ 255 (399)
T ss_pred cCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHH-----HCCCEEEEeCCCccccC--CC--C-cEEEccCCHH
Confidence 45789999999 8999999999999 79999999988653211 12 2 3467999988
Q ss_pred HHHHHHHhcccccceEEeecccCC
Q 028258 71 DTALKLSLISQEITNLFWVPLQVQ 94 (211)
Q Consensus 71 ~~~~~~~~~~~~~~~v~~~a~~~~ 94 (211)
++.+++...-..+|++|++|+...
T Consensus 256 ~~~~~v~~~~~~~DilI~~Aav~d 279 (399)
T PRK05579 256 EMLDAVLAALPQADIFIMAAAVAD 279 (399)
T ss_pred HHHHHHHHhcCCCCEEEEcccccc
Confidence 877777543223899999998643
|
|
| >KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.19 E-value=1e-05 Score=65.01 Aligned_cols=85 Identities=19% Similarity=0.199 Sum_probs=58.5
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC---------CCC--CCCceeEEEeeCCCHHHHHHH
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG---------WFP--TALVDRYITFDALDPTDTALK 75 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~---------~~~--~~~~~~~i~~Dl~d~~~~~~~ 75 (211)
||.|.+||||+++.+|-+||.+|++-.....-..+....|+.++. ... .-.++ ++..|+++..++..+
T Consensus 1 ~~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~-yvlvD~sNm~Sv~~A 79 (341)
T KOG1478|consen 1 MMRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVT-YVLVDVSNMQSVFRA 79 (341)
T ss_pred CCceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEE-EEEEehhhHHHHHHH
Confidence 577999999999999999999999511101113355566765542 111 34678 899999999888777
Q ss_pred HHhccc---ccceEEeeccc
Q 028258 76 LSLISQ---EITNLFWVPLQ 92 (211)
Q Consensus 76 ~~~~~~---~~~~v~~~a~~ 92 (211)
.+++.. .+|.|+-.|+.
T Consensus 80 ~~di~~rf~~ld~iylNAg~ 99 (341)
T KOG1478|consen 80 SKDIKQRFQRLDYIYLNAGI 99 (341)
T ss_pred HHHHHHHhhhccEEEEcccc
Confidence 766543 37787766654
|
|
| >cd00704 MDH Malate dehydrogenase | Back alignment and domain information |
|---|
Probab=98.18 E-value=3.2e-05 Score=65.28 Aligned_cols=98 Identities=17% Similarity=0.123 Sum_probs=67.7
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCC--CCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCH-----------HHHHHHHH
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPG--SPWKVYGAARRPPPGWFPTALVDRYITFDALDP-----------TDTALKLS 77 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~--~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~-----------~~~~~~~~ 77 (211)
+|.|+||+|.||+.++..|+..+--. ..+++..+++++.. +..+ ....|+.|. ....+.++
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~-----~~~~-g~~~Dl~d~~~~~~~~~~i~~~~~~~~~ 75 (323)
T cd00704 2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAM-----KALE-GVVMELQDCAFPLLKGVVITTDPEEAFK 75 (323)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCcc-----Cccc-eeeeehhhhcccccCCcEEecChHHHhC
Confidence 68999999999999999988411101 23468888887621 1233 445555554 22334455
Q ss_pred hcccccceEEeecccCCc---hhHHHHhhcHHHHHHHHHHHHhc
Q 028258 78 LISQEITNLFWVPLQVQE---SEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 78 ~~~~~~~~v~~~a~~~~~---~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
+ .|.|+++|+.+.. +..+....|...++.+...+.+.
T Consensus 76 ~----aDiVVitAG~~~~~g~tR~dll~~N~~i~~~i~~~i~~~ 115 (323)
T cd00704 76 D----VDVAILVGAFPRKPGMERADLLRKNAKIFKEQGEALNKV 115 (323)
T ss_pred C----CCEEEEeCCCCCCcCCcHHHHHHHhHHHHHHHHHHHHHh
Confidence 4 6889999988542 45567788999999999999887
|
Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase | Back alignment and domain information |
|---|
Probab=98.16 E-value=1.1e-05 Score=69.59 Aligned_cols=72 Identities=24% Similarity=0.269 Sum_probs=54.2
Q ss_pred EEEEcCCChHHHHHHHHhhCCCCCCCCc-EEEEEeCCCCCCC-----CCCCCceeEEEeeCCCHHHHHHHHHhcccccce
Q 028258 12 ALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRPPPGW-----FPTALVDRYITFDALDPTDTALKLSLISQEITN 85 (211)
Q Consensus 12 ilVtGatG~iG~~l~~~L~~~~~~~~g~-~V~~~~R~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~ 85 (211)
|+|.|| |++|+.+++.|++ ...+ +|++.+|+..+.. ....+++ ++.+|+.|.+++.+.+++ .|.
T Consensus 1 IlvlG~-G~vG~~~~~~L~~----~~~~~~v~va~r~~~~~~~~~~~~~~~~~~-~~~~d~~~~~~l~~~~~~----~dv 70 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLAR----RGPFEEVTVADRNPEKAERLAEKLLGDRVE-AVQVDVNDPESLAELLRG----CDV 70 (386)
T ss_dssp EEEE---SHHHHHHHHHHHC----TTCE-EEEEEESSHHHHHHHHT--TTTTEE-EEE--TTTHHHHHHHHTT----SSE
T ss_pred CEEEcC-cHHHHHHHHHHhc----CCCCCcEEEEECCHHHHHHHHhhcccccee-EEEEecCCHHHHHHHHhc----CCE
Confidence 789999 9999999999995 4456 8999999876421 1357889 999999999999999887 478
Q ss_pred EEeecccC
Q 028258 86 LFWVPLQV 93 (211)
Q Consensus 86 v~~~a~~~ 93 (211)
|++|++..
T Consensus 71 Vin~~gp~ 78 (386)
T PF03435_consen 71 VINCAGPF 78 (386)
T ss_dssp EEE-SSGG
T ss_pred EEECCccc
Confidence 99998765
|
Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A. |
| >TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=98.10 E-value=5e-05 Score=64.16 Aligned_cols=98 Identities=15% Similarity=0.167 Sum_probs=67.7
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCC--CCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHH-----------HHHHHHH
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPG--SPWKVYGAARRPPPGWFPTALVDRYITFDALDPT-----------DTALKLS 77 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~--~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~-----------~~~~~~~ 77 (211)
+|.|+||+|.||++++..|...+--. +.++++.+++++... ..+ -...|+.|.. ...+.++
T Consensus 1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~-----~a~-g~~~Dl~d~~~~~~~~~~~~~~~~~~~~ 74 (324)
T TIGR01758 1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK-----VLE-GVVMELMDCAFPLLDGVVPTHDPAVAFT 74 (324)
T ss_pred CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc-----ccc-eeEeehhcccchhcCceeccCChHHHhC
Confidence 58999999999999999998311101 334688898865531 123 4455666554 1223344
Q ss_pred hcccccceEEeecccCCc---hhHHHHhhcHHHHHHHHHHHHhc
Q 028258 78 LISQEITNLFWVPLQVQE---SEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 78 ~~~~~~~~v~~~a~~~~~---~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
+ .|.|+++|+.... ++.+....|+..++.+.+.+.++
T Consensus 75 ~----aDiVVitAG~~~~~~~tr~~ll~~N~~i~k~i~~~i~~~ 114 (324)
T TIGR01758 75 D----VDVAILVGAFPRKEGMERRDLLSKNVKIFKEQGRALDKL 114 (324)
T ss_pred C----CCEEEEcCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhh
Confidence 3 6889999988543 46677899999999999999887
|
This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography |
| >KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.08 E-value=3.8e-06 Score=63.83 Aligned_cols=106 Identities=18% Similarity=-0.013 Sum_probs=80.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC----CCCCCceeEEEeeCCCHHHHHHHHHhccc--
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW----FPTALVDRYITFDALDPTDTALKLSLISQ-- 81 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~----~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~-- 81 (211)
++-..||||+.+.+|++.+++|. .+|..|..++-..++.. ....++- +...|++.+.++..++...+.
T Consensus 8 kglvalvtggasglg~ataerla-----kqgasv~lldlp~skg~~vakelg~~~v-f~padvtsekdv~aala~ak~kf 81 (260)
T KOG1199|consen 8 KGLVALVTGGASGLGKATAERLA-----KQGASVALLDLPQSKGADVAKELGGKVV-FTPADVTSEKDVRAALAKAKAKF 81 (260)
T ss_pred cCeeEEeecCcccccHHHHHHHH-----hcCceEEEEeCCcccchHHHHHhCCceE-EeccccCcHHHHHHHHHHHHhhc
Confidence 45679999999999999999999 69999999887555421 1246677 889999999988888866543
Q ss_pred -ccceEEeecccCCc---------------hhHHHHhhcHHHHHHHHHHHHhcC
Q 028258 82 -EITNLFWVPLQVQE---------------SEEVNIFKNSTMLKNVLSVLVSSN 119 (211)
Q Consensus 82 -~~~~v~~~a~~~~~---------------~~~~~~~~n~~~~~~l~~~~~~~~ 119 (211)
..|..++||+.... +....+++|+.|+.|+++.....|
T Consensus 82 grld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglm 135 (260)
T KOG1199|consen 82 GRLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLM 135 (260)
T ss_pred cceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhh
Confidence 48899999976321 233456889999999887665554
|
|
| >PRK13656 trans-2-enoyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.08 E-value=1.8e-05 Score=67.84 Aligned_cols=79 Identities=22% Similarity=0.280 Sum_probs=57.9
Q ss_pred CCCeEEEEcCCChHHHH--HHHHhhCCCCCCCCcEEEEEeCCCC--C------CC---------CC--CCCceeEEEeeC
Q 028258 8 PKSVALIIGVTGISGLS--LAEALKNPTTPGSPWKVYGAARRPP--P------GW---------FP--TALVDRYITFDA 66 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~--l~~~L~~~~~~~~g~~V~~~~R~~~--~------~~---------~~--~~~~~~~i~~Dl 66 (211)
-+|++|||||++.+|.+ +++.| + .|++|+++++... . .| .. ...+. .+.+|+
T Consensus 40 ggK~aLVTGaSsGIGlA~~IA~al-~-----~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~-~i~~DV 112 (398)
T PRK13656 40 GPKKVLVIGASSGYGLASRIAAAF-G-----AGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAK-SINGDA 112 (398)
T ss_pred CCCEEEEECCCchHhHHHHHHHHH-H-----cCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceE-EEEcCC
Confidence 36899999999999999 89999 5 7888888875321 1 01 01 12355 789999
Q ss_pred CCHHHHHHHHHhccc---ccceEEeecccC
Q 028258 67 LDPTDTALKLSLISQ---EITNLFWVPLQV 93 (211)
Q Consensus 67 ~d~~~~~~~~~~~~~---~~~~v~~~a~~~ 93 (211)
++++.+.+.++.+.. .+|.++|+++..
T Consensus 113 ss~E~v~~lie~I~e~~G~IDiLVnSaA~~ 142 (398)
T PRK13656 113 FSDEIKQKVIELIKQDLGQVDLVVYSLASP 142 (398)
T ss_pred CCHHHHHHHHHHHHHhcCCCCEEEECCccC
Confidence 999888777665532 389999998765
|
|
| >KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.08 E-value=1.7e-05 Score=62.73 Aligned_cols=125 Identities=10% Similarity=-0.052 Sum_probs=72.6
Q ss_pred ccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcE--EEEEeCCCCCCC-C---CCCCceeEEEeeCCCHHHHHH---
Q 028258 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWK--VYGAARRPPPGW-F---PTALVDRYITFDALDPTDTAL--- 74 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~--V~~~~R~~~~~~-~---~~~~~~~~i~~Dl~d~~~~~~--- 74 (211)
|.-+|.+.+||||||..||..++..+. +.+-+ +.+..|...... + ...... ...+|+++...+..
T Consensus 1 m~~~~r~villTGaSrgiG~~~v~~i~-----aed~e~~r~g~~r~~a~~~~L~v~~gd~~v-~~~g~~~e~~~l~al~e 74 (253)
T KOG1204|consen 1 MDLNMRKVILLTGASRGIGTGSVATIL-----AEDDEALRYGVARLLAELEGLKVAYGDDFV-HVVGDITEEQLLGALRE 74 (253)
T ss_pred CCcccceEEEEecCCCCccHHHHHHHH-----hcchHHHHHhhhcccccccceEEEecCCcc-eechHHHHHHHHHHHHh
Confidence 566788999999999999999999888 34444 444444333210 0 011222 34455555432222
Q ss_pred HHHhcccccceEEeecccCC------------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 75 KLSLISQEITNLFWVPLQVQ------------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 75 ~~~~~~~~~~~v~~~a~~~~------------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
+.+.-...-+.|||.||... ..|..+|+.|+.+...|...+.......|-.+.++++||.
T Consensus 75 ~~r~k~gkr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~ 146 (253)
T KOG1204|consen 75 APRKKGGKRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSL 146 (253)
T ss_pred hhhhcCCceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecch
Confidence 22211112678999998632 1477789999887766666444332112223667777763
|
|
| >KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.07 E-value=1.1e-05 Score=63.92 Aligned_cols=164 Identities=13% Similarity=0.089 Sum_probs=91.5
Q ss_pred CCCeEEEEcCCChHHHHHHH-----HhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHH-HHHHHHHhccc
Q 028258 8 PKSVALIIGVTGISGLSLAE-----ALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPT-DTALKLSLISQ 81 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~-----~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~-~~~~~~~~~~~ 81 (211)
|.+++++-+.+|+|+..|.. ++-+-.+ ++.|+|++++|.+.+. ++. |-+.|..-.- ++....
T Consensus 11 ~sr~a~~~~~~g~i~~nl~~~~~~~H~t~~~~-a~~h~vtv~sR~pg~~-----rit-w~el~~~Gip~sc~a~v----- 78 (315)
T KOG3019|consen 11 KSRDAVSNWSNGIIRENLGSETSCCHDTNVHS-ADNHAVTVLSRSPGKA-----RIT-WPELDFPGIPISCVAGV----- 78 (315)
T ss_pred ccccCCCCccccchhccccCcccccccCCCCc-ccccceEEEecCCCCc-----ccc-cchhcCCCCceehHHHH-----
Confidence 45778889999999988877 4442222 3458999999988753 222 3222222110 111111
Q ss_pred ccceEEeecccCCchhHHHHhhcH-----HHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCC
Q 028258 82 EITNLFWVPLQVQESEEVNIFKNS-----TMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVP 156 (211)
Q Consensus 82 ~~~~v~~~a~~~~~~~~~~~~~n~-----~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~ 156 (211)
..+...+...-..|...++.|+ ..+..|.+++..+ -..-+.++.+|+..+|-.+. ...
T Consensus 79 --na~g~n~l~P~rRWsp~fqkev~gSRi~~t~~la~aI~~a---Pq~~~~~Vlv~gva~y~pS~------------s~e 141 (315)
T KOG3019|consen 79 --NAVGNNALLPIRRWSPEFQKEVKGSRIRVTSKLADAINNA---PQEARPTVLVSGVAVYVPSE------------SQE 141 (315)
T ss_pred --hhhhhhccCchhhcCHHHHHHhhcceeeHHHHHHHHHhcC---CCCCCCeEEEEeeEEecccc------------ccc
Confidence 1111122222223333333322 3456788888875 22345788999999996432 234
Q ss_pred CcCCCCCCCCCCcch-----hHHHHHhhcCCCceEEEecCCceEecCCCCC
Q 028258 157 FKEDSSRLPFPNFYY-----ELEDVSASYSPAITYSVHRSSVIIGASPRSL 202 (211)
Q Consensus 157 ~~e~~~~~~~~~~~~-----~~e~~l~~~~~~~~~~i~Rp~~i~G~~~~~~ 202 (211)
++|+.+... ..|. ..|..........+.+++|.+.|+|.+.+..
T Consensus 142 Y~e~~~~qg--fd~~srL~l~WE~aA~~~~~~~r~~~iR~GvVlG~gGGa~ 190 (315)
T KOG3019|consen 142 YSEKIVHQG--FDILSRLCLEWEGAALKANKDVRVALIRIGVVLGKGGGAL 190 (315)
T ss_pred cccccccCC--hHHHHHHHHHHHHHhhccCcceeEEEEEEeEEEecCCcch
Confidence 667665321 1111 2222222135668999999999999986654
|
|
| >cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase | Back alignment and domain information |
|---|
Probab=98.04 E-value=1.5e-05 Score=62.33 Aligned_cols=74 Identities=16% Similarity=0.049 Sum_probs=55.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----C-CCCCceeEEEeeCCCHHHHHHHHHhccc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----F-PTALVDRYITFDALDPTDTALKLSLISQ 81 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----~-~~~~~~~~i~~Dl~d~~~~~~~~~~~~~ 81 (211)
..++++|+||+|.+|+.+++.|. ..|++|++++|+..+.. . ...+.+ ...+|..+.+++.+.+++
T Consensus 27 ~~~~vlVlGgtG~iG~~~a~~l~-----~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~--- 97 (194)
T cd01078 27 KGKTAVVLGGTGPVGQRAAVLLA-----REGARVVLVGRDLERAQKAADSLRARFGEG-VGAVETSDDAARAAAIKG--- 97 (194)
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-----HCCCEEEEEcCCHHHHHHHHHHHHhhcCCc-EEEeeCCCHHHHHHHHhc---
Confidence 45789999999999999999999 57889999999765321 0 112456 667899998888888876
Q ss_pred ccceEEeecc
Q 028258 82 EITNLFWVPL 91 (211)
Q Consensus 82 ~~~~v~~~a~ 91 (211)
.|.||++..
T Consensus 98 -~diVi~at~ 106 (194)
T cd01078 98 -ADVVFAAGA 106 (194)
T ss_pred -CCEEEECCC
Confidence 466766543
|
Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo |
| >PRK14982 acyl-ACP reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.85 E-value=1.4e-05 Score=67.75 Aligned_cols=73 Identities=16% Similarity=0.103 Sum_probs=48.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCC-cEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccceE
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSP-WKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITNL 86 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g-~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v 86 (211)
.+|+|+||||+|+||+.++++|.+ ..+ .+++.+.|+..+... -..+ +...|+. .+.+.+.+ +|.|
T Consensus 154 ~~k~VLVtGAtG~IGs~lar~L~~----~~gv~~lilv~R~~~rl~~--La~e-l~~~~i~---~l~~~l~~----aDiV 219 (340)
T PRK14982 154 SKATVAVVGATGDIGSAVCRWLDA----KTGVAELLLVARQQERLQE--LQAE-LGGGKIL---SLEEALPE----ADIV 219 (340)
T ss_pred CCCEEEEEccChHHHHHHHHHHHh----hCCCCEEEEEcCCHHHHHH--HHHH-hccccHH---hHHHHHcc----CCEE
Confidence 468999999999999999999983 234 578888887543210 0112 2223433 34455554 6889
Q ss_pred EeecccCC
Q 028258 87 FWVPLQVQ 94 (211)
Q Consensus 87 ~~~a~~~~ 94 (211)
+|+++...
T Consensus 220 v~~ts~~~ 227 (340)
T PRK14982 220 VWVASMPK 227 (340)
T ss_pred EECCcCCc
Confidence 99987644
|
|
| >TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal | Back alignment and domain information |
|---|
Probab=97.72 E-value=7.9e-05 Score=59.85 Aligned_cols=67 Identities=15% Similarity=0.016 Sum_probs=46.9
Q ss_pred CCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcc---cccceEEeecccC
Q 028258 17 VTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLIS---QEITNLFWVPLQV 93 (211)
Q Consensus 17 atG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~---~~~~~v~~~a~~~ 93 (211)
+||+||++++++|+ ++|++|++++|..... + .. ...+|+.+.+.+.+.++.+. ..+|++||+|+..
T Consensus 23 SSGgIG~AIA~~la-----~~Ga~Vvlv~~~~~l~----~-~~-~~~~Dv~d~~s~~~l~~~v~~~~g~iDiLVnnAgv~ 91 (227)
T TIGR02114 23 STGHLGKIITETFL-----SAGHEVTLVTTKRALK----P-EP-HPNLSIREIETTKDLLITLKELVQEHDILIHSMAVS 91 (227)
T ss_pred cccHHHHHHHHHHH-----HCCCEEEEEcChhhcc----c-cc-CCcceeecHHHHHHHHHHHHHHcCCCCEEEECCEec
Confidence 58999999999999 7999999887632211 1 11 23578888877666554331 1389999999864
Q ss_pred C
Q 028258 94 Q 94 (211)
Q Consensus 94 ~ 94 (211)
.
T Consensus 92 d 92 (227)
T TIGR02114 92 D 92 (227)
T ss_pred c
Confidence 3
|
In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity. |
| >TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.00026 Score=61.22 Aligned_cols=78 Identities=14% Similarity=0.032 Sum_probs=56.8
Q ss_pred CCCCeEEEEcC----------------CChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHH
Q 028258 7 NPKSVALIIGV----------------TGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPT 70 (211)
Q Consensus 7 ~~~~~ilVtGa----------------tG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~ 70 (211)
..+|++||||| ||.+|.+++++|. ..|++|+.+.++..... .. . ...+|+.+.+
T Consensus 183 ~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~-----~~Ga~V~~~~g~~~~~~--~~--~-~~~~~v~~~~ 252 (390)
T TIGR00521 183 LEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAY-----KRGADVTLITGPVSLLT--PP--G-VKSIKVSTAE 252 (390)
T ss_pred cCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHH-----HCCCEEEEeCCCCccCC--CC--C-cEEEEeccHH
Confidence 45789999998 4679999999999 79999999887654221 12 2 4468999988
Q ss_pred HH-HHHHHhcccccceEEeecccCC
Q 028258 71 DT-ALKLSLISQEITNLFWVPLQVQ 94 (211)
Q Consensus 71 ~~-~~~~~~~~~~~~~v~~~a~~~~ 94 (211)
++ +..++.....+|.+|++|+...
T Consensus 253 ~~~~~~~~~~~~~~D~~i~~Aavsd 277 (390)
T TIGR00521 253 EMLEAALNELAKDFDIFISAAAVAD 277 (390)
T ss_pred HHHHHHHHhhcccCCEEEEcccccc
Confidence 77 5555333223799999998753
|
This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity. |
| >PRK12548 shikimate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.00018 Score=59.81 Aligned_cols=74 Identities=11% Similarity=-0.034 Sum_probs=53.2
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcE-EEEEeCCC---CCCC-----C--CCCCceeEEEeeCCCHHHHHHH
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWK-VYGAARRP---PPGW-----F--PTALVDRYITFDALDPTDTALK 75 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~-V~~~~R~~---~~~~-----~--~~~~~~~~i~~Dl~d~~~~~~~ 75 (211)
.++|+++|+|| |++|++++..|. ..|++ |++++|+. .+.. + ....+. ...+|+.+.+++.+.
T Consensus 124 ~~~k~vlI~GA-GGagrAia~~La-----~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~-~~~~d~~~~~~~~~~ 196 (289)
T PRK12548 124 VKGKKLTVIGA-GGAATAIQVQCA-----LDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECI-VNVYDLNDTEKLKAE 196 (289)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHH-----HCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCce-eEEechhhhhHHHhh
Confidence 34689999998 899999999999 67886 99999986 2210 0 113345 567888887777666
Q ss_pred HHhcccccceEEeecc
Q 028258 76 LSLISQEITNLFWVPL 91 (211)
Q Consensus 76 ~~~~~~~~~~v~~~a~ 91 (211)
++. .|.||++.-
T Consensus 197 ~~~----~DilINaTp 208 (289)
T PRK12548 197 IAS----SDILVNATL 208 (289)
T ss_pred hcc----CCEEEEeCC
Confidence 654 578888763
|
|
| >PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.00021 Score=61.71 Aligned_cols=39 Identities=15% Similarity=0.307 Sum_probs=32.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
++++|.|.||||++|+.|++.|.+ ...++|..+.++...
T Consensus 37 ~~~kVaIvGATG~vG~eLlrlL~~----hP~~el~~l~s~~sa 75 (381)
T PLN02968 37 EKKRIFVLGASGYTGAEVRRLLAN----HPDFEITVMTADRKA 75 (381)
T ss_pred cccEEEEECCCChHHHHHHHHHHh----CCCCeEEEEEChhhc
Confidence 567899999999999999999995 457889998876543
|
|
| >KOG2733 consensus Uncharacterized membrane protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.00017 Score=60.64 Aligned_cols=78 Identities=10% Similarity=-0.020 Sum_probs=57.4
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----------CCCCCceeEEEeeCCCHHHHHHHHH
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----------FPTALVDRYITFDALDPTDTALKLS 77 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----------~~~~~~~~~i~~Dl~d~~~~~~~~~ 77 (211)
.-.+.|.|||||.|..+++++++... -++..+-+..|++.+.. ...+..- .+.+|.+|++++.+..+
T Consensus 5 ~yDvVIyGASGfTG~yivee~v~~~~-~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~-i~i~D~~n~~Sl~emak 82 (423)
T KOG2733|consen 5 RYDVVIYGASGFTGKYIVEEAVSSQV-FEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSV-ILIADSANEASLDEMAK 82 (423)
T ss_pred eeeEEEEccccccceeeHHHHhhhhc-ccCceEEEecCCHHHHHHHHHHHhhccCCCcccce-EEEecCCCHHHHHHHHh
Confidence 45799999999999999999983111 25666777778766421 0113444 77899999999999988
Q ss_pred hcccccceEEeeccc
Q 028258 78 LISQEITNLFWVPLQ 92 (211)
Q Consensus 78 ~~~~~~~~v~~~a~~ 92 (211)
+. .+|+||++.
T Consensus 83 ~~----~vivN~vGP 93 (423)
T KOG2733|consen 83 QA----RVIVNCVGP 93 (423)
T ss_pred hh----EEEEecccc
Confidence 74 578888876
|
|
| >cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.0019 Score=54.61 Aligned_cols=95 Identities=11% Similarity=0.014 Sum_probs=62.5
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCc-------EEEEEeCCCCCCCCCCCCceeEEEeeCCCH-----------H
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPW-------KVYGAARRPPPGWFPTALVDRYITFDALDP-----------T 70 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~-------~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~-----------~ 70 (211)
.++|.|+||+|.||+.++..|+. .+. ++..++..+.... .+ -...|+.+- .
T Consensus 2 p~KV~IiGa~G~VG~~~a~~l~~-----~~~~~~~~~~el~L~Di~~~~~~-----a~-g~a~Dl~~~~~~~~~~~~i~~ 70 (322)
T cd01338 2 PVRVAVTGAAGQIGYSLLFRIAS-----GEMFGPDQPVILQLLELPQALKA-----LE-GVAMELEDCAFPLLAEIVITD 70 (322)
T ss_pred CeEEEEECCCcHHHHHHHHHHHh-----ccccCCCCceEEEEEecCCcccc-----cc-eeehhhhhccccccCceEEec
Confidence 46899999999999999999983 443 6888888543210 00 111111110 0
Q ss_pred HHHHHHHhcccccceEEeecccCC---chhHHHHhhcHHHHHHHHHHHHhc
Q 028258 71 DTALKLSLISQEITNLFWVPLQVQ---ESEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 71 ~~~~~~~~~~~~~~~v~~~a~~~~---~~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
...+.+++ .|+||.+|+... .+..+....|....+.+.+.+.++
T Consensus 71 ~~~~~~~d----aDivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~ 117 (322)
T cd01338 71 DPNVAFKD----ADWALLVGAKPRGPGMERADLLKANGKIFTAQGKALNDV 117 (322)
T ss_pred CcHHHhCC----CCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhh
Confidence 11233444 578888888744 245567889999999999999987
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK05442 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.0026 Score=53.81 Aligned_cols=100 Identities=12% Similarity=0.048 Sum_probs=61.5
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCC--CCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHH-----------HHHHH
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTP--GSPWKVYGAARRPPPGWFPTALVDRYITFDALDPT-----------DTALK 75 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~--~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~-----------~~~~~ 75 (211)
+++|.|+||+|.+|+.++..|+..+-- ..-.++..+++++.... .+ -...|+.|.. ...+.
T Consensus 4 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~-----~~-g~a~Dl~~~~~~~~~~~~i~~~~y~~ 77 (326)
T PRK05442 4 PVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKA-----LE-GVVMELDDCAFPLLAGVVITDDPNVA 77 (326)
T ss_pred CcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccc-----cc-eeehhhhhhhhhhcCCcEEecChHHH
Confidence 457999999999999999988731000 01126888887543210 01 1111222111 11233
Q ss_pred HHhcccccceEEeecccCC---chhHHHHhhcHHHHHHHHHHHHhc
Q 028258 76 LSLISQEITNLFWVPLQVQ---ESEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 76 ~~~~~~~~~~v~~~a~~~~---~~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
+++ .|.|+.+|+... .+..+....|....+.+.+.+.++
T Consensus 78 ~~d----aDiVVitaG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~ 119 (326)
T PRK05442 78 FKD----ADVALLVGARPRGPGMERKDLLEANGAIFTAQGKALNEV 119 (326)
T ss_pred hCC----CCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence 444 577888888643 255667889999999999999886
|
|
| >TIGR01759 MalateDH-SF1 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.0021 Score=54.32 Aligned_cols=97 Identities=14% Similarity=0.045 Sum_probs=61.9
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCc-------EEEEEeCCCCC--CC-----CCCCCceeEEE-eeCCCHHHHHH
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPW-------KVYGAARRPPP--GW-----FPTALVDRYIT-FDALDPTDTAL 74 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~-------~V~~~~R~~~~--~~-----~~~~~~~~~i~-~Dl~d~~~~~~ 74 (211)
-+|.|+||+|.+|++++..|+. .+. ++..+++.+.. .. +.+.... ... ..+. ....+
T Consensus 4 ~KV~IIGa~G~VG~~~a~~l~~-----~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~-~~~~~~i~--~~~~~ 75 (323)
T TIGR01759 4 VRVAVTGAAGQIGYSLLFRIAS-----GELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFP-LLAGVVAT--TDPEE 75 (323)
T ss_pred eEEEEECCCcHHHHHHHHHHHh-----CCcccCCCccEEEEEecCCcccccchHHHHHhhcccc-ccCCcEEe--cChHH
Confidence 4799999999999999999983 442 78888885422 11 0111000 000 0011 11123
Q ss_pred HHHhcccccceEEeecccCC---chhHHHHhhcHHHHHHHHHHHHhc
Q 028258 75 KLSLISQEITNLFWVPLQVQ---ESEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 75 ~~~~~~~~~~~v~~~a~~~~---~~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
.+++ .|+|+.+|+... .+..+....|....+.+.+.+.+.
T Consensus 76 ~~~d----aDvVVitAG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~ 118 (323)
T TIGR01759 76 AFKD----VDAALLVGAFPRKPGMERADLLSKNGKIFKEQGKALNKV 118 (323)
T ss_pred HhCC----CCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhh
Confidence 3444 578888988753 355667889999999999999987
|
This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms. |
| >cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.0018 Score=54.47 Aligned_cols=95 Identities=16% Similarity=0.035 Sum_probs=60.8
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCc--EEEEEeCCC--CCCC-----CCCC----CceeEEEeeCCCHHHHHHHH
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPW--KVYGAARRP--PPGW-----FPTA----LVDRYITFDALDPTDTALKL 76 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~--~V~~~~R~~--~~~~-----~~~~----~~~~~i~~Dl~d~~~~~~~~ 76 (211)
++|.|+||||.+|..++..|+ ..|. +|++++|.+ ++.. ..+. ... .....++ +.+ .+
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~-----~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~--~~i~~~~--d~~-~l 70 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLA-----KEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGID--AEIKISS--DLS-DV 70 (309)
T ss_pred CEEEEECCCChHHHHHHHHHH-----hCCCCCEEEEEECcccccccccccchhhhchhccCCC--cEEEECC--CHH-Hh
Confidence 468999999999999999999 4554 499999954 2210 0010 001 0111111 122 25
Q ss_pred HhcccccceEEeecccCCc---hhHHHHhhcHHHHHHHHHHHHhc
Q 028258 77 SLISQEITNLFWVPLQVQE---SEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 77 ~~~~~~~~~v~~~a~~~~~---~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
++ .|.||.+++.+.. +..+..+.|...++.+++.+.+.
T Consensus 71 ~~----aDiViitag~p~~~~~~r~dl~~~n~~i~~~~~~~i~~~ 111 (309)
T cd05294 71 AG----SDIVIITAGVPRKEGMSRLDLAKKNAKIVKKYAKQIAEF 111 (309)
T ss_pred CC----CCEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 54 5788888876442 33556788999999999988887
|
The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox |
| >COG0623 FabI Enoyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.0056 Score=48.86 Aligned_cols=107 Identities=8% Similarity=-0.051 Sum_probs=71.5
Q ss_pred CCCCeEEEEc--CCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC---C-CC--CCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 7 NPKSVALIIG--VTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP---G-WF--PTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 7 ~~~~~ilVtG--atG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~---~-~~--~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
+.+|++||+| -..-|+..|++.|. ++|.++...-..+.- . ++ .....- +++||+++.+++...++.
T Consensus 4 L~GK~~lI~Gvan~rSIAwGIAk~l~-----~~GAeL~fTy~~e~l~krv~~la~~~~s~~-v~~cDV~~d~~i~~~f~~ 77 (259)
T COG0623 4 LEGKRILIMGVANNRSIAWGIAKALA-----EQGAELAFTYQGERLEKRVEELAEELGSDL-VLPCDVTNDESIDALFAT 77 (259)
T ss_pred cCCceEEEEEecccccHHHHHHHHHH-----HcCCEEEEEeccHHHHHHHHHHHhhccCCe-EEecCCCCHHHHHHHHHH
Confidence 4579999999 45679999999999 799987765543321 0 00 112334 689999999999888877
Q ss_pred ccc---ccceEEeecccCCch-------------hHHHHhhcHHHHHHHHHHHHhcC
Q 028258 79 ISQ---EITNLFWVPLQVQES-------------EEVNIFKNSTMLKNVLSVLVSSN 119 (211)
Q Consensus 79 ~~~---~~~~v~~~a~~~~~~-------------~~~~~~~n~~~~~~l~~~~~~~~ 119 (211)
+.. .+|.++|+.+....+ ....+++...++..+.++++..|
T Consensus 78 i~~~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM 134 (259)
T COG0623 78 IKKKWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLM 134 (259)
T ss_pred HHHhhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhc
Confidence 654 388999998764421 11223444555556666666654
|
|
| >PRK00066 ldh L-lactate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.0012 Score=55.63 Aligned_cols=92 Identities=15% Similarity=0.047 Sum_probs=62.6
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCc--EEEEEeCCCCCCC-----CCC-----CCceeEEEeeCCCHHHHHHHH
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPW--KVYGAARRPPPGW-----FPT-----ALVDRYITFDALDPTDTALKL 76 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~--~V~~~~R~~~~~~-----~~~-----~~~~~~i~~Dl~d~~~~~~~~ 76 (211)
+++|.|+|| |.+|++++..|+ ..+. ++..++++..... +.+ ..+. . .. .+. +.+
T Consensus 6 ~~ki~iiGa-G~vG~~~a~~l~-----~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~-i-~~--~~~----~~~ 71 (315)
T PRK00066 6 HNKVVLVGD-GAVGSSYAYALV-----NQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTK-I-YA--GDY----SDC 71 (315)
T ss_pred CCEEEEECC-CHHHHHHHHHHH-----hcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeE-E-Ee--CCH----HHh
Confidence 568999998 999999999998 4555 6889998765421 111 1222 2 21 222 224
Q ss_pred HhcccccceEEeecccCC---chhHHHHhhcHHHHHHHHHHHHhc
Q 028258 77 SLISQEITNLFWVPLQVQ---ESEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 77 ~~~~~~~~~v~~~a~~~~---~~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
++ .|.|+.+++.+. .+..+....|....+.+++.+.+.
T Consensus 72 ~~----adivIitag~~~k~g~~R~dll~~N~~i~~~i~~~i~~~ 112 (315)
T PRK00066 72 KD----ADLVVITAGAPQKPGETRLDLVEKNLKIFKSIVGEVMAS 112 (315)
T ss_pred CC----CCEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 54 578888888743 245567788999999999988887
|
|
| >PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis [] | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.0016 Score=48.30 Aligned_cols=95 Identities=17% Similarity=0.028 Sum_probs=63.0
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----CC----CCCceeEEEeeCCCHHHHHHHHHhccc
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----FP----TALVDRYITFDALDPTDTALKLSLISQ 81 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----~~----~~~~~~~i~~Dl~d~~~~~~~~~~~~~ 81 (211)
+|.|+||+|.+|++++..|+.. .-..++..+++++.... +. .......+.. .+.++ +++
T Consensus 2 KV~IiGa~G~VG~~~a~~l~~~---~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~--~~~~~----~~~--- 69 (141)
T PF00056_consen 2 KVAIIGAAGNVGSTLALLLAQQ---GLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS--GDYEA----LKD--- 69 (141)
T ss_dssp EEEEESTTSHHHHHHHHHHHHT---TTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE--SSGGG----GTT---
T ss_pred EEEEECCCChHHHHHHHHHHhC---CCCCceEEeccCcccceeeehhhhhhhhhccccccccc--ccccc----ccc---
Confidence 6899999999999999999841 33467999998854310 00 0111101122 22222 343
Q ss_pred ccceEEeecccCC---chhHHHHhhcHHHHHHHHHHHHhc
Q 028258 82 EITNLFWVPLQVQ---ESEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 82 ~~~~v~~~a~~~~---~~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
.|.|+.+++... .+..+....|....+.+.+.+.+.
T Consensus 70 -aDivvitag~~~~~g~sR~~ll~~N~~i~~~~~~~i~~~ 108 (141)
T PF00056_consen 70 -ADIVVITAGVPRKPGMSRLDLLEANAKIVKEIAKKIAKY 108 (141)
T ss_dssp -ESEEEETTSTSSSTTSSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -ccEEEEeccccccccccHHHHHHHhHhHHHHHHHHHHHh
Confidence 578888887753 245567788999999999999988
|
L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C .... |
| >PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.001 Score=58.56 Aligned_cols=72 Identities=18% Similarity=0.079 Sum_probs=51.4
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC------CCCCCceeEEEeeCCCHHHHHHHHHhcc
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW------FPTALVDRYITFDALDPTDTALKLSLIS 80 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~ 80 (211)
+++|+++|+|+++ +|..+++.|+ +.|++|++++++..... ....+++ ++.+|..+. .+.+
T Consensus 3 ~~~k~v~iiG~g~-~G~~~A~~l~-----~~G~~V~~~d~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~-----~~~~-- 68 (450)
T PRK14106 3 LKGKKVLVVGAGV-SGLALAKFLK-----KLGAKVILTDEKEEDQLKEALEELGELGIE-LVLGEYPEE-----FLEG-- 68 (450)
T ss_pred cCCCEEEEECCCH-HHHHHHHHHH-----HCCCEEEEEeCCchHHHHHHHHHHHhcCCE-EEeCCcchh-----Hhhc--
Confidence 3468999999877 9999999999 79999999998753211 1123567 777787751 1222
Q ss_pred cccceEEeecccCC
Q 028258 81 QEITNLFWVPLQVQ 94 (211)
Q Consensus 81 ~~~~~v~~~a~~~~ 94 (211)
+|.||++++...
T Consensus 69 --~d~vv~~~g~~~ 80 (450)
T PRK14106 69 --VDLVVVSPGVPL 80 (450)
T ss_pred --CCEEEECCCCCC
Confidence 688888877543
|
|
| >PRK14874 aspartate-semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.0018 Score=55.06 Aligned_cols=35 Identities=20% Similarity=0.258 Sum_probs=28.1
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCc---EEEEEeCCCC
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPW---KVYGAARRPP 49 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~---~V~~~~R~~~ 49 (211)
++|+|.||||++|+.|++.|. +++| ++..+.|+..
T Consensus 2 ~~V~IvGAtG~vG~~l~~lL~-----~~~hp~~~l~~l~s~~~ 39 (334)
T PRK14874 2 YNVAVVGATGAVGREMLNILE-----ERNFPVDKLRLLASARS 39 (334)
T ss_pred CEEEEECCCCHHHHHHHHHHH-----hCCCCcceEEEEEcccc
Confidence 479999999999999999998 4554 4577777644
|
|
| >PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.0009 Score=48.24 Aligned_cols=34 Identities=21% Similarity=0.329 Sum_probs=27.5
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEE-EeCCC
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYG-AARRP 48 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~-~~R~~ 48 (211)
+|.|+||||++|+.|++.|.+ ...+++.. +.|+.
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~----hp~~e~~~~~~~~~ 35 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAE----HPDFELVALVSSSR 35 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHH----TSTEEEEEEEESTT
T ss_pred CEEEECCCCHHHHHHHHHHhc----CCCccEEEeeeecc
Confidence 589999999999999999996 56788555 45554
|
This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C .... |
| >cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.0084 Score=50.40 Aligned_cols=96 Identities=11% Similarity=0.060 Sum_probs=62.0
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCC--cEEEEEeCCCCCCC---CCCC--CceeEEEeeCCCHHHHHHHHHhccccc
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSP--WKVYGAARRPPPGW---FPTA--LVDRYITFDALDPTDTALKLSLISQEI 83 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g--~~V~~~~R~~~~~~---~~~~--~~~~~i~~Dl~d~~~~~~~~~~~~~~~ 83 (211)
+|.|+||+|.+|++++..|+ ..+ .++..++.+..... +.+. ... ..... .+ +++.+.+++ .
T Consensus 2 KI~IIGaaG~VG~~~a~~l~-----~~~~~~elvLiDi~~a~g~alDL~~~~~~~~-i~~~~-~~-~~~y~~~~d----a 69 (310)
T cd01337 2 KVAVLGAAGGIGQPLSLLLK-----LNPLVSELALYDIVNTPGVAADLSHINTPAK-VTGYL-GP-EELKKALKG----A 69 (310)
T ss_pred EEEEECCCCHHHHHHHHHHH-----hCCCCcEEEEEecCccceeehHhHhCCCcce-EEEec-CC-CchHHhcCC----C
Confidence 68999999999999999998 344 46888887621111 1111 111 11110 11 112334554 5
Q ss_pred ceEEeecccCC---chhHHHHhhcHHHHHHHHHHHHhc
Q 028258 84 TNLFWVPLQVQ---ESEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 84 ~~v~~~a~~~~---~~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
|.|+.+|+... .+..+....|...++.+.+.+.++
T Consensus 70 DivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~ 107 (310)
T cd01337 70 DVVVIPAGVPRKPGMTRDDLFNINAGIVRDLATAVAKA 107 (310)
T ss_pred CEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 78888888753 245667889999999999999887
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.0078 Score=50.64 Aligned_cols=96 Identities=14% Similarity=0.084 Sum_probs=61.7
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCC--cEEEEEeCCCCCCC---CCCC--CceeEEEeeCCCHHHHHHHHHhccccc
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSP--WKVYGAARRPPPGW---FPTA--LVDRYITFDALDPTDTALKLSLISQEI 83 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g--~~V~~~~R~~~~~~---~~~~--~~~~~i~~Dl~d~~~~~~~~~~~~~~~ 83 (211)
+|.|+||+|.||++++..|+. .+ -++.++++++.... +.+. ... ..... +.++..+.+++ .
T Consensus 1 KV~IiGaaG~VG~~~a~~l~~-----~~~~~elvL~Di~~a~g~a~DL~~~~~~~~-i~~~~--~~~~~~~~~~d----a 68 (312)
T TIGR01772 1 KVAVLGAAGGIGQPLSLLLKL-----QPYVSELSLYDIAGAAGVAADLSHIPTAAS-VKGFS--GEEGLENALKG----A 68 (312)
T ss_pred CEEEECCCCHHHHHHHHHHHh-----CCCCcEEEEecCCCCcEEEchhhcCCcCce-EEEec--CCCchHHHcCC----C
Confidence 578999999999999999983 44 36888888662211 1111 111 11101 11112334555 5
Q ss_pred ceEEeecccCC---chhHHHHhhcHHHHHHHHHHHHhc
Q 028258 84 TNLFWVPLQVQ---ESEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 84 ~~v~~~a~~~~---~~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
|+|+.+++... .+..+....|...++.+.+.+.+.
T Consensus 69 DivvitaG~~~~~g~~R~dll~~N~~I~~~i~~~i~~~ 106 (312)
T TIGR01772 69 DVVVIPAGVPRKPGMTRDDLFNVNAGIVKDLVAAVAES 106 (312)
T ss_pred CEEEEeCCCCCCCCccHHHHHHHhHHHHHHHHHHHHHh
Confidence 78888888743 245567788999999999999887
|
Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases. |
| >PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.0013 Score=55.98 Aligned_cols=34 Identities=24% Similarity=0.294 Sum_probs=28.9
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCC
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~ 47 (211)
++|+|+||||++|+.+++.|.+ ..+++++++.++
T Consensus 3 ~kVaIiGAtG~vG~~l~~~L~~----~p~~elv~v~~~ 36 (343)
T PRK00436 3 IKVGIVGASGYTGGELLRLLLN----HPEVEIVAVTSR 36 (343)
T ss_pred eEEEEECCCCHHHHHHHHHHHc----CCCceEEEEECc
Confidence 6899999999999999999995 567888776664
|
|
| >PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.0012 Score=56.50 Aligned_cols=38 Identities=26% Similarity=0.266 Sum_probs=30.3
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCC
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~ 48 (211)
||+.+|+|+||||++|+.+++.|.+ ....++.++.++.
T Consensus 1 ~~~~~V~I~GatG~iG~~l~~~L~~----~p~~el~~~~~s~ 38 (349)
T PRK08664 1 MMKLKVGILGATGMVGQRFVQLLAN----HPWFEVTALAASE 38 (349)
T ss_pred CCCcEEEEECCCCHHHHHHHHHHHc----CCCceEEEEEcCh
Confidence 3457899999999999999999984 4556888874543
|
|
| >cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.0071 Score=50.72 Aligned_cols=91 Identities=19% Similarity=0.074 Sum_probs=62.3
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCC--cEEEEEeCCCCCCCCC-----------CCCceeEEEeeCCCHHHHHHHH
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSP--WKVYGAARRPPPGWFP-----------TALVDRYITFDALDPTDTALKL 76 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g--~~V~~~~R~~~~~~~~-----------~~~~~~~i~~Dl~d~~~~~~~~ 76 (211)
++|.|+|+ |.+|+.++..|+ ..| ++|.+++|++...... ..... . . ..+.+ .+
T Consensus 1 ~kI~IIGa-G~vG~~~a~~l~-----~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~-i-~--~~~~~----~l 66 (306)
T cd05291 1 RKVVIIGA-GHVGSSFAYSLV-----NQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVK-I-K--AGDYS----DC 66 (306)
T ss_pred CEEEEECC-CHHHHHHHHHHH-----hcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeE-E-E--cCCHH----Hh
Confidence 36899995 999999999998 566 6899999977642100 01111 1 1 12222 23
Q ss_pred HhcccccceEEeecccCC---chhHHHHhhcHHHHHHHHHHHHhc
Q 028258 77 SLISQEITNLFWVPLQVQ---ESEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 77 ~~~~~~~~~v~~~a~~~~---~~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
++ .|.||++++... .+..+....|....+.+.+.+.++
T Consensus 67 ~~----aDIVIitag~~~~~g~~R~dll~~N~~i~~~~~~~i~~~ 107 (306)
T cd05291 67 KD----ADIVVITAGAPQKPGETRLDLLEKNAKIMKSIVPKIKAS 107 (306)
T ss_pred CC----CCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 33 688888888743 245567788999999999999987
|
L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine |
| >COG3268 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.00059 Score=57.05 Aligned_cols=78 Identities=17% Similarity=-0.021 Sum_probs=55.7
Q ss_pred ccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC----CCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW----FPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~----~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
|.+-+...++|-|||||.|.-++++|+ .+|.+-....|+..+.. ...++.. ..++.+++.+++.+.+
T Consensus 1 ~~~e~e~d~iiYGAtGy~G~lvae~l~-----~~g~~~aLAgRs~~kl~~l~~~LG~~~~---~~p~~~p~~~~~~~~~- 71 (382)
T COG3268 1 MPMEREYDIIIYGATGYAGGLVAEYLA-----REGLTAALAGRSSAKLDALRASLGPEAA---VFPLGVPAALEAMASR- 71 (382)
T ss_pred CCCCcceeEEEEccccchhHHHHHHHH-----HcCCchhhccCCHHHHHHHHHhcCcccc---ccCCCCHHHHHHHHhc-
Confidence 344456789999999999999999999 57766655667766531 1134444 4555558888888777
Q ss_pred ccccceEEeecccC
Q 028258 80 SQEITNLFWVPLQV 93 (211)
Q Consensus 80 ~~~~~~v~~~a~~~ 93 (211)
..+|++|++.-
T Consensus 72 ---~~VVlncvGPy 82 (382)
T COG3268 72 ---TQVVLNCVGPY 82 (382)
T ss_pred ---ceEEEeccccc
Confidence 56899999873
|
|
| >PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0063 Score=47.32 Aligned_cols=78 Identities=14% Similarity=0.009 Sum_probs=46.2
Q ss_pred CCCeEEEEc----------------CCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHH
Q 028258 8 PKSVALIIG----------------VTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTD 71 (211)
Q Consensus 8 ~~~~ilVtG----------------atG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~ 71 (211)
.+|+||||+ .||..|.+|++++. ..|++|+.+..... .. ...+++ .+ ++...++
T Consensus 2 ~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~-----~~Ga~V~li~g~~~-~~-~p~~~~-~i--~v~sa~e 71 (185)
T PF04127_consen 2 KGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAA-----RRGAEVTLIHGPSS-LP-PPPGVK-VI--RVESAEE 71 (185)
T ss_dssp TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHH-----HTT-EEEEEE-TTS------TTEE-EE--E-SSHHH
T ss_pred CCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHH-----HCCCEEEEEecCcc-cc-ccccce-EE--Eecchhh
Confidence 368889987 48999999999999 79999999887632 11 124556 44 4555555
Q ss_pred HHHHHHhcccccceEEeecccCCc
Q 028258 72 TALKLSLISQEITNLFWVPLQVQE 95 (211)
Q Consensus 72 ~~~~~~~~~~~~~~v~~~a~~~~~ 95 (211)
+.+++...-...|.+|++|+....
T Consensus 72 m~~~~~~~~~~~Di~I~aAAVsDf 95 (185)
T PF04127_consen 72 MLEAVKELLPSADIIIMAAAVSDF 95 (185)
T ss_dssp HHHHHHHHGGGGSEEEE-SB--SE
T ss_pred hhhhhccccCcceeEEEecchhhe
Confidence 555544332226899999987653
|
These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A. |
| >PRK08057 cobalt-precorrin-6x reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.027 Score=45.84 Aligned_cols=73 Identities=15% Similarity=-0.043 Sum_probs=54.4
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccceEEe
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITNLFW 88 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~~ 88 (211)
+++|||+|||+ =|+.|++.|. +.|+.|+...-..... .....+. ...+-+.|.+++.+.+++.+ ++.|+.
T Consensus 2 ~~~IlvlgGT~-egr~la~~L~-----~~g~~v~~Svat~~g~-~~~~~~~-v~~G~l~~~~~l~~~l~~~~--i~~VID 71 (248)
T PRK08057 2 MPRILLLGGTS-EARALARALA-----AAGVDIVLSLAGRTGG-PADLPGP-VRVGGFGGAEGLAAYLREEG--IDLVID 71 (248)
T ss_pred CceEEEEechH-HHHHHHHHHH-----hCCCeEEEEEccCCCC-cccCCce-EEECCCCCHHHHHHHHHHCC--CCEEEE
Confidence 46799999987 4999999998 6789988765544322 2345667 77888888899999998765 777776
Q ss_pred ecc
Q 028258 89 VPL 91 (211)
Q Consensus 89 ~a~ 91 (211)
.+.
T Consensus 72 ATH 74 (248)
T PRK08057 72 ATH 74 (248)
T ss_pred CCC
Confidence 543
|
|
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.0015 Score=57.36 Aligned_cols=69 Identities=20% Similarity=0.116 Sum_probs=51.4
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-CC-CCCceeEEEeeCCCHHHHHHH-HHhcccccceEE
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-FP-TALVDRYITFDALDPTDTALK-LSLISQEITNLF 87 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-~~-~~~~~~~i~~Dl~d~~~~~~~-~~~~~~~~~~v~ 87 (211)
+++|+|+ |.+|+++++.|. +.|++|++++|++.... .. ..+++ ++.+|.++.+.+.++ +++ ++.++
T Consensus 2 ~viIiG~-G~ig~~~a~~L~-----~~g~~v~vid~~~~~~~~~~~~~~~~-~~~gd~~~~~~l~~~~~~~----a~~vi 70 (453)
T PRK09496 2 KIIIVGA-GQVGYTLAENLS-----GENNDVTVIDTDEERLRRLQDRLDVR-TVVGNGSSPDVLREAGAED----ADLLI 70 (453)
T ss_pred EEEEECC-CHHHHHHHHHHH-----hCCCcEEEEECCHHHHHHHHhhcCEE-EEEeCCCCHHHHHHcCCCc----CCEEE
Confidence 6899996 999999999999 68999999999776421 11 24678 899999998776665 333 45555
Q ss_pred eec
Q 028258 88 WVP 90 (211)
Q Consensus 88 ~~a 90 (211)
.+.
T Consensus 71 ~~~ 73 (453)
T PRK09496 71 AVT 73 (453)
T ss_pred Eec
Confidence 443
|
|
| >PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.0038 Score=53.06 Aligned_cols=21 Identities=29% Similarity=0.453 Sum_probs=20.1
Q ss_pred CeEEEEcCCChHHHHHHHHhh
Q 028258 10 SVALIIGVTGISGLSLAEALK 30 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~ 30 (211)
.+|+|+||||++|+.+++.|.
T Consensus 5 ~~IaIvGATG~vG~eLlrlL~ 25 (336)
T PRK05671 5 LDIAVVGATGTVGEALVQILE 25 (336)
T ss_pred CEEEEEccCCHHHHHHHHHHh
Confidence 679999999999999999999
|
|
| >COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.012 Score=49.40 Aligned_cols=95 Identities=19% Similarity=0.033 Sum_probs=61.7
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----CCCC-----CceeEEEeeCCCHHHHHHHHHhc
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----FPTA-----LVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----~~~~-----~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
++|.|+|| |+||+.++..|+.. .-+-++..++....... +.+. .-. .+.+| .+ .+.+++
T Consensus 1 ~KVaviGa-G~VG~s~a~~l~~~---~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~-~i~~~-~~----y~~~~~- 69 (313)
T COG0039 1 MKVAVIGA-GNVGSSLAFLLLLQ---GLGSELVLIDINEEKAEGVALDLSHAAAPLGSDV-KITGD-GD----YEDLKG- 69 (313)
T ss_pred CeEEEECC-ChHHHHHHHHHhcc---cccceEEEEEcccccccchhcchhhcchhccCce-EEecC-CC----hhhhcC-
Confidence 46899999 99999999999731 22346888888744321 1110 001 12222 11 122444
Q ss_pred ccccceEEeecccCCc---hhHHHHhhcHHHHHHHHHHHHhc
Q 028258 80 SQEITNLFWVPLQVQE---SEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 80 ~~~~~~v~~~a~~~~~---~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
.|.|+.+|+.+.. +..+....|...++.+.+.+.+.
T Consensus 70 ---aDiVvitAG~prKpGmtR~DLl~~Na~I~~~i~~~i~~~ 108 (313)
T COG0039 70 ---ADIVVITAGVPRKPGMTRLDLLEKNAKIVKDIAKAIAKY 108 (313)
T ss_pred ---CCEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhh
Confidence 5788888877542 55678899999999999999887
|
|
| >TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.0042 Score=52.86 Aligned_cols=34 Identities=21% Similarity=0.287 Sum_probs=25.8
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEE---EEEeCCCC
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKV---YGAARRPP 49 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V---~~~~R~~~ 49 (211)
+|+|.||||++|+.|++.|. +++|.+ ..+.++..
T Consensus 1 ~VaIvGAtG~vG~eLi~lL~-----~~~hp~~~l~~~as~~~ 37 (339)
T TIGR01296 1 NVAIVGATGAVGQEMLKILE-----ERNFPIDKLVLLASDRS 37 (339)
T ss_pred CEEEEcCCCHHHHHHHHHHH-----hCCCChhhEEEEecccc
Confidence 47999999999999999998 556663 34445543
|
Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978. |
| >PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ] | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.011 Score=42.88 Aligned_cols=34 Identities=26% Similarity=0.492 Sum_probs=28.6
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEE-EEeCCC
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVY-GAARRP 48 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~-~~~R~~ 48 (211)
+|.|.|++|.+|+.+++.+.+ ..++++. +++|++
T Consensus 2 rV~i~G~~GrMG~~i~~~i~~----~~~~~lv~~v~~~~ 36 (124)
T PF01113_consen 2 RVGIVGASGRMGRAIAEAILE----SPGFELVGAVDRKP 36 (124)
T ss_dssp EEEEETTTSHHHHHHHHHHHH----STTEEEEEEEETTT
T ss_pred EEEEECCCCHHHHHHHHHHHh----cCCcEEEEEEecCC
Confidence 689999999999999999995 5889955 566766
|
In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A .... |
| >COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.0031 Score=50.56 Aligned_cols=70 Identities=19% Similarity=0.041 Sum_probs=52.9
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCC---CCCCceeEEEeeCCCHHHHHHH-HHhcccccce
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF---PTALVDRYITFDALDPTDTALK-LSLISQEITN 85 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~---~~~~~~~~i~~Dl~d~~~~~~~-~~~~~~~~~~ 85 (211)
++++|.| .|-+|+++++.|. +.|++|+++++++..... .....+ .+.+|-+|++.+.++ +.. .|+
T Consensus 1 m~iiIiG-~G~vG~~va~~L~-----~~g~~Vv~Id~d~~~~~~~~~~~~~~~-~v~gd~t~~~~L~~agi~~----aD~ 69 (225)
T COG0569 1 MKIIIIG-AGRVGRSVARELS-----EEGHNVVLIDRDEERVEEFLADELDTH-VVIGDATDEDVLEEAGIDD----ADA 69 (225)
T ss_pred CEEEEEC-CcHHHHHHHHHHH-----hCCCceEEEEcCHHHHHHHhhhhcceE-EEEecCCCHHHHHhcCCCc----CCE
Confidence 3577777 8999999999999 799999999998765221 135667 899999999887775 333 566
Q ss_pred EEeec
Q 028258 86 LFWVP 90 (211)
Q Consensus 86 v~~~a 90 (211)
++-+.
T Consensus 70 vva~t 74 (225)
T COG0569 70 VVAAT 74 (225)
T ss_pred EEEee
Confidence 65444
|
|
| >PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.0091 Score=42.24 Aligned_cols=69 Identities=28% Similarity=0.228 Sum_probs=48.5
Q ss_pred EEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-CCCCCceeEEEeeCCCHHHHHHHHHhcccccceEEeec
Q 028258 12 ALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-FPTALVDRYITFDALDPTDTALKLSLISQEITNLFWVP 90 (211)
Q Consensus 12 ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~~~a 90 (211)
++|.| .|-+|+.+++.|. +.+++|+++++++.... ....+++ ++.+|.+|++.+.++ ++.. .+.++.+.
T Consensus 1 vvI~G-~g~~~~~i~~~L~-----~~~~~vvvid~d~~~~~~~~~~~~~-~i~gd~~~~~~l~~a--~i~~-a~~vv~~~ 70 (116)
T PF02254_consen 1 VVIIG-YGRIGREIAEQLK-----EGGIDVVVIDRDPERVEELREEGVE-VIYGDATDPEVLERA--GIEK-ADAVVILT 70 (116)
T ss_dssp EEEES--SHHHHHHHHHHH-----HTTSEEEEEESSHHHHHHHHHTTSE-EEES-TTSHHHHHHT--TGGC-ESEEEEES
T ss_pred eEEEc-CCHHHHHHHHHHH-----hCCCEEEEEECCcHHHHHHHhcccc-cccccchhhhHHhhc--Cccc-cCEEEEcc
Confidence 57888 5789999999999 66679999999875421 1235588 999999999887665 2222 55665444
|
The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A .... |
| >KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.027 Score=46.33 Aligned_cols=111 Identities=10% Similarity=0.021 Sum_probs=70.3
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcE-EEEEeCCCCCC---CCCCCCceeEEEeeCCCHHHHHHHHHhcccccc
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWK-VYGAARRPPPG---WFPTALVDRYITFDALDPTDTALKLSLISQEIT 84 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~-V~~~~R~~~~~---~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~ 84 (211)
..+|.|.||.|+||+-|...|.. ..... ....+-+..+. .+.+-+-. ......+-++.+++++++. |
T Consensus 28 ~~KVAvlGAaGGIGQPLSLLlK~----np~Vs~LaLYDi~~~~GVaaDlSHI~T~-s~V~g~~g~~~L~~al~~a----d 98 (345)
T KOG1494|consen 28 GLKVAVLGAAGGIGQPLSLLLKL----NPLVSELALYDIANTPGVAADLSHINTN-SSVVGFTGADGLENALKGA----D 98 (345)
T ss_pred cceEEEEecCCccCccHHHHHhc----CcccceeeeeecccCCcccccccccCCC-CceeccCChhHHHHHhcCC----C
Confidence 46899999999999999888763 12211 22223222211 11121112 2234555566888888884 6
Q ss_pred eEEeecccCCc---hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEee
Q 028258 85 NLFWVPLQVQE---SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLT 132 (211)
Q Consensus 85 ~v~~~a~~~~~---~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s 132 (211)
.|+.-|+.+.. ..++.+.+|....+.|..++.+. +++- .+.++|
T Consensus 99 vVvIPAGVPRKPGMTRDDLFn~NAgIv~~l~~aia~~---cP~A-~i~vIs 145 (345)
T KOG1494|consen 99 VVVIPAGVPRKPGMTRDDLFNINAGIVKTLAAAIAKC---CPNA-LILVIS 145 (345)
T ss_pred EEEecCCCCCCCCCcHHHhhhcchHHHHHHHHHHHhh---Cccc-eeEeec
Confidence 77778877542 67788999999999999999887 6532 334444
|
|
| >PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.0038 Score=60.10 Aligned_cols=72 Identities=17% Similarity=0.049 Sum_probs=52.1
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcE-------------EEEEeCCCCCCC---CCCCCceeEEEeeCCCHHHH
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWK-------------VYGAARRPPPGW---FPTALVDRYITFDALDPTDT 72 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~-------------V~~~~R~~~~~~---~~~~~~~~~i~~Dl~d~~~~ 72 (211)
+|+|+|+|| |+||+.+++.|.+ ..+++ |.+.++++.... ...++++ .+..|+.|.+++
T Consensus 569 ~~rIlVLGA-G~VG~~~a~~La~----~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~~~~-~v~lDv~D~e~L 642 (1042)
T PLN02819 569 SQNVLILGA-GRVCRPAAEYLAS----VKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIENAE-AVQLDVSDSESL 642 (1042)
T ss_pred CCcEEEECC-CHHHHHHHHHHHh----CcCccccccccccccccEEEEECCCHHHHHHHHHhcCCCc-eEEeecCCHHHH
Confidence 578999995 9999999999985 23333 777777654321 1124678 899999999888
Q ss_pred HHHHHhcccccceEEeec
Q 028258 73 ALKLSLISQEITNLFWVP 90 (211)
Q Consensus 73 ~~~~~~~~~~~~~v~~~a 90 (211)
.+.+++ +|.|+.|.
T Consensus 643 ~~~v~~----~DaVIsal 656 (1042)
T PLN02819 643 LKYVSQ----VDVVISLL 656 (1042)
T ss_pred HHhhcC----CCEEEECC
Confidence 887776 56777664
|
|
| >PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.00029 Score=51.92 Aligned_cols=73 Identities=18% Similarity=0.039 Sum_probs=47.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcE-EEEEeCCCCCCCC---CCCCceeEEEeeCCCHHHHHHHHHhccccc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWK-VYGAARRPPPGWF---PTALVDRYITFDALDPTDTALKLSLISQEI 83 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~-V~~~~R~~~~~~~---~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~ 83 (211)
..++++|.|| |..|+.++..|. ..|.+ |+++.|+..+... ..++.. +-..++.+ +.+.+.. .
T Consensus 11 ~~~~vlviGa-Gg~ar~v~~~L~-----~~g~~~i~i~nRt~~ra~~l~~~~~~~~-~~~~~~~~---~~~~~~~----~ 76 (135)
T PF01488_consen 11 KGKRVLVIGA-GGAARAVAAALA-----ALGAKEITIVNRTPERAEALAEEFGGVN-IEAIPLED---LEEALQE----A 76 (135)
T ss_dssp TTSEEEEESS-SHHHHHHHHHHH-----HTTSSEEEEEESSHHHHHHHHHHHTGCS-EEEEEGGG---HCHHHHT----E
T ss_pred CCCEEEEECC-HHHHHHHHHHHH-----HcCCCEEEEEECCHHHHHHHHHHcCccc-cceeeHHH---HHHHHhh----C
Confidence 4689999995 999999999999 57777 9999998664210 012222 33445544 3344554 6
Q ss_pred ceEEeecccCC
Q 028258 84 TNLFWVPLQVQ 94 (211)
Q Consensus 84 ~~v~~~a~~~~ 94 (211)
|.||++.....
T Consensus 77 DivI~aT~~~~ 87 (135)
T PF01488_consen 77 DIVINATPSGM 87 (135)
T ss_dssp SEEEE-SSTTS
T ss_pred CeEEEecCCCC
Confidence 78888876543
|
Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C .... |
| >PLN00112 malate dehydrogenase (NADP); Provisional | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.02 Score=50.42 Aligned_cols=99 Identities=11% Similarity=0.027 Sum_probs=61.9
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCC--CCCc--EEEEEeCCCCCCC-----CCCCC---ceeEEEeeCCCHHHHHHHHH
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTP--GSPW--KVYGAARRPPPGW-----FPTAL---VDRYITFDALDPTDTALKLS 77 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~--~~g~--~V~~~~R~~~~~~-----~~~~~---~~~~i~~Dl~d~~~~~~~~~ 77 (211)
-+|.|+||+|.||.+++..|+..+.- .++. +++.++++.+... +.+.. .. -+..-..+. +.++
T Consensus 101 ~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~-~v~i~~~~y----e~~k 175 (444)
T PLN00112 101 INVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLR-EVSIGIDPY----EVFQ 175 (444)
T ss_pred eEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcC-ceEEecCCH----HHhC
Confidence 37999999999999999999831000 0144 5788888766521 11110 01 111001222 2245
Q ss_pred hcccccceEEeecccCC---chhHHHHhhcHHHHHHHHHHHHh
Q 028258 78 LISQEITNLFWVPLQVQ---ESEEVNIFKNSTMLKNVLSVLVS 117 (211)
Q Consensus 78 ~~~~~~~~v~~~a~~~~---~~~~~~~~~n~~~~~~l~~~~~~ 117 (211)
+ .|+||.+++... .+..+..+.|...++.+.+.+.+
T Consensus 176 d----aDiVVitAG~prkpG~tR~dLl~~N~~I~k~i~~~I~~ 214 (444)
T PLN00112 176 D----AEWALLIGAKPRGPGMERADLLDINGQIFAEQGKALNE 214 (444)
T ss_pred c----CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 4 577888887743 24556789999999999999988
|
|
| >PLN02602 lactate dehydrogenase | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.039 Score=47.18 Aligned_cols=94 Identities=14% Similarity=0.099 Sum_probs=60.6
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----CCC-----CCceeEEEeeCCCHHHHHHHHHhc
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----FPT-----ALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----~~~-----~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
++|.|+|| |.||++++..|+.. .-.-++..++.++.... +.+ +... +..+ .|.+ .+++
T Consensus 38 ~KI~IIGa-G~VG~~~a~~l~~~---~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~--i~~~-~dy~----~~~d- 105 (350)
T PLN02602 38 TKVSVVGV-GNVGMAIAQTILTQ---DLADELALVDVNPDKLRGEMLDLQHAAAFLPRTK--ILAS-TDYA----VTAG- 105 (350)
T ss_pred CEEEEECC-CHHHHHHHHHHHhC---CCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCE--EEeC-CCHH----HhCC-
Confidence 58999995 99999999999831 12236888888765321 111 1112 2211 1221 1444
Q ss_pred ccccceEEeecccCC---chhHHHHhhcHHHHHHHHHHHHhc
Q 028258 80 SQEITNLFWVPLQVQ---ESEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 80 ~~~~~~v~~~a~~~~---~~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
.|.|+.+|+... .+..+....|....+.+.+.+.++
T Consensus 106 ---aDiVVitAG~~~k~g~tR~dll~~N~~I~~~i~~~I~~~ 144 (350)
T PLN02602 106 ---SDLCIVTAGARQIPGESRLNLLQRNVALFRKIIPELAKY 144 (350)
T ss_pred ---CCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 578888888743 245567788999999999999887
|
|
| >KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only] | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.0078 Score=51.40 Aligned_cols=79 Identities=11% Similarity=-0.076 Sum_probs=49.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCC-CCCCceeEEEeeCCCHHHHHHHHHhcccccceE
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF-PTALVDRYITFDALDPTDTALKLSLISQEITNL 86 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~-~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v 86 (211)
.++.+||.||+|.+|++.++.+. ..+...++..++.+...+ ..-+. -...|..+++-.++..+.....+|+|
T Consensus 157 ~g~~vLv~ggsggVG~~aiQlAk-----~~~~~~v~t~~s~e~~~l~k~lGA--d~vvdy~~~~~~e~~kk~~~~~~DvV 229 (347)
T KOG1198|consen 157 KGKSVLVLGGSGGVGTAAIQLAK-----HAGAIKVVTACSKEKLELVKKLGA--DEVVDYKDENVVELIKKYTGKGVDVV 229 (347)
T ss_pred CCCeEEEEeCCcHHHHHHHHHHH-----hcCCcEEEEEcccchHHHHHHcCC--cEeecCCCHHHHHHHHhhcCCCccEE
Confidence 46789999999999999999888 577444444454443221 11111 22567777554444433212238999
Q ss_pred EeecccC
Q 028258 87 FWVPLQV 93 (211)
Q Consensus 87 ~~~a~~~ 93 (211)
+.|.+..
T Consensus 230 lD~vg~~ 236 (347)
T KOG1198|consen 230 LDCVGGS 236 (347)
T ss_pred EECCCCC
Confidence 9998764
|
|
| >TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.0082 Score=51.25 Aligned_cols=34 Identities=24% Similarity=0.278 Sum_probs=27.5
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEE-eCCC
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGA-ARRP 48 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~-~R~~ 48 (211)
+|.|+||||++|+.+++.|.+ ..++++..+ +++.
T Consensus 2 kVaIiGATG~vG~ellr~L~~----hP~~el~~l~~s~~ 36 (346)
T TIGR01850 2 KVAIVGASGYTGGELLRLLLN----HPEVEITYLVSSRE 36 (346)
T ss_pred EEEEECCCCHHHHHHHHHHHc----CCCceEEEEeccch
Confidence 689999999999999999995 557787744 5443
|
This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons. |
| >PTZ00082 L-lactate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.20 E-value=0.074 Score=44.95 Aligned_cols=98 Identities=9% Similarity=-0.062 Sum_probs=62.7
Q ss_pred ccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCc-EEEEEeCCCCCCC-----------CCCCCceeEEEeeCCCHHH
Q 028258 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRPPPGW-----------FPTALVDRYITFDALDPTD 71 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~-~V~~~~R~~~~~~-----------~~~~~~~~~i~~Dl~d~~~ 71 (211)
|+|-.+++|.|+| +|.+|+.++..|+ ..|. +|..++++++... ......+ +.. ..|.
T Consensus 1 ~~~~~~~KI~IIG-aG~vG~~ia~~la-----~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~-I~~--~~d~-- 69 (321)
T PTZ00082 1 MTMIKRRKISLIG-SGNIGGVMAYLIV-----LKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSK-VIG--TNNY-- 69 (321)
T ss_pred CCCCCCCEEEEEC-CCHHHHHHHHHHH-----hCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeE-EEE--CCCH--
Confidence 4444557899999 6999999999988 4664 7888998776321 0011122 211 1222
Q ss_pred HHHHHHhcccccceEEeecccCCc--------hhHHHHhhcHHHHHHHHHHHHhc
Q 028258 72 TALKLSLISQEITNLFWVPLQVQE--------SEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 72 ~~~~~~~~~~~~~~v~~~a~~~~~--------~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
+.+++ .|.||.+++.... +..+....|....+.+++.+.+.
T Consensus 70 --~~l~~----aDiVI~tag~~~~~~~~~~~~~r~~~l~~n~~i~~~i~~~i~~~ 118 (321)
T PTZ00082 70 --EDIAG----SDVVIVTAGLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKKY 118 (321)
T ss_pred --HHhCC----CCEEEECCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 23454 5788888866431 33345677888888888888887
|
|
| >TIGR01915 npdG NADPH-dependent F420 reductase | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.0073 Score=48.09 Aligned_cols=35 Identities=26% Similarity=0.202 Sum_probs=31.2
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
+|.|+||+|.+|+.++..|. +.|++|++.+|++++
T Consensus 2 kI~IIGG~G~mG~ala~~L~-----~~G~~V~v~~r~~~~ 36 (219)
T TIGR01915 2 KIAVLGGTGDQGKGLALRLA-----KAGNKIIIGSRDLEK 36 (219)
T ss_pred EEEEEcCCCHHHHHHHHHHH-----hCCCEEEEEEcCHHH
Confidence 58999999999999999999 688999999997654
|
This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase. |
| >cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family | Back alignment and domain information |
|---|
Probab=96.13 E-value=0.019 Score=47.07 Aligned_cols=92 Identities=12% Similarity=-0.024 Sum_probs=60.0
Q ss_pred EEEEcCCChHHHHHHHHhhCCCCCCCC----cEEEEEeCCCCCCCC-----C---CC--CceeEEEeeCCCHHHHHHHHH
Q 028258 12 ALIIGVTGISGLSLAEALKNPTTPGSP----WKVYGAARRPPPGWF-----P---TA--LVDRYITFDALDPTDTALKLS 77 (211)
Q Consensus 12 ilVtGatG~iG~~l~~~L~~~~~~~~g----~~V~~~~R~~~~~~~-----~---~~--~~~~~i~~Dl~d~~~~~~~~~ 77 (211)
|.|+||+|.+|..++..|+ ..+ .+|..+++++.+... . .. ..+ + . .++ +..++++
T Consensus 1 I~IIGagG~vG~~ia~~l~-----~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~-i-~--~~~--d~~~~~~ 69 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLA-----DGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIK-V-S--ITD--DPYEAFK 69 (263)
T ss_pred CEEECCCChHHHHHHHHHH-----hCCCCcceEEEEEeCCcccchHHHHHHHHhhhhccCcE-E-E--ECC--chHHHhC
Confidence 4789999999999999998 355 689999987654210 0 01 111 1 1 111 2344555
Q ss_pred hcccccceEEeecccCC---chhHHHHhhcHHHHHHHHHHHHhc
Q 028258 78 LISQEITNLFWVPLQVQ---ESEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 78 ~~~~~~~~v~~~a~~~~---~~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
+ .|.|+.+++... .+..+....|....+.+.+.+.+.
T Consensus 70 ~----aDiVv~t~~~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~ 109 (263)
T cd00650 70 D----ADVVIITAGVGRKPGMGRLDLLKRNVPIVKEIGDNIEKY 109 (263)
T ss_pred C----CCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 5 577877776533 234455677888888999999887
|
Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains |
| >PLN02383 aspartate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=96.07 E-value=0.032 Score=47.64 Aligned_cols=23 Identities=30% Similarity=0.452 Sum_probs=21.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHhh
Q 028258 8 PKSVALIIGVTGISGLSLAEALK 30 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~ 30 (211)
++.+|.|.||||++|+.|++.|.
T Consensus 6 ~~~kVaVvGAtG~vG~eLlrlL~ 28 (344)
T PLN02383 6 NGPSVAIVGVTGAVGQEFLSVLT 28 (344)
T ss_pred CCCeEEEEcCCChHHHHHHHHHH
Confidence 45789999999999999999998
|
|
| >PRK06849 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.01 E-value=0.013 Score=50.76 Aligned_cols=38 Identities=26% Similarity=0.235 Sum_probs=33.8
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
+.+++|||||++..+|..+++.|. +.|++|++++..+.
T Consensus 2 ~~~~~VLI~G~~~~~~l~iar~l~-----~~G~~Vi~~d~~~~ 39 (389)
T PRK06849 2 NTKKTVLITGARAPAALELARLFH-----NAGHTVILADSLKY 39 (389)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEeCCch
Confidence 457899999999999999999999 68999999988754
|
|
| >PTZ00117 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.95 E-value=0.073 Score=44.93 Aligned_cols=96 Identities=11% Similarity=-0.042 Sum_probs=60.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCC-cEEEEEeCCCCCCC-----CCC----CCceeEEEeeCCCHHHHHHHHH
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSP-WKVYGAARRPPPGW-----FPT----ALVDRYITFDALDPTDTALKLS 77 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g-~~V~~~~R~~~~~~-----~~~----~~~~~~i~~Dl~d~~~~~~~~~ 77 (211)
.+++|.|+|| |.+|+.++..|+ ..| .+|..++++++... ..+ ......+.. -.| ++ .++
T Consensus 4 ~~~KI~IIGa-G~vG~~ia~~l~-----~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i~~-~~d---~~-~l~ 72 (319)
T PTZ00117 4 KRKKISMIGA-GQIGSTVALLIL-----QKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNINILG-TNN---YE-DIK 72 (319)
T ss_pred CCcEEEEECC-CHHHHHHHHHHH-----HCCCCeEEEEECCCccchhHHHHHhhhccccCCCeEEEe-CCC---HH-HhC
Confidence 3568999997 999999999988 355 57888998765321 000 000001111 122 22 455
Q ss_pred hcccccceEEeecccCC---chhHHHHhhcHHHHHHHHHHHHhc
Q 028258 78 LISQEITNLFWVPLQVQ---ESEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 78 ~~~~~~~~v~~~a~~~~---~~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
+ .|.|+.+++... .+..+....|....+.+.+.+.+.
T Consensus 73 ~----ADiVVitag~~~~~g~~r~dll~~n~~i~~~i~~~i~~~ 112 (319)
T PTZ00117 73 D----SDVVVITAGVQRKEEMTREDLLTINGKIMKSVAESVKKY 112 (319)
T ss_pred C----CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 4 577888886533 244556778888888888888887
|
|
| >cd05290 LDH_3 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=95.90 E-value=0.22 Score=41.91 Aligned_cols=90 Identities=8% Similarity=-0.020 Sum_probs=60.2
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCc--EEEEEeCCCCCCC-----CCC-------CCceeEEEeeCCCHHHHHHHH
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPW--KVYGAARRPPPGW-----FPT-------ALVDRYITFDALDPTDTALKL 76 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~--~V~~~~R~~~~~~-----~~~-------~~~~~~i~~Dl~d~~~~~~~~ 76 (211)
+|.|+|| |.||+.++..|+. .+. ++..++.++.... +.+ ..+. .... |. +.+
T Consensus 1 Ki~IIGa-G~VG~~~a~~l~~-----~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~-i~~~---~y----~~~ 66 (307)
T cd05290 1 KLVVIGA-GHVGSAVLNYALA-----LGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTK-IRAG---DY----DDC 66 (307)
T ss_pred CEEEECC-CHHHHHHHHHHHh-----cCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEE-EEEC---CH----HHh
Confidence 4788997 9999999999983 333 5888888665321 111 1233 3222 22 234
Q ss_pred HhcccccceEEeecccCCc---h--hHHHHhhcHHHHHHHHHHHHhc
Q 028258 77 SLISQEITNLFWVPLQVQE---S--EEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 77 ~~~~~~~~~v~~~a~~~~~---~--~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
++ .|.|+.+|+.... + ..+....|...++.+.+.+.++
T Consensus 67 ~~----aDivvitaG~~~kpg~tr~R~dll~~N~~I~~~i~~~i~~~ 109 (307)
T cd05290 67 AD----ADIIVITAGPSIDPGNTDDRLDLAQTNAKIIREIMGNITKV 109 (307)
T ss_pred CC----CCEEEECCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHh
Confidence 54 5778888887432 3 3667788999999999999988
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.86 E-value=0.02 Score=48.18 Aligned_cols=37 Identities=24% Similarity=0.320 Sum_probs=29.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~ 48 (211)
|+.+|.|.||||++|..|++.|.+ ....++..+.++.
T Consensus 1 ~~~~VaIvGAtGy~G~eLlrlL~~----hp~~~l~~~~s~~ 37 (313)
T PRK11863 1 MKPKVFIDGEAGTTGLQIRERLAG----RSDIELLSIPEAK 37 (313)
T ss_pred CCcEEEEECCCCHHHHHHHHHHhc----CCCeEEEEEecCC
Confidence 457899999999999999999985 4556777666554
|
|
| >PRK00048 dihydrodipicolinate reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.84 E-value=0.1 Score=42.67 Aligned_cols=36 Identities=19% Similarity=0.273 Sum_probs=28.0
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEE-EeCCCC
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYG-AARRPP 49 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~-~~R~~~ 49 (211)
.+|.|+|++|.+|+.+++.+.+ ..+.++.+ +++++.
T Consensus 2 mkV~IiG~~G~mG~~i~~~l~~----~~~~elvav~d~~~~ 38 (257)
T PRK00048 2 IKVAVAGASGRMGRELIEAVEA----AEDLELVAAVDRPGS 38 (257)
T ss_pred cEEEEECCCCHHHHHHHHHHHh----CCCCEEEEEEecCCc
Confidence 4689999999999999998874 45788665 555543
|
|
| >PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated | Back alignment and domain information |
|---|
Probab=95.83 E-value=0.048 Score=47.11 Aligned_cols=71 Identities=13% Similarity=0.047 Sum_probs=50.8
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccceEEe
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITNLFW 88 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~~ 88 (211)
+|+|+|+| +|..|+.++..+. +.|++|+.++.++...... -.-. ++..|..|.+.+.+.++... +|.|+.
T Consensus 12 ~~~ilIiG-~g~~~~~~~~a~~-----~~G~~v~~~~~~~~~~~~~-~ad~-~~~~~~~d~~~l~~~~~~~~--id~vi~ 81 (395)
T PRK09288 12 ATRVMLLG-SGELGKEVAIEAQ-----RLGVEVIAVDRYANAPAMQ-VAHR-SHVIDMLDGDALRAVIEREK--PDYIVP 81 (395)
T ss_pred CCEEEEEC-CCHHHHHHHHHHH-----HCCCEEEEEeCCCCCchHH-hhhh-eEECCCCCHHHHHHHHHHhC--CCEEEE
Confidence 46899998 5789999999988 6899999999876532111 1113 56778889888888777543 676654
Q ss_pred e
Q 028258 89 V 89 (211)
Q Consensus 89 ~ 89 (211)
.
T Consensus 82 ~ 82 (395)
T PRK09288 82 E 82 (395)
T ss_pred e
Confidence 3
|
|
| >cd05293 LDH_1 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=95.83 E-value=0.11 Score=43.85 Aligned_cols=95 Identities=14% Similarity=0.040 Sum_probs=60.6
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----CCC-----CCceeEEEeeCCCHHHHHHHHHh
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----FPT-----ALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----~~~-----~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
+.+|.|+|| |.||+.++..|+.. ...-++..++.+..... +.+ .... +... .|.+ .+++
T Consensus 3 ~~Ki~IiGa-G~VG~~~a~~l~~~---~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~-v~~~--~dy~----~~~~ 71 (312)
T cd05293 3 RNKVTVVGV-GQVGMACAISILAK---GLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPK-IEAD--KDYS----VTAN 71 (312)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhc---CCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCE-EEEC--CCHH----HhCC
Confidence 458999996 99999999998731 22346888888665311 001 1112 2221 1222 2444
Q ss_pred cccccceEEeecccCCc---hhHHHHhhcHHHHHHHHHHHHhc
Q 028258 79 ISQEITNLFWVPLQVQE---SEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 79 ~~~~~~~v~~~a~~~~~---~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
.|.|+.+++.... +..+....|....+.+.+.+.+.
T Consensus 72 ----adivvitaG~~~k~g~~R~dll~~N~~i~~~~~~~i~~~ 110 (312)
T cd05293 72 ----SKVVIVTAGARQNEGESRLDLVQRNVDIFKGIIPKLVKY 110 (312)
T ss_pred ----CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 5788888876432 44566788999999999988887
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=95.81 E-value=0.037 Score=47.56 Aligned_cols=34 Identities=12% Similarity=0.137 Sum_probs=26.6
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcE---EEEEeCC
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWK---VYGAARR 47 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~---V~~~~R~ 47 (211)
.+|.|.||||++|+.+++.|++ +..+. +..++.+
T Consensus 2 ~~VAIVGATG~vG~ell~llL~----~~~f~~~~l~~~ss~ 38 (369)
T PRK06598 2 KKVGFVGWRGMVGSVLMQRMVE----ENDFDLIEPVFFSTS 38 (369)
T ss_pred eEEEEEeCCCHHHHHHHHHHHh----CCCCCcCcEEEecch
Confidence 4789999999999999996664 66776 6665553
|
|
| >PLN02948 phosphoribosylaminoimidazole carboxylase | Back alignment and domain information |
|---|
Probab=95.78 E-value=0.063 Score=49.04 Aligned_cols=70 Identities=13% Similarity=-0.076 Sum_probs=51.7
Q ss_pred ccccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 2 EKQDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 2 ~~~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
++|.+++.|+|+|+| +|..|+-++..+. +.|++|++++.++....... .-+ .+..|..|.+.+.+..+.+
T Consensus 15 ~~~~~~~~k~IgIIG-gGqlg~mla~aA~-----~lG~~Vi~ld~~~~apa~~~-AD~-~~v~~~~D~~~l~~~a~~~ 84 (577)
T PLN02948 15 KPVHGVSETVVGVLG-GGQLGRMLCQAAS-----QMGIKVKVLDPLEDCPASSV-AAR-HVVGSFDDRAAVREFAKRC 84 (577)
T ss_pred ccccCCCCCEEEEEC-CCHHHHHHHHHHH-----HCCCEEEEEeCCCCCchhhh-Cce-eeeCCCCCHHHHHHHHHHC
Confidence 456667789999998 6799999999999 68999999988765321111 113 5568888988877776663
|
|
| >COG2085 Predicted dinucleotide-binding enzymes [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.77 E-value=0.015 Score=45.82 Aligned_cols=35 Identities=31% Similarity=0.284 Sum_probs=28.4
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
+++.|. |+|.||+.|+++|. ..||+|++-+|+.++
T Consensus 2 ~~~~i~-GtGniG~alA~~~a-----~ag~eV~igs~r~~~ 36 (211)
T COG2085 2 MIIAII-GTGNIGSALALRLA-----KAGHEVIIGSSRGPK 36 (211)
T ss_pred cEEEEe-ccChHHHHHHHHHH-----hCCCeEEEecCCChh
Confidence 456664 59999999999999 699999988776653
|
|
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=95.71 E-value=0.016 Score=51.02 Aligned_cols=71 Identities=18% Similarity=0.122 Sum_probs=51.9
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-C--CCCCceeEEEeeCCCHHHHHHHHHhcccccce
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-F--PTALVDRYITFDALDPTDTALKLSLISQEITN 85 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-~--~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~ 85 (211)
+++++|.|+ |.+|+.+++.|. +.|++|++++++++... . ...++. ++.+|.++++.+.++- ++. .+.
T Consensus 231 ~~~iiIiG~-G~~g~~l~~~L~-----~~~~~v~vid~~~~~~~~~~~~~~~~~-~i~gd~~~~~~L~~~~--~~~-a~~ 300 (453)
T PRK09496 231 VKRVMIVGG-GNIGYYLAKLLE-----KEGYSVKLIERDPERAEELAEELPNTL-VLHGDGTDQELLEEEG--IDE-ADA 300 (453)
T ss_pred CCEEEEECC-CHHHHHHHHHHH-----hCCCeEEEEECCHHHHHHHHHHCCCCe-EEECCCCCHHHHHhcC--Ccc-CCE
Confidence 578999995 999999999999 68999999998876421 0 124677 8999999988765542 222 455
Q ss_pred EEee
Q 028258 86 LFWV 89 (211)
Q Consensus 86 v~~~ 89 (211)
|+.+
T Consensus 301 vi~~ 304 (453)
T PRK09496 301 FIAL 304 (453)
T ss_pred EEEC
Confidence 5433
|
|
| >cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=95.71 E-value=0.015 Score=48.42 Aligned_cols=72 Identities=15% Similarity=0.146 Sum_probs=46.2
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-CCCCCceeEEEeeCCCHHHHHHHHHhcccccceEE
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-FPTALVDRYITFDALDPTDTALKLSLISQEITNLF 87 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~ 87 (211)
+.++||+||+|.+|.++++.+. ..|.+|++++|++.... ....+.. .+ .|..+ +.+.+..... +|.++
T Consensus 163 ~~~vlI~ga~g~vG~~~~~~a~-----~~g~~v~~~~~~~~~~~~~~~~~~~-~~-~~~~~---~~~~~~~~~~-~d~v~ 231 (332)
T cd08259 163 GDTVLVTGAGGGVGIHAIQLAK-----ALGARVIAVTRSPEKLKILKELGAD-YV-IDGSK---FSEDVKKLGG-ADVVI 231 (332)
T ss_pred CCEEEEECCCCHHHHHHHHHHH-----HcCCeEEEEeCCHHHHHHHHHcCCc-EE-EecHH---HHHHHHhccC-CCEEE
Confidence 5689999999999999999998 68999999988654311 0111122 11 12222 3333443333 78888
Q ss_pred eecc
Q 028258 88 WVPL 91 (211)
Q Consensus 88 ~~a~ 91 (211)
++++
T Consensus 232 ~~~g 235 (332)
T cd08259 232 ELVG 235 (332)
T ss_pred ECCC
Confidence 8875
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. |
| >TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent | Back alignment and domain information |
|---|
Probab=95.69 E-value=0.085 Score=45.71 Aligned_cols=98 Identities=10% Similarity=-0.037 Sum_probs=59.0
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCC--CcEEEEE--eCCCCCCC-----CCC------CCceeEEEeeCCCHHHHH
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGS--PWKVYGA--ARRPPPGW-----FPT------ALVDRYITFDALDPTDTA 73 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~--g~~V~~~--~R~~~~~~-----~~~------~~~~~~i~~Dl~d~~~~~ 73 (211)
.-+|.|+||+|.+|.+++..|+..+--.. ...++.+ +++.+... +.+ .++. + .. .+ .
T Consensus 44 p~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~-i-~~--~~----y 115 (387)
T TIGR01757 44 TVNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVS-I-GI--DP----Y 115 (387)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceE-E-ec--CC----H
Confidence 34799999999999999999984211000 1123333 55554321 001 1111 1 11 12 2
Q ss_pred HHHHhcccccceEEeecccCC---chhHHHHhhcHHHHHHHHHHHHhc
Q 028258 74 LKLSLISQEITNLFWVPLQVQ---ESEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 74 ~~~~~~~~~~~~v~~~a~~~~---~~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
+.+++ .|+|+.+|+.+. .+..+....|...++.+.+.+.++
T Consensus 116 ~~~kd----aDIVVitAG~prkpg~tR~dll~~N~~I~k~i~~~I~~~ 159 (387)
T TIGR01757 116 EVFED----ADWALLIGAKPRGPGMERADLLDINGQIFADQGKALNAV 159 (387)
T ss_pred HHhCC----CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 23454 578888888753 245567888999999999999885
|
This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized. |
| >cd05292 LDH_2 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=95.61 E-value=0.042 Score=46.17 Aligned_cols=90 Identities=14% Similarity=0.050 Sum_probs=59.5
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCC--cEEEEEeCCCCCCC-----CCC-----CCceeEEEeeCCCHHHHHHHHHh
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSP--WKVYGAARRPPPGW-----FPT-----ALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g--~~V~~~~R~~~~~~-----~~~-----~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
+|.|+|+ |.+|..++..|+ ..| .+|.++++++.+.. +.+ .... ... .|. +.+++
T Consensus 2 kI~IIGa-G~VG~~~a~~l~-----~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~-i~~---~d~----~~l~~ 67 (308)
T cd05292 2 KVAIVGA-GFVGSTTAYALL-----LRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVR-IYA---GDY----ADCKG 67 (308)
T ss_pred EEEEECC-CHHHHHHHHHHH-----HcCCCCEEEEEECCchhhhhHHHHHHccccccCCeE-Eee---CCH----HHhCC
Confidence 5899996 999999999998 466 57999999765321 111 1111 111 222 22444
Q ss_pred cccccceEEeecccCC---chhHHHHhhcHHHHHHHHHHHHhc
Q 028258 79 ISQEITNLFWVPLQVQ---ESEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 79 ~~~~~~~v~~~a~~~~---~~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
.|.++.+++... .+..+....|....+.+++.+.+.
T Consensus 68 ----aDiViita~~~~~~~~~r~dl~~~n~~i~~~~~~~l~~~ 106 (308)
T cd05292 68 ----ADVVVITAGANQKPGETRLDLLKRNVAIFKEIIPQILKY 106 (308)
T ss_pred ----CCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 577888877643 244456678998888899888877
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >TIGR01142 purT phosphoribosylglycinamide formyltransferase 2 | Back alignment and domain information |
|---|
Probab=95.60 E-value=0.065 Score=46.05 Aligned_cols=69 Identities=13% Similarity=0.043 Sum_probs=50.8
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccceEEee
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITNLFWV 89 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~~~ 89 (211)
+|+|+| +|..|..+++.+. +.|++|++++.++...... -.-+ .+..|..|++.+.+.++..+ +|.|+..
T Consensus 1 kililG-~g~~~~~l~~aa~-----~~G~~v~~~d~~~~~~~~~-~ad~-~~~~~~~d~~~l~~~~~~~~--id~v~~~ 69 (380)
T TIGR01142 1 RVLLLG-SGELGKEVAIEAQ-----RLGVEVIAVDRYANAPAMQ-VAHR-SYVINMLDGDALRAVIEREK--PDYIVPE 69 (380)
T ss_pred CEEEEC-CCHHHHHHHHHHH-----HcCCEEEEEeCCCCCchhh-hCce-EEEcCCCCHHHHHHHHHHhC--CCEEEec
Confidence 589999 6999999999998 6899999999876542211 1124 66678889988888777543 6776543
|
This enzyme is an alternative to PurN (TIGR00639) |
| >cd05295 MDH_like Malate dehydrogenase-like | Back alignment and domain information |
|---|
Probab=95.58 E-value=0.074 Score=46.95 Aligned_cols=98 Identities=6% Similarity=-0.159 Sum_probs=59.9
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCC--CCCcEEEEEeCC--CCCCC-----CC------CCCceeEEEeeCCCHHHHH
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTP--GSPWKVYGAARR--PPPGW-----FP------TALVDRYITFDALDPTDTA 73 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~--~~g~~V~~~~R~--~~~~~-----~~------~~~~~~~i~~Dl~d~~~~~ 73 (211)
.-+|+||||+|.||.+|+..+.+..-- ++...++.++.. ..... +. ...+. +. . .+ .
T Consensus 123 p~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~-i~-~--~~----~ 194 (452)
T cd05295 123 PLQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGIS-VT-T--DL----D 194 (452)
T ss_pred ceEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcE-EE-E--CC----H
Confidence 357999999999999999999842111 112224455553 22110 00 11222 21 1 11 2
Q ss_pred HHHHhcccccceEEeecccCC---chhHHHHhhcHHHHHHHHHHHHhc
Q 028258 74 LKLSLISQEITNLFWVPLQVQ---ESEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 74 ~~~~~~~~~~~~v~~~a~~~~---~~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
+.+++ .|+||.+++... .+..+..+.|...++.+.+.+.+.
T Consensus 195 ea~~d----aDvvIitag~prk~G~~R~DLL~~N~~Ifk~~g~~I~~~ 238 (452)
T cd05295 195 VAFKD----AHVIVLLDDFLIKEGEDLEGCIRSRVAICQLYGPLIEKN 238 (452)
T ss_pred HHhCC----CCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 34555 577887887643 245567789999999999999887
|
These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >COG0027 PurT Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.51 E-value=0.056 Score=45.13 Aligned_cols=70 Identities=13% Similarity=0.042 Sum_probs=53.5
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccceEEe
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITNLFW 88 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~~ 88 (211)
.+++++.| ||-+|+.++-++. .-|.+|++++|-..... .+-.-. ....|+.|.+.+...++..+ +|+|+-
T Consensus 12 a~kvmLLG-SGELGKEvaIe~Q-----RLG~eViAVDrY~~APA-mqVAhr-s~Vi~MlD~~al~avv~rek--Pd~IVp 81 (394)
T COG0027 12 ATKVMLLG-SGELGKEVAIEAQ-----RLGVEVIAVDRYANAPA-MQVAHR-SYVIDMLDGDALRAVVEREK--PDYIVP 81 (394)
T ss_pred CeEEEEec-CCccchHHHHHHH-----hcCCEEEEecCcCCChh-hhhhhh-eeeeeccCHHHHHHHHHhhC--CCeeee
Confidence 35688887 9999999999998 68999999999655321 011112 56789999999999988865 788763
|
|
| >PRK04148 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=95.50 E-value=0.0065 Score=44.63 Aligned_cols=54 Identities=17% Similarity=0.112 Sum_probs=42.8
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-CCCCCceeEEEeeCCCHH
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-FPTALVDRYITFDALDPT 70 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-~~~~~~~~~i~~Dl~d~~ 70 (211)
++++++.| +| -|.+++..|. +.|++|++++.++.... .....++ .+.+|+.+++
T Consensus 17 ~~kileIG-~G-fG~~vA~~L~-----~~G~~ViaIDi~~~aV~~a~~~~~~-~v~dDlf~p~ 71 (134)
T PRK04148 17 NKKIVELG-IG-FYFKVAKKLK-----ESGFDVIVIDINEKAVEKAKKLGLN-AFVDDLFNPN 71 (134)
T ss_pred CCEEEEEE-ec-CCHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHhCCe-EEECcCCCCC
Confidence 46799998 66 8888999999 68999999999877421 1234567 9999999886
|
|
| >PRK10669 putative cation:proton antiport protein; Provisional | Back alignment and domain information |
|---|
Probab=95.48 E-value=0.013 Score=53.24 Aligned_cols=60 Identities=17% Similarity=0.053 Sum_probs=48.6
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-CCCCCceeEEEeeCCCHHHHHHH
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-FPTALVDRYITFDALDPTDTALK 75 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-~~~~~~~~~i~~Dl~d~~~~~~~ 75 (211)
+.+++|.| .|-+|+++++.|. ++|++|++++++++... ..+.+.+ .+.+|.+|++.++++
T Consensus 417 ~~hiiI~G-~G~~G~~la~~L~-----~~g~~vvvId~d~~~~~~~~~~g~~-~i~GD~~~~~~L~~a 477 (558)
T PRK10669 417 CNHALLVG-YGRVGSLLGEKLL-----AAGIPLVVIETSRTRVDELRERGIR-AVLGNAANEEIMQLA 477 (558)
T ss_pred CCCEEEEC-CChHHHHHHHHHH-----HCCCCEEEEECCHHHHHHHHHCCCe-EEEcCCCCHHHHHhc
Confidence 46789998 8999999999999 68999999999876421 2245788 999999998876554
|
|
| >PRK06223 malate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=95.45 E-value=0.11 Score=43.46 Aligned_cols=97 Identities=16% Similarity=0.035 Sum_probs=57.3
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCc-EEEEEeCCCCCCC-----CCCCC-ceeEEEeeCCCHHHHHHHHHhcccc
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRPPPGW-----FPTAL-VDRYITFDALDPTDTALKLSLISQE 82 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~-~V~~~~R~~~~~~-----~~~~~-~~~~i~~Dl~d~~~~~~~~~~~~~~ 82 (211)
++|.|+|| |.+|+.++..|+ ..|. +|++++++++... ..+.. .. .....+....+. +.+++
T Consensus 3 ~KI~VIGa-G~vG~~ia~~la-----~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~-~~~~~i~~~~d~-~~~~~---- 70 (307)
T PRK06223 3 KKISIIGA-GNVGATLAHLLA-----LKELGDVVLFDIVEGVPQGKALDIAEAAPVE-GFDTKITGTNDY-EDIAG---- 70 (307)
T ss_pred CEEEEECC-CHHHHHHHHHHH-----hCCCeEEEEEECCCchhHHHHHHHHhhhhhc-CCCcEEEeCCCH-HHHCC----
Confidence 57999998 999999999998 4544 8999998665321 00100 00 000011100112 23444
Q ss_pred cceEEeecccCCc---hhHHHHhhcHHHHHHHHHHHHhc
Q 028258 83 ITNLFWVPLQVQE---SEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 83 ~~~v~~~a~~~~~---~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
.|.||.+++.+.. +..+....|....+.+++.+.+.
T Consensus 71 aDiVii~~~~p~~~~~~r~~~~~~n~~i~~~i~~~i~~~ 109 (307)
T PRK06223 71 SDVVVITAGVPRKPGMSRDDLLGINAKIMKDVAEGIKKY 109 (307)
T ss_pred CCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 5778877765432 23345566888888888888776
|
|
| >COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only] | Back alignment and domain information |
|---|
Probab=95.43 E-value=0.021 Score=48.39 Aligned_cols=76 Identities=9% Similarity=0.006 Sum_probs=44.8
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC-CCCCCCceeEEEeeCCCHHHHHHHHHhcc--cccce
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-WFPTALVDRYITFDALDPTDTALKLSLIS--QEITN 85 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~-~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~--~~~~~ 85 (211)
.+++||+||+|.+|+..++.+. +.|+.+++++.++.+. .....+.. ...|..+.+ +.+.++.+. ..+|+
T Consensus 143 g~~VLV~gaaGgVG~~aiQlAk-----~~G~~~v~~~~s~~k~~~~~~lGAd--~vi~y~~~~-~~~~v~~~t~g~gvDv 214 (326)
T COG0604 143 GETVLVHGAAGGVGSAAIQLAK-----ALGATVVAVVSSSEKLELLKELGAD--HVINYREED-FVEQVRELTGGKGVDV 214 (326)
T ss_pred CCEEEEecCCchHHHHHHHHHH-----HcCCcEEEEecCHHHHHHHHhcCCC--EEEcCCccc-HHHHHHHHcCCCCceE
Confidence 5789999999999999999888 6886766666554421 11112222 123344433 333333221 12788
Q ss_pred EEeeccc
Q 028258 86 LFWVPLQ 92 (211)
Q Consensus 86 v~~~a~~ 92 (211)
|+.+.+.
T Consensus 215 v~D~vG~ 221 (326)
T COG0604 215 VLDTVGG 221 (326)
T ss_pred EEECCCH
Confidence 8776653
|
|
| >TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=95.40 E-value=0.12 Score=43.36 Aligned_cols=97 Identities=12% Similarity=-0.008 Sum_probs=58.5
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCc-EEEEEeCCCCCCC-----CCCCCc-eeEEEeeCCCHHHHHHHHHhcccc
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRPPPGW-----FPTALV-DRYITFDALDPTDTALKLSLISQE 82 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~-~V~~~~R~~~~~~-----~~~~~~-~~~i~~Dl~d~~~~~~~~~~~~~~ 82 (211)
++|.|+|+ |.+|..++..|+ ..|+ +|+++++.+.... ..++.. + .....+.-..++.+ +++
T Consensus 2 ~KV~VIGa-G~vG~~iA~~la-----~~g~~~VvlvDi~~~l~~g~a~d~~~~~~~~-~~~~~i~~t~d~~~-~~~---- 69 (305)
T TIGR01763 2 KKISVIGA-GFVGATTAFRLA-----EKELADLVLLDVVEGIPQGKALDMYEASPVG-GFDTKVTGTNNYAD-TAN---- 69 (305)
T ss_pred CEEEEECc-CHHHHHHHHHHH-----HcCCCeEEEEeCCCChhHHHHHhhhhhhhcc-CCCcEEEecCCHHH-hCC----
Confidence 46899995 999999999998 4665 7999998544211 011110 0 00011110011222 333
Q ss_pred cceEEeecccCCc---hhHHHHhhcHHHHHHHHHHHHhc
Q 028258 83 ITNLFWVPLQVQE---SEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 83 ~~~v~~~a~~~~~---~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
.|.||.+++.+.. +..+....|....+.+++.+.+.
T Consensus 70 aDiVIitag~p~~~~~sR~~l~~~N~~iv~~i~~~I~~~ 108 (305)
T TIGR01763 70 SDIVVITAGLPRKPGMSREDLLSMNAGIVREVTGRIMEH 108 (305)
T ss_pred CCEEEEcCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 5788888886542 33356677888888888888876
|
The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable. |
| >PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated | Back alignment and domain information |
|---|
Probab=95.36 E-value=0.14 Score=43.58 Aligned_cols=36 Identities=33% Similarity=0.248 Sum_probs=29.8
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCc-EEEEEeCCC
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRP 48 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~-~V~~~~R~~ 48 (211)
.++++|+|.| .|++|++++..|. ..|. ++++++++.
T Consensus 22 L~~~~VlVvG-~GglGs~va~~La-----~aGvg~i~lvD~D~ 58 (339)
T PRK07688 22 LREKHVLIIG-AGALGTANAEMLV-----RAGVGKVTIVDRDY 58 (339)
T ss_pred hcCCcEEEEC-CCHHHHHHHHHHH-----HcCCCeEEEEeCCc
Confidence 3467899999 5999999999999 5777 688888754
|
|
| >PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional | Back alignment and domain information |
|---|
Probab=95.29 E-value=0.085 Score=48.45 Aligned_cols=72 Identities=13% Similarity=-0.013 Sum_probs=53.2
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-CCCCCceeEEEeeCCCHHHHHHHHHhcccccceEE
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-FPTALVDRYITFDALDPTDTALKLSLISQEITNLF 87 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~ 87 (211)
+.+++|.| .|-+|+.+++.|. +.|+++++++++++... ....+.. ++.+|.+|++.++++ +++. .+.++
T Consensus 400 ~~~vII~G-~Gr~G~~va~~L~-----~~g~~vvvID~d~~~v~~~~~~g~~-v~~GDat~~~~L~~a--gi~~-A~~vv 469 (601)
T PRK03659 400 KPQVIIVG-FGRFGQVIGRLLM-----ANKMRITVLERDISAVNLMRKYGYK-VYYGDATQLELLRAA--GAEK-AEAIV 469 (601)
T ss_pred cCCEEEec-CchHHHHHHHHHH-----hCCCCEEEEECCHHHHHHHHhCCCe-EEEeeCCCHHHHHhc--CCcc-CCEEE
Confidence 45788888 9999999999999 68999999999876422 1235678 999999999876654 2222 45554
Q ss_pred eec
Q 028258 88 WVP 90 (211)
Q Consensus 88 ~~a 90 (211)
.+.
T Consensus 470 ~~~ 472 (601)
T PRK03659 470 ITC 472 (601)
T ss_pred EEe
Confidence 333
|
|
| >PRK08040 putative semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.26 E-value=0.044 Score=46.62 Aligned_cols=39 Identities=23% Similarity=0.234 Sum_probs=28.1
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCC
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~ 47 (211)
+++.+|.|.||||++|+.+++.|.+.. ....++..++.+
T Consensus 2 ~~~~~vaIvGATG~vG~ellrlL~~~~--hP~~~l~~laS~ 40 (336)
T PRK08040 2 SEGWNIALLGATGAVGEALLELLAERQ--FPVGELYALASE 40 (336)
T ss_pred CCCCEEEEEccCCHHHHHHHHHHhcCC--CCceEEEEEEcc
Confidence 456789999999999999999998310 133456666544
|
|
| >PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed | Back alignment and domain information |
|---|
Probab=95.24 E-value=0.11 Score=44.65 Aligned_cols=62 Identities=23% Similarity=0.030 Sum_probs=47.2
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
++|+|.|+ |.+|+-++..+. +.|++|++++.++..... .-.-+ .+..|+.|.+.+.+.++.+
T Consensus 3 ~~igilG~-Gql~~ml~~aa~-----~lG~~v~~~d~~~~~pa~-~~ad~-~~~~~~~D~~~l~~~a~~~ 64 (372)
T PRK06019 3 KTIGIIGG-GQLGRMLALAAA-----PLGYKVIVLDPDPDSPAA-QVADE-VIVADYDDVAALRELAEQC 64 (372)
T ss_pred CEEEEECC-CHHHHHHHHHHH-----HcCCEEEEEeCCCCCchh-HhCce-EEecCCCCHHHHHHHHhcC
Confidence 67999995 899999999998 689999999987654211 11123 6678999999888887754
|
|
| >PRK06728 aspartate-semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.24 E-value=0.11 Score=44.28 Aligned_cols=35 Identities=20% Similarity=0.321 Sum_probs=27.1
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcE---EEEEeCC
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWK---VYGAARR 47 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~---V~~~~R~ 47 (211)
+.+|.|.||||++|+.+++.|.+ +..++ +..++..
T Consensus 5 ~~~VaIvGATG~vG~ell~lL~~----h~~f~v~~l~~~aS~ 42 (347)
T PRK06728 5 GYHVAVVGATGAVGQKIIELLEK----ETKFNIAEVTLLSSK 42 (347)
T ss_pred CCEEEEEeCCCHHHHHHHHHHHH----CCCCCcccEEEEECc
Confidence 35799999999999999999984 46666 5555543
|
|
| >PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.20 E-value=0.028 Score=48.53 Aligned_cols=35 Identities=23% Similarity=0.196 Sum_probs=31.5
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCC
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~ 48 (211)
.++|.|+||.|.+|+.+++.|. ..|++|++++|+.
T Consensus 98 ~~~I~IiGG~GlmG~slA~~l~-----~~G~~V~~~d~~~ 132 (374)
T PRK11199 98 LRPVVIVGGKGQLGRLFAKMLT-----LSGYQVRILEQDD 132 (374)
T ss_pred cceEEEEcCCChhhHHHHHHHH-----HCCCeEEEeCCCc
Confidence 3789999999999999999999 6899999999864
|
|
| >TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit | Back alignment and domain information |
|---|
Probab=95.17 E-value=0.022 Score=47.42 Aligned_cols=37 Identities=22% Similarity=0.401 Sum_probs=32.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
.+++++|+| .|.+|+.+++.|. ..|.+|++.+|++.+
T Consensus 150 ~gk~v~IiG-~G~iG~avA~~L~-----~~G~~V~v~~R~~~~ 186 (287)
T TIGR02853 150 HGSNVMVLG-FGRTGMTIARTFS-----ALGARVFVGARSSAD 186 (287)
T ss_pred CCCEEEEEc-ChHHHHHHHHHHH-----HCCCEEEEEeCCHHH
Confidence 368999999 5889999999999 688999999997653
|
This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA. |
| >PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional | Back alignment and domain information |
|---|
Probab=95.14 E-value=0.1 Score=48.10 Aligned_cols=72 Identities=15% Similarity=-0.043 Sum_probs=53.5
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-CCCCCceeEEEeeCCCHHHHHHHHHhcccccceEE
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-FPTALVDRYITFDALDPTDTALKLSLISQEITNLF 87 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~ 87 (211)
.++++|.| .|-+|+.+++.|. ++|+++++++++++... ....+.. ++.+|.+|++.++++ +++. .+.++
T Consensus 400 ~~~vII~G-~Gr~G~~va~~L~-----~~g~~vvvID~d~~~v~~~~~~g~~-v~~GDat~~~~L~~a--gi~~-A~~vv 469 (621)
T PRK03562 400 QPRVIIAG-FGRFGQIVGRLLL-----SSGVKMTVLDHDPDHIETLRKFGMK-VFYGDATRMDLLESA--GAAK-AEVLI 469 (621)
T ss_pred cCcEEEEe-cChHHHHHHHHHH-----hCCCCEEEEECCHHHHHHHHhcCCe-EEEEeCCCHHHHHhc--CCCc-CCEEE
Confidence 46799998 8999999999999 68999999999877432 1235678 999999999876553 3322 45554
Q ss_pred eec
Q 028258 88 WVP 90 (211)
Q Consensus 88 ~~a 90 (211)
.+.
T Consensus 470 v~~ 472 (621)
T PRK03562 470 NAI 472 (621)
T ss_pred EEe
Confidence 443
|
|
| >PRK08306 dipicolinate synthase subunit A; Reviewed | Back alignment and domain information |
|---|
Probab=95.07 E-value=0.025 Score=47.28 Aligned_cols=67 Identities=22% Similarity=0.202 Sum_probs=45.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-CCCCCceeEEEeeCCCHHHHHHHHHhcccccceE
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-FPTALVDRYITFDALDPTDTALKLSLISQEITNL 86 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v 86 (211)
.+++++|+| .|.+|+.++..|. ..|.+|++++|++.... ....+.+ ++ ..+++.+.+++ .|+|
T Consensus 151 ~g~kvlViG-~G~iG~~~a~~L~-----~~Ga~V~v~~r~~~~~~~~~~~G~~-~~-----~~~~l~~~l~~----aDiV 214 (296)
T PRK08306 151 HGSNVLVLG-FGRTGMTLARTLK-----ALGANVTVGARKSAHLARITEMGLS-PF-----HLSELAEEVGK----IDII 214 (296)
T ss_pred CCCEEEEEC-CcHHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHcCCe-ee-----cHHHHHHHhCC----CCEE
Confidence 368999999 5889999999999 68899999999865321 1112333 32 22344455554 5788
Q ss_pred Eeec
Q 028258 87 FWVP 90 (211)
Q Consensus 87 ~~~a 90 (211)
|+++
T Consensus 215 I~t~ 218 (296)
T PRK08306 215 FNTI 218 (296)
T ss_pred EECC
Confidence 8764
|
|
| >cd00300 LDH_like L-lactate dehydrogenase-like enzymes | Back alignment and domain information |
|---|
Probab=95.05 E-value=0.04 Score=46.08 Aligned_cols=90 Identities=18% Similarity=0.061 Sum_probs=59.0
Q ss_pred EEEEcCCChHHHHHHHHhhCCCCCCCC--cEEEEEeCCCCCCC-----CC-----CCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 12 ALIIGVTGISGLSLAEALKNPTTPGSP--WKVYGAARRPPPGW-----FP-----TALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 12 ilVtGatG~iG~~l~~~L~~~~~~~~g--~~V~~~~R~~~~~~-----~~-----~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
|.|+|+ |.+|+.++..|+ ..| .++++++++++... +. ....+ .... .| .+.+++
T Consensus 1 i~iiGa-G~VG~~~a~~l~-----~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~-i~~~--~~----~~~l~~- 66 (300)
T cd00300 1 ITIIGA-GNVGAAVAFALI-----AKGLASELVLVDVNEEKAKGDALDLSHASAFLATGT-IVRG--GD----YADAAD- 66 (300)
T ss_pred CEEECC-CHHHHHHHHHHH-----hcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCe-EEEC--CC----HHHhCC-
Confidence 468885 889999999998 456 67999998765421 00 01112 1111 12 123554
Q ss_pred ccccceEEeecccCC---chhHHHHhhcHHHHHHHHHHHHhc
Q 028258 80 SQEITNLFWVPLQVQ---ESEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 80 ~~~~~~v~~~a~~~~---~~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
.|.||.+++.+. .+..+....|....+.+.+.++++
T Consensus 67 ---aDiVIitag~p~~~~~~R~~l~~~n~~i~~~~~~~i~~~ 105 (300)
T cd00300 67 ---ADIVVITAGAPRKPGETRLDLINRNAPILRSVITNLKKY 105 (300)
T ss_pred ---CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 578888887643 245566788999999999999887
|
Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot |
| >TIGR00518 alaDH alanine dehydrogenase | Back alignment and domain information |
|---|
Probab=94.97 E-value=0.049 Score=46.97 Aligned_cols=74 Identities=16% Similarity=-0.054 Sum_probs=50.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCC-ceeEEEeeCCCHHHHHHHHHhcccccceE
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTAL-VDRYITFDALDPTDTALKLSLISQEITNL 86 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~-~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v 86 (211)
..++++|+|+ |-+|+..++.|. ..|.+|++++|++.+....... -. .+..+..+++.+.+.+++ .|+|
T Consensus 166 ~~~~VlViGa-G~vG~~aa~~a~-----~lGa~V~v~d~~~~~~~~l~~~~g~-~v~~~~~~~~~l~~~l~~----aDvV 234 (370)
T TIGR00518 166 EPGDVTIIGG-GVVGTNAAKMAN-----GLGATVTILDINIDRLRQLDAEFGG-RIHTRYSNAYEIEDAVKR----ADLL 234 (370)
T ss_pred CCceEEEEcC-CHHHHHHHHHHH-----HCCCeEEEEECCHHHHHHHHHhcCc-eeEeccCCHHHHHHHHcc----CCEE
Confidence 3467999985 999999999999 6788999999876532100011 12 334456667777777765 5788
Q ss_pred Eeeccc
Q 028258 87 FWVPLQ 92 (211)
Q Consensus 87 ~~~a~~ 92 (211)
|.++..
T Consensus 235 I~a~~~ 240 (370)
T TIGR00518 235 IGAVLI 240 (370)
T ss_pred EEcccc
Confidence 877643
|
The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP. |
| >PRK10537 voltage-gated potassium channel; Provisional | Back alignment and domain information |
|---|
Probab=94.91 E-value=0.08 Score=46.02 Aligned_cols=59 Identities=15% Similarity=-0.047 Sum_probs=45.1
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHH
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALK 75 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~ 75 (211)
+.+++|.| .|-+|+.++++|. ++|++|++++.+.... ....+.. ++.+|.+|++.++++
T Consensus 240 k~HvII~G-~g~lg~~v~~~L~-----~~g~~vvVId~d~~~~-~~~~g~~-vI~GD~td~e~L~~A 298 (393)
T PRK10537 240 KDHFIICG-HSPLAINTYLGLR-----QRGQAVTVIVPLGLEH-RLPDDAD-LIPGDSSDSAVLKKA 298 (393)
T ss_pred CCeEEEEC-CChHHHHHHHHHH-----HCCCCEEEEECchhhh-hccCCCc-EEEeCCCCHHHHHhc
Confidence 56899998 7889999999998 6788888887653221 1235678 999999998876654
|
|
| >PRK08655 prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.87 E-value=0.038 Score=48.73 Aligned_cols=35 Identities=34% Similarity=0.324 Sum_probs=31.4
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
+|+|+||+|.+|+++++.|. +.|++|++++|++..
T Consensus 2 kI~IIGG~G~mG~slA~~L~-----~~G~~V~v~~r~~~~ 36 (437)
T PRK08655 2 KISIIGGTGGLGKWFARFLK-----EKGFEVIVTGRDPKK 36 (437)
T ss_pred EEEEEecCCHHHHHHHHHHH-----HCCCEEEEEECChHH
Confidence 68999999999999999999 688999999997653
|
|
| >KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.81 E-value=0.27 Score=37.43 Aligned_cols=36 Identities=17% Similarity=0.197 Sum_probs=31.2
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
..+++|-|+-|-+|+++++.+. +.+|-|.-++-...
T Consensus 3 agrVivYGGkGALGSacv~~Fk-----annywV~siDl~eN 38 (236)
T KOG4022|consen 3 AGRVIVYGGKGALGSACVEFFK-----ANNYWVLSIDLSEN 38 (236)
T ss_pred CceEEEEcCcchHhHHHHHHHH-----hcCeEEEEEeeccc
Confidence 4689999999999999999999 78999888776544
|
|
| >PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.80 E-value=0.046 Score=46.15 Aligned_cols=38 Identities=26% Similarity=0.242 Sum_probs=32.4
Q ss_pred ccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
|+++| +|.|+| +|-+|+.++..|+ ..|++|++++|++.
T Consensus 1 ~~~~m--~I~iIG-~G~mG~~ia~~L~-----~~G~~V~~~~r~~~ 38 (328)
T PRK14618 1 MHHGM--RVAVLG-AGAWGTALAVLAA-----SKGVPVRLWARRPE 38 (328)
T ss_pred CCCCC--eEEEEC-cCHHHHHHHHHHH-----HCCCeEEEEeCCHH
Confidence 56655 588887 8999999999999 68999999999754
|
|
| >COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.80 E-value=0.043 Score=46.45 Aligned_cols=36 Identities=22% Similarity=0.263 Sum_probs=29.3
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCC
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~ 48 (211)
+.+|.|.||||+.|..|++.|.+ ....+++..+.+.
T Consensus 2 ~~kV~IvGasGYtG~EL~rlL~~----Hp~ve~~~~ss~~ 37 (349)
T COG0002 2 MIKVGIVGASGYTGLELLRLLAG----HPDVELILISSRE 37 (349)
T ss_pred CceEEEEcCCCCcHHHHHHHHhc----CCCeEEEEeechh
Confidence 46799999999999999999996 6677766655443
|
|
| >PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=94.75 E-value=0.048 Score=47.94 Aligned_cols=36 Identities=22% Similarity=0.262 Sum_probs=31.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
.+|+++|||++| +|.++++.|+ +.|++|++.+++..
T Consensus 4 ~~k~v~v~G~g~-~G~s~a~~l~-----~~G~~V~~~d~~~~ 39 (447)
T PRK02472 4 QNKKVLVLGLAK-SGYAAAKLLH-----KLGANVTVNDGKPF 39 (447)
T ss_pred CCCEEEEEeeCH-HHHHHHHHHH-----HCCCEEEEEcCCCc
Confidence 468899999987 9999999999 79999999987653
|
|
| >PRK00258 aroE shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=94.73 E-value=0.055 Score=44.71 Aligned_cols=37 Identities=16% Similarity=0.073 Sum_probs=31.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCC-cEEEEEeCCCCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSP-WKVYGAARRPPP 50 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g-~~V~~~~R~~~~ 50 (211)
..++++|+|+ |.+|++++..|. ..| .+|++++|+..+
T Consensus 122 ~~k~vlVlGa-Gg~a~ai~~aL~-----~~g~~~V~v~~R~~~~ 159 (278)
T PRK00258 122 KGKRILILGA-GGAARAVILPLL-----DLGVAEITIVNRTVER 159 (278)
T ss_pred CCCEEEEEcC-cHHHHHHHHHHH-----HcCCCEEEEEeCCHHH
Confidence 4578999995 999999999999 577 679999998654
|
|
| >TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase | Back alignment and domain information |
|---|
Probab=94.72 E-value=0.043 Score=45.93 Aligned_cols=37 Identities=22% Similarity=0.218 Sum_probs=31.6
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
+.++||+||+|.+|..+++.+. ..|.+|+++++++.+
T Consensus 139 g~~VLI~ga~g~vG~~aiqlAk-----~~G~~Vi~~~~s~~~ 175 (325)
T TIGR02825 139 GETVMVNAAAGAVGSVVGQIAK-----LKGCKVVGAAGSDEK 175 (325)
T ss_pred CCEEEEeCCccHHHHHHHHHHH-----HcCCEEEEEeCCHHH
Confidence 5789999999999999988777 688999988887553
|
Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase. |
| >COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=94.67 E-value=0.1 Score=44.96 Aligned_cols=34 Identities=24% Similarity=0.225 Sum_probs=29.6
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
+|.|+| |||+|.-..--|. +.||+|++++..+.+
T Consensus 2 kI~viG-tGYVGLv~g~~lA-----~~GHeVv~vDid~~K 35 (414)
T COG1004 2 KITVIG-TGYVGLVTGACLA-----ELGHEVVCVDIDESK 35 (414)
T ss_pred ceEEEC-CchHHHHHHHHHH-----HcCCeEEEEeCCHHH
Confidence 578887 9999999999998 799999999987654
|
|
| >PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=94.58 E-value=0.048 Score=45.69 Aligned_cols=34 Identities=24% Similarity=0.262 Sum_probs=30.6
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
++|.|+| .|.+|+.++..|+ ..|++|++++|++.
T Consensus 3 ~~V~VIG-~G~mG~~iA~~la-----~~G~~V~v~d~~~~ 36 (308)
T PRK06129 3 GSVAIIG-AGLIGRAWAIVFA-----RAGHEVRLWDADPA 36 (308)
T ss_pred cEEEEEC-ccHHHHHHHHHHH-----HCCCeeEEEeCCHH
Confidence 3699999 9999999999999 68999999999864
|
|
| >cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity | Back alignment and domain information |
|---|
Probab=94.49 E-value=0.065 Score=44.63 Aligned_cols=37 Identities=22% Similarity=0.238 Sum_probs=31.8
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
+.++||+||+|.+|..+++.+. ..|.+|+++++++.+
T Consensus 144 g~~vlI~ga~g~vG~~aiqlA~-----~~G~~vi~~~~s~~~ 180 (329)
T cd08294 144 GETVVVNGAAGAVGSLVGQIAK-----IKGCKVIGCAGSDDK 180 (329)
T ss_pred CCEEEEecCccHHHHHHHHHHH-----HcCCEEEEEeCCHHH
Confidence 5789999999999999988887 688999988876653
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac |
| >PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt | Back alignment and domain information |
|---|
Probab=94.48 E-value=0.77 Score=37.41 Aligned_cols=71 Identities=18% Similarity=-0.006 Sum_probs=49.2
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC--CC-CCCCCceeEEEeeCCCHHHHHHHHHhcccccceE
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP--GW-FPTALVDRYITFDALDPTDTALKLSLISQEITNL 86 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~--~~-~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v 86 (211)
|+|||.|||+- |+.|++.|. +.|+ |+...-.... .. ...+.++ ++.+-+.+.+.+.+.++... ++.|
T Consensus 1 m~ILvlgGTtE-~r~la~~L~-----~~g~-v~~sv~t~~g~~~~~~~~~~~~-v~~G~lg~~~~l~~~l~~~~--i~~v 70 (249)
T PF02571_consen 1 MKILVLGGTTE-GRKLAERLA-----EAGY-VIVSVATSYGGELLKPELPGLE-VRVGRLGDEEGLAEFLRENG--IDAV 70 (249)
T ss_pred CEEEEEechHH-HHHHHHHHH-----hcCC-EEEEEEhhhhHhhhccccCCce-EEECCCCCHHHHHHHHHhCC--CcEE
Confidence 57999999874 899999999 6887 5543322211 11 1224567 77888888888999887765 7777
Q ss_pred Eeec
Q 028258 87 FWVP 90 (211)
Q Consensus 87 ~~~a 90 (211)
|..+
T Consensus 71 IDAT 74 (249)
T PF02571_consen 71 IDAT 74 (249)
T ss_pred EECC
Confidence 7654
|
Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process |
| >TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms) | Back alignment and domain information |
|---|
Probab=94.47 E-value=0.06 Score=45.88 Aligned_cols=31 Identities=16% Similarity=0.339 Sum_probs=25.5
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEe
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAA 45 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~ 45 (211)
+|.|+||||++|++|++.|.+ ....+|..+.
T Consensus 2 kVaIvGatG~~G~~L~~~l~~----~~~~~l~~v~ 32 (341)
T TIGR00978 2 RVAVLGATGLVGQKFVKLLAK----HPYFELAKVV 32 (341)
T ss_pred EEEEECCCCHHHHHHHHHHHh----CCCceEEEEE
Confidence 689999999999999999884 3446877773
|
Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan. |
| >cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase | Back alignment and domain information |
|---|
Probab=94.43 E-value=0.083 Score=41.51 Aligned_cols=37 Identities=24% Similarity=0.178 Sum_probs=31.8
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
..+|+++|+|. |.+|+++++.|. +.|++|++.++++.
T Consensus 26 l~gk~v~I~G~-G~vG~~~A~~L~-----~~G~~Vvv~D~~~~ 62 (200)
T cd01075 26 LEGKTVAVQGL-GKVGYKLAEHLL-----EEGAKLIVADINEE 62 (200)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHH-----HCCCEEEEEcCCHH
Confidence 34689999995 799999999999 68999999888754
|
Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc |
| >cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=94.39 E-value=0.086 Score=40.31 Aligned_cols=35 Identities=20% Similarity=0.225 Sum_probs=30.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~ 47 (211)
.+|+++|+|+++.+|..+++.|. +.|.+|+.+.|+
T Consensus 43 ~gk~vlViG~G~~~G~~~a~~L~-----~~g~~V~v~~r~ 77 (168)
T cd01080 43 AGKKVVVVGRSNIVGKPLAALLL-----NRNATVTVCHSK 77 (168)
T ss_pred CCCEEEEECCcHHHHHHHHHHHh-----hCCCEEEEEECC
Confidence 46899999987778999999999 688888888875
|
NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a |
| >KOG0172 consensus Lysine-ketoglutarate reductase/saccharopine dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.37 E-value=0.063 Score=46.09 Aligned_cols=67 Identities=16% Similarity=0.189 Sum_probs=51.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC--CCCCCceeEEEeeCCCHH-HHHHHHHhcc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW--FPTALVDRYITFDALDPT-DTALKLSLIS 80 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~--~~~~~~~~~i~~Dl~d~~-~~~~~~~~~~ 80 (211)
+++.||+.| +||+.+-++..|.+ ....+|++..|...... ....+++ .+..|+.+++ .+.+.++.++
T Consensus 1 ~~~~vlllg-sg~v~~p~~d~ls~----~~dv~vtva~~~~~~~~~~~~~~~~~-av~ldv~~~~~~L~~~v~~~D 70 (445)
T KOG0172|consen 1 TKKGVLLLG-SGFVSRPVADFLSR----KKDVNVTVASRTLKDAEALVKGINIK-AVSLDVADEELALRKEVKPLD 70 (445)
T ss_pred CCcceEEec-CccccchHHHHHhh----cCCceEEEehhhHHHHHHHhcCCCcc-ceEEEccchHHHHHhhhcccc
Confidence 357899998 99999999999995 66778888877554321 1345688 9999999998 6777777654
|
|
| >PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=94.36 E-value=0.061 Score=44.62 Aligned_cols=38 Identities=16% Similarity=0.091 Sum_probs=32.3
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
|+-++|.|+| .|.+|..++..|+ ..|++|++++|+++.
T Consensus 2 ~~~~kI~vIG-aG~mG~~iA~~la-----~~G~~V~l~d~~~~~ 39 (292)
T PRK07530 2 MAIKKVGVIG-AGQMGNGIAHVCA-----LAGYDVLLNDVSADR 39 (292)
T ss_pred CCCCEEEEEC-CcHHHHHHHHHHH-----HCCCeEEEEeCCHHH
Confidence 3447799998 6999999999999 689999999997653
|
|
| >PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional | Back alignment and domain information |
|---|
Probab=94.31 E-value=0.23 Score=41.84 Aligned_cols=36 Identities=19% Similarity=0.244 Sum_probs=32.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
..|++.|.| .|-||+.+++.|. .-|++|++++|...
T Consensus 135 ~g~tvgIvG-~G~IG~~vA~~l~-----afG~~V~~~~~~~~ 170 (312)
T PRK15469 135 EDFTIGILG-AGVLGSKVAQSLQ-----TWGFPLRCWSRSRK 170 (312)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHH-----HCCCEEEEEeCCCC
Confidence 468999998 9999999999999 78999999998654
|
|
| >TIGR01771 L-LDH-NAD L-lactate dehydrogenase | Back alignment and domain information |
|---|
Probab=94.28 E-value=0.32 Score=40.69 Aligned_cols=87 Identities=20% Similarity=0.059 Sum_probs=56.8
Q ss_pred EEcCCChHHHHHHHHhhCCCCCCCC--cEEEEEeCCCCCCC-----CC------CCCceeEEEeeCCCHHHHHHHHHhcc
Q 028258 14 IIGVTGISGLSLAEALKNPTTPGSP--WKVYGAARRPPPGW-----FP------TALVDRYITFDALDPTDTALKLSLIS 80 (211)
Q Consensus 14 VtGatG~iG~~l~~~L~~~~~~~~g--~~V~~~~R~~~~~~-----~~------~~~~~~~i~~Dl~d~~~~~~~~~~~~ 80 (211)
|+| .|.||++++..|+. .+ -++..++++..... +. ...++ +. ..|. +.+++
T Consensus 1 iIG-aG~VG~~~a~~l~~-----~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~-i~---~~~~----~~~~d-- 64 (299)
T TIGR01771 1 IIG-AGNVGSSTAFALLN-----QGIADEIVLIDINKDKAEGEAMDLQHAASFLPTPKK-IR---SGDY----SDCKD-- 64 (299)
T ss_pred CCC-cCHHHHHHHHHHHh-----cCCCCEEEEEeCCCChhhHHHHHHHHhhcccCCCeE-Ee---cCCH----HHHCC--
Confidence 456 59999999999983 33 25888898665321 01 11222 22 1222 23554
Q ss_pred cccceEEeecccCC---chhHHHHhhcHHHHHHHHHHHHhc
Q 028258 81 QEITNLFWVPLQVQ---ESEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 81 ~~~~~v~~~a~~~~---~~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
.|.|+.+++.+. .+..+....|....+.+.+.+.++
T Consensus 65 --aDivVitag~~rk~g~~R~dll~~N~~i~~~~~~~i~~~ 103 (299)
T TIGR01771 65 --ADLVVITAGAPQKPGETRLELVGRNVRIMKSIVPEVVKS 103 (299)
T ss_pred --CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 578888888743 245567888999999999999887
|
This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases. |
| >PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional | Back alignment and domain information |
|---|
Probab=94.25 E-value=0.39 Score=42.77 Aligned_cols=77 Identities=12% Similarity=-0.004 Sum_probs=52.3
Q ss_pred CCCCeEEEEc----------------CCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHH
Q 028258 7 NPKSVALIIG----------------VTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPT 70 (211)
Q Consensus 7 ~~~~~ilVtG----------------atG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~ 70 (211)
..+|+||||+ .||..|.+|++++. ..|.+|+.+.-.-. .. ...+++ ++.. ....
T Consensus 254 l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~-----~~GA~VtlI~Gp~~-~~-~p~~v~-~i~V--~ta~ 323 (475)
T PRK13982 254 LAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAA-----AAGAEVTLISGPVD-LA-DPQGVK-VIHV--ESAR 323 (475)
T ss_pred cCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHH-----HCCCcEEEEeCCcC-CC-CCCCce-EEEe--cCHH
Confidence 4678999998 48999999999999 79999998863222 11 124566 5554 3444
Q ss_pred HHHHHHHhcccccceEEeecccCC
Q 028258 71 DTALKLSLISQEITNLFWVPLQVQ 94 (211)
Q Consensus 71 ~~~~~~~~~~~~~~~v~~~a~~~~ 94 (211)
+..+++...-. .|.+|++|+..+
T Consensus 324 eM~~av~~~~~-~Di~I~aAAVaD 346 (475)
T PRK13982 324 QMLAAVEAALP-ADIAIFAAAVAD 346 (475)
T ss_pred HHHHHHHhhCC-CCEEEEeccccc
Confidence 45555544322 688998887644
|
|
| >PLN02735 carbamoyl-phosphate synthase | Back alignment and domain information |
|---|
Probab=94.22 E-value=0.3 Score=48.07 Aligned_cols=73 Identities=16% Similarity=0.124 Sum_probs=47.9
Q ss_pred CCeEEEEcCCCh-H---------HHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 9 KSVALIIGVTGI-S---------GLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 9 ~~~ilVtGatG~-i---------G~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
.|+|||+|+... | |..+++.|. +.||+|++++.++........-.. ....+..+.+.+.+.++.
T Consensus 23 ~kkVLiiGsG~~~igqa~e~d~SG~q~~kaLk-----e~G~~Vi~vd~np~t~~~~~~~aD-~~yi~p~~~e~v~~ii~~ 96 (1102)
T PLN02735 23 LKKIMILGAGPIVIGQACEFDYSGTQACKALK-----EEGYEVVLINSNPATIMTDPETAD-RTYIAPMTPELVEQVIAK 96 (1102)
T ss_pred CCEEEEECCCccccccceeecchHHHHHHHHH-----HcCCEEEEEeCCcccccCChhhCc-EEEeCCCCHHHHHHHHHH
Confidence 478999995542 3 788999999 799999999987743211111122 223444567777776666
Q ss_pred cccccceEEee
Q 028258 79 ISQEITNLFWV 89 (211)
Q Consensus 79 ~~~~~~~v~~~ 89 (211)
.. +|.|+..
T Consensus 97 e~--~D~Iip~ 105 (1102)
T PLN02735 97 ER--PDALLPT 105 (1102)
T ss_pred hC--CCEEEEC
Confidence 54 7888754
|
|
| >PRK08818 prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.22 E-value=0.091 Score=45.30 Aligned_cols=35 Identities=29% Similarity=0.340 Sum_probs=30.8
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCC
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~ 47 (211)
+++|.|+|.+|.||+.+++.|.+ ..+++|++++|.
T Consensus 4 ~~~I~IIGl~GliGgslA~alk~----~~~~~V~g~D~~ 38 (370)
T PRK08818 4 QPVVGIVGSAGAYGRWLARFLRT----RMQLEVIGHDPA 38 (370)
T ss_pred CCEEEEECCCCHHHHHHHHHHHh----cCCCEEEEEcCC
Confidence 57899999999999999999994 348899999885
|
|
| >COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.18 E-value=0.43 Score=39.03 Aligned_cols=36 Identities=17% Similarity=0.216 Sum_probs=29.1
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEE-EEeCCCC
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVY-GAARRPP 49 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~-~~~R~~~ 49 (211)
.+|.|.||+|-.|+.+++.+.+ ..+.++. +++|.+.
T Consensus 3 iki~V~Ga~GRMG~~ii~~v~~----~~~~~L~aa~~~~~~ 39 (266)
T COG0289 3 IKVAVAGASGRMGRTLIRAVLE----APDLELVAAFDRPGS 39 (266)
T ss_pred ceEEEEcCCChHHHHHHHHHhc----CCCceEEEEEecCCc
Confidence 4599999999999999999996 5677744 5677654
|
|
| >PRK07236 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=94.18 E-value=0.098 Score=45.04 Aligned_cols=40 Identities=28% Similarity=0.403 Sum_probs=33.9
Q ss_pred ccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
|..|+..+|+|.| .|..|..++..|. ..|++|+++.|++.
T Consensus 1 ~~~~~~~~ViIVG-aG~aGl~~A~~L~-----~~G~~v~v~E~~~~ 40 (386)
T PRK07236 1 MTHMSGPRAVVIG-GSLGGLFAALLLR-----RAGWDVDVFERSPT 40 (386)
T ss_pred CCCCCCCeEEEEC-CCHHHHHHHHHHH-----hCCCCEEEEecCCC
Confidence 4456668899998 6999999999999 68999999998764
|
|
| >PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ] | Back alignment and domain information |
|---|
Probab=94.14 E-value=0.13 Score=33.92 Aligned_cols=34 Identities=32% Similarity=0.335 Sum_probs=29.6
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
+++|.| +|++|-.++..|. +.|.+|+.+.|++..
T Consensus 1 ~vvViG-gG~ig~E~A~~l~-----~~g~~vtli~~~~~~ 34 (80)
T PF00070_consen 1 RVVVIG-GGFIGIELAEALA-----ELGKEVTLIERSDRL 34 (80)
T ss_dssp EEEEES-SSHHHHHHHHHHH-----HTTSEEEEEESSSSS
T ss_pred CEEEEC-cCHHHHHHHHHHH-----HhCcEEEEEeccchh
Confidence 467887 8999999999999 688999999998663
|
Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A .... |
| >PRK08229 2-dehydropantoate 2-reductase; Provisional | Back alignment and domain information |
|---|
Probab=94.07 E-value=0.082 Score=44.74 Aligned_cols=33 Identities=21% Similarity=0.201 Sum_probs=29.3
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCC
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~ 48 (211)
++|.|+| +|.+|+.++..|. ..|++|++++|++
T Consensus 3 mkI~IiG-~G~mG~~~A~~L~-----~~G~~V~~~~r~~ 35 (341)
T PRK08229 3 ARICVLG-AGSIGCYLGGRLA-----AAGADVTLIGRAR 35 (341)
T ss_pred ceEEEEC-CCHHHHHHHHHHH-----hcCCcEEEEecHH
Confidence 4689997 9999999999999 6899999999864
|
|
| >cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=94.07 E-value=0.096 Score=38.86 Aligned_cols=36 Identities=25% Similarity=0.191 Sum_probs=30.1
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCC-CcEEEEEeCCCCC
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGS-PWKVYGAARRPPP 50 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~-g~~V~~~~R~~~~ 50 (211)
.++++|+|+ |.+|+.+++.|. .. +++|++++|++.+
T Consensus 19 ~~~i~iiG~-G~~g~~~a~~l~-----~~g~~~v~v~~r~~~~ 55 (155)
T cd01065 19 GKKVLILGA-GGAARAVAYALA-----ELGAAKIVIVNRTLEK 55 (155)
T ss_pred CCEEEEECC-cHHHHHHHHHHH-----HCCCCEEEEEcCCHHH
Confidence 578999996 999999999999 45 4789999987653
|
Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann |
| >TIGR00507 aroE shikimate 5-dehydrogenase | Back alignment and domain information |
|---|
Probab=94.07 E-value=0.087 Score=43.28 Aligned_cols=36 Identities=28% Similarity=0.241 Sum_probs=31.1
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
.|+++|+|+ |.+|++++..|+ ..|++|++++|++.+
T Consensus 117 ~k~vliiGa-Gg~g~aia~~L~-----~~g~~v~v~~R~~~~ 152 (270)
T TIGR00507 117 NQRVLIIGA-GGAARAVALPLL-----KADCNVIIANRTVSK 152 (270)
T ss_pred CCEEEEEcC-cHHHHHHHHHHH-----HCCCEEEEEeCCHHH
Confidence 578999997 899999999999 578899999987653
|
This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain. |
| >PRK06249 2-dehydropantoate 2-reductase; Provisional | Back alignment and domain information |
|---|
Probab=94.06 E-value=0.11 Score=43.72 Aligned_cols=34 Identities=26% Similarity=0.139 Sum_probs=30.0
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
++|+|.| .|-||+.++..|. +.|++|+++.|++.
T Consensus 6 m~I~IiG-~GaiG~~lA~~L~-----~~g~~V~~~~r~~~ 39 (313)
T PRK06249 6 PRIGIIG-TGAIGGFYGAMLA-----RAGFDVHFLLRSDY 39 (313)
T ss_pred cEEEEEC-CCHHHHHHHHHHH-----HCCCeEEEEEeCCH
Confidence 5699997 8999999999999 68999999999753
|
|
| >PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related | Back alignment and domain information |
|---|
Probab=94.06 E-value=0.1 Score=40.06 Aligned_cols=37 Identities=35% Similarity=0.445 Sum_probs=32.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
.++++.|+| .|-||+++++.|. .-|.+|++++|....
T Consensus 35 ~g~tvgIiG-~G~IG~~vA~~l~-----~fG~~V~~~d~~~~~ 71 (178)
T PF02826_consen 35 RGKTVGIIG-YGRIGRAVARRLK-----AFGMRVIGYDRSPKP 71 (178)
T ss_dssp TTSEEEEES-TSHHHHHHHHHHH-----HTT-EEEEEESSCHH
T ss_pred CCCEEEEEE-EcCCcCeEeeeee-----cCCceeEEecccCCh
Confidence 478999998 8999999999999 799999999998663
|
All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A .... |
| >TIGR01745 asd_gamma aspartate-semialdehyde dehydrogenase, gamma-proteobacterial | Back alignment and domain information |
|---|
Probab=94.03 E-value=0.17 Score=43.47 Aligned_cols=27 Identities=15% Similarity=0.334 Sum_probs=22.2
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcE
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWK 40 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~ 40 (211)
++|.|.||||.+|+.+++.|.. +..+.
T Consensus 1 ~~VavvGATG~VG~~ll~~L~~----e~~fp 27 (366)
T TIGR01745 1 KNVGLVGWRGMVGSVLMQRMQE----ERDFD 27 (366)
T ss_pred CeEEEEcCcCHHHHHHHHHHHh----CCCCc
Confidence 4688999999999999999983 35554
|
|
| >PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins | Back alignment and domain information |
|---|
Probab=94.02 E-value=0.084 Score=38.45 Aligned_cols=83 Identities=22% Similarity=0.217 Sum_probs=43.6
Q ss_pred cCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEe-CCCCC-----CC--------C--CCCCceeEEEeeCCC
Q 028258 5 DQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAA-RRPPP-----GW--------F--PTALVDRYITFDALD 68 (211)
Q Consensus 5 ~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~-R~~~~-----~~--------~--~~~~~~~~i~~Dl~d 68 (211)
.+..+.+|-|+| +|-+|.+|.+.|. +.||+|.++. |++.+ .. . .....+ .+-+-+.|
T Consensus 6 ~~~~~l~I~iIG-aGrVG~~La~aL~-----~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~~~~~aD-lv~iavpD 78 (127)
T PF10727_consen 6 TQAARLKIGIIG-AGRVGTALARALA-----RAGHEVVGVYSRSPASAERAAAFIGAGAILDLEEILRDAD-LVFIAVPD 78 (127)
T ss_dssp ------EEEEEC-TSCCCCHHHHHHH-----HTTSEEEEESSCHH-HHHHHHC--TT-----TTGGGCC-S-EEEE-S-C
T ss_pred cCCCccEEEEEC-CCHHHHHHHHHHH-----HCCCeEEEEEeCCcccccccccccccccccccccccccCC-EEEEEech
Confidence 355567899999 5999999999999 6899998874 44321 00 0 013445 55565656
Q ss_pred H--HHHHHHHHhc--ccccceEEeecccCC
Q 028258 69 P--TDTALKLSLI--SQEITNLFWVPLQVQ 94 (211)
Q Consensus 69 ~--~~~~~~~~~~--~~~~~~v~~~a~~~~ 94 (211)
. +.+.+.+... ..+=..|+||.+...
T Consensus 79 daI~~va~~La~~~~~~~g~iVvHtSGa~~ 108 (127)
T PF10727_consen 79 DAIAEVAEQLAQYGAWRPGQIVVHTSGALG 108 (127)
T ss_dssp CHHHHHHHHHHCC--S-TT-EEEES-SS--
T ss_pred HHHHHHHHHHHHhccCCCCcEEEECCCCCh
Confidence 4 2344444432 000246899998754
|
This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A. |
| >PLN02928 oxidoreductase family protein | Back alignment and domain information |
|---|
Probab=93.97 E-value=0.2 Score=42.83 Aligned_cols=35 Identities=26% Similarity=0.311 Sum_probs=31.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~ 48 (211)
.+|++.|.| .|-||+.+++.|. .-|.+|++++|+.
T Consensus 158 ~gktvGIiG-~G~IG~~vA~~l~-----afG~~V~~~dr~~ 192 (347)
T PLN02928 158 FGKTVFILG-YGAIGIELAKRLR-----PFGVKLLATRRSW 192 (347)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHh-----hCCCEEEEECCCC
Confidence 468999998 8999999999999 7899999998864
|
|
| >PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=93.95 E-value=0.097 Score=47.32 Aligned_cols=36 Identities=28% Similarity=0.252 Sum_probs=31.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
.+|+++|+|| |.+|++++..|. +.|++|++++|+.+
T Consensus 378 ~~k~vlIlGa-GGagrAia~~L~-----~~G~~V~i~nR~~e 413 (529)
T PLN02520 378 AGKLFVVIGA-GGAGKALAYGAK-----EKGARVVIANRTYE 413 (529)
T ss_pred CCCEEEEECC-cHHHHHHHHHHH-----HCCCEEEEEcCCHH
Confidence 4688999997 899999999999 68889999988654
|
|
| >COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.95 E-value=0.074 Score=44.91 Aligned_cols=22 Identities=32% Similarity=0.453 Sum_probs=20.3
Q ss_pred CeEEEEcCCChHHHHHHHHhhC
Q 028258 10 SVALIIGVTGISGLSLAEALKN 31 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~ 31 (211)
++|.|.||||.+|+.+++.|.+
T Consensus 2 ~~VavvGATG~VG~~~~~~L~e 23 (334)
T COG0136 2 LNVAVLGATGAVGQVLLELLEE 23 (334)
T ss_pred cEEEEEeccchHHHHHHHHHHh
Confidence 6799999999999999999983
|
|
| >cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=93.88 E-value=0.14 Score=42.50 Aligned_cols=77 Identities=14% Similarity=-0.043 Sum_probs=48.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-CCCCCceeEEEeeCCCHHHHHHHHHhcc-cccce
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-FPTALVDRYITFDALDPTDTALKLSLIS-QEITN 85 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-~~~~~~~~~i~~Dl~d~~~~~~~~~~~~-~~~~~ 85 (211)
.+++++|+|+++.+|..+++.+. ..|++|+.+++++.... ....+.. . ..|..+.+.......... ..+|.
T Consensus 166 ~~~~vlI~g~~~~iG~~~~~~~~-----~~g~~v~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~d~ 238 (342)
T cd08266 166 PGETVLVHGAGSGVGSAAIQIAK-----LFGATVIATAGSEDKLERAKELGAD-Y-VIDYRKEDFVREVRELTGKRGVDV 238 (342)
T ss_pred CCCEEEEECCCchHHHHHHHHHH-----HcCCEEEEEeCCHHHHHHHHHcCCC-e-EEecCChHHHHHHHHHhCCCCCcE
Confidence 35789999999999999999998 68999998888654311 0011112 1 235555443333322211 12788
Q ss_pred EEeecc
Q 028258 86 LFWVPL 91 (211)
Q Consensus 86 v~~~a~ 91 (211)
++++++
T Consensus 239 ~i~~~g 244 (342)
T cd08266 239 VVEHVG 244 (342)
T ss_pred EEECCc
Confidence 888875
|
This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone |
| >COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.83 E-value=0.093 Score=43.49 Aligned_cols=35 Identities=34% Similarity=0.296 Sum_probs=28.9
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
.++|+|.| .|.||+.+++.|. +.|+.|.++.++..
T Consensus 3 ~~~v~IvG-~GliG~s~a~~l~-----~~g~~v~i~g~d~~ 37 (279)
T COG0287 3 SMKVGIVG-LGLMGGSLARALK-----EAGLVVRIIGRDRS 37 (279)
T ss_pred CcEEEEEC-CchHHHHHHHHHH-----HcCCeEEEEeecCc
Confidence 45677766 9999999999999 79999877777654
|
|
| >PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=93.82 E-value=0.076 Score=41.01 Aligned_cols=34 Identities=24% Similarity=0.357 Sum_probs=28.4
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
+|.|.|| |.+|+.++..++ ..|++|+.++++++.
T Consensus 1 ~V~ViGa-G~mG~~iA~~~a-----~~G~~V~l~d~~~~~ 34 (180)
T PF02737_consen 1 KVAVIGA-GTMGRGIAALFA-----RAGYEVTLYDRSPEA 34 (180)
T ss_dssp EEEEES--SHHHHHHHHHHH-----HTTSEEEEE-SSHHH
T ss_pred CEEEEcC-CHHHHHHHHHHH-----hCCCcEEEEECChHH
Confidence 5889995 999999999999 689999999987653
|
1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B .... |
| >PLN00203 glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=93.81 E-value=0.058 Score=48.53 Aligned_cols=36 Identities=25% Similarity=0.280 Sum_probs=30.9
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCc-EEEEEeCCCCC
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRPPP 50 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~-~V~~~~R~~~~ 50 (211)
.++|+|+|+ |.+|+.+++.|. ..|. +|+++.|+..+
T Consensus 266 ~kkVlVIGA-G~mG~~~a~~L~-----~~G~~~V~V~nRs~er 302 (519)
T PLN00203 266 SARVLVIGA-GKMGKLLVKHLV-----SKGCTKMVVVNRSEER 302 (519)
T ss_pred CCEEEEEeC-HHHHHHHHHHHH-----hCCCCeEEEEeCCHHH
Confidence 588999996 999999999999 5776 59999998654
|
|
| >TIGR01035 hemA glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=93.80 E-value=0.071 Score=46.73 Aligned_cols=70 Identities=19% Similarity=0.016 Sum_probs=45.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCC-cEEEEEeCCCCCCC-C-CCCCceeEEEeeCCCHHHHHHHHHhcccccc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSP-WKVYGAARRPPPGW-F-PTALVDRYITFDALDPTDTALKLSLISQEIT 84 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g-~~V~~~~R~~~~~~-~-~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~ 84 (211)
..++++|+|+ |.+|+.+++.|. ..| .+|++++|+..+.. + ..-+.. .+ +.+++.+.+.+ .|
T Consensus 179 ~~~~VlViGa-G~iG~~~a~~L~-----~~G~~~V~v~~rs~~ra~~la~~~g~~-~i-----~~~~l~~~l~~----aD 242 (417)
T TIGR01035 179 KGKKALLIGA-GEMGELVAKHLL-----RKGVGKILIANRTYERAEDLAKELGGE-AV-----KFEDLEEYLAE----AD 242 (417)
T ss_pred cCCEEEEECC-hHHHHHHHHHHH-----HCCCCEEEEEeCCHHHHHHHHHHcCCe-Ee-----eHHHHHHHHhh----CC
Confidence 4578999995 999999999999 577 67999999765421 0 001112 22 22345555554 57
Q ss_pred eEEeecccC
Q 028258 85 NLFWVPLQV 93 (211)
Q Consensus 85 ~v~~~a~~~ 93 (211)
+||.+.+..
T Consensus 243 vVi~aT~s~ 251 (417)
T TIGR01035 243 IVISSTGAP 251 (417)
T ss_pred EEEECCCCC
Confidence 777776543
|
This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA. |
| >PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=93.74 E-value=0.12 Score=43.26 Aligned_cols=36 Identities=19% Similarity=0.126 Sum_probs=30.8
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
-++|.|+| .|.+|+.++..|+ ..|++|++++++++.
T Consensus 4 ~~~I~vIG-aG~mG~~iA~~l~-----~~g~~V~~~d~~~~~ 39 (311)
T PRK06130 4 IQNLAIIG-AGTMGSGIAALFA-----RKGLQVVLIDVMEGA 39 (311)
T ss_pred ccEEEEEC-CCHHHHHHHHHHH-----hCCCeEEEEECCHHH
Confidence 36799998 6999999999999 689999999987643
|
|
| >PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.71 E-value=0.093 Score=45.96 Aligned_cols=35 Identities=26% Similarity=0.324 Sum_probs=31.3
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
++|.|+| .|++|..++..|+ +.||+|+++++++.+
T Consensus 4 ~kI~VIG-lG~~G~~~A~~La-----~~G~~V~~~D~~~~~ 38 (415)
T PRK11064 4 ETISVIG-LGYIGLPTAAAFA-----SRQKQVIGVDINQHA 38 (415)
T ss_pred cEEEEEC-cchhhHHHHHHHH-----hCCCEEEEEeCCHHH
Confidence 5789998 8999999999999 689999999997764
|
|
| >cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR) | Back alignment and domain information |
|---|
Probab=93.69 E-value=0.11 Score=42.57 Aligned_cols=77 Identities=16% Similarity=0.093 Sum_probs=46.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-CCCCCceeEEEeeCCCHHHHHHHHHhcc-cccce
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-FPTALVDRYITFDALDPTDTALKLSLIS-QEITN 85 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-~~~~~~~~~i~~Dl~d~~~~~~~~~~~~-~~~~~ 85 (211)
.+++++|+|++|.+|..+++.+. ..|.+|+++++++.... ...-++. .+ +|..+++......+..+ ..+|.
T Consensus 144 ~g~~vlI~g~~~~~g~~~~~~a~-----~~g~~v~~~~~~~~~~~~~~~~g~~-~~-~~~~~~~~~~~~~~~~~~~~~d~ 216 (325)
T cd08253 144 AGETVLVHGGSGAVGHAAVQLAR-----WAGARVIATASSAEGAELVRQAGAD-AV-FNYRAEDLADRILAATAGQGVDV 216 (325)
T ss_pred CCCEEEEEcCCchHHHHHHHHHH-----HcCCEEEEEeCCHHHHHHHHHcCCC-EE-EeCCCcCHHHHHHHHcCCCceEE
Confidence 35789999999999999999888 68899999888654311 0111222 22 34444332222211111 12788
Q ss_pred EEeecc
Q 028258 86 LFWVPL 91 (211)
Q Consensus 86 v~~~a~ 91 (211)
++++++
T Consensus 217 vi~~~~ 222 (325)
T cd08253 217 IIEVLA 222 (325)
T ss_pred EEECCc
Confidence 888764
|
Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts |
| >TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form | Back alignment and domain information |
|---|
Probab=93.66 E-value=0.13 Score=43.11 Aligned_cols=34 Identities=24% Similarity=0.346 Sum_probs=27.9
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCC
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~ 47 (211)
.+|.|.||||+.|..|++.|.. ....++..+..+
T Consensus 2 ~~v~IvGasGy~G~el~rlL~~----HP~~el~~l~s~ 35 (310)
T TIGR01851 2 PKVFIDGEAGTTGLQIRERLSG----RDDIELLSIAPD 35 (310)
T ss_pred CeEEEECCCChhHHHHHHHHhC----CCCeEEEEEecc
Confidence 4789999999999999999996 566777666543
|
This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment. |
| >PRK07502 cyclohexadienyl dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=93.64 E-value=0.12 Score=43.22 Aligned_cols=37 Identities=30% Similarity=0.393 Sum_probs=30.5
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCc--EEEEEeCCCC
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPW--KVYGAARRPP 49 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~--~V~~~~R~~~ 49 (211)
++.++|.|+| .|.+|+.++..|. ..|+ +|++++|++.
T Consensus 4 ~~~~~I~IIG-~G~mG~sla~~l~-----~~g~~~~V~~~dr~~~ 42 (307)
T PRK07502 4 PLFDRVALIG-IGLIGSSLARAIR-----RLGLAGEIVGADRSAE 42 (307)
T ss_pred cCCcEEEEEe-eCHHHHHHHHHHH-----hcCCCcEEEEEECCHH
Confidence 3446799998 9999999999999 5664 7999999765
|
|
| >PRK13940 glutamyl-tRNA reductase; Provisional | Back alignment and domain information |
|---|
Probab=93.61 E-value=0.051 Score=47.56 Aligned_cols=71 Identities=13% Similarity=0.022 Sum_probs=45.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCc-EEEEEeCCCCCCC-C-C-CCCceeEEEeeCCCHHHHHHHHHhccccc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRPPPGW-F-P-TALVDRYITFDALDPTDTALKLSLISQEI 83 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~-~V~~~~R~~~~~~-~-~-~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~ 83 (211)
.+++++|.| +|.+|+.++..|. ..|. +|+++.|+..+.. + . .+... .+ ..+++.+.+.. .
T Consensus 180 ~~kkvlviG-aG~~a~~va~~L~-----~~g~~~I~V~nRt~~ra~~La~~~~~~~-~~-----~~~~l~~~l~~----a 243 (414)
T PRK13940 180 SSKNVLIIG-AGQTGELLFRHVT-----ALAPKQIMLANRTIEKAQKITSAFRNAS-AH-----YLSELPQLIKK----A 243 (414)
T ss_pred cCCEEEEEc-CcHHHHHHHHHHH-----HcCCCEEEEECCCHHHHHHHHHHhcCCe-Ee-----cHHHHHHHhcc----C
Confidence 458899999 5999999999999 5775 5888888765421 0 0 01112 22 22344555554 5
Q ss_pred ceEEeecccCC
Q 028258 84 TNLFWVPLQVQ 94 (211)
Q Consensus 84 ~~v~~~a~~~~ 94 (211)
|.||+|.+.+.
T Consensus 244 DiVI~aT~a~~ 254 (414)
T PRK13940 244 DIIIAAVNVLE 254 (414)
T ss_pred CEEEECcCCCC
Confidence 78888876554
|
|
| >smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain | Back alignment and domain information |
|---|
Probab=93.60 E-value=0.14 Score=36.62 Aligned_cols=33 Identities=27% Similarity=0.369 Sum_probs=27.2
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEE-eCC
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGA-ARR 47 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~-~R~ 47 (211)
++.|+|++|.+|+.+++.|.+ ..++++.++ .|+
T Consensus 1 ki~iiG~~g~~g~~~~~~l~~----~~~~~l~av~~~~ 34 (122)
T smart00859 1 KVAIVGATGYVGQELLRLLAE----HPDFEVVALAASA 34 (122)
T ss_pred CEEEECCCChHHHHHHHHHhc----CCCceEEEEEech
Confidence 478999999999999999994 468888877 444
|
The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase. |
| >PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=93.60 E-value=0.088 Score=39.80 Aligned_cols=62 Identities=19% Similarity=0.143 Sum_probs=41.6
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-C--------C-----CCCceeEEEeeCCCHHHHHHH
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-F--------P-----TALVDRYITFDALDPTDTALK 75 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-~--------~-----~~~~~~~i~~Dl~d~~~~~~~ 75 (211)
++|.++| .|-+|+.+++.|+ +.||+|++.+|++++.. + . -.+.+ ++-.=+.+.+.+.+.
T Consensus 2 ~~Ig~IG-lG~mG~~~a~~L~-----~~g~~v~~~d~~~~~~~~~~~~g~~~~~s~~e~~~~~d-vvi~~v~~~~~v~~v 74 (163)
T PF03446_consen 2 MKIGFIG-LGNMGSAMARNLA-----KAGYEVTVYDRSPEKAEALAEAGAEVADSPAEAAEQAD-VVILCVPDDDAVEAV 74 (163)
T ss_dssp BEEEEE---SHHHHHHHHHHH-----HTTTEEEEEESSHHHHHHHHHTTEEEESSHHHHHHHBS-EEEE-SSSHHHHHHH
T ss_pred CEEEEEc-hHHHHHHHHHHHH-----hcCCeEEeeccchhhhhhhHHhhhhhhhhhhhHhhccc-ceEeecccchhhhhh
Confidence 5788888 7999999999999 69999999999865310 0 0 02235 555566666666666
Q ss_pred HHh
Q 028258 76 LSL 78 (211)
Q Consensus 76 ~~~ 78 (211)
+.+
T Consensus 75 ~~~ 77 (163)
T PF03446_consen 75 LFG 77 (163)
T ss_dssp HHC
T ss_pred hhh
Confidence 554
|
1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A .... |
| >PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A | Back alignment and domain information |
|---|
Probab=93.60 E-value=0.26 Score=35.15 Aligned_cols=34 Identities=21% Similarity=0.417 Sum_probs=25.7
Q ss_pred CeEEEEcCC---ChHHHHHHHHhhCCCCCCCCcEEEEEeCCC
Q 028258 10 SVALIIGVT---GISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (211)
Q Consensus 10 ~~ilVtGat---G~iG~~l~~~L~~~~~~~~g~~V~~~~R~~ 48 (211)
|++.|.|+| +-.|..+++.|. +.||+|+.+.-+.
T Consensus 1 ksiAVvGaS~~~~~~g~~v~~~l~-----~~G~~v~~Vnp~~ 37 (116)
T PF13380_consen 1 KSIAVVGASDNPGKFGYRVLRNLK-----AAGYEVYPVNPKG 37 (116)
T ss_dssp -EEEEET--SSTTSHHHHHHHHHH-----HTT-EEEEESTTC
T ss_pred CEEEEEcccCCCCChHHHHHHHHH-----hCCCEEEEECCCc
Confidence 679999988 778999999999 6899999886544
|
|
| >PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=93.55 E-value=0.11 Score=43.04 Aligned_cols=35 Identities=17% Similarity=0.135 Sum_probs=31.0
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
++|.|+| .|.+|+.++..|+ ..|++|++++++++.
T Consensus 6 ~~V~ViG-aG~mG~~iA~~~a-----~~G~~V~l~d~~~~~ 40 (286)
T PRK07819 6 QRVGVVG-AGQMGAGIAEVCA-----RAGVDVLVFETTEEL 40 (286)
T ss_pred cEEEEEc-ccHHHHHHHHHHH-----hCCCEEEEEECCHHH
Confidence 5789998 5999999999999 689999999998764
|
|
| >PRK08591 acetyl-CoA carboxylase biotin carboxylase subunit; Validated | Back alignment and domain information |
|---|
Probab=93.53 E-value=0.41 Score=42.22 Aligned_cols=70 Identities=13% Similarity=0.028 Sum_probs=45.0
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC--CCCCCCceeEEEe-------eCCCHHHHHHHHHhc
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG--WFPTALVDRYITF-------DALDPTDTALKLSLI 79 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~--~~~~~~~~~~i~~-------Dl~d~~~~~~~~~~~ 79 (211)
.|++||.| +|.+|..+++.+. +.|++|+++...+... ...... + .+.. ++.|.+.+.+..+..
T Consensus 2 ~k~iLi~g-~g~~a~~i~~aa~-----~~G~~vv~~~~~~d~~a~~~~~ad-~-~~~~~~~~~~~~y~d~~~l~~~a~~~ 73 (451)
T PRK08591 2 FDKILIAN-RGEIALRIIRACK-----ELGIKTVAVHSTADRDALHVQLAD-E-AVCIGPAPSKKSYLNIPAIISAAEIT 73 (451)
T ss_pred cceEEEEC-CCHHHHHHHHHHH-----HcCCeEEEEcChhhccCCCHhHCC-E-EEEeCCCCcccccCCHHHHHHHHHHh
Confidence 48899997 8999999999999 6999998885543321 110111 2 3322 455666666665554
Q ss_pred ccccceEEe
Q 028258 80 SQEITNLFW 88 (211)
Q Consensus 80 ~~~~~~v~~ 88 (211)
+ +|.|+-
T Consensus 74 ~--id~I~p 80 (451)
T PRK08591 74 G--ADAIHP 80 (451)
T ss_pred C--CCEEEE
Confidence 4 677653
|
|
| >PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=93.49 E-value=0.15 Score=42.42 Aligned_cols=34 Identities=21% Similarity=0.189 Sum_probs=30.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAAR 46 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R 46 (211)
.+|+++|.|++|.+|+.++..|+ ..|..|+++.|
T Consensus 158 ~Gk~vvViG~gg~vGkpia~~L~-----~~gatVtv~~~ 191 (283)
T PRK14192 158 AGKHAVVVGRSAILGKPMAMMLL-----NANATVTICHS 191 (283)
T ss_pred CCCEEEEECCcHHHHHHHHHHHH-----hCCCEEEEEeC
Confidence 57899999999999999999999 57778888876
|
|
| >KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=93.49 E-value=0.34 Score=40.76 Aligned_cols=65 Identities=17% Similarity=0.129 Sum_probs=44.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC-C-CCCCCceeEEEeeCC-CHHHHHHHHHhcc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-W-FPTALVDRYITFDAL-DPTDTALKLSLIS 80 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~-~-~~~~~~~~~i~~Dl~-d~~~~~~~~~~~~ 80 (211)
.++++-|+|+.| +|+-=++... +-|++|+++++...+. . ...-+.+ ++ .|.+ |++.+....+..+
T Consensus 181 pG~~vgI~GlGG-LGh~aVq~AK-----AMG~rV~vis~~~~kkeea~~~LGAd-~f-v~~~~d~d~~~~~~~~~d 248 (360)
T KOG0023|consen 181 PGKWVGIVGLGG-LGHMAVQYAK-----AMGMRVTVISTSSKKKEEAIKSLGAD-VF-VDSTEDPDIMKAIMKTTD 248 (360)
T ss_pred CCcEEEEecCcc-cchHHHHHHH-----HhCcEEEEEeCCchhHHHHHHhcCcc-ee-EEecCCHHHHHHHHHhhc
Confidence 578999999999 9987776666 7999999999986432 1 1223445 43 3445 6666666555543
|
|
| >PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.49 E-value=0.15 Score=42.69 Aligned_cols=35 Identities=26% Similarity=0.278 Sum_probs=30.8
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
+++|.|+| +|.+|++++..|. ..||+|++.+|++.
T Consensus 4 ~m~I~iiG-~G~~G~~lA~~l~-----~~G~~V~~~~r~~~ 38 (308)
T PRK14619 4 PKTIAILG-AGAWGSTLAGLAS-----ANGHRVRVWSRRSG 38 (308)
T ss_pred CCEEEEEC-ccHHHHHHHHHHH-----HCCCEEEEEeCCCC
Confidence 45799997 8999999999999 68999999999764
|
|
| >cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=93.48 E-value=0.073 Score=44.75 Aligned_cols=71 Identities=14% Similarity=-0.025 Sum_probs=44.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-C-CCCCceeEEEeeCCCHHHHHHHHHhcccccce
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-F-PTALVDRYITFDALDPTDTALKLSLISQEITN 85 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-~-~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~ 85 (211)
..++|+|+|+ |.+|+.+++.|.+ ..+.+|++++|++.+.. + ..-+.. .+ +.+++.+.+.. .|.
T Consensus 177 ~~~~V~ViGa-G~iG~~~a~~L~~----~g~~~V~v~~r~~~ra~~la~~~g~~-~~-----~~~~~~~~l~~----aDv 241 (311)
T cd05213 177 KGKKVLVIGA-GEMGELAAKHLAA----KGVAEITIANRTYERAEELAKELGGN-AV-----PLDELLELLNE----ADV 241 (311)
T ss_pred cCCEEEEECc-HHHHHHHHHHHHH----cCCCEEEEEeCCHHHHHHHHHHcCCe-EE-----eHHHHHHHHhc----CCE
Confidence 4678999995 9999999999983 23467999999865421 1 011112 22 22345555554 577
Q ss_pred EEeecccC
Q 028258 86 LFWVPLQV 93 (211)
Q Consensus 86 v~~~a~~~ 93 (211)
||.+.+..
T Consensus 242 Vi~at~~~ 249 (311)
T cd05213 242 VISATGAP 249 (311)
T ss_pred EEECCCCC
Confidence 77676544
|
Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, |
| >PRK06111 acetyl-CoA carboxylase biotin carboxylase subunit; Validated | Back alignment and domain information |
|---|
Probab=93.47 E-value=0.41 Score=42.15 Aligned_cols=72 Identities=6% Similarity=-0.103 Sum_probs=48.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCC-CceeEE-------EeeCCCHHHHHHHHHhc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTA-LVDRYI-------TFDALDPTDTALKLSLI 79 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~-~~~~~i-------~~Dl~d~~~~~~~~~~~ 79 (211)
|-|++||.| +|.+|..+++.+. +.|+++++++.++........ .-+ .+ ..|..|.+.+.+..+..
T Consensus 1 ~~~~ililg-~g~~~~~~~~~a~-----~lG~~~v~~~~~~~~~a~~~~~ad~-~~~~~~~~~~~~~~d~~~l~~~~~~~ 73 (450)
T PRK06111 1 MFQKVLIAN-RGEIAVRIIRTCQ-----KLGIRTVAIYSEADRDALHVKMADE-AYLIGGPRVQESYLNLEKIIEIAKKT 73 (450)
T ss_pred CcceEEEEC-CcHHHHHHHHHHH-----HcCCeEEEEechhhccCcchhhCCE-EEEcCCCCccccccCHHHHHHHHHHh
Confidence 358899998 8999999999999 799999988754332110010 111 22 24667777777777765
Q ss_pred ccccceEEe
Q 028258 80 SQEITNLFW 88 (211)
Q Consensus 80 ~~~~~~v~~ 88 (211)
+ +|.|+-
T Consensus 74 ~--id~I~p 80 (450)
T PRK06111 74 G--AEAIHP 80 (450)
T ss_pred C--CCEEEe
Confidence 4 676653
|
|
| >COG2130 Putative NADP-dependent oxidoreductases [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.44 E-value=0.2 Score=41.86 Aligned_cols=75 Identities=19% Similarity=0.082 Sum_probs=48.5
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCC--CCCCceeEEEeeCCCHHHHHHHHHhcc-cccce
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF--PTALVDRYITFDALDPTDTALKLSLIS-QEITN 85 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~--~~~~~~~~i~~Dl~d~~~~~~~~~~~~-~~~~~ 85 (211)
+.+++|+||+|-+|+-+.+... -+|.+|+++.-.+++..+ ..-++. ...|..++ ++.++|++.. +.||+
T Consensus 151 GetvvVSaAaGaVGsvvgQiAK-----lkG~rVVGiaGg~eK~~~l~~~lGfD--~~idyk~~-d~~~~L~~a~P~GIDv 222 (340)
T COG2130 151 GETVVVSAAAGAVGSVVGQIAK-----LKGCRVVGIAGGAEKCDFLTEELGFD--AGIDYKAE-DFAQALKEACPKGIDV 222 (340)
T ss_pred CCEEEEEecccccchHHHHHHH-----hhCCeEEEecCCHHHHHHHHHhcCCc--eeeecCcc-cHHHHHHHHCCCCeEE
Confidence 6799999999999998776655 689999999887765321 112222 23465554 4666665543 33666
Q ss_pred EEeecc
Q 028258 86 LFWVPL 91 (211)
Q Consensus 86 v~~~a~ 91 (211)
.|-+.+
T Consensus 223 yfeNVG 228 (340)
T COG2130 223 YFENVG 228 (340)
T ss_pred EEEcCC
Confidence 554443
|
|
| >PLN02545 3-hydroxybutyryl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=93.35 E-value=0.14 Score=42.49 Aligned_cols=35 Identities=17% Similarity=0.274 Sum_probs=30.8
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
++|.|+| .|.+|+.++..|+ ..|++|++++++++.
T Consensus 5 ~~V~vIG-~G~mG~~iA~~l~-----~~G~~V~~~d~~~~~ 39 (295)
T PLN02545 5 KKVGVVG-AGQMGSGIAQLAA-----AAGMDVWLLDSDPAA 39 (295)
T ss_pred CEEEEEC-CCHHHHHHHHHHH-----hcCCeEEEEeCCHHH
Confidence 6799998 7999999999999 689999999987653
|
|
| >TIGR00877 purD phosphoribosylamine--glycine ligase | Back alignment and domain information |
|---|
Probab=93.35 E-value=0.23 Score=43.43 Aligned_cols=69 Identities=20% Similarity=0.061 Sum_probs=43.5
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccceEE
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITNLF 87 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~ 87 (211)
++|+|+| +|..+..|+..+. ..++.+.++............... ++..|..|.+.+.+..+..+ +|.|+
T Consensus 1 ~kiliiG-~G~~~~~l~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~l~~~~~~~~--id~vi 69 (423)
T TIGR00877 1 MKVLVIG-NGGREHALAWKLA-----QSPLVKYVYVAPGNAGTARLAKNK-NVAISITDIEALVEFAKKKK--IDLAV 69 (423)
T ss_pred CEEEEEC-CChHHHHHHHHHH-----hCCCccEEEEECCCHHHhhhcccc-cccCCCCCHHHHHHHHHHhC--CCEEE
Confidence 3799999 5555999999998 466554444322211110112224 55679999888888877765 67665
|
This enzyme appears as a monofunctional protein in prokaryotes but as part of a larger, multidomain protein in eukaryotes. |
| >PRK12833 acetyl-CoA carboxylase biotin carboxylase subunit; Provisional | Back alignment and domain information |
|---|
Probab=93.29 E-value=0.57 Score=41.66 Aligned_cols=70 Identities=9% Similarity=0.087 Sum_probs=46.4
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCc-eeEEE-e------eCCCHHHHHHHHHhcc
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALV-DRYIT-F------DALDPTDTALKLSLIS 80 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~-~~~i~-~------Dl~d~~~~~~~~~~~~ 80 (211)
.|++||.| .|.++..+++.+. +.|++++++....+.......-. + .+. . |..|.+.+.+..+..+
T Consensus 5 ~~~vLi~~-~geia~~ii~aa~-----~lG~~~v~~~s~~d~~~~~~~~aD~-~~~i~p~~~~~~y~d~~~i~~~a~~~~ 77 (467)
T PRK12833 5 IRKVLVAN-RGEIAVRIIRAAR-----ELGMRTVAACSDADRDSLAARMADE-AVHIGPSHAAKSYLNPAAILAAARQCG 77 (467)
T ss_pred CcEEEEEC-CcHHHHHHHHHHH-----HcCCeEEEEECCCCCCChhHHhCCE-EEecCCCCccccccCHHHHHHHHHHhC
Confidence 48899998 8999999999999 79999887754333211000001 2 222 2 6778778877777665
Q ss_pred cccceEE
Q 028258 81 QEITNLF 87 (211)
Q Consensus 81 ~~~~~v~ 87 (211)
+|.|+
T Consensus 78 --~daI~ 82 (467)
T PRK12833 78 --ADAIH 82 (467)
T ss_pred --CCEEE
Confidence 67664
|
|
| >PLN02256 arogenate dehydrogenase | Back alignment and domain information |
|---|
Probab=93.26 E-value=0.17 Score=42.41 Aligned_cols=37 Identities=24% Similarity=0.187 Sum_probs=31.5
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
+.+++|.|+| .|.+|+.+++.|. +.|++|++++|++.
T Consensus 34 ~~~~kI~IIG-~G~mG~slA~~L~-----~~G~~V~~~d~~~~ 70 (304)
T PLN02256 34 SRKLKIGIVG-FGNFGQFLAKTFV-----KQGHTVLATSRSDY 70 (304)
T ss_pred CCCCEEEEEe-eCHHHHHHHHHHH-----hCCCEEEEEECccH
Confidence 3456899999 7999999999999 57889999998753
|
|
| >PRK12815 carB carbamoyl phosphate synthase large subunit; Reviewed | Back alignment and domain information |
|---|
Probab=93.24 E-value=0.47 Score=46.58 Aligned_cols=73 Identities=21% Similarity=0.136 Sum_probs=48.1
Q ss_pred CCeEEEEcCCCh-H---------HHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 9 KSVALIIGVTGI-S---------GLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 9 ~~~ilVtGatG~-i---------G~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
-|+|||+|+.+. | |+.+++.|. +.|++|++++.++........-.. .+..+..+.+.+.+.++.
T Consensus 7 ~~kvlviG~G~~~igq~~E~d~sg~q~~~aL~-----e~G~~vi~v~~np~~~~~d~~~ad-~~y~ep~~~e~l~~ii~~ 80 (1068)
T PRK12815 7 IQKILVIGSGPIVIGQAAEFDYSGTQACLALK-----EEGYQVVLVNPNPATIMTDPAPAD-TVYFEPLTVEFVKRIIAR 80 (1068)
T ss_pred CCEEEEECCCcchhcchhhhhhHHHHHHHHHH-----HcCCEEEEEeCCcchhhcCcccCC-eeEECCCCHHHHHHHHHH
Confidence 478999997665 2 789999999 799999999877653211111112 233444556667776666
Q ss_pred cccccceEEee
Q 028258 79 ISQEITNLFWV 89 (211)
Q Consensus 79 ~~~~~~~v~~~ 89 (211)
.. +|.|+..
T Consensus 81 e~--~D~Iip~ 89 (1068)
T PRK12815 81 EK--PDALLAT 89 (1068)
T ss_pred hC--cCEEEEC
Confidence 44 7887653
|
|
| >PRK00045 hemA glutamyl-tRNA reductase; Reviewed | Back alignment and domain information |
|---|
Probab=93.23 E-value=0.086 Score=46.29 Aligned_cols=37 Identities=27% Similarity=0.250 Sum_probs=30.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCc-EEEEEeCCCCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRPPP 50 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~-~V~~~~R~~~~ 50 (211)
.+++++|+| +|.+|+.+++.|. ..|. +|++++|++.+
T Consensus 181 ~~~~vlViG-aG~iG~~~a~~L~-----~~G~~~V~v~~r~~~r 218 (423)
T PRK00045 181 SGKKVLVIG-AGEMGELVAKHLA-----EKGVRKITVANRTLER 218 (423)
T ss_pred cCCEEEEEC-chHHHHHHHHHHH-----HCCCCeEEEEeCCHHH
Confidence 458899998 5999999999998 5776 68889997654
|
|
| >PRK06718 precorrin-2 dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=93.22 E-value=0.16 Score=40.05 Aligned_cols=37 Identities=14% Similarity=-0.000 Sum_probs=31.3
Q ss_pred CCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCC
Q 028258 6 QNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (211)
Q Consensus 6 ~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~ 48 (211)
...+|+++|+| .|-+|...++.|+ +.|.+|+++++..
T Consensus 7 ~l~~k~vLVIG-gG~va~~ka~~Ll-----~~ga~V~VIs~~~ 43 (202)
T PRK06718 7 DLSNKRVVIVG-GGKVAGRRAITLL-----KYGAHIVVISPEL 43 (202)
T ss_pred EcCCCEEEEEC-CCHHHHHHHHHHH-----HCCCeEEEEcCCC
Confidence 34578999999 5999999999999 6889999988654
|
|
| >PRK06444 prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.20 E-value=0.12 Score=40.63 Aligned_cols=27 Identities=33% Similarity=0.501 Sum_probs=25.0
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEE
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVY 42 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~ 42 (211)
++.|+||+|.+|+.+++.|. +.||.|+
T Consensus 2 ~~~iiG~~G~mG~~~~~~~~-----~~g~~v~ 28 (197)
T PRK06444 2 MEIIIGKNGRLGRVLCSILD-----DNGLGVY 28 (197)
T ss_pred EEEEEecCCcHHHHHHHHHH-----hCCCEEE
Confidence 68999999999999999999 6899986
|
|
| >PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=93.11 E-value=0.18 Score=42.15 Aligned_cols=35 Identities=26% Similarity=0.263 Sum_probs=31.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEe-CC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAA-RR 47 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~-R~ 47 (211)
.+|+|.|.|.++.+|+.++..|+ ++|+.|+++. |+
T Consensus 157 ~Gk~V~viGrs~~mG~PmA~~L~-----~~g~tVtv~~~rT 192 (296)
T PRK14188 157 SGLNAVVIGRSNLVGKPMAQLLL-----AANATVTIAHSRT 192 (296)
T ss_pred CCCEEEEEcCCcchHHHHHHHHH-----hCCCEEEEECCCC
Confidence 57999999999999999999999 6899999984 54
|
|
| >PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=93.09 E-value=0.11 Score=43.09 Aligned_cols=35 Identities=14% Similarity=0.241 Sum_probs=30.8
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
++|.|+| .|.+|+.++..|+ ..|++|++++++++.
T Consensus 2 ~~V~VIG-~G~mG~~iA~~la-----~~G~~V~~~d~~~~~ 36 (288)
T PRK09260 2 EKLVVVG-AGVMGRGIAYVFA-----VSGFQTTLVDIKQEQ 36 (288)
T ss_pred cEEEEEC-ccHHHHHHHHHHH-----hCCCcEEEEeCCHHH
Confidence 5789998 5999999999999 689999999997654
|
|
| >PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=93.06 E-value=0.2 Score=42.35 Aligned_cols=35 Identities=17% Similarity=0.154 Sum_probs=31.2
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
-++|.|+| +|-+|+.++..|+ ..|++|++.++++.
T Consensus 7 i~~VaVIG-aG~MG~giA~~~a-----~aG~~V~l~D~~~~ 41 (321)
T PRK07066 7 IKTFAAIG-SGVIGSGWVARAL-----AHGLDVVAWDPAPG 41 (321)
T ss_pred CCEEEEEC-cCHHHHHHHHHHH-----hCCCeEEEEeCCHH
Confidence 36799998 7999999999999 69999999998765
|
|
| >PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=93.04 E-value=0.17 Score=42.25 Aligned_cols=36 Identities=25% Similarity=0.272 Sum_probs=32.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~ 48 (211)
.+|+|.|+|.+|.+|+.++..|+ ++|+.|+.+.|+.
T Consensus 158 ~Gk~V~vIG~s~ivG~PmA~~L~-----~~gatVtv~~~~t 193 (301)
T PRK14194 158 TGKHAVVIGRSNIVGKPMAALLL-----QAHCSVTVVHSRS 193 (301)
T ss_pred CCCEEEEECCCCccHHHHHHHHH-----HCCCEEEEECCCC
Confidence 47999999999999999999999 6899999997653
|
|
| >PRK11559 garR tartronate semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=92.93 E-value=0.15 Score=42.23 Aligned_cols=34 Identities=24% Similarity=0.328 Sum_probs=29.9
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
++|.|+| .|.+|+.+++.|. ..|++|++.+|++.
T Consensus 3 ~~IgviG-~G~mG~~~a~~l~-----~~g~~v~~~d~~~~ 36 (296)
T PRK11559 3 MKVGFIG-LGIMGKPMSKNLL-----KAGYSLVVYDRNPE 36 (296)
T ss_pred ceEEEEc-cCHHHHHHHHHHH-----HCCCeEEEEcCCHH
Confidence 4689998 8999999999999 68899999998764
|
|
| >TIGR00514 accC acetyl-CoA carboxylase, biotin carboxylase subunit | Back alignment and domain information |
|---|
Probab=92.91 E-value=0.56 Score=41.40 Aligned_cols=70 Identities=13% Similarity=0.033 Sum_probs=44.3
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC--CCCCCCceeEEEe-------eCCCHHHHHHHHHhc
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG--WFPTALVDRYITF-------DALDPTDTALKLSLI 79 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~--~~~~~~~~~~i~~-------Dl~d~~~~~~~~~~~ 79 (211)
.|++||.| .|.++.-+++.+. +.|++|++++..+... ...... + .+.. +..|.+.+.+..+..
T Consensus 2 ~kkili~g-~g~~~~~~~~aa~-----~lG~~vv~~~~~~d~~a~~~~~aD-~-~~~~~~~~~~~~y~d~~~l~~~a~~~ 73 (449)
T TIGR00514 2 LDKILIAN-RGEIALRILRACK-----ELGIKTVAVHSTADRDALHVLLAD-E-AVCIGPAPSAKSYLNIPNIISAAEIT 73 (449)
T ss_pred cceEEEeC-CCHHHHHHHHHHH-----HcCCeEEEEEChhhhcccccccCC-E-EEEcCCCCchhchhCHHHHHHHHHHh
Confidence 47899996 8999999999999 6999999987543211 111111 2 2222 455555666655544
Q ss_pred ccccceEEe
Q 028258 80 SQEITNLFW 88 (211)
Q Consensus 80 ~~~~~~v~~ 88 (211)
. +|.|+-
T Consensus 74 ~--id~I~p 80 (449)
T TIGR00514 74 G--ADAIHP 80 (449)
T ss_pred C--CCEEEe
Confidence 3 677653
|
This model represents the biotin carboxylase subunit found usually as a component of acetyl-CoA carboxylase. Acetyl-CoA carboxylase is designated EC 6.4.1.2 and this component, biotin carboxylase, has its own designation, EC 6.3.4.14. Homologous domains are found in eukaryotic forms of acetyl-CoA carboxylase and in a number of other carboxylases (e.g. pyruvate carboxylase), but seed members and trusted cutoff are selected so as to exclude these. In some systems, the biotin carboxyl carrier protein and this protein (biotin carboxylase) may be shared by different carboxyltransferases. However, this model is not intended to identify the biotin carboxylase domain of propionyl-coA carboxylase. The model should hit the full length of proteins, except for chloroplast transit peptides in plants. If it hits a domain only of a longer protein, there may be a problem with the identification. |
| >cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=92.87 E-value=0.13 Score=41.21 Aligned_cols=36 Identities=28% Similarity=0.395 Sum_probs=30.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
.++++||+|+++ +|..+++.+. ..|.+|+++++++.
T Consensus 134 ~~~~vli~g~~~-~G~~~~~~a~-----~~g~~v~~~~~~~~ 169 (271)
T cd05188 134 PGDTVLVLGAGG-VGLLAAQLAK-----AAGARVIVTDRSDE 169 (271)
T ss_pred CCCEEEEECCCH-HHHHHHHHHH-----HcCCeEEEEcCCHH
Confidence 357899999999 9999998888 68889999988754
|
The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro |
| >PRK05294 carB carbamoyl phosphate synthase large subunit; Reviewed | Back alignment and domain information |
|---|
Probab=92.87 E-value=0.66 Score=45.57 Aligned_cols=73 Identities=16% Similarity=0.154 Sum_probs=45.5
Q ss_pred CCeEEEEcCCCh-H---------HHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 9 KSVALIIGVTGI-S---------GLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 9 ~~~ilVtGatG~-i---------G~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
.|+|||+|+.+. | |..+++.|. +.|++|++++.++........-.. .......+.+.+.+.++.
T Consensus 7 ~~kvLiig~G~~~igq~~e~d~sg~~~~~aLk-----e~G~~vi~v~~~p~~~~~~~~~aD-~~y~~p~~~e~l~~ii~~ 80 (1066)
T PRK05294 7 IKKILIIGSGPIVIGQACEFDYSGTQACKALR-----EEGYRVVLVNSNPATIMTDPEMAD-ATYIEPITPEFVEKIIEK 80 (1066)
T ss_pred CCEEEEECCchhhhcccccccchHHHHHHHHH-----HcCCEEEEEcCCcccccCCcccCC-EEEECCCCHHHHHHHHHH
Confidence 478999996653 4 478999999 799999999877643110011111 111222345667776665
Q ss_pred cccccceEEee
Q 028258 79 ISQEITNLFWV 89 (211)
Q Consensus 79 ~~~~~~~v~~~ 89 (211)
.. +|.|+..
T Consensus 81 e~--~D~Iip~ 89 (1066)
T PRK05294 81 ER--PDAILPT 89 (1066)
T ss_pred HC--cCEEEEC
Confidence 44 7887754
|
|
| >PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A | Back alignment and domain information |
|---|
Probab=92.87 E-value=0.31 Score=32.04 Aligned_cols=32 Identities=25% Similarity=0.316 Sum_probs=22.1
Q ss_pred CCeEEEEcCCChHHHH--HHHHhhCCCCCCCCcEEEEEeC
Q 028258 9 KSVALIIGVTGISGLS--LAEALKNPTTPGSPWKVYGAAR 46 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~--l~~~L~~~~~~~~g~~V~~~~R 46 (211)
.|++||+|||...|.+ |+..+- .|.+.+++..
T Consensus 39 pK~VLViGaStGyGLAsRIa~aFg------~gA~TiGV~f 72 (78)
T PF12242_consen 39 PKKVLVIGASTGYGLASRIAAAFG------AGADTIGVSF 72 (78)
T ss_dssp -SEEEEES-SSHHHHHHHHHHHHC------C--EEEEEE-
T ss_pred CceEEEEecCCcccHHHHHHHHhc------CCCCEEEEee
Confidence 5899999999999988 666664 6677777764
|
|
| >PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B | Back alignment and domain information |
|---|
Probab=92.86 E-value=0.25 Score=34.41 Aligned_cols=37 Identities=19% Similarity=0.048 Sum_probs=30.4
Q ss_pred CCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCC
Q 028258 6 QNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (211)
Q Consensus 6 ~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~ 48 (211)
+..++++||+|+ |-+|..=++.|+ +.|.+|++++...
T Consensus 4 ~l~~~~vlVvGg-G~va~~k~~~Ll-----~~gA~v~vis~~~ 40 (103)
T PF13241_consen 4 DLKGKRVLVVGG-GPVAARKARLLL-----EAGAKVTVISPEI 40 (103)
T ss_dssp --TT-EEEEEEE-SHHHHHHHHHHC-----CCTBEEEEEESSE
T ss_pred EcCCCEEEEECC-CHHHHHHHHHHH-----hCCCEEEEECCch
Confidence 345789999994 999999999999 6889999999874
|
|
| >PRK12409 D-amino acid dehydrogenase small subunit; Provisional | Back alignment and domain information |
|---|
Probab=92.85 E-value=0.19 Score=43.59 Aligned_cols=33 Identities=33% Similarity=0.422 Sum_probs=29.8
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCC
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~ 48 (211)
++|+|+| +|++|..++.+|. +.|.+|+++.|..
T Consensus 2 ~~vvIIG-aG~~G~~~A~~La-----~~g~~V~vle~~~ 34 (410)
T PRK12409 2 SHIAVIG-AGITGVTTAYALA-----QRGYQVTVFDRHR 34 (410)
T ss_pred CEEEEEC-CCHHHHHHHHHHH-----HCCCeEEEEeCCC
Confidence 5799998 7999999999999 5799999999975
|
|
| >TIGR01161 purK phosphoribosylaminoimidazole carboxylase, PurK protein | Back alignment and domain information |
|---|
Probab=92.85 E-value=0.37 Score=41.03 Aligned_cols=61 Identities=18% Similarity=0.007 Sum_probs=45.0
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
+|+|+|+ |.+|+.++..+. +.|++|++++.++...... -.-+ .+..|+.|++.+.+.++.+
T Consensus 1 ~igiiG~-gql~~~l~~aa~-----~lG~~v~~~d~~~~~p~~~-~ad~-~~~~~~~d~~~i~~~a~~~ 61 (352)
T TIGR01161 1 TVGILGG-GQLGRMLALAAR-----PLGIKVHVLDPDANSPAVQ-VADH-VVLAPFFDPAAIRELAESC 61 (352)
T ss_pred CEEEECC-CHHHHHHHHHHH-----HcCCEEEEECCCCCCChhH-hCce-eEeCCCCCHHHHHHHHhhC
Confidence 4789995 799999999999 6899999998876542111 1113 5577889988888877654
|
Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. This model represents PurK, N5-carboxyaminoimidazole ribonucleotide synthetase, which hydrolyzes ATP and converts AIR to N5-CAIR. PurE converts N5-CAIR to CAIR. In the presence of high concentrations of bicarbonate, PurE is reported able to convert AIR to CAIR directly and without ATP. |
| >cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase | Back alignment and domain information |
|---|
Probab=92.84 E-value=0.17 Score=42.51 Aligned_cols=37 Identities=16% Similarity=0.160 Sum_probs=31.9
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
+.++||+||+|.+|..+++.+. ..|.+|+++++++.+
T Consensus 152 g~~VlI~Ga~G~vG~~aiqlAk-----~~G~~Vi~~~~~~~~ 188 (338)
T cd08295 152 GETVFVSAASGAVGQLVGQLAK-----LKGCYVVGSAGSDEK 188 (338)
T ss_pred CCEEEEecCccHHHHHHHHHHH-----HcCCEEEEEeCCHHH
Confidence 5789999999999999998777 689999988887654
|
This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in |
| >PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional | Back alignment and domain information |
|---|
Probab=92.82 E-value=1.3 Score=37.74 Aligned_cols=36 Identities=33% Similarity=0.285 Sum_probs=29.7
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCc-EEEEEeCCC
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRP 48 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~-~V~~~~R~~ 48 (211)
.++++|+|+| .|.+|+++++.|. ..|. ++++++++.
T Consensus 22 L~~~~VlIiG-~GglGs~va~~La-----~aGvg~i~lvD~D~ 58 (338)
T PRK12475 22 IREKHVLIVG-AGALGAANAEALV-----RAGIGKLTIADRDY 58 (338)
T ss_pred hcCCcEEEEC-CCHHHHHHHHHHH-----HcCCCEEEEEcCCc
Confidence 3567899999 5889999999999 5776 688888764
|
|
| >PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ] | Back alignment and domain information |
|---|
Probab=92.79 E-value=0.11 Score=40.36 Aligned_cols=34 Identities=32% Similarity=0.388 Sum_probs=26.5
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
++|.|+| .|++|.-++..|. +.||+|++++.++.
T Consensus 1 M~I~ViG-lGyvGl~~A~~lA-----~~G~~V~g~D~~~~ 34 (185)
T PF03721_consen 1 MKIAVIG-LGYVGLPLAAALA-----EKGHQVIGVDIDEE 34 (185)
T ss_dssp -EEEEE---STTHHHHHHHHH-----HTTSEEEEE-S-HH
T ss_pred CEEEEEC-CCcchHHHHHHHH-----hCCCEEEEEeCChH
Confidence 4688887 9999999999999 79999999998765
|
The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D .... |
| >cd05288 PGDH Prostaglandin dehydrogenases | Back alignment and domain information |
|---|
Probab=92.70 E-value=0.23 Score=41.28 Aligned_cols=36 Identities=17% Similarity=0.151 Sum_probs=31.4
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
..++||.|++|.+|..+++.+. ..|.+|+++++++.
T Consensus 146 ~~~vlI~g~~g~ig~~~~~~a~-----~~G~~vi~~~~~~~ 181 (329)
T cd05288 146 GETVVVSAAAGAVGSVVGQIAK-----LLGARVVGIAGSDE 181 (329)
T ss_pred CCEEEEecCcchHHHHHHHHHH-----HcCCEEEEEeCCHH
Confidence 5789999999999999999888 68889998887654
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino |
| >PRK06395 phosphoribosylamine--glycine ligase; Provisional | Back alignment and domain information |
|---|
Probab=92.63 E-value=0.75 Score=40.58 Aligned_cols=72 Identities=15% Similarity=0.116 Sum_probs=48.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccceEE
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITNLF 87 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~ 87 (211)
|.++|||+| +|.-..+|+..|. +.+++|+++.-+.......... . ++.+|..|.+.+.+..+..+ +|.|+
T Consensus 1 ~~~kVLvlG-~G~re~al~~~l~-----~~g~~v~~~~~~~Npg~~~~a~-~-~~~~~~~d~e~l~~~~~~~~--id~Vi 70 (435)
T PRK06395 1 MTMKVMLVG-SGGREDAIARAIK-----RSGAILFSVIGHENPSIKKLSK-K-YLFYDEKDYDLIEDFALKNN--VDIVF 70 (435)
T ss_pred CceEEEEEC-CcHHHHHHHHHHH-----hCCCeEEEEECCCChhhhhccc-c-eeecCCCCHHHHHHHHHHhC--CCEEE
Confidence 457899998 7888889999998 5678888765422211100011 3 45688899988888877765 77776
Q ss_pred ee
Q 028258 88 WV 89 (211)
Q Consensus 88 ~~ 89 (211)
-.
T Consensus 71 ~~ 72 (435)
T PRK06395 71 VG 72 (435)
T ss_pred EC
Confidence 43
|
|
| >TIGR02355 moeB molybdopterin synthase sulfurylase MoeB | Back alignment and domain information |
|---|
Probab=92.46 E-value=1.9 Score=34.91 Aligned_cols=36 Identities=19% Similarity=0.095 Sum_probs=28.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcE-EEEEeCCCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWK-VYGAARRPP 49 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~-V~~~~R~~~ 49 (211)
..++|+|.| .|.+|+.++..|. ..|.. +++++.+.-
T Consensus 23 ~~~~VlvvG-~GglGs~va~~La-----~~Gvg~i~lvD~D~v 59 (240)
T TIGR02355 23 KASRVLIVG-LGGLGCAASQYLA-----AAGVGNLTLLDFDTV 59 (240)
T ss_pred hCCcEEEEC-cCHHHHHHHHHHH-----HcCCCEEEEEeCCcc
Confidence 467899998 8999999999999 45644 777776543
|
This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899). |
| >PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=92.46 E-value=0.22 Score=41.29 Aligned_cols=35 Identities=17% Similarity=0.282 Sum_probs=30.9
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
++|.|+| +|.+|+.++..|+ ..|++|+++++++..
T Consensus 4 ~~I~ViG-aG~mG~~iA~~la-----~~G~~V~l~d~~~~~ 38 (291)
T PRK06035 4 KVIGVVG-SGVMGQGIAQVFA-----RTGYDVTIVDVSEEI 38 (291)
T ss_pred cEEEEEC-ccHHHHHHHHHHH-----hcCCeEEEEeCCHHH
Confidence 6799998 7999999999999 689999999987653
|
|
| >cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins | Back alignment and domain information |
|---|
Probab=92.44 E-value=0.6 Score=38.94 Aligned_cols=90 Identities=17% Similarity=0.031 Sum_probs=55.8
Q ss_pred EEEEcCCChHHHHHHHHhhCCCCCCCCc-EEEEEeCCCCCCC-----CCC------CCceeEEEeeCCCHHHHHHHHHhc
Q 028258 12 ALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRPPPGW-----FPT------ALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 12 ilVtGatG~iG~~l~~~L~~~~~~~~g~-~V~~~~R~~~~~~-----~~~------~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
|.|+|| |.+|..++..|+ ..+. +|+++++++.... ..+ .... +... .| . +.+++
T Consensus 1 I~IIGa-G~vG~~ia~~la-----~~~l~eV~L~Di~e~~~~g~~~dl~~~~~~~~~~~~--I~~t-~d---~-~~l~d- 66 (300)
T cd01339 1 ISIIGA-GNVGATLAQLLA-----LKELGDVVLLDIVEGLPQGKALDISQAAPILGSDTK--VTGT-ND---Y-EDIAG- 66 (300)
T ss_pred CEEECC-CHHHHHHHHHHH-----hCCCcEEEEEeCCCcHHHHHHHHHHHhhhhcCCCeE--EEEc-CC---H-HHhCC-
Confidence 468997 999999999988 4555 8999999765311 000 0111 1110 12 1 22444
Q ss_pred ccccceEEeecccCCc---hhHHHHhhcHHHHHHHHHHHHhc
Q 028258 80 SQEITNLFWVPLQVQE---SEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 80 ~~~~~~v~~~a~~~~~---~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
.|.||.+++.+.. +..+....|....+.+++.+.+.
T Consensus 67 ---ADiVIit~g~p~~~~~~r~e~~~~n~~i~~~i~~~i~~~ 105 (300)
T cd01339 67 ---SDVVVITAGIPRKPGMSRDDLLGTNAKIVKEVAENIKKY 105 (300)
T ss_pred ---CCEEEEecCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 5788888776432 22345566888888888888877
|
Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas |
| >PRK08773 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Validated | Back alignment and domain information |
|---|
Probab=92.43 E-value=0.28 Score=42.18 Aligned_cols=40 Identities=28% Similarity=0.369 Sum_probs=33.9
Q ss_pred ccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
|++++...|+|.| .|-.|..++..|. ..|++|.++.|.+.
T Consensus 1 ~~~~~~~dV~IvG-aG~aGl~~A~~La-----~~G~~v~liE~~~~ 40 (392)
T PRK08773 1 MSRRSRRDAVIVG-GGVVGAACALALA-----DAGLSVALVEGREP 40 (392)
T ss_pred CCCCCCCCEEEEC-cCHHHHHHHHHHh-----cCCCEEEEEeCCCC
Confidence 4555567899998 8999999999998 68999999999764
|
|
| >PRK06719 precorrin-2 dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=92.42 E-value=0.26 Score=37.17 Aligned_cols=33 Identities=27% Similarity=0.218 Sum_probs=29.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAAR 46 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R 46 (211)
.+++++|.| .|-+|...++.|+ +.|++|++++.
T Consensus 12 ~~~~vlVvG-GG~va~rka~~Ll-----~~ga~V~VIsp 44 (157)
T PRK06719 12 HNKVVVIIG-GGKIAYRKASGLK-----DTGAFVTVVSP 44 (157)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHH-----hCCCEEEEEcC
Confidence 478999998 8999999999999 68999998853
|
|
| >PRK12767 carbamoyl phosphate synthase-like protein; Provisional | Back alignment and domain information |
|---|
Probab=92.42 E-value=0.47 Score=39.75 Aligned_cols=35 Identities=23% Similarity=0.152 Sum_probs=27.4
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCC-CcEEEEEeCCCCC
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGS-PWKVYGAARRPPP 50 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~-g~~V~~~~R~~~~ 50 (211)
++|||||+++.. .+++.|.+ .. |++|++++.++..
T Consensus 2 ~~vLv~g~~~~~--~~~~~l~~----~~~g~~vi~~d~~~~~ 37 (326)
T PRK12767 2 MNILVTSAGRRV--QLVKALKK----SLLKGRVIGADISELA 37 (326)
T ss_pred ceEEEecCCccH--HHHHHHHH----hccCCEEEEECCCCcc
Confidence 679999997776 88999984 22 6999999877543
|
|
| >COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=92.40 E-value=0.44 Score=40.37 Aligned_cols=34 Identities=32% Similarity=0.302 Sum_probs=31.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~ 47 (211)
.+|++-|+| .|-||+++++.|. .-|.+|++.++-
T Consensus 141 ~gkTvGIiG-~G~IG~~va~~l~-----afgm~v~~~d~~ 174 (324)
T COG0111 141 AGKTVGIIG-LGRIGRAVAKRLK-----AFGMKVIGYDPY 174 (324)
T ss_pred cCCEEEEEC-CCHHHHHHHHHHH-----hCCCeEEEECCC
Confidence 478999998 9999999999999 799999999983
|
|
| >KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=92.32 E-value=0.44 Score=46.72 Aligned_cols=119 Identities=14% Similarity=0.084 Sum_probs=76.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcE-EEEEeCCCCC---------CCCCCCCcee-EEEeeCCCHHHHHHHH
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWK-VYGAARRPPP---------GWFPTALVDR-YITFDALDPTDTALKL 76 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~-V~~~~R~~~~---------~~~~~~~~~~-~i~~Dl~d~~~~~~~~ 76 (211)
..|..+|+|+-|+-|..|++.|. .+|.+ ++..+|+--+ .| ...+++. +-.-|++..+...+.+
T Consensus 1767 peksYii~GGLGGFGLELaqWLi-----~RGar~lVLtSRsGirtGYQa~~vrrW-r~~GVqV~vsT~nitt~~ga~~Li 1840 (2376)
T KOG1202|consen 1767 PEKSYIIVGGLGGFGLELAQWLI-----QRGARKLVLTSRSGIRTGYQALMVRRW-RRRGVQVQVSTSNITTAEGARGLI 1840 (2376)
T ss_pred ccceEEEeccccchhHHHHHHHH-----hcCceEEEEeccccchhhHHHHHHHHH-HhcCeEEEEecccchhhhhHHHHH
Confidence 35789999999999999999999 57777 5555665433 12 1234441 3356777766666666
Q ss_pred Hhccc--ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 77 SLISQ--EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 77 ~~~~~--~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
+.... .+-.|||+|..-.+ +.++..+--..+|.||=.+-+.. ++.+..|+..||..
T Consensus 1841 ~~s~kl~~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~---C~~LdyFv~FSSvs 1907 (2376)
T KOG1202|consen 1841 EESNKLGPVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREI---CPELDYFVVFSSVS 1907 (2376)
T ss_pred HHhhhcccccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhh---CcccceEEEEEeec
Confidence 54332 26678888854221 22222233455677777777777 77788888777643
|
|
| >cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1 | Back alignment and domain information |
|---|
Probab=92.28 E-value=0.21 Score=39.11 Aligned_cols=35 Identities=23% Similarity=0.153 Sum_probs=27.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcE-EEEEeCCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWK-VYGAARRP 48 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~-V~~~~R~~ 48 (211)
+.++|+|.|+. .+|+++++.|. ..|.. +++++...
T Consensus 20 ~~s~VlIiG~g-glG~evak~La-----~~GVg~i~lvD~d~ 55 (197)
T cd01492 20 RSARILLIGLK-GLGAEIAKNLV-----LSGIGSLTILDDRT 55 (197)
T ss_pred HhCcEEEEcCC-HHHHHHHHHHH-----HcCCCEEEEEECCc
Confidence 46789999855 49999999999 57765 88887653
|
Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain. |
| >PLN02775 Probable dihydrodipicolinate reductase | Back alignment and domain information |
|---|
Probab=92.16 E-value=5.6 Score=33.12 Aligned_cols=35 Identities=23% Similarity=0.274 Sum_probs=28.3
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEE-EeCCC
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYG-AARRP 48 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~-~~R~~ 48 (211)
.-+|+|.||+|-+|+.+++.+. +.++++.+ +++.+
T Consensus 11 ~i~V~V~Ga~G~MG~~~~~av~-----~~~~~Lv~~~~~~~ 46 (286)
T PLN02775 11 AIPIMVNGCTGKMGHAVAEAAV-----SAGLQLVPVSFTGP 46 (286)
T ss_pred CCeEEEECCCChHHHHHHHHHh-----cCCCEEEEEecccc
Confidence 3579999999999999999999 57888665 45443
|
|
| >PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=92.08 E-value=0.31 Score=40.50 Aligned_cols=35 Identities=23% Similarity=0.190 Sum_probs=31.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~ 47 (211)
.+|+++|+|+++.+|+-++..|. ..|..|+.+.++
T Consensus 157 ~Gk~vvVIGrs~~VG~pla~lL~-----~~gatVtv~~s~ 191 (286)
T PRK14175 157 EGKNAVVIGRSHIVGQPVSKLLL-----QKNASVTILHSR 191 (286)
T ss_pred CCCEEEEECCCchhHHHHHHHHH-----HCCCeEEEEeCC
Confidence 47899999999999999999999 688899988764
|
|
| >PF02844 GARS_N: Phosphoribosylglycinamide synthetase, N domain; InterPro: IPR020562 Phosphoribosylglycinamide synthetase (6 | Back alignment and domain information |
|---|
Probab=92.07 E-value=1.3 Score=30.87 Aligned_cols=67 Identities=25% Similarity=0.225 Sum_probs=42.6
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccceEEe
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITNLFW 88 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~~ 88 (211)
+|||.| +|.=-.+|+..|.++ ....+|++.--++-- ....+ .+..|.+|.+.+.+..+... +|.||.
T Consensus 2 kVLviG-sGgREHAia~~l~~s---~~v~~v~~aPGN~G~----~~~~~-~~~~~~~d~~~l~~~a~~~~--idlvvv 68 (100)
T PF02844_consen 2 KVLVIG-SGGREHAIAWKLSQS---PSVEEVYVAPGNPGT----AELGK-NVPIDITDPEELADFAKENK--IDLVVV 68 (100)
T ss_dssp EEEEEE-SSHHHHHHHHHHTTC---TTEEEEEEEE--TTG----GGTSE-EE-S-TT-HHHHHHHHHHTT--ESEEEE
T ss_pred EEEEEC-CCHHHHHHHHHHhcC---CCCCEEEEeCCCHHH----Hhhce-ecCCCCCCHHHHHHHHHHcC--CCEEEE
Confidence 699998 888899999999852 223457766544321 12223 55569999999888887765 787753
|
3.4.13 from EC) (GARS) (phosphoribosylamine glycine ligase) [] catalyses the second step in the de novo biosynthesis of purine. The reaction catalysed by phosphoribosylglycinamide synthetase is the ATP-dependent addition of 5-phosphoribosylamine to glycine to form 5'phosphoribosylglycinamide: |
| >COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=92.02 E-value=4 Score=33.22 Aligned_cols=72 Identities=17% Similarity=0.015 Sum_probs=42.3
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccceEEe
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITNLFW 88 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~~ 88 (211)
.+.|+|.|||+- ++.|++.|. ..+..+++.+-...-.....+... ...+-..+.+.+.+.++... ++.+|-
T Consensus 2 ~~~ilvlGGT~D-ar~la~~L~-----~~~~~~~~ss~t~~g~~l~~~~~~-~~~~G~l~~e~l~~~l~e~~--i~llID 72 (257)
T COG2099 2 MMRILLLGGTSD-ARALAKKLA-----AAPVDIILSSLTGYGAKLAEQIGP-VRVGGFLGAEGLAAFLREEG--IDLLID 72 (257)
T ss_pred CceEEEEeccHH-HHHHHHHhh-----ccCccEEEEEcccccccchhccCC-eeecCcCCHHHHHHHHHHcC--CCEEEE
Confidence 356999999975 899999998 454333332221111000112222 44566667788888887765 666664
Q ss_pred e
Q 028258 89 V 89 (211)
Q Consensus 89 ~ 89 (211)
.
T Consensus 73 A 73 (257)
T COG2099 73 A 73 (257)
T ss_pred C
Confidence 4
|
|
| >PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated | Back alignment and domain information |
|---|
Probab=91.96 E-value=0.28 Score=44.01 Aligned_cols=35 Identities=23% Similarity=0.137 Sum_probs=30.6
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
++|.|+| +|.+|+.++..|+ ..|++|++.++++.+
T Consensus 5 ~kIavIG-~G~MG~~iA~~la-----~~G~~V~v~D~~~~~ 39 (495)
T PRK07531 5 MKAACIG-GGVIGGGWAARFL-----LAGIDVAVFDPHPEA 39 (495)
T ss_pred CEEEEEC-cCHHHHHHHHHHH-----hCCCeEEEEeCCHHH
Confidence 4688887 9999999999999 689999999997654
|
|
| >PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=91.94 E-value=0.21 Score=41.20 Aligned_cols=35 Identities=17% Similarity=0.173 Sum_probs=30.3
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
++|.|+| .|.+|..++..|+ ..|++|++++++++.
T Consensus 4 ~kI~VIG-~G~mG~~ia~~la-----~~g~~V~~~d~~~~~ 38 (282)
T PRK05808 4 QKIGVIG-AGTMGNGIAQVCA-----VAGYDVVMVDISDAA 38 (282)
T ss_pred cEEEEEc-cCHHHHHHHHHHH-----HCCCceEEEeCCHHH
Confidence 5688998 6999999999999 689999999987653
|
|
| >COG0026 PurK Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=91.89 E-value=0.89 Score=38.98 Aligned_cols=63 Identities=17% Similarity=-0.011 Sum_probs=48.9
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcc
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLIS 80 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~ 80 (211)
++|.|+| .|.+|+=++.+-. .-|++|+.++-+++... ..-.-+ ++..+.+|++.+.+..+.++
T Consensus 2 ~tvgIlG-GGQLgrMm~~aa~-----~lG~~v~vLdp~~~~PA-~~va~~-~i~~~~dD~~al~ela~~~D 64 (375)
T COG0026 2 KTVGILG-GGQLGRMMALAAA-----RLGIKVIVLDPDADAPA-AQVADR-VIVAAYDDPEALRELAAKCD 64 (375)
T ss_pred CeEEEEc-CcHHHHHHHHHHH-----hcCCEEEEecCCCCCch-hhcccc-eeecCCCCHHHHHHHHhhCC
Confidence 6799998 8999999999988 68999999997666421 011123 67888889999999888754
|
|
| >PRK11880 pyrroline-5-carboxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=91.82 E-value=0.25 Score=40.27 Aligned_cols=35 Identities=17% Similarity=0.122 Sum_probs=28.8
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCC---cEEEEEeCCCCC
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSP---WKVYGAARRPPP 50 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g---~~V~~~~R~~~~ 50 (211)
++|.|+| .|.+|+.+++.|. ..| ++|++++|++.+
T Consensus 3 m~I~iIG-~G~mG~~la~~l~-----~~g~~~~~v~v~~r~~~~ 40 (267)
T PRK11880 3 KKIGFIG-GGNMASAIIGGLL-----ASGVPAKDIIVSDPSPEK 40 (267)
T ss_pred CEEEEEe-chHHHHHHHHHHH-----hCCCCcceEEEEcCCHHH
Confidence 4689998 6999999999999 456 679999997643
|
|
| >PRK06522 2-dehydropantoate 2-reductase; Reviewed | Back alignment and domain information |
|---|
Probab=91.82 E-value=0.26 Score=40.74 Aligned_cols=33 Identities=30% Similarity=0.293 Sum_probs=29.0
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
+|+|.| +|-+|+.++..|. ..|++|+.++|+++
T Consensus 2 ~I~IiG-~G~~G~~~a~~L~-----~~g~~V~~~~r~~~ 34 (304)
T PRK06522 2 KIAILG-AGAIGGLFGAALA-----QAGHDVTLVARRGA 34 (304)
T ss_pred EEEEEC-CCHHHHHHHHHHH-----hCCCeEEEEECChH
Confidence 589999 5999999999999 58899999999654
|
|
| >cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E | Back alignment and domain information |
|---|
Probab=91.77 E-value=1.1 Score=36.05 Aligned_cols=36 Identities=25% Similarity=0.114 Sum_probs=28.4
Q ss_pred CCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCc-EEEEEeCC
Q 028258 6 QNPKSVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARR 47 (211)
Q Consensus 6 ~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~-~V~~~~R~ 47 (211)
.-++++|+|.| .|.+|+++++.|. ..|. ++++++.+
T Consensus 8 ~L~~~~VlVvG-~GGvGs~va~~La-----r~GVg~i~LvD~D 44 (231)
T cd00755 8 KLRNAHVAVVG-LGGVGSWAAEALA-----RSGVGKLTLIDFD 44 (231)
T ss_pred HHhCCCEEEEC-CCHHHHHHHHHHH-----HcCCCEEEEECCC
Confidence 33567899998 8999999999999 4665 47777754
|
coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown. |
| >PRK07417 arogenate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=91.76 E-value=0.24 Score=40.87 Aligned_cols=33 Identities=36% Similarity=0.505 Sum_probs=29.3
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
+|.|+| .|.+|+.++..|. ..|++|++++|++.
T Consensus 2 ~I~IIG-~G~mG~sla~~L~-----~~g~~V~~~d~~~~ 34 (279)
T PRK07417 2 KIGIVG-LGLIGGSLGLDLR-----SLGHTVYGVSRRES 34 (279)
T ss_pred eEEEEe-ecHHHHHHHHHHH-----HCCCEEEEEECCHH
Confidence 588898 8999999999999 57899999998764
|
|
| >PRK08410 2-hydroxyacid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=91.73 E-value=0.96 Score=38.06 Aligned_cols=36 Identities=22% Similarity=0.035 Sum_probs=31.7
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCC
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~ 48 (211)
-.+|++.|.| .|-||+.+++.|. .-|.+|++.+|..
T Consensus 143 L~gktvGIiG-~G~IG~~vA~~~~-----~fgm~V~~~d~~~ 178 (311)
T PRK08410 143 IKGKKWGIIG-LGTIGKRVAKIAQ-----AFGAKVVYYSTSG 178 (311)
T ss_pred cCCCEEEEEC-CCHHHHHHHHHHh-----hcCCEEEEECCCc
Confidence 4579999998 8999999999998 7899999998853
|
|
| >COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=91.66 E-value=0.76 Score=38.93 Aligned_cols=36 Identities=36% Similarity=0.353 Sum_probs=32.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
.+|++.|+| .|-||+++++.|. .-|.+|...+|++.
T Consensus 145 ~gktvGIiG-~GrIG~avA~r~~-----~Fgm~v~y~~~~~~ 180 (324)
T COG1052 145 RGKTLGIIG-LGRIGQAVARRLK-----GFGMKVLYYDRSPN 180 (324)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHh-----cCCCEEEEECCCCC
Confidence 479999998 9999999999998 78899999999875
|
|
| >PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain | Back alignment and domain information |
|---|
Probab=91.64 E-value=0.3 Score=33.06 Aligned_cols=34 Identities=35% Similarity=0.368 Sum_probs=27.5
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCC---cEEEEE-eCCCCC
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSP---WKVYGA-ARRPPP 50 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g---~~V~~~-~R~~~~ 50 (211)
+|.|+| +|-+|++|++.|+ +.| ++|+.. +|++++
T Consensus 1 kI~iIG-~G~mg~al~~~l~-----~~g~~~~~v~~~~~r~~~~ 38 (96)
T PF03807_consen 1 KIGIIG-AGNMGSALARGLL-----ASGIKPHEVIIVSSRSPEK 38 (96)
T ss_dssp EEEEES-TSHHHHHHHHHHH-----HTTS-GGEEEEEEESSHHH
T ss_pred CEEEEC-CCHHHHHHHHHHH-----HCCCCceeEEeeccCcHHH
Confidence 466775 9999999999999 577 888855 887764
|
It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D .... |
| >PRK09880 L-idonate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=91.60 E-value=0.27 Score=41.51 Aligned_cols=75 Identities=16% Similarity=0.040 Sum_probs=45.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCc-EEEEEeCCCCCCCC-CCCCceeEEEeeCCCHHHHHHHHHhcccccce
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRPPPGWF-PTALVDRYITFDALDPTDTALKLSLISQEITN 85 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~-~V~~~~R~~~~~~~-~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~ 85 (211)
..++++|+|+ |.+|...+..+. ..|. +|+++++++.+... ..-+.+ . ..|..+. ++.+..+... .+|.
T Consensus 169 ~g~~VlV~G~-G~vG~~aiqlak-----~~G~~~Vi~~~~~~~~~~~a~~lGa~-~-vi~~~~~-~~~~~~~~~g-~~D~ 238 (343)
T PRK09880 169 QGKRVFVSGV-GPIGCLIVAAVK-----TLGAAEIVCADVSPRSLSLAREMGAD-K-LVNPQND-DLDHYKAEKG-YFDV 238 (343)
T ss_pred CCCEEEEECC-CHHHHHHHHHHH-----HcCCcEEEEEeCCHHHHHHHHHcCCc-E-EecCCcc-cHHHHhccCC-CCCE
Confidence 3578999986 999999998877 6787 58888887654221 112233 2 2344332 2333322212 2788
Q ss_pred EEeeccc
Q 028258 86 LFWVPLQ 92 (211)
Q Consensus 86 v~~~a~~ 92 (211)
+|.+.+.
T Consensus 239 vid~~G~ 245 (343)
T PRK09880 239 SFEVSGH 245 (343)
T ss_pred EEECCCC
Confidence 8887763
|
|
| >PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=91.60 E-value=0.34 Score=40.11 Aligned_cols=34 Identities=15% Similarity=0.058 Sum_probs=30.1
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
++|.|+| +|.+|+.++..|+ ..|++|+++++++.
T Consensus 4 ~kIaViG-aG~mG~~iA~~la-----~~G~~V~l~d~~~~ 37 (287)
T PRK08293 4 KNVTVAG-AGVLGSQIAFQTA-----FHGFDVTIYDISDE 37 (287)
T ss_pred cEEEEEC-CCHHHHHHHHHHH-----hcCCeEEEEeCCHH
Confidence 5789998 6999999999999 68999999998764
|
|
| >cd08293 PTGR2 Prostaglandin reductase | Back alignment and domain information |
|---|
Probab=91.55 E-value=0.28 Score=41.17 Aligned_cols=36 Identities=14% Similarity=0.149 Sum_probs=30.9
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCc-EEEEEeCCCCC
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRPPP 50 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~-~V~~~~R~~~~ 50 (211)
+++||+||+|.+|..+++.+. ..|. +|+++++++++
T Consensus 156 ~~VlI~ga~g~vG~~aiqlAk-----~~G~~~Vi~~~~s~~~ 192 (345)
T cd08293 156 QTMVVSGAAGACGSLAGQIGR-----LLGCSRVVGICGSDEK 192 (345)
T ss_pred CEEEEECCCcHHHHHHHHHHH-----HcCCCEEEEEcCCHHH
Confidence 689999999999999998777 6888 79998887653
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid |
| >TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E | Back alignment and domain information |
|---|
Probab=91.54 E-value=0.31 Score=38.29 Aligned_cols=35 Identities=29% Similarity=0.192 Sum_probs=29.3
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCc-EEEEEeCC
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARR 47 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~-~V~~~~R~ 47 (211)
..+++|+|.| .|.+|+++++.|. ..|. ++++++++
T Consensus 19 l~~~~VlviG-~GglGs~ia~~La-----~~Gv~~i~lvD~d 54 (202)
T TIGR02356 19 LLNSHVLIIG-AGGLGSPAALYLA-----GAGVGTIVIVDDD 54 (202)
T ss_pred hcCCCEEEEC-CCHHHHHHHHHHH-----HcCCCeEEEecCC
Confidence 3567899998 8999999999999 5776 58888875
|
coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli. |
| >PRK13243 glyoxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=91.48 E-value=0.36 Score=41.00 Aligned_cols=36 Identities=25% Similarity=0.210 Sum_probs=32.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
.+|++.|+| .|.||+.+++.|. .-|.+|++.+|.+.
T Consensus 149 ~gktvgIiG-~G~IG~~vA~~l~-----~~G~~V~~~d~~~~ 184 (333)
T PRK13243 149 YGKTIGIIG-FGRIGQAVARRAK-----GFGMRILYYSRTRK 184 (333)
T ss_pred CCCEEEEEC-cCHHHHHHHHHHH-----HCCCEEEEECCCCC
Confidence 578999998 7999999999999 68999999998654
|
|
| >PRK07574 formate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=91.43 E-value=0.39 Score=41.69 Aligned_cols=35 Identities=26% Similarity=0.235 Sum_probs=31.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~ 48 (211)
.+|++.|.| .|-||+.+++.|. .-|.+|++.+|..
T Consensus 191 ~gktVGIvG-~G~IG~~vA~~l~-----~fG~~V~~~dr~~ 225 (385)
T PRK07574 191 EGMTVGIVG-AGRIGLAVLRRLK-----PFDVKLHYTDRHR 225 (385)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHH-----hCCCEEEEECCCC
Confidence 468899998 7999999999999 7899999999875
|
|
| >PRK08163 salicylate hydroxylase; Provisional | Back alignment and domain information |
|---|
Probab=91.38 E-value=0.37 Score=41.43 Aligned_cols=36 Identities=33% Similarity=0.340 Sum_probs=31.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
++.+|+|+| .|-.|..++..|. ..|++|+++.|++.
T Consensus 3 ~~~~V~IvG-aGiaGl~~A~~L~-----~~g~~v~v~Er~~~ 38 (396)
T PRK08163 3 KVTPVLIVG-GGIGGLAAALALA-----RQGIKVKLLEQAAE 38 (396)
T ss_pred CCCeEEEEC-CcHHHHHHHHHHH-----hCCCcEEEEeeCcc
Confidence 457899998 8999999999999 68999999999765
|
|
| >PRK06185 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=91.34 E-value=0.34 Score=41.88 Aligned_cols=40 Identities=18% Similarity=0.181 Sum_probs=33.7
Q ss_pred ccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
|++.+...|+|.| .|..|..++..|. ..|++|+++.+++.
T Consensus 1 ~~~~~~~dV~IvG-gG~~Gl~~A~~La-----~~G~~v~liE~~~~ 40 (407)
T PRK06185 1 MAEVETTDCCIVG-GGPAGMMLGLLLA-----RAGVDVTVLEKHAD 40 (407)
T ss_pred CCccccccEEEEC-CCHHHHHHHHHHH-----hCCCcEEEEecCCc
Confidence 4555667899998 7999999999999 58999999998754
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 211 | ||||
| 2v6f_A | 364 | Structure Of Progesterone 5beta-Reductase From Digi | 2e-31 |
| >pdb|2V6F|A Chain A, Structure Of Progesterone 5beta-Reductase From Digitalis Lanata Length = 364 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 211 | |||
| 2v6g_A | 364 | Progesterone 5-beta-reductase; tyrosine-dependent | 8e-43 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 9e-06 |
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* Length = 364 | Back alignment and structure |
|---|
Score = 146 bits (369), Expect = 8e-43
Identities = 83/197 (42%), Positives = 115/197 (58%), Gaps = 11/197 (5%)
Query: 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDP 69
SVALI+GVTGI G SLAE L TPG PWKVYG ARR P W ++ Y+ D DP
Sbjct: 2 SVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAWHEDNPIN-YVQCDISDP 60
Query: 70 TDTALKLSLISQEITNLFWVPLQVQESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVA 129
D+ KLS + ++T++F+V + +E+ N NS M +NVL ++ + L+H++
Sbjct: 61 DDSQAKLSPL-TDVTHVFYVTWANRSTEQENCEANSKMFRNVLDAVIPNC---PNLKHIS 116
Query: 130 LLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDV---SASYSPAITY 186
L TG KHYMGP G++ ++ P+ ED RL + NFYY+LED+ +T+
Sbjct: 117 LQTGRKHYMGPFESY---GKIESHDPPYTEDLPRLKYMNFYYDLEDIMLEEVEKKEGLTW 173
Query: 187 SVHRSSVIIGASPRSLY 203
SVHR I G SP S+
Sbjct: 174 SVHRPGNIFGFSPYSMM 190
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 44.8 bits (105), Expect = 9e-06
Identities = 30/207 (14%), Positives = 63/207 (30%), Gaps = 52/207 (25%)
Query: 8 PKSVALIIGVTGISGLSL-AEALKNPTTPGSPW--KVYGAARRPPPG-W--FPTALVDRY 61
+ +L++ L E L +P + + R W + D+
Sbjct: 301 DEVKSLLLKYLDCRPQDLPREVLT-----TNPRRLSIIAESIRDGLATWDNWKHVNCDKL 355
Query: 62 IT-----FDALDPTDTA---LKLSL------ISQEITNLFWVPLQVQESEE-VNIFKNST 106
T + L+P + +LS+ I + +L W + + VN +
Sbjct: 356 TTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYS 415
Query: 107 MLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLM-PYEVPFKEDSSRLP 165
+++ + + L + +L ++ Y +P DS L
Sbjct: 416 LVEK------QPKESTISIPSIYLEL-KVKLEN---EYALHRSIVDHYNIPKTFDSDDLI 465
Query: 166 FP---NFYYELEDVSASYSPAITYSVH 189
P ++Y S+ I + H
Sbjct: 466 PPYLDQYFY-------SH---IGH--H 480
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 211 | |||
| 2v6g_A | 364 | Progesterone 5-beta-reductase; tyrosine-dependent | 99.95 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 99.94 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 99.94 | |
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 99.94 | |
| 4egb_A | 346 | DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce | 99.93 | |
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 99.93 | |
| 4id9_A | 347 | Short-chain dehydrogenase/reductase; putative dehy | 99.93 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 99.93 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 99.93 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 99.92 | |
| 2c20_A | 330 | UDP-glucose 4-epimerase; carbohydrate metabolism, | 99.92 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 99.92 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 99.92 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 99.92 | |
| 1ek6_A | 348 | UDP-galactose 4-epimerase; short-chain dehydrogena | 99.92 | |
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 99.92 | |
| 1rpn_A | 335 | GDP-mannose 4,6-dehydratase; short-chain dehydroge | 99.91 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 99.91 | |
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 99.91 | |
| 1t2a_A | 375 | GDP-mannose 4,6 dehydratase; structural genomics c | 99.91 | |
| 3ehe_A | 313 | UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, | 99.91 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 99.91 | |
| 3ay3_A | 267 | NAD-dependent epimerase/dehydratase; glucuronic ac | 99.91 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 99.91 | |
| 3ko8_A | 312 | NAD-dependent epimerase/dehydratase; isomerase, UD | 99.91 | |
| 2hun_A | 336 | 336AA long hypothetical DTDP-glucose 4,6-dehydrat; | 99.91 | |
| 1oc2_A | 348 | DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos | 99.91 | |
| 4b8w_A | 319 | GDP-L-fucose synthase; oxidoreductase; HET: NAP GD | 99.9 | |
| 2p5y_A | 311 | UDP-glucose 4-epimerase; TTHA0591, structural geno | 99.9 | |
| 3sc6_A | 287 | DTDP-4-dehydrorhamnose reductase; RFBD, structural | 99.9 | |
| 2rh8_A | 338 | Anthocyanidin reductase; flavonoids, rossmann fold | 99.9 | |
| 2z1m_A | 345 | GDP-D-mannose dehydratase; short-chain dehydrogena | 99.9 | |
| 1n7h_A | 381 | GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, | 99.9 | |
| 1r6d_A | 337 | TDP-glucose-4,6-dehydratase; rossmann fold, short- | 99.9 | |
| 2ydy_A | 315 | Methionine adenosyltransferase 2 subunit beta; oxi | 99.9 | |
| 1orr_A | 347 | CDP-tyvelose-2-epimerase; rossmann fold, short-cha | 99.9 | |
| 1udb_A | 338 | Epimerase, UDP-galactose-4-epimerase; isomerase; H | 99.9 | |
| 1gy8_A | 397 | UDP-galactose 4-epimerase; oxidoreductase; HET: NA | 99.9 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 99.9 | |
| 2bll_A | 345 | Protein YFBG; decarboxylase, short chain dehydroge | 99.89 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 99.89 | |
| 3ajr_A | 317 | NDP-sugar epimerase; L-threonine dehydrogenase, L- | 99.89 | |
| 3vps_A | 321 | TUNA, NAD-dependent epimerase/dehydratase; tunicam | 99.89 | |
| 2c29_D | 337 | Dihydroflavonol 4-reductase; flavonoids, short deh | 99.89 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 99.89 | |
| 1e6u_A | 321 | GDP-fucose synthetase; epimerase/reductase, SDR, R | 99.89 | |
| 2hrz_A | 342 | AGR_C_4963P, nucleoside-diphosphate-sugar epimeras | 99.89 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 99.89 | |
| 1n2s_A | 299 | DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold | 99.89 | |
| 1db3_A | 372 | GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya | 99.88 | |
| 1vl0_A | 292 | DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s | 99.88 | |
| 1kew_A | 361 | RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo | 99.88 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 99.88 | |
| 2x6t_A | 357 | ADP-L-glycero-D-manno-heptose-6-epimerase; isomera | 99.88 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 99.88 | |
| 1z45_A | 699 | GAL10 bifunctional protein; epimerase, mutarotase, | 99.88 | |
| 2p4h_X | 322 | Vestitone reductase; NADPH-dependent reductase, is | 99.87 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 99.87 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 99.87 | |
| 1z7e_A | 660 | Protein aRNA; rossmann fold, OB-like fold, hydrola | 99.87 | |
| 4f6c_A | 427 | AUSA reductase domain protein; thioester reductase | 99.87 | |
| 2a35_A | 215 | Hypothetical protein PA4017; alpha-beta-alpha sand | 99.87 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 99.87 | |
| 1eq2_A | 310 | ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin | 99.87 | |
| 2b69_A | 343 | UDP-glucuronate decarboxylase 1; UDP-glucoronic ac | 99.86 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 99.86 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 99.86 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 99.86 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 99.86 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 99.86 | |
| 4f6l_B | 508 | AUSA reductase domain protein; thioester reductase | 99.86 | |
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 99.86 | |
| 4b4o_A | 298 | Epimerase family protein SDR39U1; isomerase; HET: | 99.85 | |
| 2ggs_A | 273 | 273AA long hypothetical DTDP-4-dehydrorhamnose red | 99.84 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 99.83 | |
| 3oh8_A | 516 | Nucleoside-diphosphate sugar epimerase (SULA FAMI; | 99.83 | |
| 2wm3_A | 299 | NMRA-like family domain containing protein 1; unkn | 99.83 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 99.83 | |
| 3e48_A | 289 | Putative nucleoside-diphosphate-sugar epimerase; a | 99.82 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 99.81 | |
| 3i6i_A | 346 | Putative leucoanthocyanidin reductase 1; rossmann | 99.81 | |
| 3un1_A | 260 | Probable oxidoreductase; structural genomics, PSI- | 99.8 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 99.77 | |
| 1xgk_A | 352 | Nitrogen metabolite repression regulator NMRA; ros | 99.77 | |
| 1uay_A | 242 | Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid | 99.77 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 99.76 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 99.76 | |
| 3m1a_A | 281 | Putative dehydrogenase; short, PSI, MCSG, structur | 99.76 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 99.75 | |
| 2fwm_X | 250 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e | 99.75 | |
| 2dkn_A | 255 | 3-alpha-hydroxysteroid dehydrogenase; oxidoreducta | 99.75 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 99.75 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 99.75 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 99.75 | |
| 1qyd_A | 313 | Pinoresinol-lariciresinol reductase; NADPH-depende | 99.75 | |
| 3ak4_A | 263 | NADH-dependent quinuclidinone reductase; SDR, (R)- | 99.74 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 99.74 | |
| 1w6u_A | 302 | 2,4-dienoyl-COA reductase, mitochondrial precursor | 99.74 | |
| 1spx_A | 278 | Short-chain reductase family member (5L265); paral | 99.74 | |
| 2dtx_A | 264 | Glucose 1-dehydrogenase related protein; rossmann | 99.74 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 99.74 | |
| 3ai3_A | 263 | NADPH-sorbose reductase; rossmann-fold, NADPH-depe | 99.74 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 99.74 | |
| 4e6p_A | 259 | Probable sorbitol dehydrogenase (L-iditol 2-dehyd; | 99.74 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 99.73 | |
| 1qyc_A | 308 | Phenylcoumaran benzylic ether reductase PT1; NADPH | 99.73 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 99.73 | |
| 2r6j_A | 318 | Eugenol synthase 1; phenylpropene, PIP reductase, | 99.73 | |
| 2ae2_A | 260 | Protein (tropinone reductase-II); oxidoreductase, | 99.73 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 99.73 | |
| 3st7_A | 369 | Capsular polysaccharide synthesis enzyme CAP5F; ro | 99.73 | |
| 3tpc_A | 257 | Short chain alcohol dehydrogenase-related dehydro; | 99.73 | |
| 2yut_A | 207 | Putative short-chain oxidoreductase; alpha and bet | 99.73 | |
| 2pd6_A | 264 | Estradiol 17-beta-dehydrogenase 8; short-chain deh | 99.72 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 99.72 | |
| 2rhc_B | 277 | Actinorhodin polyketide ketoreductase; oxidoreduct | 99.72 | |
| 3afn_B | 258 | Carbonyl reductase; alpha/beta/alpha, rossmann-fol | 99.72 | |
| 1h5q_A | 265 | NADP-dependent mannitol dehydrogenase; oxidoreduct | 99.72 | |
| 3s55_A | 281 | Putative short-chain dehydrogenase/reductase; stru | 99.72 | |
| 2o23_A | 265 | HADH2 protein; HSD17B10, schad, ERAB, type II HADH | 99.72 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 99.72 | |
| 3osu_A | 246 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.72 | |
| 2ehd_A | 234 | Oxidoreductase, oxidoreductase, short-chain dehydr | 99.72 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 99.72 | |
| 2pnf_A | 248 | 3-oxoacyl-[acyl-carrier-protein] reductase; short | 99.72 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 99.71 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 99.71 | |
| 1yxm_A | 303 | Pecra, peroxisomal trans 2-enoyl COA reductase; pe | 99.71 | |
| 2nm0_A | 253 | Probable 3-oxacyl-(acyl-carrier-protein) reductas; | 99.71 | |
| 3d7l_A | 202 | LIN1944 protein; APC89317, structural genomics, PS | 99.71 | |
| 2ew8_A | 249 | (S)-1-phenylethanol dehydrogenase; transferase; 2. | 99.71 | |
| 1ooe_A | 236 | Dihydropteridine reductase; structural genomics, P | 99.71 | |
| 2gdz_A | 267 | NAD+-dependent 15-hydroxyprostaglandin dehydrogen; | 99.71 | |
| 3qiv_A | 253 | Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR | 99.71 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 99.71 | |
| 3v2h_A | 281 | D-beta-hydroxybutyrate dehydrogenase; structural g | 99.71 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 99.71 | |
| 3op4_A | 248 | 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto | 99.71 | |
| 2bd0_A | 244 | Sepiapterin reductase; oxidoreductase; HET: NAP BI | 99.71 | |
| 3uxy_A | 266 | Short-chain dehydrogenase/reductase SDR; structura | 99.7 | |
| 3u9l_A | 324 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.7 | |
| 3i4f_A | 264 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.7 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.7 | |
| 1mxh_A | 276 | Pteridine reductase 2; SDR topology, protein-subst | 99.7 | |
| 3p19_A | 266 | BFPVVD8, putative blue fluorescent protein; rossma | 99.7 | |
| 1hdc_A | 254 | 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi | 99.7 | |
| 3pk0_A | 262 | Short-chain dehydrogenase/reductase SDR; ssgcid, s | 99.7 | |
| 2z1n_A | 260 | Dehydrogenase; reductase, SDR, oxidoreductase; 1.8 | 99.7 | |
| 3ioy_A | 319 | Short-chain dehydrogenase/reductase SDR; structura | 99.7 | |
| 3rkr_A | 262 | Short chain oxidoreductase; rossmann fold; HET: NA | 99.7 | |
| 3ijr_A | 291 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.7 | |
| 1yde_A | 270 | Retinal dehydrogenase/reductase 3; oxidoreductase, | 99.7 | |
| 2a4k_A | 263 | 3-oxoacyl-[acyl carrier protein] reductase; reduct | 99.7 | |
| 2q2v_A | 255 | Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore | 99.7 | |
| 1xg5_A | 279 | ARPG836; short chain dehydrogenase, human, SGC, st | 99.7 | |
| 1iy8_A | 267 | Levodione reductase; oxidoreductase; HET: NAD; 1.6 | 99.7 | |
| 2b4q_A | 276 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier | 99.7 | |
| 1dhr_A | 241 | Dihydropteridine reductase; oxidoreductase(acting | 99.7 | |
| 1hxh_A | 253 | 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b | 99.7 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 99.69 | |
| 1uzm_A | 247 | 3-oxoacyl-[acyl-carrier protein] reductase; beta-k | 99.69 | |
| 3o38_A | 266 | Short chain dehydrogenase; tuberculosis, ortholog | 99.69 | |
| 1xkq_A | 280 | Short-chain reductase family member (5D234); parra | 99.69 | |
| 3tjr_A | 301 | Short chain dehydrogenase; structural genomics, se | 99.69 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.69 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 99.69 | |
| 1x1t_A | 260 | D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S | 99.69 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 99.69 | |
| 2hq1_A | 247 | Glucose/ribitol dehydrogenase; CTH-1438, structura | 99.69 | |
| 4da9_A | 280 | Short-chain dehydrogenase/reductase; structural ge | 99.69 | |
| 1geg_A | 256 | Acetoin reductase; SDR family, oxidoreductase; HET | 99.69 | |
| 3c1o_A | 321 | Eugenol synthase; phenylpropene, PIP reductase, sh | 99.69 | |
| 3v8b_A | 283 | Putative dehydrogenase, possibly 3-oxoacyl-[acyl- | 99.69 | |
| 4egf_A | 266 | L-xylulose reductase; structural genomics, ssgcid, | 99.69 | |
| 3pgx_A | 280 | Carveol dehydrogenase; structural genomics, seattl | 99.68 | |
| 1wma_A | 276 | Carbonyl reductase [NADPH] 1; oxidoreductase; HET: | 99.68 | |
| 1qsg_A | 265 | Enoyl-[acyl-carrier-protein] reductase; enoyl redu | 99.68 | |
| 2ph3_A | 245 | 3-oxoacyl-[acyl carrier protein] reductase; TTHA04 | 99.68 | |
| 1ja9_A | 274 | 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p | 99.68 | |
| 2c07_A | 285 | 3-oxoacyl-(acyl-carrier protein) reductase; oxidor | 99.68 | |
| 3uf0_A | 273 | Short-chain dehydrogenase/reductase SDR; gluconate | 99.68 | |
| 3l6e_A | 235 | Oxidoreductase, short-chain dehydrogenase/reducta; | 99.68 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 99.68 | |
| 3orf_A | 251 | Dihydropteridine reductase; alpha-beta-alpha sandw | 99.68 | |
| 4e4y_A | 244 | Short chain dehydrogenase family protein; structur | 99.68 | |
| 3k31_A | 296 | Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI | 99.68 | |
| 1edo_A | 244 | Beta-keto acyl carrier protein reductase; nucleoti | 99.68 | |
| 1uls_A | 245 | Putative 3-oxoacyl-acyl carrier protein reductase; | 99.68 | |
| 4dyv_A | 272 | Short-chain dehydrogenase/reductase SDR; structura | 99.68 | |
| 3oid_A | 258 | Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa | 99.68 | |
| 3oec_A | 317 | Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; | 99.68 | |
| 1sby_A | 254 | Alcohol dehydrogenase; ternary complex, NAD, trifl | 99.68 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 99.68 | |
| 3grp_A | 266 | 3-oxoacyl-(acyl carrierprotein) reductase; structu | 99.68 | |
| 3imf_A | 257 | Short chain dehydrogenase; structural genomics, in | 99.68 | |
| 1vl8_A | 267 | Gluconate 5-dehydrogenase; TM0441, structural geno | 99.67 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 99.67 | |
| 3r1i_A | 276 | Short-chain type dehydrogenase/reductase; structur | 99.67 | |
| 1xhl_A | 297 | Short-chain dehydrogenase/reductase family member | 99.67 | |
| 3sc4_A | 285 | Short chain dehydrogenase (A0QTM2 homolog); ssgcid | 99.67 | |
| 3cxt_A | 291 | Dehydrogenase with different specificities; rossma | 99.67 | |
| 2pd4_A | 275 | Enoyl-[acyl-carrier-protein] reductase [NADH]; ant | 99.67 | |
| 2uvd_A | 246 | 3-oxoacyl-(acyl-carrier-protein) reductase; beta-k | 99.67 | |
| 3guy_A | 230 | Short-chain dehydrogenase/reductase SDR; structura | 99.67 | |
| 3f9i_A | 249 | 3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto | 99.67 | |
| 2p91_A | 285 | Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD | 99.67 | |
| 1g0o_A | 283 | Trihydroxynaphthalene reductase; protein-NADPH-act | 99.67 | |
| 3kvo_A | 346 | Hydroxysteroid dehydrogenase-like protein 2; HSDL2 | 99.67 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 99.67 | |
| 3lf2_A | 265 | Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross | 99.67 | |
| 1yb1_A | 272 | 17-beta-hydroxysteroid dehydrogenase type XI; shor | 99.67 | |
| 3dii_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.67 | |
| 3ctm_A | 279 | Carbonyl reductase; alcohol dehydrogenase, short-c | 99.67 | |
| 2ekp_A | 239 | 2-deoxy-D-gluconate 3-dehydrogenase; structural ge | 99.67 | |
| 3gaf_A | 256 | 7-alpha-hydroxysteroid dehydrogenase; seattle stru | 99.66 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 99.66 | |
| 3ucx_A | 264 | Short chain dehydrogenase; ssgcid, seattle structu | 99.66 | |
| 3gvc_A | 277 | Oxidoreductase, probable short-chain type dehydrog | 99.66 | |
| 3gk3_A | 269 | Acetoacetyl-COA reductase; acetoacetyl-CO reductas | 99.66 | |
| 2jah_A | 247 | Clavulanic acid dehydrogenase; short-chain dehydro | 99.66 | |
| 4fc7_A | 277 | Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman | 99.66 | |
| 3r3s_A | 294 | Oxidoreductase; structural genomics, csgid, center | 99.66 | |
| 3h7a_A | 252 | Short chain dehydrogenase; oxidoreductase, PSI-2, | 99.66 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 99.66 | |
| 3a28_C | 258 | L-2.3-butanediol dehydrogenase; chiral substrate r | 99.65 | |
| 3tfo_A | 264 | Putative 3-oxoacyl-(acyl-carrier-protein) reducta; | 99.65 | |
| 3rwb_A | 247 | TPLDH, pyridoxal 4-dehydrogenase; short chain dehy | 99.65 | |
| 3v2g_A | 271 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.65 | |
| 3t4x_A | 267 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.65 | |
| 3tl3_A | 257 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.65 | |
| 4iiu_A | 267 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.65 | |
| 2wyu_A | 261 | Enoyl-[acyl carrier protein] reductase; oxidoreduc | 99.65 | |
| 3lyl_A | 247 | 3-oxoacyl-(acyl-carrier-protein) reductase; alpha | 99.65 | |
| 3ksu_A | 262 | 3-oxoacyl-acyl carrier protein reductase; structur | 99.65 | |
| 4ibo_A | 271 | Gluconate dehydrogenase; enzyme function initiativ | 99.65 | |
| 4e3z_A | 272 | Putative oxidoreductase protein; PSI-biology, stru | 99.65 | |
| 4dmm_A | 269 | 3-oxoacyl-[acyl-carrier-protein] reductase; rossma | 99.65 | |
| 3uce_A | 223 | Dehydrogenase; rossmann fold, oxidoreductase; HET: | 99.64 | |
| 1zem_A | 262 | Xylitol dehydrogenase; rossmann fold, dinucleotide | 99.64 | |
| 3is3_A | 270 | 17BETA-hydroxysteroid dehydrogenase; short chain d | 99.64 | |
| 3nrc_A | 280 | Enoyl-[acyl-carrier-protein] reductase (NADH); ros | 99.64 | |
| 1fjh_A | 257 | 3alpha-hydroxysteroid dehydrogenase/carbonyl reduc | 99.64 | |
| 3asu_A | 248 | Short-chain dehydrogenase/reductase SDR; SDR famil | 99.63 | |
| 3oig_A | 266 | Enoyl-[acyl-carrier-protein] reductase [NADH]; fat | 99.63 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 99.63 | |
| 3o26_A | 311 | Salutaridine reductase; short chain dehydrogenase/ | 99.63 | |
| 3nyw_A | 250 | Putative oxidoreductase; fatty acid synthesis,3-ox | 99.63 | |
| 2h7i_A | 269 | Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi | 99.63 | |
| 3ezl_A | 256 | Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA | 99.63 | |
| 1o5i_A | 249 | 3-oxoacyl-(acyl carrier protein) reductase; TM1169 | 99.63 | |
| 3uve_A | 286 | Carveol dehydrogenase ((+)-trans-carveol dehydrog; | 99.63 | |
| 2x9g_A | 288 | PTR1, pteridine reductase; short chain dehydrogena | 99.62 | |
| 3ppi_A | 281 | 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de | 99.62 | |
| 3e03_A | 274 | Short chain dehydrogenase; structural genomics, PS | 99.62 | |
| 3u5t_A | 267 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.62 | |
| 4imr_A | 275 | 3-oxoacyl-(acyl-carrier-protein) reductase; oxidor | 99.62 | |
| 3grk_A | 293 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.62 | |
| 2nwq_A | 272 | Probable short-chain dehydrogenase; oxidoreductase | 99.62 | |
| 3tsc_A | 277 | Putative oxidoreductase; structural genomics, seat | 99.62 | |
| 3ftp_A | 270 | 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid | 99.61 | |
| 4iin_A | 271 | 3-ketoacyl-acyl carrier protein reductase (FABG); | 99.61 | |
| 1e7w_A | 291 | Pteridine reductase; dihydrofolate reductase, shor | 99.61 | |
| 3t7c_A | 299 | Carveol dehydrogenase; structural genomics, seattl | 99.61 | |
| 3l77_A | 235 | Short-chain alcohol dehydrogenase; oxidoreductase; | 99.61 | |
| 4b79_A | 242 | PA4098, probable short-chain dehydrogenase; oxidor | 99.61 | |
| 3edm_A | 259 | Short chain dehydrogenase; structural genomics, ox | 99.61 | |
| 3kzv_A | 254 | Uncharacterized oxidoreductase YIR035C; cytoplasmi | 99.61 | |
| 2qhx_A | 328 | Pteridine reductase 1; oxidoreductase, short-chain | 99.61 | |
| 2qq5_A | 260 | DHRS1, dehydrogenase/reductase SDR family member 1 | 99.6 | |
| 3i1j_A | 247 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.6 | |
| 3ek2_A | 271 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.6 | |
| 3icc_A | 255 | Putative 3-oxoacyl-(acyl carrier protein) reducta; | 99.6 | |
| 3rku_A | 287 | Oxidoreductase YMR226C; substrate fingerprint, sho | 99.6 | |
| 1jtv_A | 327 | 17 beta-hydroxysteroid dehydrogenase type 1; stero | 99.59 | |
| 1xu9_A | 286 | Corticosteroid 11-beta-dehydrogenase, isozyme 1; h | 99.59 | |
| 1oaa_A | 259 | Sepiapterin reductase; tetrahydrobiopterin, oxidor | 99.59 | |
| 4dry_A | 281 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.58 | |
| 3f1l_A | 252 | Uncharacterized oxidoreductase YCIK; E. coli, NADP | 99.58 | |
| 2fr1_A | 486 | Erythromycin synthase, eryai; short chain dehydrog | 99.57 | |
| 3zv4_A | 281 | CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox | 99.57 | |
| 3ged_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.57 | |
| 1y7t_A | 327 | Malate dehydrogenase; NAD-dependent-MDH-NADPH comp | 99.56 | |
| 4h15_A | 261 | Short chain alcohol dehydrogenase-related dehydro; | 99.56 | |
| 3qlj_A | 322 | Short chain dehydrogenase; structural genomics, se | 99.55 | |
| 3e9n_A | 245 | Putative short-chain dehydrogenase/reductase; stru | 99.54 | |
| 3gdg_A | 267 | Probable NADP-dependent mannitol dehydrogenase; ro | 99.53 | |
| 4g81_D | 255 | Putative hexonate dehydrogenase; enzyme function i | 99.53 | |
| 3mje_A | 496 | AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1. | 99.52 | |
| 2z5l_A | 511 | Tylkr1, tylactone synthase starter module and modu | 99.52 | |
| 4fgs_A | 273 | Probable dehydrogenase protein; PSI-biology, nysgr | 99.51 | |
| 1zmt_A | 254 | Haloalcohol dehalogenase HHEC; halohydrin dehaloge | 99.49 | |
| 4gkb_A | 258 | 3-oxoacyl-[acyl-carrier protein] reductase; putati | 99.48 | |
| 4fn4_A | 254 | Short chain dehydrogenase; NADH-binding, rossmann | 99.47 | |
| 4fs3_A | 256 | Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; | 99.46 | |
| 3qp9_A | 525 | Type I polyketide synthase pikaii; rossmann fold, | 99.45 | |
| 1gz6_A | 319 | Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF | 99.45 | |
| 4hp8_A | 247 | 2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi | 99.44 | |
| 3u0b_A | 454 | Oxidoreductase, short chain dehydrogenase/reducta | 99.43 | |
| 1zmo_A | 244 | Halohydrin dehalogenase; haloalcohol dehalogenase, | 99.36 | |
| 2o2s_A | 315 | Enoyl-acyl carrier reductase; enoyl reductase, tri | 99.23 | |
| 1d7o_A | 297 | Enoyl-[acyl-carrier protein] reductase (NADH) PRE; | 99.23 | |
| 3oml_A | 613 | GH14720P, peroxisomal multifunctional enzyme type | 99.2 | |
| 3lt0_A | 329 | Enoyl-ACP reductase; triclosan, triclosan variant, | 99.18 | |
| 2ptg_A | 319 | Enoyl-acyl carrier reductase; apicomplexa, enoyl ( | 99.16 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 99.14 | |
| 3ic5_A | 118 | Putative saccharopine dehydrogenase; structural ge | 99.08 | |
| 3zu3_A | 405 | Putative reductase YPO4104/Y4119/YP_4011; oxidored | 99.02 | |
| 2pff_A | 1688 | Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl | 98.99 | |
| 2uv8_A | 1887 | Fatty acid synthase subunit alpha (FAS2); fatty ac | 98.97 | |
| 3s8m_A | 422 | Enoyl-ACP reductase; rossmann fold, oxidoreductase | 98.96 | |
| 4eue_A | 418 | Putative reductase CA_C0462; TER, biofuel, synthet | 98.95 | |
| 2uv9_A | 1878 | Fatty acid synthase alpha subunits; fungal, dehydr | 98.93 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 98.86 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 98.85 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 98.84 | |
| 1b8p_A | 329 | Protein (malate dehydrogenase); oxidoreductase; 1. | 98.68 | |
| 1lu9_A | 287 | Methylene tetrahydromethanopterin dehydrogenase; a | 98.62 | |
| 1smk_A | 326 | Malate dehydrogenase, glyoxysomal; tricarboxylic c | 98.62 | |
| 1ff9_A | 450 | Saccharopine reductase; lysine biosynthesis, alpha | 98.58 | |
| 2hmt_A | 144 | YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane | 98.56 | |
| 3zen_D | 3089 | Fatty acid synthase; transferase, mycolic acid bio | 98.53 | |
| 3llv_A | 141 | Exopolyphosphatase-related protein; NAD(P)-binding | 98.53 | |
| 2gk4_A | 232 | Conserved hypothetical protein; alpha-beta-alpha s | 98.46 | |
| 1hye_A | 313 | L-lactate/malate dehydrogenase; nucleotide binding | 98.41 | |
| 1u7z_A | 226 | Coenzyme A biosynthesis bifunctional protein coabc | 98.41 | |
| 3abi_A | 365 | Putative uncharacterized protein PH1688; L-lysine | 98.33 | |
| 1o6z_A | 303 | MDH, malate dehydrogenase; halophilic, ION-binding | 98.29 | |
| 4ggo_A | 401 | Trans-2-enoyl-COA reductase; rossmann fold, oxidor | 98.25 | |
| 4ina_A | 405 | Saccharopine dehydrogenase; structural genomics, P | 98.23 | |
| 1id1_A | 153 | Putative potassium channel protein; RCK domain, E. | 98.23 | |
| 2axq_A | 467 | Saccharopine dehydrogenase; rossmann fold variant, | 98.05 | |
| 2g1u_A | 155 | Hypothetical protein TM1088A; structural genomics, | 98.04 | |
| 1lss_A | 140 | TRK system potassium uptake protein TRKA homolog; | 97.93 | |
| 3fwz_A | 140 | Inner membrane protein YBAL; TRKA-N domain, E.coli | 97.91 | |
| 1mld_A | 314 | Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D | 97.89 | |
| 5mdh_A | 333 | Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH | 97.87 | |
| 1pqw_A | 198 | Polyketide synthase; rossmann fold, dimer, structu | 97.77 | |
| 2aef_A | 234 | Calcium-gated potassium channel MTHK; rossmann fol | 97.71 | |
| 2z2v_A | 365 | Hypothetical protein PH1688; L-lysine dehydrogenas | 97.69 | |
| 3c85_A | 183 | Putative glutathione-regulated potassium-efflux S | 97.67 | |
| 3fi9_A | 343 | Malate dehydrogenase; structural genomics, oxidore | 97.65 | |
| 1v3u_A | 333 | Leukotriene B4 12- hydroxydehydrogenase/prostaglan | 97.51 | |
| 2hcy_A | 347 | Alcohol dehydrogenase 1; tetramer of asymmetric di | 97.51 | |
| 3l4b_C | 218 | TRKA K+ channel protien TM1088B; potassium channel | 97.46 | |
| 2eez_A | 369 | Alanine dehydrogenase; TTHA0216, structural genomi | 97.35 | |
| 4b7c_A | 336 | Probable oxidoreductase; NADP cofactor, rossmann f | 97.31 | |
| 1yb5_A | 351 | Quinone oxidoreductase; medium-chain dehydrogenase | 97.28 | |
| 3pqe_A | 326 | L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas | 97.26 | |
| 1qor_A | 327 | Quinone oxidoreductase; HET: NAP; 2.20A {Escherich | 97.25 | |
| 2zb4_A | 357 | Prostaglandin reductase 2; rossmann fold, alternat | 97.2 | |
| 2j3h_A | 345 | NADP-dependent oxidoreductase P1; double bond redu | 97.14 | |
| 1ys4_A | 354 | Aspartate-semialdehyde dehydrogenase; oxidoreducta | 97.14 | |
| 3tl2_A | 315 | Malate dehydrogenase; center for structural genomi | 97.12 | |
| 1wly_A | 333 | CAAR, 2-haloacrylate reductase; NADPH-dependent ox | 97.11 | |
| 2j8z_A | 354 | Quinone oxidoreductase; medium-chain dehydrogenase | 97.11 | |
| 4h7p_A | 345 | Malate dehydrogenase; ssgcid, structural G seattle | 97.08 | |
| 3vku_A | 326 | L-LDH, L-lactate dehydrogenase; rossmann fold, NAD | 97.07 | |
| 3l9w_A | 413 | Glutathione-regulated potassium-efflux system Pro | 97.06 | |
| 1pzg_A | 331 | LDH, lactate dehydrogenase; apicomplexa, APAD, tet | 97.01 | |
| 3tnl_A | 315 | Shikimate dehydrogenase; structural genomics, cent | 96.93 | |
| 3orq_A | 377 | N5-carboxyaminoimidazole ribonucleotide synthetas; | 96.92 | |
| 3q2o_A | 389 | Phosphoribosylaminoimidazole carboxylase, ATPase; | 96.91 | |
| 1jay_A | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma | 96.9 | |
| 2nqt_A | 352 | N-acetyl-gamma-glutamyl-phosphate reductase; apopr | 96.84 | |
| 4f3y_A | 272 | DHPR, dihydrodipicolinate reductase; structural ge | 96.81 | |
| 4dup_A | 353 | Quinone oxidoreductase; PSI-biology, structural ge | 96.8 | |
| 1y6j_A | 318 | L-lactate dehydrogenase; southeast collaboratory f | 96.77 | |
| 1xyg_A | 359 | Putative N-acetyl-gamma-glutamyl-phosphate reduct; | 96.76 | |
| 1jvb_A | 347 | NAD(H)-dependent alcohol dehydrogenase; archaeon, | 96.76 | |
| 3qwb_A | 334 | Probable quinone oxidoreductase; rossmann fold, qu | 96.75 | |
| 2ozp_A | 345 | N-acetyl-gamma-glutamyl-phosphate reductase; amino | 96.75 | |
| 2eih_A | 343 | Alcohol dehydrogenase; zinc ION binding protein, s | 96.75 | |
| 1lnq_A | 336 | MTHK channels, potassium channel related protein; | 96.74 | |
| 1kjq_A | 391 | GART 2, phosphoribosylglycinamide formyltransferas | 96.72 | |
| 3d0o_A | 317 | L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly | 96.72 | |
| 1dih_A | 273 | Dihydrodipicolinate reductase; oxidoreductase; HET | 96.72 | |
| 3gms_A | 340 | Putative NADPH:quinone reductase; structural genom | 96.71 | |
| 2hjs_A | 340 | USG-1 protein homolog; aspartate-semialdehyde dehy | 96.64 | |
| 2c0c_A | 362 | Zinc binding alcohol dehydrogenase, domain contain | 96.63 | |
| 3hhp_A | 312 | Malate dehydrogenase; MDH, citric acid cycle, TCA | 96.63 | |
| 3gvi_A | 324 | Malate dehydrogenase; NAD, oxidoreductase, tricarb | 96.62 | |
| 4aj2_A | 331 | L-lactate dehydrogenase A chain; oxidoreductase-in | 96.62 | |
| 3p7m_A | 321 | Malate dehydrogenase; putative dehydrogenase, enzy | 96.61 | |
| 3jyn_A | 325 | Quinone oxidoreductase; rossmann fold, protein-NAD | 96.6 | |
| 3k5i_A | 403 | Phosphoribosyl-aminoimidazole carboxylase; purine | 96.58 | |
| 4eye_A | 342 | Probable oxidoreductase; structural genomics, niai | 96.56 | |
| 3don_A | 277 | Shikimate dehydrogenase; alpha-beta structure, ros | 96.56 | |
| 1ldn_A | 316 | L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA | 96.55 | |
| 3c24_A | 286 | Putative oxidoreductase; YP_511008.1, structural g | 96.55 | |
| 1iz0_A | 302 | Quinone oxidoreductase; APO-enzyme, riken structur | 96.53 | |
| 3ijp_A | 288 | DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, | 96.52 | |
| 4dpk_A | 359 | Malonyl-COA/succinyl-COA reductase; dinucleotide b | 96.42 | |
| 4dpl_A | 359 | Malonyl-COA/succinyl-COA reductase; dinucleotide b | 96.42 | |
| 3qha_A | 296 | Putative oxidoreductase; seattle structural genomi | 96.39 | |
| 1pjc_A | 361 | Protein (L-alanine dehydrogenase); oxidoreductase, | 96.39 | |
| 4e4t_A | 419 | Phosphoribosylaminoimidazole carboxylase, ATPase; | 96.38 | |
| 3pwk_A | 366 | Aspartate-semialdehyde dehydrogenase; NADP binding | 96.28 | |
| 2vhw_A | 377 | Alanine dehydrogenase; NAD, secreted, oxidoreducta | 96.28 | |
| 1ur5_A | 309 | Malate dehydrogenase; oxidoreductase, tricarboxyli | 96.23 | |
| 3qy9_A | 243 | DHPR, dihydrodipicolinate reductase; rossmann fold | 96.17 | |
| 3ldh_A | 330 | Lactate dehydrogenase; oxidoreductase, CHOH donor, | 96.16 | |
| 3nep_X | 314 | Malate dehydrogenase; halophIle, molecular adpatat | 96.12 | |
| 3t4e_A | 312 | Quinate/shikimate dehydrogenase; structural genomi | 96.05 | |
| 4g65_A | 461 | TRK system potassium uptake protein TRKA; structur | 96.02 | |
| 2ep5_A | 350 | 350AA long hypothetical aspartate-semialdehyde deh | 96.01 | |
| 2zqz_A | 326 | L-LDH, L-lactate dehydrogenase; oxidoreductase, ro | 95.97 | |
| 2pv7_A | 298 | T-protein [includes: chorismate mutase (EC 5.4.99 | 95.97 | |
| 1p9o_A | 313 | Phosphopantothenoylcysteine synthetase; ligase; 2. | 95.95 | |
| 3pi7_A | 349 | NADH oxidoreductase; groes-like fold, NAD(P)-bindi | 95.95 | |
| 2vn8_A | 375 | Reticulon-4-interacting protein 1; mitochondrion, | 95.9 | |
| 1yqd_A | 366 | Sinapyl alcohol dehydrogenase; lignin, monolignol, | 95.9 | |
| 1nyt_A | 271 | Shikimate 5-dehydrogenase; alpha/beta domains, WID | 95.89 | |
| 2cdc_A | 366 | Glucose dehydrogenase glucose 1-dehydrogenase, DHG | 95.86 | |
| 3ax6_A | 380 | Phosphoribosylaminoimidazole carboxylase, ATPase; | 95.79 | |
| 1ez4_A | 318 | Lactate dehydrogenase; rossmann fold, oxidoreducta | 95.78 | |
| 1rjw_A | 339 | ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD | 95.77 | |
| 3ggo_A | 314 | Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b | 95.71 | |
| 2vns_A | 215 | Metalloreductase steap3; metal-binding, transmembr | 95.7 | |
| 4dim_A | 403 | Phosphoribosylglycinamide synthetase; structural g | 95.68 | |
| 1oju_A | 294 | MDH, malate dehydrogenase; hyperthermophilic, oxid | 95.66 | |
| 2dwc_A | 433 | PH0318, 433AA long hypothetical phosphoribosylglyc | 95.64 | |
| 3dr3_A | 337 | N-acetyl-gamma-glutamyl-phosphate reductase; csgid | 95.62 | |
| 3gxh_A | 157 | Putative phosphatase (DUF442); YP_001181608.1, str | 95.61 | |
| 3hsk_A | 381 | Aspartate-semialdehyde dehydrogenase; candida albi | 95.6 | |
| 2dq4_A | 343 | L-threonine 3-dehydrogenase; NAD-dependent, oxidor | 95.6 | |
| 1bg6_A | 359 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L | 95.5 | |
| 2x0j_A | 294 | Malate dehydrogenase; oxidoreductase, hyperthermop | 95.49 | |
| 3ouz_A | 446 | Biotin carboxylase; structural genomics, center fo | 95.48 | |
| 3oj0_A | 144 | Glutr, glutamyl-tRNA reductase; structural genomic | 95.48 | |
| 2dzd_A | 461 | Pyruvate carboxylase; biotin carboxylase, ligase; | 95.48 | |
| 3gaz_A | 343 | Alcohol dehydrogenase superfamily protein; oxidore | 95.46 | |
| 4ffl_A | 363 | PYLC; amino acid, biosynthesis of pyrrolysine, iso | 95.46 | |
| 3krt_A | 456 | Crotonyl COA reductase; structural genomics, prote | 95.44 | |
| 3pp8_A | 315 | Glyoxylate/hydroxypyruvate reductase A; structural | 95.37 | |
| 4e12_A | 283 | Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1 | 95.34 | |
| 1nvt_A | 287 | Shikimate 5'-dehydrogenase; structural genomics, P | 95.33 | |
| 3gqv_A | 371 | Enoyl reductase; medium-chain reductase (MDR super | 95.31 | |
| 2r00_A | 336 | Aspartate-semialdehyde dehydrogenase; conformation | 95.31 | |
| 4gbj_A | 297 | 6-phosphogluconate dehydrogenase NAD-binding; stru | 95.3 | |
| 1t4b_A | 367 | Aspartate-semialdehyde dehydrogenase; asadh, HOSR, | 95.3 | |
| 1p9l_A | 245 | Dihydrodipicolinate reductase; oxidoreductase, lys | 95.28 | |
| 3lk7_A | 451 | UDP-N-acetylmuramoylalanine--D-glutamate ligase; a | 95.26 | |
| 3phh_A | 269 | Shikimate dehydrogenase; shikimate pathway, helico | 95.26 | |
| 1p77_A | 272 | Shikimate 5-dehydrogenase; NADPH, oxidoreductase; | 95.22 | |
| 2ew2_A | 316 | 2-dehydropantoate 2-reductase, putative; alpha-str | 95.21 | |
| 2hjr_A | 328 | Malate dehydrogenase; malaria, structural genomics | 95.2 | |
| 1edz_A | 320 | 5,10-methylenetetrahydrofolate dehydrogenase; nucl | 95.19 | |
| 4huj_A | 220 | Uncharacterized protein; PSI-biology, nysgrc, stru | 95.09 | |
| 4dll_A | 320 | 2-hydroxy-3-oxopropionate reductase; structural ge | 95.08 | |
| 2dpo_A | 319 | L-gulonate 3-dehydrogenase; structural genomics, N | 95.06 | |
| 2d8a_A | 348 | PH0655, probable L-threonine 3-dehydrogenase; pyro | 95.05 | |
| 7mdh_A | 375 | Protein (malate dehydrogenase); chloroplastic mala | 95.05 | |
| 2o3j_A | 481 | UDP-glucose 6-dehydrogenase; structural genomics, | 95.04 | |
| 4gx0_A | 565 | TRKA domain protein; membrane protein, ION channel | 94.94 | |
| 2v6b_A | 304 | L-LDH, L-lactate dehydrogenase; oxidoreductase, ra | 94.94 | |
| 4ezb_A | 317 | Uncharacterized conserved protein; structural geno | 94.92 | |
| 1f0y_A | 302 | HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive | 94.9 | |
| 3uw3_A | 377 | Aspartate-semialdehyde dehydrogenase; structural g | 94.89 | |
| 3o8q_A | 281 | Shikimate 5-dehydrogenase I alpha; structural geno | 94.85 | |
| 3l6d_A | 306 | Putative oxidoreductase; structural genomics, prot | 94.81 | |
| 2ph5_A | 480 | Homospermidine synthase; alpha-beta protein, struc | 94.8 | |
| 3jyo_A | 283 | Quinate/shikimate dehydrogenase; enzyme-cofactor c | 94.78 | |
| 2b5w_A | 357 | Glucose dehydrogenase; nucleotide binding motif, o | 94.77 | |
| 3u62_A | 253 | Shikimate dehydrogenase; shikimate pathway, oxidor | 94.76 | |
| 2w70_A | 449 | Biotin carboxylase; ligase, ATP-binding, fatty aci | 94.75 | |
| 3dtt_A | 245 | NADP oxidoreductase; structural genomics, joint ce | 94.71 | |
| 3pzr_A | 370 | Aspartate-semialdehyde dehydrogenase; NADP, oxidor | 94.7 | |
| 2o7s_A | 523 | DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat | 94.69 | |
| 1e3j_A | 352 | NADP(H)-dependent ketose reductase; oxidoreductase | 94.66 | |
| 3qsg_A | 312 | NAD-binding phosphogluconate dehydrogenase-like P; | 94.63 | |
| 3i83_A | 320 | 2-dehydropantoate 2-reductase; structural genomics | 94.61 | |
| 3doj_A | 310 | AT3G25530, dehydrogenase-like protein; gamma-hydro | 94.6 | |
| 2egg_A | 297 | AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff | 94.56 | |
| 2raf_A | 209 | Putative dinucleotide-binding oxidoreductase; NP_7 | 94.56 | |
| 1tt7_A | 330 | YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st | 94.55 | |
| 1xa0_A | 328 | Putative NADPH dependent oxidoreductases; structur | 94.54 | |
| 3uog_A | 363 | Alcohol dehydrogenase; structural genomics, protei | 94.54 | |
| 1ks9_A | 291 | KPA reductase;, 2-dehydropantoate 2-reductase; PAN | 94.53 | |
| 2qk4_A | 452 | Trifunctional purine biosynthetic protein adenosi; | 94.48 | |
| 3g0o_A | 303 | 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine | 94.45 | |
| 1uuf_A | 369 | YAHK, zinc-type alcohol dehydrogenase-like protein | 94.45 | |
| 2xdo_A | 398 | TETX2 protein; tetracycline degradation, tigecycli | 94.43 | |
| 3s2e_A | 340 | Zinc-containing alcohol dehydrogenase superfamily; | 94.43 | |
| 4gx0_A | 565 | TRKA domain protein; membrane protein, ION channel | 94.41 | |
| 3evt_A | 324 | Phosphoglycerate dehydrogenase; structural genomic | 94.4 | |
| 1h2b_A | 359 | Alcohol dehydrogenase; oxidoreductase, archaea, hy | 94.36 | |
| 2ewd_A | 317 | Lactate dehydrogenase,; protein-substrate_cofactor | 94.28 | |
| 3gg2_A | 450 | Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd | 94.28 | |
| 2cf5_A | 357 | Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign | 94.25 | |
| 3m6i_A | 363 | L-arabinitol 4-dehydrogenase; medium chain dehydro | 94.21 | |
| 2izz_A | 322 | Pyrroline-5-carboxylate reductase 1; amino-acid bi | 94.2 | |
| 4e21_A | 358 | 6-phosphogluconate dehydrogenase (decarboxylating; | 94.2 | |
| 3pwz_A | 272 | Shikimate dehydrogenase 3; alpha-beta, oxidoreduct | 94.19 | |
| 3hg7_A | 324 | D-isomer specific 2-hydroxyacid dehydrogenase FAM | 94.13 | |
| 2xxj_A | 310 | L-LDH, L-lactate dehydrogenase; oxidoreductase, hy | 94.12 | |
| 2uyy_A | 316 | N-PAC protein; long-chain dehydrogenase, cytokine; | 94.07 | |
| 3k96_A | 356 | Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA | 94.06 | |
| 3cky_A | 301 | 2-hydroxymethyl glutarate dehydrogenase; rossmann | 94.06 | |
| 4a0s_A | 447 | Octenoyl-COA reductase/carboxylase; oxidoreductase | 94.02 | |
| 3pef_A | 287 | 6-phosphogluconate dehydrogenase, NAD-binding; gam | 94.0 |
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=2.8e-26 Score=193.28 Aligned_cols=173 Identities=40% Similarity=0.678 Sum_probs=138.1
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCC-----cEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccc
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSP-----WKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEIT 84 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g-----~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~ 84 (211)
++|||||||||||++|+++|+ ++| ++|++++|++........+++ ++.+|++|++++.+++++... +|
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~-----~~g~~~~~~~V~~~~r~~~~~~~~~~~~~-~~~~Dl~d~~~~~~~~~~~~~-~d 74 (364)
T 2v6g_A 2 SVALIVGVTGIIGNSLAEILP-----LADTPGGPWKVYGVARRTRPAWHEDNPIN-YVQCDISDPDDSQAKLSPLTD-VT 74 (364)
T ss_dssp EEEEEETTTSHHHHHHHHHTT-----STTCTTCSEEEEEEESSCCCSCCCSSCCE-EEECCTTSHHHHHHHHTTCTT-CC
T ss_pred CEEEEECCCcHHHHHHHHHHH-----hCCCCCCceEEEEEeCCCCccccccCceE-EEEeecCCHHHHHHHHhcCCC-CC
Confidence 579999999999999999999 678 999999998765433346789 999999999999999987643 79
Q ss_pred eEEeecccCCchhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEE-------EeecCeeeecccCCccccCCCCCCCCCC
Q 028258 85 NLFWVPLQVQESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVA-------LLTGTKHYMGPIFDPSLAGQLMPYEVPF 157 (211)
Q Consensus 85 ~v~~~a~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~-------~~s~~~~y~~~~~~~~~~g~~~~~~~~~ 157 (211)
+|||+|+....++...+++|+.++.++++++.+. .+++++|+ ++||..+|+... ....|+
T Consensus 75 ~vih~a~~~~~~~~~~~~~n~~~~~~l~~a~~~~---~~~~~~~v~~~g~~i~~Ss~~vyg~~~----------~~~~~~ 141 (364)
T 2v6g_A 75 HVFYVTWANRSTEQENCEANSKMFRNVLDAVIPN---CPNLKHISLQTGRKHYMGPFESYGKIE----------SHDPPY 141 (364)
T ss_dssp EEEECCCCCCSSHHHHHHHHHHHHHHHHHHHTTT---CTTCCEEEEECCTHHHHCCGGGTTTSC----------CCCSSB
T ss_pred EEEECCCCCcchHHHHHHHhHHHHHHHHHHHHHh---ccccceEEeccCceEEEechhhccccc----------cCCCCC
Confidence 9999999876677888899999999999999875 34688887 566666675321 013577
Q ss_pred cCCCCCCCCCCcchhHHHHHhh--cCCC-ceEEEecCCceEecCCCCC
Q 028258 158 KEDSSRLPFPNFYYELEDVSAS--YSPA-ITYSVHRSSVIIGASPRSL 202 (211)
Q Consensus 158 ~e~~~~~~~~~~~~~~e~~l~~--~~~~-~~~~i~Rp~~i~G~~~~~~ 202 (211)
+|+++..+.++.|+..|+++.+ +..+ ++++++||+.+||++..++
T Consensus 142 ~E~~~~~~~~~~y~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~ 189 (364)
T 2v6g_A 142 TEDLPRLKYMNFYYDLEDIMLEEVEKKEGLTWSVHRPGNIFGFSPYSM 189 (364)
T ss_dssp CTTSCCCSSCCHHHHHHHHHHHHHTTSTTCEEEEEEESSEECCCTTCS
T ss_pred CccccCCccchhhHHHHHHHHHHhhcCCCceEEEECCCceeCCCCCcc
Confidence 8888754445678888888776 3355 9999999999999987543
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.94 E-value=7.5e-26 Score=191.56 Aligned_cols=171 Identities=15% Similarity=0.165 Sum_probs=127.9
Q ss_pred cccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCC-CcEEEEEeCCCCCCC--CCCCCceeEEEeeCC-CHHHHHHHHHh
Q 028258 3 KQDQNPKSVALIIGVTGISGLSLAEALKNPTTPGS-PWKVYGAARRPPPGW--FPTALVDRYITFDAL-DPTDTALKLSL 78 (211)
Q Consensus 3 ~~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~-g~~V~~~~R~~~~~~--~~~~~~~~~i~~Dl~-d~~~~~~~~~~ 78 (211)
+|..|++++|||||||||||++|+++|+ ++ ||+|++++|++.... ....+++ ++.+|++ |.+.+.+++++
T Consensus 18 ~~~~m~~~~vlVtGatG~iG~~l~~~L~-----~~~g~~V~~~~r~~~~~~~~~~~~~v~-~~~~Dl~~d~~~~~~~~~~ 91 (372)
T 3slg_A 18 GPGSMKAKKVLILGVNGFIGHHLSKRIL-----ETTDWEVFGMDMQTDRLGDLVKHERMH-FFEGDITINKEWVEYHVKK 91 (372)
T ss_dssp -----CCCEEEEESCSSHHHHHHHHHHH-----HHSSCEEEEEESCCTTTGGGGGSTTEE-EEECCTTTCHHHHHHHHHH
T ss_pred CCcccCCCEEEEECCCChHHHHHHHHHH-----hCCCCEEEEEeCChhhhhhhccCCCeE-EEeCccCCCHHHHHHHhcc
Confidence 4555667899999999999999999999 56 899999999876532 1237899 9999999 99999998886
Q ss_pred cccccceEEeecccCCc-----hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCC
Q 028258 79 ISQEITNLFWVPLQVQE-----SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPY 153 (211)
Q Consensus 79 ~~~~~~~v~~~a~~~~~-----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~ 153 (211)
+|+|||+|+.... ++.+.+++|+.++.++++++.+. + ++|+++||..+|+...
T Consensus 92 ----~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-----~-~~~v~~SS~~vyg~~~------------ 149 (372)
T 3slg_A 92 ----CDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKY-----G-KHLVFPSTSEVYGMCA------------ 149 (372)
T ss_dssp ----CSEEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHH-----T-CEEEEECCGGGGBSCC------------
T ss_pred ----CCEEEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHh-----C-CcEEEeCcHHHhCCCC------------
Confidence 7899999987653 34567799999999999999987 4 7999999999997531
Q ss_pred CCCCcCCCCCC-----CCCCcchhH-----HHHHhh-cCCCceEEEecCCceEecCCCC
Q 028258 154 EVPFKEDSSRL-----PFPNFYYEL-----EDVSAS-YSPAITYSVHRSSVIIGASPRS 201 (211)
Q Consensus 154 ~~~~~e~~~~~-----~~~~~~~~~-----e~~l~~-~~~~~~~~i~Rp~~i~G~~~~~ 201 (211)
..+++|+++.. ..|...|.. |+++.+ ...+++++++||+.+||++...
T Consensus 150 ~~~~~e~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~g~~~~ilRp~~v~G~~~~~ 208 (372)
T 3slg_A 150 DEQFDPDASALTYGPINKPRWIYACSKQLMDRVIWGYGMEGLNFTLFRPFNWIGPGLDS 208 (372)
T ss_dssp CSSBCTTTCCEEECCTTCTTHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSEECSSCCC
T ss_pred CCCCCccccccccCCCCCCCCcHHHHHHHHHHHHHHHHHCCCCEEEEccccccCCCccc
Confidence 24556655321 123334443 444443 2229999999999999998643
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.94 E-value=1e-25 Score=178.36 Aligned_cols=160 Identities=9% Similarity=0.014 Sum_probs=120.2
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccceEEee
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITNLFWV 89 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~~~ 89 (211)
++|||||||||||++++++|+ ++|++|++++|++.+......+++ ++.+|++|++++.+++++ +|+|||+
T Consensus 5 ~~ilItGatG~iG~~l~~~L~-----~~g~~V~~~~r~~~~~~~~~~~~~-~~~~Dl~d~~~~~~~~~~----~d~vi~~ 74 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEAL-----NRGFEVTAVVRHPEKIKIENEHLK-VKKADVSSLDEVCEVCKG----ADAVISA 74 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHH-----TTTCEEEEECSCGGGCCCCCTTEE-EECCCTTCHHHHHHHHTT----CSEEEEC
T ss_pred CEEEEEcCCchHHHHHHHHHH-----HCCCEEEEEEcCcccchhccCceE-EEEecCCCHHHHHHHhcC----CCEEEEe
Confidence 689999999999999999999 689999999998765432347889 999999999999999886 6899999
Q ss_pred cccCCchhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCCCCCCCCCc
Q 028258 90 PLQVQESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNF 169 (211)
Q Consensus 90 a~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~~~~~~~~~ 169 (211)
++.....+ +.+++|+.++.++++++.+. ++++|+++||..+|.... ....++.+. .|..
T Consensus 75 a~~~~~~~-~~~~~n~~~~~~l~~~~~~~-----~~~~~v~~Ss~~~~~~~~-------------~~~~~~~~~--~p~~ 133 (227)
T 3dhn_A 75 FNPGWNNP-DIYDETIKVYLTIIDGVKKA-----GVNRFLMVGGAGSLFIAP-------------GLRLMDSGE--VPEN 133 (227)
T ss_dssp CCC-------CCSHHHHHHHHHHHHHHHT-----TCSEEEEECCSTTSEEET-------------TEEGGGTTC--SCGG
T ss_pred CcCCCCCh-hHHHHHHHHHHHHHHHHHHh-----CCCEEEEeCChhhccCCC-------------CCccccCCc--chHH
Confidence 97653322 36788999999999999987 578999999987664321 112333432 2344
Q ss_pred chhHHH-----HHhh--cCCCceEEEecCCceEecCCC
Q 028258 170 YYELED-----VSAS--YSPAITYSVHRSSVIIGASPR 200 (211)
Q Consensus 170 ~~~~e~-----~l~~--~~~~~~~~i~Rp~~i~G~~~~ 200 (211)
.|...| ++.. +..+++++++||+.+||+...
T Consensus 134 ~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~ 171 (227)
T 3dhn_A 134 ILPGVKALGEFYLNFLMKEKEIDWVFFSPAADMRPGVR 171 (227)
T ss_dssp GHHHHHHHHHHHHHTGGGCCSSEEEEEECCSEEESCCC
T ss_pred HHHHHHHHHHHHHHHHhhccCccEEEEeCCcccCCCcc
Confidence 444333 2222 367999999999999999763
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=99.94 E-value=9.9e-26 Score=186.59 Aligned_cols=161 Identities=13% Similarity=0.163 Sum_probs=126.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccceEE
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITNLF 87 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~ 87 (211)
|+++|||||||||||++|+++|+ ++|++|++++|++.... ..+++ ++.+|++ ++++.+++++ +|+||
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~-----~~g~~V~~~~r~~~~~~--~~~~~-~~~~Dl~-~~~~~~~~~~----~d~Vi 67 (311)
T 3m2p_A 1 MSLKIAVTGGTGFLGQYVVESIK-----NDGNTPIILTRSIGNKA--INDYE-YRVSDYT-LEDLINQLND----VDAVV 67 (311)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESCCC-------CCE-EEECCCC-HHHHHHHTTT----CSEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHH-----hCCCEEEEEeCCCCccc--CCceE-EEEcccc-HHHHHHhhcC----CCEEE
Confidence 34789999999999999999999 68999999999844322 24889 9999999 9888888874 78999
Q ss_pred eecccCCc-hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCCCCCCC
Q 028258 88 WVPLQVQE-SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPF 166 (211)
Q Consensus 88 ~~a~~~~~-~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~~~~~~ 166 (211)
|+|+.... ++...+++|+.++.++++++.+. ++++|+++||..+|+.+. ..|++|+++. .
T Consensus 68 h~a~~~~~~~~~~~~~~n~~~~~~ll~a~~~~-----~~~r~v~~SS~~vyg~~~------------~~~~~E~~~~--~ 128 (311)
T 3m2p_A 68 HLAATRGSQGKISEFHDNEILTQNLYDACYEN-----NISNIVYASTISAYSDET------------SLPWNEKELP--L 128 (311)
T ss_dssp ECCCCCCSSSCGGGTHHHHHHHHHHHHHHHHT-----TCCEEEEEEEGGGCCCGG------------GCSBCTTSCC--C
T ss_pred EccccCCCCChHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEEccHHHhCCCC------------CCCCCCCCCC--C
Confidence 99987543 56677899999999999999987 678999999999997531 3577888874 3
Q ss_pred CCcchhH-----HHHHhh--cCCCceEEEecCCceEecCCC
Q 028258 167 PNFYYEL-----EDVSAS--YSPAITYSVHRSSVIIGASPR 200 (211)
Q Consensus 167 ~~~~~~~-----e~~l~~--~~~~~~~~i~Rp~~i~G~~~~ 200 (211)
|...|.. |+++.+ ...+++++++||+.+||+...
T Consensus 129 p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~ 169 (311)
T 3m2p_A 129 PDLMYGVSKLACEHIGNIYSRKKGLCIKNLRFAHLYGFNEK 169 (311)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHHSCCEEEEEEECEEECSCC-
T ss_pred CCchhHHHHHHHHHHHHHHHHHcCCCEEEEeeCceeCcCCC
Confidence 3444443 444433 337999999999999999764
|
| >4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.93 E-value=9.1e-26 Score=189.16 Aligned_cols=166 Identities=12% Similarity=0.038 Sum_probs=127.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCC--cEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSP--WKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g--~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
++++|||||||||||++|+++|+ ++| ++|++++|...... ...++++ ++.+|++|++.+.+++++
T Consensus 23 ~~~~vlVtGatG~iG~~l~~~L~-----~~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~Dl~d~~~~~~~~~~ 96 (346)
T 4egb_A 23 NAMNILVTGGAGFIGSNFVHYML-----QSYETYKIINFDALTYSGNLNNVKSIQDHPNYY-FVKGEIQNGELLEHVIKE 96 (346)
T ss_dssp -CEEEEEETTTSHHHHHHHHHHH-----HHCTTEEEEEEECCCTTCCGGGGTTTTTCTTEE-EEECCTTCHHHHHHHHHH
T ss_pred CCCeEEEECCccHHHHHHHHHHH-----hhCCCcEEEEEeccccccchhhhhhhccCCCeE-EEEcCCCCHHHHHHHHhh
Confidence 35789999999999999999999 577 88999988653211 1236889 999999999999999988
Q ss_pred cccccceEEeecccCC-----chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCC
Q 028258 79 ISQEITNLFWVPLQVQ-----ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPY 153 (211)
Q Consensus 79 ~~~~~~~v~~~a~~~~-----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~ 153 (211)
.+ +|+|||+|+... .++...+++|+.++.++++++.+. ++++|+++||..+|+... .
T Consensus 97 ~~--~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-----~~~~~v~~SS~~vy~~~~-----------~ 158 (346)
T 4egb_A 97 RD--VQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKY-----PHIKLVQVSTDEVYGSLG-----------K 158 (346)
T ss_dssp HT--CCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHS-----TTSEEEEEEEGGGGCCCC-----------S
T ss_pred cC--CCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhc-----CCCEEEEeCchHHhCCCC-----------c
Confidence 54 799999998753 245567899999999999999987 678999999999997531 1
Q ss_pred CCCCcCCCCCCCCCCcchhH-----HHHHhh--cCCCceEEEecCCceEecCC
Q 028258 154 EVPFKEDSSRLPFPNFYYEL-----EDVSAS--YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 154 ~~~~~e~~~~~~~~~~~~~~-----e~~l~~--~~~~~~~~i~Rp~~i~G~~~ 199 (211)
..+++|+++. .|...|.. |.++.+ ...+++++++||+.+||+..
T Consensus 159 ~~~~~E~~~~--~p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~ 209 (346)
T 4egb_A 159 TGRFTEETPL--APNSPYSSSKASADMIALAYYKTYQLPVIVTRCSNNYGPYQ 209 (346)
T ss_dssp SCCBCTTSCC--CCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTC
T ss_pred CCCcCCCCCC--CCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeecceeCcCC
Confidence 4578888875 34444443 333333 23589999999999999875
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=3.7e-26 Score=191.91 Aligned_cols=164 Identities=16% Similarity=0.096 Sum_probs=129.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCC-----C-C------CCceeEEEeeCCCHHHHHHH
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF-----P-T------ALVDRYITFDALDPTDTALK 75 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~-----~-~------~~~~~~i~~Dl~d~~~~~~~ 75 (211)
++++|||||||||||++|+++|+ ++|++|++++|++..... . . .+++ ++.+|++|++.+.++
T Consensus 24 ~~~~vlVtGatG~iG~~l~~~L~-----~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~~~~~ 97 (351)
T 3ruf_A 24 SPKTWLITGVAGFIGSNLLEKLL-----KLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFC-FIEGDIRDLTTCEQV 97 (351)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEE-EEECCTTCHHHHHHH
T ss_pred CCCeEEEECCCcHHHHHHHHHHH-----HCCCEEEEEeCCCCCchhhhhhhhhccccccCCceE-EEEccCCCHHHHHHH
Confidence 46899999999999999999999 689999999997654210 0 0 6789 999999999999988
Q ss_pred HHhcccccceEEeecccCCc-----hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCC
Q 028258 76 LSLISQEITNLFWVPLQVQE-----SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQL 150 (211)
Q Consensus 76 ~~~~~~~~~~v~~~a~~~~~-----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~ 150 (211)
+++ +|+|||+|+.... ++...+++|+.++.++++++.+. ++++|+++||..+|+..
T Consensus 98 ~~~----~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-----~~~~~v~~SS~~vyg~~---------- 158 (351)
T 3ruf_A 98 MKG----VDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNA-----QVQSFTYAASSSTYGDH---------- 158 (351)
T ss_dssp TTT----CSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-----TCSEEEEEEEGGGGTTC----------
T ss_pred hcC----CCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEEecHHhcCCC----------
Confidence 874 7899999987442 34567799999999999999987 67899999999999753
Q ss_pred CCCCCCCcCCCCCCCCCCcchhH-----HHHHhh--cCCCceEEEecCCceEecCCC
Q 028258 151 MPYEVPFKEDSSRLPFPNFYYEL-----EDVSAS--YSPAITYSVHRSSVIIGASPR 200 (211)
Q Consensus 151 ~~~~~~~~e~~~~~~~~~~~~~~-----e~~l~~--~~~~~~~~i~Rp~~i~G~~~~ 200 (211)
...|++|+++. .|...|.. |+++.. ...+++++++||+.+||++..
T Consensus 159 --~~~~~~E~~~~--~p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~ 211 (351)
T 3ruf_A 159 --PALPKVEENIG--NPLSPYAVTKYVNEIYAQVYARTYGFKTIGLRYFNVFGRRQD 211 (351)
T ss_dssp --CCSSBCTTCCC--CCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEECSEESTTCC
T ss_pred --CCCCCccCCCC--CCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeeCceeCcCCC
Confidence 13578888874 33444443 333333 235899999999999999753
|
| >4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=2.2e-25 Score=186.89 Aligned_cols=158 Identities=17% Similarity=0.138 Sum_probs=124.1
Q ss_pred CCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccce
Q 028258 6 QNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITN 85 (211)
Q Consensus 6 ~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~ 85 (211)
...+|+|||||||||||++|+++|+ ++|++|++++|++.. .+++ ++.+|++|++.+.+++++ +|+
T Consensus 16 ~~~~~~vlVtGatG~iG~~l~~~L~-----~~G~~V~~~~r~~~~-----~~~~-~~~~Dl~d~~~~~~~~~~----~d~ 80 (347)
T 4id9_A 16 PRGSHMILVTGSAGRVGRAVVAALR-----TQGRTVRGFDLRPSG-----TGGE-EVVGSLEDGQALSDAIMG----VSA 80 (347)
T ss_dssp -----CEEEETTTSHHHHHHHHHHH-----HTTCCEEEEESSCCS-----SCCS-EEESCTTCHHHHHHHHTT----CSE
T ss_pred ccCCCEEEEECCCChHHHHHHHHHH-----hCCCEEEEEeCCCCC-----CCcc-EEecCcCCHHHHHHHHhC----CCE
Confidence 3346789999999999999999999 689999999998654 5788 999999999999998885 789
Q ss_pred EEeecccCCc---hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCCC
Q 028258 86 LFWVPLQVQE---SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSS 162 (211)
Q Consensus 86 v~~~a~~~~~---~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~~ 162 (211)
|||+|+.... .+...+++|+.++.++++++.+. ++++|+++||..+|+.... ...|++|+.+
T Consensus 81 vih~A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-----~~~~~V~~SS~~vyg~~~~----------~~~~~~E~~~ 145 (347)
T 4id9_A 81 VLHLGAFMSWAPADRDRMFAVNVEGTRRLLDAASAA-----GVRRFVFASSGEVYPENRP----------EFLPVTEDHP 145 (347)
T ss_dssp EEECCCCCCSSGGGHHHHHHHHTHHHHHHHHHHHHT-----TCSEEEEEEEGGGTTTTSC----------SSSSBCTTSC
T ss_pred EEECCcccCcchhhHHHHHHHHHHHHHHHHHHHHHc-----CCCeEEEECCHHHhCCCCC----------CCCCcCCCCC
Confidence 9999987543 34677899999999999999886 6789999999999975211 2457888887
Q ss_pred CCCCCCcchhH-----HHHHhh--cCCCceEEEecCCceE
Q 028258 163 RLPFPNFYYEL-----EDVSAS--YSPAITYSVHRSSVII 195 (211)
Q Consensus 163 ~~~~~~~~~~~-----e~~l~~--~~~~~~~~i~Rp~~i~ 195 (211)
. .|...|.. |+++.. ...+++++++||+.+|
T Consensus 146 ~--~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~ 183 (347)
T 4id9_A 146 L--CPNSPYGLTKLLGEELVRFHQRSGAMETVILRFSHTQ 183 (347)
T ss_dssp C--CCCSHHHHHHHHHHHHHHHHHHHSSSEEEEEEECEEE
T ss_pred C--CCCChHHHHHHHHHHHHHHHHHhcCCceEEEccceEe
Confidence 4 33444443 444433 3468999999999999
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.93 E-value=5.2e-25 Score=184.06 Aligned_cols=166 Identities=17% Similarity=0.106 Sum_probs=129.4
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCC--------CCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF--------PTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~--------~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
+++++|||||||||||++++++|+ ++|++|++++|+...... ...+++ ++.+|++|++++.++++.
T Consensus 3 ~~~~~vlVTGatG~iG~~l~~~L~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~~~~~~~~ 76 (341)
T 3enk_A 3 STKGTILVTGGAGYIGSHTAVELL-----AHGYDVVIADNLVNSKREAIARIEKITGKTPA-FHETDVSDERALARIFDA 76 (341)
T ss_dssp CSSCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEECCCSSSCTHHHHHHHHHHSCCCE-EECCCTTCHHHHHHHHHH
T ss_pred CCCcEEEEecCCcHHHHHHHHHHH-----HCCCcEEEEecCCcchHHHHHHHHhhcCCCce-EEEeecCCHHHHHHHHhc
Confidence 356799999999999999999999 689999999997664320 134788 999999999999999986
Q ss_pred cccccceEEeecccCCc-----hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCC
Q 028258 79 ISQEITNLFWVPLQVQE-----SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPY 153 (211)
Q Consensus 79 ~~~~~~~v~~~a~~~~~-----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~ 153 (211)
.. +|+|||+|+.... .+.+.+++|+.++.++++++++. ++++|+++||..+|+.+ .
T Consensus 77 ~~--~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~iv~~SS~~~~g~~------------~ 137 (341)
T 3enk_A 77 HP--ITAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRER-----AVKRIVFSSSATVYGVP------------E 137 (341)
T ss_dssp SC--CCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-----TCCEEEEEEEGGGBCSC------------S
T ss_pred cC--CcEEEECccccccCccccChHHHHHHHHHHHHHHHHHHHhC-----CCCEEEEEecceEecCC------------C
Confidence 43 7999999987542 34467889999999999999886 56899999999999753 1
Q ss_pred CCCCcCCCCCCCCCCcchhH-----HHHHhh---cCCCceEEEecCCceEecCC
Q 028258 154 EVPFKEDSSRLPFPNFYYEL-----EDVSAS---YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 154 ~~~~~e~~~~~~~~~~~~~~-----e~~l~~---~~~~~~~~i~Rp~~i~G~~~ 199 (211)
..|++|+.+.. |...|.. |.++.. ...+++++++||+.+||+..
T Consensus 138 ~~~~~e~~~~~--~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lRp~~v~G~~~ 189 (341)
T 3enk_A 138 RSPIDETFPLS--ATNPYGQTKLMAEQILRDVEAADPSWRVATLRYFNPVGAHE 189 (341)
T ss_dssp SSSBCTTSCCB--CSSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCT
T ss_pred CCCCCCCCCCC--CCChhHHHHHHHHHHHHHHhhcCCCceEEEEeeccccCCcc
Confidence 45778887742 3444443 333333 23469999999999999965
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.93 E-value=9.6e-25 Score=184.37 Aligned_cols=168 Identities=18% Similarity=0.130 Sum_probs=127.5
Q ss_pred CccccCC-CCCeEEEEcCCChHHHHHHHHhhCCCCCC--CCcEEEEEeCCCCC------------C--CCCCCCceeEEE
Q 028258 1 MEKQDQN-PKSVALIIGVTGISGLSLAEALKNPTTPG--SPWKVYGAARRPPP------------G--WFPTALVDRYIT 63 (211)
Q Consensus 1 ~~~~~~~-~~~~ilVtGatG~iG~~l~~~L~~~~~~~--~g~~V~~~~R~~~~------------~--~~~~~~~~~~i~ 63 (211)
|..|.+. ++++|||||||||||++|+++|+ + .|++|++++|+... . .....+++ ++.
T Consensus 1 M~~~~~~~~~~~vlVTGatG~IG~~l~~~L~-----~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 74 (362)
T 3sxp_A 1 MRYIDDELENQTILITGGAGFVGSNLAFHFQ-----ENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGE-VIA 74 (362)
T ss_dssp CCSSSCCCTTCEEEEETTTSHHHHHHHHHHH-----HHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSE-EEE
T ss_pred CcccchhcCCCEEEEECCCCHHHHHHHHHHH-----hhCCCCeEEEEECCCccccccccchhhhhhhhhccccCce-EEE
Confidence 5555543 46899999999999999999999 6 89999999996541 1 01234678 999
Q ss_pred eeCCCHHHHHHH-HHhcccccceEEeecccCC---chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeec
Q 028258 64 FDALDPTDTALK-LSLISQEITNLFWVPLQVQ---ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMG 139 (211)
Q Consensus 64 ~Dl~d~~~~~~~-~~~~~~~~~~v~~~a~~~~---~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~ 139 (211)
+|++|++.+.++ .. . +|+|||+|+... .++...+++|+.++.++++++.+. +++ |+++||..+|+.
T Consensus 75 ~Dl~d~~~~~~~~~~---~-~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~-----~~~-~V~~SS~~vyg~ 144 (362)
T 3sxp_A 75 ADINNPLDLRRLEKL---H-FDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSK-----KAK-VIYASSAGVYGN 144 (362)
T ss_dssp CCTTCHHHHHHHTTS---C-CSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHT-----TCE-EEEEEEGGGGCS
T ss_pred CCCCCHHHHHHhhcc---C-CCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHc-----CCc-EEEeCcHHHhCC
Confidence 999999988877 22 2 899999998654 356778899999999999999886 456 999999989874
Q ss_pred ccCCccccCCCCCCCCCCcCCCCCCCCCCcchhHHH-----HHhhcCCCceEEEecCCceEecCC
Q 028258 140 PIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELED-----VSASYSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 140 ~~~~~~~~g~~~~~~~~~~e~~~~~~~~~~~~~~e~-----~l~~~~~~~~~~i~Rp~~i~G~~~ 199 (211)
+ ..+.+|+++. .|...|...| ++......++++++||+.+|||+.
T Consensus 145 ~-------------~~~~~E~~~~--~p~~~Y~~sK~~~E~~~~~~~~~~~~~~lR~~~v~Gp~~ 194 (362)
T 3sxp_A 145 T-------------KAPNVVGKNE--SPENVYGFSKLCMDEFVLSHSNDNVQVGLRYFNVYGPRE 194 (362)
T ss_dssp C-------------CSSBCTTSCC--CCSSHHHHHHHHHHHHHHHTTTTSCEEEEEECSEESTTC
T ss_pred C-------------CCCCCCCCCC--CCCChhHHHHHHHHHHHHHHhccCCEEEEEeCceeCcCC
Confidence 3 2377888874 3444454433 333322238999999999999986
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.1e-24 Score=183.33 Aligned_cols=174 Identities=16% Similarity=0.057 Sum_probs=130.2
Q ss_pred CccccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCC------CCCCceeEEEeeCCCHHHHHH
Q 028258 1 MEKQDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF------PTALVDRYITFDALDPTDTAL 74 (211)
Q Consensus 1 ~~~~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~------~~~~~~~~i~~Dl~d~~~~~~ 74 (211)
|....++.+++|||||||||||++|+++|+ +.|++|++++|++..... ...+++ ++.+|++|++.+.+
T Consensus 1 mi~~~~~~~~~vlVtGatG~iG~~l~~~L~-----~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~~~~ 74 (357)
T 1rkx_A 1 MINNSFWQGKRVFVTGHTGFKGGWLSLWLQ-----TMGATVKGYSLTAPTVPSLFETARVADGMQ-SEIGDIRDQNKLLE 74 (357)
T ss_dssp -CCHHHHTTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESSCSSSSCHHHHTTTTTTSE-EEECCTTCHHHHHH
T ss_pred CCCchhhCCCEEEEECCCchHHHHHHHHHH-----hCCCeEEEEeCCCcccchhhHhhccCCceE-EEEccccCHHHHHH
Confidence 333344456889999999999999999999 689999999998654321 135788 99999999999999
Q ss_pred HHHhcccccceEEeecccCC-----chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCC
Q 028258 75 KLSLISQEITNLFWVPLQVQ-----ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQ 149 (211)
Q Consensus 75 ~~~~~~~~~~~v~~~a~~~~-----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~ 149 (211)
++++.. +|+|||+|+... .++...+++|+.++.++++++.+. . .+++|+++||..+|+...
T Consensus 75 ~~~~~~--~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~---~-~~~~~v~~SS~~vyg~~~-------- 140 (357)
T 1rkx_A 75 SIREFQ--PEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHV---G-GVKAVVNITSDKCYDNKE-------- 140 (357)
T ss_dssp HHHHHC--CSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHH---C-CCCEEEEECCGGGBCCCC--------
T ss_pred HHHhcC--CCEEEECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHh---C-CCCeEEEecCHHHhCCCC--------
Confidence 998764 799999998643 234567899999999999999876 2 378999999999997531
Q ss_pred CCCCCCCCcCCCCCCCCCCcchhH-----HHHHhh--c---------CCCceEEEecCCceEecCC
Q 028258 150 LMPYEVPFKEDSSRLPFPNFYYEL-----EDVSAS--Y---------SPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 150 ~~~~~~~~~e~~~~~~~~~~~~~~-----e~~l~~--~---------~~~~~~~i~Rp~~i~G~~~ 199 (211)
...+.+|+++. .+...|.. |.++.. . ..+++++++||+.+||++.
T Consensus 141 ---~~~~~~E~~~~--~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~ 201 (357)
T 1rkx_A 141 ---WIWGYRENEAM--GGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGD 201 (357)
T ss_dssp ---SSSCBCTTSCB--CCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTC
T ss_pred ---cCCCCCCCCCC--CCCCccHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCC
Confidence 12356776653 23333433 333333 1 1389999999999999875
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.92 E-value=4.5e-24 Score=177.62 Aligned_cols=163 Identities=15% Similarity=0.054 Sum_probs=126.7
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-CCCCCceeEEEeeCCCHHHHHHHHHhcccccceEEe
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-FPTALVDRYITFDALDPTDTALKLSLISQEITNLFW 88 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~~ 88 (211)
++|||||||||||++|+++|+ ++|++|++++|+..... ....+++ ++.+|++|++.+.++++... +|+|||
T Consensus 2 ~~ilVtGatG~iG~~l~~~L~-----~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~--~d~vih 73 (330)
T 2c20_A 2 NSILICGGAGYIGSHAVKKLV-----DEGLSVVVVDNLQTGHEDAITEGAK-FYNGDLRDKAFLRDVFTQEN--IEAVMH 73 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEECCSSCCGGGSCTTSE-EEECCTTCHHHHHHHHHHSC--EEEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHH-----hCCCEEEEEeCCCcCchhhcCCCcE-EEECCCCCHHHHHHHHhhcC--CCEEEE
Confidence 579999999999999999999 68999999999754321 1123788 99999999999999888532 799999
Q ss_pred ecccCCc-----hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCCCC
Q 028258 89 VPLQVQE-----SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSR 163 (211)
Q Consensus 89 ~a~~~~~-----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~~~ 163 (211)
+|+.... ++...+++|+.++.++++++.+. ++++|+++||..+|+.+ ...|++|+++.
T Consensus 74 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-----~~~~~v~~Ss~~~~~~~------------~~~~~~E~~~~ 136 (330)
T 2c20_A 74 FAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEF-----KVDKFIFSSTAATYGEV------------DVDLITEETMT 136 (330)
T ss_dssp CCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHT-----TCCEEEEECCGGGGCSC------------SSSSBCTTSCC
T ss_pred CCcccCccccccCHHHHHHHHhHHHHHHHHHHHHc-----CCCEEEEeCCceeeCCC------------CCCCCCcCCCC
Confidence 9987542 34567899999999999999876 57899999999988743 13577888774
Q ss_pred CCCCCcchhH-----HHHHhh--cCCCceEEEecCCceEecCC
Q 028258 164 LPFPNFYYEL-----EDVSAS--YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 164 ~~~~~~~~~~-----e~~l~~--~~~~~~~~i~Rp~~i~G~~~ 199 (211)
.|...|.. |.++.. ...+++++++||+.+||+..
T Consensus 137 --~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~ 177 (330)
T 2c20_A 137 --NPTNTYGETKLAIEKMLHWYSQASNLRYKIFRYFNVAGATP 177 (330)
T ss_dssp --CCSSHHHHHHHHHHHHHHHHHHTSSCEEEEEECSEEECCCT
T ss_pred --CCCChHHHHHHHHHHHHHHHHHHhCCcEEEEecCcccCCCC
Confidence 33334443 444333 34589999999999999974
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} | Back alignment and structure |
|---|
Probab=99.92 E-value=3.4e-24 Score=177.68 Aligned_cols=165 Identities=20% Similarity=0.206 Sum_probs=127.3
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccceEEe
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITNLFW 88 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~~ 88 (211)
.++|||||||||||++|+++|+ ++|++|++++|++.... -+++ ++.+|++|++.+.+++++.. +|+|||
T Consensus 12 ~~~vlVTGatG~iG~~l~~~L~-----~~G~~V~~~~r~~~~~~---l~~~-~~~~Dl~d~~~~~~~~~~~~--~d~vih 80 (321)
T 2pk3_A 12 SMRALITGVAGFVGKYLANHLT-----EQNVEVFGTSRNNEAKL---PNVE-MISLDIMDSQRVKKVISDIK--PDYIFH 80 (321)
T ss_dssp -CEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESCTTCCC---TTEE-EEECCTTCHHHHHHHHHHHC--CSEEEE
T ss_pred cceEEEECCCChHHHHHHHHHH-----HCCCEEEEEecCCcccc---ceee-EEECCCCCHHHHHHHHHhcC--CCEEEE
Confidence 4689999999999999999999 68999999999866421 2788 99999999999999988743 799999
Q ss_pred ecccCCc-----hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCCCC
Q 028258 89 VPLQVQE-----SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSR 163 (211)
Q Consensus 89 ~a~~~~~-----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~~~ 163 (211)
+|+.... ++...+++|+.++.++++++... . ++++|+++||..+|+.... ...|++|+++.
T Consensus 81 ~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~---~-~~~~iv~~SS~~v~g~~~~----------~~~~~~E~~~~ 146 (321)
T 2pk3_A 81 LAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDS---N-LDCRILTIGSSEEYGMILP----------EESPVSEENQL 146 (321)
T ss_dssp CCSCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHH---T-CCCEEEEEEEGGGTBSCCG----------GGCSBCTTSCC
T ss_pred cCcccchhhhhhcHHHHHHHHHHHHHHHHHHHHHh---C-CCCeEEEEccHHhcCCCCC----------CCCCCCCCCCC
Confidence 9987542 45677899999999999999664 1 4789999999998874210 13567888764
Q ss_pred CCCCCcchhH-----HHHHhh--cCCCceEEEecCCceEecCCC
Q 028258 164 LPFPNFYYEL-----EDVSAS--YSPAITYSVHRSSVIIGASPR 200 (211)
Q Consensus 164 ~~~~~~~~~~-----e~~l~~--~~~~~~~~i~Rp~~i~G~~~~ 200 (211)
.|...|.. |.++.. ...+++++++||+.+||+...
T Consensus 147 --~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~ 188 (321)
T 2pk3_A 147 --RPMSPYGVSKASVGMLARQYVKAYGMDIIHTRTFNHIGPGQS 188 (321)
T ss_dssp --BCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCC
T ss_pred --CCCCccHHHHHHHHHHHHHHHHHcCCCEEEEEeCcccCcCCC
Confidence 23334443 333333 234899999999999999763
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=2.3e-24 Score=175.19 Aligned_cols=161 Identities=11% Similarity=-0.015 Sum_probs=128.8
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccceEEe
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITNLFW 88 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~~ 88 (211)
+|+||||||||+||++++++|+ +.|++|++++|++.+.. ..+++ ++.+|++|++++.+++++ +|+|||
T Consensus 3 ~k~vlVTGasg~IG~~la~~L~-----~~G~~V~~~~r~~~~~~--~~~~~-~~~~Dl~d~~~~~~~~~~----~D~vi~ 70 (267)
T 3rft_A 3 MKRLLVTGAAGQLGRVMRERLA-----PMAEILRLADLSPLDPA--GPNEE-CVQCDLADANAVNAMVAG----CDGIVH 70 (267)
T ss_dssp EEEEEEESTTSHHHHHHHHHTG-----GGEEEEEEEESSCCCCC--CTTEE-EEECCTTCHHHHHHHHTT----CSEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHH-----hcCCEEEEEecCCcccc--CCCCE-EEEcCCCCHHHHHHHHcC----CCEEEE
Confidence 4789999999999999999999 68999999999876542 46788 999999999999998885 789999
Q ss_pred ecccCC-chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCCCCCCCC
Q 028258 89 VPLQVQ-ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFP 167 (211)
Q Consensus 89 ~a~~~~-~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~~~~~~~ 167 (211)
+|+... .++...+++|+.++.++++++.+. +.++|+++||..+|+... ...+++|+.+. .+
T Consensus 71 ~Ag~~~~~~~~~~~~~N~~g~~~l~~a~~~~-----~~~~iv~~SS~~~~g~~~-----------~~~~~~e~~~~--~~ 132 (267)
T 3rft_A 71 LGGISVEKPFEQILQGNIIGLYNLYEAARAH-----GQPRIVFASSNHTIGYYP-----------QTERLGPDVPA--RP 132 (267)
T ss_dssp CCSCCSCCCHHHHHHHHTHHHHHHHHHHHHT-----TCCEEEEEEEGGGGTTSB-----------TTSCBCTTSCC--CC
T ss_pred CCCCcCcCCHHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEEcchHHhCCCC-----------CCCCCCCCCCC--CC
Confidence 998854 367788899999999999999876 578999999988886421 13467787764 34
Q ss_pred CcchhHHHHHhh-------cCCCceEEEecCCceEecCC
Q 028258 168 NFYYELEDVSAS-------YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 168 ~~~~~~e~~l~~-------~~~~~~~~i~Rp~~i~G~~~ 199 (211)
...|...|...+ ...+++++++||+.|+|+..
T Consensus 133 ~~~Y~~sK~~~e~~~~~~a~~~g~~~~~vr~~~v~~~~~ 171 (267)
T 3rft_A 133 DGLYGVSKCFGENLARMYFDKFGQETALVRIGSCTPEPN 171 (267)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECBCSSSCC
T ss_pred CChHHHHHHHHHHHHHHHHHHhCCeEEEEEeecccCCCC
Confidence 444544333222 24689999999999998743
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} | Back alignment and structure |
|---|
Probab=99.92 E-value=7.2e-25 Score=180.94 Aligned_cols=163 Identities=15% Similarity=0.114 Sum_probs=125.2
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCC--CcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccceE
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGS--PWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITNL 86 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~--g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v 86 (211)
+++|||||||||||++|+++|+ ++ |++|++++|++.... ...+++ ++.+|++|++++.++++... +|+|
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~-----~~~~g~~V~~~~r~~~~~~-~~~~~~-~~~~D~~d~~~~~~~~~~~~--~d~v 72 (312)
T 2yy7_A 2 NPKILIIGACGQIGTELTQKLR-----KLYGTENVIASDIRKLNTD-VVNSGP-FEVVNALDFNQIEHLVEVHK--ITDI 72 (312)
T ss_dssp CCCEEEETTTSHHHHHHHHHHH-----HHHCGGGEEEEESCCCSCH-HHHSSC-EEECCTTCHHHHHHHHHHTT--CCEE
T ss_pred CceEEEECCccHHHHHHHHHHH-----HhCCCCEEEEEcCCCcccc-ccCCCc-eEEecCCCHHHHHHHHhhcC--CCEE
Confidence 4779999999999999999999 56 899999999765421 124678 99999999999999988543 7999
Q ss_pred EeecccCC----chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCCC
Q 028258 87 FWVPLQVQ----ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSS 162 (211)
Q Consensus 87 ~~~a~~~~----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~~ 162 (211)
||+|+... .++...+++|+.++.++++++.+. ++++|+++||..+|+... ...+.+|+.+
T Consensus 73 ih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~~v~~SS~~~~~~~~-----------~~~~~~e~~~ 136 (312)
T 2yy7_A 73 YLMAALLSATAEKNPAFAWDLNMNSLFHVLNLAKAK-----KIKKIFWPSSIAVFGPTT-----------PKENTPQYTI 136 (312)
T ss_dssp EECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHTT-----SCSEEECCEEGGGCCTTS-----------CSSSBCSSCB
T ss_pred EECCccCCCchhhChHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEeccHHHhCCCC-----------CCCCccccCc
Confidence 99998743 245567899999999999999876 578999999999997421 1245667765
Q ss_pred CCCCCCcchhH-----HHHHhh--cCCCceEEEecCCceEecC
Q 028258 163 RLPFPNFYYEL-----EDVSAS--YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 163 ~~~~~~~~~~~-----e~~l~~--~~~~~~~~i~Rp~~i~G~~ 198 (211)
. .|...|.. |.++.. ...+++++++||+.+||+.
T Consensus 137 ~--~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~g~~ 177 (312)
T 2yy7_A 137 M--EPSTVYGISKQAGERWCEYYHNIYGVDVRSIRYPGLISWS 177 (312)
T ss_dssp C--CCCSHHHHHHHHHHHHHHHHHHHHCCEEECEEECEEECSS
T ss_pred C--CCCchhHHHHHHHHHHHHHHHHhcCCcEEEEeCCeEecCC
Confidence 3 23344443 333332 2358999999999999975
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.1e-23 Score=176.46 Aligned_cols=166 Identities=13% Similarity=0.044 Sum_probs=126.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC------CC-----C---CCCCceeEEEeeCCCHHHHH
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP------GW-----F---PTALVDRYITFDALDPTDTA 73 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~------~~-----~---~~~~~~~~i~~Dl~d~~~~~ 73 (211)
|+|+|||||||||||++|+++|+ ++|++|++++|+... .. . ...+++ ++.+|++|++++.
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~-----~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~-~~~~D~~~~~~~~ 74 (348)
T 1ek6_A 1 MAEKVLVTGGAGYIGSHTVLELL-----EAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVE-FEEMDILDQGALQ 74 (348)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHH-----HTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCE-EEECCTTCHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-----HCCCEEEEEecCCcccccccccHHHHHHHHhccCCceE-EEECCCCCHHHHH
Confidence 45789999999999999999999 689999999986532 10 0 124678 9999999999999
Q ss_pred HHHHhcccccceEEeecccCCc-----hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccC
Q 028258 74 LKLSLISQEITNLFWVPLQVQE-----SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAG 148 (211)
Q Consensus 74 ~~~~~~~~~~~~v~~~a~~~~~-----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g 148 (211)
++++... +|+|||+|+.... ++...+++|+.++.++++++.+. ++++|+++||..+|+.+
T Consensus 75 ~~~~~~~--~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~iv~~SS~~~~g~~-------- 139 (348)
T 1ek6_A 75 RLFKKYS--FMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAH-----GVKNLVFSSSATVYGNP-------- 139 (348)
T ss_dssp HHHHHCC--EEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-----TCCEEEEEEEGGGGCSC--------
T ss_pred HHHHhcC--CCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHh-----CCCEEEEECcHHHhCCC--------
Confidence 9888543 7999999987542 34567899999999999999876 57899999999888743
Q ss_pred CCCCCCCCCcCCCCCCCCCCcchhH-----HHHHhh--cC-CCceEEEecCCceEecCC
Q 028258 149 QLMPYEVPFKEDSSRLPFPNFYYEL-----EDVSAS--YS-PAITYSVHRSSVIIGASP 199 (211)
Q Consensus 149 ~~~~~~~~~~e~~~~~~~~~~~~~~-----e~~l~~--~~-~~~~~~i~Rp~~i~G~~~ 199 (211)
...+++|+++..+. ...|.. |.++.. .. ++++++++||+.+||+.+
T Consensus 140 ----~~~~~~E~~~~~p~-~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~ 193 (348)
T 1ek6_A 140 ----QYLPLDEAHPTGGC-TNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHA 193 (348)
T ss_dssp ----SSSSBCTTSCCCCC-SSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCT
T ss_pred ----CCCCcCCCCCCCCC-CCchHHHHHHHHHHHHHHHhcCCCcceEEEeeccccCCCc
Confidence 13567888764321 333433 333333 12 459999999999999964
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} | Back alignment and structure |
|---|
Probab=99.92 E-value=5.7e-25 Score=179.98 Aligned_cols=159 Identities=26% Similarity=0.245 Sum_probs=123.0
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccceEEe
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITNLFW 88 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~~ 88 (211)
+++||||| +||||++|+++|+ ++|++|++++|++... ..+++ ++.+|++|++.+.+++++ .+|+|||
T Consensus 3 ~~~ilVtG-aG~iG~~l~~~L~-----~~g~~V~~~~r~~~~~---~~~~~-~~~~Dl~d~~~~~~~~~~---~~d~vih 69 (286)
T 3gpi_A 3 LSKILIAG-CGDLGLELARRLT-----AQGHEVTGLRRSAQPM---PAGVQ-TLIADVTRPDTLASIVHL---RPEILVY 69 (286)
T ss_dssp CCCEEEEC-CSHHHHHHHHHHH-----HTTCCEEEEECTTSCC---CTTCC-EEECCTTCGGGCTTGGGG---CCSEEEE
T ss_pred CCcEEEEC-CCHHHHHHHHHHH-----HCCCEEEEEeCCcccc---ccCCc-eEEccCCChHHHHHhhcC---CCCEEEE
Confidence 36799999 5999999999999 6899999999987653 47889 999999999988887775 1799999
Q ss_pred ecccCCchhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCCCCCCCCC
Q 028258 89 VPLQVQESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPN 168 (211)
Q Consensus 89 ~a~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~~~~~~~~ 168 (211)
+|+....++...+++|+.++.++++++.+. ++++|+++||..+|+.. ...|++|+++. .|.
T Consensus 70 ~a~~~~~~~~~~~~~n~~~~~~ll~a~~~~-----~~~~~v~~SS~~vyg~~------------~~~~~~E~~~~--~p~ 130 (286)
T 3gpi_A 70 CVAASEYSDEHYRLSYVEGLRNTLSALEGA-----PLQHVFFVSSTGVYGQE------------VEEWLDEDTPP--IAK 130 (286)
T ss_dssp CHHHHHHC-----CCSHHHHHHHHHHTTTS-----CCCEEEEEEEGGGCCCC------------CSSEECTTSCC--CCC
T ss_pred eCCCCCCCHHHHHHHHHHHHHHHHHHHhhC-----CCCEEEEEcccEEEcCC------------CCCCCCCCCCC--CCC
Confidence 998765566677899999999999999875 67899999999999753 13567888874 344
Q ss_pred cchhHHHHHhh--cCCCceEEEecCCceEecCCC
Q 028258 169 FYYELEDVSAS--YSPAITYSVHRSSVIIGASPR 200 (211)
Q Consensus 169 ~~~~~e~~l~~--~~~~~~~~i~Rp~~i~G~~~~ 200 (211)
..|...|+..+ ... ++++++||+.+||+...
T Consensus 131 ~~Y~~sK~~~E~~~~~-~~~~ilR~~~v~G~~~~ 163 (286)
T 3gpi_A 131 DFSGKRMLEAEALLAA-YSSTILRFSGIYGPGRL 163 (286)
T ss_dssp SHHHHHHHHHHHHGGG-SSEEEEEECEEEBTTBC
T ss_pred ChhhHHHHHHHHHHhc-CCeEEEecccccCCCch
Confidence 44544333333 122 89999999999999765
|
| >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.91 E-value=6.2e-24 Score=177.11 Aligned_cols=166 Identities=13% Similarity=0.064 Sum_probs=128.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC------C-CCCCceeEEEeeCCCHHHHHHHHHhcc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW------F-PTALVDRYITFDALDPTDTALKLSLIS 80 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~------~-~~~~~~~~i~~Dl~d~~~~~~~~~~~~ 80 (211)
++++|||||||||||++|+++|+ ++|++|++++|++.... . ...+++ ++.+|++|++++.++++++.
T Consensus 13 ~~~~vlVTGatG~iG~~l~~~L~-----~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~~~~~~~~~~ 86 (335)
T 1rpn_A 13 MTRSALVTGITGQDGAYLAKLLL-----EKGYRVHGLVARRSSDTRWRLRELGIEGDIQ-YEDGDMADACSVQRAVIKAQ 86 (335)
T ss_dssp --CEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEECCCSSCCCHHHHHTTCGGGEE-EEECCTTCHHHHHHHHHHHC
T ss_pred cCCeEEEECCCChHHHHHHHHHH-----HCCCeEEEEeCCCccccccchhhccccCceE-EEECCCCCHHHHHHHHHHcC
Confidence 46889999999999999999999 68999999999865421 0 135688 99999999999999998864
Q ss_pred cccceEEeecccCC-----chhHHHHhhcHHHHHHHHHHHHhcCCCCCCc-eEEEEeecCeeeecccCCccccCCCCCCC
Q 028258 81 QEITNLFWVPLQVQ-----ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRL-RHVALLTGTKHYMGPIFDPSLAGQLMPYE 154 (211)
Q Consensus 81 ~~~~~v~~~a~~~~-----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~-~~~~~~s~~~~y~~~~~~~~~~g~~~~~~ 154 (211)
+|+|||+|+... .++...+++|+.++.++++++.+. ++ ++|+++||..+|+.. ..
T Consensus 87 --~d~Vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-----~~~~~~v~~SS~~v~g~~------------~~ 147 (335)
T 1rpn_A 87 --PQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQF-----SPETRFYQASTSEMFGLI------------QA 147 (335)
T ss_dssp --CSEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHH-----CTTSEEEEEEEGGGGCSC------------SS
T ss_pred --CCEEEECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHh-----CCCCeEEEEeCHHHhCCC------------CC
Confidence 799999998754 245667899999999999999886 44 799999999888742 13
Q ss_pred CCCcCCCCCCCCCCcchhH-----HHHHhh--cCCCceEEEecCCceEecCCC
Q 028258 155 VPFKEDSSRLPFPNFYYEL-----EDVSAS--YSPAITYSVHRSSVIIGASPR 200 (211)
Q Consensus 155 ~~~~e~~~~~~~~~~~~~~-----e~~l~~--~~~~~~~~i~Rp~~i~G~~~~ 200 (211)
.+++|+++. .|...|.. |.++.. ...+++++++||+.+||++..
T Consensus 148 ~~~~E~~~~--~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~ 198 (335)
T 1rpn_A 148 ERQDENTPF--YPRSPYGVAKLYGHWITVNYRESFGLHASSGILFNHESPLRG 198 (335)
T ss_dssp SSBCTTSCC--CCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSC
T ss_pred CCCCcccCC--CCCChhHHHHHHHHHHHHHHHHHcCCcEEEEeeCcccCCCCC
Confidence 467888764 23344443 333333 234899999999999998753
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.91 E-value=4.9e-24 Score=178.05 Aligned_cols=163 Identities=10% Similarity=0.064 Sum_probs=119.6
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-CCCCCceeEEEeeCCCHHHHHHHHHhcccccceEEe
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-FPTALVDRYITFDALDPTDTALKLSLISQEITNLFW 88 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~~ 88 (211)
++|||||||||||++|+++|+ ++|++|++++|++.... ....+++ ++.+|++|++++.+++++ +|+|||
T Consensus 14 M~ilVtGatG~iG~~l~~~L~-----~~g~~V~~~~r~~~~~~~l~~~~~~-~~~~Dl~d~~~~~~~~~~----~d~vih 83 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIR-----AAGHDLVLIHRPSSQIQRLAYLEPE-CRVAEMLDHAGLERALRG----LDGVIF 83 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHH-----HTTCEEEEEECTTSCGGGGGGGCCE-EEECCTTCHHHHHHHTTT----CSEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHH-----HCCCEEEEEecChHhhhhhccCCeE-EEEecCCCHHHHHHHHcC----CCEEEE
Confidence 489999999999999999999 68999999999876431 1224788 999999999999888875 789999
Q ss_pred ecccCC---chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCCCCCC
Q 028258 89 VPLQVQ---ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLP 165 (211)
Q Consensus 89 ~a~~~~---~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~~~~~ 165 (211)
+|+... .++...+++|+.++.++++++.+. ++++|+++||..+|+... + ...+ +|+++..+
T Consensus 84 ~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-----~~~~~v~~SS~~~~~~~~------~----~~~~-~E~~~~~p 147 (342)
T 2x4g_A 84 SAGYYPSRPRRWQEEVASALGQTNPFYAACLQA-----RVPRILYVGSAYAMPRHP------Q----GLPG-HEGLFYDS 147 (342)
T ss_dssp C------------CHHHHHHHHHHHHHHHHHHH-----TCSCEEEECCGGGSCCCT------T----SSCB-CTTCCCSS
T ss_pred CCccCcCCCCCHHHHHHHHHHHHHHHHHHHHHc-----CCCeEEEECCHHhhCcCC------C----CCCC-CCCCCCCc
Confidence 998643 245567899999999999999987 578999999999987431 0 0133 77776432
Q ss_pred CC--CcchhH-----HHHHhh--cCCCceEEEecCCceEecCC
Q 028258 166 FP--NFYYEL-----EDVSAS--YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 166 ~~--~~~~~~-----e~~l~~--~~~~~~~~i~Rp~~i~G~~~ 199 (211)
.. ...|.. |.++.+ .. +++++++||+.+||+..
T Consensus 148 ~~~~~~~Y~~sK~~~e~~~~~~~~~-g~~~~ilrp~~v~g~~~ 189 (342)
T 2x4g_A 148 LPSGKSSYVLCKWALDEQAREQARN-GLPVVIGIPGMVLGELD 189 (342)
T ss_dssp CCTTSCHHHHHHHHHHHHHHHHHHT-TCCEEEEEECEEECSCC
T ss_pred cccccChHHHHHHHHHHHHHHHhhc-CCcEEEEeCCceECCCC
Confidence 10 334443 344333 24 99999999999999875
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=8.6e-24 Score=179.82 Aligned_cols=169 Identities=14% Similarity=0.090 Sum_probs=126.4
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-CCCCCceeEEEeeCCCHHHHHHHHHhcccccceEE
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-FPTALVDRYITFDALDPTDTALKLSLISQEITNLF 87 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~ 87 (211)
+++|||||||||||++|+++|+ ++|++|++++|++.... ....+++ ++.+|++|++++.+++++ +|+||
T Consensus 29 ~~~vlVtGatG~iG~~l~~~L~-----~~g~~V~~~~r~~~~~~~~~~~~v~-~~~~Dl~d~~~~~~~~~~----~d~Vi 98 (379)
T 2c5a_A 29 NLKISITGAGGFIASHIARRLK-----HEGHYVIASDWKKNEHMTEDMFCDE-FHLVDLRVMENCLKVTEG----VDHVF 98 (379)
T ss_dssp CCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESSCCSSSCGGGTCSE-EEECCTTSHHHHHHHHTT----CSEEE
T ss_pred CCeEEEECCccHHHHHHHHHHH-----HCCCeEEEEECCCccchhhccCCce-EEECCCCCHHHHHHHhCC----CCEEE
Confidence 4789999999999999999999 68999999999876432 1235788 999999999999988875 78999
Q ss_pred eecccCC------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCC
Q 028258 88 WVPLQVQ------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDS 161 (211)
Q Consensus 88 ~~a~~~~------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~ 161 (211)
|+|+... .++...+++|+.++.++++++.+. ++++|+++||..+|+.... .. ....+++|++
T Consensus 99 h~A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~-----~~~~~V~~SS~~v~~~~~~-----~~--~~~~~~~E~~ 166 (379)
T 2c5a_A 99 NLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARIN-----GIKRFFYASSACIYPEFKQ-----LE--TTNVSLKESD 166 (379)
T ss_dssp ECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHT-----TCSEEEEEEEGGGSCGGGS-----SS--SSSCEECGGG
T ss_pred ECceecCcccccccCHHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEEeehheeCCCCC-----CC--ccCCCcCccc
Confidence 9998643 245667899999999999999876 5789999999999874311 00 0123466665
Q ss_pred CCCCCCCcchhH-----HHHHhh--cCCCceEEEecCCceEecCC
Q 028258 162 SRLPFPNFYYEL-----EDVSAS--YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 162 ~~~~~~~~~~~~-----e~~l~~--~~~~~~~~i~Rp~~i~G~~~ 199 (211)
+....|...|.. |.++.+ ...+++++++||+.+||+..
T Consensus 167 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~G~~~ 211 (379)
T 2c5a_A 167 AWPAEPQDAFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFG 211 (379)
T ss_dssp GSSBCCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTS
T ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHHHCCCEEEEEeCceeCcCC
Confidence 211233344443 333332 23589999999999999875
|
| >1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.91 E-value=1.2e-23 Score=178.31 Aligned_cols=170 Identities=18% Similarity=0.113 Sum_probs=126.1
Q ss_pred cccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC---CC----------CCCCceeEEEeeCCCH
Q 028258 3 KQDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG---WF----------PTALVDRYITFDALDP 69 (211)
Q Consensus 3 ~~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~---~~----------~~~~~~~~i~~Dl~d~ 69 (211)
.+...|+|+|||||||||||++|+++|+ ++|++|++++|++... .. ...+++ ++.+|++|+
T Consensus 18 ~~~~~M~~~vlVtGatG~iG~~l~~~L~-----~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~Dl~d~ 91 (375)
T 1t2a_A 18 YFQGHMRNVALITGITGQDGSYLAEFLL-----EKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMK-LHYGDLTDS 91 (375)
T ss_dssp ------CCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEECCCSSCCCTTTGGGC---------CEE-EEECCTTCH
T ss_pred hhHhhcCcEEEEECCCchHHHHHHHHHH-----HCCCEEEEEECCccccchhhHHHHhhhhccccCCCce-EEEccCCCH
Confidence 3445556889999999999999999999 6899999999976531 00 124688 999999999
Q ss_pred HHHHHHHHhcccccceEEeecccCCc-----hhHHHHhhcHHHHHHHHHHHHhcCCCCCCc---eEEEEeecCeeeeccc
Q 028258 70 TDTALKLSLISQEITNLFWVPLQVQE-----SEEVNIFKNSTMLKNVLSVLVSSNSGRSRL---RHVALLTGTKHYMGPI 141 (211)
Q Consensus 70 ~~~~~~~~~~~~~~~~v~~~a~~~~~-----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~---~~~~~~s~~~~y~~~~ 141 (211)
+++.++++++. +|+|||+|+.... ++...+++|+.++.++++++.+. .+ ++|+++||..+|+..
T Consensus 92 ~~~~~~~~~~~--~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~-----~~~~~~~iv~~SS~~~~~~~- 163 (375)
T 1t2a_A 92 TCLVKIINEVK--PTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTC-----GLINSVKFYQASTSELYGKV- 163 (375)
T ss_dssp HHHHHHHHHHC--CSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHT-----TCTTTCEEEEEEEGGGTCSC-
T ss_pred HHHHHHHHhcC--CCEEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHh-----CCCccceEEEecchhhhCCC-
Confidence 99999998764 7999999987542 34567899999999999999886 34 799999999888742
Q ss_pred CCccccCCCCCCCCCCcCCCCCCCCCCcchhHHH-----HHhh--cCCCceEEEecCCceEecCC
Q 028258 142 FDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELED-----VSAS--YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 142 ~~~~~~g~~~~~~~~~~e~~~~~~~~~~~~~~e~-----~l~~--~~~~~~~~i~Rp~~i~G~~~ 199 (211)
...|++|+++. .|...|...| ++.. ...+++++++||+.+||++.
T Consensus 164 -----------~~~~~~E~~~~--~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~~~gp~~ 215 (375)
T 1t2a_A 164 -----------QEIPQKETTPF--YPRSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRR 215 (375)
T ss_dssp -----------SSSSBCTTSCC--CCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTS
T ss_pred -----------CCCCCCccCCC--CCCChhHHHHHHHHHHHHHHHHHhCCCEEEEecccccCCCC
Confidence 13467888764 2334444333 3332 23589999999999999875
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.91 E-value=7.5e-24 Score=175.30 Aligned_cols=160 Identities=15% Similarity=0.162 Sum_probs=121.3
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC-CCCCCCCceeEEEeeCCCHHHHHHHHHhcccccceEEe
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP-GWFPTALVDRYITFDALDPTDTALKLSLISQEITNLFW 88 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~-~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~~ 88 (211)
|+|||||||||||++|+++|+ ++| .+++++|+... .......++ ++.+|++| +++.+++++ +|.|||
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~-----~~g-~~v~~~~~~~~~~~~~~~~~~-~~~~Dl~~-~~~~~~~~~----~d~vih 69 (313)
T 3ehe_A 2 SLIVVTGGAGFIGSHVVDKLS-----ESN-EIVVIDNLSSGNEEFVNEAAR-LVKADLAA-DDIKDYLKG----AEEVWH 69 (313)
T ss_dssp -CEEEETTTSHHHHHHHHHHT-----TTS-CEEEECCCSSCCGGGSCTTEE-EECCCTTT-SCCHHHHTT----CSEEEE
T ss_pred CEEEEECCCchHHHHHHHHHH-----hCC-CEEEEEcCCCCChhhcCCCcE-EEECcCCh-HHHHHHhcC----CCEEEE
Confidence 579999999999999999999 678 45555554432 222346788 99999999 888888874 789999
Q ss_pred ecccCC-----chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCCCC
Q 028258 89 VPLQVQ-----ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSR 163 (211)
Q Consensus 89 ~a~~~~-----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~~~ 163 (211)
+|+... .++...+++|+.++.++++++.+. ++++|+++||..+|+.+ ...|.+|+.+.
T Consensus 70 ~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~-----~~~~iv~~SS~~vyg~~------------~~~~~~E~~~~ 132 (313)
T 3ehe_A 70 IAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKA-----GVSRIVFTSTSTVYGEA------------KVIPTPEDYPT 132 (313)
T ss_dssp CCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHH-----TCCEEEEECCGGGGCSC------------SSSSBCTTSCC
T ss_pred CCCCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHc-----CCCeEEEeCchHHhCcC------------CCCCCCCCCCC
Confidence 998632 356778899999999999999887 57899999999999753 13567887764
Q ss_pred CCCCCcchhH-----HHHHhh--cCCCceEEEecCCceEecCCC
Q 028258 164 LPFPNFYYEL-----EDVSAS--YSPAITYSVHRSSVIIGASPR 200 (211)
Q Consensus 164 ~~~~~~~~~~-----e~~l~~--~~~~~~~~i~Rp~~i~G~~~~ 200 (211)
.|...|.. |.++.. ...+++++++||+.+||+...
T Consensus 133 --~~~~~Y~~sK~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~ 174 (313)
T 3ehe_A 133 --HPISLYGASKLACEALIESYCHTFDMQAWIYRFANVIGRRST 174 (313)
T ss_dssp --CCCSHHHHHHHHHHHHHHHHHHHTTCEEEEEECSCEESTTCC
T ss_pred --CCCCHHHHHHHHHHHHHHHHHHhcCCCEEEEeeccccCcCCC
Confidence 33444443 333333 346999999999999999753
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=4.6e-24 Score=179.41 Aligned_cols=162 Identities=17% Similarity=0.096 Sum_probs=126.1
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC--CC----------CCCceeEEEeeCCCHHHHHHHH
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW--FP----------TALVDRYITFDALDPTDTALKL 76 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~--~~----------~~~~~~~i~~Dl~d~~~~~~~~ 76 (211)
+++|||||||||||++|+++|+ +.|++|++++|++.... .. ..+++ ++.+|++|++++.+++
T Consensus 27 ~~~vlVtGatG~iG~~l~~~L~-----~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~~~~~~ 100 (352)
T 1sb8_A 27 PKVWLITGVAGFIGSNLLETLL-----KLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFK-FIQGDIRNLDDCNNAC 100 (352)
T ss_dssp CCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEE-EEECCTTSHHHHHHHH
T ss_pred CCeEEEECCCcHHHHHHHHHHH-----HCCCEEEEEeCCCccchhhHHHHhhhcccccCCceE-EEECCCCCHHHHHHHh
Confidence 4789999999999999999999 68999999999764210 00 25788 9999999999999888
Q ss_pred HhcccccceEEeecccCC-----chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCC
Q 028258 77 SLISQEITNLFWVPLQVQ-----ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLM 151 (211)
Q Consensus 77 ~~~~~~~~~v~~~a~~~~-----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~ 151 (211)
++ +|+|||+|+... .++...+++|+.++.++++++.+. ++++|+++||..+|+..
T Consensus 101 ~~----~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-----~~~~~v~~SS~~~~~~~----------- 160 (352)
T 1sb8_A 101 AG----VDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDA-----KVQSFTYAASSSTYGDH----------- 160 (352)
T ss_dssp TT----CSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-----TCSEEEEEEEGGGGTTC-----------
T ss_pred cC----CCEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEeccHHhcCCC-----------
Confidence 74 789999998754 245567899999999999999886 67899999999988742
Q ss_pred CCCCCCcCCCCCCCCCCcchhH-----HHHHhh--cCCCceEEEecCCceEecCC
Q 028258 152 PYEVPFKEDSSRLPFPNFYYEL-----EDVSAS--YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 152 ~~~~~~~e~~~~~~~~~~~~~~-----e~~l~~--~~~~~~~~i~Rp~~i~G~~~ 199 (211)
...|++|+++. .|...|.. |.++.. ...+++++++||+.+||+..
T Consensus 161 -~~~~~~E~~~~--~~~~~Y~~sK~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~ 212 (352)
T 1sb8_A 161 -PGLPKVEDTIG--KPLSPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQ 212 (352)
T ss_dssp -CCSSBCTTCCC--CCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTC
T ss_pred -CCCCCCCCCCC--CCCChhHHHHHHHHHHHHHHHHHcCCCEEEEEECceeCcCC
Confidence 13467788763 33444443 333332 23589999999999999875
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} | Back alignment and structure |
|---|
Probab=99.91 E-value=8e-24 Score=171.64 Aligned_cols=158 Identities=12% Similarity=-0.004 Sum_probs=124.4
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccceEEe
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITNLFW 88 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~~ 88 (211)
+|+|||||||||||++|+++|+ +.|++|++++|++.... ..+++ ++.+|++|++.+.+++++ +|+|||
T Consensus 2 ~~~ilVtGatG~iG~~l~~~L~-----~~g~~V~~~~r~~~~~~--~~~~~-~~~~Dl~d~~~~~~~~~~----~d~vi~ 69 (267)
T 3ay3_A 2 LNRLLVTGAAGGVGSAIRPHLG-----TLAHEVRLSDIVDLGAA--EAHEE-IVACDLADAQAVHDLVKD----CDGIIH 69 (267)
T ss_dssp EEEEEEESTTSHHHHHHGGGGG-----GTEEEEEECCSSCCCCC--CTTEE-ECCCCTTCHHHHHHHHTT----CSEEEE
T ss_pred CceEEEECCCCHHHHHHHHHHH-----hCCCEEEEEeCCCcccc--CCCcc-EEEccCCCHHHHHHHHcC----CCEEEE
Confidence 4689999999999999999999 68999999999876432 25678 999999999999988875 689999
Q ss_pred ecccCC-chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCCCCCCCC
Q 028258 89 VPLQVQ-ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFP 167 (211)
Q Consensus 89 ~a~~~~-~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~~~~~~~ 167 (211)
+|+... .++...+++|+.++.++++++.+. ++++|+++||..+|+... ...|++|+++.. |
T Consensus 70 ~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-----~~~~iv~~SS~~~~~~~~-----------~~~~~~E~~~~~--~ 131 (267)
T 3ay3_A 70 LGGVSVERPWNDILQANIIGAYNLYEAARNL-----GKPRIVFASSNHTIGYYP-----------RTTRIDTEVPRR--P 131 (267)
T ss_dssp CCSCCSCCCHHHHHHHTHHHHHHHHHHHHHT-----TCCEEEEEEEGGGSTTSB-----------TTSCBCTTSCCC--C
T ss_pred CCcCCCCCCHHHHHHHHHHHHHHHHHHHHHh-----CCCEEEEeCCHHHhCCCC-----------CCCCCCCCCCCC--C
Confidence 998753 356678899999999999999876 578999999998886421 135678887742 3
Q ss_pred CcchhH-----HHHHhh--cCCCceEEEecCCceEe
Q 028258 168 NFYYEL-----EDVSAS--YSPAITYSVHRSSVIIG 196 (211)
Q Consensus 168 ~~~~~~-----e~~l~~--~~~~~~~~i~Rp~~i~G 196 (211)
...|.. |.++.. +..+++++++||+.+|+
T Consensus 132 ~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~~ 167 (267)
T 3ay3_A 132 DSLYGLSKCFGEDLASLYYHKFDIETLNIRIGSCFP 167 (267)
T ss_dssp CSHHHHHHHHHHHHHHHHHHTTCCCEEEEEECBCSS
T ss_pred CChHHHHHHHHHHHHHHHHHHcCCCEEEEeceeecC
Confidence 333433 333332 35789999999999984
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=4.3e-23 Score=172.24 Aligned_cols=163 Identities=14% Similarity=0.106 Sum_probs=123.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC---CCCCCceeEEEeeCCCHHHHHHHHHhcccccc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW---FPTALVDRYITFDALDPTDTALKLSLISQEIT 84 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~---~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~ 84 (211)
.+++|||||||||||++|+++|+ ++|++|++++|+..... ....+++ ++.+|++|++++.++++... +|
T Consensus 19 ~~~~vlVTGasG~iG~~l~~~L~-----~~g~~V~~~~r~~~~~~~~~~~l~~v~-~~~~Dl~d~~~~~~~~~~~~--~D 90 (330)
T 2pzm_A 19 SHMRILITGGAGCLGSNLIEHWL-----PQGHEILVIDNFATGKREVLPPVAGLS-VIEGSVTDAGLLERAFDSFK--PT 90 (330)
T ss_dssp TCCEEEEETTTSHHHHHHHHHHG-----GGTCEEEEEECCSSSCGGGSCSCTTEE-EEECCTTCHHHHHHHHHHHC--CS
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-----HCCCEEEEEECCCccchhhhhccCCce-EEEeeCCCHHHHHHHHhhcC--CC
Confidence 35789999999999999999999 68999999999654321 1125788 99999999999999888543 79
Q ss_pred eEEeecccCCc----hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCC
Q 028258 85 NLFWVPLQVQE----SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKED 160 (211)
Q Consensus 85 ~v~~~a~~~~~----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~ 160 (211)
+|||+|+.... ++. +++|+.++.++++++.+. ++++|+++||..+|+.... ...|++|+
T Consensus 91 ~vih~A~~~~~~~~~~~~--~~~N~~~~~~l~~a~~~~-----~~~~iV~~SS~~~~~~~~~----------~~~~~~E~ 153 (330)
T 2pzm_A 91 HVVHSAAAYKDPDDWAED--AATNVQGSINVAKAASKA-----GVKRLLNFQTALCYGRPAT----------VPIPIDSP 153 (330)
T ss_dssp EEEECCCCCSCTTCHHHH--HHHHTHHHHHHHHHHHHH-----TCSEEEEEEEGGGGCSCSS----------SSBCTTCC
T ss_pred EEEECCccCCCccccChh--HHHHHHHHHHHHHHHHHc-----CCCEEEEecCHHHhCCCcc----------CCCCcCCC
Confidence 99999987543 232 789999999999999876 5789999999888864210 01266776
Q ss_pred CCCCCCCCcchhHHHHHhh---cCCCceEEEecCCceEecCC
Q 028258 161 SSRLPFPNFYYELEDVSAS---YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 161 ~~~~~~~~~~~~~e~~l~~---~~~~~~~~i~Rp~~i~G~~~ 199 (211)
+ .+...|...|...+ +..+++++++||+++|||+.
T Consensus 154 ~----~~~~~Y~~sK~~~e~~~~~~~~~~~~iR~~~v~gp~~ 191 (330)
T 2pzm_A 154 T----APFTSYGISKTAGEAFLMMSDVPVVSLRLANVTGPRL 191 (330)
T ss_dssp C----CCCSHHHHHHHHHHHHHHTCSSCEEEEEECEEECTTC
T ss_pred C----CCCChHHHHHHHHHHHHHHcCCCEEEEeeeeeECcCC
Confidence 6 12334444333333 23489999999999999985
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=4e-24 Score=176.61 Aligned_cols=159 Identities=16% Similarity=0.137 Sum_probs=123.0
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-CCCCCceeEEEeeCCCHHHHHHHHHhcccccceEEe
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-FPTALVDRYITFDALDPTDTALKLSLISQEITNLFW 88 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~~ 88 (211)
|+|||||||||||++|+++|+ ++|++|++++|++.... ....+++ ++.+|++|++ +.+++++ |+|||
T Consensus 1 m~vlVtGatG~iG~~l~~~L~-----~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~Dl~d~~-~~~~~~~-----d~vih 68 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLV-----ELGYEVVVVDNLSSGRREFVNPSAE-LHVRDLKDYS-WGAGIKG-----DVVFH 68 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-----HTTCEEEEECCCSSCCGGGSCTTSE-EECCCTTSTT-TTTTCCC-----SEEEE
T ss_pred CEEEEECCCChHHHHHHHHHH-----hCCCEEEEEeCCCCCchhhcCCCce-EEECccccHH-HHhhcCC-----CEEEE
Confidence 469999999999999999999 68999999999766422 2246788 9999999987 6555442 78999
Q ss_pred ecccCC-----chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCCCC
Q 028258 89 VPLQVQ-----ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSR 163 (211)
Q Consensus 89 ~a~~~~-----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~~~ 163 (211)
+|+... .++...+++|+.++.++++++.+. ++++|+++||..+|+.+ ...|++|+.+.
T Consensus 69 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-----~~~~iv~~SS~~vyg~~------------~~~~~~e~~~~ 131 (312)
T 3ko8_A 69 FAANPEVRLSTTEPIVHFNENVVATFNVLEWARQT-----GVRTVVFASSSTVYGDA------------DVIPTPEEEPY 131 (312)
T ss_dssp CCSSCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHH-----TCCEEEEEEEGGGGCSC------------SSSSBCTTSCC
T ss_pred CCCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEeCcHHHhCCC------------CCCCCCCCCCC
Confidence 998643 245677899999999999999887 57899999999999753 13577888764
Q ss_pred CCCCCcchhH-----HHHHhh--cCCCceEEEecCCceEecCC
Q 028258 164 LPFPNFYYEL-----EDVSAS--YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 164 ~~~~~~~~~~-----e~~l~~--~~~~~~~~i~Rp~~i~G~~~ 199 (211)
.|...|.. |+++.. ...+++++++||+.+||+..
T Consensus 132 --~p~~~Y~~sK~~~e~~~~~~~~~~g~~~~~lrp~~v~g~~~ 172 (312)
T 3ko8_A 132 --KPISVYGAAKAAGEVMCATYARLFGVRCLAVRYANVVGPRL 172 (312)
T ss_dssp --CCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTC
T ss_pred --CCCChHHHHHHHHHHHHHHHHHHhCCCEEEEeeccccCcCC
Confidence 33444443 333333 23589999999999999975
|
| >2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.91 E-value=2.8e-23 Score=173.21 Aligned_cols=162 Identities=12% Similarity=0.126 Sum_probs=122.6
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCC--cEEEEEeCCCCCC------CC-CCCCceeEEEeeCCCHHHHHHHHHhcc
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSP--WKVYGAARRPPPG------WF-PTALVDRYITFDALDPTDTALKLSLIS 80 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g--~~V~~~~R~~~~~------~~-~~~~~~~~i~~Dl~d~~~~~~~~~~~~ 80 (211)
++|||||||||||++|+++|+ ++| ++|++++|+.... .. ...+++ ++.+|++|++.+.+++.+
T Consensus 4 m~vlVTGatG~iG~~l~~~L~-----~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~~~~~~~~-- 75 (336)
T 2hun_A 4 MKLLVTGGMGFIGSNFIRYIL-----EKHPDWEVINIDKLGYGSNPANLKDLEDDPRYT-FVKGDVADYELVKELVRK-- 75 (336)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-----HHCTTCEEEEEECCCTTCCGGGGTTTTTCTTEE-EEECCTTCHHHHHHHHHT--
T ss_pred CeEEEECCCchHHHHHHHHHH-----HhCCCCEEEEEecCcccCchhHHhhhccCCceE-EEEcCCCCHHHHHHHhhC--
Confidence 469999999999999999999 454 9999999865211 01 135788 999999999999888854
Q ss_pred cccceEEeecccCCc-----hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCC
Q 028258 81 QEITNLFWVPLQVQE-----SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEV 155 (211)
Q Consensus 81 ~~~~~v~~~a~~~~~-----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~ 155 (211)
+|+|||+|+.... ++...+++|+.++.++++++... . ..++|+++||..+|+... ..
T Consensus 76 --~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~---~-~~~~iv~~SS~~vyg~~~------------~~ 137 (336)
T 2hun_A 76 --VDGVVHLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRE---N-PEVRFVHVSTDEVYGDIL------------KG 137 (336)
T ss_dssp --CSEEEECCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHH---C-TTSEEEEEEEGGGGCCCS------------SS
T ss_pred --CCEEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHh---C-CCcEEEEeccHHHHCCCC------------CC
Confidence 7899999987542 44567899999999999999986 2 236999999998887421 34
Q ss_pred CCcCCCCCCCCCCcchhH-----HHHHhh--cCCCceEEEecCCceEecCC
Q 028258 156 PFKEDSSRLPFPNFYYEL-----EDVSAS--YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 156 ~~~e~~~~~~~~~~~~~~-----e~~l~~--~~~~~~~~i~Rp~~i~G~~~ 199 (211)
+++|+.+. .+...|.. |.++.. ...+++++++||+.+||+..
T Consensus 138 ~~~E~~~~--~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~g~~~ 186 (336)
T 2hun_A 138 SFTENDRL--MPSSPYSATKAASDMLVLGWTRTYNLNASITRCTNNYGPYQ 186 (336)
T ss_dssp CBCTTBCC--CCCSHHHHHHHHHHHHHHHHHHHTTCEEEEEEECEEESTTC
T ss_pred CcCCCCCC--CCCCccHHHHHHHHHHHHHHHHHhCCCEEEEeeeeeeCcCC
Confidence 67887764 23334443 333333 23689999999999999875
|
| >1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.8e-23 Score=175.12 Aligned_cols=171 Identities=12% Similarity=0.062 Sum_probs=124.1
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCC--CcEEEEEeCCCCCC---C---CCCCCceeEEEeeCCCHHHHHHHHHhccc
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGS--PWKVYGAARRPPPG---W---FPTALVDRYITFDALDPTDTALKLSLISQ 81 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~--g~~V~~~~R~~~~~---~---~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~ 81 (211)
++|||||||||||++|+++|+ ++ |++|++++|++... . ....+++ ++.+|++|++.+.+++++
T Consensus 5 ~~vlVTGatG~iG~~l~~~L~-----~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~~~~~~~~--- 75 (348)
T 1oc2_A 5 KNIIVTGGAGFIGSNFVHYVY-----NNHPDVHVTVLDKLTYAGNKANLEAILGDRVE-LVVGDIADAELVDKLAAK--- 75 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHH-----HHCTTCEEEEEECCCTTCCGGGTGGGCSSSEE-EEECCTTCHHHHHHHHTT---
T ss_pred cEEEEeCCccHHHHHHHHHHH-----HhCCCCEEEEEeCCCCCCChhHHhhhccCCeE-EEECCCCCHHHHHHHhhc---
Confidence 689999999999999999999 45 89999999975321 0 1135788 999999999999998876
Q ss_pred ccceEEeecccCCc-----hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccC-CccccCCCCCCCC
Q 028258 82 EITNLFWVPLQVQE-----SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIF-DPSLAGQLMPYEV 155 (211)
Q Consensus 82 ~~~~v~~~a~~~~~-----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~-~~~~~g~~~~~~~ 155 (211)
+|+|||+|+.... ++...+++|+.++.++++++.+. ++ +|+++||..+|+.... ++ ..+.......
T Consensus 76 -~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-----~~-~~v~~SS~~vyg~~~~~~~-~~~~~~~~~~ 147 (348)
T 1oc2_A 76 -ADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKY-----DI-RFHHVSTDEVYGDLPLRED-LPGHGEGPGE 147 (348)
T ss_dssp -CSEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHH-----TC-EEEEEEEGGGGCCBCCGGG-STTTTCSTTS
T ss_pred -CCEEEECCcccCccchhhCHHHHHHHHHHHHHHHHHHHHHh-----CC-eEEEecccceeCCCccccc-ccccccccCC
Confidence 5899999987542 34567899999999999999987 45 8999999999974210 00 0000000125
Q ss_pred CCcCCCCCCCCCCcchhH-----HHHHhh--cCCCceEEEecCCceEecCC
Q 028258 156 PFKEDSSRLPFPNFYYEL-----EDVSAS--YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 156 ~~~e~~~~~~~~~~~~~~-----e~~l~~--~~~~~~~~i~Rp~~i~G~~~ 199 (211)
+++|+++. .+...|.. |.++.. ...+++++++||+.+||+..
T Consensus 148 ~~~E~~~~--~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilrp~~v~G~~~ 196 (348)
T 1oc2_A 148 KFTAETNY--NPSSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQ 196 (348)
T ss_dssp SBCTTSCC--CCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTC
T ss_pred CcCCCCCC--CCCCccHHHHHHHHHHHHHHHHHhCCCEEEEeeceeeCCCC
Confidence 67887764 23334443 333333 23489999999999999875
|
| >4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.90 E-value=6.7e-24 Score=174.64 Aligned_cols=158 Identities=16% Similarity=0.119 Sum_probs=118.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccceEE
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITNLF 87 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~ 87 (211)
++++|||||||||||++|+++|+ ++|+ +... ....++ ++.+|++|++.+.+++++.+ +|+||
T Consensus 5 ~~~~vlVtGatG~iG~~l~~~L~-----~~g~------~~~~----~~~~~~-~~~~D~~d~~~~~~~~~~~~--~d~Vi 66 (319)
T 4b8w_A 5 QSMRILVTGGSGLVGKAIQKVVA-----DGAG------LPGE----DWVFVS-SKDADLTDTAQTRALFEKVQ--PTHVI 66 (319)
T ss_dssp CCCEEEEETCSSHHHHHHHHHHH-----TTTC------CTTC----EEEECC-TTTCCTTSHHHHHHHHHHSC--CSEEE
T ss_pred cCCeEEEECCCcHHHHHHHHHHH-----hcCC------cccc----cccccC-ceecccCCHHHHHHHHhhcC--CCEEE
Confidence 35789999999999999999999 5777 2111 123455 66899999999999998864 79999
Q ss_pred eecccCC------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCC
Q 028258 88 WVPLQVQ------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDS 161 (211)
Q Consensus 88 ~~a~~~~------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~ 161 (211)
|+|+... .++...+++|+.++.++++++.+. ++++|+++||..+|+.+ ...|++|++
T Consensus 67 h~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~-----~~~~~v~~SS~~vyg~~------------~~~~~~E~~ 129 (319)
T 4b8w_A 67 HLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEV-----GARKVVSCLSTCIFPDK------------TTYPIDETM 129 (319)
T ss_dssp ECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHT-----TCSEEEEECCGGGSCSS------------CCSSBCGGG
T ss_pred ECceecccccccccCHHHHHHHHHHHHHHHHHHHHHc-----CCCeEEEEcchhhcCCC------------CCCCccccc
Confidence 9998754 245567899999999999999887 67899999999999753 145778876
Q ss_pred CCC--CCCCc-chhHHH-----HHhh--cCCCceEEEecCCceEecCCC
Q 028258 162 SRL--PFPNF-YYELED-----VSAS--YSPAITYSVHRSSVIIGASPR 200 (211)
Q Consensus 162 ~~~--~~~~~-~~~~e~-----~l~~--~~~~~~~~i~Rp~~i~G~~~~ 200 (211)
+.. +.|.. .|...| ++.. +..+++++++||+.+||++..
T Consensus 130 ~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~Gp~~~ 178 (319)
T 4b8w_A 130 IHNGPPHNSNFGYSYAKRMIDVQNRAYFQQYGCTFTAVIPTNVFGPHDN 178 (319)
T ss_dssp GGBSCCCSSSHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCC
T ss_pred cccCCCCCCcchHHHHHHHHHHHHHHHHHhhCCCEEEEeeccccCCCCC
Confidence 321 22333 244333 3333 246899999999999999753
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=2.1e-23 Score=172.41 Aligned_cols=163 Identities=14% Similarity=0.042 Sum_probs=123.2
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-CCCCCceeEEEeeCCCHHHHHHHHHhcccccceEEee
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-FPTALVDRYITFDALDPTDTALKLSLISQEITNLFWV 89 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~~~ 89 (211)
+|||||||||||++++++|+ ++|++|++++|...... ....+++ ++.+|++|++++.++++... +|+|+|+
T Consensus 2 ~vlVTGatG~iG~~l~~~L~-----~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~--~d~vi~~ 73 (311)
T 2p5y_A 2 RVLVTGGAGFIGSHIVEDLL-----ARGLEVAVLDNLATGKRENVPKGVP-FFRVDLRDKEGVERAFREFR--PTHVSHQ 73 (311)
T ss_dssp EEEEETTTSHHHHHHHHHHH-----TTTCEEEEECCCSSCCGGGSCTTCC-EECCCTTCHHHHHHHHHHHC--CSEEEEC
T ss_pred EEEEEeCCcHHHHHHHHHHH-----HCCCEEEEEECCCcCchhhcccCeE-EEECCCCCHHHHHHHHHhcC--CCEEEEC
Confidence 69999999999999999999 68999999998543211 1124678 89999999999998887543 7999999
Q ss_pred cccCCc-----hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC-eeeecccCCccccCCCCCCCCCCcCCCCC
Q 028258 90 PLQVQE-----SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT-KHYMGPIFDPSLAGQLMPYEVPFKEDSSR 163 (211)
Q Consensus 90 a~~~~~-----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~-~~y~~~~~~~~~~g~~~~~~~~~~e~~~~ 163 (211)
|+.... ++...+++|+.++.++++++.+. ++++|+++||. .+|+... ...|.+|+.+.
T Consensus 74 a~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~-----~~~~iv~~SS~~~~~g~~~-----------~~~~~~E~~~~ 137 (311)
T 2p5y_A 74 AAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQY-----GVEKLVFASTGGAIYGEVP-----------EGERAEETWPP 137 (311)
T ss_dssp CSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-----TCSEEEEEEEHHHHHCCCC-----------TTCCBCTTSCC
T ss_pred ccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHh-----CCCEEEEeCCChhhcCCCC-----------CCCCcCCCCCC
Confidence 987542 35567899999999999999876 57899999997 8886411 13467777763
Q ss_pred CCCCCcchhH-----HHHHhh--cCCCceEEEecCCceEecCC
Q 028258 164 LPFPNFYYEL-----EDVSAS--YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 164 ~~~~~~~~~~-----e~~l~~--~~~~~~~~i~Rp~~i~G~~~ 199 (211)
.|...|.. |.++.. ...+++++++||+.+||+..
T Consensus 138 --~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~Gp~~ 178 (311)
T 2p5y_A 138 --RPKSPYAASKAAFEHYLSVYGQSYGLKWVSLRYGNVYGPRQ 178 (311)
T ss_dssp --CCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTC
T ss_pred --CCCChHHHHHHHHHHHHHHHHHHcCCCEEEEeeccccCcCC
Confidence 23333433 333332 23589999999999999875
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.90 E-value=1.1e-23 Score=172.15 Aligned_cols=152 Identities=14% Similarity=0.169 Sum_probs=118.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccceEE
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITNLF 87 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~ 87 (211)
|+++|||||||||||++++++|+ ++|++|++++|. .+|++|++.+.++++... +|+||
T Consensus 4 M~m~ilVtGatG~iG~~l~~~L~-----~~g~~V~~~~r~---------------~~D~~d~~~~~~~~~~~~--~d~vi 61 (287)
T 3sc6_A 4 MKERVIITGANGQLGKQLQEELN-----PEEYDIYPFDKK---------------LLDITNISQVQQVVQEIR--PHIII 61 (287)
T ss_dssp -CEEEEEESTTSHHHHHHHHHSC-----TTTEEEEEECTT---------------TSCTTCHHHHHHHHHHHC--CSEEE
T ss_pred ceeEEEEECCCCHHHHHHHHHHH-----hCCCEEEEeccc---------------ccCCCCHHHHHHHHHhcC--CCEEE
Confidence 33489999999999999999999 689999999982 278999999999998754 79999
Q ss_pred eecccCC-----chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCCC
Q 028258 88 WVPLQVQ-----ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSS 162 (211)
Q Consensus 88 ~~a~~~~-----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~~ 162 (211)
|+|+... .++...+++|+.++.++++++.+. ++ +|+++||..+|+.. ...|++|+++
T Consensus 62 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~-~~v~~SS~~vy~~~------------~~~~~~E~~~ 123 (287)
T 3sc6_A 62 HCAAYTKVDQAEKERDLAYVINAIGARNVAVASQLV-----GA-KLVYISTDYVFQGD------------RPEGYDEFHN 123 (287)
T ss_dssp ECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHH-----TC-EEEEEEEGGGSCCC------------CSSCBCTTSC
T ss_pred ECCcccChHHHhcCHHHHHHHHHHHHHHHHHHHHHc-----CC-eEEEEchhhhcCCC------------CCCCCCCCCC
Confidence 9998765 255677899999999999999987 44 58999999999753 1467888887
Q ss_pred CCCCCCcchhHHHHHhh---cCCCceEEEecCCceEecCCCC
Q 028258 163 RLPFPNFYYELEDVSAS---YSPAITYSVHRSSVIIGASPRS 201 (211)
Q Consensus 163 ~~~~~~~~~~~e~~l~~---~~~~~~~~i~Rp~~i~G~~~~~ 201 (211)
. .|...|...|...+ +....+++++||+.+||+...+
T Consensus 124 ~--~p~~~Y~~sK~~~E~~~~~~~~~~~ilR~~~v~G~~~~~ 163 (287)
T 3sc6_A 124 P--APINIYGASKYAGEQFVKELHNKYFIVRTSWLYGKYGNN 163 (287)
T ss_dssp C--CCCSHHHHHHHHHHHHHHHHCSSEEEEEECSEECSSSCC
T ss_pred C--CCCCHHHHHHHHHHHHHHHhCCCcEEEeeeeecCCCCCc
Confidence 4 34444544443333 2234478999999999987544
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A | Back alignment and structure |
|---|
Probab=99.90 E-value=7.9e-24 Score=176.81 Aligned_cols=177 Identities=17% Similarity=0.138 Sum_probs=118.4
Q ss_pred CccccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCC--------CCCCceeEEEeeCCCHHHH
Q 028258 1 MEKQDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF--------PTALVDRYITFDALDPTDT 72 (211)
Q Consensus 1 ~~~~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~--------~~~~~~~~i~~Dl~d~~~~ 72 (211)
|...+..|+|+|||||||||||++|+++|+ ++||+|+++.|++..... ...+++ ++.+|++|++.+
T Consensus 1 ~~~~~~~~~~~vlVTGatGfIG~~l~~~Ll-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~~ 74 (338)
T 2rh8_A 1 MATQHPIGKKTACVVGGTGFVASLLVKLLL-----QKGYAVNTTVRDPDNQKKVSHLLELQELGDLK-IFRADLTDELSF 74 (338)
T ss_dssp --------CCEEEEECTTSHHHHHHHHHHH-----HTTCEEEEEESCTTCTTTTHHHHHHGGGSCEE-EEECCTTTSSSS
T ss_pred CCcCcCCCCCEEEEECCchHHHHHHHHHHH-----HCCCEEEEEEcCcchhhhHHHHHhcCCCCcEE-EEecCCCChHHH
Confidence 344444457899999999999999999999 689999999997653210 124678 899999999888
Q ss_pred HHHHHhcccccceEEeecccCCc---hh-HHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe-eeecccCCcccc
Q 028258 73 ALKLSLISQEITNLFWVPLQVQE---SE-EVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK-HYMGPIFDPSLA 147 (211)
Q Consensus 73 ~~~~~~~~~~~~~v~~~a~~~~~---~~-~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~-~y~~~~~~~~~~ 147 (211)
.+++++ +|+|||+|+.... ++ .+.+++|+.++.++++++.+. . ++++|+++||.. +|+.+. .
T Consensus 75 ~~~~~~----~D~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~---~-~v~r~V~~SS~~~~~~~~~-----~ 141 (338)
T 2rh8_A 75 EAPIAG----CDFVFHVATPVHFASEDPENDMIKPAIQGVVNVMKACTRA---K-SVKRVILTSSAAAVTINQL-----D 141 (338)
T ss_dssp HHHHTT----CSEEEEESSCCCC---------CHHHHHHHHHHHHHHHHC---T-TCCEEEEECCHHHHHHHHH-----T
T ss_pred HHHHcC----CCEEEEeCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHc---C-CcCEEEEEecHHHeecCCc-----C
Confidence 888875 6899999986432 22 236789999999999999876 2 378999999876 443221 0
Q ss_pred CCCCCCCCCCcCCCCCC-------CCCCc-c----hhHHHHHhh--cCCCceEEEecCCceEecCCC
Q 028258 148 GQLMPYEVPFKEDSSRL-------PFPNF-Y----YELEDVSAS--YSPAITYSVHRSSVIIGASPR 200 (211)
Q Consensus 148 g~~~~~~~~~~e~~~~~-------~~~~~-~----~~~e~~l~~--~~~~~~~~i~Rp~~i~G~~~~ 200 (211)
+ ...+++|+.+.. .++.+ | ...|.++.+ +..+++++++||+.+||+...
T Consensus 142 ~----~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~ 204 (338)
T 2rh8_A 142 G----TGLVVDEKNWTDIEFLTSAKPPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGSSLT 204 (338)
T ss_dssp C----SCCCCCTTTTTCC-------CCCCCCTTSCCHHHHHHHHHHHHHTCCEEEEEECEEESCCSS
T ss_pred C----CCcccChhhccchhhccccCCccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCC
Confidence 1 012455654211 00111 3 234555444 235899999999999999753
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=4.6e-23 Score=172.03 Aligned_cols=164 Identities=17% Similarity=0.149 Sum_probs=127.4
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCC-------CCCCceeEEEeeCCCHHHHHHHHHhccc
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF-------PTALVDRYITFDALDPTDTALKLSLISQ 81 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~-------~~~~~~~~i~~Dl~d~~~~~~~~~~~~~ 81 (211)
+|+|||||||||||++++++|+ ++|++|++++|++..... ...+++ ++.+|++|++++.++++++.
T Consensus 3 ~~~vlVtGatG~iG~~l~~~L~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~~~~~~~~~~- 75 (345)
T 2z1m_A 3 GKRALITGIRGQDGAYLAKLLL-----EKGYEVYGADRRSGEFASWRLKELGIENDVK-IIHMDLLEFSNIIRTIEKVQ- 75 (345)
T ss_dssp CCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEECSCCSTTTTHHHHHTTCTTTEE-ECCCCTTCHHHHHHHHHHHC-
T ss_pred CCEEEEECCCChHHHHHHHHHH-----HCCCEEEEEECCCcccccccHhhccccCcee-EEECCCCCHHHHHHHHHhcC-
Confidence 4789999999999999999999 689999999998754210 124688 89999999999999998864
Q ss_pred ccceEEeecccCC-----chhHHHHhhcHHHHHHHHHHHHhcCCCCCCc-eEEEEeecCeeeecccCCccccCCCCCCCC
Q 028258 82 EITNLFWVPLQVQ-----ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRL-RHVALLTGTKHYMGPIFDPSLAGQLMPYEV 155 (211)
Q Consensus 82 ~~~~v~~~a~~~~-----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~-~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~ 155 (211)
+|+|||+|+... .++...+++|+.++.++++++.+. ++ ++|+++||..+||... ..
T Consensus 76 -~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-----~~~~~iv~~SS~~vyg~~~------------~~ 137 (345)
T 2z1m_A 76 -PDEVYNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTV-----KPDTKFYQASTSEMFGKVQ------------EI 137 (345)
T ss_dssp -CSEEEECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHH-----CTTCEEEEEEEGGGGCSCS------------SS
T ss_pred -CCEEEECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHh-----CCCceEEEEechhhcCCCC------------CC
Confidence 799999998753 246677899999999999999876 44 7999999999997531 34
Q ss_pred CCcCCCCCCCCCCcchhH-----HHHHhh--cCCCceEEEecCCceEecCC
Q 028258 156 PFKEDSSRLPFPNFYYEL-----EDVSAS--YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 156 ~~~e~~~~~~~~~~~~~~-----e~~l~~--~~~~~~~~i~Rp~~i~G~~~ 199 (211)
|++|+.+. .+...|.. |.++.. ...+++++++|+..+|||+.
T Consensus 138 ~~~e~~~~--~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~ 186 (345)
T 2z1m_A 138 PQTEKTPF--YPRSPYAVAKLFGHWITVNYREAYNMFACSGILFNHESPLR 186 (345)
T ss_dssp SBCTTSCC--CCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTS
T ss_pred CCCccCCC--CCCChhHHHHHHHHHHHHHHHHHhCCceEeeeeeeecCCCC
Confidence 67777763 23334443 333332 23478999999999999975
|
| >1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=4.5e-23 Score=175.13 Aligned_cols=166 Identities=17% Similarity=0.141 Sum_probs=126.1
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC---CCC---------CC-CceeEEEeeCCCHHHHH
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG---WFP---------TA-LVDRYITFDALDPTDTA 73 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~---~~~---------~~-~~~~~i~~Dl~d~~~~~ 73 (211)
.|+|+|||||||||||++|+++|+ +.|++|++++|++... ... .+ +++ ++.+|++|++++.
T Consensus 26 ~M~k~vlVtGatG~IG~~l~~~L~-----~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~~~ 99 (381)
T 1n7h_A 26 EPRKIALITGITGQDGSYLTEFLL-----GKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMK-LHYADLTDASSLR 99 (381)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEECCCSSCCCTTTTTTC--------CCEE-EEECCTTCHHHHH
T ss_pred hhCCeEEEEcCCchHHHHHHHHHH-----HCCCEEEEEecCCccccchhhhhhhhccccccccceE-EEECCCCCHHHHH
Confidence 345789999999999999999999 6899999999976531 011 12 788 9999999999999
Q ss_pred HHHHhcccccceEEeecccCCc-----hhHHHHhhcHHHHHHHHHHHHhcCCCCCCce-----EEEEeecCeeeecccCC
Q 028258 74 LKLSLISQEITNLFWVPLQVQE-----SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLR-----HVALLTGTKHYMGPIFD 143 (211)
Q Consensus 74 ~~~~~~~~~~~~v~~~a~~~~~-----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~-----~~~~~s~~~~y~~~~~~ 143 (211)
++++++. +|+|||+|+.... ++...+++|+.++.++++++.+. .++ +|+++||..+|+..
T Consensus 100 ~~~~~~~--~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~-----~~~~~~~~~~v~~SS~~vyg~~--- 169 (381)
T 1n7h_A 100 RWIDVIK--PDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSH-----TIDSGRTVKYYQAGSSEMFGST--- 169 (381)
T ss_dssp HHHHHHC--CSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHH-----HHHHCCCCEEEEEEEGGGGTTS---
T ss_pred HHHHhcC--CCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHh-----CCccCCccEEEEeCcHHHhCCC---
Confidence 9998864 7999999987542 35567899999999999999876 455 89999999888742
Q ss_pred ccccCCCCCCCCCCcCCCCCCCCCCcchhHHH-----HHhh--cCCCceEEEecCCceEecCCC
Q 028258 144 PSLAGQLMPYEVPFKEDSSRLPFPNFYYELED-----VSAS--YSPAITYSVHRSSVIIGASPR 200 (211)
Q Consensus 144 ~~~~g~~~~~~~~~~e~~~~~~~~~~~~~~e~-----~l~~--~~~~~~~~i~Rp~~i~G~~~~ 200 (211)
.. +++|+++. .|...|...| ++.. ...+++++++|+..+|||+..
T Consensus 170 ---------~~-~~~E~~~~--~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~ 221 (381)
T 1n7h_A 170 ---------PP-PQSETTPF--HPRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRG 221 (381)
T ss_dssp ---------CS-SBCTTSCC--CCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSC
T ss_pred ---------CC-CCCCCCCC--CCCCchHHHHHHHHHHHHHHHHHhCCcEEEEEeCceeCCCCC
Confidence 12 67787764 2344444333 3332 234889999999999999753
|
| >1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=4.3e-23 Score=172.30 Aligned_cols=160 Identities=16% Similarity=0.103 Sum_probs=122.6
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCC---C---cEEEEEeCCCCCC---C----CCCCCceeEEEeeCCCHHHHHHHHH
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGS---P---WKVYGAARRPPPG---W----FPTALVDRYITFDALDPTDTALKLS 77 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~---g---~~V~~~~R~~~~~---~----~~~~~~~~~i~~Dl~d~~~~~~~~~ 77 (211)
+|||||||||||++|+++|+ ++ | ++|++++|+.... . ....+++ ++.+|++|++.+.+++.
T Consensus 2 ~vlVTGatG~iG~~l~~~L~-----~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~~~~~~~ 75 (337)
T 1r6d_A 2 RLLVTGGAGFIGSHFVRQLL-----AGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLR-FVHGDIRDAGLLARELR 75 (337)
T ss_dssp EEEEETTTSHHHHHHHHHHH-----HTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEE-EEECCTTCHHHHHHHTT
T ss_pred eEEEECCccHHHHHHHHHHH-----hhhcCCCCceEEEEEECCCccCchhhhhhcccCCCeE-EEEcCCCCHHHHHHHhc
Confidence 69999999999999999999 44 7 9999999965311 0 0125788 99999999999888875
Q ss_pred hcccccceEEeecccCCc-----hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCC
Q 028258 78 LISQEITNLFWVPLQVQE-----SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMP 152 (211)
Q Consensus 78 ~~~~~~~~v~~~a~~~~~-----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~ 152 (211)
+ +|+|||+|+.... ++...+++|+.++.++++++.+. ++++|+++||..+|+...
T Consensus 76 ~----~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~-----~~~~~v~~SS~~vyg~~~----------- 135 (337)
T 1r6d_A 76 G----VDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDA-----GVGRVVHVSTNQVYGSID----------- 135 (337)
T ss_dssp T----CCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHT-----TCCEEEEEEEGGGGCCCS-----------
T ss_pred C----CCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEecchHHhCCCC-----------
Confidence 4 7899999987542 34567899999999999999986 578999999998887421
Q ss_pred CCCCCcCCCCCCCCCCcchhH-----HHHHhh--cCCCceEEEecCCceEecCC
Q 028258 153 YEVPFKEDSSRLPFPNFYYEL-----EDVSAS--YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 153 ~~~~~~e~~~~~~~~~~~~~~-----e~~l~~--~~~~~~~~i~Rp~~i~G~~~ 199 (211)
..+++|+.+. .|...|.. |.++.. ...+++++++||+.+||+..
T Consensus 136 -~~~~~E~~~~--~~~~~Y~~sK~~~e~~~~~~~~~~g~~~~ilrp~~v~G~~~ 186 (337)
T 1r6d_A 136 -SGSWTESSPL--EPNSPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQ 186 (337)
T ss_dssp -SSCBCTTSCC--CCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTC
T ss_pred -CCCCCCCCCC--CCCCchHHHHHHHHHHHHHHHHHHCCCEEEEEeeeeECCCC
Confidence 3467787764 23344443 333333 23589999999999999975
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A | Back alignment and structure |
|---|
Probab=99.90 E-value=1.1e-23 Score=174.30 Aligned_cols=157 Identities=13% Similarity=0.226 Sum_probs=98.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccceEE
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITNLF 87 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~ 87 (211)
|+|+|||||||||||++|+++|+ ++|++|++++|+... + . ++.+|++|++++.+++++.. +|+||
T Consensus 1 m~~~vlVtGatG~iG~~l~~~L~-----~~g~~V~~~~r~~~~-----~--~-~~~~Dl~d~~~~~~~~~~~~--~d~vi 65 (315)
T 2ydy_A 1 MNRRVLVTGATGLLGRAVHKEFQ-----QNNWHAVGCGFRRAR-----P--K-FEQVNLLDSNAVHHIIHDFQ--PHVIV 65 (315)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHH-----TTTCEEEEEC--------------------------CHHHHHHHC--CSEEE
T ss_pred CCCeEEEECCCcHHHHHHHHHHH-----hCCCeEEEEccCCCC-----C--C-eEEecCCCHHHHHHHHHhhC--CCEEE
Confidence 35789999999999999999999 689999999987543 1 2 66899999998888888754 79999
Q ss_pred eecccCC-----chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCCC
Q 028258 88 WVPLQVQ-----ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSS 162 (211)
Q Consensus 88 ~~a~~~~-----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~~ 162 (211)
|+|+... .++...+++|+.++.++++++.+. +. +|+++||..+|+.. ..|++|+++
T Consensus 66 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-----~~-~~v~~SS~~v~~~~-------------~~~~~E~~~ 126 (315)
T 2ydy_A 66 HCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAV-----GA-FLIYISSDYVFDGT-------------NPPYREEDI 126 (315)
T ss_dssp ECC-------------------CHHHHHHHHHHHHH-----TC-EEEEEEEGGGSCSS-------------SCSBCTTSC
T ss_pred ECCcccChhhhhcCHHHHHHHHHHHHHHHHHHHHHc-----CC-eEEEEchHHHcCCC-------------CCCCCCCCC
Confidence 9998743 245567899999999999999987 34 88999998888641 356788876
Q ss_pred CCCCCCcchhHHHHHhh---cCCCceEEEecCCceEecCCC
Q 028258 163 RLPFPNFYYELEDVSAS---YSPAITYSVHRSSVIIGASPR 200 (211)
Q Consensus 163 ~~~~~~~~~~~e~~l~~---~~~~~~~~i~Rp~~i~G~~~~ 200 (211)
. .|...|...|...+ +..+++++++||+.|||+...
T Consensus 127 ~--~~~~~Y~~sK~~~e~~~~~~~~~~~~lR~~~v~G~~~~ 165 (315)
T 2ydy_A 127 P--APLNLYGKTKLDGEKAVLENNLGAAVLRIPILYGEVEK 165 (315)
T ss_dssp C--CCCSHHHHHHHHHHHHHHHHCTTCEEEEECSEECSCSS
T ss_pred C--CCcCHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCc
Confidence 4 23444544343333 224578899999999998764
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.90 E-value=5.5e-23 Score=171.85 Aligned_cols=175 Identities=14% Similarity=0.036 Sum_probs=123.1
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHhcccc
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSLISQE 82 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~ 82 (211)
++|||||||||||++|+++|+ +.|++|++++|...... ....+++ ++.+|++|++++.+++++..
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~-----~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~-~~~~Dl~d~~~~~~~~~~~~-- 73 (347)
T 1orr_A 2 AKLLITGGCGFLGSNLASFAL-----SQGIDLIVFDNLSRKGATDNLHWLSSLGNFE-FVHGDIRNKNDVTRLITKYM-- 73 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEECCCSTTHHHHHHHHHTTCCCE-EEECCTTCHHHHHHHHHHHC--
T ss_pred cEEEEeCCCchhHHHHHHHHH-----hCCCEEEEEeCCCccCchhhhhhhccCCceE-EEEcCCCCHHHHHHHHhccC--
Confidence 579999999999999999999 68999999998532110 0124588 99999999999999988753
Q ss_pred cceEEeecccCCc-----hhHHHHhhcHHHHHHHHHHHHhcCCCCCCce-EEEEeecCeeeecccCCccccCC-C---CC
Q 028258 83 ITNLFWVPLQVQE-----SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLR-HVALLTGTKHYMGPIFDPSLAGQ-L---MP 152 (211)
Q Consensus 83 ~~~v~~~a~~~~~-----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~-~~~~~s~~~~y~~~~~~~~~~g~-~---~~ 152 (211)
+|+|||+|+.... ++...+++|+.++.++++++.+. .++ +|+++||..+|+.....+..... . ..
T Consensus 74 ~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~-----~~~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~ 148 (347)
T 1orr_A 74 PDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQY-----NSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVD 148 (347)
T ss_dssp CSEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-----CTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETT
T ss_pred CCEEEECCcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHh-----CCCceEEEeccHHHhCCCCcCCcccccccccccc
Confidence 7999999987542 45567899999999999999987 344 89999999999742110000000 0 00
Q ss_pred CCCCCcCCCCCCCCCCcchhH-----HHHHhh--cCCCceEEEecCCceEecCC
Q 028258 153 YEVPFKEDSSRLPFPNFYYEL-----EDVSAS--YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 153 ~~~~~~e~~~~~~~~~~~~~~-----e~~l~~--~~~~~~~~i~Rp~~i~G~~~ 199 (211)
...+++|+.+. .+...|.. |.++.. ...+++++++||+.+||+..
T Consensus 149 ~~~~~~e~~~~--~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~ 200 (347)
T 1orr_A 149 KPNGYDESTQL--DFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQ 200 (347)
T ss_dssp CTTCBCTTSCC--CCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTC
T ss_pred cccCccccCCC--CCCCchHHHHHHHHHHHHHHHHHhCCcEEEEccCceeCcCC
Confidence 01235566553 23334443 333333 23489999999999999875
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=2.5e-22 Score=167.68 Aligned_cols=163 Identities=13% Similarity=0.075 Sum_probs=122.6
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCC--------CCCCceeEEEeeCCCHHHHHHHHHhcccc
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF--------PTALVDRYITFDALDPTDTALKLSLISQE 82 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~--------~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~ 82 (211)
+|||||||||||++++++|+ ++|++|++++|....... ...+++ ++.+|++|++.+.+++++..
T Consensus 2 ~vlVTGatG~iG~~l~~~L~-----~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~-- 73 (338)
T 1udb_A 2 RVLVTGGSGYIGSHTCVQLL-----QNGHDVIILDNLCNSKRSVLPVIERLGGKHPT-FVEGDIRNEALMTEILHDHA-- 73 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHH-----HTTCEEEEEECCSSCCTTHHHHHHHHHTSCCE-EEECCTTCHHHHHHHHHHTT--
T ss_pred EEEEECCCCHHHHHHHHHHH-----HCCCEEEEEecCCCcchhHHHHHHhhcCCcce-EEEccCCCHHHHHHHhhccC--
Confidence 69999999999999999999 689999999875432110 024578 89999999999999888643
Q ss_pred cceEEeecccCCc-----hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCC
Q 028258 83 ITNLFWVPLQVQE-----SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPF 157 (211)
Q Consensus 83 ~~~v~~~a~~~~~-----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~ 157 (211)
+|+|||+|+.... ++...+++|+.++.++++++++. ++++|+++||..+|+.+ ...++
T Consensus 74 ~D~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~iv~~SS~~~~g~~------------~~~~~ 136 (338)
T 1udb_A 74 IDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAA-----NVKNFIFSSSATVYGDN------------PKIPY 136 (338)
T ss_dssp CSEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-----TCCEEEEEEEGGGGCSC------------CSSSB
T ss_pred CCEEEECCccCccccchhcHHHHHHHHHHHHHHHHHHHHhc-----CCCeEEEEccHHHhCCC------------CCCCc
Confidence 7999999986432 34457899999999999999876 56899999999888743 13467
Q ss_pred cCCCCCCCCCCcchhH-----HHHHhh---cCCCceEEEecCCceEecCC
Q 028258 158 KEDSSRLPFPNFYYEL-----EDVSAS---YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 158 ~e~~~~~~~~~~~~~~-----e~~l~~---~~~~~~~~i~Rp~~i~G~~~ 199 (211)
+|+.+..+ +...|.. |.++.. ..++++++++||+++||+.+
T Consensus 137 ~e~~~~~~-~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~ 185 (338)
T 1udb_A 137 VESFPTGT-PQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHP 185 (338)
T ss_dssp CTTSCCCC-CSSHHHHHHHHHHHHHHHHHHHSTTCEEEEEEECEEECCCT
T ss_pred CcccCCCC-CCChHHHHHHHHHHHHHHHHHhcCCCceEEEeeceecCCCc
Confidence 77776422 2333433 333333 23489999999999999854
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=1.7e-22 Score=172.15 Aligned_cols=171 Identities=12% Similarity=0.044 Sum_probs=125.4
Q ss_pred CeEEEEcCCChHHHHHHHHhh-CCCCCCCCcEEEEEeCCCCCC--------C--C--------C---CCC---ceeEEEe
Q 028258 10 SVALIIGVTGISGLSLAEALK-NPTTPGSPWKVYGAARRPPPG--------W--F--------P---TAL---VDRYITF 64 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~-~~~~~~~g~~V~~~~R~~~~~--------~--~--------~---~~~---~~~~i~~ 64 (211)
++|||||||||||++|+++|+ + .|++|++++|+.... . . . ..+ ++ ++.+
T Consensus 3 m~vlVTGatG~iG~~l~~~L~~~-----~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 76 (397)
T 1gy8_A 3 MRVLVCGGAGYIGSHFVRALLRD-----TNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAA-LEVG 76 (397)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH-----CCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCE-EEES
T ss_pred CEEEEECCCCHHHHHHHHHHHHh-----CCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEE-EEEC
Confidence 379999999999999999998 5 789999999875431 0 0 0 124 88 9999
Q ss_pred eCCCHHHHHHHHHhcccccceEEeecccCCc-----hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeec
Q 028258 65 DALDPTDTALKLSLISQEITNLFWVPLQVQE-----SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMG 139 (211)
Q Consensus 65 Dl~d~~~~~~~~~~~~~~~~~v~~~a~~~~~-----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~ 139 (211)
|++|++.+.++++.... +|+|||+|+.... ++...+++|+.++.++++++.+. ++++|+++||..+|+.
T Consensus 77 Dl~d~~~~~~~~~~~~~-~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~-----~~~~iv~~SS~~v~g~ 150 (397)
T 1gy8_A 77 DVRNEDFLNGVFTRHGP-IDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLH-----KCDKIIFSSSAAIFGN 150 (397)
T ss_dssp CTTCHHHHHHHHHHSCC-CCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-----TCCEEEEEEEGGGTBS
T ss_pred CCCCHHHHHHHHHhcCC-CCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHh-----CCCEEEEECCHHHhCC
Confidence 99999999998885432 7999999987542 45567899999999999999876 5789999999988874
Q ss_pred ccCCccccCCCCCCCCCCcCCCCCCCCCCcchhH-----HHHHhh--cCCCceEEEecCCceEecCC
Q 028258 140 PIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYEL-----EDVSAS--YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 140 ~~~~~~~~g~~~~~~~~~~e~~~~~~~~~~~~~~-----e~~l~~--~~~~~~~~i~Rp~~i~G~~~ 199 (211)
+.. +.......+++|+++. .|...|.. |.++.. ...+++++++||+.+||+..
T Consensus 151 ~~~-----~~~~~~~~~~~E~~~~--~p~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~G~~~ 210 (397)
T 1gy8_A 151 PTM-----GSVSTNAEPIDINAKK--SPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHE 210 (397)
T ss_dssp CCC----------CCCCBCTTSCC--BCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCT
T ss_pred CCc-----ccccccccCcCccCCC--CCCCchHHHHHHHHHHHHHHHHHHCCcEEEEeccceeCCCc
Confidence 310 0000013567888764 33344443 333333 22489999999999999974
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=3.6e-23 Score=175.78 Aligned_cols=164 Identities=14% Similarity=0.038 Sum_probs=117.3
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCC-cEEEEEeCCCCCCC--C-CCCCceeEEEeeCCCHHHHHHHHHhcccccc
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSP-WKVYGAARRPPPGW--F-PTALVDRYITFDALDPTDTALKLSLISQEIT 84 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g-~~V~~~~R~~~~~~--~-~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~ 84 (211)
+++|||||||||||++|+++|+ ++| ++|++++|++.... . ...+++ ++.+|++|++.+.+++++ +|
T Consensus 32 ~~~ilVtGatG~iG~~l~~~L~-----~~g~~~V~~~~r~~~~~~~~l~~~~~v~-~~~~Dl~d~~~l~~~~~~----~d 101 (377)
T 2q1s_A 32 NTNVMVVGGAGFVGSNLVKRLL-----ELGVNQVHVVDNLLSAEKINVPDHPAVR-FSETSITDDALLASLQDE----YD 101 (377)
T ss_dssp TCEEEEETTTSHHHHHHHHHHH-----HTTCSEEEEECCCTTCCGGGSCCCTTEE-EECSCTTCHHHHHHCCSC----CS
T ss_pred CCEEEEECCccHHHHHHHHHHH-----HcCCceEEEEECCCCCchhhccCCCceE-EEECCCCCHHHHHHHhhC----CC
Confidence 4689999999999999999999 688 99999999765421 1 146788 999999999988877763 79
Q ss_pred eEEeecccCCc-----hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCc-
Q 028258 85 NLFWVPLQVQE-----SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFK- 158 (211)
Q Consensus 85 ~v~~~a~~~~~-----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~- 158 (211)
+|||+|+.... ++...+++|+.++.++++++.+. +++++|+++||..+|+... ..|++
T Consensus 102 ~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~----~~~~~~V~~SS~~vyg~~~------------~~~~~~ 165 (377)
T 2q1s_A 102 YVFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHF----KRLKKVVYSAAGCSIAEKT------------FDDAKA 165 (377)
T ss_dssp EEEECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTC----SSCCEEEEEEEC-------------------------
T ss_pred EEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHh----CCCCeEEEeCCHHHcCCCC------------CCCcCc
Confidence 99999987542 45567899999999999999763 2578999999999997431 23556
Q ss_pred -CCC---CCCCCCCcchhH-----HHHHhh--cCCCceEEEecCCceEecCC
Q 028258 159 -EDS---SRLPFPNFYYEL-----EDVSAS--YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 159 -e~~---~~~~~~~~~~~~-----e~~l~~--~~~~~~~~i~Rp~~i~G~~~ 199 (211)
|+. |.. .|...|.. |.++.+ ...+++++++||+.+||+..
T Consensus 166 ~E~~~~~~~~-~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~G~~~ 216 (377)
T 2q1s_A 166 TEETDIVSLH-NNDSPYSMSKIFGEFYSVYYHKQHQLPTVRARFQNVYGPGE 216 (377)
T ss_dssp -CCCCCCCSS-CCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTC
T ss_pred cccccccccc-CCCCchHHHHHHHHHHHHHHHHHhCCCEEEEeeccEECCCC
Confidence 665 420 23333433 444433 23589999999999999875
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A | Back alignment and structure |
|---|
Probab=99.89 E-value=8e-23 Score=170.76 Aligned_cols=163 Identities=17% Similarity=0.173 Sum_probs=121.3
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCC-CcEEEEEeCCCCCCC--CCCCCceeEEEeeCCCH-HHHHHHHHhcccccce
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGS-PWKVYGAARRPPPGW--FPTALVDRYITFDALDP-TDTALKLSLISQEITN 85 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~-g~~V~~~~R~~~~~~--~~~~~~~~~i~~Dl~d~-~~~~~~~~~~~~~~~~ 85 (211)
++|||||||||||++++++|+ +. |++|++++|++.... ....+++ ++.+|++|. +.+.+++++ +|+
T Consensus 1 m~vlVtGatG~iG~~l~~~L~-----~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~----~d~ 70 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLL-----REDHYEVYGLDIGSDAISRFLNHPHFH-FVEGDISIHSEWIEYHVKK----CDV 70 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHH-----HSTTCEEEEEESCCGGGGGGTTCTTEE-EEECCTTTCSHHHHHHHHH----CSE
T ss_pred CeEEEECCCcHHHHHHHHHHH-----HhCCCEEEEEeCCcchHHHhhcCCCeE-EEeccccCcHHHHHhhccC----CCE
Confidence 379999999999999999999 45 899999999865421 1246788 999999985 567777775 689
Q ss_pred EEeecccCCc-----hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCC
Q 028258 86 LFWVPLQVQE-----SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKED 160 (211)
Q Consensus 86 v~~~a~~~~~-----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~ 160 (211)
|||+|+.... ++...+++|+.++.++++++.+. + ++|+++||..+|+... ..+++|+
T Consensus 71 vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-----~-~~~v~~SS~~v~g~~~------------~~~~~e~ 132 (345)
T 2bll_A 71 VLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKY-----R-KRIIFPSTSEVYGMCS------------DKYFDED 132 (345)
T ss_dssp EEECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHT-----T-CEEEEECCGGGGBTCC------------CSSBCTT
T ss_pred EEEcccccCccchhcCHHHHHHHHHHHHHHHHHHHHHh-----C-CeEEEEecHHHcCCCC------------CCCcCCc
Confidence 9999987542 34567789999999999999886 4 7899999999987431 2355666
Q ss_pred CCCC---C--CCCcchhH-----HHHHhh--cCCCceEEEecCCceEecCCC
Q 028258 161 SSRL---P--FPNFYYEL-----EDVSAS--YSPAITYSVHRSSVIIGASPR 200 (211)
Q Consensus 161 ~~~~---~--~~~~~~~~-----e~~l~~--~~~~~~~~i~Rp~~i~G~~~~ 200 (211)
++.. + .|...|.. |.++.. +..+++++++||+.+||+...
T Consensus 133 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~ 184 (345)
T 2bll_A 133 HSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLD 184 (345)
T ss_dssp TCCCBCCCTTCGGGHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEECSSCC
T ss_pred ccccccCcccCcccccHHHHHHHHHHHHHHHHhcCCCEEEEcCCcccCCCcc
Confidence 5421 1 12233443 333332 235899999999999999753
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.8e-22 Score=168.72 Aligned_cols=164 Identities=12% Similarity=0.080 Sum_probs=120.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC--CC-CCCceeEEEeeCCCHHHHHHHHHhcccccc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW--FP-TALVDRYITFDALDPTDTALKLSLISQEIT 84 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~--~~-~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~ 84 (211)
++++|||||||||||++|+++|+ ++|++|++++|++.... .. ..+++ ++.+|++|++.+.+++++.. +|
T Consensus 20 ~~~~vlVTGatG~iG~~l~~~L~-----~~g~~V~~~~r~~~~~~~~l~~~~~~~-~~~~Dl~d~~~~~~~~~~~~--~D 91 (333)
T 2q1w_A 20 HMKKVFITGICGQIGSHIAELLL-----ERGDKVVGIDNFATGRREHLKDHPNLT-FVEGSIADHALVNQLIGDLQ--PD 91 (333)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEECCSSCCGGGSCCCTTEE-EEECCTTCHHHHHHHHHHHC--CS
T ss_pred CCCEEEEeCCccHHHHHHHHHHH-----HCCCEEEEEECCCccchhhHhhcCCce-EEEEeCCCHHHHHHHHhccC--Cc
Confidence 35789999999999999999999 68999999999764321 11 15788 99999999999999988743 79
Q ss_pred eEEeecccCCc---hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCC
Q 028258 85 NLFWVPLQVQE---SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDS 161 (211)
Q Consensus 85 ~v~~~a~~~~~---~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~ 161 (211)
+|||+|+.... .... +++|+.++.++++++.+. ++++|+++||..+|+.+.. .. .. +++|++
T Consensus 92 ~vih~A~~~~~~~~~~~~-~~~N~~~~~~l~~a~~~~-----~~~~iV~~SS~~~~g~~~~------~~--~~-~~~E~~ 156 (333)
T 2q1w_A 92 AVVHTAASYKDPDDWYND-TLTNCVGGSNVVQAAKKN-----NVGRFVYFQTALCYGVKPI------QQ--PV-RLDHPR 156 (333)
T ss_dssp EEEECCCCCSCTTCHHHH-HHHHTHHHHHHHHHHHHT-----TCSEEEEEEEGGGGCSCCC------SS--SB-CTTSCC
T ss_pred EEEECceecCCCccCChH-HHHHHHHHHHHHHHHHHh-----CCCEEEEECcHHHhCCCcc------cC--CC-CcCCCC
Confidence 99999987543 1112 889999999999999886 5789999999888862100 00 12 667765
Q ss_pred CCCCCCC-cchhHHHHHhh---cC-CCceEEEecCCceEecCC
Q 028258 162 SRLPFPN-FYYELEDVSAS---YS-PAITYSVHRSSVIIGASP 199 (211)
Q Consensus 162 ~~~~~~~-~~~~~e~~l~~---~~-~~~~~~i~Rp~~i~G~~~ 199 (211)
.|. ..|...|...+ +. .. +++++||+.+||++.
T Consensus 157 ----~p~~~~Y~~sK~~~E~~~~~s~~-~~~ilR~~~v~gp~~ 194 (333)
T 2q1w_A 157 ----NPANSSYAISKSANEDYLEYSGL-DFVTFRLANVVGPRN 194 (333)
T ss_dssp ----CCTTCHHHHHHHHHHHHHHHHTC-CEEEEEESEEESTTC
T ss_pred ----CCCCCchHHHHHHHHHHHHhhhC-CeEEEeeceEECcCC
Confidence 122 34444443333 12 22 899999999999873
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=8.9e-23 Score=168.85 Aligned_cols=158 Identities=15% Similarity=0.118 Sum_probs=121.5
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCC--CcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccceEEe
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGS--PWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITNLFW 88 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~--g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~~ 88 (211)
+|||||||||||++++++|+ ++ |++|++++|++... .+++ ++.+|++|++++.++++... +|+|||
T Consensus 1 ~vlVtGatG~iG~~l~~~L~-----~~~~g~~V~~~~r~~~~~----~~~~-~~~~D~~d~~~~~~~~~~~~--~d~vih 68 (317)
T 3ajr_A 1 MILVTGSSGQIGTELVPYLA-----EKYGKKNVIASDIVQRDT----GGIK-FITLDVSNRDEIDRAVEKYS--IDAIFH 68 (317)
T ss_dssp CEEEESTTSTTHHHHHHHHH-----HHHCGGGEEEEESSCCCC----TTCC-EEECCTTCHHHHHHHHHHTT--CCEEEE
T ss_pred CEEEEcCCcHHHHHHHHHHH-----HhcCCCEEEEecCCCccc----cCce-EEEecCCCHHHHHHHHhhcC--CcEEEE
Confidence 48999999999999999999 56 79999999976542 2678 99999999999999888543 799999
Q ss_pred ecccCC----chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCCCCC
Q 028258 89 VPLQVQ----ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRL 164 (211)
Q Consensus 89 ~a~~~~----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~~~~ 164 (211)
+|+... .++...+++|+.++.++++++.+. ++++|+++||..+|+... ...+.+|+.+.
T Consensus 69 ~a~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-----~~~~~v~~SS~~~~~~~~-----------~~~~~~e~~~~- 131 (317)
T 3ajr_A 69 LAGILSAKGEKDPALAYKVNMNGTYNILEAAKQH-----RVEKVVIPSTIGVFGPET-----------PKNKVPSITIT- 131 (317)
T ss_dssp CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-----TCCEEEEEEEGGGCCTTS-----------CSSSBCSSSCC-
T ss_pred CCcccCCccccChHHHhhhhhHHHHHHHHHHHHc-----CCCEEEEecCHHHhCCCC-----------CCCCccccccC-
Confidence 998643 235567899999999999999886 578999999999987421 12345666653
Q ss_pred CCCCcchhH-----HHHHhh--cCCCceEEEecCCceEecC
Q 028258 165 PFPNFYYEL-----EDVSAS--YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 165 ~~~~~~~~~-----e~~l~~--~~~~~~~~i~Rp~~i~G~~ 198 (211)
.|...|.. |.++.. +..+++++++||+.+||+.
T Consensus 132 -~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~~~g~~ 171 (317)
T 3ajr_A 132 -RPRTMFGVTKIAAELLGQYYYEKFGLDVRSLRYPGIISYK 171 (317)
T ss_dssp -CCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSS
T ss_pred -CCCchHHHHHHHHHHHHHHHHHhcCCeEEEEecCcEeccC
Confidence 23344443 333322 2458999999999999975
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} | Back alignment and structure |
|---|
Probab=99.89 E-value=3e-23 Score=171.52 Aligned_cols=154 Identities=20% Similarity=0.149 Sum_probs=114.5
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC----CC-C----CCCCceeEEEeeCCCHHHHHHHHH
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP----GW-F----PTALVDRYITFDALDPTDTALKLS 77 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~----~~-~----~~~~~~~~i~~Dl~d~~~~~~~~~ 77 (211)
.|+++|||||||||||++|+++|+ +.|++|++++|++.. .. . ...+++ ++.+|++
T Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~-----~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~---------- 68 (321)
T 3vps_A 5 TLKHRILITGGAGFIGGHLARALV-----ASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLE-LEERDLS---------- 68 (321)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHH-----HTTCCEEEECCCSSCCSSCCTTSSEEECSCGGG-CCHHHHT----------
T ss_pred cCCCeEEEECCCChHHHHHHHHHH-----HCCCEEEEEecCCcccccchhhhhhhccCCCee-EEeCccc----------
Confidence 346899999999999999999999 689999999997652 11 0 124556 6666665
Q ss_pred hcccccceEEeecccCC-----chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCC
Q 028258 78 LISQEITNLFWVPLQVQ-----ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMP 152 (211)
Q Consensus 78 ~~~~~~~~v~~~a~~~~-----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~ 152 (211)
+ +|+|||+|+... .++...++ |+.++.++++++.+. ++++|+++||..+|+.+
T Consensus 69 ~----~d~vi~~a~~~~~~~~~~~~~~~~~-n~~~~~~ll~a~~~~-----~v~~~v~~SS~~v~~~~------------ 126 (321)
T 3vps_A 69 D----VRLVYHLASHKSVPRSFKQPLDYLD-NVDSGRHLLALCTSV-----GVPKVVVGSTCEVYGQA------------ 126 (321)
T ss_dssp T----EEEEEECCCCCCHHHHTTSTTTTHH-HHHHHHHHHHHHHHH-----TCCEEEEEEEGGGGCSC------------
T ss_pred c----CCEEEECCccCChHHHHhCHHHHHH-HHHHHHHHHHHHHHc-----CCCeEEEecCHHHhCCC------------
Confidence 1 799999998754 23444567 999999999999987 57899999999999753
Q ss_pred CCCCCcCCCCCCCCCCcchh-----HHHHHhh--cCCCc-eEEEecCCceEecCCC
Q 028258 153 YEVPFKEDSSRLPFPNFYYE-----LEDVSAS--YSPAI-TYSVHRSSVIIGASPR 200 (211)
Q Consensus 153 ~~~~~~e~~~~~~~~~~~~~-----~e~~l~~--~~~~~-~~~i~Rp~~i~G~~~~ 200 (211)
...|++|+++.. |...|. .|+++.. ...++ +++++||+.+||+...
T Consensus 127 ~~~~~~E~~~~~--p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~ 180 (321)
T 3vps_A 127 DTLPTPEDSPLS--PRSPYAASKVGLEMVAGAHQRASVAPEVGIVRFFNVYGPGER 180 (321)
T ss_dssp SSSSBCTTSCCC--CCSHHHHHHHHHHHHHHHHHHSSSSCEEEEEEECEEECTTCC
T ss_pred CCCCCCCCCCCC--CCChhHHHHHHHHHHHHHHHHHcCCCceEEEEeccccCcCCC
Confidence 145788888743 334443 3444443 35688 9999999999998764
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=3.8e-23 Score=172.71 Aligned_cols=166 Identities=13% Similarity=0.144 Sum_probs=119.2
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC-------CCC--CCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-------WFP--TALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~-------~~~--~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
+|+|||||||||||++|+++|+ ++||+|+++.|++... ... ..+++ ++.+|++|++++.+++++
T Consensus 5 ~~~vlVTGatGfIG~~l~~~L~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~~~~~~~~- 77 (337)
T 2c29_D 5 SETVCVTGASGFIGSWLVMRLL-----ERGYTVRATVRDPTNVKKVKHLLDLPKAETHLT-LWKADLADEGSFDEAIKG- 77 (337)
T ss_dssp -CEEEETTTTSHHHHHHHHHHH-----HTTCEEEEEESCTTCHHHHHHHHTSTTHHHHEE-EEECCTTSTTTTHHHHTT-
T ss_pred CCEEEEECCchHHHHHHHHHHH-----HCCCEEEEEECCcchhHHHHHHHhcccCCCeEE-EEEcCCCCHHHHHHHHcC-
Confidence 5789999999999999999999 6899999999976521 011 13578 899999999988888875
Q ss_pred ccccceEEeecccCCc---h-hHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe-eeecccCCccccCCCCCCC
Q 028258 80 SQEITNLFWVPLQVQE---S-EEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK-HYMGPIFDPSLAGQLMPYE 154 (211)
Q Consensus 80 ~~~~~~v~~~a~~~~~---~-~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~-~y~~~~~~~~~~g~~~~~~ 154 (211)
+|+|||+|+.... + ....+++|+.++.++++++.+. . .+++|+++||.. +|+.+. ..
T Consensus 78 ---~d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~---~-~~~riV~~SS~~~~~~~~~-----------~~ 139 (337)
T 2c29_D 78 ---CTGVFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAA---K-TVRRLVFTSSAGTVNIQEH-----------QL 139 (337)
T ss_dssp ---CSEEEECCCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHH---S-CCCEEEEECCGGGTSCSSS-----------CC
T ss_pred ---CCEEEEeccccCCCCCChHHHHHHHHHHHHHHHHHHHHhC---C-CccEEEEeeeHhhcccCCC-----------CC
Confidence 6899999976421 2 2346789999999999999886 2 378999999876 443211 12
Q ss_pred CCCcCCCCCC-------CCCCcchhHHHHHhh-------cCCCceEEEecCCceEecCC
Q 028258 155 VPFKEDSSRL-------PFPNFYYELEDVSAS-------YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 155 ~~~~e~~~~~-------~~~~~~~~~e~~l~~-------~~~~~~~~i~Rp~~i~G~~~ 199 (211)
.+++|+.+.. ..+.+.|...|...+ +..+++++++||+.+||+..
T Consensus 140 ~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~ 198 (337)
T 2c29_D 140 PVYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFI 198 (337)
T ss_dssp SEECTTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHHHTCCEEEEEECEEESCCS
T ss_pred cccCcccCCchhhhcccCCccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCC
Confidence 3456654321 012333544443332 23589999999999999975
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.89 E-value=3.1e-23 Score=163.47 Aligned_cols=152 Identities=14% Similarity=0.117 Sum_probs=117.1
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCC-HHHHHHHHHhcccccceEEee
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALD-PTDTALKLSLISQEITNLFWV 89 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d-~~~~~~~~~~~~~~~~~v~~~ 89 (211)
+||||||||+||++++++|+ ++|++|++++|++.+... ..+++ ++.+|++| ++++.+++++ +|.|||+
T Consensus 2 ~ilItGatG~iG~~l~~~L~-----~~g~~V~~~~R~~~~~~~-~~~~~-~~~~D~~d~~~~~~~~~~~----~d~vi~~ 70 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLS-----TTDYQIYAGARKVEQVPQ-YNNVK-AVHFDVDWTPEEMAKQLHG----MDAIINV 70 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHT-----TSSCEEEEEESSGGGSCC-CTTEE-EEECCTTSCHHHHHTTTTT----CSEEEEC
T ss_pred eEEEECCCCHHHHHHHHHHH-----HCCCEEEEEECCccchhh-cCCce-EEEecccCCHHHHHHHHcC----CCEEEEC
Confidence 69999999999999999999 689999999998765431 27889 99999999 9888888875 7899999
Q ss_pred cccCCchhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCCCCCCCCCc
Q 028258 90 PLQVQESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNF 169 (211)
Q Consensus 90 a~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~~~~~~~~~ 169 (211)
++.... +.+++|+.++.++++++++. ++++|+++||...|.. .+..| .+ +.|..
T Consensus 71 ag~~~~---~~~~~n~~~~~~l~~a~~~~-----~~~~iv~~SS~~~~~~---------------~~~~e-~~--~~~~~ 124 (219)
T 3dqp_A 71 SGSGGK---SLLKVDLYGAVKLMQAAEKA-----EVKRFILLSTIFSLQP---------------EKWIG-AG--FDALK 124 (219)
T ss_dssp CCCTTS---SCCCCCCHHHHHHHHHHHHT-----TCCEEEEECCTTTTCG---------------GGCCS-HH--HHHTH
T ss_pred CcCCCC---CcEeEeHHHHHHHHHHHHHh-----CCCEEEEECcccccCC---------------Ccccc-cc--ccccc
Confidence 987653 36788999999999999886 6789999998655431 12333 21 12223
Q ss_pred chh-----HHHHHhhcCCCceEEEecCCceEecCCC
Q 028258 170 YYE-----LEDVSASYSPAITYSVHRSSVIIGASPR 200 (211)
Q Consensus 170 ~~~-----~e~~l~~~~~~~~~~i~Rp~~i~G~~~~ 200 (211)
.|. .|+++. +..+++|+++||+.+||+...
T Consensus 125 ~Y~~sK~~~e~~~~-~~~~i~~~ilrp~~v~g~~~~ 159 (219)
T 3dqp_A 125 DYYIAKHFADLYLT-KETNLDYTIIQPGALTEEEAT 159 (219)
T ss_dssp HHHHHHHHHHHHHH-HSCCCEEEEEEECSEECSCCC
T ss_pred HHHHHHHHHHHHHH-hccCCcEEEEeCceEecCCCC
Confidence 333 344443 368999999999999998653
|
| >1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1.1e-22 Score=168.53 Aligned_cols=155 Identities=15% Similarity=0.158 Sum_probs=117.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccceEE
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITNLF 87 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~ 87 (211)
++++|||||||||||++|+++|+ ++|++|+++.|+. .+|++|++++.++++... +|+||
T Consensus 2 ~~~~ilVtGatG~iG~~l~~~L~-----~~g~~v~~~~r~~--------------~~D~~d~~~~~~~~~~~~--~d~vi 60 (321)
T 1e6u_A 2 AKQRVFIAGHRGMVGSAIRRQLE-----QRGDVELVLRTRD--------------ELNLLDSRAVHDFFASER--IDQVY 60 (321)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHT-----TCTTEEEECCCTT--------------TCCTTCHHHHHHHHHHHC--CSEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHH-----hCCCeEEEEecCc--------------cCCccCHHHHHHHHHhcC--CCEEE
Confidence 34689999999999999999999 6899999887752 268999999999888543 79999
Q ss_pred eecccCCc------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCC
Q 028258 88 WVPLQVQE------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDS 161 (211)
Q Consensus 88 ~~a~~~~~------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~ 161 (211)
|+|+.... ++...+++|+.++.++++++.+. ++++|+++||..+|+.. ...|++|++
T Consensus 61 h~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~~v~~SS~~vyg~~------------~~~~~~E~~ 123 (321)
T 1e6u_A 61 LAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQN-----DVNKLLFLGSSCIYPKL------------AKQPMAESE 123 (321)
T ss_dssp ECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-----TCCEEEEECCGGGSCTT------------CCSSBCGGG
T ss_pred EcCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHh-----CCCeEEEEccHHHcCCC------------CCCCcCccc
Confidence 99987541 44567889999999999999886 57899999999999742 134667776
Q ss_pred CCC--CCC-CcchhH-----HHHHhh--cCCCceEEEecCCceEecCCC
Q 028258 162 SRL--PFP-NFYYEL-----EDVSAS--YSPAITYSVHRSSVIIGASPR 200 (211)
Q Consensus 162 ~~~--~~~-~~~~~~-----e~~l~~--~~~~~~~~i~Rp~~i~G~~~~ 200 (211)
+.. ..| ...|.. |.++.+ ...+++++++||+.+||+...
T Consensus 124 ~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~ 172 (321)
T 1e6u_A 124 LLQGTLEPTNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDN 172 (321)
T ss_dssp TTSSCCCGGGHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEESTTCC
T ss_pred cccCCCCCCCCccHHHHHHHHHHHHHHHHHhCCCEEEEEeCCcCCcCCC
Confidence 321 123 224443 333333 235899999999999998763
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.9e-22 Score=168.67 Aligned_cols=166 Identities=14% Similarity=0.060 Sum_probs=125.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCC-------cEEEEEeCCCCCCC-CCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSP-------WKVYGAARRPPPGW-FPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g-------~~V~~~~R~~~~~~-~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
++++|||||||||||++|+++|+ ++| ++|++++|++.... ....+++ ++.+|++|++.+.+++++
T Consensus 13 ~~~~vlVtGa~G~iG~~l~~~L~-----~~g~~~~r~~~~V~~~~r~~~~~~~~~~~~~~-~~~~Dl~d~~~~~~~~~~- 85 (342)
T 2hrz_A 13 QGMHIAIIGAAGMVGRKLTQRLV-----KDGSLGGKPVEKFTLIDVFQPEAPAGFSGAVD-ARAADLSAPGEAEKLVEA- 85 (342)
T ss_dssp SCEEEEEETTTSHHHHHHHHHHH-----HHCEETTEEEEEEEEEESSCCCCCTTCCSEEE-EEECCTTSTTHHHHHHHT-
T ss_pred cCCEEEEECCCcHHHHHHHHHHH-----hcCCcccCCCceEEEEEccCCccccccCCcee-EEEcCCCCHHHHHHHHhc-
Confidence 45689999999999999999999 688 89999999865322 1245688 899999999998888852
Q ss_pred ccccceEEeecccCC----chhHHHHhhcHHHHHHHHHHHHhcCCCCC---CceEEEEeecCeeeecccCCccccCCCCC
Q 028258 80 SQEITNLFWVPLQVQ----ESEEVNIFKNSTMLKNVLSVLVSSNSGRS---RLRHVALLTGTKHYMGPIFDPSLAGQLMP 152 (211)
Q Consensus 80 ~~~~~~v~~~a~~~~----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---~~~~~~~~s~~~~y~~~~~~~~~~g~~~~ 152 (211)
. +|+|||+|+... .++...+++|+.++.++++++.+. .. .+++|+++||..+|+...
T Consensus 86 -~-~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~---~~~~~~~~~iv~~SS~~~~~~~~----------- 149 (342)
T 2hrz_A 86 -R-PDVIFHLAAIVSGEAELDFDKGYRINLDGTRYLFDAIRIA---NGKDGYKPRVVFTSSIAVFGAPL----------- 149 (342)
T ss_dssp -C-CSEEEECCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHH---HHHHCCCCEEEEEEEGGGCCSSC-----------
T ss_pred -C-CCEEEECCccCcccccccHHHHHHHHHHHHHHHHHHHHhc---ccccCCCcEEEEeCchHhhCCCC-----------
Confidence 2 799999998754 245567899999999999999876 10 168999999998887421
Q ss_pred CCCCCcCCCCCCCCCCcchhH-----HHHHhh--cCCCceEEEecCCceEe-cCC
Q 028258 153 YEVPFKEDSSRLPFPNFYYEL-----EDVSAS--YSPAITYSVHRSSVIIG-ASP 199 (211)
Q Consensus 153 ~~~~~~e~~~~~~~~~~~~~~-----e~~l~~--~~~~~~~~i~Rp~~i~G-~~~ 199 (211)
..|++|+++.. |...|.. |.++.+ ...+++++++|++.+|| |+.
T Consensus 150 -~~~~~E~~~~~--~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~ 201 (342)
T 2hrz_A 150 -PYPIPDEFHTT--PLTSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGK 201 (342)
T ss_dssp -CSSBCTTCCCC--CSSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSS
T ss_pred -CCCcCCCCCCC--CcchHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCC
Confidence 24678887642 3344443 344333 34578999999999998 553
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1.9e-22 Score=172.09 Aligned_cols=163 Identities=17% Similarity=0.087 Sum_probs=119.6
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC----------C--------------CCCCCceeEEEe
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG----------W--------------FPTALVDRYITF 64 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~----------~--------------~~~~~~~~~i~~ 64 (211)
+++|||||||||||++|+++|+ ++|++|++++|..... . ....+++ ++.+
T Consensus 11 ~~~vlVTG~tGfIG~~l~~~L~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~-~~~~ 84 (404)
T 1i24_A 11 GSRVMVIGGDGYCGWATALHLS-----KKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIE-LYVG 84 (404)
T ss_dssp -CEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCE-EEES
T ss_pred CCeEEEeCCCcHHHHHHHHHHH-----hCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceE-EEEC
Confidence 3689999999999999999999 6899999998853210 0 0124688 9999
Q ss_pred eCCCHHHHHHHHHhcccccceEEeecccCCc-----hh---HHHHhhcHHHHHHHHHHHHhcCCCCCCc-eEEEEeecCe
Q 028258 65 DALDPTDTALKLSLISQEITNLFWVPLQVQE-----SE---EVNIFKNSTMLKNVLSVLVSSNSGRSRL-RHVALLTGTK 135 (211)
Q Consensus 65 Dl~d~~~~~~~~~~~~~~~~~v~~~a~~~~~-----~~---~~~~~~n~~~~~~l~~~~~~~~~~~~~~-~~~~~~s~~~ 135 (211)
|++|++++.+++++.. +|+|||+|+.... ++ ...+++|+.++.++++++.+. ++ ++|+++||..
T Consensus 85 Dl~d~~~~~~~~~~~~--~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~-----~~~~~~V~~SS~~ 157 (404)
T 1i24_A 85 DICDFEFLAESFKSFE--PDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEF-----GEECHLVKLGTMG 157 (404)
T ss_dssp CTTSHHHHHHHHHHHC--CSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHH-----CTTCEEEEECCGG
T ss_pred CCCCHHHHHHHHhccC--CCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHh-----CCCcEEEEeCcHH
Confidence 9999999999988864 7999999987532 12 236789999999999999886 34 5899999998
Q ss_pred eeecccCCccccCCCCCCCCCCcCC--------------CCCCCCCCcchhHHH-----HHhh--cCCCceEEEecCCce
Q 028258 136 HYMGPIFDPSLAGQLMPYEVPFKED--------------SSRLPFPNFYYELED-----VSAS--YSPAITYSVHRSSVI 194 (211)
Q Consensus 136 ~y~~~~~~~~~~g~~~~~~~~~~e~--------------~~~~~~~~~~~~~e~-----~l~~--~~~~~~~~i~Rp~~i 194 (211)
+|+.+ ..+++|+ .+ ..|...|...| ++.. ...+++++++||+.|
T Consensus 158 vyg~~-------------~~~~~E~~~~~~~~~~~~~~~~~--~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~~v 222 (404)
T 1i24_A 158 EYGTP-------------NIDIEEGYITITHNGRTDTLPYP--KQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVV 222 (404)
T ss_dssp GGCCC-------------SSCBCSSEEEEEETTEEEEEECC--CCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEE
T ss_pred HhCCC-------------CCCCCccccccccccccccccCC--CCCCChhHHHHHHHHHHHHHHHHhcCCeEEEEeccee
Confidence 88743 1234443 12 22334444333 3322 234899999999999
Q ss_pred EecCC
Q 028258 195 IGASP 199 (211)
Q Consensus 195 ~G~~~ 199 (211)
||++.
T Consensus 223 ~Gp~~ 227 (404)
T 1i24_A 223 YGVKT 227 (404)
T ss_dssp ECSCC
T ss_pred eCCCC
Confidence 99975
|
| >1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1.7e-22 Score=165.84 Aligned_cols=151 Identities=14% Similarity=0.157 Sum_probs=117.1
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccceEEeec
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITNLFWVP 90 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~~~a 90 (211)
+|||||||||||++++++|+ +|++|++++|++ + ++.+|++|++.+.+++++.. +|+|||+|
T Consensus 2 ~ilVtGatG~iG~~l~~~L~------~g~~V~~~~r~~----------~-~~~~D~~d~~~~~~~~~~~~--~d~vih~a 62 (299)
T 1n2s_A 2 NILLFGKTGQVGWELQRSLA------PVGNLIALDVHS----------K-EFCGDFSNPKGVAETVRKLR--PDVIVNAA 62 (299)
T ss_dssp EEEEECTTSHHHHHHHHHTT------TTSEEEEECTTC----------S-SSCCCTTCHHHHHHHHHHHC--CSEEEECC
T ss_pred eEEEECCCCHHHHHHHHHhh------cCCeEEEecccc----------c-cccccCCCHHHHHHHHHhcC--CCEEEECc
Confidence 69999999999999999998 479999999875 2 45789999999999998754 79999999
Q ss_pred ccCC-----chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCCCCCC
Q 028258 91 LQVQ-----ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLP 165 (211)
Q Consensus 91 ~~~~-----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~~~~~ 165 (211)
+... .++...+++|+.++.++++++.+. ++ +|+++||..+|+.. ...+++|+++.
T Consensus 63 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-----~~-~~v~~SS~~vy~~~------------~~~~~~E~~~~-- 122 (299)
T 1n2s_A 63 AHTAVDKAESEPELAQLLNATSVEAIAKAANET-----GA-WVVHYSTDYVFPGT------------GDIPWQETDAT-- 122 (299)
T ss_dssp CCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTT-----TC-EEEEEEEGGGSCCC------------TTCCBCTTSCC--
T ss_pred ccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHc-----CC-cEEEEecccEEeCC------------CCCCCCCCCCC--
Confidence 8754 245667899999999999999876 44 69999999999743 13467888764
Q ss_pred CCCcchhHHHHHhh---cCCCceEEEecCCceEecCCC
Q 028258 166 FPNFYYELEDVSAS---YSPAITYSVHRSSVIIGASPR 200 (211)
Q Consensus 166 ~~~~~~~~e~~l~~---~~~~~~~~i~Rp~~i~G~~~~ 200 (211)
.|...|...|...+ +....+++++||+.+||+...
T Consensus 123 ~p~~~Y~~sK~~~E~~~~~~~~~~~ilRp~~v~G~~~~ 160 (299)
T 1n2s_A 123 SPLNVYGKTKLAGEKALQDNCPKHLIFRTSWVYAGKGN 160 (299)
T ss_dssp CCSSHHHHHHHHHHHHHHHHCSSEEEEEECSEECSSSC
T ss_pred CCccHHHHHHHHHHHHHHHhCCCeEEEeeeeecCCCcC
Confidence 33444544443333 112348999999999998754
|
| >1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.88 E-value=3.8e-22 Score=168.49 Aligned_cols=164 Identities=20% Similarity=0.132 Sum_probs=122.8
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC---CC---------CCCCceeEEEeeCCCHHHHHHHHH
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG---WF---------PTALVDRYITFDALDPTDTALKLS 77 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~---~~---------~~~~~~~~i~~Dl~d~~~~~~~~~ 77 (211)
|+|||||||||||++++++|+ ++|++|++++|++... .. ...+++ ++.+|++|++++.++++
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~-----~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~~~~~~~ 75 (372)
T 1db3_A 2 KVALITGVTGQDGSYLAEFLL-----EKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFH-LHYGDLSDTSNLTRILR 75 (372)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-----HTTCEEEEECC---------------------CCEE-ECCCCSSCHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHH-----HCCCEEEEEECCCcccchHHHHHHhhccccCCCceE-EEECCCCCHHHHHHHHH
Confidence 689999999999999999999 6899999999976431 00 024678 88999999999999998
Q ss_pred hcccccceEEeecccCC-----chhHHHHhhcHHHHHHHHHHHHhcCCCCCCc---eEEEEeecCeeeecccCCccccCC
Q 028258 78 LISQEITNLFWVPLQVQ-----ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRL---RHVALLTGTKHYMGPIFDPSLAGQ 149 (211)
Q Consensus 78 ~~~~~~~~v~~~a~~~~-----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~---~~~~~~s~~~~y~~~~~~~~~~g~ 149 (211)
+.. +|+|||+|+... .++...+++|+.++.++++++.+. .+ ++|+++||..+|+..
T Consensus 76 ~~~--~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~~~~iv~~SS~~v~g~~--------- 139 (372)
T 1db3_A 76 EVQ--PDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFL-----GLEKKTRFYQASTSELYGLV--------- 139 (372)
T ss_dssp HHC--CSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHT-----TCTTTCEEEEEEEGGGGTTC---------
T ss_pred hcC--CCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHh-----CCCCCcEEEEeCChhhhCCC---------
Confidence 764 799999998643 245567789999999999999886 44 799999999888742
Q ss_pred CCCCCCCCcCCCCCCCCCCcchhHHH-----HHhh--cCCCceEEEecCCceEecCCC
Q 028258 150 LMPYEVPFKEDSSRLPFPNFYYELED-----VSAS--YSPAITYSVHRSSVIIGASPR 200 (211)
Q Consensus 150 ~~~~~~~~~e~~~~~~~~~~~~~~e~-----~l~~--~~~~~~~~i~Rp~~i~G~~~~ 200 (211)
...+++|+++. .|...|...| ++.. ...+++++++||+.+||++.+
T Consensus 140 ---~~~~~~E~~~~--~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gp~~~ 192 (372)
T 1db3_A 140 ---QEIPQKETTPF--YPRSPYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRG 192 (372)
T ss_dssp ---CSSSBCTTSCC--CCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSC
T ss_pred ---CCCCCCccCCC--CCCChHHHHHHHHHHHHHHHHHHhCCCeEEEEECCccCCCCC
Confidence 13467787764 2334444333 3332 235899999999999998753
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.88 E-value=2.5e-22 Score=164.42 Aligned_cols=147 Identities=15% Similarity=0.134 Sum_probs=114.9
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccceEEe
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITNLFW 88 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~~ 88 (211)
.++|||||||||||++|+++|+ ++|++|++++|+ .+|++|++++.+++++.. +|+|||
T Consensus 12 ~~~vlVtGatG~iG~~l~~~L~-----~~g~~V~~~~r~---------------~~Dl~d~~~~~~~~~~~~--~d~vih 69 (292)
T 1vl0_A 12 HMKILITGANGQLGREIQKQLK-----GKNVEVIPTDVQ---------------DLDITNVLAVNKFFNEKK--PNVVIN 69 (292)
T ss_dssp CEEEEEESTTSHHHHHHHHHHT-----TSSEEEEEECTT---------------TCCTTCHHHHHHHHHHHC--CSEEEE
T ss_pred cceEEEECCCChHHHHHHHHHH-----hCCCeEEeccCc---------------cCCCCCHHHHHHHHHhcC--CCEEEE
Confidence 4689999999999999999999 689999999985 268999999999888653 799999
Q ss_pred ecccCCc-----hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCCCC
Q 028258 89 VPLQVQE-----SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSR 163 (211)
Q Consensus 89 ~a~~~~~-----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~~~ 163 (211)
+|+.... ++...+++|+.++.++++++.+. ++ +|+++||..+|+.. ...|++|+++.
T Consensus 70 ~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~-----~~-~iv~~SS~~v~~~~------------~~~~~~E~~~~ 131 (292)
T 1vl0_A 70 CAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSV-----GA-EIVQISTDYVFDGE------------AKEPITEFDEV 131 (292)
T ss_dssp CCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHH-----TC-EEEEEEEGGGSCSC------------CSSCBCTTSCC
T ss_pred CCccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHc-----CC-eEEEechHHeECCC------------CCCCCCCCCCC
Confidence 9987542 45567899999999999999987 45 89999999888742 13467888764
Q ss_pred CCCCCcchhHHHHHhh---cCCCceEEEecCCceEec
Q 028258 164 LPFPNFYYELEDVSAS---YSPAITYSVHRSSVIIGA 197 (211)
Q Consensus 164 ~~~~~~~~~~e~~l~~---~~~~~~~~i~Rp~~i~G~ 197 (211)
.|...|...|...+ +..+.+++++||+.+||+
T Consensus 132 --~~~~~Y~~sK~~~E~~~~~~~~~~~~lR~~~v~G~ 166 (292)
T 1vl0_A 132 --NPQSAYGKTKLEGENFVKALNPKYYIVRTAWLYGD 166 (292)
T ss_dssp --CCCSHHHHHHHHHHHHHHHHCSSEEEEEECSEESS
T ss_pred --CCccHHHHHHHHHHHHHHhhCCCeEEEeeeeeeCC
Confidence 23344444333333 123347999999999998
|
| >1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=2.6e-22 Score=168.84 Aligned_cols=174 Identities=13% Similarity=0.033 Sum_probs=123.2
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCC-CcEEEEEeCCCCC--C-C----CCCCCceeEEEeeCCCHHHHHHHHHhcccc
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGS-PWKVYGAARRPPP--G-W----FPTALVDRYITFDALDPTDTALKLSLISQE 82 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~-g~~V~~~~R~~~~--~-~----~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~ 82 (211)
+|||||||||||++|+++|+ +. |++|++++|+... . . ....+++ ++.+|++|++.+.++++...
T Consensus 2 kvlVTGasG~iG~~l~~~L~-----~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~~~~~~~~~~-- 73 (361)
T 1kew_A 2 KILITGGAGFIGSAVVRHII-----KNTQDTVVNIDKLTYAGNLESLSDISESNRYN-FEHADICDSAEITRIFEQYQ-- 73 (361)
T ss_dssp EEEEESTTSHHHHHHHHHHH-----HHCSCEEEEEECCCTTCCGGGGTTTTTCTTEE-EEECCTTCHHHHHHHHHHHC--
T ss_pred EEEEECCCchHhHHHHHHHH-----hcCCCeEEEEecCCCCCchhhhhhhhcCCCeE-EEECCCCCHHHHHHHHhhcC--
Confidence 59999999999999999999 45 7999999996521 1 0 1135788 99999999999999887533
Q ss_pred cceEEeecccCCc-----hhHHHHhhcHHHHHHHHHHHHhcCCCCCCce-------EEEEeecCeeeecccCCccccCCC
Q 028258 83 ITNLFWVPLQVQE-----SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLR-------HVALLTGTKHYMGPIFDPSLAGQL 150 (211)
Q Consensus 83 ~~~v~~~a~~~~~-----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~-------~~~~~s~~~~y~~~~~~~~~~g~~ 150 (211)
+|+|||+|+.... ++...+++|+.++.++++++.+. ..+++ +|+++||..+|+..... .... .
T Consensus 74 ~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~---~~~v~~~~~~~~~iv~~SS~~v~g~~~~~-~~~~-~ 148 (361)
T 1kew_A 74 PDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKY---WSALGEDKKNNFRFHHISTDEVYGDLPHP-DEVE-N 148 (361)
T ss_dssp CSEEEECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHH---HHTSCHHHHHHCEEEEEEEGGGGCCCCCG-GGSC-T
T ss_pred CCEEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHh---ccCcccccccCceEEEeCCHHHhCCCccc-cccc-c
Confidence 7999999987542 45567899999999999999864 11344 99999999888742100 0000 0
Q ss_pred CCCCCCCcCCCCCCCCCCcchhH-----HHHHhh--cCCCceEEEecCCceEecCC
Q 028258 151 MPYEVPFKEDSSRLPFPNFYYEL-----EDVSAS--YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 151 ~~~~~~~~e~~~~~~~~~~~~~~-----e~~l~~--~~~~~~~~i~Rp~~i~G~~~ 199 (211)
.+...+++|+.+. .+...|.. |.++.. ...+++++++||+.+||+..
T Consensus 149 ~~~~~~~~E~~~~--~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~~ 202 (361)
T 1kew_A 149 SVTLPLFTETTAY--APSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYH 202 (361)
T ss_dssp TSCCCCBCTTSCC--CCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTC
T ss_pred cccCCCCCCCCCC--CCCCccHHHHHHHHHHHHHHHHHhCCcEEEEeeceeECCCC
Confidence 0011267787764 23344443 333333 23489999999999999975
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.88 E-value=5.5e-23 Score=161.51 Aligned_cols=155 Identities=17% Similarity=0.104 Sum_probs=104.7
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccceEEeec
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITNLFWVP 90 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~~~a 90 (211)
+||||||||+||++++++|+ ++|++|++++|++.+.....++++ ++.+|++|++. +++.+ +|+|||++
T Consensus 2 kvlVtGatG~iG~~l~~~L~-----~~g~~V~~~~R~~~~~~~~~~~~~-~~~~D~~d~~~--~~~~~----~d~vi~~a 69 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAK-----NRGHEVTAIVRNAGKITQTHKDIN-ILQKDIFDLTL--SDLSD----QNVVVDAY 69 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESCSHHHHHHCSSSE-EEECCGGGCCH--HHHTT----CSEEEECC
T ss_pred eEEEEcCCchhHHHHHHHHH-----hCCCEEEEEEcCchhhhhccCCCe-EEeccccChhh--hhhcC----CCEEEECC
Confidence 59999999999999999999 689999999998764211116789 99999999877 55654 78999999
Q ss_pred ccCCchhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCCCCCCCCCcc
Q 028258 91 LQVQESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFY 170 (211)
Q Consensus 91 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~~~~~~~~~~ 170 (211)
+.... ....|+.++.++++++++. +.++++++||...|.+.. + ..+..|+.+.. |..+
T Consensus 70 g~~~~----~~~~~~~~~~~l~~a~~~~-----~~~~~v~~SS~~~~~~~~------~-----~~~~~~~~~~~--~~~~ 127 (221)
T 3ew7_A 70 GISPD----EAEKHVTSLDHLISVLNGT-----VSPRLLVVGGAASLQIDE------D-----GNTLLESKGLR--EAPY 127 (221)
T ss_dssp CSSTT----TTTSHHHHHHHHHHHHCSC-----CSSEEEEECCCC--------------------------------CCC
T ss_pred cCCcc----ccchHHHHHHHHHHHHHhc-----CCceEEEEecceEEEcCC------C-----CccccccCCCC--CHHH
Confidence 87532 2567899999999999876 568889888876553211 1 12344544422 2222
Q ss_pred hh-----HHHH--HhhcCCCceEEEecCCceEecCC
Q 028258 171 YE-----LEDV--SASYSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 171 ~~-----~e~~--l~~~~~~~~~~i~Rp~~i~G~~~ 199 (211)
|. .|.+ +.+...+++|+++||+.+||+++
T Consensus 128 y~~~k~~~e~~~~~~~~~~gi~~~ivrp~~v~g~~~ 163 (221)
T 3ew7_A 128 YPTARAQAKQLEHLKSHQAEFSWTYISPSAMFEPGE 163 (221)
T ss_dssp SCCHHHHHHHHHHHHTTTTTSCEEEEECSSCCCCC-
T ss_pred HHHHHHHHHHHHHHHhhccCccEEEEeCcceecCCC
Confidence 22 2222 21116899999999999999844
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=1.5e-22 Score=170.43 Aligned_cols=165 Identities=9% Similarity=0.026 Sum_probs=119.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCC-cEEEEEeCCCCCC-CCCCCCceeEEEeeCCCHHHHHHHHHhcc-cccc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSP-WKVYGAARRPPPG-WFPTALVDRYITFDALDPTDTALKLSLIS-QEIT 84 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g-~~V~~~~R~~~~~-~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~-~~~~ 84 (211)
++++|||||||||||++|+++|+ ++| ++|++++|++... .....+++ +.+|++|++.+..++++.. ..+|
T Consensus 45 ~~~~vlVtGatG~iG~~l~~~L~-----~~g~~~V~~~~r~~~~~~~~~~~~~~--~~~d~~~~~~~~~~~~~~~~~~~d 117 (357)
T 2x6t_A 45 EGRMIIVTGGAGFIGSNIVKALN-----DKGITDILVVDNLKDGTKFVNLVDLN--IADYMDKEDFLIQIMAGEEFGDVE 117 (357)
T ss_dssp ---CEEEETTTSHHHHHHHHHHH-----HTTCCCEEEEECCSSGGGGGGTTTSC--CSEEEEHHHHHHHHHTTCCCSSCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHH-----HCCCcEEEEEecCCCcchhhcccCce--EeeecCcHHHHHHHHhhcccCCCC
Confidence 35789999999999999999999 678 8999999976532 10112222 4689999988888876410 0279
Q ss_pred eEEeecccCC---chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCC
Q 028258 85 NLFWVPLQVQ---ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDS 161 (211)
Q Consensus 85 ~v~~~a~~~~---~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~ 161 (211)
+|||+|+... .++...+++|+.++.++++++.+. ++ +|+++||..+|+.. ...+++|++
T Consensus 118 ~Vih~A~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~-----~~-r~V~~SS~~v~g~~------------~~~~~~E~~ 179 (357)
T 2x6t_A 118 AIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLER-----EI-PFLYASSAATYGGR------------TSDFIESRE 179 (357)
T ss_dssp EEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHH-----TC-CEEEEEEGGGGCSC------------SSCCCSSGG
T ss_pred EEEECCcccCCccCCHHHHHHHHHHHHHHHHHHHHHc-----CC-eEEEEcchHHhCCC------------CCCCcCCcC
Confidence 9999998754 356678899999999999999987 46 89999998888742 134677877
Q ss_pred CCCCCCCcchhH-----HHHHhh--cCCCceEEEecCCceEecCC
Q 028258 162 SRLPFPNFYYEL-----EDVSAS--YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 162 ~~~~~~~~~~~~-----e~~l~~--~~~~~~~~i~Rp~~i~G~~~ 199 (211)
+. .|...|.. |+++.. ...+++++++||+.+||+..
T Consensus 180 ~~--~p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~Gp~~ 222 (357)
T 2x6t_A 180 YE--KPLNVFGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPRE 222 (357)
T ss_dssp GC--CCSSHHHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSC
T ss_pred CC--CCCChhHHHHHHHHHHHHHHHHHcCCCEEEEecCeEECCCC
Confidence 64 23333433 444433 34589999999999999975
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} | Back alignment and structure |
|---|
Probab=99.88 E-value=6.7e-23 Score=161.63 Aligned_cols=158 Identities=13% Similarity=0.107 Sum_probs=111.2
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-CCCCCceeEEEeeCCCHHHHHHHHHhcccccceEEee
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-FPTALVDRYITFDALDPTDTALKLSLISQEITNLFWV 89 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~~~ 89 (211)
+||||||||+||++++++|+ ++|++|++++|++.+.. ....+++ ++.+|++|++. +++++ +|+|||+
T Consensus 2 kilVtGatG~iG~~l~~~L~-----~~g~~V~~~~R~~~~~~~~~~~~~~-~~~~D~~d~~~--~~~~~----~d~vi~~ 69 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEAR-----RRGHEVLAVVRDPQKAADRLGATVA-TLVKEPLVLTE--ADLDS----VDAVVDA 69 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHTCTTSE-EEECCGGGCCH--HHHTT----CSEEEEC
T ss_pred EEEEEcCCCHHHHHHHHHHH-----HCCCEEEEEEecccccccccCCCce-EEecccccccH--hhccc----CCEEEEC
Confidence 59999999999999999999 68999999999865421 1236789 99999999877 55554 7899999
Q ss_pred cccCCchhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCCCCCCCCCc
Q 028258 90 PLQVQESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNF 169 (211)
Q Consensus 90 a~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~~~~~~~~~ 169 (211)
++.... .....+|+.++.++++++++. + ++|+++||...+.... +. ...+.+|... +.|..
T Consensus 70 ag~~~~--~~~~~~n~~~~~~l~~a~~~~-----~-~~~v~~SS~~~~~~~~------~~---~~~~~~~~~~--~~~~~ 130 (224)
T 3h2s_A 70 LSVPWG--SGRGYLHLDFATHLVSLLRNS-----D-TLAVFILGSASLAMPG------AD---HPMILDFPES--AASQP 130 (224)
T ss_dssp CCCCTT--SSCTHHHHHHHHHHHHTCTTC-----C-CEEEEECCGGGSBCTT------CS---SCGGGGCCGG--GGGST
T ss_pred CccCCC--cchhhHHHHHHHHHHHHHHHc-----C-CcEEEEecceeeccCC------CC---ccccccCCCC--Cccch
Confidence 987521 112467999999999999876 5 7888888865443210 00 0112333222 22344
Q ss_pred chhHHHHHhh------cCCCceEEEecCCceEecCC
Q 028258 170 YYELEDVSAS------YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 170 ~~~~e~~l~~------~~~~~~~~i~Rp~~i~G~~~ 199 (211)
+|...|...+ +..+++|+++||+.+||++.
T Consensus 131 ~y~~sK~~~e~~~~~~~~~~i~~~ivrp~~v~g~~~ 166 (224)
T 3h2s_A 131 WYDGALYQYYEYQFLQMNANVNWIGISPSEAFPSGP 166 (224)
T ss_dssp THHHHHHHHHHHHHHTTCTTSCEEEEEECSBCCCCC
T ss_pred hhHHHHHHHHHHHHHHhcCCCcEEEEcCccccCCCc
Confidence 4543333222 36799999999999999854
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 | Back alignment and structure |
|---|
Probab=99.88 E-value=1.2e-21 Score=178.84 Aligned_cols=169 Identities=14% Similarity=0.123 Sum_probs=126.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC--------CCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW--------FPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~--------~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
++|+|||||||||||++|+++|+ ++|++|++++|+..... ....+++ ++.+|++|++++.++++..
T Consensus 10 ~~~~ilVTGatG~IG~~l~~~L~-----~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~-~v~~Dl~d~~~l~~~~~~~ 83 (699)
T 1z45_A 10 TSKIVLVTGGAGYIGSHTVVELI-----ENGYDCVVADNLSNSTYDSVARLEVLTKHHIP-FYEVDLCDRKGLEKVFKEY 83 (699)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEECCSSCCTHHHHHHHHHHTSCCC-EEECCTTCHHHHHHHHHHS
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-----HCcCEEEEEECCCcchHHHHHHHhhccCCceE-EEEcCCCCHHHHHHHHHhC
Confidence 46899999999999999999999 68999999999765321 0135688 9999999999999998865
Q ss_pred ccccceEEeecccCCc-----hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCC
Q 028258 80 SQEITNLFWVPLQVQE-----SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYE 154 (211)
Q Consensus 80 ~~~~~~v~~~a~~~~~-----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~ 154 (211)
. +|+|||+|+.... .+.+.+++|+.++.++++++++. ++++|+++||..+|+.... .. ..
T Consensus 84 ~--~D~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~-----~~~~iV~~SS~~vyg~~~~----~~----~~ 148 (699)
T 1z45_A 84 K--IDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQY-----NVSKFVFSSSATVYGDATR----FP----NM 148 (699)
T ss_dssp C--CCEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHH-----TCCEEEEEEEGGGGCCGGG----ST----TC
T ss_pred C--CCEEEECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEECcHHHhCCCcc----cc----cc
Confidence 3 7999999987542 23457899999999999999886 5789999999999874210 00 12
Q ss_pred CCCcCCCCCCCCCCcchhH-----HHHHhh--cC--CCceEEEecCCceEecCC
Q 028258 155 VPFKEDSSRLPFPNFYYEL-----EDVSAS--YS--PAITYSVHRSSVIIGASP 199 (211)
Q Consensus 155 ~~~~e~~~~~~~~~~~~~~-----e~~l~~--~~--~~~~~~i~Rp~~i~G~~~ 199 (211)
.+++|+.+. .|...|.. |.++.+ .. .+++++++||+.+||+.+
T Consensus 149 ~~~~E~~~~--~p~~~Y~~sK~~~E~~~~~~~~~~~~g~~~~ilR~~~vyG~~~ 200 (699)
T 1z45_A 149 IPIPEECPL--GPTNPYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHP 200 (699)
T ss_dssp CSBCTTSCC--CCCSHHHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCT
T ss_pred CCccccCCC--CCCChHHHHHHHHHHHHHHHHHhccCCCcEEEEEeccccCCCc
Confidence 456777663 23333433 444333 12 689999999999999865
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.87 E-value=3.5e-22 Score=165.47 Aligned_cols=166 Identities=16% Similarity=0.170 Sum_probs=115.1
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeC-CCCCCC-------CC--CCCceeEEEeeCCCHHHHHHHHHh
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAAR-RPPPGW-------FP--TALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R-~~~~~~-------~~--~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
+|+|||||||||||++|+++|+ ++|++|+++.| ++.... .. ..+++ ++.+|++|++.+.+++++
T Consensus 1 ~k~vlVTGatG~iG~~l~~~L~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~~~~~~~~ 74 (322)
T 2p4h_X 1 KGRVCVTGGTGFLGSWIIKSLL-----ENGYSVNTTIRADPERKRDVSFLTNLPGASEKLH-FFNADLSNPDSFAAAIEG 74 (322)
T ss_dssp CCEEEEESTTSHHHHHHHHHHH-----HTTCEEEEECCCC----CCCHHHHTSTTHHHHEE-ECCCCTTCGGGGHHHHTT
T ss_pred CCEEEEECChhHHHHHHHHHHH-----HCCCEEEEEEeCCccchhHHHHHHhhhccCCceE-EEecCCCCHHHHHHHHcC
Confidence 4789999999999999999999 68999999998 543210 01 12467 889999999999988875
Q ss_pred cccccceEEeecccCCc---h-hHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeee-ecccCCccccCCCCCC
Q 028258 79 ISQEITNLFWVPLQVQE---S-EEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY-MGPIFDPSLAGQLMPY 153 (211)
Q Consensus 79 ~~~~~~~v~~~a~~~~~---~-~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y-~~~~~~~~~~g~~~~~ 153 (211)
+|+|||+|+.... + +...+++|+.++.++++++.+. .++++|+++||...+ +.+. .
T Consensus 75 ----~d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~----~~~~~iV~~SS~~~~~~~~~-----------~ 135 (322)
T 2p4h_X 75 ----CVGIFHTASPIDFAVSEPEEIVTKRTVDGALGILKACVNS----KTVKRFIYTSSGSAVSFNGK-----------D 135 (322)
T ss_dssp ----CSEEEECCCCC--------CHHHHHHHHHHHHHHHHHTTC----SSCCEEEEEEEGGGTSCSSS-----------C
T ss_pred ----CCEEEEcCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEeccHHHcccCCC-----------C
Confidence 6899999965321 2 2347889999999999999864 247899999987643 3210 1
Q ss_pred CCCCcCCCCCCC------CCC-cchhHHHHHhh-------cCCCceEEEecCCceEecCC
Q 028258 154 EVPFKEDSSRLP------FPN-FYYELEDVSAS-------YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 154 ~~~~~e~~~~~~------~~~-~~~~~e~~l~~-------~~~~~~~~i~Rp~~i~G~~~ 199 (211)
..+++|+++... .|. +.|...|.+.+ ...+++++++||+.+||+..
T Consensus 136 ~~~~~e~~~~~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~g~~~ 195 (322)
T 2p4h_X 136 KDVLDESDWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQNGIDVVTLILPFIVGRFV 195 (322)
T ss_dssp CSEECTTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECEEESCCC
T ss_pred CeecCCccccchhhhcccCcccccHHHHHHHHHHHHHHHHHhcCCcEEEEcCCceECCCC
Confidence 234566543110 111 23444443332 23689999999999999965
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=1e-21 Score=152.44 Aligned_cols=151 Identities=13% Similarity=0.074 Sum_probs=112.3
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCC-CCCCceeEEEeeCCCHHHHHHHHHhcccccceEEe
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF-PTALVDRYITFDALDPTDTALKLSLISQEITNLFW 88 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~-~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~~ 88 (211)
++||||||||+||++++++|+ ++|++|++++|++.+... ...+++ ++.+|++|++++.+++++ +|+|||
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~-----~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~----~d~vi~ 73 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAV-----QAGYEVTVLVRDSSRLPSEGPRPAH-VVVGDVLQAADVDKTVAG----QDAVIV 73 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHH-----HTTCEEEEEESCGGGSCSSSCCCSE-EEESCTTSHHHHHHHHTT----CSEEEE
T ss_pred CEEEEEcCCcHHHHHHHHHHH-----HCCCeEEEEEeChhhcccccCCceE-EEEecCCCHHHHHHHHcC----CCEEEE
Confidence 689999999999999999999 689999999998764321 246789 999999999999998876 689999
Q ss_pred ecccCCchhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCCCCCCCCC
Q 028258 89 VPLQVQESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPN 168 (211)
Q Consensus 89 ~a~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~~~~~~~~ 168 (211)
+++.... ....++|+.++.++++++.+. ++++|+++||..+|+... . .+ .+.
T Consensus 74 ~a~~~~~--~~~~~~n~~~~~~~~~~~~~~-----~~~~~v~~Ss~~~~~~~~------------~------~~---~~~ 125 (206)
T 1hdo_A 74 LLGTRND--LSPTTVMSEGARNIVAAMKAH-----GVDKVVACTSAFLLWDPT------------K------VP---PRL 125 (206)
T ss_dssp CCCCTTC--CSCCCHHHHHHHHHHHHHHHH-----TCCEEEEECCGGGTSCTT------------C------SC---GGG
T ss_pred CccCCCC--CCccchHHHHHHHHHHHHHHh-----CCCeEEEEeeeeeccCcc------------c------cc---ccc
Confidence 9986543 112357899999999999887 578999999987765310 0 01 022
Q ss_pred cchhHHHHHhh---cCCCceEEEecCCceEecCC
Q 028258 169 FYYELEDVSAS---YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 169 ~~~~~e~~l~~---~~~~~~~~i~Rp~~i~G~~~ 199 (211)
..|...|...+ +..+++|+++||+.+ |+.+
T Consensus 126 ~~y~~~K~~~e~~~~~~~i~~~~lrp~~~-~~~~ 158 (206)
T 1hdo_A 126 QAVTDDHIRMHKVLRESGLKYVAVMPPHI-GDQP 158 (206)
T ss_dssp HHHHHHHHHHHHHHHHTCSEEEEECCSEE-ECCC
T ss_pred hhHHHHHHHHHHHHHhCCCCEEEEeCCcc-cCCC
Confidence 22333333222 347899999999997 4443
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.87 E-value=1.9e-21 Score=155.22 Aligned_cols=157 Identities=12% Similarity=0.056 Sum_probs=109.1
Q ss_pred CCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCC-cEEEEEeCCCCCCC-CCCCCceeEEEeeCCCHHHHHHHHHhccccc
Q 028258 6 QNPKSVALIIGVTGISGLSLAEALKNPTTPGSP-WKVYGAARRPPPGW-FPTALVDRYITFDALDPTDTALKLSLISQEI 83 (211)
Q Consensus 6 ~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g-~~V~~~~R~~~~~~-~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~ 83 (211)
+||+|+||||||||+||++|+++|+ ++| ++|++++|++.+.. ....+++ ++.+|++|++++.+++++ +
T Consensus 20 ~~~mk~vlVtGatG~iG~~l~~~L~-----~~G~~~V~~~~R~~~~~~~~~~~~~~-~~~~Dl~d~~~~~~~~~~----~ 89 (236)
T 3qvo_A 20 QGHMKNVLILGAGGQIARHVINQLA-----DKQTIKQTLFARQPAKIHKPYPTNSQ-IIMGDVLNHAALKQAMQG----Q 89 (236)
T ss_dssp --CCEEEEEETTTSHHHHHHHHHHT-----TCTTEEEEEEESSGGGSCSSCCTTEE-EEECCTTCHHHHHHHHTT----C
T ss_pred cCcccEEEEEeCCcHHHHHHHHHHH-----hCCCceEEEEEcChhhhcccccCCcE-EEEecCCCHHHHHHHhcC----C
Confidence 4556899999999999999999999 688 99999999876532 2346789 999999999999999986 6
Q ss_pred ceEEeecccCCchhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCCCC
Q 028258 84 TNLFWVPLQVQESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSR 163 (211)
Q Consensus 84 ~~v~~~a~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~~~ 163 (211)
|+|||+++.... ...++++++++++. ++++|+++||..+|+.... ...+..+..+.
T Consensus 90 D~vv~~a~~~~~---------~~~~~~~~~~~~~~-----~~~~iV~iSS~~~~~~~~~----------~~~~~~~~~~~ 145 (236)
T 3qvo_A 90 DIVYANLTGEDL---------DIQANSVIAAMKAC-----DVKRLIFVLSLGIYDEVPG----------KFVEWNNAVIG 145 (236)
T ss_dssp SEEEEECCSTTH---------HHHHHHHHHHHHHT-----TCCEEEEECCCCC--------------------------C
T ss_pred CEEEEcCCCCch---------hHHHHHHHHHHHHc-----CCCEEEEEecceecCCCCc----------ccccchhhccc
Confidence 889999875321 12356889999876 5789999999888864210 01122222221
Q ss_pred CCCCCcchhHHHHHhhcCCCceEEEecCCceEecCC
Q 028258 164 LPFPNFYYELEDVSASYSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 164 ~~~~~~~~~~e~~l~~~~~~~~~~i~Rp~~i~G~~~ 199 (211)
.....|...++.+. ..+++++++||+.++++..
T Consensus 146 -~~~~~~~~~~~~l~--~~gi~~~~vrPg~i~~~~~ 178 (236)
T 3qvo_A 146 -EPLKPFRRAADAIE--ASGLEYTILRPAWLTDEDI 178 (236)
T ss_dssp -GGGHHHHHHHHHHH--TSCSEEEEEEECEEECCSC
T ss_pred -chHHHHHHHHHHHH--HCCCCEEEEeCCcccCCCC
Confidence 11123444555554 4799999999999999754
|
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 | Back alignment and structure |
|---|
Probab=99.87 E-value=1.3e-21 Score=177.62 Aligned_cols=165 Identities=16% Similarity=0.183 Sum_probs=123.1
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCC-CcEEEEEeCCCCCCC--CCCCCceeEEEeeCCCHHH-HHHHHHhcccc
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGS-PWKVYGAARRPPPGW--FPTALVDRYITFDALDPTD-TALKLSLISQE 82 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~-g~~V~~~~R~~~~~~--~~~~~~~~~i~~Dl~d~~~-~~~~~~~~~~~ 82 (211)
+++++|||||||||||++|+++|+ +. |++|++++|++.... ....+++ ++.+|++|+++ +.+++++
T Consensus 313 ~~~~~VLVTGatG~IG~~l~~~Ll-----~~~g~~V~~~~r~~~~~~~~~~~~~v~-~v~~Dl~d~~~~~~~~~~~---- 382 (660)
T 1z7e_A 313 RRRTRVLILGVNGFIGNHLTERLL-----REDHYEVYGLDIGSDAISRFLNHPHFH-FVEGDISIHSEWIEYHVKK---- 382 (660)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHH-----HSSSEEEEEEESCCTTTGGGTTCTTEE-EEECCTTTCHHHHHHHHHH----
T ss_pred ccCceEEEEcCCcHHHHHHHHHHH-----hcCCCEEEEEEcCchhhhhhccCCceE-EEECCCCCcHHHHHHhhcC----
Confidence 345789999999999999999999 45 899999999865421 1246788 99999999765 6667765
Q ss_pred cceEEeecccCCc-----hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCC
Q 028258 83 ITNLFWVPLQVQE-----SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPF 157 (211)
Q Consensus 83 ~~~v~~~a~~~~~-----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~ 157 (211)
+|+|||+|+.... ++.+.+++|+.++.++++++.+. + ++|+++||..+|+... ..++
T Consensus 383 ~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~-----~-~r~V~~SS~~vyg~~~------------~~~~ 444 (660)
T 1z7e_A 383 CDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKY-----R-KRIIFPSTSEVYGMCS------------DKYF 444 (660)
T ss_dssp CSEEEECCCCCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHT-----T-CEEEEECCGGGGBTCC------------SSSB
T ss_pred CCEEEECceecCccccccCHHHHHHhhhHHHHHHHHHHHHh-----C-CEEEEEecHHHcCCCC------------Cccc
Confidence 7899999987542 34567789999999999999886 4 7999999999987431 2456
Q ss_pred cCCCCCC-----CCCCcchhH-----HHHHhh--cCCCceEEEecCCceEecCC
Q 028258 158 KEDSSRL-----PFPNFYYEL-----EDVSAS--YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 158 ~e~~~~~-----~~~~~~~~~-----e~~l~~--~~~~~~~~i~Rp~~i~G~~~ 199 (211)
+|+++.. ..|...|.. |.++.+ +..+++++++||+.+||+..
T Consensus 445 ~E~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRpg~v~Gp~~ 498 (660)
T 1z7e_A 445 DEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRL 498 (660)
T ss_dssp CTTTCCEEECCTTCTTHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEESTTS
T ss_pred CCCccccccCcccCCCCCcHHHHHHHHHHHHHHHHHcCCCEEEECCCcccCCCc
Confidence 6766421 123333443 333332 23589999999999999875
|
| >4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.87 E-value=3.6e-22 Score=172.29 Aligned_cols=174 Identities=14% Similarity=0.082 Sum_probs=120.9
Q ss_pred ccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC-------------------CCCCCCceeEEEe
Q 028258 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-------------------WFPTALVDRYITF 64 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~-------------------~~~~~~~~~~i~~ 64 (211)
|..+.+++|||||||||||++|+++|+ +.|++|++++|++... .....+++ ++.+
T Consensus 64 ~~~~~~~~vlVTGatG~iG~~l~~~L~-----~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~-~v~~ 137 (427)
T 4f6c_A 64 LSHRPLGNTLLTGATGFLGAYLIEALQ-----GYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIE-VIVG 137 (427)
T ss_dssp SCCCCCEEEEEECTTSHHHHHHHHHHT-----TTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEE-EEEE
T ss_pred CCCCCCCEEEEecCCcHHHHHHHHHHH-----cCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceE-EEeC
Confidence 334446789999999999999999998 6899999999987610 00126788 9999
Q ss_pred eCCCHHHHHHHHHhcccccceEEeecccCC--chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccC
Q 028258 65 DALDPTDTALKLSLISQEITNLFWVPLQVQ--ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIF 142 (211)
Q Consensus 65 Dl~d~~~~~~~~~~~~~~~~~v~~~a~~~~--~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~ 142 (211)
|++|++.+. .... +|+|||+|+... .++...+++|+.++.++++++.+. +++|+++||..+ |....
T Consensus 138 Dl~d~~~l~----~~~~-~d~Vih~A~~~~~~~~~~~~~~~Nv~g~~~l~~aa~~~------~~~~v~~SS~~~-G~~~~ 205 (427)
T 4f6c_A 138 DFECMDDVV----LPEN-MDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQH------HARLIYVSTISV-GTYFD 205 (427)
T ss_dssp CC---CCCC----CSSC-CSEEEECCCCC-------CHHHHHHHHHHHHHHHHHHT------TCEEEEEEEGGG-GSEEC
T ss_pred CCCCcccCC----CcCC-CCEEEECCcccCCCCCHHHHHHHHHHHHHHHHHHHHhc------CCcEEEECchHh-CCCcc
Confidence 999987766 2222 899999998754 356667899999999999999863 478999998877 43211
Q ss_pred CccccCCCCCCCCCCcCCCCCCC-CCCcchhHHHH-----Hhh-cCCCceEEEecCCceEecCCCCC
Q 028258 143 DPSLAGQLMPYEVPFKEDSSRLP-FPNFYYELEDV-----SAS-YSPAITYSVHRSSVIIGASPRSL 202 (211)
Q Consensus 143 ~~~~~g~~~~~~~~~~e~~~~~~-~~~~~~~~e~~-----l~~-~~~~~~~~i~Rp~~i~G~~~~~~ 202 (211)
+ .....+++|+++..+ .+...|...|+ +.+ ...+++++++||+.|||+.....
T Consensus 206 -----~--~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~g~~~~ivRpg~v~G~~~~~~ 265 (427)
T 4f6c_A 206 -----I--DTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVNNGLDGRIVRVGNLTSPYNGRW 265 (427)
T ss_dssp -----S--SCSCCEECTTCSCSSCCCCSHHHHHHHHHHHHHHHHHHTTCCEEEEEECCEESCSSSCC
T ss_pred -----C--CCCCccccccccccCCCCCCchHHHHHHHHHHHHHHHHcCCCEEEEeCCeeecCCCCCc
Confidence 0 012457788876322 23444544443 333 33799999999999999987554
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.87 E-value=2e-22 Score=157.80 Aligned_cols=146 Identities=16% Similarity=0.141 Sum_probs=112.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCc--EEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccce
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPW--KVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITN 85 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~--~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~ 85 (211)
|+++||||||||+||++++++|+ ++|+ +|++++|++.+ ..++++ ++.+|++|++++.+++ +|.
T Consensus 4 ~~~~vlVtGatG~iG~~l~~~l~-----~~g~~~~V~~~~r~~~~---~~~~~~-~~~~D~~~~~~~~~~~------~d~ 68 (215)
T 2a35_A 4 TPKRVLLAGATGLTGEHLLDRIL-----SEPTLAKVIAPARKALA---EHPRLD-NPVGPLAELLPQLDGS------IDT 68 (215)
T ss_dssp CCCEEEEECTTSHHHHHHHHHHH-----HCTTCCEEECCBSSCCC---CCTTEE-CCBSCHHHHGGGCCSC------CSE
T ss_pred CCceEEEECCCcHHHHHHHHHHH-----hCCCCCeEEEEeCCCcc---cCCCce-EEeccccCHHHHHHhh------hcE
Confidence 46789999999999999999999 6787 99999998765 246788 8899999887655544 589
Q ss_pred EEeecccCC---chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCCC
Q 028258 86 LFWVPLQVQ---ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSS 162 (211)
Q Consensus 86 v~~~a~~~~---~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~~ 162 (211)
|||+++... .++...+++|+.++.++++++.+. ++++|+++||..+|+.
T Consensus 69 vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~~v~~Ss~~~~~~----------------------- 120 (215)
T 2a35_A 69 AFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEM-----GARHYLVVSALGADAK----------------------- 120 (215)
T ss_dssp EEECCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHT-----TCCEEEEECCTTCCTT-----------------------
T ss_pred EEECeeeccccCCCHHHHHHhhHHHHHHHHHHHHHc-----CCCEEEEECCcccCCC-----------------------
Confidence 999998754 356677899999999999999886 5789999998765531
Q ss_pred CCCCCCcchhHHHHHhh---cCCCce-EEEecCCceEecCCC
Q 028258 163 RLPFPNFYYELEDVSAS---YSPAIT-YSVHRSSVIIGASPR 200 (211)
Q Consensus 163 ~~~~~~~~~~~e~~l~~---~~~~~~-~~i~Rp~~i~G~~~~ 200 (211)
+...|...|...+ +..+++ ++++||+.+||+...
T Consensus 121 ----~~~~y~~sK~~~e~~~~~~~~~~~~~vrp~~v~g~~~~ 158 (215)
T 2a35_A 121 ----SSIFYNRVKGELEQALQEQGWPQLTIARPSLLFGPREE 158 (215)
T ss_dssp ----CSSHHHHHHHHHHHHHTTSCCSEEEEEECCSEESTTSC
T ss_pred ----CccHHHHHHHHHHHHHHHcCCCeEEEEeCceeeCCCCc
Confidence 1122333333322 346898 999999999998653
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.87 E-value=2.2e-22 Score=160.36 Aligned_cols=156 Identities=10% Similarity=0.095 Sum_probs=113.6
Q ss_pred CCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-CCCCCc-eeEEEeeCCCHHHHHHHHHhccccc
Q 028258 6 QNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-FPTALV-DRYITFDALDPTDTALKLSLISQEI 83 (211)
Q Consensus 6 ~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-~~~~~~-~~~i~~Dl~d~~~~~~~~~~~~~~~ 83 (211)
..++|+||||||||+||++++++|+ ++|++|++++|++.+.. ....++ + ++.+|++ +.+.+.+++ +
T Consensus 18 ~l~~~~ilVtGatG~iG~~l~~~L~-----~~G~~V~~~~R~~~~~~~~~~~~~~~-~~~~Dl~--~~~~~~~~~----~ 85 (236)
T 3e8x_A 18 YFQGMRVLVVGANGKVARYLLSELK-----NKGHEPVAMVRNEEQGPELRERGASD-IVVANLE--EDFSHAFAS----I 85 (236)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESSGGGHHHHHHTTCSE-EEECCTT--SCCGGGGTT----C
T ss_pred CcCCCeEEEECCCChHHHHHHHHHH-----hCCCeEEEEECChHHHHHHHhCCCce-EEEcccH--HHHHHHHcC----C
Confidence 4457899999999999999999999 68999999999876421 112477 8 9999999 455555553 7
Q ss_pred ceEEeecccCC-chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCCC
Q 028258 84 TNLFWVPLQVQ-ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSS 162 (211)
Q Consensus 84 ~~v~~~a~~~~-~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~~ 162 (211)
|+|||+|+... .++...+++|+.++.++++++++. ++++|+++||...+. .+..+
T Consensus 86 D~vi~~ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~-----~~~~iv~~SS~~~~~-------------------~~~~~ 141 (236)
T 3e8x_A 86 DAVVFAAGSGPHTGADKTILIDLWGAIKTIQEAEKR-----GIKRFIMVSSVGTVD-------------------PDQGP 141 (236)
T ss_dssp SEEEECCCCCTTSCHHHHHHTTTHHHHHHHHHHHHH-----TCCEEEEECCTTCSC-------------------GGGSC
T ss_pred CEEEECCCCCCCCCccccchhhHHHHHHHHHHHHHc-----CCCEEEEEecCCCCC-------------------CCCCh
Confidence 99999998754 467788999999999999999887 578999998832221 11111
Q ss_pred CCCCCCcchhHHHHHhh---cCCCceEEEecCCceEecCCC
Q 028258 163 RLPFPNFYYELEDVSAS---YSPAITYSVHRSSVIIGASPR 200 (211)
Q Consensus 163 ~~~~~~~~~~~e~~l~~---~~~~~~~~i~Rp~~i~G~~~~ 200 (211)
.+...|...|...+ +..+++++++||+.++|+...
T Consensus 142 ---~~~~~Y~~sK~~~e~~~~~~gi~~~~lrpg~v~~~~~~ 179 (236)
T 3e8x_A 142 ---MNMRHYLVAKRLADDELKRSSLDYTIVRPGPLSNEEST 179 (236)
T ss_dssp ---GGGHHHHHHHHHHHHHHHHSSSEEEEEEECSEECSCCC
T ss_pred ---hhhhhHHHHHHHHHHHHHHCCCCEEEEeCCcccCCCCC
Confidence 12223333332222 358999999999999998653
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.87 E-value=5.2e-22 Score=163.48 Aligned_cols=162 Identities=10% Similarity=0.036 Sum_probs=118.9
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCC-cEEEEEeCCCCCCCC-CCCCceeEEEeeCCCHHHHHHHHHhcc-cccceEE
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSP-WKVYGAARRPPPGWF-PTALVDRYITFDALDPTDTALKLSLIS-QEITNLF 87 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g-~~V~~~~R~~~~~~~-~~~~~~~~i~~Dl~d~~~~~~~~~~~~-~~~~~v~ 87 (211)
+|||||||||||++|+++|+ ++| ++|++++|++..... ...+++ +.+|++|.+.+.+++++.. ..+|+||
T Consensus 1 ~vlVtGatG~iG~~l~~~L~-----~~g~~~V~~~~r~~~~~~~~~~~~~~--~~~d~~~~~~~~~~~~~~~~~~~d~vi 73 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALN-----DKGITDILVVDNLKDGTKFVNLVDLN--IADYMDKEDFLIQIMAGEEFGDVEAIF 73 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHH-----TTTCCCEEEEECCSSGGGGHHHHTSC--CSEEEEHHHHHHHHHTTCCCSSCCEEE
T ss_pred CEEEEcCccHHHHHHHHHHH-----HCCCcEEEEEccCCCCchhhhcCcce--eccccccHHHHHHHHhccccCCCcEEE
Confidence 48999999999999999999 688 899999987653210 001222 4689999888888877520 0179999
Q ss_pred eecccCC---chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCCCCC
Q 028258 88 WVPLQVQ---ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRL 164 (211)
Q Consensus 88 ~~a~~~~---~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~~~~ 164 (211)
|+|+... .++...+++|+.++.++++++.+. ++ +|+++||..+|+.. ...+++|+++.
T Consensus 74 ~~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-----~~-~~v~~SS~~v~g~~------------~~~~~~E~~~~- 134 (310)
T 1eq2_A 74 HEGACSSTTEWDGKYMMDNNYQYSKELLHYCLER-----EI-PFLYASSAATYGGR------------TSDFIESREYE- 134 (310)
T ss_dssp ECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHH-----TC-CEEEEEEGGGGTTC------------CSCBCSSGGGC-
T ss_pred ECcccccCcccCHHHHHHHHHHHHHHHHHHHHHc-----CC-eEEEEeeHHHhCCC------------CCCCCCCCCCC-
Confidence 9998754 356678899999999999999987 56 89999998888742 12366777763
Q ss_pred CCCCcchhH-----HHHHhh--cCCCceEEEecCCceEecCC
Q 028258 165 PFPNFYYEL-----EDVSAS--YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 165 ~~~~~~~~~-----e~~l~~--~~~~~~~~i~Rp~~i~G~~~ 199 (211)
.|...|.. |.++.+ ...+++++++||+.+||+..
T Consensus 135 -~p~~~Y~~sK~~~e~~~~~~~~~~g~~~~~lrp~~v~G~~~ 175 (310)
T 1eq2_A 135 -KPLNVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPRE 175 (310)
T ss_dssp -CCSSHHHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSC
T ss_pred -CCCChhHHHHHHHHHHHHHHHHHcCCCEEEEeCCcEECcCC
Confidence 23333433 444433 34689999999999999875
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=2.7e-21 Score=161.95 Aligned_cols=160 Identities=17% Similarity=0.187 Sum_probs=115.2
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC------CCCCCCceeEEEeeCCCHHHHHHHHHhcc
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG------WFPTALVDRYITFDALDPTDTALKLSLIS 80 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~------~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~ 80 (211)
+++++|||||||||||++|+++|+ +.|++|++++|+.... +....+++ ++.+|+.|+. + .
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~-----~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~-----~---~ 90 (343)
T 2b69_A 25 KDRKRILITGGAGFVGSHLTDKLM-----MDGHEVTVVDNFFTGRKRNVEHWIGHENFE-LINHDVVEPL-----Y---I 90 (343)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEECCSSCCGGGTGGGTTCTTEE-EEECCTTSCC-----C---C
T ss_pred cCCCEEEEEcCccHHHHHHHHHHH-----HCCCEEEEEeCCCccchhhhhhhccCCceE-EEeCccCChh-----h---c
Confidence 346789999999999999999999 6899999999975421 11235688 9999998853 2 2
Q ss_pred cccceEEeecccCCc-----hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCC
Q 028258 81 QEITNLFWVPLQVQE-----SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEV 155 (211)
Q Consensus 81 ~~~~~v~~~a~~~~~-----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~ 155 (211)
. +|+|||+|+.... ++...+++|+.++.++++++.+. ++ +|+++||..+|+... ..
T Consensus 91 ~-~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-----~~-~~v~~SS~~v~g~~~------------~~ 151 (343)
T 2b69_A 91 E-VDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRV-----GA-RLLLASTSEVYGDPE------------VH 151 (343)
T ss_dssp C-CSEEEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHH-----TC-EEEEEEEGGGGBSCS------------SS
T ss_pred C-CCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHh-----CC-cEEEECcHHHhCCCC------------CC
Confidence 2 7999999987542 45567899999999999999886 34 789999988887431 23
Q ss_pred CCcCCCCC---CCCCCcchhH-----HHHHhh--cCCCceEEEecCCceEecCC
Q 028258 156 PFKEDSSR---LPFPNFYYEL-----EDVSAS--YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 156 ~~~e~~~~---~~~~~~~~~~-----e~~l~~--~~~~~~~~i~Rp~~i~G~~~ 199 (211)
+++|+... ...+...|.. |.++.. +..+++++++||+.+||+..
T Consensus 152 ~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~ 205 (343)
T 2b69_A 152 PQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRM 205 (343)
T ss_dssp SBCTTCCCBCCSSSTTHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTC
T ss_pred CCcccccccCCCCCCCCchHHHHHHHHHHHHHHHHHhCCcEEEEEEcceeCcCC
Confidence 55665311 0123333443 333332 23589999999999999974
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A | Back alignment and structure |
|---|
Probab=99.86 E-value=1.8e-22 Score=168.33 Aligned_cols=170 Identities=16% Similarity=0.100 Sum_probs=121.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-C-------CCCCceeEE-EeeCCCHHHHHHHHHh
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-F-------PTALVDRYI-TFDALDPTDTALKLSL 78 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-~-------~~~~~~~~i-~~Dl~d~~~~~~~~~~ 78 (211)
++++|||||||||||++++++|+ ++|++|++++|++.+.. . ...+++ ++ .+|++|++.+.+++++
T Consensus 10 ~~~~vlVTGatG~iG~~l~~~L~-----~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~D~~d~~~~~~~~~~ 83 (342)
T 1y1p_A 10 EGSLVLVTGANGFVASHVVEQLL-----EHGYKVRGTARSASKLANLQKRWDAKYPGRFE-TAVVEDMLKQGAYDEVIKG 83 (342)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESSHHHHHHHHHHHHHHSTTTEE-EEECSCTTSTTTTTTTTTT
T ss_pred CCCEEEEECCccHHHHHHHHHHH-----HCCCEEEEEeCCcccHHHHHHHhhccCCCceE-EEEecCCcChHHHHHHHcC
Confidence 46789999999999999999999 68999999999754210 0 024678 88 7999999887777663
Q ss_pred cccccceEEeecccCC--chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCC
Q 028258 79 ISQEITNLFWVPLQVQ--ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVP 156 (211)
Q Consensus 79 ~~~~~~~v~~~a~~~~--~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~ 156 (211)
+|+|||+|+... .++...+++|+.++.++++++.+. .++++|+++||..+|+.+.. .. ...|
T Consensus 84 ----~d~vih~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~----~~~~~iv~~SS~~~~~~~~~-----~~---~~~~ 147 (342)
T 1y1p_A 84 ----AAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAAT----PSVKRFVLTSSTVSALIPKP-----NV---EGIY 147 (342)
T ss_dssp ----CSEEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTC----TTCCEEEEECCGGGTCCCCT-----TC---CCCE
T ss_pred ----CCEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhC----CCCcEEEEeccHHHhcCCCC-----CC---CCcc
Confidence 799999998754 356778899999999999999853 25789999999888854211 00 0135
Q ss_pred CcCCCCC-----------C---CCCCcchhH-----HHHHhh----cCCCceEEEecCCceEecCC
Q 028258 157 FKEDSSR-----------L---PFPNFYYEL-----EDVSAS----YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 157 ~~e~~~~-----------~---~~~~~~~~~-----e~~l~~----~~~~~~~~i~Rp~~i~G~~~ 199 (211)
++|++.. . ..|...|.. |.++.. ...+++++++||+.+||+..
T Consensus 148 ~~E~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~ 213 (342)
T 1y1p_A 148 LDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIF 213 (342)
T ss_dssp ECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCS
T ss_pred cCccccCchhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCC
Confidence 6666520 0 112233443 333332 12489999999999999865
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=8.6e-22 Score=157.40 Aligned_cols=157 Identities=14% Similarity=0.087 Sum_probs=112.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCC--CcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccce
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGS--PWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITN 85 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~--g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~ 85 (211)
++++||||||||+||++++++|+ ++ |++|++++|++.+......+++ ++.+|++|++++.+++++ +|+
T Consensus 3 ~~~~ilVtGasG~iG~~l~~~l~-----~~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~D~~d~~~~~~~~~~----~d~ 72 (253)
T 1xq6_A 3 NLPTVLVTGASGRTGQIVYKKLK-----EGSDKFVAKGLVRSAQGKEKIGGEAD-VFIGDITDADSINPAFQG----IDA 72 (253)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHH-----HTTTTCEEEEEESCHHHHHHTTCCTT-EEECCTTSHHHHHHHHTT----CSE
T ss_pred CCCEEEEEcCCcHHHHHHHHHHH-----hcCCCcEEEEEEcCCCchhhcCCCee-EEEecCCCHHHHHHHHcC----CCE
Confidence 35789999999999999999999 46 8999999997643211135688 999999999999998875 689
Q ss_pred EEeecccCCc------------------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCcccc
Q 028258 86 LFWVPLQVQE------------------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLA 147 (211)
Q Consensus 86 v~~~a~~~~~------------------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~ 147 (211)
|||+++.... .+...+++|+.++.++++++.+. ++++|+++||...+.
T Consensus 73 vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~iv~~SS~~~~~--------- 138 (253)
T 1xq6_A 73 LVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA-----GVKHIVVVGSMGGTN--------- 138 (253)
T ss_dssp EEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH-----TCSEEEEEEETTTTC---------
T ss_pred EEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHc-----CCCEEEEEcCccCCC---------
Confidence 9999976421 11235689999999999999887 568999998865431
Q ss_pred CCCCCCCCCCcCCCCCCCCCCcchhHHHHHhh---cCCCceEEEecCCceEecCC
Q 028258 148 GQLMPYEVPFKEDSSRLPFPNFYYELEDVSAS---YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 148 g~~~~~~~~~~e~~~~~~~~~~~~~~e~~l~~---~~~~~~~~i~Rp~~i~G~~~ 199 (211)
+..+..+.....|...|...+ +..+++++++||+.+||+..
T Consensus 139 -----------~~~~~~~~~~~~y~~sK~~~e~~~~~~~i~~~~vrpg~v~~~~~ 182 (253)
T 1xq6_A 139 -----------PDHPLNKLGNGNILVWKRKAEQYLADSGTPYTIIRAGGLLDKEG 182 (253)
T ss_dssp -----------TTCGGGGGGGCCHHHHHHHHHHHHHTSSSCEEEEEECEEECSCS
T ss_pred -----------CCCccccccchhHHHHHHHHHHHHHhCCCceEEEecceeecCCc
Confidence 111100001111222222222 35799999999999999864
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} | Back alignment and structure |
|---|
Probab=99.86 E-value=8.8e-22 Score=160.77 Aligned_cols=152 Identities=18% Similarity=0.244 Sum_probs=111.7
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-CCCCCceeEEEeeCCCHHHHHHHHHhcccccceEE
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-FPTALVDRYITFDALDPTDTALKLSLISQEITNLF 87 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~ 87 (211)
+++|||||| ||||++|+++|+ ++||+|++++|++.+.. ....+++ ++.+|++|.+ +.. +|+||
T Consensus 5 ~~~ilVtGa-G~iG~~l~~~L~-----~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~D~~d~~--------~~~-~d~vi 68 (286)
T 3ius_A 5 TGTLLSFGH-GYTARVLSRALA-----PQGWRIIGTSRNPDQMEAIRASGAE-PLLWPGEEPS--------LDG-VTHLL 68 (286)
T ss_dssp CCEEEEETC-CHHHHHHHHHHG-----GGTCEEEEEESCGGGHHHHHHTTEE-EEESSSSCCC--------CTT-CCEEE
T ss_pred cCcEEEECC-cHHHHHHHHHHH-----HCCCEEEEEEcChhhhhhHhhCCCe-EEEecccccc--------cCC-CCEEE
Confidence 378999998 999999999999 68999999999876421 1236789 9999999943 223 89999
Q ss_pred eecccCCchhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCCCCCCCC
Q 028258 88 WVPLQVQESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFP 167 (211)
Q Consensus 88 ~~a~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~~~~~~~ 167 (211)
|+|+...... ..+.++++++++. ..++++|+++||..+|+.+ ...+++|+++. .|
T Consensus 69 ~~a~~~~~~~--------~~~~~l~~a~~~~---~~~~~~~v~~Ss~~vyg~~------------~~~~~~E~~~~--~p 123 (286)
T 3ius_A 69 ISTAPDSGGD--------PVLAALGDQIAAR---AAQFRWVGYLSTTAVYGDH------------DGAWVDETTPL--TP 123 (286)
T ss_dssp ECCCCBTTBC--------HHHHHHHHHHHHT---GGGCSEEEEEEEGGGGCCC------------TTCEECTTSCC--CC
T ss_pred ECCCcccccc--------HHHHHHHHHHHhh---cCCceEEEEeecceecCCC------------CCCCcCCCCCC--CC
Confidence 9998754321 1246788888873 2367899999999999753 13467888874 34
Q ss_pred CcchhHHHHHhh---c-CCCceEEEecCCceEecCCCC
Q 028258 168 NFYYELEDVSAS---Y-SPAITYSVHRSSVIIGASPRS 201 (211)
Q Consensus 168 ~~~~~~e~~l~~---~-~~~~~~~i~Rp~~i~G~~~~~ 201 (211)
...|...|+..+ . ..+++++++||+.+||++.+.
T Consensus 124 ~~~Y~~sK~~~E~~~~~~~~~~~~ilRp~~v~G~~~~~ 161 (286)
T 3ius_A 124 TAARGRWRVMAEQQWQAVPNLPLHVFRLAGIYGPGRGP 161 (286)
T ss_dssp CSHHHHHHHHHHHHHHHSTTCCEEEEEECEEEBTTBSS
T ss_pred CCHHHHHHHHHHHHHHhhcCCCEEEEeccceECCCchH
Confidence 445554444333 1 259999999999999997543
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=1.4e-21 Score=164.47 Aligned_cols=148 Identities=18% Similarity=0.147 Sum_probs=114.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCC-Cc-EEEEEeCCCCCCC-----CCCCCceeEEEeeCCCHHHHHHHHHhcc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGS-PW-KVYGAARRPPPGW-----FPTALVDRYITFDALDPTDTALKLSLIS 80 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~-g~-~V~~~~R~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~~~~ 80 (211)
.+|+||||||||+||++++++|+ +. |+ +|++++|++.+.. ....+++ ++.+|++|++.+.+++++
T Consensus 20 ~~k~vlVTGatG~iG~~l~~~L~-----~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~-~~~~Dl~d~~~l~~~~~~-- 91 (344)
T 2gn4_A 20 DNQTILITGGTGSFGKCFVRKVL-----DTTNAKKIIVYSRDELKQSEMAMEFNDPRMR-FFIGDVRDLERLNYALEG-- 91 (344)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHH-----HHCCCSEEEEEESCHHHHHHHHHHHCCTTEE-EEECCTTCHHHHHHHTTT--
T ss_pred CCCEEEEECCCcHHHHHHHHHHH-----hhCCCCEEEEEECChhhHHHHHHHhcCCCEE-EEECCCCCHHHHHHHHhc--
Confidence 35899999999999999999999 57 87 9999999754310 1135788 999999999999888875
Q ss_pred cccceEEeecccCCc-----hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCC
Q 028258 81 QEITNLFWVPLQVQE-----SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEV 155 (211)
Q Consensus 81 ~~~~~v~~~a~~~~~-----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~ 155 (211)
+|+|||+|+.... ++.+.+++|+.++.++++++.+. ++++|+++||...|.
T Consensus 92 --~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~-----~v~~~V~~SS~~~~~----------------- 147 (344)
T 2gn4_A 92 --VDICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKN-----AISQVIALSTDKAAN----------------- 147 (344)
T ss_dssp --CSEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHT-----TCSEEEEECCGGGSS-----------------
T ss_pred --CCEEEECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhC-----CCCEEEEecCCccCC-----------------
Confidence 7899999987542 34567899999999999999987 678999998753321
Q ss_pred CCcCCCCCCCCCCcchh-----HHHHHhh-c----CCCceEEEecCCceEecC
Q 028258 156 PFKEDSSRLPFPNFYYE-----LEDVSAS-Y----SPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 156 ~~~e~~~~~~~~~~~~~-----~e~~l~~-~----~~~~~~~i~Rp~~i~G~~ 198 (211)
|...|. .|+++.. . ..+++++++||+++||+.
T Consensus 148 -----------p~~~Y~~sK~~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~ 189 (344)
T 2gn4_A 148 -----------PINLYGATKLCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSR 189 (344)
T ss_dssp -----------CCSHHHHHHHHHHHHHHHGGGCCCSSCCEEEEECCCEETTCT
T ss_pred -----------CccHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEEeccEECCC
Confidence 112233 3444443 1 268999999999999975
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A | Back alignment and structure |
|---|
Probab=99.86 E-value=5.6e-22 Score=158.21 Aligned_cols=148 Identities=17% Similarity=0.093 Sum_probs=113.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCc--EEEEEeCCCCCCC-CCCCCceeEEEeeCCCHHHHHHHHHhcccccc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPW--KVYGAARRPPPGW-FPTALVDRYITFDALDPTDTALKLSLISQEIT 84 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~--~V~~~~R~~~~~~-~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~ 84 (211)
++|++|||||||+||++++++|+ ++|+ +|++++|++.+.. ....+++ ++.+|++|++++.+++++ +|
T Consensus 17 ~~~~vlVtGasg~iG~~l~~~L~-----~~G~~~~V~~~~r~~~~~~~~~~~~~~-~~~~D~~d~~~~~~~~~~----~d 86 (242)
T 2bka_A 17 QNKSVFILGASGETGRVLLKEIL-----EQGLFSKVTLIGRRKLTFDEEAYKNVN-QEVVDFEKLDDYASAFQG----HD 86 (242)
T ss_dssp TCCEEEEECTTSHHHHHHHHHHH-----HHTCCSEEEEEESSCCCCCSGGGGGCE-EEECCGGGGGGGGGGGSS----CS
T ss_pred cCCeEEEECCCcHHHHHHHHHHH-----cCCCCCEEEEEEcCCCCccccccCCce-EEecCcCCHHHHHHHhcC----CC
Confidence 45899999999999999999999 6899 9999999876532 1235688 999999999888777764 78
Q ss_pred eEEeecccCCc--hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCCC
Q 028258 85 NLFWVPLQVQE--SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSS 162 (211)
Q Consensus 85 ~v~~~a~~~~~--~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~~ 162 (211)
+|||+++.... .+...+++|+.++.++++++.+. ++++|+++||...|+.
T Consensus 87 ~vi~~ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~~-----~~~~iv~~SS~~~~~~----------------------- 138 (242)
T 2bka_A 87 VGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAG-----GCKHFNLLSSKGADKS----------------------- 138 (242)
T ss_dssp EEEECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHT-----TCCEEEEECCTTCCTT-----------------------
T ss_pred EEEECCCcccccCCcccceeeeHHHHHHHHHHHHHC-----CCCEEEEEccCcCCCC-----------------------
Confidence 99999987532 45567889999999999999876 5689999998765531
Q ss_pred CCCCCCcchh----HHHHHhhcCCCc-eEEEecCCceEecC
Q 028258 163 RLPFPNFYYE----LEDVSASYSPAI-TYSVHRSSVIIGAS 198 (211)
Q Consensus 163 ~~~~~~~~~~----~e~~l~~~~~~~-~~~i~Rp~~i~G~~ 198 (211)
+...|.. .|.++ +..++ +++++||+.++|+.
T Consensus 139 ---~~~~Y~~sK~~~e~~~--~~~~~~~~~~vrpg~v~~~~ 174 (242)
T 2bka_A 139 ---SNFLYLQVKGEVEAKV--EELKFDRYSVFRPGVLLCDR 174 (242)
T ss_dssp ---CSSHHHHHHHHHHHHH--HTTCCSEEEEEECCEEECTT
T ss_pred ---CcchHHHHHHHHHHHH--HhcCCCCeEEEcCceecCCC
Confidence 1122322 23333 34677 69999999999985
|
| >4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.86 E-value=6e-22 Score=174.63 Aligned_cols=170 Identities=14% Similarity=0.059 Sum_probs=120.7
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC-------------------CCCCCCceeEEEeeCCCH
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-------------------WFPTALVDRYITFDALDP 69 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~-------------------~~~~~~~~~~i~~Dl~d~ 69 (211)
+++|||||||||||++|+++|+ +.|++|++++|++... .....+++ ++.+|++|+
T Consensus 150 ~~~VLVTGatG~iG~~l~~~L~-----~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~-~v~~Dl~d~ 223 (508)
T 4f6l_B 150 LGNTLLTGATGFLGAYLIEALQ-----GYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIE-VIVGDFECM 223 (508)
T ss_dssp CEEEEESCTTSHHHHHHHHHTB-----TTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEE-EEEEBTTBC
T ss_pred CCeEEEECCccchHHHHHHHHH-----hcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceE-EEecCCccc
Confidence 4789999999999999999998 6899999999987620 00136789 999999997
Q ss_pred HHHHHHHHhcccccceEEeecccCC--chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCcccc
Q 028258 70 TDTALKLSLISQEITNLFWVPLQVQ--ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLA 147 (211)
Q Consensus 70 ~~~~~~~~~~~~~~~~v~~~a~~~~--~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~ 147 (211)
+.+. ... .+|+|||+|+... .++...+++|+.++.++++++.+. .++|+++||..+ |....
T Consensus 224 ~~l~----~~~-~~D~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~------~~~~v~iSS~~v-G~~~~----- 286 (508)
T 4f6l_B 224 DDVV----LPE-NMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQH------HARLIYVSTISV-GTYFD----- 286 (508)
T ss_dssp SSCC----CSS-CCSEEEECCCC--------CCHHHHHHHHHHHHHHHHTT------TCEEEEEEESCT-TSEEC-----
T ss_pred ccCC----Ccc-CCCEEEECCceecCCCCHHHHhhhHHHHHHHHHHHHHhC------CCcEEEeCChhh-ccCCc-----
Confidence 7655 222 2899999998754 245566789999999999999763 478999999877 32110
Q ss_pred CCCCCCCCCCcCCCCCCC-CCCcchhH-----HHHHhh-cCCCceEEEecCCceEecCCCCCC
Q 028258 148 GQLMPYEVPFKEDSSRLP-FPNFYYEL-----EDVSAS-YSPAITYSVHRSSVIIGASPRSLY 203 (211)
Q Consensus 148 g~~~~~~~~~~e~~~~~~-~~~~~~~~-----e~~l~~-~~~~~~~~i~Rp~~i~G~~~~~~~ 203 (211)
. .....+++|+++..+ .+...|.. |+++.+ ...|++++++||+.|||+..+.++
T Consensus 287 ~--~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~ 347 (508)
T 4f6l_B 287 I--DTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVNNGLDGRIVRVGNLTSPYNGRWH 347 (508)
T ss_dssp T--TCSCCEECTTCSCSSBCCCSHHHHHHHHHHHHHHHHHHTTCEEEEEEECCEESCSSSCCC
T ss_pred c--CCcCcccccccccccccCCCcHHHHHHHHHHHHHHHHHcCCCEEEEecceeccCCCCCcc
Confidence 0 012456788776321 23344444 444433 337999999999999999876553
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.86 E-value=6.7e-22 Score=173.28 Aligned_cols=165 Identities=14% Similarity=0.079 Sum_probs=121.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCC---CcEEEEEeCCCCCC--------CCC--------------CCCceeEE
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGS---PWKVYGAARRPPPG--------WFP--------------TALVDRYI 62 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~---g~~V~~~~R~~~~~--------~~~--------------~~~~~~~i 62 (211)
.+|+|||||||||||++|+++|+ +. |++|++++|++... .+. ..+++ ++
T Consensus 72 ~~~~VLVTGatG~IG~~l~~~Ll-----~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~-~v 145 (478)
T 4dqv_A 72 ELRTVLLTGATGFLGRYLVLELL-----RRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLE-VV 145 (478)
T ss_dssp CCCEEEEECTTSHHHHHHHHHHH-----HHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEE-EE
T ss_pred CCCEEEEECCCcHHHHHHHHHHH-----hcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceE-EE
Confidence 35899999999999999999999 45 89999999986531 001 25789 99
Q ss_pred EeeCC------CHHHHHHHHHhcccccceEEeecccCCc-hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 63 TFDAL------DPTDTALKLSLISQEITNLFWVPLQVQE-SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 63 ~~Dl~------d~~~~~~~~~~~~~~~~~v~~~a~~~~~-~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
.+|++ |.+.+.+.+++ +|+|||+|+.... ++.+.+++|+.++.++++++.+. ++++|+++||..
T Consensus 146 ~~Dl~~~~~gld~~~~~~~~~~----~D~Vih~Aa~~~~~~~~~~~~~Nv~gt~~ll~aa~~~-----~~~~~V~iSS~~ 216 (478)
T 4dqv_A 146 AGDKSEPDLGLDQPMWRRLAET----VDLIVDSAAMVNAFPYHELFGPNVAGTAELIRIALTT-----KLKPFTYVSTAD 216 (478)
T ss_dssp ECCTTSGGGGCCHHHHHHHHHH----CCEEEECCSSCSBSSCCEEHHHHHHHHHHHHHHHTSS-----SCCCEEEEEEGG
T ss_pred EeECCCcccCCCHHHHHHHHcC----CCEEEECccccCCcCHHHHHHHHHHHHHHHHHHHHhC-----CCCeEEEEeehh
Confidence 99998 55677777775 7899999987543 44467789999999999999876 678999999988
Q ss_pred eeecccCCccccCCCCCCCCCCcCCCCCCC-CC--------CcchhHHHH-----Hhh--cCCCceEEEecCCceEecCC
Q 028258 136 HYMGPIFDPSLAGQLMPYEVPFKEDSSRLP-FP--------NFYYELEDV-----SAS--YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 136 ~y~~~~~~~~~~g~~~~~~~~~~e~~~~~~-~~--------~~~~~~e~~-----l~~--~~~~~~~~i~Rp~~i~G~~~ 199 (211)
+|+... ..+++|+.+..+ .+ ...|...|+ +.+ ...+++++++||+.|||++.
T Consensus 217 v~~~~~------------~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~G~~~ 284 (478)
T 4dqv_A 217 VGAAIE------------PSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTS 284 (478)
T ss_dssp GGTTSC------------TTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECCSS
T ss_pred hcCccC------------CCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECceeeCCCc
Confidence 886421 235566554211 01 122443333 333 22589999999999999865
|
| >4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.85 E-value=2.2e-20 Score=153.64 Aligned_cols=150 Identities=20% Similarity=0.197 Sum_probs=106.0
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccceEEeec
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITNLFWVP 90 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~~~a 90 (211)
+|||||||||||++|+++|+ ++||+|++++|++.+. .+..|..+ ...++. +|.|+|++
T Consensus 2 kILVTGatGfIG~~L~~~L~-----~~G~~V~~l~R~~~~~---------~~~~~~~~-------~~~l~~-~d~vihla 59 (298)
T 4b4o_A 2 RVLVGGGTGFIGTALTQLLN-----ARGHEVTLVSRKPGPG---------RITWDELA-------ASGLPS-CDAAVNLA 59 (298)
T ss_dssp EEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESSCCTT---------EEEHHHHH-------HHCCCS-CSEEEECC
T ss_pred EEEEECCCCHHHHHHHHHHH-----HCCCEEEEEECCCCcC---------eeecchhh-------HhhccC-CCEEEEec
Confidence 59999999999999999999 7999999999986532 23333211 123333 79999999
Q ss_pred ccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCC
Q 028258 91 LQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDS 161 (211)
Q Consensus 91 ~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~ 161 (211)
+..-. .....++.|+.++.+|++++... ..+...+++.||+.+|+.. ...+.+|++
T Consensus 60 ~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~---~~~~~~~i~~Ss~~vyg~~------------~~~~~~E~~ 124 (298)
T 4b4o_A 60 GENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKA---PQPPKAWVLVTGVAYYQPS------------LTAEYDEDS 124 (298)
T ss_dssp CCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHC---SSCCSEEEEEEEGGGSCCC------------SSCCBCTTC
T ss_pred cCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHh---CCCceEEEEEeeeeeecCC------------CCCcccccC
Confidence 75311 22346688999999999999876 4456678889999999753 245678888
Q ss_pred CCCCCCCcchhHH--HHHhh---cCCCceEEEecCCceEecCC
Q 028258 162 SRLPFPNFYYELE--DVSAS---YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 162 ~~~~~~~~~~~~e--~~l~~---~~~~~~~~i~Rp~~i~G~~~ 199 (211)
|. .+..++... ++..+ ...+++++++||+.+||+..
T Consensus 125 p~--~~~~~~~~~~~~~e~~~~~~~~~~~~~~~r~~~v~g~~~ 165 (298)
T 4b4o_A 125 PG--GDFDFFSNLVTKWEAAARLPGDSTRQVVVRSGVVLGRGG 165 (298)
T ss_dssp CC--SCSSHHHHHHHHHHHHHCCSSSSSEEEEEEECEEECTTS
T ss_pred Cc--cccchhHHHHHHHHHHHHhhccCCceeeeeeeeEEcCCC
Confidence 74 233333221 11111 46789999999999999874
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.84 E-value=4.3e-20 Score=149.48 Aligned_cols=148 Identities=15% Similarity=0.098 Sum_probs=115.0
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccceEEeec
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITNLFWVP 90 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~~~a 90 (211)
+|||||||||||++++++|+ + |++|++++|++... .+ +.+|++|++++.+++++.. +|+|||+|
T Consensus 2 ~ilVtGatG~iG~~l~~~L~-----~-g~~V~~~~r~~~~~----~~----~~~Dl~~~~~~~~~~~~~~--~d~vi~~a 65 (273)
T 2ggs_A 2 RTLITGASGQLGIELSRLLS-----E-RHEVIKVYNSSEIQ----GG----YKLDLTDFPRLEDFIIKKR--PDVIINAA 65 (273)
T ss_dssp CEEEETTTSHHHHHHHHHHT-----T-TSCEEEEESSSCCT----TC----EECCTTSHHHHHHHHHHHC--CSEEEECC
T ss_pred EEEEECCCChhHHHHHHHHh-----c-CCeEEEecCCCcCC----CC----ceeccCCHHHHHHHHHhcC--CCEEEECC
Confidence 59999999999999999999 4 69999999987431 12 6799999999999988764 79999999
Q ss_pred ccCCc-----hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCCCCCC
Q 028258 91 LQVQE-----SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLP 165 (211)
Q Consensus 91 ~~~~~-----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~~~~~ 165 (211)
+.... ++...+++|+.++.++++++.+. +. +|+++||..+|+.. ..+++|+++.
T Consensus 66 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~-~iv~~SS~~~~~~~-------------~~~~~e~~~~-- 124 (273)
T 2ggs_A 66 AMTDVDKCEIEKEKAYKINAEAVRHIVRAGKVI-----DS-YIVHISTDYVFDGE-------------KGNYKEEDIP-- 124 (273)
T ss_dssp CCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-----TC-EEEEEEEGGGSCSS-------------SCSBCTTSCC--
T ss_pred cccChhhhhhCHHHHHHHhHHHHHHHHHHHHHh-----CC-eEEEEecceeEcCC-------------CCCcCCCCCC--
Confidence 87542 45567899999999999999876 34 78999998888632 2366777763
Q ss_pred CCCcchhHHHHHhh--cCCCceEEEecCCceEe
Q 028258 166 FPNFYYELEDVSAS--YSPAITYSVHRSSVIIG 196 (211)
Q Consensus 166 ~~~~~~~~e~~l~~--~~~~~~~~i~Rp~~i~G 196 (211)
.|...|...|...+ ... ++++++||+.+||
T Consensus 125 ~~~~~Y~~sK~~~e~~~~~-~~~~~iR~~~v~G 156 (273)
T 2ggs_A 125 NPINYYGLSKLLGETFALQ-DDSLIIRTSGIFR 156 (273)
T ss_dssp CCSSHHHHHHHHHHHHHCC-TTCEEEEECCCBS
T ss_pred CCCCHHHHHHHHHHHHHhC-CCeEEEecccccc
Confidence 33445555555444 122 8899999999998
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=2e-20 Score=147.53 Aligned_cols=148 Identities=13% Similarity=0.093 Sum_probs=108.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC-CCC-C--CCCCceeEEEeeCCCHHHHHHHHHhccccc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP-PGW-F--PTALVDRYITFDALDPTDTALKLSLISQEI 83 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~-~~~-~--~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~ 83 (211)
|+|+||||||||+||++++++|++ +.|++|++++|++. +.. + ...+++ ++.+|++|++++.+++++ +
T Consensus 4 mmk~vlVtGasg~iG~~~~~~l~~----~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~D~~d~~~~~~~~~~----~ 74 (221)
T 3r6d_A 4 MYXYITILGAAGQIAQXLTATLLT----YTDMHITLYGRQLKTRIPPEIIDHERVT-VIEGSFQNPGXLEQAVTN----A 74 (221)
T ss_dssp SCSEEEEESTTSHHHHHHHHHHHH----HCCCEEEEEESSHHHHSCHHHHTSTTEE-EEECCTTCHHHHHHHHTT----C
T ss_pred eEEEEEEEeCCcHHHHHHHHHHHh----cCCceEEEEecCccccchhhccCCCceE-EEECCCCCHHHHHHHHcC----C
Confidence 447899999999999999999983 38999999999876 432 1 346788 999999999999999875 6
Q ss_pred ceEEeecccCCchhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcC-CCC
Q 028258 84 TNLFWVPLQVQESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKE-DSS 162 (211)
Q Consensus 84 ~~v~~~a~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e-~~~ 162 (211)
|+|||+++.. |+. ++++++++++. ++++|+++||...|..... +..+ ..+
T Consensus 75 d~vv~~ag~~----------n~~-~~~~~~~~~~~-----~~~~iv~iSs~~~~~~~~~-------------~~~~~~~~ 125 (221)
T 3r6d_A 75 EVVFVGAMES----------GSD-MASIVKALSRX-----NIRRVIGVSMAGLSGEFPV-------------ALEKWTFD 125 (221)
T ss_dssp SEEEESCCCC----------HHH-HHHHHHHHHHT-----TCCEEEEEEETTTTSCSCH-------------HHHHHHHH
T ss_pred CEEEEcCCCC----------Chh-HHHHHHHHHhc-----CCCeEEEEeeceecCCCCc-------------cccccccc
Confidence 8999999754 333 78899999876 5789999999877753100 0000 000
Q ss_pred CCCCCCcchh----HHHHHhhcCCCceEEEecCCceEec
Q 028258 163 RLPFPNFYYE----LEDVSASYSPAITYSVHRSSVIIGA 197 (211)
Q Consensus 163 ~~~~~~~~~~----~e~~l~~~~~~~~~~i~Rp~~i~G~ 197 (211)
.....|.. .|.++ +..+++|+++||+.++++
T Consensus 126 --~~~~~y~~~K~~~e~~~--~~~~i~~~~vrpg~v~~~ 160 (221)
T 3r6d_A 126 --NLPISYVQGERQARNVL--RESNLNYTILRLTWLYND 160 (221)
T ss_dssp --TSCHHHHHHHHHHHHHH--HHSCSEEEEEEECEEECC
T ss_pred --ccccHHHHHHHHHHHHH--HhCCCCEEEEechhhcCC
Confidence 01112333 23333 347999999999999998
|
| >3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.83 E-value=1.2e-20 Score=166.72 Aligned_cols=153 Identities=16% Similarity=0.144 Sum_probs=112.0
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccceEEe
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITNLFW 88 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~~ 88 (211)
+++|||||||||||++|+++|+ +.||+|++++|++.+. + .+.+|+.+. +.+++++ +|+|||
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~-----~~G~~V~~l~R~~~~~-------~-~v~~d~~~~--~~~~l~~----~D~Vih 207 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQ-----TGGHEVIQLVRKEPKP-------G-KRFWDPLNP--ASDLLDG----ADVLVH 207 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHH-----HTTCEEEEEESSSCCT-------T-CEECCTTSC--CTTTTTT----CSEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHH-----HCCCEEEEEECCCCCc-------c-ceeecccch--hHHhcCC----CCEEEE
Confidence 4689999999999999999999 6899999999987642 3 567888753 2233332 799999
Q ss_pred ecccCC------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeee-cccCCccccCCCCCCCCCCcCCC
Q 028258 89 VPLQVQ------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYM-GPIFDPSLAGQLMPYEVPFKEDS 161 (211)
Q Consensus 89 ~a~~~~------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~-~~~~~~~~~g~~~~~~~~~~e~~ 161 (211)
+|+... ..+...+++|+.++.++++++... .++++|+++||+.+|+ .+ ...+++|+.
T Consensus 208 ~A~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~----~~~~r~V~~SS~~vyg~~~------------~~~~~~E~~ 271 (516)
T 3oh8_A 208 LAGEPIFGRFNDSHKEAIRESRVLPTKFLAELVAES----TQCTTMISASAVGFYGHDR------------GDEILTEES 271 (516)
T ss_dssp CCCC-----CCGGGHHHHHHHTHHHHHHHHHHHHHC----SSCCEEEEEEEGGGGCSEE------------EEEEECTTS
T ss_pred CCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhc----CCCCEEEEeCcceEecCCC------------CCCccCCCC
Confidence 998742 234567899999999999984443 2678999999999997 32 134677877
Q ss_pred CCCCCCCcchhH-----HHHHhh-cCCCceEEEecCCceEecCC
Q 028258 162 SRLPFPNFYYEL-----EDVSAS-YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 162 ~~~~~~~~~~~~-----e~~l~~-~~~~~~~~i~Rp~~i~G~~~ 199 (211)
+. +..+|.. |..+.. ...+++++++||+.+||++.
T Consensus 272 ~~---~~~~y~~~~~~~E~~~~~~~~~gi~~~ilRp~~v~Gp~~ 312 (516)
T 3oh8_A 272 ES---GDDFLAEVCRDWEHATAPASDAGKRVAFIRTGVALSGRG 312 (516)
T ss_dssp CC---CSSHHHHHHHHHHHTTHHHHHTTCEEEEEEECEEEBTTB
T ss_pred CC---CcChHHHHHHHHHHHHHHHHhCCCCEEEEEeeEEECCCC
Confidence 64 3333332 222222 35799999999999999863
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A | Back alignment and structure |
|---|
Probab=99.83 E-value=7.8e-21 Score=156.28 Aligned_cols=150 Identities=16% Similarity=0.062 Sum_probs=111.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCC-cEEEEEeCCCCCCC---CCCCCceeEEEeeCCCHHHHHHHHHhccccc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSP-WKVYGAARRPPPGW---FPTALVDRYITFDALDPTDTALKLSLISQEI 83 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g-~~V~~~~R~~~~~~---~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~ 83 (211)
++|+||||||||+||++++++|+ ++| ++|++++|++.+.. +...+++ ++.+|++|++++.+++++ +
T Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~-----~~g~~~V~~~~R~~~~~~~~~l~~~~~~-~~~~D~~d~~~l~~~~~~----~ 73 (299)
T 2wm3_A 4 DKKLVVVFGGTGAQGGSVARTLL-----EDGTFKVRVVTRNPRKKAAKELRLQGAE-VVQGDQDDQVIMELALNG----A 73 (299)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHH-----HHCSSEEEEEESCTTSHHHHHHHHTTCE-EEECCTTCHHHHHHHHTT----C
T ss_pred CCCEEEEECCCchHHHHHHHHHH-----hcCCceEEEEEcCCCCHHHHHHHHCCCE-EEEecCCCHHHHHHHHhc----C
Confidence 35789999999999999999999 567 99999999876421 1135788 999999999999999886 6
Q ss_pred ceEEeecccCCchhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCCCC
Q 028258 84 TNLFWVPLQVQESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSR 163 (211)
Q Consensus 84 ~~v~~~a~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~~~ 163 (211)
|.|||+++.... ...+.|+.++.++++++++. ++++|+++|+..+|+.+ +..
T Consensus 74 d~vi~~a~~~~~---~~~~~~~~~~~~~~~aa~~~-----gv~~iv~~S~~~~~~~~------------------~~~-- 125 (299)
T 2wm3_A 74 YATFIVTNYWES---CSQEQEVKQGKLLADLARRL-----GLHYVVYSGLENIKKLT------------------AGR-- 125 (299)
T ss_dssp SEEEECCCHHHH---TCHHHHHHHHHHHHHHHHHH-----TCSEEEECCCCCHHHHT------------------TTS--
T ss_pred CEEEEeCCCCcc---ccchHHHHHHHHHHHHHHHc-----CCCEEEEEcCccccccC------------------CCc--
Confidence 889999864211 12345778899999999887 67899997776655321 111
Q ss_pred CCCCCcch----hHHHHHhhcCCCceEEEecCCceEecCC
Q 028258 164 LPFPNFYY----ELEDVSASYSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 164 ~~~~~~~~----~~e~~l~~~~~~~~~~i~Rp~~i~G~~~ 199 (211)
.+..|+ ..|+++. ..+++|+++||+.+||+..
T Consensus 126 --~~~~y~~sK~~~e~~~~--~~gi~~~ilrp~~~~~~~~ 161 (299)
T 2wm3_A 126 --LAAAHFDGKGEVEEYFR--DIGVPMTSVRLPCYFENLL 161 (299)
T ss_dssp --CCCHHHHHHHHHHHHHH--HHTCCEEEEECCEEGGGGG
T ss_pred --ccCchhhHHHHHHHHHH--HCCCCEEEEeecHHhhhch
Confidence 122333 2344443 3689999999999999753
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D | Back alignment and structure |
|---|
Probab=99.83 E-value=2e-20 Score=152.64 Aligned_cols=144 Identities=13% Similarity=0.079 Sum_probs=108.3
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCC--CcEEEEEeCCCCCCC-CCCCCceeEEEeeCCCHHHHHHHHHhcccccceE
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGS--PWKVYGAARRPPPGW-FPTALVDRYITFDALDPTDTALKLSLISQEITNL 86 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~--g~~V~~~~R~~~~~~-~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v 86 (211)
|+|||||||||||++++++|+ ++ |++|++++|++.+.. ....+++ ++.+|++|++++.+++++ +|+|
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~-----~~~~g~~V~~~~r~~~~~~~l~~~~~~-~~~~D~~d~~~l~~~~~~----~d~v 70 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLL-----KKVPASQIIAIVRNVEKASTLADQGVE-VRHGDYNQPESLQKAFAG----VSKL 70 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHT-----TTSCGGGEEEEESCTTTTHHHHHTTCE-EEECCTTCHHHHHHHTTT----CSEE
T ss_pred CeEEEEcCCchHHHHHHHHHH-----HhCCCCeEEEEEcCHHHHhHHhhcCCe-EEEeccCCHHHHHHHHhc----CCEE
Confidence 469999999999999999999 56 899999999865421 1125788 999999999999988875 6899
Q ss_pred EeecccCCchhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCCCCCCC
Q 028258 87 FWVPLQVQESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPF 166 (211)
Q Consensus 87 ~~~a~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~~~~~~ 166 (211)
||+++.... . ++|+.++.++++++.+. ++++|+++||..+|.. +. +.
T Consensus 71 i~~a~~~~~---~--~~n~~~~~~l~~a~~~~-----~~~~~v~~Ss~~~~~~----------------------~~-~y 117 (287)
T 2jl1_A 71 LFISGPHYD---N--TLLIVQHANVVKAARDA-----GVKHIAYTGYAFAEES----------------------II-PL 117 (287)
T ss_dssp EECCCCCSC---H--HHHHHHHHHHHHHHHHT-----TCSEEEEEEETTGGGC----------------------CS-TH
T ss_pred EEcCCCCcC---c--hHHHHHHHHHHHHHHHc-----CCCEEEEECCCCCCCC----------------------CC-ch
Confidence 999986422 1 56899999999999886 6789999998654310 00 00
Q ss_pred CCcchhHHHHHhhcCCCceEEEecCCceEecC
Q 028258 167 PNFYYELEDVSASYSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 167 ~~~~~~~e~~l~~~~~~~~~~i~Rp~~i~G~~ 198 (211)
...+...|+++. ..+++++++||+.++|+.
T Consensus 118 ~~~K~~~E~~~~--~~~~~~~ilrp~~~~~~~ 147 (287)
T 2jl1_A 118 AHVHLATEYAIR--TTNIPYTFLRNALYTDFF 147 (287)
T ss_dssp HHHHHHHHHHHH--HTTCCEEEEEECCBHHHH
T ss_pred HHHHHHHHHHHH--HcCCCeEEEECCEecccc
Confidence 111223344444 378999999999988864
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.82 E-value=6.5e-20 Score=149.95 Aligned_cols=143 Identities=13% Similarity=0.163 Sum_probs=107.4
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCC-CcEEEEEeCCCCCCC-CCCCCceeEEEeeCCCHHHHHHHHHhcccccceEEe
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGS-PWKVYGAARRPPPGW-FPTALVDRYITFDALDPTDTALKLSLISQEITNLFW 88 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~-g~~V~~~~R~~~~~~-~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~~ 88 (211)
+||||||||+||++++++|+ +. |++|++++|++.+.. ....+++ ++.+|++|++++.+++++ +|.|||
T Consensus 2 ~ilVtGatG~iG~~l~~~L~-----~~~g~~V~~~~R~~~~~~~~~~~~v~-~~~~D~~d~~~l~~~~~~----~d~vi~ 71 (289)
T 3e48_A 2 NIMLTGATGHLGTHITNQAI-----ANHIDHFHIGVRNVEKVPDDWRGKVS-VRQLDYFNQESMVEAFKG----MDTVVF 71 (289)
T ss_dssp CEEEETTTSHHHHHHHHHHH-----HTTCTTEEEEESSGGGSCGGGBTTBE-EEECCTTCHHHHHHHTTT----CSEEEE
T ss_pred EEEEEcCCchHHHHHHHHHh-----hCCCCcEEEEECCHHHHHHhhhCCCE-EEEcCCCCHHHHHHHHhC----CCEEEE
Confidence 59999999999999999998 45 899999999876532 2346899 999999999999999886 689999
Q ss_pred ecccCCchhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCCCCCCCCC
Q 028258 89 VPLQVQESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPN 168 (211)
Q Consensus 89 ~a~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~~~~~~~~ 168 (211)
+++..... ..|+.++.++++++++. ++++|+++|| |+.. +..+. ....
T Consensus 72 ~a~~~~~~-----~~~~~~~~~l~~aa~~~-----gv~~iv~~Ss---~~~~------------------~~~~~-~~~~ 119 (289)
T 3e48_A 72 IPSIIHPS-----FKRIPEVENLVYAAKQS-----GVAHIIFIGY---YADQ------------------HNNPF-HMSP 119 (289)
T ss_dssp CCCCCCSH-----HHHHHHHHHHHHHHHHT-----TCCEEEEEEE---SCCS------------------TTCCS-TTHH
T ss_pred eCCCCccc-----hhhHHHHHHHHHHHHHc-----CCCEEEEEcc---cCCC------------------CCCCC-ccch
Confidence 99875432 23788889999999987 6789999987 3211 11111 0111
Q ss_pred cchhHHHHHhhcCCCceEEEecCCceEec
Q 028258 169 FYYELEDVSASYSPAITYSVHRSSVIIGA 197 (211)
Q Consensus 169 ~~~~~e~~l~~~~~~~~~~i~Rp~~i~G~ 197 (211)
.+...++.+. ..+++|+++||+.++|+
T Consensus 120 ~~~~~e~~~~--~~g~~~~ilrp~~~~~~ 146 (289)
T 3e48_A 120 YFGYASRLLS--TSGIDYTYVRMAMYMDP 146 (289)
T ss_dssp HHHHHHHHHH--HHCCEEEEEEECEESTT
T ss_pred hHHHHHHHHH--HcCCCEEEEeccccccc
Confidence 1222344444 36899999999999986
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=1e-19 Score=152.70 Aligned_cols=148 Identities=13% Similarity=0.007 Sum_probs=107.9
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC--------CCCCCceeEEEeeCCCHHHHHHHHHhcc
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW--------FPTALVDRYITFDALDPTDTALKLSLIS 80 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~--------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~ 80 (211)
+++||||||||+||++|+++|+ +.|++|++++|++.... +...+++ ++.+|++|.+++.++++...
T Consensus 10 ~~~IlVtGatG~iG~~l~~~L~-----~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~-~~~~Dl~d~~~l~~~~~~~~ 83 (346)
T 3i6i_A 10 KGRVLIAGATGFIGQFVATASL-----DAHRPTYILARPGPRSPSKAKIFKALEDKGAI-IVYGLINEQEAMEKILKEHE 83 (346)
T ss_dssp -CCEEEECTTSHHHHHHHHHHH-----HTTCCEEEEECSSCCCHHHHHHHHHHHHTTCE-EEECCTTCHHHHHHHHHHTT
T ss_pred CCeEEEECCCcHHHHHHHHHHH-----HCCCCEEEEECCCCCChhHHHHHHHHHhCCcE-EEEeecCCHHHHHHHHhhCC
Confidence 4689999999999999999999 67899999999873211 1136789 99999999999999998433
Q ss_pred cccceEEeecccCCchhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCC
Q 028258 81 QEITNLFWVPLQVQESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKED 160 (211)
Q Consensus 81 ~~~~~v~~~a~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~ 160 (211)
+|+|||+++.. |+.++.++++++.+. + .+++|++ | .|+. +.+|.
T Consensus 84 --~d~Vi~~a~~~----------n~~~~~~l~~aa~~~---g-~v~~~v~-S---~~g~----------------~~~e~ 127 (346)
T 3i6i_A 84 --IDIVVSTVGGE----------SILDQIALVKAMKAV---G-TIKRFLP-S---EFGH----------------DVNRA 127 (346)
T ss_dssp --CCEEEECCCGG----------GGGGHHHHHHHHHHH---C-CCSEEEC-S---CCSS----------------CTTTC
T ss_pred --CCEEEECCchh----------hHHHHHHHHHHHHHc---C-CceEEee-c---ccCC----------------CCCcc
Confidence 78999999763 777788999999987 2 2888875 2 3432 23444
Q ss_pred CCCCCCCCcchhHHHHHhh---cCCCceEEEecCCceEecCCC
Q 028258 161 SSRLPFPNFYYELEDVSAS---YSPAITYSVHRSSVIIGASPR 200 (211)
Q Consensus 161 ~~~~~~~~~~~~~e~~l~~---~~~~~~~~i~Rp~~i~G~~~~ 200 (211)
.+. .|...|...|+..+ +..+++|+++||+.++|....
T Consensus 128 ~~~--~p~~~y~~sK~~~e~~l~~~g~~~tivrpg~~~g~~~~ 168 (346)
T 3i6i_A 128 DPV--EPGLNMYREKRRVRQLVEESGIPFTYICCNSIASWPYY 168 (346)
T ss_dssp CCC--TTHHHHHHHHHHHHHHHHHTTCCBEEEECCEESSCCCS
T ss_pred CcC--CCcchHHHHHHHHHHHHHHcCCCEEEEEecccccccCc
Confidence 442 23222332333222 347899999999999997643
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.80 E-value=1.4e-18 Score=140.78 Aligned_cols=164 Identities=15% Similarity=0.117 Sum_probs=115.5
Q ss_pred cccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhccc-
Q 028258 3 KQDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQ- 81 (211)
Q Consensus 3 ~~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~- 81 (211)
+|...++|++|||||+|+||++++++|+ ++|++|++++|+.... ....++ ++.+|++|++++.++++.+..
T Consensus 22 ~m~~~~~k~vlVTGas~gIG~aia~~l~-----~~G~~V~~~~r~~~~~--~~~~~~-~~~~Dv~d~~~v~~~~~~~~~~ 93 (260)
T 3un1_A 22 SMMRNQQKVVVITGASQGIGAGLVRAYR-----DRNYRVVATSRSIKPS--ADPDIH-TVAGDISKPETADRIVREGIER 93 (260)
T ss_dssp HHHHTTCCEEEESSCSSHHHHHHHHHHH-----HTTCEEEEEESSCCCC--SSTTEE-EEESCTTSHHHHHHHHHHHHHH
T ss_pred hhhCcCCCEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEeCChhhc--ccCceE-EEEccCCCHHHHHHHHHHHHHH
Confidence 4555567999999999999999999999 6899999999987653 235788 999999999988887765421
Q ss_pred --ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCC
Q 028258 82 --EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQL 150 (211)
Q Consensus 82 --~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~ 150 (211)
.+|++||+|+... .++...+++|+.++.++++++...+. ..+..+++++||...+..
T Consensus 94 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~-~~~~g~iv~isS~~~~~~----------- 161 (260)
T 3un1_A 94 FGRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEML-KQGSGHIVSITTSLVDQP----------- 161 (260)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HTTCEEEEEECCTTTTSC-----------
T ss_pred CCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-HcCCcEEEEEechhhccC-----------
Confidence 2899999998642 14556788999999998887743210 013578888887543311
Q ss_pred CCCCCCCcCCCCCCCCCCcchhH-----HHHHhh-----cCCCceEEEecCCceEecC
Q 028258 151 MPYEVPFKEDSSRLPFPNFYYEL-----EDVSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 151 ~~~~~~~~e~~~~~~~~~~~~~~-----e~~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
.+ ..+...|.. +.+.+. ...|+++..++|+.+.++-
T Consensus 162 ----------~~--~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~ 207 (260)
T 3un1_A 162 ----------MV--GMPSALASLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPM 207 (260)
T ss_dssp ----------BT--TCCCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTT
T ss_pred ----------CC--CCccHHHHHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCC
Confidence 00 012222332 222211 3468999999999999874
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=3.8e-19 Score=144.82 Aligned_cols=140 Identities=17% Similarity=0.173 Sum_probs=100.5
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCC--CcEEEEEeCCCCCCC-CCCCCceeEEEeeCCCHHHHHHHHHhcccccceEE
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGS--PWKVYGAARRPPPGW-FPTALVDRYITFDALDPTDTALKLSLISQEITNLF 87 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~--g~~V~~~~R~~~~~~-~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~ 87 (211)
+|||||||||||++++++|+ ++ |++|++++|++.+.. ....+++ ++.+|++|++++.+++++ +|+||
T Consensus 1 ~ilVtGatG~iG~~l~~~L~-----~~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~D~~d~~~~~~~~~~----~d~vi 70 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLM-----KTVPASQIVAIVRNPAKAQALAAQGIT-VRQADYGDEAALTSALQG----VEKLL 70 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHT-----TTSCGGGEEEEESCTTTCHHHHHTTCE-EEECCTTCHHHHHHHTTT----CSEEE
T ss_pred CEEEEcCCchHHHHHHHHHH-----hhCCCceEEEEEcChHhhhhhhcCCCe-EEEcCCCCHHHHHHHHhC----CCEEE
Confidence 48999999999999999999 56 899999999876431 1125788 999999999999988876 68999
Q ss_pred eecccCCchhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCCCCCCCC
Q 028258 88 WVPLQVQESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFP 167 (211)
Q Consensus 88 ~~a~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~~~~~~~ 167 (211)
|+++... ..|+.++.++++++.+. ++++|+++||..+|. .+ .+..
T Consensus 71 ~~a~~~~-------~~~~~~~~~l~~a~~~~-----~~~~~v~~Ss~~~~~----------------------~~-~~y~ 115 (286)
T 2zcu_A 71 LISSSEV-------GQRAPQHRNVINAAKAA-----GVKFIAYTSLLHADT----------------------SP-LGLA 115 (286)
T ss_dssp ECC---------------CHHHHHHHHHHHH-----TCCEEEEEEETTTTT----------------------CC-STTH
T ss_pred EeCCCCc-------hHHHHHHHHHHHHHHHc-----CCCEEEEECCCCCCC----------------------Cc-chhH
Confidence 9997531 24778899999999887 678999998864431 01 0111
Q ss_pred CcchhHHHHHhhcCCCceEEEecCCceEec
Q 028258 168 NFYYELEDVSASYSPAITYSVHRSSVIIGA 197 (211)
Q Consensus 168 ~~~~~~e~~l~~~~~~~~~~i~Rp~~i~G~ 197 (211)
..+...|+++.+ .+++++++||+.++++
T Consensus 116 ~sK~~~e~~~~~--~~~~~~ilrp~~~~~~ 143 (286)
T 2zcu_A 116 DEHIETEKMLAD--SGIVYTLLRNGWYSEN 143 (286)
T ss_dssp HHHHHHHHHHHH--HCSEEEEEEECCBHHH
T ss_pred HHHHHHHHHHHH--cCCCeEEEeChHHhhh
Confidence 122334555543 6899999999887664
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=4.2e-18 Score=143.72 Aligned_cols=142 Identities=11% Similarity=-0.022 Sum_probs=104.6
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC---CC-CCCCceeEEEee-CCCHHHHHHHHHhccccc
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG---WF-PTALVDRYITFD-ALDPTDTALKLSLISQEI 83 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~---~~-~~~~~~~~i~~D-l~d~~~~~~~~~~~~~~~ 83 (211)
+++|||||||||||++|+++|+ ++|++|++++|++.+. .+ ..++++ ++.+| ++|++++.+++++ +
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~-----~~g~~V~~~~R~~~~~~~~~l~~~~~v~-~v~~D~l~d~~~l~~~~~~----~ 74 (352)
T 1xgk_A 5 KKTIAVVGATGRQGASLIRVAA-----AVGHHVRAQVHSLKGLIAEELQAIPNVT-LFQGPLLNNVPLMDTLFEG----A 74 (352)
T ss_dssp CCCEEEESTTSHHHHHHHHHHH-----HTTCCEEEEESCSCSHHHHHHHTSTTEE-EEESCCTTCHHHHHHHHTT----C
T ss_pred CCEEEEECCCCHHHHHHHHHHH-----hCCCEEEEEECCCChhhHHHHhhcCCcE-EEECCccCCHHHHHHHHhc----C
Confidence 5789999999999999999999 6899999999987642 01 124788 99999 9999999998876 6
Q ss_pred ceEEeecccCCchhHHHHhhcHHHHHHHHHHHHhcCCCCCC-ceEEEEeecCe--eeecccCCccccCCCCCCCCCCcCC
Q 028258 84 TNLFWVPLQVQESEEVNIFKNSTMLKNVLSVLVSSNSGRSR-LRHVALLTGTK--HYMGPIFDPSLAGQLMPYEVPFKED 160 (211)
Q Consensus 84 ~~v~~~a~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~~~~~~s~~~--~y~~~~~~~~~~g~~~~~~~~~~e~ 160 (211)
|+|||+++.... ..|..+ +++++++.+. + +++|+++||.. .|+ +
T Consensus 75 d~Vi~~a~~~~~------~~~~~~-~~l~~aa~~~-----g~v~~~V~~SS~~~~~~~--------------------~- 121 (352)
T 1xgk_A 75 HLAFINTTSQAG------DEIAIG-KDLADAAKRA-----GTIQHYIYSSMPDHSLYG--------------------P- 121 (352)
T ss_dssp SEEEECCCSTTS------CHHHHH-HHHHHHHHHH-----SCCSEEEEEECCCGGGTS--------------------S-
T ss_pred CEEEEcCCCCCc------HHHHHH-HHHHHHHHHc-----CCccEEEEeCCccccccC--------------------C-
Confidence 889988764321 336666 8999999887 5 78999998853 111 0
Q ss_pred CCCCCCCCcch----hHHHHHhhcCCCceEEEecCCceEecCCC
Q 028258 161 SSRLPFPNFYY----ELEDVSASYSPAITYSVHRSSVIIGASPR 200 (211)
Q Consensus 161 ~~~~~~~~~~~----~~e~~l~~~~~~~~~~i~Rp~~i~G~~~~ 200 (211)
..+..|+ ..|+++. ..+++++++||+ +||+...
T Consensus 122 ----~~~~~y~~sK~~~E~~~~--~~gi~~~ivrpg-~~g~~~~ 158 (352)
T 1xgk_A 122 ----WPAVPMWAPKFTVENYVR--QLGLPSTFVYAG-IYNNNFT 158 (352)
T ss_dssp ----CCCCTTTHHHHHHHHHHH--TSSSCEEEEEEC-EEGGGCB
T ss_pred ----CCCccHHHHHHHHHHHHH--HcCCCEEEEecc-eecCCch
Confidence 0112233 3344443 468999999987 6898753
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.77 E-value=3.6e-18 Score=135.91 Aligned_cols=155 Identities=14% Similarity=0.024 Sum_probs=111.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcc--cccce
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLIS--QEITN 85 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~--~~~~~ 85 (211)
|+|++|||||||+||++++++|+ ++|++|++++|++. . ..++ ++.+|++|++++.++++.++ ..+|.
T Consensus 1 ~~k~vlVtGasggiG~~la~~l~-----~~G~~V~~~~r~~~-~----~~~~-~~~~D~~~~~~~~~~~~~~~~~~~~d~ 69 (242)
T 1uay_A 1 MERSALVTGGASGLGRAAALALK-----ARGYRVVVLDLRRE-G----EDLI-YVEGDVTREEDVRRAVARAQEEAPLFA 69 (242)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHH-----HHTCEEEEEESSCC-S----SSSE-EEECCTTCHHHHHHHHHHHHHHSCEEE
T ss_pred CCCEEEEeCCCChHHHHHHHHHH-----HCCCEEEEEccCcc-c----cceE-EEeCCCCCHHHHHHHHHHHHhhCCceE
Confidence 45899999999999999999999 68999999999866 2 4567 99999999999888887541 02899
Q ss_pred EEeecccCCc-------------hhHHHHhhcHHHHHHHHHHHHhcCCCCC-----CceEEEEeecCeeeecccCCcccc
Q 028258 86 LFWVPLQVQE-------------SEEVNIFKNSTMLKNVLSVLVSSNSGRS-----RLRHVALLTGTKHYMGPIFDPSLA 147 (211)
Q Consensus 86 v~~~a~~~~~-------------~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~~~~~~~~s~~~~y~~~~~~~~~~ 147 (211)
+||+|+.... ++...+++|+.++.++++++...+.... ...+|+++||...|...
T Consensus 70 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~------- 142 (242)
T 1uay_A 70 VVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQ------- 142 (242)
T ss_dssp EEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCC-------
T ss_pred EEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCC-------
Confidence 9999976321 4566789999999999998876531111 12388998887655310
Q ss_pred CCCCCCCCCCcCCCCCCCCCCcchhHH-----HHHhh-----cCCCceEEEecCCceEecC
Q 028258 148 GQLMPYEVPFKEDSSRLPFPNFYYELE-----DVSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 148 g~~~~~~~~~~e~~~~~~~~~~~~~~e-----~~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
++...|... .+... ...+++++++||+.++++.
T Consensus 143 ------------------~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~ 185 (242)
T 1uay_A 143 ------------------IGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPL 185 (242)
T ss_dssp ------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHH
T ss_pred ------------------CCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchh
Confidence 011122222 22211 3458999999999999874
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.76 E-value=8.5e-19 Score=139.95 Aligned_cols=160 Identities=15% Similarity=0.015 Sum_probs=112.9
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC---CCCCCceeEEEeeCCCHHHHHHHHHhccccc
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW---FPTALVDRYITFDALDPTDTALKLSLISQEI 83 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~---~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~ 83 (211)
+.+|++|||||+|+||++++++|+ ++|++|++++|++.... ....+++ ++.+|++|++++.+.++.... +
T Consensus 5 ~~~~~vlVTGasggiG~~~a~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~-i 77 (244)
T 1cyd_A 5 FSGLRALVTGAGKGIGRDTVKALH-----ASGAKVVAVTRTNSDLVSLAKECPGIE-PVCVDLGDWDATEKALGGIGP-V 77 (244)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHSTTCE-EEECCTTCHHHHHHHHTTCCC-C
T ss_pred CCCCEEEEeCCCchHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHhccCCC-cEEecCCCHHHHHHHHHHcCC-C
Confidence 346899999999999999999999 68999999999764311 0124678 889999999999999886543 8
Q ss_pred ceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCC
Q 028258 84 TNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYE 154 (211)
Q Consensus 84 ~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~ 154 (211)
|+|||+|+... .++...+++|+.++.++++++...+.......+|+++||...|...
T Consensus 78 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-------------- 143 (244)
T 1cyd_A 78 DLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTF-------------- 143 (244)
T ss_dssp SEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC--------------
T ss_pred CEEEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCC--------------
Confidence 99999998532 1345678999999888888776531000114788999886544210
Q ss_pred CCCcCCCCCCCCCCcchhH-----HHHHhh-----cCCCceEEEecCCceEecC
Q 028258 155 VPFKEDSSRLPFPNFYYEL-----EDVSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 155 ~~~~e~~~~~~~~~~~~~~-----e~~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
++...|.. +.+.+. ...++++.++||+.++++.
T Consensus 144 -----------~~~~~Y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~ 186 (244)
T 1cyd_A 144 -----------PNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDM 186 (244)
T ss_dssp -----------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHH
T ss_pred -----------CCcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcc
Confidence 11112322 222222 2368999999999999874
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} | Back alignment and structure |
|---|
Probab=99.76 E-value=4.1e-18 Score=139.93 Aligned_cols=123 Identities=16% Similarity=0.047 Sum_probs=100.1
Q ss_pred ccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC----CCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW----FPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~----~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
|..+.+|++|||||+|+||++++++|+ ++|++|++++|+..+.. ....+++ ++.+|++|++++.++++.+
T Consensus 11 ~~~l~gk~vlVTGas~gIG~~~a~~L~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~v~~~~~~~ 84 (291)
T 3rd5_A 11 LPSFAQRTVVITGANSGLGAVTARELA-----RRGATVIMAVRDTRKGEAAARTMAGQVE-VRELDLQDLSSVRRFADGV 84 (291)
T ss_dssp CCCCTTCEEEEECCSSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHTTSSSEEE-EEECCTTCHHHHHHHHHTC
T ss_pred ccCCCCCEEEEeCCCChHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHhcCCee-EEEcCCCCHHHHHHHHHhc
Confidence 334457899999999999999999999 68999999999865311 1235788 9999999999999999887
Q ss_pred ccccceEEeecccCC-------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeee
Q 028258 80 SQEITNLFWVPLQVQ-------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYM 138 (211)
Q Consensus 80 ~~~~~~v~~~a~~~~-------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~ 138 (211)
.. +|++||+|+... .++...+++|+.++.++++++... -.++|+++||...|.
T Consensus 85 ~~-iD~lv~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~-----~~~riv~isS~~~~~ 144 (291)
T 3rd5_A 85 SG-ADVLINNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPR-----LTDRVVTVSSMAHWP 144 (291)
T ss_dssp CC-EEEEEECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGG-----EEEEEEEECCGGGTT
T ss_pred CC-CCEEEECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHH-----HHhheeEeechhhcc
Confidence 43 899999998632 245678899999999999999886 346899999876664
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.76 E-value=3.7e-18 Score=139.29 Aligned_cols=155 Identities=14% Similarity=0.015 Sum_probs=109.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC----CCCCCceeEEEeeCCCHHHHHHHHHhccc--
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW----FPTALVDRYITFDALDPTDTALKLSLISQ-- 81 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~----~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~-- 81 (211)
++|++|||||+|+||++++++|+ ++|++|++++|+..... .....++ ++.+|++|++++.++++.+..
T Consensus 4 ~~k~vlVTGas~gIG~~~a~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~~~~~~~~~~~~~ 77 (281)
T 3m1a_A 4 SAKVWLVTGASSGFGRAIAEAAV-----AAGDTVIGTARRTEALDDLVAAYPDRAE-AISLDVTDGERIDVVAADVLARY 77 (281)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHH-----HTTCEEEEEESSGGGGHHHHHHCTTTEE-EEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCChHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHhccCCce-EEEeeCCCHHHHHHHHHHHHHhC
Confidence 45899999999999999999999 68999999999865421 0135788 999999999988887765421
Q ss_pred -ccceEEeecccCC---------chhHHHHhhcHHH----HHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCcccc
Q 028258 82 -EITNLFWVPLQVQ---------ESEEVNIFKNSTM----LKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLA 147 (211)
Q Consensus 82 -~~~~v~~~a~~~~---------~~~~~~~~~n~~~----~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~ 147 (211)
.+|++||+|+... .++...+++|+.+ ++.+++.+++. +..+|+++||...+..
T Consensus 78 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~~~iv~~sS~~~~~~-------- 144 (281)
T 3m1a_A 78 GRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRER-----GSGSVVNISSFGGQLS-------- 144 (281)
T ss_dssp SCCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTCC--------
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----CCCEEEEEcCccccCC--------
Confidence 2899999998632 1455678999999 55555555554 4578899887543311
Q ss_pred CCCCCCCCCCcCCCCCCCCCCcchhHHH-----HHhh-----cCCCceEEEecCCceEecC
Q 028258 148 GQLMPYEVPFKEDSSRLPFPNFYYELED-----VSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 148 g~~~~~~~~~~e~~~~~~~~~~~~~~e~-----~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
.++...|...| +... ...++++.++||+.+.++-
T Consensus 145 -----------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 188 (281)
T 3m1a_A 145 -----------------FAGFSAYSATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNL 188 (281)
T ss_dssp -----------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTT
T ss_pred -----------------CCCchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccccc
Confidence 01122233222 2221 2368999999999998765
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A | Back alignment and structure |
|---|
Probab=99.75 E-value=5.9e-18 Score=136.88 Aligned_cols=161 Identities=14% Similarity=0.052 Sum_probs=104.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHhcc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSLIS 80 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~ 80 (211)
.+|++|||||+|+||++++++|+ ++|++|++++|++.... .....++ ++.+|++|++++.++++.+.
T Consensus 13 ~~k~vlITGasggiG~~la~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~ 86 (266)
T 1xq1_A 13 KAKTVLVTGGTKGIGHAIVEEFA-----GFGAVIHTCARNEYELNECLSKWQKKGFQVT-GSVCDASLRPEREKLMQTVS 86 (266)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHHHTTCCEE-EEECCTTSHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCeeE-EEECCCCCHHHHHHHHHHHH
Confidence 46899999999999999999999 68999999999754211 0124678 89999999998888776541
Q ss_pred ----cccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCcccc
Q 028258 81 ----QEITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLA 147 (211)
Q Consensus 81 ----~~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~ 147 (211)
..+|+|||+|+... .++...+++|+.++.++++++...+. ..+..+|+++||...+...
T Consensus 87 ~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~-~~~~~~iv~isS~~~~~~~------- 158 (266)
T 1xq1_A 87 SMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLK-ASGCGNIIFMSSIAGVVSA------- 158 (266)
T ss_dssp HHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHSSCEEEEEC---------------
T ss_pred HHhCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-hcCCcEEEEEccchhccCC-------
Confidence 12899999998632 13456789999999999888843210 0135788998886544210
Q ss_pred CCCCCCCCCCcCCCCCCCCCCcchh----HHHHHhh-----cCCCceEEEecCCceEecCC
Q 028258 148 GQLMPYEVPFKEDSSRLPFPNFYYE----LEDVSAS-----YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 148 g~~~~~~~~~~e~~~~~~~~~~~~~----~e~~l~~-----~~~~~~~~i~Rp~~i~G~~~ 199 (211)
+....|.. .+.+.+. ...+++++++||+.++++..
T Consensus 159 -----------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~ 202 (266)
T 1xq1_A 159 -----------------SVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLA 202 (266)
T ss_dssp -------------------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC----
T ss_pred -----------------CCCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchh
Confidence 01112222 1222221 24689999999999999854
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.75 E-value=3e-17 Score=131.98 Aligned_cols=158 Identities=12% Similarity=-0.011 Sum_probs=107.7
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhccc---cc
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQ---EI 83 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~---~~ 83 (211)
+++|++|||||+|+||++++++|+ ++|++|++++|++... ..++. ++.+|++|++++.++++.+.. .+
T Consensus 5 l~~k~vlVTGas~giG~~ia~~l~-----~~G~~V~~~~r~~~~~---~~~~~-~~~~D~~d~~~~~~~~~~~~~~~g~i 75 (250)
T 2fwm_X 5 FSGKNVWVTGAGKGIGYATALAFV-----EAGAKVTGFDQAFTQE---QYPFA-TEVMDVADAAQVAQVCQRLLAETERL 75 (250)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHH-----HTTCEEEEEESCCCSS---CCSSE-EEECCTTCHHHHHHHHHHHHHHCSCC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEeCchhhh---cCCce-EEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 346899999999999999999999 6899999999986532 12378 899999999988888765421 28
Q ss_pred ceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCC
Q 028258 84 TNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYE 154 (211)
Q Consensus 84 ~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~ 154 (211)
|++||+|+... .++...+++|+.++.++++++...+... +..+|+++||...+..
T Consensus 76 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~-~~g~iv~isS~~~~~~--------------- 139 (250)
T 2fwm_X 76 DALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQ-RGGAIVTVASDAAHTP--------------- 139 (250)
T ss_dssp CEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEECCGGGTSC---------------
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhc-CCCEEEEECchhhCCC---------------
Confidence 99999998632 1456678999999988888774321001 3468888887543310
Q ss_pred CCCcCCCCCCCCCCcchh----HHHHHhh-----cCCCceEEEecCCceEecC
Q 028258 155 VPFKEDSSRLPFPNFYYE----LEDVSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 155 ~~~~e~~~~~~~~~~~~~----~e~~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
. +....|.. .+.+.+. ...++++.++||+.+.++.
T Consensus 140 ------~---~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 183 (250)
T 2fwm_X 140 ------R---IGMSAYGASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDM 183 (250)
T ss_dssp ------C---TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----
T ss_pred ------C---CCCchHHHHHHHHHHHHHHHHHHhCccCCEEEEEECCcccCcc
Confidence 0 11112222 1222111 3468999999999999875
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} | Back alignment and structure |
|---|
Probab=99.75 E-value=1.3e-18 Score=139.19 Aligned_cols=117 Identities=17% Similarity=0.057 Sum_probs=91.7
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccceEEee
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITNLFWV 89 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~~~ 89 (211)
|+||||||||+||++++++|+ ++|++|++++|++.+.. . .+.+|++|++++.++++.+...+|+|||+
T Consensus 2 k~vlVtGasg~iG~~l~~~L~-----~~g~~V~~~~r~~~~~~------~-~~~~D~~~~~~~~~~~~~~~~~~d~vi~~ 69 (255)
T 2dkn_A 2 SVIAITGSASGIGAALKELLA-----RAGHTVIGIDRGQADIE------A-DLSTPGGRETAVAAVLDRCGGVLDGLVCC 69 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESSSSSEE------C-CTTSHHHHHHHHHHHHHHHTTCCSEEEEC
T ss_pred cEEEEeCCCcHHHHHHHHHHH-----hCCCEEEEEeCChhHcc------c-cccCCcccHHHHHHHHHHcCCCccEEEEC
Confidence 689999999999999999999 68999999999865421 1 24589999998888887551128999999
Q ss_pred cccCC--chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeec
Q 028258 90 PLQVQ--ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMG 139 (211)
Q Consensus 90 a~~~~--~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~ 139 (211)
|+... .++...+++|+.++.++++++...+. ..+..+|+++||...|+.
T Consensus 70 Ag~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~-~~~~~~iv~~sS~~~~~~ 120 (255)
T 2dkn_A 70 AGVGVTAANSGLVVAVNYFGVSALLDGLAEALS-RGQQPAAVIVGSIAATQP 120 (255)
T ss_dssp CCCCTTSSCHHHHHHHHTHHHHHHHHHHHHHHH-TSSSCEEEEECCGGGGST
T ss_pred CCCCCcchhHHHHHHHHhHHHHHHHHHHHHHhh-hcCCceEEEEeccccccc
Confidence 98754 46778889999999999998765421 113578999998877753
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} | Back alignment and structure |
|---|
Probab=99.75 E-value=7.4e-18 Score=135.67 Aligned_cols=162 Identities=11% Similarity=0.002 Sum_probs=111.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHhcc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSLIS 80 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~ 80 (211)
.+|++|||||+|+||++++++|+ ++|++|++++|++.... ....+++ ++.+|++|++++.++++.+.
T Consensus 12 ~~k~vlItGasggiG~~la~~l~-----~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~-~~~~D~~~~~~~~~~~~~~~ 85 (260)
T 3awd_A 12 DNRVAIVTGGAQNIGLACVTALA-----EAGARVIIADLDEAMATKAVEDLRMEGHDVS-SVVMDVTNTESVQNAVRSVH 85 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHHHTTCCEE-EEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCceE-EEEecCCCHHHHHHHHHHHH
Confidence 46899999999999999999999 68999999999754210 0134688 99999999998888876542
Q ss_pred c---ccceEEeecccCC----------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCcccc
Q 028258 81 Q---EITNLFWVPLQVQ----------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLA 147 (211)
Q Consensus 81 ~---~~~~v~~~a~~~~----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~ 147 (211)
. .+|+|||+|+... ..+...+++|+.++.++++++...+. ..+..+|+++||...+..
T Consensus 86 ~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~~~iv~~sS~~~~~~-------- 156 (260)
T 3awd_A 86 EQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIML-EQKQGVIVAIGSMSGLIV-------- 156 (260)
T ss_dssp HHHSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHTCEEEEEECCGGGTSC--------
T ss_pred HHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHh-hcCCCEEEEEecchhccc--------
Confidence 1 2899999998533 12456789999999888887764210 013468888877533210
Q ss_pred CCCCCCCCCCcCCCCCCCCCCcchhHHH-----HHhh-----cCCCceEEEecCCceEecCC
Q 028258 148 GQLMPYEVPFKEDSSRLPFPNFYYELED-----VSAS-----YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 148 g~~~~~~~~~~e~~~~~~~~~~~~~~e~-----~l~~-----~~~~~~~~i~Rp~~i~G~~~ 199 (211)
.+ ..+...|...| +... ...+++++++||+.++++..
T Consensus 157 -------------~~--~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~ 203 (260)
T 3awd_A 157 -------------NR--PQQQAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLT 203 (260)
T ss_dssp -------------CS--SSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTT
T ss_pred -------------CC--CCCccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchh
Confidence 00 01112233222 2221 23689999999999999753
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=1e-17 Score=134.41 Aligned_cols=160 Identities=8% Similarity=-0.079 Sum_probs=111.5
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
+.+|++|||||+|+||++++++|+ ++|++|++++|++.... ....++. ++.+|++|++++.++++.+
T Consensus 9 ~~~~~vlVtGasggiG~~la~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~ 82 (255)
T 1fmc_A 9 LDGKCAIITGAGAGIGKEIAITFA-----TAGASVVVSDINADAANHVVDEIQQLGGQAF-ACRCDITSEQELSALADFA 82 (255)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHH-----TTTCEEEEEESCHHHHHHHHHHHHHTTCCEE-EEECCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEECCccHHHHHHHHHHH-----HCCCEEEEEcCCHHHHHHHHHHHHHhCCceE-EEEcCCCCHHHHHHHHHHH
Confidence 346899999999999999999999 68999999999764310 0134678 8999999999888887643
Q ss_pred cc---ccceEEeecccCCc--------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccC
Q 028258 80 SQ---EITNLFWVPLQVQE--------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAG 148 (211)
Q Consensus 80 ~~---~~~~v~~~a~~~~~--------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g 148 (211)
.. .+|+|||+|+.... ++...+++|+.++.++++++...+. ..+..+|+++||...|..
T Consensus 83 ~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~-~~~~~~iv~~sS~~~~~~--------- 152 (255)
T 1fmc_A 83 ISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEME-KNGGGVILTITSMAAENK--------- 152 (255)
T ss_dssp HHHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHTCEEEEEECCGGGTCC---------
T ss_pred HHhcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-hcCCcEEEEEcchhhcCC---------
Confidence 11 28999999986431 3456778999998888887753210 013578888887654321
Q ss_pred CCCCCCCCCcCCCCCCCCCCcchhH-----HHHHhh-----cCCCceEEEecCCceEecC
Q 028258 149 QLMPYEVPFKEDSSRLPFPNFYYEL-----EDVSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 149 ~~~~~~~~~~e~~~~~~~~~~~~~~-----e~~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
.++...|.. +.+... ...++++.++||+.++++.
T Consensus 153 ----------------~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~ 196 (255)
T 1fmc_A 153 ----------------NINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDA 196 (255)
T ss_dssp ----------------CTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHH
T ss_pred ----------------CCCCcccHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchh
Confidence 011222332 222221 3468999999999999874
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.75 E-value=1.6e-17 Score=133.17 Aligned_cols=162 Identities=10% Similarity=0.019 Sum_probs=112.9
Q ss_pred cCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC--CCCCCceeEEEeeCCCHHHHHHHHHhcccc
Q 028258 5 DQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW--FPTALVDRYITFDALDPTDTALKLSLISQE 82 (211)
Q Consensus 5 ~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~--~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~ 82 (211)
..+++|++|||||+|+||++++++|+ ++|++|++++|++.+.. ....+++ ++.+|++|++++.+.++....
T Consensus 2 ~~l~~k~vlVTGas~gIG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~- 74 (246)
T 2ag5_A 2 GRLDGKVIILTAAAQGIGQAAALAFA-----REGAKVIATDINESKLQELEKYPGIQ-TRVLDVTKKKQIDQFANEVER- 74 (246)
T ss_dssp CTTTTCEEEESSTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHGGGGGSTTEE-EEECCTTCHHHHHHHHHHCSC-
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHhccCce-EEEeeCCCHHHHHHHHHHhCC-
Confidence 33457899999999999999999999 68999999999754311 1113678 899999999998877776654
Q ss_pred cceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCC
Q 028258 83 ITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPY 153 (211)
Q Consensus 83 ~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~ 153 (211)
+|++||+|+... .++...+++|+.++.++++++...+... +..+|+++||...+..
T Consensus 75 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~-------------- 139 (246)
T 2ag5_A 75 LDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQ-KSGNIINMSSVASSVK-------------- 139 (246)
T ss_dssp CSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCSBTTTB--------------
T ss_pred CCEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCceEEEEechHhCcC--------------
Confidence 899999998643 1355677899999988888775421001 3478888887543311
Q ss_pred CCCCcCCCCCCCCCCcchhH-----HHHHhh-----cCCCceEEEecCCceEecC
Q 028258 154 EVPFKEDSSRLPFPNFYYEL-----EDVSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 154 ~~~~~e~~~~~~~~~~~~~~-----e~~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
. +.+...|.. +.+.+. ...++++.++||+.++++.
T Consensus 140 -~---------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 184 (246)
T 2ag5_A 140 -G---------VVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPS 184 (246)
T ss_dssp -C---------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHH
T ss_pred -C---------CCCCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcc
Confidence 0 001122322 222221 3468999999999999873
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.75 E-value=3.2e-18 Score=141.12 Aligned_cols=148 Identities=14% Similarity=0.092 Sum_probs=104.6
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC---------CCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW---------FPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~---------~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
+++||||||||+||++++++|+ +.|++|++++|++.... +...+++ ++.+|++|++++.+++++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~-----~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~d~~~l~~~~~~- 76 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASI-----SLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAK-LIEASLDDHQRLVDALKQ- 76 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHH-----HTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCE-EECCCSSCHHHHHHHHTT-
T ss_pred CCEEEEEcCCcHHHHHHHHHHH-----hCCCcEEEEECCCcccchhHHHHHHHHHhCCeE-EEeCCCCCHHHHHHHHhC-
Confidence 3679999999999999999999 68999999999864210 0135788 999999999999999886
Q ss_pred ccccceEEeecccCCchhHHHHhhcHHHHHHHHHHHHhcCCCCCC-ceEEEEeecCeeeecccCCccccCCCCCCCCCCc
Q 028258 80 SQEITNLFWVPLQVQESEEVNIFKNSTMLKNVLSVLVSSNSGRSR-LRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFK 158 (211)
Q Consensus 80 ~~~~~~v~~~a~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~ 158 (211)
+|.|||+++..... .|+.++.++++++++. + +++|++ | .|+... ..+
T Consensus 77 ---~d~vi~~a~~~~~~------~~~~~~~~l~~aa~~~-----g~v~~~v~-S---~~g~~~------------~~~-- 124 (313)
T 1qyd_A 77 ---VDVVISALAGGVLS------HHILEQLKLVEAIKEA-----GNIKRFLP-S---EFGMDP------------DIM-- 124 (313)
T ss_dssp ---CSEEEECCCCSSSS------TTTTTHHHHHHHHHHS-----CCCSEEEC-S---CCSSCT------------TSC--
T ss_pred ---CCEEEECCccccch------hhHHHHHHHHHHHHhc-----CCCceEEe-c---CCcCCc------------ccc--
Confidence 68999999865421 2666778999999886 4 788875 2 344210 011
Q ss_pred CCCCCCCCCCcchh----HHHHHhhcCCCceEEEecCCceEecCC
Q 028258 159 EDSSRLPFPNFYYE----LEDVSASYSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 159 e~~~~~~~~~~~~~----~e~~l~~~~~~~~~~i~Rp~~i~G~~~ 199 (211)
+.+..+ ...+|. .|+++ +..+++|+++||+.++|...
T Consensus 125 -~~~~~p-~~~~y~sK~~~e~~~--~~~g~~~~ilrp~~~~~~~~ 165 (313)
T 1qyd_A 125 -EHALQP-GSITFIDKRKVRRAI--EAASIPYTYVSSNMFAGYFA 165 (313)
T ss_dssp -CCCCSS-TTHHHHHHHHHHHHH--HHTTCCBCEEECCEEHHHHT
T ss_pred -ccCCCC-CcchHHHHHHHHHHH--HhcCCCeEEEEeceeccccc
Confidence 122111 122342 23333 34789999999999988543
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.74 E-value=8.5e-18 Score=136.00 Aligned_cols=123 Identities=11% Similarity=-0.108 Sum_probs=90.5
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC----CCCCCceeEEEeeCCCHHHHHHHHHhccc-
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW----FPTALVDRYITFDALDPTDTALKLSLISQ- 81 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~----~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~- 81 (211)
+.+|++|||||+|+||++++++|+ ++|++|++++|++.... ....++. ++.+|++|++++.++++.+..
T Consensus 10 l~~k~vlVTGas~gIG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~D~~d~~~v~~~~~~~~~~ 83 (263)
T 3ak4_A 10 LSGRKAIVTGGSKGIGAAIARALD-----KAGATVAIADLDVMAAQAVVAGLENGGF-AVEVDVTKRASVDAAMQKAIDA 83 (263)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHTCTTCCE-EEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCChHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHhcCCe-EEEEeCCCHHHHHHHHHHHHHH
Confidence 446899999999999999999999 68999999999754310 0123678 899999999988887765421
Q ss_pred --ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 82 --EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 82 --~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
.+|++||+|+... .++...+++|+.++.++++++...+.......+|+++||..
T Consensus 84 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~ 148 (263)
T 3ak4_A 84 LGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLA 148 (263)
T ss_dssp HTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGG
T ss_pred cCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccc
Confidence 2899999998632 14556789999998888887765421011146788887754
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=5.5e-18 Score=135.97 Aligned_cols=162 Identities=10% Similarity=-0.033 Sum_probs=108.5
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCC----CCCCc-eeEEEeeCCCHHHHHHHHHhcc-
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF----PTALV-DRYITFDALDPTDTALKLSLIS- 80 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~----~~~~~-~~~i~~Dl~d~~~~~~~~~~~~- 80 (211)
+.+|++|||||||+||++++++|+ ++|++|++++|++.+... ....+ + ++.+|++|++++.++++.+.
T Consensus 9 ~~~k~vlITGasggiG~~la~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~ 82 (254)
T 2wsb_A 9 LDGACAAVTGAGSGIGLEICRAFA-----ASGARLILIDREAAALDRAAQELGAAVAA-RIVADVTDAEAMTAAAAEAEA 82 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHGGGEEE-EEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHhccccee-EEEEecCCHHHHHHHHHHHHh
Confidence 346899999999999999999999 689999999997643110 01345 7 89999999998888776531
Q ss_pred -cccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCC
Q 028258 81 -QEITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQL 150 (211)
Q Consensus 81 -~~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~ 150 (211)
..+|+|||+|+.... .+...+++|+.++.++++++...+. ..+..+|+++||...+...
T Consensus 83 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~-~~~~~~iv~isS~~~~~~~---------- 151 (254)
T 2wsb_A 83 VAPVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMV-ARGAGAIVNLGSMSGTIVN---------- 151 (254)
T ss_dssp HSCCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHTCEEEEEECCGGGTSCC----------
T ss_pred hCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-hcCCcEEEEEecchhccCC----------
Confidence 128999999986321 3456678999997776665543210 0135788998886543210
Q ss_pred CCCCCCCcCCCCCCCCCCcchhH-----HHHHhh-----cCCCceEEEecCCceEecC
Q 028258 151 MPYEVPFKEDSSRLPFPNFYYEL-----EDVSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 151 ~~~~~~~~e~~~~~~~~~~~~~~-----e~~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
+ ..+...|.. +.+... ...+++++++||+.++++.
T Consensus 152 -----------~--~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~ 196 (254)
T 2wsb_A 152 -----------R--PQFASSYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEM 196 (254)
T ss_dssp -----------S--SSCBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHH
T ss_pred -----------C--CCcchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchh
Confidence 0 011122322 222221 2358999999999999863
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=7.7e-18 Score=138.60 Aligned_cols=161 Identities=14% Similarity=-0.077 Sum_probs=111.2
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----C--C-CCCceeEEEeeCCCHHHHHHHHHh
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----F--P-TALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----~--~-~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
+++|++|||||+|+||++++++|+ ++|++|++++|++.... . . ..++. ++.+|++|++++.++++.
T Consensus 24 l~~k~vlITGasggiG~~la~~L~-----~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~-~~~~Dl~~~~~~~~~~~~ 97 (302)
T 1w6u_A 24 FQGKVAFITGGGTGLGKGMTTLLS-----SLGAQCVIASRKMDVLKATAEQISSQTGNKVH-AIQCDVRDPDMVQNTVSE 97 (302)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHHHHHSSCEE-EEECCTTCHHHHHHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHHhcCCceE-EEEeCCCCHHHHHHHHHH
Confidence 456899999999999999999999 68999999999764311 0 0 35678 999999999988888776
Q ss_pred ccc---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccc
Q 028258 79 ISQ---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSL 146 (211)
Q Consensus 79 ~~~---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~ 146 (211)
+.. .+|+|||+|+... .++...+++|+.++.++++++...+....+..+|+++||...+...
T Consensus 98 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~------ 171 (302)
T 1w6u_A 98 LIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGS------ 171 (302)
T ss_dssp HHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCC------
T ss_pred HHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCC------
Confidence 521 2799999998532 1355678999999988888776431001134688888886443210
Q ss_pred cCCCCCCCCCCcCCCCCCCCCCcchhH-----HHHHhh-----cCCCceEEEecCCceEecC
Q 028258 147 AGQLMPYEVPFKEDSSRLPFPNFYYEL-----EDVSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 147 ~g~~~~~~~~~~e~~~~~~~~~~~~~~-----e~~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
++...|.. +.+... ...+++++++||+.++++.
T Consensus 172 -------------------~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~ 214 (302)
T 1w6u_A 172 -------------------GFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKG 214 (302)
T ss_dssp -------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC--
T ss_pred -------------------CCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcc
Confidence 11112322 222221 2378999999999999873
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.74 E-value=5.3e-18 Score=138.17 Aligned_cols=163 Identities=13% Similarity=0.060 Sum_probs=110.5
Q ss_pred ccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC----------CCCCCCceeEEEeeCCCHHHHH
Q 028258 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG----------WFPTALVDRYITFDALDPTDTA 73 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~----------~~~~~~~~~~i~~Dl~d~~~~~ 73 (211)
|..+++|++|||||+|+||++++++|+ ++|++|++++|++.+. .....++. ++.+|++|++++.
T Consensus 1 m~~~~~k~vlVTGas~gIG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~ 74 (278)
T 1spx_A 1 MTRFAEKVAIITGSSNGIGRATAVLFA-----REGAKVTITGRHAERLEETRQQILAAGVSEQNVN-SVVADVTTDAGQD 74 (278)
T ss_dssp -CTTTTCEEEETTTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEE-EEECCTTSHHHHH
T ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcccCCCcee-EEecccCCHHHHH
Confidence 444567899999999999999999999 6899999999975421 11124578 8999999999888
Q ss_pred HHHHhccc---ccceEEeecccCC-------------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCee-
Q 028258 74 LKLSLISQ---EITNLFWVPLQVQ-------------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKH- 136 (211)
Q Consensus 74 ~~~~~~~~---~~~~v~~~a~~~~-------------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~- 136 (211)
++++.+.. .+|++||+|+... .++...+++|+.++.++++++...+... + .+|+++||...
T Consensus 75 ~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~-g~iv~isS~~~~ 152 (278)
T 1spx_A 75 EILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSST-K-GEIVNISSIASG 152 (278)
T ss_dssp HHHHHHHHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-T-CEEEEECCTTSS
T ss_pred HHHHHHHHHcCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc-C-CeEEEEeccccc
Confidence 87764421 2899999997632 1345567999999999888876542101 2 68888887543
Q ss_pred eecccCCccccCCCCCCCCCCcCCCCCCCCCCcchh----HHHHHhh-----cCCCceEEEecCCceEecC
Q 028258 137 YMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYE----LEDVSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 137 y~~~~~~~~~~g~~~~~~~~~~e~~~~~~~~~~~~~----~e~~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
+.. . +....|.. .+.+.+. ...+++++++||+.+.++.
T Consensus 153 ~~~---------------------~---~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 199 (278)
T 1spx_A 153 LHA---------------------T---PDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGF 199 (278)
T ss_dssp SSC---------------------C---TTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC
T ss_pred ccC---------------------C---CCccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCcc
Confidence 311 0 01112222 1222211 3468999999999998874
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A | Back alignment and structure |
|---|
Probab=99.74 E-value=4.5e-17 Score=132.13 Aligned_cols=121 Identities=16% Similarity=0.049 Sum_probs=93.9
Q ss_pred CCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhccc---c
Q 028258 6 QNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQ---E 82 (211)
Q Consensus 6 ~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~---~ 82 (211)
.+++|++|||||||+||++++++|+ ++|++|++++|++.. ..++. ++.+|++|++++.++++.+.. .
T Consensus 5 ~l~~k~vlVTGas~gIG~~ia~~l~-----~~G~~V~~~~r~~~~----~~~~~-~~~~Dl~~~~~v~~~~~~~~~~~g~ 74 (264)
T 2dtx_A 5 DLRDKVVIVTGASMGIGRAIAERFV-----DEGSKVIDLSIHDPG----EAKYD-HIECDVTNPDQVKASIDHIFKEYGS 74 (264)
T ss_dssp GGTTCEEEEESCSSHHHHHHHHHHH-----HTTCEEEEEESSCCC----SCSSE-EEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEecCccc----CCceE-EEEecCCCHHHHHHHHHHHHHHcCC
Confidence 3456899999999999999999999 689999999998664 35678 999999999988887765421 2
Q ss_pred cceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeee
Q 028258 83 ITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 137 (211)
Q Consensus 83 ~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y 137 (211)
+|.+||+|+... .++...+++|+.++.++++++...+... +..+|+++||...+
T Consensus 75 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~g~iv~isS~~~~ 137 (264)
T 2dtx_A 75 ISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRS-RDPSIVNISSVQAS 137 (264)
T ss_dssp CCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTS-SSCEEEEECCGGGT
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCcEEEEECCchhc
Confidence 899999998632 1456678999999888888876543111 34688888885443
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=2.9e-17 Score=133.43 Aligned_cols=162 Identities=12% Similarity=0.012 Sum_probs=113.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC------CCCCCceeEEEeeCCCHHHHHHHHHhccc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW------FPTALVDRYITFDALDPTDTALKLSLISQ 81 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~ 81 (211)
++|++|||||+|+||++++++|+ ++|++|++++|+..... ....+++ ++.+|++|++++.++++.+..
T Consensus 15 ~~k~vlITGasggiG~~~a~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~ 88 (278)
T 2bgk_A 15 QDKVAIITGGAGGIGETTAKLFV-----RYGAKVVIADIADDHGQKVCNNIGSPDVIS-FVHCDVTKDEDVRNLVDTTIA 88 (278)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHCCTTTEE-EEECCTTCHHHHHHHHHHHHH
T ss_pred cCCEEEEECCCCHHHHHHHHHHH-----HCCCEEEEEcCChhHHHHHHHHhCCCCceE-EEECCCCCHHHHHHHHHHHHH
Confidence 46899999999999999999999 68999999998754210 0113688 999999999988888765421
Q ss_pred ---ccceEEeecccCC-----------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCcccc
Q 028258 82 ---EITNLFWVPLQVQ-----------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLA 147 (211)
Q Consensus 82 ---~~~~v~~~a~~~~-----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~ 147 (211)
.+|+|||+|+... ..+...+++|+.++.++++++...+.. .+..+|+++||...|...
T Consensus 89 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~~iv~isS~~~~~~~------- 160 (278)
T 2bgk_A 89 KHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIP-AKKGSIVFTASISSFTAG------- 160 (278)
T ss_dssp HHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGG-GTCEEEEEECCGGGTCCC-------
T ss_pred HcCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhh-cCCCeEEEEeeccccCCC-------
Confidence 2899999998532 134567899999999998887754210 135788999886655310
Q ss_pred CCCCCCCCCCcCCCCCCCCCCcchhH-----HHHHhh-----cCCCceEEEecCCceEecCCC
Q 028258 148 GQLMPYEVPFKEDSSRLPFPNFYYEL-----EDVSAS-----YSPAITYSVHRSSVIIGASPR 200 (211)
Q Consensus 148 g~~~~~~~~~~e~~~~~~~~~~~~~~-----e~~l~~-----~~~~~~~~i~Rp~~i~G~~~~ 200 (211)
+.+...|.. +.+... ...+++++++||+.++++...
T Consensus 161 -----------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~ 206 (278)
T 2bgk_A 161 -----------------EGVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLT 206 (278)
T ss_dssp -----------------TTSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCT
T ss_pred -----------------CCCCcchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhh
Confidence 001112322 222222 246899999999999998643
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=9e-18 Score=135.84 Aligned_cols=160 Identities=14% Similarity=0.015 Sum_probs=110.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----C--C-CCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----F--P-TALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----~--~-~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
++|++|||||+|+||++++++|+ ++|++|++++|++.+.. . . ..++. ++.+|++|++++.++++.+
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~-~~~~D~~~~~~~~~~~~~~ 79 (263)
T 3ai3_A 6 SGKVAVITGSSSGIGLAIAEGFA-----KEGAHIVLVARQVDRLHEAARSLKEKFGVRVL-EVAVDVATPEGVDAVVESV 79 (263)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHHHHHCCCEE-EEECCTTSHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHH-----HCCCEEEEEcCCHHHHHHHHHHHHHhcCCceE-EEEcCCCCHHHHHHHHHHH
Confidence 46899999999999999999999 68999999999764311 0 0 24678 8999999999888877654
Q ss_pred cc---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCcccc
Q 028258 80 SQ---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLA 147 (211)
Q Consensus 80 ~~---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~ 147 (211)
.. .+|++||+|+... .++...+++|+.++.++++++...+. ..+..+|+++||...|...
T Consensus 80 ~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~g~iv~isS~~~~~~~------- 151 (263)
T 3ai3_A 80 RSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMR-ARGGGAIIHNASICAVQPL------- 151 (263)
T ss_dssp HHHHSSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHTCEEEEEECCGGGTSCC-------
T ss_pred HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-HcCCcEEEEECchhhcCCC-------
Confidence 21 2899999998632 14556789999998888887754210 0135788998886544210
Q ss_pred CCCCCCCCCCcCCCCCCCCCCcchh----HHHHHhh-----cCCCceEEEecCCceEecC
Q 028258 148 GQLMPYEVPFKEDSSRLPFPNFYYE----LEDVSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 148 g~~~~~~~~~~e~~~~~~~~~~~~~----~e~~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
+....|.. .+.+.+. ...++++.++||+.++++.
T Consensus 152 -----------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 194 (263)
T 3ai3_A 152 -----------------WYEPIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPD 194 (263)
T ss_dssp -----------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHH
T ss_pred -----------------CCcchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcc
Confidence 01112222 1211111 3468999999999999873
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.74 E-value=2.4e-17 Score=131.88 Aligned_cols=161 Identities=12% Similarity=0.016 Sum_probs=109.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC--------CCCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG--------WFPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~--------~~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
|+|++|||||||+||++++++|+ ++|++|++++|++... .....+++ ++.+|++|++++.++++.+
T Consensus 1 ~~k~vlItGasggiG~~~a~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~ 74 (250)
T 2cfc_A 1 MSRVAIVTGASSGNGLAIATRFL-----ARGDRVAALDLSAETLEETARTHWHAYADKVL-RVRADVADEGDVNAAIAAT 74 (250)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHSTTTGGGEE-EEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEE-EEEecCCCHHHHHHHHHHH
Confidence 45899999999999999999999 6899999999975421 11134678 8999999999888887654
Q ss_pred cc---ccceEEeecccCCc------------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCc
Q 028258 80 SQ---EITNLFWVPLQVQE------------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDP 144 (211)
Q Consensus 80 ~~---~~~~v~~~a~~~~~------------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~ 144 (211)
.. .+|+|||+|+.... ++...+++|+.++.++++++...+. ..+..+|+++||...+..
T Consensus 75 ~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~~~iv~isS~~~~~~----- 148 (250)
T 2cfc_A 75 MEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHML-LQGAGVIVNIASVASLVA----- 148 (250)
T ss_dssp HHHHSCCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHTCEEEEEECCGGGTSC-----
T ss_pred HHHhCCCCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-hCCCCEEEEECChhhccC-----
Confidence 21 28999999975321 3455678999888766665543210 013578888887544321
Q ss_pred cccCCCCCCCCCCcCCCCCCCCCCcchh----HHHHHhh-----cCCCceEEEecCCceEecCC
Q 028258 145 SLAGQLMPYEVPFKEDSSRLPFPNFYYE----LEDVSAS-----YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 145 ~~~g~~~~~~~~~~e~~~~~~~~~~~~~----~e~~l~~-----~~~~~~~~i~Rp~~i~G~~~ 199 (211)
. +....|.. .+.+... ...+++++++||+.++++..
T Consensus 149 ----------------~---~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~ 193 (250)
T 2cfc_A 149 ----------------F---PGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMT 193 (250)
T ss_dssp ----------------C---TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTT
T ss_pred ----------------C---CCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCcc
Confidence 0 01112222 2222221 34589999999999999753
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A | Back alignment and structure |
|---|
Probab=99.74 E-value=5.1e-18 Score=137.16 Aligned_cols=162 Identities=15% Similarity=0.005 Sum_probs=111.9
Q ss_pred CCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC----CCCCCceeEEEeeCCCHHHHHHHHHhccc
Q 028258 6 QNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW----FPTALVDRYITFDALDPTDTALKLSLISQ 81 (211)
Q Consensus 6 ~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~----~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~ 81 (211)
...+|++|||||+|+||++++++|+ ++|++|++++|+..... .....+. ++.+|++|++++.++++.+..
T Consensus 5 ~l~~k~vlVTGas~gIG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~D~~~~~~v~~~~~~~~~ 78 (259)
T 4e6p_A 5 RLEGKSALITGSARGIGRAFAEAYV-----REGATVAIADIDIERARQAAAEIGPAAY-AVQMDVTRQDSIDAAIAATVE 78 (259)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHCTTEE-EEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHhCCCce-EEEeeCCCHHHHHHHHHHHHH
Confidence 3456899999999999999999999 68999999999765311 0134678 999999999988877765421
Q ss_pred ---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCC
Q 028258 82 ---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQ 149 (211)
Q Consensus 82 ---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~ 149 (211)
.+|++||+|+... .++...+++|+.++.++++++...+.....-.+|+++||...+..
T Consensus 79 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~---------- 148 (259)
T 4e6p_A 79 HAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRG---------- 148 (259)
T ss_dssp HSSSCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC----------
T ss_pred HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccC----------
Confidence 2899999998632 245567789999999988887654200111357888887544321
Q ss_pred CCCCCCCCcCCCCCCCCCCcchhHHH-----HHhh-----cCCCceEEEecCCceEecC
Q 028258 150 LMPYEVPFKEDSSRLPFPNFYYELED-----VSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 150 ~~~~~~~~~e~~~~~~~~~~~~~~e~-----~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
.+....|...| +.+. ...++++..++|+.++++.
T Consensus 149 ---------------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~ 192 (259)
T 4e6p_A 149 ---------------EALVAIYCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEH 192 (259)
T ss_dssp ---------------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTT
T ss_pred ---------------CCCChHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccch
Confidence 01112232222 2111 3468999999999999874
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=1.3e-17 Score=134.94 Aligned_cols=161 Identities=13% Similarity=0.020 Sum_probs=109.2
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC----CCCCCceeEEEeeCCCHHHHHHHHHhccc-
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW----FPTALVDRYITFDALDPTDTALKLSLISQ- 81 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~----~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~- 81 (211)
+++|++|||||||+||++++++|+ ++|++|++++|++.+.. .....+. ++.+|++|++++.++++.+..
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~D~~~~~~v~~~~~~~~~~ 78 (260)
T 1nff_A 5 LTGKVALVSGGARGMGASHVRAMV-----AEGAKVVFGDILDEEGKAMAAELADAAR-YVHLDVTQPAQWKAAVDTAVTA 78 (260)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHTGGGEE-EEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHhhcCce-EEEecCCCHHHHHHHHHHHHHH
Confidence 346899999999999999999999 68999999999764311 0123477 899999999988887764421
Q ss_pred --ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCC
Q 028258 82 --EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQL 150 (211)
Q Consensus 82 --~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~ 150 (211)
.+|++||+|+... .++...+++|+.++.++++++...+... +..+|+++||...|..
T Consensus 79 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~----------- 146 (260)
T 1nff_A 79 FGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEA-GRGSIINISSIEGLAG----------- 146 (260)
T ss_dssp HSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTSC-----------
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCEEEEEeehhhcCC-----------
Confidence 2899999998632 1455678999999866655544321001 3578898888654321
Q ss_pred CCCCCCCcCCCCCCCCCCcchh----HHHHHhh-----cCCCceEEEecCCceEecC
Q 028258 151 MPYEVPFKEDSSRLPFPNFYYE----LEDVSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 151 ~~~~~~~~e~~~~~~~~~~~~~----~e~~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
. +....|.. .+.+.+. ...+++++++||+.++++.
T Consensus 147 ----------~---~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 190 (260)
T 1nff_A 147 ----------T---VACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPM 190 (260)
T ss_dssp ----------C---TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGG
T ss_pred ----------C---CCchhHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCc
Confidence 0 01112222 1222211 3468999999999999875
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.73 E-value=3e-18 Score=141.06 Aligned_cols=143 Identities=13% Similarity=0.107 Sum_probs=101.2
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC--C--------CCCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG--W--------FPTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~--~--------~~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
+++||||||||+||++++++|+ ++|++|++++|++... . +...+++ ++.+|++|++++.+++++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~-----~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~-~v~~D~~d~~~l~~~~~~ 77 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASL-----DLGHPTFLLVRESTASSNSEKAQLLESFKASGAN-IVHGSIDDHASLVEAVKN 77 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHH-----HTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCE-EECCCTTCHHHHHHHHHT
T ss_pred CCEEEEEcCCcHHHHHHHHHHH-----hCCCCEEEEECCcccccCHHHHHHHHHHHhCCCE-EEEeccCCHHHHHHHHcC
Confidence 3679999999999999999999 6889999999986432 0 0135789 999999999999999986
Q ss_pred cccccceEEeecccCCchhHHHHhhcHHHHHHHHHHHHhcCCCCCC-ceEEEEeecCeeeecccCCccccCCCCCCCCCC
Q 028258 79 ISQEITNLFWVPLQVQESEEVNIFKNSTMLKNVLSVLVSSNSGRSR-LRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPF 157 (211)
Q Consensus 79 ~~~~~~~v~~~a~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~ 157 (211)
+|.|||+++... +.++.++++++++. + +++|++ | .|+.. .
T Consensus 78 ----~d~vi~~a~~~~----------~~~~~~l~~aa~~~-----g~v~~~v~-S---~~g~~----------------~ 118 (308)
T 1qyc_A 78 ----VDVVISTVGSLQ----------IESQVNIIKAIKEV-----GTVKRFFP-S---EFGND----------------V 118 (308)
T ss_dssp ----CSEEEECCCGGG----------SGGGHHHHHHHHHH-----CCCSEEEC-S---CCSSC----------------T
T ss_pred ----CCEEEECCcchh----------hhhHHHHHHHHHhc-----CCCceEee-c---ccccC----------------c
Confidence 688999997542 23457899999887 4 788874 2 24321 1
Q ss_pred cCCCCCCCCC-CcchhHHHHHhh---cCCCceEEEecCCceEecCC
Q 028258 158 KEDSSRLPFP-NFYYELEDVSAS---YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 158 ~e~~~~~~~~-~~~~~~e~~l~~---~~~~~~~~i~Rp~~i~G~~~ 199 (211)
+|..+. .| ..+| ..|...+ +..+++|+++||+.++|...
T Consensus 119 ~~~~~~--~p~~~~y-~sK~~~e~~~~~~~~~~~~~r~~~~~~~~~ 161 (308)
T 1qyc_A 119 DNVHAV--EPAKSVF-EVKAKVRRAIEAEGIPYTYVSSNCFAGYFL 161 (308)
T ss_dssp TSCCCC--TTHHHHH-HHHHHHHHHHHHHTCCBEEEECCEEHHHHT
T ss_pred cccccC--CcchhHH-HHHHHHHHHHHhcCCCeEEEEeceeccccc
Confidence 222221 12 2233 2232222 34689999999999998644
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=9.5e-18 Score=133.92 Aligned_cols=160 Identities=11% Similarity=0.002 Sum_probs=111.5
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC---CCCCCceeEEEeeCCCHHHHHHHHHhccccc
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW---FPTALVDRYITFDALDPTDTALKLSLISQEI 83 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~---~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~ 83 (211)
..+|++|||||+|+||++++++|+ ++|++|++++|++.+.. ....+++ ++.+|++|++++.++++.... +
T Consensus 5 l~~k~vlITGasggiG~~~a~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~-i 77 (244)
T 3d3w_A 5 LAGRRVLVTGAGKGIGRGTVQALH-----ATGARVVAVSRTQADLDSLVRECPGIE-PVCVDLGDWEATERALGSVGP-V 77 (244)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHSTTCE-EEECCTTCHHHHHHHHTTCCC-C
T ss_pred cCCcEEEEECCCcHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHcCCCC-EEEEeCCCHHHHHHHHHHcCC-C
Confidence 346899999999999999999999 68999999999754311 0113577 889999999999999886543 8
Q ss_pred ceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCC
Q 028258 84 TNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYE 154 (211)
Q Consensus 84 ~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~ 154 (211)
|+|||+|+.... .+...+++|+.++.++++++...+.......+|+++||...+..
T Consensus 78 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~--------------- 142 (244)
T 3d3w_A 78 DLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRA--------------- 142 (244)
T ss_dssp CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSC---------------
T ss_pred CEEEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccC---------------
Confidence 999999986321 34567899999988888877653200011468888887543321
Q ss_pred CCCcCCCCCCCCCCcchhH-----HHHHhh-----cCCCceEEEecCCceEecC
Q 028258 155 VPFKEDSSRLPFPNFYYEL-----EDVSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 155 ~~~~e~~~~~~~~~~~~~~-----e~~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
.++...|.. +.+... ...++++.++||+.++++.
T Consensus 143 ----------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~ 186 (244)
T 3d3w_A 143 ----------VTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSM 186 (244)
T ss_dssp ----------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTT
T ss_pred ----------CCCCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccccccc
Confidence 011222332 222222 2368999999999998864
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=2.3e-18 Score=142.62 Aligned_cols=141 Identities=12% Similarity=0.031 Sum_probs=100.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----CCCCCceeEEEeeCCCHHHHHHHHHhcccc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----FPTALVDRYITFDALDPTDTALKLSLISQE 82 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~ 82 (211)
|+++||||||||+||++++++|+ ++|++|++++|++.... +...+++ ++.+|++|++++.+++++
T Consensus 10 m~~~ilVtGatG~iG~~l~~~L~-----~~g~~V~~l~R~~~~~~~~~~~l~~~~v~-~v~~Dl~d~~~l~~a~~~---- 79 (318)
T 2r6j_A 10 MKSKILIFGGTGYIGNHMVKGSL-----KLGHPTYVFTRPNSSKTTLLDEFQSLGAI-IVKGELDEHEKLVELMKK---- 79 (318)
T ss_dssp CCCCEEEETTTSTTHHHHHHHHH-----HTTCCEEEEECTTCSCHHHHHHHHHTTCE-EEECCTTCHHHHHHHHTT----
T ss_pred CCCeEEEECCCchHHHHHHHHHH-----HCCCcEEEEECCCCchhhHHHHhhcCCCE-EEEecCCCHHHHHHHHcC----
Confidence 45689999999999999999999 68999999999875210 0135789 999999999999999986
Q ss_pred cceEEeecccCCchhHHHHhhcHHHHHHHHHHHHhcCCCCCC-ceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCC
Q 028258 83 ITNLFWVPLQVQESEEVNIFKNSTMLKNVLSVLVSSNSGRSR-LRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDS 161 (211)
Q Consensus 83 ~~~v~~~a~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~ 161 (211)
+|.|||+++... +.++.++++++++. + +++|++ | .|+.. .+|..
T Consensus 80 ~d~vi~~a~~~~----------~~~~~~l~~aa~~~-----g~v~~~v~-S---~~g~~----------------~~~~~ 124 (318)
T 2r6j_A 80 VDVVISALAFPQ----------ILDQFKILEAIKVA-----GNIKRFLP-S---DFGVE----------------EDRIN 124 (318)
T ss_dssp CSEEEECCCGGG----------STTHHHHHHHHHHH-----CCCCEEEC-S---CCSSC----------------TTTCC
T ss_pred CCEEEECCchhh----------hHHHHHHHHHHHhc-----CCCCEEEe-e---ccccC----------------ccccc
Confidence 689999987532 33457899999887 4 788874 2 24321 12222
Q ss_pred CCCCCC-Ccchh----HHHHHhhcCCCceEEEecCCceEec
Q 028258 162 SRLPFP-NFYYE----LEDVSASYSPAITYSVHRSSVIIGA 197 (211)
Q Consensus 162 ~~~~~~-~~~~~----~e~~l~~~~~~~~~~i~Rp~~i~G~ 197 (211)
+. .| ...|. .|+++ +..+++|+++||+.+++.
T Consensus 125 ~~--~p~~~~y~sK~~~e~~~--~~~~~~~~~lr~~~~~~~ 161 (318)
T 2r6j_A 125 AL--PPFEALIERKRMIRRAI--EEANIPYTYVSANCFASY 161 (318)
T ss_dssp CC--HHHHHHHHHHHHHHHHH--HHTTCCBEEEECCEEHHH
T ss_pred CC--CCcchhHHHHHHHHHHH--HhcCCCeEEEEcceehhh
Confidence 21 12 22332 23333 347899999999988764
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=2.1e-17 Score=133.55 Aligned_cols=129 Identities=14% Similarity=0.029 Sum_probs=93.7
Q ss_pred CccccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHH
Q 028258 1 MEKQDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTA 73 (211)
Q Consensus 1 ~~~~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~ 73 (211)
|.....+.+|++|||||+|+||++++++|+ ++|++|++++|++.... ....++. ++.+|++|++++.
T Consensus 1 m~~~~~l~~k~vlVTGas~giG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~ 74 (260)
T 2ae2_A 1 MAGRWNLEGCTALVTGGSRGIGYGIVEELA-----SLGASVYTCSRNQKELNDCLTQWRSKGFKVE-ASVCDLSSRSERQ 74 (260)
T ss_dssp -CCTTCCTTCEEEEESCSSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHHHTTCEEE-EEECCTTCHHHHH
T ss_pred CCCccCCCCCEEEEECCCcHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEE-EEEcCCCCHHHHH
Confidence 444334457899999999999999999999 68999999999764311 0124577 8999999999888
Q ss_pred HHHHhcc----cccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCee
Q 028258 74 LKLSLIS----QEITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKH 136 (211)
Q Consensus 74 ~~~~~~~----~~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~ 136 (211)
++++.+. ..+|++||+|+... .++...+++|+.++.++++++...+. ..+..+|+++||...
T Consensus 75 ~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~-~~~~g~iv~isS~~~ 149 (260)
T 2ae2_A 75 ELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLK-ASERGNVVFISSVSG 149 (260)
T ss_dssp HHHHHHHHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HTSSEEEEEECCGGG
T ss_pred HHHHHHHHHcCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-hcCCcEEEEEcchhh
Confidence 7776431 12899999998632 14556789999999999888754210 013578898888543
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.73 E-value=1.7e-17 Score=133.87 Aligned_cols=125 Identities=10% Similarity=-0.034 Sum_probs=91.9
Q ss_pred ccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCC--CCCCceeEEEeeCCCHHHHHHHHHhccc
Q 028258 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF--PTALVDRYITFDALDPTDTALKLSLISQ 81 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~--~~~~~~~~i~~Dl~d~~~~~~~~~~~~~ 81 (211)
|..+++|++|||||+|+||++++++|+ ++|++|++++|++..... .... . ++.+|++|++++.++++.+..
T Consensus 1 M~~l~~k~vlVTGas~gIG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~-~-~~~~D~~~~~~~~~~~~~~~~ 73 (256)
T 2d1y_A 1 MGLFAGKGVLVTGGARGIGRAIAQAFA-----REGALVALCDLRPEGKEVAEAIGG-A-FFQVDLEDERERVRFVEEAAY 73 (256)
T ss_dssp -CTTTTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESSTTHHHHHHHHTC-E-EEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCCCEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEeCChhHHHHHHHhhC-C-EEEeeCCCHHHHHHHHHHHHH
Confidence 344557899999999999999999999 689999999998654100 0013 6 899999999988887765421
Q ss_pred ---ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCee
Q 028258 82 ---EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKH 136 (211)
Q Consensus 82 ---~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~ 136 (211)
.+|++||+|+.... ++...+++|+.++.++++++...+. ..+..+|+++||...
T Consensus 74 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~-~~~~g~iv~isS~~~ 139 (256)
T 2d1y_A 74 ALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMR-KVGGGAIVNVASVQG 139 (256)
T ss_dssp HHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHH-TTTCEEEEEECCGGG
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-hcCCcEEEEEccccc
Confidence 28999999986321 3556789999999999887764321 113578888887543
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A | Back alignment and structure |
|---|
Probab=99.73 E-value=2.9e-18 Score=144.97 Aligned_cols=132 Identities=14% Similarity=0.148 Sum_probs=99.3
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCc-EEEEEeCCCCCCCCCCCCceeEEEeeC-CCHHHHHHHHHhcccccceEEe
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRPPPGWFPTALVDRYITFDA-LDPTDTALKLSLISQEITNLFW 88 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~-~V~~~~R~~~~~~~~~~~~~~~i~~Dl-~d~~~~~~~~~~~~~~~~~v~~ 88 (211)
+|||||||||||++|+++|+ ++|+ +|+ .+|. .|++++.+++++ +|+|||
T Consensus 2 ~VlVtGatG~iG~~l~~~L~-----~~g~~~v~--------------------~~d~~~d~~~l~~~~~~----~d~Vih 52 (369)
T 3st7_A 2 NIVITGAKGFVGKNLKADLT-----STTDHHIF--------------------EVHRQTKEEELESALLK----ADFIVH 52 (369)
T ss_dssp EEEEETTTSHHHHHHHHHHH-----HHCCCEEE--------------------ECCTTCCHHHHHHHHHH----CSEEEE
T ss_pred EEEEECCCCHHHHHHHHHHH-----hCCCCEEE--------------------EECCCCCHHHHHHHhcc----CCEEEE
Confidence 69999999999999999999 5777 444 4455 678888888886 689999
Q ss_pred ecccCCc-hhHHHHhhcHHHHHHHHHHHHhcCCCCCCce-EEEEeecCeeeecccCCccccCCCCCCCCCCcCCCCCCCC
Q 028258 89 VPLQVQE-SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLR-HVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPF 166 (211)
Q Consensus 89 ~a~~~~~-~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~-~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~~~~~~ 166 (211)
+|+.... ++...+++|+.++.++++++++. +++ +|+++||..+|+. . +.
T Consensus 53 ~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-----~~~~~~v~~Ss~~~~~~---------------------~---~Y 103 (369)
T 3st7_A 53 LAGVNRPEHDKEFSLGNVSYLDHVLDILTRN-----TKKPAILLSSSIQATQD---------------------N---PY 103 (369)
T ss_dssp CCCSBCTTCSTTCSSSCCBHHHHHHHHHTTC-----SSCCEEEEEEEGGGGSC---------------------S---HH
T ss_pred CCcCCCCCCHHHHHHHHHHHHHHHHHHHHHh-----CCCCeEEEeCchhhcCC---------------------C---Cc
Confidence 9987543 45566788999999999999876 455 8999998766531 0 00
Q ss_pred CCcchhHHHHHhh--cCCCceEEEecCCceEecCCC
Q 028258 167 PNFYYELEDVSAS--YSPAITYSVHRSSVIIGASPR 200 (211)
Q Consensus 167 ~~~~~~~e~~l~~--~~~~~~~~i~Rp~~i~G~~~~ 200 (211)
...+...|+++.+ +..+++++++||+.+||+...
T Consensus 104 ~~sK~~~E~~~~~~~~~~g~~~~i~R~~~v~G~~~~ 139 (369)
T 3st7_A 104 GESKLQGEQLLREYAEEYGNTVYIYRWPNLFGKWCK 139 (369)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCC
T ss_pred hHHHHHHHHHHHHHHHHhCCCEEEEECCceeCCCCC
Confidence 1122334555544 336899999999999999753
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.73 E-value=7.4e-17 Score=130.09 Aligned_cols=160 Identities=14% Similarity=0.117 Sum_probs=111.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCC----CCCCceeEEEeeCCCHHHHHHHHHhccc--
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF----PTALVDRYITFDALDPTDTALKLSLISQ-- 81 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~----~~~~~~~~i~~Dl~d~~~~~~~~~~~~~-- 81 (211)
.+|++|||||+|+||++++++|+ ++|++|++++|++..... ....+. ++.+|++|++++.++++.+..
T Consensus 6 ~~k~~lVTGas~gIG~aia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~v~~~~~~~~~~~ 79 (257)
T 3tpc_A 6 KSRVFIVTGASSGLGAAVTRMLA-----QEGATVLGLDLKPPAGEEPAAELGAAVR-FRNADVTNEADATAALAFAKQEF 79 (257)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHH-----HTTCEEEEEESSCC------------CE-EEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEeCChHHHHHHHHHhCCceE-EEEccCCCHHHHHHHHHHHHHHc
Confidence 46899999999999999999999 689999999998764321 134678 899999999988888765421
Q ss_pred -ccceEEeecccCC-------------chhHHHHhhcHHHHHHHHHHHHhcCCCC-----CCceEEEEeecCeeeecccC
Q 028258 82 -EITNLFWVPLQVQ-------------ESEEVNIFKNSTMLKNVLSVLVSSNSGR-----SRLRHVALLTGTKHYMGPIF 142 (211)
Q Consensus 82 -~~~~v~~~a~~~~-------------~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~~~~~~s~~~~y~~~~~ 142 (211)
.+|++||+|+... .++...+++|+.++.++++++...+... .+..+|+++||...+...
T Consensus 80 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~-- 157 (257)
T 3tpc_A 80 GHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQ-- 157 (257)
T ss_dssp SCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCC--
T ss_pred CCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccCC--
Confidence 2899999998642 2455678999999999999887653211 134678888886554210
Q ss_pred CccccCCCCCCCCCCcCCCCCCCCCCcchhHHH-----HHhh-----cCCCceEEEecCCceEecC
Q 028258 143 DPSLAGQLMPYEVPFKEDSSRLPFPNFYYELED-----VSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 143 ~~~~~g~~~~~~~~~~e~~~~~~~~~~~~~~e~-----~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
+....|...| +.+. ...++++..++|+.+.++-
T Consensus 158 -----------------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~ 200 (257)
T 3tpc_A 158 -----------------------IGQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPM 200 (257)
T ss_dssp -----------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC-
T ss_pred -----------------------CCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChh
Confidence 0111232222 1111 3468999999999998864
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.73 E-value=5e-18 Score=132.13 Aligned_cols=149 Identities=16% Similarity=0.068 Sum_probs=107.7
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCC---CCCCceeEEEeeCCCHHHHHHHHHhcccccceE
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF---PTALVDRYITFDALDPTDTALKLSLISQEITNL 86 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~---~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v 86 (211)
|++|||||+|+||++++++|+ ++ +|++++|++.+... .... + ++.+|++|++++.++++.... +|.|
T Consensus 1 k~vlVtGasg~iG~~la~~l~-----~~--~V~~~~r~~~~~~~~~~~~~~-~-~~~~D~~~~~~~~~~~~~~~~-id~v 70 (207)
T 2yut_A 1 MRVLITGATGGLGGAFARALK-----GH--DLLLSGRRAGALAELAREVGA-R-ALPADLADELEAKALLEEAGP-LDLL 70 (207)
T ss_dssp CEEEEETTTSHHHHHHHHHTT-----TS--EEEEECSCHHHHHHHHHHHTC-E-ECCCCTTSHHHHHHHHHHHCS-EEEE
T ss_pred CEEEEEcCCcHHHHHHHHHHH-----hC--CEEEEECCHHHHHHHHHhccC-c-EEEeeCCCHHHHHHHHHhcCC-CCEE
Confidence 579999999999999999999 45 89999997643110 0011 7 889999999999888874222 8999
Q ss_pred EeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCC
Q 028258 87 FWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPF 157 (211)
Q Consensus 87 ~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~ 157 (211)
||+|+... .++...+++|+.++.++++++.+. +..+|+++||...|...
T Consensus 71 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~iv~~sS~~~~~~~----------------- 128 (207)
T 2yut_A 71 VHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQ-----KGARAVFFGAYPRYVQV----------------- 128 (207)
T ss_dssp EECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEE-----EEEEEEEECCCHHHHSS-----------------
T ss_pred EECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhc-----CCcEEEEEcChhhccCC-----------------
Confidence 99998632 245667899999999999998554 56899999887655310
Q ss_pred cCCCCCCCCCCcchhH-----HHHHhh-----cCCCceEEEecCCceEecC
Q 028258 158 KEDSSRLPFPNFYYEL-----EDVSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 158 ~e~~~~~~~~~~~~~~-----e~~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
++...|.. +.+... ...+++++++||+.++++.
T Consensus 129 --------~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~t~~ 171 (207)
T 2yut_A 129 --------PGFAAYAAAKGALEAYLEAARKELLREGVHLVLVRLPAVATGL 171 (207)
T ss_dssp --------TTBHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEECCCCBCSGG
T ss_pred --------CCcchHHHHHHHHHHHHHHHHHHHhhhCCEEEEEecCcccCCC
Confidence 11122322 222222 2479999999999999874
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.72 E-value=2.3e-17 Score=133.03 Aligned_cols=162 Identities=11% Similarity=0.022 Sum_probs=111.4
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC-----CC--CC-------CCceeEEEeeCCCHHHH
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-----WF--PT-------ALVDRYITFDALDPTDT 72 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~-----~~--~~-------~~~~~~i~~Dl~d~~~~ 72 (211)
+++|++|||||+|+||++++++|+ ++|++|++++|++... .. .. .+++ ++.+|++|++++
T Consensus 5 ~~~k~vlITGasggiG~~la~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~ 78 (264)
T 2pd6_A 5 LRSALALVTGAGSGIGRAVSVRLA-----GEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHA-AFQADVSEARAA 78 (264)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESSHHHHHHHHHTC------------CCE-EEECCTTSHHHH
T ss_pred cCCCEEEEECCCChHHHHHHHHHH-----HCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceE-EEEecCCCHHHH
Confidence 346899999999999999999999 6899999999975421 00 01 4678 899999999988
Q ss_pred HHHHHhccc---cc-ceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeec
Q 028258 73 ALKLSLISQ---EI-TNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMG 139 (211)
Q Consensus 73 ~~~~~~~~~---~~-~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~ 139 (211)
.++++.+.. .+ |+|||+|+... .++...+++|+.++.++++++...+.......+|+++||...+..
T Consensus 79 ~~~~~~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~ 158 (264)
T 2pd6_A 79 RCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVG 158 (264)
T ss_dssp HHHHHHHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHC
T ss_pred HHHHHHHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccC
Confidence 888776531 24 99999998642 145567899999999999887754200001368888888543321
Q ss_pred ccCCccccCCCCCCCCCCcCCCCCCCCCCcchhHHH-----HHhh-----cCCCceEEEecCCceEecCC
Q 028258 140 PIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELED-----VSAS-----YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 140 ~~~~~~~~g~~~~~~~~~~e~~~~~~~~~~~~~~e~-----~l~~-----~~~~~~~~i~Rp~~i~G~~~ 199 (211)
. ++...|...| +... ...+++++++||+.++++..
T Consensus 159 ~-------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~ 203 (264)
T 2pd6_A 159 N-------------------------VGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMT 203 (264)
T ss_dssp C-------------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC-
T ss_pred C-------------------------CCChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccch
Confidence 0 1112233222 2211 34689999999999999854
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A | Back alignment and structure |
|---|
Probab=99.72 E-value=5.5e-17 Score=129.91 Aligned_cols=161 Identities=14% Similarity=0.061 Sum_probs=110.3
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC------CCCCCceeEEEeeCCCHHHHHHHHHhcc
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW------FPTALVDRYITFDALDPTDTALKLSLIS 80 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~ 80 (211)
+.+|++|||||+|+||++++++|+ ++|++|++++|++.... ....+++ ++.+|++|++++.++++.+.
T Consensus 4 ~~~k~vlVtGasggiG~~~a~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~ 77 (251)
T 1zk4_A 4 LDGKVAIITGGTLGIGLAIATKFV-----EEGAKVMITGRHSDVGEKAAKSVGTPDQIQ-FFQHDSSDEDGWTKLFDATE 77 (251)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHCCTTTEE-EEECCTTCHHHHHHHHHHHH
T ss_pred CCCcEEEEeCCCChHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHhhccCceE-EEECCCCCHHHHHHHHHHHH
Confidence 456899999999999999999999 68999999999754210 0115688 99999999998888877642
Q ss_pred c---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCc-eEEEEeecCeeeecccCCcccc
Q 028258 81 Q---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRL-RHVALLTGTKHYMGPIFDPSLA 147 (211)
Q Consensus 81 ~---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~-~~~~~~s~~~~y~~~~~~~~~~ 147 (211)
. .+|+|||+|+... ..+...+++|+.++.++.+.+...+... +. .+|+++||...|...
T Consensus 78 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-~~~~~iv~isS~~~~~~~------- 149 (251)
T 1zk4_A 78 KAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNK-GLGASIINMSSIEGFVGD------- 149 (251)
T ss_dssp HHHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTS-SSCEEEEEECCGGGTSCC-------
T ss_pred HHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc-CCCCEEEEeCCchhccCC-------
Confidence 1 2899999998632 1345678999987777666654332111 34 788998886544210
Q ss_pred CCCCCCCCCCcCCCCCCCCCCcchh----HHHHHhh-----c--CCCceEEEecCCceEecC
Q 028258 148 GQLMPYEVPFKEDSSRLPFPNFYYE----LEDVSAS-----Y--SPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 148 g~~~~~~~~~~e~~~~~~~~~~~~~----~e~~l~~-----~--~~~~~~~i~Rp~~i~G~~ 198 (211)
+....|.. .+.+... . ..+++++++||+.++++.
T Consensus 150 -----------------~~~~~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~ 194 (251)
T 1zk4_A 150 -----------------PSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPL 194 (251)
T ss_dssp -----------------TTCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHH
T ss_pred -----------------CCCccchHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchh
Confidence 01112222 1222211 2 578999999999999874
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=3.4e-17 Score=133.68 Aligned_cols=126 Identities=16% Similarity=0.045 Sum_probs=93.6
Q ss_pred cccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHH
Q 028258 3 KQDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALK 75 (211)
Q Consensus 3 ~~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~ 75 (211)
+|..+.+|++|||||+|+||++++++|+ ++|++|++++|++.... ....++. ++.+|++|++++.++
T Consensus 16 ~m~~l~~k~vlVTGas~gIG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~-~~~~Dv~~~~~v~~~ 89 (277)
T 2rhc_B 16 HMATQDSEVALVTGATSGIGLEIARRLG-----KEGLRVFVCARGEEGLRTTLKELREAGVEAD-GRTCDVRSVPEIEAL 89 (277)
T ss_dssp TTCCTTSCEEEEETCSSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHHHTTCCEE-EEECCTTCHHHHHHH
T ss_pred ccccCCCCEEEEECCCCHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCceE-EEECCCCCHHHHHHH
Confidence 4544567899999999999999999999 68999999999764310 0134577 899999999988877
Q ss_pred HHhccc---ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhc--CCCCCCceEEEEeecCe
Q 028258 76 LSLISQ---EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSS--NSGRSRLRHVALLTGTK 135 (211)
Q Consensus 76 ~~~~~~---~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~~~~~~~s~~~ 135 (211)
++.+.. .+|++||+|+.... ++...+++|+.++.++++++... +. ..+..+|+++||..
T Consensus 90 ~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~-~~~~g~iv~isS~~ 162 (277)
T 2rhc_B 90 VAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGML-ERGTGRIVNIASTG 162 (277)
T ss_dssp HHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHH-HHTEEEEEEECCGG
T ss_pred HHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHh-hcCCeEEEEECccc
Confidence 765421 28999999986321 35567899999999998887643 10 01347888888754
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=1.6e-17 Score=133.28 Aligned_cols=163 Identities=12% Similarity=-0.005 Sum_probs=110.1
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCC-CCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR-PPPGW-------FPTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~-~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
+.+|++|||||+|+||++++++|+ ++|++|++++|+ +.... ....+++ ++.+|++|++++.++++.
T Consensus 5 l~~k~vlVTGasggiG~~~a~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~ 78 (258)
T 3afn_B 5 LKGKRVLITGSSQGIGLATARLFA-----RAGAKVGLHGRKAPANIDETIASMRADGGDAA-FFAADLATSEACQQLVDE 78 (258)
T ss_dssp GTTCEEEETTCSSHHHHHHHHHHH-----HTTCEEEEEESSCCTTHHHHHHHHHHTTCEEE-EEECCTTSHHHHHHHHHH
T ss_pred CCCCEEEEeCCCChHHHHHHHHHH-----HCCCEEEEECCCchhhHHHHHHHHHhcCCceE-EEECCCCCHHHHHHHHHH
Confidence 456899999999999999999999 689999999998 44311 0124678 899999999988888775
Q ss_pred ccc---ccceEEeeccc-CC---------chhHHHHhhcHHHHHHHHHHHHhcCCC-C---CCceEEEEeecCeeeeccc
Q 028258 79 ISQ---EITNLFWVPLQ-VQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSG-R---SRLRHVALLTGTKHYMGPI 141 (211)
Q Consensus 79 ~~~---~~~~v~~~a~~-~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~-~---~~~~~~~~~s~~~~y~~~~ 141 (211)
+.. .+|+|||+|+. .. ..+...+++|+.++.++++++...+.. . ....+|+++||...+..+
T Consensus 79 ~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~- 157 (258)
T 3afn_B 79 FVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGG- 157 (258)
T ss_dssp HHHHHSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHCC-
T ss_pred HHHHcCCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccCC-
Confidence 421 28999999985 21 124556789999998888876543100 0 011678888775433200
Q ss_pred CCccccCCCCCCCCCCcCCCCCCCCCCcchhH-----HHHHhh-----cCCCceEEEecCCceEecCC
Q 028258 142 FDPSLAGQLMPYEVPFKEDSSRLPFPNFYYEL-----EDVSAS-----YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 142 ~~~~~~g~~~~~~~~~~e~~~~~~~~~~~~~~-----e~~l~~-----~~~~~~~~i~Rp~~i~G~~~ 199 (211)
. ++...|.. +.+.+. ...+++++++||+.++++..
T Consensus 158 -------------------~----~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~ 202 (258)
T 3afn_B 158 -------------------G----PGAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFH 202 (258)
T ss_dssp -------------------C----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGG
T ss_pred -------------------C----CCchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCcccccc
Confidence 0 11122322 222221 24589999999999998753
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.72 E-value=9.4e-18 Score=135.32 Aligned_cols=168 Identities=9% Similarity=-0.004 Sum_probs=113.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----C---CCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----F---PTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----~---~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
++|++|||||+|+||++++++|+ ++|++|++++|+..+.. . ...+++ ++.+|++|++++.++++.+
T Consensus 13 ~~k~vlITGasggiG~~~a~~l~-----~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~ 86 (265)
T 1h5q_A 13 VNKTIIVTGGNRGIGLAFTRAVA-----AAGANVAVIYRSAADAVEVTEKVGKEFGVKTK-AYQCDVSNTDIVTKTIQQI 86 (265)
T ss_dssp TTEEEEEETTTSHHHHHHHHHHH-----HTTEEEEEEESSCTTHHHHHHHHHHHHTCCEE-EEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHH-----HCCCeEEEEeCcchhhHHHHHHHHHhcCCeeE-EEEeeCCCHHHHHHHHHHH
Confidence 46789999999999999999999 68999999999755311 0 134678 8999999999888887764
Q ss_pred cc---ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCcccc
Q 028258 80 SQ---EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLA 147 (211)
Q Consensus 80 ~~---~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~ 147 (211)
.. .+|++||+|+.... ++...+++|+.++.++++++...+.......+|+++||...+....
T Consensus 87 ~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~------ 160 (265)
T 1h5q_A 87 DADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQ------ 160 (265)
T ss_dssp HHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCE------
T ss_pred HHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhcccc------
Confidence 31 38999999986321 3455679999999998888765310011237889988865442110
Q ss_pred CCCCCCCCCCcCCCCCCCCCCcchhHHH-----HHhh-----cCCCceEEEecCCceEecCC
Q 028258 148 GQLMPYEVPFKEDSSRLPFPNFYYELED-----VSAS-----YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 148 g~~~~~~~~~~e~~~~~~~~~~~~~~e~-----~l~~-----~~~~~~~~i~Rp~~i~G~~~ 199 (211)
....+ ..+...|...| +... ...+++++++||+.++++..
T Consensus 161 ----------~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~ 210 (265)
T 1h5q_A 161 ----------SSLNG--SLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQT 210 (265)
T ss_dssp ----------EETTE--ECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGG
T ss_pred ----------ccccc--cccccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccccccc
Confidence 00011 11222233222 2221 34589999999999998743
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.72 E-value=2.4e-16 Score=128.70 Aligned_cols=165 Identities=14% Similarity=-0.027 Sum_probs=113.7
Q ss_pred cccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------------------CCCCCceeEEE
Q 028258 3 KQDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------------------FPTALVDRYIT 63 (211)
Q Consensus 3 ~~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------------------~~~~~~~~~i~ 63 (211)
.|....+|++|||||+|+||++++++|+ ++|++|++++|++.... .....+. ++.
T Consensus 4 ~m~~l~~k~~lVTGas~gIG~a~a~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 77 (281)
T 3s55_A 4 SMADFEGKTALITGGARGMGRSHAVALA-----EAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCI-SAK 77 (281)
T ss_dssp --CTTTTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEE-EEE
T ss_pred cccccCCCEEEEeCCCchHHHHHHHHHH-----HCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEE-EEe
Confidence 3555567999999999999999999999 69999999999743210 0134677 899
Q ss_pred eeCCCHHHHHHHHHhccc---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEe
Q 028258 64 FDALDPTDTALKLSLISQ---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALL 131 (211)
Q Consensus 64 ~Dl~d~~~~~~~~~~~~~---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~ 131 (211)
+|++|++++.+.++.+.. .+|++||+|+... .++...+++|+.++.++++++...+... +..+|+++
T Consensus 78 ~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~i 156 (281)
T 3s55_A 78 VDVKDRAALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKR-NYGRIVTV 156 (281)
T ss_dssp CCTTCHHHHHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEE
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCCEEEEE
Confidence 999999988888765421 3899999998642 1456678999999999888864421001 34688888
Q ss_pred ecCeeeecccCCccccCCCCCCCCCCcCCCCCCCCCCcchhHHH-----HHhh-----cCCCceEEEecCCceEecCC
Q 028258 132 TGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELED-----VSAS-----YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 132 s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~~~~~~~~~~~~~e~-----~l~~-----~~~~~~~~i~Rp~~i~G~~~ 199 (211)
||...+... ++...|...| +.+. ...|+++..++|+.++++..
T Consensus 157 sS~~~~~~~-------------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~ 209 (281)
T 3s55_A 157 SSMLGHSAN-------------------------FAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMT 209 (281)
T ss_dssp CCGGGGSCC-------------------------TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTT
T ss_pred CChhhcCCC-------------------------CCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccc
Confidence 885443210 1111232222 1111 34689999999999998753
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=5.4e-17 Score=130.95 Aligned_cols=160 Identities=14% Similarity=0.016 Sum_probs=112.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCC----CCCCceeEEEeeCCCHHHHHHHHHhccc--
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF----PTALVDRYITFDALDPTDTALKLSLISQ-- 81 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~----~~~~~~~~i~~Dl~d~~~~~~~~~~~~~-- 81 (211)
.+|++|||||+|+||++++++|+ ++|++|++++|+...... ...++. ++.+|++|++++.++++.+..
T Consensus 11 ~~k~vlVTGasggiG~~~a~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~D~~~~~~v~~~~~~~~~~~ 84 (265)
T 2o23_A 11 KGLVAVITGGASGLGLATAERLV-----GQGASAVLLDLPNSGGEAQAKKLGNNCV-FAPADVTSEKDVQTALALAKGKF 84 (265)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEECTTSSHHHHHHHHCTTEE-EEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHH-----HCCCEEEEEeCCcHhHHHHHHHhCCceE-EEEcCCCCHHHHHHHHHHHHHHC
Confidence 46899999999999999999999 689999999998754210 124678 999999999988888775421
Q ss_pred -ccceEEeecccCC---------------chhHHHHhhcHHHHHHHHHHHHhcCCCC-----CCceEEEEeecCeeeecc
Q 028258 82 -EITNLFWVPLQVQ---------------ESEEVNIFKNSTMLKNVLSVLVSSNSGR-----SRLRHVALLTGTKHYMGP 140 (211)
Q Consensus 82 -~~~~v~~~a~~~~---------------~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~~~~~~s~~~~y~~~ 140 (211)
.+|+|||+|+... .++...+++|+.++.++++++...+... .+..+|+++||...+...
T Consensus 85 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~ 164 (265)
T 2o23_A 85 GRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQ 164 (265)
T ss_dssp SCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCC
T ss_pred CCCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcCCC
Confidence 2899999998631 1355678999999999998887653111 035788888886544210
Q ss_pred cCCccccCCCCCCCCCCcCCCCCCCCCCcchhHHH-----HHhh-----cCCCceEEEecCCceEecC
Q 028258 141 IFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELED-----VSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 141 ~~~~~~~g~~~~~~~~~~e~~~~~~~~~~~~~~e~-----~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
++...|...| +... ...++++.+++|+.+.++.
T Consensus 165 -------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 207 (265)
T 2o23_A 165 -------------------------VGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPL 207 (265)
T ss_dssp -------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC-
T ss_pred -------------------------CCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCcc
Confidence 1112232222 1111 3468999999999998764
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=99.72 E-value=1.3e-16 Score=131.42 Aligned_cols=163 Identities=14% Similarity=-0.010 Sum_probs=112.3
Q ss_pred cCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCC-CCceeEEEeeCCCHHHHHHHH
Q 028258 5 DQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPT-ALVDRYITFDALDPTDTALKL 76 (211)
Q Consensus 5 ~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~-~~~~~~i~~Dl~d~~~~~~~~ 76 (211)
....+|++|||||+|+||++++++|+ ++|++|++++|+..... ... ..+. ++.+|++|++++.+++
T Consensus 37 ~~l~~k~vlVTGas~GIG~aia~~la-----~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~-~~~~Dv~d~~~v~~~~ 110 (293)
T 3rih_A 37 FDLSARSVLVTGGTKGIGRGIATVFA-----RAGANVAVAARSPRELSSVTAELGELGAGNVI-GVRLDVSDPGSCADAA 110 (293)
T ss_dssp TCCTTCEEEETTTTSHHHHHHHHHHH-----HTTCEEEEEESSGGGGHHHHHHHTTSSSSCEE-EEECCTTCHHHHHHHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHHHhhCCCcEE-EEEEeCCCHHHHHHHH
Confidence 33457899999999999999999999 69999999999865421 011 4678 8999999999887777
Q ss_pred Hhccc---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCc
Q 028258 77 SLISQ---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDP 144 (211)
Q Consensus 77 ~~~~~---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~ 144 (211)
+.+.. .+|++||+|+... .++...+++|+.++.++++++...+... +..+|+++||...+..
T Consensus 111 ~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~iV~isS~~~~~~----- 184 (293)
T 3rih_A 111 RTVVDAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTAS-GRGRVILTSSITGPVT----- 184 (293)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHH-SSCEEEEECCSBTTTB-----
T ss_pred HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCCEEEEEeChhhccC-----
Confidence 65421 3899999998632 1456678999999999888874221001 3468888887542200
Q ss_pred cccCCCCCCCCCCcCCCCCCCCCCcchhHHH-----HHhh-----cCCCceEEEecCCceEecC
Q 028258 145 SLAGQLMPYEVPFKEDSSRLPFPNFYYELED-----VSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 145 ~~~g~~~~~~~~~~e~~~~~~~~~~~~~~e~-----~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
+ . +....|...| +.+. ...|+.+..++|+.++++.
T Consensus 185 ---~------------~----~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~ 229 (293)
T 3rih_A 185 ---G------------Y----PGWSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEG 229 (293)
T ss_dssp ---B------------C----TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHH
T ss_pred ---C------------C----CCCHHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcc
Confidence 0 0 1112232222 1111 3468999999999999863
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=3.4e-17 Score=131.31 Aligned_cols=161 Identities=15% Similarity=0.038 Sum_probs=111.7
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC-CC-------CCCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP-GW-------FPTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~-~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
+++|++|||||+|+||++++++|+ ++|++|++++|+... .. .....+. ++.+|++|++++.+.++.
T Consensus 2 l~~k~~lVTGas~gIG~~ia~~l~-----~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dv~d~~~v~~~~~~ 75 (246)
T 3osu_A 2 KMTKSALVTGASRGIGRSIALQLA-----EEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSF-AIQANVADADEVKAMIKE 75 (246)
T ss_dssp CCSCEEEETTCSSHHHHHHHHHHH-----HTTCEEEEEESSCHHHHHHHHHHHHHTTSCEE-EEECCTTCHHHHHHHHHH
T ss_pred CCCCEEEEECCCChHHHHHHHHHH-----HCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEE-EEEccCCCHHHHHHHHHH
Confidence 457899999999999999999999 699999998886421 00 0135677 899999999988887765
Q ss_pred ccc---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccc
Q 028258 79 ISQ---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSL 146 (211)
Q Consensus 79 ~~~---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~ 146 (211)
+.. .+|++||+|+... .++...+++|+.++.++++++...+. ..+..+|+++||...+...
T Consensus 76 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~-~~~~g~iv~isS~~~~~~~------ 148 (246)
T 3osu_A 76 VVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQML-RQRSGAIINLSSVVGAVGN------ 148 (246)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHTCEEEEEECCHHHHHCC------
T ss_pred HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-HcCCCEEEEEcchhhcCCC------
Confidence 421 2899999998642 14556789999999999988843210 0134688888875443210
Q ss_pred cCCCCCCCCCCcCCCCCCCCCCcchhHHH-----HHhh-----cCCCceEEEecCCceEecCC
Q 028258 147 AGQLMPYEVPFKEDSSRLPFPNFYYELED-----VSAS-----YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 147 ~g~~~~~~~~~~e~~~~~~~~~~~~~~e~-----~l~~-----~~~~~~~~i~Rp~~i~G~~~ 199 (211)
++...|...| +.+. ...++++..++|+.+.++-.
T Consensus 149 -------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~ 192 (246)
T 3osu_A 149 -------------------PGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMT 192 (246)
T ss_dssp -------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCC
T ss_pred -------------------CCChHHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCcc
Confidence 1112232222 1111 35689999999999988753
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.72 E-value=1.7e-17 Score=131.78 Aligned_cols=122 Identities=16% Similarity=-0.028 Sum_probs=89.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC---CCCCCceeEEEeeCCCHHHHHHHHHhccc---
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW---FPTALVDRYITFDALDPTDTALKLSLISQ--- 81 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~---~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~--- 81 (211)
|+|++|||||+|+||++++++|+ ++|++|++++|++.... ....+++ ++.+|++|++++.+.++.+..
T Consensus 4 ~~k~vlVtGasggiG~~~a~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~ 77 (234)
T 2ehd_A 4 MKGAVLITGASRGIGEATARLLH-----AKGYRVGLMARDEKRLQALAAELEGAL-PLPGDVREEGDWARAVAAMEEAFG 77 (234)
T ss_dssp CCCEEEESSTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHSTTCE-EEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCcHHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHhhhce-EEEecCCCHHHHHHHHHHHHHHcC
Confidence 46889999999999999999999 68999999999754311 0113678 999999999988887765421
Q ss_pred ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCee
Q 028258 82 EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKH 136 (211)
Q Consensus 82 ~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~ 136 (211)
.+|++||+|+... .++...+++|+.++.++++.+...+. ..+..+|+++||...
T Consensus 78 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~-~~~~~~iv~isS~~~ 140 (234)
T 2ehd_A 78 ELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALL-RRGGGTIVNVGSLAG 140 (234)
T ss_dssp CCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH-TTTCEEEEEECCTTT
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-hCCCcEEEEECCchh
Confidence 2899999998632 13456778999988766655543211 114578999988543
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.72 E-value=6.8e-17 Score=132.00 Aligned_cols=173 Identities=9% Similarity=-0.074 Sum_probs=117.9
Q ss_pred cccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------------------CCCCCceeEEE
Q 028258 3 KQDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------------------FPTALVDRYIT 63 (211)
Q Consensus 3 ~~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------------------~~~~~~~~~i~ 63 (211)
.|...++|++|||||+|+||++++++|+ ++|++|++++|+..... .....+. ++.
T Consensus 4 ~m~~l~gk~vlVTGas~gIG~~ia~~l~-----~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 77 (287)
T 3pxx_A 4 SMGRVQDKVVLVTGGARGQGRSHAVKLA-----EEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAY-TAE 77 (287)
T ss_dssp SCCTTTTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEE-EEE
T ss_pred cccccCCCEEEEeCCCChHHHHHHHHHH-----HCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceE-EEE
Confidence 3555668999999999999999999999 69999999998733110 0134678 899
Q ss_pred eeCCCHHHHHHHHHhccc---ccceEEeecccCC-------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeec
Q 028258 64 FDALDPTDTALKLSLISQ---EITNLFWVPLQVQ-------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTG 133 (211)
Q Consensus 64 ~Dl~d~~~~~~~~~~~~~---~~~~v~~~a~~~~-------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~ 133 (211)
+|++|++++.+.++.+.. .+|++||+|+... .++...+++|+.++.++++++...+ .+-.+|+++||
T Consensus 78 ~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~---~~~g~iv~isS 154 (287)
T 3pxx_A 78 VDVRDRAAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYL---TSGASIITTGS 154 (287)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGC---CTTCEEEEECC
T ss_pred ccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHh---hcCcEEEEecc
Confidence 999999988877765421 2899999998632 2566788999999999999998763 23357888888
Q ss_pred CeeeecccCCccccCCCCCCCCCCcCCCCCCCCCCcchhHHHH-----Hhh-----cCCCceEEEecCCceEecC
Q 028258 134 TKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDV-----SAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 134 ~~~y~~~~~~~~~~g~~~~~~~~~~e~~~~~~~~~~~~~~e~~-----l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
...+.... ..+..+..+. ++...|...|. .+. ...++.+..++|+.+..+-
T Consensus 155 ~~~~~~~~------------~~~~~~~~~~--~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~ 215 (287)
T 3pxx_A 155 VAGLIAAA------------QPPGAGGPQG--PGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDM 215 (287)
T ss_dssp HHHHHHHH------------CCC-----CH--HHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTT
T ss_pred chhccccc------------ccccccccCC--CccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccc
Confidence 66554221 1122222221 11222332222 111 3458999999999998764
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=1.8e-17 Score=132.44 Aligned_cols=161 Identities=14% Similarity=0.022 Sum_probs=109.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----C---CCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----F---PTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----~---~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
++|++|||||||+||++++++|+ ++|++|++++|++.+.. . ....+. ++.+|++|++++.++++.+
T Consensus 6 ~~~~vlVtGasggiG~~la~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~ 79 (248)
T 2pnf_A 6 QGKVSLVTGSTRGIGRAIAEKLA-----SAGSTVIITGTSGERAKAVAEEIANKYGVKAH-GVEMNLLSEESINKAFEEI 79 (248)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHH-----HTTCEEEEEESSHHHHHHHHHHHHHHHCCCEE-EEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHH-----HCCCEEEEEeCChHHHHHHHHHHHhhcCCceE-EEEccCCCHHHHHHHHHHH
Confidence 46899999999999999999999 68999999999754311 0 124678 8999999999988887754
Q ss_pred cc---ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCcccc
Q 028258 80 SQ---EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLA 147 (211)
Q Consensus 80 ~~---~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~ 147 (211)
.. .+|.|||+|+.... ++...+++|+.++.++++++...+. ..+..+|+++||...+.+.
T Consensus 80 ~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~-~~~~~~iv~~sS~~~~~~~------- 151 (248)
T 2pnf_A 80 YNLVDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMI-KQRWGRIVNISSVVGFTGN------- 151 (248)
T ss_dssp HHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHH-HHTCEEEEEECCHHHHHCC-------
T ss_pred HHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHH-hcCCcEEEEEccHHhcCCC-------
Confidence 21 28999999986431 3456789999999776665543210 0135788998875433110
Q ss_pred CCCCCCCCCCcCCCCCCCCCCcchh----HHHHHhh-----cCCCceEEEecCCceEecCC
Q 028258 148 GQLMPYEVPFKEDSSRLPFPNFYYE----LEDVSAS-----YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 148 g~~~~~~~~~~e~~~~~~~~~~~~~----~e~~l~~-----~~~~~~~~i~Rp~~i~G~~~ 199 (211)
+....|.. .+.+... ...+++++++||+.++++..
T Consensus 152 -----------------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~ 195 (248)
T 2pnf_A 152 -----------------VGQVNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMT 195 (248)
T ss_dssp -----------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGG
T ss_pred -----------------CCCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchh
Confidence 00111221 1222111 34689999999999998753
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.71 E-value=4.9e-17 Score=129.67 Aligned_cols=167 Identities=11% Similarity=0.063 Sum_probs=110.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCC--cEEEEEeCCCCCCC----CCCCCceeEEEeeCCCHHHHHHHHHhccc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSP--WKVYGAARRPPPGW----FPTALVDRYITFDALDPTDTALKLSLISQ 81 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g--~~V~~~~R~~~~~~----~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~ 81 (211)
++|++|||||+|+||++++++|+ ++| ++|++++|++.... ....+++ ++.+|++|++++.++++.+..
T Consensus 2 ~~k~vlItGasggiG~~la~~l~-----~~g~~~~V~~~~r~~~~~~~l~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~ 75 (250)
T 1yo6_A 2 SPGSVVVTGANRGIGLGLVQQLV-----KDKNIRHIIATARDVEKATELKSIKDSRVH-VLPLTVTCDKSLDTFVSKVGE 75 (250)
T ss_dssp CCSEEEESSCSSHHHHHHHHHHH-----TCTTCCEEEEEESSGGGCHHHHTCCCTTEE-EEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEecCCchHHHHHHHHHH-----hcCCCcEEEEEecCHHHHHHHHhccCCceE-EEEeecCCHHHHHHHHHHHHH
Confidence 45899999999999999999999 688 99999999765421 1135788 999999999988887775421
Q ss_pred -----ccceEEeecccCC----------chhHHHHhhcHHHHHHHHHHHHhcCCCC-----CC-----ceEEEEeecCee
Q 028258 82 -----EITNLFWVPLQVQ----------ESEEVNIFKNSTMLKNVLSVLVSSNSGR-----SR-----LRHVALLTGTKH 136 (211)
Q Consensus 82 -----~~~~v~~~a~~~~----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~-----~~~~~~~s~~~~ 136 (211)
.+|+|||+|+... .++...+++|+.++.++++++...+... ++ ..+|+++||...
T Consensus 76 ~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~ 155 (250)
T 1yo6_A 76 IVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLG 155 (250)
T ss_dssp HHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGG
T ss_pred hcCCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCcc
Confidence 2899999998643 1345678999999988888776532000 01 468888888654
Q ss_pred eecccCCccccCCCCCCCCCCcCCCCCCCCCCcchhHHHH-----Hhh-----cCCCceEEEecCCceEecC
Q 028258 137 YMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDV-----SAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 137 y~~~~~~~~~~g~~~~~~~~~~e~~~~~~~~~~~~~~e~~-----l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
+... + .+..+ +.+...|...|. ... ...++.+.++||+.+..+-
T Consensus 156 ~~~~---------------~-~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 209 (250)
T 1yo6_A 156 SITD---------------N-TSGSA--QFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNL 209 (250)
T ss_dssp CSTT---------------C-CSTTS--SSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC----
T ss_pred ccCC---------------c-ccccc--cCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCC
Confidence 4311 0 01111 112222332222 211 2358999999999997764
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=1.8e-17 Score=133.58 Aligned_cols=161 Identities=11% Similarity=-0.094 Sum_probs=109.2
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeC-CCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAAR-RPPPGW-------FPTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R-~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
+.+|++|||||+|+||++++++|+ ++|++|++++| ++.... .....+. ++.+|++|++++.+.++.
T Consensus 5 l~~k~vlITGasggiG~~~a~~l~-----~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~-~~~~D~~~~~~~~~~~~~ 78 (261)
T 1gee_A 5 LEGKVVVITGSSTGLGKSMAIRFA-----TEKAKVVVNYRSKEDEANSVLEEIKKVGGEAI-AVKGDVTVESDVINLVQS 78 (261)
T ss_dssp GTTCEEEETTCSSHHHHHHHHHHH-----HTTCEEEEEESSCHHHHHHHHHHHHHTTCEEE-EEECCTTSHHHHHHHHHH
T ss_pred CCCCEEEEeCCCChHHHHHHHHHH-----HCCCEEEEEcCCChHHHHHHHHHHHhcCCceE-EEECCCCCHHHHHHHHHH
Confidence 346899999999999999999999 68999999999 533210 0124577 899999999988887765
Q ss_pred ccc---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccc
Q 028258 79 ISQ---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSL 146 (211)
Q Consensus 79 ~~~---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~ 146 (211)
+.. .+|+|||+|+... .++...+++|+.++.++++++...+.......+|+++||...+.
T Consensus 79 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~-------- 150 (261)
T 1gee_A 79 AIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKI-------- 150 (261)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTS--------
T ss_pred HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcC--------
Confidence 421 2899999998632 13456779999998888877664321011146888888743221
Q ss_pred cCCCCCCCCCCcCCCCCCCCCCcchhHHH-----HHhh-----cCCCceEEEecCCceEecC
Q 028258 147 AGQLMPYEVPFKEDSSRLPFPNFYYELED-----VSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 147 ~g~~~~~~~~~~e~~~~~~~~~~~~~~e~-----~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
+ .++...|...| +... ...+++++++||+.++++.
T Consensus 151 ---------------~--~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 195 (261)
T 1gee_A 151 ---------------P--WPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPI 195 (261)
T ss_dssp ---------------C--CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGG
T ss_pred ---------------C--CCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCch
Confidence 0 01122233222 1111 3468999999999999874
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.71 E-value=5.9e-17 Score=133.42 Aligned_cols=160 Identities=14% Similarity=-0.044 Sum_probs=110.3
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC------------CCCCCceeEEEeeCCCHHHHHH
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW------------FPTALVDRYITFDALDPTDTAL 74 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~------------~~~~~~~~~i~~Dl~d~~~~~~ 74 (211)
+.+|++|||||+|+||++++++|+ ++|++|++++|+..... ....++. ++.+|++|++++.+
T Consensus 16 l~~k~vlVTGasggIG~~la~~l~-----~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~D~~~~~~v~~ 89 (303)
T 1yxm_A 16 LQGQVAIVTGGATGIGKAIVKELL-----ELGSNVVIASRKLERLKSAADELQANLPPTKQARVI-PIQCNIRNEEEVNN 89 (303)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEE-EEECCTTCHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEE-EEecCCCCHHHHHH
Confidence 346899999999999999999999 68999999999754210 0135688 99999999998888
Q ss_pred HHHhccc---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccC
Q 028258 75 KLSLISQ---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIF 142 (211)
Q Consensus 75 ~~~~~~~---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~ 142 (211)
+++.+.. .+|+|||+|+... .++...+++|+.++.++++++...+- ..+..+|+++||...++.
T Consensus 90 ~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-~~~~~~iv~isS~~~~~~--- 165 (303)
T 1yxm_A 90 LVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWM-KEHGGSIVNIIVPTKAGF--- 165 (303)
T ss_dssp HHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTH-HHHCEEEEEECCCCTTCC---
T ss_pred HHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-HhcCCeEEEEEeecccCC---
Confidence 8776421 2899999998532 13456789999999999998765210 002367888877541110
Q ss_pred CccccCCCCCCCCCCcCCCCCCCCCCcchh-------HHHHHhh--cCCCceEEEecCCceEecC
Q 028258 143 DPSLAGQLMPYEVPFKEDSSRLPFPNFYYE-------LEDVSAS--YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 143 ~~~~~g~~~~~~~~~~e~~~~~~~~~~~~~-------~e~~l~~--~~~~~~~~i~Rp~~i~G~~ 198 (211)
+....|.. ..+.+.. ...+++++++||+.++|+.
T Consensus 166 ----------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 208 (303)
T 1yxm_A 166 ----------------------PLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQT 208 (303)
T ss_dssp ----------------------TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTG
T ss_pred ----------------------CcchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccch
Confidence 01111211 1122222 3358999999999999983
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=99.71 E-value=2.3e-16 Score=127.22 Aligned_cols=119 Identities=17% Similarity=0.049 Sum_probs=91.4
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhccc---cc
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQ---EI 83 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~---~~ 83 (211)
+++|++|||||+|+||++++++|+ ++|++|++++|++++. ..+. ++.+|++|++++.++++.+.. .+
T Consensus 19 l~~k~vlVTGas~gIG~aia~~l~-----~~G~~V~~~~r~~~~~----~~~~-~~~~Dl~d~~~v~~~~~~~~~~~g~i 88 (253)
T 2nm0_A 19 HMSRSVLVTGGNRGIGLAIARAFA-----DAGDKVAITYRSGEPP----EGFL-AVKCDITDTEQVEQAYKEIEETHGPV 88 (253)
T ss_dssp -CCCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESSSCCC----TTSE-EEECCTTSHHHHHHHHHHHHHHTCSC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEeCChHhh----ccce-EEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 357899999999999999999999 6899999999986643 3478 999999999988887766421 27
Q ss_pred ceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCee
Q 028258 84 TNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKH 136 (211)
Q Consensus 84 ~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~ 136 (211)
|++||+|+... .++...+++|+.++.++++++...+... +..+|+++||...
T Consensus 89 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-~~g~iv~isS~~~ 149 (253)
T 2nm0_A 89 EVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRA-KKGRVVLISSVVG 149 (253)
T ss_dssp SEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHH-TCEEEEEECCCCC
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEECchhh
Confidence 99999998632 2566788999999988888765432000 3468888887543
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.71 E-value=1.5e-16 Score=123.45 Aligned_cols=142 Identities=16% Similarity=0.124 Sum_probs=102.9
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccceEEeec
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITNLFWVP 90 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~~~a 90 (211)
++|||||||+||++++++|+ +|++|++++|++. .+.+|++|++++.++++++.. +|+|||+|
T Consensus 5 ~vlVtGasg~iG~~~~~~l~------~g~~V~~~~r~~~-----------~~~~D~~~~~~~~~~~~~~~~-~d~vi~~a 66 (202)
T 3d7l_A 5 KILLIGASGTLGSAVKERLE------KKAEVITAGRHSG-----------DVTVDITNIDSIKKMYEQVGK-VDAIVSAT 66 (202)
T ss_dssp EEEEETTTSHHHHHHHHHHT------TTSEEEEEESSSS-----------SEECCTTCHHHHHHHHHHHCC-EEEEEECC
T ss_pred EEEEEcCCcHHHHHHHHHHH------CCCeEEEEecCcc-----------ceeeecCCHHHHHHHHHHhCC-CCEEEECC
Confidence 69999999999999999998 5799999999753 467999999999999887643 89999999
Q ss_pred ccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCC
Q 028258 91 LQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDS 161 (211)
Q Consensus 91 ~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~ 161 (211)
+.... .+...+++|+.++.++++++...+ .+-.+|+++||...+. +.
T Consensus 67 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~iv~~sS~~~~~-----------------~~---- 122 (202)
T 3d7l_A 67 GSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSL---NDKGSFTLTTGIMMED-----------------PI---- 122 (202)
T ss_dssp CCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGE---EEEEEEEEECCGGGTS-----------------CC----
T ss_pred CCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHh---ccCCEEEEEcchhhcC-----------------CC----
Confidence 85321 234567899999999999887652 1125788887743321 00
Q ss_pred CCCCCCCcchh-----HHHHHhh-c---CCCceEEEecCCceEecC
Q 028258 162 SRLPFPNFYYE-----LEDVSAS-Y---SPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 162 ~~~~~~~~~~~-----~e~~l~~-~---~~~~~~~i~Rp~~i~G~~ 198 (211)
++...|. .+.+.+. + ..+++++++||+.++++.
T Consensus 123 ----~~~~~Y~~sK~~~~~~~~~~~~e~~~gi~v~~v~pg~v~~~~ 164 (202)
T 3d7l_A 123 ----VQGASAAMANGAVTAFAKSAAIEMPRGIRINTVSPNVLEESW 164 (202)
T ss_dssp ----TTCHHHHHHHHHHHHHHHHHTTSCSTTCEEEEEEECCBGGGH
T ss_pred ----CccHHHHHHHHHHHHHHHHHHHHccCCeEEEEEecCccCCch
Confidence 1112232 2333322 1 248999999999999873
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=1.1e-16 Score=128.60 Aligned_cols=161 Identities=16% Similarity=0.012 Sum_probs=106.9
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCC-CCCC----CCCCCceeEEEeeCCCHHHHHHHHHhccc
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP-PPGW----FPTALVDRYITFDALDPTDTALKLSLISQ 81 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~-~~~~----~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~ 81 (211)
+++|++|||||+|+||++++++|+ ++|++|++++|++ .... ....++. ++.+|++|++++.++++.+..
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~v~~~~~~~~~ 78 (249)
T 2ew8_A 5 LKDKLAVITGGANGIGRAIAERFA-----VEGADIAIADLVPAPEAEAAIRNLGRRVL-TVKCDVSQPGDVEAFGKQVIS 78 (249)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESSCCHHHHHHHHHTTCCEE-EEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEcCCchhHHHHHHHhcCCcEE-EEEeecCCHHHHHHHHHHHHH
Confidence 346899999999999999999999 6899999999987 3210 0134678 899999999988877765321
Q ss_pred ---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCC
Q 028258 82 ---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQ 149 (211)
Q Consensus 82 ---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~ 149 (211)
.+|++||+|+... .++...+++|+.++.++++++...+... +..+|+++||...|..
T Consensus 79 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~---------- 147 (249)
T 2ew8_A 79 TFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRN-GWGRIINLTSTTYWLK---------- 147 (249)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGGSC----------
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCeEEEEEcchhhccC----------
Confidence 3899999998632 1355678999999877777743321001 3578898888654421
Q ss_pred CCCCCCCCcCCCCCCCCCCcchh----HHHHHhh-----cCCCceEEEecCCceEecC
Q 028258 150 LMPYEVPFKEDSSRLPFPNFYYE----LEDVSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 150 ~~~~~~~~~e~~~~~~~~~~~~~----~e~~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
. +....|.. .+.+.+. ...++++..++|+.+.++-
T Consensus 148 -----------~---~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 191 (249)
T 2ew8_A 148 -----------I---EAYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTAT 191 (249)
T ss_dssp -----------C---SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC----
T ss_pred -----------C---CCchhHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCcc
Confidence 0 01112222 1212111 3468999999999998764
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.71 E-value=7.4e-17 Score=128.45 Aligned_cols=117 Identities=9% Similarity=0.010 Sum_probs=89.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcc-----cc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLIS-----QE 82 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~-----~~ 82 (211)
++|++|||||+|+||++++++|+ ++|++|++++|++.... .... ++.+|++|++++.+.++.+. ..
T Consensus 2 ~~k~vlITGas~gIG~~~a~~l~-----~~G~~V~~~~r~~~~~~---~~~~-~~~~D~~~~~~~~~~~~~~~~~~~~g~ 72 (236)
T 1ooe_A 2 SSGKVIVYGGKGALGSAILEFFK-----KNGYTVLNIDLSANDQA---DSNI-LVDGNKNWTEQEQSILEQTASSLQGSQ 72 (236)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHH-----HTTEEEEEEESSCCTTS---SEEE-ECCTTSCHHHHHHHHHHHHHHHHTTCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHH-----HCCCEEEEEecCccccc---cccE-EEeCCCCCHHHHHHHHHHHHHHhCCCC
Confidence 35789999999999999999999 68999999999876532 3456 78899999988877776431 12
Q ss_pred cceEEeecccCC----------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCee
Q 028258 83 ITNLFWVPLQVQ----------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKH 136 (211)
Q Consensus 83 ~~~v~~~a~~~~----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~ 136 (211)
+|++||+|+... .++...+++|+.++.++++++...+. +-.+|+++||...
T Consensus 73 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~---~~g~iv~isS~~~ 133 (236)
T 1ooe_A 73 VDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLK---PGGLLQLTGAAAA 133 (236)
T ss_dssp EEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEE---EEEEEEEECCGGG
T ss_pred CCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhc---cCCEEEEECchhh
Confidence 899999998532 13455778999999999998877521 1247888887543
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.71 E-value=1.3e-16 Score=129.33 Aligned_cols=125 Identities=16% Similarity=0.024 Sum_probs=90.2
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC-------C--CCCCCceeEEEeeCCCHHHHHHHHH
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-------W--FPTALVDRYITFDALDPTDTALKLS 77 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~-------~--~~~~~~~~~i~~Dl~d~~~~~~~~~ 77 (211)
+++|++|||||||+||++++++|+ ++|++|++++|++.+. . ....++. ++.+|++|++++.++++
T Consensus 5 ~~~k~vlVTGas~gIG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~-~~~~D~~~~~~v~~~~~ 78 (267)
T 2gdz_A 5 VNGKVALVTGAAQGIGRAFAEALL-----LKGAKVALVDWNLEAGVQCKAALHEQFEPQKTL-FIQCDVADQQQLRDTFR 78 (267)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEE-EEECCTTSHHHHHHHHH
T ss_pred cCCCEEEEECCCCcHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHHHhhcCCCceE-EEecCCCCHHHHHHHHH
Confidence 346899999999999999999999 6899999999975421 0 0124578 89999999998888877
Q ss_pred hccc---ccceEEeecccCC-chhHHHHhhcHHHHHHHHHHHHhcCCC-C-CCceEEEEeecCeee
Q 028258 78 LISQ---EITNLFWVPLQVQ-ESEEVNIFKNSTMLKNVLSVLVSSNSG-R-SRLRHVALLTGTKHY 137 (211)
Q Consensus 78 ~~~~---~~~~v~~~a~~~~-~~~~~~~~~n~~~~~~l~~~~~~~~~~-~-~~~~~~~~~s~~~~y 137 (211)
.+.. .+|++||+|+... .++...+++|+.++.++.+.+...+.. . ....+|+++||...|
T Consensus 79 ~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~ 144 (267)
T 2gdz_A 79 KVVDHFGRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGL 144 (267)
T ss_dssp HHHHHHSCCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGT
T ss_pred HHHHHcCCCCEEEECCCCCChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCcccc
Confidence 6421 2799999998753 467888899988655544444332100 1 114788888886543
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.71 E-value=8.8e-17 Score=129.13 Aligned_cols=163 Identities=13% Similarity=-0.009 Sum_probs=101.2
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
.++|++|||||+|+||++++++|+ ++|++|++++|+..... .....+. ++.+|++|++++.+.++.+
T Consensus 7 ~~~k~vlITGas~giG~~~a~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~ 80 (253)
T 3qiv_A 7 FENKVGIVTGSGGGIGQAYAEALA-----REGAAVVVADINAEAAEAVAKQIVADGGTAI-SVAVDVSDPESAKAMADRT 80 (253)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHHHTTCEEE-EEECCTTSHHHHHHHHHHH
T ss_pred cCCCEEEEECCCChHHHHHHHHHH-----HCCCEEEEEcCCHHHHHHHHHHHHhcCCcEE-EEEccCCCHHHHHHHHHHH
Confidence 357899999999999999999999 68999999999765311 0135678 8999999999888877654
Q ss_pred cc---ccceEEeecccCC------------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCc
Q 028258 80 SQ---EITNLFWVPLQVQ------------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDP 144 (211)
Q Consensus 80 ~~---~~~~v~~~a~~~~------------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~ 144 (211)
.. .+|++||+|+... ..+...+++|+.++.++.+++...+... +..+|+++||...|...
T Consensus 81 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~---- 155 (253)
T 3qiv_A 81 LAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKR-GGGAIVNQSSTAAWLYS---- 155 (253)
T ss_dssp HHHHSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TCEEEEEECC-----------
T ss_pred HHHcCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-CCCEEEEECCccccCCC----
Confidence 21 2899999998621 1345678999999666655553321000 34688888886554210
Q ss_pred cccCCCCCCCCCCcCCCCCCCCCCcchhHHHHHhh-----cCCCceEEEecCCceEecCC
Q 028258 145 SLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 145 ~~~g~~~~~~~~~~e~~~~~~~~~~~~~~e~~l~~-----~~~~~~~~i~Rp~~i~G~~~ 199 (211)
. .....+...+.+.+. ...++.+..++|+.+.++..
T Consensus 156 ----------------~---~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~ 196 (253)
T 3qiv_A 156 ----------------N---YYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEAN 196 (253)
T ss_dssp -----------------------CCHHHHHHHHHHHHHHTTTTTEEEEEEEC--------
T ss_pred ----------------c---hhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccch
Confidence 0 011122222322222 35689999999999998754
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=6e-17 Score=130.78 Aligned_cols=162 Identities=15% Similarity=0.028 Sum_probs=110.7
Q ss_pred CCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 6 QNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 6 ~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
.+.+|++|||||+|+||++++++|+ ++|++|++++|++.+.. .....+. ++.+|++|++++.+.++.
T Consensus 11 ~l~~k~vlVTGas~gIG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~-~~~~D~~~~~~~~~~~~~ 84 (260)
T 2zat_A 11 PLENKVALVTASTDGIGLAIARRLA-----QDGAHVVVSSRKQENVDRTVATLQGEGLSVT-GTVCHVGKAEDRERLVAM 84 (260)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHHHTTCCEE-EEECCTTCHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCceE-EEEccCCCHHHHHHHHHH
Confidence 3457899999999999999999999 68999999999764310 0124577 889999999988777764
Q ss_pred ccc---ccceEEeecccCC----------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCcc
Q 028258 79 ISQ---EITNLFWVPLQVQ----------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPS 145 (211)
Q Consensus 79 ~~~---~~~~v~~~a~~~~----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~ 145 (211)
+.. .+|++||+|+... .++...+++|+.++.++++++...+... +..+|+++||...|..
T Consensus 85 ~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~------ 157 (260)
T 2zat_A 85 AVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKR-GGGSVLIVSSVGAYHP------ 157 (260)
T ss_dssp HHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEECCGGGTSC------
T ss_pred HHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCCEEEEEechhhcCC------
Confidence 321 2899999998532 1355678999999988888765322001 3578899888654421
Q ss_pred ccCCCCCCCCCCcCCCCCCCCCCcchh----HHHHHhh-----cCCCceEEEecCCceEecC
Q 028258 146 LAGQLMPYEVPFKEDSSRLPFPNFYYE----LEDVSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 146 ~~g~~~~~~~~~~e~~~~~~~~~~~~~----~e~~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
. +....|.. .+.+.+. ...++++.+++|+.+..+-
T Consensus 158 ---------------~---~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 201 (260)
T 2zat_A 158 ---------------F---PNLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNF 201 (260)
T ss_dssp ---------------C---TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSST
T ss_pred ---------------C---CCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCcc
Confidence 0 11112222 1222211 3468999999999998763
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.71 E-value=8.9e-17 Score=131.53 Aligned_cols=164 Identities=12% Similarity=0.037 Sum_probs=110.5
Q ss_pred ccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC-C--------CCCCCCceeEEEeeCCCHHHHHH
Q 028258 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP-G--------WFPTALVDRYITFDALDPTDTAL 74 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~-~--------~~~~~~~~~~i~~Dl~d~~~~~~ 74 (211)
|..+++|++|||||+|+||++++++|+ ++|++|++++|+... . ......+. ++.+|++|++++.+
T Consensus 20 ~~~l~~k~~lVTGas~GIG~~ia~~la-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~Dv~d~~~v~~ 93 (281)
T 3v2h_A 20 FQSMMTKTAVITGSTSGIGLAIARTLA-----KAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVL-HHPADMTKPSEIAD 93 (281)
T ss_dssp --CCTTCEEEEETCSSHHHHHHHHHHH-----HTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEE-EECCCTTCHHHHHH
T ss_pred hhccCCCEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEeCCChHHHHHHHHHHhhccCCcEE-EEeCCCCCHHHHHH
Confidence 445567999999999999999999999 699999999985421 0 01135678 89999999998888
Q ss_pred HHHhccc---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccC
Q 028258 75 KLSLISQ---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIF 142 (211)
Q Consensus 75 ~~~~~~~---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~ 142 (211)
+++.+.. .+|++||+|+... .++...+++|+.++.++++++...+. ..+..+|+++||...+..
T Consensus 94 ~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~-~~~~g~iv~isS~~~~~~--- 169 (281)
T 3v2h_A 94 MMAMVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMK-KKGWGRIINIASAHGLVA--- 169 (281)
T ss_dssp HHHHHHHHTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHTCEEEEEECCGGGTSC---
T ss_pred HHHHHHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-HcCCCEEEEECCcccccC---
Confidence 7765421 2899999998732 14556789999999998888743210 013467888887543321
Q ss_pred CccccCCCCCCCCCCcCCCCCCCCCCcchhHHH-----HHhh-----cCCCceEEEecCCceEecCC
Q 028258 143 DPSLAGQLMPYEVPFKEDSSRLPFPNFYYELED-----VSAS-----YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 143 ~~~~~g~~~~~~~~~~e~~~~~~~~~~~~~~e~-----~l~~-----~~~~~~~~i~Rp~~i~G~~~ 199 (211)
. +....|...| +.+. ...++.+..++|+.+.++-.
T Consensus 170 ------------------~----~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~ 214 (281)
T 3v2h_A 170 ------------------S----PFKSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLV 214 (281)
T ss_dssp ------------------C----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC---
T ss_pred ------------------C----CCchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcch
Confidence 0 1111232222 1111 34689999999999988753
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.71 E-value=2e-17 Score=136.01 Aligned_cols=141 Identities=12% Similarity=0.098 Sum_probs=99.3
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC-CC----------CCCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP-GW----------FPTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~-~~----------~~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
++||||||||+||++|+++|+ ++|++|++++|++.. .. +...+++ ++.+|++|++++.+++++
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~-----~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~-~v~~D~~d~~~l~~~~~~ 76 (307)
T 2gas_A 3 NKILILGPTGAIGRHIVWASI-----KAGNPTYALVRKTITAANPETKEELIDNYQSLGVI-LLEGDINDHETLVKAIKQ 76 (307)
T ss_dssp CCEEEESTTSTTHHHHHHHHH-----HHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCE-EEECCTTCHHHHHHHHTT
T ss_pred cEEEEECCCchHHHHHHHHHH-----hCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCE-EEEeCCCCHHHHHHHHhC
Confidence 579999999999999999999 688999999998621 00 0125788 999999999999999886
Q ss_pred cccccceEEeecccCCchhHHHHhhcHHHHHHHHHHHHhcCCCCCC-ceEEEEeecCeeeecccCCccccCCCCCCCCCC
Q 028258 79 ISQEITNLFWVPLQVQESEEVNIFKNSTMLKNVLSVLVSSNSGRSR-LRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPF 157 (211)
Q Consensus 79 ~~~~~~~v~~~a~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~ 157 (211)
+|+|||+++... +.++.++++++++. + +++|++ | .|+.. .
T Consensus 77 ----~d~vi~~a~~~~----------~~~~~~l~~aa~~~-----g~v~~~v~-S---~~g~~----------------~ 117 (307)
T 2gas_A 77 ----VDIVICAAGRLL----------IEDQVKIIKAIKEA-----GNVKKFFP-S---EFGLD----------------V 117 (307)
T ss_dssp ----CSEEEECSSSSC----------GGGHHHHHHHHHHH-----CCCSEEEC-S---CCSSC----------------T
T ss_pred ----CCEEEECCcccc----------cccHHHHHHHHHhc-----CCceEEee-c---ccccC----------------c
Confidence 689999998643 33457899999886 4 788873 2 34321 1
Q ss_pred cCCCCCCCCC-CcchhHHHHHhh---cCCCceEEEecCCceEecC
Q 028258 158 KEDSSRLPFP-NFYYELEDVSAS---YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 158 ~e~~~~~~~~-~~~~~~e~~l~~---~~~~~~~~i~Rp~~i~G~~ 198 (211)
++..+. .| ...| ..|...+ +..+++|+++||+.+++..
T Consensus 118 ~~~~~~--~p~~~~y-~sK~~~e~~~~~~~i~~~~lrp~~~~~~~ 159 (307)
T 2gas_A 118 DRHDAV--EPVRQVF-EEKASIRRVIEAEGVPYTYLCCHAFTGYF 159 (307)
T ss_dssp TSCCCC--TTHHHHH-HHHHHHHHHHHHHTCCBEEEECCEETTTT
T ss_pred ccccCC--CcchhHH-HHHHHHHHHHHHcCCCeEEEEcceeeccc
Confidence 222221 22 2233 2232222 3468999999999998854
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E | Back alignment and structure |
|---|
Probab=99.71 E-value=3.1e-17 Score=131.85 Aligned_cols=130 Identities=16% Similarity=0.092 Sum_probs=96.3
Q ss_pred CccccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC----CCCCCceeEEEeeCCCHHHHHHHH
Q 028258 1 MEKQDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW----FPTALVDRYITFDALDPTDTALKL 76 (211)
Q Consensus 1 ~~~~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~----~~~~~~~~~i~~Dl~d~~~~~~~~ 76 (211)
|..|...++|++|||||+|+||++++++|+ ++|++|++++|++.... ....... .+.+|++|++++.+++
T Consensus 1 M~~~~~l~gk~~lVTGas~gIG~a~a~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~Dv~d~~~v~~~~ 74 (248)
T 3op4_A 1 MSQFMNLEGKVALVTGASRGIGKAIAELLA-----ERGAKVIGTATSESGAQAISDYLGDNGK-GMALNVTNPESIEAVL 74 (248)
T ss_dssp -CCTTCCTTCEEEESSCSSHHHHHHHHHHH-----HTTCEEEEEESSHHHHHHHHHHHGGGEE-EEECCTTCHHHHHHHH
T ss_pred CccccCCCCCEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHhcccce-EEEEeCCCHHHHHHHH
Confidence 666666678999999999999999999999 69999999999765311 0124567 8999999999888887
Q ss_pred Hhccc---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeee
Q 028258 77 SLISQ---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 137 (211)
Q Consensus 77 ~~~~~---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y 137 (211)
+.+.. .+|++||+|+... .++...+++|+.++.++++++...+. ..+..+|+++||...+
T Consensus 75 ~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~-~~~~g~iv~isS~~~~ 146 (248)
T 3op4_A 75 KAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMM-KKRQGRIINVGSVVGT 146 (248)
T ss_dssp HHHHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHTCEEEEEECCHHHH
T ss_pred HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-HcCCCEEEEEcchhhc
Confidence 75421 3899999998642 14566789999999998888754320 0134678888875433
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.71 E-value=3.9e-17 Score=130.31 Aligned_cols=161 Identities=16% Similarity=0.050 Sum_probs=111.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCc-------EEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHH
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPW-------KVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTA 73 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~-------~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~ 73 (211)
++|++|||||||+||++++++|+ +.|+ +|++++|++.... .....++ ++.+|++|++++.
T Consensus 1 ~~k~vlITGasggiG~~la~~l~-----~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~v~ 74 (244)
T 2bd0_A 1 MKHILLITGAGKGIGRAIALEFA-----RAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTD-TITADISDMADVR 74 (244)
T ss_dssp -CEEEEEETTTSHHHHHHHHHHH-----HHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEE-EEECCTTSHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHH-----HhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeee-EEEecCCCHHHHH
Confidence 35789999999999999999999 6888 9999999754311 0134678 8999999999888
Q ss_pred HHHHhccc---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeeccc
Q 028258 74 LKLSLISQ---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPI 141 (211)
Q Consensus 74 ~~~~~~~~---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~ 141 (211)
++++.+.. .+|.|||+|+... .++...+++|+.++.++++++...+. ..+..+|+++||...|..
T Consensus 75 ~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~iv~isS~~~~~~-- 151 (244)
T 2bd0_A 75 RLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALME-RQHSGHIFFITSVAATKA-- 151 (244)
T ss_dssp HHHHHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHTCEEEEEECCGGGTSC--
T ss_pred HHHHHHHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-hCCCCEEEEEecchhcCC--
Confidence 87765421 2899999998632 13556789999999888888754210 013478898888654421
Q ss_pred CCccccCCCCCCCCCCcCCCCCCCCCCcchh----HHHHHhh-----cCCCceEEEecCCceEecCC
Q 028258 142 FDPSLAGQLMPYEVPFKEDSSRLPFPNFYYE----LEDVSAS-----YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 142 ~~~~~~g~~~~~~~~~~e~~~~~~~~~~~~~----~e~~l~~-----~~~~~~~~i~Rp~~i~G~~~ 199 (211)
. +....|.. .+.+... ...+++++++||+.++++..
T Consensus 152 -------------------~---~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~ 196 (244)
T 2bd0_A 152 -------------------F---RHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMW 196 (244)
T ss_dssp -------------------C---TTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTT
T ss_pred -------------------C---CCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhh
Confidence 0 01112222 2222211 35789999999999999754
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=99.70 E-value=1.4e-16 Score=129.43 Aligned_cols=159 Identities=11% Similarity=-0.027 Sum_probs=108.4
Q ss_pred cccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhccc-
Q 028258 3 KQDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQ- 81 (211)
Q Consensus 3 ~~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~- 81 (211)
.|...++|++|||||+|+||++++++|+ ++|++|++++|+.... .... .+.+|++|.+++.+.++.+..
T Consensus 22 ~m~~l~gk~vlVTGas~gIG~aia~~la-----~~G~~V~~~~r~~~~~----~~~~-~~~~Dv~~~~~~~~~~~~~~~~ 91 (266)
T 3uxy_A 22 SMQGFEGKVALVTGAAGGIGGAVVTALR-----AAGARVAVADRAVAGI----AADL-HLPGDLREAAYADGLPGAVAAG 91 (266)
T ss_dssp ----CTTCEEEESSTTSHHHHHHHHHHH-----HTTCEEEECSSCCTTS----CCSE-ECCCCTTSHHHHHHHHHHHHHH
T ss_pred hhhCCCCCEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEeCCHHHH----Hhhh-ccCcCCCCHHHHHHHHHHHHHh
Confidence 3445567999999999999999999999 6899999999986643 2224 668999999887776654321
Q ss_pred --ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCC
Q 028258 82 --EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQL 150 (211)
Q Consensus 82 --~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~ 150 (211)
.+|++||+|+... .++...+++|+.++.++++++...+... +..+|+++||...+..
T Consensus 92 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~iv~isS~~~~~~----------- 159 (266)
T 3uxy_A 92 LGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAA-GGGAIVNVASCWGLRP----------- 159 (266)
T ss_dssp HSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCSBTTBC-----------
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEECCHHhCCC-----------
Confidence 2899999998743 1455677899999999998874321001 3468888887543321
Q ss_pred CCCCCCCcCCCCCCCCCCcchhHHH-----HHhh-----cCCCceEEEecCCceEec
Q 028258 151 MPYEVPFKEDSSRLPFPNFYYELED-----VSAS-----YSPAITYSVHRSSVIIGA 197 (211)
Q Consensus 151 ~~~~~~~~e~~~~~~~~~~~~~~e~-----~l~~-----~~~~~~~~i~Rp~~i~G~ 197 (211)
.+....|...| +.+. ...++.+..++|+.+.++
T Consensus 160 --------------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~ 202 (266)
T 3uxy_A 160 --------------GPGHALYCLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTP 202 (266)
T ss_dssp --------------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCH
T ss_pred --------------CCCChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcch
Confidence 01122232222 1111 346899999999999876
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.70 E-value=2.1e-16 Score=131.96 Aligned_cols=161 Identities=16% Similarity=0.144 Sum_probs=107.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC------------CCCCCceeEEEeeCCCHHHHHHH
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW------------FPTALVDRYITFDALDPTDTALK 75 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~------------~~~~~~~~~i~~Dl~d~~~~~~~ 75 (211)
++|++|||||||+||++++++|+ ++|++|+++.|+..... ....++. ++.+|++|++++.++
T Consensus 4 ~~k~vlVTGas~GIG~aia~~L~-----~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~-~~~~Dvtd~~~v~~~ 77 (324)
T 3u9l_A 4 SKKIILITGASSGFGRLTAEALA-----GAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLR-TLELDVQSQVSVDRA 77 (324)
T ss_dssp -CCEEEESSCSSHHHHHHHHHHH-----HTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEE-EEECCTTCHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHH-----HCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEE-EEEeecCCHHHHHHH
Confidence 46899999999999999999999 69999999999743210 0125678 999999999998888
Q ss_pred HHhccc---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCC
Q 028258 76 LSLISQ---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFD 143 (211)
Q Consensus 76 ~~~~~~---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~ 143 (211)
++.+.. .+|++||+|+... .++...+++|+.++.++++++...+. ..+..+|+++||...+..+
T Consensus 78 ~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~-~~~~g~iV~isS~~~~~~~--- 153 (324)
T 3u9l_A 78 IDQIIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMR-RQKHGLLIWISSSSSAGGT--- 153 (324)
T ss_dssp HHHHHHHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHTCEEEEEECCGGGTSCC---
T ss_pred HHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-hcCCCEEEEEecchhccCC---
Confidence 775421 2899999998632 13456789999999999888843210 0134788888875443210
Q ss_pred ccccCCCCCCCCCCcCCCCCCCCCCcchh----HHHHHhh-----cCCCceEEEecCCceEecC
Q 028258 144 PSLAGQLMPYEVPFKEDSSRLPFPNFYYE----LEDVSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 144 ~~~~g~~~~~~~~~~e~~~~~~~~~~~~~----~e~~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
. +....|.. .+.+... ...|+++++++|+.+.++.
T Consensus 154 -----------------~---~~~~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~ 197 (324)
T 3u9l_A 154 -----------------P---PYLAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGT 197 (324)
T ss_dssp -----------------C---SSCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC----
T ss_pred -----------------C---CcchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCc
Confidence 0 01112322 1222211 3469999999999998654
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.70 E-value=7.5e-17 Score=130.32 Aligned_cols=162 Identities=14% Similarity=0.029 Sum_probs=110.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC--------CCCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG--------WFPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~--------~~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
++|++|||||+|+||++++++|+ ++|++|+++.|+.... .....+++ ++.+|++|++++.++++.+
T Consensus 6 ~~k~vlVTGas~gIG~~~a~~l~-----~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~v~~~~~~~ 79 (264)
T 3i4f_A 6 FVRHALITAGTKGLGKQVTEKLL-----AKGYSVTVTYHSDTTAMETMKETYKDVEERLQ-FVQADVTKKEDLHKIVEEA 79 (264)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHH-----HTTCEEEEEESSCHHHHHHHHHHTGGGGGGEE-EEECCTTSHHHHHHHHHHH
T ss_pred ccCEEEEeCCCchhHHHHHHHHH-----HCCCEEEEEcCCChHHHHHHHHHHHhcCCceE-EEEecCCCHHHHHHHHHHH
Confidence 45899999999999999999999 6899999998875421 00125678 9999999999988887755
Q ss_pred cc---ccceEEeeccc--CC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCcc
Q 028258 80 SQ---EITNLFWVPLQ--VQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPS 145 (211)
Q Consensus 80 ~~---~~~~v~~~a~~--~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~ 145 (211)
.. .+|++||+|+. .. .++...+++|+.++.++++++...+... +..+|+++||...+..+
T Consensus 80 ~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~g~iv~iss~~~~~~~----- 153 (264)
T 3i4f_A 80 MSHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQ-NFGRIINYGFQGADSAP----- 153 (264)
T ss_dssp HHHHSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCTTGGGCC-----
T ss_pred HHHhCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhc-CCCeEEEEeechhcccC-----
Confidence 21 28999999983 11 1345678999999999988874221001 34678888765332110
Q ss_pred ccCCCCCCCCCCcCCCCCCCCCCcchhHHH-----HHhh-----cCCCceEEEecCCceEecCC
Q 028258 146 LAGQLMPYEVPFKEDSSRLPFPNFYYELED-----VSAS-----YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 146 ~~g~~~~~~~~~~e~~~~~~~~~~~~~~e~-----~l~~-----~~~~~~~~i~Rp~~i~G~~~ 199 (211)
+ .++...|...| +.+. ...++++..++|+.++++-.
T Consensus 154 ----------------~--~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~ 199 (264)
T 3i4f_A 154 ----------------G--WIYRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMK 199 (264)
T ss_dssp ----------------C--CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGG
T ss_pred ----------------C--CCCCchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccc
Confidence 0 01112232222 1111 34689999999999998754
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.70 E-value=2.3e-16 Score=128.34 Aligned_cols=160 Identities=8% Similarity=-0.059 Sum_probs=112.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC----CCCCCceeEEEeeCCCHHHHHHHHHhccc--
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW----FPTALVDRYITFDALDPTDTALKLSLISQ-- 81 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~----~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~-- 81 (211)
.+|++|||||+|+||++++++|+ ++|++|++++|+..... ....++. ++.+|++|++++.++++.+..
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~v~~~~~~~~~~~ 83 (271)
T 3tzq_B 10 ENKVAIITGACGGIGLETSRVLA-----RAGARVVLADLPETDLAGAAASVGRGAV-HHVVDLTNEVSVRALIDFTIDTF 83 (271)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEECTTSCHHHHHHHHCTTCE-EEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHH-----HCCCEEEEEcCCHHHHHHHHHHhCCCeE-EEECCCCCHHHHHHHHHHHHHHc
Confidence 46899999999999999999999 68999999999876421 0135678 899999999988887765421
Q ss_pred -ccceEEeecccCC-----------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCC
Q 028258 82 -EITNLFWVPLQVQ-----------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQ 149 (211)
Q Consensus 82 -~~~~v~~~a~~~~-----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~ 149 (211)
.+|++||+|+... ..+...+++|+.++.++++++...+. ..+..+|+++||...+...
T Consensus 84 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~-~~~~g~iv~isS~~~~~~~--------- 153 (271)
T 3tzq_B 84 GRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLI-SAGGGAIVNISSATAHAAY--------- 153 (271)
T ss_dssp SCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-HTTCEEEEEECCGGGTSBC---------
T ss_pred CCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-hcCCCEEEEECCHHHcCCC---------
Confidence 2899999998641 13456789999999999988843220 0134688888875443210
Q ss_pred CCCCCCCCcCCCCCCCCCCcchhHHH-----HHhh-----cCCCceEEEecCCceEecCC
Q 028258 150 LMPYEVPFKEDSSRLPFPNFYYELED-----VSAS-----YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 150 ~~~~~~~~~e~~~~~~~~~~~~~~e~-----~l~~-----~~~~~~~~i~Rp~~i~G~~~ 199 (211)
++...|...| +.+. ...++.+..++|+.+.++..
T Consensus 154 ----------------~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~ 197 (271)
T 3tzq_B 154 ----------------DMSTAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRL 197 (271)
T ss_dssp ----------------SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTT
T ss_pred ----------------CCChHHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccc
Confidence 1112232222 2111 34689999999999998754
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=3.7e-17 Score=133.04 Aligned_cols=158 Identities=10% Similarity=-0.052 Sum_probs=109.2
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeC-CCCCCC-----C---CCCCceeEEEeeCCCH----HHHH
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAAR-RPPPGW-----F---PTALVDRYITFDALDP----TDTA 73 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R-~~~~~~-----~---~~~~~~~~i~~Dl~d~----~~~~ 73 (211)
+++|++|||||+|+||++++++|+ ++|++|++++| ++.... . ....+. ++.+|++|+ +++.
T Consensus 9 ~~~k~~lVTGas~gIG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~ 82 (276)
T 1mxh_A 9 SECPAAVITGGARRIGHSIAVRLH-----QQGFRVVVHYRHSEGAAQRLVAELNAARAGSAV-LCKGDLSLSSSLLDCCE 82 (276)
T ss_dssp --CCEEEETTCSSHHHHHHHHHHH-----HTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEE-EEECCCSSSTTHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEeCCChHHHHHHHHHHHHhcCCceE-EEeccCCCccccHHHHH
Confidence 456899999999999999999999 68999999999 543210 0 034678 899999999 8887
Q ss_pred HHHHhccc---ccceEEeecccCC--------------------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCc-----
Q 028258 74 LKLSLISQ---EITNLFWVPLQVQ--------------------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRL----- 125 (211)
Q Consensus 74 ~~~~~~~~---~~~~v~~~a~~~~--------------------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~----- 125 (211)
++++.+.. .+|++||+|+... ..+...+++|+.++.++++++...+. .+.
T Consensus 83 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~--~~~~~~~~ 160 (276)
T 1mxh_A 83 DIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQG--EGGAWRSR 160 (276)
T ss_dssp HHHHHHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC---------CC
T ss_pred HHHHHHHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHh--cCCCCCCC
Confidence 77765421 2899999998532 23445789999999999999887531 123
Q ss_pred -eEEEEeecCeeeecccCCccccCCCCCCCCCCcCCCCCCCCCCcchhHHH-----HHhh-----cCCCceEEEecCCce
Q 028258 126 -RHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELED-----VSAS-----YSPAITYSVHRSSVI 194 (211)
Q Consensus 126 -~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~~~~~~~~~~~~~e~-----~l~~-----~~~~~~~~i~Rp~~i 194 (211)
.+|+++||...|.. . +....|...| +.+. ...++.+.++||+.+
T Consensus 161 ~g~iv~isS~~~~~~---------------------~----~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v 215 (276)
T 1mxh_A 161 NLSVVNLCDAMTDLP---------------------L----PGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLS 215 (276)
T ss_dssp CEEEEEECCGGGGSC---------------------C----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSB
T ss_pred CcEEEEECchhhcCC---------------------C----CCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcc
Confidence 68888888554321 0 1111232222 1111 345899999999999
Q ss_pred Eec
Q 028258 195 IGA 197 (211)
Q Consensus 195 ~G~ 197 (211)
.++
T Consensus 216 ~t~ 218 (276)
T 1mxh_A 216 LLP 218 (276)
T ss_dssp SCC
T ss_pred cCC
Confidence 987
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.70 E-value=9.3e-17 Score=130.47 Aligned_cols=159 Identities=9% Similarity=-0.038 Sum_probs=110.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC-CCCCCCceeEEEeeCCCHHHHHHHHHhccc---cc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-WFPTALVDRYITFDALDPTDTALKLSLISQ---EI 83 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~-~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~---~~ 83 (211)
|+|++|||||+|+||++++++|+ ++|++|++++|+.... ......+. ++.+|++|++++.++++.+.. .+
T Consensus 15 ~~k~vlVTGas~gIG~aia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~Dv~d~~~v~~~~~~~~~~~g~i 88 (266)
T 3p19_A 15 MKKLVVITGASSGIGEAIARRFS-----EEGHPLLLLARRVERLKALNLPNTL-CAQVDVTDKYTFDTAITRAEKIYGPA 88 (266)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHH-----HTTCCEEEEESCHHHHHTTCCTTEE-EEECCTTCHHHHHHHHHHHHHHHCSE
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-----HCCCEEEEEECCHHHHHHhhcCCce-EEEecCCCHHHHHHHHHHHHHHCCCC
Confidence 57899999999999999999999 6899999999976532 11235778 999999999988887765421 28
Q ss_pred ceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCC
Q 028258 84 TNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYE 154 (211)
Q Consensus 84 ~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~ 154 (211)
|++||+|+... .++...+++|+.++.++++++...+. ..+..+|+++||...+..
T Consensus 89 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~-~~~~g~IV~isS~~~~~~--------------- 152 (266)
T 3p19_A 89 DAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMK-ARNCGTIINISSIAGKKT--------------- 152 (266)
T ss_dssp EEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHTCCEEEEECCGGGTSC---------------
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-hcCCcEEEEEcChhhCCC---------------
Confidence 99999998632 14556789999999887776653210 003468888888544321
Q ss_pred CCCcCCCCCCCCCCcchhHHH-----H---Hhh--cCCCceEEEecCCceEecC
Q 028258 155 VPFKEDSSRLPFPNFYYELED-----V---SAS--YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 155 ~~~~e~~~~~~~~~~~~~~e~-----~---l~~--~~~~~~~~i~Rp~~i~G~~ 198 (211)
. +....|...| + +.. ...++.+..++|+.+..+-
T Consensus 153 ------~----~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~ 196 (266)
T 3p19_A 153 ------F----PDHAAYCGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTEL 196 (266)
T ss_dssp ------C----TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSG
T ss_pred ------C----CCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccch
Confidence 0 1111232222 1 111 3468999999999998764
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=1.2e-16 Score=128.88 Aligned_cols=161 Identities=12% Similarity=-0.006 Sum_probs=107.9
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC----CCCCCceeEEEeeCCCHHHHHHHHHhccc-
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW----FPTALVDRYITFDALDPTDTALKLSLISQ- 81 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~----~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~- 81 (211)
+.+|++|||||||+||++++++|+ ++|++|++++|++.+.. .....+. ++.+|++|++++.++++.+..
T Consensus 3 l~~k~vlVTGas~gIG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~ 76 (254)
T 1hdc_A 3 LSGKTVIITGGARGLGAEAARQAV-----AAGARVVLADVLDEEGAATARELGDAAR-YQHLDVTIEEDWQRVVAYAREE 76 (254)
T ss_dssp CCCSEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHTTGGGEE-EEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHhCCcee-EEEecCCCHHHHHHHHHHHHHH
Confidence 346899999999999999999999 68999999999764311 0124577 889999999988877764421
Q ss_pred --ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCC
Q 028258 82 --EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQL 150 (211)
Q Consensus 82 --~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~ 150 (211)
.+|++||+|+... .++...+++|+.++.++.+++...+... +..+|+++||...+..
T Consensus 77 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~----------- 144 (254)
T 1hdc_A 77 FGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDA-GGGSIVNISSAAGLMG----------- 144 (254)
T ss_dssp HSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTSC-----------
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCCEEEEECchhhccC-----------
Confidence 2899999998632 1355678899988875554443221000 3578899888544321
Q ss_pred CCCCCCCcCCCCCCCCCCcchh----HHHHHhh-----cCCCceEEEecCCceEecC
Q 028258 151 MPYEVPFKEDSSRLPFPNFYYE----LEDVSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 151 ~~~~~~~~e~~~~~~~~~~~~~----~e~~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
. +....|.. .+.+.+. ...++++.++||+.++++.
T Consensus 145 ----------~---~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 188 (254)
T 1hdc_A 145 ----------L---ALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPM 188 (254)
T ss_dssp ----------C---TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred ----------C---CCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCcc
Confidence 0 01112222 1211111 3468999999999999863
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.70 E-value=7.2e-17 Score=130.70 Aligned_cols=125 Identities=12% Similarity=-0.067 Sum_probs=93.0
Q ss_pred ccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC--------CCCCCceeEEEeeCCCHHHHHHH
Q 028258 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW--------FPTALVDRYITFDALDPTDTALK 75 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~--------~~~~~~~~~i~~Dl~d~~~~~~~ 75 (211)
|....+|++|||||+|+||++++++|+ ++|++|++++|++.+.. ....++. ++.+|++|++++.++
T Consensus 5 m~~l~~k~vlVTGas~gIG~aia~~l~-----~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~-~~~~Dv~~~~~v~~~ 78 (262)
T 3pk0_A 5 MFDLQGRSVVVTGGTKGIGRGIATVFA-----RAGANVAVAGRSTADIDACVADLDQLGSGKVI-GVQTDVSDRAQCDAL 78 (262)
T ss_dssp TTCCTTCEEEETTCSSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHHTTSSSCEE-EEECCTTSHHHHHHH
T ss_pred ccCCCCCEEEEECCCcHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEE-EEEcCCCCHHHHHHH
Confidence 445567999999999999999999999 69999999999765310 0125678 999999999988877
Q ss_pred HHhccc---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 76 LSLISQ---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 76 ~~~~~~---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
++.+.. .+|++||+|+... .++...+++|+.++.++++++...+... +..+|+++||..
T Consensus 79 ~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~-~~g~iv~isS~~ 149 (262)
T 3pk0_A 79 AGRAVEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIAS-GSGRVVLTSSIT 149 (262)
T ss_dssp HHHHHHHHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-SSCEEEEECCSB
T ss_pred HHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEEechh
Confidence 765421 2899999998632 1455678999999988888776542101 236788887753
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=99.70 E-value=5.2e-17 Score=131.22 Aligned_cols=161 Identities=11% Similarity=-0.035 Sum_probs=109.4
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----CC----CCCceeEEEeeCCCHHHHHHHHH
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----FP----TALVDRYITFDALDPTDTALKLS 77 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----~~----~~~~~~~i~~Dl~d~~~~~~~~~ 77 (211)
+++|++|||||+|+||++++++|+ ++|++|++++|++.... .. ..+++ ++.+|++|++++.++++
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~v~~~~~ 78 (260)
T 2z1n_A 5 IQGKLAVVTAGSSGLGFASALELA-----RNGARLLLFSRNREKLEAAASRIASLVSGAQVD-IVAGDIREPGDIDRLFE 78 (260)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEE-EEECCTTCHHHHHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEE-EEEccCCCHHHHHHHHH
Confidence 346899999999999999999999 68999999999764311 00 12678 89999999998888876
Q ss_pred hccc--ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccc
Q 028258 78 LISQ--EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSL 146 (211)
Q Consensus 78 ~~~~--~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~ 146 (211)
.+.. .+|++||+|+... .++...+++|+.++.++++++...+... +..+|+++||...|...
T Consensus 79 ~~~~~~gid~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~------ 151 (260)
T 2z1n_A 79 KARDLGGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEK-GWGRMVYIGSVTLLRPW------ 151 (260)
T ss_dssp HHHHTTCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTSCC------
T ss_pred HHHHhcCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEECchhhcCCC------
Confidence 5421 1799999998532 1456678999999877666654321001 35788998886544210
Q ss_pred cCCCCCCCCCCcCCCCCCCCCCcchh----HHHHHhh-----cCCCceEEEecCCceEecC
Q 028258 147 AGQLMPYEVPFKEDSSRLPFPNFYYE----LEDVSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 147 ~g~~~~~~~~~~e~~~~~~~~~~~~~----~e~~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
+....|.. .+.+.+. ...++++.++||+.++++.
T Consensus 152 ------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 194 (260)
T 2z1n_A 152 ------------------QDLALSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDR 194 (260)
T ss_dssp ------------------TTBHHHHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCC
T ss_pred ------------------CCCchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccch
Confidence 01111211 1222111 3468999999999998874
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} | Back alignment and structure |
|---|
Probab=99.70 E-value=5.4e-17 Score=135.20 Aligned_cols=162 Identities=13% Similarity=-0.001 Sum_probs=111.3
Q ss_pred CCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC---------CCCCCceeEEEeeCCCHHHHHHHH
Q 028258 6 QNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW---------FPTALVDRYITFDALDPTDTALKL 76 (211)
Q Consensus 6 ~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~---------~~~~~~~~~i~~Dl~d~~~~~~~~ 76 (211)
..++|++|||||||+||++++++|+ ++|++|++++|+..+.. .....+. ++.+|++|++++.+++
T Consensus 5 ~l~~k~vlVTGas~gIG~~la~~l~-----~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~-~~~~Dl~~~~~v~~~~ 78 (319)
T 3ioy_A 5 DFAGRTAFVTGGANGVGIGLVRQLL-----NQGCKVAIADIRQDSIDKALATLEAEGSGPEVM-GVQLDVASREGFKMAA 78 (319)
T ss_dssp CCTTCEEEEETTTSTHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEE-EEECCTTCHHHHHHHH
T ss_pred CCCCCEEEEcCCchHHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEE-EEECCCCCHHHHHHHH
Confidence 3457899999999999999999999 68999999999865311 0112678 8999999999988887
Q ss_pred Hhccc---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCC-----CCCceEEEEeecCeeeec
Q 028258 77 SLISQ---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSG-----RSRLRHVALLTGTKHYMG 139 (211)
Q Consensus 77 ~~~~~---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~-----~~~~~~~~~~s~~~~y~~ 139 (211)
+.+.. .+|++||+|+... .++...+++|+.++.++++++...+.. ..+-.+|+++||...+..
T Consensus 79 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~ 158 (319)
T 3ioy_A 79 DEVEARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLA 158 (319)
T ss_dssp HHHHHHTCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCC
T ss_pred HHHHHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccC
Confidence 76521 2899999998632 245567899999999998887765200 012346888887554321
Q ss_pred ccCCccccCCCCCCCCCCcCCCCCCCCCCcchhHHHH----Hhh------cCCCceEEEecCCceEecC
Q 028258 140 PIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDV----SAS------YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 140 ~~~~~~~~g~~~~~~~~~~e~~~~~~~~~~~~~~e~~----l~~------~~~~~~~~i~Rp~~i~G~~ 198 (211)
. +. ...|...|. +.+ ...++.+++++|+.|.++-
T Consensus 159 ~------------------------~~-~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~ 202 (319)
T 3ioy_A 159 A------------------------GS-PGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYI 202 (319)
T ss_dssp C------------------------SS-SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC---
T ss_pred C------------------------CC-CHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCc
Confidence 0 11 112332222 111 3468999999999998764
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} | Back alignment and structure |
|---|
Probab=99.70 E-value=6.9e-17 Score=130.71 Aligned_cols=164 Identities=12% Similarity=-0.035 Sum_probs=110.7
Q ss_pred cccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHH
Q 028258 3 KQDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALK 75 (211)
Q Consensus 3 ~~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~ 75 (211)
+|..+.+|++|||||+|+||++++++|+ ++|++|++++|+..... .....++ ++.+|++|++++.++
T Consensus 23 ~m~~l~~k~vlITGas~gIG~~la~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~v~~~ 96 (262)
T 3rkr_A 23 HMSSLSGQVAVVTGASRGIGAAIARKLG-----SLGARVVLTARDVEKLRAVEREIVAAGGEAE-SHACDLSHSDAIAAF 96 (262)
T ss_dssp --CTTTTCEEEESSTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHHHTTCEEE-EEECCTTCHHHHHHH
T ss_pred hhhccCCCEEEEECCCChHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHHHHhCCcee-EEEecCCCHHHHHHH
Confidence 4666667999999999999999999999 68999999999865311 0135678 899999999998888
Q ss_pred HHhccc---ccceEEeecccC-C---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccC
Q 028258 76 LSLISQ---EITNLFWVPLQV-Q---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIF 142 (211)
Q Consensus 76 ~~~~~~---~~~~v~~~a~~~-~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~ 142 (211)
++.+.. .+|++||+|+.. . .++...+++|+.++.++++++...+. ..+..+|+++||...+..
T Consensus 97 ~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~-~~~~g~iv~isS~~~~~~--- 172 (262)
T 3rkr_A 97 ATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMI-AAKRGHIINISSLAGKNP--- 172 (262)
T ss_dssp HHHHHHHHSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HTTCCEEEEECSSCSSCC---
T ss_pred HHHHHHhcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-hCCCceEEEEechhhcCC---
Confidence 766421 289999999862 1 13456789999998888887654320 013468888887544321
Q ss_pred CccccCCCCCCCCCCcCCCCCCCCCCcchhHHH-----HHhh-----cCCCceEEEecCCceEecC
Q 028258 143 DPSLAGQLMPYEVPFKEDSSRLPFPNFYYELED-----VSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 143 ~~~~~g~~~~~~~~~~e~~~~~~~~~~~~~~e~-----~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
.+....|...| +.+. ...++++..++|+.+..+-
T Consensus 173 ----------------------~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~ 216 (262)
T 3rkr_A 173 ----------------------VADGAAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEF 216 (262)
T ss_dssp ----------------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----
T ss_pred ----------------------CCCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCc
Confidence 01112232222 2111 3468999999999997654
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=2e-16 Score=130.10 Aligned_cols=157 Identities=13% Similarity=-0.064 Sum_probs=112.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC--------CCCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG--------WFPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~--------~~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
.+|++|||||+|+||++++++|+ ++|++|++++|+.... ......+. ++.+|++|++++.++++.+
T Consensus 46 ~gk~vlVTGas~GIG~aia~~la-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~Dv~d~~~v~~~~~~~ 119 (291)
T 3ijr_A 46 KGKNVLITGGDSGIGRAVSIAFA-----KEGANIAIAYLDEEGDANETKQYVEKEGVKCV-LLPGDLSDEQHCKDIVQET 119 (291)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESSCHHHHHHHHHHHHTTTCCEE-EEESCTTSHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEeCCchHHHHHHHHHHHhcCCcEE-EEECCCCCHHHHHHHHHHH
Confidence 46899999999999999999999 6899999999976421 01235678 8999999999888777654
Q ss_pred cc---ccceEEeecccCC----------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccc
Q 028258 80 SQ---EITNLFWVPLQVQ----------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSL 146 (211)
Q Consensus 80 ~~---~~~~v~~~a~~~~----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~ 146 (211)
.. .+|++||+|+... .++...+++|+.++.++++++...+ .+-.+|+++||...|...
T Consensus 120 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~---~~~g~iv~isS~~~~~~~------ 190 (291)
T 3ijr_A 120 VRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHL---KQGDVIINTASIVAYEGN------ 190 (291)
T ss_dssp HHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTC---CTTCEEEEECCTHHHHCC------
T ss_pred HHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH---hhCCEEEEEechHhcCCC------
Confidence 21 2899999987532 1355678999999999999998763 123578888886655310
Q ss_pred cCCCCCCCCCCcCCCCCCCCCCcchh----HHHHHhh-----cCCCceEEEecCCceEec
Q 028258 147 AGQLMPYEVPFKEDSSRLPFPNFYYE----LEDVSAS-----YSPAITYSVHRSSVIIGA 197 (211)
Q Consensus 147 ~g~~~~~~~~~~e~~~~~~~~~~~~~----~e~~l~~-----~~~~~~~~i~Rp~~i~G~ 197 (211)
+....|.. .+.+.+. ...++.+..++|+.+.++
T Consensus 191 ------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~ 232 (291)
T 3ijr_A 191 ------------------ETLIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTP 232 (291)
T ss_dssp ------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCST
T ss_pred ------------------CCChhHHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCC
Confidence 01112222 1211111 346899999999999876
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.70 E-value=2.4e-17 Score=134.19 Aligned_cols=165 Identities=10% Similarity=0.008 Sum_probs=111.2
Q ss_pred CccccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC---CCCCCceeEEEeeCCCHHHHHHHHH
Q 028258 1 MEKQDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW---FPTALVDRYITFDALDPTDTALKLS 77 (211)
Q Consensus 1 ~~~~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~---~~~~~~~~~i~~Dl~d~~~~~~~~~ 77 (211)
|..+..+++|++|||||+|+||++++++|+ ++|++|++++|++.... ....++. ++.+|++|++++.++++
T Consensus 1 M~~~~~l~~k~vlVTGas~gIG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~Dv~d~~~v~~~~~ 74 (270)
T 1yde_A 1 MATGTRYAGKVVVVTGGGRGIGAGIVRAFV-----NSGARVVICDKDESGGRALEQELPGAV-FILCDVTQEDDVKTLVS 74 (270)
T ss_dssp ---CCTTTTCEEEEETCSSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHCTTEE-EEECCTTSHHHHHHHHH
T ss_pred CCCCCCCCCCEEEEECCCcHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHhcCCe-EEEcCCCCHHHHHHHHH
Confidence 434444567899999999999999999999 68999999999764311 0113478 89999999998888776
Q ss_pred hccc---ccceEEeecccCC----------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCc
Q 028258 78 LISQ---EITNLFWVPLQVQ----------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDP 144 (211)
Q Consensus 78 ~~~~---~~~~v~~~a~~~~----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~ 144 (211)
.+.. .+|++||+|+... .++...+++|+.++.++++++...+. .+..+|+++||...+.+.
T Consensus 75 ~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~--~~~g~iv~isS~~~~~~~---- 148 (270)
T 1yde_A 75 ETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLR--KSQGNVINISSLVGAIGQ---- 148 (270)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH--HHTCEEEEECCHHHHHCC----
T ss_pred HHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH--HCCCEEEEEcCccccCCC----
Confidence 5421 2899999998632 13456789999999999888865320 013678888875332110
Q ss_pred cccCCCCCCCCCCcCCCCCCCCCCcchh----HHHHHhh-----cCCCceEEEecCCceEec
Q 028258 145 SLAGQLMPYEVPFKEDSSRLPFPNFYYE----LEDVSAS-----YSPAITYSVHRSSVIIGA 197 (211)
Q Consensus 145 ~~~g~~~~~~~~~~e~~~~~~~~~~~~~----~e~~l~~-----~~~~~~~~i~Rp~~i~G~ 197 (211)
+....|.. .+.+.+. ...++++.++||+.++++
T Consensus 149 --------------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~ 190 (270)
T 1yde_A 149 --------------------AQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTP 190 (270)
T ss_dssp --------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCH
T ss_pred --------------------CCCcccHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccc
Confidence 00111222 1212111 346899999999999986
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.70 E-value=6.7e-17 Score=131.08 Aligned_cols=164 Identities=10% Similarity=-0.084 Sum_probs=113.9
Q ss_pred cCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC----CCCCCceeEEEeeCCCHHHHHHHHHhcc
Q 028258 5 DQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW----FPTALVDRYITFDALDPTDTALKLSLIS 80 (211)
Q Consensus 5 ~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~----~~~~~~~~~i~~Dl~d~~~~~~~~~~~~ 80 (211)
..+.+|++|||||||+||++++++|+ ++|++|++++|+++... ....++. ++.+|++|++++.++++.+.
T Consensus 2 ~~l~~k~vlITGas~gIG~aia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~D~~~~~~v~~~~~~~~ 75 (263)
T 2a4k_A 2 GRLSGKTILVTGAASGIGRAALDLFA-----REGASLVAVDREERLLAEAVAALEAEAI-AVVADVSDPKAVEAVFAEAL 75 (263)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHTCCSSEE-EEECCTTSHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHhcCceE-EEEcCCCCHHHHHHHHHHHH
Confidence 34456899999999999999999999 68999999999864310 0124678 89999999998888776542
Q ss_pred c---ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccC
Q 028258 81 Q---EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAG 148 (211)
Q Consensus 81 ~---~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g 148 (211)
. .+|++||+|+.... ++...+++|+.++.++++++...+ . +..+|+++||...|+.+.. ..|+
T Consensus 76 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~-~--~~g~iv~isS~~~~~~~~~--~~Y~ 150 (263)
T 2a4k_A 76 EEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVL-E--EGGSLVLTGSVAGLGAFGL--AHYA 150 (263)
T ss_dssp HHHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHC-C--TTCEEEEECCCTTCCHHHH--HHHH
T ss_pred HHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH-h--cCCEEEEEecchhcCCCCc--HHHH
Confidence 1 28999999986421 345677999999999999988763 1 1358888888655421100 0000
Q ss_pred CCCCCCCCCcCCCCCCCCCCcchhHHHH---Hh-h-cCCCceEEEecCCceEecC
Q 028258 149 QLMPYEVPFKEDSSRLPFPNFYYELEDV---SA-S-YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 149 ~~~~~~~~~~e~~~~~~~~~~~~~~e~~---l~-~-~~~~~~~~i~Rp~~i~G~~ 198 (211)
..+...+.+ +. + ...++++.++||+.+.++-
T Consensus 151 -------------------asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 186 (263)
T 2a4k_A 151 -------------------AGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPM 186 (263)
T ss_dssp -------------------HCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGG
T ss_pred -------------------HHHHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCch
Confidence 011111212 11 1 4578999999999998874
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A | Back alignment and structure |
|---|
Probab=99.70 E-value=2.1e-16 Score=127.29 Aligned_cols=160 Identities=13% Similarity=0.038 Sum_probs=107.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----CCCCCceeEEEeeCCCHHHHHHHHHhccc-
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----FPTALVDRYITFDALDPTDTALKLSLISQ- 81 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~- 81 (211)
.+|++|||||+|+||++++++|+ ++|++|++++|++.... ....++. ++.+|++|++++.++++.+..
T Consensus 3 ~~k~vlVTGas~giG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~l~~~~~~~~-~~~~D~~~~~~v~~~~~~~~~~ 76 (255)
T 2q2v_A 3 KGKTALVTGSTSGIGLGIAQVLA-----RAGANIVLNGFGDPAPALAEIARHGVKAV-HHPADLSDVAQIEALFALAERE 76 (255)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHH-----HTTCEEEEECSSCCHHHHHHHHTTSCCEE-EECCCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEeCCchHHHHHHHHhcCCceE-EEeCCCCCHHHHHHHHHHHHHH
Confidence 46899999999999999999999 68999999999765210 0134577 889999999988888764421
Q ss_pred --ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCC
Q 028258 82 --EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQL 150 (211)
Q Consensus 82 --~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~ 150 (211)
.+|++||+|+... .++...+++|+.++.++.+++...+. ..+..+|+++||...+..
T Consensus 77 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~-~~~~g~iv~isS~~~~~~----------- 144 (255)
T 2q2v_A 77 FGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMR-ARNWGRIINIASVHGLVG----------- 144 (255)
T ss_dssp HSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HTTCEEEEEECCGGGTSC-----------
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-HcCCcEEEEEcCchhccC-----------
Confidence 2899999998632 13456788999876666655532210 013578899888644321
Q ss_pred CCCCCCCcCCCCCCCCCCcchh----HHHHHh---h--cCCCceEEEecCCceEecC
Q 028258 151 MPYEVPFKEDSSRLPFPNFYYE----LEDVSA---S--YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 151 ~~~~~~~~e~~~~~~~~~~~~~----~e~~l~---~--~~~~~~~~i~Rp~~i~G~~ 198 (211)
. +....|.. .+.+.+ . ...++++.++||+.++++.
T Consensus 145 ----------~---~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 188 (255)
T 2q2v_A 145 ----------S---TGKAAYVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPL 188 (255)
T ss_dssp ----------C---TTBHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHH
T ss_pred ----------C---CCchhHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcc
Confidence 0 01112222 111111 1 3468999999999998863
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.70 E-value=6.5e-17 Score=131.86 Aligned_cols=122 Identities=16% Similarity=0.024 Sum_probs=89.3
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC---------CCCCCceeEEEeeCCCHHHHHHHHH
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW---------FPTALVDRYITFDALDPTDTALKLS 77 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~---------~~~~~~~~~i~~Dl~d~~~~~~~~~ 77 (211)
+.+|++|||||+|+||++++++|+ +.|++|++++|++.... .....+. ++.+|++|++++.++++
T Consensus 30 l~~k~vlVTGasggIG~~la~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~v~~~~~ 103 (279)
T 1xg5_A 30 WRDRLALVTGASGGIGAAVARALV-----QQGLKVVGCARTVGNIEELAAECKSAGYPGTLI-PYRCDLSNEEDILSMFS 103 (279)
T ss_dssp GTTCEEEEESTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEE-EEECCTTCHHHHHHHHH
T ss_pred cCCCEEEEECCCchHHHHHHHHHH-----HCCCEEEEEECChHHHHHHHHHHHhcCCCceEE-EEEecCCCHHHHHHHHH
Confidence 456899999999999999999999 68999999999754210 0113577 88999999998888776
Q ss_pred hccc---ccceEEeecccCC---------chhHHHHhhcHHH----HHHHHHHHHhcCCCCCCceEEEEeecCeee
Q 028258 78 LISQ---EITNLFWVPLQVQ---------ESEEVNIFKNSTM----LKNVLSVLVSSNSGRSRLRHVALLTGTKHY 137 (211)
Q Consensus 78 ~~~~---~~~~v~~~a~~~~---------~~~~~~~~~n~~~----~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y 137 (211)
.+.. .+|+|||+|+... .++...+++|+.+ ++.+++.+++. ...-.+|+++||...+
T Consensus 104 ~~~~~~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~---~~~~g~iv~isS~~~~ 176 (279)
T 1xg5_A 104 AIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKER---NVDDGHIININSMSGH 176 (279)
T ss_dssp HHHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT---TCCSCEEEEECCGGGT
T ss_pred HHHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc---CCCCceEEEEcChhhc
Confidence 5421 2899999998532 1355678899988 66666666654 1112688888875443
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.70 E-value=8.8e-17 Score=130.36 Aligned_cols=123 Identities=15% Similarity=-0.051 Sum_probs=88.7
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC---------CCCCCceeEEEeeCCCHHHHHHHHH
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW---------FPTALVDRYITFDALDPTDTALKLS 77 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~---------~~~~~~~~~i~~Dl~d~~~~~~~~~ 77 (211)
+.+|++|||||+|+||++++++|+ ++|++|++++|++.+.. ....++. ++.+|++|++++.++++
T Consensus 11 l~~k~vlVTGas~gIG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~v~~~~~ 84 (267)
T 1iy8_A 11 FTDRVVLITGGGSGLGRATAVRLA-----AEGAKLSLVDVSSEGLEASKAAVLETAPDAEVL-TTVADVSDEAQVEAYVT 84 (267)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEE-EEECCTTSHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEE-EEEccCCCHHHHHHHHH
Confidence 457899999999999999999999 68999999999764311 0034678 89999999998888776
Q ss_pred hccc---ccceEEeecccCC----------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCee
Q 028258 78 LISQ---EITNLFWVPLQVQ----------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKH 136 (211)
Q Consensus 78 ~~~~---~~~~v~~~a~~~~----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~ 136 (211)
.+.. .+|++||+|+... .++...+++|+.++.++++++...+... +..+|+++||...
T Consensus 85 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~ 155 (267)
T 1iy8_A 85 ATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQ-GSGMVVNTASVGG 155 (267)
T ss_dssp HHHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEECCGGG
T ss_pred HHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCCEEEEEcchhh
Confidence 5421 2899999998532 1355677899988776655543321000 3468888887543
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.70 E-value=1.3e-16 Score=130.33 Aligned_cols=130 Identities=13% Similarity=-0.003 Sum_probs=93.5
Q ss_pred ccccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC------CCCCCceeEEEeeCCCHHHHHHH
Q 028258 2 EKQDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW------FPTALVDRYITFDALDPTDTALK 75 (211)
Q Consensus 2 ~~~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~ 75 (211)
.+|..+++|++|||||+|+||++++++|+ ++|++|++++|++.... ....++. ++.+|++|++++.++
T Consensus 22 ~~~~~l~~k~vlVTGas~gIG~aia~~L~-----~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~-~~~~Dv~d~~~v~~~ 95 (276)
T 2b4q_A 22 HPYFSLAGRIALVTGGSRGIGQMIAQGLL-----EAGARVFICARDAEACADTATRLSAYGDCQ-AIPADLSSEAGARRL 95 (276)
T ss_dssp CTTTCCTTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEECSCHHHHHHHHHHHTTSSCEE-ECCCCTTSHHHHHHH
T ss_pred ccccCCCCCEEEEeCCCChHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCceE-EEEeeCCCHHHHHHH
Confidence 34444457899999999999999999999 68999999999764310 0112677 889999999988887
Q ss_pred HHhccc---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcC---CCCCCceEEEEeecCeee
Q 028258 76 LSLISQ---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSN---SGRSRLRHVALLTGTKHY 137 (211)
Q Consensus 76 ~~~~~~---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~~~~~~~~s~~~~y 137 (211)
++.+.. .+|++||+|+... .++...+++|+.++.++++++...+ +...+..+|+++||...|
T Consensus 96 ~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~ 172 (276)
T 2b4q_A 96 AQALGELSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGI 172 (276)
T ss_dssp HHHHHHHCSCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGT
T ss_pred HHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHc
Confidence 765421 3899999998532 2456778999999877777665432 000123788998886543
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=3.4e-16 Score=125.05 Aligned_cols=118 Identities=8% Similarity=-0.001 Sum_probs=90.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcc-----cc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLIS-----QE 82 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~-----~~ 82 (211)
++|++|||||+|+||++++++|+ ++|++|++++|++.... .... ++.+|++|++++.+.++.+. ..
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~-----~~G~~V~~~~r~~~~~~---~~~~-~~~~D~~~~~~v~~~~~~~~~~~~~g~ 76 (241)
T 1dhr_A 6 EARRVLVYGGRGALGSRCVQAFR-----ARNWWVASIDVVENEEA---SASV-IVKMTDSFTEQADQVTAEVGKLLGDQK 76 (241)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHH-----TTTCEEEEEESSCCTTS---SEEE-ECCCCSCHHHHHHHHHHHHHHHHTTCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHH-----hCCCEEEEEeCChhhcc---CCcE-EEEcCCCCHHHHHHHHHHHHHHhCCCC
Confidence 35899999999999999999999 68999999999876532 3456 78899999998887776431 12
Q ss_pred cceEEeecccCC----------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeee
Q 028258 83 ITNLFWVPLQVQ----------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 137 (211)
Q Consensus 83 ~~~v~~~a~~~~----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y 137 (211)
+|++||+|+... .++...+++|+.++.++++++...+. +-.+|+++||...+
T Consensus 77 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~---~~g~iv~isS~~~~ 138 (241)
T 1dhr_A 77 VDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLK---EGGLLTLAGAKAAL 138 (241)
T ss_dssp EEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEE---EEEEEEEECCGGGG
T ss_pred CCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhc---cCCEEEEECCHHHc
Confidence 899999998532 13455678999999999998876521 12578888875443
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.70 E-value=4.2e-17 Score=131.33 Aligned_cols=124 Identities=14% Similarity=0.055 Sum_probs=90.6
Q ss_pred CCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCC----CCCCceeEEEeeCCCHHHHHHHHHhccc
Q 028258 6 QNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF----PTALVDRYITFDALDPTDTALKLSLISQ 81 (211)
Q Consensus 6 ~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~----~~~~~~~~i~~Dl~d~~~~~~~~~~~~~ 81 (211)
.+++|++|||||+|+||++++++|+ ++|++|++++|++..... ...++. ++.+|++|++++.++++.+..
T Consensus 3 ~l~~k~vlVTGas~giG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~D~~~~~~v~~~~~~~~~ 76 (253)
T 1hxh_A 3 RLQGKVALVTGGASGVGLEVVKLLL-----GEGAKVAFSDINEAAGQQLAAELGERSM-FVRHDVSSEADWTLVMAAVQR 76 (253)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHH-----HTTCEEEEECSCHHHHHHHHHHHCTTEE-EECCCTTCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHcCCceE-EEEccCCCHHHHHHHHHHHHH
Confidence 3456899999999999999999999 689999999997543110 024678 899999999988887766421
Q ss_pred ---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeee
Q 028258 82 ---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 137 (211)
Q Consensus 82 ---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y 137 (211)
.+|++||+|+... .++...+++|+.++.++.+++...+... + .+|+++||...|
T Consensus 77 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-~-g~iv~isS~~~~ 142 (253)
T 1hxh_A 77 RLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKET-G-GSIINMASVSSW 142 (253)
T ss_dssp HHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT-C-EEEEEECCGGGT
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHc-C-CEEEEEcchhhc
Confidence 2799999998632 1355678899887776666554432112 3 788998886443
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.69 E-value=1.3e-16 Score=129.85 Aligned_cols=161 Identities=16% Similarity=0.106 Sum_probs=108.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHhcc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSLIS 80 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~ 80 (211)
.+|++|||||+|+||++++++|+ ++|++|++++|++.... ....++. ++.+|++|++++.++++.+.
T Consensus 20 ~~k~vlVTGas~gIG~aia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~ 93 (273)
T 1ae1_A 20 KGTTALVTGGSKGIGYAIVEELA-----GLGARVYTCSRNEKELDECLEIWREKGLNVE-GSVCDLLSRTERDKLMQTVA 93 (273)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHHHTTCCEE-EEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCcchHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCceE-EEECCCCCHHHHHHHHHHHH
Confidence 46899999999999999999999 68999999999764311 0134678 89999999998877775431
Q ss_pred ----cccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCcccc
Q 028258 81 ----QEITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLA 147 (211)
Q Consensus 81 ----~~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~ 147 (211)
..+|++||+|+... .++...+++|+.++.++++++...+... +..+|+++||...|..
T Consensus 94 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~-~~g~iv~isS~~~~~~-------- 164 (273)
T 1ae1_A 94 HVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKAS-QNGNVIFLSSIAGFSA-------- 164 (273)
T ss_dssp HHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TSEEEEEECCGGGTSC--------
T ss_pred HHcCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEEcCHhhcCC--------
Confidence 13899999998632 1455677899999999888775321001 3478898888654421
Q ss_pred CCCCCCCCCCcCCCCCCCCCCcchhH----HHHHhh-----cCCCceEEEecCCceEecCC
Q 028258 148 GQLMPYEVPFKEDSSRLPFPNFYYEL----EDVSAS-----YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 148 g~~~~~~~~~~e~~~~~~~~~~~~~~----e~~l~~-----~~~~~~~~i~Rp~~i~G~~~ 199 (211)
. +....|... +.+.+. ...++++..+||+.++++..
T Consensus 165 -------------~---~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~ 209 (273)
T 1ae1_A 165 -------------L---PSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLV 209 (273)
T ss_dssp -------------C---TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC----
T ss_pred -------------C---CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchh
Confidence 0 111122221 211111 34689999999999998753
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A | Back alignment and structure |
|---|
Probab=99.69 E-value=6.4e-16 Score=124.00 Aligned_cols=118 Identities=17% Similarity=0.079 Sum_probs=90.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhccc---ccc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQ---EIT 84 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~---~~~ 84 (211)
++|++|||||+|+||++++++|+ ++|++|++++|++.+. ..+. .+.+|++|++++.++++.+.. .+|
T Consensus 14 ~~k~vlVTGas~gIG~~ia~~l~-----~~G~~V~~~~r~~~~~----~~~~-~~~~D~~~~~~~~~~~~~~~~~~g~id 83 (247)
T 1uzm_A 14 VSRSVLVTGGNRGIGLAIAQRLA-----ADGHKVAVTHRGSGAP----KGLF-GVEVDVTDSDAVDRAFTAVEEHQGPVE 83 (247)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHH-----HTTCEEEEEESSSCCC----TTSE-EEECCTTCHHHHHHHHHHHHHHHSSCS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEeCChHHH----HHhc-CeeccCCCHHHHHHHHHHHHHHcCCCC
Confidence 46899999999999999999999 6899999999986643 3344 578999999988887765421 289
Q ss_pred eEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCee
Q 028258 85 NLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKH 136 (211)
Q Consensus 85 ~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~ 136 (211)
++||+|+... .++...+++|+.++.++++++...+. ..+..+|+++||...
T Consensus 84 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-~~~~g~iv~isS~~~ 143 (247)
T 1uzm_A 84 VLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQ-RNKFGRMIFIGSVSG 143 (247)
T ss_dssp EEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HTTCEEEEEECCCCC
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-hCCCCEEEEECCHhh
Confidence 9999998642 14566789999999898887764321 013578888888543
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.69 E-value=2.1e-16 Score=127.92 Aligned_cols=164 Identities=8% Similarity=-0.064 Sum_probs=112.4
Q ss_pred ccCCCCCeEEEEcCCC-hHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC--------CCCCCCceeEEEeeCCCHHHHHH
Q 028258 4 QDQNPKSVALIIGVTG-ISGLSLAEALKNPTTPGSPWKVYGAARRPPPG--------WFPTALVDRYITFDALDPTDTAL 74 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG-~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~--------~~~~~~~~~~i~~Dl~d~~~~~~ 74 (211)
|..+.+|++|||||+| .||++++++|+ ++|++|++++|+.... .....+++ ++.+|++|++++.+
T Consensus 17 ~~~l~~k~vlITGasg~GIG~~~a~~l~-----~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~-~~~~Dl~~~~~v~~ 90 (266)
T 3o38_A 17 HGLLKGKVVLVTAAAGTGIGSTTARRAL-----LEGADVVISDYHERRLGETRDQLADLGLGRVE-AVVCDVTSTEAVDA 90 (266)
T ss_dssp CSTTTTCEEEESSCSSSSHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHHTTCSSCEE-EEECCTTCHHHHHH
T ss_pred ccCCCCCEEEEECCCCCchHHHHHHHHH-----HCCCEEEEecCCHHHHHHHHHHHHhcCCCceE-EEEeCCCCHHHHHH
Confidence 3445578999999997 69999999999 6899999999976431 11235788 99999999998888
Q ss_pred HHHhccc---ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccC
Q 028258 75 KLSLISQ---EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIF 142 (211)
Q Consensus 75 ~~~~~~~---~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~ 142 (211)
+++.+.. .+|++||+|+.... ++...+++|+.++.++++++...+....+..+|+++||...+..
T Consensus 91 ~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~--- 167 (266)
T 3o38_A 91 LITQTVEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRA--- 167 (266)
T ss_dssp HHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCC---
T ss_pred HHHHHHHHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCC---
Confidence 8766521 28999999986321 35567899999999988887654311223467888877543210
Q ss_pred CccccCCCCCCCCCCcCCCCCCCCCCcchhHHH-----HHhh-----cCCCceEEEecCCceEecC
Q 028258 143 DPSLAGQLMPYEVPFKEDSSRLPFPNFYYELED-----VSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 143 ~~~~~g~~~~~~~~~~e~~~~~~~~~~~~~~e~-----~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
.++...|...| +.+. ...++.+..++|+.+..+-
T Consensus 168 ----------------------~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 211 (266)
T 3o38_A 168 ----------------------QHSQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKF 211 (266)
T ss_dssp ----------------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC--
T ss_pred ----------------------CCCCchHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchh
Confidence 01122233222 1111 3468999999999998764
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.69 E-value=1.2e-16 Score=130.50 Aligned_cols=162 Identities=9% Similarity=-0.025 Sum_probs=111.8
Q ss_pred cCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCC---CceeEEEeeCCCHHHHHH
Q 028258 5 DQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTA---LVDRYITFDALDPTDTAL 74 (211)
Q Consensus 5 ~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~---~~~~~i~~Dl~d~~~~~~ 74 (211)
..+++|++|||||+|+||++++++|+ ++|++|++++|++.... .... ++. ++.+|++|++++.+
T Consensus 2 ~~l~~k~vlVTGas~gIG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~v~~ 75 (280)
T 1xkq_A 2 PRFSNKTVIITGSSNGIGRTTAILFA-----QEGANVTITGRSSERLEETRQIILKSGVSEKQVN-SVVADVTTEDGQDQ 75 (280)
T ss_dssp CTTTTCEEEETTCSSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEE-EEECCTTSHHHHHH
T ss_pred CCCCCCEEEEECCCChHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceE-EEEecCCCHHHHHH
Confidence 34557899999999999999999999 68999999999764310 0112 678 89999999998887
Q ss_pred HHHhccc---ccceEEeecccCCc-------------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeee
Q 028258 75 KLSLISQ---EITNLFWVPLQVQE-------------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYM 138 (211)
Q Consensus 75 ~~~~~~~---~~~~v~~~a~~~~~-------------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~ 138 (211)
+++.+.. .+|++||+|+.... .+...+++|+.++.++++++...+... + .+|+++||...+.
T Consensus 76 ~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~-g~iv~isS~~~~~ 153 (280)
T 1xkq_A 76 IINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVAS-K-GEIVNVSSIVAGP 153 (280)
T ss_dssp HHHHHHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-T-CEEEEECCGGGSS
T ss_pred HHHHHHHhcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcC-C-CcEEEecCccccC
Confidence 7765421 28999999985321 345677999999999888877542101 2 6888888754432
Q ss_pred cccCCccccCCCCCCCCCCcCCCCCCCCCCcchhHHH-----HHhh-----cCCCceEEEecCCceEecC
Q 028258 139 GPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELED-----VSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 139 ~~~~~~~~~g~~~~~~~~~~e~~~~~~~~~~~~~~e~-----~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
.. . ++...|...| +.+. ...++++..++|+.+.++.
T Consensus 154 ~~--------------------~----~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 199 (280)
T 1xkq_A 154 QA--------------------Q----PDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGF 199 (280)
T ss_dssp SC--------------------C----CSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSH
T ss_pred CC--------------------C----CcccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCc
Confidence 10 0 1112233222 1111 3578999999999998863
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.69 E-value=9.3e-17 Score=132.66 Aligned_cols=124 Identities=10% Similarity=-0.077 Sum_probs=92.2
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
..+|++|||||||+||++++++|+ ++|++|++++|+..... .....+. ++.+|++|++++.++++.+
T Consensus 29 l~gk~vlVTGas~gIG~~la~~l~-----~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~-~~~~Dv~d~~~v~~~~~~~ 102 (301)
T 3tjr_A 29 FDGRAAVVTGGASGIGLATATEFA-----RRGARLVLSDVDQPALEQAVNGLRGQGFDAH-GVVCDVRHLDEMVRLADEA 102 (301)
T ss_dssp STTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHHHTTCCEE-EEECCTTCHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHHHhcCCceE-EEEccCCCHHHHHHHHHHH
Confidence 346899999999999999999999 68999999999865311 0134678 9999999999888877654
Q ss_pred cc---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCee
Q 028258 80 SQ---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKH 136 (211)
Q Consensus 80 ~~---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~ 136 (211)
.. .+|++||+|+... .++...+++|+.++.++++++...+.......+|+++||...
T Consensus 103 ~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~ 171 (301)
T 3tjr_A 103 FRLLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAG 171 (301)
T ss_dssp HHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGG
T ss_pred HHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhh
Confidence 21 2899999998632 134567899999999988887543200111357888887543
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.69 E-value=1.4e-16 Score=130.14 Aligned_cols=160 Identities=12% Similarity=0.007 Sum_probs=111.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CC---CCCceeEEEeeCCCHHHHHHHHH
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FP---TALVDRYITFDALDPTDTALKLS 77 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~---~~~~~~~i~~Dl~d~~~~~~~~~ 77 (211)
++|++|||||+|+||++++++|+ ++|++|++++|++.... .. ...+. ++.+|++|++++.++++
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~-----~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~-~~~~Dv~~~~~v~~~~~ 83 (281)
T 3svt_A 10 QDRTYLVTGGGSGIGKGVAAGLV-----AAGASVMIVGRNPDKLAGAVQELEALGANGGAIR-YEPTDITNEDETARAVD 83 (281)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEE-EEECCTTSHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEE-EEeCCCCCHHHHHHHHH
Confidence 46899999999999999999999 68999999999764310 01 12678 89999999998888877
Q ss_pred hccc---ccceEEeecccC-C---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCc
Q 028258 78 LISQ---EITNLFWVPLQV-Q---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDP 144 (211)
Q Consensus 78 ~~~~---~~~~v~~~a~~~-~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~ 144 (211)
.+.. .+|++||+|+.. . .++...+++|+.++.++++++...+... +-.+|+++||...+...
T Consensus 84 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~---- 158 (281)
T 3svt_A 84 AVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRG-GGGSFVGISSIAASNTH---- 158 (281)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCEEEEEECCHHHHSCC----
T ss_pred HHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEEeCHHHcCCC----
Confidence 6521 389999999861 1 1355678999999999998876542101 22488888886544210
Q ss_pred cccCCCCCCCCCCcCCCCCCCCCCcchh----HHHHHhh-----cCCCceEEEecCCceEecC
Q 028258 145 SLAGQLMPYEVPFKEDSSRLPFPNFYYE----LEDVSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 145 ~~~g~~~~~~~~~~e~~~~~~~~~~~~~----~e~~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
+....|.. .+.+.+. ...++.+..++|+.+.++-
T Consensus 159 --------------------~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~ 201 (281)
T 3svt_A 159 --------------------RWFGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDL 201 (281)
T ss_dssp --------------------TTCTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGG
T ss_pred --------------------CCChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcc
Confidence 01112222 1222111 3468999999999998764
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=99.69 E-value=6.8e-16 Score=125.51 Aligned_cols=121 Identities=14% Similarity=0.030 Sum_probs=91.7
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhccc---cc
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQ---EI 83 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~---~~ 83 (211)
..+|++|||||+|+||++++++|+ ++|++|++++|+.... ...++ .+.+|++|++++.++++.+.. .+
T Consensus 12 ~~~k~vlVTGas~GIG~aia~~l~-----~~G~~V~~~~r~~~~~---~~~~~-~~~~Dv~~~~~v~~~~~~~~~~~g~i 82 (269)
T 3vtz_A 12 FTDKVAIVTGGSSGIGLAVVDALV-----RYGAKVVSVSLDEKSD---VNVSD-HFKIDVTNEEEVKEAVEKTTKKYGRI 82 (269)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHH-----HTTCEEEEEESCC--C---TTSSE-EEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEeCCchhc---cCcee-EEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 357899999999999999999999 6899999999987653 24677 899999999988887765421 28
Q ss_pred ceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeee
Q 028258 84 TNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 137 (211)
Q Consensus 84 ~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y 137 (211)
|++||+|+.... .+...+++|+.++.++++++...+. ..+..+|+++||...|
T Consensus 83 D~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~-~~~~g~iv~isS~~~~ 144 (269)
T 3vtz_A 83 DILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVML-AIGHGSIINIASVQSY 144 (269)
T ss_dssp CEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHTCEEEEEECCGGGT
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-HcCCCEEEEECchhhc
Confidence 999999986321 3456778999999888887654320 0134688888886554
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=2.9e-16 Score=126.78 Aligned_cols=161 Identities=12% Similarity=-0.016 Sum_probs=109.8
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC-CCC------C--CCCceeEEEeeCCCHHHHHHHHH
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP-GWF------P--TALVDRYITFDALDPTDTALKLS 77 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~-~~~------~--~~~~~~~i~~Dl~d~~~~~~~~~ 77 (211)
+++|++|||||+|+||++++++|+ ++|++|++++|++.. ... . ..++. ++.+|++|++++.++++
T Consensus 2 l~~k~vlVTGas~gIG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~v~~~~~ 75 (260)
T 1x1t_A 2 LKGKVAVVTGSTSGIGLGIATALA-----AQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVL-YDGADLSKGEAVRGLVD 75 (260)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHH-----HTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEE-EECCCTTSHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHH-----HcCCEEEEEeCCcchHHHHHHHHHHhccCCcEE-EEECCCCCHHHHHHHHH
Confidence 346899999999999999999999 689999999997653 110 0 24677 88999999998888776
Q ss_pred hccc---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCcc
Q 028258 78 LISQ---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPS 145 (211)
Q Consensus 78 ~~~~---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~ 145 (211)
.+.. .+|++||+|+... .++...+++|+.++.++++++...+... +..+|+++||...+..
T Consensus 76 ~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~------ 148 (260)
T 1x1t_A 76 NAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQ-GFGRIINIASAHGLVA------ 148 (260)
T ss_dssp HHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTSC------
T ss_pred HHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEECcHHhCcC------
Confidence 5421 2899999998632 1355678999999888888775432001 3478898888544321
Q ss_pred ccCCCCCCCCCCcCCCCCCCCCCcchh----HHHHHhh-----cCCCceEEEecCCceEecC
Q 028258 146 LAGQLMPYEVPFKEDSSRLPFPNFYYE----LEDVSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 146 ~~g~~~~~~~~~~e~~~~~~~~~~~~~----~e~~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
. +....|.. .+.+.+. ...++++..++|+.+.++.
T Consensus 149 ---------------~---~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 192 (260)
T 1x1t_A 149 ---------------S---ANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPL 192 (260)
T ss_dssp ---------------C---TTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC--
T ss_pred ---------------C---CCCchHHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCch
Confidence 0 01112222 1212111 3468999999999998874
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} | Back alignment and structure |
|---|
Probab=99.69 E-value=1.8e-16 Score=129.58 Aligned_cols=124 Identities=17% Similarity=0.085 Sum_probs=90.7
Q ss_pred CCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 6 QNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 6 ~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
|+++|++|||||+|+||++++++|+ ++|++|++++|++.... .....+. ++.+|++|++++.++++.
T Consensus 21 m~~~k~~lVTGas~GIG~aia~~la-----~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~-~~~~Dv~d~~~v~~~~~~ 94 (279)
T 3sju_A 21 MSRPQTAFVTGVSSGIGLAVARTLA-----ARGIAVYGCARDAKNVSAAVDGLRAAGHDVD-GSSCDVTSTDEVHAAVAA 94 (279)
T ss_dssp ----CEEEEESTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHHTTTCCEE-EEECCTTCHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEE-EEECCCCCHHHHHHHHHH
Confidence 4457899999999999999999999 68999999999765310 1235688 999999999988877765
Q ss_pred ccc---ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhc--CCCCCCceEEEEeecCee
Q 028258 79 ISQ---EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSS--NSGRSRLRHVALLTGTKH 136 (211)
Q Consensus 79 ~~~---~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~~~~~~~s~~~~ 136 (211)
+.. .+|++||+|+.... ++...+++|+.++.++++++... +. ..+..+|+++||...
T Consensus 95 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~~~g~iV~isS~~~ 165 (279)
T 3sju_A 95 AVERFGPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMR-EAGWGRIVNIASTGG 165 (279)
T ss_dssp HHHHHCSCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHH-HHTCEEEEEECCGGG
T ss_pred HHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHh-hcCCcEEEEECChhh
Confidence 421 38999999986431 35567789999999999887551 10 013468888887543
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=99.69 E-value=2.2e-16 Score=126.03 Aligned_cols=121 Identities=11% Similarity=-0.058 Sum_probs=85.2
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEe-CCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAA-RRPPPGW-------FPTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~-R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
+.+|++|||||+|+||++++++|+ ++|++|+++. |++.... ....++. ++.+|++|++++.++++.
T Consensus 3 l~~~~vlItGasggiG~~~a~~l~-----~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~ 76 (247)
T 2hq1_A 3 LKGKTAIVTGSSRGLGKAIAWKLG-----NMGANIVLNGSPASTSLDATAEEFKAAGINVV-VAKGDVKNPEDVENMVKT 76 (247)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHH-----HTTCEEEEEECTTCSHHHHHHHHHHHTTCCEE-EEESCTTSHHHHHHHHHH
T ss_pred CCCcEEEEECCCchHHHHHHHHHH-----HCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEE-EEECCCCCHHHHHHHHHH
Confidence 346899999999999999999999 6899999984 5443210 0134678 899999999988887765
Q ss_pred ccc---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 79 ISQ---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 79 ~~~---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
+.. .+|+|||+|+... .++...+++|+.++.++++++...+. ..+..+|+++||.
T Consensus 77 ~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~-~~~~~~iv~~sS~ 143 (247)
T 2hq1_A 77 AMDAFGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIML-KQKSGKIINITSI 143 (247)
T ss_dssp HHHHHSCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHH-HHTCEEEEEECC-
T ss_pred HHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-hcCCcEEEEEcCh
Confidence 421 2899999998642 23556789999998888877654210 0135788888875
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.69 E-value=2e-16 Score=129.33 Aligned_cols=163 Identities=17% Similarity=0.060 Sum_probs=106.4
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC-CC-------CCCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP-GW-------FPTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~-~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
.++|++|||||+|+||++++++|+ ++|++|++++|+... .. .....+. ++.+|++|++++.++++.
T Consensus 27 ~~~k~~lVTGas~GIG~aia~~la-----~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dv~d~~~v~~~~~~ 100 (280)
T 4da9_A 27 KARPVAIVTGGRRGIGLGIARALA-----ASGFDIAITGIGDAEGVAPVIAELSGLGARVI-FLRADLADLSSHQATVDA 100 (280)
T ss_dssp CCCCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESCCHHHHHHHHHHHHHTTCCEE-EEECCTTSGGGHHHHHHH
T ss_pred cCCCEEEEecCCCHHHHHHHHHHH-----HCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEE-EEEecCCCHHHHHHHHHH
Confidence 346899999999999999999999 699999999975432 10 0135688 999999999988877765
Q ss_pred ccc---ccceEEeecccC--C---------chhHHHHhhcHHHHHHHHHHHHhcCC--CCCCceEEEEeecCeeeecccC
Q 028258 79 ISQ---EITNLFWVPLQV--Q---------ESEEVNIFKNSTMLKNVLSVLVSSNS--GRSRLRHVALLTGTKHYMGPIF 142 (211)
Q Consensus 79 ~~~---~~~~v~~~a~~~--~---------~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~~~~~~~~~s~~~~y~~~~~ 142 (211)
+.. .+|++||+|+.. . .++...+++|+.++.++++++...+. +.....+|+++||...+...
T Consensus 101 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~-- 178 (280)
T 4da9_A 101 VVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTS-- 178 (280)
T ss_dssp HHHHHSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC--------
T ss_pred HHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCC--
Confidence 421 289999999862 1 24556789999999888887765420 00113578888886544210
Q ss_pred CccccCCCCCCCCCCcCCCCCCCCCCcchh----HHHHHh---h--cCCCceEEEecCCceEecCC
Q 028258 143 DPSLAGQLMPYEVPFKEDSSRLPFPNFYYE----LEDVSA---S--YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 143 ~~~~~g~~~~~~~~~~e~~~~~~~~~~~~~----~e~~l~---~--~~~~~~~~i~Rp~~i~G~~~ 199 (211)
+....|.. .+.+.+ . ...++.+..++|+.+..+-.
T Consensus 179 ----------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~ 222 (280)
T 4da9_A 179 ----------------------PERLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMT 222 (280)
T ss_dssp -----------------------CCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC---
T ss_pred ----------------------CCccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCch
Confidence 01112222 121111 1 35789999999999987643
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.69 E-value=5.7e-17 Score=130.67 Aligned_cols=122 Identities=12% Similarity=-0.038 Sum_probs=88.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHhcc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSLIS 80 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~ 80 (211)
|+|++|||||+|+||++++++|+ ++|++|++++|++.... ....++. ++.+|++|++++.++++.+.
T Consensus 1 m~k~vlVTGas~gIG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~v~~~~~~~~ 74 (256)
T 1geg_A 1 MKKVALVTGAGQGIGKAIALRLV-----KDGFAVAIADYNDATAKAVASEINQAGGHAV-AVKVDVSDRDQVFAAVEQAR 74 (256)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHHHTTCCEE-EEECCTTSHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEE-EEEecCCCHHHHHHHHHHHH
Confidence 46899999999999999999999 68999999999764311 0124578 89999999998888776542
Q ss_pred c---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 81 Q---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 81 ~---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
. .+|++||+|+... .++...+++|+.++.++++++...+.......+|+++||..
T Consensus 75 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~ 141 (256)
T 1geg_A 75 KTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQA 141 (256)
T ss_dssp HHTTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGG
T ss_pred HHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchh
Confidence 1 2899999997532 13456789999988887777665321011146888887753
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} | Back alignment and structure |
|---|
Probab=99.69 E-value=1.5e-17 Score=137.76 Aligned_cols=140 Identities=12% Similarity=0.059 Sum_probs=99.3
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCC-CCCC---------CCCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP-PPGW---------FPTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~-~~~~---------~~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
+++||||||||+||++++++|+ ++|++|++++|++ .... +...+++ ++.+|++|++++.+++++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~-----~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~-~v~~D~~d~~~l~~a~~~ 77 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFMVRASL-----SFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVT-IIEGEMEEHEKMVSVLKQ 77 (321)
T ss_dssp CCCEEEETTTSTTHHHHHHHHH-----HTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCE-EEECCTTCHHHHHHHHTT
T ss_pred ccEEEEEcCCchhHHHHHHHHH-----hCCCcEEEEECCcccccChHHHHHHHHhhcCCcE-EEEecCCCHHHHHHHHcC
Confidence 4679999999999999999999 6899999999986 2110 0135789 999999999999999987
Q ss_pred cccccceEEeecccCCchhHHHHhhcHHHHHHHHHHHHhcCCCCCC-ceEEEEeecCeeeecccCCccccCCCCCCCCCC
Q 028258 79 ISQEITNLFWVPLQVQESEEVNIFKNSTMLKNVLSVLVSSNSGRSR-LRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPF 157 (211)
Q Consensus 79 ~~~~~~~v~~~a~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~ 157 (211)
+|+|||+++... +.++.++++++.+. + +++|++ | .|+.. .
T Consensus 78 ----~d~vi~~a~~~~----------~~~~~~l~~aa~~~-----g~v~~~v~-S---~~g~~----------------~ 118 (321)
T 3c1o_A 78 ----VDIVISALPFPM----------ISSQIHIINAIKAA-----GNIKRFLP-S---DFGCE----------------E 118 (321)
T ss_dssp ----CSEEEECCCGGG----------SGGGHHHHHHHHHH-----CCCCEEEC-S---CCSSC----------------G
T ss_pred ----CCEEEECCCccc----------hhhHHHHHHHHHHh-----CCccEEec-c---ccccC----------------c
Confidence 689999987542 33457899999887 5 788873 2 34321 1
Q ss_pred cCCCCCCCCC-Ccchh----HHHHHhhcCCCceEEEecCCceEec
Q 028258 158 KEDSSRLPFP-NFYYE----LEDVSASYSPAITYSVHRSSVIIGA 197 (211)
Q Consensus 158 ~e~~~~~~~~-~~~~~----~e~~l~~~~~~~~~~i~Rp~~i~G~ 197 (211)
+|..+. .| ...|. .|+++ +..+++|+++||+.++|.
T Consensus 119 ~~~~~~--~p~~~~y~sK~~~e~~~--~~~~~~~~~lrp~~~~~~ 159 (321)
T 3c1o_A 119 DRIKPL--PPFESVLEKKRIIRRAI--EAAALPYTYVSANCFGAY 159 (321)
T ss_dssp GGCCCC--HHHHHHHHHHHHHHHHH--HHHTCCBEEEECCEEHHH
T ss_pred cccccC--CCcchHHHHHHHHHHHH--HHcCCCeEEEEeceeccc
Confidence 222221 12 22232 23333 346899999999998875
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.69 E-value=4.8e-16 Score=127.36 Aligned_cols=167 Identities=13% Similarity=-0.051 Sum_probs=111.8
Q ss_pred cccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC-------CCCCCCceeEEEeeCCCHHHHHHH
Q 028258 3 KQDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-------WFPTALVDRYITFDALDPTDTALK 75 (211)
Q Consensus 3 ~~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~-------~~~~~~~~~~i~~Dl~d~~~~~~~ 75 (211)
.|...++|++|||||+|+||++++++|+ ++|++|++++|+.... ......+. ++.+|++|++++.++
T Consensus 22 ~m~~~~~k~~lVTGas~GIG~aia~~la-----~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~-~~~~Dv~d~~~v~~~ 95 (283)
T 3v8b_A 22 SMMNQPSPVALITGAGSGIGRATALALA-----ADGVTVGALGRTRTEVEEVADEIVGAGGQAI-ALEADVSDELQMRNA 95 (283)
T ss_dssp -----CCCEEEEESCSSHHHHHHHHHHH-----HTTCEEEEEESSHHHHHHHHHHHTTTTCCEE-EEECCTTCHHHHHHH
T ss_pred hhcCCCCCEEEEECCCCHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEE-EEEccCCCHHHHHHH
Confidence 3444457899999999999999999999 6899999999976431 11235678 899999999988888
Q ss_pred HHhccc---ccceEEeecccCC----------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccC
Q 028258 76 LSLISQ---EITNLFWVPLQVQ----------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIF 142 (211)
Q Consensus 76 ~~~~~~---~~~~v~~~a~~~~----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~ 142 (211)
++.+.. .+|++||+|+... .++...+++|+.++.++++++...+... +..+|+++||...+..
T Consensus 96 ~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~Iv~isS~~~~~~--- 171 (283)
T 3v8b_A 96 VRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQR-GGGAIVVVSSINGTRT--- 171 (283)
T ss_dssp HHHHHHHHSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCSBTTTB---
T ss_pred HHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCceEEEEcChhhccC---
Confidence 775421 3899999998632 1455678999999999888874321001 3468888887543210
Q ss_pred CccccCCCCCCCCCCcCCCCCCCCCCcchhHHH-----HHhh-----cCCCceEEEecCCceEecCC
Q 028258 143 DPSLAGQLMPYEVPFKEDSSRLPFPNFYYELED-----VSAS-----YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 143 ~~~~~g~~~~~~~~~~e~~~~~~~~~~~~~~e~-----~l~~-----~~~~~~~~i~Rp~~i~G~~~ 199 (211)
.+ .++...|...| +.+. ...++.+..++|+.+..+-.
T Consensus 172 ------------------~~--~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~ 218 (283)
T 3v8b_A 172 ------------------FT--TPGATAYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNIS 218 (283)
T ss_dssp ------------------CC--STTCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTT
T ss_pred ------------------CC--CCCchHHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcc
Confidence 00 01122233222 1111 34689999999999977643
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.69 E-value=5.2e-17 Score=131.82 Aligned_cols=128 Identities=13% Similarity=-0.007 Sum_probs=93.7
Q ss_pred ccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----C---CCCCceeEEEeeCCCHHHHHHH
Q 028258 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----F---PTALVDRYITFDALDPTDTALK 75 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----~---~~~~~~~~i~~Dl~d~~~~~~~ 75 (211)
|....+|++|||||+|+||++++++|+ ++|++|++++|+..... . ....++ ++.+|++|++++.++
T Consensus 15 ~~~l~~k~vlVTGas~gIG~aia~~l~-----~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~-~~~~Dv~~~~~v~~~ 88 (266)
T 4egf_A 15 VLRLDGKRALITGATKGIGADIARAFA-----AAGARLVLSGRDVSELDAARRALGEQFGTDVH-TVAIDLAEPDAPAEL 88 (266)
T ss_dssp GGCCTTCEEEETTTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHHHHHCCCEE-EEECCTTSTTHHHHH
T ss_pred ccCCCCCEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEE-EEEecCCCHHHHHHH
Confidence 333457899999999999999999999 69999999999764311 0 135688 999999999888777
Q ss_pred HHhccc---ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeee
Q 028258 76 LSLISQ---EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 137 (211)
Q Consensus 76 ~~~~~~---~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y 137 (211)
++.+.. .+|++||+|+.... .+...+++|+.++.++++++...+.....-.+|+++||...+
T Consensus 89 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~ 162 (266)
T 4egf_A 89 ARRAAEAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAAL 162 (266)
T ss_dssp HHHHHHHHTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGT
T ss_pred HHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhc
Confidence 765421 38999999986431 355678999999888888776542101113578888875443
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.68 E-value=6e-16 Score=126.30 Aligned_cols=162 Identities=12% Similarity=-0.038 Sum_probs=110.9
Q ss_pred CCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC--------------------CCCCCCceeEEEee
Q 028258 6 QNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG--------------------WFPTALVDRYITFD 65 (211)
Q Consensus 6 ~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~--------------------~~~~~~~~~~i~~D 65 (211)
..++|++|||||+|+||++++++|+ ++|++|++++|+.... ......+. ++.+|
T Consensus 12 ~l~gk~~lVTGas~gIG~a~a~~la-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~D 85 (280)
T 3pgx_A 12 SLQGRVAFITGAARGQGRSHAVRLA-----AEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKAL-TRVLD 85 (280)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHH-----HTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEE-EEECC
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHH-----HCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEE-EEEcC
Confidence 3457899999999999999999999 6999999999853210 00134677 88999
Q ss_pred CCCHHHHHHHHHhccc---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeec
Q 028258 66 ALDPTDTALKLSLISQ---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTG 133 (211)
Q Consensus 66 l~d~~~~~~~~~~~~~---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~ 133 (211)
++|++++.+.++.+.. .+|++||+|+... .++...+++|+.++.++++++...+.....-.+|+++||
T Consensus 86 v~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS 165 (280)
T 3pgx_A 86 VRDDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSS 165 (280)
T ss_dssp TTCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECC
T ss_pred CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcc
Confidence 9999988887765421 2899999998643 145567889999998888887543210112357888887
Q ss_pred CeeeecccCCccccCCCCCCCCCCcCCCCCCCCCCcchhHHH-----HHhh-----cCCCceEEEecCCceEecC
Q 028258 134 TKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELED-----VSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 134 ~~~y~~~~~~~~~~g~~~~~~~~~~e~~~~~~~~~~~~~~e~-----~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
...+.. . +....|...| +.+. ...++++..++|+.+.++.
T Consensus 166 ~~~~~~---------------------~----~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~ 215 (280)
T 3pgx_A 166 SAGLKA---------------------T----PGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPM 215 (280)
T ss_dssp GGGTSC---------------------C----TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTT
T ss_pred hhhccC---------------------C----CCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcc
Confidence 543321 0 1112232222 1111 3468999999999999874
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=2.4e-17 Score=133.20 Aligned_cols=121 Identities=17% Similarity=0.037 Sum_probs=93.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCC-CCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPG-SPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~-~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
.+|++|||||+|+||++++++|+ + .|++|++++|++.... ....+++ ++.+|++|++++.++++.+
T Consensus 3 ~~k~vlITGasggIG~~~a~~L~-----~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~-~~~~Dl~~~~~~~~~~~~~ 76 (276)
T 1wma_A 3 GIHVALVTGGNKGIGLAIVRDLC-----RLFSGDVVLTARDVTRGQAAVQQLQAEGLSPR-FHQLDIDDLQSIRALRDFL 76 (276)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHH-----HHSSSEEEEEESSHHHHHHHHHHHHHTTCCCE-EEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHH-----HhcCCeEEEEeCChHHHHHHHHHHHhcCCeeE-EEECCCCCHHHHHHHHHHH
Confidence 35899999999999999999999 7 8999999999754210 0124678 9999999999888877654
Q ss_pred cc---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeee
Q 028258 80 SQ---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 137 (211)
Q Consensus 80 ~~---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y 137 (211)
.. .+|+|||+|+... .++...+++|+.++.++++++...+ .+..+|+++||...|
T Consensus 77 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~---~~~g~iv~~sS~~~~ 143 (276)
T 1wma_A 77 RKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLI---KPQGRVVNVSSIMSV 143 (276)
T ss_dssp HHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGE---EEEEEEEEECCHHHH
T ss_pred HHhcCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhh---CCCCEEEEECChhhh
Confidence 21 2899999998642 2345568999999999999998752 112488999886655
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=1.2e-16 Score=129.42 Aligned_cols=159 Identities=10% Similarity=-0.060 Sum_probs=110.2
Q ss_pred CCCCeEEEEcCC--ChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC----C--CCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 7 NPKSVALIIGVT--GISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW----F--PTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 7 ~~~~~ilVtGat--G~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~----~--~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
+.+|++|||||+ |+||++++++|+ ++|++|++++|++.... . ..+... ++.+|++|++++.+.++.
T Consensus 7 l~~k~vlVTGas~~~gIG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~-~~~~D~~~~~~v~~~~~~ 80 (265)
T 1qsg_A 7 LSGKRILVTGVASKLSIAYGIAQAMH-----REGAELAFTYQNDKLKGRVEEFAAQLGSDI-VLQCDVAEDASIDTMFAE 80 (265)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHH-----HTTCEEEEEESSTTTHHHHHHHHHHTTCCC-EEECCTTCHHHHHHHHHH
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHH-----HCCCEEEEEcCcHHHHHHHHHHHHhcCCcE-EEEccCCCHHHHHHHHHH
Confidence 446899999999 999999999999 68999999999862100 0 013457 899999999988888775
Q ss_pred ccc---ccceEEeecccCC--------------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeeccc
Q 028258 79 ISQ---EITNLFWVPLQVQ--------------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPI 141 (211)
Q Consensus 79 ~~~---~~~~v~~~a~~~~--------------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~ 141 (211)
+.. .+|++||+|+... .++...+++|+.++.++++++...+. +-.+|+++||...+..
T Consensus 81 ~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~---~~g~iv~isS~~~~~~-- 155 (265)
T 1qsg_A 81 LGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLN---PGSALLTLSYLGAERA-- 155 (265)
T ss_dssp HHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEE---EEEEEEEEECGGGTSB--
T ss_pred HHHHcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhc---cCCEEEEEcchhhccC--
Confidence 421 2899999998642 13445789999999999999887521 1247888887543311
Q ss_pred CCccccCCCCCCCCCCcCCCCCCCCCCcchh----HHHHHhh-----cCCCceEEEecCCceEecC
Q 028258 142 FDPSLAGQLMPYEVPFKEDSSRLPFPNFYYE----LEDVSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 142 ~~~~~~g~~~~~~~~~~e~~~~~~~~~~~~~----~e~~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
. +....|.. .+.+.+. ...++++.++||+.+.++.
T Consensus 156 -------------------~---~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 199 (265)
T 1qsg_A 156 -------------------I---PNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLA 199 (265)
T ss_dssp -------------------C---TTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTT
T ss_pred -------------------C---CCchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccch
Confidence 0 01112222 1222211 3468999999999999874
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
Probab=99.68 E-value=1.1e-16 Score=127.57 Aligned_cols=153 Identities=12% Similarity=0.056 Sum_probs=103.7
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEE-eCCCCCCC-------CCCCCceeE-EEeeCCCHHHHHHHHHhcc
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGA-ARRPPPGW-------FPTALVDRY-ITFDALDPTDTALKLSLIS 80 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~-~R~~~~~~-------~~~~~~~~~-i~~Dl~d~~~~~~~~~~~~ 80 (211)
|++|||||||+||++++++|+ ++|++|+++ +|++.... .....+. . +.+|++|++++.++++.+.
T Consensus 2 k~vlITGasggiG~~~a~~l~-----~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~ 75 (245)
T 2ph3_A 2 RKALITGASRGIGRAIALRLA-----EDGFALAIHYGQNREKAEEVAEEARRRGSPLV-AVLGANLLEAEAATALVHQAA 75 (245)
T ss_dssp CEEEETTTTSHHHHHHHHHHH-----TTTCEEEEEESSCHHHHHHHHHHHHHTTCSCE-EEEECCTTSHHHHHHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHH-----HCCCEEEEEcCCCHHHHHHHHHHHHhcCCceE-EEEeccCCCHHHHHHHHHHHH
Confidence 789999999999999999999 689999988 67643210 0123556 6 8999999998888776532
Q ss_pred c---ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHH----HHhcCCCCCCceEEEEeecCeeeecccCCc
Q 028258 81 Q---EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSV----LVSSNSGRSRLRHVALLTGTKHYMGPIFDP 144 (211)
Q Consensus 81 ~---~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~----~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~ 144 (211)
. .+|.|||+|+.... ++...+++|+.++.+++++ +++. +..+|+++||...+.+.
T Consensus 76 ~~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-----~~~~iv~~sS~~~~~~~---- 146 (245)
T 2ph3_A 76 EVLGGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKA-----RFGRIVNITSVVGILGN---- 146 (245)
T ss_dssp HHHTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCTHHHHCC----
T ss_pred HhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhc-----CCCEEEEEeChhhccCC----
Confidence 1 28999999986421 3456778999995555544 4443 45789999886443210
Q ss_pred cccCCCCCCCCCCcCCCCCCCCCCcchhHHH-----HHhh-----cCCCceEEEecCCceEecC
Q 028258 145 SLAGQLMPYEVPFKEDSSRLPFPNFYYELED-----VSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 145 ~~~g~~~~~~~~~~e~~~~~~~~~~~~~~e~-----~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
++...|...| +... ...+++++++||+.++++.
T Consensus 147 ---------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 189 (245)
T 2ph3_A 147 ---------------------PGQANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEM 189 (245)
T ss_dssp ---------------------SSBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred ---------------------CCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcc
Confidence 0111122222 2211 3458999999999998864
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.68 E-value=9.6e-17 Score=129.98 Aligned_cols=122 Identities=13% Similarity=-0.100 Sum_probs=91.2
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCC-CCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR-PPPGW-------FPTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~-~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
+.+|++|||||+|+||++++++|+ ++|++|++++|+ +.... ....++. ++.+|++|++++.++++.
T Consensus 19 ~~~k~vlItGasggiG~~la~~l~-----~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~-~~~~D~~~~~~~~~~~~~ 92 (274)
T 1ja9_A 19 LAGKVALTTGAGRGIGRGIAIELG-----RRGASVVVNYGSSSKAAEEVVAELKKLGAQGV-AIQADISKPSEVVALFDK 92 (274)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHH-----HTTCEEEEEESSCHHHHHHHHHHHHHTTCCEE-EEECCTTSHHHHHHHHHH
T ss_pred CCCCEEEEeCCCchHHHHHHHHHH-----HCCCEEEEEcCCchHHHHHHHHHHHhcCCcEE-EEEecCCCHHHHHHHHHH
Confidence 346899999999999999999999 689999999993 32210 0134678 899999999988887764
Q ss_pred ccc---ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeee
Q 028258 79 ISQ---EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 137 (211)
Q Consensus 79 ~~~---~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y 137 (211)
+.. .+|+|||+|+.... ++...+++|+.++.++++++...+. +-.+|+++||...|
T Consensus 93 ~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~~~iv~~sS~~~~ 160 (274)
T 1ja9_A 93 AVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCR---RGGRIILTSSIAAV 160 (274)
T ss_dssp HHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEE---EEEEEEEECCGGGT
T ss_pred HHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHh---hCCEEEEEcChHhc
Confidence 421 28999999986421 3456789999999999998876521 11588888886544
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.68 E-value=1.9e-16 Score=129.56 Aligned_cols=159 Identities=15% Similarity=0.028 Sum_probs=108.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHhcc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSLIS 80 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~ 80 (211)
++|++|||||||+||++++++|+ ++|++|++++|++.+.. ....++. ++.+|++|++++.++++.+.
T Consensus 43 ~~k~vlITGasggIG~~la~~L~-----~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~-~~~~Dl~d~~~v~~~~~~~~ 116 (285)
T 2c07_A 43 ENKVALVTGAGRGIGREIAKMLA-----KSVSHVICISRTQKSCDSVVDEIKSFGYESS-GYAGDVSKKEEISEVINKIL 116 (285)
T ss_dssp SSCEEEEESTTSHHHHHHHHHHT-----TTSSEEEEEESSHHHHHHHHHHHHTTTCCEE-EEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHH-----HcCCEEEEEcCCHHHHHHHHHHHHhcCCcee-EEECCCCCHHHHHHHHHHHH
Confidence 46899999999999999999999 68999999888654210 0134678 89999999998888876542
Q ss_pred c---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccC
Q 028258 81 Q---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAG 148 (211)
Q Consensus 81 ~---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g 148 (211)
. .+|.|||+|+... .++...+++|+.++.++++++...+. ..+..+|+++||...+.+.
T Consensus 117 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-~~~~~~iv~isS~~~~~~~-------- 187 (285)
T 2c07_A 117 TEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMI-NNRYGRIINISSIVGLTGN-------- 187 (285)
T ss_dssp HHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHH-HHTCEEEEEECCTHHHHCC--------
T ss_pred HhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-hCCCCEEEEECChhhccCC--------
Confidence 1 2899999998642 13456789999997777776653210 0135788998886544210
Q ss_pred CCCCCCCCCcCCCCCCCCCCcchhHHH-----HHhh-----cCCCceEEEecCCceEecC
Q 028258 149 QLMPYEVPFKEDSSRLPFPNFYYELED-----VSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 149 ~~~~~~~~~~e~~~~~~~~~~~~~~e~-----~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
+....|...| +... ...+++++++||+.+.++.
T Consensus 188 -----------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 230 (285)
T 2c07_A 188 -----------------VGQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDM 230 (285)
T ss_dssp -----------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC--
T ss_pred -----------------CCCchHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCc
Confidence 0111222222 1111 3468999999999998764
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.68 E-value=4.4e-16 Score=126.94 Aligned_cols=161 Identities=9% Similarity=-0.011 Sum_probs=109.5
Q ss_pred CCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC------CCCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 6 QNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG------WFPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 6 ~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~------~~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
...+|++|||||+|+||++++++|+ ++|++|++++|+.... ......++ ++.+|++|++++.+..+.+
T Consensus 28 ~l~gk~~lVTGas~GIG~aia~~la-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~Dv~d~~~v~~~~~~~ 101 (273)
T 3uf0_A 28 SLAGRTAVVTGAGSGIGRAIAHGYA-----RAGAHVLAWGRTDGVKEVADEIADGGGSAE-AVVADLADLEGAANVAEEL 101 (273)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESSTHHHHHHHHHHTTTCEEE-EEECCTTCHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEcCHHHHHHHHHHHHhcCCcEE-EEEecCCCHHHHHHHHHHH
Confidence 3457899999999999999999999 6899999999764211 01235678 8999999998876664432
Q ss_pred c--cccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccC
Q 028258 80 S--QEITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAG 148 (211)
Q Consensus 80 ~--~~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g 148 (211)
. ..+|++||+|+.... ++...+++|+.++.++++++...+. ..+..+|+++||...+...
T Consensus 102 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~-~~~~g~IV~isS~~~~~~~-------- 172 (273)
T 3uf0_A 102 AATRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAML-AHGSGRIVTIASMLSFQGG-------- 172 (273)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHTCEEEEEECCGGGTSCC--------
T ss_pred HhcCCCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-hcCCCEEEEEcchHhcCCC--------
Confidence 1 138999999987431 4556789999999888887743210 0134688888875443210
Q ss_pred CCCCCCCCCcCCCCCCCCCCcchhHHH-----HHhh-----cCCCceEEEecCCceEecC
Q 028258 149 QLMPYEVPFKEDSSRLPFPNFYYELED-----VSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 149 ~~~~~~~~~~e~~~~~~~~~~~~~~e~-----~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
+....|...| +.+. ...++++..++|+.+..+.
T Consensus 173 -----------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~ 215 (273)
T 3uf0_A 173 -----------------RNVAAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTAN 215 (273)
T ss_dssp -----------------SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGG
T ss_pred -----------------CCChhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCc
Confidence 1111232222 1111 3468999999999998764
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.68 E-value=1.2e-16 Score=127.52 Aligned_cols=120 Identities=14% Similarity=-0.029 Sum_probs=90.6
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC----CCCCCceeEEEeeCCCHHHHHHHHHhccc---
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW----FPTALVDRYITFDALDPTDTALKLSLISQ--- 81 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~----~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~--- 81 (211)
+|++|||||+|+||++++++|+ ++|++|++++|+..... ....++. ++.+|++|++++.++++.+..
T Consensus 3 ~k~vlVTGas~GIG~a~a~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~D~~~~~~v~~~~~~~~~~~g 76 (235)
T 3l6e_A 3 LGHIIVTGAGSGLGRALTIGLV-----ERGHQVSMMGRRYQRLQQQELLLGNAVI-GIVADLAHHEDVDVAFAAAVEWGG 76 (235)
T ss_dssp CCEEEEESTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHGGGEE-EEECCTTSHHHHHHHHHHHHHHHC
T ss_pred CCEEEEECCCCHHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHhcCCce-EEECCCCCHHHHHHHHHHHHHhcC
Confidence 5899999999999999999999 68999999999865311 0123578 999999999988887765421
Q ss_pred ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCee
Q 028258 82 EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKH 136 (211)
Q Consensus 82 ~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~ 136 (211)
.+|.+||+|+... .++...+++|+.++.++++++...+.... .+++++||...
T Consensus 77 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~--~~iv~isS~~~ 138 (235)
T 3l6e_A 77 LPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERG--GVLANVLSSAA 138 (235)
T ss_dssp SCSEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC--EEEEEECCEEC
T ss_pred CCcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC--CEEEEEeCHHh
Confidence 3899999998632 24566789999999888888865432122 37888877543
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.68 E-value=2e-16 Score=129.18 Aligned_cols=123 Identities=11% Similarity=-0.085 Sum_probs=92.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC----CCCCCceeEEEeeCCCHHHHHHHHHhccc--
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW----FPTALVDRYITFDALDPTDTALKLSLISQ-- 81 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~----~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~-- 81 (211)
++|++|||||+|+||++++++|+ ++|++|++++|++.... .....+. ++.+|++|++++.++++.+..
T Consensus 26 ~~k~vlVTGas~GIG~aia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~Dv~d~~~v~~~~~~~~~~~ 99 (277)
T 4dqx_A 26 NQRVCIVTGGGSGIGRATAELFA-----KNGAYVVVADVNEDAAVRVANEIGSKAF-GVRVDVSSAKDAESMVEKTTAKW 99 (277)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESSHHHHHHHHHHHCTTEE-EEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHhCCceE-EEEecCCCHHHHHHHHHHHHHHc
Confidence 46899999999999999999999 69999999999765311 0135678 899999999988887765421
Q ss_pred -ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeee
Q 028258 82 -EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 137 (211)
Q Consensus 82 -~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y 137 (211)
.+|++||+|+... .++...+++|+.++.++++++...+... +..+|+++||...+
T Consensus 100 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~ 164 (277)
T 4dqx_A 100 GRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRN-GGGSIINTTSYTAT 164 (277)
T ss_dssp SCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT-TCEEEEEECCGGGT
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCcEEEEECchhhC
Confidence 2899999998632 1455677899999988888876543111 34688888875443
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=99.68 E-value=8.8e-16 Score=123.48 Aligned_cols=115 Identities=12% Similarity=0.073 Sum_probs=89.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhccc---ccc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQ---EIT 84 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~---~~~ 84 (211)
|+|++|||||+|+||++++++|+ ++|++|++++|++.+. ... .+.+|++|++++.++++.+.. .+|
T Consensus 21 m~k~vlITGas~gIG~~la~~l~-----~~G~~V~~~~r~~~~~-----~~~-~~~~d~~d~~~v~~~~~~~~~~~g~iD 89 (251)
T 3orf_A 21 MSKNILVLGGSGALGAEVVKFFK-----SKSWNTISIDFRENPN-----ADH-SFTIKDSGEEEIKSVIEKINSKSIKVD 89 (251)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESSCCTT-----SSE-EEECSCSSHHHHHHHHHHHHTTTCCEE
T ss_pred cCCEEEEECCCCHHHHHHHHHHH-----HCCCEEEEEeCCcccc-----ccc-ceEEEeCCHHHHHHHHHHHHHHcCCCC
Confidence 57899999999999999999999 6899999999987643 224 678999999998888776521 389
Q ss_pred eEEeecccCC----------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCee
Q 028258 85 NLFWVPLQVQ----------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKH 136 (211)
Q Consensus 85 ~v~~~a~~~~----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~ 136 (211)
++||+|+... .++...+++|+.++.++++++...+ .+-.+|+++||...
T Consensus 90 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~---~~~g~iv~isS~~~ 148 (251)
T 3orf_A 90 TFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLL---NQGGLFVLTGASAA 148 (251)
T ss_dssp EEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHE---EEEEEEEEECCGGG
T ss_pred EEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhh---ccCCEEEEEechhh
Confidence 9999998521 1345677899999999999988752 11247888887543
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.68 E-value=7.4e-16 Score=123.29 Aligned_cols=154 Identities=14% Similarity=0.078 Sum_probs=110.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhccc-ccceE
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQ-EITNL 86 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~-~~~~v 86 (211)
++|++|||||+|+||++++++|++ +.|+.|++++|++... ...++ ++.+|++|++++.+.++.+.. .+|++
T Consensus 3 ~~k~vlITGas~gIG~~~a~~l~~----~~g~~v~~~~~~~~~~---~~~~~-~~~~Dv~~~~~v~~~~~~~~~~~id~l 74 (244)
T 4e4y_A 3 AMANYLVTGGSKGIGKAVVELLLQ----NKNHTVINIDIQQSFS---AENLK-FIKADLTKQQDITNVLDIIKNVSFDGI 74 (244)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTT----STTEEEEEEESSCCCC---CTTEE-EEECCTTCHHHHHHHHHHTTTCCEEEE
T ss_pred CCCeEEEeCCCChHHHHHHHHHHh----cCCcEEEEeccccccc---cccce-EEecCcCCHHHHHHHHHHHHhCCCCEE
Confidence 357899999999999999999993 3789999999876532 35678 999999999998888865421 38999
Q ss_pred EeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCC
Q 028258 87 FWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPF 157 (211)
Q Consensus 87 ~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~ 157 (211)
||+|+... .++...+++|+.++.++++++...+ ..-.+++++||...+..
T Consensus 75 v~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~---~~~g~iv~~sS~~~~~~------------------ 133 (244)
T 4e4y_A 75 FLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNL---KVGASIVFNGSDQCFIA------------------ 133 (244)
T ss_dssp EECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGE---EEEEEEEEECCGGGTCC------------------
T ss_pred EECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHh---ccCcEEEEECCHHHccC------------------
Confidence 99998632 1456678999999999999887652 11147888877543321
Q ss_pred cCCCCCCCCCCcchhHHH-----HHhh-----cCCCceEEEecCCceEec
Q 028258 158 KEDSSRLPFPNFYYELED-----VSAS-----YSPAITYSVHRSSVIIGA 197 (211)
Q Consensus 158 ~e~~~~~~~~~~~~~~e~-----~l~~-----~~~~~~~~i~Rp~~i~G~ 197 (211)
.+....|...| +.+. ...++.+..++|+.+..+
T Consensus 134 -------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~ 176 (244)
T 4e4y_A 134 -------KPNSFAYTLSKGAIAQMTKSLALDLAKYQIRVNTVCPGTVDTD 176 (244)
T ss_dssp -------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESCBCCH
T ss_pred -------CCCCchhHHHHHHHHHHHHHHHHHHHHcCeEEEEEecCccCch
Confidence 01112233222 1111 356899999999999875
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=4.2e-16 Score=128.43 Aligned_cols=165 Identities=10% Similarity=-0.056 Sum_probs=115.8
Q ss_pred CccccCCCCCeEEEEcCCC--hHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC------CCCCCceeEEEeeCCCHHHH
Q 028258 1 MEKQDQNPKSVALIIGVTG--ISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW------FPTALVDRYITFDALDPTDT 72 (211)
Q Consensus 1 ~~~~~~~~~~~ilVtGatG--~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~------~~~~~~~~~i~~Dl~d~~~~ 72 (211)
|.+|..+.+|++|||||+| +||++++++|+ ++|++|++++|+..... .....+. ++.+|++|++++
T Consensus 22 m~~~~~l~~k~vlVTGasg~~GIG~~ia~~la-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~Dv~d~~~v 95 (296)
T 3k31_A 22 MRTGMLMEGKKGVIIGVANDKSLAWGIAKAVC-----AQGAEVALTYLSETFKKRVDPLAESLGVKL-TVPCDVSDAESV 95 (296)
T ss_dssp CCCCCTTTTCEEEEECCCSTTSHHHHHHHHHH-----HTTCEEEEEESSGGGHHHHHHHHHHHTCCE-EEECCTTCHHHH
T ss_pred ccchhccCCCEEEEEeCCCCCCHHHHHHHHHH-----HCCCEEEEEeCChHHHHHHHHHHHhcCCeE-EEEcCCCCHHHH
Confidence 4455555679999999998 99999999999 68999999999854210 0124567 899999999998
Q ss_pred HHHHHhccc---ccceEEeecccCC-------------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCee
Q 028258 73 ALKLSLISQ---EITNLFWVPLQVQ-------------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKH 136 (211)
Q Consensus 73 ~~~~~~~~~---~~~~v~~~a~~~~-------------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~ 136 (211)
.++++.+.. .+|++||+|+... .++...+++|+.++.++++++...+ ..-.+|+++||...
T Consensus 96 ~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m---~~~g~IV~isS~~~ 172 (296)
T 3k31_A 96 DNMFKVLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLM---TNGGSILTLSYYGA 172 (296)
T ss_dssp HHHHHHHHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGC---TTCEEEEEEECGGG
T ss_pred HHHHHHHHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHh---hcCCEEEEEEehhh
Confidence 888776521 3899999998642 1455678999999999999988763 12357888887543
Q ss_pred eecccCCccccCCCCCCCCCCcCCCCCCCCCCcchhH----HHHHhh-----cCCCceEEEecCCceEecC
Q 028258 137 YMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYEL----EDVSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 137 y~~~~~~~~~~g~~~~~~~~~~e~~~~~~~~~~~~~~----e~~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
+.. . +....|... +.+.+. ...++.+..++|+.+..+-
T Consensus 173 ~~~---------------------~---~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~ 219 (296)
T 3k31_A 173 EKV---------------------V---PHYNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLA 219 (296)
T ss_dssp TSC---------------------C---TTTTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSS
T ss_pred ccC---------------------C---CCchhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCch
Confidence 311 0 011122221 111111 3568999999999998764
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G | Back alignment and structure |
|---|
Probab=99.68 E-value=8.8e-17 Score=128.17 Aligned_cols=158 Identities=15% Similarity=0.032 Sum_probs=108.3
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEE-eCCCCCCC-----C--CCCCceeEEEeeCCCHHHHHHHHHhcc
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGA-ARRPPPGW-----F--PTALVDRYITFDALDPTDTALKLSLIS 80 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~-~R~~~~~~-----~--~~~~~~~~i~~Dl~d~~~~~~~~~~~~ 80 (211)
+|++|||||||+||++++++|+ ++|++|+++ .|++.... . ....+. ++.+|++|++++.++++.+.
T Consensus 1 ~k~vlVTGasggiG~~la~~l~-----~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~ 74 (244)
T 1edo_A 1 SPVVVVTGASRGIGKAIALSLG-----KAGCKVLVNYARSAKAAEEVSKQIEAYGGQAI-TFGGDVSKEADVEAMMKTAI 74 (244)
T ss_dssp CCEEEETTCSSHHHHHHHHHHH-----HTTCEEEEEESSCHHHHHHHHHHHHHHTCEEE-EEECCTTSHHHHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHH-----HCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEE-EEeCCCCCHHHHHHHHHHHH
Confidence 3789999999999999999999 689999985 66543210 0 124577 88999999998888876542
Q ss_pred c---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccC
Q 028258 81 Q---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAG 148 (211)
Q Consensus 81 ~---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g 148 (211)
. .+|.+||+|+... .++...+++|+.++.++++++...+. ..+..+|+++||...+...
T Consensus 75 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~iv~~sS~~~~~~~-------- 145 (244)
T 1edo_A 75 DAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMM-KKRKGRIINIASVVGLIGN-------- 145 (244)
T ss_dssp HHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHTCEEEEEECCTHHHHCC--------
T ss_pred HHcCCCCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHH-hcCCCEEEEECChhhcCCC--------
Confidence 1 2899999998643 13456789999998888887765310 0135788998886443210
Q ss_pred CCCCCCCCCcCCCCCCCCCCcchhHHH-----HHhh-----cCCCceEEEecCCceEecC
Q 028258 149 QLMPYEVPFKEDSSRLPFPNFYYELED-----VSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 149 ~~~~~~~~~~e~~~~~~~~~~~~~~e~-----~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
++...|...| +.+. ...+++++++||+.++++.
T Consensus 146 -----------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 188 (244)
T 1edo_A 146 -----------------IGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDM 188 (244)
T ss_dssp -----------------TTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHH
T ss_pred -----------------CCCccchhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccch
Confidence 0111122222 1111 3478999999999998864
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.68 E-value=3.4e-16 Score=125.46 Aligned_cols=122 Identities=12% Similarity=0.025 Sum_probs=91.6
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC--CCCCCceeEEEeeCCCHHHHHHHHHhccc---
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW--FPTALVDRYITFDALDPTDTALKLSLISQ--- 81 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~--~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~--- 81 (211)
+.+|++|||||||+||++++++|+ ++|++|++++|++.+.. ....+++ ++.+|++|++++.++++.+..
T Consensus 3 l~~k~vlVTGas~giG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~g 76 (245)
T 1uls_A 3 LKDKAVLITGAAHGIGRATLELFA-----KEGARLVACDIEEGPLREAAEAVGAH-PVVMDVADPASVERGFAEALAHLG 76 (245)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHTTTCE-EEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHcCCE-EEEecCCCHHHHHHHHHHHHHHcC
Confidence 346899999999999999999999 68999999999764311 0011378 899999999988887765421
Q ss_pred ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 82 EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 82 ~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
.+|++||+|+... .++...+++|+.++.++++++...+... +..+|+++||..
T Consensus 77 ~id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-~~g~iv~isS~~ 138 (245)
T 1uls_A 77 RLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREK-NPGSIVLTASRV 138 (245)
T ss_dssp SCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-CCEEEEEECCGG
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCEEEEEccch
Confidence 2899999998632 1355678999999999888876543211 357888888765
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.68 E-value=1.1e-16 Score=130.58 Aligned_cols=129 Identities=16% Similarity=0.026 Sum_probs=90.9
Q ss_pred ccccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC----CCCCCceeEEEeeCCCHHHHHHHHH
Q 028258 2 EKQDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW----FPTALVDRYITFDALDPTDTALKLS 77 (211)
Q Consensus 2 ~~~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~----~~~~~~~~~i~~Dl~d~~~~~~~~~ 77 (211)
..|...++|++|||||+|+||++++++|+ ++|++|++++|+.+... ....++. ++.+|++|++++.+.++
T Consensus 21 ~~m~~~~~k~~lVTGas~GIG~aia~~la-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~Dv~d~~~v~~~~~ 94 (272)
T 4dyv_A 21 QSMSKTGKKIAIVTGAGSGVGRAVAVALA-----GAGYGVALAGRRLDALQETAAEIGDDAL-CVPTDVTDPDSVRALFT 94 (272)
T ss_dssp -------CCEEEETTTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHTSCCE-EEECCTTSHHHHHHHHH
T ss_pred hhhcCCCCCEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHhCCCeE-EEEecCCCHHHHHHHHH
Confidence 35666678999999999999999999999 68999999999765311 0125678 99999999998888876
Q ss_pred hccc---ccceEEeecccCC----------chhHHHHhhcHHHHHHHHHHHHhcCCC-CCCceEEEEeecCee
Q 028258 78 LISQ---EITNLFWVPLQVQ----------ESEEVNIFKNSTMLKNVLSVLVSSNSG-RSRLRHVALLTGTKH 136 (211)
Q Consensus 78 ~~~~---~~~~v~~~a~~~~----------~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~~~~~~~s~~~~ 136 (211)
.+.. .+|++||+|+... .++...+++|+.++.++++++...+.. ..+-.+|+++||...
T Consensus 95 ~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~ 167 (272)
T 4dyv_A 95 ATVEKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISA 167 (272)
T ss_dssp HHHHHHSCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSST
T ss_pred HHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhh
Confidence 5421 2899999998632 134567899999988888776654210 111358888887543
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=3e-16 Score=126.83 Aligned_cols=160 Identities=10% Similarity=-0.022 Sum_probs=110.0
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEE-eCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGA-ARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~-~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
+++|++|||||+|+||++++++|+ ++|++|+++ .|+..... ....++. ++.+|++|++++.++++.
T Consensus 2 ~~~k~vlVTGas~gIG~aia~~l~-----~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~v~~~~~~ 75 (258)
T 3oid_A 2 EQNKCALVTGSSRGVGKAAAIRLA-----ENGYNIVINYARSKKAALETAEEIEKLGVKVL-VVKANVGQPAKIKEMFQQ 75 (258)
T ss_dssp -CCCEEEESSCSSHHHHHHHHHHH-----HTTCEEEEEESSCHHHHHHHHHHHHTTTCCEE-EEECCTTCHHHHHHHHHH
T ss_pred CCCCEEEEecCCchHHHHHHHHHH-----HCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEE-EEEcCCCCHHHHHHHHHH
Confidence 346899999999999999999999 699999886 66543210 1235678 999999999998888776
Q ss_pred ccc---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccc
Q 028258 79 ISQ---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSL 146 (211)
Q Consensus 79 ~~~---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~ 146 (211)
+.. .+|++||+|+... .++...+++|+.++.++++++...+... +..+|+++||...+..
T Consensus 76 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~-~~g~iv~isS~~~~~~------- 147 (258)
T 3oid_A 76 IDETFGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKN-GGGHIVSISSLGSIRY------- 147 (258)
T ss_dssp HHHHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTT-TCEEEEEEEEGGGTSB-------
T ss_pred HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEECchhhCCC-------
Confidence 521 2899999997532 1355678999999999888875432111 3468888888543321
Q ss_pred cCCCCCCCCCCcCCCCCCCCCCcchhHHH-----HHhh-----cCCCceEEEecCCceEecC
Q 028258 147 AGQLMPYEVPFKEDSSRLPFPNFYYELED-----VSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 147 ~g~~~~~~~~~~e~~~~~~~~~~~~~~e~-----~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
.+....|...| +.+. ...++.+..++|+.+..+-
T Consensus 148 ------------------~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~ 191 (258)
T 3oid_A 148 ------------------LENYTTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDA 191 (258)
T ss_dssp ------------------CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGG
T ss_pred ------------------CCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChh
Confidence 01112232222 1111 3458999999999998763
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.68 E-value=7.6e-16 Score=128.09 Aligned_cols=163 Identities=12% Similarity=-0.051 Sum_probs=111.5
Q ss_pred ccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------------------CCCCCceeEEEe
Q 028258 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------------------FPTALVDRYITF 64 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------------------~~~~~~~~~i~~ 64 (211)
|....+|++|||||+|+||++++++|+ ++|++|++++|+..... .....+. ++.+
T Consensus 41 m~~l~gk~~lVTGas~GIG~aia~~la-----~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 114 (317)
T 3oec_A 41 MNRLQGKVAFITGAARGQGRTHAVRLA-----QDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRII-ARQA 114 (317)
T ss_dssp -CTTTTCEEEESSCSSHHHHHHHHHHH-----HTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEE-EEEC
T ss_pred hhccCCCEEEEeCCCcHHHHHHHHHHH-----HCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEE-EEEC
Confidence 444567899999999999999999999 69999999988632110 0124677 8999
Q ss_pred eCCCHHHHHHHHHhccc---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEee
Q 028258 65 DALDPTDTALKLSLISQ---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLT 132 (211)
Q Consensus 65 Dl~d~~~~~~~~~~~~~---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s 132 (211)
|++|++++.++++.+.. .+|++||+|+... .++...+++|+.++.++++++...+.....-.+|+++|
T Consensus 115 Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~is 194 (317)
T 3oec_A 115 DVRDLASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVS 194 (317)
T ss_dssp CTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEEC
T ss_pred CCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEEC
Confidence 99999988887765421 2899999998642 14566789999999998888765421011235788888
Q ss_pred cCeeeecccCCccccCCCCCCCCCCcCCCCCCCCCCcchhHHH-----HHhh-----cCCCceEEEecCCceEec
Q 028258 133 GTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELED-----VSAS-----YSPAITYSVHRSSVIIGA 197 (211)
Q Consensus 133 ~~~~y~~~~~~~~~~g~~~~~~~~~~e~~~~~~~~~~~~~~e~-----~l~~-----~~~~~~~~i~Rp~~i~G~ 197 (211)
|...+... +....|...| +.+. ...|+.+..++|+.|.++
T Consensus 195 S~~~~~~~-------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~ 244 (317)
T 3oec_A 195 STVGLRGA-------------------------PGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTE 244 (317)
T ss_dssp CGGGSSCC-------------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSH
T ss_pred cHHhcCCC-------------------------CCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCc
Confidence 75443210 1112233222 1111 346899999999999876
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=1.5e-16 Score=127.92 Aligned_cols=161 Identities=16% Similarity=0.080 Sum_probs=111.5
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcE-EEEEeCCCCCCC-------CCCCCceeEEEeeCCCH-HHHHHHHH
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWK-VYGAARRPPPGW-------FPTALVDRYITFDALDP-TDTALKLS 77 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~-V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~-~~~~~~~~ 77 (211)
+.+|+++||||+|+||++++++|+ ++|++ |++++|++.... ....+++ ++.+|++|+ +++.++++
T Consensus 3 l~~k~vlVtGas~gIG~~~a~~l~-----~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~-~~~~D~~~~~~~~~~~~~ 76 (254)
T 1sby_A 3 LTNKNVIFVAALGGIGLDTSRELV-----KRNLKNFVILDRVENPTALAELKAINPKVNIT-FHTYDVTVPVAESKKLLK 76 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHH-----HTCCSEEEEEESSCCHHHHHHHHHHCTTSEEE-EEECCTTSCHHHHHHHHH
T ss_pred CCCcEEEEECCCChHHHHHHHHHH-----HCCCcEEEEEecCchHHHHHHHHHhCCCceEE-EEEEecCCChHHHHHHHH
Confidence 346899999999999999999999 68996 999999764210 0124678 899999998 77777766
Q ss_pred hccc---ccceEEeecccCC-chhHHHHhhcHHHHHHHHHHHHhcCCCC--CCceEEEEeecCeeeecccCCccccCCCC
Q 028258 78 LISQ---EITNLFWVPLQVQ-ESEEVNIFKNSTMLKNVLSVLVSSNSGR--SRLRHVALLTGTKHYMGPIFDPSLAGQLM 151 (211)
Q Consensus 78 ~~~~---~~~~v~~~a~~~~-~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~~~~~~~s~~~~y~~~~~~~~~~g~~~ 151 (211)
.+.. .+|++||+|+... .++...+++|+.++.++++++...+... ..-.+|+++||...|...
T Consensus 77 ~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------- 145 (254)
T 1sby_A 77 KIFDQLKTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAI----------- 145 (254)
T ss_dssp HHHHHHSCCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCC-----------
T ss_pred HHHHhcCCCCEEEECCccCCHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCC-----------
Confidence 4411 2899999998753 4677889999999999999887542101 013578888886544210
Q ss_pred CCCCCCcCCCCCCCCCCcchhHHH-----HHhh-----cCCCceEEEecCCceEecC
Q 028258 152 PYEVPFKEDSSRLPFPNFYYELED-----VSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 152 ~~~~~~~e~~~~~~~~~~~~~~e~-----~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
+....|...| +... ...++++++++|+.+.++-
T Consensus 146 --------------~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~ 188 (254)
T 1sby_A 146 --------------HQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPL 188 (254)
T ss_dssp --------------TTSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHH
T ss_pred --------------CCchHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCcc
Confidence 0111232222 2211 1268999999999999874
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A | Back alignment and structure |
|---|
Probab=99.68 E-value=1.5e-16 Score=128.34 Aligned_cols=161 Identities=14% Similarity=-0.000 Sum_probs=113.3
Q ss_pred ccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC----CCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW----FPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~----~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
|....+|++|||||+|+||++++++|+ ++|++|++++|+++... ....++. ++.+|++|++++.+.++.+
T Consensus 3 m~~l~gk~~lVTGas~gIG~a~a~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~v~~~~~~~ 76 (255)
T 4eso_A 3 MGNYQGKKAIVIGGTHGMGLATVRRLV-----EGGAEVLLTGRNESNIARIREEFGPRVH-ALRSDIADLNEIAVLGAAA 76 (255)
T ss_dssp -CTTTTCEEEEETCSSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHGGGEE-EEECCTTCHHHHHHHHHHH
T ss_pred CcCCCCCEEEEECCCCHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHhCCcce-EEEccCCCHHHHHHHHHHH
Confidence 334457899999999999999999999 68999999999865321 0125678 9999999999887776654
Q ss_pred cc---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCcccc
Q 028258 80 SQ---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLA 147 (211)
Q Consensus 80 ~~---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~ 147 (211)
.. .+|++||+|+... .++...+++|+.++.++++++...+ .+-.+|+++||...+..
T Consensus 77 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~---~~~g~iv~isS~~~~~~-------- 145 (255)
T 4eso_A 77 GQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLI---REGGSIVFTSSVADEGG-------- 145 (255)
T ss_dssp HHHHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE---EEEEEEEEECCGGGSSB--------
T ss_pred HHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHH---hcCCEEEEECChhhcCC--------
Confidence 21 3899999998642 1455678999999999999987652 12247888887544321
Q ss_pred CCCCCCCCCCcCCCCCCCCCCcchhHHH-----HHh---h--cCCCceEEEecCCceEecC
Q 028258 148 GQLMPYEVPFKEDSSRLPFPNFYYELED-----VSA---S--YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 148 g~~~~~~~~~~e~~~~~~~~~~~~~~e~-----~l~---~--~~~~~~~~i~Rp~~i~G~~ 198 (211)
. +....|...| +.+ . ...++++..++|+.+..+-
T Consensus 146 -------------~----~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~ 189 (255)
T 4eso_A 146 -------------H----PGMSVYSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPT 189 (255)
T ss_dssp -------------C----TTBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSS
T ss_pred -------------C----CCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCcc
Confidence 0 1122232222 111 1 3458999999999998874
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A | Back alignment and structure |
|---|
Probab=99.68 E-value=1.7e-16 Score=128.93 Aligned_cols=162 Identities=17% Similarity=0.022 Sum_probs=108.4
Q ss_pred ccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC----CCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW----FPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~----~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
|....+|++|||||+|+||++++++|+ ++|++|++++|+..... .....+. ++.+|++|++++.++++.+
T Consensus 22 m~~l~gk~vlVTGas~gIG~aia~~la-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~Dv~d~~~v~~~~~~~ 95 (266)
T 3grp_A 22 MFKLTGRKALVTGATGGIGEAIARCFH-----AQGAIVGLHGTREDKLKEIAADLGKDVF-VFSANLSDRKSIKQLAEVA 95 (266)
T ss_dssp TTCCTTCEEEESSTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHCSSEE-EEECCTTSHHHHHHHHHHH
T ss_pred hhccCCCEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHhCCceE-EEEeecCCHHHHHHHHHHH
Confidence 334457899999999999999999999 69999999999765311 0135678 9999999999888877654
Q ss_pred cc---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCcccc
Q 028258 80 SQ---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLA 147 (211)
Q Consensus 80 ~~---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~ 147 (211)
.. .+|++||+|+... .++...+++|+.++.++.+++...+. ..+..+|+++||...+.+.
T Consensus 96 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~-~~~~g~Iv~isS~~~~~~~------- 167 (266)
T 3grp_A 96 EREMEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMM-RRRYGRIINITSIVGVVGN------- 167 (266)
T ss_dssp HHHHTSCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHTCEEEEEECCC-------------
T ss_pred HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCcEEEEECCHHHcCCC-------
Confidence 21 3899999998643 14566788999996666665543210 0034688888885443210
Q ss_pred CCCCCCCCCCcCCCCCCCCCCcchhHHHH-----Hhh-----cCCCceEEEecCCceEec
Q 028258 148 GQLMPYEVPFKEDSSRLPFPNFYYELEDV-----SAS-----YSPAITYSVHRSSVIIGA 197 (211)
Q Consensus 148 g~~~~~~~~~~e~~~~~~~~~~~~~~e~~-----l~~-----~~~~~~~~i~Rp~~i~G~ 197 (211)
+....|...|. .+. ...++++..++|+.+..+
T Consensus 168 ------------------~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~ 209 (266)
T 3grp_A 168 ------------------PGQTNYCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSA 209 (266)
T ss_dssp -------------------CHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSH
T ss_pred ------------------CCchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCc
Confidence 11112332221 111 346899999999999875
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.68 E-value=4.3e-16 Score=125.74 Aligned_cols=125 Identities=11% Similarity=-0.050 Sum_probs=92.9
Q ss_pred CCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC-------CCCCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 6 QNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-------WFPTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 6 ~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~-------~~~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
.+++|++|||||+|+||++++++|+ ++|++|++++|++... .....++. ++.+|++|++++.++++.
T Consensus 3 ~l~~k~vlVTGas~gIG~aia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~v~~~~~~ 76 (257)
T 3imf_A 3 AMKEKVVIITGGSSGMGKGMATRFA-----KEGARVVITGRTKEKLEEAKLEIEQFPGQIL-TVQMDVRNTDDIQKMIEQ 76 (257)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHCCSTTCEE-EEECCTTCHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEE-EEEccCCCHHHHHHHHHH
Confidence 3457899999999999999999999 6899999999976531 11235678 899999999988888775
Q ss_pred ccc---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCee
Q 028258 79 ISQ---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKH 136 (211)
Q Consensus 79 ~~~---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~ 136 (211)
+.. .+|++||+|+... .++...+++|+.++.++++++...+.......+|+++||...
T Consensus 77 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~ 146 (257)
T 3imf_A 77 IDEKFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYA 146 (257)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGG
T ss_pred HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhh
Confidence 521 3899999998532 245667899999999988887543100112457888877543
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.67 E-value=3.1e-16 Score=127.34 Aligned_cols=122 Identities=14% Similarity=-0.013 Sum_probs=91.0
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----C---CCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----F---PTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----~---~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
.++|++|||||+|+||++++++|+ ++|++|++++|++.... . ....+. ++.+|++|++++.++++.
T Consensus 19 l~~k~~lVTGas~gIG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~-~~~~Dl~~~~~v~~~~~~ 92 (267)
T 1vl8_A 19 LRGRVALVTGGSRGLGFGIAQGLA-----EAGCSVVVASRNLEEASEAAQKLTEKYGVETM-AFRCDVSNYEEVKKLLEA 92 (267)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHHHHHCCCEE-EEECCTTCHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEE-EEEcCCCCHHHHHHHHHH
Confidence 356899999999999999999999 68999999999754310 0 124577 889999999988887765
Q ss_pred ccc---ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 79 ISQ---EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 79 ~~~---~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
+.. .+|++||+|+.... .+...+++|+.++.++++++...+. ..+..+|+++||..
T Consensus 93 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~-~~~~g~iv~isS~~ 160 (267)
T 1vl8_A 93 VKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLR-ESDNPSIINIGSLT 160 (267)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHT-TCSSCEEEEECCGG
T ss_pred HHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-HcCCcEEEEECCcc
Confidence 421 28999999986421 3456778999999998887754321 11357888888753
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.67 E-value=1.4e-16 Score=128.99 Aligned_cols=122 Identities=11% Similarity=-0.044 Sum_probs=91.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC--CCCCCceeEEEeeCCCHHHHHHHHHhccc---c
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW--FPTALVDRYITFDALDPTDTALKLSLISQ---E 82 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~--~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~---~ 82 (211)
.+|++|||||+|+||++++++|+ ++|++|++++|++.+.. ....++. ++.+|++|++++.++++.+.. .
T Consensus 26 ~~k~vlVTGas~gIG~aia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~Dv~~~~~v~~~~~~~~~~~g~ 99 (260)
T 3gem_A 26 SSAPILITGASQRVGLHCALRLL-----EHGHRVIISYRTEHASVTELRQAGAV-ALYGDFSCETGIMAFIDLLKTQTSS 99 (260)
T ss_dssp -CCCEEESSTTSHHHHHHHHHHH-----HTTCCEEEEESSCCHHHHHHHHHTCE-EEECCTTSHHHHHHHHHHHHHHCSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-----HCCCEEEEEeCChHHHHHHHHhcCCe-EEECCCCCHHHHHHHHHHHHHhcCC
Confidence 46899999999999999999999 68999999999876421 1123478 999999999988887765421 3
Q ss_pred cceEEeecccCCc--------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCee
Q 028258 83 ITNLFWVPLQVQE--------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKH 136 (211)
Q Consensus 83 ~~~v~~~a~~~~~--------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~ 136 (211)
+|++||+|+.... ++...+++|+.++.++++++...+... +..+|+++||...
T Consensus 100 iD~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~-~~g~iv~isS~~~ 160 (260)
T 3gem_A 100 LRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTAS-EVADIVHISDDVT 160 (260)
T ss_dssp CSEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTS-SSCEEEEECCGGG
T ss_pred CCEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcEEEEECChhh
Confidence 8999999986321 344678999999999888876543111 3467888887543
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.67 E-value=3.8e-16 Score=127.52 Aligned_cols=123 Identities=15% Similarity=-0.064 Sum_probs=91.6
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
..+|++|||||+|+||++++++|+ ++|++|++++|+..... ....++. ++.+|++|++++.++++.+
T Consensus 30 l~gk~~lVTGas~GIG~aia~~la-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~v~~~~~~~ 103 (276)
T 3r1i_A 30 LSGKRALITGASTGIGKKVALAYA-----EAGAQVAVAARHSDALQVVADEIAGVGGKAL-PIRCDVTQPDQVRGMLDQM 103 (276)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHH-----HTTCEEEEEESSGGGGHHHHHHHHHTTCCCE-EEECCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCeEE-EEEcCCCCHHHHHHHHHHH
Confidence 357899999999999999999999 68999999999765421 0134678 8999999999988887754
Q ss_pred cc---ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 80 SQ---EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 80 ~~---~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
.. .+|++||+|+.... ++...+++|+.++.++++++...+.....-.+|+++||..
T Consensus 104 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~ 171 (276)
T 3r1i_A 104 TGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMS 171 (276)
T ss_dssp HHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGG
T ss_pred HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchH
Confidence 21 28999999987431 3455678999999888887765421011125778887754
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.67 E-value=6.7e-17 Score=133.30 Aligned_cols=163 Identities=9% Similarity=-0.037 Sum_probs=110.6
Q ss_pred cccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----C--CCC---CceeEEEeeCCCHHHH
Q 028258 3 KQDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----F--PTA---LVDRYITFDALDPTDT 72 (211)
Q Consensus 3 ~~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----~--~~~---~~~~~i~~Dl~d~~~~ 72 (211)
.|+.+.+|++|||||+|+||++++++|+ ++|++|++++|++.+.. . ... ++. ++.+|++|++++
T Consensus 20 ~m~~l~~k~vlVTGas~gIG~aia~~L~-----~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~-~~~~Dv~d~~~v 93 (297)
T 1xhl_A 20 HMARFSGKSVIITGSSNGIGRSAAVIFA-----KEGAQVTITGRNEDRLEETKQQILKAGVPAEKIN-AVVADVTEASGQ 93 (297)
T ss_dssp ---CCTTCEEEETTCSSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEE-EEECCTTSHHHH
T ss_pred cccCCCCCEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEE-EEecCCCCHHHH
Confidence 3444557899999999999999999999 68999999999764310 0 012 678 899999999988
Q ss_pred HHHHHhccc---ccceEEeecccCC-----------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeee
Q 028258 73 ALKLSLISQ---EITNLFWVPLQVQ-----------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYM 138 (211)
Q Consensus 73 ~~~~~~~~~---~~~~v~~~a~~~~-----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~ 138 (211)
.++++.+.. .+|.+||+|+... .++...+++|+.++.++++++...+... + .+|+++||...+.
T Consensus 94 ~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~-g~IV~isS~~~~~ 171 (297)
T 1xhl_A 94 DDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKT-K-GEIVNVSSIVAGP 171 (297)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-T-CEEEEECCGGGSS
T ss_pred HHHHHHHHHhcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc-C-CEEEEEcCchhcc
Confidence 877765421 2899999998532 1345678999999988888877542101 2 6888888754432
Q ss_pred cccCCccccCCCCCCCCCCcCCCCCCCCCCcchhHHH-----HHhh-----cCCCceEEEecCCceEec
Q 028258 139 GPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELED-----VSAS-----YSPAITYSVHRSSVIIGA 197 (211)
Q Consensus 139 ~~~~~~~~~g~~~~~~~~~~e~~~~~~~~~~~~~~e~-----~l~~-----~~~~~~~~i~Rp~~i~G~ 197 (211)
. . . +....|...| +.+. ...++++.++||+.+.++
T Consensus 172 ~---------------~-----~----~~~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~ 216 (297)
T 1xhl_A 172 Q---------------A-----H----SGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATG 216 (297)
T ss_dssp S---------------C-----C----TTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSS
T ss_pred C---------------C-----C----CCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCc
Confidence 1 0 0 1112232222 1111 346899999999999875
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.67 E-value=4.1e-15 Score=121.78 Aligned_cols=122 Identities=15% Similarity=0.011 Sum_probs=94.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCC--------------CCCCceeEEEeeCCCHHHHH
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF--------------PTALVDRYITFDALDPTDTA 73 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~--------------~~~~~~~~i~~Dl~d~~~~~ 73 (211)
.+|++|||||+|+||++++++|+ ++|++|++++|+..+... ....+. ++.+|++|++++.
T Consensus 8 ~~k~vlVTGas~GIG~aia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~v~ 81 (285)
T 3sc4_A 8 RGKTMFISGGSRGIGLAIAKRVA-----ADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQAL-PIVGDIRDGDAVA 81 (285)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHH-----TTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEE-EEECCTTSHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-----HCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEE-EEECCCCCHHHHH
Confidence 46899999999999999999999 689999999998764210 124678 8999999999888
Q ss_pred HHHHhccc---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCee
Q 028258 74 LKLSLISQ---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKH 136 (211)
Q Consensus 74 ~~~~~~~~---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~ 136 (211)
++++.+.. .+|++||+|+... .++...+++|+.++.++++++...+... +..+|+++||...
T Consensus 82 ~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~iv~isS~~~ 155 (285)
T 3sc4_A 82 AAVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGR-DNPHILTLSPPIR 155 (285)
T ss_dssp HHHHHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTS-SSCEEEECCCCCC
T ss_pred HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEECChhh
Confidence 87765521 3899999998642 1355677899999999999887764211 3468888887543
|
| >2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=4.9e-16 Score=126.50 Aligned_cols=161 Identities=8% Similarity=-0.109 Sum_probs=111.7
Q ss_pred ccCCCCCeEEEEcCC--ChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC----C--CCCCceeEEEeeCCCHHHHHHH
Q 028258 4 QDQNPKSVALIIGVT--GISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW----F--PTALVDRYITFDALDPTDTALK 75 (211)
Q Consensus 4 ~~~~~~~~ilVtGat--G~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~----~--~~~~~~~~i~~Dl~d~~~~~~~ 75 (211)
|..+.+|++|||||+ |+||++++++|+ ++|++|++++|++.... . ..+.+. ++.+|++|++++.++
T Consensus 1 M~~l~~k~vlVTGas~~~gIG~~~a~~l~-----~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~-~~~~D~~~~~~v~~~ 74 (275)
T 2pd4_A 1 MGFLKGKKGLIVGVANNKSIAYGIAQSCF-----NQGATLAFTYLNESLEKRVRPIAQELNSPY-VYELDVSKEEHFKSL 74 (275)
T ss_dssp -CTTTTCEEEEECCCSTTSHHHHHHHHHH-----TTTCEEEEEESSTTTHHHHHHHHHHTTCCC-EEECCTTCHHHHHHH
T ss_pred CCCCCCCEEEEECCCCCCcHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCcE-EEEcCCCCHHHHHHH
Confidence 344556899999999 999999999999 68999999999864100 0 013478 999999999988887
Q ss_pred HHhccc---ccceEEeecccCC-------------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeec
Q 028258 76 LSLISQ---EITNLFWVPLQVQ-------------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMG 139 (211)
Q Consensus 76 ~~~~~~---~~~~v~~~a~~~~-------------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~ 139 (211)
++.+.. .+|++||+|+... .++...+++|+.++.++++++...+. +-.+|+++||...+..
T Consensus 75 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~---~~g~iv~isS~~~~~~ 151 (275)
T 2pd4_A 75 YNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLN---NGASVLTLSYLGSTKY 151 (275)
T ss_dssp HHHHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEE---EEEEEEEEECGGGTSB
T ss_pred HHHHHHHcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhc---cCCEEEEEecchhcCC
Confidence 765421 3899999998642 13456789999999999999877521 1257888887433210
Q ss_pred ccCCccccCCCCCCCCCCcCCCCCCCCCCcchhHHH-----HHhh-----cCCCceEEEecCCceEecC
Q 028258 140 PIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELED-----VSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 140 ~~~~~~~~g~~~~~~~~~~e~~~~~~~~~~~~~~e~-----~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
. +....|...| +.+. ...++.+..++|+.+.++-
T Consensus 152 ---------------------~----~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~ 195 (275)
T 2pd4_A 152 ---------------------M----AHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLA 195 (275)
T ss_dssp ---------------------C----TTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTT
T ss_pred ---------------------C----CCchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccch
Confidence 0 0111232222 1111 3568999999999998863
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.67 E-value=2e-16 Score=126.76 Aligned_cols=123 Identities=13% Similarity=-0.018 Sum_probs=89.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeC-CCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAAR-RPPPGW-------FPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R-~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
++|++|||||||+||++++++|+ ++|++|++++| ++.+.. ....++. ++.+|++|++++.+.++.+
T Consensus 3 ~~k~vlVTGas~giG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~ 76 (246)
T 2uvd_A 3 KGKVALVTGASRGIGRAIAIDLA-----KQGANVVVNYAGNEQKANEVVDEIKKLGSDAI-AVRADVANAEDVTNMVKQT 76 (246)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHH-----HTTCEEEEEESSCHHHHHHHHHHHHHTTCCEE-EEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHH-----HCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEE-EEEcCCCCHHHHHHHHHHH
Confidence 46899999999999999999999 68999999998 433210 0134678 8999999999888877654
Q ss_pred cc---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeee
Q 028258 80 SQ---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 137 (211)
Q Consensus 80 ~~---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y 137 (211)
.. .+|++||+|+... .++...+++|+.++.++++++...+. ..+..+|+++||...+
T Consensus 77 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~-~~~~g~iv~isS~~~~ 145 (246)
T 2uvd_A 77 VDVFGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMM-RQRHGRIVNIASVVGV 145 (246)
T ss_dssp HHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHTCEEEEEECCTHHH
T ss_pred HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-HcCCcEEEEECCHHhc
Confidence 21 2899999998642 13556789999997766665543210 0135788998886443
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=99.67 E-value=6.2e-16 Score=122.59 Aligned_cols=119 Identities=18% Similarity=0.110 Sum_probs=92.0
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC----CCCCCceeEEEeeCCCHHHHHHHHHhcccccce
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW----FPTALVDRYITFDALDPTDTALKLSLISQEITN 85 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~----~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~ 85 (211)
|++|||||+|+||++++++|+ ++|++|++++|++.... ....++. ++.+|++|++++.+.++.+....|.
T Consensus 2 k~vlVTGas~gIG~~~a~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~D~~~~~~v~~~~~~~~~~~d~ 75 (230)
T 3guy_A 2 SLIVITGASSGLGAELAKLYD-----AEGKATYLTGRSESKLSTVTNCLSNNVG-YRARDLASHQEVEQLFEQLDSIPST 75 (230)
T ss_dssp -CEEEESTTSHHHHHHHHHHH-----HTTCCEEEEESCHHHHHHHHHTCSSCCC-EEECCTTCHHHHHHHHHSCSSCCSE
T ss_pred CEEEEecCCchHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHhhccC-eEeecCCCHHHHHHHHHHHhhcCCE
Confidence 789999999999999999999 68999999999865311 1235788 9999999999999999887644689
Q ss_pred EEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCee
Q 028258 86 LFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKH 136 (211)
Q Consensus 86 v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~ 136 (211)
+||+|+... .++...+++|+.++.++++++...+.... .+|+++||...
T Consensus 76 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~--~~iv~isS~~~ 133 (230)
T 3guy_A 76 VVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQP--VNVVMIMSTAA 133 (230)
T ss_dssp EEECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC--CEEEEECCGGG
T ss_pred EEEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--CeEEEEeeccc
Confidence 999998632 13556789999999999988876532121 27788877543
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.67 E-value=3.2e-16 Score=125.53 Aligned_cols=158 Identities=13% Similarity=-0.014 Sum_probs=109.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC----CCCCCceeEEEeeCCCHHHHHHHHHhccccc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW----FPTALVDRYITFDALDPTDTALKLSLISQEI 83 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~----~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~ 83 (211)
.+|++|||||+|+||++++++|+ ++|++|++++|+..... .....+. ++.+|++|.+++.+.++.... +
T Consensus 13 ~~k~vlVTGas~gIG~~~a~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~-i 85 (249)
T 3f9i_A 13 TGKTSLITGASSGIGSAIARLLH-----KLGSKVIISGSNEEKLKSLGNALKDNYT-IEVCNLANKEECSNLISKTSN-L 85 (249)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHCSSEE-EEECCTTSHHHHHHHHHTCSC-C
T ss_pred CCCEEEEECCCChHHHHHHHHHH-----HCCCEEEEEcCCHHHHHHHHHHhccCcc-EEEcCCCCHHHHHHHHHhcCC-C
Confidence 57899999999999999999999 68999999999765311 0125678 899999999999999987754 8
Q ss_pred ceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCC
Q 028258 84 TNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYE 154 (211)
Q Consensus 84 ~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~ 154 (211)
|++||+|+... .++...+++|+.++.++++++...+. ..+..+|+++||...|...
T Consensus 86 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~-~~~~g~iv~isS~~~~~~~-------------- 150 (249)
T 3f9i_A 86 DILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMI-QKRYGRIINISSIVGIAGN-------------- 150 (249)
T ss_dssp SEEEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHH-HHTCEEEEEECCCCC--CC--------------
T ss_pred CEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCcEEEEEccHHhccCC--------------
Confidence 99999998632 24567789999998888877654310 0134688888886544210
Q ss_pred CCCcCCCCCCCCCCcchhHHHH-----Hhh-----cCCCceEEEecCCceEecC
Q 028258 155 VPFKEDSSRLPFPNFYYELEDV-----SAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 155 ~~~~e~~~~~~~~~~~~~~e~~-----l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
+....|...|. .+. ...++.+..++|+.+.++-
T Consensus 151 -----------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 193 (249)
T 3f9i_A 151 -----------PGQANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDM 193 (249)
T ss_dssp -----------SCSHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC---
T ss_pred -----------CCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCccccCc
Confidence 11122332222 111 3468999999999998764
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.67 E-value=5.5e-16 Score=126.86 Aligned_cols=161 Identities=12% Similarity=-0.020 Sum_probs=111.7
Q ss_pred CCCCeEEEEcCC--ChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC----CC--CCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 7 NPKSVALIIGVT--GISGLSLAEALKNPTTPGSPWKVYGAARRPPPG----WF--PTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 7 ~~~~~ilVtGat--G~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~----~~--~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
+.+|++|||||+ |+||++++++|+ ++|++|++++|++... .. ..+.+. ++.+|++|++++.++++.
T Consensus 19 l~~k~vlVTGas~~~gIG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~-~~~~Dl~~~~~v~~~~~~ 92 (285)
T 2p91_A 19 LEGKRALITGVANERSIAYGIAKSFH-----REGAQLAFTYATPKLEKRVREIAKGFGSDL-VVKCDVSLDEDIKNLKKF 92 (285)
T ss_dssp TTTCEEEECCCSSTTSHHHHHHHHHH-----HTTCEEEEEESSGGGHHHHHHHHHHTTCCC-EEECCTTCHHHHHHHHHH
T ss_pred cCCCEEEEECCCCCCcHHHHHHHHHH-----HcCCEEEEEeCCHHHHHHHHHHHHhcCCeE-EEEcCCCCHHHHHHHHHH
Confidence 446899999999 999999999999 6899999999976310 00 013477 899999999988887765
Q ss_pred ccc---ccceEEeecccCC-------------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccC
Q 028258 79 ISQ---EITNLFWVPLQVQ-------------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIF 142 (211)
Q Consensus 79 ~~~---~~~~v~~~a~~~~-------------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~ 142 (211)
+.. .+|++||+|+... .++...+++|+.++.++++++...+.. +-.+|+++||...+..
T Consensus 93 ~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~~g~iv~isS~~~~~~--- 167 (285)
T 2p91_A 93 LEENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEG--RNGAIVTLSYYGAEKV--- 167 (285)
T ss_dssp HHHHTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTT--SCCEEEEEECGGGTSB---
T ss_pred HHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH--cCCEEEEEccchhccC---
Confidence 421 2899999998642 134567899999999999998876311 1268888887543311
Q ss_pred CccccCCCCCCCCCCcCCCCCCCCCCcchh----HHHHHhh-----cCCCceEEEecCCceEecCC
Q 028258 143 DPSLAGQLMPYEVPFKEDSSRLPFPNFYYE----LEDVSAS-----YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 143 ~~~~~g~~~~~~~~~~e~~~~~~~~~~~~~----~e~~l~~-----~~~~~~~~i~Rp~~i~G~~~ 199 (211)
. +....|.. .+.+.+. ...++.+.+++|+.+.++..
T Consensus 168 ------------------~---~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~ 212 (285)
T 2p91_A 168 ------------------V---PHYNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAA 212 (285)
T ss_dssp ------------------C---TTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC
T ss_pred ------------------C---CCccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchh
Confidence 0 01112222 1211111 34689999999999998753
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=4.7e-16 Score=127.16 Aligned_cols=157 Identities=13% Similarity=-0.062 Sum_probs=111.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC-C-------CCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-W-------FPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~-~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
++|++|||||+|+||++++++|+ ++|++|++++|+.... . ....++. ++.+|++|.+++.+.++.+
T Consensus 28 ~~k~vlVTGas~gIG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~ 101 (283)
T 1g0o_A 28 EGKVALVTGAGRGIGREMAMELG-----RRGCKVIVNYANSTESAEEVVAAIKKNGSDAA-CVKANVGVVEDIVRMFEEA 101 (283)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHH-----HTTCEEEEEESSCHHHHHHHHHHHHHTTCCEE-EEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEeCCchHHHHHHHHHHHHhCCCeE-EEEcCCCCHHHHHHHHHHH
Confidence 46899999999999999999999 6899999999976421 0 0134678 8999999999887777654
Q ss_pred cc---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCcccc
Q 028258 80 SQ---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLA 147 (211)
Q Consensus 80 ~~---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~ 147 (211)
.. .+|++||+|+... .++...+++|+.++.++++++...+ .+..+|+++||...+..
T Consensus 102 ~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~---~~~g~iv~isS~~~~~~-------- 170 (283)
T 1g0o_A 102 VKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHL---EIGGRLILMGSITGQAK-------- 170 (283)
T ss_dssp HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHS---CTTCEEEEECCGGGTCS--------
T ss_pred HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHH---hcCCeEEEEechhhccC--------
Confidence 21 2899999998642 1455678999999999999988763 13468888887533210
Q ss_pred CCCCCCCCCCcCCCCCCCCCCcchhHHH-----HHhh-----cCCCceEEEecCCceEec
Q 028258 148 GQLMPYEVPFKEDSSRLPFPNFYYELED-----VSAS-----YSPAITYSVHRSSVIIGA 197 (211)
Q Consensus 148 g~~~~~~~~~~e~~~~~~~~~~~~~~e~-----~l~~-----~~~~~~~~i~Rp~~i~G~ 197 (211)
. +.+...|...| +.+. ...++++.+++|+.+.++
T Consensus 171 -------------~---~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~ 214 (283)
T 1g0o_A 171 -------------A---VPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTD 214 (283)
T ss_dssp -------------S---CSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSH
T ss_pred -------------C---CCCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccch
Confidence 0 01122233222 1111 346899999999999876
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.67 E-value=5.8e-15 Score=124.31 Aligned_cols=123 Identities=11% Similarity=0.003 Sum_probs=94.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCC--------------CCCCceeEEEeeCCCHHHHH
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF--------------PTALVDRYITFDALDPTDTA 73 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~--------------~~~~~~~~i~~Dl~d~~~~~ 73 (211)
.+|++|||||+|+||++++++|+ ++|++|++++|+..+... ....+. ++.+|++|++++.
T Consensus 44 ~gk~vlVTGas~GIG~aia~~La-----~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~-~~~~Dv~d~~~v~ 117 (346)
T 3kvo_A 44 AGCTVFITGASRGIGKAIALKAA-----KDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKAL-PCIVDVRDEQQIS 117 (346)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHH-----TTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEE-EEECCTTCHHHHH
T ss_pred CCCEEEEeCCChHHHHHHHHHHH-----HCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEE-EEEccCCCHHHHH
Confidence 47899999999999999999999 689999999998764210 124577 8899999999888
Q ss_pred HHHHhccc---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeee
Q 028258 74 LKLSLISQ---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 137 (211)
Q Consensus 74 ~~~~~~~~---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y 137 (211)
++++.+.. .+|++||+|+... ..+...+++|+.++.++++++...+... +..+|+++||...+
T Consensus 118 ~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~~g~IV~iSS~~~~ 192 (346)
T 3kvo_A 118 AAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKS-KVAHILNISPPLNL 192 (346)
T ss_dssp HHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTC-SSCEEEEECCCCCC
T ss_pred HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC-CCCEEEEECCHHHc
Confidence 88775521 3899999998632 1456678999999999999886543211 34688888885543
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.67 E-value=7.1e-16 Score=125.62 Aligned_cols=166 Identities=12% Similarity=-0.032 Sum_probs=112.9
Q ss_pred CCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------------------CCCCCceeEEEeeC
Q 028258 6 QNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------------------FPTALVDRYITFDA 66 (211)
Q Consensus 6 ~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------------------~~~~~~~~~i~~Dl 66 (211)
...+|++|||||+|+||++++++|+ ++|++|++++|+..... .....+. ++.+|+
T Consensus 10 ~l~gk~vlVTGas~gIG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~D~ 83 (278)
T 3sx2_A 10 PLTGKVAFITGAARGQGRAHAVRLA-----ADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIV-ARQADV 83 (278)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHH-----HTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEE-EEECCT
T ss_pred CCCCCEEEEECCCChHHHHHHHHHH-----HCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEE-EEeCCC
Confidence 3457899999999999999999999 69999999998732100 0124678 899999
Q ss_pred CCHHHHHHHHHhccc---ccceEEeecccCC-----chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeee
Q 028258 67 LDPTDTALKLSLISQ---EITNLFWVPLQVQ-----ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYM 138 (211)
Q Consensus 67 ~d~~~~~~~~~~~~~---~~~~v~~~a~~~~-----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~ 138 (211)
+|++++.++++.+.. .+|++||+|+... .++...+++|+.++.++++++...+.....-.+|+++||...+.
T Consensus 84 ~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~ 163 (278)
T 3sx2_A 84 RDRESLSAALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLA 163 (278)
T ss_dssp TCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTS
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcC
Confidence 999988888765421 2899999998743 24567789999999999888765421011235788888754432
Q ss_pred cccCCccccCCCCCCCCCCcCCCCCCCCCCcchhHHHH-----Hhh-----cCCCceEEEecCCceEecC
Q 028258 139 GPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDV-----SAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 139 ~~~~~~~~~g~~~~~~~~~~e~~~~~~~~~~~~~~e~~-----l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
+ .. .+ .+....|...|. .+. ...++.+..++|+.+.++-
T Consensus 164 ~-----------------~~--~~--~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~ 212 (278)
T 3sx2_A 164 G-----------------VG--SA--DPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPM 212 (278)
T ss_dssp C-----------------CC--CS--SHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTT
T ss_pred C-----------------Cc--cC--CCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCcc
Confidence 1 00 00 011222332221 111 3468999999999998864
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=8.3e-16 Score=124.58 Aligned_cols=128 Identities=17% Similarity=0.047 Sum_probs=93.9
Q ss_pred CccccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC---------CCCCCceeEEEeeCCCHHH
Q 028258 1 MEKQDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW---------FPTALVDRYITFDALDPTD 71 (211)
Q Consensus 1 ~~~~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~---------~~~~~~~~~i~~Dl~d~~~ 71 (211)
|.+|. ..+|++|||||+|+||++++++|+ ++|++|++++|++.+.. .....+. ++.+|++|+++
T Consensus 1 M~~~~-l~~k~~lVTGas~GIG~aia~~l~-----~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~-~~~~Dv~~~~~ 73 (265)
T 3lf2_A 1 MKPYD-LSEAVAVVTGGSSGIGLATVELLL-----EAGAAVAFCARDGERLRAAESALRQRFPGARLF-ASVCDVLDALQ 73 (265)
T ss_dssp --CCC-CTTCEEEEETCSSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEE-EEECCTTCHHH
T ss_pred CCccC-cCCCEEEEeCCCChHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEE-EEeCCCCCHHH
Confidence 44443 346899999999999999999999 68999999999765310 1123478 89999999998
Q ss_pred HHHHHHhccc---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCee
Q 028258 72 TALKLSLISQ---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKH 136 (211)
Q Consensus 72 ~~~~~~~~~~---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~ 136 (211)
+.+.++.+.. .+|++||+|+... .++...+++|+.++.++++++...+... +-.+|+++||...
T Consensus 74 v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~ 149 (265)
T 3lf2_A 74 VRAFAEACERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESR-ADAAIVCVNSLLA 149 (265)
T ss_dssp HHHHHHHHHHHHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTS-TTEEEEEEEEGGG
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-CCeEEEEECCccc
Confidence 8887765421 3899999998632 1456678999999999999886543111 3467888887543
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.67 E-value=1.8e-16 Score=128.91 Aligned_cols=125 Identities=12% Similarity=-0.053 Sum_probs=91.3
Q ss_pred CCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 6 QNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 6 ~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
.+++|++|||||+|+||++++++|+ +.|++|++++|++.... ....+++ ++.+|++|++++.++++.
T Consensus 28 ~l~~k~vlITGasggIG~~la~~L~-----~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~-~~~~Dl~~~~~v~~~~~~ 101 (272)
T 1yb1_A 28 SVTGEIVLITGAGHGIGRLTAYEFA-----KLKSKLVLWDINKHGLEETAAKCKGLGAKVH-TFVVDCSNREDIYSSAKK 101 (272)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHHHTTCCEE-EEECCTTCHHHHHHHHHH
T ss_pred ccCCCEEEEECCCchHHHHHHHHHH-----HCCCEEEEEEcCHHHHHHHHHHHHhcCCeEE-EEEeeCCCHHHHHHHHHH
Confidence 3456899999999999999999999 68999999999764311 0134678 999999999988887765
Q ss_pred ccc---ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeee
Q 028258 79 ISQ---EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 137 (211)
Q Consensus 79 ~~~---~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y 137 (211)
+.. .+|.|||+|+.... ++...+++|+.++.++++++...+. ..+..+|+++||...|
T Consensus 102 ~~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-~~~~~~iv~isS~~~~ 171 (272)
T 1yb1_A 102 VKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMT-KNNHGHIVTVASAAGH 171 (272)
T ss_dssp HHHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHH-HTTCEEEEEECCCC-C
T ss_pred HHHHCCCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-hcCCCEEEEEechhhc
Confidence 421 28999999986431 3345678999997777776643210 0145788999886554
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} | Back alignment and structure |
|---|
Probab=99.67 E-value=4.8e-16 Score=126.52 Aligned_cols=118 Identities=14% Similarity=0.002 Sum_probs=88.8
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCC-------CCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF-------PTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~-------~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
+++|++|||||+|+||++++++|+ ++|++|++++|++..... ....+. ++.+|++|++++.++++.+
T Consensus 32 l~~k~vlITGasggIG~~la~~L~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~ 105 (279)
T 3ctm_A 32 LKGKVASVTGSSGGIGWAVAEAYA-----QAGADVAIWYNSHPADEKAEHLQKTYGVHSK-AYKCNISDPKSVEETISQQ 105 (279)
T ss_dssp CTTCEEEETTTTSSHHHHHHHHHH-----HHTCEEEEEESSSCCHHHHHHHHHHHCSCEE-EEECCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCcce-EEEeecCCHHHHHHHHHHH
Confidence 456899999999999999999999 689999999998654210 024678 8999999999888887664
Q ss_pred cc---ccceEEeecccCCc-----------hhHHHHhhcHHH----HHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 80 SQ---EITNLFWVPLQVQE-----------SEEVNIFKNSTM----LKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 80 ~~---~~~~v~~~a~~~~~-----------~~~~~~~~n~~~----~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
.. .+|+|||+|+.... ++...+++|+.+ ++++++.+.+. +..+|+++||..
T Consensus 106 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~~~iv~isS~~ 174 (279)
T 3ctm_A 106 EKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKN-----GKGSLIITSSIS 174 (279)
T ss_dssp HHHHSCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCCEEEEECCCT
T ss_pred HHHhCCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCCeEEEECchH
Confidence 21 28999999975321 234567889988 45666666654 457888888754
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A | Back alignment and structure |
|---|
Probab=99.67 E-value=2.6e-16 Score=125.52 Aligned_cols=159 Identities=13% Similarity=0.065 Sum_probs=106.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcc---cccc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLIS---QEIT 84 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~---~~~~ 84 (211)
|+|++|||||||+||++++++|+ ++|++|++++|++.+.. ..-++. ++.+|++| +++.+.++.+. ..+|
T Consensus 1 ~~k~vlVTGas~giG~~~a~~l~-----~~G~~V~~~~r~~~~~~-~~~~~~-~~~~D~~~-~~~~~~~~~~~~~~g~id 72 (239)
T 2ekp_A 1 MERKALVTGGSRGIGRAIAEALV-----ARGYRVAIASRNPEEAA-QSLGAV-PLPTDLEK-DDPKGLVKRALEALGGLH 72 (239)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESSCHHHH-HHHTCE-EEECCTTT-SCHHHHHHHHHHHHTSCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEeCCHHHHH-HhhCcE-EEecCCch-HHHHHHHHHHHHHcCCCC
Confidence 35899999999999999999999 68999999999865311 011367 89999999 76666554321 1289
Q ss_pred eEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCC
Q 028258 85 NLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEV 155 (211)
Q Consensus 85 ~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~ 155 (211)
++||+|+... .++...+++|+.++.++++++...+. ..+..+|+++||...|...
T Consensus 73 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~-~~~~g~iv~isS~~~~~~~--------------- 136 (239)
T 2ekp_A 73 VLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMA-EAGWGRVLFIGSVTTFTAG--------------- 136 (239)
T ss_dssp EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHTCEEEEEECCGGGTSCC---------------
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-HcCCcEEEEECchhhccCC---------------
Confidence 9999998632 14556789999998888887753210 0135789999886544210
Q ss_pred CCcCCCCCCCCCCcchhHHH-----HHhh-----cCCCceEEEecCCceEecC
Q 028258 156 PFKEDSSRLPFPNFYYELED-----VSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 156 ~~~e~~~~~~~~~~~~~~e~-----~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
+ +++...|...| +.+. ...++++.++||+.+.++.
T Consensus 137 ~--------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 181 (239)
T 2ekp_A 137 G--------PVPIPAYTTAKTALLGLTRALAKEWARLGIRVNLLCPGYVETEF 181 (239)
T ss_dssp T--------TSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGG
T ss_pred C--------CCCCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCccCch
Confidence 0 01122232222 1111 3468999999999998763
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=99.66 E-value=4.4e-16 Score=125.67 Aligned_cols=123 Identities=11% Similarity=-0.050 Sum_probs=92.7
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
..+|++|||||+|+||++++++|+ ++|++|++++|+..... .....+. ++.+|++|++++.+.++.+
T Consensus 10 l~~k~vlVTGas~gIG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~Dv~d~~~v~~~~~~~ 83 (256)
T 3gaf_A 10 LNDAVAIVTGAAAGIGRAIAGTFA-----KAGASVVVTDLKSEGAEAVAAAIRQAGGKAI-GLECNVTDEQHREAVIKAA 83 (256)
T ss_dssp CTTCEEEECSCSSHHHHHHHHHHH-----HHTCEEEEEESSHHHHHHHHHHHHHTTCCEE-EEECCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEE-EEECCCCCHHHHHHHHHHH
Confidence 347899999999999999999999 68999999999764311 0135678 8999999999888777654
Q ss_pred cc---ccceEEeecccCC--------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCee
Q 028258 80 SQ---EITNLFWVPLQVQ--------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKH 136 (211)
Q Consensus 80 ~~---~~~~v~~~a~~~~--------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~ 136 (211)
.. .+|++||+|+... .++...+++|+.++.++++++...+... +..+|+++||...
T Consensus 84 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv~isS~~~ 150 (256)
T 3gaf_A 84 LDQFGKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKA-GGGAILNISSMAG 150 (256)
T ss_dssp HHHHSCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEECCGGG
T ss_pred HHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEEcCHHH
Confidence 21 2899999998643 2455678999999999998875432101 3468888887543
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.66 E-value=8.7e-16 Score=124.05 Aligned_cols=124 Identities=12% Similarity=0.035 Sum_probs=92.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCC---cEEEEEeCCCCCCCC------CCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSP---WKVYGAARRPPPGWF------PTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g---~~V~~~~R~~~~~~~------~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
++|++|||||+|+||++++++|+ +.| ++|++++|+...... ...+++ ++.+|++|++++.++++.
T Consensus 20 ~~k~vlITGasggIG~~la~~L~-----~~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~-~~~~Dl~~~~~v~~~~~~ 93 (267)
T 1sny_A 20 HMNSILITGCNRGLGLGLVKALL-----NLPQPPQHLFTTCRNREQAKELEDLAKNHSNIH-ILEIDLRNFDAYDKLVAD 93 (267)
T ss_dssp CCSEEEESCCSSHHHHHHHHHHH-----TSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEE-EEECCTTCGGGHHHHHHH
T ss_pred CCCEEEEECCCCcHHHHHHHHHH-----hcCCCCcEEEEEecChhhhHHHHHhhccCCceE-EEEecCCChHHHHHHHHH
Confidence 46899999999999999999999 678 999999998764210 124688 999999999988887765
Q ss_pred ccc-----ccceEEeecccCC----------chhHHHHhhcHHHHHHHHHHHHhcCCCC------C----CceEEEEeec
Q 028258 79 ISQ-----EITNLFWVPLQVQ----------ESEEVNIFKNSTMLKNVLSVLVSSNSGR------S----RLRHVALLTG 133 (211)
Q Consensus 79 ~~~-----~~~~v~~~a~~~~----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~------~----~~~~~~~~s~ 133 (211)
+.. .+|+|||+|+... .++...+++|+.++.++++++...+... . ...+|+++||
T Consensus 94 ~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS 173 (267)
T 1sny_A 94 IEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSS 173 (267)
T ss_dssp HHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECC
T ss_pred HHHhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEec
Confidence 421 2899999998643 1345577899999999988886542000 0 0357888888
Q ss_pred Ceee
Q 028258 134 TKHY 137 (211)
Q Consensus 134 ~~~y 137 (211)
...+
T Consensus 174 ~~~~ 177 (267)
T 1sny_A 174 ILGS 177 (267)
T ss_dssp GGGC
T ss_pred cccc
Confidence 6554
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.66 E-value=3.8e-16 Score=126.54 Aligned_cols=158 Identities=14% Similarity=0.014 Sum_probs=110.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHhcc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSLIS 80 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~ 80 (211)
.+|++|||||+|+||++++++|+ ++|++|++++|+..... ....++. ++.+|++|++++.++++.+.
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~v~~~~~~~~ 83 (264)
T 3ucx_A 10 TDKVVVISGVGPALGTTLARRCA-----EQGADLVLAARTVERLEDVAKQVTDTGRRAL-SVGTDITDDAQVAHLVDETM 83 (264)
T ss_dssp TTCEEEEESCCTTHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHHHTTCCEE-EEECCTTCHHHHHHHHHHHH
T ss_pred CCcEEEEECCCcHHHHHHHHHHH-----HCcCEEEEEeCCHHHHHHHHHHHHhcCCcEE-EEEcCCCCHHHHHHHHHHHH
Confidence 46899999999999999999999 68999999999754310 1135678 99999999998888776542
Q ss_pred c---ccceEEeecccC-C---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCcccc
Q 028258 81 Q---EITNLFWVPLQV-Q---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLA 147 (211)
Q Consensus 81 ~---~~~~v~~~a~~~-~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~ 147 (211)
. .+|++||+|+.. . .++...+++|+.++.++++++...+... + .+|+++||...+..
T Consensus 84 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~-g~iv~isS~~~~~~-------- 153 (264)
T 3ucx_A 84 KAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEES-K-GAVVNVNSMVVRHS-------- 153 (264)
T ss_dssp HHTSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHH-T-CEEEEECCGGGGCC--------
T ss_pred HHcCCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-C-CEEEEECcchhccC--------
Confidence 1 389999999653 1 1455678999999999888876542101 1 47888887543321
Q ss_pred CCCCCCCCCCcCCCCCCCCCCcchhHHH-----HHh---h--cCCCceEEEecCCceEecC
Q 028258 148 GQLMPYEVPFKEDSSRLPFPNFYYELED-----VSA---S--YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 148 g~~~~~~~~~~e~~~~~~~~~~~~~~e~-----~l~---~--~~~~~~~~i~Rp~~i~G~~ 198 (211)
. +....|...| +.+ . ...++.+..++|+.+.++.
T Consensus 154 -------------~----~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~ 197 (264)
T 3ucx_A 154 -------------Q----AKYGAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGT 197 (264)
T ss_dssp -------------C----TTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHH
T ss_pred -------------C----CccHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccccc
Confidence 0 1111232222 111 1 3578999999999998763
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.66 E-value=3.8e-16 Score=127.61 Aligned_cols=159 Identities=14% Similarity=-0.026 Sum_probs=111.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC----CCCCCceeEEEeeCCCHHHHHHHHHhccc--
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW----FPTALVDRYITFDALDPTDTALKLSLISQ-- 81 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~----~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~-- 81 (211)
++|++|||||+|+||++++++|+ ++|++|++++|+..... .....+. ++.+|++|++++.+.++.+..
T Consensus 28 ~gk~vlVTGas~gIG~aia~~la-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~Dv~d~~~v~~~~~~~~~~~ 101 (277)
T 3gvc_A 28 AGKVAIVTGAGAGIGLAVARRLA-----DEGCHVLCADIDGDAADAAATKIGCGAA-ACRVDVSDEQQIIAMVDACVAAF 101 (277)
T ss_dssp TTCEEEETTTTSTHHHHHHHHHH-----HTTCEEEEEESSHHHHHHHHHHHCSSCE-EEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHcCCcce-EEEecCCCHHHHHHHHHHHHHHc
Confidence 46899999999999999999999 68999999999765311 0135678 999999999988877765421
Q ss_pred -ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCC
Q 028258 82 -EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLM 151 (211)
Q Consensus 82 -~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~ 151 (211)
.+|++||+|+... .++...+++|+.++.++++++...+... +-.+|+++||...+..
T Consensus 102 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~Iv~isS~~~~~~------------ 168 (277)
T 3gvc_A 102 GGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIER-GGGAIVNLSSLAGQVA------------ 168 (277)
T ss_dssp SSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCEEEEEECCGGGTSC------------
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEEcchhhccC------------
Confidence 2899999998632 1455678999999888888776532101 3367888887543210
Q ss_pred CCCCCCcCCCCCCCCCCcchhHHH-----HHhh-----cCCCceEEEecCCceEecC
Q 028258 152 PYEVPFKEDSSRLPFPNFYYELED-----VSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 152 ~~~~~~~e~~~~~~~~~~~~~~e~-----~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
.+....|...| +.+. ...++++..++|+.+.++.
T Consensus 169 -------------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~ 212 (277)
T 3gvc_A 169 -------------VGGTGAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPM 212 (277)
T ss_dssp -------------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred -------------CCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCch
Confidence 01122233222 1111 3468999999999998863
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} | Back alignment and structure |
|---|
Probab=99.66 E-value=6.7e-16 Score=125.34 Aligned_cols=165 Identities=12% Similarity=0.055 Sum_probs=110.3
Q ss_pred cccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC--------CCCCCCceeEEEeeCCCHHHHHH
Q 028258 3 KQDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG--------WFPTALVDRYITFDALDPTDTAL 74 (211)
Q Consensus 3 ~~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~--------~~~~~~~~~~i~~Dl~d~~~~~~ 74 (211)
++.++++|++|||||+|+||++++++|+ +.|++|++++|+.... .....++. ++.+|++|++++.+
T Consensus 19 p~~~~~~k~vlITGas~gIG~~~a~~l~-----~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~v~~ 92 (269)
T 3gk3_A 19 PGSMQAKRVAFVTGGMGGLGAAISRRLH-----DAGMAVAVSHSERNDHVSTWLMHERDAGRDFK-AYAVDVADFESCER 92 (269)
T ss_dssp -----CCCEEEETTTTSHHHHHHHHHHH-----TTTCEEEEEECSCHHHHHHHHHHHHTTTCCCE-EEECCTTCHHHHHH
T ss_pred chhhhcCCEEEEECCCchHHHHHHHHHH-----HCCCEEEEEcCCchHHHHHHHHHHHhcCCceE-EEEecCCCHHHHHH
Confidence 4445567899999999999999999999 6899999998654321 01235688 99999999998887
Q ss_pred HHHhccc---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccC
Q 028258 75 KLSLISQ---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIF 142 (211)
Q Consensus 75 ~~~~~~~---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~ 142 (211)
+++.+.. .+|++||+|+... .++...+++|+.++.++++++...+. ..+..+|+++||...+...
T Consensus 93 ~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~-~~~~g~iv~isS~~~~~~~-- 169 (269)
T 3gk3_A 93 CAEKVLADFGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMV-ERRFGRIVNIGSVNGSRGA-- 169 (269)
T ss_dssp HHHHHHHHHSCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHTCEEEEEECCHHHHHCC--
T ss_pred HHHHHHHHcCCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-hcCCCEEEEeCChhhccCC--
Confidence 7765421 2899999998642 14556789999998888887754210 0134688888875443210
Q ss_pred CccccCCCCCCCCCCcCCCCCCCCCCcchhHHHH-----Hh---h--cCCCceEEEecCCceEecCC
Q 028258 143 DPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDV-----SA---S--YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 143 ~~~~~g~~~~~~~~~~e~~~~~~~~~~~~~~e~~-----l~---~--~~~~~~~~i~Rp~~i~G~~~ 199 (211)
+....|...|. .+ . ...++.+..++|+.+..+-.
T Consensus 170 -----------------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~ 213 (269)
T 3gk3_A 170 -----------------------FGQANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMV 213 (269)
T ss_dssp -----------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTT
T ss_pred -----------------------CCcchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhh
Confidence 11122332221 11 1 34689999999999987643
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=3.4e-16 Score=125.62 Aligned_cols=121 Identities=19% Similarity=0.043 Sum_probs=90.9
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
+++|++|||||+|+||++++++|+ ++|++|++++|++.... ....++. ++.+|++|++++.++++.+
T Consensus 5 l~~k~~lVTGas~gIG~aia~~l~-----~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~-~~~~Dv~~~~~~~~~~~~~ 78 (247)
T 2jah_A 5 LQGKVALITGASSGIGEATARALA-----AEGAAVAIAARRVEKLRALGDELTAAGAKVH-VLELDVADRQGVDAAVAST 78 (247)
T ss_dssp TTTCEEEEESCSSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHHHTTCCEE-EEECCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHHHhcCCcEE-EEECCCCCHHHHHHHHHHH
Confidence 456899999999999999999999 68999999999754311 0134678 8999999999888777654
Q ss_pred cc---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 80 SQ---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 80 ~~---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
.. .+|.+||+|+... .++...+++|+.++.++++++...+... + .+|+++||..
T Consensus 79 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~-g~iv~isS~~ 144 (247)
T 2jah_A 79 VEALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRS-K-GTVVQMSSIA 144 (247)
T ss_dssp HHHHSCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-T-CEEEEECCGG
T ss_pred HHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC-C-CEEEEEccHH
Confidence 21 2899999998632 1355678999999999888876542001 2 5888888754
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=3.6e-16 Score=127.57 Aligned_cols=125 Identities=17% Similarity=0.047 Sum_probs=93.2
Q ss_pred CCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----C---CCCCceeEEEeeCCCHHHHHHHHH
Q 028258 6 QNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----F---PTALVDRYITFDALDPTDTALKLS 77 (211)
Q Consensus 6 ~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----~---~~~~~~~~i~~Dl~d~~~~~~~~~ 77 (211)
..++|++|||||+|+||++++++|+ ++|++|++++|+..... . ....+. ++.+|++|++++.++++
T Consensus 24 ~l~~k~~lVTGas~GIG~aia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~v~~~~~ 97 (277)
T 4fc7_A 24 LLRDKVAFITGGGSGIGFRIAEIFM-----RHGCHTVIASRSLPRVLTAARKLAGATGRRCL-PLSMDVRAPPAVMAAVD 97 (277)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHH-----TTTCEEEEEESCHHHHHHHHHHHHHHHSSCEE-EEECCTTCHHHHHHHHH
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEE-EEEcCCCCHHHHHHHHH
Confidence 3457899999999999999999999 68999999999864310 0 135678 99999999998887776
Q ss_pred hccc---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeee
Q 028258 78 LISQ---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 137 (211)
Q Consensus 78 ~~~~---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y 137 (211)
.+.. .+|++||+|+... .++...+++|+.++.++++++...+. ..+..+|+++||...+
T Consensus 98 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-~~~~g~iv~isS~~~~ 168 (277)
T 4fc7_A 98 QALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFF-RDHGGVIVNITATLGN 168 (277)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTH-HHHCEEEEEECCSHHH
T ss_pred HHHHHcCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-HcCCCEEEEECchhhC
Confidence 5421 3899999998532 24566789999999999988754310 0023688888876543
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.66 E-value=6.1e-16 Score=127.35 Aligned_cols=157 Identities=13% Similarity=-0.056 Sum_probs=111.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC--C-------CCCCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP--G-------WFPTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~--~-------~~~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
.+|++|||||+|+||++++++|+ ++|++|++++|+... . .....++. ++.+|++|++++.++++.
T Consensus 48 ~~k~vlVTGas~GIG~aia~~la-----~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dv~d~~~v~~~~~~ 121 (294)
T 3r3s_A 48 KDRKALVTGGDSGIGRAAAIAYA-----REGADVAINYLPAEEEDAQQVKALIEECGRKAV-LLPGDLSDESFARSLVHK 121 (294)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEE-ECCCCTTSHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEE-EEEecCCCHHHHHHHHHH
Confidence 46899999999999999999999 699999998886331 0 00135677 889999999988777765
Q ss_pred ccc---ccceEEeecccCC----------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCcc
Q 028258 79 ISQ---EITNLFWVPLQVQ----------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPS 145 (211)
Q Consensus 79 ~~~---~~~~v~~~a~~~~----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~ 145 (211)
+.. .+|++||+|+... .++...+++|+.++.++++++...+ .+-.+|+++||...|...
T Consensus 122 ~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~---~~~g~Iv~isS~~~~~~~----- 193 (294)
T 3r3s_A 122 AREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLL---PKGASIITTSSIQAYQPS----- 193 (294)
T ss_dssp HHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGC---CTTCEEEEECCGGGTSCC-----
T ss_pred HHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHh---hcCCEEEEECChhhccCC-----
Confidence 421 3899999998632 1355678999999999999998763 122478888886544210
Q ss_pred ccCCCCCCCCCCcCCCCCCCCCCcchhHHH-----HHhh-----cCCCceEEEecCCceEecC
Q 028258 146 LAGQLMPYEVPFKEDSSRLPFPNFYYELED-----VSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 146 ~~g~~~~~~~~~~e~~~~~~~~~~~~~~e~-----~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
+....|...| +.+. ...|+++..++|+.|.++-
T Consensus 194 --------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~ 236 (294)
T 3r3s_A 194 --------------------PHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTAL 236 (294)
T ss_dssp --------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHH
T ss_pred --------------------CCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCcccc
Confidence 1111232222 1111 3468999999999999864
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=99.66 E-value=1.2e-15 Score=122.76 Aligned_cols=122 Identities=8% Similarity=-0.055 Sum_probs=91.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHhcc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSLIS 80 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~ 80 (211)
.+|++|||||+|+||++++++|+ ++|++|++++|++.... ....++. ++.+|++|++++.++++.+.
T Consensus 6 ~~k~vlVTGas~GIG~aia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~v~~~~~~~~ 79 (252)
T 3h7a_A 6 RNATVAVIGAGDYIGAEIAKKFA-----AEGFTVFAGRRNGEKLAPLVAEIEAAGGRIV-ARSLDARNEDEVTAFLNAAD 79 (252)
T ss_dssp CSCEEEEECCSSHHHHHHHHHHH-----HTTCEEEEEESSGGGGHHHHHHHHHTTCEEE-EEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCeEE-EEECcCCCHHHHHHHHHHHH
Confidence 46899999999999999999999 68999999999866421 0135678 99999999998888776542
Q ss_pred --cccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCee
Q 028258 81 --QEITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKH 136 (211)
Q Consensus 81 --~~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~ 136 (211)
..+|++||+|+... .++...+++|+.++.++++++...+... +..+|+++||...
T Consensus 80 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~ 145 (252)
T 3h7a_A 80 AHAPLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAH-GQGKIFFTGATAS 145 (252)
T ss_dssp HHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEEEGGG
T ss_pred hhCCceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEECCHHH
Confidence 12899999998632 1455678999999888888765432001 2367888887543
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.66 E-value=4.2e-16 Score=127.53 Aligned_cols=163 Identities=11% Similarity=-0.078 Sum_probs=112.7
Q ss_pred cCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC-------CCCCCCceeEEEeeCCCHHHHHHHHH
Q 028258 5 DQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-------WFPTALVDRYITFDALDPTDTALKLS 77 (211)
Q Consensus 5 ~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~-------~~~~~~~~~~i~~Dl~d~~~~~~~~~ 77 (211)
....+|++|||||+|+||++++++|+ ++|++|++++|+.... ......+. ++.+|++|++++.++++
T Consensus 4 ~~l~gk~vlVTGas~GIG~aia~~la-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~v~~~~~ 77 (280)
T 3tox_A 4 SRLEGKIAIVTGASSGIGRAAALLFA-----REGAKVVVTARNGNALAELTDEIAGGGGEAA-ALAGDVGDEALHEALVE 77 (280)
T ss_dssp CTTTTCEEEESSTTSHHHHHHHHHHH-----HTTCEEEECCSCHHHHHHHHHHHTTTTCCEE-ECCCCTTCHHHHHHHHH
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHHHhcCCcEE-EEECCCCCHHHHHHHHH
Confidence 33457899999999999999999999 6899999999976431 01235678 88999999998888776
Q ss_pred hccc---ccceEEeecccCC----------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCc
Q 028258 78 LISQ---EITNLFWVPLQVQ----------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDP 144 (211)
Q Consensus 78 ~~~~---~~~~v~~~a~~~~----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~ 144 (211)
.+.. .+|++||+|+... .++...+++|+.++.++++++...+... +-.+|+++||...+..+
T Consensus 78 ~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~~~---- 152 (280)
T 3tox_A 78 LAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAAL-GGGSLTFTSSFVGHTAG---- 152 (280)
T ss_dssp HHHHHHSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEECCSBTTTBC----
T ss_pred HHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCCEEEEEcChhhCcCC----
Confidence 5421 2899999998531 1355678999999999888776542101 23588888875443100
Q ss_pred cccCCCCCCCCCCcCCCCCCCCCCcchhHHH-----HHhh-----cCCCceEEEecCCceEecC
Q 028258 145 SLAGQLMPYEVPFKEDSSRLPFPNFYYELED-----VSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 145 ~~~g~~~~~~~~~~e~~~~~~~~~~~~~~e~-----~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
. +....|...| +.+. ...++.+..++|+.+..+.
T Consensus 153 ----------------~----~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~ 196 (280)
T 3tox_A 153 ----------------F----AGVAPYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPA 196 (280)
T ss_dssp ----------------C----TTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTT
T ss_pred ----------------C----CCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCch
Confidence 0 1112232222 1111 3578999999999998874
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} | Back alignment and structure |
|---|
Probab=99.65 E-value=1.2e-15 Score=123.12 Aligned_cols=122 Identities=11% Similarity=-0.005 Sum_probs=90.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC--CC-------CCCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP--GW-------FPTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~--~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
|+|++|||||+|+||++++++|+ ++|++|++++|++.. .. ....++. ++.+|++|++++.++++.
T Consensus 1 ~~k~vlVTGas~gIG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~v~~~~~~ 74 (258)
T 3a28_C 1 MSKVAMVTGGAQGIGRGISEKLA-----ADGFDIAVADLPQQEEQAAETIKLIEAADQKAV-FVGLDVTDKANFDSAIDE 74 (258)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHH-----HHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEE-EEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEE-EEEccCCCHHHHHHHHHH
Confidence 35899999999999999999999 689999999997653 11 0134678 899999999988777764
Q ss_pred ccc---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCc-eEEEEeecCee
Q 028258 79 ISQ---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRL-RHVALLTGTKH 136 (211)
Q Consensus 79 ~~~---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~-~~~~~~s~~~~ 136 (211)
+.. .+|++||+|+... .++...+++|+.++.++++++...+... +. .+|+++||...
T Consensus 75 ~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~~g~iv~isS~~~ 144 (258)
T 3a28_C 75 AAEKLGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDEL-GVKGKIINAASIAA 144 (258)
T ss_dssp HHHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCCEEEEECCGGG
T ss_pred HHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhc-CCCcEEEEECcchh
Confidence 421 2899999998632 1455678999999988888776532101 23 68888887543
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.65 E-value=7.5e-16 Score=125.09 Aligned_cols=160 Identities=16% Similarity=0.006 Sum_probs=107.8
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
+++|++|||||+|+||++++++|+ ++|++|++++|+..... .....+. ++.+|++|++++.+.++.+
T Consensus 2 l~~k~~lVTGas~GIG~aia~~la-----~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~-~~~~Dv~d~~~v~~~~~~~ 75 (264)
T 3tfo_A 2 VMDKVILITGASGGIGEGIARELG-----VAGAKILLGARRQARIEAIATEIRDAGGTAL-AQVLDVTDRHSVAAFAQAA 75 (264)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHH-----HTTCEEEEEESSHHHHHHHHHHHHHTTCEEE-EEECCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEeCCccHHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHHHhcCCcEE-EEEcCCCCHHHHHHHHHHH
Confidence 467999999999999999999999 68999999999864311 0134677 8899999999888777654
Q ss_pred cc---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCcccc
Q 028258 80 SQ---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLA 147 (211)
Q Consensus 80 ~~---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~ 147 (211)
.. .+|++||+|+... .++...+++|+.++.++++++...+... +..+|+++||...+..
T Consensus 76 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~IV~isS~~~~~~-------- 146 (264)
T 3tfo_A 76 VDTWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQ-RSGQIINIGSIGALSV-------- 146 (264)
T ss_dssp HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTCC--------
T ss_pred HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCeEEEEEcCHHHccc--------
Confidence 21 3899999998642 1455678999999888877765432001 3468888887543321
Q ss_pred CCCCCCCCCCcCCCCCCCCCCcchhHHH-----H---HhhcCCCceEEEecCCceEecC
Q 028258 148 GQLMPYEVPFKEDSSRLPFPNFYYELED-----V---SASYSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 148 g~~~~~~~~~~e~~~~~~~~~~~~~~e~-----~---l~~~~~~~~~~i~Rp~~i~G~~ 198 (211)
. +....|...| + +..+.+++.+..++|+.+..+-
T Consensus 147 -------------~----~~~~~Y~asKaal~~l~~~la~e~~gIrvn~v~PG~v~T~~ 188 (264)
T 3tfo_A 147 -------------V----PTAAVYCATKFAVRAISDGLRQESTNIRVTCVNPGVVESEL 188 (264)
T ss_dssp -------------C----TTCHHHHHHHHHHHHHHHHHHHHCSSEEEEEEEECCC----
T ss_pred -------------C----CCChhHHHHHHHHHHHHHHHHHhCCCCEEEEEecCCCcCcc
Confidence 0 1111232222 1 1112359999999999987654
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=3.5e-16 Score=125.59 Aligned_cols=162 Identities=15% Similarity=0.022 Sum_probs=112.1
Q ss_pred cCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC----CCCCCceeEEEeeCCCHHHHHHHHHhcc
Q 028258 5 DQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW----FPTALVDRYITFDALDPTDTALKLSLIS 80 (211)
Q Consensus 5 ~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~----~~~~~~~~~i~~Dl~d~~~~~~~~~~~~ 80 (211)
..+.+|++|||||+|+||++++++|+ ++|++|++++|++.... .....+. ++.+|++|++++.++++.+.
T Consensus 2 ~~l~gk~vlVTGas~gIG~a~a~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~v~~~~~~~~ 75 (247)
T 3rwb_A 2 ERLAGKTALVTGAAQGIGKAIAARLA-----ADGATVIVSDINAEGAKAAAASIGKKAR-AIAADISDPGSVKALFAEIQ 75 (247)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEECSCHHHHHHHHHHHCTTEE-ECCCCTTCHHHHHHHHHHHH
T ss_pred CCcCCCEEEEECCCCHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHhCCceE-EEEcCCCCHHHHHHHHHHHH
Confidence 44567999999999999999999999 68999999999765311 0135678 89999999998888877542
Q ss_pred c---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccC
Q 028258 81 Q---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAG 148 (211)
Q Consensus 81 ~---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g 148 (211)
. .+|++||+|+... .++...+++|+.++.++++++...+.......+|+++||...+...
T Consensus 76 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-------- 147 (247)
T 3rwb_A 76 ALTGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGT-------- 147 (247)
T ss_dssp HHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTC--------
T ss_pred HHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCC--------
Confidence 1 3899999998632 1456678999999888888744322001124688888876544210
Q ss_pred CCCCCCCCCcCCCCCCCCCCcchhHHH-----HHhh-----cCCCceEEEecCCceEec
Q 028258 149 QLMPYEVPFKEDSSRLPFPNFYYELED-----VSAS-----YSPAITYSVHRSSVIIGA 197 (211)
Q Consensus 149 ~~~~~~~~~~e~~~~~~~~~~~~~~e~-----~l~~-----~~~~~~~~i~Rp~~i~G~ 197 (211)
+....|...| +.+. ...++.+..++|+.+..+
T Consensus 148 -----------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~ 189 (247)
T 3rwb_A 148 -----------------PNMAAYVAAKGGVIGFTRALATELGKYNITANAVTPGLIESD 189 (247)
T ss_dssp -----------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred -----------------CCchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCc
Confidence 0111232222 1111 346899999999999765
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.65 E-value=1.1e-15 Score=124.34 Aligned_cols=118 Identities=9% Similarity=-0.085 Sum_probs=90.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC-CC-------CCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP-GW-------FPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~-~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
.+|++|||||+|+||++++++|+ ++|++|++++|+... .. .....+. ++.+|++|++++.++++.+
T Consensus 30 ~gk~~lVTGas~GIG~aia~~la-----~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~Dv~d~~~v~~~~~~~ 103 (271)
T 3v2g_A 30 AGKTAFVTGGSRGIGAAIAKRLA-----LEGAAVALTYVNAAERAQAVVSEIEQAGGRAV-AIRADNRDAEAIEQAIRET 103 (271)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESSCHHHHHHHHHHHHHTTCCEE-EEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEE-EEECCCCCHHHHHHHHHHH
Confidence 46899999999999999999999 699999998776532 00 0135678 8999999999888877654
Q ss_pred cc---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 80 SQ---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 80 ~~---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
.. .+|++||+|+... .++...+++|+.++.++++++...+. +-.+|+++||.
T Consensus 104 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~---~~g~iv~isS~ 167 (271)
T 3v2g_A 104 VEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLG---DGGRIITIGSN 167 (271)
T ss_dssp HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCC---TTCEEEEECCG
T ss_pred HHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHh---cCCEEEEEeCh
Confidence 21 3899999998632 14566789999999999999887642 23577887763
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.65 E-value=1e-15 Score=124.12 Aligned_cols=122 Identities=14% Similarity=0.028 Sum_probs=91.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC---------CCCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW---------FPTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~---------~~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
.+|++|||||+|+||++++++|+ ++|++|++++|++.... .....+. .+.+|++|++.+.+.++.
T Consensus 9 ~~k~~lVTGas~gIG~aia~~l~-----~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~-~~~~D~~~~~~~~~~~~~ 82 (267)
T 3t4x_A 9 KGKTALVTGSTAGIGKAIATSLV-----AEGANVLINGRREENVNETIKEIRAQYPDAILQ-PVVADLGTEQGCQDVIEK 82 (267)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHH-----HTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEE-EEECCTTSHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEE-EEecCCCCHHHHHHHHHh
Confidence 46899999999999999999999 68999999999864310 0124567 889999999999998887
Q ss_pred cccccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeee
Q 028258 79 ISQEITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 137 (211)
Q Consensus 79 ~~~~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y 137 (211)
... +|++||+|+... .++...+++|+.++.++.+++...+. ..+..+|+++||...+
T Consensus 83 ~g~-id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~-~~~~g~iv~isS~~~~ 148 (267)
T 3t4x_A 83 YPK-VDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMI-ERKEGRVIFIASEAAI 148 (267)
T ss_dssp CCC-CSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HTTEEEEEEECCGGGT
T ss_pred cCC-CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-hCCCCEEEEEcchhhc
Confidence 754 899999998643 14556689999997777666544310 0135688888875443
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.65 E-value=4.1e-16 Score=125.69 Aligned_cols=124 Identities=14% Similarity=-0.003 Sum_probs=90.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-CCCCCceeEEEeeCCCHHHHHHHHHhcc--cccc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-FPTALVDRYITFDALDPTDTALKLSLIS--QEIT 84 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-~~~~~~~~~i~~Dl~d~~~~~~~~~~~~--~~~~ 84 (211)
.+|++|||||+|+||++++++|+ ++|++|++++|+..... .....++ ++.+|++|++++.++++.+. ..+|
T Consensus 8 ~~k~vlVTGas~gIG~aia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~D~~~~~~v~~~~~~~~~~g~id 81 (257)
T 3tl3_A 8 RDAVAVVTGGASGLGLATTKRLL-----DAGAQVVVLDIRGEDVVADLGDRAR-FAAADVTDEAAVASALDLAETMGTLR 81 (257)
T ss_dssp --CEEEEETTTSHHHHHHHHHHH-----HHTCEEEEEESSCHHHHHHTCTTEE-EEECCTTCHHHHHHHHHHHHHHSCEE
T ss_pred cCCEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEeCchHHHHHhcCCceE-EEECCCCCHHHHHHHHHHHHHhCCCC
Confidence 46899999999999999999999 68999999999654211 1235688 99999999998877776432 1389
Q ss_pred eEEeecccCC-------------chhHHHHhhcHHHHHHHHHHHHhcCCCC-------CCceEEEEeecCeee
Q 028258 85 NLFWVPLQVQ-------------ESEEVNIFKNSTMLKNVLSVLVSSNSGR-------SRLRHVALLTGTKHY 137 (211)
Q Consensus 85 ~v~~~a~~~~-------------~~~~~~~~~n~~~~~~l~~~~~~~~~~~-------~~~~~~~~~s~~~~y 137 (211)
++||+|+... .++...+++|+.++.++++++...+... .+-.+|+++||...+
T Consensus 82 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~ 154 (257)
T 3tl3_A 82 IVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAF 154 (257)
T ss_dssp EEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--
T ss_pred EEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhc
Confidence 9999998531 2456678999999999998887653110 123578888876544
|
| >4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=6.7e-16 Score=125.13 Aligned_cols=162 Identities=14% Similarity=0.066 Sum_probs=108.5
Q ss_pred CCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC-CCC-------CCCCCceeEEEeeCCCHHHHHHHHH
Q 028258 6 QNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP-PGW-------FPTALVDRYITFDALDPTDTALKLS 77 (211)
Q Consensus 6 ~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~-~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~ 77 (211)
..|+|++|||||+|+||++++++|+ ++|++|+++.++.. ... ....+++ ++.+|++|++++.++++
T Consensus 23 ~l~~k~vlVTGas~gIG~~la~~l~-----~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~-~~~~Dl~~~~~~~~~~~ 96 (267)
T 4iiu_A 23 NAMSRSVLVTGASKGIGRAIARQLA-----ADGFNIGVHYHRDAAGAQETLNAIVANGGNGR-LLSFDVANREQCREVLE 96 (267)
T ss_dssp --CCCEEEETTTTSHHHHHHHHHHH-----HTTCEEEEEESSCHHHHHHHHHHHHHTTCCEE-EEECCTTCHHHHHHHHH
T ss_pred ccCCCEEEEECCCChHHHHHHHHHH-----HCCCEEEEEeCCchHHHHHHHHHHHhcCCceE-EEEecCCCHHHHHHHHH
Confidence 3467899999999999999999999 69999987665433 110 1235788 99999999998888776
Q ss_pred hccc---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCcc
Q 028258 78 LISQ---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPS 145 (211)
Q Consensus 78 ~~~~---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~ 145 (211)
.+.. .+|.+||+|+... .++...+++|+.++.++++++...+....+..+|+++||...+...
T Consensus 97 ~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~----- 171 (267)
T 4iiu_A 97 HEIAQHGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGN----- 171 (267)
T ss_dssp HHHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHCC-----
T ss_pred HHHHHhCCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccCC-----
Confidence 5421 3899999998643 1455678999999988888764210000134688888875443210
Q ss_pred ccCCCCCCCCCCcCCCCCCCCCCcchhHHHH--------Hhh--cCCCceEEEecCCceEecC
Q 028258 146 LAGQLMPYEVPFKEDSSRLPFPNFYYELEDV--------SAS--YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 146 ~~g~~~~~~~~~~e~~~~~~~~~~~~~~e~~--------l~~--~~~~~~~~i~Rp~~i~G~~ 198 (211)
+....|...|. +.. ...++++..++|+.+..+-
T Consensus 172 --------------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 214 (267)
T 4iiu_A 172 --------------------RGQVNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGM 214 (267)
T ss_dssp --------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTT
T ss_pred --------------------CCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCc
Confidence 01112332221 111 3468999999999998764
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=3.8e-16 Score=126.25 Aligned_cols=157 Identities=10% Similarity=-0.047 Sum_probs=109.5
Q ss_pred CCCeEEEEcCC--ChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC---C-C--CCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 8 PKSVALIIGVT--GISGLSLAEALKNPTTPGSPWKVYGAARRPPPG---W-F--PTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 8 ~~~~ilVtGat--G~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~---~-~--~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
++|++|||||+ |+||++++++|+ ++|++|++++|++... . . ..+.+. ++.+|++|++++.++++.+
T Consensus 7 ~~k~vlVTGas~~~gIG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~-~~~~D~~~~~~v~~~~~~~ 80 (261)
T 2wyu_A 7 SGKKALVMGVTNQRSLGFAIAAKLK-----EAGAEVALSYQAERLRPEAEKLAEALGGAL-LFRADVTQDEELDALFAGV 80 (261)
T ss_dssp TTCEEEEESCCSSSSHHHHHHHHHH-----HHTCEEEEEESCGGGHHHHHHHHHHTTCCE-EEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHH-----HCCCEEEEEcCCHHHHHHHHHHHHhcCCcE-EEECCCCCHHHHHHHHHHH
Confidence 46899999999 999999999999 6899999999976310 0 0 013477 8999999999888877654
Q ss_pred cc---ccceEEeecccCC-------------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCC
Q 028258 80 SQ---EITNLFWVPLQVQ-------------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFD 143 (211)
Q Consensus 80 ~~---~~~~v~~~a~~~~-------------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~ 143 (211)
.. .+|++||+|+... .++...+++|+.++.++++++...+. +-.+|+++||...+..
T Consensus 81 ~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~---~~g~iv~isS~~~~~~---- 153 (261)
T 2wyu_A 81 KEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLR---EGGGIVTLTYYASEKV---- 153 (261)
T ss_dssp HHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEE---EEEEEEEEECGGGTSB----
T ss_pred HHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhc---cCCEEEEEecccccCC----
Confidence 21 2899999998632 13456789999999999999876521 1247888887543210
Q ss_pred ccccCCCCCCCCCCcCCCCCCCCCCcchhHHH-----HHhh-----cCCCceEEEecCCceEecC
Q 028258 144 PSLAGQLMPYEVPFKEDSSRLPFPNFYYELED-----VSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 144 ~~~~g~~~~~~~~~~e~~~~~~~~~~~~~~e~-----~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
. ++...|...| +.+. ...++++.++||+.++++.
T Consensus 154 -----------------~----~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 197 (261)
T 2wyu_A 154 -----------------V----PKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVA 197 (261)
T ss_dssp -----------------C----TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTG
T ss_pred -----------------C----CCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCch
Confidence 0 0111232222 2111 3458999999999999864
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.65 E-value=7.9e-16 Score=123.11 Aligned_cols=159 Identities=18% Similarity=0.071 Sum_probs=111.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHhcc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSLIS 80 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~ 80 (211)
++|++|||||+|+||++++++|+ ++|++|++++|++.... .....++ ++.+|++|++++.+.++.+.
T Consensus 4 ~~k~vlITGas~gIG~~~a~~l~-----~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~ 77 (247)
T 3lyl_A 4 NEKVALVTGASRGIGFEVAHALA-----SKGATVVGTATSQASAEKFENSMKEKGFKAR-GLVLNISDIESIQNFFAEIK 77 (247)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHH-----HTTCEEEEEESSHHHHHHHHHHHHHTTCCEE-EEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCceE-EEEecCCCHHHHHHHHHHHH
Confidence 46899999999999999999999 68999999999765311 0135678 89999999999888877652
Q ss_pred c---ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccC
Q 028258 81 Q---EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAG 148 (211)
Q Consensus 81 ~---~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g 148 (211)
. .+|++||+|+.... ++...+++|+.++.++++++...+. ..+..+|+++||...+...
T Consensus 78 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~g~iv~isS~~~~~~~-------- 148 (247)
T 3lyl_A 78 AENLAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMM-KKRWGRIISIGSVVGSAGN-------- 148 (247)
T ss_dssp HTTCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHTCEEEEEECCTHHHHCC--------
T ss_pred HHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-HcCCeEEEEEcchhhccCC--------
Confidence 1 38999999986421 3456789999999888887654310 0123588888876543210
Q ss_pred CCCCCCCCCcCCCCCCCCCCcchhHHH-----HHhh-----cCCCceEEEecCCceEecC
Q 028258 149 QLMPYEVPFKEDSSRLPFPNFYYELED-----VSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 149 ~~~~~~~~~~e~~~~~~~~~~~~~~e~-----~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
+....|...| +.+. ...++++..++|+.+..+-
T Consensus 149 -----------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 191 (247)
T 3lyl_A 149 -----------------PGQTNYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDM 191 (247)
T ss_dssp -----------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTT
T ss_pred -----------------CCcHHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEeccc
Confidence 0112233222 2111 3468999999999998764
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} | Back alignment and structure |
|---|
Probab=99.65 E-value=1.5e-15 Score=123.03 Aligned_cols=127 Identities=10% Similarity=-0.043 Sum_probs=95.3
Q ss_pred ccccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC----------CCCCCCceeEEEeeCCCHHH
Q 028258 2 EKQDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG----------WFPTALVDRYITFDALDPTD 71 (211)
Q Consensus 2 ~~~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~----------~~~~~~~~~~i~~Dl~d~~~ 71 (211)
..|....+|++|||||+|+||++++++|+ ++|++|+++.|..... .....++. ++.+|++|+++
T Consensus 4 ~~~~~l~~k~vlVTGas~GIG~aia~~la-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dv~d~~~ 77 (262)
T 3ksu_A 4 TKYHDLKNKVIVIAGGIKNLGALTAKTFA-----LESVNLVLHYHQAKDSDTANKLKDELEDQGAKVA-LYQSDLSNEEE 77 (262)
T ss_dssp CCCSCCTTCEEEEETCSSHHHHHHHHHHT-----TSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEE-EEECCCCSHHH
T ss_pred ccccCCCCCEEEEECCCchHHHHHHHHHH-----HCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEE-EEECCCCCHHH
Confidence 34445567999999999999999999999 6999999988753210 01135678 89999999998
Q ss_pred HHHHHHhccc---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeee
Q 028258 72 TALKLSLISQ---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 137 (211)
Q Consensus 72 ~~~~~~~~~~---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y 137 (211)
+.+.++.+.. .+|++||+|+... .++...+++|+.++.++++++...+ .+-.+++++||...+
T Consensus 78 v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m---~~~g~iv~isS~~~~ 152 (262)
T 3ksu_A 78 VAKLFDFAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHM---NPNGHIITIATSLLA 152 (262)
T ss_dssp HHHHHHHHHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTE---EEEEEEEEECCCHHH
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhh---cCCCEEEEEechhhc
Confidence 8888765421 3899999998632 1455678899999999999988752 123578888876554
|
| >4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.65 E-value=4.6e-16 Score=126.70 Aligned_cols=160 Identities=11% Similarity=0.002 Sum_probs=110.9
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
..+|++|||||+|+||++++++|+ ++|++|++++|++.... ....++. ++.+|++|++++.+.++.+
T Consensus 24 l~gk~~lVTGas~gIG~aia~~la-----~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~-~~~~Dv~d~~~v~~~~~~~ 97 (271)
T 4ibo_A 24 LGGRTALVTGSSRGLGRAMAEGLA-----VAGARILINGTDPSRVAQTVQEFRNVGHDAE-AVAFDVTSESEIIEAFARL 97 (271)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHH-----HTTCEEEECCSCHHHHHHHHHHHHHTTCCEE-ECCCCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCceE-EEEcCCCCHHHHHHHHHHH
Confidence 357899999999999999999999 68999999998765311 0135678 8899999999988887754
Q ss_pred cc---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCcccc
Q 028258 80 SQ---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLA 147 (211)
Q Consensus 80 ~~---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~ 147 (211)
.. .+|++||+|+... .++...+++|+.++.++++++...+... +..+|+++||...+..
T Consensus 98 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iV~isS~~~~~~-------- 168 (271)
T 4ibo_A 98 DEQGIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPR-GYGKIVNIGSLTSELA-------- 168 (271)
T ss_dssp HHHTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTSB--------
T ss_pred HHHCCCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEEccHHhCCC--------
Confidence 21 3899999998632 1456678999999988877765432000 2357888887543211
Q ss_pred CCCCCCCCCCcCCCCCCCCCCcchhHHH-----HHhh-----cCCCceEEEecCCceEecC
Q 028258 148 GQLMPYEVPFKEDSSRLPFPNFYYELED-----VSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 148 g~~~~~~~~~~e~~~~~~~~~~~~~~e~-----~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
.++...|...| +.+. ...++.+..++|+.+..+-
T Consensus 169 -----------------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~ 212 (271)
T 4ibo_A 169 -----------------RATVAPYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDM 212 (271)
T ss_dssp -----------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGG
T ss_pred -----------------CCCchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcc
Confidence 01112233222 1111 3468999999999998763
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.65 E-value=4.3e-16 Score=126.58 Aligned_cols=162 Identities=14% Similarity=0.044 Sum_probs=108.0
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEe-CCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAA-RRPPPGW-------FPTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~-R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
+++|++|||||+|+||++++++|+ +.|++|+++. |+..... ....++. ++.+|++|++++.++++.
T Consensus 24 ~~~k~vlITGas~gIG~a~a~~l~-----~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~v~~~~~~ 97 (272)
T 4e3z_A 24 SDTPVVLVTGGSRGIGAAVCRLAA-----RQGWRVGVNYAANREAADAVVAAITESGGEAV-AIPGDVGNAADIAAMFSA 97 (272)
T ss_dssp CCSCEEEETTTTSHHHHHHHHHHH-----HTTCEEEEEESSCHHHHHHHHHHHHHTTCEEE-EEECCTTCHHHHHHHHHH
T ss_pred cCCCEEEEECCCchHHHHHHHHHH-----HCCCEEEEEcCCChhHHHHHHHHHHhcCCcEE-EEEcCCCCHHHHHHHHHH
Confidence 346899999999999999999999 6999998774 4432210 0135678 899999999988888776
Q ss_pred ccc---ccceEEeecccCCc----------hhHHHHhhcHHHHHHHHHHHHhcCCC--CCCceEEEEeecCeeeecccCC
Q 028258 79 ISQ---EITNLFWVPLQVQE----------SEEVNIFKNSTMLKNVLSVLVSSNSG--RSRLRHVALLTGTKHYMGPIFD 143 (211)
Q Consensus 79 ~~~---~~~~v~~~a~~~~~----------~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~~~~~~~~s~~~~y~~~~~~ 143 (211)
+.. .+|++||+|+.... ++...+++|+.++.++++++...+.. ..+..+|+++||...+.+.
T Consensus 98 ~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--- 174 (272)
T 4e3z_A 98 VDRQFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGS--- 174 (272)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCC---
T ss_pred HHHhCCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCC---
Confidence 521 28999999986321 34567899999998888877654210 1124678888886554311
Q ss_pred ccccCCCCCCCCCCcCCCCCCCCCCcchhHHH-----HHhh-----cCCCceEEEecCCceEecC
Q 028258 144 PSLAGQLMPYEVPFKEDSSRLPFPNFYYELED-----VSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 144 ~~~~g~~~~~~~~~~e~~~~~~~~~~~~~~e~-----~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
+.....|...| +.+. ...++++..++|+.+.++.
T Consensus 175 ---------------------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 218 (272)
T 4e3z_A 175 ---------------------ATQYVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDL 218 (272)
T ss_dssp ---------------------TTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC---
T ss_pred ---------------------CCCcchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCc
Confidence 00111132222 1111 3468999999999998874
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=6.6e-16 Score=125.59 Aligned_cols=159 Identities=12% Similarity=0.006 Sum_probs=109.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC-C-------CCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-W-------FPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~-~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
++|++|||||+|+||++++++|+ ++|++|+++.|+.... . .....+. ++.+|++|++++.++++.+
T Consensus 27 ~~k~vlVTGas~gIG~aia~~la-----~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~d~~~v~~~~~~~ 100 (269)
T 4dmm_A 27 TDRIALVTGASRGIGRAIALELA-----AAGAKVAVNYASSAGAADEVVAAIAAAGGEAF-AVKADVSQESEVEALFAAV 100 (269)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHH-----HTTCEEEEEESSCHHHHHHHHHHHHHTTCCEE-EEECCTTSHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-----HCCCEEEEEeCCChHHHHHHHHHHHhcCCcEE-EEECCCCCHHHHHHHHHHH
Confidence 46899999999999999999999 6999999998854320 0 0135678 8999999999888877654
Q ss_pred cc---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCcccc
Q 028258 80 SQ---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLA 147 (211)
Q Consensus 80 ~~---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~ 147 (211)
.. .+|++||+|+... .++...+++|+.++.++++++...+. ..+..+|+++||...+...
T Consensus 101 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~-~~~~g~iv~isS~~~~~~~------- 172 (269)
T 4dmm_A 101 IERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIML-KQRSGRIINIASVVGEMGN------- 172 (269)
T ss_dssp HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHTCCEEEEECCHHHHHCC-------
T ss_pred HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-HcCCcEEEEECchhhcCCC-------
Confidence 21 2899999998742 24556789999999888887754320 0023578888875443210
Q ss_pred CCCCCCCCCCcCCCCCCCCCCcchhHHHH-----Hhh-----cCCCceEEEecCCceEecC
Q 028258 148 GQLMPYEVPFKEDSSRLPFPNFYYELEDV-----SAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 148 g~~~~~~~~~~e~~~~~~~~~~~~~~e~~-----l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
+....|...|. .+. ...++++..++|+.+..+-
T Consensus 173 ------------------~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~ 215 (269)
T 4dmm_A 173 ------------------PGQANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDM 215 (269)
T ss_dssp ------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSC
T ss_pred ------------------CCchhHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCcc
Confidence 01112332222 111 3468999999999998753
|
| >3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.64 E-value=2e-15 Score=119.20 Aligned_cols=110 Identities=15% Similarity=0.035 Sum_probs=85.7
Q ss_pred ccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhccccc
Q 028258 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEI 83 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~ 83 (211)
|+.+++|++|||||+|+||++++++|+ ++|++|++++|+.. +|++|++++.+.++.+.. +
T Consensus 1 M~~~~~k~vlVTGas~gIG~~~a~~l~-----~~G~~V~~~~r~~~--------------~D~~~~~~v~~~~~~~g~-i 60 (223)
T 3uce_A 1 MMGSDKTVYVVLGGTSGIGAELAKQLE-----SEHTIVHVASRQTG--------------LDISDEKSVYHYFETIGA-F 60 (223)
T ss_dssp ----CCEEEEEETTTSHHHHHHHHHHC-----STTEEEEEESGGGT--------------CCTTCHHHHHHHHHHHCS-E
T ss_pred CCCCCCCEEEEECCCCHHHHHHHHHHH-----HCCCEEEEecCCcc--------------cCCCCHHHHHHHHHHhCC-C
Confidence 334457899999999999999999999 68999999988643 799999999999887754 8
Q ss_pred ceEEeecccCC----------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCee
Q 028258 84 TNLFWVPLQVQ----------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKH 136 (211)
Q Consensus 84 ~~v~~~a~~~~----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~ 136 (211)
|++||+|+... .++...+++|+.++.++++++...+ .+-.+|+++||...
T Consensus 61 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~---~~~g~iv~~sS~~~ 120 (223)
T 3uce_A 61 DHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYL---KQGGSITLTSGMLS 120 (223)
T ss_dssp EEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGE---EEEEEEEEECCGGG
T ss_pred CEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhc---cCCeEEEEecchhh
Confidence 99999998641 1355678999999999999987752 11247888877543
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.64 E-value=9.7e-16 Score=123.90 Aligned_cols=124 Identities=13% Similarity=-0.033 Sum_probs=91.6
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
+++|++|||||+|+||++++++|+ ++|++|++++|++.... ....++. ++.+|++|++++.+.++.+
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~ 78 (262)
T 1zem_A 5 FNGKVCLVTGAGGNIGLATALRLA-----EEGTAIALLDMNREALEKAEASVREKGVEAR-SYVCDVTSEEAVIGTVDSV 78 (262)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHHTTTSCEE-EEECCTTCHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEE-EEEecCCCHHHHHHHHHHH
Confidence 346899999999999999999999 68999999999754310 0134678 8999999999887777654
Q ss_pred cc---ccceEEeecccC-C---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeee
Q 028258 80 SQ---EITNLFWVPLQV-Q---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 137 (211)
Q Consensus 80 ~~---~~~~v~~~a~~~-~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y 137 (211)
.. .+|++||+|+.. . .++...+++|+.++.++++++...+... +..+|+++||...+
T Consensus 79 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~ 148 (262)
T 1zem_A 79 VRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQ-NYGRIVNTASMAGV 148 (262)
T ss_dssp HHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCHHHH
T ss_pred HHHhCCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEEcchhhc
Confidence 21 289999999854 1 1355678999999988888776532000 24688888875443
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A | Back alignment and structure |
|---|
Probab=99.64 E-value=1.1e-15 Score=124.12 Aligned_cols=118 Identities=14% Similarity=-0.081 Sum_probs=91.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC-C-------CCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-W-------FPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~-~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
.+|++|||||+|+||++++++|+ ++|++|+++.|+.... . ....++. ++.+|++|++++.+.++.+
T Consensus 17 ~~k~~lVTGas~gIG~aia~~l~-----~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~v~~~~~~~ 90 (270)
T 3is3_A 17 DGKVALVTGSGRGIGAAVAVHLG-----RLGAKVVVNYANSTKDAEKVVSEIKALGSDAI-AIKADIRQVPEIVKLFDQA 90 (270)
T ss_dssp TTCEEEESCTTSHHHHHHHHHHH-----HTTCEEEEEESSCHHHHHHHHHHHHHTTCCEE-EEECCTTSHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHH-----HCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEE-EEEcCCCCHHHHHHHHHHH
Confidence 46899999999999999999999 6999999988764321 0 0135678 9999999999888887654
Q ss_pred cc---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 80 SQ---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 80 ~~---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
.. .+|++||+|+... .++...+++|+.++.++++++...+. +-.+|+++||.
T Consensus 91 ~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~---~~g~iv~isS~ 154 (270)
T 3is3_A 91 VAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLT---EGGRIVLTSSN 154 (270)
T ss_dssp HHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCC---TTCEEEEECCT
T ss_pred HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHh---cCCeEEEEeCc
Confidence 21 2899999998642 14566789999999999999887631 23478888774
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=1.1e-15 Score=124.90 Aligned_cols=164 Identities=10% Similarity=-0.067 Sum_probs=112.1
Q ss_pred cccCCCCCeEEEEcCCCh--HHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC-----CCCCCCceeEEEeeCCCHHHHHHH
Q 028258 3 KQDQNPKSVALIIGVTGI--SGLSLAEALKNPTTPGSPWKVYGAARRPPPG-----WFPTALVDRYITFDALDPTDTALK 75 (211)
Q Consensus 3 ~~~~~~~~~ilVtGatG~--iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~-----~~~~~~~~~~i~~Dl~d~~~~~~~ 75 (211)
.|..+.+|++|||||+|+ ||++++++|+ ++|++|++++|+.... ......+. ++.+|++|++++.++
T Consensus 20 ~M~~l~~k~vlVTGasg~~GIG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~l~~~~~~~~-~~~~Dl~~~~~v~~~ 93 (280)
T 3nrc_A 20 HMGFLAGKKILITGLLSNKSIAYGIAKAMH-----REGAELAFTYVGQFKDRVEKLCAEFNPAA-VLPCDVISDQEIKDL 93 (280)
T ss_dssp --CTTTTCEEEECCCCSTTCHHHHHHHHHH-----HTTCEEEEEECTTCHHHHHHHHGGGCCSE-EEECCTTCHHHHHHH
T ss_pred cccccCCCEEEEECCCCCCCHHHHHHHHHH-----HcCCEEEEeeCchHHHHHHHHHHhcCCce-EEEeecCCHHHHHHH
Confidence 355556799999999966 9999999999 6899999999987210 01124578 999999999998888
Q ss_pred HHhccc---ccceEEeecccCC--------------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeee
Q 028258 76 LSLISQ---EITNLFWVPLQVQ--------------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYM 138 (211)
Q Consensus 76 ~~~~~~---~~~~v~~~a~~~~--------------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~ 138 (211)
++.+.. .+|++||+|+... ..+...+++|+.++.++++++...+. .+-.+|+++||...+.
T Consensus 94 ~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~--~~~g~iv~isS~~~~~ 171 (280)
T 3nrc_A 94 FVELGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMK--NRNASMVALTYIGAEK 171 (280)
T ss_dssp HHHHHHHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHT--TTTCEEEEEECGGGTS
T ss_pred HHHHHHHcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhh--cCCCeEEEEecccccc
Confidence 776521 3899999998642 13445679999999999998876531 1235788888754331
Q ss_pred cccCCccccCCCCCCCCCCcCCCCCCCCCCcchhH----HHHHh---h--cCCCceEEEecCCceEecC
Q 028258 139 GPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYEL----EDVSA---S--YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 139 ~~~~~~~~~g~~~~~~~~~~e~~~~~~~~~~~~~~----e~~l~---~--~~~~~~~~i~Rp~~i~G~~ 198 (211)
. . +....|... +.+.+ . ...++.+..++|+.+..+-
T Consensus 172 ~---------------------~---~~~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~ 216 (280)
T 3nrc_A 172 A---------------------M---PSYNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLA 216 (280)
T ss_dssp C---------------------C---TTTHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSG
T ss_pred C---------------------C---CCchhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchh
Confidence 1 0 111122221 11111 1 3468999999999998754
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=6.8e-16 Score=124.01 Aligned_cols=115 Identities=10% Similarity=0.012 Sum_probs=91.3
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhc-ccccceEEe
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLI-SQEITNLFW 88 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~-~~~~~~v~~ 88 (211)
|++|||||||+||++++++|+ ++|++|++++|++.+.. . .+.+|++|++++.++++.+ .. +|++||
T Consensus 2 k~vlVTGas~gIG~~~a~~l~-----~~G~~V~~~~r~~~~~~------~-~~~~Dl~~~~~v~~~~~~~~~~-id~lv~ 68 (257)
T 1fjh_A 2 SIIVISGCATGIGAATRKVLE-----AAGHQIVGIDIRDAEVI------A-DLSTAEGRKQAIADVLAKCSKG-MDGLVL 68 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESSSSSEE------C-CTTSHHHHHHHHHHHHTTCTTC-CSEEEE
T ss_pred CEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEeCCchhhc------c-ccccCCCCHHHHHHHHHHhCCC-CCEEEE
Confidence 789999999999999999999 68999999999865421 1 1458999999999998876 33 899999
Q ss_pred ecccCC--chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeee
Q 028258 89 VPLQVQ--ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYM 138 (211)
Q Consensus 89 ~a~~~~--~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~ 138 (211)
+|+... ..+...+++|+.++.++++++...+... +..+|+++||...|.
T Consensus 69 ~Ag~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~ 119 (257)
T 1fjh_A 69 CAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKG-HQPAAVVISSVASAH 119 (257)
T ss_dssp CCCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTS-SSCEEEEECCGGGGS
T ss_pred CCCCCCCcccHHHHHHHhhHHHHHHHHHHHHHHhhc-CCcEEEEECChhhhc
Confidence 998754 3577889999999999988886432111 347889999877663
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* | Back alignment and structure |
|---|
Probab=99.63 E-value=9.3e-16 Score=123.24 Aligned_cols=119 Identities=17% Similarity=0.073 Sum_probs=89.6
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC----CCCCCceeEEEeeCCCHHHHHHHHHhccc---c
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW----FPTALVDRYITFDALDPTDTALKLSLISQ---E 82 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~----~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~---~ 82 (211)
|++|||||+|+||++++++|+ ++|++|++++|++.... ....++. ++.+|++|++++.+.++.+.. .
T Consensus 1 k~vlVTGas~gIG~aia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~v~~~~~~~~~~~g~ 74 (248)
T 3asu_A 1 MIVLVTGATAGFGECITRRFI-----QQGHKVIATGRRQERLQELKDELGDNLY-IAQLDVRNRAAIEEMLASLPAEWCN 74 (248)
T ss_dssp CEEEETTTTSTTHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHCTTEE-EEECCTTCHHHHHHHHHTSCTTTCC
T ss_pred CEEEEECCCChHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHhcCceE-EEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 579999999999999999999 68999999999764311 0024678 899999999999999886532 3
Q ss_pred cceEEeecccCC----------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 83 ITNLFWVPLQVQ----------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 83 ~~~v~~~a~~~~----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
+|++||+|+... .++...+++|+.++.++++++...+... +..+|+++||..
T Consensus 75 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-~~g~iv~isS~~ 136 (248)
T 3asu_A 75 IDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVER-NHGHIINIGSTA 136 (248)
T ss_dssp CCEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEECCGG
T ss_pred CCEEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCceEEEEccch
Confidence 899999998631 1355678999999888888776421001 246888888754
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* | Back alignment and structure |
|---|
Probab=99.63 E-value=5e-15 Score=119.73 Aligned_cols=121 Identities=10% Similarity=-0.023 Sum_probs=92.0
Q ss_pred CCCCeEEEEcCCCh--HHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC--------CCCCCCceeEEEeeCCCHHHHHHHH
Q 028258 7 NPKSVALIIGVTGI--SGLSLAEALKNPTTPGSPWKVYGAARRPPPG--------WFPTALVDRYITFDALDPTDTALKL 76 (211)
Q Consensus 7 ~~~~~ilVtGatG~--iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~--------~~~~~~~~~~i~~Dl~d~~~~~~~~ 76 (211)
+.+|++|||||+|+ ||++++++|+ ++|++|++++|+.... .....++. ++.+|++|++++.+.+
T Consensus 5 l~~k~vlVTGasg~~GIG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~v~~~~ 78 (266)
T 3oig_A 5 LEGRNIVVMGVANKRSIAWGIARSLH-----EAGARLIFTYAGERLEKSVHELAGTLDRNDSI-ILPCDVTNDAEIETCF 78 (266)
T ss_dssp CTTCEEEEECCCSTTSHHHHHHHHHH-----HTTCEEEEEESSGGGHHHHHHHHHTSSSCCCE-EEECCCSSSHHHHHHH
T ss_pred cCCCEEEEEcCCCCCcHHHHHHHHHH-----HCCCEEEEecCchHHHHHHHHHHHhcCCCCce-EEeCCCCCHHHHHHHH
Confidence 34689999999988 9999999999 6899999999875321 01123688 9999999999888887
Q ss_pred Hhccc---ccceEEeecccCC-------------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCee
Q 028258 77 SLISQ---EITNLFWVPLQVQ-------------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKH 136 (211)
Q Consensus 77 ~~~~~---~~~~v~~~a~~~~-------------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~ 136 (211)
+.+.. .+|.+||+|+... ..+...+++|+.++.++++++...+ .+-.+|+++||...
T Consensus 79 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~g~iv~isS~~~ 151 (266)
T 3oig_A 79 ASIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMM---TEGGSIVTLTYLGG 151 (266)
T ss_dssp HHHHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGC---TTCEEEEEEECGGG
T ss_pred HHHHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhc---CCCceEEEEecccc
Confidence 76521 3899999998642 1344567899999999999988763 12357888887543
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=99.63 E-value=6.4e-16 Score=124.61 Aligned_cols=161 Identities=13% Similarity=-0.046 Sum_probs=104.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC----CCCCCceeEEEeeCCCHHHHHHHHHhccc--
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW----FPTALVDRYITFDALDPTDTALKLSLISQ-- 81 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~----~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~-- 81 (211)
.+|++|||||+|+||++++++|+ ++|++|++++|++.... .....+. ++.+|++|.+++.++++.+..
T Consensus 8 ~~k~vlITGas~gIG~~~a~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~ 81 (261)
T 3n74_A 8 EGKVALITGAGSGFGEGMAKRFA-----KGGAKVVIVDRDKAGAERVAGEIGDAAL-AVAADISKEADVDAAVEAALSKF 81 (261)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHCTTEE-EEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHH-----HCCCEEEEEcCCHHHHHHHHHHhCCceE-EEEecCCCHHHHHHHHHHHHHhc
Confidence 46899999999999999999999 68999999999865311 0135678 999999999988887765421
Q ss_pred -ccceEEeecccCC----------chhHHHHhhcHHHHHHHHHHHHhcCCC---CCCceEEEEeecCeeeecccCCcccc
Q 028258 82 -EITNLFWVPLQVQ----------ESEEVNIFKNSTMLKNVLSVLVSSNSG---RSRLRHVALLTGTKHYMGPIFDPSLA 147 (211)
Q Consensus 82 -~~~~v~~~a~~~~----------~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~~~~~~~~s~~~~y~~~~~~~~~~ 147 (211)
.+|++||+|+... .++...+++|+.++.++++++...+.. .....+|+++||...+..
T Consensus 82 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~-------- 153 (261)
T 3n74_A 82 GKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRP-------- 153 (261)
T ss_dssp SCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSC--------
T ss_pred CCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCC--------
Confidence 2899999998642 134557789999988888877654200 001346788877533210
Q ss_pred CCCCCCCCCCcCCCCCCCCCCcchhHHH-----HHhh-----cCCCceEEEecCCceEecCC
Q 028258 148 GQLMPYEVPFKEDSSRLPFPNFYYELED-----VSAS-----YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 148 g~~~~~~~~~~e~~~~~~~~~~~~~~e~-----~l~~-----~~~~~~~~i~Rp~~i~G~~~ 199 (211)
. +....|...| +.+. ...++.+..++|+.+..+-.
T Consensus 154 -------------~----~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~ 198 (261)
T 3n74_A 154 -------------R----PNLAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLL 198 (261)
T ss_dssp -------------C----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------
T ss_pred -------------C----CCccHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhh
Confidence 0 1111232222 1111 34689999999999987653
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.63 E-value=2.5e-15 Score=123.54 Aligned_cols=127 Identities=15% Similarity=0.084 Sum_probs=90.5
Q ss_pred ccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC--------CCCCCCceeEEEeeCCCH-HHHHH
Q 028258 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG--------WFPTALVDRYITFDALDP-TDTAL 74 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~--------~~~~~~~~~~i~~Dl~d~-~~~~~ 74 (211)
|.+..+|++|||||+|+||++++++|+ ++|++|++++|+..+. .....+++ ++.+|++|+ +.+..
T Consensus 7 ~~~~~~k~vlITGas~GIG~~~a~~L~-----~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~-~~~~Dl~~~~~~v~~ 80 (311)
T 3o26_A 7 NTVTKRRCAVVTGGNKGIGFEICKQLS-----SNGIMVVLTCRDVTKGHEAVEKLKNSNHENVV-FHQLDVTDPIATMSS 80 (311)
T ss_dssp -----CCEEEESSCSSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHHTTTCCSEE-EEECCTTSCHHHHHH
T ss_pred CccCCCcEEEEecCCchHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCCceE-EEEccCCCcHHHHHH
Confidence 344457899999999999999999999 6899999999986431 01124688 999999998 77766
Q ss_pred HHHhccc---ccceEEeecccCCc---------------------------------------hhHHHHhhcHHHHHHHH
Q 028258 75 KLSLISQ---EITNLFWVPLQVQE---------------------------------------SEEVNIFKNSTMLKNVL 112 (211)
Q Consensus 75 ~~~~~~~---~~~~v~~~a~~~~~---------------------------------------~~~~~~~~n~~~~~~l~ 112 (211)
+++.+.. .+|++||+|+.... .+...+++|+.++.+++
T Consensus 81 ~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~ 160 (311)
T 3o26_A 81 LADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVT 160 (311)
T ss_dssp HHHHHHHHHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHH
T ss_pred HHHHHHHhCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHH
Confidence 6654321 38999999986421 23445799999988888
Q ss_pred HHHHhcCCCCCCceEEEEeecCeee
Q 028258 113 SVLVSSNSGRSRLRHVALLTGTKHY 137 (211)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~s~~~~y 137 (211)
+++...+... +..+|+++||...+
T Consensus 161 ~~~~~~l~~~-~~~~IV~isS~~~~ 184 (311)
T 3o26_A 161 EVLIPLLQLS-DSPRIVNVSSSTGS 184 (311)
T ss_dssp HHHHHHHTTS-SSCEEEEECCGGGS
T ss_pred HHhhHhhccC-CCCeEEEEecCCcc
Confidence 8876542111 34688888886554
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.63 E-value=2e-15 Score=121.39 Aligned_cols=123 Identities=15% Similarity=0.053 Sum_probs=89.7
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC---------C-CCCCceeEEEeeCCCHHHHHHHH
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW---------F-PTALVDRYITFDALDPTDTALKL 76 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~---------~-~~~~~~~~i~~Dl~d~~~~~~~~ 76 (211)
.++|++|||||+|+||++++++|+ ++|++|++++|+..... . ....+. ++.+|++|++++.+.+
T Consensus 5 ~~~k~~lVTGas~GIG~aia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~v~~~~ 78 (250)
T 3nyw_A 5 KQKGLAIITGASQGIGAVIAAGLA-----TDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPI-VLPLDITDCTKADTEI 78 (250)
T ss_dssp CCCCEEEEESTTSHHHHHHHHHHH-----HHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCE-EEECCTTCHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHHHHhccccCcce-EEeccCCCHHHHHHHH
Confidence 346899999999999999999999 68999999999865311 0 115678 8999999999888777
Q ss_pred Hhccc---ccceEEeecccCC--------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCee
Q 028258 77 SLISQ---EITNLFWVPLQVQ--------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKH 136 (211)
Q Consensus 77 ~~~~~---~~~~v~~~a~~~~--------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~ 136 (211)
+.+.. .+|++||+|+... .++...+++|+.++.++++++...+... +..+|+++||...
T Consensus 79 ~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv~isS~~~ 148 (250)
T 3nyw_A 79 KDIHQKYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQ-KNGYIFNVASRAA 148 (250)
T ss_dssp HHHHHHHCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECC---
T ss_pred HHHHHhcCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEEccHHh
Confidence 65421 3899999998632 1355678999999888888775431001 3467888877543
|
| >2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... | Back alignment and structure |
|---|
Probab=99.63 E-value=3.4e-15 Score=121.11 Aligned_cols=120 Identities=7% Similarity=-0.054 Sum_probs=90.3
Q ss_pred CCCCCeEEEEcC--CChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC-----CCCCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 6 QNPKSVALIIGV--TGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-----WFPTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 6 ~~~~~~ilVtGa--tG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~-----~~~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
.+++|++||||| +|+||++++++|+ ++|++|++++|++.+. .....++. ++.+|++|++++.+.++.
T Consensus 4 ~l~~k~vlVTGa~~s~gIG~aia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~v~~~~~~ 77 (269)
T 2h7i_A 4 LLDGKRILVSGIITDSSIAFHIARVAQ-----EQGAQLVLTGFDRLRLIQRITDRLPAKAP-LLELDVQNEEHLASLAGR 77 (269)
T ss_dssp TTTTCEEEECCCSSTTSHHHHHHHHHH-----HTTCEEEEEECSCHHHHHHHHTTSSSCCC-EEECCTTCHHHHHHHHHH
T ss_pred ccCCCEEEEECCCCCCchHHHHHHHHH-----HCCCEEEEEecChHHHHHHHHHhcCCCce-EEEccCCCHHHHHHHHHH
Confidence 345689999999 9999999999999 6899999999976421 11134678 899999999988887765
Q ss_pred ccc------ccceEEeecccCC--------------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 79 ISQ------EITNLFWVPLQVQ--------------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 79 ~~~------~~~~v~~~a~~~~--------------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
+.. .+|++||+|+... .++...+++|+.++.++++++...+. .-.+|+++||.
T Consensus 78 ~~~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~---~~g~iv~iss~ 150 (269)
T 2h7i_A 78 VTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMN---PGGSIVGMDFD 150 (269)
T ss_dssp HHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEE---EEEEEEEEECC
T ss_pred HHHHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhc---cCCeEEEEcCc
Confidence 411 2899999998543 13455678999999999998876521 12477777764
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.63 E-value=2.5e-15 Score=120.76 Aligned_cols=159 Identities=16% Similarity=0.088 Sum_probs=107.3
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC-C-------CCCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-W-------FPTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~-~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
..+|++|||||+|+||++++++|+ ++|++|++++|+.... . .....+. ++.+|++|.+++.++++.
T Consensus 11 ~~~k~vlITGas~giG~~ia~~l~-----~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~v~~~~~~ 84 (256)
T 3ezl_A 11 MSQRIAYVTGGMGGIGTSICQRLH-----KDGFRVVAGCGPNSPRRVKWLEDQKALGFDFY-ASEGNVGDWDSTKQAFDK 84 (256)
T ss_dssp --CEEEEETTTTSHHHHHHHHHHH-----HTTEEEEEEECTTCSSHHHHHHHHHHTTCCCE-EEECCTTCHHHHHHHHHH
T ss_pred CCCCEEEEECCCChHHHHHHHHHH-----HCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeE-EEecCCCCHHHHHHHHHH
Confidence 356899999999999999999999 6899999888543321 0 0135678 899999999988887765
Q ss_pred ccc---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccc
Q 028258 79 ISQ---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSL 146 (211)
Q Consensus 79 ~~~---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~ 146 (211)
+.. .+|++||+|+... .++...+++|+.++.++++++...+. ..+..+|+++||...+...
T Consensus 85 ~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~-~~~~g~iv~isS~~~~~~~------ 157 (256)
T 3ezl_A 85 VKAEVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMV-ERGWGRIINISSVNGQKGQ------ 157 (256)
T ss_dssp HHHHTCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHTCEEEEEECCCCGGGSC------
T ss_pred HHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-hcCCCEEEEEcchhhccCC------
Confidence 521 2899999998643 24556789999997777766643210 0034688888885443210
Q ss_pred cCCCCCCCCCCcCCCCCCCCCCcchhHHHH-----Hhh-----cCCCceEEEecCCceEec
Q 028258 147 AGQLMPYEVPFKEDSSRLPFPNFYYELEDV-----SAS-----YSPAITYSVHRSSVIIGA 197 (211)
Q Consensus 147 ~g~~~~~~~~~~e~~~~~~~~~~~~~~e~~-----l~~-----~~~~~~~~i~Rp~~i~G~ 197 (211)
++...|...|. .+. ...++.+..++|+.+..+
T Consensus 158 -------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~ 199 (256)
T 3ezl_A 158 -------------------FGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTD 199 (256)
T ss_dssp -------------------SCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred -------------------CCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCc
Confidence 11122332222 111 346899999999998765
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.63 E-value=1.5e-15 Score=122.00 Aligned_cols=155 Identities=10% Similarity=-0.038 Sum_probs=101.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccceEE
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITNLF 87 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~ 87 (211)
.+|++|||||||+||++++++|+ ++|++|++++|++.... ....+. ++ +|+ .+++...++.+.. +|++|
T Consensus 18 ~~k~vlVTGas~gIG~~~a~~l~-----~~G~~V~~~~r~~~~~~-~~~~~~-~~-~D~--~~~~~~~~~~~~~-iD~lv 86 (249)
T 1o5i_A 18 RDKGVLVLAASRGIGRAVADVLS-----QEGAEVTICARNEELLK-RSGHRY-VV-CDL--RKDLDLLFEKVKE-VDILV 86 (249)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHH-----HTTCEEEEEESCHHHHH-HTCSEE-EE-CCT--TTCHHHHHHHSCC-CSEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-----HCCCEEEEEcCCHHHHH-hhCCeE-EE-eeH--HHHHHHHHHHhcC-CCEEE
Confidence 47899999999999999999999 68999999999763211 013456 67 999 4456666666543 89999
Q ss_pred eecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCc
Q 028258 88 WVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFK 158 (211)
Q Consensus 88 ~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~ 158 (211)
|+|+.... ++...+++|+.++.++.+++...+. ..+..+|+++||...|...
T Consensus 87 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~-~~~~g~iv~isS~~~~~~~------------------ 147 (249)
T 1o5i_A 87 LNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMK-EKGWGRIVAITSFSVISPI------------------ 147 (249)
T ss_dssp ECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHTCEEEEEECCGGGTSCC------------------
T ss_pred ECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-HcCCcEEEEEcchHhcCCC------------------
Confidence 99986321 3456678898886665554432210 0035789999886544210
Q ss_pred CCCCCCCCCCcchh----HHHHHhh-----cCCCceEEEecCCceEecC
Q 028258 159 EDSSRLPFPNFYYE----LEDVSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 159 e~~~~~~~~~~~~~----~e~~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
+....|.. .+.+.+. ...++++.++||+.+.++.
T Consensus 148 ------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 190 (249)
T 1o5i_A 148 ------ENLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETER 190 (249)
T ss_dssp ------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTT
T ss_pred ------CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCc
Confidence 01112222 1111111 3468999999999998874
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A* | Back alignment and structure |
|---|
Probab=99.63 E-value=6.4e-15 Score=120.49 Aligned_cols=160 Identities=11% Similarity=-0.078 Sum_probs=109.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----------------------CCCCCceeEEEe
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----------------------FPTALVDRYITF 64 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----------------------~~~~~~~~~i~~ 64 (211)
.+|++|||||+|+||++++++|+ ++|++|++++|++.... .....+. ++.+
T Consensus 10 ~~k~~lVTGas~gIG~aia~~la-----~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 83 (286)
T 3uve_A 10 EGKVAFVTGAARGQGRSHAVRLA-----QEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIV-TAEV 83 (286)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHH-----HTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEE-EEEC
T ss_pred CCCEEEEeCCCchHHHHHHHHHH-----HCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceE-EEEc
Confidence 46899999999999999999999 69999999998732100 0134678 8999
Q ss_pred eCCCHHHHHHHHHhccc---ccceEEeecccCC----------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEe
Q 028258 65 DALDPTDTALKLSLISQ---EITNLFWVPLQVQ----------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALL 131 (211)
Q Consensus 65 Dl~d~~~~~~~~~~~~~---~~~~v~~~a~~~~----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~ 131 (211)
|++|++++.++++.+.. .+|++||+|+... .++...+++|+.++.++++++...+.....-.+|+++
T Consensus 84 Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~i 163 (286)
T 3uve_A 84 DVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILT 163 (286)
T ss_dssp CTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEE
T ss_pred CCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEE
Confidence 99999988887765421 3899999998632 1355678999999999888876542101113578888
Q ss_pred ecCeeeecccCCccccCCCCCCCCCCcCCCCCCCCCCcchhHHH-----HHh---h--cCCCceEEEecCCceEecC
Q 028258 132 TGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELED-----VSA---S--YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 132 s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~~~~~~~~~~~~~e~-----~l~---~--~~~~~~~~i~Rp~~i~G~~ 198 (211)
||...+.. . +....|...| +.+ . ...++.+..++|+.+..+-
T Consensus 164 sS~~~~~~---------------------~----~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~ 215 (286)
T 3uve_A 164 SSVGGLKA---------------------Y----PHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPM 215 (286)
T ss_dssp CCGGGTSC---------------------C----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTT
T ss_pred CchhhccC---------------------C----CCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCc
Confidence 87543321 0 1111232222 111 1 3468999999999998764
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... | Back alignment and structure |
|---|
Probab=99.62 E-value=2.6e-15 Score=122.98 Aligned_cols=161 Identities=11% Similarity=-0.013 Sum_probs=108.9
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCC-CCCC--------CCCCCceeEEEeeCCC----HHHHH
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP-PPGW--------FPTALVDRYITFDALD----PTDTA 73 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~-~~~~--------~~~~~~~~~i~~Dl~d----~~~~~ 73 (211)
+.+|++|||||+|+||++++++|+ ++|++|++++|++ .... .....+. ++.+|++| ++++.
T Consensus 21 l~~k~~lVTGas~gIG~aia~~L~-----~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~-~~~~Dv~~~~~~~~~v~ 94 (288)
T 2x9g_A 21 MEAPAAVVTGAAKRIGRAIAVKLH-----QTGYRVVIHYHNSAEAAVSLADELNKERSNTAV-VCQADLTNSNVLPASCE 94 (288)
T ss_dssp -CCCEEEETTCSSHHHHHHHHHHH-----HHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEE-EEECCCSCSTTHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHH-----HCCCeEEEEeCCchHHHHHHHHHHHhhcCCceE-EEEeecCCccCCHHHHH
Confidence 456899999999999999999999 6899999999987 3210 0134678 89999999 88887
Q ss_pred HHHHhccc---ccceEEeecccCC----------------c---hhHHHHhhcHHHHHHHHHHHHhcCCCCCC-----ce
Q 028258 74 LKLSLISQ---EITNLFWVPLQVQ----------------E---SEEVNIFKNSTMLKNVLSVLVSSNSGRSR-----LR 126 (211)
Q Consensus 74 ~~~~~~~~---~~~~v~~~a~~~~----------------~---~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-----~~ 126 (211)
++++.+.. .+|++||+|+... . .+...+++|+.++.++++++...+..... ..
T Consensus 95 ~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g 174 (288)
T 2x9g_A 95 EIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNL 174 (288)
T ss_dssp HHHHHHHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCE
T ss_pred HHHHHHHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCe
Confidence 77764421 2899999998532 1 23346789999999998888765311110 35
Q ss_pred EEEEeecCeeeecccCCccccCCCCCCCCCCcCCCCCCCCCCcchhHHH-----HHhh-----cCCCceEEEecCCceEe
Q 028258 127 HVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELED-----VSAS-----YSPAITYSVHRSSVIIG 196 (211)
Q Consensus 127 ~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~~~~~~~~~~~~~e~-----~l~~-----~~~~~~~~i~Rp~~i~G 196 (211)
+|+++||...+.. .+....|...| +.+. ...++.+..++|+.+.+
T Consensus 175 ~iv~isS~~~~~~-------------------------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t 229 (288)
T 2x9g_A 175 SIVNLCDAMVDQP-------------------------CMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLL 229 (288)
T ss_dssp EEEEECCTTTTSC-------------------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSC
T ss_pred EEEEEecccccCC-------------------------CCCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccC
Confidence 7888877543210 01122233222 1111 34689999999999988
Q ss_pred cC
Q 028258 197 AS 198 (211)
Q Consensus 197 ~~ 198 (211)
+-
T Consensus 230 ~~ 231 (288)
T 2x9g_A 230 PV 231 (288)
T ss_dssp CT
T ss_pred cc
Confidence 74
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.62 E-value=9.5e-16 Score=125.05 Aligned_cols=126 Identities=13% Similarity=0.012 Sum_probs=91.5
Q ss_pred CCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC----CCCCCceeEEEeeCCCHHHHHHHHHhccc
Q 028258 6 QNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW----FPTALVDRYITFDALDPTDTALKLSLISQ 81 (211)
Q Consensus 6 ~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~----~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~ 81 (211)
...+|++|||||+|+||++++++|+ ++|++|++++|+..... .....+. ++.+|++|.+++.++++.++.
T Consensus 27 ~l~~k~vlVTGas~GIG~aia~~l~-----~~G~~Vi~~~r~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~v~~~~~~~~~ 100 (281)
T 3ppi_A 27 QFEGASAIVSGGAGGLGEATVRRLH-----ADGLGVVIADLAAEKGKALADELGNRAE-FVSTNVTSEDSVLAAIEAANQ 100 (281)
T ss_dssp GGTTEEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHCTTEE-EEECCTTCHHHHHHHHHHHTT
T ss_pred ccCCCEEEEECCCChHHHHHHHHHH-----HCCCEEEEEeCChHHHHHHHHHhCCceE-EEEcCCCCHHHHHHHHHHHHH
Confidence 3347899999999999999999999 68999999999765311 0135688 999999999998888776521
Q ss_pred --ccceEEee-cccCC--------------chhHHHHhhcHHHHHHHHHHHHhcCCC-----CCCceEEEEeecCeee
Q 028258 82 --EITNLFWV-PLQVQ--------------ESEEVNIFKNSTMLKNVLSVLVSSNSG-----RSRLRHVALLTGTKHY 137 (211)
Q Consensus 82 --~~~~v~~~-a~~~~--------------~~~~~~~~~n~~~~~~l~~~~~~~~~~-----~~~~~~~~~~s~~~~y 137 (211)
.+|++||+ ++... ..+...+++|+.++.++++++...+.. ..+-.+|+++||...+
T Consensus 101 ~~~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~ 178 (281)
T 3ppi_A 101 LGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGY 178 (281)
T ss_dssp SSEEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGT
T ss_pred hCCCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEeccccc
Confidence 38899999 43311 125667899999999988887644210 0123578888875443
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.62 E-value=1.3e-14 Score=118.02 Aligned_cols=124 Identities=11% Similarity=-0.055 Sum_probs=93.6
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCC--------------CCCCceeEEEeeCCCHHHH
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF--------------PTALVDRYITFDALDPTDT 72 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~--------------~~~~~~~~i~~Dl~d~~~~ 72 (211)
+++|++|||||+|+||++++++|+ ++|++|++++|+..+... ...++. ++.+|++|++++
T Consensus 4 l~~k~~lVTGas~GIG~aia~~la-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~v 77 (274)
T 3e03_A 4 LSGKTLFITGASRGIGLAIALRAA-----RDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGL-ALKCDIREEDQV 77 (274)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEE-EEECCTTCHHHH
T ss_pred CCCcEEEEECCCChHHHHHHHHHH-----HCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEE-EEeCCCCCHHHH
Confidence 356899999999999999999999 689999999998754210 024577 899999999988
Q ss_pred HHHHHhccc---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeee
Q 028258 73 ALKLSLISQ---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 137 (211)
Q Consensus 73 ~~~~~~~~~---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y 137 (211)
.+.++.+.. .+|++||+|+... .++...+++|+.++.++++++...+... +..+|+++||...+
T Consensus 78 ~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~iv~isS~~~~ 153 (274)
T 3e03_A 78 RAAVAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQA-PNPHILTLAPPPSL 153 (274)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTS-SSCEEEECCCCCCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhc-CCceEEEECChHhc
Confidence 887765421 3899999998632 1355678999999999988876543111 34678888875443
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.62 E-value=3e-15 Score=121.57 Aligned_cols=121 Identities=12% Similarity=-0.017 Sum_probs=90.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC-C-------CCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-W-------FPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~-~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
++|++|||||+|+||++++++|+ ++|++|+++.++.... . .....+. ++.+|++|++++.++++.+
T Consensus 26 ~~k~~lVTGas~GIG~aia~~la-----~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~v~~~~~~~ 99 (267)
T 3u5t_A 26 TNKVAIVTGASRGIGAAIAARLA-----SDGFTVVINYAGKAAAAEEVAGKIEAAGGKAL-TAQADVSDPAAVRRLFATA 99 (267)
T ss_dssp -CCEEEEESCSSHHHHHHHHHHH-----HHTCEEEEEESSCSHHHHHHHHHHHHTTCCEE-EEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEE-EEEcCCCCHHHHHHHHHHH
Confidence 46899999999999999999999 6899999886654321 0 1135678 8999999999888887654
Q ss_pred cc---ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeee
Q 028258 80 SQ---EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 137 (211)
Q Consensus 80 ~~---~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y 137 (211)
.. .+|++||+|+.... .+...+++|+.++.++++++...+ ..-.+|+++||...+
T Consensus 100 ~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~---~~~g~iv~isS~~~~ 166 (267)
T 3u5t_A 100 EEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRL---RVGGRIINMSTSQVG 166 (267)
T ss_dssp HHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHE---EEEEEEEEECCTHHH
T ss_pred HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHH---hhCCeEEEEeChhhc
Confidence 21 38999999986421 355677899999999998887652 112578888875443
|
| >4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.62 E-value=3e-15 Score=122.08 Aligned_cols=122 Identities=12% Similarity=0.040 Sum_probs=91.6
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
..+|++|||||+|+||++++++|+ ++|++|++++|++.... .....+. ++.+|++|++++.+.++.+
T Consensus 31 l~gk~~lVTGas~GIG~aia~~la-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~~~~~~~~~ 104 (275)
T 4imr_A 31 LRGRTALVTGSSRGIGAAIAEGLA-----GAGAHVILHGVKPGSTAAVQQRIIASGGTAQ-ELAGDLSEAGAGTDLIERA 104 (275)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHH-----HTTCEEEEEESSTTTTHHHHHHHHHTTCCEE-EEECCTTSTTHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHH-----HCCCEEEEEcCCHHHHHHHHHHHHhcCCeEE-EEEecCCCHHHHHHHHHHH
Confidence 346899999999999999999999 68999999999876531 0135678 9999999998877776644
Q ss_pred c--cccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 80 S--QEITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 80 ~--~~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
. ..+|++||+|+... .++...+++|+.++.++++++...+. ..+..+|+++||..
T Consensus 105 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~-~~~~g~Iv~isS~~ 170 (275)
T 4imr_A 105 EAIAPVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMV-ARKWGRVVSIGSIN 170 (275)
T ss_dssp HHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHTCEEEEEECCGG
T ss_pred HHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-hcCCcEEEEECCHH
Confidence 2 13899999998632 14556789999999888888754320 01346888888754
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* | Back alignment and structure |
|---|
Probab=99.62 E-value=2.2e-15 Score=123.92 Aligned_cols=159 Identities=9% Similarity=-0.097 Sum_probs=111.0
Q ss_pred CCCCCeEEEEcCCCh--HHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC------CCCCCceeEEEeeCCCHHHHHHHHH
Q 028258 6 QNPKSVALIIGVTGI--SGLSLAEALKNPTTPGSPWKVYGAARRPPPGW------FPTALVDRYITFDALDPTDTALKLS 77 (211)
Q Consensus 6 ~~~~~~ilVtGatG~--iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~ 77 (211)
...+|++|||||+|+ ||++++++|+ ++|++|++++|++.... .....+. ++.+|++|++++.++++
T Consensus 28 ~l~gk~~lVTGasg~~GIG~aia~~la-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~Dv~d~~~v~~~~~ 101 (293)
T 3grk_A 28 LLQGKRGLILGVANNRSIAWGIAKAAR-----EAGAELAFTYQGDALKKRVEPLAEELGAFV-AGHCDVADAASIDAVFE 101 (293)
T ss_dssp TTTTCEEEEECCCSSSSHHHHHHHHHH-----HTTCEEEEEECSHHHHHHHHHHHHHHTCEE-EEECCTTCHHHHHHHHH
T ss_pred cCCCCEEEEEcCCCCCcHHHHHHHHHH-----HCCCEEEEEcCCHHHHHHHHHHHHhcCCce-EEECCCCCHHHHHHHHH
Confidence 345789999999988 9999999999 68999999998743100 0124578 89999999998888877
Q ss_pred hccc---ccceEEeecccCC-------------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeeccc
Q 028258 78 LISQ---EITNLFWVPLQVQ-------------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPI 141 (211)
Q Consensus 78 ~~~~---~~~~v~~~a~~~~-------------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~ 141 (211)
.+.. .+|++||+|+... .++...+++|+.++.++++++...+ .+-.+|+++||...+..
T Consensus 102 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m---~~~g~Iv~isS~~~~~~-- 176 (293)
T 3grk_A 102 TLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLM---ADGGSILTLTYYGAEKV-- 176 (293)
T ss_dssp HHHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHT---TTCEEEEEEECGGGTSB--
T ss_pred HHHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhc---cCCCEEEEEeehhhccC--
Confidence 5521 3899999998642 1355678999999999999988763 12458888887544321
Q ss_pred CCccccCCCCCCCCCCcCCCCCCCCCCcchhHHH-----HHh---h--cCCCceEEEecCCceEecC
Q 028258 142 FDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELED-----VSA---S--YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 142 ~~~~~~g~~~~~~~~~~e~~~~~~~~~~~~~~e~-----~l~---~--~~~~~~~~i~Rp~~i~G~~ 198 (211)
. +....|...| +.+ . ...++.+..++|+.+..+-
T Consensus 177 -------------------~----~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~ 220 (293)
T 3grk_A 177 -------------------M----PNYNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLA 220 (293)
T ss_dssp -------------------C----TTTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC--
T ss_pred -------------------C----CchHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchh
Confidence 0 0111232222 111 1 3468999999999998764
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.62 E-value=3.4e-15 Score=121.62 Aligned_cols=159 Identities=14% Similarity=0.064 Sum_probs=106.9
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC------CCCCCceeEEEeeCCCHHHHHHHHHhccc-
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW------FPTALVDRYITFDALDPTDTALKLSLISQ- 81 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~- 81 (211)
+|++|||||+|+||++++++|+ ++|++|++++|++.... ....++. ++.+|++|++++.++++.+..
T Consensus 21 ~k~vlVTGas~gIG~aia~~La-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~Dv~d~~~v~~~~~~~~~~ 94 (272)
T 2nwq_A 21 SSTLFITGATSGFGEACARRFA-----EAGWSLVLTGRREERLQALAGELSAKTRVL-PLTLDVRDRAAMSAAVDNLPEE 94 (272)
T ss_dssp CCEEEESSTTTSSHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHTTTSCEE-EEECCTTCHHHHHHHHHTCCGG
T ss_pred CcEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHhhcCCcEE-EEEcCCCCHHHHHHHHHHHHHH
Confidence 3899999999999999999999 68999999999764311 0113678 899999999999999887632
Q ss_pred --ccceEEeecccCC----------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCce-EEEEeecCeeeecccCCccccC
Q 028258 82 --EITNLFWVPLQVQ----------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLR-HVALLTGTKHYMGPIFDPSLAG 148 (211)
Q Consensus 82 --~~~~v~~~a~~~~----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~-~~~~~s~~~~y~~~~~~~~~~g 148 (211)
.+|.+||+|+... .++...+++|+.++.++++++...+... +.. +|+++||...+..
T Consensus 95 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~-~~g~~IV~isS~~~~~~--------- 164 (272)
T 2nwq_A 95 FATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAH-GAGASIVNLGSVAGKWP--------- 164 (272)
T ss_dssp GSSCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-CTTCEEEEECCGGGTSC---------
T ss_pred hCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCcEEEEeCCchhccC---------
Confidence 3799999998632 1355678999999777777665331001 234 8888887543310
Q ss_pred CCCCCCCCCcCCCCCCCCCCcchhH----HHHHhh-----cCCCceEEEecCCceEecC
Q 028258 149 QLMPYEVPFKEDSSRLPFPNFYYEL----EDVSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 149 ~~~~~~~~~~e~~~~~~~~~~~~~~----e~~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
. +....|... +.+.+. ...++++..++|+.+..+-
T Consensus 165 ------------~---~~~~~Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~ 208 (272)
T 2nwq_A 165 ------------Y---PGSHVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEF 208 (272)
T ss_dssp ------------C---TTCHHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC---
T ss_pred ------------C---CCCchHHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcc
Confidence 0 111123221 222211 3468999999999998764
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.62 E-value=6.7e-15 Score=119.88 Aligned_cols=160 Identities=9% Similarity=-0.092 Sum_probs=109.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC--------------------CCCCCCceeEEEeeCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG--------------------WFPTALVDRYITFDAL 67 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~--------------------~~~~~~~~~~i~~Dl~ 67 (211)
.+|++|||||+|+||++++++|+ ++|++|++++|+.... ......+. ++.+|++
T Consensus 10 ~~k~~lVTGas~GIG~a~a~~la-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~ 83 (277)
T 3tsc_A 10 EGRVAFITGAARGQGRAHAVRMA-----AEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIV-AAVVDTR 83 (277)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHH-----HTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEE-EEECCTT
T ss_pred CCCEEEEECCccHHHHHHHHHHH-----HcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEE-EEECCCC
Confidence 46899999999999999999999 6999999999842210 00134677 8899999
Q ss_pred CHHHHHHHHHhccc---ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 68 DPTDTALKLSLISQ---EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 68 d~~~~~~~~~~~~~---~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
|++++.+.++.+.. .+|++||+|+.... ++...+++|+.++.++++++...+.....-.+|+++||..
T Consensus 84 ~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~ 163 (277)
T 3tsc_A 84 DFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAA 163 (277)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGG
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHh
Confidence 99988887765421 38999999986431 4556789999998888887654321011135788888754
Q ss_pred eeecccCCccccCCCCCCCCCCcCCCCCCCCCCcchhHHH-----HHh---h--cCCCceEEEecCCceEecC
Q 028258 136 HYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELED-----VSA---S--YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 136 ~y~~~~~~~~~~g~~~~~~~~~~e~~~~~~~~~~~~~~e~-----~l~---~--~~~~~~~~i~Rp~~i~G~~ 198 (211)
.+.. . +....|...| +.+ . ...++.+..++|+.+..+-
T Consensus 164 ~~~~---------------------~----~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~ 211 (277)
T 3tsc_A 164 GMKM---------------------Q----PFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPM 211 (277)
T ss_dssp GTSC---------------------C----SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGG
T ss_pred hCCC---------------------C----CCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCc
Confidence 4321 0 1111232222 111 1 3468999999999998763
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.61 E-value=1.5e-15 Score=123.54 Aligned_cols=123 Identities=15% Similarity=0.019 Sum_probs=91.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHhcc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSLIS 80 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~ 80 (211)
.+|++|||||+|+||++++++|+ ++|++|++++|+..... .....+. .+.+|++|++++.+.++.+.
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~Dv~d~~~v~~~~~~~~ 100 (270)
T 3ftp_A 27 DKQVAIVTGASRGIGRAIALELA-----RRGAMVIGTATTEAGAEGIGAAFKQAGLEGR-GAVLNVNDATAVDALVESTL 100 (270)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHH-----HTTCEEEEEESSHHHHHHHHHHHHHHTCCCE-EEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEE-EEEEeCCCHHHHHHHHHHHH
Confidence 46899999999999999999999 68999999999764311 0124677 89999999998887776542
Q ss_pred c---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeee
Q 028258 81 Q---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 137 (211)
Q Consensus 81 ~---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y 137 (211)
. .+|++||+|+... .++...+++|+.++.++++++...+... +-.+|+++||...+
T Consensus 101 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv~isS~~~~ 168 (270)
T 3ftp_A 101 KEFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKA-RGGRIVNITSVVGS 168 (270)
T ss_dssp HHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCHHHH
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCCEEEEECchhhC
Confidence 1 2899999998632 1456678999999999888775431000 23578888875443
|
| >4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A | Back alignment and structure |
|---|
Probab=99.61 E-value=3.6e-15 Score=121.10 Aligned_cols=159 Identities=19% Similarity=0.080 Sum_probs=109.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC--------CCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW--------FPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~--------~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
.+|++|||||+|+||++++++|+ ++|++|++++|+..... .....+. ++.+|++|++++.++++.+
T Consensus 28 ~~k~vlITGas~gIG~~la~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~v~~~~~~~ 101 (271)
T 4iin_A 28 TGKNVLITGASKGIGAEIAKTLA-----SMGLKVWINYRSNAEVADALKNELEEKGYKAA-VIKFDAASESDFIEAIQTI 101 (271)
T ss_dssp SCCEEEETTCSSHHHHHHHHHHH-----HTTCEEEEEESSCHHHHHHHHHHHHHTTCCEE-EEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHH-----HCCCEEEEEeCCCHHHHHHHHHHHHhcCCceE-EEECCCCCHHHHHHHHHHH
Confidence 46899999999999999999999 68999999999643210 0134678 9999999999888877654
Q ss_pred cc---ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCcccc
Q 028258 80 SQ---EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLA 147 (211)
Q Consensus 80 ~~---~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~ 147 (211)
.. .+|++||+|+.... ++...+++|+.++.++++++...+. ..+..+|+++||...+...
T Consensus 102 ~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-~~~~g~iv~isS~~~~~~~------- 173 (271)
T 4iin_A 102 VQSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMS-KSRFGSVVNVASIIGERGN------- 173 (271)
T ss_dssp HHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHTCEEEEEECCHHHHHCC-------
T ss_pred HHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHh-hcCCCEEEEEechhhcCCC-------
Confidence 21 38999999987431 3556789999988887777654320 0134688888875433210
Q ss_pred CCCCCCCCCCcCCCCCCCCCCcchhHHH-----HHhh-----cCCCceEEEecCCceEecC
Q 028258 148 GQLMPYEVPFKEDSSRLPFPNFYYELED-----VSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 148 g~~~~~~~~~~e~~~~~~~~~~~~~~e~-----~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
++...|...| +.+. ...++.+..++|+.+..+-
T Consensus 174 ------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~ 216 (271)
T 4iin_A 174 ------------------MGQTNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDM 216 (271)
T ss_dssp ------------------TTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC-
T ss_pred ------------------CCchHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCc
Confidence 1111232222 1111 3578999999999997764
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=1.2e-15 Score=125.36 Aligned_cols=127 Identities=13% Similarity=0.014 Sum_probs=90.2
Q ss_pred ccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEe-CCCCCCC--------CCCCCceeEEEeeCCCHH----
Q 028258 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAA-RRPPPGW--------FPTALVDRYITFDALDPT---- 70 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~-R~~~~~~--------~~~~~~~~~i~~Dl~d~~---- 70 (211)
|..+.+|++|||||+|+||++++++|+ ++|++|++++ |++.... ....++. ++.+|++|++
T Consensus 4 m~~l~~k~~lVTGas~GIG~aia~~la-----~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~-~~~~Dl~~~~~~~~ 77 (291)
T 1e7w_A 4 MTAPTVPVALVTGAAKRLGRSIAEGLH-----AEGYAVCLHYHRSAAEANALSATLNARRPNSAI-TVQADLSNVATAPV 77 (291)
T ss_dssp ----CCCEEEETTCSSHHHHHHHHHHH-----HTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEE-EEECCCSSSCBCCC
T ss_pred ccCCCCCEEEEECCCchHHHHHHHHHH-----HCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeE-EEEeecCCcccccc
Confidence 444567899999999999999999999 6899999999 8754210 0134678 8999999998
Q ss_pred -------------HHHHHHHhccc---ccceEEeecccCC-----------------------chhHHHHhhcHHHHHHH
Q 028258 71 -------------DTALKLSLISQ---EITNLFWVPLQVQ-----------------------ESEEVNIFKNSTMLKNV 111 (211)
Q Consensus 71 -------------~~~~~~~~~~~---~~~~v~~~a~~~~-----------------------~~~~~~~~~n~~~~~~l 111 (211)
++.++++.+.. .+|++||+|+... ..+...+++|+.++.++
T Consensus 78 ~~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l 157 (291)
T 1e7w_A 78 SGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFL 157 (291)
T ss_dssp C----CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHH
T ss_pred cccccccccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHH
Confidence 88777765421 2899999998632 12345678999999888
Q ss_pred HHHHHhcCCCCCC-----ceEEEEeecCee
Q 028258 112 LSVLVSSNSGRSR-----LRHVALLTGTKH 136 (211)
Q Consensus 112 ~~~~~~~~~~~~~-----~~~~~~~s~~~~ 136 (211)
++++...+..... ..+|+++||...
T Consensus 158 ~~~~~~~m~~~~~~~~~~~g~Iv~isS~~~ 187 (291)
T 1e7w_A 158 IKAFAHRVAGTPAKHRGTNYSIINMVDAMT 187 (291)
T ss_dssp HHHHHHHHHTSCGGGSCSCEEEEEECCTTT
T ss_pred HHHHHHHHHhcCCCCCCCCcEEEEEechhh
Confidence 8887654311110 468888887543
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.61 E-value=1.3e-14 Score=119.61 Aligned_cols=161 Identities=11% Similarity=-0.068 Sum_probs=110.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------------------CCCCCceeEEEeeCCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------------------FPTALVDRYITFDALD 68 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------------------~~~~~~~~~i~~Dl~d 68 (211)
.+|++|||||+|+||++++++|+ ++|++|++++|++.... .....+. ++.+|++|
T Consensus 27 ~gk~~lVTGas~GIG~aia~~la-----~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dv~~ 100 (299)
T 3t7c_A 27 EGKVAFITGAARGQGRSHAITLA-----REGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRII-ASQVDVRD 100 (299)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHH-----HTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEE-EEECCTTC
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-----HCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceE-EEECCCCC
Confidence 46899999999999999999999 69999999998743110 0135678 89999999
Q ss_pred HHHHHHHHHhccc---ccceEEeecccCC----------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 69 PTDTALKLSLISQ---EITNLFWVPLQVQ----------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 69 ~~~~~~~~~~~~~---~~~~v~~~a~~~~----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
++++.++++.+.. .+|++||+|+... .++...+++|+.++.++++++...+....+..+|+++||..
T Consensus 101 ~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~ 180 (299)
T 3t7c_A 101 FDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIG 180 (299)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGG
T ss_pred HHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChh
Confidence 9988887765421 3899999998532 13566789999999898887754321011246888888754
Q ss_pred eeecccCCccccCCCCCCCCCCcCCCCCCCCCCcchhH----HHHHh---h--cCCCceEEEecCCceEecC
Q 028258 136 HYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYEL----EDVSA---S--YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 136 ~y~~~~~~~~~~g~~~~~~~~~~e~~~~~~~~~~~~~~----e~~l~---~--~~~~~~~~i~Rp~~i~G~~ 198 (211)
.+.. . +....|... +.+.+ . ...|+.+..++|+.+..+-
T Consensus 181 ~~~~---------------------~---~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~ 228 (299)
T 3t7c_A 181 GLRG---------------------A---ENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPM 228 (299)
T ss_dssp GTSC---------------------C---TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTT
T ss_pred hccC---------------------C---CCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCcc
Confidence 3321 0 011123221 11111 1 3468999999999998764
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=9.1e-16 Score=121.87 Aligned_cols=104 Identities=17% Similarity=0.014 Sum_probs=81.3
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC--------CCCCCceeEEEeeCCCHHHHHHHHHhcc
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW--------FPTALVDRYITFDALDPTDTALKLSLIS 80 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~--------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~ 80 (211)
+|++|||||+|+||++++++|+ ++|++|++++|+..+.. .....+. ++.+|++|++++.++++.+.
T Consensus 2 ~k~vlITGas~gIG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~v~~~~~~~~ 75 (235)
T 3l77_A 2 MKVAVITGASRGIGEAIARALA-----RDGYALALGARSVDRLEKIAHELMQEQGVEVF-YHHLDVSKAESVEEFSKKVL 75 (235)
T ss_dssp CCEEEEESCSSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHHHHHCCCEE-EEECCTTCHHHHHHHCC-HH
T ss_pred CCEEEEECCCcHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEE-EEEeccCCHHHHHHHHHHHH
Confidence 4889999999999999999999 69999999999764311 0135678 89999999999888766442
Q ss_pred c---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhc
Q 028258 81 Q---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 81 ~---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
. .+|++||+|+... .++...+++|+.++.++++++...
T Consensus 76 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~ 125 (235)
T 3l77_A 76 ERFGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDS 125 (235)
T ss_dssp HHHSSCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred HhcCCCCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 2899999998642 145567899999999988887653
|
| >4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=99.61 E-value=1.5e-14 Score=115.73 Aligned_cols=118 Identities=9% Similarity=-0.046 Sum_probs=95.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-CCCCCceeEEEeeCCCHHHHHHHHHhcccccceE
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-FPTALVDRYITFDALDPTDTALKLSLISQEITNL 86 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v 86 (211)
.+|++|||||++.||++++++|+ ++|++|++++|+.+... .....+. .+.+|++|++++++.++.+.. +|++
T Consensus 10 ~GK~alVTGas~GIG~aia~~la-----~~Ga~Vv~~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~v~~~~~~~g~-iDiL 82 (242)
T 4b79_A 10 AGQQVLVTGGSSGIGAAIAMQFA-----ELGAEVVALGLDADGVHAPRHPRIR-REELDITDSQRLQRLFEALPR-LDVL 82 (242)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESSTTSTTSCCCTTEE-EEECCTTCHHHHHHHHHHCSC-CSEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEeCCHHHHhhhhcCCeE-EEEecCCCHHHHHHHHHhcCC-CCEE
Confidence 48999999999999999999999 79999999999876532 2356788 899999999999999988865 9999
Q ss_pred EeecccCCc-------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 87 FWVPLQVQE-------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 87 ~~~a~~~~~-------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
+|+|+...+ +|+..+++|+.++..+.+++...+... -.+++.+||.
T Consensus 83 VNNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~--~G~IVnisS~ 135 (242)
T 4b79_A 83 VNNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQR--GGSILNIASM 135 (242)
T ss_dssp EECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--CEEEEEECCG
T ss_pred EECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc--CCeEEEEeec
Confidence 999987432 566778999998888777766543111 2578888774
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.61 E-value=6.5e-15 Score=118.96 Aligned_cols=122 Identities=11% Similarity=-0.040 Sum_probs=91.5
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC-C-------CCCCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP-G-------WFPTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~-~-------~~~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
..+|++|||||+|+||++++++|+ ++|++|+++.++... . ......+. ++.+|++|++++.++++.
T Consensus 6 l~~k~vlVTGas~GIG~aia~~la-----~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~v~~~~~~ 79 (259)
T 3edm_A 6 FTNRTIVVAGAGRDIGRACAIRFA-----QEGANVVLTYNGAAEGAATAVAEIEKLGRSAL-AIKADLTNAAEVEAAISA 79 (259)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEECSSCHHHHHHHHHHHTTTSCCE-EEECCTTCHHHHHHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHH-----HCCCEEEEEcCCCHHHHHHHHHHHHhcCCceE-EEEcCCCCHHHHHHHHHH
Confidence 457899999999999999999999 689999988554432 0 01235678 999999999988887765
Q ss_pred ccc---ccceEEeecccC-C---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeee
Q 028258 79 ISQ---EITNLFWVPLQV-Q---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 137 (211)
Q Consensus 79 ~~~---~~~~v~~~a~~~-~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y 137 (211)
+.. .+|.+||+|+.. . ..+...+++|+.++.++++++...+ .+-.+|+++||...+
T Consensus 80 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~---~~~g~iv~isS~~~~ 148 (259)
T 3edm_A 80 AADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKM---AKGGAIVTFSSQAGR 148 (259)
T ss_dssp HHHHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGE---EEEEEEEEECCHHHH
T ss_pred HHHHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHH---hcCCEEEEEcCHHhc
Confidence 421 289999999753 1 1345678999999999999988762 112478888875443
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.61 E-value=3e-15 Score=120.51 Aligned_cols=160 Identities=13% Similarity=0.026 Sum_probs=109.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCC--CcEEEEEeCCCCCCC----CCCCCceeEEEeeCCCHHHHHHHHHhccc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGS--PWKVYGAARRPPPGW----FPTALVDRYITFDALDPTDTALKLSLISQ 81 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~--g~~V~~~~R~~~~~~----~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~ 81 (211)
|+|++|||||+|+||++++++|+ +. ++.|++++|+..... ....++. ++.+|++|++++.+.++.+..
T Consensus 1 Mgk~~lVTGas~GIG~aia~~l~-----~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~v~~~~~~~~~ 74 (254)
T 3kzv_A 1 MGKVILVTGVSRGIGKSIVDVLF-----SLDKDTVVYGVARSEAPLKKLKEKYGDRFF-YVVGDITEDSVLKQLVNAAVK 74 (254)
T ss_dssp -CCEEEECSTTSHHHHHHHHHHH-----HHCSSCEEEEEESCHHHHHHHHHHHGGGEE-EEESCTTSHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHH-----hcCCCeEEEEecCCHHHHHHHHHHhCCceE-EEECCCCCHHHHHHHHHHHHH
Confidence 56899999999999999999998 34 588999998765311 0124678 899999999988887765421
Q ss_pred ---ccceEEeecccCC----------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccC
Q 028258 82 ---EITNLFWVPLQVQ----------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAG 148 (211)
Q Consensus 82 ---~~~~v~~~a~~~~----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g 148 (211)
.+|++||+|+... .++...+++|+.++.++++++...+... + .+|+++||...+..
T Consensus 75 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~-~-g~iv~isS~~~~~~--------- 143 (254)
T 3kzv_A 75 GHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKT-N-GNVVFVSSDACNMY--------- 143 (254)
T ss_dssp HHSCCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-T-CEEEEECCSCCCCS---------
T ss_pred hcCCccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-C-CeEEEEcCchhccC---------
Confidence 3899999998632 1355678999999999888874332101 2 57888887544321
Q ss_pred CCCCCCCCCcCCCCCCCCCCcchhHHH-----HHhh---cCCCceEEEecCCceEecCCC
Q 028258 149 QLMPYEVPFKEDSSRLPFPNFYYELED-----VSAS---YSPAITYSVHRSSVIIGASPR 200 (211)
Q Consensus 149 ~~~~~~~~~~e~~~~~~~~~~~~~~e~-----~l~~---~~~~~~~~i~Rp~~i~G~~~~ 200 (211)
.+....|...| +.+. +..++.+..++|+.+..+-..
T Consensus 144 ----------------~~~~~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~ 187 (254)
T 3kzv_A 144 ----------------FSSWGAYGSSKAALNHFAMTLANEERQVKAIAVAPGIVDTDMQV 187 (254)
T ss_dssp ----------------SCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEEEECSSCCCCCSC
T ss_pred ----------------CCCcchHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcccchhHH
Confidence 01122233222 2111 347899999999999877543
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.61 E-value=1e-15 Score=127.94 Aligned_cols=161 Identities=12% Similarity=0.012 Sum_probs=108.4
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEe-CCCCCCC--------CCCCCceeEEEeeCCCHH-------
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAA-RRPPPGW--------FPTALVDRYITFDALDPT------- 70 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~-R~~~~~~--------~~~~~~~~~i~~Dl~d~~------- 70 (211)
+.+|++|||||+|+||++++++|+ ++|++|++++ |++.... ....++. ++.+|++|++
T Consensus 44 l~~k~~lVTGas~GIG~aia~~La-----~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~-~~~~Dl~d~~~~~~~~~ 117 (328)
T 2qhx_A 44 PTVPVALVTGAAKRLGRSIAEGLH-----AEGYAVCLHYHRSAAEANALSATLNARRPNSAI-TVQADLSNVATAPVSGA 117 (328)
T ss_dssp -CCCEEEETTCSSHHHHHHHHHHH-----HTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEE-EEECCCSSSCBCC----
T ss_pred cCCCEEEEECCCCHHHHHHHHHHH-----HCCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEE-EEEeeCCCchhcccccc
Confidence 456899999999999999999999 6899999999 7653210 0124678 8999999998
Q ss_pred ----------HHHHHHHhccc---ccceEEeecccCC-----------------------chhHHHHhhcHHHHHHHHHH
Q 028258 71 ----------DTALKLSLISQ---EITNLFWVPLQVQ-----------------------ESEEVNIFKNSTMLKNVLSV 114 (211)
Q Consensus 71 ----------~~~~~~~~~~~---~~~~v~~~a~~~~-----------------------~~~~~~~~~n~~~~~~l~~~ 114 (211)
++.++++.+.. .+|++||+|+... .++...+++|+.++.+++++
T Consensus 118 ~~~~~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ 197 (328)
T 2qhx_A 118 DGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKA 197 (328)
T ss_dssp ---CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHH
T ss_pred ccccccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHH
Confidence 88777765421 2899999998632 12334678999998888887
Q ss_pred HHhcCCCCCC-----ceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCCCCCCCCCcchhHHH-----HHhh-----
Q 028258 115 LVSSNSGRSR-----LRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELED-----VSAS----- 179 (211)
Q Consensus 115 ~~~~~~~~~~-----~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~~~~~~~~~~~~~e~-----~l~~----- 179 (211)
+...+..... ..+|+++||...+.. . +....|...| +.+.
T Consensus 198 ~~~~m~~~~~~~~~~~g~IV~isS~~~~~~---------------------~----~~~~~Y~asKaal~~l~~~la~el 252 (328)
T 2qhx_A 198 FAHRVAGTPAKHRGTNYSIINMVDAMTNQP---------------------L----LGYTIYTMAKGALEGLTRSAALEL 252 (328)
T ss_dssp HHHHHHHSCGGGSCSCEEEEEECCTTTTSC---------------------C----TTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCcCCCCCcEEEEECchhhccC---------------------C----CCcHHHHHHHHHHHHHHHHHHHHH
Confidence 7643210110 468888887543310 0 1112232222 1111
Q ss_pred cCCCceEEEecCCceEecC
Q 028258 180 YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 180 ~~~~~~~~i~Rp~~i~G~~ 198 (211)
...++.+..++|+.+..+.
T Consensus 253 ~~~gIrvn~v~PG~v~T~~ 271 (328)
T 2qhx_A 253 APLQIRVNGVGPGLSVLVD 271 (328)
T ss_dssp GGGTEEEEEEEESSBSCCC
T ss_pred hhcCcEEEEEecCcccCCc
Confidence 3468999999999998764
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.60 E-value=4e-15 Score=120.09 Aligned_cols=159 Identities=8% Similarity=-0.062 Sum_probs=106.8
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----C--CCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----F--PTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----~--~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
+++|++|||||+|+||++++++|+ ++|++|++++|++.... . ...++. ++.+|++|++++.++++.+
T Consensus 3 l~~k~vlVTGas~gIG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~v~~~~~~~ 76 (260)
T 2qq5_A 3 MNGQVCVVTGASRGIGRGIALQLC-----KAGATVYITGRHLDTLRVVAQEAQSLGGQCV-PVVCDSSQESEVRSLFEQV 76 (260)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHHHHSSEEE-EEECCTTSHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCchHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHHcCCceE-EEECCCCCHHHHHHHHHHH
Confidence 346899999999999999999999 68999999999754311 0 124577 8999999999888877664
Q ss_pred c----cccceEEeecc--cC--------------CchhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeec
Q 028258 80 S----QEITNLFWVPL--QV--------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMG 139 (211)
Q Consensus 80 ~----~~~~~v~~~a~--~~--------------~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~ 139 (211)
. ..+|++||+|+ .. ...+...+++|+.++.++.+++...+... +..+|+++||...+..
T Consensus 77 ~~~~~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~ 155 (260)
T 2qq5_A 77 DREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPA-GQGLIVVISSPGSLQY 155 (260)
T ss_dssp HHHHTTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGG-TCCEEEEECCGGGTSC
T ss_pred HHhcCCCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhc-CCcEEEEEcChhhcCC
Confidence 1 13899999993 11 12455677889888777666554321001 3468888887543210
Q ss_pred ccCCccccCCCCCCCCCCcCCCCCCCCCCcchhHHH-----HHhh-----cCCCceEEEecCCceEecC
Q 028258 140 PIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELED-----VSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 140 ~~~~~~~~g~~~~~~~~~~e~~~~~~~~~~~~~~e~-----~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
.+...|...| +.+. ...++++.+++|+.+..+-
T Consensus 156 --------------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~ 198 (260)
T 2qq5_A 156 --------------------------MFNVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTEL 198 (260)
T ss_dssp --------------------------CSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTT
T ss_pred --------------------------CCCCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHH
Confidence 0112232222 2111 3468999999999997764
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.60 E-value=8.2e-15 Score=117.07 Aligned_cols=121 Identities=12% Similarity=-0.006 Sum_probs=89.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC--------CCCCCceeEEEeeC--CCHHHHHHHHH
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW--------FPTALVDRYITFDA--LDPTDTALKLS 77 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~--------~~~~~~~~~i~~Dl--~d~~~~~~~~~ 77 (211)
.+|++|||||+|+||++++++|+ ++|++|++++|++.... ....... ++.+|+ +|.+++.+.++
T Consensus 13 ~~k~vlITGas~gIG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~d~d~~~~~~~~~~~~ 86 (247)
T 3i1j_A 13 KGRVILVTGAARGIGAAAARAYA-----AHGASVVLLGRTEASLAEVSDQIKSAGQPQPL-IIALNLENATAQQYRELAA 86 (247)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHHHTTSCCCE-EEECCTTTCCHHHHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHH-----HCCCEEEEEecCHHHHHHHHHHHHhcCCCCce-EEEeccccCCHHHHHHHHH
Confidence 46899999999999999999999 68999999999865310 1124567 778887 89888877776
Q ss_pred hccc---ccceEEeecccCC----------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 78 LISQ---EITNLFWVPLQVQ----------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 78 ~~~~---~~~~v~~~a~~~~----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
.+.. .+|++||+|+... .++...+++|+.++.++++++...+... +..+|+++||..
T Consensus 87 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~~~iv~isS~~ 156 (247)
T 3i1j_A 87 RVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRS-EDASIAFTSSSV 156 (247)
T ss_dssp HHHHHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTS-SSEEEEEECCGG
T ss_pred HHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC-CCCeEEEEcchh
Confidence 5421 3899999998631 1355678999999999998885432111 346888887753
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.60 E-value=3.5e-15 Score=120.67 Aligned_cols=160 Identities=10% Similarity=-0.101 Sum_probs=108.6
Q ss_pred CCCCCeEEEEcCC--ChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC------CCCCCceeEEEeeCCCHHHHHHHHH
Q 028258 6 QNPKSVALIIGVT--GISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW------FPTALVDRYITFDALDPTDTALKLS 77 (211)
Q Consensus 6 ~~~~~~ilVtGat--G~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~ 77 (211)
...+|++|||||+ |+||++++++|+ ++|++|++++|+..... ...+.+. ++.+|++|++++.+.++
T Consensus 11 ~~~~k~vlITGa~~~~giG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~v~~~~~ 84 (271)
T 3ek2_A 11 FLDGKRILLTGLLSNRSIAYGIAKACK-----REGAELAFTYVGDRFKDRITEFAAEFGSEL-VFPCDVADDAQIDALFA 84 (271)
T ss_dssp TTTTCEEEECCCCSTTSHHHHHHHHHH-----HTTCEEEEEESSGGGHHHHHHHHHHTTCCC-EEECCTTCHHHHHHHHH
T ss_pred ccCCCEEEEeCCCCCCcHHHHHHHHHH-----HcCCCEEEEecchhhHHHHHHHHHHcCCcE-EEECCCCCHHHHHHHHH
Confidence 4457999999999 999999999999 68999999999743210 0124578 99999999998888877
Q ss_pred hccc---ccceEEeecccCC--------------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecc
Q 028258 78 LISQ---EITNLFWVPLQVQ--------------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGP 140 (211)
Q Consensus 78 ~~~~---~~~~v~~~a~~~~--------------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~ 140 (211)
.+.. .+|++||+|+... .++...+++|+.++.++++++...+ .+-.+|+++||...+..
T Consensus 85 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~g~iv~isS~~~~~~- 160 (271)
T 3ek2_A 85 SLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPML---SDDASLLTLSYLGAERA- 160 (271)
T ss_dssp HHHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGE---EEEEEEEEEECGGGTSB-
T ss_pred HHHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHh---ccCceEEEEeccccccC-
Confidence 6521 3899999998632 1345577999999999999887652 12347788877543311
Q ss_pred cCCccccCCCCCCCCCCcCCCCCCCCCCcchhH----HHH---Hhh--cCCCceEEEecCCceEecC
Q 028258 141 IFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYEL----EDV---SAS--YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 141 ~~~~~~~g~~~~~~~~~~e~~~~~~~~~~~~~~----e~~---l~~--~~~~~~~~i~Rp~~i~G~~ 198 (211)
. +....|... +.+ +.. ...++.+..++|+.+..+-
T Consensus 161 --------------------~---~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~ 204 (271)
T 3ek2_A 161 --------------------I---PNYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLA 204 (271)
T ss_dssp --------------------C---TTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC----
T ss_pred --------------------C---CCccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchh
Confidence 0 011122221 111 111 3578999999999998753
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.60 E-value=4e-15 Score=119.36 Aligned_cols=161 Identities=10% Similarity=-0.062 Sum_probs=109.8
Q ss_pred cCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC-CCC-------CCCCCceeEEEeeCCCHHHHHHHH
Q 028258 5 DQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP-PGW-------FPTALVDRYITFDALDPTDTALKL 76 (211)
Q Consensus 5 ~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~-~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~ 76 (211)
+|+.+|++|||||+|+||++++++|+ ++|++|+++.++.. ... .....+. ++.+|++|.+++...+
T Consensus 3 ~~l~~k~vlITGas~gIG~~~a~~l~-----~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~ 76 (255)
T 3icc_A 3 SMLKGKVALVTGASRGIGRAIAKRLA-----NDGALVAIHYGNRKEEAEETVYEIQSNGGSAF-SIGANLESLHGVEALY 76 (255)
T ss_dssp CTTTTCEEEETTCSSHHHHHHHHHHH-----HTTCEEEEEESSCSHHHHHHHHHHHHTTCEEE-EEECCTTSHHHHHHHH
T ss_pred CccCCCEEEEECCCChHHHHHHHHHH-----HCCCeEEEEeCCchHHHHHHHHHHHhcCCceE-EEecCcCCHHHHHHHH
Confidence 44567999999999999999999999 68999988755433 210 1134677 8899999998887777
Q ss_pred Hhccc---------ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeee
Q 028258 77 SLISQ---------EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYM 138 (211)
Q Consensus 77 ~~~~~---------~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~ 138 (211)
+.+.. .+|++||+|+.... .+...+++|+.++.++++++...+ .+-.+|+++||...+.
T Consensus 77 ~~~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~---~~~~~iv~isS~~~~~ 153 (255)
T 3icc_A 77 SSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRL---RDNSRIINISSAATRI 153 (255)
T ss_dssp HHHHHHHHHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTE---EEEEEEEEECCGGGTS
T ss_pred HHHHHHhcccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhh---CCCCEEEEeCChhhcc
Confidence 65431 17999999986321 345567899999999999887652 1235788887754332
Q ss_pred cccCCccccCCCCCCCCCCcCCCCCCCCCCcchhHHH-----HHhh-----cCCCceEEEecCCceEecCC
Q 028258 139 GPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELED-----VSAS-----YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 139 ~~~~~~~~~g~~~~~~~~~~e~~~~~~~~~~~~~~e~-----~l~~-----~~~~~~~~i~Rp~~i~G~~~ 199 (211)
. . +....|...| +.+. ...++.+..++|+.+..+-.
T Consensus 154 ~---------------------~----~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~ 199 (255)
T 3icc_A 154 S---------------------L----PDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMN 199 (255)
T ss_dssp C---------------------C----TTBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSS
T ss_pred C---------------------C----CCcchhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccch
Confidence 1 0 1112233222 1111 34689999999999977643
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.60 E-value=1.6e-15 Score=124.48 Aligned_cols=158 Identities=17% Similarity=0.082 Sum_probs=110.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCc---EEEEEeCCCCCCC---------CCCCCceeEEEeeCCCHHHHHHH
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPW---KVYGAARRPPPGW---------FPTALVDRYITFDALDPTDTALK 75 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~---~V~~~~R~~~~~~---------~~~~~~~~~i~~Dl~d~~~~~~~ 75 (211)
.+|++|||||+|+||++++++|+ ++|+ +|++++|+..... .....+. ++.+|++|++++.++
T Consensus 32 ~~k~~lVTGas~GIG~aia~~l~-----~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~-~~~~Dv~d~~~v~~~ 105 (287)
T 3rku_A 32 AKKTVLITGASAGIGKATALEYL-----EASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVH-VAQLDITQAEKIKPF 105 (287)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHH-----HHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEE-EEECCTTCGGGHHHH
T ss_pred CCCEEEEecCCChHHHHHHHHHH-----HcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEE-EEECCCCCHHHHHHH
Confidence 46899999999999999999999 5776 9999999765311 0134677 899999999999999
Q ss_pred HHhccc---ccceEEeecccCC----------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccC
Q 028258 76 LSLISQ---EITNLFWVPLQVQ----------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIF 142 (211)
Q Consensus 76 ~~~~~~---~~~~v~~~a~~~~----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~ 142 (211)
++.+.. .+|++||+|+... .++...+++|+.++.++++++...+... +..+|+++||...+..
T Consensus 106 ~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~IV~isS~~~~~~--- 181 (287)
T 3rku_A 106 IENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAK-NSGDIVNLGSIAGRDA--- 181 (287)
T ss_dssp HHTSCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEECCGGGTSC---
T ss_pred HHHHHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEEECChhhcCC---
Confidence 887632 3899999998532 1456678999999999888875321001 3367888887543211
Q ss_pred CccccCCCCCCCCCCcCCCCCCCCCCcchhHHH-----HHh---h--cCCCceEEEecCCceEec
Q 028258 143 DPSLAGQLMPYEVPFKEDSSRLPFPNFYYELED-----VSA---S--YSPAITYSVHRSSVIIGA 197 (211)
Q Consensus 143 ~~~~~g~~~~~~~~~~e~~~~~~~~~~~~~~e~-----~l~---~--~~~~~~~~i~Rp~~i~G~ 197 (211)
. +....|...| +.+ . ...++.+..++|+.+..+
T Consensus 182 ------------------~----~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~ 224 (287)
T 3rku_A 182 ------------------Y----PTGSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETE 224 (287)
T ss_dssp ------------------C----TTCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESS
T ss_pred ------------------C----CCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCc
Confidence 0 1112232222 111 1 357899999999999875
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... | Back alignment and structure |
|---|
Probab=99.59 E-value=9.9e-15 Score=121.90 Aligned_cols=121 Identities=16% Similarity=0.130 Sum_probs=89.9
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------------CCCCCceeEEEeeCCCHHHHHHH
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------------FPTALVDRYITFDALDPTDTALK 75 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------------~~~~~~~~~i~~Dl~d~~~~~~~ 75 (211)
+|++|||||||+||++++++|+ ++|++|+++.|+..... ....++. ++.+|++|++++.++
T Consensus 2 ~k~vlVTGas~GIG~ala~~L~-----~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dv~d~~~v~~~ 75 (327)
T 1jtv_A 2 RTVVLITGCSSGIGLHLAVRLA-----SDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLE-TLQLDVRDSKSVAAA 75 (327)
T ss_dssp CEEEEESCCSSHHHHHHHHHHH-----TCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEE-EEECCTTCHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHH-----HCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceE-EEEecCCCHHHHHHH
Confidence 4789999999999999999999 68999888877543211 0124678 899999999999999
Q ss_pred HHhccc-ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCee
Q 028258 76 LSLISQ-EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKH 136 (211)
Q Consensus 76 ~~~~~~-~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~ 136 (211)
++.+.. .+|++||+|+... .++...+++|+.++.++++++...+. ..+..+|+++||...
T Consensus 76 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~-~~~~g~IV~isS~~~ 145 (327)
T 1jtv_A 76 RERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMK-RRGSGRVLVTGSVGG 145 (327)
T ss_dssp HHTCTTSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHTCEEEEEEEEGGG
T ss_pred HHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-hcCCCEEEEECCccc
Confidence 887531 3899999997632 13556789999999999888643210 013578888888543
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... | Back alignment and structure |
|---|
Probab=99.59 E-value=4.7e-15 Score=121.26 Aligned_cols=122 Identities=11% Similarity=-0.036 Sum_probs=88.7
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCC--------CCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF--------PTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~--------~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
+.+|++|||||||+||++++++|+ ++|++|++++|++.+... ....++ ++.+|++|++++.+.++.
T Consensus 26 ~~~k~vlITGasggIG~~la~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~v~~~~~~ 99 (286)
T 1xu9_A 26 LQGKKVIVTGASKGIGREMAYHLA-----KMGAHVVVTARSKETLQKVVSHCLELGAASAH-YIAGTMEDMTFAEQFVAQ 99 (286)
T ss_dssp GTTCEEEESSCSSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHHHHTCSEEE-EEECCTTCHHHHHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHHHHhCCCceE-EEeCCCCCHHHHHHHHHH
Confidence 346899999999999999999999 689999999997653110 113578 899999999888877765
Q ss_pred ccc---ccceEEee-cccCC--------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCee
Q 028258 79 ISQ---EITNLFWV-PLQVQ--------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKH 136 (211)
Q Consensus 79 ~~~---~~~~v~~~-a~~~~--------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~ 136 (211)
+.. .+|++||+ ++... ..+...+++|+.++.++++++...+. .+..+|+++||...
T Consensus 100 ~~~~~g~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~--~~~g~iv~isS~~~ 167 (286)
T 1xu9_A 100 AGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLK--QSNGSIVVVSSLAG 167 (286)
T ss_dssp HHHHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHH--HHTCEEEEEEEGGG
T ss_pred HHHHcCCCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHH--HCCCEEEEECCccc
Confidence 421 28999999 45422 13455789999999888887765310 01257888887543
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* | Back alignment and structure |
|---|
Probab=99.59 E-value=6.7e-15 Score=118.61 Aligned_cols=123 Identities=15% Similarity=0.017 Sum_probs=91.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCC---CCcEEEEEeCCCCCCC-----C----CCCCceeEEEeeCCCHHHHHHH
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPG---SPWKVYGAARRPPPGW-----F----PTALVDRYITFDALDPTDTALK 75 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~---~g~~V~~~~R~~~~~~-----~----~~~~~~~~i~~Dl~d~~~~~~~ 75 (211)
.+|++|||||+|+||++++++|+ + +|++|++++|++.... . ....+. ++.+|++|++++.++
T Consensus 5 ~~k~~lVTGas~gIG~~ia~~l~-----~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~-~~~~Dv~~~~~v~~~ 78 (259)
T 1oaa_A 5 GCAVCVLTGASRGFGRALAPQLA-----RLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVV-LAAADLGTEAGVQRL 78 (259)
T ss_dssp BSEEEEESSCSSHHHHHHHHHHH-----TTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEE-EEECCTTSHHHHHHH
T ss_pred CCcEEEEeCCCChHHHHHHHHHH-----HhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEE-EEecCCCCHHHHHHH
Confidence 46889999999999999999999 5 7999999999764311 0 134577 899999999988888
Q ss_pred HHhccc-----ccc--eEEeecccCC------------chhHHHHhhcHHHHHHHHHHHHhcCCCC-CCceEEEEeecCe
Q 028258 76 LSLISQ-----EIT--NLFWVPLQVQ------------ESEEVNIFKNSTMLKNVLSVLVSSNSGR-SRLRHVALLTGTK 135 (211)
Q Consensus 76 ~~~~~~-----~~~--~v~~~a~~~~------------~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~~~~~~s~~~ 135 (211)
++.+.. .+| ++||+|+... .++...+++|+.++.++++++...+... .+..+|+++||..
T Consensus 79 ~~~~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~ 158 (259)
T 1oaa_A 79 LSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLC 158 (259)
T ss_dssp HHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGG
T ss_pred HHHHHhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCch
Confidence 766522 256 9999998531 1344577999999999999987764211 1246788888754
Q ss_pred e
Q 028258 136 H 136 (211)
Q Consensus 136 ~ 136 (211)
.
T Consensus 159 ~ 159 (259)
T 1oaa_A 159 A 159 (259)
T ss_dssp G
T ss_pred h
Confidence 4
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.58 E-value=1.6e-15 Score=124.05 Aligned_cols=122 Identities=17% Similarity=0.059 Sum_probs=88.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----C---CCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----F---PTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----~---~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
.+|++|||||+|+||++++++|+ ++|++|++++|++.... . ....+. ++.+|++|++++.++++.+
T Consensus 32 ~gk~~lVTGas~GIG~aia~~la-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~Dv~d~~~v~~~~~~~ 105 (281)
T 4dry_A 32 EGRIALVTGGGTGVGRGIAQALS-----AEGYSVVITGRRPDVLDAAAGEIGGRTGNIVR-AVVCDVGDPDQVAALFAAV 105 (281)
T ss_dssp --CEEEETTTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHHHHHSSCEE-EEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHHHhcCCCeEE-EEEcCCCCHHHHHHHHHHH
Confidence 46899999999999999999999 68999999999865311 0 012247 8999999999888887665
Q ss_pred cc---ccceEEeecccCC----------chhHHHHhhcHHHHHHHHHHHHhcCCC-CCCceEEEEeecCe
Q 028258 80 SQ---EITNLFWVPLQVQ----------ESEEVNIFKNSTMLKNVLSVLVSSNSG-RSRLRHVALLTGTK 135 (211)
Q Consensus 80 ~~---~~~~v~~~a~~~~----------~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~~~~~~~s~~~ 135 (211)
.. .+|++||+|+... .++...+++|+.++.++++++...+.. ...-.+|+++||..
T Consensus 106 ~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~ 175 (281)
T 4dry_A 106 RAEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSIS 175 (281)
T ss_dssp HHHHSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGG
T ss_pred HHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHH
Confidence 21 3899999998632 135567899999988877776554210 11135788888753
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A | Back alignment and structure |
|---|
Probab=99.58 E-value=1.5e-14 Score=116.37 Aligned_cols=123 Identities=8% Similarity=-0.032 Sum_probs=91.0
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----C---CCCCceeEEEeeC--CCHHHHHHHH
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----F---PTALVDRYITFDA--LDPTDTALKL 76 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----~---~~~~~~~~i~~Dl--~d~~~~~~~~ 76 (211)
..+|++|||||+|+||++++++|+ ++|++|++++|++.... . ....+. ++.+|+ +|++++.+.+
T Consensus 10 l~~k~vlVTGas~gIG~aia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~ 83 (252)
T 3f1l_A 10 LNDRIILVTGASDGIGREAAMTYA-----RYGATVILLGRNEEKLRQVASHINEETGRQPQ-WFILDLLTCTSENCQQLA 83 (252)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHHHHHSCCCE-EEECCTTTCCHHHHHHHH
T ss_pred cCCCEEEEeCCCChHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhhcCCCce-EEEEecccCCHHHHHHHH
Confidence 357899999999999999999999 68999999999865311 0 113678 899999 8998887777
Q ss_pred Hhccc---ccceEEeecccCC----------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCee
Q 028258 77 SLISQ---EITNLFWVPLQVQ----------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKH 136 (211)
Q Consensus 77 ~~~~~---~~~~v~~~a~~~~----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~ 136 (211)
+.+.. .+|++||+|+... .++...+++|+.++.++++++...+... +..+|+++||...
T Consensus 84 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~-~~g~iv~isS~~~ 155 (252)
T 3f1l_A 84 QRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKS-DAGSLVFTSSSVG 155 (252)
T ss_dssp HHHHHHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTS-SSCEEEEECCGGG
T ss_pred HHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHC-CCCEEEEECChhh
Confidence 65421 3899999998631 1345678999999999888875432111 3467888887543
|
| >2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=7.4e-15 Score=128.87 Aligned_cols=156 Identities=15% Similarity=0.081 Sum_probs=109.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcE-EEEEeCCCCCCC----------CCCCCceeEEEeeCCCHHHHHHHH
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWK-VYGAARRPPPGW----------FPTALVDRYITFDALDPTDTALKL 76 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~-V~~~~R~~~~~~----------~~~~~~~~~i~~Dl~d~~~~~~~~ 76 (211)
.++++|||||+|+||++++++|+ ++|++ |++++|+..... ....+++ ++.+|++|++++.+.+
T Consensus 225 ~~~~vLITGgtGgIG~~la~~La-----~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~-~~~~Dv~d~~~v~~~~ 298 (486)
T 2fr1_A 225 PTGTVLVTGGTGGVGGQIARWLA-----RRGAPHLLLVSRSGPDADGAGELVAELEALGARTT-VAACDVTDRESVRELL 298 (486)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHH-----HHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEE-EEECCTTCHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-----HcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEE-EEEeCCCCHHHHHHHH
Confidence 35899999999999999999999 67885 999999764211 0134678 8999999999999999
Q ss_pred Hhccc--ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeee-ecccCCc
Q 028258 77 SLISQ--EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY-MGPIFDP 144 (211)
Q Consensus 77 ~~~~~--~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y-~~~~~~~ 144 (211)
+.+.. .+|.|||+|+.... .+...+++|+.++.++.+++... ++.+|+++||...+ +.+
T Consensus 299 ~~i~~~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~-----~~~~~V~~SS~a~~~g~~---- 369 (486)
T 2fr1_A 299 GGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTREL-----DLTAFVLFSSFASAFGAP---- 369 (486)
T ss_dssp HTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTS-----CCSEEEEEEEHHHHTCCT----
T ss_pred HHHHhcCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcC-----CCCEEEEEcChHhcCCCC----
Confidence 87621 37999999986432 23456688999999999998765 56888888885433 211
Q ss_pred cccCCCCCCCCCCcCCCCCCCCCCcchhH----HHHHhh-cCCCceEEEecCCceEecCC
Q 028258 145 SLAGQLMPYEVPFKEDSSRLPFPNFYYEL----EDVSAS-YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 145 ~~~g~~~~~~~~~~e~~~~~~~~~~~~~~----e~~l~~-~~~~~~~~i~Rp~~i~G~~~ 199 (211)
....|... +.+..+ +..|+++++++|+.+.+.+.
T Consensus 370 ---------------------g~~~Yaaaka~l~~la~~~~~~gi~v~~i~pG~~~~~gm 408 (486)
T 2fr1_A 370 ---------------------GLGGYAPGNAYLDGLAQQRRSDGLPATAVAWGTWAGSGM 408 (486)
T ss_dssp ---------------------TCTTTHHHHHHHHHHHHHHHHTTCCCEEEEECCBC----
T ss_pred ---------------------CCHHHHHHHHHHHHHHHHHHhcCCeEEEEECCeeCCCcc
Confidence 01122221 111111 34699999999999987643
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=1.3e-14 Score=118.55 Aligned_cols=121 Identities=12% Similarity=-0.066 Sum_probs=90.1
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC----CCCCCceeEEEeeCCCHHHHHHHHHhccc-
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW----FPTALVDRYITFDALDPTDTALKLSLISQ- 81 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~----~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~- 81 (211)
+++|++|||||+|+||++++++|+ ++|++|++++|+..... .....+. ++.+|++|++++.+.++.+..
T Consensus 3 l~gk~~lVTGas~GIG~aia~~la-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~v~~~~~~~~~~ 76 (281)
T 3zv4_A 3 LTGEVALITGGASGLGRALVDRFV-----AEGARVAVLDKSAERLRELEVAHGGNAV-GVVGDVRSLQDQKRAAERCLAA 76 (281)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHTBTTEE-EEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCcHHHHHHHHHHH-----HCcCEEEEEeCCHHHHHHHHHHcCCcEE-EEEcCCCCHHHHHHHHHHHHHh
Confidence 346899999999999999999999 68999999999765311 1135678 899999999988777765421
Q ss_pred --ccceEEeecccCCc--------------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 82 --EITNLFWVPLQVQE--------------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 82 --~~~~v~~~a~~~~~--------------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
.+|++||+|+.... .+...+++|+.++.++++++...+.. +-.+++++||..
T Consensus 77 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~--~~g~iv~isS~~ 144 (281)
T 3zv4_A 77 FGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVS--SRGSVVFTISNA 144 (281)
T ss_dssp HSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHH--HTCEEEEECCGG
T ss_pred cCCCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHh--cCCeEEEEecch
Confidence 38999999986321 24556789999999988887654200 114778877754
|
| >3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=1.3e-14 Score=116.61 Aligned_cols=120 Identities=10% Similarity=-0.052 Sum_probs=90.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC---CCCCCCceeEEEeeCCCHHHHHHHHHhccc---
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG---WFPTALVDRYITFDALDPTDTALKLSLISQ--- 81 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~---~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~--- 81 (211)
|+|+||||||++.||++++++|+ ++|++|++++|++... .....++. .+.+|++|++++.+.++.+..
T Consensus 1 MnK~vlVTGas~GIG~aia~~la-----~~Ga~V~~~~~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~v~~~v~~~~~~~g 74 (247)
T 3ged_A 1 MNRGVIVTGGGHGIGKQICLDFL-----EAGDKVCFIDIDEKRSADFAKERPNLF-YFHGDVADPLTLKKFVEYAMEKLQ 74 (247)
T ss_dssp -CCEEEEESTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHTTCTTEE-EEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEecCCCHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHhcCCEE-EEEecCCCHHHHHHHHHHHHHHcC
Confidence 56999999999999999999999 7999999999976531 11346778 899999999888777654421
Q ss_pred ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 82 EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 82 ~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
.+|++||+|+... .+|+..+++|+.++..+.+++...+... + .+++.+||..
T Consensus 75 ~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~-~-G~IInisS~~ 135 (247)
T 3ged_A 75 RIDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKN-K-GRIINIASTR 135 (247)
T ss_dssp CCCEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-T-CEEEEECCGG
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc-C-CcEEEEeecc
Confidence 3899999997633 2567788999999888877776543111 1 4677777643
|
| >1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A* | Back alignment and structure |
|---|
Probab=99.56 E-value=3.2e-16 Score=131.01 Aligned_cols=162 Identities=10% Similarity=0.036 Sum_probs=103.3
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCc-------EEEEEeCCCC--CC-----CCCCCCceeEEEeeCCCHHHHHH
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPW-------KVYGAARRPP--PG-----WFPTALVDRYITFDALDPTDTAL 74 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~-------~V~~~~R~~~--~~-----~~~~~~~~~~i~~Dl~d~~~~~~ 74 (211)
+++|+||||+||||++++..|+ .+|+ +|+++++.+. .. ...+..+. ++ .|+.+.+.+.+
T Consensus 4 ~mkVlVtGaaGfIG~~l~~~L~-----~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~-~~-~di~~~~~~~~ 76 (327)
T 1y7t_A 4 PVRVAVTGAAGQIGYSLLFRIA-----AGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFP-LL-AGLEATDDPKV 76 (327)
T ss_dssp CEEEEESSTTSHHHHHHHHHHH-----TTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCT-TE-EEEEEESCHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHH-----hCCCCCCCCCCEEEEEeCCCchhhccchhhhhhccccc-cc-CCeEeccChHH
Confidence 3579999999999999999999 5675 8999988641 00 01112234 44 67776656666
Q ss_pred HHHhcccccceEEeecccCC---chhHHHHhhcHHHHHHHHHHHHhcCCCC-CCceEEEEeecCeeeecccCCccccCCC
Q 028258 75 KLSLISQEITNLFWVPLQVQ---ESEEVNIFKNSTMLKNVLSVLVSSNSGR-SRLRHVALLTGTKHYMGPIFDPSLAGQL 150 (211)
Q Consensus 75 ~~~~~~~~~~~v~~~a~~~~---~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~~~~~~s~~~~y~~~~~~~~~~g~~ 150 (211)
++++ +|+|||+|+... .++.+.++.|+.++.++++++.+. + ++. ++++.|+...-.
T Consensus 77 a~~~----~D~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~---~~~~~-~vvv~snp~~~~------------ 136 (327)
T 1y7t_A 77 AFKD----ADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEV---AKKDV-KVLVVGNPANTN------------ 136 (327)
T ss_dssp HTTT----CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH---SCTTC-EEEECSSSHHHH------------
T ss_pred HhCC----CCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhh---cCCCe-EEEEeCCchhhh------------
Confidence 6765 689999998754 245678899999999999999987 3 322 455554422000
Q ss_pred CCCCCCCc-CCCCCCCCCCcc----hhHHHHHhh--cCCCceEEEecCCceEecCCCC
Q 028258 151 MPYEVPFK-EDSSRLPFPNFY----YELEDVSAS--YSPAITYSVHRSSVIIGASPRS 201 (211)
Q Consensus 151 ~~~~~~~~-e~~~~~~~~~~~----~~~e~~l~~--~~~~~~~~i~Rp~~i~G~~~~~ 201 (211)
.+.. |..+..++.+.| ...|++... +..+++.+++||++|||+....
T Consensus 137 ----~~~~~~~~~~~~p~~~yg~tkl~~er~~~~~a~~~g~~~~~vr~~~V~G~h~~~ 190 (327)
T 1y7t_A 137 ----ALIAYKNAPGLNPRNFTAMTRLDHNRAKAQLAKKTGTGVDRIRRMTVWGNHSST 190 (327)
T ss_dssp ----HHHHHHTCTTSCGGGEEECCHHHHHHHHHHHHHHHTCCGGGEECCEEEBCSSTT
T ss_pred ----HHHHHHHcCCCChhheeccchHHHHHHHHHHHHHhCcChhheeeeEEEcCCCCe
Confidence 0111 111111112223 223443332 3468999999999999987543
|
| >4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A* | Back alignment and structure |
|---|
Probab=99.56 E-value=5.6e-14 Score=113.88 Aligned_cols=117 Identities=16% Similarity=0.036 Sum_probs=87.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhccc---ccc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQ---EIT 84 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~---~~~ 84 (211)
.+|++|||||++.||++++++|+ ++|++|++++|+.... ..... .+.+|++|++++...++.+.. .+|
T Consensus 10 ~GK~alVTGas~GIG~aia~~la-----~~Ga~V~~~~r~~~~~---~~~~~-~~~~Dv~~~~~v~~~~~~~~~~~G~iD 80 (261)
T 4h15_A 10 RGKRALITAGTKGAGAATVSLFL-----ELGAQVLTTARARPEG---LPEEL-FVEADLTTKEGCAIVAEATRQRLGGVD 80 (261)
T ss_dssp TTCEEEESCCSSHHHHHHHHHHH-----HTTCEEEEEESSCCTT---SCTTT-EEECCTTSHHHHHHHHHHHHHHTSSCS
T ss_pred CCCEEEEeccCcHHHHHHHHHHH-----HcCCEEEEEECCchhC---CCcEE-EEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 47999999999999999999999 7999999999976542 23445 789999999988777655422 389
Q ss_pred eEEeecccCC-----------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 85 NLFWVPLQVQ-----------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 85 ~v~~~a~~~~-----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
++||+|+... .+|...+++|+.++..+.+++...+... +-.+++.+||.
T Consensus 81 ilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~-~~G~Iv~isS~ 140 (261)
T 4h15_A 81 VIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVAR-GSGVVVHVTSI 140 (261)
T ss_dssp EEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCG
T ss_pred EEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhc-CCceEEEEEeh
Confidence 9999987421 1456678999998877777665443101 23577877764
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.55 E-value=1.6e-14 Score=120.30 Aligned_cols=128 Identities=11% Similarity=-0.074 Sum_probs=91.7
Q ss_pred ccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCC----------CCCC-------CCCCCceeEEEeeC
Q 028258 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP----------PPGW-------FPTALVDRYITFDA 66 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~----------~~~~-------~~~~~~~~~i~~Dl 66 (211)
|....+|++|||||+|+||++++++|+ ++|++|++++|+. .... .....+. ++.+|+
T Consensus 22 m~~l~gk~vlVTGas~GIG~aia~~la-----~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dv 95 (322)
T 3qlj_A 22 MGVVDGRVVIVTGAGGGIGRAHALAFA-----AEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAV-ADGSNV 95 (322)
T ss_dssp CCTTTTCEEEETTTTSHHHHHHHHHHH-----HTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEE-EECCCT
T ss_pred hcccCCCEEEEECCCcHHHHHHHHHHH-----HCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEE-EEECCC
Confidence 334457899999999999999999999 6899999998862 1100 0124567 889999
Q ss_pred CCHHHHHHHHHhccc---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCC-----CCCCceEEE
Q 028258 67 LDPTDTALKLSLISQ---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNS-----GRSRLRHVA 129 (211)
Q Consensus 67 ~d~~~~~~~~~~~~~---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~-----~~~~~~~~~ 129 (211)
+|++++.+.++.+.. .+|++||+|+... .++...+++|+.++.++++++...+. +...-.+|+
T Consensus 96 ~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV 175 (322)
T 3qlj_A 96 ADWDQAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRII 175 (322)
T ss_dssp TSHHHHHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEE
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEE
Confidence 999988877765421 3899999998643 14556789999999888887764420 000014888
Q ss_pred EeecCeee
Q 028258 130 LLTGTKHY 137 (211)
Q Consensus 130 ~~s~~~~y 137 (211)
++||...+
T Consensus 176 ~isS~~~~ 183 (322)
T 3qlj_A 176 NTSSGAGL 183 (322)
T ss_dssp EECCHHHH
T ss_pred EEcCHHHc
Confidence 88875443
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.54 E-value=2.2e-15 Score=120.47 Aligned_cols=157 Identities=15% Similarity=0.110 Sum_probs=93.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC--CCCCCceeEEEeeCCCHHHH---HHHHHhcccc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW--FPTALVDRYITFDALDPTDT---ALKLSLISQE 82 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~--~~~~~~~~~i~~Dl~d~~~~---~~~~~~~~~~ 82 (211)
++|++|||||+|+||++++++|+ + |+.|++++|++.... ....+++ ++.+|+++.+.. .+.++....
T Consensus 4 ~~k~vlITGas~gIG~~~a~~l~-----~-g~~v~~~~r~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~- 75 (245)
T 3e9n_A 4 KKKIAVVTGATGGMGIEIVKDLS-----R-DHIVYALGRNPEHLAALAEIEGVE-PIESDIVKEVLEEGGVDKLKNLDH- 75 (245)
T ss_dssp --CEEEEESTTSHHHHHHHHHHT-----T-TSEEEEEESCHHHHHHHHTSTTEE-EEECCHHHHHHTSSSCGGGTTCSC-
T ss_pred CCCEEEEEcCCCHHHHHHHHHHh-----C-CCeEEEEeCCHHHHHHHHhhcCCc-ceecccchHHHHHHHHHHHHhcCC-
Confidence 46899999999999999999998 5 889999999765311 1135678 999999887542 222333323
Q ss_pred cceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCC
Q 028258 83 ITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPY 153 (211)
Q Consensus 83 ~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~ 153 (211)
+|++||+|+.... ++...+++|+.++.++++++...+... + .+++++||...+...
T Consensus 76 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~-g~iv~isS~~~~~~~------------- 140 (245)
T 3e9n_A 76 VDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAA-S-GCVIYINSGAGNGPH------------- 140 (245)
T ss_dssp CSEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-T-CEEEEEC---------------------
T ss_pred CCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc-C-CeEEEEcCcccccCC-------------
Confidence 8999999987431 345567899999777777765431001 1 578888876544310
Q ss_pred CCCCcCCCCCCCCCCcchhHHH-----HHhh-----cCCCceEEEecCCceEecCC
Q 028258 154 EVPFKEDSSRLPFPNFYYELED-----VSAS-----YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 154 ~~~~~e~~~~~~~~~~~~~~e~-----~l~~-----~~~~~~~~i~Rp~~i~G~~~ 199 (211)
+....|...| +... ...++.+..++|+.+.++-.
T Consensus 141 ------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~ 184 (245)
T 3e9n_A 141 ------------PGNTIYAASKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPML 184 (245)
T ss_dssp --------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-----
T ss_pred ------------CCchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCccCchh
Confidence 0112232222 2211 34689999999999988743
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A | Back alignment and structure |
|---|
Probab=99.53 E-value=3e-14 Score=115.10 Aligned_cols=122 Identities=7% Similarity=-0.090 Sum_probs=90.5
Q ss_pred CCCCeEEEEcCC--ChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC-C--------CCCCCceeEEEeeCCCHHHHHHH
Q 028258 7 NPKSVALIIGVT--GISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-W--------FPTALVDRYITFDALDPTDTALK 75 (211)
Q Consensus 7 ~~~~~ilVtGat--G~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~-~--------~~~~~~~~~i~~Dl~d~~~~~~~ 75 (211)
..+|++|||||+ |+||++++++|+ +.|++|++++|+.... . ....++. ++.+|++|++++.++
T Consensus 18 l~~k~vlITGas~~~giG~~~a~~l~-----~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~Dl~~~~~v~~~ 91 (267)
T 3gdg_A 18 LKGKVVVVTGASGPKGMGIEAARGCA-----EMGAAVAITYASRAQGAEENVKELEKTYGIKAK-AYKCQVDSYESCEKL 91 (267)
T ss_dssp CTTCEEEETTCCSSSSHHHHHHHHHH-----HTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEE-CCBCCTTCHHHHHHH
T ss_pred cCCCEEEEECCCCCCChHHHHHHHHH-----HCCCeEEEEeCCcchhHHHHHHHHHHhcCCcee-EEecCCCCHHHHHHH
Confidence 357899999999 999999999999 6899999998876532 0 0135678 889999999988887
Q ss_pred HHhccc---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 76 LSLISQ---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 76 ~~~~~~---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
++.+.. .+|++||+|+... .++...+++|+.++.++++++...+... +..+|+++||..
T Consensus 92 ~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~g~iv~isS~~ 162 (267)
T 3gdg_A 92 VKDVVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKER-GTGSLVITASMS 162 (267)
T ss_dssp HHHHHHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEECCGG
T ss_pred HHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHc-CCceEEEEcccc
Confidence 766521 3899999998642 1355678999999988888774321000 235778887754
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.53 E-value=1.2e-14 Score=117.35 Aligned_cols=129 Identities=16% Similarity=-0.007 Sum_probs=93.7
Q ss_pred CccccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHH
Q 028258 1 MEKQDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTA 73 (211)
Q Consensus 1 ~~~~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~ 73 (211)
|..|-.-.+|++|||||++.||+++++.|+ ++|++|++.+|+++... ....++. .+.+|++|+++++
T Consensus 1 Ms~~f~L~gKvalVTGas~GIG~aia~~la-----~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~-~~~~Dv~~~~~v~ 74 (255)
T 4g81_D 1 MTALFDLTGKTALVTGSARGLGFAYAEGLA-----AAGARVILNDIRATLLAESVDTLTRKGYDAH-GVAFDVTDELAIE 74 (255)
T ss_dssp --CTTCCTTCEEEETTCSSHHHHHHHHHHH-----HTTCEEEECCSCHHHHHHHHHHHHHTTCCEE-ECCCCTTCHHHHH
T ss_pred CCCCcCCCCCEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHHHhcCCcEE-EEEeeCCCHHHHH
Confidence 444433468999999999999999999999 79999999999765311 1235677 8899999999887
Q ss_pred HHHHhccc---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 74 LKLSLISQ---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 74 ~~~~~~~~---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
+.++.+.. .+|+++|+|+... .+|+..+++|+.++..+.+++...+....+-.+++.+||..
T Consensus 75 ~~~~~~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~ 148 (255)
T 4g81_D 75 AAFSKLDAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLT 148 (255)
T ss_dssp HHHHHHHHTTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGG
T ss_pred HHHHHHHHHCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehh
Confidence 77765532 3899999998633 25677889999998888776654321011235788887743
|
| >3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* | Back alignment and structure |
|---|
Probab=99.52 E-value=9.4e-14 Score=121.96 Aligned_cols=157 Identities=16% Similarity=0.049 Sum_probs=112.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCc-EEEEEeCCCCCCC----------CCCCCceeEEEeeCCCHHHHHHHH
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRPPPGW----------FPTALVDRYITFDALDPTDTALKL 76 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~-~V~~~~R~~~~~~----------~~~~~~~~~i~~Dl~d~~~~~~~~ 76 (211)
|++++|||||+|+||++++++|+ ++|+ +|+++.|+..... .....+. ++.+|++|++++.+.+
T Consensus 238 ~~~~vLITGgsgGIG~alA~~La-----~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~-~~~~Dvtd~~~v~~~~ 311 (496)
T 3mje_A 238 VHGSVLVTGGTGGIGGRVARRLA-----EQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVT-IAACDAADREALAALL 311 (496)
T ss_dssp CCSEEEEETCSSHHHHHHHHHHH-----HTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEE-EEECCTTCHHHHHHHH
T ss_pred CCCEEEEECCCCchHHHHHHHHH-----HCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEE-EEEccCCCHHHHHHHH
Confidence 45899999999999999999999 6888 6888888643211 0134678 8999999999999999
Q ss_pred Hhccc--ccceEEeecccC-Cc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCc
Q 028258 77 SLISQ--EITNLFWVPLQV-QE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDP 144 (211)
Q Consensus 77 ~~~~~--~~~~v~~~a~~~-~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~ 144 (211)
+.+.. .+|.|||+|+.. .. .+...+++|+.++.++.+++... ...+|+++||...+.+.
T Consensus 312 ~~i~~~g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~-----~~~~iV~~SS~a~~~g~---- 382 (496)
T 3mje_A 312 AELPEDAPLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADL-----DLDAFVLFSSGAAVWGS---- 382 (496)
T ss_dssp HTCCTTSCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTS-----CCSEEEEEEEHHHHTTC----
T ss_pred HHHHHhCCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhcc-----CCCEEEEEeChHhcCCC----
Confidence 87642 389999999864 21 34567899999999999998876 46788888875432110
Q ss_pred cccCCCCCCCCCCcCCCCCCCCCCcchhHHHHHh----h-cCCCceEEEecCCceEecCC
Q 028258 145 SLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVSA----S-YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 145 ~~~g~~~~~~~~~~e~~~~~~~~~~~~~~e~~l~----~-~~~~~~~~i~Rp~~i~G~~~ 199 (211)
+....|...+..+. + +..|++++.+.|+.+.+.+.
T Consensus 383 --------------------~g~~~YaAaKa~ldala~~~~~~Gi~v~sV~pG~w~~~gm 422 (496)
T 3mje_A 383 --------------------GGQPGYAAANAYLDALAEHRRSLGLTASSVAWGTWGEVGM 422 (496)
T ss_dssp --------------------TTCHHHHHHHHHHHHHHHHHHHTTCCCEEEEECEESSSCC
T ss_pred --------------------CCcHHHHHHHHHHHHHHHHHHhcCCeEEEEECCcccCCcc
Confidence 01112322222221 1 45799999999998876543
|
| >2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=99.52 E-value=6.9e-14 Score=123.38 Aligned_cols=150 Identities=14% Similarity=0.060 Sum_probs=107.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCc-EEEEEeCCCCCCC----------CCCCCceeEEEeeCCCHHHHHHHH
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRPPPGW----------FPTALVDRYITFDALDPTDTALKL 76 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~-~V~~~~R~~~~~~----------~~~~~~~~~i~~Dl~d~~~~~~~~ 76 (211)
.++++|||||+|+||++++++|+ +.|+ +|++++|+..... ....+++ ++.+|++|++++.+.+
T Consensus 258 ~~~~vLITGgtGgIG~~lA~~La-----~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~-~~~~Dvtd~~~v~~~~ 331 (511)
T 2z5l_A 258 PSGTVLITGGMGAIGRRLARRLA-----AEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVV-HAACDVAERDALAALV 331 (511)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHH-----HTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEE-EEECCSSCHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-----hCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEE-EEEeCCCCHHHHHHHH
Confidence 36899999999999999999999 6888 5888999763210 1134578 8999999999999998
Q ss_pred HhcccccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCee-eecccCCccc
Q 028258 77 SLISQEITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKH-YMGPIFDPSL 146 (211)
Q Consensus 77 ~~~~~~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~-y~~~~~~~~~ 146 (211)
+.. .+|.|||+|+.... .+...+++|+.++.++.+++... .++.+|+++||... |+.+
T Consensus 332 ~~~--~ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~----~~~~~~V~~SS~a~~~g~~------ 399 (511)
T 2z5l_A 332 TAY--PPNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADI----KGLDAFVLFSSVTGTWGNA------ 399 (511)
T ss_dssp HHS--CCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSC----TTCCCEEEEEEGGGTTCCT------
T ss_pred hcC--CCcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhc----cCCCEEEEEeCHHhcCCCC------
Confidence 872 28999999986432 23456788999999999887643 14678888887532 2210
Q ss_pred cCCCCCCCCCCcCCCCCCCCCCcchhHHHH-----Hhh-cCCCceEEEecCCceE
Q 028258 147 AGQLMPYEVPFKEDSSRLPFPNFYYELEDV-----SAS-YSPAITYSVHRSSVII 195 (211)
Q Consensus 147 ~g~~~~~~~~~~e~~~~~~~~~~~~~~e~~-----l~~-~~~~~~~~i~Rp~~i~ 195 (211)
....|...|. ... +..|+++++++|+.+-
T Consensus 400 --------------------g~~~YaaaKa~ld~la~~~~~~gi~v~sv~pG~~~ 434 (511)
T 2z5l_A 400 --------------------GQGAYAAANAALDALAERRRAAGLPATSVAWGLWG 434 (511)
T ss_dssp --------------------TBHHHHHHHHHHHHHHHHHHTTTCCCEEEEECCBC
T ss_pred --------------------CCHHHHHHHHHHHHHHHHHHHcCCcEEEEECCccc
Confidence 1112332222 222 4679999999999884
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.51 E-value=6.7e-14 Score=114.02 Aligned_cols=118 Identities=18% Similarity=0.045 Sum_probs=91.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC----CCCCCceeEEEeeCCCHHHHHHHHHhccc--
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW----FPTALVDRYITFDALDPTDTALKLSLISQ-- 81 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~----~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~-- 81 (211)
.+|++|||||+++||++++++|+ ++|++|++++|+.+... ....++. .+.+|++|++++++.++.+..
T Consensus 28 ~gKvalVTGas~GIG~aiA~~la-----~~Ga~V~i~~r~~~~l~~~~~~~g~~~~-~~~~Dv~~~~~v~~~~~~~~~~~ 101 (273)
T 4fgs_A 28 NAKIAVITGATSGIGLAAAKRFV-----AEGARVFITGRRKDVLDAAIAEIGGGAV-GIQADSANLAELDRLYEKVKAEA 101 (273)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHCTTCE-EEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCcCCHHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHcCCCeE-EEEecCCCHHHHHHHHHHHHHHc
Confidence 46899999999999999999999 79999999999865321 0135667 889999999988877765532
Q ss_pred -ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 82 -EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 82 -~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
.+|++|++|+... .+|+..+++|+.++..+.+++...+. +-..++.+||.
T Consensus 102 G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~---~~G~IInisS~ 161 (273)
T 4fgs_A 102 GRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLA---RGSSVVLTGST 161 (273)
T ss_dssp SCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEE---EEEEEEEECCG
T ss_pred CCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHh---hCCeEEEEeeh
Confidence 3899999997632 25777889999999999988877642 22456666664
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* | Back alignment and structure |
|---|
Probab=99.49 E-value=1e-13 Score=111.52 Aligned_cols=157 Identities=11% Similarity=0.024 Sum_probs=98.8
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCC------CCCCceeEEEeeCCCHHHHH-HHHHhcccc
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF------PTALVDRYITFDALDPTDTA-LKLSLISQE 82 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~------~~~~~~~~i~~Dl~d~~~~~-~~~~~~~~~ 82 (211)
|++|||||+|+||++++++|+ ++|++|++++|++.+... ....+. .+ |..+.+.+. +..+....
T Consensus 2 k~vlVTGas~gIG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~-~~--d~~~v~~~~~~~~~~~g~- 72 (254)
T 1zmt_A 2 STAIVTNVKHFGGMGSALRLS-----EAGHTVACHDESFKQKDELEAFAETYPQLK-PM--SEQEPAELIEAVTSAYGQ- 72 (254)
T ss_dssp CEEEESSTTSTTHHHHHHHHH-----HTTCEEEECCGGGGSHHHHHHHHHHCTTSE-EC--CCCSHHHHHHHHHHHHSC-
T ss_pred eEEEEeCCCchHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHhcCCcEE-EE--CHHHHHHHHHHHHHHhCC-
Confidence 789999999999999999999 689999999997654210 012333 32 555444322 22222223
Q ss_pred cceEEeecccC-C---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCC
Q 028258 83 ITNLFWVPLQV-Q---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMP 152 (211)
Q Consensus 83 ~~~v~~~a~~~-~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~ 152 (211)
+|++||+|+.. . .++...+++|+.++.++++++...+... +..+|+++||...+..
T Consensus 73 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~------------- 138 (254)
T 1zmt_A 73 VDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKR-KSGHIIFITSATPFGP------------- 138 (254)
T ss_dssp CCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEECCSTTTSC-------------
T ss_pred CCEEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEECCcccccC-------------
Confidence 89999999865 2 1345678999999888888775432001 2368888887543311
Q ss_pred CCCCCcCCCCCCCCCCcchhHHH-----HHhh-----cCCCceEEEecCCceEecCCCC
Q 028258 153 YEVPFKEDSSRLPFPNFYYELED-----VSAS-----YSPAITYSVHRSSVIIGASPRS 201 (211)
Q Consensus 153 ~~~~~~e~~~~~~~~~~~~~~e~-----~l~~-----~~~~~~~~i~Rp~~i~G~~~~~ 201 (211)
. +....|...| +.+. ...++.+..++|+.++|+....
T Consensus 139 --------~----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~ 185 (254)
T 1zmt_A 139 --------W----KELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPY 185 (254)
T ss_dssp --------C----TTCHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCS
T ss_pred --------C----CCchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCccccccccc
Confidence 0 1111232222 1111 3468999999999998876543
|
| >4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A* | Back alignment and structure |
|---|
Probab=99.48 E-value=1.7e-13 Score=110.85 Aligned_cols=121 Identities=11% Similarity=0.040 Sum_probs=91.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC------CCCCCceeEEEeeCCCHHHHHHHHHhccc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW------FPTALVDRYITFDALDPTDTALKLSLISQ 81 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~ 81 (211)
.+|++|||||++.||++++++|+ ++|++|++++|+.+... ....++. ++.+|++|++++.+.++.+..
T Consensus 6 ~gKvalVTGas~GIG~aia~~la-----~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~v~~~v~~~~~ 79 (258)
T 4gkb_A 6 QDKVVIVTGGASGIGGAISMRLA-----EERAIPVVFARHAPDGAFLDALAQRQPRAT-YLPVELQDDAQCRDAVAQTIA 79 (258)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESSCCCHHHHHHHHHHCTTCE-EEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHH-----HcCCEEEEEECCcccHHHHHHHHhcCCCEE-EEEeecCCHHHHHHHHHHHHH
Confidence 57999999999999999999999 69999999999876421 1236778 999999999887776654321
Q ss_pred ---ccceEEeecccCC--------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCee
Q 028258 82 ---EITNLFWVPLQVQ--------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKH 136 (211)
Q Consensus 82 ---~~~~v~~~a~~~~--------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~ 136 (211)
.+|.++|+|+... .+|...+++|+.++..+.+++...+... -.+++.+||...
T Consensus 80 ~~G~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~--~G~IVnisS~~~ 143 (258)
T 4gkb_A 80 TFGRLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKAT--RGAIVNISSKTA 143 (258)
T ss_dssp HHSCCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEECCTHH
T ss_pred HhCCCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc--CCeEEEEeehhh
Confidence 3899999998632 2466778999998888877766543111 146888887543
|
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} | Back alignment and structure |
|---|
Probab=99.47 E-value=1.6e-13 Score=110.77 Aligned_cols=121 Identities=11% Similarity=-0.115 Sum_probs=90.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHhcc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSLIS 80 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~ 80 (211)
.+|++|||||++.||+++++.|+ ++|++|++++|+++... ....++. .+.+|++|++++++.++.+.
T Consensus 6 ~gKvalVTGas~GIG~aiA~~la-----~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~-~~~~Dvt~~~~v~~~~~~~~ 79 (254)
T 4fn4_A 6 KNKVVIVTGAGSGIGRAIAKKFA-----LNDSIVVAVELLEDRLNQIVQELRGMGKEVL-GVKADVSKKKDVEEFVRRTF 79 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHHHTTCCEE-EEECCTTSHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHH-----HcCCEEEEEECCHHHHHHHHHHHHhcCCcEE-EEEccCCCHHHHHHHHHHHH
Confidence 57999999999999999999999 79999999999865311 1235677 89999999998877766543
Q ss_pred c---ccceEEeecccCC----------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 81 Q---EITNLFWVPLQVQ----------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 81 ~---~~~~v~~~a~~~~----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
. .+|.++|+|+... .+|+..+++|+.++..+.+++.+.|... +-.+++.+||..
T Consensus 80 ~~~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~-~~G~IVnisS~~ 146 (254)
T 4fn4_A 80 ETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQ-GKGVIVNTASIA 146 (254)
T ss_dssp HHHSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGG
T ss_pred HHcCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEEechh
Confidence 2 3899999997421 1466778999998888777766543111 235788887743
|
| >4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A | Back alignment and structure |
|---|
Probab=99.46 E-value=1.3e-12 Score=105.39 Aligned_cols=122 Identities=11% Similarity=-0.014 Sum_probs=88.5
Q ss_pred ccCCCCCeEEEEcCCC--hHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC--------CCCCCCceeEEEeeCCCHHHHH
Q 028258 4 QDQNPKSVALIIGVTG--ISGLSLAEALKNPTTPGSPWKVYGAARRPPPG--------WFPTALVDRYITFDALDPTDTA 73 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG--~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~--------~~~~~~~~~~i~~Dl~d~~~~~ 73 (211)
|....+|++|||||+| .||++++++|+ ++|++|++++|++... .....++. .+.+|++|++++.
T Consensus 1 M~~l~gK~alVTGaa~~~GIG~aiA~~la-----~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~v~ 74 (256)
T 4fs3_A 1 MLNLENKTYVIMGIANKRSIAFGVAKVLD-----QLGAKLVFTYRKERSRKELEKLLEQLNQPEAH-LYQIDVQSDEEVI 74 (256)
T ss_dssp CCCCTTCEEEEECCCSTTCHHHHHHHHHH-----HTTCEEEEEESSGGGHHHHHHHHGGGTCSSCE-EEECCTTCHHHHH
T ss_pred CcCCCCCEEEEECCCCCchHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHHHhcCCCcEE-EEEccCCCHHHHH
Confidence 4555689999999987 89999999999 7999999999986531 11235678 8999999999887
Q ss_pred HHHHhccc---ccceEEeecccCCc-------------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 74 LKLSLISQ---EITNLFWVPLQVQE-------------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 74 ~~~~~~~~---~~~~v~~~a~~~~~-------------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
+.++.+.. .+|.++|+++.... ++...+++|..++..+...+...+ .+-.+|+.+||.
T Consensus 75 ~~~~~~~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~---~~~G~IVnisS~ 148 (256)
T 4fs3_A 75 NGFEQIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLM---PEGGSIVATTYL 148 (256)
T ss_dssp HHHHHHHHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTC---TTCEEEEEEECG
T ss_pred HHHHHHHHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHh---ccCCEEEEEecc
Confidence 77654422 38999999875321 223345778887777777666552 223578888774
|
| >3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} | Back alignment and structure |
|---|
Probab=99.45 E-value=4.6e-13 Score=118.48 Aligned_cols=156 Identities=13% Similarity=0.066 Sum_probs=107.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcE-EEEE-eCCCCC----------CC-C---------CCCCceeEEEee
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWK-VYGA-ARRPPP----------GW-F---------PTALVDRYITFD 65 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~-V~~~-~R~~~~----------~~-~---------~~~~~~~~i~~D 65 (211)
.++++|||||+|+||.+++++|+ ++|++ |+++ +|+... .. . ....+. ++.+|
T Consensus 250 ~~~~vLITGgsgGIG~~lA~~La-----~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~-~~~~D 323 (525)
T 3qp9_A 250 ADGTVLVTGAEEPAAAEAARRLA-----RDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATAT-VVTCD 323 (525)
T ss_dssp TTSEEEESSTTSHHHHHHHHHHH-----HHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEE-EEECC
T ss_pred CCCEEEEECCCCcHHHHHHHHHH-----HcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEE-EEECC
Confidence 46899999999999999999999 68887 5556 787432 00 0 124578 89999
Q ss_pred CCCHHHHHHHHHhcc--cccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 66 ALDPTDTALKLSLIS--QEITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 66 l~d~~~~~~~~~~~~--~~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
++|++++.++++.+. ..+|.|||+|+.... .+...+++|+.++.++.+++...+.......+|+++||.
T Consensus 324 vtd~~~v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~ 403 (525)
T 3qp9_A 324 LTDAEAAARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSV 403 (525)
T ss_dssp TTSHHHHHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEG
T ss_pred CCCHHHHHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCH
Confidence 999999999998763 138999999986431 345678999999999999998762111015788888875
Q ss_pred eeeecccCCccccCCCCCCCCCCcCCCCCCCCCCcchhHHHH-Hhh-----cCCCceEEEecCCce
Q 028258 135 KHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDV-SAS-----YSPAITYSVHRSSVI 194 (211)
Q Consensus 135 ~~y~~~~~~~~~~g~~~~~~~~~~e~~~~~~~~~~~~~~e~~-l~~-----~~~~~~~~i~Rp~~i 194 (211)
..+.+. +. ...|...|. +.. +..|++++.+.|+.+
T Consensus 404 a~~~g~------------------------~g-~~~YaaaKa~l~~lA~~~~~~gi~v~sI~pG~~ 444 (525)
T 3qp9_A 404 AAIWGG------------------------AG-QGAYAAGTAFLDALAGQHRADGPTVTSVAWSPW 444 (525)
T ss_dssp GGTTCC------------------------TT-CHHHHHHHHHHHHHHTSCCSSCCEEEEEEECCB
T ss_pred HHcCCC------------------------CC-CHHHHHHHHHHHHHHHHHHhCCCCEEEEECCcc
Confidence 432110 01 122333322 221 457899999999988
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* | Back alignment and structure |
|---|
Probab=99.45 E-value=1.5e-12 Score=108.31 Aligned_cols=128 Identities=9% Similarity=-0.118 Sum_probs=84.4
Q ss_pred CccccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC---------CCCC----CCCCceeEEEeeCC
Q 028258 1 MEKQDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP---------PGWF----PTALVDRYITFDAL 67 (211)
Q Consensus 1 ~~~~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~---------~~~~----~~~~~~~~i~~Dl~ 67 (211)
|.....+.+|++|||||+|+||++++++|+ ++|++|++++|... +... ...... ...+|++
T Consensus 1 M~~~~~l~gk~~lVTGas~GIG~~~a~~La-----~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~-~~~~D~~ 74 (319)
T 1gz6_A 1 MASPLRFDGRVVLVTGAGGGLGRAYALAFA-----ERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGG-KAVANYD 74 (319)
T ss_dssp --CCCCCTTCEEEETTTTSHHHHHHHHHHH-----HTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTC-EEEEECC
T ss_pred CCCCCCCCCCEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCC-eEEEeCC
Confidence 444334457899999999999999999999 68999999866421 1000 001112 3458999
Q ss_pred CHHHHHHHHHhcc---cccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 68 DPTDTALKLSLIS---QEITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 68 d~~~~~~~~~~~~---~~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
|.+++.+.++.+. ..+|++||+|+.... ++...+++|+.++.++++++...+... +..+|+++||..
T Consensus 75 ~~~~~~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~grIV~vsS~~ 153 (319)
T 1gz6_A 75 SVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQ-NYGRIIMTASAS 153 (319)
T ss_dssp CGGGHHHHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TCEEEEEECCHH
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCCEEEEECChh
Confidence 9987666554321 138999999986321 355678999999888888774421001 346888888743
|
| >4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.44 E-value=1.2e-13 Score=110.76 Aligned_cols=127 Identities=17% Similarity=0.046 Sum_probs=92.0
Q ss_pred CccccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----CCCCCceeEEEeeCCCHHHHHHH
Q 028258 1 MEKQDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----FPTALVDRYITFDALDPTDTALK 75 (211)
Q Consensus 1 ~~~~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~ 75 (211)
|++.-.-.+|++|||||++.||+++++.|+ ++|++|++.+|+..... ....++. .+.+|++|++++...
T Consensus 1 M~n~f~L~GKvalVTGas~GIG~aiA~~la-----~~Ga~Vvi~~r~~~~~~~~~~~~~g~~~~-~~~~Dv~d~~~v~~~ 74 (247)
T 4hp8_A 1 MKNPFSLEGRKALVTGANTGLGQAIAVGLA-----AAGAEVVCAARRAPDETLDIIAKDGGNAS-ALLIDFADPLAAKDS 74 (247)
T ss_dssp --CTTCCTTCEEEETTTTSHHHHHHHHHHH-----HTTCEEEEEESSCCHHHHHHHHHTTCCEE-EEECCTTSTTTTTTS
T ss_pred CcCCcCCCCCEEEEeCcCCHHHHHHHHHHH-----HcCCEEEEEeCCcHHHHHHHHHHhCCcEE-EEEccCCCHHHHHHH
Confidence 444333468999999999999999999999 79999999999764210 1235677 899999999887766
Q ss_pred HHhcccccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 76 LSLISQEITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 76 ~~~~~~~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
++.- .+|+++|+|+... .+|+..+++|+.++..+.+++.+.+....+-.+++.+||..
T Consensus 75 ~~~g--~iDiLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~ 141 (247)
T 4hp8_A 75 FTDA--GFDILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLL 141 (247)
T ss_dssp STTT--CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGG
T ss_pred HHhC--CCCEEEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechh
Confidence 6543 2899999998633 25777889999998888876554321011235788887743
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A | Back alignment and structure |
|---|
Probab=99.43 E-value=3.2e-13 Score=117.52 Aligned_cols=159 Identities=14% Similarity=0.027 Sum_probs=110.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC----CCCCCceeEEEeeCCCHHHHHHHHHhccc--
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW----FPTALVDRYITFDALDPTDTALKLSLISQ-- 81 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~----~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~-- 81 (211)
.+|++|||||+|+||++++++|+ ++|++|++++|+..... ....+++ ++.+|++|++++.+.++.+..
T Consensus 212 ~gk~~LVTGgsgGIG~aiA~~La-----~~Ga~Vvl~~r~~~~~~l~~~~~~~~~~-~~~~Dvtd~~~v~~~~~~~~~~~ 285 (454)
T 3u0b_A 212 DGKVAVVTGAARGIGATIAEVFA-----RDGATVVAIDVDGAAEDLKRVADKVGGT-ALTLDVTADDAVDKITAHVTEHH 285 (454)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHH-----HTTCEEEEEECGGGHHHHHHHHHHHTCE-EEECCTTSTTHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCchHHHHHHHHHHH-----HCCCEEEEEeCCccHHHHHHHHHHcCCe-EEEEecCCHHHHHHHHHHHHHHc
Confidence 46899999999999999999999 68999999998643210 0123567 899999999988888765521
Q ss_pred --ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCC
Q 028258 82 --EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQL 150 (211)
Q Consensus 82 --~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~ 150 (211)
.+|.|||+|+.... .+...+++|+.++.++.+++...+. ..+..+|+++||...+.+.
T Consensus 286 g~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~-~~~~g~iV~iSS~a~~~g~---------- 354 (454)
T 3u0b_A 286 GGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGT-IGEGGRVIGLSSMAGIAGN---------- 354 (454)
T ss_dssp TTCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTS-SCTTCEEEEECCHHHHHCC----------
T ss_pred CCCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhh-hcCCCEEEEEeChHhCCCC----------
Confidence 28999999987431 3556789999999999998876521 1134688888875443210
Q ss_pred CCCCCCCcCCCCCCCCCCcchhHHHH--------Hhh--cCCCceEEEecCCceEecC
Q 028258 151 MPYEVPFKEDSSRLPFPNFYYELEDV--------SAS--YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 151 ~~~~~~~~e~~~~~~~~~~~~~~e~~--------l~~--~~~~~~~~i~Rp~~i~G~~ 198 (211)
+....|...|. +.. ...|+++..++|+.+..+-
T Consensus 355 ---------------~g~~~YaasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~ 397 (454)
T 3u0b_A 355 ---------------RGQTNYATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKM 397 (454)
T ss_dssp ---------------TTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC--
T ss_pred ---------------CCCHHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChh
Confidence 01112332222 111 3579999999999997653
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=99.36 E-value=1.2e-12 Score=104.59 Aligned_cols=119 Identities=13% Similarity=-0.001 Sum_probs=77.0
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEE-e--CCCCCCCC---CCCCceeEEEeeCCCHHHHHH-HHHhccc
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGA-A--RRPPPGWF---PTALVDRYITFDALDPTDTAL-KLSLISQ 81 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~-~--R~~~~~~~---~~~~~~~~i~~Dl~d~~~~~~-~~~~~~~ 81 (211)
+|++|||||+|+||++++++|+ ++|++|+++ + |++..... ...+.+ .. |..+.+.+.+ ..+...
T Consensus 1 ~k~vlVTGas~gIG~~ia~~l~-----~~G~~V~~~~~~~r~~~~~~~~~~~~~~~~-~~--~~~~v~~~~~~~~~~~g- 71 (244)
T 1zmo_A 1 MVIALVTHARHFAGPAAVEALT-----QDGYTVVCHDASFADAAERQRFESENPGTI-AL--AEQKPERLVDATLQHGE- 71 (244)
T ss_dssp -CEEEESSTTSTTHHHHHHHHH-----HTTCEEEECCGGGGSHHHHHHHHHHSTTEE-EC--CCCCGGGHHHHHGGGSS-
T ss_pred CCEEEEECCCChHHHHHHHHHH-----HCCCEEEEecCCcCCHHHHHHHHHHhCCCc-cc--CHHHHHHHHHHHHHHcC-
Confidence 3789999999999999999999 689999999 6 87543110 001223 22 4444333322 223232
Q ss_pred ccceEEeecccCCc------------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeee
Q 028258 82 EITNLFWVPLQVQE------------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 137 (211)
Q Consensus 82 ~~~~v~~~a~~~~~------------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y 137 (211)
.+|++||+|+.... ++...+++|+.++.++++++...+... +..+|+++||...+
T Consensus 72 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-~~g~iv~isS~~~~ 138 (244)
T 1zmo_A 72 AIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAA-GGASVIFITSSVGK 138 (244)
T ss_dssp CEEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEECCGGGT
T ss_pred CCCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEECChhhC
Confidence 38999999985321 345678999999988888776432101 34788888885443
|
| >2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* | Back alignment and structure |
|---|
Probab=99.23 E-value=1.1e-10 Score=96.72 Aligned_cols=119 Identities=13% Similarity=0.034 Sum_probs=77.9
Q ss_pred CCCeEEEEcC--CChHHHHHHHHhhCCCCCCCCcEEEEEeCCC-----------CCC----CCCCC----CceeEEEeeC
Q 028258 8 PKSVALIIGV--TGISGLSLAEALKNPTTPGSPWKVYGAARRP-----------PPG----WFPTA----LVDRYITFDA 66 (211)
Q Consensus 8 ~~~~ilVtGa--tG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~-----------~~~----~~~~~----~~~~~i~~Dl 66 (211)
.+|++||||| +|+||++++++|+ +.|++|++++|++ ... ..... .++ ++.+|+
T Consensus 8 ~gk~~lVTGa~~s~GIG~aia~~la-----~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~d~ 81 (315)
T 2o2s_A 8 RGQTAFVAGVADSHGYGWAIAKHLA-----SAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAG-VYPLDA 81 (315)
T ss_dssp TTCEEEEECCSSSSSHHHHHHHHHH-----TTTCEEEEEECHHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSC-EEECCT
T ss_pred CCCEEEEeCCCCCCChHHHHHHHHH-----HCCCEEEEEecccccchhhhhhhhhhhhhhhhhhccccccccc-cccccc
Confidence 4689999999 8999999999999 6899999998642 110 00011 134 544443
Q ss_pred ------------CC--------HHHHHHHHHhcc---cccceEEeecccCC-----------chhHHHHhhcHHHHHHHH
Q 028258 67 ------------LD--------PTDTALKLSLIS---QEITNLFWVPLQVQ-----------ESEEVNIFKNSTMLKNVL 112 (211)
Q Consensus 67 ------------~d--------~~~~~~~~~~~~---~~~~~v~~~a~~~~-----------~~~~~~~~~n~~~~~~l~ 112 (211)
+| ++++.+.++.+. ..+|++||+|+... .++...+++|+.++.+++
T Consensus 82 ~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~ 161 (315)
T 2o2s_A 82 AFDKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLL 161 (315)
T ss_dssp TCSSTTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred cccccchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHH
Confidence 32 334544444331 13899999997431 135567899999999999
Q ss_pred HHHHhcCCCCCCceEEEEeecCe
Q 028258 113 SVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
+++...+. .-.+|+++||..
T Consensus 162 ~~~~~~m~---~~g~Iv~isS~~ 181 (315)
T 2o2s_A 162 QHFGPIMN---EGGSAVTLSYLA 181 (315)
T ss_dssp HHHSTTEE---EEEEEEEEEEGG
T ss_pred HHHHHHHh---cCCEEEEEeccc
Confidence 98876521 115778887753
|
| >1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* | Back alignment and structure |
|---|
Probab=99.23 E-value=8.1e-11 Score=96.47 Aligned_cols=119 Identities=15% Similarity=0.033 Sum_probs=77.4
Q ss_pred CCCeEEEEcCC--ChHHHHHHHHhhCCCCCCCCcEEEEEeCCC-----------CCCC----CCCCC----ceeEEEeeC
Q 028258 8 PKSVALIIGVT--GISGLSLAEALKNPTTPGSPWKVYGAARRP-----------PPGW----FPTAL----VDRYITFDA 66 (211)
Q Consensus 8 ~~~~ilVtGat--G~iG~~l~~~L~~~~~~~~g~~V~~~~R~~-----------~~~~----~~~~~----~~~~i~~Dl 66 (211)
.+|++|||||+ |+||++++++|+ +.|++|++++|++ .+.. ..... .. .+.+|+
T Consensus 7 ~~k~~lVTGas~~~GIG~aia~~la-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 80 (297)
T 1d7o_A 7 RGKRAFIAGIADDNGYGWAVAKSLA-----AAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKK-VYPLDA 80 (297)
T ss_dssp TTCEEEEECCSSSSSHHHHHHHHHH-----HTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEE-EEEECT
T ss_pred CCCEEEEECCCCCCChHHHHHHHHH-----HCCCeEEEeeccccchhhhhhhhhhHhhhhhhhcccccccccc-ccccce
Confidence 46899999999 999999999999 6899999987531 1110 00111 23 444432
Q ss_pred --------C----C--------HHHHHHHHHhcc---cccceEEeecccCC-----------chhHHHHhhcHHHHHHHH
Q 028258 67 --------L----D--------PTDTALKLSLIS---QEITNLFWVPLQVQ-----------ESEEVNIFKNSTMLKNVL 112 (211)
Q Consensus 67 --------~----d--------~~~~~~~~~~~~---~~~~~v~~~a~~~~-----------~~~~~~~~~n~~~~~~l~ 112 (211)
. | ++++.+.++.+. ..+|++||+|+... .++...+++|+.++.+++
T Consensus 81 ~~~~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~ 160 (297)
T 1d7o_A 81 VFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLL 160 (297)
T ss_dssp TCCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred eccchhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHH
Confidence 2 2 334444444321 12899999997421 135567899999999999
Q ss_pred HHHHhcCCCCCCceEEEEeecCe
Q 028258 113 SVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
+++...+. .-.+|+++||..
T Consensus 161 ~~~~~~m~---~~g~iv~isS~~ 180 (297)
T 1d7o_A 161 SHFLPIMN---PGGASISLTYIA 180 (297)
T ss_dssp HHHGGGEE---EEEEEEEEECGG
T ss_pred HHHHHHhc---cCceEEEEeccc
Confidence 99877531 125788887754
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=99.20 E-value=2.9e-11 Score=108.83 Aligned_cols=123 Identities=9% Similarity=-0.097 Sum_probs=80.6
Q ss_pred CCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCC---------CCCCC----CCCCceeEEEeeCCCHHHH
Q 028258 6 QNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP---------PPGWF----PTALVDRYITFDALDPTDT 72 (211)
Q Consensus 6 ~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~---------~~~~~----~~~~~~~~i~~Dl~d~~~~ 72 (211)
...+|++|||||+|+||++++++|+ ++|++|++++|+. ..... ...... .+.+|++|.+++
T Consensus 16 ~l~gk~~lVTGas~GIG~aiA~~La-----~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~D~~d~~~~ 89 (613)
T 3oml_A 16 RYDGRVAVVTGAGAGLGREYALLFA-----ERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGG-EAVADYNSVIDG 89 (613)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHH-----HTTCEEEEC--------------CHHHHHHHHHHTTC-CEEECCCCGGGH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCC-eEEEEeCCHHHH
Confidence 3457899999999999999999999 6899999998732 11000 001112 345899999887
Q ss_pred HHHHHhccc---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 73 ALKLSLISQ---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 73 ~~~~~~~~~---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
.+.++.+.. .+|++||+|+... .++...+++|+.++.++++++...+... +..+|+++||..
T Consensus 90 ~~~~~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~-~~g~IV~isS~a 163 (613)
T 3oml_A 90 AKVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQ-NYGRIIMTSSNS 163 (613)
T ss_dssp HHHHC----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-TCEEEEEECCHH
T ss_pred HHHHHHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEECCHH
Confidence 777665421 3899999998642 1456678999999999888875433111 346888888754
|
| >3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... | Back alignment and structure |
|---|
Probab=99.18 E-value=8.5e-11 Score=97.96 Aligned_cols=118 Identities=19% Similarity=0.156 Sum_probs=83.2
Q ss_pred CCeEEEEcCCC--hHHHHHHHHhhCCCCCCCCcEEEEEeCCC---------CCC-------CC---CCCCceeEEEeeCC
Q 028258 9 KSVALIIGVTG--ISGLSLAEALKNPTTPGSPWKVYGAARRP---------PPG-------WF---PTALVDRYITFDAL 67 (211)
Q Consensus 9 ~~~ilVtGatG--~iG~~l~~~L~~~~~~~~g~~V~~~~R~~---------~~~-------~~---~~~~~~~~i~~Dl~ 67 (211)
+|++|||||++ +||++++++|+ +.|++|++..|++ .+. .. ....+. ++.+|++
T Consensus 2 ~k~~lITGas~~~GIG~aiA~~la-----~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dv~ 75 (329)
T 3lt0_A 2 EDICFIAGIGDTNGYGWGIAKELS-----KRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILD-MLPFDAS 75 (329)
T ss_dssp CCEEEEECCSSSSSHHHHHHHHHH-----HTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEE-EEECCTT
T ss_pred CcEEEEECCCCCCchHHHHHHHHH-----HCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccc-ccccccc
Confidence 58999999875 99999999999 6999999776543 110 00 113356 8889998
Q ss_pred CH--H------------------HHHHHHHhccc---ccceEEeecccC----C-------chhHHHHhhcHHHHHHHHH
Q 028258 68 DP--T------------------DTALKLSLISQ---EITNLFWVPLQV----Q-------ESEEVNIFKNSTMLKNVLS 113 (211)
Q Consensus 68 d~--~------------------~~~~~~~~~~~---~~~~v~~~a~~~----~-------~~~~~~~~~n~~~~~~l~~ 113 (211)
+. + ++.++++.+.. .+|++||+|+.. . ..+...+++|+.++..+.+
T Consensus 76 ~~~~~~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~ 155 (329)
T 3lt0_A 76 FDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCK 155 (329)
T ss_dssp CSSGGGCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred ccchhhhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHH
Confidence 77 6 66666554421 389999999852 1 1355678999999999999
Q ss_pred HHHhcCCCCCCceEEEEeecCe
Q 028258 114 VLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
++...+. .-.+|+++||..
T Consensus 156 ~~~p~m~---~~g~Iv~isS~~ 174 (329)
T 3lt0_A 156 YFVNIMK---PQSSIISLTYHA 174 (329)
T ss_dssp HHGGGEE---EEEEEEEEECGG
T ss_pred HHHHHHh---hCCeEEEEeCcc
Confidence 8877631 114788887743
|
| >2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} | Back alignment and structure |
|---|
Probab=99.16 E-value=1.8e-10 Score=95.45 Aligned_cols=121 Identities=12% Similarity=0.032 Sum_probs=77.2
Q ss_pred CCCeEEEEcC--CChHHHHHHHHhhCCCCCCCCcEEEEEeCCC-----------CCCC----------------CCC-C-
Q 028258 8 PKSVALIIGV--TGISGLSLAEALKNPTTPGSPWKVYGAARRP-----------PPGW----------------FPT-A- 56 (211)
Q Consensus 8 ~~~~ilVtGa--tG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~-----------~~~~----------------~~~-~- 56 (211)
.+|++||||| +|+||++++++|+ ++|++|++++|++ .+.. ... .
T Consensus 8 ~~k~~lVTGa~~s~GIG~aia~~la-----~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (319)
T 2ptg_A 8 RGKTAFVAGVADSNGYGWAICKLLR-----AAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPV 82 (319)
T ss_dssp TTCEEEEECCCCTTSHHHHHHHHHH-----HTTCEEEEEECHHHHHHHHC------------------------------
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHH-----HCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhccc
Confidence 4689999999 8999999999999 6899999998642 1100 000 0
Q ss_pred ---CceeEEEeeC------------CC--------HHHHHHHHHhcc---cccceEEeecccC----C-------chhHH
Q 028258 57 ---LVDRYITFDA------------LD--------PTDTALKLSLIS---QEITNLFWVPLQV----Q-------ESEEV 99 (211)
Q Consensus 57 ---~~~~~i~~Dl------------~d--------~~~~~~~~~~~~---~~~~~v~~~a~~~----~-------~~~~~ 99 (211)
..+ ++.+|+ +| ++++.+.++.+. ..+|++||+|+.. . ..+..
T Consensus 83 ~~~~~~-~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~ 161 (319)
T 2ptg_A 83 DLVFDK-IYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLA 161 (319)
T ss_dssp --CCSE-EEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHH
T ss_pred cccccc-cccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHH
Confidence 024 555443 22 224444444321 1389999999742 1 13556
Q ss_pred HHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeee
Q 028258 100 NIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 137 (211)
Q Consensus 100 ~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y 137 (211)
.+++|+.++.++++++...+. .-.+|+++||...+
T Consensus 162 ~~~vN~~g~~~l~~~~~~~m~---~~g~Iv~isS~~~~ 196 (319)
T 2ptg_A 162 AVSSSSYSFVSLLQHFLPLMK---EGGSALALSYIASE 196 (319)
T ss_dssp HHHHHTHHHHHHHHHHGGGEE---EEEEEEEEEECC--
T ss_pred HHhHhhHHHHHHHHHHHHHHh---cCceEEEEeccccc
Confidence 789999999999998876531 12578888875443
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} | Back alignment and structure |
|---|
Probab=99.14 E-value=3.5e-10 Score=104.58 Aligned_cols=153 Identities=16% Similarity=0.107 Sum_probs=107.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCc-EEEEEeCCCCCCC----------CCCCCceeEEEeeCCCHHHHHHHH
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRPPPGW----------FPTALVDRYITFDALDPTDTALKL 76 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~-~V~~~~R~~~~~~----------~~~~~~~~~i~~Dl~d~~~~~~~~ 76 (211)
+.+++|||||+|.||++++++|++ +.|+ +|++++|+..... .....+. ++.||++|++++.+++
T Consensus 529 ~~~~~lItGg~~GlG~aiA~~la~----~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~-~~~~Dvsd~~~v~~~~ 603 (795)
T 3slk_A 529 AAGTVLVTGGTGALGAEVARHLVI----ERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVS-LQACDVADRETLAKVL 603 (795)
T ss_dssp TTSEEEEETTTSHHHHHHHHHHHH----TSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEE-EEECCTTCHHHHHHHH
T ss_pred cccceeeccCCCCcHHHHHHHHHH----HcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEE-EEEeecCCHHHHHHHH
Confidence 468999999999999999999982 3787 4888999843211 0134577 8999999999999999
Q ss_pred Hhccc--ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCcc
Q 028258 77 SLISQ--EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPS 145 (211)
Q Consensus 77 ~~~~~--~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~ 145 (211)
+.+.. .+|.+||+|+... .++...+++|+.++.++.+++.. .+ +|+.+||...+.+.
T Consensus 604 ~~~~~~~~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~------~l-~iV~~SS~ag~~g~----- 671 (795)
T 3slk_A 604 ASIPDEHPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDP------DV-ALVLFSSVSGVLGS----- 671 (795)
T ss_dssp HTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCT------TS-EEEEEEETHHHHTC-----
T ss_pred HHHHHhCCCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhh------CC-EEEEEccHHhcCCC-----
Confidence 87642 3899999998643 14566789999999999988743 34 78888875443210
Q ss_pred ccCCCCCCCCCCcCCCCCCCCCCcchhHHHHHhh------cCCCceEEEecCCceEec
Q 028258 146 LAGQLMPYEVPFKEDSSRLPFPNFYYELEDVSAS------YSPAITYSVHRSSVIIGA 197 (211)
Q Consensus 146 ~~g~~~~~~~~~~e~~~~~~~~~~~~~~e~~l~~------~~~~~~~~i~Rp~~i~G~ 197 (211)
+. ..-|...|.+.+ +..|+++..+-|+.+-..
T Consensus 672 -------------------~g-~~~YaAaka~~~alA~~~~~~Gi~v~sI~pG~v~t~ 709 (795)
T 3slk_A 672 -------------------GG-QGNYAAANSFLDALAQQRQSRGLPTRSLAWGPWAEH 709 (795)
T ss_dssp -------------------SS-CHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCCSCC
T ss_pred -------------------CC-CHHHHHHHHHHHHHHHHHHHcCCeEEEEECCeECcc
Confidence 01 112332222222 457999999999987543
|
| >3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} | Back alignment and structure |
|---|
Probab=99.08 E-value=1.3e-10 Score=81.69 Aligned_cols=94 Identities=17% Similarity=0.052 Sum_probs=70.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCC-cEEEEEeCCCCCCC-CCCCCceeEEEeeCCCHHHHHHHHHhcccccce
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSP-WKVYGAARRPPPGW-FPTALVDRYITFDALDPTDTALKLSLISQEITN 85 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g-~~V~~~~R~~~~~~-~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~ 85 (211)
|+++++|+|+ |++|+++++.|+ ..| ++|++++|++.+.. ....+++ ++.+|+.+.+.+.+.+++ +|.
T Consensus 4 ~~~~v~I~G~-G~iG~~~~~~l~-----~~g~~~v~~~~r~~~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~~----~d~ 72 (118)
T 3ic5_A 4 MRWNICVVGA-GKIGQMIAALLK-----TSSNYSVTVADHDLAALAVLNRMGVA-TKQVDAKDEAGLAKALGG----FDA 72 (118)
T ss_dssp TCEEEEEECC-SHHHHHHHHHHH-----HCSSEEEEEEESCHHHHHHHHTTTCE-EEECCTTCHHHHHHHTTT----CSE
T ss_pred CcCeEEEECC-CHHHHHHHHHHH-----hCCCceEEEEeCCHHHHHHHHhCCCc-EEEecCCCHHHHHHHHcC----CCE
Confidence 3478999999 999999999999 578 99999999865321 1135678 899999999888888764 688
Q ss_pred EEeecccCCchhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEE
Q 028258 86 LFWVPLQVQESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVAL 130 (211)
Q Consensus 86 v~~~a~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~ 130 (211)
||++++... ...+++.+.+. ++++|.+
T Consensus 73 vi~~~~~~~-------------~~~~~~~~~~~-----g~~~~~~ 99 (118)
T 3ic5_A 73 VISAAPFFL-------------TPIIAKAAKAA-----GAHYFDL 99 (118)
T ss_dssp EEECSCGGG-------------HHHHHHHHHHT-----TCEEECC
T ss_pred EEECCCchh-------------hHHHHHHHHHh-----CCCEEEe
Confidence 999884221 23567777765 5565543
|
| >3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A* | Back alignment and structure |
|---|
Probab=99.02 E-value=6.6e-09 Score=88.39 Aligned_cols=80 Identities=18% Similarity=0.119 Sum_probs=62.2
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCC-CCcEEEEEeCCCCCCC-------------------CCCCCceeEEEeeC
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPG-SPWKVYGAARRPPPGW-------------------FPTALVDRYITFDA 66 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~-~g~~V~~~~R~~~~~~-------------------~~~~~~~~~i~~Dl 66 (211)
+.+|++|||||++.||+++++.|+ + .|++|++++|+..... .....+. .+.+|+
T Consensus 45 ~~gKvaLVTGas~GIG~AiA~~LA-----~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~-~i~~Dv 118 (405)
T 3zu3_A 45 NGPKRVLVIGASTGYGLAARITAA-----FGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAK-SINGDA 118 (405)
T ss_dssp TCCSEEEEESCSSHHHHHHHHHHH-----HHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEE-EEESCT
T ss_pred CCCCEEEEeCcchHHHHHHHHHHH-----HhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceE-EEECCC
Confidence 447899999999999999999999 7 8999999988654321 0123456 789999
Q ss_pred CCHHHHHHHHHhccc---ccceEEeeccc
Q 028258 67 LDPTDTALKLSLISQ---EITNLFWVPLQ 92 (211)
Q Consensus 67 ~d~~~~~~~~~~~~~---~~~~v~~~a~~ 92 (211)
+|++++.+.++.+.. .+|++||+|+.
T Consensus 119 td~~~v~~~v~~i~~~~G~IDiLVNNAG~ 147 (405)
T 3zu3_A 119 FSDEIKQLTIDAIKQDLGQVDQVIYSLAS 147 (405)
T ss_dssp TSHHHHHHHHHHHHHHTSCEEEEEECCCC
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEEcCcc
Confidence 999888777665421 38999999875
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.99 E-value=7.7e-10 Score=106.09 Aligned_cols=120 Identities=11% Similarity=0.056 Sum_probs=84.7
Q ss_pred CCCeEEEEcCCCh-HHHHHHHHhhCCCCCCCCcEEEEEe-CCCCCCC-----C--C----CCCceeEEEeeCCCHHHHHH
Q 028258 8 PKSVALIIGVTGI-SGLSLAEALKNPTTPGSPWKVYGAA-RRPPPGW-----F--P----TALVDRYITFDALDPTDTAL 74 (211)
Q Consensus 8 ~~~~ilVtGatG~-iG~~l~~~L~~~~~~~~g~~V~~~~-R~~~~~~-----~--~----~~~~~~~i~~Dl~d~~~~~~ 74 (211)
++|++|||||+|+ ||++++++|+ +.|++|++++ |+..... . . ...+. ++.+|++|.+++.+
T Consensus 475 ~GKvALVTGASgGGIGrAIAr~LA-----~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~-vV~~DVTD~esVea 548 (1688)
T 2pff_A 475 KDKYVLITGAGKGSIGAEVLQGLL-----QGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLI-VVPFNQGSKQDVEA 548 (1688)
T ss_dssp CSCCEEECSCSSSSTHHHHHHHHH-----HHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEE-EEECCSSSTTHHHH
T ss_pred CCCEEEEECCChHHHHHHHHHHHH-----HCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEE-EEEeCCCCHHHHHH
Confidence 4689999999998 9999999999 6899999884 5443321 0 0 23567 88999999998888
Q ss_pred HHHhccc---------ccceEEeecccCCc------------hhHHHHhhcHHHHHHHHHHHH--hcCCCCCCceEEEEe
Q 028258 75 KLSLISQ---------EITNLFWVPLQVQE------------SEEVNIFKNSTMLKNVLSVLV--SSNSGRSRLRHVALL 131 (211)
Q Consensus 75 ~~~~~~~---------~~~~v~~~a~~~~~------------~~~~~~~~n~~~~~~l~~~~~--~~~~~~~~~~~~~~~ 131 (211)
+++.+.. .+|++||+|+.... .+...+++|+.++.++++++. ..+... +-.+|+++
T Consensus 549 LVe~I~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~kr-ggGrIVnI 627 (1688)
T 2pff_A 549 LIEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETR-PAQVILPM 627 (1688)
T ss_dssp HHHHHHSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTS-CEEECCCC
T ss_pred HHHHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhC-CCCEEEEE
Confidence 7765321 28999999985321 234567899999988888773 221101 12467777
Q ss_pred ecC
Q 028258 132 TGT 134 (211)
Q Consensus 132 s~~ 134 (211)
||.
T Consensus 628 SSi 630 (1688)
T 2pff_A 628 SPN 630 (1688)
T ss_dssp CSC
T ss_pred ECh
Confidence 763
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* | Back alignment and structure |
|---|
Probab=98.97 E-value=2.8e-09 Score=104.63 Aligned_cols=121 Identities=12% Similarity=0.046 Sum_probs=86.2
Q ss_pred CCCCeEEEEcCCCh-HHHHHHHHhhCCCCCCCCcEEEEEe-CCCCCCC-----------CCCCCceeEEEeeCCCHHHHH
Q 028258 7 NPKSVALIIGVTGI-SGLSLAEALKNPTTPGSPWKVYGAA-RRPPPGW-----------FPTALVDRYITFDALDPTDTA 73 (211)
Q Consensus 7 ~~~~~ilVtGatG~-iG~~l~~~L~~~~~~~~g~~V~~~~-R~~~~~~-----------~~~~~~~~~i~~Dl~d~~~~~ 73 (211)
+++|++|||||+|+ ||+++++.|+ +.|++|++++ |+..... .....+. ++.+|++|.+++.
T Consensus 673 l~gKvaLVTGASsGgIG~aIA~~La-----~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~-~v~~DVsd~~sV~ 746 (1887)
T 2uv8_A 673 FKDKYVLITGAGKGSIGAEVLQGLL-----QGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLI-VVPFNQGSKQDVE 746 (1887)
T ss_dssp CTTCEEEEESCCSSSHHHHHHHHHH-----HTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEE-EEECCTTCHHHHH
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHH-----HCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEE-EEEecCCCHHHHH
Confidence 34689999999999 9999999999 6899999885 5433210 0134577 8999999999888
Q ss_pred HHHHhccc---------ccceEEeecccCCc------------hhHHHHhhcHHHHHHHHHHHHhc--CCCCCCceEEEE
Q 028258 74 LKLSLISQ---------EITNLFWVPLQVQE------------SEEVNIFKNSTMLKNVLSVLVSS--NSGRSRLRHVAL 130 (211)
Q Consensus 74 ~~~~~~~~---------~~~~v~~~a~~~~~------------~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~~~~~~ 130 (211)
.+++.+.. .+|++||+|+.... .+...+++|+.++.++++++... +... +-.+|+.
T Consensus 747 alv~~i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~-~~G~IVn 825 (1887)
T 2uv8_A 747 ALIEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETR-PAQVILP 825 (1887)
T ss_dssp HHHHHHHSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSC-CEEEEEE
T ss_pred HHHHHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhC-CCCEEEE
Confidence 87764311 38999999986321 23456799999998888877322 1101 1257888
Q ss_pred eecC
Q 028258 131 LTGT 134 (211)
Q Consensus 131 ~s~~ 134 (211)
+||.
T Consensus 826 ISS~ 829 (1887)
T 2uv8_A 826 MSPN 829 (1887)
T ss_dssp ECSC
T ss_pred EcCh
Confidence 8774
|
| >3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV} | Back alignment and structure |
|---|
Probab=98.96 E-value=6.1e-09 Score=89.22 Aligned_cols=80 Identities=16% Similarity=0.088 Sum_probs=61.8
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCC-CCcEEEEEeCCCCCCCC-------------------CCCCceeEEEeeC
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPG-SPWKVYGAARRPPPGWF-------------------PTALVDRYITFDA 66 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~-~g~~V~~~~R~~~~~~~-------------------~~~~~~~~i~~Dl 66 (211)
..+|++|||||+++||+++++.|+ + .|++|++++|+...... ....+. .+.+|+
T Consensus 59 ~~gKvaLVTGASsGIG~AiA~~LA-----~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~-~i~~Dv 132 (422)
T 3s8m_A 59 DGPKKVLVIGASSGYGLASRITAA-----FGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSK-SINGDA 132 (422)
T ss_dssp SSCSEEEEESCSSHHHHHHHHHHH-----HHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEE-EEESCT
T ss_pred cCCCEEEEECCChHHHHHHHHHHH-----HhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEE-EEEecC
Confidence 357899999999999999999999 7 89999999987653210 123456 789999
Q ss_pred CCHHHHHHHHHhcc----cccceEEeeccc
Q 028258 67 LDPTDTALKLSLIS----QEITNLFWVPLQ 92 (211)
Q Consensus 67 ~d~~~~~~~~~~~~----~~~~~v~~~a~~ 92 (211)
+|++++.++++.+. ..+|.+||+|+.
T Consensus 133 td~~~v~~~v~~i~~~~~G~IDiLVNNAG~ 162 (422)
T 3s8m_A 133 FSDAARAQVIELIKTEMGGQVDLVVYSLAS 162 (422)
T ss_dssp TSHHHHHHHHHHHHHHSCSCEEEEEECCCC
T ss_pred CCHHHHHHHHHHHHHHcCCCCCEEEEcCcc
Confidence 99988776665431 138999999865
|
| >4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A* | Back alignment and structure |
|---|
Probab=98.95 E-value=1.5e-08 Score=86.95 Aligned_cols=79 Identities=15% Similarity=0.149 Sum_probs=62.0
Q ss_pred CCCeEEEEcCCChHHHH--HHHHhhCCCCCCCCcEEEEEeCCCCCCC-------------------CCCCCceeEEEeeC
Q 028258 8 PKSVALIIGVTGISGLS--LAEALKNPTTPGSPWKVYGAARRPPPGW-------------------FPTALVDRYITFDA 66 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~--l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------------------~~~~~~~~~i~~Dl 66 (211)
.+|++|||||++.||.+ +++.|. +.|++|++++|+..... .....+. .+.+|+
T Consensus 59 ~gK~aLVTGassGIG~A~aia~ala-----~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~Dv 132 (418)
T 4eue_A 59 GPKKVLIVGASSGFGLATRISVAFG-----GPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAK-NFIEDA 132 (418)
T ss_dssp CCSEEEEESCSSHHHHHHHHHHHHS-----SSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEE-EEESCT
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHH-----hCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEE-EEEeeC
Confidence 47899999999999999 999999 68999999998654321 0123567 889999
Q ss_pred CCHHHHHHHHHhccc---ccceEEeeccc
Q 028258 67 LDPTDTALKLSLISQ---EITNLFWVPLQ 92 (211)
Q Consensus 67 ~d~~~~~~~~~~~~~---~~~~v~~~a~~ 92 (211)
+|++++.++++.+.. .+|++||+|+.
T Consensus 133 td~~~v~~~v~~i~~~~G~IDiLVnNAG~ 161 (418)
T 4eue_A 133 FSNETKDKVIKYIKDEFGKIDLFVYSLAA 161 (418)
T ss_dssp TCHHHHHHHHHHHHHTTCCEEEEEECCCC
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEECCcc
Confidence 999988777765432 38999999875
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* | Back alignment and structure |
|---|
Probab=98.93 E-value=2.1e-09 Score=105.43 Aligned_cols=121 Identities=12% Similarity=0.032 Sum_probs=84.9
Q ss_pred CCCCeEEEEcCCCh-HHHHHHHHhhCCCCCCCCcEEEEEeCCCC-CC-----------CCCCCCceeEEEeeCCCHHHHH
Q 028258 7 NPKSVALIIGVTGI-SGLSLAEALKNPTTPGSPWKVYGAARRPP-PG-----------WFPTALVDRYITFDALDPTDTA 73 (211)
Q Consensus 7 ~~~~~ilVtGatG~-iG~~l~~~L~~~~~~~~g~~V~~~~R~~~-~~-----------~~~~~~~~~~i~~Dl~d~~~~~ 73 (211)
+++|++|||||+|+ ||++++++|+ +.|++|++++++.. .. ......+. ++.+|++|.+++.
T Consensus 650 L~gKvaLVTGASgGgIG~aIAr~LA-----~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~-~v~~DVsd~esV~ 723 (1878)
T 2uv9_A 650 FQGKHALMTGAGAGSIGAEVLQGLL-----SGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLV-VVPFNQGSKQDVE 723 (1878)
T ss_dssp CTTCEEEEESCCTTSHHHHHHHHHH-----HTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEE-EEECCTTCHHHHH
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHH-----HCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEE-EEEcCCCCHHHHH
Confidence 34689999999999 9999999999 68999998865432 11 00124577 8999999999988
Q ss_pred HHHHhccc-------ccceEEeecccCCc------------hhHHHHhhcHHHHHHHHHHHH--hcCCCCCCceEEEEee
Q 028258 74 LKLSLISQ-------EITNLFWVPLQVQE------------SEEVNIFKNSTMLKNVLSVLV--SSNSGRSRLRHVALLT 132 (211)
Q Consensus 74 ~~~~~~~~-------~~~~v~~~a~~~~~------------~~~~~~~~n~~~~~~l~~~~~--~~~~~~~~~~~~~~~s 132 (211)
..++.+.. .+|++||+|+.... .+...+++|+.++.+++.+++ ..+. ..+..+|+++|
T Consensus 724 alv~~i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~-~~~~G~IVnIS 802 (1878)
T 2uv9_A 724 ALVNYIYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYE-TRPAQVILPLS 802 (1878)
T ss_dssp HHHHHHHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC-SCCEEECCEEC
T ss_pred HHHHHHHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHH-hCCCCEEEEEc
Confidence 88765421 38999999986321 234567999999888876632 2211 01235777777
Q ss_pred cC
Q 028258 133 GT 134 (211)
Q Consensus 133 ~~ 134 (211)
|.
T Consensus 803 S~ 804 (1878)
T 2uv9_A 803 PN 804 (1878)
T ss_dssp SC
T ss_pred ch
Confidence 64
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=98.86 E-value=3.3e-09 Score=95.30 Aligned_cols=120 Identities=13% Similarity=-0.065 Sum_probs=81.8
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC---CC--CCCCceeEEEeeC-CCHHH-HHHHHHhc
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG---WF--PTALVDRYITFDA-LDPTD-TALKLSLI 79 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~---~~--~~~~~~~~i~~Dl-~d~~~-~~~~~~~~ 79 (211)
+++|+++||||+++||++++++|+ ++|++|++.+|+.... .. ....+. .+.+|+ .+.+. ++++.+..
T Consensus 320 l~gkvalVTGas~GIG~a~A~~la-----~~Ga~Vv~~~~~~~~~~~~~i~~~g~~~~-~~~~Dv~~~~~~~~~~~~~~~ 393 (604)
T 2et6_A 320 LKDKVVLITGAGAGLGKEYAKWFA-----KYGAKVVVNDFKDATKTVDEIKAAGGEAW-PDQHDVAKDSEAIIKNVIDKY 393 (604)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHH-----HTTCEEEEECSSCCHHHHHHHHHTTCEEE-EECCCHHHHHHHHHHHHHHHH
T ss_pred cCCCeEEEECcchHHHHHHHHHHH-----HCCCEEEEEeCccHHHHHHHHHhcCCeEE-EEEcChHHHHHHHHHHHHHhc
Confidence 346899999999999999999999 6999999988743210 00 123345 667788 55444 33334444
Q ss_pred ccccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 80 SQEITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 80 ~~~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
.. +|++||+|+... .+|+..+++|+.++.++.+++...+... +-.+|+.+||.
T Consensus 394 G~-iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~-~~G~IVnisS~ 455 (604)
T 2et6_A 394 GT-IDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEK-QFGRIINITST 455 (604)
T ss_dssp SC-CCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEECCH
T ss_pred CC-CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCCEEEEECCh
Confidence 33 899999998632 1466778999999888887776543101 23578888774
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=98.85 E-value=1.8e-09 Score=97.06 Aligned_cols=125 Identities=10% Similarity=-0.073 Sum_probs=80.2
Q ss_pred CccccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC---------CCC-----CCCCCceeEEEeeC
Q 028258 1 MEKQDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP---------PGW-----FPTALVDRYITFDA 66 (211)
Q Consensus 1 ~~~~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~---------~~~-----~~~~~~~~~i~~Dl 66 (211)
|.+|. +++|+++||||+++||++++++|+ ++|++|++.+|+.. ... ....+.+ ..+|+
T Consensus 1 m~~~~-l~gkvalVTGas~GIG~a~A~~la-----~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~--~~~d~ 72 (604)
T 2et6_A 1 MSPVD-FKDKVVIITGAGGGLGKYYSLEFA-----KLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGV--AVADY 72 (604)
T ss_dssp -CCCC-CTTCEEEETTTTSHHHHHHHHHHH-----HTTCEEEEECC-----------CHHHHHHHHHHHTTCE--EEEEC
T ss_pred CCCCC-CCCCEEEEeCCCcHHHHHHHHHHH-----HcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCe--EEEEc
Confidence 44443 346899999999999999999999 69999999887541 100 0001112 23577
Q ss_pred CCHHHHHHHH----HhcccccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeec
Q 028258 67 LDPTDTALKL----SLISQEITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTG 133 (211)
Q Consensus 67 ~d~~~~~~~~----~~~~~~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~ 133 (211)
.|.+++.+.+ +.... +|++||+|+... .+|+..+++|+.++.++.+++...+... +-.+|+.+||
T Consensus 73 ~d~~~~~~~v~~~~~~~G~-iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~-~~G~IVnisS 150 (604)
T 2et6_A 73 NNVLDGDKIVETAVKNFGT-VHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQ-KYGRIVNTSS 150 (604)
T ss_dssp CCTTCHHHHHHHHHHHHSC-CCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECC
T ss_pred CCHHHHHHHHHHHHHHcCC-CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCCEEEEECC
Confidence 7765443333 33333 899999998632 1466788999999888877765543101 2257888877
Q ss_pred Ce
Q 028258 134 TK 135 (211)
Q Consensus 134 ~~ 135 (211)
..
T Consensus 151 ~a 152 (604)
T 2et6_A 151 PA 152 (604)
T ss_dssp HH
T ss_pred HH
Confidence 43
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=98.84 E-value=7.9e-09 Score=105.16 Aligned_cols=119 Identities=15% Similarity=0.037 Sum_probs=86.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcE-EEEEeCCCCCCC----------CCCCCceeEEEeeCCCHHHHHHHH
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWK-VYGAARRPPPGW----------FPTALVDRYITFDALDPTDTALKL 76 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~-V~~~~R~~~~~~----------~~~~~~~~~i~~Dl~d~~~~~~~~ 76 (211)
..|++|||||+|.||+++++.|+ ++|++ |++++|+..+.. ....++. ++.+|++|.+++.+++
T Consensus 1883 ~~k~~lITGgs~GIG~aia~~la-----~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~-~~~~Dvsd~~~v~~~~ 1956 (2512)
T 2vz8_A 1883 PHKSYVITGGLGGFGLQLAQWLR-----LRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVL-VSTSNASSLDGARSLI 1956 (2512)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHH-----HTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEE-EECCCSSSHHHHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHHH-----HCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEE-EEecCCCCHHHHHHHH
Confidence 46899999999999999999999 68987 777888765321 0123567 7889999999888777
Q ss_pred Hhcc--cccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 77 SLIS--QEITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 77 ~~~~--~~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
+.+. ..+|.+||+|+... .++...+++|+.++.++.+++... .....+|+.+||..
T Consensus 1957 ~~~~~~g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~---~~~~g~iV~iSS~a 2023 (2512)
T 2vz8_A 1957 TEATQLGPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREA---CPELDYFVIFSSVS 2023 (2512)
T ss_dssp HHHHHHSCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHH---CTTCCEEEEECCHH
T ss_pred HHHHhcCCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHh---cccCCEEEEecchh
Confidence 6542 13899999998632 235556799999999998887765 23457888888743
|
| >1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A | Back alignment and structure |
|---|
Probab=98.68 E-value=1.1e-08 Score=85.31 Aligned_cols=110 Identities=7% Similarity=-0.060 Sum_probs=74.6
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCc-------EEEEEeCC----CCCCC-----CCCCCceeEEEeeCCCHHHH
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPW-------KVYGAARR----PPPGW-----FPTALVDRYITFDALDPTDT 72 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~-------~V~~~~R~----~~~~~-----~~~~~~~~~i~~Dl~d~~~~ 72 (211)
+++|+||||+|+||++++..|+ ..++ +|.++++. ..+.. +.+.... + ..|+...++.
T Consensus 5 ~~KI~ViGaaG~VG~~l~~~L~-----~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~-~-~~~i~~~~~~ 77 (329)
T 1b8p_A 5 PMRVAVTGAAGQICYSLLFRIA-----NGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFP-L-LAGMTAHADP 77 (329)
T ss_dssp CEEEEESSTTSHHHHHHHHHHH-----TTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCT-T-EEEEEEESSH
T ss_pred CCEEEEECCCChHHHHHHHHHH-----hCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhccc-c-cCcEEEecCc
Confidence 3579999999999999999998 4554 78888887 22110 0111112 2 1344444446
Q ss_pred HHHHHhcccccceEEeecccCCc---hhHHHHhhcHHHHHHHHHHHHhcCCCC-CCceEEEEeec
Q 028258 73 ALKLSLISQEITNLFWVPLQVQE---SEEVNIFKNSTMLKNVLSVLVSSNSGR-SRLRHVALLTG 133 (211)
Q Consensus 73 ~~~~~~~~~~~~~v~~~a~~~~~---~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~~~~~~s~ 133 (211)
.+++++ .|+|||+|+.... +..+....|+.+++++++.+.+. + +. .+|+++|.
T Consensus 78 ~~al~~----aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~---~~p~-a~ii~~SN 134 (329)
T 1b8p_A 78 MTAFKD----ADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAV---ASRN-IKVLVVGN 134 (329)
T ss_dssp HHHTTT----CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH---SCTT-CEEEECSS
T ss_pred HHHhCC----CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh---cCCC-eEEEEccC
Confidence 666776 5889999987542 34567789999999999999987 3 32 35666654
|
| >1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* | Back alignment and structure |
|---|
Probab=98.62 E-value=1.4e-08 Score=82.88 Aligned_cols=76 Identities=17% Similarity=0.089 Sum_probs=60.5
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----C-CCCCceeEEEeeCCCHHHHHHHHHhcc
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----F-PTALVDRYITFDALDPTDTALKLSLIS 80 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----~-~~~~~~~~i~~Dl~d~~~~~~~~~~~~ 80 (211)
.++|+++||||+|++|++++..|+ +.|++|++++|+..+.. . ...+++ ++.+|++|++++.+.++.
T Consensus 117 l~gk~vlVtGaaGGiG~aia~~L~-----~~G~~V~i~~R~~~~~~~l~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~-- 188 (287)
T 1lu9_A 117 VKGKKAVVLAGTGPVGMRSAALLA-----GEGAEVVLCGRKLDKAQAAADSVNKRFKVN-VTAAETADDASRAEAVKG-- 188 (287)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHH-----HTTCEEEEEESSHHHHHHHHHHHHHHHTCC-CEEEECCSHHHHHHHTTT--
T ss_pred CCCCEEEEECCCcHHHHHHHHHHH-----HCcCEEEEEECCHHHHHHHHHHHHhcCCcE-EEEecCCCHHHHHHHHHh--
Confidence 356899999999999999999999 68999999999754311 0 012467 889999999888877765
Q ss_pred cccceEEeeccc
Q 028258 81 QEITNLFWVPLQ 92 (211)
Q Consensus 81 ~~~~~v~~~a~~ 92 (211)
+|.|||+++.
T Consensus 189 --~DvlVn~ag~ 198 (287)
T 1lu9_A 189 --AHFVFTAGAI 198 (287)
T ss_dssp --CSEEEECCCT
T ss_pred --CCEEEECCCc
Confidence 6899999974
|
| >1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A | Back alignment and structure |
|---|
Probab=98.62 E-value=1e-07 Score=79.35 Aligned_cols=98 Identities=14% Similarity=0.041 Sum_probs=69.5
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCC--cEEEEEeCCCCCCC---CCC--CCceeEEEeeCCCHHHHHHHHHhccc
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSP--WKVYGAARRPPPGW---FPT--ALVDRYITFDALDPTDTALKLSLISQ 81 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g--~~V~~~~R~~~~~~---~~~--~~~~~~i~~Dl~d~~~~~~~~~~~~~ 81 (211)
+++|+||||+|++|+.++..|+ .+| ++|+++++++.... +.+ .... + .. +.+.+++.+++++
T Consensus 8 ~mKI~ViGAaG~VG~~la~~L~-----~~g~~~ev~l~Di~~~~~~~~dL~~~~~~~~-v-~~-~~~t~d~~~al~g--- 76 (326)
T 1smk_A 8 GFKVAILGAAGGIGQPLAMLMK-----MNPLVSVLHLYDVVNAPGVTADISHMDTGAV-V-RG-FLGQQQLEAALTG--- 76 (326)
T ss_dssp CEEEEEETTTSTTHHHHHHHHH-----HCTTEEEEEEEESSSHHHHHHHHHTSCSSCE-E-EE-EESHHHHHHHHTT---
T ss_pred CCEEEEECCCChHHHHHHHHHH-----hCCCCCEEEEEeCCCcHhHHHHhhcccccce-E-EE-EeCCCCHHHHcCC---
Confidence 4579999999999999999998 467 78999987654100 001 1112 1 22 3344566777776
Q ss_pred ccceEEeecccCCc---hhHHHHhhcHHHHHHHHHHHHhc
Q 028258 82 EITNLFWVPLQVQE---SEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 82 ~~~~v~~~a~~~~~---~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
.|+|||+++.... ...+....|+.+++++++.+.+.
T Consensus 77 -aDvVi~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~ 115 (326)
T 1smk_A 77 -MDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKC 115 (326)
T ss_dssp -CSEEEECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred -CCEEEEcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhh
Confidence 5889999986542 33566789999999999999987
|
| >1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A | Back alignment and structure |
|---|
Probab=98.58 E-value=3.7e-07 Score=79.18 Aligned_cols=99 Identities=15% Similarity=0.075 Sum_probs=69.5
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC---CCCCCCceeEEEeeCCCHHHHHHHHHhcccccce
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG---WFPTALVDRYITFDALDPTDTALKLSLISQEITN 85 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~---~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~ 85 (211)
+++|+|+| +|++|+++++.|+ +.|++|++++|++.+. ....++++ .+.+|++|.+++.+++++ +|.
T Consensus 3 ~k~VlViG-aG~iG~~ia~~L~-----~~G~~V~v~~R~~~~a~~la~~~~~~~-~~~~Dv~d~~~l~~~l~~----~Dv 71 (450)
T 1ff9_A 3 TKSVLMLG-SGFVTRPTLDVLT-----DSGIKVTVACRTLESAKKLSAGVQHST-PISLDVNDDAALDAEVAK----HDL 71 (450)
T ss_dssp CCEEEEEC-CSTTHHHHHHHHH-----TTTCEEEEEESSHHHHHHTTTTCTTEE-EEECCTTCHHHHHHHHTT----SSE
T ss_pred CCEEEEEC-CCHHHHHHHHHHH-----hCcCEEEEEECCHHHHHHHHHhcCCce-EEEeecCCHHHHHHHHcC----CcE
Confidence 47899998 8999999999999 6889999999976431 11123477 889999999888888764 789
Q ss_pred EEeecccCCch--hHHHHh--hc-------HHHHHHHHHHHHhc
Q 028258 86 LFWVPLQVQES--EEVNIF--KN-------STMLKNVLSVLVSS 118 (211)
Q Consensus 86 v~~~a~~~~~~--~~~~~~--~n-------~~~~~~l~~~~~~~ 118 (211)
|+|+++..... .....+ .| ...+.+++++++++
T Consensus 72 VIn~a~~~~~~~i~~a~l~~g~~vvd~~~~~~~~~~l~~aA~~a 115 (450)
T 1ff9_A 72 VISLIPYTFHATVIKSAIRQKKHVVTTSYVSPAMMELDQAAKDA 115 (450)
T ss_dssp EEECCC--CHHHHHHHHHHHTCEEEESSCCCHHHHHTHHHHHHT
T ss_pred EEECCccccchHHHHHHHhCCCeEEEeecccHHHHHHHHHHHHC
Confidence 99998764321 111111 12 23567888888876
|
| >2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A* | Back alignment and structure |
|---|
Probab=98.56 E-value=1.4e-07 Score=68.24 Aligned_cols=75 Identities=12% Similarity=0.053 Sum_probs=53.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC-CCCCCCceeEEEeeCCCHHHHHHHHHhcccccceE
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-WFPTALVDRYITFDALDPTDTALKLSLISQEITNL 86 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~-~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v 86 (211)
++++++|+|+ |.+|+.+++.|. +.|++|++++|++... .....+.. ++.+|.++++.+.++ .... +|.|
T Consensus 5 ~~~~v~I~G~-G~iG~~~a~~l~-----~~g~~v~~~d~~~~~~~~~~~~~~~-~~~~d~~~~~~l~~~--~~~~-~d~v 74 (144)
T 2hmt_A 5 KNKQFAVIGL-GRFGGSIVKELH-----RMGHEVLAVDINEEKVNAYASYATH-AVIANATEENELLSL--GIRN-FEYV 74 (144)
T ss_dssp -CCSEEEECC-SHHHHHHHHHHH-----HTTCCCEEEESCHHHHHTTTTTCSE-EEECCTTCHHHHHTT--TGGG-CSEE
T ss_pred cCCcEEEECC-CHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHhCCE-EEEeCCCCHHHHHhc--CCCC-CCEE
Confidence 3467999997 999999999999 6889999999876431 11223556 788999987765543 1222 6888
Q ss_pred Eeeccc
Q 028258 87 FWVPLQ 92 (211)
Q Consensus 87 ~~~a~~ 92 (211)
++++..
T Consensus 75 i~~~~~ 80 (144)
T 2hmt_A 75 IVAIGA 80 (144)
T ss_dssp EECCCS
T ss_pred EECCCC
Confidence 877753
|
| >3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* | Back alignment and structure |
|---|
Probab=98.53 E-value=1.9e-07 Score=95.73 Aligned_cols=106 Identities=10% Similarity=-0.042 Sum_probs=77.8
Q ss_pred CCCCeEEEEcCCCh-HHHHHHHHhhCCCCCCCCcEEEEEeCCCCC-----CC-------CCCCCceeEEEeeCCCHHHHH
Q 028258 7 NPKSVALIIGVTGI-SGLSLAEALKNPTTPGSPWKVYGAARRPPP-----GW-------FPTALVDRYITFDALDPTDTA 73 (211)
Q Consensus 7 ~~~~~ilVtGatG~-iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~-----~~-------~~~~~~~~~i~~Dl~d~~~~~ 73 (211)
..+|++|||||+++ ||+++++.|+ +.|++|++++|+... .. .....+. .+.+|++|++++.
T Consensus 2134 l~gKvaLVTGAs~GsIG~AiA~~La-----~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~-~v~~Dvtd~~~v~ 2207 (3089)
T 3zen_D 2134 XXDEVAVVTGASKGSIAASVVGQLL-----DGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLW-VVPANMASYSDID 2207 (3089)
T ss_dssp CCCCEEEEESCCTTSHHHHHHHHHH-----HTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEE-EEECCTTCHHHHH
T ss_pred CCCCEEEEeCCChhHHHHHHHHHHH-----HCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEE-EEEecCCCHHHHH
Confidence 45799999999999 9999999999 799999999997654 10 0123466 7899999999988
Q ss_pred HHHHhccc-------ccceEEeeccc----C----------CchhHH----HHhhcHHHHHHHHHHHHhc
Q 028258 74 LKLSLISQ-------EITNLFWVPLQ----V----------QESEEV----NIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 74 ~~~~~~~~-------~~~~v~~~a~~----~----------~~~~~~----~~~~n~~~~~~l~~~~~~~ 118 (211)
.+++.+.. .+|++||+|+. . ..++.. .+++|+.++..++.++...
T Consensus 2208 ~lv~~i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~ 2277 (3089)
T 3zen_D 2208 KLVEWVGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKI 2277 (3089)
T ss_dssp HHHHHHTSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88765432 38899999986 0 012322 3677887777777666543
|
| >3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.53 E-value=3.4e-08 Score=71.86 Aligned_cols=74 Identities=14% Similarity=0.100 Sum_probs=55.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-CCCCCceeEEEeeCCCHHHHHHHHHhcccccceE
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-FPTALVDRYITFDALDPTDTALKLSLISQEITNL 86 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v 86 (211)
++++++|+|+ |.+|+++++.|. +.|++|++++|++.... ....++. ++.+|.++++.+.++ ++.. +|.|
T Consensus 5 ~~~~v~I~G~-G~iG~~la~~L~-----~~g~~V~~id~~~~~~~~~~~~~~~-~~~gd~~~~~~l~~~--~~~~-~d~v 74 (141)
T 3llv_A 5 GRYEYIVIGS-EAAGVGLVRELT-----AAGKKVLAVDKSKEKIELLEDEGFD-AVIADPTDESFYRSL--DLEG-VSAV 74 (141)
T ss_dssp -CCSEEEECC-SHHHHHHHHHHH-----HTTCCEEEEESCHHHHHHHHHTTCE-EEECCTTCHHHHHHS--CCTT-CSEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHH-----HCCCeEEEEECCHHHHHHHHHCCCc-EEECCCCCHHHHHhC--Cccc-CCEE
Confidence 3468999996 999999999999 68999999999865421 1224677 899999999876654 2222 6777
Q ss_pred Eeecc
Q 028258 87 FWVPL 91 (211)
Q Consensus 87 ~~~a~ 91 (211)
+.+..
T Consensus 75 i~~~~ 79 (141)
T 3llv_A 75 LITGS 79 (141)
T ss_dssp EECCS
T ss_pred EEecC
Confidence 76654
|
| >2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=98.46 E-value=1.4e-06 Score=68.87 Aligned_cols=78 Identities=13% Similarity=0.092 Sum_probs=55.2
Q ss_pred CCCeEEEEcC----------------CChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHH
Q 028258 8 PKSVALIIGV----------------TGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTD 71 (211)
Q Consensus 8 ~~~~ilVtGa----------------tG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~ 71 (211)
.+|+|||||| ||.+|.+++++|+ ..|++|+.+.|..........+++ ..|+...++
T Consensus 2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~-----~~Ga~V~lv~~~~~~~~~~~~~~~---~~~v~s~~e 73 (232)
T 2gk4_A 2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLL-----SAGYEVCLITTKRALKPEPHPNLS---IREITNTKD 73 (232)
T ss_dssp -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHH-----HTTCEEEEEECTTSCCCCCCTTEE---EEECCSHHH
T ss_pred CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHH-----HCCCEEEEEeCCccccccCCCCeE---EEEHhHHHH
Confidence 4689999999 9999999999999 799999999997542211123455 456666655
Q ss_pred HHHHHH-hcccccceEEeecccCC
Q 028258 72 TALKLS-LISQEITNLFWVPLQVQ 94 (211)
Q Consensus 72 ~~~~~~-~~~~~~~~v~~~a~~~~ 94 (211)
+.+.+. .... +|.+|++|+...
T Consensus 74 m~~~v~~~~~~-~Dili~aAAvsD 96 (232)
T 2gk4_A 74 LLIEMQERVQD-YQVLIHSMAVSD 96 (232)
T ss_dssp HHHHHHHHGGG-CSEEEECSBCCS
T ss_pred HHHHHHHhcCC-CCEEEEcCcccc
Confidence 444433 3333 799999998654
|
| >1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A* | Back alignment and structure |
|---|
Probab=98.41 E-value=6.1e-07 Score=74.21 Aligned_cols=94 Identities=12% Similarity=-0.019 Sum_probs=62.9
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCC--cEEEEEeC--CCCCC-----------CCCCCCceeEEEeeCCCHHHHHHH
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSP--WKVYGAAR--RPPPG-----------WFPTALVDRYITFDALDPTDTALK 75 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g--~~V~~~~R--~~~~~-----------~~~~~~~~~~i~~Dl~d~~~~~~~ 75 (211)
+|+||||+|++|++++..|+. ++ .++..+++ ++.+. ......++ +...| +++.++
T Consensus 2 KI~V~GaaG~vG~~l~~~L~~-----~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~-i~~~~----d~l~~a 71 (313)
T 1hye_A 2 KVTIIGASGRVGSATALLLAK-----EPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDAN-IYVES----DENLRI 71 (313)
T ss_dssp EEEEETTTSHHHHHHHHHHHT-----CTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCE-EEEEE----TTCGGG
T ss_pred EEEEECCCChhHHHHHHHHHh-----CCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeE-EEeCC----cchHHH
Confidence 699999999999999999983 44 35777877 43210 00011222 22211 112334
Q ss_pred HHhcccccceEEeecccCCc---hhHHHHhhcHHHHHHHHHHHHhc
Q 028258 76 LSLISQEITNLFWVPLQVQE---SEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 76 ~~~~~~~~~~v~~~a~~~~~---~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
+++ .|+|||+|+.... +..+.+..|+.+++++++++.+.
T Consensus 72 l~g----aD~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~ 113 (313)
T 1hye_A 72 IDE----SDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEI 113 (313)
T ss_dssp GTT----CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hCC----CCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence 554 6899999986542 34567899999999999999998
|
| >1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A* | Back alignment and structure |
|---|
Probab=98.41 E-value=2.1e-06 Score=67.67 Aligned_cols=76 Identities=12% Similarity=0.063 Sum_probs=56.1
Q ss_pred CCCCeEEEEcC----------------CChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHH
Q 028258 7 NPKSVALIIGV----------------TGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPT 70 (211)
Q Consensus 7 ~~~~~ilVtGa----------------tG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~ 70 (211)
+.+|+|||||| ||.+|.+++++|+ ..|++|+++.|+.... ...+++ .+|+.+.+
T Consensus 6 l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~-----~~Ga~V~l~~~~~~l~--~~~g~~---~~dv~~~~ 75 (226)
T 1u7z_A 6 LKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAA-----RRGANVTLVSGPVSLP--TPPFVK---RVDVMTAL 75 (226)
T ss_dssp TTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHH-----HTTCEEEEEECSCCCC--CCTTEE---EEECCSHH
T ss_pred CCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHH-----HCCCEEEEEECCcccc--cCCCCe---EEccCcHH
Confidence 45799999999 7999999999999 7999999988865321 112344 57888876
Q ss_pred HHHHHH-HhcccccceEEeecccC
Q 028258 71 DTALKL-SLISQEITNLFWVPLQV 93 (211)
Q Consensus 71 ~~~~~~-~~~~~~~~~v~~~a~~~ 93 (211)
++.+.+ +.... +|++|++|+..
T Consensus 76 ~~~~~v~~~~~~-~Dili~~Aav~ 98 (226)
T 1u7z_A 76 EMEAAVNASVQQ-QNIFIGCAAVA 98 (226)
T ss_dssp HHHHHHHHHGGG-CSEEEECCBCC
T ss_pred HHHHHHHHhcCC-CCEEEECCccc
Confidence 654444 33333 89999999864
|
| >3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.33 E-value=9.7e-07 Score=74.38 Aligned_cols=72 Identities=17% Similarity=0.073 Sum_probs=55.8
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccceEEe
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITNLFW 88 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~~ 88 (211)
+++|+|+|| |++|+.+++.|. +.++|.+.+|+........+.+. .+.+|+.|.+++.+.+++ .|.|++
T Consensus 16 ~mkilvlGa-G~vG~~~~~~L~------~~~~v~~~~~~~~~~~~~~~~~~-~~~~d~~d~~~l~~~~~~----~DvVi~ 83 (365)
T 3abi_A 16 HMKVLILGA-GNIGRAIAWDLK------DEFDVYIGDVNNENLEKVKEFAT-PLKVDASNFDKLVEVMKE----FELVIG 83 (365)
T ss_dssp CCEEEEECC-SHHHHHHHHHHT------TTSEEEEEESCHHHHHHHTTTSE-EEECCTTCHHHHHHHHTT----CSEEEE
T ss_pred ccEEEEECC-CHHHHHHHHHHh------cCCCeEEEEcCHHHHHHHhccCC-cEEEecCCHHHHHHHHhC----CCEEEE
Confidence 457999998 999999999987 45789998887543211235567 889999999999998886 577888
Q ss_pred eccc
Q 028258 89 VPLQ 92 (211)
Q Consensus 89 ~a~~ 92 (211)
++..
T Consensus 84 ~~p~ 87 (365)
T 3abi_A 84 ALPG 87 (365)
T ss_dssp CCCG
T ss_pred ecCC
Confidence 7743
|
| >1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A | Back alignment and structure |
|---|
Probab=98.29 E-value=1.1e-07 Score=78.42 Aligned_cols=91 Identities=8% Similarity=-0.056 Sum_probs=60.6
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCc--EEEEEeC--CCCCCC----------CCCCCceeEEEeeCCCHHHHHHHH
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPW--KVYGAAR--RPPPGW----------FPTALVDRYITFDALDPTDTALKL 76 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~--~V~~~~R--~~~~~~----------~~~~~~~~~i~~Dl~d~~~~~~~~ 76 (211)
+|+||||+|++|++++..|+. .+. ++..+++ ++.+.. .....++ +.. + + .+++
T Consensus 2 KI~IiGAaG~vG~~l~~~L~~-----~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~-v~~-~--~----~~a~ 68 (303)
T 1o6z_A 2 KVSVVGAAGTVGAAAGYNIAL-----RDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTR-VRQ-G--G----YEDT 68 (303)
T ss_dssp EEEEETTTSHHHHHHHHHHHH-----TTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCE-EEE-C--C----GGGG
T ss_pred EEEEECCCChHHHHHHHHHHh-----CCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcE-EEe-C--C----HHHh
Confidence 699999999999999999983 443 5777777 432110 0011222 221 1 1 1223
Q ss_pred HhcccccceEEeecccCCc---hhHHHHhhcHHHHHHHHHHHHhc
Q 028258 77 SLISQEITNLFWVPLQVQE---SEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 77 ~~~~~~~~~v~~~a~~~~~---~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
++ .|+|||+++.... ...+....|+.+++++++++.+.
T Consensus 69 ~~----aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~ 109 (303)
T 1o6z_A 69 AG----SDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEH 109 (303)
T ss_dssp TT----CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CC----CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 43 6899999986542 34567799999999999999987
|
| >4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A | Back alignment and structure |
|---|
Probab=98.25 E-value=3.4e-06 Score=71.37 Aligned_cols=82 Identities=12% Similarity=0.017 Sum_probs=61.6
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCC-------------------CCCCceeEEEeeCC
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF-------------------PTALVDRYITFDAL 67 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~-------------------~~~~~~~~i~~Dl~ 67 (211)
..+|++||||||+++|.+.+..|.. ..|..|+++.|....... ...... .+.||++
T Consensus 48 ~~pK~vLVtGaSsGiGlA~AialAf----~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~-~i~~Dv~ 122 (401)
T 4ggo_A 48 KAPKNVLVLGCSNGYGLASRITAAF----GYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSV-TIDGDAF 122 (401)
T ss_dssp CCCCEEEEESCSSHHHHHHHHHHHH----HHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEE-EEESCTT
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHh----hCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCce-eEeCCCC
Confidence 3479999999999999999888862 367889988886543210 023456 8899999
Q ss_pred CHHHHHHHHHhccc---ccceEEeecccC
Q 028258 68 DPTDTALKLSLISQ---EITNLFWVPLQV 93 (211)
Q Consensus 68 d~~~~~~~~~~~~~---~~~~v~~~a~~~ 93 (211)
+++.+++.++.+.. .+|.++|.++..
T Consensus 123 d~e~i~~vi~~i~~~~G~IDiLVhS~A~~ 151 (401)
T 4ggo_A 123 SDEIKAQVIEEAKKKGIKFDLIVYSLASP 151 (401)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEEECCCCS
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEEecccc
Confidence 99988877766542 399999998754
|
| >4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes} | Back alignment and structure |
|---|
Probab=98.23 E-value=1.9e-06 Score=73.64 Aligned_cols=74 Identities=18% Similarity=0.102 Sum_probs=58.7
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCC---cEEEEEeCCCCCCC-----C---CCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSP---WKVYGAARRPPPGW-----F---PTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g---~~V~~~~R~~~~~~-----~---~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
++|+|+|| |+||+++++.|+ +.+ .+|++.+|+..+.. . ...+++ .+.+|++|.+++.+.+++
T Consensus 2 ~kVlIiGa-GgiG~~ia~~L~-----~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~-~~~~D~~d~~~l~~~l~~ 74 (405)
T 4ina_A 2 AKVLQIGA-GGVGGVVAHKMA-----MNREVFSHITLASRTLSKCQEIAQSIKAKGYGEID-ITTVDADSIEELVALINE 74 (405)
T ss_dssp CEEEEECC-SHHHHHHHHHHH-----TCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCE-EEECCTTCHHHHHHHHHH
T ss_pred CEEEEECC-CHHHHHHHHHHH-----hCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceE-EEEecCCCHHHHHHHHHh
Confidence 57999998 999999999999 455 38999999865421 0 013578 899999999999999988
Q ss_pred cccccceEEeeccc
Q 028258 79 ISQEITNLFWVPLQ 92 (211)
Q Consensus 79 ~~~~~~~v~~~a~~ 92 (211)
.+ +|.||++++.
T Consensus 75 ~~--~DvVin~ag~ 86 (405)
T 4ina_A 75 VK--PQIVLNIALP 86 (405)
T ss_dssp HC--CSEEEECSCG
T ss_pred hC--CCEEEECCCc
Confidence 64 7899999864
|
| >1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=98.23 E-value=9.8e-07 Score=65.03 Aligned_cols=72 Identities=14% Similarity=0.010 Sum_probs=53.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC-C---CC-CCCCCceeEEEeeCCCHHHHHHH-HHhccc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP-P---GW-FPTALVDRYITFDALDPTDTALK-LSLISQ 81 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~-~---~~-~~~~~~~~~i~~Dl~d~~~~~~~-~~~~~~ 81 (211)
.+++++|+|+ |.+|+++++.|. +.|++|++++|++. . .. ....+++ ++.+|.+|++.+.++ +++
T Consensus 2 ~~~~vlI~G~-G~vG~~la~~L~-----~~g~~V~vid~~~~~~~~~~~~~~~~~~~-~i~gd~~~~~~l~~a~i~~--- 71 (153)
T 1id1_A 2 RKDHFIVCGH-SILAINTILQLN-----QRGQNVTVISNLPEDDIKQLEQRLGDNAD-VIPGDSNDSSVLKKAGIDR--- 71 (153)
T ss_dssp CCSCEEEECC-SHHHHHHHHHHH-----HTTCCEEEEECCCHHHHHHHHHHHCTTCE-EEESCTTSHHHHHHHTTTT---
T ss_pred CCCcEEEECC-CHHHHHHHHHHH-----HCCCCEEEEECCChHHHHHHHHhhcCCCe-EEEcCCCCHHHHHHcChhh---
Confidence 4578999995 999999999999 68999999999742 1 10 0124688 999999999877665 443
Q ss_pred ccceEEeec
Q 028258 82 EITNLFWVP 90 (211)
Q Consensus 82 ~~~~v~~~a 90 (211)
.+.|+.+.
T Consensus 72 -ad~vi~~~ 79 (153)
T 1id1_A 72 -CRAILALS 79 (153)
T ss_dssp -CSEEEECS
T ss_pred -CCEEEEec
Confidence 56666555
|
| >2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.05 E-value=3e-06 Score=73.76 Aligned_cols=75 Identities=15% Similarity=0.102 Sum_probs=58.3
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-C-CCCCceeEEEeeCCCHHHHHHHHHhcccccceE
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-F-PTALVDRYITFDALDPTDTALKLSLISQEITNL 86 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-~-~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v 86 (211)
+++|+|+|| |++|+++++.|++ ..+++|++++|++.+.. + ...+++ .+.+|+.|.+++.+++++ +|.|
T Consensus 23 ~k~VlIiGA-GgiG~aia~~L~~----~~g~~V~v~~R~~~ka~~la~~~~~~-~~~~D~~d~~~l~~~l~~----~DvV 92 (467)
T 2axq_A 23 GKNVLLLGS-GFVAQPVIDTLAA----NDDINVTVACRTLANAQALAKPSGSK-AISLDVTDDSALDKVLAD----NDVV 92 (467)
T ss_dssp CEEEEEECC-STTHHHHHHHHHT----STTEEEEEEESSHHHHHHHHGGGTCE-EEECCTTCHHHHHHHHHT----SSEE
T ss_pred CCEEEEECC-hHHHHHHHHHHHh----CCCCeEEEEECCHHHHHHHHHhcCCc-EEEEecCCHHHHHHHHcC----CCEE
Confidence 478999997 9999999999994 33789999999765321 0 113567 888999999888888775 6889
Q ss_pred EeecccC
Q 028258 87 FWVPLQV 93 (211)
Q Consensus 87 ~~~a~~~ 93 (211)
|+++...
T Consensus 93 In~tp~~ 99 (467)
T 2axq_A 93 ISLIPYT 99 (467)
T ss_dssp EECSCGG
T ss_pred EECCchh
Confidence 9998654
|
| >2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A* | Back alignment and structure |
|---|
Probab=98.04 E-value=1.2e-05 Score=59.29 Aligned_cols=74 Identities=14% Similarity=-0.026 Sum_probs=53.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-CC-CCCceeEEEeeCCCHHHHHHHHHhcccccce
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-FP-TALVDRYITFDALDPTDTALKLSLISQEITN 85 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-~~-~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~ 85 (211)
.+++++|+|+ |.+|+.+++.|. ..|++|++++|++.... .. ..+.. ++.+|..+++.+.++ ++.. +|.
T Consensus 18 ~~~~v~IiG~-G~iG~~la~~L~-----~~g~~V~vid~~~~~~~~~~~~~g~~-~~~~d~~~~~~l~~~--~~~~-ad~ 87 (155)
T 2g1u_A 18 KSKYIVIFGC-GRLGSLIANLAS-----SSGHSVVVVDKNEYAFHRLNSEFSGF-TVVGDAAEFETLKEC--GMEK-ADM 87 (155)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHH-----HTTCEEEEEESCGGGGGGSCTTCCSE-EEESCTTSHHHHHTT--TGGG-CSE
T ss_pred CCCcEEEECC-CHHHHHHHHHHH-----hCCCeEEEEECCHHHHHHHHhcCCCc-EEEecCCCHHHHHHc--Cccc-CCE
Confidence 3578999995 999999999999 68899999999876432 22 34667 788898887655443 1222 677
Q ss_pred EEeecc
Q 028258 86 LFWVPL 91 (211)
Q Consensus 86 v~~~a~ 91 (211)
||.+..
T Consensus 88 Vi~~~~ 93 (155)
T 2g1u_A 88 VFAFTN 93 (155)
T ss_dssp EEECSS
T ss_pred EEEEeC
Confidence 776664
|
| >1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=97.93 E-value=3.5e-06 Score=60.43 Aligned_cols=72 Identities=15% Similarity=-0.015 Sum_probs=51.9
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-CC-CCCceeEEEeeCCCHHHHHHHHHhcccccceEE
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-FP-TALVDRYITFDALDPTDTALKLSLISQEITNLF 87 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-~~-~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~ 87 (211)
++++|+|+ |.+|+.+++.|. +.|++|++++|++.... .. ..++. ++.+|..+++.+.+. .+.. .|.|+
T Consensus 5 m~i~IiG~-G~iG~~~a~~L~-----~~g~~v~~~d~~~~~~~~~~~~~~~~-~~~~d~~~~~~l~~~--~~~~-~d~vi 74 (140)
T 1lss_A 5 MYIIIAGI-GRVGYTLAKSLS-----EKGHDIVLIDIDKDICKKASAEIDAL-VINGDCTKIKTLEDA--GIED-ADMYI 74 (140)
T ss_dssp CEEEEECC-SHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHCSSE-EEESCTTSHHHHHHT--TTTT-CSEEE
T ss_pred CEEEEECC-CHHHHHHHHHHH-----hCCCeEEEEECCHHHHHHHHHhcCcE-EEEcCCCCHHHHHHc--Cccc-CCEEE
Confidence 57999986 999999999999 68899999999765321 11 12567 788999988765443 1222 68888
Q ss_pred eecc
Q 028258 88 WVPL 91 (211)
Q Consensus 88 ~~a~ 91 (211)
++..
T Consensus 75 ~~~~ 78 (140)
T 1lss_A 75 AVTG 78 (140)
T ss_dssp ECCS
T ss_pred EeeC
Confidence 7753
|
| >3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12} | Back alignment and structure |
|---|
Probab=97.91 E-value=3.4e-05 Score=55.88 Aligned_cols=74 Identities=18% Similarity=0.034 Sum_probs=54.8
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-CCCCCceeEEEeeCCCHHHHHHHHHhcccccce
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-FPTALVDRYITFDALDPTDTALKLSLISQEITN 85 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~ 85 (211)
.++++++|+| .|.+|+.+++.|. +.|++|+++++++.... ....++. ++.+|.++++.+.++ ++.. .+.
T Consensus 5 ~~~~~viIiG-~G~~G~~la~~L~-----~~g~~v~vid~~~~~~~~~~~~g~~-~i~gd~~~~~~l~~a--~i~~-ad~ 74 (140)
T 3fwz_A 5 DICNHALLVG-YGRVGSLLGEKLL-----ASDIPLVVIETSRTRVDELRERGVR-AVLGNAANEEIMQLA--HLEC-AKW 74 (140)
T ss_dssp CCCSCEEEEC-CSHHHHHHHHHHH-----HTTCCEEEEESCHHHHHHHHHTTCE-EEESCTTSHHHHHHT--TGGG-CSE
T ss_pred cCCCCEEEEC-cCHHHHHHHHHHH-----HCCCCEEEEECCHHHHHHHHHcCCC-EEECCCCCHHHHHhc--Cccc-CCE
Confidence 3467899999 5999999999999 68999999999876421 1235778 899999999876554 2222 566
Q ss_pred EEeec
Q 028258 86 LFWVP 90 (211)
Q Consensus 86 v~~~a 90 (211)
++.+.
T Consensus 75 vi~~~ 79 (140)
T 3fwz_A 75 LILTI 79 (140)
T ss_dssp EEECC
T ss_pred EEEEC
Confidence 65444
|
| >1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A* | Back alignment and structure |
|---|
Probab=97.89 E-value=3.1e-05 Score=63.93 Aligned_cols=108 Identities=14% Similarity=0.105 Sum_probs=69.2
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCC--cEEEEEeCCCCCC---CCCCCCceeEEEeeCCCHHHHHHHHHhcccccce
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSP--WKVYGAARRPPPG---WFPTALVDRYITFDALDPTDTALKLSLISQEITN 85 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g--~~V~~~~R~~~~~---~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~ 85 (211)
+|.|+||+|++|+.++..|+ ..+ .+|.++++++... .+.+.....-+..- ...+++.+++++ .|+
T Consensus 2 KI~IiGa~G~VG~~la~~L~-----~~~~~~ev~L~Di~~~~~~a~dL~~~~~~~~l~~~-~~t~d~~~a~~~----aDv 71 (314)
T 1mld_A 2 KVAVLGASGGIGQPLSLLLK-----NSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGY-LGPEQLPDCLKG----CDV 71 (314)
T ss_dssp EEEEETTTSTTHHHHHHHHH-----TCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEE-ESGGGHHHHHTT----CSE
T ss_pred EEEEECCCChHHHHHHHHHH-----hCCCCcEEEEEeCCccHHHHHHHhccCcCceEEEe-cCCCCHHHHhCC----CCE
Confidence 69999999999999999999 456 6899999876210 00111111001110 011235566776 578
Q ss_pred EEeecccCCc---hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEee
Q 028258 86 LFWVPLQVQE---SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLT 132 (211)
Q Consensus 86 v~~~a~~~~~---~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s 132 (211)
||++++.... +..+....|...++.+++.+.+. ++.. .++.+|
T Consensus 72 Vvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~---~p~a-~viv~s 117 (314)
T 1mld_A 72 VVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQH---CPDA-MICIIS 117 (314)
T ss_dssp EEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHH---CTTS-EEEECS
T ss_pred EEECCCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhh---CCCe-EEEEEC
Confidence 9999876542 33456788999999999999887 5543 344444
|
| >5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A* | Back alignment and structure |
|---|
Probab=97.87 E-value=3.5e-06 Score=70.21 Aligned_cols=112 Identities=13% Similarity=0.053 Sum_probs=68.0
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCC--CCCCcEEEEEeCCCC--CC-----CCCC---CCceeEEEeeCCCHHHHHHHH
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTT--PGSPWKVYGAARRPP--PG-----WFPT---ALVDRYITFDALDPTDTALKL 76 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~--~~~g~~V~~~~R~~~--~~-----~~~~---~~~~~~i~~Dl~d~~~~~~~~ 76 (211)
+.+|+||||+|+||++++..|+..+. +.+...+.++++.+. .. .+.+ +-+. -+.. .+...+.+
T Consensus 3 ~~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~~-~~~~----~~~~~~~~ 77 (333)
T 5mdh_A 3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLK-DVIA----TDKEEIAF 77 (333)
T ss_dssp CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEE-EEEE----ESCHHHHT
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhcccC-CEEE----cCCcHHHh
Confidence 35799999999999999999983111 011123888887542 10 0011 1112 1111 11234445
Q ss_pred HhcccccceEEeecccCC---chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEee
Q 028258 77 SLISQEITNLFWVPLQVQ---ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLT 132 (211)
Q Consensus 77 ~~~~~~~~~v~~~a~~~~---~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s 132 (211)
++ .|+||++|+... .+..+.++.|...++++++.+.+. +++-..++.+|
T Consensus 78 ~d----aDvVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~---~~~~~~vivvs 129 (333)
T 5mdh_A 78 KD----LDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKY---AKKSVKVIVVG 129 (333)
T ss_dssp TT----CSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHH---SCTTCEEEECS
T ss_pred CC----CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh---CCCCeEEEEcC
Confidence 55 688999987653 244567889999999999999988 44322444444
|
| >1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 | Back alignment and structure |
|---|
Probab=97.77 E-value=8.3e-06 Score=62.37 Aligned_cols=77 Identities=18% Similarity=0.105 Sum_probs=51.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-CCCCCceeEEEeeCCCHHHHHHHHHhcc-cccce
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-FPTALVDRYITFDALDPTDTALKLSLIS-QEITN 85 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-~~~~~~~~~i~~Dl~d~~~~~~~~~~~~-~~~~~ 85 (211)
.++++||+||+|.||..+++.+. ..|++|++++|++.+.. ....+.. . ..|..+.+..+...+... ..+|+
T Consensus 38 ~g~~vlV~Ga~ggiG~~~~~~~~-----~~G~~V~~~~~~~~~~~~~~~~g~~-~-~~d~~~~~~~~~~~~~~~~~~~D~ 110 (198)
T 1pqw_A 38 PGERVLIHSATGGVGMAAVSIAK-----MIGARIYTTAGSDAKREMLSRLGVE-Y-VGDSRSVDFADEILELTDGYGVDV 110 (198)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHH-----HHTCEEEEEESSHHHHHHHHTTCCS-E-EEETTCSTHHHHHHHHTTTCCEEE
T ss_pred CCCEEEEeeCCChHHHHHHHHHH-----HcCCEEEEEeCCHHHHHHHHHcCCC-E-EeeCCcHHHHHHHHHHhCCCCCeE
Confidence 36789999999999999999998 68899999998754321 0112233 2 357776543333332221 12789
Q ss_pred EEeecc
Q 028258 86 LFWVPL 91 (211)
Q Consensus 86 v~~~a~ 91 (211)
++++++
T Consensus 111 vi~~~g 116 (198)
T 1pqw_A 111 VLNSLA 116 (198)
T ss_dssp EEECCC
T ss_pred EEECCc
Confidence 998875
|
| >2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A | Back alignment and structure |
|---|
Probab=97.71 E-value=4.8e-05 Score=59.75 Aligned_cols=70 Identities=14% Similarity=0.030 Sum_probs=52.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-CCCCCceeEEEeeCCCHHHHHHH-HHhcccccce
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-FPTALVDRYITFDALDPTDTALK-LSLISQEITN 85 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-~~~~~~~~~i~~Dl~d~~~~~~~-~~~~~~~~~~ 85 (211)
.+++++|+|+ |.+|+.+++.|. +.|+ |++++|++.... .. .+++ ++.+|.+|++.+.++ +++ .+.
T Consensus 8 ~~~~viI~G~-G~~G~~la~~L~-----~~g~-v~vid~~~~~~~~~~-~~~~-~i~gd~~~~~~l~~a~i~~----ad~ 74 (234)
T 2aef_A 8 KSRHVVICGW-SESTLECLRELR-----GSEV-FVLAEDENVRKKVLR-SGAN-FVHGDPTRVSDLEKANVRG----ARA 74 (234)
T ss_dssp --CEEEEESC-CHHHHHHHHHST-----TSEE-EEEESCGGGHHHHHH-TTCE-EEESCTTCHHHHHHTTCTT----CSE
T ss_pred CCCEEEEECC-ChHHHHHHHHHH-----hCCe-EEEEECCHHHHHHHh-cCCe-EEEcCCCCHHHHHhcCcch----hcE
Confidence 4578999996 999999999999 6889 999998766321 12 5688 999999999876665 343 566
Q ss_pred EEeec
Q 028258 86 LFWVP 90 (211)
Q Consensus 86 v~~~a 90 (211)
|+.+.
T Consensus 75 vi~~~ 79 (234)
T 2aef_A 75 VIVDL 79 (234)
T ss_dssp EEECC
T ss_pred EEEcC
Confidence 66554
|
| >3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=97.67 E-value=4.3e-05 Score=57.67 Aligned_cols=73 Identities=18% Similarity=0.120 Sum_probs=52.6
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCC-CcEEEEEeCCCCCCC-CCCCCceeEEEeeCCCHHHHHHHHHhcccccceE
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGS-PWKVYGAARRPPPGW-FPTALVDRYITFDALDPTDTALKLSLISQEITNL 86 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~-g~~V~~~~R~~~~~~-~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v 86 (211)
+++++|+| .|.+|+.+++.|. +. |++|++++|++.+.. ....+++ ++.+|.++++.+.++ .++.. .|.|
T Consensus 39 ~~~v~IiG-~G~~G~~~a~~L~-----~~~g~~V~vid~~~~~~~~~~~~g~~-~~~gd~~~~~~l~~~-~~~~~-ad~v 109 (183)
T 3c85_A 39 HAQVLILG-MGRIGTGAYDELR-----ARYGKISLGIEIREEAAQQHRSEGRN-VISGDATDPDFWERI-LDTGH-VKLV 109 (183)
T ss_dssp TCSEEEEC-CSHHHHHHHHHHH-----HHHCSCEEEEESCHHHHHHHHHTTCC-EEECCTTCHHHHHTB-CSCCC-CCEE
T ss_pred CCcEEEEC-CCHHHHHHHHHHH-----hccCCeEEEEECCHHHHHHHHHCCCC-EEEcCCCCHHHHHhc-cCCCC-CCEE
Confidence 56899998 6999999999999 67 999999999875421 1124677 888999998765433 01222 6777
Q ss_pred Eeec
Q 028258 87 FWVP 90 (211)
Q Consensus 87 ~~~a 90 (211)
+.+.
T Consensus 110 i~~~ 113 (183)
T 3c85_A 110 LLAM 113 (183)
T ss_dssp EECC
T ss_pred EEeC
Confidence 7655
|
| >3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=97.65 E-value=1.8e-05 Score=66.10 Aligned_cols=104 Identities=13% Similarity=0.052 Sum_probs=66.5
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCC--cEEEEEeCCCCCCC----------CCCCCceeEEEeeCCCHHHHHHHH
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSP--WKVYGAARRPPPGW----------FPTALVDRYITFDALDPTDTALKL 76 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g--~~V~~~~R~~~~~~----------~~~~~~~~~i~~Dl~d~~~~~~~~ 76 (211)
+++|.|+||+|++|+.++..|+ ..| .+|.+++++..+.. +....+. + . .+..+++
T Consensus 8 ~~KV~ViGaaG~VG~~~a~~l~-----~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~-~-t------~d~~~al 74 (343)
T 3fi9_A 8 EEKLTIVGAAGMIGSNMAQTAA-----MMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLT-F-T------SDIKEAL 74 (343)
T ss_dssp SSEEEEETTTSHHHHHHHHHHH-----HTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCE-E-E------SCHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHH-----hcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceE-E-c------CCHHHHh
Confidence 4689999999999999999887 355 47999988654210 1111111 1 1 1244556
Q ss_pred HhcccccceEEeecccCCc---hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEee
Q 028258 77 SLISQEITNLFWVPLQVQE---SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLT 132 (211)
Q Consensus 77 ~~~~~~~~~v~~~a~~~~~---~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s 132 (211)
++ .|+||++++.... +..+....|...++.+.+.+.+. ++....++.+|
T Consensus 75 ~d----ADvVvitaG~p~kpG~~R~dLl~~N~~I~~~i~~~i~~~---~p~a~~vlvvs 126 (343)
T 3fi9_A 75 TD----AKYIVSSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKSY---CPDCKHVIIIF 126 (343)
T ss_dssp TT----EEEEEECCC-------CHHHHHHHHHHHHHHHHHHHHHH---CTTCCEEEECS
T ss_pred CC----CCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh---ccCcEEEEEec
Confidence 65 5788888876532 34456788999999999999988 55443344443
|
| >1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* | Back alignment and structure |
|---|
Probab=97.51 E-value=2.9e-05 Score=64.22 Aligned_cols=77 Identities=18% Similarity=0.051 Sum_probs=51.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-CCCCCceeEEEeeCCCHHHHHHHHHhcc-cccce
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-FPTALVDRYITFDALDPTDTALKLSLIS-QEITN 85 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-~~~~~~~~~i~~Dl~d~~~~~~~~~~~~-~~~~~ 85 (211)
.++++||+||+|.||..+++.+. ..|++|++++|++.+.. ...-+.. ..+|..+.+++.+.+.... ..+|+
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~~~-----~~G~~V~~~~~~~~~~~~~~~~g~~--~~~d~~~~~~~~~~~~~~~~~~~d~ 217 (333)
T 1v3u_A 145 GGETVLVSAAAGAVGSVVGQIAK-----LKGCKVVGAAGSDEKIAYLKQIGFD--AAFNYKTVNSLEEALKKASPDGYDC 217 (333)
T ss_dssp SSCEEEEESTTBHHHHHHHHHHH-----HTTCEEEEEESSHHHHHHHHHTTCS--EEEETTSCSCHHHHHHHHCTTCEEE
T ss_pred CCCEEEEecCCCcHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHhcCCc--EEEecCCHHHHHHHHHHHhCCCCeE
Confidence 35789999999999999999998 68999999998754311 0011222 2357776333444443321 12789
Q ss_pred EEeecc
Q 028258 86 LFWVPL 91 (211)
Q Consensus 86 v~~~a~ 91 (211)
+|++++
T Consensus 218 vi~~~g 223 (333)
T 1v3u_A 218 YFDNVG 223 (333)
T ss_dssp EEESSC
T ss_pred EEECCC
Confidence 998886
|
| >2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.51 E-value=4.9e-05 Score=63.29 Aligned_cols=78 Identities=13% Similarity=0.032 Sum_probs=51.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCC-CCCCceeEEEeeCCCHHHHHHHHHhcc-cccce
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF-PTALVDRYITFDALDPTDTALKLSLIS-QEITN 85 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~-~~~~~~~~i~~Dl~d~~~~~~~~~~~~-~~~~~ 85 (211)
.++++||+||+|.||..+++.+. ..|++|++++|++.+... ..-+.. . ..|+.+.+++.+.+.... ..+|+
T Consensus 169 ~g~~vlV~Ga~ggiG~~~~~~a~-----~~Ga~V~~~~~~~~~~~~~~~~g~~-~-~~d~~~~~~~~~~~~~~~~~~~D~ 241 (347)
T 2hcy_A 169 AGHWVAISGAAGGLGSLAVQYAK-----AMGYRVLGIDGGEGKEELFRSIGGE-V-FIDFTKEKDIVGAVLKATDGGAHG 241 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEECSTTHHHHHHHTTCC-E-EEETTTCSCHHHHHHHHHTSCEEE
T ss_pred CCCEEEEECCCchHHHHHHHHHH-----HCCCcEEEEcCCHHHHHHHHHcCCc-e-EEecCccHhHHHHHHHHhCCCCCE
Confidence 45789999999999999999998 688999999987654210 111222 2 347775444444443221 02788
Q ss_pred EEeeccc
Q 028258 86 LFWVPLQ 92 (211)
Q Consensus 86 v~~~a~~ 92 (211)
+|++++.
T Consensus 242 vi~~~g~ 248 (347)
T 2hcy_A 242 VINVSVS 248 (347)
T ss_dssp EEECSSC
T ss_pred EEECCCc
Confidence 9888763
|
| >3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=97.46 E-value=5.9e-05 Score=58.61 Aligned_cols=70 Identities=13% Similarity=-0.019 Sum_probs=51.9
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCC--CCCCceeEEEeeCCCHHHHHHHHHhcccccceEEe
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF--PTALVDRYITFDALDPTDTALKLSLISQEITNLFW 88 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~--~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~~ 88 (211)
+++|+|+ |.+|+++++.|. +.|++|+++++++..... ...+++ ++.+|.++++.+.++ ++.. .+.|+.
T Consensus 2 ~iiIiG~-G~~G~~la~~L~-----~~g~~v~vid~~~~~~~~l~~~~~~~-~i~gd~~~~~~l~~a--~i~~-ad~vi~ 71 (218)
T 3l4b_C 2 KVIIIGG-ETTAYYLARSML-----SRKYGVVIINKDRELCEEFAKKLKAT-IIHGDGSHKEILRDA--EVSK-NDVVVI 71 (218)
T ss_dssp CEEEECC-HHHHHHHHHHHH-----HTTCCEEEEESCHHHHHHHHHHSSSE-EEESCTTSHHHHHHH--TCCT-TCEEEE
T ss_pred EEEEECC-CHHHHHHHHHHH-----hCCCeEEEEECCHHHHHHHHHHcCCe-EEEcCCCCHHHHHhc--Cccc-CCEEEE
Confidence 5899995 999999999999 689999999998764210 124678 899999998877665 2222 566654
Q ss_pred ec
Q 028258 89 VP 90 (211)
Q Consensus 89 ~a 90 (211)
+.
T Consensus 72 ~~ 73 (218)
T 3l4b_C 72 LT 73 (218)
T ss_dssp CC
T ss_pred ec
Confidence 43
|
| >2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.35 E-value=0.00011 Score=61.88 Aligned_cols=74 Identities=12% Similarity=-0.039 Sum_probs=54.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCC-CC-CCceeEEEeeCCCHHHHHHHHHhcccccce
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF-PT-ALVDRYITFDALDPTDTALKLSLISQEITN 85 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~-~~-~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~ 85 (211)
.+++++|+|+ |.||+.+++.|. ..|++|++++|++.+... .. .+. .+.+|..+.+++.+.+++ +|+
T Consensus 165 ~~~~V~ViGa-G~iG~~~a~~l~-----~~Ga~V~~~d~~~~~~~~~~~~~g~--~~~~~~~~~~~l~~~~~~----~Dv 232 (369)
T 2eez_A 165 APASVVILGG-GTVGTNAAKIAL-----GMGAQVTILDVNHKRLQYLDDVFGG--RVITLTATEANIKKSVQH----ADL 232 (369)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHTTT--SEEEEECCHHHHHHHHHH----CSE
T ss_pred CCCEEEEECC-CHHHHHHHHHHH-----hCCCEEEEEECCHHHHHHHHHhcCc--eEEEecCCHHHHHHHHhC----CCE
Confidence 4689999998 999999999999 689999999998653210 00 111 245677888888888775 688
Q ss_pred EEeecccC
Q 028258 86 LFWVPLQV 93 (211)
Q Consensus 86 v~~~a~~~ 93 (211)
|+++++..
T Consensus 233 Vi~~~g~~ 240 (369)
T 2eez_A 233 LIGAVLVP 240 (369)
T ss_dssp EEECCC--
T ss_pred EEECCCCC
Confidence 88888654
|
| >4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A* | Back alignment and structure |
|---|
Probab=97.31 E-value=9.7e-05 Score=61.10 Aligned_cols=77 Identities=16% Similarity=0.022 Sum_probs=50.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-C-CCCCceeEEEeeCCCHHHHHHHHHhcccccce
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-F-PTALVDRYITFDALDPTDTALKLSLISQEITN 85 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-~-~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~ 85 (211)
.++++||+||+|.||..+++.+. ..|++|++++|++.+.. . ..-+.. . ..|..+.+......+.....+|+
T Consensus 149 ~g~~vlI~Ga~g~iG~~~~~~a~-----~~Ga~Vi~~~~~~~~~~~~~~~~g~~-~-~~~~~~~~~~~~~~~~~~~~~d~ 221 (336)
T 4b7c_A 149 NGETVVISGAAGAVGSVAGQIAR-----LKGCRVVGIAGGAEKCRFLVEELGFD-G-AIDYKNEDLAAGLKRECPKGIDV 221 (336)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHH-----HTTCEEEEEESSHHHHHHHHHTTCCS-E-EEETTTSCHHHHHHHHCTTCEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHcCCC-E-EEECCCHHHHHHHHHhcCCCceE
Confidence 36789999999999999999988 68999999998765321 1 112223 2 35666543322222211113789
Q ss_pred EEeecc
Q 028258 86 LFWVPL 91 (211)
Q Consensus 86 v~~~a~ 91 (211)
+|.+++
T Consensus 222 vi~~~g 227 (336)
T 4b7c_A 222 FFDNVG 227 (336)
T ss_dssp EEESSC
T ss_pred EEECCC
Confidence 988886
|
| >1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.28 E-value=9.9e-05 Score=61.66 Aligned_cols=77 Identities=13% Similarity=0.100 Sum_probs=50.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCC-CCCCceeEEEeeCCCHHHHHHHHHhcc-cccce
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF-PTALVDRYITFDALDPTDTALKLSLIS-QEITN 85 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~-~~~~~~~~i~~Dl~d~~~~~~~~~~~~-~~~~~ 85 (211)
.++++||+||+|.+|..+++.+. ..|++|++++|++.+... ..-+.. . .+|..+.+..++..+... ..+|.
T Consensus 170 ~g~~vlV~GasggiG~~~~~~a~-----~~Ga~Vi~~~~~~~~~~~~~~~ga~-~-~~d~~~~~~~~~~~~~~~~~~~D~ 242 (351)
T 1yb5_A 170 AGESVLVHGASGGVGLAACQIAR-----AYGLKILGTAGTEEGQKIVLQNGAH-E-VFNHREVNYIDKIKKYVGEKGIDI 242 (351)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHH-----HTTCEEEEEESSHHHHHHHHHTTCS-E-EEETTSTTHHHHHHHHHCTTCEEE
T ss_pred CcCEEEEECCCChHHHHHHHHHH-----HCCCEEEEEeCChhHHHHHHHcCCC-E-EEeCCCchHHHHHHHHcCCCCcEE
Confidence 35789999999999999999998 689999999987653210 111222 2 357766543332222111 12789
Q ss_pred EEeecc
Q 028258 86 LFWVPL 91 (211)
Q Consensus 86 v~~~a~ 91 (211)
+|++++
T Consensus 243 vi~~~G 248 (351)
T 1yb5_A 243 IIEMLA 248 (351)
T ss_dssp EEESCH
T ss_pred EEECCC
Confidence 998886
|
| >3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A* | Back alignment and structure |
|---|
Probab=97.26 E-value=0.001 Score=55.15 Aligned_cols=92 Identities=17% Similarity=0.052 Sum_probs=63.0
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCc--EEEEEeCCCCCC-----------CCCCCCceeEEEeeCCCHHHHHHH
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPW--KVYGAARRPPPG-----------WFPTALVDRYITFDALDPTDTALK 75 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~--~V~~~~R~~~~~-----------~~~~~~~~~~i~~Dl~d~~~~~~~ 75 (211)
.++|.|+|| |.+|+.++..|+ ..|. +|+++++++.+. .+....++ ....|. ++
T Consensus 5 ~~kI~ViGa-G~vG~~~a~~l~-----~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~-i~~~~~-------~a 70 (326)
T 3pqe_A 5 VNKVALIGA-GFVGSSYAFALI-----NQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVK-TSYGTY-------ED 70 (326)
T ss_dssp CCEEEEECC-SHHHHHHHHHHH-----HHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCE-EEEECG-------GG
T ss_pred CCEEEEECC-CHHHHHHHHHHH-----hCCCCceEEEEecchHHHHHHHHHHHhccccccCCeE-EEeCcH-------HH
Confidence 467999996 999999999998 4565 899999865421 01112344 433332 12
Q ss_pred HHhcccccceEEeecccCCc---hhHHHHhhcHHHHHHHHHHHHhc
Q 028258 76 LSLISQEITNLFWVPLQVQE---SEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 76 ~~~~~~~~~~v~~~a~~~~~---~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
+++ .|+||.+++.... +..+....|...++.+.+.+.+.
T Consensus 71 ~~~----aDvVvi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~ 112 (326)
T 3pqe_A 71 CKD----ADIVCICAGANQKPGETRLELVEKNLKIFKGIVSEVMAS 112 (326)
T ss_dssp GTT----CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hCC----CCEEEEecccCCCCCccHHHHHHHHHHHHHHHHHHHHHh
Confidence 443 6788888876432 34556788999999999999887
|
| >1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.25 E-value=6.1e-05 Score=62.09 Aligned_cols=77 Identities=12% Similarity=-0.014 Sum_probs=50.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCC-CCCCceeEEEeeCCCHHHHHHHHHhcc-cccce
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF-PTALVDRYITFDALDPTDTALKLSLIS-QEITN 85 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~-~~~~~~~~i~~Dl~d~~~~~~~~~~~~-~~~~~ 85 (211)
.++++||+||+|.||..+++.+. ..|++|++++|++.+... ..-+.. . ..|..+.+..+...+... ..+|.
T Consensus 140 ~g~~vlV~Ga~ggiG~~~~~~a~-----~~G~~V~~~~~~~~~~~~~~~~g~~-~-~~~~~~~~~~~~~~~~~~~~~~D~ 212 (327)
T 1qor_A 140 PDEQFLFHAAAGGVGLIACQWAK-----ALGAKLIGTVGTAQKAQSALKAGAW-Q-VINYREEDLVERLKEITGGKKVRV 212 (327)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHH-----HHTCEEEEEESSHHHHHHHHHHTCS-E-EEETTTSCHHHHHHHHTTTCCEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-----HcCCEEEEEeCCHHHHHHHHHcCCC-E-EEECCCccHHHHHHHHhCCCCceE
Confidence 36799999999999999999998 688999999987543110 011222 2 357766543333332211 12799
Q ss_pred EEeecc
Q 028258 86 LFWVPL 91 (211)
Q Consensus 86 v~~~a~ 91 (211)
+|++++
T Consensus 213 vi~~~g 218 (327)
T 1qor_A 213 VYDSVG 218 (327)
T ss_dssp EEECSC
T ss_pred EEECCc
Confidence 999987
|
| >2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* | Back alignment and structure |
|---|
Probab=97.20 E-value=0.00012 Score=61.16 Aligned_cols=74 Identities=12% Similarity=0.016 Sum_probs=48.9
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCc-EEEEEeCCCCCCC-C-CCCCceeEEEeeCCCHHHHHHHHHhc-ccccce
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRPPPGW-F-PTALVDRYITFDALDPTDTALKLSLI-SQEITN 85 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~-~V~~~~R~~~~~~-~-~~~~~~~~i~~Dl~d~~~~~~~~~~~-~~~~~~ 85 (211)
+++||+||+|.||..+++.+. ..|+ +|++++|++.+.. . ..-+.. . .+|..+.+ +.+.+... ...+|+
T Consensus 162 ~~vlI~GasggiG~~~~~~a~-----~~Ga~~Vi~~~~~~~~~~~~~~~~g~~-~-~~d~~~~~-~~~~~~~~~~~~~d~ 233 (357)
T 2zb4_A 162 KTMVVSGAAGACGSVAGQIGH-----FLGCSRVVGICGTHEKCILLTSELGFD-A-AINYKKDN-VAEQLRESCPAGVDV 233 (357)
T ss_dssp CEEEESSTTBHHHHHHHHHHH-----HTTCSEEEEEESCHHHHHHHHHTSCCS-E-EEETTTSC-HHHHHHHHCTTCEEE
T ss_pred cEEEEECCCcHHHHHHHHHHH-----HCCCCeEEEEeCCHHHHHHHHHHcCCc-e-EEecCchH-HHHHHHHhcCCCCCE
Confidence 899999999999999999998 6899 9999998754311 0 011223 2 35776643 22223221 112789
Q ss_pred EEeecc
Q 028258 86 LFWVPL 91 (211)
Q Consensus 86 v~~~a~ 91 (211)
+|++++
T Consensus 234 vi~~~G 239 (357)
T 2zb4_A 234 YFDNVG 239 (357)
T ss_dssp EEESCC
T ss_pred EEECCC
Confidence 999887
|
| >2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A* | Back alignment and structure |
|---|
Probab=97.14 E-value=0.00011 Score=61.01 Aligned_cols=77 Identities=16% Similarity=0.036 Sum_probs=50.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-CC-CCCceeEEEeeCCCHHHHHHHHHhcc-cccc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-FP-TALVDRYITFDALDPTDTALKLSLIS-QEIT 84 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-~~-~~~~~~~i~~Dl~d~~~~~~~~~~~~-~~~~ 84 (211)
.++++||+||+|.||..+++.+. ..|++|++++|++.+.. .. .-+.. . ..|..+.+++.+.+.... ..+|
T Consensus 155 ~g~~vlI~Ga~g~iG~~~~~~a~-----~~G~~V~~~~~~~~~~~~~~~~~g~~-~-~~d~~~~~~~~~~~~~~~~~~~d 227 (345)
T 2j3h_A 155 EGETVYVSAASGAVGQLVGQLAK-----MMGCYVVGSAGSKEKVDLLKTKFGFD-D-AFNYKEESDLTAALKRCFPNGID 227 (345)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHH-----HTTCEEEEEESSHHHHHHHHHTSCCS-E-EEETTSCSCSHHHHHHHCTTCEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHcCCc-e-EEecCCHHHHHHHHHHHhCCCCc
Confidence 35789999999999999999998 68899999998764321 01 11223 2 347765433333333221 1278
Q ss_pred eEEeecc
Q 028258 85 NLFWVPL 91 (211)
Q Consensus 85 ~v~~~a~ 91 (211)
++|++++
T Consensus 228 ~vi~~~g 234 (345)
T 2j3h_A 228 IYFENVG 234 (345)
T ss_dssp EEEESSC
T ss_pred EEEECCC
Confidence 8988876
|
| >1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
Probab=97.14 E-value=0.00047 Score=57.74 Aligned_cols=41 Identities=22% Similarity=0.314 Sum_probs=29.1
Q ss_pred CccccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeC
Q 028258 1 MEKQDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAAR 46 (211)
Q Consensus 1 ~~~~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R 46 (211)
|.+..+ |+.+|.|.||||++|+.+++.|.+ ...++|+++.+
T Consensus 1 m~~~~~-M~~kV~IiGAtG~iG~~llr~L~~----~p~~ev~~i~~ 41 (354)
T 1ys4_A 1 MSKGEK-MKIKVGVLGATGSVGQRFVQLLAD----HPMFELTALAA 41 (354)
T ss_dssp -------CCEEEEEETTTSHHHHHHHHHHTT----CSSEEEEEEEE
T ss_pred CCCccc-ccceEEEECcCCHHHHHHHHHHhc----CCCCEEEEEEc
Confidence 555553 446899999999999999999984 45678888864
|
| >3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=97.12 E-value=0.00031 Score=57.98 Aligned_cols=94 Identities=15% Similarity=0.079 Sum_probs=62.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCc-EEEEEeCCC--CCCC-----CC------CCCceeEEEeeCCCHHHHH
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRP--PPGW-----FP------TALVDRYITFDALDPTDTA 73 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~-~V~~~~R~~--~~~~-----~~------~~~~~~~i~~Dl~d~~~~~ 73 (211)
..++|.|+|| |.+|+.++..|+ ..|+ +|+++++++ .... +. ..... +... .|.
T Consensus 7 ~~~kv~ViGa-G~vG~~ia~~l~-----~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~-i~~t--~d~---- 73 (315)
T 3tl2_A 7 KRKKVSVIGA-GFTGATTAFLLA-----QKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDAN-IIGT--SDY---- 73 (315)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHH-----HTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCC-EEEE--SCG----
T ss_pred CCCEEEEECC-CHHHHHHHHHHH-----hCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCE-EEEc--CCH----
Confidence 3578999996 999999999998 5778 899999973 2110 00 01111 1111 111
Q ss_pred HHHHhcccccceEEeecccCCc---hhHHHHhhcHHHHHHHHHHHHhc
Q 028258 74 LKLSLISQEITNLFWVPLQVQE---SEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 74 ~~~~~~~~~~~~v~~~a~~~~~---~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
+.+++ .|.||.+++.... +..+....|....+.+.+.+.+.
T Consensus 74 ~a~~~----aDvVIiaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~ 117 (315)
T 3tl2_A 74 ADTAD----SDVVVITAGIARKPGMSRDDLVATNSKIMKSITRDIAKH 117 (315)
T ss_dssp GGGTT----CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhCC----CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 12333 6888888876542 44567788999999999999887
|
| >1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} | Back alignment and structure |
|---|
Probab=97.11 E-value=9.6e-05 Score=61.10 Aligned_cols=78 Identities=10% Similarity=-0.011 Sum_probs=50.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-CCCCCceeEEEeeCCCHHHHHHHHHhcc-cccce
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-FPTALVDRYITFDALDPTDTALKLSLIS-QEITN 85 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-~~~~~~~~~i~~Dl~d~~~~~~~~~~~~-~~~~~ 85 (211)
.++++||+||+|.||..+++.+. ..|++|++++|++.+.. ...-+.+ . ..|..+.+..+...+... ..+|.
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~a~-----~~G~~Vi~~~~~~~~~~~~~~~g~~-~-~~d~~~~~~~~~i~~~~~~~~~d~ 217 (333)
T 1wly_A 145 PGDYVLIHAAAGGMGHIMVPWAR-----HLGATVIGTVSTEEKAETARKLGCH-H-TINYSTQDFAEVVREITGGKGVDV 217 (333)
T ss_dssp TTCEEEETTTTSTTHHHHHHHHH-----HTTCEEEEEESSHHHHHHHHHHTCS-E-EEETTTSCHHHHHHHHHTTCCEEE
T ss_pred CCCEEEEECCccHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHcCCC-E-EEECCCHHHHHHHHHHhCCCCCeE
Confidence 35789999999999999999998 68899999999764311 0011222 2 347666433222222111 12799
Q ss_pred EEeeccc
Q 028258 86 LFWVPLQ 92 (211)
Q Consensus 86 v~~~a~~ 92 (211)
+|++++.
T Consensus 218 vi~~~g~ 224 (333)
T 1wly_A 218 VYDSIGK 224 (333)
T ss_dssp EEECSCT
T ss_pred EEECCcH
Confidence 9999874
|
| >2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* | Back alignment and structure |
|---|
Probab=97.11 E-value=0.00013 Score=60.89 Aligned_cols=78 Identities=8% Similarity=-0.120 Sum_probs=50.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCC-CCCCceeEEEeeCCCHHHHHHHHHhcc-cccce
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF-PTALVDRYITFDALDPTDTALKLSLIS-QEITN 85 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~-~~~~~~~~i~~Dl~d~~~~~~~~~~~~-~~~~~ 85 (211)
.++++||+||+|.||..+++.+. ..|++|++++|++.+... ..-+.. ..+|..+.+..+...+... ..+|.
T Consensus 162 ~g~~vlV~Ga~ggiG~~~~~~a~-----~~Ga~Vi~~~~~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~d~ 234 (354)
T 2j8z_A 162 AGDYVLIHAGLSGVGTAAIQLTR-----MAGAIPLVTAGSQKKLQMAEKLGAA--AGFNYKKEDFSEATLKFTKGAGVNL 234 (354)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHTCS--EEEETTTSCHHHHHHHHTTTSCEEE
T ss_pred CCCEEEEECCccHHHHHHHHHHH-----HcCCEEEEEeCCHHHHHHHHHcCCc--EEEecCChHHHHHHHHHhcCCCceE
Confidence 35789999999999999999998 689999999987653210 011222 2356666443333222111 12789
Q ss_pred EEeeccc
Q 028258 86 LFWVPLQ 92 (211)
Q Consensus 86 v~~~a~~ 92 (211)
+|++++.
T Consensus 235 vi~~~G~ 241 (354)
T 2j8z_A 235 ILDCIGG 241 (354)
T ss_dssp EEESSCG
T ss_pred EEECCCc
Confidence 9999874
|
| >4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major} | Back alignment and structure |
|---|
Probab=97.08 E-value=0.00021 Score=59.75 Aligned_cols=101 Identities=11% Similarity=0.091 Sum_probs=62.1
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCC--CCCcEEEEEeCCCCCC-------CCC---CCCceeEEEeeCCCHHHHHHHH
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTP--GSPWKVYGAARRPPPG-------WFP---TALVDRYITFDALDPTDTALKL 76 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~--~~g~~V~~~~R~~~~~-------~~~---~~~~~~~i~~Dl~d~~~~~~~~ 76 (211)
.-+|.|+||+|.||+.++..|.+..-- ..-.++..++..+... .+. .+........ .| ..+++
T Consensus 24 ~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~--~~---~~~a~ 98 (345)
T 4h7p_A 24 AVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVT--AD---PRVAF 98 (345)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEE--SC---HHHHT
T ss_pred CCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEc--CC---hHHHh
Confidence 348999999999999999988731100 1113677777654210 000 1222201111 12 23445
Q ss_pred HhcccccceEEeecccCC---chhHHHHhhcHHHHHHHHHHHHhc
Q 028258 77 SLISQEITNLFWVPLQVQ---ESEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 77 ~~~~~~~~~v~~~a~~~~---~~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
++ .|+|+.+++.+. .+..+..+.|...++.+.+.+.+.
T Consensus 99 ~~----advVvi~aG~prkpGmtR~DLl~~Na~I~~~~~~~i~~~ 139 (345)
T 4h7p_A 99 DG----VAIAIMCGAFPRKAGMERKDLLEMNARIFKEQGEAIAAV 139 (345)
T ss_dssp TT----CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CC----CCEEEECCCCCCCCCCCHHHHHHHhHHHHHHHHHHHHhh
Confidence 55 577888888754 256677899999999999999875
|
| >3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A* | Back alignment and structure |
|---|
Probab=97.07 E-value=0.0008 Score=55.77 Aligned_cols=99 Identities=14% Similarity=0.014 Sum_probs=56.9
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCc--EEEEEeCCCCCCC-----CC-----CCCceeEEEeeCCCHHHHHH
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPW--KVYGAARRPPPGW-----FP-----TALVDRYITFDALDPTDTAL 74 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~--~V~~~~R~~~~~~-----~~-----~~~~~~~i~~Dl~d~~~~~~ 74 (211)
..+++|.|+|| |.+|+.++..|+ ..+. +|.++++++.+.. +. ...+. ....| .+
T Consensus 7 ~~~~kV~ViGa-G~vG~~~a~~l~-----~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~-i~~~~---~~---- 72 (326)
T 3vku_A 7 KDHQKVILVGD-GAVGSSYAYAMV-----LQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKK-IYSAE---YS---- 72 (326)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHH-----HHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCE-EEECC---GG----
T ss_pred CCCCEEEEECC-CHHHHHHHHHHH-----hCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcE-EEECc---HH----
Confidence 34578999996 999999999998 4555 7999998654210 00 12333 33222 11
Q ss_pred HHHhcccccceEEeecccCCc---hhHHHHhhcHHHHHHHHHHHHhcCCCCCCce
Q 028258 75 KLSLISQEITNLFWVPLQVQE---SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLR 126 (211)
Q Consensus 75 ~~~~~~~~~~~v~~~a~~~~~---~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ 126 (211)
.+++ .|.||++++.... +..+....|...++.+.+.+.+. ++...
T Consensus 73 a~~~----aDiVvi~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~---~p~a~ 120 (326)
T 3vku_A 73 DAKD----ADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDS---GFNGI 120 (326)
T ss_dssp GGTT----CSEEEECCCCC----------------CHHHHHHHHHTT---TCCSE
T ss_pred HhcC----CCEEEECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhc---CCceE
Confidence 2343 6888888886532 34456788998889999999887 55443
|
| >3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A* | Back alignment and structure |
|---|
Probab=97.06 E-value=0.00088 Score=57.31 Aligned_cols=72 Identities=15% Similarity=-0.074 Sum_probs=53.7
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-CCCCCceeEEEeeCCCHHHHHHHHHhcccccceEE
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-FPTALVDRYITFDALDPTDTALKLSLISQEITNLF 87 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~ 87 (211)
+.+|+|+| .|-+|+.+++.|. +.|++|+++++++.... ....++. ++.+|.++++.+.++ ++.. .+.|+
T Consensus 4 ~~~viIiG-~Gr~G~~va~~L~-----~~g~~vvvId~d~~~v~~~~~~g~~-vi~GDat~~~~L~~a--gi~~-A~~vi 73 (413)
T 3l9w_A 4 GMRVIIAG-FGRFGQITGRLLL-----SSGVKMVVLDHDPDHIETLRKFGMK-VFYGDATRMDLLESA--GAAK-AEVLI 73 (413)
T ss_dssp CCSEEEEC-CSHHHHHHHHHHH-----HTTCCEEEEECCHHHHHHHHHTTCC-CEESCTTCHHHHHHT--TTTT-CSEEE
T ss_pred CCeEEEEC-CCHHHHHHHHHHH-----HCCCCEEEEECCHHHHHHHHhCCCe-EEEcCCCCHHHHHhc--CCCc-cCEEE
Confidence 35799999 5999999999999 68999999999876421 1235678 899999999877665 2222 56665
Q ss_pred eec
Q 028258 88 WVP 90 (211)
Q Consensus 88 ~~a 90 (211)
.+.
T Consensus 74 v~~ 76 (413)
T 3l9w_A 74 NAI 76 (413)
T ss_dssp ECC
T ss_pred ECC
Confidence 444
|
| >1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A* | Back alignment and structure |
|---|
Probab=97.01 E-value=0.005 Score=51.02 Aligned_cols=102 Identities=11% Similarity=-0.070 Sum_probs=62.6
Q ss_pred CccccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCc-EEEEEeCCCCCCCC-----C------CCCceeEEEeeCCC
Q 028258 1 MEKQDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRPPPGWF-----P------TALVDRYITFDALD 68 (211)
Q Consensus 1 ~~~~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~-~V~~~~R~~~~~~~-----~------~~~~~~~i~~Dl~d 68 (211)
|.+++.-++++|.|+|| |.+|..++..|. ..|+ +|.++++++..... . ....+ +... +|
T Consensus 1 ~~~~~~~~~~kI~VIGa-G~vG~~lA~~la-----~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~-i~~t--~d 71 (331)
T 1pzg_A 1 MAPALVQRRKKVAMIGS-GMIGGTMGYLCA-----LRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVS-VRAE--YS 71 (331)
T ss_dssp --CCCCSCCCEEEEECC-SHHHHHHHHHHH-----HHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCC-EEEE--CS
T ss_pred CCcCcCCCCCEEEEECC-CHHHHHHHHHHH-----hCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCE-EEEe--CC
Confidence 34443333468999997 999999999999 5777 89999988653110 0 01111 1110 23
Q ss_pred HHHHHHHHHhcccccceEEeecccCCc--------hhHHHHhhcHHHHHHHHHHHHhc
Q 028258 69 PTDTALKLSLISQEITNLFWVPLQVQE--------SEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 69 ~~~~~~~~~~~~~~~~~v~~~a~~~~~--------~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
+.+++++ .|.||.+++.... +..+....|....+.+.+.+.+.
T Consensus 72 ---~~ea~~~----aDiVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~ 122 (331)
T 1pzg_A 72 ---YEAALTG----ADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKY 122 (331)
T ss_dssp ---HHHHHTT----CSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHH
T ss_pred ---HHHHhCC----CCEEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 3345665 5778777755431 22344566788888888888877
|
| >3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A* | Back alignment and structure |
|---|
Probab=96.93 E-value=0.00083 Score=55.40 Aligned_cols=73 Identities=10% Similarity=-0.082 Sum_probs=51.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCc-EEEEEeCCCC---CCC-C-----CCCCceeEEEeeCCCHHHHHHHHH
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRPP---PGW-F-----PTALVDRYITFDALDPTDTALKLS 77 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~-~V~~~~R~~~---~~~-~-----~~~~~~~~i~~Dl~d~~~~~~~~~ 77 (211)
.+|+++|+|| |.+|++++..|. ..|. +|++++|++. +.. + ...... +...++.+.+++.+.+.
T Consensus 153 ~gk~~lVlGa-GG~g~aia~~L~-----~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~-~~~~~~~~~~~l~~~l~ 225 (315)
T 3tnl_A 153 IGKKMTICGA-GGAATAICIQAA-----LDGVKEISIFNRKDDFYANAEKTVEKINSKTDCK-AQLFDIEDHEQLRKEIA 225 (315)
T ss_dssp TTSEEEEECC-SHHHHHHHHHHH-----HTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCE-EEEEETTCHHHHHHHHH
T ss_pred cCCEEEEECC-ChHHHHHHHHHH-----HCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCc-eEEeccchHHHHHhhhc
Confidence 4689999996 899999999999 6887 7999999832 210 0 011234 44567877777777666
Q ss_pred hcccccceEEeecc
Q 028258 78 LISQEITNLFWVPL 91 (211)
Q Consensus 78 ~~~~~~~~v~~~a~ 91 (211)
+ .|.||++..
T Consensus 226 ~----aDiIINaTp 235 (315)
T 3tnl_A 226 E----SVIFTNATG 235 (315)
T ss_dssp T----CSEEEECSS
T ss_pred C----CCEEEECcc
Confidence 5 578888764
|
| >3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A | Back alignment and structure |
|---|
Probab=96.92 E-value=0.0057 Score=51.41 Aligned_cols=64 Identities=16% Similarity=0.005 Sum_probs=49.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
++++|+|+| +|.+|+.+++.+. +.|++|++++..+.... ..-.-+ ++..|+.|.+.+.+.++..
T Consensus 11 ~~~~IlIlG-~G~lg~~la~aa~-----~lG~~viv~d~~~~~p~-~~~ad~-~~~~~~~d~~~l~~~~~~~ 74 (377)
T 3orq_A 11 FGATIGIIG-GGQLGKMMAQSAQ-----KMGYKVVVLDPSEDCPC-RYVAHE-FIQAKYDDEKALNQLGQKC 74 (377)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHH-----HTTCEEEEEESCTTCTT-GGGSSE-EEECCTTCHHHHHHHHHHC
T ss_pred CCCEEEEEC-CCHHHHHHHHHHH-----HCCCEEEEEECCCCChh-hhhCCE-EEECCCCCHHHHHHHHHhC
Confidence 468899998 7889999999999 68999999988665321 111224 6778999999888887763
|
| >3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A* | Back alignment and structure |
|---|
Probab=96.91 E-value=0.0064 Score=51.18 Aligned_cols=71 Identities=18% Similarity=0.014 Sum_probs=50.1
Q ss_pred CccccCC--CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 1 MEKQDQN--PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 1 ~~~~~~~--~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
|.+|+.+ .+|+|+|+| +|.+|+.+++.+. +.|++|++++..+..... .-.-. .+..|+.|.+.+.+.++.
T Consensus 4 ~~~m~~~~~~~k~IlIlG-~G~~g~~la~aa~-----~~G~~vi~~d~~~~~~~~-~~ad~-~~~~~~~d~~~l~~~~~~ 75 (389)
T 3q2o_A 4 MLDMTRIILPGKTIGIIG-GGQLGRMMALAAK-----EMGYKIAVLDPTKNSPCA-QVADI-EIVASYDDLKAIQHLAEI 75 (389)
T ss_dssp ---CCCCCCTTSEEEEEC-CSHHHHHHHHHHH-----HTTCEEEEEESSTTCTTT-TTCSE-EEECCTTCHHHHHHHHHT
T ss_pred cccccccCCCCCEEEEEC-CCHHHHHHHHHHH-----HcCCEEEEEeCCCCCchH-HhCCc-eEecCcCCHHHHHHHHHh
Confidence 3444432 467999998 7889999999999 699999999876543211 11123 566899999888888776
Q ss_pred c
Q 028258 79 I 79 (211)
Q Consensus 79 ~ 79 (211)
.
T Consensus 76 ~ 76 (389)
T 3q2o_A 76 S 76 (389)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A* | Back alignment and structure |
|---|
Probab=96.90 E-value=0.0013 Score=50.47 Aligned_cols=34 Identities=26% Similarity=0.255 Sum_probs=30.9
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
+|+|+||+|.+|+++++.|+ +.|++|++++|++.
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~-----~~g~~V~~~~r~~~ 35 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLA-----TLGHEIVVGSRREE 35 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHH-----TTTCEEEEEESSHH
T ss_pred eEEEEcCCCHHHHHHHHHHH-----HCCCEEEEEeCCHH
Confidence 58999999999999999999 68899999999754
|
| >2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A | Back alignment and structure |
|---|
Probab=96.84 E-value=0.001 Score=55.72 Aligned_cols=35 Identities=11% Similarity=0.185 Sum_probs=27.8
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCC-----CcEEEEEeCC
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGS-----PWKVYGAARR 47 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~-----g~~V~~~~R~ 47 (211)
+.+|+|.||||++|+.|++.|++ .. .++|+.+.++
T Consensus 9 m~kVaIvGATG~vG~~llr~L~~----~~~~~~~~~ei~~l~s~ 48 (352)
T 2nqt_A 9 ATKVAVAGASGYAGGEILRLLLG----HPAYADGRLRIGALTAA 48 (352)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHT----CHHHHTTSEEEEEEEES
T ss_pred CCEEEEECCCCHHHHHHHHHHHc----CCCCCCccEEEEEEECC
Confidence 36899999999999999999994 33 3577777643
|
| >4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=96.81 E-value=0.003 Score=50.97 Aligned_cols=36 Identities=25% Similarity=0.247 Sum_probs=29.6
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEE-EeCCCC
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYG-AARRPP 49 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~-~~R~~~ 49 (211)
.+|.|+||+|.+|+.+++.+.+ ..++++.+ ++|+.+
T Consensus 8 ikV~V~Ga~G~MG~~i~~~l~~----~~~~eLv~~~d~~~~ 44 (272)
T 4f3y_A 8 MKIAIAGASGRMGRMLIEAVLA----APDATLVGALDRTGS 44 (272)
T ss_dssp EEEEESSTTSHHHHHHHHHHHH----CTTEEEEEEBCCTTC
T ss_pred cEEEEECCCCHHHHHHHHHHHh----CCCCEEEEEEEecCc
Confidence 5799999999999999999985 57888776 566543
|
| >4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=96.80 E-value=0.00034 Score=58.31 Aligned_cols=78 Identities=13% Similarity=-0.051 Sum_probs=49.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCC-CCCCceeEEEeeCCCHHHHHHHHHhcccccceE
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF-PTALVDRYITFDALDPTDTALKLSLISQEITNL 86 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~-~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v 86 (211)
.++++||+||+|.||..+++.+. ..|.+|++++|++.+... ..-+.. . ..|..+.+..+...+.....+|++
T Consensus 167 ~g~~VlV~Gg~g~iG~~~~~~a~-----~~Ga~Vi~~~~~~~~~~~~~~lGa~-~-~~~~~~~~~~~~~~~~~~~g~Dvv 239 (353)
T 4dup_A 167 EGESVLIHGGTSGIGTTAIQLAR-----AFGAEVYATAGSTGKCEACERLGAK-R-GINYRSEDFAAVIKAETGQGVDII 239 (353)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHH-----HTTCEEEEEESSHHHHHHHHHHTCS-E-EEETTTSCHHHHHHHHHSSCEEEE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHH-----HcCCEEEEEeCCHHHHHHHHhcCCC-E-EEeCCchHHHHHHHHHhCCCceEE
Confidence 35789999999999999999998 689999999987654210 111222 2 245555432222111111128999
Q ss_pred Eeeccc
Q 028258 87 FWVPLQ 92 (211)
Q Consensus 87 ~~~a~~ 92 (211)
|.+++.
T Consensus 240 id~~g~ 245 (353)
T 4dup_A 240 LDMIGA 245 (353)
T ss_dssp EESCCG
T ss_pred EECCCH
Confidence 988874
|
| >1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=96.77 E-value=0.013 Score=48.26 Aligned_cols=92 Identities=14% Similarity=-0.004 Sum_probs=57.7
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCc--EEEEEeCCCCCCC-----CCC-----CCceeEEEeeCCCHHHHHHHH
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPW--KVYGAARRPPPGW-----FPT-----ALVDRYITFDALDPTDTALKL 76 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~--~V~~~~R~~~~~~-----~~~-----~~~~~~i~~Dl~d~~~~~~~~ 76 (211)
+.+|.|+|| |.+|..++..|+ ..+. +|.+++.++.+.. +.+ ..++ +. . .+. +++
T Consensus 7 ~~KI~IiGa-G~vG~~~a~~l~-----~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~-i~-~--~~~----~a~ 72 (318)
T 1y6j_A 7 RSKVAIIGA-GFVGASAAFTMA-----LRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMS-LY-A--GDY----SDV 72 (318)
T ss_dssp CCCEEEECC-SHHHHHHHHHHH-----HTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEE-EC-----CG----GGG
T ss_pred CCEEEEECC-CHHHHHHHHHHH-----hCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeE-EE-E--CCH----HHh
Confidence 357999997 999999999998 4555 8999998765421 011 1222 11 1 222 224
Q ss_pred HhcccccceEEeecccCCc---hhHHHHhhcHHHHHHHHHHHHhc
Q 028258 77 SLISQEITNLFWVPLQVQE---SEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 77 ~~~~~~~~~v~~~a~~~~~---~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
++ .|+|+.+++.... +..+....|...+..+.+.+.+.
T Consensus 73 ~~----aDvVii~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~ 113 (318)
T 1y6j_A 73 KD----CDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKY 113 (318)
T ss_dssp TT----CSEEEECCCC------CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CC----CCEEEEcCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHh
Confidence 44 6788888876432 23355677888888999999887
|
| >1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A | Back alignment and structure |
|---|
Probab=96.76 E-value=0.0016 Score=54.58 Aligned_cols=36 Identities=17% Similarity=0.242 Sum_probs=29.5
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCC
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~ 48 (211)
+.+|.|.||+|++|+.+++.|.+ ...++++++.++.
T Consensus 16 ~~kV~IiGAtG~iG~~llr~L~~----~p~~elvai~~~~ 51 (359)
T 1xyg_A 16 DIRIGLLGASGYTGAEIVRLLAN----HPHFQVTLMTADR 51 (359)
T ss_dssp CEEEEEECCSSHHHHHHHHHHHT----CSSEEEEEEBCST
T ss_pred CcEEEEECcCCHHHHHHHHHHHc----CCCcEEEEEeCch
Confidence 45899999999999999999995 4556888876543
|
| >1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* | Back alignment and structure |
|---|
Probab=96.76 E-value=0.00039 Score=57.78 Aligned_cols=78 Identities=17% Similarity=0.123 Sum_probs=49.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCC-CcEEEEEeCCCCCCCC-CCCCceeEEEeeCCCHHHHHHHHHhcc-cccc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGS-PWKVYGAARRPPPGWF-PTALVDRYITFDALDPTDTALKLSLIS-QEIT 84 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~-g~~V~~~~R~~~~~~~-~~~~~~~~i~~Dl~d~~~~~~~~~~~~-~~~~ 84 (211)
.++++||+||+|.||..+++.+. .. |++|++++|++.+... ..-+.. . ..|..+.+..++..+... ..+|
T Consensus 170 ~g~~vlV~Gagg~iG~~~~~~a~-----~~~Ga~Vi~~~~~~~~~~~~~~~g~~-~-~~~~~~~~~~~~~~~~~~~~~~d 242 (347)
T 1jvb_A 170 PTKTLLVVGAGGGLGTMAVQIAK-----AVSGATIIGVDVREEAVEAAKRAGAD-Y-VINASMQDPLAEIRRITESKGVD 242 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHH-----HHTCCEEEEEESSHHHHHHHHHHTCS-E-EEETTTSCHHHHHHHHTTTSCEE
T ss_pred CCCEEEEECCCccHHHHHHHHHH-----HcCCCeEEEEcCCHHHHHHHHHhCCC-E-EecCCCccHHHHHHHHhcCCCce
Confidence 35789999999999999999988 57 8999999987653210 111222 2 346665433222211111 1288
Q ss_pred eEEeeccc
Q 028258 85 NLFWVPLQ 92 (211)
Q Consensus 85 ~v~~~a~~ 92 (211)
.+|++++.
T Consensus 243 ~vi~~~g~ 250 (347)
T 1jvb_A 243 AVIDLNNS 250 (347)
T ss_dssp EEEESCCC
T ss_pred EEEECCCC
Confidence 99988864
|
| >3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* | Back alignment and structure |
|---|
Probab=96.75 E-value=0.0005 Score=56.74 Aligned_cols=78 Identities=14% Similarity=0.025 Sum_probs=49.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCC-CCCCceeEEEeeCCCHHHHHHHHHhcc-cccce
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF-PTALVDRYITFDALDPTDTALKLSLIS-QEITN 85 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~-~~~~~~~~i~~Dl~d~~~~~~~~~~~~-~~~~~ 85 (211)
.++++||+||+|.+|...++.+. ..|.+|++++|++.+... ..-+.. ...|..+.+..+...+... ..+|+
T Consensus 148 ~g~~vlV~Ga~g~iG~~~~~~a~-----~~Ga~Vi~~~~~~~~~~~~~~~ga~--~~~~~~~~~~~~~~~~~~~~~g~D~ 220 (334)
T 3qwb_A 148 KGDYVLLFAAAGGVGLILNQLLK-----MKGAHTIAVASTDEKLKIAKEYGAE--YLINASKEDILRQVLKFTNGKGVDA 220 (334)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHH-----HTTCEEEEEESSHHHHHHHHHTTCS--EEEETTTSCHHHHHHHHTTTSCEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHcCCc--EEEeCCCchHHHHHHHHhCCCCceE
Confidence 36789999999999999999888 689999999987653210 111222 2345555432222222111 12789
Q ss_pred EEeeccc
Q 028258 86 LFWVPLQ 92 (211)
Q Consensus 86 v~~~a~~ 92 (211)
+|.+++.
T Consensus 221 vid~~g~ 227 (334)
T 3qwb_A 221 SFDSVGK 227 (334)
T ss_dssp EEECCGG
T ss_pred EEECCCh
Confidence 9988874
|
| >2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=96.75 E-value=0.0016 Score=54.30 Aligned_cols=36 Identities=19% Similarity=0.218 Sum_probs=29.3
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCC
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~ 48 (211)
+.+|.|.||||++|+.+++.|.+ ....+++.+.++.
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~----~p~~elv~v~s~~ 39 (345)
T 2ozp_A 4 KKTLSIVGASGYAGGEFLRLALS----HPYLEVKQVTSRR 39 (345)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHT----CTTEEEEEEBCST
T ss_pred CCEEEEECCCCHHHHHHHHHHHc----CCCcEEEEEECch
Confidence 36799999999999999999985 4556888776643
|
| >2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=96.75 E-value=0.00043 Score=57.43 Aligned_cols=76 Identities=11% Similarity=-0.023 Sum_probs=50.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-CCCCCceeEEEeeCCCHHHHHHHHHhcc--cccc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-FPTALVDRYITFDALDPTDTALKLSLIS--QEIT 84 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-~~~~~~~~~i~~Dl~d~~~~~~~~~~~~--~~~~ 84 (211)
.++++||+||+|.+|..+++.+. ..|++|++++|++.+.. ...-+.. . ..|..+.+ +.+.+.... ..+|
T Consensus 166 ~g~~vlV~Gasg~iG~~~~~~a~-----~~G~~Vi~~~~~~~~~~~~~~~ga~-~-~~d~~~~~-~~~~~~~~~~~~~~d 237 (343)
T 2eih_A 166 PGDDVLVMAAGSGVSVAAIQIAK-----LFGARVIATAGSEDKLRRAKALGAD-E-TVNYTHPD-WPKEVRRLTGGKGAD 237 (343)
T ss_dssp TTCEEEECSTTSTTHHHHHHHHH-----HTTCEEEEEESSHHHHHHHHHHTCS-E-EEETTSTT-HHHHHHHHTTTTCEE
T ss_pred CCCEEEEECCCchHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHhcCCC-E-EEcCCccc-HHHHHHHHhCCCCce
Confidence 35789999999999999999998 68899999998765321 0111233 2 25776643 223332211 1279
Q ss_pred eEEeecc
Q 028258 85 NLFWVPL 91 (211)
Q Consensus 85 ~v~~~a~ 91 (211)
.+|++++
T Consensus 238 ~vi~~~g 244 (343)
T 2eih_A 238 KVVDHTG 244 (343)
T ss_dssp EEEESSC
T ss_pred EEEECCC
Confidence 9999987
|
| >1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A | Back alignment and structure |
|---|
Probab=96.74 E-value=0.0017 Score=53.71 Aligned_cols=70 Identities=14% Similarity=0.016 Sum_probs=52.5
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHH-HHhcccccceEE
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALK-LSLISQEITNLF 87 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~-~~~~~~~~~~v~ 87 (211)
+++++|.|+ |.+|+.+++.|. +.|+ |++++++++.......++. ++.+|.+|++.+.++ +++ .+.++
T Consensus 115 ~~~viI~G~-G~~g~~l~~~L~-----~~g~-v~vid~~~~~~~~~~~~~~-~i~gd~~~~~~L~~a~i~~----a~~vi 182 (336)
T 1lnq_A 115 SRHVVICGW-SESTLECLRELR-----GSEV-FVLAEDENVRKKVLRSGAN-FVHGDPTRVSDLEKANVRG----ARAVI 182 (336)
T ss_dssp -CEEEEESC-CHHHHHHHTTGG-----GSCE-EEEESCGGGHHHHHHTTCE-EEESCTTSHHHHHHTCSTT----EEEEE
T ss_pred cCCEEEECC-cHHHHHHHHHHH-----hCCc-EEEEeCChhhhhHHhCCcE-EEEeCCCCHHHHHhcChhh----ccEEE
Confidence 458999995 999999999999 6889 9999988764222236788 999999999887765 333 45555
Q ss_pred eec
Q 028258 88 WVP 90 (211)
Q Consensus 88 ~~a 90 (211)
.+.
T Consensus 183 ~~~ 185 (336)
T 1lnq_A 183 VDL 185 (336)
T ss_dssp ECC
T ss_pred EcC
Confidence 443
|
| >1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A* | Back alignment and structure |
|---|
Probab=96.72 E-value=0.0084 Score=50.23 Aligned_cols=75 Identities=12% Similarity=0.019 Sum_probs=53.1
Q ss_pred cccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccc
Q 028258 3 KQDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQE 82 (211)
Q Consensus 3 ~~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~ 82 (211)
||.. ++++|||+|+ |.+|+.+++.+. +.|++|++++..+.... ....-+ .+..|..|.+.+.+.++...
T Consensus 6 pm~~-~~~~ili~g~-g~~~~~~~~a~~-----~~G~~v~~~~~~~~~~~-~~~~d~-~~~~~~~d~~~l~~~~~~~~-- 74 (391)
T 1kjq_A 6 ALRP-AATRVMLLGS-GELGKEVAIECQ-----RLGVEVIAVDRYADAPA-MHVAHR-SHVINMLDGDALRRVVELEK-- 74 (391)
T ss_dssp TTST-TCCEEEEESC-SHHHHHHHHHHH-----TTTCEEEEEESSTTCGG-GGGSSE-EEECCTTCHHHHHHHHHHHC--
T ss_pred CCCC-CCCEEEEECC-CHHHHHHHHHHH-----HcCCEEEEEECCCCCch-hhhccc-eEECCCCCHHHHHHHHHHcC--
Confidence 5554 3578999985 789999999999 68999999987654321 011124 66788889888877776543
Q ss_pred cceEEe
Q 028258 83 ITNLFW 88 (211)
Q Consensus 83 ~~~v~~ 88 (211)
+|.|+.
T Consensus 75 ~d~v~~ 80 (391)
T 1kjq_A 75 PHYIVP 80 (391)
T ss_dssp CSEEEE
T ss_pred CCEEEE
Confidence 677754
|
| >3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A* | Back alignment and structure |
|---|
Probab=96.72 E-value=0.0053 Score=50.51 Aligned_cols=95 Identities=14% Similarity=0.052 Sum_probs=60.8
Q ss_pred CCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCC--cEEEEEeCCCCCCC-----------CCCCCceeEEEeeCCCHHHH
Q 028258 6 QNPKSVALIIGVTGISGLSLAEALKNPTTPGSP--WKVYGAARRPPPGW-----------FPTALVDRYITFDALDPTDT 72 (211)
Q Consensus 6 ~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g--~~V~~~~R~~~~~~-----------~~~~~~~~~i~~Dl~d~~~~ 72 (211)
+|++.+|.|+|| |.+|..++..|+ ..+ .+|.++++++.+.. +....++ +. .| +.
T Consensus 3 ~m~~~KI~IIGa-G~vG~~la~~l~-----~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~-v~-~~--~~--- 69 (317)
T 3d0o_A 3 KFKGNKVVLIGN-GAVGSSYAFSLV-----NQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVR-VK-AG--EY--- 69 (317)
T ss_dssp -CCCCEEEEECC-SHHHHHHHHHHH-----HHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCE-EE-EC--CG---
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHH-----hCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeE-EE-eC--CH---
Confidence 344568999998 999999999998 345 47888887653210 0012223 22 22 22
Q ss_pred HHHHHhcccccceEEeecccCCc---hhHHHHhhcHHHHHHHHHHHHhc
Q 028258 73 ALKLSLISQEITNLFWVPLQVQE---SEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 73 ~~~~~~~~~~~~~v~~~a~~~~~---~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
+++++ .|+|+.+++.... +..+....|...++.+.+.+.+.
T Consensus 70 -~a~~~----aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~ 113 (317)
T 3d0o_A 70 -SDCHD----ADLVVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMAS 113 (317)
T ss_dssp -GGGTT----CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred -HHhCC----CCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence 22444 5788888876432 23455677888888899888887
|
| >1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A* | Back alignment and structure |
|---|
Probab=96.72 E-value=0.00078 Score=54.43 Aligned_cols=35 Identities=20% Similarity=0.085 Sum_probs=28.3
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEE-EeCCC
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYG-AARRP 48 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~-~~R~~ 48 (211)
.+|.|+|++|.+|+.+++.+.+ ..++++.+ ++|++
T Consensus 6 mkV~V~Ga~G~mG~~~~~~~~~----~~~~elva~~d~~~ 41 (273)
T 1dih_A 6 IRVAIAGAGGRMGRQLIQAALA----LEGVQLGAALEREG 41 (273)
T ss_dssp EEEEETTTTSHHHHHHHHHHHH----STTEECCCEECCTT
T ss_pred cEEEEECCCCHHHHHHHHHHHh----CCCCEEEEEEecCc
Confidence 4799999999999999999874 57888774 45543
|
| >3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} | Back alignment and structure |
|---|
Probab=96.71 E-value=0.00076 Score=55.82 Aligned_cols=78 Identities=10% Similarity=-0.042 Sum_probs=49.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCC-CCCCceeEEEeeCCCHHHHHHHHHhcc-cccce
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF-PTALVDRYITFDALDPTDTALKLSLIS-QEITN 85 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~-~~~~~~~~i~~Dl~d~~~~~~~~~~~~-~~~~~ 85 (211)
.+++|||+||+|.||...++.+. ..|.+|+++++++.+... ..-+.. . ..|..+.+..+...+... ..+|+
T Consensus 144 ~g~~VlV~Ga~g~iG~~~~~~a~-----~~Ga~Vi~~~~~~~~~~~~~~lga~-~-~~~~~~~~~~~~~~~~~~~~g~Dv 216 (340)
T 3gms_A 144 RNDVLLVNACGSAIGHLFAQLSQ-----ILNFRLIAVTRNNKHTEELLRLGAA-Y-VIDTSTAPLYETVMELTNGIGADA 216 (340)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHH-----HHTCEEEEEESSSTTHHHHHHHTCS-E-EEETTTSCHHHHHHHHTTTSCEEE
T ss_pred CCCEEEEeCCccHHHHHHHHHHH-----HcCCEEEEEeCCHHHHHHHHhCCCc-E-EEeCCcccHHHHHHHHhCCCCCcE
Confidence 35799999999999999998887 688999999998765211 111222 2 345555432222222111 12789
Q ss_pred EEeeccc
Q 028258 86 LFWVPLQ 92 (211)
Q Consensus 86 v~~~a~~ 92 (211)
+|.+++.
T Consensus 217 vid~~g~ 223 (340)
T 3gms_A 217 AIDSIGG 223 (340)
T ss_dssp EEESSCH
T ss_pred EEECCCC
Confidence 9888863
|
| >2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1 | Back alignment and structure |
|---|
Probab=96.64 E-value=0.0026 Score=52.96 Aligned_cols=36 Identities=19% Similarity=0.147 Sum_probs=26.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEe
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAA 45 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~ 45 (211)
|+.+|+|.||||++|+.+++.|.+.. ....+++.+.
T Consensus 5 m~~kV~IiGAtG~iG~~llr~L~~~~--~~~~elv~i~ 40 (340)
T 2hjs_A 5 QPLNVAVVGATGSVGEALVGLLDERD--FPLHRLHLLA 40 (340)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHTT--CCCSCEEEEE
T ss_pred CCcEEEEECCCCHHHHHHHHHHHhCC--CCcEEEEEEe
Confidence 34579999999999999999998200 2345566664
|
| >2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* | Back alignment and structure |
|---|
Probab=96.63 E-value=0.00054 Score=57.36 Aligned_cols=76 Identities=11% Similarity=0.037 Sum_probs=48.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-CCCCCceeEEEeeCCCHHHHHHHHHhc-ccccce
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-FPTALVDRYITFDALDPTDTALKLSLI-SQEITN 85 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-~~~~~~~~~i~~Dl~d~~~~~~~~~~~-~~~~~~ 85 (211)
.++++||+||+|.+|..+++.+. ..|++|++++|++.+.. ...-+.. . ..|..+.+ +.+.+... ...+|+
T Consensus 163 ~g~~VlV~Ga~G~iG~~~~q~a~-----~~Ga~Vi~~~~~~~~~~~~~~~Ga~-~-~~~~~~~~-~~~~~~~~~~~g~D~ 234 (362)
T 2c0c_A 163 EGKKVLVTAAAGGTGQFAMQLSK-----KAKCHVIGTCSSDEKSAFLKSLGCD-R-PINYKTEP-VGTVLKQEYPEGVDV 234 (362)
T ss_dssp TTCEEEETTTTBTTHHHHHHHHH-----HTTCEEEEEESSHHHHHHHHHTTCS-E-EEETTTSC-HHHHHHHHCTTCEEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHH-----hCCCEEEEEECCHHHHHHHHHcCCc-E-EEecCChh-HHHHHHHhcCCCCCE
Confidence 35789999999999999999988 68899999998754311 0111223 2 23554432 33333322 112789
Q ss_pred EEeecc
Q 028258 86 LFWVPL 91 (211)
Q Consensus 86 v~~~a~ 91 (211)
+|.+++
T Consensus 235 vid~~g 240 (362)
T 2c0c_A 235 VYESVG 240 (362)
T ss_dssp EEECSC
T ss_pred EEECCC
Confidence 998886
|
| >3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A* | Back alignment and structure |
|---|
Probab=96.63 E-value=0.0038 Score=51.38 Aligned_cols=103 Identities=17% Similarity=0.109 Sum_probs=64.5
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC-C---CCCCC--CceeEEEeeCCCHHHHHHHHHhcccccc
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP-G---WFPTA--LVDRYITFDALDPTDTALKLSLISQEIT 84 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~-~---~~~~~--~~~~~i~~Dl~d~~~~~~~~~~~~~~~~ 84 (211)
+|.|+||+|.+|+.++..|.+.. .-..++.++++.+.. . .+.+. ..+ +...--++ ..+.+++ .|
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~--~~~~el~L~Di~~~~~G~a~Dl~~~~~~~~-v~~~~~~~---~~~~~~~----aD 71 (312)
T 3hhp_A 2 KVAVLGAAGGIGQALALLLKTQL--PSGSELSLYDIAPVTPGVAVDLSHIPTAVK-IKGFSGED---ATPALEG----AD 71 (312)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHS--CTTEEEEEECSSTTHHHHHHHHHTSCSSEE-EEEECSSC---CHHHHTT----CS
T ss_pred EEEEECCCCHHHHHHHHHHHhCC--CCCceEEEEecCCCchhHHHHhhCCCCCce-EEEecCCC---cHHHhCC----CC
Confidence 68999999999999999987300 012578889887611 0 01111 122 21110011 2234565 57
Q ss_pred eEEeecccCCc---hhHHHHhhcHHHHHHHHHHHHhcCCCCCCce
Q 028258 85 NLFWVPLQVQE---SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLR 126 (211)
Q Consensus 85 ~v~~~a~~~~~---~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ 126 (211)
+|+.+++.+.. +..+....|...++.+.+.+.+. ++...
T Consensus 72 ivii~ag~~rkpG~~R~dll~~N~~I~~~i~~~i~~~---~p~a~ 113 (312)
T 3hhp_A 72 VVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKT---CPKAC 113 (312)
T ss_dssp EEEECCSCSCCTTCCHHHHHHHHHHHHHHHHHHHHHH---CTTSE
T ss_pred EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH---CCCcE
Confidence 88888877542 45667888999999999999887 55443
|
| >3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A* | Back alignment and structure |
|---|
Probab=96.62 E-value=0.0051 Score=50.87 Aligned_cols=94 Identities=12% Similarity=-0.027 Sum_probs=61.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCc-EEEEEeCCCCCCC-----CCC------CCceeEEEeeCCCHHHHHHH
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRPPPGW-----FPT------ALVDRYITFDALDPTDTALK 75 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~-~V~~~~R~~~~~~-----~~~------~~~~~~i~~Dl~d~~~~~~~ 75 (211)
.+++|.|+|| |.+|..++..|+ ..++ +|.++++++.+.. +.+ ...+ +... .|. ++
T Consensus 6 ~~~kI~viGa-G~vG~~~a~~l~-----~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~-v~~t--~d~----~a 72 (324)
T 3gvi_A 6 ARNKIALIGS-GMIGGTLAHLAG-----LKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAK-FTGA--NDY----AA 72 (324)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHH-----HTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCC-EEEE--SSG----GG
T ss_pred cCCEEEEECC-CHHHHHHHHHHH-----hCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCE-EEEe--CCH----HH
Confidence 3468999997 999999999998 4666 8999999775421 000 1222 2211 121 23
Q ss_pred HHhcccccceEEeecccCCc---hhHHHHhhcHHHHHHHHHHHHhc
Q 028258 76 LSLISQEITNLFWVPLQVQE---SEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 76 ~~~~~~~~~~v~~~a~~~~~---~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
+++ .|+||.+++.... +..+....|....+.+.+.+.+.
T Consensus 73 ~~~----aDiVIiaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~ 114 (324)
T 3gvi_A 73 IEG----ADVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKY 114 (324)
T ss_dssp GTT----CSEEEECCSCCCC-----CHHHHHHHHHHHHHHHHHHHH
T ss_pred HCC----CCEEEEccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHH
Confidence 444 5788888876432 23356677998889999999887
|
| >4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ... | Back alignment and structure |
|---|
Probab=96.62 E-value=0.0057 Score=50.69 Aligned_cols=95 Identities=13% Similarity=0.055 Sum_probs=62.8
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCc--EEEEEeCCCCCCC-----CC-----CCCceeEEEeeCCCHHHHHH
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPW--KVYGAARRPPPGW-----FP-----TALVDRYITFDALDPTDTAL 74 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~--~V~~~~R~~~~~~-----~~-----~~~~~~~i~~Dl~d~~~~~~ 74 (211)
...++|.|+|| |.+|+.++..|+ ..|. +|.+++++..+.. +. ..... .+.. .|.+
T Consensus 17 ~~~~kV~ViGa-G~vG~~~a~~l~-----~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~-i~~~--~d~~---- 83 (331)
T 4aj2_A 17 VPQNKITVVGV-GAVGMACAISIL-----MKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPK-IVSS--KDYS---- 83 (331)
T ss_dssp CCSSEEEEECC-SHHHHHHHHHHH-----HTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCE-EEEC--SSGG----
T ss_pred CCCCEEEEECC-CHHHHHHHHHHH-----hCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCe-EEEc--CCHH----
Confidence 34578999997 999999999998 4565 7999988654210 00 01112 2221 1222
Q ss_pred HHHhcccccceEEeecccCCc---hhHHHHhhcHHHHHHHHHHHHhc
Q 028258 75 KLSLISQEITNLFWVPLQVQE---SEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 75 ~~~~~~~~~~~v~~~a~~~~~---~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
.+++ .|.||.+++.... +..+....|...++.+.+.+.+.
T Consensus 84 ~~~~----aDiVvi~aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~ 126 (331)
T 4aj2_A 84 VTAN----SKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKY 126 (331)
T ss_dssp GGTT----EEEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHH
T ss_pred HhCC----CCEEEEccCCCCCCCccHHHHHHHHHHHHHHHHHHHHHH
Confidence 2444 5788888876542 45567788999999999999887
|
| >3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis} | Back alignment and structure |
|---|
Probab=96.61 E-value=0.0066 Score=50.08 Aligned_cols=93 Identities=12% Similarity=-0.074 Sum_probs=62.1
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCc-EEEEEeCCCCCCC-----CCC------CCceeEEEeeCCCHHHHHHHH
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRPPPGW-----FPT------ALVDRYITFDALDPTDTALKL 76 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~-~V~~~~R~~~~~~-----~~~------~~~~~~i~~Dl~d~~~~~~~~ 76 (211)
.++|.|+| +|.+|..++..|+ ..+. +|.++++++.+.. +.+ ...+ +... .|. +++
T Consensus 5 ~~kI~iiG-aG~vG~~~a~~l~-----~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~-v~~t--~d~----~a~ 71 (321)
T 3p7m_A 5 RKKITLVG-AGNIGGTLAHLAL-----IKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFK-VRGT--NDY----KDL 71 (321)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHH-----HTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCC-EEEE--SCG----GGG
T ss_pred CCEEEEEC-CCHHHHHHHHHHH-----hCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcE-EEEc--CCH----HHH
Confidence 46799999 5999999999998 4555 8999998775410 011 1223 2211 122 234
Q ss_pred HhcccccceEEeecccCCc---hhHHHHhhcHHHHHHHHHHHHhc
Q 028258 77 SLISQEITNLFWVPLQVQE---SEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 77 ~~~~~~~~~v~~~a~~~~~---~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
++ .|+||.+++.... +..+....|...++.+.+.+.+.
T Consensus 72 ~~----aDvVIi~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~ 112 (321)
T 3p7m_A 72 EN----SDVVIVTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHN 112 (321)
T ss_dssp TT----CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CC----CCEEEEcCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHHH
Confidence 44 5788888876532 34456778999999999999887
|
| >3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* | Back alignment and structure |
|---|
Probab=96.60 E-value=0.00045 Score=56.83 Aligned_cols=78 Identities=17% Similarity=0.045 Sum_probs=49.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCC-CCCCceeEEEeeCCCHHHHHHHHHhcc-cccce
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF-PTALVDRYITFDALDPTDTALKLSLIS-QEITN 85 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~-~~~~~~~~i~~Dl~d~~~~~~~~~~~~-~~~~~ 85 (211)
.++++||+||+|.+|...++.+. ..|.+|++++|++.+... ..-+.. ...|..+.+..+...+... ..+|+
T Consensus 140 ~g~~VlV~Ga~g~iG~~~~~~a~-----~~Ga~Vi~~~~~~~~~~~~~~~Ga~--~~~~~~~~~~~~~~~~~~~~~g~Dv 212 (325)
T 3jyn_A 140 PGEIILFHAAAGGVGSLACQWAK-----ALGAKLIGTVSSPEKAAHAKALGAW--ETIDYSHEDVAKRVLELTDGKKCPV 212 (325)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHH-----HHTCEEEEEESSHHHHHHHHHHTCS--EEEETTTSCHHHHHHHHTTTCCEEE
T ss_pred CCCEEEEEcCCcHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHcCCC--EEEeCCCccHHHHHHHHhCCCCceE
Confidence 36789999999999999999988 688999999987653210 111222 2345555432222222111 12789
Q ss_pred EEeeccc
Q 028258 86 LFWVPLQ 92 (211)
Q Consensus 86 v~~~a~~ 92 (211)
+|.+++.
T Consensus 213 vid~~g~ 219 (325)
T 3jyn_A 213 VYDGVGQ 219 (325)
T ss_dssp EEESSCG
T ss_pred EEECCCh
Confidence 9988874
|
| >3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A* | Back alignment and structure |
|---|
Probab=96.58 E-value=0.0062 Score=51.69 Aligned_cols=65 Identities=12% Similarity=-0.078 Sum_probs=49.0
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCC-CCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFP-TALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~-~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
|++++|+|+| +|.+|+.+++.+. +.|++|++++ .+...... ..... .+..|..|.+.+.+.++.+
T Consensus 22 m~~~~I~ilG-gG~lg~~l~~aa~-----~lG~~v~~~d-~~~~p~~~~ad~~~-~~~~~~~d~~~l~~~a~~~ 87 (403)
T 3k5i_A 22 WNSRKVGVLG-GGQLGRMLVESAN-----RLNIQVNVLD-ADNSPAKQISAHDG-HVTGSFKEREAVRQLAKTC 87 (403)
T ss_dssp CSCCEEEEEC-CSHHHHHHHHHHH-----HHTCEEEEEE-STTCTTGGGCCSSC-CEESCTTCHHHHHHHHTTC
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHH-----HCCCEEEEEE-CCCCcHHHhccccc-eeecCCCCHHHHHHHHHhC
Confidence 4468999999 6899999999999 6899999999 54432111 12224 6788999999888887764
|
| >4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=96.56 E-value=0.0021 Score=53.31 Aligned_cols=76 Identities=16% Similarity=0.073 Sum_probs=48.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCC-CCCCceeEEEeeCCCHHHHHHHHHhcc-c-ccc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF-PTALVDRYITFDALDPTDTALKLSLIS-Q-EIT 84 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~-~~~~~~~~i~~Dl~d~~~~~~~~~~~~-~-~~~ 84 (211)
.+++|||+||+|.||...++.+. ..|.+|+++++++.+... ..-+...++ |.. +++.+.+.... . .+|
T Consensus 159 ~g~~VlV~Gasg~iG~~~~~~a~-----~~Ga~Vi~~~~~~~~~~~~~~~ga~~v~--~~~--~~~~~~v~~~~~~~g~D 229 (342)
T 4eye_A 159 AGETVLVLGAAGGIGTAAIQIAK-----GMGAKVIAVVNRTAATEFVKSVGADIVL--PLE--EGWAKAVREATGGAGVD 229 (342)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHH-----HTTCEEEEEESSGGGHHHHHHHTCSEEE--ESS--TTHHHHHHHHTTTSCEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-----HcCCEEEEEeCCHHHHHHHHhcCCcEEe--cCc--hhHHHHHHHHhCCCCce
Confidence 36789999999999999999988 689999999997654210 111222033 443 22333332221 1 288
Q ss_pred eEEeeccc
Q 028258 85 NLFWVPLQ 92 (211)
Q Consensus 85 ~v~~~a~~ 92 (211)
++|.+++.
T Consensus 230 vvid~~g~ 237 (342)
T 4eye_A 230 MVVDPIGG 237 (342)
T ss_dssp EEEESCC-
T ss_pred EEEECCch
Confidence 99988874
|
| >3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A* | Back alignment and structure |
|---|
Probab=96.56 E-value=0.0041 Score=50.27 Aligned_cols=67 Identities=15% Similarity=0.040 Sum_probs=44.4
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCc-EEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccceEE
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITNLF 87 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~-~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~ 87 (211)
+|+++|+|+ |.+|++++..|. +.|. +|++++|++++.......+. .+ ..+++.+.+.+ .|.||
T Consensus 117 ~k~vlvlGa-Gg~g~aia~~L~-----~~G~~~v~v~~R~~~~a~~la~~~~-~~-----~~~~~~~~~~~----aDiVI 180 (277)
T 3don_A 117 DAYILILGA-GGASKGIANELY-----KIVRPTLTVANRTMSRFNNWSLNIN-KI-----NLSHAESHLDE----FDIII 180 (277)
T ss_dssp GCCEEEECC-SHHHHHHHHHHH-----TTCCSCCEEECSCGGGGTTCCSCCE-EE-----CHHHHHHTGGG----CSEEE
T ss_pred CCEEEEECC-cHHHHHHHHHHH-----HCCCCEEEEEeCCHHHHHHHHHhcc-cc-----cHhhHHHHhcC----CCEEE
Confidence 578999995 899999999999 6888 79999998765321112233 22 12333333333 67888
Q ss_pred eecc
Q 028258 88 WVPL 91 (211)
Q Consensus 88 ~~a~ 91 (211)
++..
T Consensus 181 naTp 184 (277)
T 3don_A 181 NTTP 184 (277)
T ss_dssp ECCC
T ss_pred ECcc
Confidence 7753
|
| >1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A* | Back alignment and structure |
|---|
Probab=96.55 E-value=0.0083 Score=49.29 Aligned_cols=97 Identities=18% Similarity=0.126 Sum_probs=60.3
Q ss_pred ccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCC--cEEEEEeCCCCCC-----------CCCCCCceeEEEeeCCCHH
Q 028258 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSP--WKVYGAARRPPPG-----------WFPTALVDRYITFDALDPT 70 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g--~~V~~~~R~~~~~-----------~~~~~~~~~~i~~Dl~d~~ 70 (211)
|..++.++|.|+|| |.+|..++..|+. .+ .+|+++++++... ......++ +. .| +.
T Consensus 1 m~~~~~~kI~IIGa-G~vG~sla~~l~~-----~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~-i~-~~--~~- 69 (316)
T 1ldn_A 1 MKNNGGARVVVIGA-GFVGASYVFALMN-----QGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVD-IW-HG--DY- 69 (316)
T ss_dssp CTTTTSCEEEEECC-SHHHHHHHHHHHH-----HTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCE-EE-EC--CG-
T ss_pred CCCCCCCEEEEECc-CHHHHHHHHHHHh-----CCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeE-EE-cC--cH-
Confidence 33444578999998 9999999999973 44 3799999875421 00111233 22 21 21
Q ss_pred HHHHHHHhcccccceEEeecccCCc---hhHHHHhhcHHHHHHHHHHHHhc
Q 028258 71 DTALKLSLISQEITNLFWVPLQVQE---SEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 71 ~~~~~~~~~~~~~~~v~~~a~~~~~---~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
+++++ .|.||.+++.... +..+....|....+.+++.+.+.
T Consensus 70 ---~al~~----aDvViia~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~ 113 (316)
T 1ldn_A 70 ---DDCRD----ADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMAS 113 (316)
T ss_dssp ---GGTTT----CSEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHH
T ss_pred ---HHhCC----CCEEEEcCCCCCCCCCCHHHHHHcChHHHHHHHHHHHHH
Confidence 12444 5788878765432 22344566777778888888877
|
| >3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP} | Back alignment and structure |
|---|
Probab=96.55 E-value=0.0022 Score=51.69 Aligned_cols=35 Identities=17% Similarity=0.309 Sum_probs=31.5
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
++|.|+|+||.+|+.+++.|. +.|++|++++|++.
T Consensus 12 m~I~iIG~tG~mG~~la~~l~-----~~g~~V~~~~r~~~ 46 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIH-----DSAHHLAAIEIAPE 46 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-----HSSSEEEEECCSHH
T ss_pred CEEEEECCCCHHHHHHHHHHH-----hCCCEEEEEECCHH
Confidence 579999999999999999999 68899999998754
|
| >1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D | Back alignment and structure |
|---|
Probab=96.53 E-value=0.0012 Score=53.57 Aligned_cols=73 Identities=14% Similarity=0.099 Sum_probs=48.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCC-CCCCceeEEEeeCCCHHHHHHHHHhcccccceE
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF-PTALVDRYITFDALDPTDTALKLSLISQEITNL 86 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~-~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v 86 (211)
.++++||+||+|.+|..+++.+. ..|.+|++++|++.+... ..-+.+ . ..|..+.+++.+.+. . +|++
T Consensus 125 ~g~~vlV~Ga~G~vG~~~~~~a~-----~~Ga~Vi~~~~~~~~~~~~~~~ga~-~-~~~~~~~~~~~~~~~---~-~d~v 193 (302)
T 1iz0_A 125 PGEKVLVQAAAGALGTAAVQVAR-----AMGLRVLAAASRPEKLALPLALGAE-E-AATYAEVPERAKAWG---G-LDLV 193 (302)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHH-----HTTCEEEEEESSGGGSHHHHHTTCS-E-EEEGGGHHHHHHHTT---S-EEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHhcCCC-E-EEECCcchhHHHHhc---C-ceEE
Confidence 35789999999999999999888 688999999997654311 112233 2 246555122333332 2 7888
Q ss_pred Eeeccc
Q 028258 87 FWVPLQ 92 (211)
Q Consensus 87 ~~~a~~ 92 (211)
|. ++.
T Consensus 194 id-~g~ 198 (302)
T 1iz0_A 194 LE-VRG 198 (302)
T ss_dssp EE-CSC
T ss_pred EE-CCH
Confidence 88 754
|
| >3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae} | Back alignment and structure |
|---|
Probab=96.52 E-value=0.0066 Score=49.31 Aligned_cols=41 Identities=15% Similarity=0.224 Sum_probs=29.7
Q ss_pred ccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEE-eCCC
Q 028258 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGA-ARRP 48 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~-~R~~ 48 (211)
|.|+++.+|.|.||+|.+|+.+++.+.+ ..+.++.+. +|++
T Consensus 16 ~~m~~~irV~V~Ga~GrMGr~i~~~v~~----~~~~eLvg~vd~~~ 57 (288)
T 3ijp_A 16 TQGPGSMRLTVVGANGRMGRELITAIQR----RKDVELCAVLVRKG 57 (288)
T ss_dssp -----CEEEEESSTTSHHHHHHHHHHHT----CSSEEEEEEBCCTT
T ss_pred hhccCCeEEEEECCCCHHHHHHHHHHHh----CCCCEEEEEEecCC
Confidence 3344556899999999999999999985 678886654 6654
|
| >4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A* | Back alignment and structure |
|---|
Probab=96.42 E-value=0.0023 Score=53.69 Aligned_cols=35 Identities=29% Similarity=0.266 Sum_probs=27.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAAR 46 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R 46 (211)
++.+|.|.||||++|+.|++.|.+ ....++..+..
T Consensus 6 ~~~kVaIvGATGyvG~eLlrlL~~----hP~~el~~l~S 40 (359)
T 4dpk_A 6 RTLKAAILGATGLVGIEYVRMLSN----HPYIKPAYLAG 40 (359)
T ss_dssp CCEEEEETTTTSTTHHHHHHHHTT----CSSEEEEEEEE
T ss_pred CCCeEEEECCCCHHHHHHHHHHHh----CCCceEEEEEC
Confidence 346899999999999999998884 45567766654
|
| >4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A* | Back alignment and structure |
|---|
Probab=96.42 E-value=0.0023 Score=53.69 Aligned_cols=35 Identities=29% Similarity=0.266 Sum_probs=27.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAAR 46 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R 46 (211)
++.+|.|.||||++|+.|++.|.+ ....++..+..
T Consensus 6 ~~~kVaIvGATGyvG~eLlrlL~~----hP~~el~~l~S 40 (359)
T 4dpl_A 6 RTLKAAILGATGLVGIEYVRMLSN----HPYIKPAYLAG 40 (359)
T ss_dssp CCEEEEETTTTSTTHHHHHHHHTT----CSSEEEEEEEE
T ss_pred CCCeEEEECCCCHHHHHHHHHHHh----CCCceEEEEEC
Confidence 346899999999999999998884 45567766654
|
| >3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=96.39 E-value=0.0031 Score=51.26 Aligned_cols=37 Identities=22% Similarity=0.087 Sum_probs=32.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
|+++|.|+| .|.+|+.+++.|+ +.|++|++++|++.+
T Consensus 14 ~~~~I~vIG-~G~mG~~~A~~l~-----~~G~~V~~~dr~~~~ 50 (296)
T 3qha_A 14 EQLKLGYIG-LGNMGAPMATRMT-----EWPGGVTVYDIRIEA 50 (296)
T ss_dssp -CCCEEEEC-CSTTHHHHHHHHT-----TSTTCEEEECSSTTT
T ss_pred CCCeEEEEC-cCHHHHHHHHHHH-----HCCCeEEEEeCCHHH
Confidence 456899998 8999999999999 689999999998775
|
| >1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A | Back alignment and structure |
|---|
Probab=96.39 E-value=0.0012 Score=55.28 Aligned_cols=75 Identities=13% Similarity=0.024 Sum_probs=49.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCC-CCCCceeEEEeeCCCHHHHHHHHHhcccccceE
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF-PTALVDRYITFDALDPTDTALKLSLISQEITNL 86 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~-~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v 86 (211)
..++++|+|+ |.+|+.+++.|. ..|.+|++++|++.+... ...... .+..+..+.+.+.+.+.+ +|.|
T Consensus 166 ~~~~VlViGa-GgvG~~aa~~a~-----~~Ga~V~v~dr~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~~----~DvV 234 (361)
T 1pjc_A 166 KPGKVVILGG-GVVGTEAAKMAV-----GLGAQVQIFDINVERLSYLETLFGS-RVELLYSNSAEIETAVAE----ADLL 234 (361)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHGG-GSEEEECCHHHHHHHHHT----CSEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHH-----hCCCEEEEEeCCHHHHHHHHHhhCc-eeEeeeCCHHHHHHHHcC----CCEE
Confidence 3589999998 999999999998 688899999998653210 000011 111222345556666664 6889
Q ss_pred EeecccC
Q 028258 87 FWVPLQV 93 (211)
Q Consensus 87 ~~~a~~~ 93 (211)
|++++..
T Consensus 235 I~~~~~~ 241 (361)
T 1pjc_A 235 IGAVLVP 241 (361)
T ss_dssp EECCCCT
T ss_pred EECCCcC
Confidence 8888653
|
| >4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A | Back alignment and structure |
|---|
Probab=96.38 E-value=0.0055 Score=52.37 Aligned_cols=68 Identities=15% Similarity=0.022 Sum_probs=50.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccceEE
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITNLF 87 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~ 87 (211)
++++|+|+| +|.+|+.+++.+. +.|++|++++..+..... .-.-+ .+..|+.|.+.+.+.+++ +|.|+
T Consensus 34 ~~~~IlIlG-~G~lg~~~~~aa~-----~lG~~v~v~d~~~~~p~~-~~ad~-~~~~~~~d~~~l~~~a~~----~D~V~ 101 (419)
T 4e4t_A 34 PGAWLGMVG-GGQLGRMFCFAAQ-----SMGYRVAVLDPDPASPAG-AVADR-HLRAAYDDEAALAELAGL----CEAVS 101 (419)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHH-----HTTCEEEEECSCTTCHHH-HHSSE-EECCCTTCHHHHHHHHHH----CSEEE
T ss_pred CCCEEEEEC-CCHHHHHHHHHHH-----HCCCEEEEECCCCcCchh-hhCCE-EEECCcCCHHHHHHHHhc----CCEEE
Confidence 467899998 6899999999999 699999999865543110 01123 667899999988888765 56655
|
| >3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A | Back alignment and structure |
|---|
Probab=96.28 E-value=0.0078 Score=50.58 Aligned_cols=23 Identities=22% Similarity=0.392 Sum_probs=20.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHhh
Q 028258 8 PKSVALIIGVTGISGLSLAEALK 30 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~ 30 (211)
|+.+|.|.||||++|+.|++.|.
T Consensus 1 m~~kVaIvGATG~vG~eLlrlL~ 23 (366)
T 3pwk_A 1 MGYTVAVVGATGAVGAQMIKMLE 23 (366)
T ss_dssp -CEEEEEETTTSHHHHHHHHHHH
T ss_pred CCcEEEEECCCChHHHHHHHHHh
Confidence 35689999999999999999988
|
| >2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A* | Back alignment and structure |
|---|
Probab=96.28 E-value=0.0022 Score=54.13 Aligned_cols=75 Identities=11% Similarity=-0.058 Sum_probs=51.3
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-CCC-CCceeEEEeeCCCHHHHHHHHHhcccccc
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-FPT-ALVDRYITFDALDPTDTALKLSLISQEIT 84 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-~~~-~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~ 84 (211)
..+++++|+|+ |.||+.+++.|. ..|.+|++++|++.+.. ... -+.. . ..+..+.+++.+.+++ .|
T Consensus 166 l~g~~V~ViG~-G~iG~~~a~~a~-----~~Ga~V~~~d~~~~~l~~~~~~~g~~-~-~~~~~~~~~l~~~l~~----aD 233 (377)
T 2vhw_A 166 VEPADVVVIGA-GTAGYNAARIAN-----GMGATVTVLDINIDKLRQLDAEFCGR-I-HTRYSSAYELEGAVKR----AD 233 (377)
T ss_dssp BCCCEEEEECC-SHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHTTTS-S-EEEECCHHHHHHHHHH----CS
T ss_pred CCCCEEEEECC-CHHHHHHHHHHH-----hCCCEEEEEeCCHHHHHHHHHhcCCe-e-EeccCCHHHHHHHHcC----CC
Confidence 34789999997 999999999998 68899999999765311 000 1111 1 2344556667777765 57
Q ss_pred eEEeecccC
Q 028258 85 NLFWVPLQV 93 (211)
Q Consensus 85 ~v~~~a~~~ 93 (211)
+|+.+++..
T Consensus 234 vVi~~~~~p 242 (377)
T 2vhw_A 234 LVIGAVLVP 242 (377)
T ss_dssp EEEECCCCT
T ss_pred EEEECCCcC
Confidence 888776543
|
| >1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A* | Back alignment and structure |
|---|
Probab=96.23 E-value=0.011 Score=48.42 Aligned_cols=93 Identities=14% Similarity=-0.020 Sum_probs=57.6
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCc-EEEEEeCCCCCCC-----CC------CCCceeEEEeeCCCHHHHHHHH
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRPPPGW-----FP------TALVDRYITFDALDPTDTALKL 76 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~-~V~~~~R~~~~~~-----~~------~~~~~~~i~~Dl~d~~~~~~~~ 76 (211)
+++|.|+|| |.+|..++..|+ ..|+ +|.++++++.+.. +. ....+ .... +|. +++
T Consensus 2 ~~kI~VIGa-G~vG~~~a~~la-----~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~-i~~t--~d~----~a~ 68 (309)
T 1ur5_A 2 RKKISIIGA-GFVGSTTAHWLA-----AKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVR-VTGT--NNY----ADT 68 (309)
T ss_dssp CCEEEEECC-SHHHHHHHHHHH-----HTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCC-EEEE--SCG----GGG
T ss_pred CCEEEEECC-CHHHHHHHHHHH-----HCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeE-EEEC--CCH----HHH
Confidence 368999998 999999999998 4665 8888888764310 00 01222 1110 121 124
Q ss_pred HhcccccceEEeecccCCc---hhHHHHhhcHHHHHHHHHHHHhc
Q 028258 77 SLISQEITNLFWVPLQVQE---SEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 77 ~~~~~~~~~v~~~a~~~~~---~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
++ .|.||.+++.... +..+....|....+.+.+.+.+.
T Consensus 69 ~~----aD~Vi~a~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~ 109 (309)
T 1ur5_A 69 AN----SDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPL 109 (309)
T ss_dssp TT----CSEEEECCCC--------CHHHHHHHHHHHHHHHHHGGG
T ss_pred CC----CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhh
Confidence 44 6788888876442 12344567888888889888887
|
| >3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=96.17 E-value=0.032 Score=44.12 Aligned_cols=74 Identities=15% Similarity=0.141 Sum_probs=47.5
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEE-EeCCCCCC---C----CCC-CCceeEEEeeCCCHHHHHHHHHhcc
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYG-AARRPPPG---W----FPT-ALVDRYITFDALDPTDTALKLSLIS 80 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~-~~R~~~~~---~----~~~-~~~~~~i~~Dl~d~~~~~~~~~~~~ 80 (211)
.+|.|+|+ |.+|+.+++.+.+ ..+ ++.+ ++|++... . ... .... +..|++.++.+.+.++ +.
T Consensus 4 mkI~ViGa-GrMG~~i~~~l~~----~~~-eLva~~d~~~~~~~gv~v~~dl~~l~~~D--VvIDft~p~a~~~~~~-l~ 74 (243)
T 3qy9_A 4 MKILLIGY-GAMNQRVARLAEE----KGH-EIVGVIENTPKATTPYQQYQHIADVKGAD--VAIDFSNPNLLFPLLD-ED 74 (243)
T ss_dssp CEEEEECC-SHHHHHHHHHHHH----TTC-EEEEEECSSCC--CCSCBCSCTTTCTTCS--EEEECSCHHHHHHHHT-SC
T ss_pred eEEEEECc-CHHHHHHHHHHHh----CCC-EEEEEEecCccccCCCceeCCHHHHhCCC--EEEEeCChHHHHHHHH-Hh
Confidence 57999999 9999999999984 334 7665 66654311 0 000 1334 3479999998877776 55
Q ss_pred cccceEEeeccc
Q 028258 81 QEITNLFWVPLQ 92 (211)
Q Consensus 81 ~~~~~v~~~a~~ 92 (211)
..+..|+...+.
T Consensus 75 ~g~~vVigTTG~ 86 (243)
T 3qy9_A 75 FHLPLVVATTGE 86 (243)
T ss_dssp CCCCEEECCCSS
T ss_pred cCCceEeCCCCC
Confidence 435666554443
|
| >3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1 | Back alignment and structure |
|---|
Probab=96.16 E-value=0.016 Score=47.94 Aligned_cols=92 Identities=11% Similarity=-0.030 Sum_probs=61.5
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCc--EEEEEeCCCCCCC-----CC-----CCCceeEE-EeeCCCHHHHHHH
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPW--KVYGAARRPPPGW-----FP-----TALVDRYI-TFDALDPTDTALK 75 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~--~V~~~~R~~~~~~-----~~-----~~~~~~~i-~~Dl~d~~~~~~~ 75 (211)
.++|.|+|| |.+|+.++..|+ ..|. +|.++++++.+.. +. ..... .. ..|+.+
T Consensus 21 ~~kV~ViGa-G~vG~~~a~~la-----~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~-i~~t~d~~~------- 86 (330)
T 3ldh_A 21 YNKITVVGC-DAVGMADAISVL-----MKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAK-IVSGKDYSV------- 86 (330)
T ss_dssp CCEEEEEST-THHHHHHHHHHH-----HHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSE-EEEESSSCS-------
T ss_pred CCEEEEECC-CHHHHHHHHHHH-----hCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCe-EEEcCCHHH-------
Confidence 468999998 999999999998 4665 7999988654210 00 01112 22 234322
Q ss_pred HHhcccccceEEeecccCCc---hhHHHHhhcHHHHHHHHHHHHhc
Q 028258 76 LSLISQEITNLFWVPLQVQE---SEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 76 ~~~~~~~~~~v~~~a~~~~~---~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
+++ .|.||.+++.... +..+....|....+.+.+.+.+.
T Consensus 87 ~~d----aDiVIitaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~ 128 (330)
T 3ldh_A 87 SAG----SKLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKH 128 (330)
T ss_dssp CSS----CSEEEECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHH
T ss_pred hCC----CCEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhh
Confidence 333 6788888877542 34466788988888899998887
|
| >3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber} | Back alignment and structure |
|---|
Probab=96.12 E-value=0.011 Score=48.56 Aligned_cols=96 Identities=14% Similarity=0.014 Sum_probs=61.5
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCc--EEEEEeCCCCCCC-----CC------CCCceeEEEeeCCCHHHHHHHHH
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPW--KVYGAARRPPPGW-----FP------TALVDRYITFDALDPTDTALKLS 77 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~--~V~~~~R~~~~~~-----~~------~~~~~~~i~~Dl~d~~~~~~~~~ 77 (211)
+|.|+|| |.+|+.++..|+ ..+. +|+++++++.+.. +. ..... +...| +. ++++
T Consensus 2 kv~ViGa-G~vG~~~a~~l~-----~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~-v~~~~--~~----~a~~ 68 (314)
T 3nep_X 2 KVTVIGA-GNVGATVAECVA-----RQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTR-VTGTN--DY----GPTE 68 (314)
T ss_dssp EEEEECC-SHHHHHHHHHHH-----HHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCE-EEEES--SS----GGGT
T ss_pred EEEEECC-CHHHHHHHHHHH-----hCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcE-EEECC--CH----HHhC
Confidence 6899996 999999999998 3555 8999998775311 00 11222 22121 11 1234
Q ss_pred hcccccceEEeecccCCc---hhHHHHhhcHHHHHHHHHHHHhcCCCCCCce
Q 028258 78 LISQEITNLFWVPLQVQE---SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLR 126 (211)
Q Consensus 78 ~~~~~~~~v~~~a~~~~~---~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ 126 (211)
+ .|+||.+++.... +..+....|...++.+.+.+.+. ++...
T Consensus 69 ~----aDvVii~ag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~---~p~a~ 113 (314)
T 3nep_X 69 D----SDVCIITAGLPRSPGMSRDDLLAKNTEIVGGVTEQFVEG---SPDST 113 (314)
T ss_dssp T----CSEEEECCCC-------CHHHHHHHHHHHHHHHHHHHTT---CTTCE
T ss_pred C----CCEEEECCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHHh---CCCcE
Confidence 3 5788888876532 34566788999999999999887 55443
|
| >3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A* | Back alignment and structure |
|---|
Probab=96.05 E-value=0.0065 Score=49.93 Aligned_cols=74 Identities=11% Similarity=-0.014 Sum_probs=49.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCc-EEEEEeCCCC---CCC-C-----CCCCceeEEEeeCCCHHHHHHHHH
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRPP---PGW-F-----PTALVDRYITFDALDPTDTALKLS 77 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~-~V~~~~R~~~---~~~-~-----~~~~~~~~i~~Dl~d~~~~~~~~~ 77 (211)
.+|+++|+|| |.+|++++..|. +.|. +|+++.|+++ +.. + ...+.. ....++.+.+.+.+.+.
T Consensus 147 ~gk~~lVlGA-GGaaraia~~L~-----~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~-v~~~~~~~l~~~~~~l~ 219 (312)
T 3t4e_A 147 RGKTMVLLGA-GGAATAIGAQAA-----IEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCV-VTVTDLADQHAFTEALA 219 (312)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHH-----HTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCE-EEEEETTCHHHHHHHHH
T ss_pred CCCEEEEECc-CHHHHHHHHHHH-----HcCCCEEEEEECCCchHHHHHHHHHHhhhccCcc-eEEechHhhhhhHhhcc
Confidence 4689999996 999999999999 6787 7999999833 211 0 011233 44567766544445555
Q ss_pred hcccccceEEeeccc
Q 028258 78 LISQEITNLFWVPLQ 92 (211)
Q Consensus 78 ~~~~~~~~v~~~a~~ 92 (211)
+ .|.||++...
T Consensus 220 ~----~DiIINaTp~ 230 (312)
T 3t4e_A 220 S----ADILTNGTKV 230 (312)
T ss_dssp H----CSEEEECSST
T ss_pred C----ceEEEECCcC
Confidence 4 5788887643
|
| >4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=96.02 E-value=0.0029 Score=54.86 Aligned_cols=69 Identities=17% Similarity=0.064 Sum_probs=52.0
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-C-CCCCceeEEEeeCCCHHHHHHHHHhcccccceEE
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-F-PTALVDRYITFDALDPTDTALKLSLISQEITNLF 87 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-~-~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~ 87 (211)
++|+|.| .|-+|++|++.|. ..|++|+++++++.... . ..-++. ++.+|-++++.+.++ +++. .|.++
T Consensus 4 M~iiI~G-~G~vG~~la~~L~-----~~~~~v~vId~d~~~~~~~~~~~~~~-~i~Gd~~~~~~L~~A--gi~~-ad~~i 73 (461)
T 4g65_A 4 MKIIILG-AGQVGGTLAENLV-----GENNDITIVDKDGDRLRELQDKYDLR-VVNGHASHPDVLHEA--GAQD-ADMLV 73 (461)
T ss_dssp EEEEEEC-CSHHHHHHHHHTC-----STTEEEEEEESCHHHHHHHHHHSSCE-EEESCTTCHHHHHHH--TTTT-CSEEE
T ss_pred CEEEEEC-CCHHHHHHHHHHH-----HCCCCEEEEECCHHHHHHHHHhcCcE-EEEEcCCCHHHHHhc--CCCc-CCEEE
Confidence 4688998 6999999999999 68999999999876421 1 123678 899999999987765 2322 56654
Q ss_pred e
Q 028258 88 W 88 (211)
Q Consensus 88 ~ 88 (211)
-
T Consensus 74 a 74 (461)
T 4g65_A 74 A 74 (461)
T ss_dssp E
T ss_pred E
Confidence 3
|
| >2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=96.01 E-value=0.0077 Score=50.28 Aligned_cols=33 Identities=18% Similarity=0.301 Sum_probs=27.8
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEe
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAA 45 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~ 45 (211)
+.+|.|.||||++|+.+++.|.+ ....+|.++.
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~----~p~~elvai~ 36 (350)
T 2ep5_A 4 KIKVSLLGSTGMVGQKMVKMLAK----HPYLELVKVS 36 (350)
T ss_dssp CEEEEEESCSSHHHHHHHHHHTT----CSSEEEEEEE
T ss_pred CcEEEEECcCCHHHHHHHHHHHh----CCCcEEEEEe
Confidence 46799999999999999999985 4567888775
|
| >2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A* | Back alignment and structure |
|---|
Probab=95.97 E-value=0.024 Score=46.75 Aligned_cols=102 Identities=14% Similarity=0.016 Sum_probs=63.9
Q ss_pred cCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCc--EEEEEeCCCCCCC-----CC-----CCCceeEEEeeCCCHHHH
Q 028258 5 DQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPW--KVYGAARRPPPGW-----FP-----TALVDRYITFDALDPTDT 72 (211)
Q Consensus 5 ~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~--~V~~~~R~~~~~~-----~~-----~~~~~~~i~~Dl~d~~~~ 72 (211)
...++.+|.|+|| |.+|..++..|+. .+. +|.++++++.+.. +. ...++ +. .| +.+
T Consensus 5 ~~~~~~KI~IiGa-G~vG~~la~~l~~-----~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~-i~-~~--~~~-- 72 (326)
T 2zqz_A 5 TDKDHQKVILVGD-GAVGSSYAYAMVL-----QGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKK-IY-SA--EYS-- 72 (326)
T ss_dssp -CCCCCEEEEECC-SHHHHHHHHHHHH-----HTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCE-EE-EC--CGG--
T ss_pred ccCCCCEEEEECC-CHHHHHHHHHHHc-----CCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeE-EE-EC--CHH--
Confidence 4455678999998 9999999999883 443 7888988643210 00 12223 22 22 222
Q ss_pred HHHHHhcccccceEEeecccCCc---hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceE
Q 028258 73 ALKLSLISQEITNLFWVPLQVQE---SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRH 127 (211)
Q Consensus 73 ~~~~~~~~~~~~~v~~~a~~~~~---~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~ 127 (211)
++++ .|+|+.+++.... +..+....|...++.+.+.+.+. ++...-
T Consensus 73 --a~~~----aDvVii~ag~~~k~g~~R~dl~~~n~~i~~~i~~~i~~~---~p~a~i 121 (326)
T 2zqz_A 73 --DAKD----ADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDS---GFNGIF 121 (326)
T ss_dssp --GGGG----CSEEEECCCCC-----CHHHHHHHHHHHHHHHHHHHHHH---TCCSEE
T ss_pred --HhCC----CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH---CCCeEE
Confidence 2454 5788888876432 23455677888888999988887 554443
|
| >2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6 | Back alignment and structure |
|---|
Probab=95.97 E-value=0.0079 Score=48.88 Aligned_cols=36 Identities=22% Similarity=0.155 Sum_probs=31.9
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
.++|.|+||.|.+|+.++..|. +.|++|++++|++.
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~-----~~G~~V~~~~~~~~ 56 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLR-----ASGYPISILDREDW 56 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHH-----TTTCCEEEECTTCG
T ss_pred CCEEEEEcCCCHHHHHHHHHHH-----hCCCeEEEEECCcc
Confidence 4679999999999999999999 68999999998754
|
| >1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1 | Back alignment and structure |
|---|
Probab=95.95 E-value=0.035 Score=45.53 Aligned_cols=26 Identities=27% Similarity=0.239 Sum_probs=23.3
Q ss_pred ChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 19 GISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 19 G~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
|..|.+++++++ ..|++|+.+.|...
T Consensus 65 GkmG~aiAe~~~-----~~Ga~V~lv~g~~s 90 (313)
T 1p9o_A 65 GRRGATSAEAFL-----AAGYGVLFLYRARS 90 (313)
T ss_dssp CHHHHHHHHHHH-----HTTCEEEEEEETTS
T ss_pred cHHHHHHHHHHH-----HCCCEEEEEecCCC
Confidence 999999999999 79999999988543
|
| >3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=95.95 E-value=0.0032 Score=52.24 Aligned_cols=74 Identities=5% Similarity=-0.100 Sum_probs=48.0
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCC-CCCCceeEEEeeCCCHH---HHHHHHHhcccccce
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF-PTALVDRYITFDALDPT---DTALKLSLISQEITN 85 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~-~~~~~~~~i~~Dl~d~~---~~~~~~~~~~~~~~~ 85 (211)
++++|+||+|.||...++.+. ..|.+|+++++++.+... ..-+.. . ..|..+.+ .+.+...+. .+|+
T Consensus 166 ~~vli~gg~g~vG~~a~qla~-----~~Ga~Vi~~~~~~~~~~~~~~~Ga~-~-~~~~~~~~~~~~v~~~~~~~--g~D~ 236 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAK-----EEGFRPIVTVRRDEQIALLKDIGAA-H-VLNEKAPDFEATLREVMKAE--QPRI 236 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHH-----HHTCEEEEEESCGGGHHHHHHHTCS-E-EEETTSTTHHHHHHHHHHHH--CCCE
T ss_pred CEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHcCCC-E-EEECCcHHHHHHHHHHhcCC--CCcE
Confidence 689999999999999998888 688999999987664210 111222 1 34555432 222222222 2789
Q ss_pred EEeeccc
Q 028258 86 LFWVPLQ 92 (211)
Q Consensus 86 v~~~a~~ 92 (211)
+|.+++.
T Consensus 237 vid~~g~ 243 (349)
T 3pi7_A 237 FLDAVTG 243 (349)
T ss_dssp EEESSCH
T ss_pred EEECCCC
Confidence 9988863
|
| >2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.90 E-value=0.0057 Score=51.23 Aligned_cols=76 Identities=13% Similarity=0.032 Sum_probs=47.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-CCCCCceeEEEeeCCCHHHHHHHHHhcccccceE
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-FPTALVDRYITFDALDPTDTALKLSLISQEITNL 86 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v 86 (211)
.++++||+||+|.||...++.+. ..|.+|+++.+. .+.. ...-+.. . ..|..+.+ +.+.+..... +|.+
T Consensus 183 ~g~~VlV~Ga~G~vG~~~~qla~-----~~Ga~Vi~~~~~-~~~~~~~~lGa~-~-v~~~~~~~-~~~~~~~~~g-~D~v 252 (375)
T 2vn8_A 183 TGKRVLILGASGGVGTFAIQVMK-----AWDAHVTAVCSQ-DASELVRKLGAD-D-VIDYKSGS-VEEQLKSLKP-FDFI 252 (375)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEECG-GGHHHHHHTTCS-E-EEETTSSC-HHHHHHTSCC-BSEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-----hCCCEEEEEeCh-HHHHHHHHcCCC-E-EEECCchH-HHHHHhhcCC-CCEE
Confidence 45789999999999999998887 678899988743 3211 0111222 2 24555533 3333333332 7889
Q ss_pred EeecccC
Q 028258 87 FWVPLQV 93 (211)
Q Consensus 87 ~~~a~~~ 93 (211)
|.+++..
T Consensus 253 id~~g~~ 259 (375)
T 2vn8_A 253 LDNVGGS 259 (375)
T ss_dssp EESSCTT
T ss_pred EECCCCh
Confidence 8887643
|
| >1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* | Back alignment and structure |
|---|
Probab=95.90 E-value=0.0055 Score=51.24 Aligned_cols=74 Identities=16% Similarity=0.020 Sum_probs=50.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCC-C-CCCceeEEEeeCCCHHHHHHHHHhcccccce
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF-P-TALVDRYITFDALDPTDTALKLSLISQEITN 85 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~-~-~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~ 85 (211)
.+++|||+|+ |.||..+++.+. ..|.+|+++++++.+... . .-+.. . ..|..+.+.+.+... .+|.
T Consensus 187 ~g~~VlV~Ga-G~vG~~~~q~a~-----~~Ga~Vi~~~~~~~~~~~~~~~lGa~-~-v~~~~~~~~~~~~~~----~~D~ 254 (366)
T 1yqd_A 187 PGKHIGIVGL-GGLGHVAVKFAK-----AFGSKVTVISTSPSKKEEALKNFGAD-S-FLVSRDQEQMQAAAG----TLDG 254 (366)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHH-----HTTCEEEEEESCGGGHHHHHHTSCCS-E-EEETTCHHHHHHTTT----CEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHhcCCc-e-EEeccCHHHHHHhhC----CCCE
Confidence 4578999996 999999999888 688999999987654211 1 12233 2 357777655444332 2788
Q ss_pred EEeecccC
Q 028258 86 LFWVPLQV 93 (211)
Q Consensus 86 v~~~a~~~ 93 (211)
||.+++..
T Consensus 255 vid~~g~~ 262 (366)
T 1yqd_A 255 IIDTVSAV 262 (366)
T ss_dssp EEECCSSC
T ss_pred EEECCCcH
Confidence 99888753
|
| >1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=95.89 E-value=0.0081 Score=48.18 Aligned_cols=37 Identities=22% Similarity=0.152 Sum_probs=31.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
.+++++|+|+ |.+|++++..|+ +.|.+|++++|++++
T Consensus 118 ~~k~vlViGa-Gg~g~a~a~~L~-----~~G~~V~v~~R~~~~ 154 (271)
T 1nyt_A 118 PGLRILLIGA-GGASRGVLLPLL-----SLDCAVTITNRTVSR 154 (271)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHH-----HTTCEEEEECSSHHH
T ss_pred CCCEEEEECC-cHHHHHHHHHHH-----HcCCEEEEEECCHHH
Confidence 4689999997 789999999999 578899999998643
|
| >2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* | Back alignment and structure |
|---|
Probab=95.86 E-value=0.0024 Score=53.36 Aligned_cols=71 Identities=13% Similarity=0.096 Sum_probs=47.7
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCC---CCCC-CCCCCceeEEEeeCCC--HHHHHHHHHhcccc
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP---PPGW-FPTALVDRYITFDALD--PTDTALKLSLISQE 82 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~---~~~~-~~~~~~~~~i~~Dl~d--~~~~~~~~~~~~~~ 82 (211)
+++|||+|| |.+|..+++.+. ..|.+|++++|++ .+.. ...-+.+ .+ | .+ .+.+.+ . . . .
T Consensus 181 g~~VlV~Ga-G~vG~~~~q~a~-----~~Ga~Vi~~~~~~~~~~~~~~~~~~ga~-~v--~-~~~~~~~~~~-~-~-~-~ 246 (366)
T 2cdc_A 181 CRKVLVVGT-GPIGVLFTLLFR-----TYGLEVWMANRREPTEVEQTVIEETKTN-YY--N-SSNGYDKLKD-S-V-G-K 246 (366)
T ss_dssp TCEEEEESC-HHHHHHHHHHHH-----HHTCEEEEEESSCCCHHHHHHHHHHTCE-EE--E-CTTCSHHHHH-H-H-C-C
T ss_pred CCEEEEECC-CHHHHHHHHHHH-----hCCCEEEEEeCCccchHHHHHHHHhCCc-ee--c-hHHHHHHHHH-h-C-C-C
Confidence 689999999 999999999988 6888999999986 4321 1112345 44 6 54 112222 1 2 2 2
Q ss_pred cceEEeecccC
Q 028258 83 ITNLFWVPLQV 93 (211)
Q Consensus 83 ~~~v~~~a~~~ 93 (211)
+|+||.+++..
T Consensus 247 ~d~vid~~g~~ 257 (366)
T 2cdc_A 247 FDVIIDATGAD 257 (366)
T ss_dssp EEEEEECCCCC
T ss_pred CCEEEECCCCh
Confidence 78999888753
|
| >3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=95.79 E-value=0.042 Score=45.85 Aligned_cols=67 Identities=15% Similarity=-0.026 Sum_probs=48.5
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccceEEe
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITNLFW 88 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~~ 88 (211)
|+|+|+|+ |..|+.+++.|. +.|++|++++..+..... .-.-+ ++..|..|.+.+.+.+.+ +|.|+.
T Consensus 2 ~~Ililg~-g~~g~~~~~a~~-----~~G~~v~~~~~~~~~~~~-~~~~~-~~~~~~~d~~~l~~~~~~----~d~v~~ 68 (380)
T 3ax6_A 2 KKIGIIGG-GQLGKMMTLEAK-----KMGFYVIVLDPTPRSPAG-QVADE-QIVAGFFDSERIEDLVKG----SDVTTY 68 (380)
T ss_dssp CEEEEECC-SHHHHHHHHHHH-----HTTCEEEEEESSTTCTTG-GGSSE-EEECCTTCHHHHHHHHHT----CSEEEE
T ss_pred CEEEEECC-CHHHHHHHHHHH-----HCCCEEEEEeCCCCCchh-hhCce-EEECCCCCHHHHHHHHhc----CCEEEe
Confidence 68999995 899999999998 689999999876543211 11124 667899998888777744 566653
|
| >1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=95.78 E-value=0.019 Score=47.28 Aligned_cols=99 Identities=15% Similarity=0.012 Sum_probs=60.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCc--EEEEEeCCCCCCC-----CC-----CCCceeEEEeeCCCHHHHHHH
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPW--KVYGAARRPPPGW-----FP-----TALVDRYITFDALDPTDTALK 75 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~--~V~~~~R~~~~~~-----~~-----~~~~~~~i~~Dl~d~~~~~~~ 75 (211)
++.+|.|+|| |.+|..++..|+. .+. +|.++++++.+.. +. ...++ +. .| +.+ +
T Consensus 4 ~~~KI~IiGa-G~vG~~~a~~l~~-----~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~-v~-~~--~~~----a 69 (318)
T 1ez4_A 4 NHQKVVLVGD-GAVGSSYAFAMAQ-----QGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKK-IY-SG--EYS----D 69 (318)
T ss_dssp TBCEEEEECC-SHHHHHHHHHHHH-----HTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCE-EE-EC--CGG----G
T ss_pred CCCEEEEECC-CHHHHHHHHHHHc-----CCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeE-EE-EC--CHH----H
Confidence 3468999998 9999999999983 443 7888988643210 00 12223 22 22 222 2
Q ss_pred HHhcccccceEEeecccCCc---hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceE
Q 028258 76 LSLISQEITNLFWVPLQVQE---SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRH 127 (211)
Q Consensus 76 ~~~~~~~~~~v~~~a~~~~~---~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~ 127 (211)
+++ .|+|+.+++.... +..+....|...++.+.+.+.+. ++...-
T Consensus 70 ~~~----aDvVii~ag~~~~~g~~R~dl~~~n~~i~~~i~~~i~~~---~p~a~i 117 (318)
T 1ez4_A 70 CKD----ADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDS---GFDGIF 117 (318)
T ss_dssp GTT----CSEEEECCCC----------CHHHHHHHHHHHHHHHHHT---TCCSEE
T ss_pred hCC----CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh---CCCeEE
Confidence 444 5788888876432 22345677888888999988887 554443
|
| >1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A | Back alignment and structure |
|---|
Probab=95.77 E-value=0.0029 Score=52.25 Aligned_cols=76 Identities=13% Similarity=0.016 Sum_probs=47.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-CCCCCceeEEEeeCCCHHHHHHHHHhcccccceE
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-FPTALVDRYITFDALDPTDTALKLSLISQEITNL 86 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v 86 (211)
.++++||+|| |.+|..+++.+. ..|++|++++|++.+.. ...-+.. . ..|..+.+ +.+.+......+|++
T Consensus 164 ~g~~VlV~Ga-G~vG~~~~~~a~-----~~Ga~Vi~~~~~~~~~~~~~~lGa~-~-~~d~~~~~-~~~~~~~~~~~~d~v 234 (339)
T 1rjw_A 164 PGEWVAIYGI-GGLGHVAVQYAK-----AMGLNVVAVDIGDEKLELAKELGAD-L-VVNPLKED-AAKFMKEKVGGVHAA 234 (339)
T ss_dssp TTCEEEEECC-STTHHHHHHHHH-----HTTCEEEEECSCHHHHHHHHHTTCS-E-EECTTTSC-HHHHHHHHHSSEEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHH-----HcCCEEEEEeCCHHHHHHHHHCCCC-E-EecCCCcc-HHHHHHHHhCCCCEE
Confidence 3578999999 779999999888 68899999998765321 0112223 2 24666432 222222110127889
Q ss_pred Eeeccc
Q 028258 87 FWVPLQ 92 (211)
Q Consensus 87 ~~~a~~ 92 (211)
|.+++.
T Consensus 235 id~~g~ 240 (339)
T 1rjw_A 235 VVTAVS 240 (339)
T ss_dssp EESSCC
T ss_pred EECCCC
Confidence 888763
|
| >3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A* | Back alignment and structure |
|---|
Probab=95.71 E-value=0.0094 Score=48.93 Aligned_cols=39 Identities=33% Similarity=0.538 Sum_probs=33.2
Q ss_pred cCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCc--EEEEEeCCCC
Q 028258 5 DQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPW--KVYGAARRPP 49 (211)
Q Consensus 5 ~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~--~V~~~~R~~~ 49 (211)
.++|.++|.|+| .|.+|+.+++.|. +.|+ +|++++|++.
T Consensus 29 ~~~~~~kI~IIG-~G~mG~slA~~l~-----~~G~~~~V~~~dr~~~ 69 (314)
T 3ggo_A 29 KSLSMQNVLIVG-VGFMGGSFAKSLR-----RSGFKGKIYGYDINPE 69 (314)
T ss_dssp CCCSCSEEEEES-CSHHHHHHHHHHH-----HTTCCSEEEEECSCHH
T ss_pred hhcCCCEEEEEe-eCHHHHHHHHHHH-----hCCCCCEEEEEECCHH
Confidence 344557899999 8999999999999 6888 8999999764
|
| >2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A* | Back alignment and structure |
|---|
Probab=95.70 E-value=0.0088 Score=46.20 Aligned_cols=35 Identities=37% Similarity=0.420 Sum_probs=30.3
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
+++|.|+| +|.+|+.+++.|. +.|++|++++|++.
T Consensus 28 ~~~I~iiG-~G~~G~~la~~l~-----~~g~~V~~~~r~~~ 62 (215)
T 2vns_A 28 APKVGILG-SGDFARSLATRLV-----GSGFKVVVGSRNPK 62 (215)
T ss_dssp -CCEEEEC-CSHHHHHHHHHHH-----HTTCCEEEEESSHH
T ss_pred CCEEEEEc-cCHHHHHHHHHHH-----HCCCEEEEEeCCHH
Confidence 35799999 8999999999999 57899999999765
|
| >4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=95.68 E-value=0.0077 Score=50.72 Aligned_cols=73 Identities=15% Similarity=0.089 Sum_probs=49.9
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccceE
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITNL 86 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v 86 (211)
|++++|||+|+ |.++..+++.+. +.|+++++++............-+ .+..|..|.+.+.+.++... +|.|
T Consensus 5 ~~~~~ilI~g~-g~~~~~~~~a~~-----~~G~~~v~v~~~~~~~~~~~~ad~-~~~~~~~d~~~l~~~~~~~~--~d~v 75 (403)
T 4dim_A 5 YDNKRLLILGA-GRGQLGLYKAAK-----ELGIHTIAGTMPNAHKPCLNLADE-ISYMDISNPDEVEQKVKDLN--LDGA 75 (403)
T ss_dssp -CCCEEEEECC-CGGGHHHHHHHH-----HHTCEEEEEECSSCCHHHHHHCSE-EEECCTTCHHHHHHHTTTSC--CSEE
T ss_pred cCCCEEEEECC-cHhHHHHHHHHH-----HCCCEEEEEcCCCCCCcchhhCCe-EEEecCCCHHHHHHHHHHcC--CCEE
Confidence 44689999985 557999999999 689999988753211000001124 67789999988888777654 6777
Q ss_pred Ee
Q 028258 87 FW 88 (211)
Q Consensus 87 ~~ 88 (211)
+.
T Consensus 76 ~~ 77 (403)
T 4dim_A 76 AT 77 (403)
T ss_dssp EC
T ss_pred Ee
Confidence 54
|
| >1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A* | Back alignment and structure |
|---|
Probab=95.66 E-value=0.037 Score=44.97 Aligned_cols=91 Identities=11% Similarity=-0.056 Sum_probs=61.1
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCc--EEEEEeCCCCCCC-----C------CCCCceeEEEeeCCCHHHHHHHHH
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPW--KVYGAARRPPPGW-----F------PTALVDRYITFDALDPTDTALKLS 77 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~--~V~~~~R~~~~~~-----~------~~~~~~~~i~~Dl~d~~~~~~~~~ 77 (211)
+|.|+|| |.+|..++..|+ ..++ +|.++++++.... + .....+ +... +|. ++++
T Consensus 2 kI~ViGa-G~vG~~la~~l~-----~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~-i~~t--~d~----~a~~ 68 (294)
T 1oju_A 2 KLGFVGA-GRVGSTSAFTCL-----LNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPK-IVGG--ADY----SLLK 68 (294)
T ss_dssp EEEEECC-SHHHHHHHHHHH-----HHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCE-EEEE--SCG----GGGT
T ss_pred EEEEECC-CHHHHHHHHHHH-----hCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCE-EEEe--CCH----HHhC
Confidence 6899998 999999999998 4666 8999998764310 0 011122 2211 122 2344
Q ss_pred hcccccceEEeecccCCc---hhHHHHhhcHHHHHHHHHHHHhc
Q 028258 78 LISQEITNLFWVPLQVQE---SEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 78 ~~~~~~~~v~~~a~~~~~---~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
+ .|.|+.+++.... +..+....|...++.+.+.+.+.
T Consensus 69 ~----aDiVViaag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~ 108 (294)
T 1oju_A 69 G----SEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVEN 108 (294)
T ss_dssp T----CSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred C----CCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhh
Confidence 4 5788888876532 34566788999999999999887
|
| >2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A* | Back alignment and structure |
|---|
Probab=95.64 E-value=0.023 Score=48.36 Aligned_cols=71 Identities=11% Similarity=-0.033 Sum_probs=51.1
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccceEEe
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITNLFW 88 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~~ 88 (211)
+++|||+|+ |.+|+.+++.+. +.|++|++++..+..... ...-+ .+..|..|.+.+.+.++... +|.|+.
T Consensus 19 ~~~ili~g~-g~~g~~~~~a~~-----~~G~~v~~v~~~~~~~~~-~~ad~-~~~~~~~d~~~l~~~~~~~~--~d~V~~ 88 (433)
T 2dwc_A 19 AQKILLLGS-GELGKEIAIEAQ-----RLGVEVVAVDRYANAPAM-QVAHR-SYVGNMMDKDFLWSVVEREK--PDAIIP 88 (433)
T ss_dssp CCEEEEESC-SHHHHHHHHHHH-----HTTCEEEEEESSTTCHHH-HHSSE-EEESCTTCHHHHHHHHHHHC--CSEEEE
T ss_pred CCEEEEECC-CHHHHHHHHHHH-----HCCCEEEEEECCCCChhh-hhcce-EEECCCCCHHHHHHHHHHcC--CCEEEE
Confidence 568999985 789999999999 699999999876543110 01124 66788989888877776443 677764
Q ss_pred e
Q 028258 89 V 89 (211)
Q Consensus 89 ~ 89 (211)
.
T Consensus 89 ~ 89 (433)
T 2dwc_A 89 E 89 (433)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A | Back alignment and structure |
|---|
Probab=95.62 E-value=0.0087 Score=49.73 Aligned_cols=35 Identities=17% Similarity=0.285 Sum_probs=28.9
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCC
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~ 48 (211)
.+|.|.||||++|+.|++.|.+ ...+++..+.++.
T Consensus 5 ~kv~IvGatG~vG~~l~~~L~~----~p~~el~~l~s~~ 39 (337)
T 3dr3_A 5 LNTLIVGASGYAGAELVTYVNR----HPHMNITALTVSA 39 (337)
T ss_dssp EEEEEETTTSHHHHHHHHHHHH----CTTEEEEEEEEET
T ss_pred eEEEEECCCChHHHHHHHHHHh----CCCCcEEEEEecC
Confidence 5799999999999999999984 4678888775443
|
| >3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A* | Back alignment and structure |
|---|
Probab=95.61 E-value=0.0078 Score=44.23 Aligned_cols=70 Identities=16% Similarity=0.035 Sum_probs=48.9
Q ss_pred CChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCC----------CCCCceeEEEeeCCCH--HHHHHHHHhccc--cc
Q 028258 18 TGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF----------PTALVDRYITFDALDP--TDTALKLSLISQ--EI 83 (211)
Q Consensus 18 tG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~----------~~~~~~~~i~~Dl~d~--~~~~~~~~~~~~--~~ 83 (211)
+|.++.++++.|. +.|++|++..|+...... ....+. .+.+|++++ +++.+.++.+.. .-
T Consensus 25 s~~p~~a~a~~La-----~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~G~~~~-~i~~Dv~~~~~~~v~~~~~~i~~~~G~ 98 (157)
T 3gxh_A 25 SGLPNEQQFSLLK-----QAGVDVVINLMPDSSKDAHPDEGKLVTQAGMDYV-YIPVDWQNPKVEDVEAFFAAMDQHKGK 98 (157)
T ss_dssp EBCCCHHHHHHHH-----HTTCCEEEECSCTTSTTSCTTHHHHHHHTTCEEE-ECCCCTTSCCHHHHHHHHHHHHHTTTS
T ss_pred cCCCCHHHHHHHH-----HcCCCEEEECCCcccccccccHHHHHHHcCCeEE-EecCCCCCCCHHHHHHHHHHHHhcCCC
Confidence 5678999999999 699999888776543210 012344 567899999 888777665432 12
Q ss_pred ceEEeecccC
Q 028258 84 TNLFWVPLQV 93 (211)
Q Consensus 84 ~~v~~~a~~~ 93 (211)
|+++||++..
T Consensus 99 dVLVnnAgg~ 108 (157)
T 3gxh_A 99 DVLVHCLANY 108 (157)
T ss_dssp CEEEECSBSH
T ss_pred CEEEECCCCC
Confidence 8999999754
|
| >3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans} | Back alignment and structure |
|---|
Probab=95.60 E-value=0.015 Score=49.12 Aligned_cols=35 Identities=17% Similarity=0.225 Sum_probs=26.6
Q ss_pred CCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEE
Q 028258 6 QNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGA 44 (211)
Q Consensus 6 ~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~ 44 (211)
+|++.+|.|.||||++|+.+++.|.+ ....++..+
T Consensus 16 ~M~~~kVaIvGAtG~vG~ell~lL~~----hp~~el~~l 50 (381)
T 3hsk_A 16 HMSVKKAGVLGATGSVGQRFILLLSK----HPEFEIHAL 50 (381)
T ss_dssp --CCEEEEEETTTSHHHHHHHHHHTT----CSSEEEEEE
T ss_pred cCCccEEEEECCCChHHHHHHHHHHc----CCCceEEEe
Confidence 34556899999999999999998884 344667654
|
| >2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* | Back alignment and structure |
|---|
Probab=95.60 E-value=0.0078 Score=49.70 Aligned_cols=75 Identities=16% Similarity=0.089 Sum_probs=47.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCc-EEEEEeCCCCCCC-CCCCCceeEEEeeCCCHHHHHHHHHhc-ccccc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRPPPGW-FPTALVDRYITFDALDPTDTALKLSLI-SQEIT 84 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~-~V~~~~R~~~~~~-~~~~~~~~~i~~Dl~d~~~~~~~~~~~-~~~~~ 84 (211)
.++++||+|| |.+|...++.+. ..|. +|++++|++.+.. ...- .. ...|..+.+ +.+.+... ...+|
T Consensus 164 ~g~~VlV~Ga-G~vG~~~~q~a~-----~~Ga~~Vi~~~~~~~~~~~~~~l-a~--~v~~~~~~~-~~~~~~~~~~~g~D 233 (343)
T 2dq4_A 164 SGKSVLITGA-GPIGLMAAMVVR-----ASGAGPILVSDPNPYRLAFARPY-AD--RLVNPLEED-LLEVVRRVTGSGVE 233 (343)
T ss_dssp TTSCEEEECC-SHHHHHHHHHHH-----HTTCCSEEEECSCHHHHGGGTTT-CS--EEECTTTSC-HHHHHHHHHSSCEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHH-----HcCCCEEEEECCCHHHHHHHHHh-HH--hccCcCccC-HHHHHHHhcCCCCC
Confidence 4578999999 999999999887 6888 8999998765321 1111 22 234555432 33333221 11278
Q ss_pred eEEeeccc
Q 028258 85 NLFWVPLQ 92 (211)
Q Consensus 85 ~v~~~a~~ 92 (211)
.+|.+++.
T Consensus 234 ~vid~~g~ 241 (343)
T 2dq4_A 234 VLLEFSGN 241 (343)
T ss_dssp EEEECSCC
T ss_pred EEEECCCC
Confidence 88888763
|
| >1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6 | Back alignment and structure |
|---|
Probab=95.50 E-value=0.013 Score=48.41 Aligned_cols=35 Identities=17% Similarity=0.123 Sum_probs=30.4
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
+++|.|+| .|.+|+.++..|. ..|++|++++|++.
T Consensus 4 ~mki~iiG-~G~~G~~~a~~L~-----~~g~~V~~~~r~~~ 38 (359)
T 1bg6_A 4 SKTYAVLG-LGNGGHAFAAYLA-----LKGQSVLAWDIDAQ 38 (359)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHH-----HTTCEEEEECSCHH
T ss_pred cCeEEEEC-CCHHHHHHHHHHH-----hCCCEEEEEeCCHH
Confidence 35899999 5999999999999 68899999999754
|
| >2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A* | Back alignment and structure |
|---|
Probab=95.49 E-value=0.042 Score=44.68 Aligned_cols=93 Identities=11% Similarity=-0.067 Sum_probs=59.9
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----C------CCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----F------PTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----~------~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
+|.|+|| |.||+.++..|+.. .---++..++.++.... + ...... .... .|.+ .+++
T Consensus 2 KV~IiGa-G~VG~~~a~~l~~~---~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~-i~~~--~d~~----~~~~- 69 (294)
T 2x0j_A 2 KLGFVGA-GRVGSTSAFTCLLN---LDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPK-IVGG--ADYS----LLKG- 69 (294)
T ss_dssp EEEEECC-SHHHHHHHHHHHHH---SCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCE-EEEE--SCGG----GGTT-
T ss_pred EEEEECc-CHHHHHHHHHHHhC---CCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCe-EecC--CCHH----HhCC-
Confidence 5889995 99999999998731 12236888887653210 0 011122 2222 1222 1343
Q ss_pred ccccceEEeecccCC---chhHHHHhhcHHHHHHHHHHHHhc
Q 028258 80 SQEITNLFWVPLQVQ---ESEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 80 ~~~~~~v~~~a~~~~---~~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
.|+|+..|+.+. .+..+.+..|...++.+.+.+.+.
T Consensus 70 ---aDvVvitAG~prkpGmtR~dLl~~Na~I~~~i~~~i~~~ 108 (294)
T 2x0j_A 70 ---SEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVEN 108 (294)
T ss_dssp ---CSEEEECCCCCCCSSSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred ---CCEEEEecCCCCCCCCchHHHHHHHHHHHHHHHHHHHhc
Confidence 578888888754 356678899999999999999987
|
| >3ouz_A Biotin carboxylase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol, LIG; HET: MSE ADP SRT TLA; 1.90A {Campylobacter jejuni subsp} PDB: 3ouu_A* | Back alignment and structure |
|---|
Probab=95.48 E-value=0.016 Score=49.55 Aligned_cols=72 Identities=13% Similarity=0.014 Sum_probs=47.4
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCC-CCCceeEEEe-------eCCCHHHHHHHHHh
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFP-TALVDRYITF-------DALDPTDTALKLSL 78 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~-~~~~~~~i~~-------Dl~d~~~~~~~~~~ 78 (211)
||.|+|||+| .|.+|..+++.+. +.|++++++...+...... .-.-+ .+.. +..|.+.+.+.++.
T Consensus 4 m~~~kiLI~g-~g~~a~~i~~aa~-----~~G~~~v~v~~~~~~~~~~~~~ad~-~~~i~~~~~~~~~~d~~~l~~~~~~ 76 (446)
T 3ouz_A 4 MEIKSILIAN-RGEIALRALRTIK-----EMGKKAICVYSEADKDALYLKYADA-SICIGKARSSESYLNIPAIIAAAEI 76 (446)
T ss_dssp TCCCEEEECC-CHHHHHHHHHHHH-----HTTCEEEEEEEGGGTTCTHHHHSSE-EEEEECCTTTTGGGCHHHHHHHHHH
T ss_pred cccceEEEEC-CCHHHHHHHHHHH-----HcCCEEEEEEcCcccccchHhhCCE-EEEcCCCCccccccCHHHHHHHHHH
Confidence 4568999998 6789999999999 6999999886543321100 00112 3333 66777777777765
Q ss_pred cccccceEE
Q 028258 79 ISQEITNLF 87 (211)
Q Consensus 79 ~~~~~~~v~ 87 (211)
.. +|.|+
T Consensus 77 ~~--~d~i~ 83 (446)
T 3ouz_A 77 AE--ADAIF 83 (446)
T ss_dssp HT--CSEEE
T ss_pred hC--cCEEE
Confidence 44 67665
|
| >3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=95.48 E-value=0.012 Score=42.15 Aligned_cols=36 Identities=22% Similarity=0.252 Sum_probs=31.3
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
.++++|+|+ |.+|+.+++.|. ..|++|++++|++.+
T Consensus 21 ~~~v~iiG~-G~iG~~~a~~l~-----~~g~~v~v~~r~~~~ 56 (144)
T 3oj0_A 21 GNKILLVGN-GMLASEIAPYFS-----YPQYKVTVAGRNIDH 56 (144)
T ss_dssp CCEEEEECC-SHHHHHHGGGCC-----TTTCEEEEEESCHHH
T ss_pred CCEEEEECC-CHHHHHHHHHHH-----hCCCEEEEEcCCHHH
Confidence 688999995 999999999998 678889999997654
|
| >2dzd_A Pyruvate carboxylase; biotin carboxylase, ligase; 2.40A {Geobacillus thermodenitrificans} | Back alignment and structure |
|---|
Probab=95.48 E-value=0.012 Score=50.61 Aligned_cols=76 Identities=8% Similarity=-0.025 Sum_probs=47.1
Q ss_pred ccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCC-CCCceeEEEe--------eCCCHHHHHH
Q 028258 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFP-TALVDRYITF--------DALDPTDTAL 74 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~-~~~~~~~i~~--------Dl~d~~~~~~ 74 (211)
|+.+|.|+|||+|+ |.++..+++.+. +.|++|++++..+...... ...-+ .+.. ++.|.+.+.+
T Consensus 1 m~~~~~k~ILI~g~-g~~~~~i~~a~~-----~~G~~vv~v~~~~~~~~~~~~~ad~-~~~i~~~~~~~~~y~d~~~l~~ 73 (461)
T 2dzd_A 1 METRRIRKVLVANR-GEIAIRVFRACT-----ELGIRTVAIYSKEDVGSYHRYKADE-AYLVGEGKKPIEAYLDIEGIIE 73 (461)
T ss_dssp --CCCCSEEEECSC-HHHHHHHHHHHH-----HHTCEEEEEECGGGTTCTHHHHSSS-EEECSTTSCTTGGGTCHHHHHH
T ss_pred CCCCcCcEEEEECC-cHHHHHHHHHHH-----HcCCEEEEEECCcccccchhhhCCE-EEEcCCCCCccccccCHHHHHH
Confidence 45556689999984 789999999998 6899999987654431100 00001 2221 2356677777
Q ss_pred HHHhcccccceEEe
Q 028258 75 KLSLISQEITNLFW 88 (211)
Q Consensus 75 ~~~~~~~~~~~v~~ 88 (211)
.++... +|.|+.
T Consensus 74 ~~~~~~--id~v~~ 85 (461)
T 2dzd_A 74 IAKAHD--VDAIHP 85 (461)
T ss_dssp HHHHTT--CCEEEC
T ss_pred HHHHhC--CCEEEE
Confidence 766544 677654
|
| >3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=95.46 E-value=0.0077 Score=49.81 Aligned_cols=72 Identities=13% Similarity=-0.060 Sum_probs=46.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-CCCCCceeEEEeeCCCHH---HHHHHHHhccccc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-FPTALVDRYITFDALDPT---DTALKLSLISQEI 83 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-~~~~~~~~~i~~Dl~d~~---~~~~~~~~~~~~~ 83 (211)
.+++|||+||+|.+|...++.+. ..|.+|+++ +++.+.. ...-+.. . .| .+.+ .+.+...+. .+
T Consensus 150 ~g~~VlV~Ga~g~iG~~~~q~a~-----~~Ga~Vi~~-~~~~~~~~~~~lGa~-~--i~-~~~~~~~~~~~~~~~~--g~ 217 (343)
T 3gaz_A 150 DGQTVLIQGGGGGVGHVAIQIAL-----ARGARVFAT-ARGSDLEYVRDLGAT-P--ID-ASREPEDYAAEHTAGQ--GF 217 (343)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEE-ECHHHHHHHHHHTSE-E--EE-TTSCHHHHHHHHHTTS--CE
T ss_pred CCCEEEEecCCCHHHHHHHHHHH-----HCCCEEEEE-eCHHHHHHHHHcCCC-E--ec-cCCCHHHHHHHHhcCC--Cc
Confidence 35789999999999999999888 688999988 5544311 1122445 4 45 3322 222222221 27
Q ss_pred ceEEeecc
Q 028258 84 TNLFWVPL 91 (211)
Q Consensus 84 ~~v~~~a~ 91 (211)
|.+|.+++
T Consensus 218 D~vid~~g 225 (343)
T 3gaz_A 218 DLVYDTLG 225 (343)
T ss_dssp EEEEESSC
T ss_pred eEEEECCC
Confidence 88988886
|
| >4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A* | Back alignment and structure |
|---|
Probab=95.46 E-value=0.063 Score=44.46 Aligned_cols=66 Identities=15% Similarity=0.192 Sum_probs=44.6
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCC-CHHHHHHHHHhcccccceEE
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDAL-DPTDTALKLSLISQEITNLF 87 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~-d~~~~~~~~~~~~~~~~~v~ 87 (211)
|+|+|+| +|..|..++..+. +.||+|++++.++...... -.-+ ++..|.. |.+.+....++ +|.|+
T Consensus 2 K~I~ilG-gg~~g~~~~~~Ak-----~~G~~vv~vd~~~~~~~~~-~aD~-~~~~~~~~d~~~~~~~~~~----~D~v~ 68 (363)
T 4ffl_A 2 KTICLVG-GKLQGFEAAYLSK-----KAGMKVVLVDKNPQALIRN-YADE-FYCFDVIKEPEKLLELSKR----VDAVL 68 (363)
T ss_dssp CEEEEEC-CSHHHHHHHHHHH-----HTTCEEEEEESCTTCTTTT-TSSE-EEECCTTTCHHHHHHHHTS----SSEEE
T ss_pred CEEEEEC-CCHHHHHHHHHHH-----HCCCEEEEEeCCCCChhHh-hCCE-EEECCCCcCHHHHHHHhcC----CCEEE
Confidence 8899998 7899999999988 7999999999877643211 1113 5566765 44444443333 56654
|
| >3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A | Back alignment and structure |
|---|
Probab=95.44 E-value=0.0049 Score=53.10 Aligned_cols=38 Identities=16% Similarity=0.074 Sum_probs=32.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
.+++|||+||+|.+|...++.+. ..|.+|+++++++.+
T Consensus 228 ~g~~VlV~GasG~vG~~avqlak-----~~Ga~vi~~~~~~~~ 265 (456)
T 3krt_A 228 QGDNVLIWGASGGLGSYATQFAL-----AGGANPICVVSSPQK 265 (456)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHH-----HTTCEEEEEESSHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-----HcCCeEEEEECCHHH
Confidence 35789999999999999999888 689999998876543
|
| >3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A | Back alignment and structure |
|---|
Probab=95.37 E-value=0.074 Score=43.63 Aligned_cols=57 Identities=18% Similarity=0.147 Sum_probs=42.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
.+|++.|+| .|-||+.+++.|. .-|++|++.+|++... ..+. ... ..+++.+.+++.
T Consensus 138 ~g~tvGIiG-~G~IG~~vA~~l~-----~~G~~V~~~dr~~~~~----~~~~-~~~----~~~~l~ell~~a 194 (315)
T 3pp8_A 138 EEFSVGIMG-AGVLGAKVAESLQ-----AWGFPLRCWSRSRKSW----PGVE-SYV----GREELRAFLNQT 194 (315)
T ss_dssp TTCCEEEEC-CSHHHHHHHHHHH-----TTTCCEEEEESSCCCC----TTCE-EEE----SHHHHHHHHHTC
T ss_pred CCCEEEEEe-eCHHHHHHHHHHH-----HCCCEEEEEcCCchhh----hhhh-hhc----ccCCHHHHHhhC
Confidence 468899998 8999999999999 7899999999986642 2333 221 125677777764
|
| >4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A* | Back alignment and structure |
|---|
Probab=95.34 E-value=0.015 Score=46.83 Aligned_cols=35 Identities=17% Similarity=0.152 Sum_probs=30.9
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
.++|.|+| +|.+|+.++..|+ ..|++|++++|++.
T Consensus 4 ~~kV~VIG-aG~mG~~iA~~la-----~~G~~V~l~d~~~~ 38 (283)
T 4e12_A 4 ITNVTVLG-TGVLGSQIAFQTA-----FHGFAVTAYDINTD 38 (283)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHH-----HTTCEEEEECSSHH
T ss_pred CCEEEEEC-CCHHHHHHHHHHH-----hCCCeEEEEeCCHH
Confidence 47899998 6999999999999 68999999998765
|
| >1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=95.33 E-value=0.021 Score=46.10 Aligned_cols=35 Identities=17% Similarity=0.089 Sum_probs=30.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
.+|+++|+||+ .+|++++..|+ +.| +|++++|+.+
T Consensus 127 ~~k~vlV~GaG-giG~aia~~L~-----~~G-~V~v~~r~~~ 161 (287)
T 1nvt_A 127 KDKNIVIYGAG-GAARAVAFELA-----KDN-NIIIANRTVE 161 (287)
T ss_dssp CSCEEEEECCS-HHHHHHHHHHT-----SSS-EEEEECSSHH
T ss_pred CCCEEEEECch-HHHHHHHHHHH-----HCC-CEEEEECCHH
Confidence 46899999985 99999999999 688 9999998754
|
| >3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* | Back alignment and structure |
|---|
Probab=95.31 E-value=0.015 Score=48.64 Aligned_cols=77 Identities=12% Similarity=0.041 Sum_probs=47.7
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-CCCCCceeEEEeeCCCHHHHHHHHHhc-ccccc
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-FPTALVDRYITFDALDPTDTALKLSLI-SQEIT 84 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-~~~~~~~~~i~~Dl~d~~~~~~~~~~~-~~~~~ 84 (211)
..+++|||+||+|.+|...++.+. ..|.+|+++. ++.+.. ...-+.. . ..|..+.+ +.+.+..+ ...+|
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~-----~~Ga~Vi~~~-~~~~~~~~~~lGa~-~-vi~~~~~~-~~~~v~~~t~g~~d 233 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLR-----LSGYIPIATC-SPHNFDLAKSRGAE-E-VFDYRAPN-LAQTIRTYTKNNLR 233 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHH-----HTTCEEEEEE-CGGGHHHHHHTTCS-E-EEETTSTT-HHHHHHHHTTTCCC
T ss_pred CCCcEEEEECCCcHHHHHHHHHHH-----HCCCEEEEEe-CHHHHHHHHHcCCc-E-EEECCCch-HHHHHHHHccCCcc
Confidence 346789999999999999999888 6889998886 333211 0112222 2 34555543 33333322 11278
Q ss_pred eEEeeccc
Q 028258 85 NLFWVPLQ 92 (211)
Q Consensus 85 ~v~~~a~~ 92 (211)
++|.+.+.
T Consensus 234 ~v~d~~g~ 241 (371)
T 3gqv_A 234 YALDCITN 241 (371)
T ss_dssp EEEESSCS
T ss_pred EEEECCCc
Confidence 88888764
|
| >2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C* | Back alignment and structure |
|---|
Probab=95.31 E-value=0.016 Score=48.13 Aligned_cols=33 Identities=24% Similarity=0.274 Sum_probs=26.8
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCC--CCcEEEEEeC
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPG--SPWKVYGAAR 46 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~--~g~~V~~~~R 46 (211)
.+|.|.||||++|+.+++.|.+ . ..++++++..
T Consensus 4 ~kV~I~GAtG~iG~~llr~L~~----~~~p~~elv~i~s 38 (336)
T 2r00_A 4 FNVAIFGATGAVGETMLEVLQE----REFPVDELFLLAS 38 (336)
T ss_dssp EEEEEETTTSHHHHHHHHHHHH----TTCCEEEEEEEEC
T ss_pred cEEEEECCCCHHHHHHHHHHhc----CCCCCEEEEEEEC
Confidence 5799999999999999999984 2 3567777763
|
| >4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans} | Back alignment and structure |
|---|
Probab=95.30 E-value=0.012 Score=47.99 Aligned_cols=38 Identities=18% Similarity=0.198 Sum_probs=28.3
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
.|.++|-++| -|.+|+.+++.|+ +.||+|++.+|++.+
T Consensus 3 ~Ms~kIgfIG-LG~MG~~mA~~L~-----~~G~~V~v~dr~~~~ 40 (297)
T 4gbj_A 3 AMSEKIAFLG-LGNLGTPIAEILL-----EAGYELVVWNRTASK 40 (297)
T ss_dssp -CCCEEEEEC-CSTTHHHHHHHHH-----HTTCEEEEC------
T ss_pred CCCCcEEEEe-cHHHHHHHHHHHH-----HCCCeEEEEeCCHHH
Confidence 3557799998 8999999999999 699999999998765
|
| >1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A* | Back alignment and structure |
|---|
Probab=95.30 E-value=0.058 Score=45.27 Aligned_cols=34 Identities=15% Similarity=0.153 Sum_probs=24.8
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCc---EEEEEeCC
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPW---KVYGAARR 47 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~---~V~~~~R~ 47 (211)
++|.|.||||++|+.++++|+. +.++ +++.+..+
T Consensus 2 ~kVaIvGAtG~vG~~llr~ll~----~~~~~~v~i~~~~~~ 38 (367)
T 1t4b_A 2 QNVGFIGWRGMVGSVLMQRMVE----ERDFDAIRPVFFSTS 38 (367)
T ss_dssp CEEEEESTTSHHHHHHHHHHHH----TTGGGGSEEEEEESS
T ss_pred cEEEEECCCCHHHHHHHHHHHh----cCCCCeEEEEEEEeC
Confidence 4799999999999999994442 3443 46666554
|
| >1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A* | Back alignment and structure |
|---|
Probab=95.28 E-value=0.021 Score=45.22 Aligned_cols=75 Identities=12% Similarity=0.118 Sum_probs=47.3
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-CCCCCceeEEEeeCCCHHHHHHHHHhcc-cccceEEe
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-FPTALVDRYITFDALDPTDTALKLSLIS-QEITNLFW 88 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-~~~~~~~~~i~~Dl~d~~~~~~~~~~~~-~~~~~v~~ 88 (211)
+|.|+|++|.+|+.+++.+.+ ..++++.++..+..... ...... -+..|++.++.+.+.+..+. ..+++|+-
T Consensus 2 kV~V~Ga~G~mG~~i~~~~~~----~~~~elva~~d~~~dl~~~~~~~~--DvvIDfT~p~a~~~~~~~a~~~g~~~Vig 75 (245)
T 1p9l_A 2 RVGVLGAKGKVGTTMVRAVAA----ADDLTLSAELDAGDPLSLLTDGNT--EVVIDFTHPDVVMGNLEFLIDNGIHAVVG 75 (245)
T ss_dssp EEEEETTTSHHHHHHHHHHHH----CTTCEEEEEECTTCCTHHHHHTTC--CEEEECSCTTTHHHHHHHHHHTTCEEEEC
T ss_pred EEEEECCCCHHHHHHHHHHHh----CCCCEEEEEEccCCCHHHHhccCC--cEEEEccChHHHHHHHHHHHHcCCCEEEc
Confidence 689999999999999999874 45899876654433211 001122 35688998877665554321 12556655
Q ss_pred ecc
Q 028258 89 VPL 91 (211)
Q Consensus 89 ~a~ 91 (211)
..+
T Consensus 76 TTG 78 (245)
T 1p9l_A 76 TTG 78 (245)
T ss_dssp CCC
T ss_pred CCC
Confidence 554
|
| >3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae} | Back alignment and structure |
|---|
Probab=95.26 E-value=0.02 Score=49.31 Aligned_cols=42 Identities=21% Similarity=0.187 Sum_probs=34.2
Q ss_pred CccccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCC
Q 028258 1 MEKQDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (211)
Q Consensus 1 ~~~~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~ 48 (211)
|..+++..+|+|+|+|. |..|.++++.|. +.|++|.+.++++
T Consensus 1 m~~~~~~~~k~v~viG~-G~sG~s~A~~l~-----~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 1 MKTITTFENKKVLVLGL-ARSGEAAARLLA-----KLGAIVTVNDGKP 42 (451)
T ss_dssp ---CCTTTTCEEEEECC-TTTHHHHHHHHH-----HTTCEEEEEESSC
T ss_pred CcchhhcCCCEEEEEee-CHHHHHHHHHHH-----hCCCEEEEEeCCc
Confidence 66666666799999997 889999999999 7999999999865
|
| >3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A* | Back alignment and structure |
|---|
Probab=95.26 E-value=0.021 Score=45.84 Aligned_cols=36 Identities=33% Similarity=0.257 Sum_probs=31.8
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
+++++|+|+ |..|++++..|. +.|.+|++++|++++
T Consensus 118 ~k~vlvlGa-GGaaraia~~L~-----~~G~~v~V~nRt~~k 153 (269)
T 3phh_A 118 YQNALILGA-GGSAKALACELK-----KQGLQVSVLNRSSRG 153 (269)
T ss_dssp CCEEEEECC-SHHHHHHHHHHH-----HTTCEEEEECSSCTT
T ss_pred CCEEEEECC-CHHHHHHHHHHH-----HCCCEEEEEeCCHHH
Confidence 688999995 999999999999 577889999998775
|
| >1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A* | Back alignment and structure |
|---|
Probab=95.22 E-value=0.014 Score=46.72 Aligned_cols=37 Identities=22% Similarity=0.207 Sum_probs=31.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
..|+++|+|+ |.+|++++..|+ +.|.+|++++|++++
T Consensus 118 ~~~~vlvlGa-Gg~g~a~a~~L~-----~~G~~v~v~~R~~~~ 154 (272)
T 1p77_A 118 PNQHVLILGA-GGATKGVLLPLL-----QAQQNIVLANRTFSK 154 (272)
T ss_dssp TTCEEEEECC-SHHHHTTHHHHH-----HTTCEEEEEESSHHH
T ss_pred CCCEEEEECC-cHHHHHHHHHHH-----HCCCEEEEEECCHHH
Confidence 4688999997 889999999999 577899999998653
|
| >2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=95.21 E-value=0.014 Score=47.07 Aligned_cols=34 Identities=24% Similarity=0.181 Sum_probs=29.9
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
++|.|+| .|.+|+.++..|. +.|++|++++|++.
T Consensus 4 m~i~iiG-~G~~G~~~a~~l~-----~~g~~V~~~~r~~~ 37 (316)
T 2ew2_A 4 MKIAIAG-AGAMGSRLGIMLH-----QGGNDVTLIDQWPA 37 (316)
T ss_dssp CEEEEEC-CSHHHHHHHHHHH-----HTTCEEEEECSCHH
T ss_pred CeEEEEC-cCHHHHHHHHHHH-----hCCCcEEEEECCHH
Confidence 4799999 5999999999999 68999999999764
|
| >2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum} | Back alignment and structure |
|---|
Probab=95.20 E-value=0.021 Score=47.09 Aligned_cols=37 Identities=24% Similarity=0.165 Sum_probs=31.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCc-EEEEEeCCCCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRPPP 50 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~-~V~~~~R~~~~ 50 (211)
|+++|.|+|| |.+|..++..|+ ..|+ +|+++++++..
T Consensus 13 ~~~kI~ViGa-G~vG~~iA~~la-----~~g~~~V~L~Di~~~~ 50 (328)
T 2hjr_A 13 MRKKISIIGA-GQIGSTIALLLG-----QKDLGDVYMFDIIEGV 50 (328)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHH-----HTTCCEEEEECSSTTH
T ss_pred CCCEEEEECC-CHHHHHHHHHHH-----hCCCCeEEEEECCHHH
Confidence 4568999997 999999999998 5777 89999997653
|
| >1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A* | Back alignment and structure |
|---|
Probab=95.19 E-value=0.027 Score=46.35 Aligned_cols=77 Identities=10% Similarity=-0.087 Sum_probs=49.7
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC----CCCCCceeEEEeeCCCHHHHHHHHHhcccc
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW----FPTALVDRYITFDALDPTDTALKLSLISQE 82 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~----~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~ 82 (211)
..+++++|+|++..+|+.+++.|+ ..|.+|+.++|+....+ ......+.......++++++.+.+.+
T Consensus 175 l~gk~vvVIG~G~iVG~~~A~~L~-----~~gAtVtv~nR~~~~l~~ra~~la~~~~~~t~~~~t~~~~L~e~l~~---- 245 (320)
T 1edz_A 175 LYGKKCIVINRSEIVGRPLAALLA-----NDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLD---- 245 (320)
T ss_dssp TTTCEEEEECCCTTTHHHHHHHHH-----TTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHHH----
T ss_pred CCCCEEEEECCCcchHHHHHHHHH-----HCCCEEEEEeCchHHHHhHHHHHhhhcccccccccccHhHHHHHhcc----
Confidence 357899999998899999999999 68889999988633211 01111120111222445677888877
Q ss_pred cceEEeeccc
Q 028258 83 ITNLFWVPLQ 92 (211)
Q Consensus 83 ~~~v~~~a~~ 92 (211)
.|.||.+.+.
T Consensus 246 ADIVIsAtg~ 255 (320)
T 1edz_A 246 SDVVITGVPS 255 (320)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEECCCC
Confidence 4667666554
|
| >4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=95.09 E-value=0.0072 Score=46.85 Aligned_cols=35 Identities=29% Similarity=0.393 Sum_probs=30.1
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEE-EeCCCCC
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYG-AARRPPP 50 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~-~~R~~~~ 50 (211)
++|.|+| +|.+|+++++.|. +.|++|++ .+|++++
T Consensus 24 mkI~IIG-~G~mG~~la~~l~-----~~g~~V~~v~~r~~~~ 59 (220)
T 4huj_A 24 TTYAIIG-AGAIGSALAERFT-----AAQIPAIIANSRGPAS 59 (220)
T ss_dssp CCEEEEE-CHHHHHHHHHHHH-----HTTCCEEEECTTCGGG
T ss_pred CEEEEEC-CCHHHHHHHHHHH-----hCCCEEEEEECCCHHH
Confidence 5789999 9999999999999 67899998 7787654
|
| >4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=95.08 E-value=0.016 Score=47.50 Aligned_cols=37 Identities=24% Similarity=0.297 Sum_probs=31.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
+.++|.|+| .|.+|+.+++.|+ +.|++|++++|++.+
T Consensus 30 ~~~~I~iIG-~G~mG~~~a~~l~-----~~G~~V~~~dr~~~~ 66 (320)
T 4dll_A 30 YARKITFLG-TGSMGLPMARRLC-----EAGYALQVWNRTPAR 66 (320)
T ss_dssp CCSEEEEEC-CTTTHHHHHHHHH-----HTTCEEEEECSCHHH
T ss_pred CCCEEEEEC-ccHHHHHHHHHHH-----hCCCeEEEEcCCHHH
Confidence 346899997 7999999999999 689999999998653
|
| >2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* | Back alignment and structure |
|---|
Probab=95.05 E-value=0.0057 Score=50.67 Aligned_cols=76 Identities=16% Similarity=0.092 Sum_probs=47.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCc-EEEEEeCCCCCCCC-CCCCceeEEEeeCCCHHHHHHHHHhcc--ccc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRPPPGWF-PTALVDRYITFDALDPTDTALKLSLIS--QEI 83 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~-~V~~~~R~~~~~~~-~~~~~~~~i~~Dl~d~~~~~~~~~~~~--~~~ 83 (211)
.+++|||+|| |.+|..+++.+. ..|+ +|++++|++.+... ..-+.. . ..|..+.+ +.+.+.... ..+
T Consensus 167 ~g~~VlV~Ga-G~vG~~~~q~a~-----~~Ga~~Vi~~~~~~~~~~~~~~~Ga~-~-~~~~~~~~-~~~~v~~~~~g~g~ 237 (348)
T 2d8a_A 167 SGKSVLITGA-GPLGLLGIAVAK-----ASGAYPVIVSEPSDFRRELAKKVGAD-Y-VINPFEED-VVKEVMDITDGNGV 237 (348)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHH-----HTTCCSEEEECSCHHHHHHHHHHTCS-E-EECTTTSC-HHHHHHHHTTTSCE
T ss_pred CCCEEEEECC-CHHHHHHHHHHH-----HcCCCEEEEECCCHHHHHHHHHhCCC-E-EECCCCcC-HHHHHHHHcCCCCC
Confidence 4578999999 999999999888 6888 89999987653210 111222 2 24555432 333333211 127
Q ss_pred ceEEeeccc
Q 028258 84 TNLFWVPLQ 92 (211)
Q Consensus 84 ~~v~~~a~~ 92 (211)
|.||.+++.
T Consensus 238 D~vid~~g~ 246 (348)
T 2d8a_A 238 DVFLEFSGA 246 (348)
T ss_dssp EEEEECSCC
T ss_pred CEEEECCCC
Confidence 889888763
|
| >7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A* | Back alignment and structure |
|---|
Probab=95.05 E-value=0.28 Score=41.19 Aligned_cols=101 Identities=9% Similarity=-0.023 Sum_probs=57.5
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEE--EeCCCC--C-----CCCCC---CCceeEEEeeCCCHHHHHHHH
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYG--AARRPP--P-----GWFPT---ALVDRYITFDALDPTDTALKL 76 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~--~~R~~~--~-----~~~~~---~~~~~~i~~Dl~d~~~~~~~~ 76 (211)
..+|.|+||+|.||.+++-.|+....-...-.|.. ++.... . ..+.+ +-.. .+.. .+ ...+.+
T Consensus 32 ~~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h~~~p~~~-~v~i--~~--~~y~~~ 106 (375)
T 7mdh_A 32 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLR-EVSI--GI--DPYEVF 106 (375)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEE-EEEE--ES--CHHHHT
T ss_pred CCEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHhHHhhhhhhcC-CcEE--ec--CCHHHh
Confidence 45799999999999999999973111011112444 333221 0 00111 1112 2221 11 123345
Q ss_pred HhcccccceEEeecccCC---chhHHHHhhcHHHHHHHHHHHHhc
Q 028258 77 SLISQEITNLFWVPLQVQ---ESEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 77 ~~~~~~~~~v~~~a~~~~---~~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
++ .|+|+.+++... .+..+....|...++.+.+.+.+.
T Consensus 107 ~d----aDvVVitag~prkpG~tR~DLl~~N~~I~k~i~~~i~~~ 147 (375)
T 7mdh_A 107 ED----VDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAV 147 (375)
T ss_dssp TT----CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CC----CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 55 577777887643 245677899999999999988864
|
| >2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=95.04 E-value=0.015 Score=50.62 Aligned_cols=43 Identities=16% Similarity=0.102 Sum_probs=33.6
Q ss_pred CccccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCC--CcEEEEEeCCCC
Q 028258 1 MEKQDQNPKSVALIIGVTGISGLSLAEALKNPTTPGS--PWKVYGAARRPP 49 (211)
Q Consensus 1 ~~~~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~--g~~V~~~~R~~~ 49 (211)
|+.+..+|.++|.|+| .|++|..++..|. +. |++|++++|++.
T Consensus 1 m~~~~~~~~mkI~VIG-~G~vG~~~A~~La-----~~g~g~~V~~~D~~~~ 45 (481)
T 2o3j_A 1 MTDQVFGKVSKVVCVG-AGYVGGPTCAMIA-----HKCPHITVTVVDMNTA 45 (481)
T ss_dssp --CCSSCCCCEEEEEC-CSTTHHHHHHHHH-----HHCTTSEEEEECSCHH
T ss_pred CCCCCCCCCCEEEEEC-CCHHHHHHHHHHH-----hcCCCCEEEEEECCHH
Confidence 5555545556899998 8999999999998 45 799999998765
|
| >4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A* | Back alignment and structure |
|---|
Probab=94.94 E-value=0.043 Score=48.46 Aligned_cols=68 Identities=19% Similarity=0.119 Sum_probs=52.2
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccceEEee
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITNLFWV 89 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~~~ 89 (211)
++++|.| .|-+|+++++.|. +.|++|+++++++...... .. ++.+|.+|++.+.++ +++. .+.++-+
T Consensus 349 ~~viIiG-~G~~G~~la~~L~-----~~g~~v~vid~d~~~~~~~---~~-~i~gD~t~~~~L~~a--gi~~-ad~vi~~ 415 (565)
T 4gx0_A 349 ELIFIIG-HGRIGCAAAAFLD-----RKPVPFILIDRQESPVCND---HV-VVYGDATVGQTLRQA--GIDR-ASGIIVT 415 (565)
T ss_dssp CCEEEEC-CSHHHHHHHHHHH-----HTTCCEEEEESSCCSSCCS---SC-EEESCSSSSTHHHHH--TTTS-CSEEEEC
T ss_pred CCEEEEC-CCHHHHHHHHHHH-----HCCCCEEEEECChHHHhhc---CC-EEEeCCCCHHHHHhc--Cccc-cCEEEEE
Confidence 6899998 5999999999999 6899999999988764311 26 999999999877664 3333 5666544
Q ss_pred c
Q 028258 90 P 90 (211)
Q Consensus 90 a 90 (211)
.
T Consensus 416 ~ 416 (565)
T 4gx0_A 416 T 416 (565)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=94.94 E-value=0.091 Score=42.75 Aligned_cols=90 Identities=13% Similarity=0.053 Sum_probs=54.5
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCc--EEEEEeCCCCCCC-----CC-----CCCceeEEEeeCCCHHHHHHHHHh
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPW--KVYGAARRPPPGW-----FP-----TALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~--~V~~~~R~~~~~~-----~~-----~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
+|.|+|| |.+|..++..|+ ..|+ +|+++++++.+.. .. ....+ .. . .+.+ ++++
T Consensus 2 kI~VIGa-G~vG~~la~~la-----~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~-i~-~--~~~~----a~~~ 67 (304)
T 2v6b_A 2 KVGVVGT-GFVGSTAAFALV-----LRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTR-VW-H--GGHS----ELAD 67 (304)
T ss_dssp EEEEECC-SHHHHHHHHHHH-----HTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCE-EE-E--ECGG----GGTT
T ss_pred EEEEECC-CHHHHHHHHHHH-----hCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeE-EE-E--CCHH----HhCC
Confidence 6899997 999999999998 5777 8999998754210 00 11223 22 2 1222 2444
Q ss_pred cccccceEEeecccCCc---hhHHHHhhcHHHHHHHHHHHHhc
Q 028258 79 ISQEITNLFWVPLQVQE---SEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 79 ~~~~~~~v~~~a~~~~~---~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
.|.|+.+++.... +..+....|....+.+++.+.+.
T Consensus 68 ----aDvVIi~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~ 106 (304)
T 2v6b_A 68 ----AQVVILTAGANQKPGESRLDLLEKNADIFRELVPQITRA 106 (304)
T ss_dssp ----CSEEEECC------------CHHHHHHHHHHHHHHHHHH
T ss_pred ----CCEEEEcCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHh
Confidence 5788877754321 22344567888888888888776
|
| >4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=94.92 E-value=0.024 Score=46.51 Aligned_cols=35 Identities=23% Similarity=0.191 Sum_probs=31.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCC-cEEEEEeCCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSP-WKVYGAARRP 48 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g-~~V~~~~R~~ 48 (211)
|.++|.|+| .|.+|+.++..|+ +.| ++|++++|++
T Consensus 23 M~m~IgvIG-~G~mG~~lA~~L~-----~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 23 MMTTIAFIG-FGEAAQSIAGGLG-----GRNAARLAAYDLRF 58 (317)
T ss_dssp SCCEEEEEC-CSHHHHHHHHHHH-----TTTCSEEEEECGGG
T ss_pred cCCeEEEEC-ccHHHHHHHHHHH-----HcCCCeEEEEeCCC
Confidence 457899998 8999999999999 689 9999999986
|
| >1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A* | Back alignment and structure |
|---|
Probab=94.90 E-value=0.031 Score=45.30 Aligned_cols=35 Identities=17% Similarity=0.214 Sum_probs=30.7
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
.++|.|+|+ |.+|+.++..|+ ..|++|++++|++.
T Consensus 15 ~~~I~VIG~-G~mG~~iA~~la-----~~G~~V~~~d~~~~ 49 (302)
T 1f0y_A 15 VKHVTVIGG-GLMGAGIAQVAA-----ATGHTVVLVDQTED 49 (302)
T ss_dssp CCEEEEECC-SHHHHHHHHHHH-----HTTCEEEEECSCHH
T ss_pred CCEEEEECC-CHHHHHHHHHHH-----hCCCeEEEEECCHH
Confidence 367999995 999999999999 68999999999754
|
| >3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=94.89 E-value=0.099 Score=44.00 Aligned_cols=34 Identities=12% Similarity=0.061 Sum_probs=25.5
Q ss_pred CCeEEEEcCCChHHHHHHH-HhhCCCCCCCC---cEEEEEeCC
Q 028258 9 KSVALIIGVTGISGLSLAE-ALKNPTTPGSP---WKVYGAARR 47 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~-~L~~~~~~~~g---~~V~~~~R~ 47 (211)
+.+|.|.||||++|+.|++ .|. +.. .++..++.+
T Consensus 4 ~~~VaIvGATG~vG~ellr~lL~-----~hp~~~~~l~~~ss~ 41 (377)
T 3uw3_A 4 SMNVGLVGWRGMVGSVLMQRMQE-----EGDFDLIEPVFFSTS 41 (377)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHH-----TTGGGGSEEEEEESS
T ss_pred CCEEEEECCCCHHHHHHHHHHHh-----hCCCCceEEEEEech
Confidence 4579999999999999999 666 344 456655543
|
| >3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B* | Back alignment and structure |
|---|
Probab=94.85 E-value=0.042 Score=44.36 Aligned_cols=37 Identities=16% Similarity=0.144 Sum_probs=31.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCc-EEEEEeCCCCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRPPP 50 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~-~V~~~~R~~~~ 50 (211)
.+|+++|+|+ |.+|++++..|. +.|. +|++++|++++
T Consensus 125 ~~k~vlvlGa-Gg~g~aia~~L~-----~~G~~~v~v~~R~~~~ 162 (281)
T 3o8q_A 125 KGATILLIGA-GGAARGVLKPLL-----DQQPASITVTNRTFAK 162 (281)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHH-----TTCCSEEEEEESSHHH
T ss_pred cCCEEEEECc-hHHHHHHHHHHH-----hcCCCeEEEEECCHHH
Confidence 4689999996 899999999999 6886 89999997653
|
| >3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=94.81 E-value=0.023 Score=46.31 Aligned_cols=36 Identities=25% Similarity=0.177 Sum_probs=31.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
+.++|.|+| .|.+|+.+++.|+ +.|++|++++|++.
T Consensus 8 ~~~~IgiIG-~G~mG~~~A~~l~-----~~G~~V~~~dr~~~ 43 (306)
T 3l6d_A 8 FEFDVSVIG-LGAMGTIMAQVLL-----KQGKRVAIWNRSPG 43 (306)
T ss_dssp CSCSEEEEC-CSHHHHHHHHHHH-----HTTCCEEEECSSHH
T ss_pred CCCeEEEEC-CCHHHHHHHHHHH-----HCCCEEEEEeCCHH
Confidence 346789997 8999999999999 68999999999865
|
| >2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=94.80 E-value=0.028 Score=48.72 Aligned_cols=87 Identities=14% Similarity=0.024 Sum_probs=54.5
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCc---EEEEEeCCCCCCCC-CCCCceeEEEeeCCCH--HH-HHHHHHhccc
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPW---KVYGAARRPPPGWF-PTALVDRYITFDALDP--TD-TALKLSLISQ 81 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~---~V~~~~R~~~~~~~-~~~~~~~~i~~Dl~d~--~~-~~~~~~~~~~ 81 (211)
+++|+|+| .|.||+.+++.|++ ..++ +|++.++....... ...+++ ++..++++. ++ +...+++
T Consensus 13 ~~rVlIIG-aGgVG~~va~lla~----~~dv~~~~I~vaD~~~~~~~~~~~~g~~-~~~~~Vdadnv~~~l~aLl~~--- 83 (480)
T 2ph5_A 13 KNRFVILG-FGCVGQALMPLIFE----KFDIKPSQVTIIAAEGTKVDVAQQYGVS-FKLQQITPQNYLEVIGSTLEE--- 83 (480)
T ss_dssp CSCEEEEC-CSHHHHHHHHHHHH----HBCCCGGGEEEEESSCCSCCHHHHHTCE-EEECCCCTTTHHHHTGGGCCT---
T ss_pred CCCEEEEC-cCHHHHHHHHHHHh----CCCCceeEEEEeccchhhhhHHhhcCCc-eeEEeccchhHHHHHHHHhcC---
Confidence 46799999 99999999999985 4555 58878765543211 112456 666666543 22 3334432
Q ss_pred ccceEEeecccCCchhHHHHhhcHHHHHHHHHHHHhc
Q 028258 82 EITNLFWVPLQVQESEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 82 ~~~~v~~~a~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
.|.|++++.... | ..++++|.++
T Consensus 84 -~DvVIN~s~~~~---------~----l~Im~aclea 106 (480)
T 2ph5_A 84 -NDFLIDVSIGIS---------S----LALIILCNQK 106 (480)
T ss_dssp -TCEEEECCSSSC---------H----HHHHHHHHHH
T ss_pred -CCEEEECCcccc---------C----HHHHHHHHHc
Confidence 378887663321 1 2478888887
|
| >3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A | Back alignment and structure |
|---|
Probab=94.78 E-value=0.03 Score=45.25 Aligned_cols=70 Identities=14% Similarity=0.034 Sum_probs=46.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCc-EEEEEeCCCCCCC-C------CCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRPPPGW-F------PTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~-~V~~~~R~~~~~~-~------~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
.+|+++|+|| |.+|++++..|. +.|. +|++++|++++.. + ..+.++ +...++.+ +.+.+.+
T Consensus 126 ~~k~vlVlGa-GG~g~aia~~L~-----~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~-i~~~~~~~---l~~~l~~- 194 (283)
T 3jyo_A 126 KLDSVVQVGA-GGVGNAVAYALV-----THGVQKLQVADLDTSRAQALADVINNAVGREA-VVGVDARG---IEDVIAA- 194 (283)
T ss_dssp CCSEEEEECC-SHHHHHHHHHHH-----HTTCSEEEEECSSHHHHHHHHHHHHHHHTSCC-EEEECSTT---HHHHHHH-
T ss_pred CCCEEEEECC-cHHHHHHHHHHH-----HCCCCEEEEEECCHHHHHHHHHHHHhhcCCce-EEEcCHHH---HHHHHhc-
Confidence 4689999997 899999999999 5787 6999999865421 0 012334 44455433 4444554
Q ss_pred ccccceEEeecc
Q 028258 80 SQEITNLFWVPL 91 (211)
Q Consensus 80 ~~~~~~v~~~a~ 91 (211)
.|.||++..
T Consensus 195 ---~DiVInaTp 203 (283)
T 3jyo_A 195 ---ADGVVNATP 203 (283)
T ss_dssp ---SSEEEECSS
T ss_pred ---CCEEEECCC
Confidence 577777753
|
| >2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* | Back alignment and structure |
|---|
Probab=94.77 E-value=0.026 Score=46.82 Aligned_cols=70 Identities=19% Similarity=0.173 Sum_probs=47.2
Q ss_pred CeEEEEcCCChHHHHH-HHHh-hCCCCCCCCcE-EEEEeCCCC---CCC-CCCCCceeEEEeeCCCHH--HHHHHHHhcc
Q 028258 10 SVALIIGVTGISGLSL-AEAL-KNPTTPGSPWK-VYGAARRPP---PGW-FPTALVDRYITFDALDPT--DTALKLSLIS 80 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l-~~~L-~~~~~~~~g~~-V~~~~R~~~---~~~-~~~~~~~~~i~~Dl~d~~--~~~~~~~~~~ 80 (211)
++|||+|| |.+|... ++.+ . ..|.+ |+++++++. +.. ...-+.+ .+ |..+.+ ++.+. .+
T Consensus 174 ~~VlV~Ga-G~vG~~a~iqla~k-----~~Ga~~Vi~~~~~~~~~~~~~~~~~lGa~-~v--~~~~~~~~~i~~~-~g-- 241 (357)
T 2b5w_A 174 SSAFVLGN-GSLGLLTLAMLKVD-----DKGYENLYCLGRRDRPDPTIDIIEELDAT-YV--DSRQTPVEDVPDV-YE-- 241 (357)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHC-----TTCCCEEEEEECCCSSCHHHHHHHHTTCE-EE--ETTTSCGGGHHHH-SC--
T ss_pred CEEEEECC-CHHHHHHHHHHHHH-----HcCCcEEEEEeCCcccHHHHHHHHHcCCc-cc--CCCccCHHHHHHh-CC--
Confidence 78999999 9999999 8877 6 68887 999999776 421 1123445 55 666432 23332 22
Q ss_pred cccceEEeeccc
Q 028258 81 QEITNLFWVPLQ 92 (211)
Q Consensus 81 ~~~~~v~~~a~~ 92 (211)
.+|+||.+.+.
T Consensus 242 -g~Dvvid~~g~ 252 (357)
T 2b5w_A 242 -QMDFIYEATGF 252 (357)
T ss_dssp -CEEEEEECSCC
T ss_pred -CCCEEEECCCC
Confidence 27889888763
|
| >3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=94.76 E-value=0.032 Score=44.32 Aligned_cols=64 Identities=13% Similarity=0.054 Sum_probs=42.6
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCc-EEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccceEEee
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITNLFWV 89 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~-~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~~~ 89 (211)
+++|+|+ |..|++++..|+ ..|. +|++++|++++.......+. .. +. +++.+.+++ .|.||++
T Consensus 110 ~vliiGa-Gg~a~ai~~~L~-----~~G~~~I~v~nR~~~ka~~la~~~~-~~--~~---~~~~~~~~~----aDiVIna 173 (253)
T 3u62_A 110 PVVVVGA-GGAARAVIYALL-----QMGVKDIWVVNRTIERAKALDFPVK-IF--SL---DQLDEVVKK----AKSLFNT 173 (253)
T ss_dssp SEEEECC-SHHHHHHHHHHH-----HTTCCCEEEEESCHHHHHTCCSSCE-EE--EG---GGHHHHHHT----CSEEEEC
T ss_pred eEEEECc-HHHHHHHHHHHH-----HcCCCEEEEEeCCHHHHHHHHHHcc-cC--CH---HHHHhhhcC----CCEEEEC
Confidence 7999995 999999999999 5787 79999998664211112233 22 22 234445554 5778876
Q ss_pred c
Q 028258 90 P 90 (211)
Q Consensus 90 a 90 (211)
.
T Consensus 174 t 174 (253)
T 3u62_A 174 T 174 (253)
T ss_dssp S
T ss_pred C
Confidence 5
|
| >2w70_A Biotin carboxylase; ligase, ATP-binding, fatty acid biosynthesis, nucleotide-BIN lipid synthesis, ATP-grAsp domain, fragment screening; HET: L22; 1.77A {Escherichia coli} PDB: 1bnc_A 2j9g_A* 2v58_A* 2v59_A* 2v5a_A* 2vr1_A* 2w6m_A* 1dv1_A* 2w6o_A* 2w6n_A* 2w6q_A* 2w6z_A* 2w6p_A* 2w71_A* 3jzf_A* 3jzi_A* 3rv3_A* 3rup_A* 1dv2_A* 3rv4_A* ... | Back alignment and structure |
|---|
Probab=94.75 E-value=0.022 Score=48.77 Aligned_cols=72 Identities=10% Similarity=-0.041 Sum_probs=47.3
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCC-CCCCceeEEEe-------eCCCHHHHHHHHHhcc
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF-PTALVDRYITF-------DALDPTDTALKLSLIS 80 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~-~~~~~~~~i~~-------Dl~d~~~~~~~~~~~~ 80 (211)
.|+|||+|+ |.+|..+++.+. +.|++|+++...+..... ..-.-+ .+.. |+.|.+.+.+.++...
T Consensus 2 ~k~ilI~g~-g~~~~~~~~a~~-----~~G~~vv~v~~~~~~~~~~~~~ad~-~~~~~p~~~~~~~~d~~~l~~~~~~~~ 74 (449)
T 2w70_A 2 LDKIVIANR-GEIALRILRACK-----ELGIKTVAVHSSADRDLKHVLLADE-TVCIGPAPSVKSYLNIPAIISAAEITG 74 (449)
T ss_dssp CSEEEECCC-HHHHHHHHHHHH-----HHTCEEEEEEEGGGTTCHHHHHSSE-EEEEECSSGGGTTTCHHHHHHHHHHHT
T ss_pred CceEEEeCC-cHHHHHHHHHHH-----HcCCeEEEEeccccccCchhhhCCE-EEEcCCCCccccccCHHHHHHHHHHcC
Confidence 478999995 799999999999 689999888654332110 000012 3333 7778787777776543
Q ss_pred cccceEEee
Q 028258 81 QEITNLFWV 89 (211)
Q Consensus 81 ~~~~~v~~~ 89 (211)
+|.|+..
T Consensus 75 --~d~v~~~ 81 (449)
T 2w70_A 75 --AVAIHPG 81 (449)
T ss_dssp --CCEEECC
T ss_pred --CCEEEEC
Confidence 6776543
|
| >3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=94.71 E-value=0.029 Score=44.08 Aligned_cols=37 Identities=27% Similarity=0.330 Sum_probs=32.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
++++|.|+| +|.+|++++..|+ +.|++|++.+|++.+
T Consensus 18 ~~~kIgiIG-~G~mG~alA~~L~-----~~G~~V~~~~r~~~~ 54 (245)
T 3dtt_A 18 QGMKIAVLG-TGTVGRTMAGALA-----DLGHEVTIGTRDPKA 54 (245)
T ss_dssp -CCEEEEEC-CSHHHHHHHHHHH-----HTTCEEEEEESCHHH
T ss_pred CCCeEEEEC-CCHHHHHHHHHHH-----HCCCEEEEEeCChhh
Confidence 467899997 9999999999999 689999999998654
|
| >3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A | Back alignment and structure |
|---|
Probab=94.70 E-value=0.11 Score=43.57 Aligned_cols=31 Identities=13% Similarity=0.115 Sum_probs=23.6
Q ss_pred eEEEEcCCChHHHHHHH-HhhCCCCCCCC---cEEEEEeC
Q 028258 11 VALIIGVTGISGLSLAE-ALKNPTTPGSP---WKVYGAAR 46 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~-~L~~~~~~~~g---~~V~~~~R 46 (211)
+|.|.||||++|+.+++ .|. +.. .++..++.
T Consensus 2 ~VaIvGATG~vG~ellr~lL~-----~hp~~~~~l~~~ss 36 (370)
T 3pzr_A 2 RVGLVGWRGMVGSVLMQRMVE-----ERDFDLIEPVFFST 36 (370)
T ss_dssp EEEEESCSSHHHHHHHHHHHH-----TTGGGGSEEEEEES
T ss_pred EEEEECCCCHHHHHHHHHHHh-----cCCCCceEEEEEec
Confidence 58899999999999999 666 344 35665543
|
| >2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A* | Back alignment and structure |
|---|
Probab=94.69 E-value=0.015 Score=51.09 Aligned_cols=36 Identities=31% Similarity=0.273 Sum_probs=28.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
.+|+++|||| |.+|++++..|+ +.|++|++++|+..
T Consensus 363 ~~k~vlV~Ga-GGig~aia~~L~-----~~G~~V~i~~R~~~ 398 (523)
T 2o7s_A 363 ASKTVVVIGA-GGAGKALAYGAK-----EKGAKVVIANRTYE 398 (523)
T ss_dssp ---CEEEECC-SHHHHHHHHHHH-----HHCC-CEEEESSHH
T ss_pred CCCEEEEECC-cHHHHHHHHHHH-----HCCCEEEEEECCHH
Confidence 4578999998 799999999999 68889999999754
|
| >1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=94.66 E-value=0.012 Score=48.66 Aligned_cols=75 Identities=19% Similarity=-0.019 Sum_probs=46.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-CCCCCceeEEEeeCCC-H---HHHHHHHH---hc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-FPTALVDRYITFDALD-P---TDTALKLS---LI 79 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-~~~~~~~~~i~~Dl~d-~---~~~~~~~~---~~ 79 (211)
.+++|||+|| |.+|...++.+. ..|.+|+++++++.+.. ...-+.. . ..|..+ . +.+.+... +-
T Consensus 168 ~g~~VlV~Ga-G~vG~~a~qla~-----~~Ga~Vi~~~~~~~~~~~~~~lGa~-~-~~~~~~~~~~~~~i~~~~~~~~g~ 239 (352)
T 1e3j_A 168 LGTTVLVIGA-GPIGLVSVLAAK-----AYGAFVVCTARSPRRLEVAKNCGAD-V-TLVVDPAKEEESSIIERIRSAIGD 239 (352)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHTTCS-E-EEECCTTTSCHHHHHHHHHHHSSS
T ss_pred CCCEEEEECC-CHHHHHHHHHHH-----HcCCEEEEEcCCHHHHHHHHHhCCC-E-EEcCcccccHHHHHHHHhccccCC
Confidence 3578999997 999999998887 68889999988765321 0111222 2 234443 2 23333332 11
Q ss_pred ccccceEEeeccc
Q 028258 80 SQEITNLFWVPLQ 92 (211)
Q Consensus 80 ~~~~~~v~~~a~~ 92 (211)
.+|++|.+++.
T Consensus 240 --g~D~vid~~g~ 250 (352)
T 1e3j_A 240 --LPNVTIDCSGN 250 (352)
T ss_dssp --CCSEEEECSCC
T ss_pred --CCCEEEECCCC
Confidence 27899888763
|
| >3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp} | Back alignment and structure |
|---|
Probab=94.63 E-value=0.023 Score=46.39 Aligned_cols=35 Identities=14% Similarity=0.083 Sum_probs=29.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCc-EEEEEeCCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRP 48 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~-~V~~~~R~~ 48 (211)
..++|.|+| .|.+|+.+++.|. +.|+ +|++++|++
T Consensus 23 ~~~~I~iIG-~G~mG~~~A~~L~-----~~G~~~V~~~dr~~ 58 (312)
T 3qsg_A 23 NAMKLGFIG-FGEAASAIASGLR-----QAGAIDMAAYDAAS 58 (312)
T ss_dssp --CEEEEEC-CSHHHHHHHHHHH-----HHSCCEEEEECSSC
T ss_pred CCCEEEEEC-ccHHHHHHHHHHH-----HCCCCeEEEEcCCC
Confidence 346899998 7999999999999 6899 999999973
|
| >3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus} | Back alignment and structure |
|---|
Probab=94.61 E-value=0.033 Score=45.58 Aligned_cols=34 Identities=26% Similarity=0.219 Sum_probs=29.8
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCC
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~ 48 (211)
+++|+|+| .|.+|+.++..|. ..|++|++++|++
T Consensus 2 ~mkI~IiG-aGaiG~~~a~~L~-----~~g~~V~~~~r~~ 35 (320)
T 3i83_A 2 SLNILVIG-TGAIGSFYGALLA-----KTGHCVSVVSRSD 35 (320)
T ss_dssp -CEEEEES-CCHHHHHHHHHHH-----HTTCEEEEECSTT
T ss_pred CCEEEEEC-cCHHHHHHHHHHH-----hCCCeEEEEeCCh
Confidence 46799997 7999999999999 5889999999975
|
| >3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=94.60 E-value=0.031 Score=45.52 Aligned_cols=36 Identities=22% Similarity=0.184 Sum_probs=31.6
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
+++|.|+| .|.+|+.+++.|+ +.|++|++++|++.+
T Consensus 21 m~~I~iIG-~G~mG~~~A~~l~-----~~G~~V~~~dr~~~~ 56 (310)
T 3doj_A 21 MMEVGFLG-LGIMGKAMSMNLL-----KNGFKVTVWNRTLSK 56 (310)
T ss_dssp SCEEEEEC-CSHHHHHHHHHHH-----HTTCEEEEECSSGGG
T ss_pred CCEEEEEC-ccHHHHHHHHHHH-----HCCCeEEEEeCCHHH
Confidence 35789998 8999999999999 689999999998764
|
| >2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus} | Back alignment and structure |
|---|
Probab=94.56 E-value=0.048 Score=44.32 Aligned_cols=37 Identities=19% Similarity=0.146 Sum_probs=31.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCc-EEEEEeCCCCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRPPP 50 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~-~V~~~~R~~~~ 50 (211)
..++++|+|+ |.+|+.++..|+ +.|. +|++++|++++
T Consensus 140 ~~~~vlVlGa-Gg~g~aia~~L~-----~~G~~~V~v~nR~~~k 177 (297)
T 2egg_A 140 DGKRILVIGA-GGGARGIYFSLL-----STAAERIDMANRTVEK 177 (297)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHH-----TTTCSEEEEECSSHHH
T ss_pred CCCEEEEECc-HHHHHHHHHHHH-----HCCCCEEEEEeCCHHH
Confidence 4688999996 889999999999 6887 89999998643
|
| >2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1} | Back alignment and structure |
|---|
Probab=94.56 E-value=0.04 Score=42.22 Aligned_cols=58 Identities=14% Similarity=0.075 Sum_probs=40.1
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
+++|.|+| .|.+|+.++..|. +.|++|++++|++.. ....+ ++..-+- +..+.+.++.
T Consensus 19 ~~~I~iiG-~G~mG~~la~~l~-----~~g~~V~~~~~~~~~----~~~aD-~vi~av~-~~~~~~v~~~ 76 (209)
T 2raf_A 19 GMEITIFG-KGNMGQAIGHNFE-----IAGHEVTYYGSKDQA----TTLGE-IVIMAVP-YPALAALAKQ 76 (209)
T ss_dssp -CEEEEEC-CSHHHHHHHHHHH-----HTTCEEEEECTTCCC----SSCCS-EEEECSC-HHHHHHHHHH
T ss_pred CCEEEEEC-CCHHHHHHHHHHH-----HCCCEEEEEcCCHHH----hccCC-EEEEcCC-cHHHHHHHHH
Confidence 46799999 8999999999999 688999999997652 13344 4444443 4444444443
|
| >1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A* | Back alignment and structure |
|---|
Probab=94.55 E-value=0.026 Score=46.18 Aligned_cols=35 Identities=20% Similarity=0.229 Sum_probs=31.1
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
++||+||+|.+|...++.+. ..|.+|+++++++.+
T Consensus 153 ~VlV~Ga~G~vG~~~~q~a~-----~~Ga~vi~~~~~~~~ 187 (330)
T 1tt7_A 153 SVLVTGATGGVGGIAVSMLN-----KRGYDVVASTGNREA 187 (330)
T ss_dssp CEEEESTTSHHHHHHHHHHH-----HHTCCEEEEESSSST
T ss_pred eEEEECCCCHHHHHHHHHHH-----HCCCEEEEEeCCHHH
Confidence 79999999999999999887 678899999988654
|
| >1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=94.54 E-value=0.029 Score=45.85 Aligned_cols=73 Identities=14% Similarity=0.040 Sum_probs=44.3
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCC-CCCCceeEEEeeCCCHHHHHHHHHhcc-cccceEEe
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF-PTALVDRYITFDALDPTDTALKLSLIS-QEITNLFW 88 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~-~~~~~~~~i~~Dl~d~~~~~~~~~~~~-~~~~~v~~ 88 (211)
++||+||+|.+|...++.+. ..|.+|+++++++.+... ..-+.+ . ..|..+.+ .+.++.+. ..+|.+|.
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~-----~~Ga~vi~~~~~~~~~~~~~~lGa~-~-~i~~~~~~--~~~~~~~~~~~~d~vid 222 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLA-----KRGYTVEASTGKAAEHDYLRVLGAK-E-VLAREDVM--AERIRPLDKQRWAAAVD 222 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHH-----HTTCCEEEEESCTTCHHHHHHTTCS-E-EEECC-----------CCSCCEEEEEE
T ss_pred eEEEecCCCHHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHcCCc-E-EEecCCcH--HHHHHHhcCCcccEEEE
Confidence 79999999999999999887 688899999998664211 112233 2 23555432 11222221 12788888
Q ss_pred eccc
Q 028258 89 VPLQ 92 (211)
Q Consensus 89 ~a~~ 92 (211)
+++.
T Consensus 223 ~~g~ 226 (328)
T 1xa0_A 223 PVGG 226 (328)
T ss_dssp CSTT
T ss_pred CCcH
Confidence 8764
|
| >3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} | Back alignment and structure |
|---|
Probab=94.54 E-value=0.01 Score=49.49 Aligned_cols=75 Identities=11% Similarity=-0.047 Sum_probs=46.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-CCCCCceeEEEeeCCCHHHHHHHHHhcc--cccc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-FPTALVDRYITFDALDPTDTALKLSLIS--QEIT 84 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-~~~~~~~~~i~~Dl~d~~~~~~~~~~~~--~~~~ 84 (211)
.+++|||+| +|.+|...++.+. ..|.+|+++++++.+.. ...-+.. . ..| .+.+++.+.+.... ..+|
T Consensus 189 ~g~~VlV~G-~G~vG~~a~qla~-----~~Ga~Vi~~~~~~~~~~~~~~lGa~-~-vi~-~~~~~~~~~v~~~~~g~g~D 259 (363)
T 3uog_A 189 AGDRVVVQG-TGGVALFGLQIAK-----ATGAEVIVTSSSREKLDRAFALGAD-H-GIN-RLEEDWVERVYALTGDRGAD 259 (363)
T ss_dssp TTCEEEEES-SBHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHTCS-E-EEE-TTTSCHHHHHHHHHTTCCEE
T ss_pred CCCEEEEEC-CCHHHHHHHHHHH-----HcCCEEEEEecCchhHHHHHHcCCC-E-EEc-CCcccHHHHHHHHhCCCCce
Confidence 357899999 8999999998887 68899999998765321 0111223 2 234 33222333332211 1278
Q ss_pred eEEeecc
Q 028258 85 NLFWVPL 91 (211)
Q Consensus 85 ~v~~~a~ 91 (211)
+||.+++
T Consensus 260 ~vid~~g 266 (363)
T 3uog_A 260 HILEIAG 266 (363)
T ss_dssp EEEEETT
T ss_pred EEEECCC
Confidence 9999887
|
| >1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A* | Back alignment and structure |
|---|
Probab=94.53 E-value=0.04 Score=43.87 Aligned_cols=34 Identities=29% Similarity=0.354 Sum_probs=30.2
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
+|.|+|+ |.+|+.++..|. +.|++|++++|++.+
T Consensus 2 ~i~iiG~-G~~G~~~a~~l~-----~~g~~V~~~~r~~~~ 35 (291)
T 1ks9_A 2 KITVLGC-GALGQLWLTALC-----KQGHEVQGWLRVPQP 35 (291)
T ss_dssp EEEEECC-SHHHHHHHHHHH-----HTTCEEEEECSSCCS
T ss_pred eEEEECc-CHHHHHHHHHHH-----hCCCCEEEEEcCccc
Confidence 5899995 999999999999 689999999998754
|
| >2qk4_A Trifunctional purine biosynthetic protein adenosi; purine synthesis, enzyme, protein-ATP complex, structural GE structural genomics consortium, SGC; HET: ATP; 2.45A {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.48 E-value=0.091 Score=44.96 Aligned_cols=74 Identities=19% Similarity=-0.015 Sum_probs=46.0
Q ss_pred CCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccce
Q 028258 6 QNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITN 85 (211)
Q Consensus 6 ~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~ 85 (211)
++|+++|||+|+. ....++++.|.+ +.|++++.++....... ...... .+..|..|.+.+.+.++..+ +|.
T Consensus 21 ~~m~~~IlIlG~g-~r~~al~~~~a~----~~g~~~v~~~~~~~~~~-~~~~~~-~~~~~~~d~~~l~~~~~~~~--~d~ 91 (452)
T 2qk4_A 21 QSMAARVLIIGSG-GREHTLAWKLAQ----SHHVKQVLVAPGNAGTA-CSEKIS-NTAISISDHTALAQFCKEKK--IEF 91 (452)
T ss_dssp -CCSEEEEEEECS-HHHHHHHHHHTT----CTTEEEEEEEECCGGGS-BSSSEE-ECCCCSSCHHHHHHHHHHHT--CCE
T ss_pred cccCcEEEEECCC-HHHHHHHHHHHh----cCCCCEEEEECCChhhh-hhcccc-ccccCCCCHHHHHHHHHHcC--CCE
Confidence 3456789999965 344557777774 57888665654332211 112233 45678889888888776654 677
Q ss_pred EEe
Q 028258 86 LFW 88 (211)
Q Consensus 86 v~~ 88 (211)
|+.
T Consensus 92 V~~ 94 (452)
T 2qk4_A 92 VVV 94 (452)
T ss_dssp EEE
T ss_pred EEE
Confidence 653
|
| >3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=94.45 E-value=0.031 Score=45.30 Aligned_cols=35 Identities=23% Similarity=0.309 Sum_probs=30.8
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
+++|.|+| .|.+|+.++..|+ +.|++|++++|++.
T Consensus 7 ~~~I~iIG-~G~mG~~~a~~l~-----~~G~~V~~~dr~~~ 41 (303)
T 3g0o_A 7 DFHVGIVG-LGSMGMGAARSCL-----RAGLSTWGADLNPQ 41 (303)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHH-----HTTCEEEEECSCHH
T ss_pred CCeEEEEC-CCHHHHHHHHHHH-----HCCCeEEEEECCHH
Confidence 46789997 8999999999999 68999999999754
|
| >1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=94.45 E-value=0.014 Score=48.74 Aligned_cols=74 Identities=11% Similarity=0.017 Sum_probs=48.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCC-CCCCceeEEEeeCCCHHHHHHHHHhcccccceE
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF-PTALVDRYITFDALDPTDTALKLSLISQEITNL 86 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~-~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v 86 (211)
.+.+|||+|| |.+|...++.+. ..|.+|+++++++.+... ..-+.. . ..|..+.+.+.+.. . .+|+|
T Consensus 194 ~g~~VlV~Ga-G~vG~~aiqlak-----~~Ga~Vi~~~~~~~~~~~a~~lGa~-~-vi~~~~~~~~~~~~---~-g~Dvv 261 (369)
T 1uuf_A 194 PGKKVGVVGI-GGLGHMGIKLAH-----AMGAHVVAFTTSEAKREAAKALGAD-E-VVNSRNADEMAAHL---K-SFDFI 261 (369)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHH-----HTTCEEEEEESSGGGHHHHHHHTCS-E-EEETTCHHHHHTTT---T-CEEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHcCCc-E-EeccccHHHHHHhh---c-CCCEE
Confidence 3578999997 889999998887 688999999987664211 111222 2 34666654332222 1 27888
Q ss_pred EeecccC
Q 028258 87 FWVPLQV 93 (211)
Q Consensus 87 ~~~a~~~ 93 (211)
|.+++..
T Consensus 262 id~~g~~ 268 (369)
T 1uuf_A 262 LNTVAAP 268 (369)
T ss_dssp EECCSSC
T ss_pred EECCCCH
Confidence 8887653
|
| >2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A* | Back alignment and structure |
|---|
Probab=94.43 E-value=0.065 Score=44.84 Aligned_cols=41 Identities=24% Similarity=0.246 Sum_probs=33.2
Q ss_pred cccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 3 KQDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 3 ~~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
.|.+++...|+|+| .|..|..++..|. ..|++|+++.|++.
T Consensus 20 ~M~~~~~~dV~IVG-aG~aGl~~A~~L~-----~~G~~v~v~E~~~~ 60 (398)
T 2xdo_A 20 HMNLLSDKNVAIIG-GGPVGLTMAKLLQ-----QNGIDVSVYERDND 60 (398)
T ss_dssp ---CCTTCEEEEEC-CSHHHHHHHHHHH-----TTTCEEEEEECSSS
T ss_pred cccccCCCCEEEEC-CCHHHHHHHHHHH-----HCCCCEEEEeCCCC
Confidence 45555667899998 7999999999999 68999999998764
|
| >3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* | Back alignment and structure |
|---|
Probab=94.43 E-value=0.014 Score=47.99 Aligned_cols=75 Identities=13% Similarity=0.078 Sum_probs=45.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCC-CCCCceeEEEeeCCCHHHHHHHHHhcccccceE
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF-PTALVDRYITFDALDPTDTALKLSLISQEITNL 86 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~-~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v 86 (211)
.++++||+|+ |.+|...++.+. ..|.+|+++++++.+... ..-+.. . ..|..+.+..+...+... .+|.+
T Consensus 166 ~g~~VlV~Ga-G~vG~~a~qla~-----~~Ga~Vi~~~~~~~~~~~~~~lGa~-~-~i~~~~~~~~~~~~~~~g-~~d~v 236 (340)
T 3s2e_A 166 PGQWVVISGI-GGLGHVAVQYAR-----AMGLRVAAVDIDDAKLNLARRLGAE-V-AVNARDTDPAAWLQKEIG-GAHGV 236 (340)
T ss_dssp TTSEEEEECC-STTHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHTTCS-E-EEETTTSCHHHHHHHHHS-SEEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHH-----HCCCeEEEEeCCHHHHHHHHHcCCC-E-EEeCCCcCHHHHHHHhCC-CCCEE
Confidence 3578999997 889999998887 688999999987654210 112222 2 245554332222222111 27888
Q ss_pred Eeecc
Q 028258 87 FWVPL 91 (211)
Q Consensus 87 ~~~a~ 91 (211)
+.+++
T Consensus 237 id~~g 241 (340)
T 3s2e_A 237 LVTAV 241 (340)
T ss_dssp EESSC
T ss_pred EEeCC
Confidence 77765
|
| >4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A* | Back alignment and structure |
|---|
Probab=94.41 E-value=0.02 Score=50.58 Aligned_cols=62 Identities=11% Similarity=-0.015 Sum_probs=48.7
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-CCCC-CceeEEEeeCCCHHHHHHH
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-FPTA-LVDRYITFDALDPTDTALK 75 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-~~~~-~~~~~i~~Dl~d~~~~~~~ 75 (211)
.++.+++|.| .|-+|+.+++.|. +.|++|+++++++.... .... ++. ++.+|.++++.+.++
T Consensus 125 ~~~~hviI~G-~g~~g~~la~~L~-----~~~~~vvvid~~~~~~~~~~~~~~~~-~i~Gd~~~~~~L~~a 188 (565)
T 4gx0_A 125 DTRGHILIFG-IDPITRTLIRKLE-----SRNHLFVVVTDNYDQALHLEEQEGFK-VVYGSPTDAHVLAGL 188 (565)
T ss_dssp TCCSCEEEES-CCHHHHHHHHHTT-----TTTCCEEEEESCHHHHHHHHHSCSSE-EEESCTTCHHHHHHT
T ss_pred ccCCeEEEEC-CChHHHHHHHHHH-----HCCCCEEEEECCHHHHHHHHHhcCCe-EEEeCCCCHHHHHhc
Confidence 3467899998 6899999999999 68899999998765321 1123 788 999999999877664
|
| >3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=94.40 E-value=0.15 Score=42.03 Aligned_cols=37 Identities=32% Similarity=0.343 Sum_probs=33.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
.+|++.|+| .|.||+.+++.|. .-|++|++.+|++..
T Consensus 136 ~gktvGIiG-lG~IG~~vA~~l~-----~~G~~V~~~dr~~~~ 172 (324)
T 3evt_A 136 TGQQLLIYG-TGQIGQSLAAKAS-----ALGMHVIGVNTTGHP 172 (324)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHH-----HTTCEEEEEESSCCC
T ss_pred cCCeEEEEC-cCHHHHHHHHHHH-----hCCCEEEEECCCcch
Confidence 468999998 8999999999999 689999999998654
|
| >1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=94.36 E-value=0.012 Score=48.88 Aligned_cols=75 Identities=17% Similarity=0.059 Sum_probs=47.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCC-CcEEEEEeCCCCCCC-CCCCCceeEEEeeCCCHHHHHHHHHhcc-c-cc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGS-PWKVYGAARRPPPGW-FPTALVDRYITFDALDPTDTALKLSLIS-Q-EI 83 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~-g~~V~~~~R~~~~~~-~~~~~~~~~i~~Dl~d~~~~~~~~~~~~-~-~~ 83 (211)
.+++|||+|| |.+|...++.+. .. |.+|+++++++.+.. ...-+.+ . ..|..+. +.+.+..+. . .+
T Consensus 186 ~g~~VlV~Ga-G~vG~~avqlak-----~~~Ga~Vi~~~~~~~~~~~~~~lGa~-~-vi~~~~~--~~~~v~~~~~g~g~ 255 (359)
T 1h2b_A 186 PGAYVAIVGV-GGLGHIAVQLLK-----VMTPATVIALDVKEEKLKLAERLGAD-H-VVDARRD--PVKQVMELTRGRGV 255 (359)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHH-----HHCCCEEEEEESSHHHHHHHHHTTCS-E-EEETTSC--HHHHHHHHTTTCCE
T ss_pred CCCEEEEECC-CHHHHHHHHHHH-----HcCCCeEEEEeCCHHHHHHHHHhCCC-E-EEeccch--HHHHHHHHhCCCCC
Confidence 3578999999 899999998887 56 889999998765321 0112233 2 2466554 333333221 1 27
Q ss_pred ceEEeeccc
Q 028258 84 TNLFWVPLQ 92 (211)
Q Consensus 84 ~~v~~~a~~ 92 (211)
|++|.+++.
T Consensus 256 Dvvid~~G~ 264 (359)
T 1h2b_A 256 NVAMDFVGS 264 (359)
T ss_dssp EEEEESSCC
T ss_pred cEEEECCCC
Confidence 888888763
|
| >2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A | Back alignment and structure |
|---|
Probab=94.28 E-value=0.042 Score=44.95 Aligned_cols=35 Identities=17% Similarity=0.082 Sum_probs=30.4
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCc-EEEEEeCCCC
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRPP 49 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~-~V~~~~R~~~ 49 (211)
+++|.|+|| |.+|+.++..|+ ..|+ +|+++++++.
T Consensus 4 ~~kI~VIGa-G~~G~~ia~~la-----~~g~~~V~l~D~~~~ 39 (317)
T 2ewd_A 4 RRKIAVIGS-GQIGGNIAYIVG-----KDNLADVVLFDIAEG 39 (317)
T ss_dssp CCEEEEECC-SHHHHHHHHHHH-----HHTCCEEEEECSSSS
T ss_pred CCEEEEECC-CHHHHHHHHHHH-----hCCCceEEEEeCCch
Confidence 457999997 999999999999 5787 8999998765
|
| >3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=94.28 E-value=0.034 Score=47.97 Aligned_cols=34 Identities=18% Similarity=0.109 Sum_probs=30.5
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
++|.|+| +|++|..++..|. +.|++|++++|++.
T Consensus 3 mkI~VIG-~G~vG~~lA~~La-----~~G~~V~~~D~~~~ 36 (450)
T 3gg2_A 3 LDIAVVG-IGYVGLVSATCFA-----ELGANVRCIDTDRN 36 (450)
T ss_dssp CEEEEEC-CSHHHHHHHHHHH-----HTTCEEEEECSCHH
T ss_pred CEEEEEC-cCHHHHHHHHHHH-----hcCCEEEEEECCHH
Confidence 5789998 7999999999999 68999999999765
|
| >2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* | Back alignment and structure |
|---|
Probab=94.25 E-value=0.022 Score=47.25 Aligned_cols=74 Identities=12% Similarity=-0.054 Sum_probs=48.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC--CCCCCceeEEEeeCCCHHHHHHHHHhcccccce
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW--FPTALVDRYITFDALDPTDTALKLSLISQEITN 85 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~--~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~ 85 (211)
...++||+|+ |.+|...++.+. ..|.+|+++++++.+.. ...-+.+ . ..|..+.+.+.+... .+|+
T Consensus 180 ~g~~VlV~Ga-G~vG~~a~qlak-----~~Ga~Vi~~~~~~~~~~~~~~~lGa~-~-vi~~~~~~~~~~~~~----g~D~ 247 (357)
T 2cf5_A 180 PGLRGGILGL-GGVGHMGVKIAK-----AMGHHVTVISSSNKKREEALQDLGAD-D-YVIGSDQAKMSELAD----SLDY 247 (357)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHH-----HHTCEEEEEESSTTHHHHHHTTSCCS-C-EEETTCHHHHHHSTT----TEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHH-----HCCCeEEEEeCChHHHHHHHHHcCCc-e-eeccccHHHHHHhcC----CCCE
Confidence 4578999995 999999998887 57889999998766421 1012233 2 245556544433222 2788
Q ss_pred EEeecccC
Q 028258 86 LFWVPLQV 93 (211)
Q Consensus 86 v~~~a~~~ 93 (211)
||.+++..
T Consensus 248 vid~~g~~ 255 (357)
T 2cf5_A 248 VIDTVPVH 255 (357)
T ss_dssp EEECCCSC
T ss_pred EEECCCCh
Confidence 88887643
|
| >3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} | Back alignment and structure |
|---|
Probab=94.21 E-value=0.058 Score=44.72 Aligned_cols=78 Identities=17% Similarity=-0.043 Sum_probs=49.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcE-EEEEeCCCCCCCC---CCCCceeEEEeeCCCHHHHHHHHHhcc--c
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWK-VYGAARRPPPGWF---PTALVDRYITFDALDPTDTALKLSLIS--Q 81 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~-V~~~~R~~~~~~~---~~~~~~~~i~~Dl~d~~~~~~~~~~~~--~ 81 (211)
.+++|||+|| |.+|...++.+. ..|.+ |+++++++.+... ....+. ....|-.+.+++.+.+.... .
T Consensus 179 ~g~~VlV~Ga-G~vG~~aiqlak-----~~Ga~~Vi~~~~~~~~~~~a~~l~~~~~-~~~~~~~~~~~~~~~v~~~t~g~ 251 (363)
T 3m6i_A 179 LGDPVLICGA-GPIGLITMLCAK-----AAGACPLVITDIDEGRLKFAKEICPEVV-THKVERLSAEESAKKIVESFGGI 251 (363)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHH-----HTTCCSEEEEESCHHHHHHHHHHCTTCE-EEECCSCCHHHHHHHHHHHTSSC
T ss_pred CCCEEEEECC-CHHHHHHHHHHH-----HcCCCEEEEECCCHHHHHHHHHhchhcc-cccccccchHHHHHHHHHHhCCC
Confidence 3578999998 999999998887 68887 8888887654210 011222 22334344555555554432 1
Q ss_pred ccceEEeeccc
Q 028258 82 EITNLFWVPLQ 92 (211)
Q Consensus 82 ~~~~v~~~a~~ 92 (211)
.+|++|.+.+.
T Consensus 252 g~Dvvid~~g~ 262 (363)
T 3m6i_A 252 EPAVALECTGV 262 (363)
T ss_dssp CCSEEEECSCC
T ss_pred CCCEEEECCCC
Confidence 27899888763
|
| >2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A* | Back alignment and structure |
|---|
Probab=94.20 E-value=0.036 Score=45.41 Aligned_cols=35 Identities=17% Similarity=0.247 Sum_probs=29.9
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCC----cEEEEEeCCCC
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSP----WKVYGAARRPP 49 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g----~~V~~~~R~~~ 49 (211)
+++|.|+| .|.+|+.++..|. +.| ++|++++|++.
T Consensus 22 ~mkI~iIG-~G~mG~ala~~L~-----~~G~~~~~~V~v~~r~~~ 60 (322)
T 2izz_A 22 SMSVGFIG-AGQLAFALAKGFT-----AAGVLAAHKIMASSPDMD 60 (322)
T ss_dssp CCCEEEES-CSHHHHHHHHHHH-----HTTSSCGGGEEEECSCTT
T ss_pred CCEEEEEC-CCHHHHHHHHHHH-----HCCCCCcceEEEECCCcc
Confidence 45699999 6999999999999 577 88999999864
|
| >4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=94.20 E-value=0.037 Score=46.25 Aligned_cols=36 Identities=14% Similarity=0.079 Sum_probs=31.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
.+++|.|+| .|.+|+.+++.|+ +.|++|++++|++.
T Consensus 21 ~~mkIgiIG-lG~mG~~~A~~L~-----~~G~~V~v~dr~~~ 56 (358)
T 4e21_A 21 QSMQIGMIG-LGRMGADMVRRLR-----KGGHECVVYDLNVN 56 (358)
T ss_dssp -CCEEEEEC-CSHHHHHHHHHHH-----HTTCEEEEECSCHH
T ss_pred cCCEEEEEC-chHHHHHHHHHHH-----hCCCEEEEEeCCHH
Confidence 346899998 8999999999999 68999999999765
|
| >3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=94.19 E-value=0.051 Score=43.67 Aligned_cols=37 Identities=14% Similarity=0.020 Sum_probs=31.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCc-EEEEEeCCCCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRPPP 50 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~-~V~~~~R~~~~ 50 (211)
.+|+++|+|+ |.+|++++..|. +.|. +|++++|++++
T Consensus 119 ~~k~~lvlGa-Gg~~~aia~~L~-----~~G~~~v~i~~R~~~~ 156 (272)
T 3pwz_A 119 RNRRVLLLGA-GGAVRGALLPFL-----QAGPSELVIANRDMAK 156 (272)
T ss_dssp TTSEEEEECC-SHHHHHHHHHHH-----HTCCSEEEEECSCHHH
T ss_pred cCCEEEEECc-cHHHHHHHHHHH-----HcCCCEEEEEeCCHHH
Confidence 4689999996 899999999999 5785 89999997654
|
| >3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp} | Back alignment and structure |
|---|
Probab=94.13 E-value=0.2 Score=41.28 Aligned_cols=37 Identities=32% Similarity=0.350 Sum_probs=32.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
.++++.|+| .|-||+.+++.|. .-|++|++.+|++..
T Consensus 139 ~g~tvGIIG-lG~IG~~vA~~l~-----~~G~~V~~~dr~~~~ 175 (324)
T 3hg7_A 139 KGRTLLILG-TGSIGQHIAHTGK-----HFGMKVLGVSRSGRE 175 (324)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHH-----HTTCEEEEECSSCCC
T ss_pred ccceEEEEE-ECHHHHHHHHHHH-----hCCCEEEEEcCChHH
Confidence 468999998 9999999999999 689999999997643
|
| >2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A | Back alignment and structure |
|---|
Probab=94.12 E-value=0.17 Score=41.27 Aligned_cols=99 Identities=14% Similarity=0.027 Sum_probs=62.5
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----CC-----CCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----FP-----TALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----~~-----~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
++|.|+|| |.+|..++..|+.. .-..+|.++++++.+.. +. ...++ +.. | +.+ ++++
T Consensus 1 ~KI~IiGa-G~vG~~~a~~l~~~---~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~-v~~-~--~~~----a~~~- 67 (310)
T 2xxj_A 1 MKVGIVGS-GMVGSATAYALALL---GVAREVVLVDLDRKLAQAHAEDILHATPFAHPVW-VWA-G--SYG----DLEG- 67 (310)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHT---TCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCE-EEE-C--CGG----GGTT-
T ss_pred CEEEEECC-CHHHHHHHHHHHhC---CCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeE-EEE-C--CHH----HhCC-
Confidence 36899998 99999999999841 11257999998653210 00 12233 322 2 222 2454
Q ss_pred ccccceEEeecccCCc---hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceE
Q 028258 80 SQEITNLFWVPLQVQE---SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRH 127 (211)
Q Consensus 80 ~~~~~~v~~~a~~~~~---~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~ 127 (211)
.|+|+.+++.... +..+....|...++.+.+.+.+. ++...-
T Consensus 68 ---aD~Vii~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~---~p~a~i 112 (310)
T 2xxj_A 68 ---ARAVVLAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLEA---APEAVL 112 (310)
T ss_dssp ---EEEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH---CTTCEE
T ss_pred ---CCEEEECCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHH---CCCcEE
Confidence 5788888776432 33456677888888999998887 555443
|
| >2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.07 E-value=0.039 Score=44.84 Aligned_cols=35 Identities=17% Similarity=0.127 Sum_probs=30.6
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
++|.|+| .|.+|+.++..|. ..|++|++++|++.+
T Consensus 31 ~~I~iIG-~G~mG~~~a~~l~-----~~g~~V~~~~~~~~~ 65 (316)
T 2uyy_A 31 KKIGFLG-LGLMGSGIVSNLL-----KMGHTVTVWNRTAEK 65 (316)
T ss_dssp SCEEEEC-CSHHHHHHHHHHH-----HTTCCEEEECSSGGG
T ss_pred CeEEEEc-ccHHHHHHHHHHH-----hCCCEEEEEeCCHHH
Confidence 5799999 6999999999999 578999999987654
|
| >3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=94.06 E-value=0.046 Score=45.62 Aligned_cols=35 Identities=29% Similarity=0.187 Sum_probs=30.6
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
+++|.|+| +|.+|++++..|. +.|++|++++|++.
T Consensus 29 ~mkI~VIG-aG~mG~alA~~La-----~~G~~V~l~~r~~~ 63 (356)
T 3k96_A 29 KHPIAILG-AGSWGTALALVLA-----RKGQKVRLWSYESD 63 (356)
T ss_dssp CSCEEEEC-CSHHHHHHHHHHH-----TTTCCEEEECSCHH
T ss_pred CCeEEEEC-ccHHHHHHHHHHH-----HCCCeEEEEeCCHH
Confidence 35799998 6999999999999 68999999999754
|
| >3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri} | Back alignment and structure |
|---|
Probab=94.06 E-value=0.036 Score=44.63 Aligned_cols=35 Identities=23% Similarity=0.146 Sum_probs=30.3
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
+++|.|+| .|.+|+.++..|. ..|++|++++|++.
T Consensus 4 ~~~i~iiG-~G~~G~~~a~~l~-----~~g~~V~~~~~~~~ 38 (301)
T 3cky_A 4 SIKIGFIG-LGAMGKPMAINLL-----KEGVTVYAFDLMEA 38 (301)
T ss_dssp CCEEEEEC-CCTTHHHHHHHHH-----HTTCEEEEECSSHH
T ss_pred CCEEEEEC-ccHHHHHHHHHHH-----HCCCeEEEEeCCHH
Confidence 35799998 7999999999999 57899999998754
|
| >4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A | Back alignment and structure |
|---|
Probab=94.02 E-value=0.045 Score=46.79 Aligned_cols=38 Identities=16% Similarity=0.106 Sum_probs=32.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
.+++|||+||+|.||...++.+. ..|.+|+++++++.+
T Consensus 220 ~g~~VlV~GasG~iG~~a~qla~-----~~Ga~vi~~~~~~~~ 257 (447)
T 4a0s_A 220 QGDIVLIWGASGGLGSYAIQFVK-----NGGGIPVAVVSSAQK 257 (447)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHH-----HTTCEEEEEESSHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-----HcCCEEEEEeCCHHH
Confidence 36789999999999999998888 689999999876543
|
| >3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=94.00 E-value=0.044 Score=43.98 Aligned_cols=35 Identities=29% Similarity=0.258 Sum_probs=31.1
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
++|.|+| .|.+|+.+++.|. +.|++|++++|++.+
T Consensus 2 ~~i~iIG-~G~mG~~~a~~l~-----~~G~~V~~~dr~~~~ 36 (287)
T 3pef_A 2 QKFGFIG-LGIMGSAMAKNLV-----KAGCSVTIWNRSPEK 36 (287)
T ss_dssp CEEEEEC-CSHHHHHHHHHHH-----HTTCEEEEECSSGGG
T ss_pred CEEEEEe-ecHHHHHHHHHHH-----HCCCeEEEEcCCHHH
Confidence 5789998 7999999999999 689999999998764
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 211 | |||
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 99.96 | |
| d1t2aa_ | 347 | GDP-mannose 4,6-dehydratase {Human (Homo sapiens) | 99.93 | |
| d1udca_ | 338 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.93 | |
| d1z45a2 | 347 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.93 | |
| d1sb8a_ | 341 | UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo | 99.92 | |
| d1ek6a_ | 346 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.92 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 99.92 | |
| d1e6ua_ | 315 | GDP-4-keto-6-deoxy-d-mannose epimerase/reductase ( | 99.91 | |
| d1rpna_ | 321 | GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos | 99.91 | |
| d2b69a1 | 312 | UDP-glucuronate decarboxylase 1 {Human (Homo sapie | 99.91 | |
| d1n7ha_ | 339 | GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop | 99.91 | |
| d1kewa_ | 361 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.91 | |
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 99.9 | |
| d1oc2a_ | 346 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.89 | |
| d1r6da_ | 322 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces | 99.89 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 99.89 | |
| d1gy8a_ | 383 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.89 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 99.88 | |
| d2bkaa1 | 232 | TAT-interacting protein TIP30 {Human (Homo sapiens | 99.88 | |
| d2blla1 | 342 | Polymyxin resistance protein ArnA (PrmI) {Escheric | 99.87 | |
| d1orra_ | 338 | CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: | 99.84 | |
| d1y1pa1 | 342 | Aldehyde reductase II {Sporobolomyces salmonicolor | 99.84 | |
| d1vl0a_ | 281 | DTDP-4-dehydrorhamnose reductase RfbD {Clostridium | 99.83 | |
| d2a35a1 | 212 | Hypothetical protein PA4017 {Pseudomonas aeruginos | 99.81 | |
| d2q46a1 | 252 | Hypothetical protein At5g02240 (T7H20_290) {Thale | 99.78 | |
| d1n2sa_ | 298 | dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S | 99.74 | |
| d1qyda_ | 312 | Pinoresinol-lariciresinol reductase {Giant arborvi | 99.72 | |
| d1qyca_ | 307 | Phenylcoumaran benzylic ether reductase {Loblolly | 99.71 | |
| d1eq2a_ | 307 | ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric | 99.68 | |
| d1xgka_ | 350 | Negative transcriptional regulator NmrA {Aspergill | 99.63 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 99.61 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 99.6 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 99.59 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 99.56 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 99.56 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 99.55 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 99.54 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 99.54 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 99.53 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 99.53 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 99.53 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 99.53 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 99.52 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 99.52 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 99.52 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 99.52 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 99.52 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 99.52 | |
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 99.51 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 99.51 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 99.51 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 99.51 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 99.51 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 99.5 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 99.49 | |
| d2fr1a1 | 259 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 99.49 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 99.49 | |
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 99.48 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 99.48 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 99.48 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 99.48 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 99.47 | |
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 99.46 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 99.45 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 99.45 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 99.45 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 99.44 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 99.44 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 99.43 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 99.43 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 99.43 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 99.43 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 99.42 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 99.41 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 99.41 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 99.4 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 99.37 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 99.37 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 99.37 | |
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 99.34 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 99.33 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 99.29 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 99.29 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 99.25 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 99.24 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 99.19 | |
| d2o23a1 | 248 | Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho | 99.12 | |
| d1qsga_ | 258 | Enoyl-ACP reductase {Escherichia coli [TaxId: 562] | 99.02 | |
| d2pd4a1 | 274 | Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 | 99.01 | |
| d1luaa1 | 191 | Methylene-tetrahydromethanopterin dehydrogenase {M | 99.0 | |
| d1uaya_ | 241 | Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t | 98.99 | |
| d2h7ma1 | 268 | Enoyl-ACP reductase {Mycobacterium tuberculosis, T | 98.95 | |
| d1fjha_ | 257 | 3-alpha-hydroxysteroid dehydrogenase {Comamonas te | 98.78 | |
| d1d7oa_ | 297 | Enoyl-ACP reductase {Oil seed rape (Brassica napus | 98.74 | |
| d1e7wa_ | 284 | Dihydropteridin reductase (pteridine reductase) {L | 98.68 | |
| d1mxha_ | 266 | Dihydropteridin reductase (pteridine reductase) {T | 98.53 | |
| d1uh5a_ | 329 | Enoyl-ACP reductase {Malaria parasite (Plasmodium | 98.47 | |
| d1e5qa1 | 182 | Saccharopine reductase {Rice blast fungus (Magnapo | 97.88 | |
| d1mlda1 | 144 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 97.88 | |
| d1ldna1 | 148 | Lactate dehydrogenase {Bacillus stearothermophilus | 97.75 | |
| d1hyea1 | 145 | MJ0490, lactate/malate dehydrogenase {Archaeon Met | 97.72 | |
| d1lssa_ | 132 | Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax | 97.68 | |
| d1jaya_ | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae | 97.66 | |
| d2hmva1 | 134 | Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | 97.6 | |
| d1ez4a1 | 146 | Lactate dehydrogenase {Lactobacillus pentosus [Tax | 97.58 | |
| d2pv7a2 | 152 | Prephenate dehydrogenase TyrA {Haemophilus influen | 97.57 | |
| d1t4ba1 | 146 | Aspartate beta-semialdehyde dehydrogenase {Escheri | 97.54 | |
| d7mdha1 | 175 | Malate dehydrogenase {Sorghum (Sorghum vulgare), c | 97.49 | |
| d1y6ja1 | 142 | Lactate dehydrogenase {Clostridium thermocellum [T | 97.42 | |
| d1y7ta1 | 154 | Malate dehydrogenase {Thermus thermophilus [TaxId: | 97.33 | |
| d1pzga1 | 154 | Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5 | 97.29 | |
| d2ldxa1 | 159 | Lactate dehydrogenase {Mouse (Mus musculus) [TaxId | 97.28 | |
| d1o8ca2 | 77 | Hypothetical protein YhdH {Escherichia coli [TaxId | 97.26 | |
| d2cmda1 | 145 | Malate dehydrogenase {Escherichia coli [TaxId: 562 | 97.2 | |
| d1v3va2 | 182 | Leukotriene b4 12-hydroxydehydrogenase/prostagland | 97.17 | |
| d1yb5a2 | 174 | Quinone oxidoreductase {Human (Homo sapiens) [TaxI | 97.09 | |
| d1kjqa2 | 111 | Glycinamide ribonucleotide transformylase PurT, N- | 97.08 | |
| d1o6za1 | 142 | Malate dehydrogenase {Archaeon Haloarcula marismor | 97.05 | |
| d5mdha1 | 154 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 96.93 | |
| d1mb4a1 | 147 | Aspartate beta-semialdehyde dehydrogenase {Vibrio | 96.91 | |
| d1i0za1 | 160 | Lactate dehydrogenase {Human (Homo sapiens), heart | 96.91 | |
| d1iz0a2 | 171 | Quinone oxidoreductase {Thermus thermophilus [TaxI | 96.89 | |
| d1pqwa_ | 183 | Putative enoyl reductase domain of polyketide synt | 96.81 | |
| d1ks9a2 | 167 | Ketopantoate reductase PanE {Escherichia coli [Tax | 96.79 | |
| d2cvoa1 | 183 | Putative semialdehyde dehydrogenase {Rice (Oryza s | 96.79 | |
| d1u7za_ | 223 | Coenzyme A biosynthesis bifunctional protein CoaBC | 96.78 | |
| d1llda1 | 143 | Lactate dehydrogenase {Bifidobacterium longum, str | 96.77 | |
| d1xa0a2 | 176 | B. subtilis YhfP homologue {Bacillus stearothermop | 96.76 | |
| d1uxja1 | 142 | Malate dehydrogenase {Chloroflexus aurantiacus [Ta | 96.76 | |
| d1hyha1 | 146 | L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La | 96.76 | |
| d1guza1 | 142 | Malate dehydrogenase {Chlorobium vibrioforme [TaxI | 96.63 | |
| d1f0ya2 | 192 | Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum | 96.61 | |
| d2g17a1 | 179 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 96.59 | |
| d1qora2 | 179 | Quinone oxidoreductase {Escherichia coli [TaxId: 5 | 96.58 | |
| d1vkna1 | 176 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 96.56 | |
| d2jfga1 | 93 | UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase | 96.55 | |
| d1c0pa1 | 268 | D-aminoacid oxidase, N-terminal domain {Rhodotorul | 96.51 | |
| d1vi2a1 | 182 | Putative shikimate dehydrogenase YdiB {Escherichia | 96.48 | |
| d1tt7a2 | 167 | Hypothetical protein YhfP {Bacillus subtilis [TaxI | 96.46 | |
| d1gpja2 | 159 | Glutamyl tRNA-reductase middle domain {Archaeon Me | 96.39 | |
| d1yl7a1 | 135 | Dihydrodipicolinate reductase {Mycobacterium tuber | 96.37 | |
| d2hjsa1 | 144 | Usg-1 protein homolog PA3116 {Pseudomonas aerugino | 96.35 | |
| d1id1a_ | 153 | Rck domain from putative potassium channel Kch {Es | 96.34 | |
| d1a5za1 | 140 | Lactate dehydrogenase {Thermotoga maritima [TaxId: | 96.33 | |
| d1vm6a3 | 128 | Dihydrodipicolinate reductase {Thermotoga maritima | 96.32 | |
| d1o89a2 | 177 | Hypothetical protein YhdH {Escherichia coli [TaxId | 96.19 | |
| d2gz1a1 | 154 | Aspartate beta-semialdehyde dehydrogenase {Strepto | 96.04 | |
| d2f1ka2 | 165 | Prephenate dehydrogenase TyrA {Synechocystis sp. p | 96.0 | |
| d1t2da1 | 150 | Lactate dehydrogenase {Malaria parasite (Plasmodiu | 96.0 | |
| d1ojua1 | 142 | Malate dehydrogenase {Archaeon Archaeoglobus fulgi | 95.68 | |
| d2g5ca2 | 171 | Prephenate dehydrogenase TyrA {Aquifex aeolicus [T | 95.68 | |
| d1bg6a2 | 184 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A | 95.66 | |
| d1p3da1 | 96 | UDP-N-acetylmuramate-alanine ligase MurC {Haemophi | 95.65 | |
| d1uufa2 | 168 | Hypothetical protein YahK {Escherichia coli [TaxId | 95.64 | |
| d1v59a2 | 122 | Dihydrolipoamide dehydrogenase {Baker's yeast (Sac | 95.55 | |
| d1vj0a2 | 182 | Hypothetical protein TM0436 {Thermotoga maritima [ | 95.48 | |
| d3cuma2 | 162 | Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru | 95.47 | |
| d1a9xa4 | 121 | Carbamoyl phosphate synthetase (CPS), large subuni | 95.42 | |
| d1ebda2 | 117 | Dihydrolipoamide dehydrogenase {Bacillus stearothe | 95.41 | |
| d1n1ea2 | 189 | Glycerol-3- phosphate dehydrogenase {Trypanosome ( | 95.4 | |
| d1diha1 | 162 | Dihydrodipicolinate reductase {Escherichia coli [T | 95.38 | |
| d2fy8a1 | 129 | Potassium channel-related protein MthK {Archaeon M | 95.32 | |
| d1d7ya2 | 121 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 95.28 | |
| d1wdka3 | 186 | Fatty oxidation complex alpha subunit, middle doma | 95.12 | |
| d1jvba2 | 170 | Alcohol dehydrogenase {Archaeon Sulfolobus solfata | 95.12 | |
| d2d59a1 | 139 | Hypothetical protein PH1109 {Pyrococcus horikoshii | 95.09 | |
| d1onfa2 | 117 | Glutathione reductase {Plasmodium falciparum [TaxI | 95.08 | |
| d2csua1 | 129 | Acetate-CoA ligase alpha chain, AcdA, N-terminal d | 95.06 | |
| d1llua2 | 166 | Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax | 95.04 | |
| d1nhpa2 | 123 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 95.01 | |
| d1gesa2 | 116 | Glutathione reductase {Escherichia coli [TaxId: 56 | 94.91 | |
| d1a9xa3 | 127 | Carbamoyl phosphate synthetase (CPS), large subuni | 94.9 | |
| d3lada2 | 119 | Dihydrolipoamide dehydrogenase {Azotobacter vinela | 94.89 | |
| d1y81a1 | 116 | Hypothetical protein PF0725 {Pyrococcus furiosus [ | 94.89 | |
| d1e3ja2 | 170 | Ketose reductase (sorbitol dehydrogenase) {Silverl | 94.87 | |
| d2bi7a1 | 314 | UDP-galactopyranose mutase, N-terminal domain {Kle | 94.72 | |
| d1piwa2 | 168 | Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas | 94.71 | |
| d1lvla2 | 115 | Dihydrolipoamide dehydrogenase {Pseudomonas putida | 94.68 | |
| d1vj1a2 | 187 | Putative zinc-binding alcohol dehydrogenase {Mouse | 94.68 | |
| d3grsa2 | 125 | Glutathione reductase {Human (Homo sapiens) [TaxId | 94.67 | |
| d1q1ra2 | 133 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 94.56 | |
| d1vpda2 | 161 | Hydroxyisobutyrate dehydrogenase {Salmonella typhi | 94.48 | |
| d1xhca2 | 122 | NADH oxidase /nitrite reductase {Pyrococcus furios | 94.46 | |
| d1r0ka2 | 150 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z | 94.44 | |
| d1pjqa1 | 113 | Siroheme synthase CysG, domain 1 {Salmonella typhi | 94.41 | |
| d2pgda2 | 176 | 6-phosphogluconate dehydrogenase {Sheep (Ovis orie | 94.41 | |
| d1pgja2 | 178 | 6-phosphogluconate dehydrogenase {Trypanosoma bruc | 94.28 | |
| d1ryia1 | 276 | Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | 94.26 | |
| d1nyta1 | 170 | Shikimate 5-dehydrogenase AroE {Escherichia coli [ | 94.24 | |
| d1mv8a2 | 202 | GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos | 94.09 | |
| d1pl8a2 | 171 | Ketose reductase (sorbitol dehydrogenase) {Human ( | 94.07 | |
| d2bcgg1 | 297 | Guanine nucleotide dissociation inhibitor, GDI {Ba | 93.94 | |
| d1f8fa2 | 174 | Benzyl alcohol dehydrogenase {Acinetobacter calcoa | 93.94 | |
| d1h6va2 | 122 | Mammalian thioredoxin reductase {Rat (Rattus norve | 93.91 | |
| d1i36a2 | 152 | Conserved hypothetical protein MTH1747 {Archaeon M | 93.89 | |
| d1jqba2 | 174 | Bacterial secondary alcohol dehydrogenase {Clostri | 93.87 | |
| d1dxya1 | 199 | D-2-hydroxyisocaproate dehydrogenase {Lactobacillu | 93.76 | |
| d1q0qa2 | 151 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {E | 93.75 | |
| d1kyqa1 | 150 | Bifunctional dehydrogenase/ferrochelatase Met8p, N | 93.72 | |
| d1seza1 | 373 | Protoporphyrinogen oxidase {Tobacco (Nicotiana tab | 93.7 | |
| d2ahra2 | 152 | Pyrroline-5-carboxylate reductase ProC {Streptococ | 93.66 | |
| d1ps9a3 | 179 | 2,4-dienoyl-CoA reductase, middle domain {Escheric | 93.55 | |
| d1sc6a1 | 188 | Phosphoglycerate dehydrogenase {Escherichia coli [ | 93.52 | |
| d1ojta2 | 125 | Dihydrolipoamide dehydrogenase {Neisseria meningit | 93.51 | |
| d1nvmb1 | 157 | Acetaldehyde dehydrogenase (acylating) {Pseudomona | 93.44 | |
| d1mo9a2 | 121 | NADH-dependent 2-ketopropyl coenzyme M oxidoreduct | 93.4 | |
| d1dxla2 | 123 | Dihydrolipoamide dehydrogenase {Garden pea (Pisum | 93.3 | |
| d1npya1 | 167 | Shikimate 5-dehydrogenase-like protein HI0607 {Hae | 93.28 | |
| d1nvta1 | 177 | Shikimate 5-dehydrogenase AroE {Archaeon Methanoco | 92.89 | |
| d1gtea4 | 196 | Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su | 92.73 | |
| d2jhfa2 | 176 | Alcohol dehydrogenase {Horse (Equus caballus) [Tax | 92.62 | |
| d2iida1 | 370 | L-aminoacid oxidase {Malayan pit viper (Calloselas | 92.6 | |
| d1yqga2 | 152 | Pyrroline-5-carboxylate reductase ProC {Neisseria | 92.37 | |
| d2voua1 | 265 | Dihydroxypyridine hydroxylase DhpH {Arthrobacter n | 92.34 | |
| d1k0ia1 | 292 | p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a | 92.33 | |
| d1li4a1 | 163 | S-adenosylhomocystein hydrolase {Human (Homo sapie | 92.28 | |
| d2dt5a2 | 126 | Transcriptional repressor Rex, C-terminal domain { | 92.15 | |
| d1p77a1 | 171 | Shikimate 5-dehydrogenase AroE {Haemophilus influe | 92.14 | |
| d1f06a1 | 170 | Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb | 92.09 | |
| d1d5ta1 | 336 | Guanine nucleotide dissociation inhibitor, GDI {Co | 92.01 | |
| d1gu7a2 | 189 | 2,4-dienoyl-CoA reductase {Yeast (Candida tropical | 91.93 | |
| d1qp8a1 | 181 | Putative formate dehydrogenase {Archaeon Pyrobacul | 91.91 | |
| d1djqa3 | 233 | Trimethylamine dehydrogenase, middle domain {Methy | 91.56 | |
| d1rjwa2 | 168 | Alcohol dehydrogenase {Bacillus stearothermophilus | 91.36 | |
| d1i8ta1 | 298 | UDP-galactopyranose mutase, N-terminal domain {Esc | 91.23 | |
| d1txga2 | 180 | Glycerol-3- phosphate dehydrogenase {Archaeoglobus | 91.17 | |
| d1fcda1 | 186 | Flavocytochrome c sulfide dehydrogenase, FCSD, fla | 91.06 | |
| d1aoga2 | 117 | Trypanothione reductase {Trypanosoma cruzi [TaxId: | 91.02 | |
| d1mx3a1 | 193 | Transcription corepressor CtbP {Human (Homo sapien | 90.89 | |
| d1q1ra1 | 185 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 90.87 | |
| d1djqa2 | 156 | Trimethylamine dehydrogenase, C-terminal domain {M | 90.87 | |
| d2ivda1 | 347 | Protoporphyrinogen oxidase {Myxococcus xanthus [Ta | 90.73 | |
| d1gsoa2 | 105 | Glycinamide ribonucleotide synthetase (GAR-syn), N | 90.6 | |
| d1d7ya1 | 183 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 90.58 | |
| d1j4aa1 | 197 | D-lactate dehydrogenase {Lactobacillus helveticus | 90.52 | |
| d1p0fa2 | 174 | Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: | 90.15 | |
| d1h2ba2 | 172 | Alcohol dehydrogenase {Archaeon Aeropyrum pernix [ | 90.15 | |
| d2dw4a2 | 449 | Lysine-specific histone demethylase 1, LSD1 {Human | 90.13 | |
| d1dlja2 | 196 | UDP-glucose dehydrogenase (UDPGDH) {Streptococcus | 90.1 | |
| d3etja2 | 78 | N5-carboxyaminoimidazole ribonucleotide synthetase | 90.07 | |
| d1xhca1 | 167 | NADH oxidase /nitrite reductase {Pyrococcus furios | 89.79 | |
| d2gf3a1 | 281 | Sarcosine oxidase {Bacillus sp., strain b0618 [Tax | 88.92 | |
| d1pj5a2 | 305 | N,N-dimethylglycine oxidase {Arthrobacter globifor | 88.63 | |
| d1d1ta2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 88.39 | |
| d1c1da1 | 201 | Phenylalanine dehydrogenase {Rhodococcus sp., M4 [ | 88.38 | |
| d2gv8a1 | 335 | Flavin-dependent monoxygenase SPBP16F5.08c {Schizo | 88.36 | |
| d2fzwa2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 88.35 | |
| d1feca2 | 117 | Trypanothione reductase {Crithidia fasciculata [Ta | 88.24 | |
| d1e3ia2 | 174 | Alcohol dehydrogenase {Mouse (Mus musculus), class | 87.99 | |
| d1gdha1 | 191 | D-glycerate dehydrogenase {Hyphomicrobium methylov | 87.87 | |
| d1v9la1 | 242 | Glutamate dehydrogenase {Pyrobaculum islandicum [T | 87.16 | |
| d2i0za1 | 251 | Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396] | 86.92 | |
| d1b0aa1 | 166 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 86.89 | |
| d1ygya1 | 184 | Phosphoglycerate dehydrogenase {Mycobacterium tube | 86.67 | |
| d1kola2 | 195 | Formaldehyde dehydrogenase {Pseudomonas putida [Ta | 86.66 | |
| d2gv8a2 | 107 | Flavin-dependent monoxygenase SPBP16F5.08c {Schizo | 86.6 | |
| d1n4wa1 | 367 | Cholesterol oxidase of GMC family {Streptomyces sp | 86.43 | |
| d1pjca1 | 168 | L-alanine dehydrogenase {Phormidium lapideum [TaxI | 86.17 | |
| d2naca1 | 188 | Formate dehydrogenase {Pseudomonas sp., strain 101 | 86.12 | |
| d1v8ba1 | 163 | S-adenosylhomocystein hydrolase {Plasmodium falcip | 85.51 | |
| d1b5qa1 | 347 | Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} | 85.35 | |
| d1m6ia2 | 137 | Apoptosis-inducing factor (AIF) {Human (Homo sapie | 85.28 | |
| d2czca2 | 172 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 84.8 | |
| d2f5va1 | 379 | Pyranose 2-oxidase {White-rot fungus (Peniophora s | 84.61 | |
| d2v5za1 | 383 | Monoamine oxidase B {Human (Homo sapiens) [TaxId: | 84.44 | |
| d1lc0a1 | 172 | Biliverdin reductase {Rat (Rattus norvegicus) [Tax | 84.17 | |
| d1rp0a1 | 278 | Thiazole biosynthetic enzyme Thi4 {Thale cress(Ara | 84.17 | |
| d1edza1 | 171 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 84.01 | |
| d1hwxa1 | 293 | Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: | 83.87 | |
| d1fmta2 | 206 | Methionyl-tRNAfmet formyltransferase {Escherichia | 83.4 | |
| d2blna2 | 203 | Polymyxin resistance protein ArnA, N-terminal doma | 83.4 | |
| d3c96a1 | 288 | Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: | 83.34 | |
| d1a4ia1 | 170 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 83.14 | |
| d1jw9b_ | 247 | Molybdenum cofactor biosynthesis protein MoeB {Esc | 83.13 | |
| d1j6ua1 | 89 | UDP-N-acetylmuramate-alanine ligase MurC {Thermoto | 82.67 | |
| d1nhpa1 | 198 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 82.19 | |
| d1bgva1 | 255 | Glutamate dehydrogenase {Clostridium symbiosum [Ta | 81.95 | |
| d2gqfa1 | 253 | Hypothetical protein HI0933 {Haemophilus influenza | 81.63 | |
| d1f0ka_ | 351 | Peptidoglycan biosynthesis glycosyltransferase Mur | 81.5 | |
| d1byia_ | 224 | Dethiobiotin synthetase {Escherichia coli [TaxId: | 81.23 | |
| d1leha1 | 230 | Leucine dehydrogenase {Bacillus sphaericus [TaxId: | 81.01 | |
| d1w4xa1 | 298 | Phenylacetone monooxygenase {Thermobifida fusca [T | 80.62 | |
| d1gtma1 | 239 | Glutamate dehydrogenase {Archaeon Pyrococcus furio | 80.6 | |
| d3coxa1 | 370 | Cholesterol oxidase of GMC family {Brevibacterium | 80.31 |
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=99.96 E-value=1.9e-28 Score=205.19 Aligned_cols=168 Identities=20% Similarity=0.110 Sum_probs=130.1
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC------------CCCCCCceeEEEeeCCCHHHHHHHH
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG------------WFPTALVDRYITFDALDPTDTALKL 76 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~------------~~~~~~~~~~i~~Dl~d~~~~~~~~ 76 (211)
.|+|||||||||||++|+++|+ +.||+|++++|.+... ....++++ ++.+|++|.+.+.+.+
T Consensus 1 ~K~vLITGatGfiGs~lv~~Ll-----~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~~~~~~ 74 (357)
T d1db3a_ 1 SKVALITGVTGQDGSYLAEFLL-----EKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFH-LHYGDLSDTSNLTRIL 74 (357)
T ss_dssp CCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEECC---------------------CCEE-ECCCCSSCHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHH-----HCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeE-EEEeecCCHHHHHHHH
Confidence 3889999999999999999999 6899999999965321 11246789 9999999999999999
Q ss_pred HhcccccceEEeecccCC-----chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCC
Q 028258 77 SLISQEITNLFWVPLQVQ-----ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLM 151 (211)
Q Consensus 77 ~~~~~~~~~v~~~a~~~~-----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~ 151 (211)
++.+ +|+|+|+|+... .++...+++|+.+|.+|+++++.. +..+..+|+++||+.+||.+
T Consensus 75 ~~~~--~d~v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~--~~~~~~r~i~~SS~~vYG~~----------- 139 (357)
T d1db3a_ 75 REVQ--PDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFL--GLEKKTRFYQASTSELYGLV----------- 139 (357)
T ss_dssp HHHC--CSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHT--TCTTTCEEEEEEEGGGGTTC-----------
T ss_pred hccC--CCEEEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHh--CCCCCcEEEEEEchhhhCCC-----------
Confidence 9876 799999998743 256678899999999999999876 12345689999999999854
Q ss_pred CCCCCCcCCCCCCCCCCcchhHHHHHhh-------cCCCceEEEecCCceEecCCC
Q 028258 152 PYEVPFKEDSSRLPFPNFYYELEDVSAS-------YSPAITYSVHRSSVIIGASPR 200 (211)
Q Consensus 152 ~~~~~~~e~~~~~~~~~~~~~~e~~l~~-------~~~~~~~~i~Rp~~i~G~~~~ 200 (211)
...|++|++|.. |...|...|+..+ +..+++++++||+.+|||..+
T Consensus 140 -~~~~~~E~~~~~--P~~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~vyGp~~~ 192 (357)
T d1db3a_ 140 -QEIPQKETTPFY--PRSPYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRG 192 (357)
T ss_dssp -CSSSBCTTSCCC--CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSC
T ss_pred -CCCCcCCCCCCC--CCChHHHHHHHHHHHHHHHHHHhCCCEEEEEeccccCCCCC
Confidence 246789998753 4555555444433 345899999999999999643
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.93 E-value=7.6e-26 Score=187.59 Aligned_cols=166 Identities=17% Similarity=0.077 Sum_probs=126.8
Q ss_pred CeE-EEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------------CCCCCceeEEEeeCCCHHHHHHH
Q 028258 10 SVA-LIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------------FPTALVDRYITFDALDPTDTALK 75 (211)
Q Consensus 10 ~~i-lVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------------~~~~~~~~~i~~Dl~d~~~~~~~ 75 (211)
|+| ||||||||||++|+++|+ +.||+|++++|++.... ....+++ ++.+|++|++.+..+
T Consensus 1 kKI~LVTG~tGfIG~~l~~~Ll-----~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~~~~~ 74 (347)
T d1t2aa_ 1 RNVALITGITGQDGSYLAEFLL-----EKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMK-LHYGDLTDSTCLVKI 74 (347)
T ss_dssp CCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEECCCSSCCCTTTGGGC---------CEE-EEECCTTCHHHHHHH
T ss_pred CCEEEEecCCcHHHHHHHHHHH-----HCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcE-EEEeecCCchhhHHH
Confidence 455 999999999999999999 68999999999764311 1125678 999999999999999
Q ss_pred HHhcccccceEEeecccCCc-----hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCC
Q 028258 76 LSLISQEITNLFWVPLQVQE-----SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQL 150 (211)
Q Consensus 76 ~~~~~~~~~~v~~~a~~~~~-----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~ 150 (211)
+.+.+ +++++|+++.... .+...+++|+.++.+++++++++ +..+.++|+++||..+||.+
T Consensus 75 ~~~~~--~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~--~~~~~~~~i~~SS~~vyg~~---------- 140 (347)
T d1t2aa_ 75 INEVK--PTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTC--GLINSVKFYQASTSELYGKV---------- 140 (347)
T ss_dssp HHHHC--CSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHT--TCTTTCEEEEEEEGGGTCSC----------
T ss_pred Hhhcc--cceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHc--CCCCCcEEEEecchheecCC----------
Confidence 98876 6888888876542 34456789999999999999876 12235689999999999853
Q ss_pred CCCCCCCcCCCCCCCCCCcchhH-----HHHHhh--cCCCceEEEecCCceEecCC
Q 028258 151 MPYEVPFKEDSSRLPFPNFYYEL-----EDVSAS--YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 151 ~~~~~~~~e~~~~~~~~~~~~~~-----e~~l~~--~~~~~~~~i~Rp~~i~G~~~ 199 (211)
...|++|++|. .|...|.. |+++.. +..+++++++||+.+|||..
T Consensus 141 --~~~~~~E~~~~--~P~~~Yg~sK~~aE~~~~~~~~~~~~~~~ilr~~~vyGp~~ 192 (347)
T d1t2aa_ 141 --QEIPQKETTPF--YPRSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRR 192 (347)
T ss_dssp --SSSSBCTTSCC--CCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTS
T ss_pred --CCCCCCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEecceeCCCC
Confidence 24678999885 34555554 444333 34689999999999999854
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Probab=99.93 E-value=5.8e-25 Score=182.29 Aligned_cols=164 Identities=13% Similarity=0.090 Sum_probs=126.1
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC--------CCCCCceeEEEeeCCCHHHHHHHHHhcccc
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW--------FPTALVDRYITFDALDPTDTALKLSLISQE 82 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~--------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~ 82 (211)
+|||||||||||++|+++|+ +.||+|++++|-..... ....+++ ++++|++|.+.+.++++...
T Consensus 2 KiLItG~tGfIG~~l~~~L~-----~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~l~~~~~~~~-- 73 (338)
T d1udca_ 2 RVLVTGGSGYIGSHTCVQLL-----QNGHDVIILDNLCNSKRSVLPVIERLGGKHPT-FVEGDIRNEALMTEILHDHA-- 73 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHH-----HTTCEEEEEECCSSCCTTHHHHHHHHHTSCCE-EEECCTTCHHHHHHHHHHTT--
T ss_pred EEEEECCCCHHHHHHHHHHH-----HCcCEEEEEECCCCcchhhHHHHHhhcCCCCE-EEEeecCCHHHHHHHHhccC--
Confidence 49999999999999999999 68999999987433211 1246799 99999999999999998765
Q ss_pred cceEEeecccCCc-----hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCC
Q 028258 83 ITNLFWVPLQVQE-----SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPF 157 (211)
Q Consensus 83 ~~~v~~~a~~~~~-----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~ 157 (211)
+|+|||+|+.... ++...+++|+.++.++++++++. ++++|++.||..+|+... ..+.
T Consensus 74 ~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~-----~v~~~i~~Ss~~vy~~~~------------~~~~ 136 (338)
T d1udca_ 74 IDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAA-----NVKNFIFSSSATVYGDQP------------KIPY 136 (338)
T ss_dssp CSEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-----TCCEEEEEEEGGGGCSCC------------SSSB
T ss_pred CCEEEECCCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHh-----CCCEEEecCcceEEcccc------------cccc
Confidence 8999999987542 34567899999999999999987 689999999999986431 2334
Q ss_pred cCCCCCCCCCCcchh-----HHHHHhh---cCCCceEEEecCCceEecCCC
Q 028258 158 KEDSSRLPFPNFYYE-----LEDVSAS---YSPAITYSVHRSSVIIGASPR 200 (211)
Q Consensus 158 ~e~~~~~~~~~~~~~-----~e~~l~~---~~~~~~~~i~Rp~~i~G~~~~ 200 (211)
.|..+.. .|...|. .|+++.+ +..+++++++||+.+||+.+.
T Consensus 137 ~e~~~~~-~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~ 186 (338)
T d1udca_ 137 VESFPTG-TPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPS 186 (338)
T ss_dssp CTTSCCC-CCSSHHHHHHHHHHHHHHHHHHHSTTCEEEEEEECEEECCCTT
T ss_pred ccccccC-CCcchHHHHHhhhhHHHHHHHhhccCCeEEEEeeccEEeccCC
Confidence 4444432 3343343 3444443 457899999999999998763
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.93 E-value=4.5e-25 Score=183.48 Aligned_cols=169 Identities=13% Similarity=0.114 Sum_probs=130.3
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC--------CCCCCceeEEEeeCCCHHHHHHHHHhccc
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW--------FPTALVDRYITFDALDPTDTALKLSLISQ 81 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~--------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~ 81 (211)
|.|||||||||||++|+++|+ ++|++|++++|...... ....+++ ++.+|++|.+.+.+.++...
T Consensus 2 K~ILVTGatGfIG~~lv~~Ll-----~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~-~~~~Dl~d~~~l~~~~~~~~- 74 (347)
T d1z45a2 2 KIVLVTGGAGYIGSHTVVELI-----ENGYDCVVADNLSNSTYDSVARLEVLTKHHIP-FYEVDLCDRKGLEKVFKEYK- 74 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEECCSSCCTHHHHHHHHHHTSCCC-EEECCTTCHHHHHHHHHHSC-
T ss_pred CEEEEeCCCcHHHHHHHHHHH-----HCcCeEEEEECCCCcchhHHHhHHhhcccCCe-EEEeecCCHHHHHHHHhccC-
Confidence 689999999999999999999 68999999987433211 1246789 99999999999999998765
Q ss_pred ccceEEeecccCCc-----hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCC
Q 028258 82 EITNLFWVPLQVQE-----SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVP 156 (211)
Q Consensus 82 ~~~~v~~~a~~~~~-----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~ 156 (211)
+|+|||+|+.... .+.....+|+.++.++++++++. ++++|+++||..+|+.... . ....+
T Consensus 75 -~d~VihlAa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~-----~i~~~i~~SS~~vyg~~~~-----~---~~~~~ 140 (347)
T d1z45a2 75 -IDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQY-----NVSKFVFSSSATVYGDATR-----F---PNMIP 140 (347)
T ss_dssp -CCEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHH-----TCCEEEEEEEGGGGCCGGG-----S---TTCCS
T ss_pred -CCEEEEccccccccccccCcccccccchhhhHHHHHHHHhc-----ccceEEeecceeeecCccc-----C---CCCCc
Confidence 8999999987653 33456789999999999999987 7889999999999975321 0 12456
Q ss_pred CcCCCCCCCCCCcchhHHHHHhh---------cCCCceEEEecCCceEecCCCC
Q 028258 157 FKEDSSRLPFPNFYYELEDVSAS---------YSPAITYSVHRSSVIIGASPRS 201 (211)
Q Consensus 157 ~~e~~~~~~~~~~~~~~e~~l~~---------~~~~~~~~i~Rp~~i~G~~~~~ 201 (211)
++|+.+. .|...|...|...+ ...+++++++||+.+||+.+..
T Consensus 141 ~~e~~~~--~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~lR~~~v~g~~~~~ 192 (347)
T d1z45a2 141 IPEECPL--GPTNPYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSG 192 (347)
T ss_dssp BCTTSCC--CCCSHHHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTS
T ss_pred cccccCC--CCCChhHhHHHHHHHHHHHHHHhhccCCcEEEEeecceEeecCCC
Confidence 7777764 34444554444332 2468999999999999987644
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.92 E-value=2.3e-25 Score=184.71 Aligned_cols=165 Identities=16% Similarity=0.077 Sum_probs=127.2
Q ss_pred CCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC------------CCCCCceeEEEeeCCCHHHHH
Q 028258 6 QNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW------------FPTALVDRYITFDALDPTDTA 73 (211)
Q Consensus 6 ~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~------------~~~~~~~~~i~~Dl~d~~~~~ 73 (211)
++++|+|||||||||||++|+++|+ +.||+|++++|...... .....++ ++.+|+.|.....
T Consensus 13 ~~~~k~iLVTG~tGfIGs~lv~~L~-----~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~d~~d~~~~~ 86 (341)
T d1sb8a_ 13 PAQPKVWLITGVAGFIGSNLLETLL-----KLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFK-FIQGDIRNLDDCN 86 (341)
T ss_dssp HHSCCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEE-EEECCTTSHHHHH
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHH-----HCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCee-EEeeccccccccc
Confidence 3457899999999999999999999 69999999998443210 1135788 9999999988766
Q ss_pred HHHHhcccccceEEeecccCCc-----hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccC
Q 028258 74 LKLSLISQEITNLFWVPLQVQE-----SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAG 148 (211)
Q Consensus 74 ~~~~~~~~~~~~v~~~a~~~~~-----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g 148 (211)
..... +++++|+++.... ++...+++|+.++.+++++|... ++++|++.||+.+||.+
T Consensus 87 ~~~~~----~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~-----~~~~~i~~SS~~vyg~~-------- 149 (341)
T d1sb8a_ 87 NACAG----VDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDA-----KVQSFTYAASSSTYGDH-------- 149 (341)
T ss_dssp HHHTT----CSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-----TCSEEEEEEEGGGGTTC--------
T ss_pred ccccc----ccccccccccccccccccCccchhheeehhHHHHHHHHHhc-----CCceEEEcccceeeCCC--------
Confidence 65554 5778888876442 44567899999999999999987 67899999999999753
Q ss_pred CCCCCCCCCcCCCCCCCCCCcchhHHHHHhh-------cCCCceEEEecCCceEecCC
Q 028258 149 QLMPYEVPFKEDSSRLPFPNFYYELEDVSAS-------YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 149 ~~~~~~~~~~e~~~~~~~~~~~~~~e~~l~~-------~~~~~~~~i~Rp~~i~G~~~ 199 (211)
...|.+|++|. .|...|...|+..+ +..+++++++||+.+||+..
T Consensus 150 ----~~~~~~E~~~~--~p~~~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~v~G~~~ 201 (341)
T d1sb8a_ 150 ----PGLPKVEDTIG--KPLSPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQ 201 (341)
T ss_dssp ----CCSSBCTTCCC--CCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTC
T ss_pred ----CCCCccCCCCC--CCCCcchHHHHHHHHHHHHHHHHhCCCeEEEEeceeeccCc
Confidence 24678998885 34455554444333 35689999999999999976
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.92 E-value=8.1e-24 Score=175.53 Aligned_cols=167 Identities=13% Similarity=0.059 Sum_probs=125.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC--------------CCCCCceeEEEeeCCCHHHHH
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW--------------FPTALVDRYITFDALDPTDTA 73 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~--------------~~~~~~~~~i~~Dl~d~~~~~ 73 (211)
|.|+|||||||||||++|+++|+ +.||+|++++|...... ....+++ ++.+|++|.+.+.
T Consensus 1 M~kKILITG~tGfIGs~lv~~Ll-----~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~l~ 74 (346)
T d1ek6a_ 1 MAEKVLVTGGAGYIGSHTVLELL-----EAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVE-FEEMDILDQGALQ 74 (346)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHH-----HTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCE-EEECCTTCHHHHH
T ss_pred CCCeEEEECCCcHHHHHHHHHHH-----HCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcE-EEEeecccccccc
Confidence 56899999999999999999999 68999999986332210 1236788 9999999999999
Q ss_pred HHHHhcccccceEEeecccCCc-----hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccC
Q 028258 74 LKLSLISQEITNLFWVPLQVQE-----SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAG 148 (211)
Q Consensus 74 ~~~~~~~~~~~~v~~~a~~~~~-----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g 148 (211)
+.+.+.+ ++.++|+|+.... ++.+.+++|+.++.+++++++.. ++++|++.|+..+|+....
T Consensus 75 ~~~~~~~--~~~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~-----~v~~~i~~ss~~~~~~~~~------ 141 (346)
T d1ek6a_ 75 RLFKKYS--FMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAH-----GVKNLVFSSSATVYGNPQY------ 141 (346)
T ss_dssp HHHHHCC--EEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-----TCCEEEEEEEGGGGCSCSS------
T ss_pred ccccccc--cccccccccccCcHhhHhCHHHHHHhhhcccccccchhhhc-----Ccccccccccceeeecccc------
Confidence 9998876 7889999987653 35567899999999999999987 7889999999998875321
Q ss_pred CCCCCCCCCcCCCCCCCCCCcchhH-----HHHHhh---cCCCceEEEecCCceEecCCC
Q 028258 149 QLMPYEVPFKEDSSRLPFPNFYYEL-----EDVSAS---YSPAITYSVHRSSVIIGASPR 200 (211)
Q Consensus 149 ~~~~~~~~~~e~~~~~~~~~~~~~~-----e~~l~~---~~~~~~~~i~Rp~~i~G~~~~ 200 (211)
.+..+..+. ..+...|.. |+.+.+ ...+++++++||+.+||+...
T Consensus 142 ------~~~~~~~~~-~~~~~~Y~~~k~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~ 194 (346)
T d1ek6a_ 142 ------LPLDEAHPT-GGCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHAS 194 (346)
T ss_dssp ------SSBCTTSCC-CCCSSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTT
T ss_pred ------ccccccccc-cccCChHHHHHHHHHHHHHHHHHhccCCceEEEeecceeccCCC
Confidence 111222221 223333443 333333 357899999999999998754
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.92 E-value=2e-24 Score=180.32 Aligned_cols=172 Identities=12% Similarity=0.062 Sum_probs=124.7
Q ss_pred ccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-CCCCCceeEEEeeCCCHHHHHHHHHhcccc
Q 028258 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-FPTALVDRYITFDALDPTDTALKLSLISQE 82 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~ 82 (211)
|+++ ++|||||||||||++|+++|+ ++||+|++++|+..... ......+ +..+|+.+.+.+.+.+++
T Consensus 12 ~~~n--MKILVTGgsGfIGs~lv~~L~-----~~g~~V~~~d~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~---- 79 (363)
T d2c5aa1 12 PSEN--LKISITGAGGFIASHIARRLK-----HEGHYVIASDWKKNEHMTEDMFCDE-FHLVDLRVMENCLKVTEG---- 79 (363)
T ss_dssp TTSC--CEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESSCCSSSCGGGTCSE-EEECCTTSHHHHHHHHTT----
T ss_pred CCCC--CEEEEECCCCHHHHHHHHHHH-----HCcCEEEEEeCCCccchhhhcccCc-EEEeechhHHHHHHHhhc----
Confidence 4455 459999999999999999999 68999999988665432 1234557 888999999888887765
Q ss_pred cceEEeecccCCc------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCC
Q 028258 83 ITNLFWVPLQVQE------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVP 156 (211)
Q Consensus 83 ~~~v~~~a~~~~~------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~ 156 (211)
+|+|+|+|+.... .+......|+.++.++++++... ++++|++.||..+|+.... ........+
T Consensus 80 ~d~Vih~a~~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~-----~vk~~i~~SS~~~~~~~~~-----~~~~~~~~~ 149 (363)
T d2c5aa1 80 VDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARIN-----GIKRFFYASSACIYPEFKQ-----LETTNVSLK 149 (363)
T ss_dssp CSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHT-----TCSEEEEEEEGGGSCGGGS-----SSSSSCEEC
T ss_pred CCeEeecccccccccccccccccccccccchhhHHHHhHHhh-----Ccccccccccccccccccc-----ccccccccc
Confidence 7899999976542 34557788999999999999987 7899999999999975432 000001112
Q ss_pred CcCCCCCCCCCCcchhHHHHHhh-------cCCCceEEEecCCceEecCC
Q 028258 157 FKEDSSRLPFPNFYYELEDVSAS-------YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 157 ~~e~~~~~~~~~~~~~~e~~l~~-------~~~~~~~~i~Rp~~i~G~~~ 199 (211)
..|..|. .|...|...|+..+ +..+++++++||+.+||+..
T Consensus 150 ~~e~~~~--~p~~~Yg~sK~~~E~~~~~~~~~~gl~~~ilR~~~vyG~~~ 197 (363)
T d2c5aa1 150 ESDAWPA--EPQDAFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFG 197 (363)
T ss_dssp GGGGSSB--CCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTS
T ss_pred cccCCcC--CCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEeeeEeccCC
Confidence 3344442 34444554444333 34589999999999999865
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Probab=99.91 E-value=1.9e-24 Score=176.91 Aligned_cols=153 Identities=15% Similarity=0.159 Sum_probs=117.0
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccceEEe
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITNLFW 88 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~~ 88 (211)
+|+|||||||||||++|+++|+ ++|+.|++++++. .+|+.|.+.+.+.++... +|.|+|
T Consensus 2 kkkIlITG~tGfiG~~l~~~L~-----~~g~~vi~~~~~~--------------~~~~~~~~~~~~~~~~~~--~d~v~~ 60 (315)
T d1e6ua_ 2 KQRVFIAGHRGMVGSAIRRQLE-----QRGDVELVLRTRD--------------ELNLLDSRAVHDFFASER--IDQVYL 60 (315)
T ss_dssp CEEEEEETTTSHHHHHHHHHHT-----TCTTEEEECCCTT--------------TCCTTCHHHHHHHHHHHC--CSEEEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHH-----HCcCEEEEecCch--------------hccccCHHHHHHHHhhcC--CCEEEE
Confidence 6789999999999999999999 6899988765432 257889988888887754 799999
Q ss_pred ecccCCc------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCCC
Q 028258 89 VPLQVQE------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSS 162 (211)
Q Consensus 89 ~a~~~~~------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~~ 162 (211)
+++.... ...+.+++|+.++.++++++.+. ++++|+++||..+|+.+. ..|++|+.+
T Consensus 61 ~a~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~-----~v~~~i~~SS~~vyg~~~------------~~~~~E~~~ 123 (315)
T d1e6ua_ 61 AAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQN-----DVNKLLFLGSSCIYPKLA------------KQPMAESEL 123 (315)
T ss_dssp CCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-----TCCEEEEECCGGGSCTTC------------CSSBCGGGT
T ss_pred cchhccccccchhhHHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEECCceEcCCCC------------CCCccCCcc
Confidence 9866542 34456788999999999999987 789999999999998532 345677665
Q ss_pred CCCC---CCcchhHHHH-----Hhh--cCCCceEEEecCCceEecCC
Q 028258 163 RLPF---PNFYYELEDV-----SAS--YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 163 ~~~~---~~~~~~~e~~-----l~~--~~~~~~~~i~Rp~~i~G~~~ 199 (211)
.... ++..|...|. +.. +..+++++++||+.||||..
T Consensus 124 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ilR~~~vyGp~~ 170 (315)
T d1e6ua_ 124 LQGTLEPTNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHD 170 (315)
T ss_dssp TSSCCCGGGHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEESTTC
T ss_pred ccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEeeccEECCCC
Confidence 4322 2334554443 333 34589999999999999875
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.91 E-value=6.4e-24 Score=174.05 Aligned_cols=164 Identities=13% Similarity=0.049 Sum_probs=125.9
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHhcccc
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSLISQE 82 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~ 82 (211)
|+|||||||||||++|+++|+ ++||+|++++|...... ...++++ ++.+|++|.+.+.+.+....
T Consensus 1 k~vLItG~tGfiG~~l~~~Ll-----~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~-~~~~Dl~d~~~~~~~~~~~~-- 72 (321)
T d1rpna_ 1 RSALVTGITGQDGAYLAKLLL-----EKGYRVHGLVARRSSDTRWRLRELGIEGDIQ-YEDGDMADACSVQRAVIKAQ-- 72 (321)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEECCCSSCCCHHHHHTTCGGGEE-EEECCTTCHHHHHHHHHHHC--
T ss_pred CEEEEECCCCHHHHHHHHHHH-----HCcCEEEEEECCCCcccHHHHHHhcccCCcE-EEEccccChHHhhhhhcccc--
Confidence 689999999999999999999 68999999999765421 1246788 99999999999999888865
Q ss_pred cceEEeecccCCc-----hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCC
Q 028258 83 ITNLFWVPLQVQE-----SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPF 157 (211)
Q Consensus 83 ~~~v~~~a~~~~~-----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~ 157 (211)
++.++|+++.... +....++.|+.++.++++++++. . ..++|++.|+..+|+.. ...+.
T Consensus 73 ~~~~~~~a~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~---~-~~~~~i~~Ss~~~~~~~------------~~~~~ 136 (321)
T d1rpna_ 73 PQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQF---S-PETRFYQASTSEMFGLI------------QAERQ 136 (321)
T ss_dssp CSEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHH---C-TTSEEEEEEEGGGGCSC------------SSSSB
T ss_pred ccccccccccccccccccchHHHHhhhhhchHHHHHHHHHh---C-CCcccccccchhhcCcc------------cCCCC
Confidence 5677777766442 34567899999999999999987 2 35678888888877642 13456
Q ss_pred cCCCCCCCCCCcchhHHHHHhh-------cCCCceEEEecCCceEecCC
Q 028258 158 KEDSSRLPFPNFYYELEDVSAS-------YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 158 ~e~~~~~~~~~~~~~~e~~l~~-------~~~~~~~~i~Rp~~i~G~~~ 199 (211)
+|++|. .|...|...|...+ ...+++++++||+.+|||..
T Consensus 137 ~E~~~~--~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lr~~~vyGp~~ 183 (321)
T d1rpna_ 137 DENTPF--YPRSPYGVAKLYGHWITVNYRESFGLHASSGILFNHESPLR 183 (321)
T ss_dssp CTTSCC--CCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTS
T ss_pred CCCCCc--cccChhHHHHHHHHHHHHHHHhhcCCcEEEEEEecccCCCc
Confidence 787774 34555654443333 34689999999999999864
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.91 E-value=2.6e-25 Score=182.74 Aligned_cols=159 Identities=17% Similarity=0.140 Sum_probs=111.3
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC------CCCCCceeEEEeeCCCHHHHHHHHHhcccc
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW------FPTALVDRYITFDALDPTDTALKLSLISQE 82 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~ 82 (211)
+|+|||||||||||++|+++|+ +.||+|++++|...... .....++ ....|+.+. ++. .
T Consensus 1 kKKIlVtG~sGfiG~~lv~~L~-----~~g~~V~~~d~~~~~~~~~~~~~~~~~~~d-~~~~~~~~~-----~~~----~ 65 (312)
T d2b69a1 1 RKRILITGGAGFVGSHLTDKLM-----MDGHEVTVVDNFFTGRKRNVEHWIGHENFE-LINHDVVEP-----LYI----E 65 (312)
T ss_dssp CCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEECCSSCCGGGTGGGTTCTTEE-EEECCTTSC-----CCC----C
T ss_pred CCEEEEECCCcHHHHHHHHHHH-----HCcCEEEEEeCCCcCCHHHHHHhcCCCceE-EEehHHHHH-----HHc----C
Confidence 5899999999999999999999 68999999987433211 1223444 445555432 222 2
Q ss_pred cceEEeecccCC-----chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCC
Q 028258 83 ITNLFWVPLQVQ-----ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPF 157 (211)
Q Consensus 83 ~~~v~~~a~~~~-----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~ 157 (211)
+|+|||+|+... .++.+.+++|+.++.+++++++.. ++ +++++||+.+|+.+. ..|.
T Consensus 66 ~d~VihlAa~~~~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~-----~~-k~I~~SS~~vy~~~~------------~~~~ 127 (312)
T d2b69a1 66 VDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRV-----GA-RLLLASTSEVYGDPE------------VHPQ 127 (312)
T ss_dssp CSEEEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHH-----TC-EEEEEEEGGGGBSCS------------SSSB
T ss_pred CCEEEECcccCCchhHHhCHHHHHHHHHHHHHHHHHHHHHc-----CC-cEEEEEChheecCCC------------CCCC
Confidence 899999998754 245667899999999999999987 44 688999999998642 2334
Q ss_pred cCCCCCC---CCCCcchhHHHHHhh-------cCCCceEEEecCCceEecCCC
Q 028258 158 KEDSSRL---PFPNFYYELEDVSAS-------YSPAITYSVHRSSVIIGASPR 200 (211)
Q Consensus 158 ~e~~~~~---~~~~~~~~~e~~l~~-------~~~~~~~~i~Rp~~i~G~~~~ 200 (211)
+|+.... ..|...|...|...+ +..+++++++||+.||||+..
T Consensus 128 ~e~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~ 180 (312)
T d2b69a1 128 SEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMH 180 (312)
T ss_dssp CTTCCCBCCSSSTTHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCC
T ss_pred CccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHhCCcEEEEEeeeEECCCCC
Confidence 4433211 134555654443333 356899999999999998753
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.91 E-value=8.5e-24 Score=174.42 Aligned_cols=169 Identities=18% Similarity=0.120 Sum_probs=121.9
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------------CCCCCceeEEEeeCCCHHHHHHH
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------------FPTALVDRYITFDALDPTDTALK 75 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------------~~~~~~~~~i~~Dl~d~~~~~~~ 75 (211)
+|++||||||||||+||+++|+ ++||+|++++|..+... .....++ ++.+|+++.+.+.+.
T Consensus 1 ~k~~LVTGatGfiG~~lv~~Ll-----~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Di~~~~~~~~~ 74 (339)
T d1n7ha_ 1 RKIALITGITGQDGSYLTEFLL-----GKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMK-LHYADLTDASSLRRW 74 (339)
T ss_dssp CCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEECCCSSCCCTTTTTTC--------CCEE-EEECCTTCHHHHHHH
T ss_pred CCEEEEeCCccHHHHHHHHHHH-----HCcCEEEEEECCCcccchhhhhhhhhhhhhccccceE-EEEccccCHHHHHHH
Confidence 5899999999999999999999 68999999999643210 1135577 889999999999999
Q ss_pred HHhcccccceEEeecccCCc-----hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCC
Q 028258 76 LSLISQEITNLFWVPLQVQE-----SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQL 150 (211)
Q Consensus 76 ~~~~~~~~~~v~~~a~~~~~-----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~ 150 (211)
++... +|+|+|+|+.... ++...+..|..++.+++++++..........++++.|++.+|+.
T Consensus 75 ~~~~~--~D~Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~----------- 141 (339)
T d1n7ha_ 75 IDVIK--PDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGS----------- 141 (339)
T ss_dssp HHHHC--CSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTT-----------
T ss_pred Hhhhc--cchhhhccccccccccccCccccccccccccchhhhhhhhcccccccceeeeecccceeccc-----------
Confidence 88765 7999999987543 44567788999999999988753100112335566666555432
Q ss_pred CCCCCCCcCCCCCCCCCCcchhHHHHHhh-------cCCCceEEEecCCceEecCCC
Q 028258 151 MPYEVPFKEDSSRLPFPNFYYELEDVSAS-------YSPAITYSVHRSSVIIGASPR 200 (211)
Q Consensus 151 ~~~~~~~~e~~~~~~~~~~~~~~e~~l~~-------~~~~~~~~i~Rp~~i~G~~~~ 200 (211)
...+.+|++|. .|...|...|+..+ +..+++++++||+.+|||..+
T Consensus 142 --~~~~~~E~~~~--~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~ 194 (339)
T d1n7ha_ 142 --TPPPQSETTPF--HPRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRG 194 (339)
T ss_dssp --SCSSBCTTSCC--CCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSC
T ss_pred --CCCCCCCCCCC--CCcchhhHHHHHHHHHHHHHHHHhCCCEEEEEEccccCCCCC
Confidence 13567888874 34555554443333 446899999999999998643
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.91 E-value=7.5e-24 Score=177.38 Aligned_cols=176 Identities=13% Similarity=0.073 Sum_probs=122.9
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcE-EEEEeCCCCC-------CCCCCCCceeEEEeeCCCHHHHHHHHHhcccc
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWK-VYGAARRPPP-------GWFPTALVDRYITFDALDPTDTALKLSLISQE 82 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~-V~~~~R~~~~-------~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~ 82 (211)
+|||||||||||++|+++|+ +.|++ |+++++.... .....++++ ++.+|++|++.+.+.+++.+
T Consensus 2 kILItG~tGfIGs~l~~~L~-----~~g~~vv~~~d~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~l~~~~~~~~-- 73 (361)
T d1kewa_ 2 KILITGGAGFIGSAVVRHII-----KNTQDTVVNIDKLTYAGNLESLSDISESNRYN-FEHADICDSAEITRIFEQYQ-- 73 (361)
T ss_dssp EEEEESTTSHHHHHHHHHHH-----HHCSCEEEEEECCCTTCCGGGGTTTTTCTTEE-EEECCTTCHHHHHHHHHHHC--
T ss_pred EEEEECCCcHHHHHHHHHHH-----HCCCCEEEEEeCCCccccHHHHHhhhhcCCcE-EEEccCCCHHHHHHHHHhCC--
Confidence 59999999999999999999 57887 5556553322 112346899 99999999999999998875
Q ss_pred cceEEeecccCCc-----hhHHHHhhcHHHHHHHHHHHHhcCCC----CCCceEEEEeecCeeeecccCCccccCCCCCC
Q 028258 83 ITNLFWVPLQVQE-----SEEVNIFKNSTMLKNVLSVLVSSNSG----RSRLRHVALLTGTKHYMGPIFDPSLAGQLMPY 153 (211)
Q Consensus 83 ~~~v~~~a~~~~~-----~~~~~~~~n~~~~~~l~~~~~~~~~~----~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~ 153 (211)
+|+|||||+.... ++...+++|+.++.++++++.+.... ..++++|+++||..+||..... .-.....
T Consensus 74 ~d~VihlAa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~---~~~~~~~ 150 (361)
T d1kewa_ 74 PDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHP---DEVENSV 150 (361)
T ss_dssp CSEEEECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCG---GGSCTTS
T ss_pred CCEEEECccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccC---Ccccccc
Confidence 8999999987552 45567899999999999999764000 0124589999999999854220 0000001
Q ss_pred CCC-CcCCCCCCCCCCcchhHHHHHhh-------cCCCceEEEecCCceEecCC
Q 028258 154 EVP-FKEDSSRLPFPNFYYELEDVSAS-------YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 154 ~~~-~~e~~~~~~~~~~~~~~e~~l~~-------~~~~~~~~i~Rp~~i~G~~~ 199 (211)
..| ..|+.+. .|...|...|...+ ...+++++++||+.||||..
T Consensus 151 ~~~~~~e~~~~--~p~s~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~~~vyGp~~ 202 (361)
T d1kewa_ 151 TLPLFTETTAY--APSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYH 202 (361)
T ss_dssp CCCCBCTTSCC--CCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTC
T ss_pred CCCCcccCCCC--CCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEecCceECcCC
Confidence 122 2344442 34454554444333 34689999999999999875
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.90 E-value=1.9e-23 Score=161.78 Aligned_cols=152 Identities=13% Similarity=0.057 Sum_probs=113.9
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-CCCCCceeEEEeeCCCHHHHHHHHHhcccccceEE
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-FPTALVDRYITFDALDPTDTALKLSLISQEITNLF 87 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~ 87 (211)
+|+|+||||||+||++++++|+ ++||+|++++|++.+.. ....+++ ++.+|++|.+++.+++++ +|.||
T Consensus 3 ~kkIlV~GatG~iG~~v~~~Ll-----~~g~~V~~~~R~~~~~~~~~~~~~~-~~~gD~~d~~~l~~al~~----~d~vi 72 (205)
T d1hdoa_ 3 VKKIAIFGATGQTGLTTLAQAV-----QAGYEVTVLVRDSSRLPSEGPRPAH-VVVGDVLQAADVDKTVAG----QDAVI 72 (205)
T ss_dssp CCEEEEESTTSHHHHHHHHHHH-----HTTCEEEEEESCGGGSCSSSCCCSE-EEESCTTSHHHHHHHHTT----CSEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHH-----HCcCEEEEEEcChhhcccccccccc-cccccccchhhHHHHhcC----CCEEE
Confidence 4779999999999999999999 68999999999887543 2357789 999999999999999987 57899
Q ss_pred eecccCCchhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCCCCCCCC
Q 028258 88 WVPLQVQESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFP 167 (211)
Q Consensus 88 ~~a~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~~~~~~~ 167 (211)
|+++.... .....++..++++++++++++ ++++|+++|+...|..+. ..+ +..
T Consensus 73 ~~~g~~~~--~~~~~~~~~~~~~l~~aa~~~-----~v~r~i~~ss~~~~~~~~------------------~~~--~~~ 125 (205)
T d1hdoa_ 73 VLLGTRND--LSPTTVMSEGARNIVAAMKAH-----GVDKVVACTSAFLLWDPT------------------KVP--PRL 125 (205)
T ss_dssp ECCCCTTC--CSCCCHHHHHHHHHHHHHHHH-----TCCEEEEECCGGGTSCTT------------------CSC--GGG
T ss_pred EEeccCCc--hhhhhhhHHHHHHHHHHHHhc-----CCCeEEEEeeeeccCCCc------------------ccc--ccc
Confidence 98876432 122345678889999999987 789999998866554210 011 000
Q ss_pred Ccch----hHHHHHhhcCCCceEEEecCCceEecCC
Q 028258 168 NFYY----ELEDVSASYSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 168 ~~~~----~~e~~l~~~~~~~~~~i~Rp~~i~G~~~ 199 (211)
..++ ..|+.++ ..+++|+++||+.+++...
T Consensus 126 ~~~~~~~~~~e~~l~--~~~~~~tiirp~~~~~~~~ 159 (205)
T d1hdoa_ 126 QAVTDDHIRMHKVLR--ESGLKYVAVMPPHIGDQPL 159 (205)
T ss_dssp HHHHHHHHHHHHHHH--HTCSEEEEECCSEEECCCC
T ss_pred cccchHHHHHHHHHH--hcCCceEEEecceecCCCC
Confidence 1122 2345554 4899999999999987544
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.89 E-value=2.5e-23 Score=172.73 Aligned_cols=173 Identities=11% Similarity=0.022 Sum_probs=118.1
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC---C-----CCCCCCceeEEEeeCCCHHHHHHHHHhcc
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP---G-----WFPTALVDRYITFDALDPTDTALKLSLIS 80 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~---~-----~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~ 80 (211)
+|+|||||||||||++|+++|+ +.|++|.++.++... . .....+++ ++.+|+.|.+.+.+++..
T Consensus 2 ~mkILVTGgtGfIGs~lv~~L~-----~~g~~v~v~~~d~~~~~~~~~~~~~~~~~~i~-~~~~Di~d~~~~~~~~~~-- 73 (346)
T d1oc2a_ 2 FKNIIVTGGAGFIGSNFVHYVY-----NNHPDVHVTVLDKLTYAGNKANLEAILGDRVE-LVVGDIADAELVDKLAAK-- 73 (346)
T ss_dssp CSEEEEETTTSHHHHHHHHHHH-----HHCTTCEEEEEECCCTTCCGGGTGGGCSSSEE-EEECCTTCHHHHHHHHTT--
T ss_pred cCEEEEeCCCcHHHHHHHHHHH-----HCCCCeEEEEEeCCCccccHHHHHHhhcCCeE-EEEccCCCHHHHHHHHhh--
Confidence 3679999999999999999999 577775555443211 1 11346889 999999999999888876
Q ss_pred cccceEEeecccCCc-----hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCC
Q 028258 81 QEITNLFWVPLQVQE-----SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEV 155 (211)
Q Consensus 81 ~~~~~v~~~a~~~~~-----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~ 155 (211)
.+.|+|+|+.... ++.+.+++|+.++.++++++... + .++++.||..+|+.........-.......
T Consensus 74 --~~~v~~~a~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~-----~-~k~i~~ss~~vyg~~~~~~~~~~~~~~~~~ 145 (346)
T d1oc2a_ 74 --ADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKY-----D-IRFHHVSTDEVYGDLPLREDLPGHGEGPGE 145 (346)
T ss_dssp --CSEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHH-----T-CEEEEEEEGGGGCCBCCGGGSTTTTCSTTS
T ss_pred --hhhhhhhhhcccccchhhCcccceeeehHhHHhhhhhhccc-----c-ccccccccceEecccCccccccccccCccc
Confidence 4668889877543 44567899999999999999887 3 356777888899742110000000001123
Q ss_pred CCcCCCCCCCCCCcchhHHHHH-----hh--cCCCceEEEecCCceEecCC
Q 028258 156 PFKEDSSRLPFPNFYYELEDVS-----AS--YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 156 ~~~e~~~~~~~~~~~~~~e~~l-----~~--~~~~~~~~i~Rp~~i~G~~~ 199 (211)
..+|+++. .|...|...|+. .. +..+++++++||+.+|||..
T Consensus 146 ~~~e~~~~--~p~s~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~vyGp~~ 194 (346)
T d1oc2a_ 146 KFTAETNY--NPSSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQ 194 (346)
T ss_dssp SBCTTSCC--CCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTC
T ss_pred ccccCCCC--CCCCHHHHHHHHHHHHHHHHHHHcCCCEEEEeecceeCCCC
Confidence 34555543 345555544433 33 35689999999999999864
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Probab=99.89 E-value=8.2e-24 Score=174.09 Aligned_cols=160 Identities=16% Similarity=0.125 Sum_probs=119.9
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcE------EEEEeCCCCCC-------CCCCCCceeEEEeeCCCHHHHHHHHH
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWK------VYGAARRPPPG-------WFPTALVDRYITFDALDPTDTALKLS 77 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~------V~~~~R~~~~~-------~~~~~~~~~~i~~Dl~d~~~~~~~~~ 77 (211)
+|||||||||||++|+++|+ +.||+ |+.+++..... .....+++ ++.+|+.+.........
T Consensus 2 kIlItG~tGfIG~~l~~~L~-----~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~ 75 (322)
T d1r6da_ 2 RLLVTGGAGFIGSHFVRQLL-----AGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLR-FVHGDIRDAGLLARELR 75 (322)
T ss_dssp EEEEETTTSHHHHHHHHHHH-----HTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEE-EEECCTTCHHHHHHHTT
T ss_pred EEEEECCCCHHHHHHHHHHH-----HCCCCccCCceEEEEeCCCccccHhHhhhhhcCCCeE-EEEeccccchhhhcccc
Confidence 59999999999999999999 57765 44454422110 11346788 99999999887665544
Q ss_pred hcccccceEEeecccCCc-----hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCC
Q 028258 78 LISQEITNLFWVPLQVQE-----SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMP 152 (211)
Q Consensus 78 ~~~~~~~~v~~~a~~~~~-----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~ 152 (211)
. +|.|+|+|+.... ...+.+++|+.++.++++++.+. ++++|+++||..+|+.+.
T Consensus 76 ~----~d~vi~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~-----~~~~~I~~Ss~~~yg~~~----------- 135 (322)
T d1r6da_ 76 G----VDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDA-----GVGRVVHVSTNQVYGSID----------- 135 (322)
T ss_dssp T----CCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHT-----TCCEEEEEEEGGGGCCCS-----------
T ss_pred c----cceEEeecccccccccccchHHHhhhhHHHHHHHHHHHHHc-----CCceEEEeecceeecCCC-----------
Confidence 3 7889999977543 34456789999999999999987 678999999999998542
Q ss_pred CCCCCcCCCCCCCCCCcchhH-----HHHHhh--cCCCceEEEecCCceEecCC
Q 028258 153 YEVPFKEDSSRLPFPNFYYEL-----EDVSAS--YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 153 ~~~~~~e~~~~~~~~~~~~~~-----e~~l~~--~~~~~~~~i~Rp~~i~G~~~ 199 (211)
+.|++|++|.. |...|.. |.++.. +..+++++++||+.+|||..
T Consensus 136 -~~~~~E~~~~~--p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~ 186 (322)
T d1r6da_ 136 -SGSWTESSPLE--PNSPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQ 186 (322)
T ss_dssp -SSCBCTTSCCC--CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTC
T ss_pred -CCCCCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEeeeEECcCC
Confidence 46788988853 4444544 333333 45689999999999999875
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.89 E-value=9.6e-23 Score=171.82 Aligned_cols=178 Identities=16% Similarity=0.066 Sum_probs=121.5
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCC----------CCC---CC-----------CCCCCceeEEEe
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR----------PPP---GW-----------FPTALVDRYITF 64 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~----------~~~---~~-----------~~~~~~~~~i~~ 64 (211)
+|+|||||||||||++|+++|+ +.||+|++++.- ... .. ....+++ ++.+
T Consensus 1 g~kILVTGatGfiG~~lv~~Ll-----~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~ 74 (393)
T d1i24a_ 1 GSRVMVIGGDGYCGWATALHLS-----KKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIE-LYVG 74 (393)
T ss_dssp -CEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCE-EEES
T ss_pred CCEEEEECCCcHHHHHHHHHHH-----HCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcE-EEEc
Confidence 4789999999999999999999 699999999620 010 00 0135789 9999
Q ss_pred eCCCHHHHHHHHHhcccccceEEeecccCCc--------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCee
Q 028258 65 DALDPTDTALKLSLISQEITNLFWVPLQVQE--------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKH 136 (211)
Q Consensus 65 Dl~d~~~~~~~~~~~~~~~~~v~~~a~~~~~--------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~ 136 (211)
|++|.+.+.+++++.+ +|+|+|+|+.... .+...+.+|+.++.++++++++. + ..+++++.|+..+
T Consensus 75 Dl~d~~~l~~~~~~~~--~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~---~-~~~~~i~~ss~~~ 148 (393)
T d1i24a_ 75 DICDFEFLAESFKSFE--PDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEF---G-EECHLVKLGTMGE 148 (393)
T ss_dssp CTTSHHHHHHHHHHHC--CSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHH---C-TTCEEEEECCGGG
T ss_pred cCCCHHHHHHHHHhhc--chheeccccccccccccccccccccccccccccccHHHHHHHHh---c-cccceeecccccc
Confidence 9999999999999876 8999999986432 12346789999999999999987 2 3466778888777
Q ss_pred eecccCCccccCCCCCCCCCCcCCCCCCCCCCcchhHHHHHhh-------cCCCceEEEecCCceEecCC
Q 028258 137 YMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVSAS-------YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 137 y~~~~~~~~~~g~~~~~~~~~~e~~~~~~~~~~~~~~e~~l~~-------~~~~~~~~i~Rp~~i~G~~~ 199 (211)
|+.+.... ..+.....+....++.+....|...|...|++.+ +..+++++++||+.+||+..
T Consensus 149 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~~v~G~~~ 217 (393)
T d1i24a_ 149 YGTPNIDI-EEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKT 217 (393)
T ss_dssp GCCCSSCB-CSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCC
T ss_pred cccccccc-ccccccccccccccccccccccccHHHHHhhhhcccccccccccceeeeecccccccCCCc
Confidence 76431100 0000000000111111222245556666555544 35789999999999999875
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Probab=99.89 E-value=1.6e-22 Score=170.00 Aligned_cols=173 Identities=12% Similarity=0.045 Sum_probs=124.7
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC---C---------------------CCCCCCCceeEEEee
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP---P---------------------GWFPTALVDRYITFD 65 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~---~---------------------~~~~~~~~~~~i~~D 65 (211)
++|||||||||||++|+++|++ +.||+|+++++-.. . .......++ ++.+|
T Consensus 3 MKVLITG~tGfIGs~lv~~LL~----~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~D 77 (383)
T d1gy8a_ 3 MRVLVCGGAGYIGSHFVRALLR----DTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAA-LEVGD 77 (383)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH----HCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCE-EEESC
T ss_pred CEEEEeCCCcHHHHHHHHHHHH----hCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceE-EEECc
Confidence 3699999999999999999984 57999999975110 0 001234577 88999
Q ss_pred CCCHHHHHHHHHhcccccceEEeecccCCc-----hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecc
Q 028258 66 ALDPTDTALKLSLISQEITNLFWVPLQVQE-----SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGP 140 (211)
Q Consensus 66 l~d~~~~~~~~~~~~~~~~~v~~~a~~~~~-----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~ 140 (211)
++|.+.+.++++.... +|+|+|+|+.... .....+++|+.++.+++++++.. +++++++.++...|+..
T Consensus 78 i~d~~~l~~~~~~~~~-~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~-----~~~~~~~~~s~~~~~~~ 151 (383)
T d1gy8a_ 78 VRNEDFLNGVFTRHGP-IDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLH-----KCDKIIFSSSAAIFGNP 151 (383)
T ss_dssp TTCHHHHHHHHHHSCC-CCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-----TCCEEEEEEEGGGTBSC
T ss_pred ccCHHHhhhhhhccce-eehhhcccccccccccccccccccccccccccccchhhhcc-----CCccccccccccccccc
Confidence 9999999999988764 7999999987653 23456789999999999999987 67888888887777643
Q ss_pred cCCccccCCCCCCCCCCcCCCCCCCCCCcchhHHHH-----Hhh--cCCCceEEEecCCceEecCCC
Q 028258 141 IFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDV-----SAS--YSPAITYSVHRSSVIIGASPR 200 (211)
Q Consensus 141 ~~~~~~~g~~~~~~~~~~e~~~~~~~~~~~~~~e~~-----l~~--~~~~~~~~i~Rp~~i~G~~~~ 200 (211)
.. ......+.|..|+.+. .|...|...|+ +.+ ...+++++++||+.+||+...
T Consensus 152 ~~-----~~~~~~~~~~~e~~~~--~p~~~Y~~sK~~~e~~~~~~~~~~gl~~~~lR~~~vyG~~~~ 211 (383)
T d1gy8a_ 152 TM-----GSVSTNAEPIDINAKK--SPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHED 211 (383)
T ss_dssp CC----------CCCCBCTTSCC--BCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTT
T ss_pred cc-----ccccccccccccccCC--CCCCHHHhhHhHHHHHHHHHHHHhCCCEEEEecceeeccCcc
Confidence 21 1101124456666653 34454554433 333 346899999999999999763
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=99.88 E-value=4.2e-22 Score=165.16 Aligned_cols=166 Identities=16% Similarity=0.060 Sum_probs=121.5
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC------CCCCCceeEEEeeCCCHHHHHHHHHhcccc
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW------FPTALVDRYITFDALDPTDTALKLSLISQE 82 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~ 82 (211)
+|+|||||||||||++|+++|+ +.||+|++++|+..+.. ...++++ ++.+|++|++.+.++++...
T Consensus 8 ~KkILVTG~tGfIGs~lv~~Ll-----~~g~~V~~~~r~~~~~~~~~~~~~~~~~i~-~~~~Dl~d~~~l~~~~~~~~-- 79 (356)
T d1rkxa_ 8 GKRVFVTGHTGFKGGWLSLWLQ-----TMGATVKGYSLTAPTVPSLFETARVADGMQ-SEIGDIRDQNKLLESIREFQ-- 79 (356)
T ss_dssp TCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESSCSSSSCHHHHTTTTTTSE-EEECCTTCHHHHHHHHHHHC--
T ss_pred CCEEEEECCCCHHHHHHHHHHH-----HCCCEEEEEECCCCccHHHHhhhhcccCCe-EEEeeccChHhhhhhhhhch--
Confidence 5899999999999999999999 68999999999776432 1246799 99999999999999998876
Q ss_pred cceEEeecccCCc-----hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCC
Q 028258 83 ITNLFWVPLQVQE-----SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPF 157 (211)
Q Consensus 83 ~~~v~~~a~~~~~-----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~ 157 (211)
+++|+|+++.... .+...+.+|+.++.++++++... . ....+++.|+...|..+. ...+.
T Consensus 80 ~~~v~~~aa~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~---~-~~~~~~~~s~~~~~~~~~-----------~~~~~ 144 (356)
T d1rkxa_ 80 PEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHV---G-GVKAVVNITSDKCYDNKE-----------WIWGY 144 (356)
T ss_dssp CSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHH---C-CCCEEEEECCGGGBCCCC-----------SSSCB
T ss_pred hhhhhhhhccccccccccCCccccccccccchhhhhhhhcc---c-cccccccccccccccccc-----------ccccc
Confidence 7999999987653 34567889999999999999987 2 345555555554443221 23455
Q ss_pred cCCCCCCCCCCcchh-----HHHHHhh-----------cCCCceEEEecCCceEecCC
Q 028258 158 KEDSSRLPFPNFYYE-----LEDVSAS-----------YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 158 ~e~~~~~~~~~~~~~-----~e~~l~~-----------~~~~~~~~i~Rp~~i~G~~~ 199 (211)
+|+.+.. |...|. .|..+.. ...++.++++||+.+||+..
T Consensus 145 ~~~~~~~--p~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~ 200 (356)
T d1rkxa_ 145 RENEAMG--GYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGD 200 (356)
T ss_dssp CTTSCBC--CSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTC
T ss_pred ccccccC--CCCccccccccchhhhhHHhhhcccchhccccCceEEeccCCCeeCCCc
Confidence 6665532 222222 2222221 23578999999999999875
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.88 E-value=4.7e-23 Score=162.50 Aligned_cols=150 Identities=17% Similarity=0.088 Sum_probs=112.1
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCc--EEEEEeCCCCCCCC-CCCCceeEEEeeCCCHHHHHHHHHhccccc
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPW--KVYGAARRPPPGWF-PTALVDRYITFDALDPTDTALKLSLISQEI 83 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~--~V~~~~R~~~~~~~-~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~ 83 (211)
|++|+|||||||||||++|+++|+ ++|+ +|++++|++..... ....++ +..+|+.+.+++.+++++ +
T Consensus 12 m~~k~IlItGaTG~iG~~l~~~Ll-----~~g~~~~v~~~~R~~~~~~~~~~~~i~-~~~~D~~~~~~~~~~~~~----~ 81 (232)
T d2bkaa1 12 MQNKSVFILGASGETGRVLLKEIL-----EQGLFSKVTLIGRRKLTFDEEAYKNVN-QEVVDFEKLDDYASAFQG----H 81 (232)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHH-----HHTCCSEEEEEESSCCCCCSGGGGGCE-EEECCGGGGGGGGGGGSS----C
T ss_pred CCCCEEEEECCCcHHHHHHHHHHH-----hCCCCCEEEEEecChhhhcccccceee-eeeecccccccccccccc----c
Confidence 456899999999999999999999 4664 79999998765431 246677 788888887777666665 6
Q ss_pred ceEEeecccCCc--hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCC
Q 028258 84 TNLFWVPLQVQE--SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDS 161 (211)
Q Consensus 84 ~~v~~~a~~~~~--~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~ 161 (211)
|+++|+++.... ++...+++|+.++.++++++... ++++|+++|+...|..
T Consensus 82 d~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~-----~v~~fi~~Ss~~~~~~---------------------- 134 (232)
T d2bkaa1 82 DVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAG-----GCKHFNLLSSKGADKS---------------------- 134 (232)
T ss_dssp SEEEECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHT-----TCCEEEEECCTTCCTT----------------------
T ss_pred ccccccccccccccchhhhhhhcccccceeeeccccc-----CccccccCCccccccC----------------------
Confidence 889999987542 45567789999999999999886 6899999988654421
Q ss_pred CCCCCCCcc----hhHHHHHhhcCCCc-eEEEecCCceEecCC
Q 028258 162 SRLPFPNFY----YELEDVSASYSPAI-TYSVHRSSVIIGASP 199 (211)
Q Consensus 162 ~~~~~~~~~----~~~e~~l~~~~~~~-~~~i~Rp~~i~G~~~ 199 (211)
.+..| +..|+.+.+ .++ .++|+||+.+||+..
T Consensus 135 ----~~~~Y~~~K~~~E~~l~~--~~~~~~~IlRP~~i~G~~~ 171 (232)
T d2bkaa1 135 ----SNFLYLQVKGEVEAKVEE--LKFDRYSVFRPGVLLCDRQ 171 (232)
T ss_dssp ----CSSHHHHHHHHHHHHHHT--TCCSEEEEEECCEEECTTG
T ss_pred ----ccchhHHHHHHhhhcccc--ccccceEEecCceeecCCC
Confidence 11122 223555543 455 599999999999865
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Probab=99.87 E-value=1.6e-21 Score=161.23 Aligned_cols=170 Identities=13% Similarity=0.062 Sum_probs=118.1
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCC-cEEEEEeCCCCCC--CCCCCCceeEEEeeCCCHHHHHHHHHhcccccceEE
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSP-WKVYGAARRPPPG--WFPTALVDRYITFDALDPTDTALKLSLISQEITNLF 87 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g-~~V~~~~R~~~~~--~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~ 87 (211)
+|||||||||||++|+++|+ ++| ++|+++++..... ....++++ ++.+|+++.+++.+.+.. + +|+|+
T Consensus 2 KILITG~tGfiG~~l~~~Ll-----~~g~~~V~~ld~~~~~~~~~~~~~~~~-~i~~Di~~~~~~~~~~~~-~--~d~Vi 72 (342)
T d2blla1 2 RVLILGVNGFIGNHLTERLL-----REDHYEVYGLDIGSDAISRFLNHPHFH-FVEGDISIHSEWIEYHVK-K--CDVVL 72 (342)
T ss_dssp EEEEETCSSHHHHHHHHHHH-----HSTTCEEEEEESCCGGGGGGTTCTTEE-EEECCTTTCSHHHHHHHH-H--CSEEE
T ss_pred EEEEECCCcHHHHHHHHHHH-----HCCCCEEEEEeCCCcchhhhccCCCeE-EEECccCChHHHHHHHHh-C--CCccc
Confidence 59999999999999999998 466 6899998865421 12457899 999999988766554332 1 79999
Q ss_pred eecccCCc-----hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCCC
Q 028258 88 WVPLQVQE-----SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSS 162 (211)
Q Consensus 88 ~~a~~~~~-----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~~ 162 (211)
|+|+.... ++...+.+|+.++.++++++.+. +.+. ++.||+.+|+.+.. .... ...+.....+
T Consensus 73 h~a~~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~-----~~~~-~~~ss~~~~~~~~~---~~~~---~~~~~~~~~~ 140 (342)
T d2blla1 73 PLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKY-----RKRI-IFPSTSEVYGMCSD---KYFD---EDHSNLIVGP 140 (342)
T ss_dssp ECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHT-----TCEE-EEECCGGGGBTCCC---SSBC---TTTCCCBCCC
T ss_pred cccccccccccccCCccccccccccccccccccccc-----cccc-cccccccccccccc---cccc---cccccccccc
Confidence 99998653 23456899999999999999886 4444 57788888875422 0000 0111111111
Q ss_pred CCCCCCcchhHHHHHhh-------cCCCceEEEecCCceEecCCCCC
Q 028258 163 RLPFPNFYYELEDVSAS-------YSPAITYSVHRSSVIIGASPRSL 202 (211)
Q Consensus 163 ~~~~~~~~~~~e~~l~~-------~~~~~~~~i~Rp~~i~G~~~~~~ 202 (211)
...|...|...|.+.+ +..+++++++||+.+||+.....
T Consensus 141 -~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~r~~~~~g~~~~~~ 186 (342)
T d2blla1 141 -VNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNL 186 (342)
T ss_dssp -TTCGGGHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCT
T ss_pred -cCCCcchhhhcccchhhhhhhhhcccCceeEEeecccccccccccc
Confidence 1235555665555444 34589999999999999976543
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Probab=99.84 E-value=2.1e-20 Score=153.21 Aligned_cols=175 Identities=14% Similarity=0.024 Sum_probs=115.4
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHhccccc
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSLISQEI 83 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~ 83 (211)
+|||||||||||++|+++|+ ++||+|++++|-..... ...++++ ++.+|++|.+.+.+++++.. +
T Consensus 2 KILVTGatGfIGs~lv~~Ll-----~~g~~V~~id~~~~~~~~~~~~~~~~~~~~~-~i~~Di~~~~~l~~~~~~~~--~ 73 (338)
T d1orra_ 2 KLLITGGCGFLGSNLASFAL-----SQGIDLIVFDNLSRKGATDNLHWLSSLGNFE-FVHGDIRNKNDVTRLITKYM--P 73 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHH-----HTTCEEEEEECCCSTTHHHHHHHHHTTCCCE-EEECCTTCHHHHHHHHHHHC--C
T ss_pred EEEEECCCcHHHHHHHHHHH-----HCcCEEEEEECCCcccchhHHHHhhccCCcE-EEEcccCCHHHHHHHHHhcC--C
Confidence 69999999999999999999 68999999976322210 1246889 99999999999999999876 7
Q ss_pred ceEEeecccCCc-----hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCC----CCCC
Q 028258 84 TNLFWVPLQVQE-----SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQL----MPYE 154 (211)
Q Consensus 84 ~~v~~~a~~~~~-----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~----~~~~ 154 (211)
|+|||+|+.... ++...+++|+.||.+|++++... . ..++|++.|+...|+.+...+...... ....
T Consensus 74 d~Vih~aa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~---~-~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (338)
T d1orra_ 74 DSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQY---N-SNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKP 149 (338)
T ss_dssp SEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH---C-TTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCT
T ss_pred ceEEeecccccccccccChHHHHHHHHHHHHHHHHhhhcc---c-ccccccccccccccccccccccccccccccccccc
Confidence 999999988653 34567899999999999999987 2 334555555555554321100000000 0000
Q ss_pred CCCcCCCCCCCCCCcchhHHHHH-----hh--cCCCceEEEecCCceEecCC
Q 028258 155 VPFKEDSSRLPFPNFYYELEDVS-----AS--YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 155 ~~~~e~~~~~~~~~~~~~~e~~l-----~~--~~~~~~~~i~Rp~~i~G~~~ 199 (211)
....+..+. .|...|...+.. .. +..+...+++|+..+||+..
T Consensus 150 ~~~~~~~~~--~~~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (338)
T d1orra_ 150 NGYDESTQL--DFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQ 199 (338)
T ss_dssp TCBCTTSCC--CCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTC
T ss_pred cCcccCCcc--ccccccccccchhhhhhhhhhhccCcccccccccceeeccc
Confidence 011111211 123333333222 22 45688999999999997755
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Probab=99.84 E-value=2.9e-21 Score=160.05 Aligned_cols=170 Identities=16% Similarity=0.140 Sum_probs=116.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC---------CCCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW---------FPTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~---------~~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
.+|+|||||||||||++|+++|+ ++||+|+++.|+..+.. ....... .+.+|++|.+.+.+++.+
T Consensus 10 ~gk~VlVTG~sGfIGs~l~~~Ll-----~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~ 83 (342)
T d1y1pa1 10 EGSLVLVTGANGFVASHVVEQLL-----EHGYKVRGTARSASKLANLQKRWDAKYPGRFET-AVVEDMLKQGAYDEVIKG 83 (342)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEE-EECSCTTSTTTTTTTTTT
T ss_pred CcCEEEEECCCCHHHHHHHHHHH-----HCcCEEEEEeCCchhHHHHHHhhhccccccccE-EEeccccchhhhhhhccc
Confidence 36899999999999999999999 68999999999754310 0122334 677899999888777765
Q ss_pred cccccceEEeecccCC--chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCC
Q 028258 79 ISQEITNLFWVPLQVQ--ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVP 156 (211)
Q Consensus 79 ~~~~~~~v~~~a~~~~--~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~ 156 (211)
+++|+|+++... .++...++.|+.++.++++++.+. .++++|+++||+.+++.+..+ . ....
T Consensus 84 ----~~~v~~~a~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~----~~v~~~i~~SS~~~~~~~~~~----~----~~~~ 147 (342)
T d1y1pa1 84 ----AAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAAT----PSVKRFVLTSSTVSALIPKPN----V----EGIY 147 (342)
T ss_dssp ----CSEEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTC----TTCCEEEEECCGGGTCCCCTT----C----CCCE
T ss_pred ----chhhhhhcccccccccccccccchhhhHHHHHHhhhcc----cccccccccccceeeccCCCC----C----CCcc
Confidence 688999988754 245567788999999999999885 368999999886554322110 0 0111
Q ss_pred CcCCCCC-----------C---CCCCcchhHHHHHhh---------cCCCceEEEecCCceEecCC
Q 028258 157 FKEDSSR-----------L---PFPNFYYELEDVSAS---------YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 157 ~~e~~~~-----------~---~~~~~~~~~e~~l~~---------~~~~~~~~i~Rp~~i~G~~~ 199 (211)
.+|+... . ..|...|+..|...+ ...+++++++||+.+|||..
T Consensus 148 ~~e~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~~ 213 (342)
T d1y1pa1 148 LDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIF 213 (342)
T ss_dssp ECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCS
T ss_pred ccccccccccccccccccccCCCCCcCcccchhHhHHHHHHHhhhhcccccccceecccceeCCCC
Confidence 2222110 0 112233444433322 34678999999999999864
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Probab=99.83 E-value=4.5e-20 Score=147.77 Aligned_cols=148 Identities=15% Similarity=0.127 Sum_probs=109.5
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccceEEeec
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITNLFWVP 90 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~~~a 90 (211)
+|||||||||||++|+++|. ++||+|++++|+. +|+.|.+.+.+.+++.+ +|+|+|++
T Consensus 3 KIlItGasGfiG~~l~~~L~-----~~g~~Vi~~~r~~---------------~D~~d~~~~~~~l~~~~--~d~vih~a 60 (281)
T d1vl0a_ 3 KILITGANGQLGREIQKQLK-----GKNVEVIPTDVQD---------------LDITNVLAVNKFFNEKK--PNVVINCA 60 (281)
T ss_dssp EEEEESTTSHHHHHHHHHHT-----TSSEEEEEECTTT---------------CCTTCHHHHHHHHHHHC--CSEEEECC
T ss_pred EEEEECCCCHHHHHHHHHHH-----hCCCEEEEeechh---------------ccCCCHHHHHHHHHHcC--CCEEEeec
Confidence 49999999999999999999 7999999998752 47889999999998875 79999999
Q ss_pred ccCCc-----hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCCCCCC
Q 028258 91 LQVQE-----SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLP 165 (211)
Q Consensus 91 ~~~~~-----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~~~~~ 165 (211)
+.... .+......|...+.++.+.+... ...+++.|+..+|+.+ ...|..|.++.
T Consensus 61 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~------~~~~~~~ss~~v~~~~------------~~~~~~e~~~~-- 120 (281)
T d1vl0a_ 61 AHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSV------GAEIVQISTDYVFDGE------------AKEPITEFDEV-- 120 (281)
T ss_dssp CCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHH------TCEEEEEEEGGGSCSC------------CSSCBCTTSCC--
T ss_pred cccccccccccchhhcccccccccccccccccc------cccccccccceeeecc------------ccccccccccc--
Confidence 87653 23445677888888888877765 3455667777777643 13566777763
Q ss_pred CCCcchhHHHHHhh---cCCCceEEEecCCceEecCCC
Q 028258 166 FPNFYYELEDVSAS---YSPAITYSVHRSSVIIGASPR 200 (211)
Q Consensus 166 ~~~~~~~~e~~l~~---~~~~~~~~i~Rp~~i~G~~~~ 200 (211)
.+...|...+...+ +..+.+++++||+.+||++.+
T Consensus 121 ~~~~~~~~~k~~~e~~~~~~~~~~~i~R~~~vyG~~~~ 158 (281)
T d1vl0a_ 121 NPQSAYGKTKLEGENFVKALNPKYYIVRTAWLYGDGNN 158 (281)
T ss_dssp CCCSHHHHHHHHHHHHHHHHCSSEEEEEECSEESSSSC
T ss_pred cchhhhhhhhhHHHHHHHHhCCCccccceeEEeCCCcc
Confidence 23333433333322 346789999999999999753
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.81 E-value=4.9e-20 Score=142.70 Aligned_cols=145 Identities=17% Similarity=0.172 Sum_probs=99.6
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCc--EEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccceE
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPW--KVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITNL 86 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~--~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v 86 (211)
+|+|||||||||||++|+++|+ ++|+ +|++++|++... .+.+ ..+..|..++ .+.+...+|.|
T Consensus 2 ~KkIlItGatG~iG~~lv~~L~-----~~~~~~~v~~~~r~~~~~---~~~~----~~~~~d~~~~---~~~~~~~~d~v 66 (212)
T d2a35a1 2 PKRVLLAGATGLTGEHLLDRIL-----SEPTLAKVIAPARKALAE---HPRL----DNPVGPLAEL---LPQLDGSIDTA 66 (212)
T ss_dssp CCEEEEECTTSHHHHHHHHHHH-----HCTTCCEEECCBSSCCCC---CTTE----ECCBSCHHHH---GGGCCSCCSEE
T ss_pred CCEEEEECCCcHHHHHHHHHHH-----hCCCeEEEEEEeCCchhh---cccc----cccccchhhh---hhccccchhee
Confidence 5899999999999999999999 5776 677788776532 2333 3445554433 33333237899
Q ss_pred EeecccCC---chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCCCC
Q 028258 87 FWVPLQVQ---ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSR 163 (211)
Q Consensus 87 ~~~a~~~~---~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~~~ 163 (211)
++|++... .......+.|+.++.++++++++. ++++|++.|+..+|..
T Consensus 67 i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~-----~v~~~i~~Ss~~~~~~------------------------ 117 (212)
T d2a35a1 67 FCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEM-----GARHYLVVSALGADAK------------------------ 117 (212)
T ss_dssp EECCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHT-----TCCEEEEECCTTCCTT------------------------
T ss_pred eeeeeeeccccccccccccchhhhhhhcccccccc-----cccccccccccccccc------------------------
Confidence 99987643 234456788999999999999986 7899999987654421
Q ss_pred CCCCCcchhHHHHHhh---cCCCc-eEEEecCCceEecCCC
Q 028258 164 LPFPNFYYELEDVSAS---YSPAI-TYSVHRSSVIIGASPR 200 (211)
Q Consensus 164 ~~~~~~~~~~e~~l~~---~~~~~-~~~i~Rp~~i~G~~~~ 200 (211)
+..+|...|...| ...++ +|+|+||+.|||+...
T Consensus 118 ---~~~~y~~~K~~~E~~l~~~~~~~~~I~Rp~~v~G~~~~ 155 (212)
T d2a35a1 118 ---SSIFYNRVKGELEQALQEQGWPQLTIARPSLLFGPREE 155 (212)
T ss_dssp ---CSSHHHHHHHHHHHHHTTSCCSEEEEEECCSEESTTSC
T ss_pred ---cccchhHHHHHHhhhccccccccceeeCCcceeCCccc
Confidence 1122333333322 24566 6999999999998753
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.78 E-value=4.5e-19 Score=137.89 Aligned_cols=157 Identities=15% Similarity=0.087 Sum_probs=106.4
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCc--EEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccceE
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPW--KVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITNL 86 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~--~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v 86 (211)
.++|||||||||||++++++|+ ++|+ .|+++.|++.+......+++ ++.+|+++.+.+.+++++ +|.|
T Consensus 3 ~~tVlVtGatG~iG~~l~~~Ll-----~~g~~v~v~~~~R~~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~~----~d~v 72 (252)
T d2q46a1 3 LPTVLVTGASGRTGQIVYKKLK-----EGSDKFVAKGLVRSAQGKEKIGGEAD-VFIGDITDADSINPAFQG----IDAL 72 (252)
T ss_dssp CCEEEEESTTSTTHHHHHHHHH-----HTTTTCEEEEEESCHHHHHHTTCCTT-EEECCTTSHHHHHHHHTT----CSEE
T ss_pred CCEEEEECCccHHHHHHHHHHH-----HCCCcEEEEEEcCCHHHHHhccCCcE-EEEeeecccccccccccc----ceee
Confidence 3889999999999999999999 5675 47778887654222246788 999999999999999886 6789
Q ss_pred EeecccCCc------------------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccC
Q 028258 87 FWVPLQVQE------------------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAG 148 (211)
Q Consensus 87 ~~~a~~~~~------------------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g 148 (211)
+|+++.... .......+|+.++.+++...... ...++.+.++...+.
T Consensus 73 i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~s~~~~~~---------- 137 (252)
T d2q46a1 73 VILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA-----GVKHIVVVGSMGGTN---------- 137 (252)
T ss_dssp EECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH-----TCSEEEEEEETTTTC----------
T ss_pred EEEEeeccccccccchhhhhhcccccccchhhhccccccceeeccccccc-----cccccccccccccCC----------
Confidence 999865221 22335678899999999988876 445555555432211
Q ss_pred CCCCCCCCCcCCCCCCCCCCcchhHHHHHhh---cCCCceEEEecCCceEecCCC
Q 028258 149 QLMPYEVPFKEDSSRLPFPNFYYELEDVSAS---YSPAITYSVHRSSVIIGASPR 200 (211)
Q Consensus 149 ~~~~~~~~~~e~~~~~~~~~~~~~~e~~l~~---~~~~~~~~i~Rp~~i~G~~~~ 200 (211)
+ ..+........+...+...+ ...+++++++||+.+||+...
T Consensus 138 -------~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~ 182 (252)
T d2q46a1 138 -------P---DHPLNKLGNGNILVWKRKAEQYLADSGTPYTIIRAGGLLDKEGG 182 (252)
T ss_dssp -------T---TCGGGGGGGCCHHHHHHHHHHHHHHSSSCEEEEEECEEECSCTT
T ss_pred -------C---CcccccccccchhhhhhhhhhhhhcccccceeecceEEECCCcc
Confidence 0 11100011122222222222 457999999999999998753
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Probab=99.74 E-value=1e-17 Score=134.51 Aligned_cols=146 Identities=15% Similarity=0.151 Sum_probs=100.8
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccceEEeec
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITNLFWVP 90 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~~~a 90 (211)
+|||||||||||++|+++|. +.|+ ++.+.++.. .+.+|++|.+.+.+.+++.+ +|+|||||
T Consensus 2 KILItG~tGfiG~~l~~~L~-----~~g~-~v~~~~~~~-----------~~~~Dl~~~~~~~~~i~~~~--~D~Vih~A 62 (298)
T d1n2sa_ 2 NILLFGKTGQVGWELQRSLA-----PVGN-LIALDVHSK-----------EFCGDFSNPKGVAETVRKLR--PDVIVNAA 62 (298)
T ss_dssp EEEEECTTSHHHHHHHHHTT-----TTSE-EEEECTTCS-----------SSCCCTTCHHHHHHHHHHHC--CSEEEECC
T ss_pred EEEEECCCCHHHHHHHHHHH-----hCCC-EEEEECCCc-----------cccCcCCCHHHHHHHHHHcC--CCEEEEec
Confidence 49999999999999999999 5775 555655533 22479999999999998876 89999999
Q ss_pred ccCCc-----hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCCCCCC
Q 028258 91 LQVQE-----SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLP 165 (211)
Q Consensus 91 ~~~~~-----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~~~~~ 165 (211)
+.... .+...+.+|+.++.++++++... +. ++++.||+.+|+.+ ...|.+|+.+..
T Consensus 63 a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~-~~~~~ss~~~~~~~------------~~~~~~E~~~~~- 123 (298)
T d1n2sa_ 63 AHTAVDKAESEPELAQLLNATSVEAIAKAANET-----GA-WVVHYSTDYVFPGT------------GDIPWQETDATS- 123 (298)
T ss_dssp CCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTT-----TC-EEEEEEEGGGSCCC------------TTCCBCTTSCCC-
T ss_pred ccccccccccCccccccccccccccchhhhhcc-----cc-ccccccccccccCC------------CCCCCccccccC-
Confidence 87542 44557788999999999999875 33 45666776676532 246778888743
Q ss_pred CCCcchhH-----HHHHhhcCCCceEEEecCCceEec
Q 028258 166 FPNFYYEL-----EDVSASYSPAITYSVHRSSVIIGA 197 (211)
Q Consensus 166 ~~~~~~~~-----e~~l~~~~~~~~~~i~Rp~~i~G~ 197 (211)
|...|.. |+.+.. ......++|++..|+.
T Consensus 124 -p~~~y~~~k~~~e~~~~~--~~~~~~~~~~~~~~~~ 157 (298)
T d1n2sa_ 124 -PLNVYGKTKLAGEKALQD--NCPKHLIFRTSWVYAG 157 (298)
T ss_dssp -CSSHHHHHHHHHHHHHHH--HCSSEEEEEECSEECS
T ss_pred -CCchHhhhhhhhhhhHHh--hhcccccccccceeec
Confidence 3333332 333332 2223455555555543
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Probab=99.72 E-value=8.4e-18 Score=135.67 Aligned_cols=154 Identities=14% Similarity=0.024 Sum_probs=102.0
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC---------CCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW---------FPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~---------~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
|++|||||||||||++|+++|+ +.||+|++++|++.... ....+++ ++.+|+.|.+.+...+.+
T Consensus 3 k~KILVtGatG~iG~~l~~~L~-----~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~-~v~~d~~d~~~~~~~~~~- 75 (312)
T d1qyda_ 3 KSRVLIVGGTGYIGKRIVNASI-----SLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAK-LIEASLDDHQRLVDALKQ- 75 (312)
T ss_dssp CCCEEEESTTSTTHHHHHHHHH-----HTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCE-EECCCSSCHHHHHHHHTT-
T ss_pred CCEEEEECCCCHHHHHHHHHHH-----hCCCEEEEEECCCcccchhHHHHHhhhccCCcE-EEEeecccchhhhhhccC-
Confidence 5679999999999999999999 68999999999765421 1246789 999999999999888887
Q ss_pred ccccceEEeecccCCchhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcC
Q 028258 80 SQEITNLFWVPLQVQESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKE 159 (211)
Q Consensus 80 ~~~~~~v~~~a~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e 159 (211)
.+.++++++.... ..|..++.++++++... ...++ ++.|+...+. ..+
T Consensus 76 ---~~~~~~~~~~~~~------~~~~~~~~~~l~~a~~~----~~~~~-v~~Ss~g~~~------------------~~~ 123 (312)
T d1qyda_ 76 ---VDVVISALAGGVL------SHHILEQLKLVEAIKEA----GNIKR-FLPSEFGMDP------------------DIM 123 (312)
T ss_dssp ---CSEEEECCCCSSS------STTTTTHHHHHHHHHHS----CCCSE-EECSCCSSCT------------------TSC
T ss_pred ---cchhhhhhhhccc------ccchhhhhHHHHHHHHh----cCCcE-EEEeeccccC------------------CCc
Confidence 4567777654322 23444556778888775 23444 4444422211 111
Q ss_pred CCCCCCCCCcchhHHHHHhh--cCCCceEEEecCCceEecCCCCC
Q 028258 160 DSSRLPFPNFYYELEDVSAS--YSPAITYSVHRSSVIIGASPRSL 202 (211)
Q Consensus 160 ~~~~~~~~~~~~~~e~~l~~--~~~~~~~~i~Rp~~i~G~~~~~~ 202 (211)
..+. .+...++..+....+ ...+++|+++||+.+||+..+.+
T Consensus 124 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~~~~g~~~~~~ 167 (312)
T d1qyda_ 124 EHAL-QPGSITFIDKRKVRRAIEAASIPYTYVSSNMFAGYFAGSL 167 (312)
T ss_dssp CCCC-SSTTHHHHHHHHHHHHHHHTTCCBCEEECCEEHHHHTTTS
T ss_pred cccc-chhhhhhHHHHHHHHhhcccccceEEeccceeecCCccch
Confidence 1221 112233333222222 35789999999999999876543
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Probab=99.71 E-value=1.3e-17 Score=133.53 Aligned_cols=151 Identities=14% Similarity=0.067 Sum_probs=100.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCC----------CCCCceeEEEeeCCCHHHHHHHHH
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF----------PTALVDRYITFDALDPTDTALKLS 77 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~----------~~~~~~~~i~~Dl~d~~~~~~~~~ 77 (211)
.+|+|||||||||||++++++|+ +.||+|++++|++..... ...+++ ++.+|+.+...+.+.++
T Consensus 2 ~kkKILVtGatG~iG~~l~~~L~-----~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~ 75 (307)
T d1qyca_ 2 SRSRILLIGATGYIGRHVAKASL-----DLGHPTFLLVRESTASSNSEKAQLLESFKASGAN-IVHGSIDDHASLVEAVK 75 (307)
T ss_dssp CCCCEEEESTTSTTHHHHHHHHH-----HTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCE-EECCCTTCHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHH-----HCCCeEEEEECCCccccchhHHHHHHhhccCCcE-EEEeecccchhhhhhhh
Confidence 36889999999999999999999 689999999997664211 135788 99999999998888887
Q ss_pred hcccccceEEeecccCCchhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCC
Q 028258 78 LISQEITNLFWVPLQVQESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPF 157 (211)
Q Consensus 78 ~~~~~~~~v~~~a~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~ 157 (211)
+ ++.++|+++... ..++.++++++... ..+++++.|+...+ .
T Consensus 76 ~----~~~vi~~~~~~~----------~~~~~~~~~a~~~~-----~~~~~~~~s~~~~~-------------------~ 117 (307)
T d1qyca_ 76 N----VDVVISTVGSLQ----------IESQVNIIKAIKEV-----GTVKRFFPSEFGND-------------------V 117 (307)
T ss_dssp T----CSEEEECCCGGG----------SGGGHHHHHHHHHH-----CCCSEEECSCCSSC-------------------T
T ss_pred h----ceeeeecccccc----------cchhhHHHHHHHHh-----ccccceeeeccccc-------------------c
Confidence 6 467777775432 22334567777776 44565666552111 1
Q ss_pred cCCCCCCCCCCcchh----HHHHHhhcCCCceEEEecCCceEecCCCCCCCC
Q 028258 158 KEDSSRLPFPNFYYE----LEDVSASYSPAITYSVHRSSVIIGASPRSLYXX 205 (211)
Q Consensus 158 ~e~~~~~~~~~~~~~----~e~~l~~~~~~~~~~i~Rp~~i~G~~~~~~~~~ 205 (211)
++.... .....++. .+..+ ...+++++++||+.+||+....+...
T Consensus 118 ~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~i~r~~~v~g~~~~~~~~~ 166 (307)
T d1qyca_ 118 DNVHAV-EPAKSVFEVKAKVRRAI--EAEGIPYTYVSSNCFAGYFLRSLAQA 166 (307)
T ss_dssp TSCCCC-TTHHHHHHHHHHHHHHH--HHHTCCBEEEECCEEHHHHTTTTTCT
T ss_pred cccccc-ccccccccccccccchh--hccCCCceecccceecCCCccchhhh
Confidence 111111 11111221 22333 34788999999999999876554443
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Probab=99.68 E-value=8.2e-17 Score=129.46 Aligned_cols=161 Identities=13% Similarity=0.100 Sum_probs=97.8
Q ss_pred EEEEcCCChHHHHHHHHhhCCCCCCCCc-EEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHH-HHHhcc-cccceEEe
Q 028258 12 ALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRPPPGWFPTALVDRYITFDALDPTDTAL-KLSLIS-QEITNLFW 88 (211)
Q Consensus 12 ilVtGatG~iG~~l~~~L~~~~~~~~g~-~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~-~~~~~~-~~~~~v~~ 88 (211)
|||||||||||++|+++|+ ++|+ +|+++++-..... .....+ ...+|..+.+.... .+.... ..+++|+|
T Consensus 2 ILITGgsGfIGs~lv~~L~-----~~g~~~V~~~d~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 74 (307)
T d1eq2a_ 2 IIVTGGAGFIGSNIVKALN-----DKGITDILVVDNLKDGTK-FVNLVD-LNIADYMDKEDFLIQIMAGEEFGDVEAIFH 74 (307)
T ss_dssp EEEETTTSHHHHHHHHHHH-----TTTCCCEEEEECCSSGGG-GHHHHT-SCCSEEEEHHHHHHHHHTTCCCSSCCEEEE
T ss_pred EEEecCccHHHHHHHHHHH-----hCCCCeEEEEECCCCcch-hhcccc-cchhhhccchHHHHHHhhhhcccchhhhhh
Confidence 8999999999999999999 6786 6988875322110 001112 22334444443322 222211 12778889
Q ss_pred ecccCCc---hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCCCCCC
Q 028258 89 VPLQVQE---SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLP 165 (211)
Q Consensus 89 ~a~~~~~---~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~~~~~ 165 (211)
+|+.... ........|+.++.++++++... +++. ++.|+..+|+++. ..+..++.+ .
T Consensus 75 ~aa~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~i~~-v~~ss~~~~~~~~------------~~~~~~~~~--~ 134 (307)
T d1eq2a_ 75 EGACSSTTEWDGKYMMDNNYQYSKELLHYCLER-----EIPF-LYASSAATYGGRT------------SDFIESREY--E 134 (307)
T ss_dssp CCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHH-----TCCE-EEEEEGGGGTTCC------------SCBCSSGGG--C
T ss_pred hcccccccccccccccccccccccccccccccc-----cccc-ccccccccccccc------------ccccccccc--c
Confidence 8875432 34456688899999999999887 5565 4555555554331 122233332 1
Q ss_pred CCCcchhH-----HHHHhh--cCCCceEEEecCCceEecCC
Q 028258 166 FPNFYYEL-----EDVSAS--YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 166 ~~~~~~~~-----e~~l~~--~~~~~~~~i~Rp~~i~G~~~ 199 (211)
.|...|.. |+++.+ ...+++++++||+.+|||..
T Consensus 135 ~~~~~Y~~~K~~~e~~~~~~~~~~~~~~~~~r~~~vyGp~~ 175 (307)
T d1eq2a_ 135 KPLNVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPRE 175 (307)
T ss_dssp CCSSHHHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSC
T ss_pred ccccccccccchhhhhccccccccccccccccceeEeeccc
Confidence 23333443 344433 46789999999999999865
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Probab=99.63 E-value=1.2e-15 Score=125.86 Aligned_cols=149 Identities=10% Similarity=-0.023 Sum_probs=95.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC----CCCCCceeEEEeeCCCHHH-HHHHHHhcccc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW----FPTALVDRYITFDALDPTD-TALKLSLISQE 82 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~----~~~~~~~~~i~~Dl~d~~~-~~~~~~~~~~~ 82 (211)
++|+|||||||||||++|+++|+ +.||+|+++.|++.+.. ...++++ .+.+|++|+.+ +..++.+.
T Consensus 2 ~kktIlVtGatG~iG~~lv~~Ll-----~~G~~V~~l~R~~~~~~~~~~~~~~~v~-~~~gD~~d~~~~~~~a~~~~--- 72 (350)
T d1xgka_ 2 QKKTIAVVGATGRQGASLIRVAA-----AVGHHVRAQVHSLKGLIAEELQAIPNVT-LFQGPLLNNVPLMDTLFEGA--- 72 (350)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHH-----HTTCCEEEEESCSCSHHHHHHHTSTTEE-EEESCCTTCHHHHHHHHTTC---
T ss_pred CCCEEEEECCChHHHHHHHHHHH-----hCCCeEEEEECCcchhhhhhhcccCCCE-EEEeeCCCcHHHHHHHhcCC---
Confidence 57999999999999999999999 68999999999876521 1346899 99999999654 55666653
Q ss_pred cceEEeecccCCchhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCCC
Q 028258 83 ITNLFWVPLQVQESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSS 162 (211)
Q Consensus 83 ~~~v~~~a~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~~ 162 (211)
+.+++..... ...+...+.++++++... +++++++.||...... ..+ ....
T Consensus 73 -~~~~~~~~~~-------~~~~~~~~~~~~~aa~~a-----gv~~~v~~Ss~~~~~~--------------~~~-~~~~- 123 (350)
T d1xgka_ 73 -HLAFINTTSQ-------AGDEIAIGKDLADAAKRA-----GTIQHYIYSSMPDHSL--------------YGP-WPAV- 123 (350)
T ss_dssp -SEEEECCCST-------TSCHHHHHHHHHHHHHHH-----SCCSEEEEEECCCGGG--------------TSS-CCCC-
T ss_pred -ceEEeecccc-------cchhhhhhhHHHHHHHHh-----CCCceEEEeecccccc--------------CCc-ccch-
Confidence 4444333221 123555667899999887 4555555555322110 000 0000
Q ss_pred CCCCCCcchhHHHHHhhcCCCceEEEecCCceEecC
Q 028258 163 RLPFPNFYYELEDVSASYSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 163 ~~~~~~~~~~~e~~l~~~~~~~~~~i~Rp~~i~G~~ 198 (211)
+........+.++ ...+.+++++||+.+++..
T Consensus 124 --~~~~~k~~~~~~~--~~~~~~~~~vr~~~~~~~~ 155 (350)
T d1xgka_ 124 --PMWAPKFTVENYV--RQLGLPSTFVYAGIYNNNF 155 (350)
T ss_dssp --TTTHHHHHHHHHH--HTSSSCEEEEEECEEGGGC
T ss_pred --hhhhhHHHHHHHH--HhhccCceeeeeceeeccc
Confidence 0001112233333 3478899999999988754
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.61 E-value=4e-15 Score=117.13 Aligned_cols=117 Identities=16% Similarity=0.065 Sum_probs=90.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhccc---ccc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQ---EIT 84 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~---~~~ 84 (211)
++|++|||||++.||++++++|+ ++|++|++++|+.... .++. .+.+|++|++++++.++.+.. .+|
T Consensus 6 ~gK~~lITGas~GIG~aia~~la-----~~Ga~V~~~~r~~~~~----~~~~-~~~~Dv~~~~~v~~~~~~~~~~~g~iD 75 (237)
T d1uzma1 6 VSRSVLVTGGNRGIGLAIAQRLA-----ADGHKVAVTHRGSGAP----KGLF-GVEVDVTDSDAVDRAFTAVEEHQGPVE 75 (237)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHH-----HTTCEEEEEESSSCCC----TTSE-EEECCTTCHHHHHHHHHHHHHHHSSCS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEECCcchh----cCce-EEEEecCCHHHHHHHHHHHHHhcCCce
Confidence 57999999999999999999999 7999999999987643 5677 899999999988777765532 389
Q ss_pred eEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 85 NLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 85 ~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
.+||+|+... ++|+..+++|+.++..+.+++...+... +-.+++++||..
T Consensus 76 iLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~g~Iv~isS~~ 134 (237)
T d1uzma1 76 VLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRN-KFGRMIFIGSVS 134 (237)
T ss_dssp EEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEECCCC
T ss_pred EEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhccccc-CCCceEEEcchh
Confidence 9999998632 2567788999988777766554332111 345788888754
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.60 E-value=1.5e-15 Score=120.06 Aligned_cols=120 Identities=13% Similarity=0.035 Sum_probs=91.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC---CCCCCceeEEEeeCCCHHHHHHHHHhcccccc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW---FPTALVDRYITFDALDPTDTALKLSLISQEIT 84 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~---~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~ 84 (211)
.+|++|||||++.||++++++|+ ++|++|++++|+++... ...++++ .+.+|++|++++++.++.+.. +|
T Consensus 6 ~GK~~lITGas~GIG~aia~~la-----~~G~~V~~~~r~~~~l~~~~~~~~~~~-~~~~Dv~d~~~v~~~~~~~g~-iD 78 (244)
T d1pr9a_ 6 AGRRVLVTGAGKGIGRGTVQALH-----ATGARVVAVSRTQADLDSLVRECPGIE-PVCVDLGDWEATERALGSVGP-VD 78 (244)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHSTTCE-EEECCTTCHHHHHHHHTTCCC-CC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHH-----HcCCEEEEEECCHHHHHHHHHhcCCCe-EEEEeCCCHHHHHHHHHHhCC-ce
Confidence 57999999999999999999999 79999999999865421 1235688 999999999999999988865 99
Q ss_pred eEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 85 NLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 85 ~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
++||+|+... .+|...+++|+.++..+.+.+.+.+-...+-.+++.+||.
T Consensus 79 ilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~ 137 (244)
T d1pr9a_ 79 LLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQ 137 (244)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCG
T ss_pred EEEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccc
Confidence 9999997643 2566778999988777777654321001123577777764
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=99.59 E-value=4.8e-15 Score=116.99 Aligned_cols=119 Identities=13% Similarity=0.039 Sum_probs=90.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC--CCCCCceeEEEeeCCCHHHHHHHHHhccc---c
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW--FPTALVDRYITFDALDPTDTALKLSLISQ---E 82 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~--~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~---~ 82 (211)
.+|++|||||++.||++++++|+ ++|++|++++|++.+.. ...-+.+ .+.+|++|++++++.++.+.. .
T Consensus 4 ~gK~~lITGas~GIG~aia~~l~-----~~G~~V~~~~r~~~~l~~~~~~~~~~-~~~~Dv~~~~~v~~~~~~~~~~~g~ 77 (242)
T d1ulsa_ 4 KDKAVLITGAAHGIGRATLELFA-----KEGARLVACDIEEGPLREAAEAVGAH-PVVMDVADPASVERGFAEALAHLGR 77 (242)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHTTTCE-EEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHcCCe-EEEEecCCHHHHHHHHHHHHHhcCC
Confidence 56999999999999999999999 79999999999865321 1234678 899999999988887765532 3
Q ss_pred cceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeec
Q 028258 83 ITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTG 133 (211)
Q Consensus 83 ~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~ 133 (211)
+|++||+|+... .+|+..+++|+.++..+.+++.+.+... +-..++.+|+
T Consensus 78 iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~~~i~~~ss 136 (242)
T d1ulsa_ 78 LDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREK-NPGSIVLTAS 136 (242)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-CCEEEEEECC
T ss_pred ceEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhcccccccc-ccceeeeecc
Confidence 899999998643 1567788999999888888776654222 2344555554
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=99.56 E-value=6e-15 Score=117.30 Aligned_cols=127 Identities=9% Similarity=-0.075 Sum_probs=92.0
Q ss_pred CccccCC--CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHH
Q 028258 1 MEKQDQN--PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTD 71 (211)
Q Consensus 1 ~~~~~~~--~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~ 71 (211)
|-+|+.| .+|++|||||++.||++++++|+ ++|++|++++|++++.. ....++. .+.+|++|+++
T Consensus 1 m~~~d~m~L~gK~alITGas~GIG~aia~~la-----~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~-~~~~Dvs~~~~ 74 (255)
T d1fmca_ 1 MFNSDNLRLDGKCAIITGAGAGIGKEIAITFA-----TAGASVVVSDINADAANHVVDEIQQLGGQAF-ACRCDITSEQE 74 (255)
T ss_dssp CCCGGGGCCTTCEEEETTTTSHHHHHHHHHHH-----TTTCEEEEEESCHHHHHHHHHHHHHTTCCEE-EEECCTTCHHH
T ss_pred CCCCCCCCCCCCEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHHHHcCCcEE-EEEccCCCHHH
Confidence 4445544 57999999999999999999999 79999999999765311 1235678 89999999988
Q ss_pred HHHHHHhccc---ccceEEeecccCC--------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 72 TALKLSLISQ---EITNLFWVPLQVQ--------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 72 ~~~~~~~~~~---~~~~v~~~a~~~~--------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
+.+.++.+.. .+|.++|+|+... .+|+..+++|+.++..+.+++...+... +-.+++.+||.
T Consensus 75 ~~~~~~~~~~~~g~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~g~Ii~isS~ 147 (255)
T d1fmca_ 75 LSALADFAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKN-GGGVILTITSM 147 (255)
T ss_dssp HHHHHHHHHHHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCG
T ss_pred HHHHHHHHHHHcCCCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhccc-ccccccccccc
Confidence 8777655421 3899999998643 2566778999998877777665443111 22456666664
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=99.56 E-value=7e-15 Score=116.45 Aligned_cols=121 Identities=11% Similarity=-0.048 Sum_probs=91.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-CCCCCceeEEEeeCCCHHHHHHHHHhccc---cc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-FPTALVDRYITFDALDPTDTALKLSLISQ---EI 83 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~---~~ 83 (211)
.+|++|||||++.||++++++|+ ++|++|++++|+++... ....+.. .+.+|++|++++++.++.+.. .+
T Consensus 4 ~GK~alITGas~GIG~aia~~la-----~~G~~V~~~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~v~~~~~~~~~~~G~i 77 (248)
T d2d1ya1 4 AGKGVLVTGGARGIGRAIAQAFA-----REGALVALCDLRPEGKEVAEAIGGA-FFQVDLEDERERVRFVEEAAYALGRV 77 (248)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESSTTHHHHHHHHTCE-EEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHcCCe-EEEEeCCCHHHHHHHHHHHHHhcCCC
Confidence 47999999999999999999999 79999999999865321 1123557 889999999888777765421 38
Q ss_pred ceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 84 TNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 84 ~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
|.+||+|+... ++|+..+++|+.++.++.+++.+.+... +-.+++.++|..
T Consensus 78 DiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~-~~G~Ii~isS~~ 137 (248)
T d2d1ya1 78 DVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKV-GGGAIVNVASVQ 137 (248)
T ss_dssp CEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTT-TCEEEEEECCGG
T ss_pred CeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhccccccc-cccccccccccc
Confidence 99999998632 2566788999999888888776654212 235778877743
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.55 E-value=5.4e-15 Score=116.70 Aligned_cols=120 Identities=17% Similarity=0.027 Sum_probs=91.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC---CCCCCceeEEEeeCCCHHHHHHHHHhcccccc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW---FPTALVDRYITFDALDPTDTALKLSLISQEIT 84 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~---~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~ 84 (211)
.+|++|||||++.||++++++|+ ++|++|++++|++++.. ...++++ .+.+|++|++++++.++.+.. +|
T Consensus 4 ~GK~alITGas~GIG~aia~~la-----~~Ga~V~~~~r~~~~l~~~~~~~~~~~-~~~~Dv~~~~~v~~~~~~~g~-iD 76 (242)
T d1cyda_ 4 SGLRALVTGAGKGIGRDTVKALH-----ASGAKVVAVTRTNSDLVSLAKECPGIE-PVCVDLGDWDATEKALGGIGP-VD 76 (242)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHSTTCE-EEECCTTCHHHHHHHHTTCCC-CS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHhcCCCe-EEEEeCCCHHHHHHHHHHcCC-Ce
Confidence 47999999999999999999999 79999999999865321 1235788 999999999999999998865 99
Q ss_pred eEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 85 NLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 85 ~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
++||+|+.... +|+..+++|+.++..+.+.+.+.+.....-.+++.++|.
T Consensus 77 ilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~ 135 (242)
T d1cyda_ 77 LLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSM 135 (242)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCG
T ss_pred EEEECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchh
Confidence 99999986331 466678999998888777554321001123467777664
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=99.54 E-value=2.4e-14 Score=113.43 Aligned_cols=121 Identities=13% Similarity=0.013 Sum_probs=91.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC------CCCCCceeEEEeeCCCHHHHHHHHHhccc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW------FPTALVDRYITFDALDPTDTALKLSLISQ 81 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~ 81 (211)
.+|++|||||++.||+++++.|+ ++|++|++++|+++... ....++. ++.+|++|++++.+.++.+..
T Consensus 5 ~gK~alVTGas~GIG~aia~~la-----~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~v~~~~~~~~~ 78 (251)
T d1zk4a1 5 DGKVAIITGGTLGIGLAIATKFV-----EEGAKVMITGRHSDVGEKAAKSVGTPDQIQ-FFQHDSSDEDGWTKLFDATEK 78 (251)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHCCTTTEE-EEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHhCCCCcEE-EEEccCCCHHHHHHHHHHHHH
Confidence 46999999999999999999999 79999999999765311 1235788 999999999988777765432
Q ss_pred ---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 82 ---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 82 ---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
.+|++||+|+... .+|...+++|+.++..+.+++...+.....-.+++.+||.
T Consensus 79 ~~G~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~ 143 (251)
T d1zk4a1 79 AFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSI 143 (251)
T ss_dssp HHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCG
T ss_pred HhCCceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeecc
Confidence 3899999997642 2466788999999888888776554222222467777764
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=99.54 E-value=9.4e-15 Score=116.09 Aligned_cols=120 Identities=13% Similarity=-0.031 Sum_probs=88.3
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHhccc
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSLISQ 81 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~ 81 (211)
||++|||||++.||++++++|+ ++|++|++++|++++.. ....++. .+.+|++|++++.+.++.+..
T Consensus 1 KKValITGas~GIG~aia~~la-----~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~-~~~~Dv~~~~~v~~~~~~~~~ 74 (255)
T d1gega_ 1 KKVALVTGAGQGIGKAIALRLV-----KDGFAVAIADYNDATAKAVASEINQAGGHAV-AVKVDVSDRDQVFAAVEQARK 74 (255)
T ss_dssp CCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHHHTTCCEE-EEECCTTSHHHHHHHHHHHHH
T ss_pred CCEEEEcCCccHHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHHHhcCCcEE-EEEeeCCCHHHHHHHHHHHHH
Confidence 5778999999999999999999 69999999999865311 1235677 889999999988777765432
Q ss_pred ---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 82 ---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 82 ---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
.+|++||+|+... .+|+..+++|+.++.++.+++...+....+-.+++.+||.
T Consensus 75 ~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~ 139 (255)
T d1gega_ 75 TLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQ 139 (255)
T ss_dssp HTTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCG
T ss_pred HhCCccEEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccch
Confidence 3999999997632 2466788999998888877654321001233567777664
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.53 E-value=8.6e-14 Score=110.00 Aligned_cols=105 Identities=12% Similarity=0.068 Sum_probs=80.2
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCC--cEEEEEeCCCCCCC----CCCCCceeEEEeeCCCHHHHHHHHHhcc
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSP--WKVYGAARRPPPGW----FPTALVDRYITFDALDPTDTALKLSLIS 80 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g--~~V~~~~R~~~~~~----~~~~~~~~~i~~Dl~d~~~~~~~~~~~~ 80 (211)
|.+|+|||||||++||.+++++|+ ++| +.|++..|+.++.. ....+++ ++.+|++|.+++++.++.+.
T Consensus 1 M~~KtilITGassGIG~a~a~~la-----~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~-~~~~Dvs~~~~v~~~~~~i~ 74 (250)
T d1yo6a1 1 MSPGSVVVTGANRGIGLGLVQQLV-----KDKNIRHIIATARDVEKATELKSIKDSRVH-VLPLTVTCDKSLDTFVSKVG 74 (250)
T ss_dssp CCCSEEEESSCSSHHHHHHHHHHH-----TCTTCCEEEEEESSGGGCHHHHTCCCTTEE-EEECCTTCHHHHHHHHHHHH
T ss_pred CcCCEEEEeCCCCHHHHHHHHHHH-----HCCCCCEEEEEeCCHHHHHHHHHhhCCceE-EEEEecCCHHHHHHHHHHHH
Confidence 345999999999999999999999 567 47888899876431 2346788 99999999988877765542
Q ss_pred c-----ccceEEeecccCCc----------hhHHHHhhcHHHHHHHHHHHHh
Q 028258 81 Q-----EITNLFWVPLQVQE----------SEEVNIFKNSTMLKNVLSVLVS 117 (211)
Q Consensus 81 ~-----~~~~v~~~a~~~~~----------~~~~~~~~n~~~~~~l~~~~~~ 117 (211)
. .+|++|++|+.... ++.+.+++|+.++..+.+.+..
T Consensus 75 ~~~~~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p 126 (250)
T d1yo6a1 75 EIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLP 126 (250)
T ss_dssp HHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHH
T ss_pred HHhCCCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 1 28999999985221 3556789999998887777654
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=99.53 E-value=1.3e-14 Score=115.20 Aligned_cols=121 Identities=12% Similarity=-0.033 Sum_probs=91.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC----CCCCCceeEEEeeCCCHHHHHHHHHhccc--
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW----FPTALVDRYITFDALDPTDTALKLSLISQ-- 81 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~----~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~-- 81 (211)
.+|++|||||++.||++++++|+ ++|++|++++|++++.. .....+. ++.+|++|++++.+.++.+..
T Consensus 4 ~gK~alVTGas~GIG~aia~~la-----~~Ga~V~~~~r~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~v~~~~~~~~~~~ 77 (254)
T d1hdca_ 4 SGKTVIITGGARGLGAEAARQAV-----AAGARVVLADVLDEEGAATARELGDAAR-YQHLDVTIEEDWQRVVAYAREEF 77 (254)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHTTGGGEE-EEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCcCCHHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHhCCceE-EEEcccCCHHHHHHHHHHHHHHc
Confidence 57999999999999999999999 69999999999865321 1235678 899999999988877765421
Q ss_pred -ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 82 -EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 82 -~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
.+|++||+|+... .+|...+++|+.++..+.+++.+.+... +-.+++++||..
T Consensus 78 g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~-~~G~II~isS~~ 140 (254)
T d1hdca_ 78 GSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDA-GGGSIVNISSAA 140 (254)
T ss_dssp SCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGG
T ss_pred CCccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhc-CCCeecccccch
Confidence 3899999997643 1466778999998888777665432101 236788888753
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=99.53 E-value=2.5e-14 Score=113.15 Aligned_cols=120 Identities=17% Similarity=0.003 Sum_probs=90.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----CCCCCceeEEEeeCCCHHHHHHHHHhccc-
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----FPTALVDRYITFDALDPTDTALKLSLISQ- 81 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~- 81 (211)
.+|++|||||++.||+++++.|+ ++|++|++++|++.... ....++. .+.+|++|++++.+.++.+..
T Consensus 4 ~gKvalVTGas~GIG~aia~~la-----~~Ga~V~~~~~~~~~~~~~~~~~~g~~~~-~~~~Dvs~~~~v~~~~~~~~~~ 77 (247)
T d2ew8a1 4 KDKLAVITGGANGIGRAIAERFA-----VEGADIAIADLVPAPEAEAAIRNLGRRVL-TVKCDVSQPGDVEAFGKQVIST 77 (247)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESSCCHHHHHHHHHTTCCEE-EEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEECCchHHHHHHHHHcCCcEE-EEEeeCCCHHHHHHHHHHHHHH
Confidence 47999999999999999999999 79999999999765311 1235678 899999999988777655432
Q ss_pred --ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 82 --EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 82 --~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
.+|++||+|+... .+|+..+++|+.++..+.+++.+.+... +-.+++.+||.
T Consensus 78 ~G~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~G~Iv~isS~ 140 (247)
T d2ew8a1 78 FGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRN-GWGRIINLTST 140 (247)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCG
T ss_pred cCCCCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhc-CCCCccccccc
Confidence 3899999998743 2566788999998888777665443111 23577887774
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=99.53 E-value=9.5e-15 Score=116.34 Aligned_cols=122 Identities=13% Similarity=-0.015 Sum_probs=89.9
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC-C--------CCCCCceeEEEeeCCCHHHHHHHHH
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-W--------FPTALVDRYITFDALDPTDTALKLS 77 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~-~--------~~~~~~~~~i~~Dl~d~~~~~~~~~ 77 (211)
..+|++|||||++.||++++++|+ ++|++|++++|+.... . ....++. ++.+|++|++++.+.++
T Consensus 2 L~gK~alITGas~GIG~aiA~~la-----~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~-~~~~Dv~~~~~v~~~~~ 75 (260)
T d1x1ta1 2 LKGKVAVVTGSTSGIGLGIATALA-----AQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVL-YDGADLSKGEAVRGLVD 75 (260)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHH-----HTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEE-EECCCTTSHHHHHHHHH
T ss_pred CCcCEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEE-EEECCCCCHHHHHHHHH
Confidence 457999999999999999999999 7999999999975321 0 0134677 88999999998888776
Q ss_pred hccc---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 78 LISQ---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 78 ~~~~---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
.+.. .+|.+||+|+... .+|...+++|+.++..+.+++...+... +-.+++.+||..
T Consensus 76 ~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~-~~G~Iv~isS~~ 144 (260)
T d1x1ta1 76 NAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQ-GFGRIINIASAH 144 (260)
T ss_dssp HHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGG
T ss_pred HHHHHhCCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhc-CCceEeeccccc
Confidence 5432 3899999998642 1466778999988777766655443101 235788887743
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.52 E-value=1.2e-14 Score=114.89 Aligned_cols=121 Identities=14% Similarity=0.013 Sum_probs=90.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC----CCCCCceeEEEeeCCCHHHHHHHHHhccc--
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW----FPTALVDRYITFDALDPTDTALKLSLISQ-- 81 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~----~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~-- 81 (211)
.+|++|||||++.||++++++|+ ++|++|++++|++++.. .....+. ++.+|++|++++.+.++.+..
T Consensus 5 ~gK~alITGas~GIG~aia~~la-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~v~~~~~~~~~~~ 78 (244)
T d1nffa_ 5 TGKVALVSGGARGMGASHVRAMV-----AEGAKVVFGDILDEEGKAMAAELADAAR-YVHLDVTQPAQWKAAVDTAVTAF 78 (244)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHTGGGEE-EEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHhhCcce-EEEeecCCHHHHHHHHHHHHHHh
Confidence 46999999999999999999999 79999999999865321 1135677 899999999988777765532
Q ss_pred -ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 82 -EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 82 -~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
.+|.++|+|+... .+|++.+++|+.++..+.+.+...+... +-.+++++||..
T Consensus 79 g~idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~G~Ii~isS~~ 141 (244)
T d1nffa_ 79 GGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEA-GRGSIINISSIE 141 (244)
T ss_dssp SCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGG
T ss_pred CCCeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhc-CcceEEeccccc
Confidence 3899999998643 2567788999998888777654432111 235788887753
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.52 E-value=5.7e-14 Score=111.42 Aligned_cols=121 Identities=17% Similarity=0.029 Sum_probs=90.6
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC---------CCCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG---------WFPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~---------~~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
+|++|||||++.||++++++|+ ++|++|++++|+.++. .....++. .+.+|++|++++++.++.+
T Consensus 3 GKvalITGas~GIG~aia~~la-----~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~-~~~~Dv~~~~~v~~~~~~~ 76 (254)
T d2gdza1 3 GKVALVTGAAQGIGRAFAEALL-----LKGAKVALVDWNLEAGVQCKAALHEQFEPQKTL-FIQCDVADQQQLRDTFRKV 76 (254)
T ss_dssp TCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEE-EEECCTTSHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEE-EEEeecCCHHHHHHHHHHH
Confidence 6999999999999999999999 7999999999986431 11234677 8899999999888777655
Q ss_pred cc---ccceEEeecccCC-chhHHHHhhcHHHHHHHHHHHHhcCCC--CCCceEEEEeecCe
Q 028258 80 SQ---EITNLFWVPLQVQ-ESEEVNIFKNSTMLKNVLSVLVSSNSG--RSRLRHVALLTGTK 135 (211)
Q Consensus 80 ~~---~~~~v~~~a~~~~-~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~~~~~~~~s~~~ 135 (211)
.. .+|++||+|+... .+|++.+++|+.++.++...+...+.. ...-.+|+.+||..
T Consensus 77 ~~~~G~iDilVnnAg~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~ 138 (254)
T d2gdza1 77 VDHFGRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLA 138 (254)
T ss_dssp HHHHSCCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGG
T ss_pred HHHcCCcCeecccccccccccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHh
Confidence 32 3899999998865 478888999998777666665544310 11125678887743
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.52 E-value=1.1e-14 Score=115.14 Aligned_cols=121 Identities=12% Similarity=-0.052 Sum_probs=91.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHhcc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSLIS 80 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~ 80 (211)
.+|+++|||||+.||++++++|+ ++|++|++++|++++.. ....++. .+.||++|++++.+.++.+.
T Consensus 6 ~Gkv~lITGas~GIG~~ia~~la-----~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~-~~~~Dvs~~~~v~~~~~~i~ 79 (244)
T d1yb1a_ 6 TGEIVLITGAGHGIGRLTAYEFA-----KLKSKLVLWDINKHGLEETAAKCKGLGAKVH-TFVVDCSNREDIYSSAKKVK 79 (244)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHHHTTCCEE-EEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHHHhcCCcEE-EEEeeCCCHHHHHHHHHHHH
Confidence 47999999999999999999999 79999999999875411 1235788 89999999998877776442
Q ss_pred c---ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 81 Q---EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 81 ~---~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
. .+|.++|+|+.... .+.+.+++|+.++.++.+++...+... +-.+++.+||..
T Consensus 80 ~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~~G~Iv~isS~~ 145 (244)
T d1yb1a_ 80 AEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKN-NHGHIVTVASAA 145 (244)
T ss_dssp HHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEECCCC
T ss_pred HHcCCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhc-CCceEEEeecch
Confidence 1 38999999987432 355678999998888777665543111 336788887754
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=99.52 E-value=3.1e-14 Score=112.82 Aligned_cols=120 Identities=13% Similarity=-0.024 Sum_probs=90.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC--------CCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW--------FPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~--------~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
.+|++|||||++.||++++++|+ ++|++|++++|+.++.. ....++. .+.+|++|++++.+.++.+
T Consensus 4 ~gK~~lITGas~GIG~aia~~la-----~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~-~~~~Dv~~~~~v~~~~~~~ 77 (251)
T d1vl8a_ 4 RGRVALVTGGSRGLGFGIAQGLA-----EAGCSVVVASRNLEEASEAAQKLTEKYGVETM-AFRCDVSNYEEVKKLLEAV 77 (251)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHHHHHCCCEE-EEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHHHHHhCCcEE-EEEccCCCHHHHHHHHHHH
Confidence 47999999999999999999999 79999999999865311 0124567 8899999999887777655
Q ss_pred cc---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 80 SQ---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 80 ~~---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
.. .+|++||+|+... .+|+..+++|+.++..+.+++...+... +-.+++.++|.
T Consensus 78 ~~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~G~Ii~i~S~ 143 (251)
T d1vl8a_ 78 KEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRES-DNPSIINIGSL 143 (251)
T ss_dssp HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTC-SSCEEEEECCG
T ss_pred HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhccccc-ccccccccccc
Confidence 32 3899999998632 2566778999999888888776654212 23467777653
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=99.52 E-value=1.4e-14 Score=115.44 Aligned_cols=108 Identities=12% Similarity=-0.033 Sum_probs=83.4
Q ss_pred ccCC-CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC--------CCCCCceeEEEeeCCCHHHHHH
Q 028258 4 QDQN-PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW--------FPTALVDRYITFDALDPTDTAL 74 (211)
Q Consensus 4 ~~~~-~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~--------~~~~~~~~~i~~Dl~d~~~~~~ 74 (211)
|.++ ++|++|||||++.||++++++|+ +.|++|++++|+..+.. ....++. .+.+|++|++++.+
T Consensus 3 ~~m~l~gK~alITGas~GIG~aia~~la-----~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~-~~~~Dv~~~~~v~~ 76 (260)
T d1h5qa_ 3 FTISFVNKTIIVTGGNRGIGLAFTRAVA-----AAGANVAVIYRSAADAVEVTEKVGKEFGVKTK-AYQCDVSNTDIVTK 76 (260)
T ss_dssp EEECCTTEEEEEETTTSHHHHHHHHHHH-----HTTEEEEEEESSCTTHHHHHHHHHHHHTCCEE-EEECCTTCHHHHHH
T ss_pred CcccCCCCEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHHHHHhCCceE-EEEccCCCHHHHHH
Confidence 4433 57999999999999999999999 79999999999876521 0134677 89999999998877
Q ss_pred HHHhccc---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHh
Q 028258 75 KLSLISQ---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVS 117 (211)
Q Consensus 75 ~~~~~~~---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~ 117 (211)
.++.+.. .+|++||+|+... .+|++.+++|+.++.++.+++..
T Consensus 77 ~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~ 131 (260)
T d1h5qa_ 77 TIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAK 131 (260)
T ss_dssp HHHHHHHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhcc
Confidence 7765432 3899999997632 14667789999887777665543
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=99.52 E-value=1.1e-14 Score=115.68 Aligned_cols=122 Identities=16% Similarity=0.015 Sum_probs=90.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC----CCCCCceeEEEeeCCCHHHHHHHHHhccc--
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW----FPTALVDRYITFDALDPTDTALKLSLISQ-- 81 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~----~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~-- 81 (211)
.+|++|||||+++||++++++|+ ++|++|++++|+.++.. ....++. .+.+|++|++++.+.++.+..
T Consensus 4 ~gK~alVTGas~GIG~aia~~la-----~~Ga~V~~~~r~~~~l~~~~~~~~~~~~-~~~~Dvt~~~~v~~~~~~~~~~~ 77 (256)
T d1k2wa_ 4 DGKTALITGSARGIGRAFAEAYV-----REGARVAIADINLEAARATAAEIGPAAC-AIALDVTDQASIDRCVAELLDRW 77 (256)
T ss_dssp TTEEEEEETCSSHHHHHHHHHHH-----HTTEEEEEEESCHHHHHHHHHHHCTTEE-EEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHhCCceE-EEEeeCCCHHHHHHHHHHHHHHh
Confidence 46999999999999999999999 79999999999865321 0135678 899999999988877765432
Q ss_pred -ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 82 -EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 82 -~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
.+|.+||+|+... .+|+..+++|+.++..+.+++...+....+-.+++++||..
T Consensus 78 g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~ 141 (256)
T d1k2wa_ 78 GSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQA 141 (256)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGG
T ss_pred CCccEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchh
Confidence 3899999998643 24667789999988887775443210011235788887743
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=99.51 E-value=3e-14 Score=112.94 Aligned_cols=124 Identities=14% Similarity=-0.012 Sum_probs=91.7
Q ss_pred CCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 6 QNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 6 ~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
...+|++|||||++.||++++++|+ +.|++|++++|+++... ....++. .+.+|++|++++.+.++.
T Consensus 7 ~lenKvalITGas~GIG~a~a~~la-----~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~-~~~~Dvt~~~~v~~~~~~ 80 (251)
T d2c07a1 7 CGENKVALVTGAGRGIGREIAKMLA-----KSVSHVICISRTQKSCDSVVDEIKSFGYESS-GYAGDVSKKEEISEVINK 80 (251)
T ss_dssp CCSSCEEEEESTTSHHHHHHHHHHT-----TTSSEEEEEESSHHHHHHHHHHHHTTTCCEE-EEECCTTCHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHH-----HcCCEEEEEECCHHHHHHHHHHHHhcCCcEE-EEEccCCCHHHHHHHHHH
Confidence 3357999999999999999999999 79999999999765310 1235678 899999999988877765
Q ss_pred ccc---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCee
Q 028258 79 ISQ---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKH 136 (211)
Q Consensus 79 ~~~---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~ 136 (211)
+.. .+|++||+|+... .+|...+++|+.++..+.+++...+... +-.+++.+||...
T Consensus 81 ~~~~~g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~G~IVnisS~~~ 149 (251)
T d2c07a1 81 ILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINN-RYGRIINISSIVG 149 (251)
T ss_dssp HHHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHH-TCEEEEEECCTHH
T ss_pred HHHhcCCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccC-CCeEEEEECCHHh
Confidence 421 3899999987632 2566778999988877777655432101 2367888887543
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=99.51 E-value=2.2e-14 Score=114.33 Aligned_cols=121 Identities=12% Similarity=-0.113 Sum_probs=88.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC-C-------CCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-W-------FPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~-~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
.+|++|||||++.||++++++|+ ++|++|++++|+.+.. . ....++. .+.+|++|++++.+.++.+
T Consensus 6 ~gK~alITGas~GIG~aia~~la-----~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~-~~~~Dvt~~~~v~~~~~~~ 79 (261)
T d1geea_ 6 EGKVVVITGSSTGLGKSMAIRFA-----TEKAKVVVNYRSKEDEANSVLEEIKKVGGEAI-AVKGDVTVESDVINLVQSA 79 (261)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHH-----HTTCEEEEEESSCHHHHHHHHHHHHHTTCEEE-EEECCTTSHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEE-EEEccCCCHHHHHHHHHHH
Confidence 57999999999999999999999 7999999999976421 0 1234677 8899999999887777654
Q ss_pred cc---ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 80 SQ---EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 80 ~~---~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
.. .+|++||+|+.... +|...+++|+.++..+.+++...+.....-..|+.+||.
T Consensus 80 ~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~ 146 (261)
T d1geea_ 80 IKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSV 146 (261)
T ss_dssp HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCG
T ss_pred HHHhCCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccc
Confidence 21 38999999987432 466778999988877777665443111122456777664
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=99.51 E-value=7e-15 Score=116.08 Aligned_cols=121 Identities=18% Similarity=0.135 Sum_probs=90.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC----CCCCCceeEEEeeCCCHHHHHHHHHhccc--
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW----FPTALVDRYITFDALDPTDTALKLSLISQ-- 81 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~----~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~-- 81 (211)
.+|+++||||++.||+++++.|+ ++|++|++++|+++... ....+.. .+.+|++|++++.+.++.+..
T Consensus 3 ~gK~alITGas~GIG~a~a~~l~-----~~G~~Vv~~~r~~~~l~~~~~~~~~~~~-~~~~Dv~~~~~v~~~~~~~~~~~ 76 (243)
T d1q7ba_ 3 EGKIALVTGASRGIGRAIAETLA-----ARGAKVIGTATSENGAQAISDYLGANGK-GLMLNVTDPASIESVLEKIRAEF 76 (243)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHH-----HTTCEEEEEESSHHHHHHHHHHHGGGEE-EEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCCCCHHHHHHHHHHH-----HcCCEEEEEeCCHHHHHHHHHHhCCCCc-EEEEEecCHHHhhhhhhhhhccc
Confidence 46999999999999999999999 79999999999865321 0135677 889999999988777765432
Q ss_pred -ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 82 -EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 82 -~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
.+|.+||+|+... .+|...+++|+.++..+.+++.+.+... +-.+++++||..
T Consensus 77 g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~G~II~isS~~ 139 (243)
T d1q7ba_ 77 GEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKK-RHGRIITIGSVV 139 (243)
T ss_dssp CSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCHH
T ss_pred CCcceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHc-CCCEeeeecchh
Confidence 3899999997643 1466778999998888777775443111 236788888754
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=99.51 E-value=4.6e-14 Score=112.13 Aligned_cols=120 Identities=18% Similarity=0.066 Sum_probs=89.6
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHhccc
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSLISQ 81 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~ 81 (211)
+|++|||||++.||++++++|+ ++|++|++++|+++... ....++. .+.+|++|++++++.++.+..
T Consensus 2 gKValITGas~GIG~aia~~la-----~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~-~~~~Dvs~~~~v~~~~~~~~~ 75 (257)
T d2rhca1 2 SEVALVTGATSGIGLEIARRLG-----KEGLRVFVCARGEEGLRTTLKELREAGVEAD-GRTCDVRSVPEIEALVAAVVE 75 (257)
T ss_dssp CCEEEEESCSSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHHHTTCCEE-EEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHHHhcCCcEE-EEEeecCCHHHHHHHHHHHHH
Confidence 5899999999999999999999 79999999999865311 1235677 899999999988777765432
Q ss_pred ---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCC-CCCCceEEEEeecC
Q 028258 82 ---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNS-GRSRLRHVALLTGT 134 (211)
Q Consensus 82 ---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~~~~~~s~~ 134 (211)
.+|.+||+|+... .+|+..+++|+.++.++.+++.+.+. ...+-.+++.++|.
T Consensus 76 ~~g~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~ 141 (257)
T d2rhca1 76 RYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIAST 141 (257)
T ss_dssp HTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCG
T ss_pred HhCCCCEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCccccccccc
Confidence 3899999998633 15667889999999999887764310 00123567777664
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.51 E-value=1.1e-14 Score=115.51 Aligned_cols=120 Identities=11% Similarity=-0.018 Sum_probs=90.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC---CCCCCceeEEEeeCCCHHHHHHHHHhccc---
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW---FPTALVDRYITFDALDPTDTALKLSLISQ--- 81 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~---~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~--- 81 (211)
.+|++|||||++.||+++++.|+ ++|++|++++|+++... ...++.. ++.+|++|++++++.++.+..
T Consensus 5 ~GK~alITGas~GIG~aia~~la-----~~Ga~V~i~~r~~~~~~~~~~~~~~~~-~~~~Dvs~~~~v~~~~~~~~~~~g 78 (250)
T d1ydea1 5 AGKVVVVTGGGRGIGAGIVRAFV-----NSGARVVICDKDESGGRALEQELPGAV-FILCDVTQEDDVKTLVSETIRRFG 78 (250)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHCTTEE-EEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHhcCCCe-EEEccCCCHHHHHHHHHHHHHhcC
Confidence 47999999999999999999999 79999999999865321 1235678 899999999988887765532
Q ss_pred ccceEEeecccCC----------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 82 EITNLFWVPLQVQ----------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 82 ~~~~v~~~a~~~~----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
.+|++||+|+... .+|+..+++|+.++.++.+++.+.+.+. -.+++.+||..
T Consensus 79 ~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~--~G~Ii~isS~~ 140 (250)
T d1ydea1 79 RLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS--QGNVINISSLV 140 (250)
T ss_dssp CCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEECCHH
T ss_pred CCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhC--CCCCccccccc
Confidence 3899999997521 1356678999998888888776554111 14677777643
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=99.50 E-value=1e-13 Score=110.70 Aligned_cols=122 Identities=14% Similarity=0.005 Sum_probs=89.1
Q ss_pred CCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC------CCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 6 QNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW------FPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 6 ~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
...+|++|||||++.||++++++|+ ++|++|++++|+..+.. .....+. ++.+|++|++++.+.++.+
T Consensus 3 rL~gKvalITGas~GIG~aia~~la-----~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~-~~~~Dv~~~~~v~~~~~~~ 76 (268)
T d2bgka1 3 RLQDKVAIITGGAGGIGETTAKLFV-----RYGAKVVIADIADDHGQKVCNNIGSPDVIS-FVHCDVTKDEDVRNLVDTT 76 (268)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHCCTTTEE-EEECCTTCHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHhcCCCceE-EEEccCCCHHHHHHHHHHH
Confidence 3457999999999999999999999 79999999999765311 1235577 8999999999887777654
Q ss_pred cc---ccceEEeecccCC-----------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 80 SQ---EITNLFWVPLQVQ-----------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 80 ~~---~~~~v~~~a~~~~-----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
.. .+|++||+|+... .+|+..+++|+.++..+.+++.+.+... +-.+++.+||.
T Consensus 77 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~-~~g~ii~iss~ 144 (268)
T d2bgka1 77 IAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPA-KKGSIVFTASI 144 (268)
T ss_dssp HHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGG-TCEEEEEECCG
T ss_pred HHHcCCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhc-CCCCccccccc
Confidence 21 3899999997521 1355677999998888877765543111 23466666654
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=99.49 E-value=1e-13 Score=110.00 Aligned_cols=123 Identities=15% Similarity=0.073 Sum_probs=90.5
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC--------CCCCCceeEEEeeCC-CHHHHHHHHH
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW--------FPTALVDRYITFDAL-DPTDTALKLS 77 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~--------~~~~~~~~~i~~Dl~-d~~~~~~~~~ 77 (211)
..+|+||||||+++||.+++++|+ ++|++|+++.|+.+... ....++. ++.+|++ +.+++.+.++
T Consensus 3 l~gK~vlITGgs~GIG~~~A~~la-----~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~~ 76 (254)
T d1sbya1 3 LTNKNVIFVAALGGIGLDTSRELV-----KRNLKNFVILDRVENPTALAELKAINPKVNIT-FHTYDVTVPVAESKKLLK 76 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHH-----HTCCSEEEEEESSCCHHHHHHHHHHCTTSEEE-EEECCTTSCHHHHHHHHH
T ss_pred CCCCEEEEecCCCHHHHHHHHHHH-----HCCCEEEEEECCcccHHHHHHHHhhCCCCCEE-EEEeecCCCHHHHHHHHH
Confidence 357999999999999999999999 79999999988765421 1235677 8899998 5555655554
Q ss_pred hccc---ccceEEeecccCC-chhHHHHhhcHHHHHHHHHHHHhcCCC--CCCceEEEEeecCe
Q 028258 78 LISQ---EITNLFWVPLQVQ-ESEEVNIFKNSTMLKNVLSVLVSSNSG--RSRLRHVALLTGTK 135 (211)
Q Consensus 78 ~~~~---~~~~v~~~a~~~~-~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~~~~~~~~s~~~ 135 (211)
.+.. .+|++|++|+... .+|+..+++|+.++.++..++...+.. .....+++.+||..
T Consensus 77 ~~~~~~g~iDilvnnAG~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~ 140 (254)
T d1sbya1 77 KIFDQLKTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVT 140 (254)
T ss_dssp HHHHHHSCCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGG
T ss_pred HHHHHcCCCCEEEeCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechh
Confidence 3321 3899999998755 478889999999888888777655411 11246788887743
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.49 E-value=1.5e-13 Score=108.88 Aligned_cols=156 Identities=15% Similarity=0.074 Sum_probs=105.8
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCc-EEEEEeCCCCCCC----------CCCCCceeEEEeeCCCHHHHHHHHH
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRPPPGW----------FPTALVDRYITFDALDPTDTALKLS 77 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~-~V~~~~R~~~~~~----------~~~~~~~~~i~~Dl~d~~~~~~~~~ 77 (211)
.+++|||||+|+||++++++|+ ++|+ +|+++.|+..... .....+. ++.+|++|++++.+.++
T Consensus 9 ~gt~lVTGgs~GIG~a~a~~la-----~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~-~~~~Dv~d~~~~~~~~~ 82 (259)
T d2fr1a1 9 TGTVLVTGGTGGVGGQIARWLA-----RRGAPHLLLVSRSGPDADGAGELVAELEALGARTT-VAACDVTDRESVRELLG 82 (259)
T ss_dssp CSEEEEETTTSHHHHHHHHHHH-----HHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEE-EEECCTTCHHHHHHHHH
T ss_pred cCEEEEECCCcHHHHHHHHHHH-----HCCCCEEEEEeCCccCHHHHHHHHHHHHhcccccc-ccccccchHHHHHHhhc
Confidence 4689999999999999999999 6888 4788888643211 0134678 89999999999988887
Q ss_pred hccc--ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccc
Q 028258 78 LISQ--EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSL 146 (211)
Q Consensus 78 ~~~~--~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~ 146 (211)
.+.. .++.|+|+++.... .+...+.+|+.++.++.+++... ...+|+++||.....+.
T Consensus 83 ~i~~~~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~-----~~~~iv~~SS~a~~~g~------ 151 (259)
T d2fr1a1 83 GIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTREL-----DLTAFVLFSSFASAFGA------ 151 (259)
T ss_dssp TSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTS-----CCSEEEEEEEHHHHTCC------
T ss_pred cccccccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhcc-----CCceEeeecchhhccCC------
Confidence 7643 37889999876432 23445688999999988877665 45677877775432110
Q ss_pred cCCCCCCCCCCcCCCCCCCCCCcchhHHHHH----hh-cCCCceEEEecCCceEecCC
Q 028258 147 AGQLMPYEVPFKEDSSRLPFPNFYYELEDVS----AS-YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 147 ~g~~~~~~~~~~e~~~~~~~~~~~~~~e~~l----~~-~~~~~~~~i~Rp~~i~G~~~ 199 (211)
+....|.+.+..+ .+ +..|++++.+.|+.+.+.+.
T Consensus 152 ------------------~~~~~YaAaka~l~~la~~~~~~Gi~v~~I~pg~~~~~g~ 191 (259)
T d2fr1a1 152 ------------------PGLGGYAPGNAYLDGLAQQRRSDGLPATAVAWGTWAGSGM 191 (259)
T ss_dssp ------------------TTCTTTHHHHHHHHHHHHHHHHTTCCCEEEEECCBC----
T ss_pred ------------------cccHHHHHHHHhHHHHHHHHHhCCCCEEECCCCcccCCcc
Confidence 0011132222111 12 45799999999998876644
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=99.49 E-value=2.9e-14 Score=112.28 Aligned_cols=120 Identities=19% Similarity=0.087 Sum_probs=87.6
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcE-------EEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHH
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWK-------VYGAARRPPPGW-------FPTALVDRYITFDALDPTDTAL 74 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~-------V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~ 74 (211)
|+.||||||+++||++++++|+ ++|++ |+..+|+..... .....+. .+.+|++|++++.+
T Consensus 1 K~VvlITGas~GIG~aia~~la-----~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~-~~~~Dvt~~~~v~~ 74 (240)
T d2bd0a1 1 KHILLITGAGKGIGRAIALEFA-----RAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTD-TITADISDMADVRR 74 (240)
T ss_dssp CEEEEEETTTSHHHHHHHHHHH-----HHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEE-EEECCTTSHHHHHH
T ss_pred CCEEEEccCCCHHHHHHHHHHH-----HhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEE-EEEecCCCHHHHHH
Confidence 4568999999999999999999 68876 888888765311 1235667 88999999998877
Q ss_pred HHHhccc---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 75 KLSLISQ---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 75 ~~~~~~~---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
.++.+.. .+|.+||+|+... .+|+..+++|+.++..+.+++...|... +-.+++.+||..
T Consensus 75 ~~~~~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~-~~G~Ii~isS~~ 146 (240)
T d2bd0a1 75 LTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQ-HSGHIFFITSVA 146 (240)
T ss_dssp HHHHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGG
T ss_pred HHHHHHHHcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhc-CCCceEEEechh
Confidence 7665432 3899999998643 2566788999998888777766543111 235778777643
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=99.48 E-value=6.6e-14 Score=111.39 Aligned_cols=120 Identities=13% Similarity=0.036 Sum_probs=89.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHhc-
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSLI- 79 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~- 79 (211)
.+|++|||||++.||++++++|+ ++|++|++++|++++.. .....+. .+.+|++|++++.+.++.+
T Consensus 7 ~GK~alITGas~GIG~aia~~la-----~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~-~~~~Dv~~~~~v~~~~~~~~ 80 (259)
T d2ae2a_ 7 EGCTALVTGGSRGIGYGIVEELA-----SLGASVYTCSRNQKELNDCLTQWRSKGFKVE-ASVCDLSSRSERQELMNTVA 80 (259)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHHHTTCEEE-EEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHHHhcCCCce-EEEeeCCCHHHHHHHHHHHH
Confidence 57999999999999999999999 69999999999765311 1235667 8899999999887776543
Q ss_pred ---ccccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 80 ---SQEITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 80 ---~~~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
...+|++||+|+... .+|+..+++|+.++..+.+++...+... +-.+++++||.
T Consensus 81 ~~~~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~G~Ii~isS~ 146 (259)
T d2ae2a_ 81 NHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKAS-ERGNVVFISSV 146 (259)
T ss_dssp HHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-SSEEEEEECCG
T ss_pred HHhCCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhh-ccccccccccc
Confidence 213899999998633 1466788999998887777665432101 23578888774
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=99.48 E-value=5.1e-14 Score=112.08 Aligned_cols=121 Identities=13% Similarity=-0.021 Sum_probs=89.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHhcc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSLIS 80 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~ 80 (211)
.+|++|||||++.||+++++.|+ ++|++|++++|+++... ....++. .+.+|++|++++.+.++.+.
T Consensus 4 ~gK~alITGas~GIG~aia~~la-----~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~-~~~~Dv~~~~~v~~~~~~~~ 77 (260)
T d1zema1 4 NGKVCLVTGAGGNIGLATALRLA-----EEGTAIALLDMNREALEKAEASVREKGVEAR-SYVCDVTSEEAVIGTVDSVV 77 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHHTTTSCEE-EEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHHHhcCCcEE-EEEccCCCHHHHHHHHHHHH
Confidence 46999999999999999999999 79999999999765311 1235678 89999999988877776542
Q ss_pred c---ccceEEeecccCC----------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 81 Q---EITNLFWVPLQVQ----------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 81 ~---~~~~v~~~a~~~~----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
. .+|++||+|+... .+|...+++|+.++..+.+++.+.+... +-.+++++||..
T Consensus 78 ~~~g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~-~~G~II~isS~~ 144 (260)
T d1zema1 78 RDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQ-NYGRIVNTASMA 144 (260)
T ss_dssp HHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCHH
T ss_pred HHhCCCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhh-cCCCCCeeechh
Confidence 1 3899999987532 1456678999998888777665432101 235788887743
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=99.48 E-value=7.6e-14 Score=109.88 Aligned_cols=106 Identities=11% Similarity=-0.064 Sum_probs=85.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC----CCCCCceeEEEeeCCCHHHHHHHHHhccc--
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW----FPTALVDRYITFDALDPTDTALKLSLISQ-- 81 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~----~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~-- 81 (211)
.+|++|||||++.||+++++.|+ ++|++|+++.|+..+.. ....++. ++.+|+++++++.+.++.+..
T Consensus 4 ~gK~alItGas~GIG~aia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~Dls~~~~i~~~~~~i~~~~ 77 (241)
T d2a4ka1 4 SGKTILVTGAASGIGRAALDLFA-----REGASLVAVDREERLLAEAVAALEAEAI-AVVADVSDPKAVEAVFAEALEEF 77 (241)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHTCCSSEE-EEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHcCCceE-EEEecCCCHHHHHHHHHHHHHHh
Confidence 46999999999999999999999 79999999999865411 1245677 899999999998887766532
Q ss_pred -ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcC
Q 028258 82 -EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSN 119 (211)
Q Consensus 82 -~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~ 119 (211)
.+|++||+|+.... .|.+.+++|+.++..+.+++...+
T Consensus 78 g~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~ 125 (241)
T d2a4ka1 78 GRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVL 125 (241)
T ss_dssp SCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCccEeccccccccccchhhhhcccccccccccccccccccccccccc
Confidence 38999999876431 466778999999999888887763
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=99.48 E-value=7.2e-14 Score=111.12 Aligned_cols=120 Identities=15% Similarity=-0.037 Sum_probs=88.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC---------CCCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW---------FPTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~---------~~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
.+|++|||||++.||+++++.|+ ++|++|++++|++++.. ....++. .+.+|++|++++.+.++.
T Consensus 3 ~gK~alITGas~GIG~aia~~la-----~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~-~~~~Dvt~~~~v~~~~~~ 76 (258)
T d1iy8a_ 3 TDRVVLITGGGSGLGRATAVRLA-----AEGAKLSLVDVSSEGLEASKAAVLETAPDAEVL-TTVADVSDEAQVEAYVTA 76 (258)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEE-EEECCTTSHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEE-EEeccCCCHHHHHHHHHH
Confidence 46899999999999999999999 79999999999865310 1234667 889999999988777765
Q ss_pred ccc---ccceEEeecccCC----------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 79 ISQ---EITNLFWVPLQVQ----------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 79 ~~~---~~~~v~~~a~~~~----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
+.. .+|++||+|+... .+|+..+++|+.++..+.+++...+... +-.+++.+||.
T Consensus 77 ~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~-~~G~Ii~isS~ 144 (258)
T d1iy8a_ 77 TTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQ-GSGMVVNTASV 144 (258)
T ss_dssp HHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEECCG
T ss_pred HHHHhCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhh-cCCCCcccccH
Confidence 422 3899999997531 1466678999999888887664432101 23567887774
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.47 E-value=9.4e-14 Score=110.48 Aligned_cols=121 Identities=13% Similarity=0.008 Sum_probs=87.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHhcc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSLIS 80 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~ 80 (211)
++|++|||||++.||++++++|+ +.|++|++++|++.+.. ....++. .+.+|++|++++.+.++.+.
T Consensus 7 kgK~alVTGas~GIG~aiA~~la-----~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~-~~~~Dv~~~~~v~~~~~~~~ 80 (259)
T d1xq1a_ 7 KAKTVLVTGGTKGIGHAIVEEFA-----GFGAVIHTCARNEYELNECLSKWQKKGFQVT-GSVCDASLRPEREKLMQTVS 80 (259)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHHHTTCCEE-EEECCTTSHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHHHhcCCceE-EEeccCCCHHHHHHHHHHHH
Confidence 57999999999999999999999 79999999999865311 1235678 89999999988877765442
Q ss_pred ----cccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 81 ----QEITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 81 ----~~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
..+|+++|+|+... .+|+..+++|+.++..+.+++...+... +-.+++++||..
T Consensus 81 ~~~~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~-~~G~Iv~isS~~ 147 (259)
T d1xq1a_ 81 SMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKAS-GCGNIIFMSSIA 147 (259)
T ss_dssp HHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-SSCEEEEEC---
T ss_pred HHhCCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhccccc-cccccccccccc
Confidence 23899999998632 2567788999998888777665443101 235778877743
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.46 E-value=5.6e-13 Score=105.10 Aligned_cols=105 Identities=16% Similarity=0.111 Sum_probs=79.6
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC------CCCCCceeEEEeeCCCHHHHHHHHHhcc---
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW------FPTALVDRYITFDALDPTDTALKLSLIS--- 80 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~--- 80 (211)
|+|||||||++||++++++|++.. ++|++|+++.|++++.. ....++. ++.+|++|+++++++++.++
T Consensus 3 KtilITGas~GIG~a~a~~l~~~a--~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~Dvs~~~~v~~~~~~i~~~~ 79 (248)
T d1snya_ 3 NSILITGCNRGLGLGLVKALLNLP--QPPQHLFTTCRNREQAKELEDLAKNHSNIH-ILEIDLRNFDAYDKLVADIEGVT 79 (248)
T ss_dssp SEEEESCCSSHHHHHHHHHHHTSS--SCCSEEEEEESCTTSCHHHHHHHHHCTTEE-EEECCTTCGGGHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHHH--hCCCEEEEEECCHHHHHHHHHHHhcCCcEE-EEEEEeccHHHHHHHHhhhHHHh
Confidence 789999999999999999996210 47999999999877532 1236788 99999999988877766431
Q ss_pred --cccceEEeecccCCc----------hhHHHHhhcHHHHHHHHHHHHh
Q 028258 81 --QEITNLFWVPLQVQE----------SEEVNIFKNSTMLKNVLSVLVS 117 (211)
Q Consensus 81 --~~~~~v~~~a~~~~~----------~~~~~~~~n~~~~~~l~~~~~~ 117 (211)
..+|.+|++|+.... .+...+++|+.++..+.+++..
T Consensus 80 ~~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p 128 (248)
T d1snya_ 80 KDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLP 128 (248)
T ss_dssp GGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred hcCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHH
Confidence 138999999875221 2455778999988777776654
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.45 E-value=1.5e-13 Score=109.23 Aligned_cols=126 Identities=17% Similarity=0.021 Sum_probs=91.1
Q ss_pred ccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC---------CCCCCceeEEEeeCCCHHHHHH
Q 028258 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW---------FPTALVDRYITFDALDPTDTAL 74 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~---------~~~~~~~~~i~~Dl~d~~~~~~ 74 (211)
|..-+.|++|||||++.||+++++.|+ ++|++|++++|++.+.. .....+. ++.+|++|++++.+
T Consensus 5 M~~lk~Kv~lITGas~GIG~aiA~~la-----~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~-~~~~Dls~~~~v~~ 78 (257)
T d1xg5a_ 5 MERWRDRLALVTGASGGIGAAVARALV-----QQGLKVVGCARTVGNIEELAAECKSAGYPGTLI-PYRCDLSNEEDILS 78 (257)
T ss_dssp CGGGTTCEEEEESTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEE-EEECCTTCHHHHHH
T ss_pred CCCCCCCEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHHHhcCCCceEE-EEEccCCCHHHHHH
Confidence 565668999999999999999999999 69999999999865311 0124677 88999999998877
Q ss_pred HHHhccc---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCC-CCCCceEEEEeecCe
Q 028258 75 KLSLISQ---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNS-GRSRLRHVALLTGTK 135 (211)
Q Consensus 75 ~~~~~~~---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~~~~~~s~~~ 135 (211)
.++.+.. .+|++||+|+... ..|...+++|+.+...+.+.+.+.+. ....-.+++++||..
T Consensus 79 ~v~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~ 152 (257)
T d1xg5a_ 79 MFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMS 152 (257)
T ss_dssp HHHHHHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGG
T ss_pred HHHHHHHhcCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechH
Confidence 7665432 3899999997642 14666788898887776665533210 022235788887754
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.45 E-value=2.6e-13 Score=109.97 Aligned_cols=105 Identities=16% Similarity=-0.047 Sum_probs=82.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC------------CCCCCCceeEEEeeCCCHHHHHHH
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG------------WFPTALVDRYITFDALDPTDTALK 75 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~------------~~~~~~~~~~i~~Dl~d~~~~~~~ 75 (211)
.+|++|||||++.||++++++|+ ++|++|++++|+.++. .....++. .+.+|++|++++.+.
T Consensus 11 ~gKvalITGas~GIG~aia~~la-----~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~-~~~~Dvs~~~~v~~~ 84 (297)
T d1yxma1 11 QGQVAIVTGGATGIGKAIVKELL-----ELGSNVVIASRKLERLKSAADELQANLPPTKQARVI-PIQCNIRNEEEVNNL 84 (297)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEE-EEECCTTCHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEE-EEeccCCCHHHHHHH
Confidence 57999999999999999999999 7999999999975421 01234677 889999999988777
Q ss_pred HHhccc---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhc
Q 028258 76 LSLISQ---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 76 ~~~~~~---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
++.+.. .+|++||+|+... .+|...+++|+.++..+.+++...
T Consensus 85 ~~~~~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~ 139 (297)
T d1yxma1 85 VKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSS 139 (297)
T ss_dssp HHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHh
Confidence 765421 3899999997632 256677899999888887776544
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=99.45 E-value=1.2e-13 Score=109.76 Aligned_cols=121 Identities=17% Similarity=0.086 Sum_probs=88.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHhcc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSLIS 80 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~ 80 (211)
.+|++|||||++.||++++++|+ ++|++|++++|++.+.. .....+. ++.+|+++++++++.++.+.
T Consensus 5 ~gK~alITGas~GIG~aia~~la-----~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~-~~~~D~s~~~~~~~~~~~~~ 78 (258)
T d1ae1a_ 5 KGTTALVTGGSKGIGYAIVEELA-----GLGARVYTCSRNEKELDECLEIWREKGLNVE-GSVCDLLSRTERDKLMQTVA 78 (258)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHHHTTCCEE-EEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHHHhcCCCce-EEEeecCCHHHHHHHHHHHH
Confidence 57999999999999999999999 79999999999864311 1235667 88999999998777654432
Q ss_pred ----cccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 81 ----QEITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 81 ----~~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
..+|+++++++.... +|...+++|+.++..+.+++...+. ..+..+++++||..
T Consensus 79 ~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~-~~~~g~ii~isS~~ 145 (258)
T d1ae1a_ 79 HVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLK-ASQNGNVIFLSSIA 145 (258)
T ss_dssp HHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHTSEEEEEECCGG
T ss_pred HHhCCCcEEEeccccccccCccccCCHHHHhhhhhhccccccccccccccccc-cccccccccccccc
Confidence 137889998876431 5667889999888777776553321 11346778877643
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=99.44 E-value=1.8e-13 Score=108.44 Aligned_cols=121 Identities=14% Similarity=0.032 Sum_probs=92.0
Q ss_pred CCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC----CCCCCceeEEEeeCCCHHHHHHHHHhccc
Q 028258 6 QNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW----FPTALVDRYITFDALDPTDTALKLSLISQ 81 (211)
Q Consensus 6 ~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~----~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~ 81 (211)
...+|++|||||++.||++++++|+ ++|++|++++|+++... ....+.. ++.+|++|++++.+.++.+..
T Consensus 3 rL~gK~alITGas~GIG~aia~~la-----~~Ga~V~~~~~~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~~~~~~~~~~~ 76 (253)
T d1hxha_ 3 RLQGKVALVTGGASGVGLEVVKLLL-----GEGAKVAFSDINEAAGQQLAAELGERSM-FVRHDVSSEADWTLVMAAVQR 76 (253)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHH-----HTTCEEEEECSCHHHHHHHHHHHCTTEE-EECCCTTCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHhCCCeE-EEEeecCCHHHHHHHHHHHHH
Confidence 3457999999999999999999999 79999999999765311 0134567 889999999888777765532
Q ss_pred ---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 82 ---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 82 ---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
.+|++||+|+... .+|+..+++|+.++..+.+++...+... -.+++++||.
T Consensus 77 ~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~--~G~Iv~isS~ 139 (253)
T d1hxha_ 77 RLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKET--GGSIINMASV 139 (253)
T ss_dssp HHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT--CEEEEEECCG
T ss_pred HhCCCCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhc--CCceecccch
Confidence 3899999998642 1466788999998888888776655322 2678888774
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=99.44 E-value=1.6e-13 Score=107.44 Aligned_cols=116 Identities=12% Similarity=0.041 Sum_probs=83.7
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccceE
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITNL 86 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v 86 (211)
.++|++|||||++.||++++++|+ ++|++|++++|+++.. ...+.+ ++.+|+++. ++..++.... +|++
T Consensus 2 LkgK~~lVTGas~GIG~aia~~l~-----~~Ga~V~~~~r~~~~l--~~~~~~-~~~~Dv~~~--~~~~~~~~g~-iD~l 70 (234)
T d1o5ia_ 2 IRDKGVLVLAASRGIGRAVADVLS-----QEGAEVTICARNEELL--KRSGHR-YVVCDLRKD--LDLLFEKVKE-VDIL 70 (234)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHH-----HTTCEEEEEESCHHHH--HHTCSE-EEECCTTTC--HHHHHHHSCC-CSEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEECCHHHH--HhcCCc-EEEcchHHH--HHHHHHHhCC-CcEE
Confidence 357999999999999999999999 7999999999986532 124556 889999874 4555666554 8999
Q ss_pred EeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 87 FWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 87 ~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
||+|+... .+|+..+++|+.++..+.+++...+... +-.+++.++|.
T Consensus 71 VnnAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-~~G~ii~i~S~ 126 (234)
T d1o5ia_ 71 VLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEK-GWGRIVAITSF 126 (234)
T ss_dssp EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCG
T ss_pred EecccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhccccccccc-ccccccccccc
Confidence 99997632 1456677899888777776664432101 23466666653
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.43 E-value=2.9e-13 Score=108.25 Aligned_cols=105 Identities=10% Similarity=-0.026 Sum_probs=81.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC----------CCCCCceeEEEeeCCCHHHHHHHHH
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW----------FPTALVDRYITFDALDPTDTALKLS 77 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~----------~~~~~~~~~i~~Dl~d~~~~~~~~~ 77 (211)
.+|++|||||++.||+++++.|+ ++|++|++++|++++.. ....++. .+.+|++|++++.+.++
T Consensus 4 ~gK~alVTGas~GIG~aia~~la-----~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~-~~~~Dvs~~~~v~~~~~ 77 (272)
T d1xkqa_ 4 SNKTVIITGSSNGIGRTTAILFA-----QEGANVTITGRSSERLEETRQIILKSGVSEKQVN-SVVADVTTEDGQDQIIN 77 (272)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEE-EEECCTTSHHHHHHHHH
T ss_pred CCCEEEEeCcCcHHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceE-EEEccCCCHHHHHHHHH
Confidence 46999999999999999999999 79999999999864310 1224577 89999999998877776
Q ss_pred hccc---ccceEEeecccCCc-------------hhHHHHhhcHHHHHHHHHHHHhc
Q 028258 78 LISQ---EITNLFWVPLQVQE-------------SEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 78 ~~~~---~~~~v~~~a~~~~~-------------~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
.+.. .+|++||+|+.... .|...+++|+.++..+.+++...
T Consensus 78 ~~~~~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~ 134 (272)
T d1xkqa_ 78 STLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPH 134 (272)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred HHHHHhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhccc
Confidence 5432 38999999876321 25667789998887877776554
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.43 E-value=3.3e-13 Score=108.11 Aligned_cols=119 Identities=12% Similarity=-0.036 Sum_probs=86.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC----------CCCCCceeEEEeeCCCHHHHHHHHH
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW----------FPTALVDRYITFDALDPTDTALKLS 77 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~----------~~~~~~~~~i~~Dl~d~~~~~~~~~ 77 (211)
.+|++|||||++.||++++++|+ ++|++|++++|++++.. ....++. .+.+|++|++++.+.++
T Consensus 3 ~gK~alITGas~GIG~aia~~la-----~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~-~~~~Dv~~~~~v~~~~~ 76 (274)
T d1xhla_ 3 SGKSVIITGSSNGIGRSAAVIFA-----KEGAQVTITGRNEDRLEETKQQILKAGVPAEKIN-AVVADVTEASGQDDIIN 76 (274)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEE-EEECCTTSHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceE-EEEeeCCCHHHHHHHHH
Confidence 46999999999999999999999 79999999999764310 1124577 89999999998877776
Q ss_pred hccc---ccceEEeecccCC-----------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeec
Q 028258 78 LISQ---EITNLFWVPLQVQ-----------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTG 133 (211)
Q Consensus 78 ~~~~---~~~~v~~~a~~~~-----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~ 133 (211)
.+.. .+|+++|+|+... +.|+..+++|+.++..+.+++...+... +-..++.+|+
T Consensus 77 ~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~g~ii~~ss 145 (274)
T d1xhla_ 77 TTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKT-KGEIVNVSSI 145 (274)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEECCG
T ss_pred HHHHHcCCceEEEeecccccccccccccCCHHHHHHHHhhccccccccccccccccccc-ccccccchhh
Confidence 5432 3899999987521 1356677899998887777766543111 2345566555
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.43 E-value=1.8e-13 Score=109.05 Aligned_cols=105 Identities=17% Similarity=0.035 Sum_probs=80.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC----------CCCCCceeEEEeeCCCHHHHHHHHH
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW----------FPTALVDRYITFDALDPTDTALKLS 77 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~----------~~~~~~~~~i~~Dl~d~~~~~~~~~ 77 (211)
.+|++|||||++.||++++++|+ ++|++|++++|+.++.. ....++. .+.+|++|++++.+.++
T Consensus 4 ~gKvalVTGas~GIG~aia~~la-----~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~-~~~~Dvt~~~~v~~~~~ 77 (264)
T d1spxa_ 4 AEKVAIITGSSNGIGRATAVLFA-----REGAKVTITGRHAERLEETRQQILAAGVSEQNVN-SVVADVTTDAGQDEILS 77 (264)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEE-EEECCTTSHHHHHHHHH
T ss_pred CCCEEEEeCcCCHHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceE-EEEccCCCHHHHHHHHH
Confidence 46999999999999999999999 79999999999765310 1234578 89999999998877776
Q ss_pred hccc---ccceEEeecccCC-------------chhHHHHhhcHHHHHHHHHHHHhc
Q 028258 78 LISQ---EITNLFWVPLQVQ-------------ESEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 78 ~~~~---~~~~v~~~a~~~~-------------~~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
.+.. .+|++||+|+... ++|+..+++|+.++..+.+++.+.
T Consensus 78 ~~~~~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~ 134 (264)
T d1spxa_ 78 TTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPH 134 (264)
T ss_dssp HHHHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred HHHHHhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCc
Confidence 5432 3899999987521 146667889999887777766654
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.43 E-value=8.1e-13 Score=104.78 Aligned_cols=125 Identities=14% Similarity=-0.009 Sum_probs=89.4
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC---------CCCCCceeEEEeeCCCHHHHHHHHH
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW---------FPTALVDRYITFDALDPTDTALKLS 77 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~---------~~~~~~~~~i~~Dl~d~~~~~~~~~ 77 (211)
..+|+++|||||++||++++++|.+.. .+|++|++++|+.++.. ....++. .+.+|++|++++.+.++
T Consensus 4 L~gKvalITGas~GIG~aiA~~lA~~~--~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~-~~~~Dvs~~~~v~~l~~ 80 (259)
T d1oaaa_ 4 LGCAVCVLTGASRGFGRALAPQLARLL--SPGSVMLVSARSESMLRQLKEELGAQQPDLKVV-LAAADLGTEAGVQRLLS 80 (259)
T ss_dssp CBSEEEEESSCSSHHHHHHHHHHHTTB--CTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEE-EEECCTTSHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHhcc--cCCCEEEEEECCHHHHHHHHHHHHhhcCCceEE-EEEccCCCHHHHHHHHH
Confidence 346899999999999999999997200 37999999999865311 1134577 89999999998887765
Q ss_pred hccc-------ccceEEeecccCC------------chhHHHHhhcHHHHHHHHHHHHhcCCCCC-CceEEEEeecC
Q 028258 78 LISQ-------EITNLFWVPLQVQ------------ESEEVNIFKNSTMLKNVLSVLVSSNSGRS-RLRHVALLTGT 134 (211)
Q Consensus 78 ~~~~-------~~~~v~~~a~~~~------------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~~~~~s~~ 134 (211)
.+.. .++.++++++... ..|...+++|+.++..+.+++...+.... .-.+++++||.
T Consensus 81 ~~~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~ 157 (259)
T d1oaaa_ 81 AVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSL 157 (259)
T ss_dssp HHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCG
T ss_pred HHHHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccc
Confidence 4321 2567888776421 13556789999999999998887653222 13577777764
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=99.42 E-value=1.4e-13 Score=108.47 Aligned_cols=120 Identities=13% Similarity=-0.041 Sum_probs=87.7
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC-CC-------CCCCCceeEEEeeCCCHHHHHHHHHhccc
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP-GW-------FPTALVDRYITFDALDPTDTALKLSLISQ 81 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~-~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~ 81 (211)
+.||||||++.||++++++|+ ++|++|++..++... .. ....++. .+.+|++|++++++.++.+..
T Consensus 2 pV~lITGas~GIG~a~a~~la-----~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~-~~~~Dv~~~~~v~~~~~~~~~ 75 (244)
T d1edoa_ 2 PVVVVTGASRGIGKAIALSLG-----KAGCKVLVNYARSAKAAEEVSKQIEAYGGQAI-TFGGDVSKEADVEAMMKTAID 75 (244)
T ss_dssp CEEEETTCSSHHHHHHHHHHH-----HTTCEEEEEESSCHHHHHHHHHHHHHHTCEEE-EEECCTTSHHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEE-EEeCCCCCHHHHHHHHHHHHH
Confidence 689999999999999999999 799999887654332 10 0135677 889999999988777765421
Q ss_pred ---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCee
Q 028258 82 ---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKH 136 (211)
Q Consensus 82 ---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~ 136 (211)
.+|.+||+|+... .+|+..+++|+.++..+.+++.+.|... +-.+++.+||...
T Consensus 76 ~~g~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~G~IVnisS~~~ 141 (244)
T d1edoa_ 76 AWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKK-RKGRIINIASVVG 141 (244)
T ss_dssp HSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCTHH
T ss_pred HcCCCCccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHc-CCcEEEEEcChhh
Confidence 3899999997643 2566788999998888777665543111 2357888887543
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.41 E-value=1.1e-12 Score=103.43 Aligned_cols=120 Identities=10% Similarity=0.026 Sum_probs=90.9
Q ss_pred CCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC--CCCCCCceeEEEeeCCCHHHHHHHHHhccccc
Q 028258 6 QNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG--WFPTALVDRYITFDALDPTDTALKLSLISQEI 83 (211)
Q Consensus 6 ~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~--~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~ 83 (211)
.-.+|++|||||++.||+++++.|+ ++|++|++++|++++. .....+++ ...+|+.+.+.++...+.... +
T Consensus 3 ~l~gK~alITGas~GIG~aia~~la-----~~G~~Vi~~~r~~~~l~~~~~~~~~~-~~~~d~~~~~~~~~~~~~~~~-i 75 (245)
T d2ag5a1 3 RLDGKVIILTAAAQGIGQAAALAFA-----REGAKVIATDINESKLQELEKYPGIQ-TRVLDVTKKKQIDQFANEVER-L 75 (245)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHGGGGGSTTEE-EEECCTTCHHHHHHHHHHCSC-C
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHH-----HcCCEEEEEeCCHHHHHHHHhccCCc-eeeeecccccccccccccccc-c
Confidence 3457999999999999999999999 7999999999986532 12346778 889999998888888877765 8
Q ss_pred ceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeec
Q 028258 84 TNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTG 133 (211)
Q Consensus 84 ~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~ 133 (211)
|.+||+++.... .|...+++|+.++..+.+++...+... +-.+++.++|
T Consensus 76 d~lVn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~-~~g~Ii~isS 133 (245)
T d2ag5a1 76 DVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQ-KSGNIINMSS 133 (245)
T ss_dssp SEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECC
T ss_pred eeEEecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccC-CCceeeeeec
Confidence 999999886432 466678999988888777665432101 2346677765
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.41 E-value=7.9e-13 Score=106.43 Aligned_cols=120 Identities=17% Similarity=0.168 Sum_probs=85.1
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEE---EEeCCCCCC----------CCCCCCceeEEEeeCCCHHHHHHH
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVY---GAARRPPPG----------WFPTALVDRYITFDALDPTDTALK 75 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~---~~~R~~~~~----------~~~~~~~~~~i~~Dl~d~~~~~~~ 75 (211)
+|.|||||||++||++++++|+ +.|.+|+ ...|+.... .....++. .+.+|++|++++...
T Consensus 2 kkVvlITGassGIG~a~A~~la-----~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~Dv~~~~~~~~~ 75 (285)
T d1jtva_ 2 RTVVLITGCSSGIGLHLAVRLA-----SDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLE-TLQLDVRDSKSVAAA 75 (285)
T ss_dssp CEEEEESCCSSHHHHHHHHHHH-----TCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEE-EEECCTTCHHHHHHH
T ss_pred CCEEEEccCCCHHHHHHHHHHH-----HCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceE-EEeccccchHhhhhh
Confidence 5789999999999999999999 5776644 344543321 11245778 899999999999988
Q ss_pred HHhccc-ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 76 LSLISQ-EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 76 ~~~~~~-~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
++.+.. .+|+++++++... ..+...+++|+.++.++.+++...|... +-.+++.+||..
T Consensus 76 ~~~~~~g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~-~~G~Iv~isS~~ 144 (285)
T d1jtva_ 76 RERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRR-GSGRVLVTGSVG 144 (285)
T ss_dssp HHTCTTSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEEEGG
T ss_pred hhhccccchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHc-CCCceEEEechh
Confidence 877642 4899999987633 1456678999998877777665443101 235778887743
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=99.40 E-value=1.1e-12 Score=104.87 Aligned_cols=117 Identities=12% Similarity=-0.084 Sum_probs=88.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC--------CCCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG--------WFPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~--------~~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
.+|++||||||+.||++++++|+ ++|++|++++|+.... ......+. ++.+|++|++++.+.++.+
T Consensus 17 ~gK~~lITGas~GIG~aia~~la-----~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~-~~~~D~~~~~~v~~~~~~~ 90 (272)
T d1g0oa_ 17 EGKVALVTGAGRGIGREMAMELG-----RRGCKVIVNYANSTESAEEVVAAIKKNGSDAA-CVKANVGVVEDIVRMFEEA 90 (272)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHH-----HTTCEEEEEESSCHHHHHHHHHHHHHTTCCEE-EEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHH-----HcCCEEEEEeCCchHHHHHHHHHHHhhCCcee-eEeCCCCCHHHHHHHHHHH
Confidence 57999999999999999999999 7999999998875421 01235677 8899999999887777654
Q ss_pred cc---ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeec
Q 028258 80 SQ---EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTG 133 (211)
Q Consensus 80 ~~---~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~ 133 (211)
.. .+|+++|+++.... .+...+++|+.++..+.+++...+... .+++.++|
T Consensus 91 ~~~~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~---g~~i~i~s 153 (272)
T d1g0oa_ 91 VKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIG---GRLILMGS 153 (272)
T ss_dssp HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTT---CEEEEECC
T ss_pred HHHhCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccc---cccccccc
Confidence 32 38999999876431 455677999999999999888775322 34444443
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=99.37 E-value=4.8e-13 Score=107.25 Aligned_cols=118 Identities=15% Similarity=-0.029 Sum_probs=85.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC----CCCCCceeEEEeeCCCHHHHHHHHHhccc--
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW----FPTALVDRYITFDALDPTDTALKLSLISQ-- 81 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~----~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~-- 81 (211)
.+|++|||||++.||++++++|+ ++|++|++++|++++.. ....++. .+.+|+++++++.+.++.+..
T Consensus 4 ~gK~alITGas~GIG~aia~~la-----~~Ga~V~i~~r~~~~l~~~~~~~~~~~~-~~~~Dv~~~~~~~~~~~~~~~~~ 77 (276)
T d1bdba_ 4 KGEAVLITGGASGLGRALVDRFV-----AEGAKVAVLDKSAERLAELETDHGDNVL-GIVGDVRSLEDQKQAASRCVARF 77 (276)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHGGGEE-EEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHcCCCee-EEecccccHHHHHHHHHHHHHHh
Confidence 46999999999999999999999 79999999999865421 0135677 889999999887777654321
Q ss_pred -ccceEEeecccCC----------c----hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeec
Q 028258 82 -EITNLFWVPLQVQ----------E----SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTG 133 (211)
Q Consensus 82 -~~~~v~~~a~~~~----------~----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~ 133 (211)
.+|+++|+|+... . .|+..+++|+.++..+.+++...+... + ..+++++|
T Consensus 78 g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~-~-g~iI~i~S 142 (276)
T d1bdba_ 78 GKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVAS-R-GNVIFTIS 142 (276)
T ss_dssp SCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-T-CEEEEECC
T ss_pred CCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhc-C-CCceeeee
Confidence 3899999997521 0 256678899988877777665443111 1 35566555
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=99.37 E-value=1.1e-12 Score=103.89 Aligned_cols=119 Identities=13% Similarity=-0.021 Sum_probs=85.6
Q ss_pred CCCCeEEEEcCCC--hHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC------CCCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 7 NPKSVALIIGVTG--ISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW------FPTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 7 ~~~~~ilVtGatG--~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
..+|++|||||+| .||++++++|+ ++|++|++..|++.... ....... .+.+|++|++++++.++.
T Consensus 6 L~gK~alITGas~~~GIG~aiA~~la-----~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~v~~~~~~ 79 (256)
T d1ulua_ 6 LSGKKALVMGVTNQRSLGFAIAAKLK-----EAGAEVALSYQAERLRPEAEKLAEALGGAL-LFRADVTQDEELDALFAG 79 (256)
T ss_dssp CTTCEEEEESCCCSSSHHHHHHHHHH-----HTTCEEEEEESSGGGHHHHHHHHHHTTCCE-EEECCTTCHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHH-----HCCCEEEEEeCcHHHHHHHHHhhhccCccc-ccccccCCHHHHHHHHHH
Confidence 3579999999998 89999999999 69999998888754210 0124567 889999999888777655
Q ss_pred ccc---ccceEEeecccCC-------------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 79 ISQ---EITNLFWVPLQVQ-------------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 79 ~~~---~~~~v~~~a~~~~-------------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
+.. .+|++||+|+... .+|...+++|+.++..+.+++...+. +-.+++++||.
T Consensus 80 ~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~---~~G~Iv~isS~ 148 (256)
T d1ulua_ 80 VKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLR---EGGGIVTLTYY 148 (256)
T ss_dssp HHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEE---EEEEEEEEECG
T ss_pred HHHhcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhc---cCCEEEEEeeh
Confidence 431 3899999987532 13445678898888888877665421 12456776663
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=99.37 E-value=1e-12 Score=104.22 Aligned_cols=106 Identities=13% Similarity=-0.116 Sum_probs=81.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC--------CCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW--------FPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~--------~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
.+|+||||||++.||++++++|+ ++|++|++..|+..... ....++. .+.+|++|++++.+.++.+
T Consensus 5 ~GK~alITGas~GIG~aia~~la-----~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~-~~~~D~~~~~~v~~~~~~~ 78 (259)
T d1ja9a_ 5 AGKVALTTGAGRGIGRGIAIELG-----RRGASVVVNYGSSSKAAEEVVAELKKLGAQGV-AIQADISKPSEVVALFDKA 78 (259)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHH-----HTTCEEEEEESSCHHHHHHHHHHHHHTTCCEE-EEECCTTSHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHH-----HcCCEEEEEcCCChHHHHHHHHHHHHcCCCce-EecCCCCCHHHHHHHHHHH
Confidence 46999999999999999999999 79999998777654310 1235678 8999999998887776644
Q ss_pred cc---ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcC
Q 028258 80 SQ---EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSN 119 (211)
Q Consensus 80 ~~---~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~ 119 (211)
.. .+|++||+++.... .++..+++|+.+..++++.+...+
T Consensus 79 ~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m 130 (259)
T d1ja9a_ 79 VSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHC 130 (259)
T ss_dssp HHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHE
T ss_pred HHHcCCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhh
Confidence 32 38999999987431 455678999998888888877663
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.34 E-value=7.3e-13 Score=105.94 Aligned_cols=119 Identities=17% Similarity=0.047 Sum_probs=89.8
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHhccc
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSLISQ 81 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~ 81 (211)
++.+|||||+++||.+++++|++ ..|++|++..|+.++.. ....+++ ++.+|++|.+++.+.++.+..
T Consensus 3 ~rVAlVTGas~GIG~a~A~~la~----~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~-~~~~Dvs~~~sv~~~~~~~~~ 77 (275)
T d1wmaa1 3 IHVALVTGGNKGIGLAIVRDLCR----LFSGDVVLTARDVTRGQAAVQQLQAEGLSPR-FHQLDIDDLQSIRALRDFLRK 77 (275)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHH----HSSSEEEEEESSHHHHHHHHHHHHHTTCCCE-EEECCTTCHHHHHHHHHHHHH
T ss_pred CeEEEECCCCCHHHHHHHHHHHH----hCCCEEEEEECCHHHHHHHHHHHHhcCCcEE-EEEEecCCHHHHHHHHHHHHH
Confidence 46679999999999999999983 34899999999876421 1246788 999999999988777655432
Q ss_pred ---ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 82 ---EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 82 ---~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
.+|++||+|+.... ++...+++|+.++..+.+.+...+. +-.+++.+||..
T Consensus 78 ~~g~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~---~~g~ivnisS~~ 140 (275)
T d1wmaa1 78 EYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIK---PQGRVVNVSSIM 140 (275)
T ss_dssp HHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEE---EEEEEEEECCHH
T ss_pred hcCCcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---hcCCcccccccc
Confidence 39999999987432 3445678999999999998877642 224677777643
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.33 E-value=1.2e-11 Score=96.67 Aligned_cols=114 Identities=9% Similarity=0.016 Sum_probs=79.0
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhc----c-ccc
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLI----S-QEI 83 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~----~-~~~ 83 (211)
+|+||||||+|.||++++++|+ ++|++|++++|++... ..... .+.+|..+.+..+.....+ . ..+
T Consensus 2 gK~vlITGas~GIG~a~a~~l~-----~~G~~V~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i 72 (236)
T d1dhra_ 2 ARRVLVYGGRGALGSRCVQAFR-----ARNWWVASIDVVENEE---ASASV-IVKMTDSFTEQADQVTAEVGKLLGDQKV 72 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHH-----TTTCEEEEEESSCCTT---SSEEE-ECCCCSCHHHHHHHHHHHHHHHHTTCCE
T ss_pred CCEEEEECCCCHHHHHHHHHHH-----HCCCEEEEEeCCcccc---ccccc-eeecccCcHHHHHHHHHHHHHHhCCCCc
Confidence 6999999999999999999999 7999999999876542 12223 4456666665443332221 1 138
Q ss_pred ceEEeecccCC----------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 84 TNLFWVPLQVQ----------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 84 ~~v~~~a~~~~----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
|.++|+|+... ..++..+++|+.++.++.+++...++ +-.+++++||.
T Consensus 73 D~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~---~~G~Iv~isS~ 130 (236)
T d1dhra_ 73 DAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLK---EGGLLTLAGAK 130 (236)
T ss_dssp EEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEE---EEEEEEEECCG
T ss_pred eEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcc---cccceeEEccH
Confidence 99999987411 13455679999998888888876642 22567777764
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=99.29 E-value=5.7e-12 Score=101.43 Aligned_cols=101 Identities=15% Similarity=-0.092 Sum_probs=74.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC--------CCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW--------FPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~--------~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
.+|++|||||||+||++++++|+ ++|++|++++|+..+.. .....+. .+.+|++|.+++...++.+
T Consensus 24 ~gK~alITGas~GIG~aiA~~la-----~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~-~~~~D~~~~~~v~~~~~~~ 97 (294)
T d1w6ua_ 24 QGKVAFITGGGTGLGKGMTTLLS-----SLGAQCVIASRKMDVLKATAEQISSQTGNKVH-AIQCDVRDPDMVQNTVSEL 97 (294)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHHHHHSSCEE-EEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHH-----HcCCEEEEEECCHHHHHHHHHHHHHhcCCceE-EEEecccChHHHHHHhhhh
Confidence 35999999999999999999999 79999999999865311 0135667 8899999999887666543
Q ss_pred cc---ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHH
Q 028258 80 SQ---EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSV 114 (211)
Q Consensus 80 ~~---~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~ 114 (211)
.. .+|+++|+++.... ++...+.+|......+...
T Consensus 98 ~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~ 144 (294)
T d1w6ua_ 98 IKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLE 144 (294)
T ss_dssp HHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhccccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhh
Confidence 21 38999999986432 2344566676665554443
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.29 E-value=8.4e-12 Score=101.13 Aligned_cols=120 Identities=8% Similarity=-0.108 Sum_probs=86.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCC--C-----------CCCceeEEEeeCCCHHHHHH
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF--P-----------TALVDRYITFDALDPTDTAL 74 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~--~-----------~~~~~~~i~~Dl~d~~~~~~ 74 (211)
.+|++|||||+++||++++++|+ ++|++|++.+|+.+.... . ..... ...+|+.|.+++++
T Consensus 6 ~gKvalITGas~GIG~aiA~~la-----~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~d~~~~~~~~~ 79 (302)
T d1gz6a_ 6 DGRVVLVTGAGGGLGRAYALAFA-----ERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGG-KAVANYDSVEAGEK 79 (302)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHH-----HTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTC-EEEEECCCGGGHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHH-----HcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhccc-ccccccchHHHHHH
Confidence 47999999999999999999999 799999999886543210 0 12345 67889999876655
Q ss_pred HHHh----cccccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 75 KLSL----ISQEITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 75 ~~~~----~~~~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
.++. .. .+|.+||+|+.... +|+..+++|+.++.++.+++...+... +-.+|+.+||..
T Consensus 80 ~v~~~~~~~G-~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~-~~G~IV~isS~~ 151 (302)
T d1gz6a_ 80 LVKTALDTFG-RIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQ-NYGRIIMTASAS 151 (302)
T ss_dssp HHHHHHHHTS-CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TCEEEEEECCHH
T ss_pred HHHHHHHHcC-CCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhC-CCcEEEEeCChh
Confidence 5543 33 38999999986432 566788999999888887766543111 235888888754
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.25 E-value=7.4e-12 Score=99.71 Aligned_cols=120 Identities=12% Similarity=-0.021 Sum_probs=82.8
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC--------CCCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW--------FPTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~--------~~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
..+|++||||||++||++++++|+ ++|++|++++|+.++.. .....+. .+.+|+.+.+.+...++.
T Consensus 12 L~GK~alITGassGIG~aiA~~la-----~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~~ 85 (269)
T d1xu9a_ 12 LQGKKVIVTGASKGIGREMAYHLA-----KMGAHVVVTARSKETLQKVVSHCLELGAASAH-YIAGTMEDMTFAEQFVAQ 85 (269)
T ss_dssp GTTCEEEESSCSSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHHHHTCSEEE-EEECCTTCHHHHHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHHhhhhcccch-hhhhhhhhHHHHHHHHHH
Confidence 357999999999999999999999 69999999999865311 1234566 788999998766555443
Q ss_pred cc---cccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 79 IS---QEITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 79 ~~---~~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
+. ..++.++++++.... .+...+++|+.++..+.+.+...+... -.+++.+||.
T Consensus 86 ~~~~~g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~--~G~ii~isS~ 151 (269)
T d1xu9a_ 86 AGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS--NGSIVVVSSL 151 (269)
T ss_dssp HHHHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEEEG
T ss_pred HHHHhCCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhc--CCcceEeccc
Confidence 32 127888888765321 344567889888777766665432101 1466777664
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.24 E-value=3.7e-11 Score=93.64 Aligned_cols=113 Identities=10% Similarity=0.020 Sum_probs=76.7
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHh----cc-cccc
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSL----IS-QEIT 84 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~----~~-~~~~ 84 (211)
++||||||+|.||++++++|+ ++|++|++++|++.... .... .+.+|..+.+......+. .+ ..+|
T Consensus 3 gkVlITGas~GIG~aia~~l~-----~~G~~V~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~iD 73 (235)
T d1ooea_ 3 GKVIVYGGKGALGSAILEFFK-----KNGYTVLNIDLSANDQA---DSNI-LVDGNKNWTEQEQSILEQTASSLQGSQVD 73 (235)
T ss_dssp EEEEEETTTSHHHHHHHHHHH-----HTTEEEEEEESSCCTTS---SEEE-ECCTTSCHHHHHHHHHHHHHHHHTTCCEE
T ss_pred CEEEEECCCCHHHHHHHHHHH-----HCCCEEEEEECCchhcc---cccc-eeccccCchhHHHHHHHHHHHHhcCCCee
Confidence 578999999999999999999 69999999999876421 2223 445666665443322211 11 1389
Q ss_pred eEEeecccCC------c----hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 85 NLFWVPLQVQ------E----SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 85 ~v~~~a~~~~------~----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
.+||+|+... . .++..+++|+.++..+.+++...++ +-.+++++||.
T Consensus 74 ~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~---~~g~Iv~isS~ 130 (235)
T d1ooea_ 74 GVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLK---PGGLLQLTGAA 130 (235)
T ss_dssp EEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEE---EEEEEEEECCG
T ss_pred EEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccc---cceEEEEeccH
Confidence 9999997521 1 2444678999988888887776542 12467777764
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.19 E-value=1.1e-12 Score=103.76 Aligned_cols=118 Identities=12% Similarity=0.102 Sum_probs=79.4
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-CCCCCceeEEEeeCCCHHHHHHHHHhccc---ccceE
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-FPTALVDRYITFDALDPTDTALKLSLISQ---EITNL 86 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~---~~~~v 86 (211)
++|||||+++||++++++|+ ++|++|++.+|+..... ....... +..+|++|.+++++.++.+.. .+|++
T Consensus 2 TAlVTGas~GiG~aiA~~la-----~~Ga~V~i~~r~~~~~~~~~~~~~~-~~~~dv~~~~~~~~~~~~~~~~~G~iDiL 75 (252)
T d1zmta1 2 TAIVTNVKHFGGMGSALRLS-----EAGHTVACHDESFKQKDELEAFAET-YPQLKPMSEQEPAELIEAVTSAYGQVDVL 75 (252)
T ss_dssp EEEESSTTSTTHHHHHHHHH-----HTTCEEEECCGGGGSHHHHHHHHHH-CTTSEECCCCSHHHHHHHHHHHHSCCCEE
T ss_pred EEEEECCCCHHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHhhhCc-EEEeccCCHHHHHHHHHHHHHHcCCCCEE
Confidence 68999999999999999999 79999999998765421 0111223 456788887666555543321 38999
Q ss_pred EeecccCC----------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 87 FWVPLQVQ----------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 87 ~~~a~~~~----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
||+|+... .+|...+++|+.++.++.+++...+... +-.+++++||..
T Consensus 76 VnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~-~~G~IV~isS~~ 133 (252)
T d1zmta1 76 VSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKR-KSGHIIFITSAT 133 (252)
T ss_dssp EEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEECCST
T ss_pred EECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhccc-ccceeecccccc
Confidence 99987521 1355677889888777777655443101 225678887743
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.12 E-value=3.2e-10 Score=88.76 Aligned_cols=123 Identities=15% Similarity=0.009 Sum_probs=83.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC----CCCCCceeEEEeeCCCHHHHHHHHHhccc--
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW----FPTALVDRYITFDALDPTDTALKLSLISQ-- 81 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~----~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~-- 81 (211)
++|++|||||++.||++++++|+ ++|++|++++|+.+... ....... ...+|+.+.+.+++....+..
T Consensus 4 kGKvalITGas~GIG~aia~~la-----~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 77 (248)
T d2o23a1 4 KGLVAVITGGASGLGLATAERLV-----GQGASAVLLDLPNSGGEAQAKKLGNNCV-FAPADVTSEKDVQTALALAKGKF 77 (248)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEECTTSSHHHHHHHHCTTEE-EEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEeCChHHHHHHHHHhCCCcc-ccccccccccccccccccccccc
Confidence 47999999999999999999999 79999999999876521 0135566 788999998766555433211
Q ss_pred -ccceEEeecccC--------C-------chhHHHHhhcHHHHHHHHHHHHhcCCC-----CCCceEEEEeecCee
Q 028258 82 -EITNLFWVPLQV--------Q-------ESEEVNIFKNSTMLKNVLSVLVSSNSG-----RSRLRHVALLTGTKH 136 (211)
Q Consensus 82 -~~~~v~~~a~~~--------~-------~~~~~~~~~n~~~~~~l~~~~~~~~~~-----~~~~~~~~~~s~~~~ 136 (211)
..+.+++.+... . ..|...+++|+.++.++.+++...+.. ..+-.+++++||...
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~ 153 (248)
T d2o23a1 78 GRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAA 153 (248)
T ss_dssp SCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHH
T ss_pred ccccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhh
Confidence 145555443221 0 145567899999988888877553210 112246788877543
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Probab=99.02 E-value=1.6e-09 Score=84.99 Aligned_cols=117 Identities=8% Similarity=-0.065 Sum_probs=78.6
Q ss_pred CCCeEEEEcCCC--hHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC------CCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 8 PKSVALIIGVTG--ISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW------FPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 8 ~~~~ilVtGatG--~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
.+|++|||||+| .||+++++.|+ ++|++|++..|++.... ....... .+..|+.+..++...+...
T Consensus 4 ~gK~~lITGass~~GIG~aiA~~l~-----~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 77 (258)
T d1qsga_ 4 SGKRILVTGVASKLSIAYGIAQAMH-----REGAELAFTYQNDKLKGRVEEFAAQLGSDI-VLQCDVAEDASIDTMFAEL 77 (258)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHH-----HTTCEEEEEESSTTTHHHHHHHHHHTTCCC-EEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCCCchhHHHHHHHHHH-----HcCCEEEEEeCCHHHHHHHHHHHhhcCCcc-eeecccchHHHHHHHHHHh
Confidence 479999999999 89999999999 79999999999754311 0134566 8889999988766665443
Q ss_pred cc---ccceEEeecccCCc--------------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeec
Q 028258 80 SQ---EITNLFWVPLQVQE--------------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTG 133 (211)
Q Consensus 80 ~~---~~~~v~~~a~~~~~--------------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~ 133 (211)
.. .+|.++|+++.... .+.....+|..+...+.+++...+ .+-..++.+|+
T Consensus 78 ~~~~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~Ii~iss 145 (258)
T d1qsga_ 78 GKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSML---NPGSALLTLSY 145 (258)
T ss_dssp HTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGE---EEEEEEEEEEC
T ss_pred hhcccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhc---cCCcEEEEecc
Confidence 22 37888888765321 122234566667667777666542 12234555555
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Probab=99.01 E-value=2.1e-09 Score=85.05 Aligned_cols=80 Identities=8% Similarity=-0.066 Sum_probs=61.4
Q ss_pred CCCeEEEEcCCC--hHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC------CCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 8 PKSVALIIGVTG--ISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW------FPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 8 ~~~~ilVtGatG--~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
++|++|||||+| .||.+++++|+ ++|++|++++|++.... ....... +..+|+++.+++.+.+..+
T Consensus 4 ~gK~alITGaag~~GIG~AiA~~la-----~~Ga~V~i~~r~~~~~~~~~~l~~~~~~~~-~~~~d~~~~~~~~~~~~~~ 77 (274)
T d2pd4a1 4 KGKKGLIVGVANNKSIAYGIAQSCF-----NQGATLAFTYLNESLEKRVRPIAQELNSPY-VYELDVSKEEHFKSLYNSV 77 (274)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHH-----TTTCEEEEEESSTTTHHHHHHHHHHTTCCC-EEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCcHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHhhCCcee-EeeecccchhhHHHHHHHH
Confidence 479999999887 89999999999 79999999999854210 0135566 8899999998776665443
Q ss_pred cc---ccceEEeecccC
Q 028258 80 SQ---EITNLFWVPLQV 93 (211)
Q Consensus 80 ~~---~~~~v~~~a~~~ 93 (211)
.. .+|+++++++..
T Consensus 78 ~~~~g~id~lV~nag~~ 94 (274)
T d2pd4a1 78 KKDLGSLDFIVHSVAFA 94 (274)
T ss_dssp HHHTSCEEEEEECCCCC
T ss_pred HHHcCCCCeEEeecccc
Confidence 21 388999988763
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Probab=99.00 E-value=5.9e-11 Score=89.74 Aligned_cols=76 Identities=17% Similarity=0.070 Sum_probs=62.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC------CCCCCceeEEEeeCCCHHHHHHHHHhccc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW------FPTALVDRYITFDALDPTDTALKLSLISQ 81 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~ 81 (211)
.+|+++||||+|+||++++++|+ ..|++|++++|+.++.. .....+. ...+|++|.+++.+.+.+
T Consensus 22 ~gK~vlItGasgGIG~~ia~~la-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~~--- 92 (191)
T d1luaa1 22 KGKKAVVLAGTGPVGMRSAALLA-----GEGAEVVLCGRKLDKAQAAADSVNKRFKVN-VTAAETADDASRAEAVKG--- 92 (191)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESSHHHHHHHHHHHHHHHTCC-CEEEECCSHHHHHHHTTT---
T ss_pred CCCEEEEECCCHHHHHHHHHHHH-----hhccchhhcccchHHHHHHHHHHHhccchh-hhhhhcccHHHHHHHhcC---
Confidence 57999999999999999999999 68999999999875421 1124566 789999999999888875
Q ss_pred ccceEEeecccC
Q 028258 82 EITNLFWVPLQV 93 (211)
Q Consensus 82 ~~~~v~~~a~~~ 93 (211)
+|.|||+++..
T Consensus 93 -iDilin~Ag~g 103 (191)
T d1luaa1 93 -AHFVFTAGAIG 103 (191)
T ss_dssp -CSEEEECCCTT
T ss_pred -cCeeeecCccc
Confidence 68899998753
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=98.99 E-value=4.4e-09 Score=81.37 Aligned_cols=116 Identities=16% Similarity=0.021 Sum_probs=74.6
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhccc--ccceEE
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQ--EITNLF 87 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~--~~~~v~ 87 (211)
|++||||||+.||++++++|+ ++|++|++++|+++. .+.. .+.+|+++............. ..+.++
T Consensus 2 K~alITGas~GIG~aiA~~la-----~~Ga~V~i~~~~~~~-----~~~~-~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 70 (241)
T d1uaya_ 2 RSALVTGGASGLGRAAALALK-----ARGYRVVVLDLRREG-----EDLI-YVEGDVTREEDVRRAVARAQEEAPLFAVV 70 (241)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-----HHTCEEEEEESSCCS-----SSSE-EEECCTTCHHHHHHHHHHHHHHSCEEEEE
T ss_pred CEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEECCccc-----ccce-EeeccccchhhhHHHHHhhhccccccchh
Confidence 899999999999999999999 799999999998653 3455 778999998765554433211 122233
Q ss_pred eeccc---------CC----chhHHHHhhcHHHHHHHHHHHHhcCCC-----CCCceEEEEeecCee
Q 028258 88 WVPLQ---------VQ----ESEEVNIFKNSTMLKNVLSVLVSSNSG-----RSRLRHVALLTGTKH 136 (211)
Q Consensus 88 ~~a~~---------~~----~~~~~~~~~n~~~~~~l~~~~~~~~~~-----~~~~~~~~~~s~~~~ 136 (211)
..++. .. ..+...+++|..+...+...+...+.. ..+-.+++.+||...
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~ 137 (241)
T d1uaya_ 71 SAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAA 137 (241)
T ss_dssp ECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHH
T ss_pred hhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhh
Confidence 22221 00 134556788887776666655432100 112357888877543
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Probab=98.95 E-value=5.6e-09 Score=82.11 Aligned_cols=81 Identities=7% Similarity=-0.054 Sum_probs=60.4
Q ss_pred CCCCeEEEEcCCC--hHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC-----CCCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 7 NPKSVALIIGVTG--ISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-----WFPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 7 ~~~~~ilVtGatG--~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~-----~~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
+.+|++|||||+| +||.+++++|+ ++|++|+++.|+..+. .....+.. .+.+|+++++++...++.+
T Consensus 4 l~gK~~lItGaag~~GIG~aiA~~la-----~~Ga~Vil~~~~~~~~~~~~~~~~~~~~~-~~~~dv~~~~~~~~~~~~v 77 (268)
T d2h7ma1 4 LDGKRILVSGIITDSSIAFHIARVAQ-----EQGAQLVLTGFDRLRLIQRITDRLPAKAP-LLELDVQNEEHLASLAGRV 77 (268)
T ss_dssp TTTCEEEECCCSSTTCHHHHHHHHHH-----HTTCEEEEEECSCHHHHHHHHTTSSSCCC-EEECCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHH-----HcCCEEEEEeCChHHHHHHHHHHcCCcee-eEeeecccccccccccchh
Confidence 4579999999654 69999999999 7999999999876531 12245667 8899999997665554443
Q ss_pred c------cccceEEeecccC
Q 028258 80 S------QEITNLFWVPLQV 93 (211)
Q Consensus 80 ~------~~~~~v~~~a~~~ 93 (211)
. ..+|.++|+++..
T Consensus 78 ~~~~~~~~~ld~~i~~ag~~ 97 (268)
T d2h7ma1 78 TEAIGAGNKLDGVVHSIGFM 97 (268)
T ss_dssp HHHHCTTCCEEEEEECCCCC
T ss_pred hhccccCCCcceeeeccccc
Confidence 2 1278899998753
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=98.78 E-value=2.3e-08 Score=77.99 Aligned_cols=90 Identities=12% Similarity=0.077 Sum_probs=62.9
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHH----hcccccc
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLS----LISQEIT 84 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~----~~~~~~~ 84 (211)
+|+||||||++.||++++++|+ ++|++|++++|+..+ ...|+.+.+....... .....+|
T Consensus 1 mkVvlITGas~GIG~aiA~~la-----~~Ga~V~~~~~~~~~-----------~~~d~~~~~~~~~~~~~~~~~~~~~id 64 (257)
T d1fjha_ 1 MSIIVISGCATGIGAATRKVLE-----AAGHQIVGIDIRDAE-----------VIADLSTAEGRKQAIADVLAKCSKGMD 64 (257)
T ss_dssp CCEEEEETTTSHHHHHHHHHHH-----HTTCEEEEEESSSSS-----------EECCTTSHHHHHHHHHHHHTTCTTCCS
T ss_pred CCEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEECChHH-----------HHHHhcCHHHHHHHHHHHHHHhCCCCc
Confidence 3899999999999999999999 799999999987542 2467777765444432 2222388
Q ss_pred eEEeecccCCc--hhHHHHhhcHHHHHHHHHH
Q 028258 85 NLFWVPLQVQE--SEEVNIFKNSTMLKNVLSV 114 (211)
Q Consensus 85 ~v~~~a~~~~~--~~~~~~~~n~~~~~~l~~~ 114 (211)
.++++|+.... .+.....+|..+...+.+.
T Consensus 65 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (257)
T d1fjha_ 65 GLVLCAGLGPQTKVLGNVVSVNYFGATELMDA 96 (257)
T ss_dssp EEEECCCCCTTCSSHHHHHHHHTHHHHHHHHH
T ss_pred EEEEcCCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 99999876432 3444555666655554443
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=98.74 E-value=7.8e-08 Score=76.48 Aligned_cols=36 Identities=17% Similarity=0.157 Sum_probs=32.2
Q ss_pred CCCCeEEEEcCCC--hHHHHHHHHhhCCCCCCCCcEEEEEeCC
Q 028258 7 NPKSVALIIGVTG--ISGLSLAEALKNPTTPGSPWKVYGAARR 47 (211)
Q Consensus 7 ~~~~~ilVtGatG--~iG~~l~~~L~~~~~~~~g~~V~~~~R~ 47 (211)
..+|++|||||+| .||++++++|+ ++|++|++..|+
T Consensus 6 L~gK~alVTGass~~GIG~aiA~~la-----~~Ga~Vvi~~~~ 43 (297)
T d1d7oa_ 6 LRGKRAFIAGIADDNGYGWAVAKSLA-----AAGAEILVGTWV 43 (297)
T ss_dssp CTTCEEEEECCSSSSSHHHHHHHHHH-----HTTCEEEEEEEH
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHH-----HCCCEEEEEeCc
Confidence 3579999999987 89999999999 799999988874
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Probab=98.68 E-value=4e-08 Score=77.68 Aligned_cols=78 Identities=18% Similarity=0.010 Sum_probs=55.2
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC--------------------------CCCCCceeEEE
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW--------------------------FPTALVDRYIT 63 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~--------------------------~~~~~~~~~i~ 63 (211)
..+|||||++.||++++++|+ +.|++|++..|+..... .....+. ...
T Consensus 3 pVAlITGas~GIG~aiA~~la-----~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~-~~~ 76 (284)
T d1e7wa_ 3 PVALVTGAAKRLGRSIAEGLH-----AEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGA-DGS 76 (284)
T ss_dssp CEEEETTCSSHHHHHHHHHHH-----HTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC-----C
T ss_pred CEEEEeCCCCHHHHHHHHHHH-----HcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccc-ccc
Confidence 679999999999999999999 79999998877643200 0011233 456
Q ss_pred eeCCCHHHHHHHHHhccc---ccceEEeecccC
Q 028258 64 FDALDPTDTALKLSLISQ---EITNLFWVPLQV 93 (211)
Q Consensus 64 ~Dl~d~~~~~~~~~~~~~---~~~~v~~~a~~~ 93 (211)
+|+++.+++.+.++.+.. .+|++||+|+..
T Consensus 77 ~dv~~~~~v~~~~~~~~~~~G~iDiLVnnAG~~ 109 (284)
T d1e7wa_ 77 APVTLFTRCAELVAACYTHWGRCDVLVNNASSF 109 (284)
T ss_dssp CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred ccCCCHHHHHHHHHHHHHHhCCCCEEEecCCcc
Confidence 779998888777654421 389999999864
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Probab=98.53 E-value=2.6e-07 Score=72.06 Aligned_cols=77 Identities=14% Similarity=-0.035 Sum_probs=53.2
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC---------CCCCCceeEEEeeCCCH----HHHHHHH
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW---------FPTALVDRYITFDALDP----TDTALKL 76 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~---------~~~~~~~~~i~~Dl~d~----~~~~~~~ 76 (211)
.++|||||++.||++++++|+ ++|++|++++|+.++.. ....... .+..|+.+. +.+.+.+
T Consensus 2 ~vAlVTGas~GIG~aia~~la-----~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 75 (266)
T d1mxha_ 2 PAAVITGGARRIGHSIAVRLH-----QQGFRVVVHYRHSEGAAQRLVAELNAARAGSAV-LCKGDLSLSSSLLDCCEDII 75 (266)
T ss_dssp CEEEETTCSSHHHHHHHHHHH-----HTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEE-EEECCCSSSTTHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEECCchHHHHHHHHHHHhhcCCceE-EEecccccchhHHHHHHHHH
Confidence 468999999999999999999 79999999999865310 0123444 556666543 3333333
Q ss_pred ----HhcccccceEEeecccC
Q 028258 77 ----SLISQEITNLFWVPLQV 93 (211)
Q Consensus 77 ----~~~~~~~~~v~~~a~~~ 93 (211)
+... .+|.++|+|+..
T Consensus 76 ~~~~~~~g-~iDilvnnAG~~ 95 (266)
T d1mxha_ 76 DCSFRAFG-RCDVLVNNASAY 95 (266)
T ss_dssp HHHHHHHS-CCCEEEECCCCC
T ss_pred HHHHHHhC-CCCEEEECCccC
Confidence 2332 389999999863
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=98.47 E-value=3.7e-07 Score=73.90 Aligned_cols=116 Identities=17% Similarity=0.095 Sum_probs=71.8
Q ss_pred CCeEEEEc--CCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC-----------CC-----CC---CCCceeEEE----
Q 028258 9 KSVALIIG--VTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP-----------GW-----FP---TALVDRYIT---- 63 (211)
Q Consensus 9 ~~~ilVtG--atG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~-----------~~-----~~---~~~~~~~i~---- 63 (211)
.|++|||| ++..||+++++.|. ++|.+|++..|.... .. .. ..... ...
T Consensus 2 ~kVAlITGaa~s~GIG~aiA~~la-----~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 75 (329)
T d1uh5a_ 2 EDICFIAGIGDTNGYGWGIAKELS-----KRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILD-MLPFDAS 75 (329)
T ss_dssp CCEEEEECCSSSSSHHHHHHHHHH-----HTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEE-EEECCTT
T ss_pred CcEEEEeCCCCCChHHHHHHHHHH-----HcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhh-cccccce
Confidence 48999999 56799999999999 799999987664220 00 00 01111 222
Q ss_pred ----------------eeCCCHHHHHHHHHhcc---cccceEEeecccCC-----------chhHHHHhhcHHHHHHHHH
Q 028258 64 ----------------FDALDPTDTALKLSLIS---QEITNLFWVPLQVQ-----------ESEEVNIFKNSTMLKNVLS 113 (211)
Q Consensus 64 ----------------~Dl~d~~~~~~~~~~~~---~~~~~v~~~a~~~~-----------~~~~~~~~~n~~~~~~l~~ 113 (211)
+|+.+.+.++..++.+. ..+|+++|+++... .+|...+++|+.++..+.+
T Consensus 76 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k 155 (329)
T d1uh5a_ 76 FDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCK 155 (329)
T ss_dssp CSSGGGCCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred ehhhcccchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHH
Confidence 35555544444433221 13899999887422 1455677889888888888
Q ss_pred HHHhcCCCCCCceEEEEeec
Q 028258 114 VLVSSNSGRSRLRHVALLTG 133 (211)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~s~ 133 (211)
++...+. .-.+++.+|+
T Consensus 156 ~~~~~m~---~~GsIv~iss 172 (329)
T d1uh5a_ 156 YFVNIMK---PQSSIISLTY 172 (329)
T ss_dssp HHGGGEE---EEEEEEEEEC
T ss_pred HHHhhcc---ccccccccee
Confidence 8776641 1245555554
|
| >d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Saccharopine reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=97.88 E-value=1.3e-05 Score=58.12 Aligned_cols=63 Identities=19% Similarity=0.147 Sum_probs=45.2
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC---CCCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW---FPTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~---~~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
.|+|+|.|| |++|+++++.|. +.||+|++++|+..+.. ....... ....+..+.......+..
T Consensus 2 ~K~IliiGa-G~~G~~~a~~L~-----~~g~~V~v~dr~~~~a~~l~~~~~~~~-~~~~~~~~~~~~~~~i~~ 67 (182)
T d1e5qa1 2 TKSVLMLGS-GFVTRPTLDVLT-----DSGIKVTVACRTLESAKKLSAGVQHST-PISLDVNDDAALDAEVAK 67 (182)
T ss_dssp CCEEEEECC-STTHHHHHHHHH-----TTTCEEEEEESCHHHHHHHHTTCTTEE-EEECCTTCHHHHHHHHTT
T ss_pred CCEEEEECC-CHHHHHHHHHHH-----hCCCEEEEEECChHHHHHHHhcccccc-cccccccchhhhHhhhhc
Confidence 589999986 999999999999 68999999999876421 1123333 444566666666666654
|
| >d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=97.88 E-value=2.9e-05 Score=55.12 Aligned_cols=97 Identities=15% Similarity=0.088 Sum_probs=64.9
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCC--cEEEEEeCCCCCCC---CCCC-CceeEEEeeCCCHHHHHHHHHhcccccc
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSP--WKVYGAARRPPPGW---FPTA-LVDRYITFDALDPTDTALKLSLISQEIT 84 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g--~~V~~~~R~~~~~~---~~~~-~~~~~i~~Dl~d~~~~~~~~~~~~~~~~ 84 (211)
+|.|+||+|.+|++++..|.. ++ -++..++.++.+.. ..+. .+. ....-+ ...+..+.+++ .|
T Consensus 2 Kv~IiGA~G~VG~~~A~~l~~-----~~~~~elvLiDi~~~~~~a~Dl~~~~~~~-~~~~~~-~~~~~~~~~~~----aD 70 (144)
T d1mlda1 2 KVAVLGASGGIGQPLSLLLKN-----SPLVSRLTLYDIAHTPGVAADLSHIETRA-TVKGYL-GPEQLPDCLKG----CD 70 (144)
T ss_dssp EEEEETTTSTTHHHHHHHHHT-----CTTCSEEEEEESSSHHHHHHHHTTSSSSC-EEEEEE-SGGGHHHHHTT----CS
T ss_pred eEEEECCCChHHHHHHHHHHh-----CCccceEEEEeccccchhhHHHhhhhhhc-CCCeEE-cCCChHHHhCC----CC
Confidence 689999999999999999983 44 34888887543210 1111 111 222222 33445566676 57
Q ss_pred eEEeecccCC---chhHHHHhhcHHHHHHHHHHHHhc
Q 028258 85 NLFWVPLQVQ---ESEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 85 ~v~~~a~~~~---~~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
+|+.+++... .+..+....|...++.+++.+.++
T Consensus 71 ivVitag~~~~~g~sR~~ll~~N~~i~~~i~~~i~~~ 107 (144)
T d1mlda1 71 VVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQH 107 (144)
T ss_dssp EEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHH
T ss_pred EEEECCCcCCCCCCCcchHHHHHHHHHHHHHHHHHhc
Confidence 7888887643 245567788999999999999988
|
| >d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=97.75 E-value=5.5e-05 Score=53.82 Aligned_cols=97 Identities=19% Similarity=0.139 Sum_probs=65.4
Q ss_pred ccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCC--cEEEEEeCCCCCC-----------CCCCCCceeEEEeeCCCHH
Q 028258 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSP--WKVYGAARRPPPG-----------WFPTALVDRYITFDALDPT 70 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g--~~V~~~~R~~~~~-----------~~~~~~~~~~i~~Dl~d~~ 70 (211)
|..+.+++|.|+|| |.+|++++..|+. .+ -++..+++++... .+...... ....|. +
T Consensus 1 m~~~~~~KI~IiGa-G~vG~~~a~~l~~-----~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~-~~~~d~---~ 70 (148)
T d1ldna1 1 MKNNGGARVVVIGA-GFVGASYVFALMN-----QGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVD-IWHGDY---D 70 (148)
T ss_dssp CTTTTSCEEEEECC-SHHHHHHHHHHHH-----HTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCE-EEECCG---G
T ss_pred CCCCCCCeEEEECc-CHHHHHHHHHHHh-----cCCCceEEEEeeccccccchhccHhhCccccCCCeE-EEECCH---H
Confidence 44555678999996 9999999999983 43 4688899876431 11123333 333443 2
Q ss_pred HHHHHHHhcccccceEEeecccCCc---hhHHHHhhcHHHHHHHHHHHHhc
Q 028258 71 DTALKLSLISQEITNLFWVPLQVQE---SEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 71 ~~~~~~~~~~~~~~~v~~~a~~~~~---~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
+ +++ .|.|+.+++.... +..+....|....+.+.+.+.++
T Consensus 71 ~----l~d----aDvvvitag~~~~~~~~R~dl~~~N~~i~~~i~~~i~~~ 113 (148)
T d1ldna1 71 D----CRD----ADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMAS 113 (148)
T ss_dssp G----TTT----CSEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHH
T ss_pred H----hcc----ceeEEEecccccccCcchhHHHHHHHHHHHHHHHHHHhh
Confidence 1 333 5778888876442 34466788999999999999888
|
| >d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: MJ0490, lactate/malate dehydrogenase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=97.72 E-value=0.00025 Score=50.12 Aligned_cols=94 Identities=12% Similarity=-0.044 Sum_probs=62.0
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCC--cEEEEEeCCCCC--C-----------CCCCCCceeEEEeeCCCHHHHHHH
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSP--WKVYGAARRPPP--G-----------WFPTALVDRYITFDALDPTDTALK 75 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g--~~V~~~~R~~~~--~-----------~~~~~~~~~~i~~Dl~d~~~~~~~ 75 (211)
+|.|+||+|.+|+.++..|+ .++ -++..+++++.. . .......+ ....--.|.+ .
T Consensus 2 KV~IiGA~G~VG~~~a~~l~-----~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~-~~~~~~~d~~----~ 71 (145)
T d1hyea1 2 KVTIIGASGRVGSATALLLA-----KEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDAN-IYVESDENLR----I 71 (145)
T ss_dssp EEEEETTTSHHHHHHHHHHH-----TCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCE-EEEEETTCGG----G
T ss_pred EEEEECCCChHHHHHHHHHH-----hCCcccccccccchhhhHhhhcccccchhcccccccCCc-cccCCcchHH----H
Confidence 58999999999999999998 355 478888886531 0 01112233 2111111221 2
Q ss_pred HHhcccccceEEeecccCC---chhHHHHhhcHHHHHHHHHHHHhc
Q 028258 76 LSLISQEITNLFWVPLQVQ---ESEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 76 ~~~~~~~~~~v~~~a~~~~---~~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
+++ .|+|+.+|+... .+..+....|....+.+++.+.+.
T Consensus 72 l~~----aDvVVitAG~~~~~g~sR~dl~~~Na~iv~~i~~~i~~~ 113 (145)
T d1hyea1 72 IDE----SDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEI 113 (145)
T ss_dssp GTT----CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hcc----ceEEEEecccccCCCCChhhhhhhhHHHHHHHHHHHhcc
Confidence 333 578888888644 245567889999999999999887
|
| >d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn Mja218 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=97.68 E-value=6.8e-06 Score=57.37 Aligned_cols=59 Identities=15% Similarity=0.013 Sum_probs=47.4
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-C-CCCCceeEEEeeCCCHHHHHHH
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-F-PTALVDRYITFDALDPTDTALK 75 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-~-~~~~~~~~i~~Dl~d~~~~~~~ 75 (211)
++|+|+|+ |.+|+.+++.|. +.|++|++++++++... . ...+.. ++.+|.+|++.+.++
T Consensus 1 M~IvI~G~-G~~G~~la~~L~-----~~g~~v~vid~d~~~~~~~~~~~~~~-vi~Gd~~~~~~l~~~ 61 (132)
T d1lssa_ 1 MYIIIAGI-GRVGYTLAKSLS-----EKGHDIVLIDIDKDICKKASAEIDAL-VINGDCTKIKTLEDA 61 (132)
T ss_dssp CEEEEECC-SHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHCSSE-EEESCTTSHHHHHHT
T ss_pred CEEEEECC-CHHHHHHHHHHH-----HCCCCcceecCChhhhhhhhhhhhhh-hccCcccchhhhhhc
Confidence 36899996 999999999999 68999999999876421 1 123678 899999999887665
|
| >d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO) species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.66 E-value=2.2e-05 Score=57.20 Aligned_cols=35 Identities=26% Similarity=0.242 Sum_probs=31.5
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
+|.|+||+|.+|++|++.|+ +.||+|++.+|++++
T Consensus 2 ki~vigGaG~iG~alA~~la-----~~G~~V~l~~R~~e~ 36 (212)
T d1jaya_ 2 RVALLGGTGNLGKGLALRLA-----TLGHEIVVGSRREEK 36 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHH-----TTTCEEEEEESSHHH
T ss_pred EEEEEeCCcHHHHHHHHHHH-----HCCCEEEEEECCHHH
Confidence 47888989999999999999 799999999998654
|
| >d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn bsu222 species: Bacillus subtilis [TaxId: 1423]
Probab=97.60 E-value=2.4e-05 Score=54.36 Aligned_cols=59 Identities=14% Similarity=0.089 Sum_probs=47.1
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-CCCCCceeEEEeeCCCHHHHHHH
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-FPTALVDRYITFDALDPTDTALK 75 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-~~~~~~~~~i~~Dl~d~~~~~~~ 75 (211)
|+++|.| .|-+|+++++.|. +.|++|++++.++.... ....... .+.+|.++++.+.++
T Consensus 1 k~~iIiG-~G~~G~~la~~L~-----~~g~~vvvid~d~~~~~~~~~~~~~-~~~gd~~~~~~l~~a 60 (134)
T d2hmva1 1 KQFAVIG-LGRFGGSIVKELH-----RMGHEVLAVDINEEKVNAYASYATH-AVIANATEENELLSL 60 (134)
T ss_dssp CCEEEEC-CSHHHHHHHHHHH-----HTTCCCEEEESCHHHHHHTTTTCSE-EEECCTTCTTHHHHH
T ss_pred CEEEEEC-CCHHHHHHHHHHH-----HCCCeEEEecCcHHHHHHHHHhCCc-ceeeecccchhhhcc
Confidence 5678887 5999999999999 69999999998876421 2345567 889999999887665
|
| >d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Lactobacillus pentosus [TaxId: 1589]
Probab=97.58 E-value=6.7e-05 Score=53.27 Aligned_cols=94 Identities=17% Similarity=0.027 Sum_probs=60.1
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCC--cEEEEEeCCCCCCC----------CCCCCceeEEEeeCCCHHHHHH
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSP--WKVYGAARRPPPGW----------FPTALVDRYITFDALDPTDTAL 74 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g--~~V~~~~R~~~~~~----------~~~~~~~~~i~~Dl~d~~~~~~ 74 (211)
..+++|.|+|+ |.+|+.++..|+. .+ .+|.++++++.... ....... ....|+ ++
T Consensus 3 ~~~~KI~IIGa-G~VG~~~A~~l~~-----~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~-~~~~d~---~~--- 69 (146)
T d1ez4a1 3 PNHQKVVLVGD-GAVGSSYAFAMAQ-----QGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKK-IYSGEY---SD--- 69 (146)
T ss_dssp TTBCEEEEECC-SHHHHHHHHHHHH-----HTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCE-EEECCG---GG---
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHh-----cCCCcEEEEeecccchhHHHHHHHhccccccCCce-EeeccH---HH---
Confidence 34568999995 9999999999983 44 57999998764210 0112223 444443 21
Q ss_pred HHHhcccccceEEeecccCCc---hhHHHHhhcHHHHHHHHHHHHhc
Q 028258 75 KLSLISQEITNLFWVPLQVQE---SEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 75 ~~~~~~~~~~~v~~~a~~~~~---~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
+++ .|.|+.+++.... +..+....|....+.+.+.+.+.
T Consensus 70 -~~~----adivvitag~~~~~g~~r~~l~~~N~~i~~~~~~~i~~~ 111 (146)
T d1ez4a1 70 -CKD----ADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDS 111 (146)
T ss_dssp -GTT----CSEEEECCCC----------CHHHHHHHHHHHHHHHHHT
T ss_pred -hcc----ccEEEEecccccCCCCCHHHHHHHHHHHHHHHHHHHhhc
Confidence 333 5788888876442 33456688999999999999887
|
| >d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Haemophilus influenzae [TaxId: 727]
Probab=97.57 E-value=4.5e-05 Score=54.21 Aligned_cols=41 Identities=20% Similarity=0.156 Sum_probs=34.8
Q ss_pred ccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
|+.+| ++|.|+|+.|.+|+.+++.|. +.||+|.+++|++..
T Consensus 5 ~~~~~-~kI~iIGg~G~mG~~la~~L~-----~~G~~V~~~d~~~~~ 45 (152)
T d2pv7a2 5 INSDI-HKIVIVGGYGKLGGLFARYLR-----ASGYPISILDREDWA 45 (152)
T ss_dssp SCTTC-CCEEEETTTSHHHHHHHHHHH-----TTTCCEEEECTTCGG
T ss_pred cCCCC-CeEEEEcCCCHHHHHHHHHHH-----HcCCCcEeccccccc
Confidence 34444 678999999999999999999 699999999998654
|
| >d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=97.54 E-value=8.4e-05 Score=52.74 Aligned_cols=36 Identities=14% Similarity=0.122 Sum_probs=26.5
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCc---EEEEEeCCCC
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPW---KVYGAARRPP 49 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~---~V~~~~R~~~ 49 (211)
|+|.|.||||++|+.+++.|++ +..| +++.++++..
T Consensus 2 kkVaIvGATG~VGqeli~~Ll~----~~~~p~~~l~~~~ss~s 40 (146)
T d1t4ba1 2 QNVGFIGWRGMVGSVLMQRMVE----ERDFDAIRPVFFSTSQL 40 (146)
T ss_dssp CEEEEESTTSHHHHHHHHHHHH----TTGGGGSEEEEEESSST
T ss_pred cEEEEECCccHHHHHHHHHHHh----CCCCCeeEEEEeecccc
Confidence 5789999999999999998773 3333 3666666544
|
| >d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]
Probab=97.49 E-value=0.0005 Score=50.04 Aligned_cols=99 Identities=9% Similarity=-0.004 Sum_probs=60.7
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCC--CCCcEEEEEeCCCCCC-------C---CCCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTP--GSPWKVYGAARRPPPG-------W---FPTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~--~~g~~V~~~~R~~~~~-------~---~~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
+|.|+||+|.||++++-.|++.... .....+..++...... . ...+... .+..- ++ ..+.+++
T Consensus 26 kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~-~~~~~-~~---~~~~~~~ 100 (175)
T d7mdha1 26 NIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLR-EVSIG-ID---PYEVFED 100 (175)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEE-EEEEE-SC---HHHHTTT
T ss_pred EEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhccccccccc-Ccccc-cc---chhhccC
Confidence 6999999999999999999842110 1122455555443210 0 0112222 22111 12 2344555
Q ss_pred cccccceEEeecccCC---chhHHHHhhcHHHHHHHHHHHHhc
Q 028258 79 ISQEITNLFWVPLQVQ---ESEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 79 ~~~~~~~v~~~a~~~~---~~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
.|+|+.+++... .+..+....|....+.+.+++.+.
T Consensus 101 ----aDvVvi~ag~~rkpg~tR~Dll~~N~~I~k~~~~~i~~~ 139 (175)
T d7mdha1 101 ----VDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAV 139 (175)
T ss_dssp ----CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ----CceEEEeeccCCCCCCcHHHHHHHHHHHHHHHHHHHHhh
Confidence 577888887754 256677888999999999999987
|
| >d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Clostridium thermocellum [TaxId: 1515]
Probab=97.42 E-value=0.00063 Score=47.77 Aligned_cols=94 Identities=14% Similarity=0.025 Sum_probs=57.6
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----CCC-----CCceeEEEeeCCCHHHHHHHHHh
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----FPT-----ALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----~~~-----~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
+++|.|+|| |.+|+.++..|+.. .-.-++..+++++.... +.+ .... ...+|. + .+++
T Consensus 1 r~KI~IIGa-G~VG~~~a~~l~~~---~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~-~~~~~~---~----~~~~ 68 (142)
T d1y6ja1 1 RSKVAIIGA-GFVGASAAFTMALR---QTANELVLIDVFKEKAIGEAMDINHGLPFMGQMS-LYAGDY---S----DVKD 68 (142)
T ss_dssp CCCEEEECC-SHHHHHHHHHHHHT---TCSSEEEEECCC---CCHHHHHHTTSCCCTTCEE-EC--CG---G----GGTT
T ss_pred CCeEEEECC-CHHHHHHHHHHHhc---CCCCEEEEEeccCCccceeeeeeccCcccCCCee-EeeCcH---H----HhCC
Confidence 357888897 99999999998831 12347999998776421 011 1222 222221 1 2333
Q ss_pred cccccceEEeecccCCc---hhHHHHhhcHHHHHHHHHHHHhc
Q 028258 79 ISQEITNLFWVPLQVQE---SEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 79 ~~~~~~~v~~~a~~~~~---~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
.|.|+.+++.... +..+....|....+.+++.+.+.
T Consensus 69 ----adivvitag~~~~~~~~r~~l~~~N~~i~~~i~~~i~~~ 107 (142)
T d1y6ja1 69 ----CDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKY 107 (142)
T ss_dssp ----CSEEEECCCC------CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ----CceEEEecccccCcCcchhHHhhHHHHHHHHHHHHhhcc
Confidence 5778888876432 44566788999999999999987
|
| >d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=97.33 E-value=0.0004 Score=49.41 Aligned_cols=100 Identities=11% Similarity=-0.000 Sum_probs=58.0
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCC--CCcEEEEEeCCCC--CC--------CCCCCCceeEEEeeCCCHHHHHHHHH
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPG--SPWKVYGAARRPP--PG--------WFPTALVDRYITFDALDPTDTALKLS 77 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~--~g~~V~~~~R~~~--~~--------~~~~~~~~~~i~~Dl~d~~~~~~~~~ 77 (211)
.+|.|+||+|++|++++..|++..--. .......+.-... .. ........ .+...-. ..+.++
T Consensus 5 ~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~----~~~~~~ 79 (154)
T d1y7ta1 5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLA-GLEATDD----PKVAFK 79 (154)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEE-EEEEESC----HHHHTT
T ss_pred CEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhcccccccc-ccccCCc----hhhhcc
Confidence 489999999999999999998411100 0111222221111 10 00112233 3333322 223455
Q ss_pred hcccccceEEeecccCCc---hhHHHHhhcHHHHHHHHHHHHhc
Q 028258 78 LISQEITNLFWVPLQVQE---SEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 78 ~~~~~~~~v~~~a~~~~~---~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
+ .|+|+.+++.... +..+....|....+.+.+.+.+.
T Consensus 80 ~----advViitaG~~~~pg~~r~dl~~~N~~i~~~~~~~i~k~ 119 (154)
T d1y7ta1 80 D----ADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEV 119 (154)
T ss_dssp T----CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred c----ccEEEeecCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence 5 5778888887542 45567788999999999999886
|
| >d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Toxoplasma gondii [TaxId: 5811]
Probab=97.29 E-value=0.0012 Score=46.98 Aligned_cols=99 Identities=9% Similarity=-0.049 Sum_probs=61.0
Q ss_pred CCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCC-cEEEEEeCCCCCCC-----CCC----CCceeEEEeeCCCHHHHHHH
Q 028258 6 QNPKSVALIIGVTGISGLSLAEALKNPTTPGSP-WKVYGAARRPPPGW-----FPT----ALVDRYITFDALDPTDTALK 75 (211)
Q Consensus 6 ~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g-~~V~~~~R~~~~~~-----~~~----~~~~~~i~~Dl~d~~~~~~~ 75 (211)
+.++++|.|+|| |.+|+.++..|.. .+ .++.+++.++.... +.+ ......+..+- + .++.
T Consensus 4 ~~k~~KI~IIGa-G~VG~~lA~~l~~-----~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~-~---~~~~ 73 (154)
T d1pzga1 4 VQRRKKVAMIGS-GMIGGTMGYLCAL-----RELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEY-S---YEAA 73 (154)
T ss_dssp CSCCCEEEEECC-SHHHHHHHHHHHH-----HTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEEC-S---HHHH
T ss_pred ccCCCcEEEECC-CHHHHHHHHHHHh-----CCCceEEEEEeccccchhHHHHHhhhccccCCeeEEeccC-c---hhhh
Confidence 334678999997 9999999988773 44 37888887765311 000 01110111111 1 2344
Q ss_pred HHhcccccceEEeecccCCc--------hhHHHHhhcHHHHHHHHHHHHhc
Q 028258 76 LSLISQEITNLFWVPLQVQE--------SEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 76 ~~~~~~~~~~v~~~a~~~~~--------~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
+++ .|.|+.+++.... +..+....|...++.+++.+.+.
T Consensus 74 ~~~----adiVvitag~~~~~g~~~~~~tR~~l~~~n~~iv~~i~~~i~~~ 120 (154)
T d1pzga1 74 LTG----ADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKY 120 (154)
T ss_dssp HTT----CSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHH
T ss_pred hcC----CCeEEEecccccCCCCCCcccchhhhhhhhHHHHHHHHHHHHhc
Confidence 555 4677777765331 33456678999999999999888
|
| >d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.28 E-value=0.00038 Score=49.95 Aligned_cols=98 Identities=9% Similarity=0.007 Sum_probs=61.5
Q ss_pred cccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCC--cEEEEEeCCCCCC----------CCCCCCceeEE-EeeCCCH
Q 028258 3 KQDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSP--WKVYGAARRPPPG----------WFPTALVDRYI-TFDALDP 69 (211)
Q Consensus 3 ~~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g--~~V~~~~R~~~~~----------~~~~~~~~~~i-~~Dl~d~ 69 (211)
++..+.+.+|.|+|| |.+|++++..|+. .+ .++..+++++... ....+.-. .+ ..|.
T Consensus 13 ~~~~~~~~KI~IIGa-G~VG~~~A~~l~~-----~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~-~~~~~d~--- 82 (159)
T d2ldxa1 13 PEDKLSRCKITVVGV-GDVGMACAISILL-----KGLADELALVDADTDKLRGEALDLQHGSLFLSTPK-IVFGKDY--- 82 (159)
T ss_dssp SCCCCCCCEEEEECC-SHHHHHHHHHHHT-----TTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCE-EEEESSG---
T ss_pred ccccCCCCeEEEECC-CHHHHHHHHHHHh-----cCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCe-EEeccch---
Confidence 444555668999996 9999999999983 44 3688898875421 00111112 22 2233
Q ss_pred HHHHHHHHhcccccceEEeecccCCc---hhHHHHhhcHHHHHHHHHHHHhc
Q 028258 70 TDTALKLSLISQEITNLFWVPLQVQE---SEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 70 ~~~~~~~~~~~~~~~~v~~~a~~~~~---~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
++ +++ .|.|+.+++.... +..+..+.|....+.+.+.+.+.
T Consensus 83 ~~----~~~----adivvitag~~~~~~~~R~dll~~N~~i~~~i~~~i~~~ 126 (159)
T d2ldxa1 83 NV----SAN----SKLVIITAGARMVSGQTRLDLLQRNVAIMKAIVPGVIQN 126 (159)
T ss_dssp GG----GTT----EEEEEECCSCCCCTTTCSSCTTHHHHHHHHHHTTTHHHH
T ss_pred hh----hcc----ccEEEEecccccCCCCCHHHHHHHHHHHHHHHHHHHhcc
Confidence 21 233 5677777776442 33345677998888888888877
|
| >d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=97.26 E-value=8.5e-05 Score=46.80 Aligned_cols=38 Identities=16% Similarity=0.251 Sum_probs=33.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
...++||+||+|.+|...++.+. ..|++|+++++++++
T Consensus 31 ~~~~vlI~gasGgVG~~aiQlak-----~~G~~Vi~~t~s~~k 68 (77)
T d1o8ca2 31 QDGEIVVTGASGGVGSTAVALLH-----KLGYQVVAVSGREST 68 (77)
T ss_dssp GGCEEEESSTTSHHHHHHHHHHH-----HTTCCEEEEESCGGG
T ss_pred CCCcEEEEeCCCcHHHHHHHHHH-----HcCCeEEEEECCHHH
Confidence 35689999999999999999887 689999999988654
|
| >d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=97.20 E-value=0.0022 Score=45.00 Aligned_cols=98 Identities=14% Similarity=-0.002 Sum_probs=61.0
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC----CCCCC--CceeEEEeeCCCHHHHHHHHHhcccccc
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG----WFPTA--LVDRYITFDALDPTDTALKLSLISQEIT 84 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~----~~~~~--~~~~~i~~Dl~d~~~~~~~~~~~~~~~~ 84 (211)
+|.|+||+|.+|++++..|... .....++..++..+... .+.+. .........-.+. +.+++ .|
T Consensus 2 KV~IiGaaG~VG~~~a~~l~~~--~~~~~el~L~D~~~~~~g~a~Dl~h~~~~~~~~~~~~~~~~----~~~~~----aD 71 (145)
T d2cmda1 2 KVAVLGAAGGIGQALALLLKTQ--LPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDAT----PALEG----AD 71 (145)
T ss_dssp EEEEETTTSHHHHHHHHHHHHH--SCTTCEEEEECSSTTHHHHHHHHHTSCSSCEEEEECSSCCH----HHHTT----CS
T ss_pred EEEEEcCCChHHHHHHHHHHhC--CCCCcEEEEecccccchhHHHHHHCCccccCCcEEEcCCCc----cccCC----CC
Confidence 6899999999999999887520 02346788888754210 01111 1110111122222 23555 57
Q ss_pred eEEeecccCCc---hhHHHHhhcHHHHHHHHHHHHhc
Q 028258 85 NLFWVPLQVQE---SEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 85 ~v~~~a~~~~~---~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
+|+.+++.... +..+....|...++.+.+.+.+.
T Consensus 72 vvvitaG~~~k~g~~R~dl~~~N~~i~~~v~~~i~~~ 108 (145)
T d2cmda1 72 VVLISAGVRRKPGMDRSDLFNVNAGIVKNLVQQVAKT 108 (145)
T ss_dssp EEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHH
T ss_pred EEEECCCccCCCCcchhhHHHHHHHHHHHHHHHHHhh
Confidence 88888886532 44567788999999999999988
|
| >d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase species: Guinea pig (Cavia porcellus) [TaxId: 10141]
Probab=97.17 E-value=4.9e-05 Score=55.71 Aligned_cols=77 Identities=18% Similarity=0.039 Sum_probs=49.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-CCCCCceeEEEeeCCCHHHHHHHHHhcc-cccce
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-FPTALVDRYITFDALDPTDTALKLSLIS-QEITN 85 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-~~~~~~~~~i~~Dl~d~~~~~~~~~~~~-~~~~~ 85 (211)
.+.+|||+||+|.+|+..++... ..|.+|++++|++++.. ....+.. .+ .|..+.+..+..++... ..+|+
T Consensus 29 ~G~~VlV~ga~ggvG~~aiqlak-----~~Ga~vi~~~~~~~~~~~~~~~Ga~-~v-i~~~~~~~~~~~~~~~~~~Gvd~ 101 (182)
T d1v3va2 29 GGETVLVSAAAGAVGSVVGQIAK-----LKGCKVVGAAGSDEKIAYLKQIGFD-AA-FNYKTVNSLEEALKKASPDGYDC 101 (182)
T ss_dssp SSCEEEESSTTSHHHHHHHHHHH-----HTTCEEEEEESSHHHHHHHHHTTCS-EE-EETTSCSCHHHHHHHHCTTCEEE
T ss_pred CCCEEEEEeCCCchhHHHHHHHH-----ccCCEEEEeCCCHHHHHHHHhhhhh-hh-cccccccHHHHHHHHhhcCCCce
Confidence 35789999999999999999888 68999999998765421 1112233 22 44444433333322211 12888
Q ss_pred EEeecc
Q 028258 86 LFWVPL 91 (211)
Q Consensus 86 v~~~a~ 91 (211)
|+.+.+
T Consensus 102 v~D~vG 107 (182)
T d1v3va2 102 YFDNVG 107 (182)
T ss_dssp EEESSC
T ss_pred eEEecC
Confidence 888775
|
| >d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.09 E-value=0.00011 Score=53.31 Aligned_cols=77 Identities=13% Similarity=0.096 Sum_probs=49.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-CCCCCceeEEEeeCCCHHHHHHHHHhcc-cccce
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-FPTALVDRYITFDALDPTDTALKLSLIS-QEITN 85 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-~~~~~~~~~i~~Dl~d~~~~~~~~~~~~-~~~~~ 85 (211)
.+.+|||+||+|.+|...++.+. ..|.+|+++++++.+.. ...-+.. . ..|..+.+..++..+... ..+|+
T Consensus 28 ~g~~VlV~Ga~G~vG~~aiq~a~-----~~G~~vi~~~~~~~~~~~~~~~Ga~-~-vi~~~~~~~~~~i~~~t~~~g~d~ 100 (174)
T d1yb5a2 28 AGESVLVHGASGGVGLAACQIAR-----AYGLKILGTAGTEEGQKIVLQNGAH-E-VFNHREVNYIDKIKKYVGEKGIDI 100 (174)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHH-----HTTCEEEEEESSHHHHHHHHHTTCS-E-EEETTSTTHHHHHHHHHCTTCEEE
T ss_pred CCCEEEEEecccccccccccccc-----ccCcccccccccccccccccccCcc-c-ccccccccHHHHhhhhhccCCceE
Confidence 46789999999999999999888 68999999998765321 1112233 2 246666543333322211 12788
Q ss_pred EEeecc
Q 028258 86 LFWVPL 91 (211)
Q Consensus 86 v~~~a~ 91 (211)
++.+.+
T Consensus 101 v~d~~g 106 (174)
T d1yb5a2 101 IIEMLA 106 (174)
T ss_dssp EEESCH
T ss_pred Eeeccc
Confidence 877664
|
| >d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Glycinamide ribonucleotide transformylase PurT, N-domain species: Escherichia coli [TaxId: 562]
Probab=97.08 E-value=0.0023 Score=42.86 Aligned_cols=67 Identities=13% Similarity=0.071 Sum_probs=51.9
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccceE
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITNL 86 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v 86 (211)
.+|.|.| +|.+|+-++.... +-|+++++++.+++... ..-.-+ ++.+|+.|.+.+.+...... +|+|
T Consensus 12 ~kigIlG-gGQL~rMla~aA~-----~lG~~v~v~d~~~~~PA-~~va~~-~i~~~~~d~~~l~~~~~~~~--~Dvi 78 (111)
T d1kjqa2 12 TRVMLLG-SGELGKEVAIECQ-----RLGVEVIAVDRYADAPA-MHVAHR-SHVINMLDGDALRRVVELEK--PHYI 78 (111)
T ss_dssp CEEEEES-CSHHHHHHHHHHH-----TTTCEEEEEESSTTCGG-GGGSSE-EEECCTTCHHHHHHHHHHHC--CSEE
T ss_pred CEEEEEe-CCHHHHHHHHHHH-----HCCCEEEEEcCCCCCch-hhcCCe-EEECCCCCHHHHHHHHHhhC--CceE
Confidence 5799998 8999999999999 68999999998776421 111225 78899999999888776543 5665
|
| >d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Haloarcula marismortui [TaxId: 2238]
Probab=97.05 E-value=0.0014 Score=45.96 Aligned_cols=93 Identities=9% Similarity=-0.080 Sum_probs=60.3
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC--CCC----------CCCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP--PGW----------FPTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~--~~~----------~~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
+|.|+||+|.+|++++..|+.. .-.-++..++.... ..+ ....... ....|. ++ +++
T Consensus 2 KV~IiGaaG~VG~~~A~~l~~~---~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~-i~~~~~---~~----~~~ 70 (142)
T d1o6za1 2 KVSVVGAAGTVGAAAGYNIALR---DIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTR-VRQGGY---ED----TAG 70 (142)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT---TCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCE-EEECCG---GG----GTT
T ss_pred eEEEECCCCcHHHHHHHHHHhC---CCCCEEEEEecCCcccccceeecchhhcccccCCce-EeeCCH---HH----hhh
Confidence 6899999999999999999831 12235777775321 100 0122333 333433 22 333
Q ss_pred cccccceEEeecccCC---chhHHHHhhcHHHHHHHHHHHHhc
Q 028258 79 ISQEITNLFWVPLQVQ---ESEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 79 ~~~~~~~v~~~a~~~~---~~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
.|+|+.+|+.+. .+..+..+.|....+.+.+.+.+.
T Consensus 71 ----aDiVvitaG~~~~~g~~R~dl~~~N~~I~~~i~~~i~~~ 109 (142)
T d1o6za1 71 ----SDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEH 109 (142)
T ss_dssp ----CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred ----cCEEEEecccccccCCchhhHHHHHHHHHHHHHHHHHhc
Confidence 577888887643 245567889999999999999987
|
| >d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=96.93 E-value=0.0013 Score=46.55 Aligned_cols=101 Identities=14% Similarity=0.070 Sum_probs=58.5
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCC--CCCcEEEEEeCCCCCCC----------CCCCCceeEEEeeCCCHHHHHHHH
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTP--GSPWKVYGAARRPPPGW----------FPTALVDRYITFDALDPTDTALKL 76 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~--~~g~~V~~~~R~~~~~~----------~~~~~~~~~i~~Dl~d~~~~~~~~ 76 (211)
+.+|.|+||+|.+|++++..|++...- ....++..++.+..... ....... .+..-- + ..+.+
T Consensus 3 p~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~-~---~~~~~ 77 (154)
T d5mdha1 3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLK-DVIATD-K---EEIAF 77 (154)
T ss_dssp CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEE-EEEEES-C---HHHHT
T ss_pred ceEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhccccccccc-ccccCc-c---ccccc
Confidence 458999999999999999999831110 11123444544332100 0012222 222211 1 22334
Q ss_pred HhcccccceEEeecccCCc---hhHHHHhhcHHHHHHHHHHHHhc
Q 028258 77 SLISQEITNLFWVPLQVQE---SEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 77 ~~~~~~~~~v~~~a~~~~~---~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
++ .|+|+.+++.... +..+..+.|....+.+.+.+.+.
T Consensus 78 ~~----~dvVVitag~~~~~g~sr~dll~~N~~i~k~~~~~i~k~ 118 (154)
T d5mdha1 78 KD----LDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKY 118 (154)
T ss_dssp TT----CSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHH
T ss_pred CC----ceEEEEecccCCCCCCchhHHHHHhHHHHHHHHHHHHhh
Confidence 44 5778888876543 34456788999999999998876
|
| >d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Vibrio cholerae [TaxId: 666]
Probab=96.91 E-value=0.00098 Score=47.02 Aligned_cols=21 Identities=19% Similarity=0.341 Sum_probs=19.0
Q ss_pred eEEEEcCCChHHHHHHHHhhC
Q 028258 11 VALIIGVTGISGLSLAEALKN 31 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~ 31 (211)
+|.|.||||++|+.+++.|++
T Consensus 2 KVaIiGATGyvG~eLi~lLl~ 22 (147)
T d1mb4a1 2 RVGLVGWRGMVGSVLMQRMVE 22 (147)
T ss_dssp EEEEESCSSHHHHHHHHHHHH
T ss_pred EEEEECCccHHHHHHHHHHHh
Confidence 589999999999999998873
|
| >d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]
Probab=96.91 E-value=0.0015 Score=46.64 Aligned_cols=93 Identities=14% Similarity=0.092 Sum_probs=61.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCc--EEEEEeCCCCCCC-----CC-----CCCceeEE-EeeCCCHHHHHH
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPW--KVYGAARRPPPGW-----FP-----TALVDRYI-TFDALDPTDTAL 74 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~--~V~~~~R~~~~~~-----~~-----~~~~~~~i-~~Dl~d~~~~~~ 74 (211)
++++|.|+|+ |.+|+.++..|+ .+|. ++..++++++... +. ..... .+ ..|+ ++
T Consensus 19 ~~~KV~IIGa-G~VG~~~A~~l~-----~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~-~~~~~d~---~~--- 85 (160)
T d1i0za1 19 PNNKITVVGV-GQVGMACAISIL-----GKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPK-IVADKDY---SV--- 85 (160)
T ss_dssp CSSEEEEECC-SHHHHHHHHHHH-----HTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSE-EEECSSG---GG---
T ss_pred CCCeEEEECC-CHHHHHHHHHHH-----hcCCCcEEEEEEeccchhHHHHHHHhccccccCCCe-EEeccch---hh---
Confidence 4678999996 999999999998 3544 6888888654310 00 01112 11 2222 21
Q ss_pred HHHhcccccceEEeecccCCc---hhHHHHhhcHHHHHHHHHHHHhc
Q 028258 75 KLSLISQEITNLFWVPLQVQE---SEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 75 ~~~~~~~~~~~v~~~a~~~~~---~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
+++ .|.|+.+|+.... +..+....|....+.++..+.+.
T Consensus 86 -~~~----adiVVitAg~~~~~g~tR~~l~~~N~~i~~~i~~~i~~~ 127 (160)
T d1i0za1 86 -TAN----SKIVVVTAGVRQQEGESRLNLVQRNVNVFKFIIPQIVKY 127 (160)
T ss_dssp -GTT----CSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHH
T ss_pred -ccc----ccEEEEecCCccccCcchHHHHHHHHHHHHHHHHHHHhc
Confidence 333 5778888887542 44556788999999999999887
|
| >d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Probab=96.89 E-value=0.00025 Score=51.30 Aligned_cols=73 Identities=14% Similarity=0.087 Sum_probs=48.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCC-CCCCceeEEEeeCCCHHHHHHHHHhcccccceE
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF-PTALVDRYITFDALDPTDTALKLSLISQEITNL 86 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~-~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v 86 (211)
.+++|||+||+|.+|...++.+. ..|.+|+++++++.+... ..-+.+ . ..|..+. .+.+..... +|+|
T Consensus 27 ~g~~VlI~ga~G~vG~~aiqlak-----~~G~~vi~~~~~~~~~~~~~~lGa~-~-~i~~~~~---~~~~~~~~g-~D~v 95 (171)
T d1iz0a2 27 PGEKVLVQAAAGALGTAAVQVAR-----AMGLRVLAAASRPEKLALPLALGAE-E-AATYAEV---PERAKAWGG-LDLV 95 (171)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHH-----HTTCEEEEEESSGGGSHHHHHTTCS-E-EEEGGGH---HHHHHHTTS-EEEE
T ss_pred CCCEEEEEeccccchhhhhhhhc-----ccccccccccccccccccccccccc-e-eeehhhh---hhhhhcccc-cccc
Confidence 45789999999999999999888 689999999987664321 112333 2 2344432 222333222 7888
Q ss_pred Eeecc
Q 028258 87 FWVPL 91 (211)
Q Consensus 87 ~~~a~ 91 (211)
|.+.+
T Consensus 96 ~d~~G 100 (171)
T d1iz0a2 96 LEVRG 100 (171)
T ss_dssp EECSC
T ss_pred ccccc
Confidence 88765
|
| >d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative enoyl reductase domain of polyketide synthase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=96.81 E-value=0.00022 Score=51.87 Aligned_cols=76 Identities=17% Similarity=0.073 Sum_probs=49.5
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-CCCCCceeEEEeeCCCHHHHHHHHHhcc-cccceE
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-FPTALVDRYITFDALDPTDTALKLSLIS-QEITNL 86 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-~~~~~~~~~i~~Dl~d~~~~~~~~~~~~-~~~~~v 86 (211)
+++|||+||+|.+|...++.+. ..|.+|+++++++++.. ....+.. . ..|..+++-.++..+... ..+|++
T Consensus 26 g~~VlI~ga~g~vG~~~iqla~-----~~g~~vi~~~~~~~~~~~l~~~Ga~-~-vi~~~~~~~~~~v~~~t~~~g~d~v 98 (183)
T d1pqwa_ 26 GERVLIHSATGGVGMAAVSIAK-----MIGARIYTTAGSDAKREMLSRLGVE-Y-VGDSRSVDFADEILELTDGYGVDVV 98 (183)
T ss_dssp TCEEEETTTTSHHHHHHHHHHH-----HHTCEEEEEESSHHHHHHHHTTCCS-E-EEETTCSTHHHHHHHHTTTCCEEEE
T ss_pred CCEEEEECCCCCcccccchhhc-----cccccceeeeccccccccccccccc-c-cccCCccCHHHHHHHHhCCCCEEEE
Confidence 5789999999999999999887 68999999988765321 1123333 3 245555543333322111 127888
Q ss_pred Eeecc
Q 028258 87 FWVPL 91 (211)
Q Consensus 87 ~~~a~ 91 (211)
+.+.+
T Consensus 99 ~d~~g 103 (183)
T d1pqwa_ 99 LNSLA 103 (183)
T ss_dssp EECCC
T ss_pred Eeccc
Confidence 88776
|
| >d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Ketopantoate reductase PanE species: Escherichia coli [TaxId: 562]
Probab=96.79 E-value=0.00069 Score=48.05 Aligned_cols=35 Identities=29% Similarity=0.331 Sum_probs=31.3
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
++|+|+|+ |.+|+.++..|. +.|++|.+++|++..
T Consensus 1 MkI~IiGa-G~iG~~~a~~L~-----~~G~~V~~~~r~~~~ 35 (167)
T d1ks9a2 1 MKITVLGC-GALGQLWLTALC-----KQGHEVQGWLRVPQP 35 (167)
T ss_dssp CEEEEECC-SHHHHHHHHHHH-----HTTCEEEEECSSCCS
T ss_pred CEEEEECc-CHHHHHHHHHHH-----HCCCceEEEEcCHHH
Confidence 36899996 999999999999 699999999998764
|
| >d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Putative semialdehyde dehydrogenase species: Rice (Oryza sativa) [TaxId: 4530]
Probab=96.79 E-value=0.001 Score=48.68 Aligned_cols=35 Identities=14% Similarity=0.331 Sum_probs=28.3
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCC
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~ 47 (211)
+-+|.|.||||++|+.+++.|.+ +..+++..+..+
T Consensus 5 kikVaIlGATGyvG~elirLL~~----HP~~ei~~l~S~ 39 (183)
T d2cvoa1 5 EVRIAVLGASGYTGAEIVRLLAN----HPQFRIKVMTAD 39 (183)
T ss_dssp CEEEEEESCSSHHHHHHHHHHTT----CSSEEEEEEECS
T ss_pred ccEEEEECcccHHHHHHHHHHHh----CCCceEEEEecc
Confidence 34699999999999999999995 566777766543
|
| >d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) species: Escherichia coli [TaxId: 562]
Probab=96.78 E-value=0.0069 Score=45.48 Aligned_cols=78 Identities=12% Similarity=0.085 Sum_probs=52.5
Q ss_pred CCCCCeEEEEc----------------CCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCH
Q 028258 6 QNPKSVALIIG----------------VTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDP 69 (211)
Q Consensus 6 ~~~~~~ilVtG----------------atG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~ 69 (211)
+..+++||||+ .||..|.+|++++. ..|++|+.+.-..... ....+. .+ .+...
T Consensus 3 dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~-----~~Ga~V~li~g~~~~~--~p~~~~-~~--~~~t~ 72 (223)
T d1u7za_ 3 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAA-----RRGANVTLVSGPVSLP--TPPFVK-RV--DVMTA 72 (223)
T ss_dssp TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHH-----HTTCEEEEEECSCCCC--CCTTEE-EE--ECCSH
T ss_pred ccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHH-----HcCCchhhhhcccccC--cccccc-cc--eehhh
Confidence 44578999998 48999999999999 7999999887644422 124555 44 34444
Q ss_pred HHHHHHH-HhcccccceEEeecccCC
Q 028258 70 TDTALKL-SLISQEITNLFWVPLQVQ 94 (211)
Q Consensus 70 ~~~~~~~-~~~~~~~~~v~~~a~~~~ 94 (211)
++..+.+ +.++. .|.+|++|+...
T Consensus 73 ~~m~~~~~~~~~~-~D~~i~aAAvsD 97 (223)
T d1u7za_ 73 LEMEAAVNASVQQ-QNIFIGCAAVAD 97 (223)
T ss_dssp HHHHHHHHHHGGG-CSEEEECCBCCS
T ss_pred HHHHHHHHhhhcc-ceeEeeeechhh
Confidence 4443433 33333 788888887644
|
| >d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]
Probab=96.77 E-value=0.0033 Score=43.99 Aligned_cols=94 Identities=18% Similarity=0.042 Sum_probs=60.3
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----C-----CCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----F-----PTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----~-----~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
.+|.|+|| |.+|++++..|+.. .-.-++..+++++.... + ...... .... .+.++ +++
T Consensus 2 ~Ki~IIGa-G~VG~~~a~~l~~~---~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~-i~~~--~~~~~----~~d- 69 (143)
T d1llda1 2 TKLAVIGA-GAVGSTLAFAAAQR---GIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVS-IDGS--DDPEI----CRD- 69 (143)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHT---TCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCE-EEEE--SCGGG----GTT-
T ss_pred CEEEEECC-CHHHHHHHHHHHhc---CCCcEEEEEEeccccchhHHHHHHhccccCCCce-eecC--CCHHH----hhC-
Confidence 57889996 99999999998731 22246888888764310 0 012222 2222 12111 333
Q ss_pred ccccceEEeecccCC---chhHHHHhhcHHHHHHHHHHHHhc
Q 028258 80 SQEITNLFWVPLQVQ---ESEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 80 ~~~~~~v~~~a~~~~---~~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
.|.|+.+++... .+..+....|....+.+.+.+.+.
T Consensus 70 ---aDvVVitaG~~~~~g~~R~dl~~~N~~i~~~i~~~i~~~ 108 (143)
T d1llda1 70 ---ADMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKV 108 (143)
T ss_dssp ---CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---CcEEEEecccccCCCCchhhhhhhhHHHHHHHHHHHHhh
Confidence 577888888754 245567788999999999999887
|
| >d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Probab=96.76 E-value=0.00026 Score=51.65 Aligned_cols=76 Identities=13% Similarity=0.056 Sum_probs=46.1
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCC-CCCCceeEEEeeCCCHHHHHHHHHhcc-cccceE
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF-PTALVDRYITFDALDPTDTALKLSLIS-QEITNL 86 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~-~~~~~~~~i~~Dl~d~~~~~~~~~~~~-~~~~~v 86 (211)
+.+|||+||+|.+|+..++.+. ..|.+|+++.+++.+... ..-+....+ |..+. ..+..+... ..+|+|
T Consensus 32 g~~VLI~gaaGGVG~~aiQlak-----~~Ga~Viat~~s~~k~~~~~~lGa~~vi--~~~~~--~~~~~~~~~~~gvD~v 102 (176)
T d1xa0a2 32 RGPVLVTGATGGVGSLAVSMLA-----KRGYTVEASTGKAAEHDYLRVLGAKEVL--AREDV--MAERIRPLDKQRWAAA 102 (176)
T ss_dssp GCCEEESSTTSHHHHHHHHHHH-----HTTCCEEEEESCTTCHHHHHHTTCSEEE--ECC-----------CCSCCEEEE
T ss_pred CCEEEEEeccchHHHHHHHHHH-----HcCCceEEecCchHHHHHHHhcccceee--ecchh--HHHHHHHhhccCcCEE
Confidence 4689999999999999999888 689999999998776321 112222022 43332 122222221 138888
Q ss_pred EeecccC
Q 028258 87 FWVPLQV 93 (211)
Q Consensus 87 ~~~a~~~ 93 (211)
+.+.+..
T Consensus 103 id~vgg~ 109 (176)
T d1xa0a2 103 VDPVGGR 109 (176)
T ss_dssp EECSTTT
T ss_pred EEcCCch
Confidence 8777643
|
| >d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chloroflexus aurantiacus [TaxId: 1108]
Probab=96.76 E-value=0.0014 Score=45.85 Aligned_cols=93 Identities=16% Similarity=0.003 Sum_probs=57.5
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----C------CCCCceeEE-EeeCCCHHHHHHHH
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----F------PTALVDRYI-TFDALDPTDTALKL 76 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----~------~~~~~~~~i-~~Dl~d~~~~~~~~ 76 (211)
+++|.|+|+ |.+|+.++..|+. ..-.++..++.+++... + ...... +. ..|..+ +
T Consensus 1 r~KI~IIGa-G~VG~~~A~~l~~----~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~-i~~~~d~~~-------~ 67 (142)
T d1uxja1 1 RKKISIIGA-GFVGSTTAHWLAA----KELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVR-VTGTNNYAD-------T 67 (142)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHH----HTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCC-EEEESCGGG-------G
T ss_pred CCeEEEECC-CHHHHHHHHHHHh----CCcceEEEEeeccccchhHHHHhhccccccCCCCE-EEecCcHHH-------h
Confidence 468999996 9999999999884 22247888888765311 0 011222 22 223322 2
Q ss_pred HhcccccceEEeecccCCc---hhHHHHhhcHHHHHHHHHHHHhc
Q 028258 77 SLISQEITNLFWVPLQVQE---SEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 77 ~~~~~~~~~v~~~a~~~~~---~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
++ .|.|+.+++.... +..+....|....+.+++.+.+.
T Consensus 68 ~~----advvvitag~~~~~~~~r~dl~~~N~~i~~~i~~~i~k~ 108 (142)
T d1uxja1 68 AN----SDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPL 108 (142)
T ss_dssp TT----CSEEEECCSCC---------CHHHHHHHHHHHHHHHGGG
T ss_pred cC----CCEEEEeeeccCCcCcchhHHHhHHHHHHHHHHHHHhcc
Confidence 32 5778888876432 33455688999999999999987
|
| >d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH species: Lactobacillus confusus [TaxId: 1583]
Probab=96.76 E-value=0.0014 Score=46.12 Aligned_cols=93 Identities=17% Similarity=0.023 Sum_probs=57.7
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----------CCCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----------FPTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----------~~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
|+|.|+|| |.+|+.++..|+.. .-..++..+++++.+.. ....... ....| .++ +++
T Consensus 2 kKI~IIGa-G~VG~~~a~~l~~~---~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~-~~~~d---~~~----l~~ 69 (146)
T d1hyha1 2 RKIGIIGL-GNVGAAVAHGLIAQ---GVADDYVFIDANEAKVKADQIDFQDAMANLEAHGN-IVIND---WAA----LAD 69 (146)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHH---TCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCE-EEESC---GGG----GTT
T ss_pred CeEEEECc-CHHHHHHHHHHHhc---CCCceEEEEecccchhhhHHHhhhccccccCCccc-eeccC---HHH----hcc
Confidence 78899995 99999999988831 12247888887655310 0112222 22223 222 333
Q ss_pred cccccceEEeecccCCc-------hhHHHHhhcHHHHHHHHHHHHhc
Q 028258 79 ISQEITNLFWVPLQVQE-------SEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 79 ~~~~~~~v~~~a~~~~~-------~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
.|.|+.+++.... +..+....|...++.+.+.+.+.
T Consensus 70 ----adiVVitaG~~~~~~~~~g~~R~~l~~~N~~i~~~i~~~i~~~ 112 (146)
T d1hyha1 70 ----ADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKES 112 (146)
T ss_dssp ----CSEEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHT
T ss_pred ----ccEEEEeccccccccccCCccHHHHHHHHHHHHHHHHHHHhhc
Confidence 5778888875431 22234677999999999999887
|
| >d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chlorobium vibrioforme [TaxId: 1098]
Probab=96.63 E-value=0.0064 Score=42.22 Aligned_cols=91 Identities=14% Similarity=0.012 Sum_probs=60.1
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCC--cEEEEEeCCCCCCC-----C------CCCCceeEEEeeCCCHHHHHHHHH
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSP--WKVYGAARRPPPGW-----F------PTALVDRYITFDALDPTDTALKLS 77 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g--~~V~~~~R~~~~~~-----~------~~~~~~~~i~~Dl~d~~~~~~~~~ 77 (211)
+|.|+|| |.+|++++..|+. .+ .++..+++++.... . .....+ +... .|.++ ++
T Consensus 2 KI~IIGa-G~VG~~la~~l~~-----~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~-i~~~--~~~~~----~~ 68 (142)
T d1guza1 2 KITVIGA-GNVGATTAFRLAE-----KQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTK-VTGS--NDYAD----TA 68 (142)
T ss_dssp EEEEECC-SHHHHHHHHHHHH-----TTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCE-EEEE--SCGGG----GT
T ss_pred EEEEECc-CHHHHHHHHHHHh-----CCCCceEEEeccccccchhhhhhhhcccchhcccce-EEec--CCHHH----hc
Confidence 5888896 9999999999983 43 47999998776411 0 012223 2222 22222 33
Q ss_pred hcccccceEEeecccCC---chhHHHHhhcHHHHHHHHHHHHhc
Q 028258 78 LISQEITNLFWVPLQVQ---ESEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 78 ~~~~~~~~v~~~a~~~~---~~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
+ .|.++.+++... .+..+....|...++.+.+.+.+.
T Consensus 69 d----advvvitag~~~~~g~~r~~l~~~N~~i~~~i~~~i~~~ 108 (142)
T d1guza1 69 N----SDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKH 108 (142)
T ss_dssp T----CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred C----CeEEEEEEecCCCCCCchHHHHHHHHHHHHHHHHHhhcc
Confidence 3 577888887643 245566788999999999999887
|
| >d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Short chain L-3-hydroxyacyl CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.61 E-value=0.00092 Score=49.26 Aligned_cols=37 Identities=16% Similarity=0.154 Sum_probs=33.0
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
||=|+|.|.|| |.+|+.++..++ ..||+|++++++++
T Consensus 2 ~~IkkvaViGa-G~mG~~iA~~~a-----~~G~~V~l~D~~~~ 38 (192)
T d1f0ya2 2 IIVKHVTVIGG-GLMGAGIAQVAA-----ATGHTVVLVDQTED 38 (192)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHH-----HTTCEEEEECSCHH
T ss_pred ceeEEEEEECc-CHHHHHHHHHHH-----hCCCcEEEEECChH
Confidence 55689999995 999999999999 69999999999865
|
| >d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Salmonella typhimurium [TaxId: 90371]
Probab=96.59 E-value=0.00088 Score=48.71 Aligned_cols=32 Identities=19% Similarity=0.328 Sum_probs=26.7
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEe
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAA 45 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~ 45 (211)
.+|.|.||||++|+.|++.|.+ +..++|..+.
T Consensus 2 ikVaIiGATGyvG~eLlrlL~~----HP~~ei~~l~ 33 (179)
T d2g17a1 2 LNTLIVGASGYAGAELVSYVNR----HPHMTITALT 33 (179)
T ss_dssp EEEEEETTTSHHHHHHHHHHHH----CTTEEEEEEE
T ss_pred cEEEEECcccHHHHHHHHHHHh----CCCCceEeeE
Confidence 5799999999999999999985 4578876553
|
| >d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Probab=96.58 E-value=0.00023 Score=51.55 Aligned_cols=76 Identities=14% Similarity=0.022 Sum_probs=49.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCC-CCCCceeEEEeeCCCHHHHHHHHHhcc--cccc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF-PTALVDRYITFDALDPTDTALKLSLIS--QEIT 84 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~-~~~~~~~~i~~Dl~d~~~~~~~~~~~~--~~~~ 84 (211)
.+++|||+||+|.+|..+++.+. ..|.+|+++++++.+... ..-+.+ . ..|..+++-.++ +..+. ..+|
T Consensus 28 ~g~~Vlv~ga~g~vG~~~iqlak-----~~Ga~Vi~~~~s~~k~~~~~~lGa~-~-vi~~~~~d~~~~-v~~~t~g~g~d 99 (179)
T d1qora2 28 PDEQFLFHAAAGGVGLIACQWAK-----ALGAKLIGTVGTAQKAQSALKAGAW-Q-VINYREEDLVER-LKEITGGKKVR 99 (179)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHH-----HHTCEEEEEESSHHHHHHHHHHTCS-E-EEETTTSCHHHH-HHHHTTTCCEE
T ss_pred CCCEEEEEccccccchHHHHHHH-----HhCCeEeecccchHHHHHHHhcCCe-E-EEECCCCCHHHH-HHHHhCCCCeE
Confidence 35799999999999999999888 689999999998765211 112223 2 347766543333 32221 1267
Q ss_pred eEEeecc
Q 028258 85 NLFWVPL 91 (211)
Q Consensus 85 ~v~~~a~ 91 (211)
+++.+.+
T Consensus 100 ~v~d~~g 106 (179)
T d1qora2 100 VVYDSVG 106 (179)
T ss_dssp EEEECSC
T ss_pred EEEeCcc
Confidence 7777765
|
| >d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Thermotoga maritima [TaxId: 2336]
Probab=96.56 E-value=0.0012 Score=47.93 Aligned_cols=36 Identities=39% Similarity=0.377 Sum_probs=28.8
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
.+|.|.||||++|+.+++.|.+ ....++..+..+..
T Consensus 2 ikVaIvGATGyvG~eLirlL~~----HP~~ei~~l~s~~~ 37 (176)
T d1vkna1 2 IRAGIIGATGYTGLELVRLLKN----HPEAKITYLSSRTY 37 (176)
T ss_dssp EEEEEESTTSHHHHHHHHHHHH----CTTEEEEEEECSTT
T ss_pred eEEEEECCCcHHHHHHHHHHHh----CCCceEEEeecccc
Confidence 4699999999999999999985 56678777654433
|
| >d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD species: Escherichia coli [TaxId: 562]
Probab=96.55 E-value=0.005 Score=39.50 Aligned_cols=71 Identities=18% Similarity=0.051 Sum_probs=48.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC--CCCCCceeEEEeeCCCHHHHHHHHHhcccccce
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW--FPTALVDRYITFDALDPTDTALKLSLISQEITN 85 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~--~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~ 85 (211)
.+|+|+|.|. |..|.++++.|. +.|++|++.+.+..... ....... +...... .. .+.+ +|.
T Consensus 4 ~~K~v~ViGl-G~sG~s~a~~L~-----~~g~~v~~~D~~~~~~~~~~~~~~~~-~~~~~~~-~~----~~~~----~d~ 67 (93)
T d2jfga1 4 QGKNVVIIGL-GLTGLSCVDFFL-----ARGVTPRVMDTRMTPPGLDKLPEAVE-RHTGSLN-DE----WLMA----ADL 67 (93)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHH-----HTTCCCEEEESSSSCTTGGGSCTTSC-EEESBCC-HH----HHHH----CSE
T ss_pred CCCEEEEEeE-CHHHHHHHHHHH-----HCCCEEEEeeCCcCchhHHHHhhccc-eeecccc-hh----hhcc----CCE
Confidence 4688999995 889999999999 68999999998765322 1123444 4444432 22 2333 577
Q ss_pred EEeecccCC
Q 028258 86 LFWVPLQVQ 94 (211)
Q Consensus 86 v~~~a~~~~ 94 (211)
|+...+.+.
T Consensus 68 vi~SPGi~~ 76 (93)
T d2jfga1 68 IVASPGIAL 76 (93)
T ss_dssp EEECTTSCT
T ss_pred EEECCCCCC
Confidence 777777654
|
| >d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: D-aminoacid oxidase, N-terminal domain domain: D-aminoacid oxidase, N-terminal domain species: Rhodotorula gracilis [TaxId: 5286]
Probab=96.51 E-value=0.0017 Score=48.64 Aligned_cols=40 Identities=28% Similarity=0.350 Sum_probs=34.4
Q ss_pred ccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
|+|..+|+|+|+| .|..|...+.+|. ++|++|+++.|...
T Consensus 1 ~~~~~~~kVvVIG-aGiaGl~~A~~L~-----~~G~~V~vier~~~ 40 (268)
T d1c0pa1 1 LMMHSQKRVVVLG-SGVIGLSSALILA-----RKGYSVHILARDLP 40 (268)
T ss_dssp CCCCCSCEEEEEC-CSHHHHHHHHHHH-----HTTCEEEEEESSCT
T ss_pred CCCCCCCcEEEEC-ccHHHHHHHHHHH-----HCCCCEEEEeCCCC
Confidence 4555678899998 8999999999999 68999999998653
|
| >d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Putative shikimate dehydrogenase YdiB species: Escherichia coli [TaxId: 562]
Probab=96.48 E-value=0.0038 Score=45.26 Aligned_cols=73 Identities=12% Similarity=-0.070 Sum_probs=52.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCc-EEEEEeCCCCCCC--------C-CCCCceeEEEeeCCCHHHHHHHHH
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRPPPGW--------F-PTALVDRYITFDALDPTDTALKLS 77 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~-~V~~~~R~~~~~~--------~-~~~~~~~~i~~Dl~d~~~~~~~~~ 77 (211)
.+|+|+|+| +|+.|++++..|.+ .|. +++++.|+++... + ..-... ....|+.+.+.+.+.+.
T Consensus 17 ~~k~vlIlG-aGGaarai~~al~~-----~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 89 (182)
T d1vi2a1 17 KGKTMVLLG-AGGASTAIGAQGAI-----EGLKEIKLFNRRDEFFDKALAFAQRVNENTDCV-VTVTDLADQQAFAEALA 89 (182)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHH-----TTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCE-EEEEETTCHHHHHHHHH
T ss_pred CCCEEEEEC-CcHHHHHHHHHHhh-----cCCceEeeeccchHHHHHHHHHHHHHHhhcCcc-eEeeecccccchhhhhc
Confidence 468999999 58999999999994 554 5888999876421 0 012233 45789999888777766
Q ss_pred hcccccceEEeecc
Q 028258 78 LISQEITNLFWVPL 91 (211)
Q Consensus 78 ~~~~~~~~v~~~a~ 91 (211)
. .|.||++.-
T Consensus 90 ~----~diiIN~Tp 99 (182)
T d1vi2a1 90 S----ADILTNGTK 99 (182)
T ss_dssp T----CSEEEECSS
T ss_pred c----cceeccccC
Confidence 5 688888864
|
| >d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhfP species: Bacillus subtilis [TaxId: 1423]
Probab=96.46 E-value=0.00095 Score=48.07 Aligned_cols=37 Identities=22% Similarity=0.250 Sum_probs=32.7
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
+..|||+||+|.+|...++... ..|.+|++++|++++
T Consensus 24 ~~~VLV~gaaGgVG~~avQlAk-----~~Ga~Viat~~s~~k 60 (167)
T d1tt7a2 24 KGSVLVTGATGGVGGIAVSMLN-----KRGYDVVASTGNREA 60 (167)
T ss_dssp GCCEEEESTTSHHHHHHHHHHH-----HHTCCEEEEESSSST
T ss_pred CCEEEEeCCcchHHHHHHHHHH-----HcCCceEEEecCHHH
Confidence 3479999999999999998877 689999999998775
|
| >d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamyl tRNA-reductase middle domain species: Archaeon Methanopyrus kandleri [TaxId: 2320]
Probab=96.39 E-value=0.00039 Score=49.79 Aligned_cols=71 Identities=14% Similarity=0.057 Sum_probs=47.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCc-EEEEEeCCCCCCC-C-CCCCceeEEEeeCCCHHHHHHHHHhcccccc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRPPPGW-F-PTALVDRYITFDALDPTDTALKLSLISQEIT 84 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~-~V~~~~R~~~~~~-~-~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~ 84 (211)
..+++||+|+ |-+|+.+++.|. ..|+ +|+++.|+..+.. + ..-+.+ + .+ .+++.+.+.. .|
T Consensus 23 ~~~~ilviGa-G~~g~~v~~~L~-----~~g~~~i~v~nRt~~ka~~l~~~~~~~-~--~~---~~~~~~~l~~----~D 86 (159)
T d1gpja2 23 HDKTVLVVGA-GEMGKTVAKSLV-----DRGVRAVLVANRTYERAVELARDLGGE-A--VR---FDELVDHLAR----SD 86 (159)
T ss_dssp TTCEEEEESC-CHHHHHHHHHHH-----HHCCSEEEEECSSHHHHHHHHHHHTCE-E--CC---GGGHHHHHHT----CS
T ss_pred ccCeEEEECC-CHHHHHHHHHHH-----hcCCcEEEEEcCcHHHHHHHHHhhhcc-c--cc---chhHHHHhcc----CC
Confidence 4688999996 999999999999 5776 5888888755321 0 011223 2 22 3456666665 67
Q ss_pred eEEeecccCC
Q 028258 85 NLFWVPLQVQ 94 (211)
Q Consensus 85 ~v~~~a~~~~ 94 (211)
.||.+.+...
T Consensus 87 ivi~atss~~ 96 (159)
T d1gpja2 87 VVVSATAAPH 96 (159)
T ss_dssp EEEECCSSSS
T ss_pred EEEEecCCCC
Confidence 8888876543
|
| >d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=96.37 E-value=0.0023 Score=44.40 Aligned_cols=77 Identities=12% Similarity=0.153 Sum_probs=48.2
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEE-EeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhccc-ccceEEe
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYG-AARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQ-EITNLFW 88 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~-~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~-~~~~v~~ 88 (211)
+|.|.||+|-.|+.+++.+.+ .+++++.+ +++..........+.. +..|++.|+.+.+.++.+.. .+-.|+-
T Consensus 1 kI~v~Ga~GrMG~~i~~~i~~----~~~~~l~~~~d~~~~~~~~~~~~~D--vvIDFS~p~~~~~~~~~~~~~~~~~ViG 74 (135)
T d1yl7a1 1 RVGVLGAKGKVGATMVRAVAA----ADDLTLSAELDAGDPLSLLTDGNTE--VVIDFTHPDVVMGNLEFLIDNGIHAVVG 74 (135)
T ss_dssp EEEEETTTSHHHHHHHHHHHH----STTSEEEEEECTTCCTHHHHTTTCS--EEEECCCTTTHHHHHHHHHHTTCEEEEC
T ss_pred CEEEECCCCHHHHHHHHHHHh----CCCCEEEEEEecCCchhhhccccCC--EEEEcccHHHHHHHHHHHHhcCCCEEEe
Confidence 589999999999999999875 67888654 5554332111112333 46899999877666554321 1444544
Q ss_pred ecccC
Q 028258 89 VPLQV 93 (211)
Q Consensus 89 ~a~~~ 93 (211)
..|..
T Consensus 75 TTG~~ 79 (135)
T d1yl7a1 75 TTGFT 79 (135)
T ss_dssp CCCCC
T ss_pred ccccc
Confidence 44433
|
| >d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Usg-1 protein homolog PA3116 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=96.35 E-value=0.0032 Score=44.09 Aligned_cols=39 Identities=18% Similarity=0.130 Sum_probs=27.8
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
+.+|.|.||||++|+.+++.|.+.. ....++..+..+..
T Consensus 2 ~mnVaIvGATGyvG~eli~lL~~~~--hP~~~l~~~~s~~~ 40 (144)
T d2hjsa1 2 PLNVAVVGATGSVGEALVGLLDERD--FPLHRLHLLASAES 40 (144)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTT--CCCSCEEEEECTTT
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcC--CCceEEEEEeeccc
Confidence 4579999999999999999996200 23456776655443
|
| >d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Rck domain from putative potassium channel Kch species: Escherichia coli [TaxId: 562]
Probab=96.34 E-value=0.0013 Score=46.35 Aligned_cols=72 Identities=15% Similarity=0.052 Sum_probs=52.0
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC-----CCCCCCceeEEEeeCCCHHHHHHHHHhccccc
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-----WFPTALVDRYITFDALDPTDTALKLSLISQEI 83 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~-----~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~ 83 (211)
+-+++|.| .|-+|+.+++.|. +.|++|+++..+++.. .....++. ++.+|.+|++.+.++ +++. .
T Consensus 3 knHiII~G-~g~~g~~l~~~L~-----~~~~~v~vId~d~~~~~~~~~~~~~~~~~-vi~Gd~~d~~~L~~a--~i~~-a 72 (153)
T d1id1a_ 3 KDHFIVCG-HSILAINTILQLN-----QRGQNVTVISNLPEDDIKQLEQRLGDNAD-VIPGDSNDSSVLKKA--GIDR-C 72 (153)
T ss_dssp CSCEEEEC-CSHHHHHHHHHHH-----HTTCCEEEEECCCHHHHHHHHHHHCTTCE-EEESCTTSHHHHHHH--TTTT-C
T ss_pred CCEEEEEC-CCHHHHHHHHHHH-----HcCCCEEEEeccchhHHHHHHHhhcCCcE-EEEccCcchHHHHHh--cccc-C
Confidence 34689998 5899999999999 6899999998876421 01236788 999999999876665 2222 4
Q ss_pred ceEEeec
Q 028258 84 TNLFWVP 90 (211)
Q Consensus 84 ~~v~~~a 90 (211)
+.++.+.
T Consensus 73 ~~vi~~~ 79 (153)
T d1id1a_ 73 RAILALS 79 (153)
T ss_dssp SEEEECS
T ss_pred CEEEEcc
Confidence 5665443
|
| >d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=96.33 E-value=0.005 Score=42.76 Aligned_cols=92 Identities=17% Similarity=0.013 Sum_probs=59.7
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC----------CCCCCceeEEEeeCCCHHHHHHHHHhcc
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW----------FPTALVDRYITFDALDPTDTALKLSLIS 80 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~----------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~ 80 (211)
+|.|+|| |.+|+.++..|+.. .-.-++..+++++.... ....... ....|. ++ +++
T Consensus 2 KI~IIGa-G~VG~~~a~~l~~~---~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~-~~~~~~---~~----~~~-- 67 (140)
T d1a5za1 2 KIGIVGL-GRVGSSTAFALLMK---GFAREMVLIDVDKKRAEGDALDLIHGTPFTRRAN-IYAGDY---AD----LKG-- 67 (140)
T ss_dssp EEEEECC-SHHHHHHHHHHHHH---TCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCE-EEECCG---GG----GTT--
T ss_pred EEEEECc-CHHHHHHHHHHHhC---CCCCEEEEEecccccccchhcccccccccccccc-ccCCcH---HH----hcC--
Confidence 6788896 99999999988731 22346888887654310 0012333 333332 21 344
Q ss_pred cccceEEeecccCCc---hhHHHHhhcHHHHHHHHHHHHhc
Q 028258 81 QEITNLFWVPLQVQE---SEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 81 ~~~~~v~~~a~~~~~---~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
.|+|+.+++.... +..+....|....+.+.+.+.+.
T Consensus 68 --adivvitag~~~~~g~~r~dl~~~N~~I~~~i~~~i~~~ 106 (140)
T d1a5za1 68 --SDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKY 106 (140)
T ss_dssp --CSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --CCEEEEecccccCCCcchhhhhccccchHHHHHHHHHhc
Confidence 5778888876432 44566788999999999999988
|
| >d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=96.32 E-value=0.0047 Score=42.30 Aligned_cols=72 Identities=11% Similarity=0.104 Sum_probs=47.0
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEE-EEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhccc-ccceEEe
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVY-GAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQ-EITNLFW 88 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~-~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~-~~~~v~~ 88 (211)
+|.|.|++|-.|+.|.+.+. ++++++. .++++.... + .... +..|++.|+.+.+.++-+.. .+-.|+-
T Consensus 2 ki~i~G~~GrMG~~i~~~~~-----~~~~~l~~~id~~~~~~-~--~~~D--VvIDFS~p~~~~~~l~~~~~~~~p~ViG 71 (128)
T d1vm6a3 2 KYGIVGYSGRMGQEIQKVFS-----EKGHELVLKVDVNGVEE-L--DSPD--VVIDFSSPEALPKTVDLCKKYRAGLVLG 71 (128)
T ss_dssp EEEEETTTSHHHHHHHHHHH-----HTTCEEEEEEETTEEEE-C--SCCS--EEEECSCGGGHHHHHHHHHHHTCEEEEC
T ss_pred EEEEECCCCHHHHHHHHHHh-----cCCCeEEEEECCCcHHH-h--ccCC--EEEEecCHHHHHHHHHHHHhcCCCEEEE
Confidence 58999999999999998887 6888865 455543321 1 2233 35799999887766654321 1445544
Q ss_pred eccc
Q 028258 89 VPLQ 92 (211)
Q Consensus 89 ~a~~ 92 (211)
..|.
T Consensus 72 TTG~ 75 (128)
T d1vm6a3 72 TTAL 75 (128)
T ss_dssp CCSC
T ss_pred cCCC
Confidence 4443
|
| >d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=96.19 E-value=0.0014 Score=47.55 Aligned_cols=36 Identities=17% Similarity=0.262 Sum_probs=32.5
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
.++||+||+|.+|+..++... ..|.+|++++|++.+
T Consensus 33 ~~vlV~gasGGVG~~aiQlAk-----~~Ga~Via~~~~~~k 68 (177)
T d1o89a2 33 GEIVVTGASGGVGSTAVALLH-----KLGYQVVAVSGREST 68 (177)
T ss_dssp CEEEESSTTSHHHHHHHHHHH-----HTTCCEEEEESCGGG
T ss_pred CcEEEEEccccchHHHHHHHH-----HcCCCeEEEecchhH
Confidence 489999999999999999888 689999999998765
|
| >d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.04 E-value=0.0035 Score=44.27 Aligned_cols=22 Identities=23% Similarity=0.477 Sum_probs=19.9
Q ss_pred CeEEEEcCCChHHHHHHHHhhC
Q 028258 10 SVALIIGVTGISGLSLAEALKN 31 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~ 31 (211)
-+|.|.||||++|+.|++.|.+
T Consensus 2 ~kVaIvGATGyvG~eLirlL~~ 23 (154)
T d2gz1a1 2 YTVAVVGATGAVGAQMIKMLEE 23 (154)
T ss_dssp EEEEEETTTSHHHHHHHHHHHT
T ss_pred CEEEEECCCcHHHHHHHHHHHc
Confidence 3789999999999999999984
|
| >d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=96.00 E-value=0.0033 Score=44.62 Aligned_cols=33 Identities=27% Similarity=0.419 Sum_probs=29.2
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
+|.|+| .|.+|+.+++.|. +.||+|++++|++.
T Consensus 2 kI~iIG-~G~mG~~lA~~l~-----~~g~~V~~~d~~~~ 34 (165)
T d2f1ka2 2 KIGVVG-LGLIGASLAGDLR-----RRGHYLIGVSRQQS 34 (165)
T ss_dssp EEEEEC-CSHHHHHHHHHHH-----HTTCEEEEECSCHH
T ss_pred EEEEEe-ecHHHHHHHHHHH-----HCCCEEEEEECCch
Confidence 488887 6999999999999 69999999999754
|
| >d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=96.00 E-value=0.023 Score=39.75 Aligned_cols=94 Identities=10% Similarity=-0.013 Sum_probs=58.9
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----C------CCCCceeEEEeeCCCHHHHHHHHH
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----F------PTALVDRYITFDALDPTDTALKLS 77 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----~------~~~~~~~~i~~Dl~d~~~~~~~~~ 77 (211)
+.+|.|+|+ |.+|++++..|+. ..=.++..+++++.... . ...... +...+ +.++ ++
T Consensus 3 ~~KI~IIGa-G~VG~~~a~~l~~----~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~-v~~~~--~~~~----~~ 70 (150)
T d1t2da1 3 KAKIVLVGS-GMIGGVMATLIVQ----KNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCK-VSGSN--TYDD----LA 70 (150)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHH----TTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCC-EEEEC--CGGG----GT
T ss_pred CCeEEEECC-CHHHHHHHHHHHh----CCCCeEEEEeccCCcceeeecchhhhccccCCCcE-EEecc--cccc----cC
Confidence 467999995 9999999987774 12236888888765310 0 011222 22221 2111 23
Q ss_pred hcccccceEEeecccCCc--------hhHHHHhhcHHHHHHHHHHHHhc
Q 028258 78 LISQEITNLFWVPLQVQE--------SEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 78 ~~~~~~~~v~~~a~~~~~--------~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
+ .|+|+.+++.... +..+....|....+.+++.+.+.
T Consensus 71 ~----advvvitag~~~~~g~~~~~~~R~~l~~~N~~iv~~i~~~i~~~ 115 (150)
T d1t2da1 71 G----ADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKN 115 (150)
T ss_dssp T----CSEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHH
T ss_pred C----CcEEEEecccccCCCCCccccchhHHHHHHHHHHHHHHHHHHhc
Confidence 3 5778888875432 23455788999999999999988
|
| >d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=95.68 E-value=0.022 Score=39.49 Aligned_cols=92 Identities=11% Similarity=-0.075 Sum_probs=57.6
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----------CCCCCceeEEE-eeCCCHHHHHHHHHh
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----------FPTALVDRYIT-FDALDPTDTALKLSL 78 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----------~~~~~~~~~i~-~Dl~d~~~~~~~~~~ 78 (211)
+|.|+|| |.+|++++..|+.. .---++..+++++...+ ....... ... .|+ + .+++
T Consensus 2 KI~IIGa-G~VG~~~a~~l~~~---~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~-i~~~~d~---~----~~~~ 69 (142)
T d1ojua1 2 KLGFVGA-GRVGSTSAFTCLLN---LDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPK-IVGGADY---S----LLKG 69 (142)
T ss_dssp EEEEECC-SHHHHHHHHHHHHH---SCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCE-EEEESCG---G----GGTT
T ss_pred EEEEECc-CHHHHHHHHHHHhc---CcCceEEEEecccchhhHHHHHHhhhccccCCCCc-cccCCCH---H----Hhcc
Confidence 5788896 99999999988731 11246888887654310 0011112 222 232 1 2333
Q ss_pred cccccceEEeecccCC---chhHHHHhhcHHHHHHHHHHHHhc
Q 028258 79 ISQEITNLFWVPLQVQ---ESEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 79 ~~~~~~~v~~~a~~~~---~~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
.|.|+..++.+. .+..+....|....+.+.+.+.+.
T Consensus 70 ----adiVvitag~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~ 108 (142)
T d1ojua1 70 ----SEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVEN 108 (142)
T ss_dssp ----CSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred ----ccEEEEeccccCCCCCchHHHHHHhhHHHHHHHHHHHhh
Confidence 567777777543 245567788999999999999887
|
| >d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Aquifex aeolicus [TaxId: 63363]
Probab=95.68 E-value=0.0045 Score=44.00 Aligned_cols=34 Identities=38% Similarity=0.649 Sum_probs=28.6
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCc--EEEEEeCCCC
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPW--KVYGAARRPP 49 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~--~V~~~~R~~~ 49 (211)
|+|+|+| .|.+|..+++.|. +.|+ +|++++|++.
T Consensus 2 k~I~IIG-~G~mG~sla~~L~-----~~g~~~~I~~~D~~~~ 37 (171)
T d2g5ca2 2 QNVLIVG-VGFMGGSFAKSLR-----RSGFKGKIYGYDINPE 37 (171)
T ss_dssp CEEEEES-CSHHHHHHHHHHH-----HTTCCSEEEEECSCHH
T ss_pred CEEEEEc-cCHHHHHHHHHHH-----hcCCCeEEEEEECChH
Confidence 5799998 7999999999998 5665 6899998764
|
| >d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase species: Arthrobacter, strain 1c [TaxId: 1663]
Probab=95.66 E-value=0.0045 Score=44.26 Aligned_cols=35 Identities=17% Similarity=0.123 Sum_probs=31.3
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
.|++.|+| .|.+|..++..|. ..||+|++++|++.
T Consensus 1 sk~iaIiG-aG~~G~~~A~~l~-----~~G~~V~~~~r~~~ 35 (184)
T d1bg6a2 1 SKTYAVLG-LGNGGHAFAAYLA-----LKGQSVLAWDIDAQ 35 (184)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHH-----HTTCEEEEECSCHH
T ss_pred CCEEEEEC-ccHHHHHHHHHHH-----HCCCEEEEEECCHH
Confidence 37899999 5999999999999 68999999999754
|
| >d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Haemophilus influenzae [TaxId: 727]
Probab=95.65 E-value=0.0053 Score=39.84 Aligned_cols=77 Identities=13% Similarity=0.065 Sum_probs=44.9
Q ss_pred CccccCCCCCeEEEEcCCChHH-HHHHHHhhCCCCCCCCcEEEEEeCCCCCCC--CCCCCceeEEEeeCCCHHHHHHHHH
Q 028258 1 MEKQDQNPKSVALIIGVTGISG-LSLAEALKNPTTPGSPWKVYGAARRPPPGW--FPTALVDRYITFDALDPTDTALKLS 77 (211)
Q Consensus 1 ~~~~~~~~~~~ilVtGatG~iG-~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~--~~~~~~~~~i~~Dl~d~~~~~~~~~ 77 (211)
|.|+...+ |++.++|. |.+| ++|++.|. ++||+|.+.++...... +...++. +..++-. +. ++
T Consensus 1 ~~~~~~~~-~~ihfiGi-gG~GMs~LA~~L~-----~~G~~VsGSD~~~~~~~~~L~~~Gi~-v~~g~~~--~~----i~ 66 (96)
T d1p3da1 1 IIPEMRRV-QQIHFIGI-GGAGMSGIAEILL-----NEGYQISGSDIADGVVTQRLAQAGAK-IYIGHAE--EH----IE 66 (96)
T ss_dssp CCCCCTTC-CEEEEETT-TSTTHHHHHHHHH-----HHTCEEEEEESCCSHHHHHHHHTTCE-EEESCCG--GG----GT
T ss_pred CCccchhC-CEEEEEEE-CHHHHHHHHHHHH-----hCCCEEEEEeCCCChhhhHHHHCCCe-EEECCcc--cc----CC
Confidence 45555544 66777763 3333 67899999 79999999998755311 1234555 4333221 11 22
Q ss_pred hcccccceEEeecccCCc
Q 028258 78 LISQEITNLFWVPLQVQE 95 (211)
Q Consensus 78 ~~~~~~~~v~~~a~~~~~ 95 (211)
+ +|.|+...+....
T Consensus 67 ~----~d~vV~S~AI~~~ 80 (96)
T d1p3da1 67 G----ASVVVVSSAIKDD 80 (96)
T ss_dssp T----CSEEEECTTSCTT
T ss_pred C----CCEEEECCCcCCC
Confidence 2 5777777766543
|
| >d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Probab=95.64 E-value=0.0025 Score=45.44 Aligned_cols=74 Identities=11% Similarity=0.007 Sum_probs=48.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCC-CCCCceeEEEeeCCCHHHHHHHHHhcccccceE
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF-PTALVDRYITFDALDPTDTALKLSLISQEITNL 86 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~-~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v 86 (211)
.+.+|+|.|+ |.+|...++.+. ..|.+++++++++++... ..-+.. . ..|..+.+......++ +|++
T Consensus 30 ~G~~VlI~Ga-G~vG~~a~qlak-----~~Ga~~i~~~~~~~~~~~a~~lGad-~-~i~~~~~~~~~~~~~~----~D~v 97 (168)
T d1uufa2 30 PGKKVGVVGI-GGLGHMGIKLAH-----AMGAHVVAFTTSEAKREAAKALGAD-E-VVNSRNADEMAAHLKS----FDFI 97 (168)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHH-----HTTCEEEEEESSGGGHHHHHHHTCS-E-EEETTCHHHHHTTTTC----EEEE
T ss_pred CCCEEEEecc-chHHHHHHHHhh-----cccccchhhccchhHHHHHhccCCc-E-EEECchhhHHHHhcCC----Ccee
Confidence 3678999986 899999998887 689998889887664211 112222 2 3566666544333332 7888
Q ss_pred EeecccC
Q 028258 87 FWVPLQV 93 (211)
Q Consensus 87 ~~~a~~~ 93 (211)
+.+.+..
T Consensus 98 id~~g~~ 104 (168)
T d1uufa2 98 LNTVAAP 104 (168)
T ss_dssp EECCSSC
T ss_pred eeeeecc
Confidence 8887644
|
| >d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=95.55 E-value=0.012 Score=39.58 Aligned_cols=37 Identities=27% Similarity=0.234 Sum_probs=32.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
.+|+++|.| +|+||-.++..|. +.|.+|+.+.|++..
T Consensus 22 ~p~~~vIiG-~G~ig~E~A~~l~-----~lG~~Vtii~~~~~~ 58 (122)
T d1v59a2 22 IPKRLTIIG-GGIIGLEMGSVYS-----RLGSKVTVVEFQPQI 58 (122)
T ss_dssp CCSEEEEEC-CSHHHHHHHHHHH-----HTTCEEEEECSSSSS
T ss_pred CCCeEEEEC-CCchHHHHHHHHH-----hhCcceeEEEecccc
Confidence 468999998 8999999999999 689999999987653
|
| >d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Probab=95.48 E-value=0.0084 Score=43.12 Aligned_cols=77 Identities=14% Similarity=0.038 Sum_probs=47.7
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCc-EEEEEeCCCCCCCC-CCCCceeEEEeeCCCH--HHHHHHHHhccc--c
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRPPPGWF-PTALVDRYITFDALDP--TDTALKLSLISQ--E 82 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~-~V~~~~R~~~~~~~-~~~~~~~~i~~Dl~d~--~~~~~~~~~~~~--~ 82 (211)
+.+|||+|| |.||...+..+. ..|. +|+++++++.+... ..-+.. . ..|..+. .+..+.+..... .
T Consensus 29 G~~VlV~Ga-G~iG~~~~~~ak-----~~Ga~~Vi~~~~~~~~~~~a~~lGa~-~-vi~~~~~~~~~~~~~i~~~~~~~g 100 (182)
T d1vj0a2 29 GKTVVIQGA-GPLGLFGVVIAR-----SLGAENVIVIAGSPNRLKLAEEIGAD-L-TLNRRETSVEERRKAIMDITHGRG 100 (182)
T ss_dssp TCEEEEECC-SHHHHHHHHHHH-----HTTBSEEEEEESCHHHHHHHHHTTCS-E-EEETTTSCHHHHHHHHHHHTTTSC
T ss_pred CCEEEEECC-Cccchhheeccc-----ccccccccccccccccccccccccce-E-EEeccccchHHHHHHHHHhhCCCC
Confidence 578999996 899999999888 6887 69999997764211 111222 1 2344433 333333333211 2
Q ss_pred cceEEeecccC
Q 028258 83 ITNLFWVPLQV 93 (211)
Q Consensus 83 ~~~v~~~a~~~ 93 (211)
+|+||.+.+..
T Consensus 101 ~Dvvid~vG~~ 111 (182)
T d1vj0a2 101 ADFILEATGDS 111 (182)
T ss_dssp EEEEEECSSCT
T ss_pred ceEEeecCCch
Confidence 78888887653
|
| >d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=95.47 E-value=0.0063 Score=43.09 Aligned_cols=35 Identities=17% Similarity=0.132 Sum_probs=30.6
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
++|.++| .|.+|+.+++.|+ +.||+|.+.+|++.+
T Consensus 2 ~kIg~IG-lG~MG~~iA~~L~-----~~g~~v~~~d~~~~~ 36 (162)
T d3cuma2 2 KQIAFIG-LGHMGAPMATNLL-----KAGYLLNVFDLVQSA 36 (162)
T ss_dssp CEEEEEC-CSTTHHHHHHHHH-----HTTCEEEEECSSHHH
T ss_pred CEEEEEE-EHHHHHHHHHHHH-----HCCCeEEEEECchhh
Confidence 5688887 8999999999999 689999999997553
|
| >d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=95.42 E-value=0.051 Score=36.43 Aligned_cols=74 Identities=9% Similarity=0.076 Sum_probs=51.9
Q ss_pred CCCeEEEEcCC----------ChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHH
Q 028258 8 PKSVALIIGVT----------GISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLS 77 (211)
Q Consensus 8 ~~~~ilVtGat----------G~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~ 77 (211)
.+|+|||+|+. -+.+.+.++.|. +.||+++.+..+|........-.. -+...-...+.+.+.++
T Consensus 3 ~~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk-----~~g~~~IliN~NPeTVstd~d~aD-~lYfeplt~e~v~~Ii~ 76 (121)
T d1a9xa4 3 DREKIMVLGGGPNRIGQGIEFDYCCVHASLALR-----EDGYETIMVNCNPETVSTDYDTSD-RLYFEPVTLEDVLEIVR 76 (121)
T ss_dssp SSCEEEEECCCSCBTTBCHHHHHHHHHHHHHHH-----HTTCEEEEECCCTTSSTTSTTSSS-EEECCCCSHHHHHHHHH
T ss_pred CCCEEEEECCCcCcccccchhhHHHHHHHHHHH-----hcCCeEEEEecChhhhhcChhhcC-ceEEccCCHHHHHHHHH
Confidence 35889999963 378999999999 799999999888875432222233 44555566677777776
Q ss_pred hcccccceEEee
Q 028258 78 LISQEITNLFWV 89 (211)
Q Consensus 78 ~~~~~~~~v~~~ 89 (211)
.-. ++.|+-.
T Consensus 77 ~E~--p~~ii~~ 86 (121)
T d1a9xa4 77 IEK--PKGVIVQ 86 (121)
T ss_dssp HHC--CSEEECS
T ss_pred HhC--CCEEEee
Confidence 543 6776533
|
| >d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=95.41 E-value=0.011 Score=39.24 Aligned_cols=37 Identities=22% Similarity=0.139 Sum_probs=32.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
.+++++|.| .|++|..++..|. +.|.+|+++.|.+.-
T Consensus 21 ~p~~v~IiG-gG~ig~E~A~~l~-----~~G~~Vtlve~~~~i 57 (117)
T d1ebda2 21 VPKSLVVIG-GGYIGIELGTAYA-----NFGTKVTILEGAGEI 57 (117)
T ss_dssp CCSEEEEEC-CSHHHHHHHHHHH-----HTTCEEEEEESSSSS
T ss_pred cCCeEEEEC-CCccceeeeeeec-----ccccEEEEEEeccee
Confidence 468899998 8999999999999 689999999987653
|
| >d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Trypanosome (Leishmania mexicana) [TaxId: 5665]
Probab=95.40 E-value=0.005 Score=45.01 Aligned_cols=34 Identities=24% Similarity=0.217 Sum_probs=30.1
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
++|.|+| +|-.|++++..|. +.|++|+++.|+++
T Consensus 8 ~KI~ViG-aG~wGtAlA~~La-----~~g~~V~l~~r~~~ 41 (189)
T d1n1ea2 8 NKAVVFG-SGAFGTALAMVLS-----KKCREVCVWHMNEE 41 (189)
T ss_dssp EEEEEEC-CSHHHHHHHHHHH-----TTEEEEEEECSCHH
T ss_pred ceEEEEC-CCHHHHHHHHHHH-----HcCCeEEEEEecHH
Confidence 5799998 8999999999999 68999999998653
|
| >d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Escherichia coli [TaxId: 562]
Probab=95.38 E-value=0.021 Score=40.47 Aligned_cols=77 Identities=17% Similarity=0.040 Sum_probs=48.2
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEE-EEeCCCCCCC------C----------------CCCCceeEEEeeC
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVY-GAARRPPPGW------F----------------PTALVDRYITFDA 66 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~-~~~R~~~~~~------~----------------~~~~~~~~i~~Dl 66 (211)
-+|.|.||+|-+|+.|++.+.+ .++.++. +++|...... . ...... +..|+
T Consensus 5 ikI~i~Ga~GrMG~~i~~~i~~----~~~~~lv~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~D--ViIDF 78 (162)
T d1diha1 5 IRVAIAGAGGRMGRQLIQAALA----LEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDFD--VFIDF 78 (162)
T ss_dssp EEEEETTTTSHHHHHHHHHHHH----STTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTTSCS--EEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHh----CCCCEEEEEEecccchhccchhhhhhccccCCceeeccHHHHhcccc--eEEEe
Confidence 4699999999999999999885 5788855 4555432210 0 001122 55899
Q ss_pred CCHHHHHHHHHhccc-ccceEEeeccc
Q 028258 67 LDPTDTALKLSLISQ-EITNLFWVPLQ 92 (211)
Q Consensus 67 ~d~~~~~~~~~~~~~-~~~~v~~~a~~ 92 (211)
+.|+...+.++.+.. .+..|+-..|.
T Consensus 79 s~p~~~~~~~~~a~~~~~~~ViGTTG~ 105 (162)
T d1diha1 79 TRPEGTLNHLAFCRQHGKGMVIGTTGF 105 (162)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEECCCCC
T ss_pred ccHHHHHHHHHHHHhccceeEEecCCC
Confidence 999877666654321 14455544444
|
| >d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Potassium channel-related protein MthK species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]
Probab=95.32 E-value=0.0034 Score=42.77 Aligned_cols=57 Identities=19% Similarity=0.149 Sum_probs=42.6
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-CCCCCceeEEEeeCCCHHHHHHH
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-FPTALVDRYITFDALDPTDTALK 75 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-~~~~~~~~~i~~Dl~d~~~~~~~ 75 (211)
|+++|.| .|-+|+.+++.|. +. +|.++..++.... ....+++ ++.+|.++++.+.++
T Consensus 1 kHivI~G-~g~~g~~l~~~L~-----~~--~i~vi~~d~~~~~~~~~~~~~-~i~Gd~~~~~~L~~a 58 (129)
T d2fy8a1 1 RHVVICG-WSESTLECLRELR-----GS--EVFVLAEDENVRKKVLRSGAN-FVHGDPTRVSDLEKA 58 (129)
T ss_dssp CCEEEES-CCHHHHHHHHTSC-----GG--GEEEEESCTTHHHHHHHTTCE-EEESCTTSHHHHHHT
T ss_pred CEEEEEC-CCHHHHHHHHHHc-----CC--CCEEEEcchHHHHHHHhcCcc-ccccccCCHHHHHHh
Confidence 6789998 6889999999986 33 5677777665321 1246788 999999999876664
|
| >d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=95.28 E-value=0.013 Score=39.51 Aligned_cols=36 Identities=31% Similarity=0.405 Sum_probs=31.9
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
.++++|.| +|++|-.++..|. +.|.+|+.+.|.+..
T Consensus 30 ~~~vvIIG-gG~iG~E~A~~l~-----~~g~~Vtli~~~~~~ 65 (121)
T d1d7ya2 30 QSRLLIVG-GGVIGLELAATAR-----TAGVHVSLVETQPRL 65 (121)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHH-----HTTCEEEEEESSSST
T ss_pred CCeEEEEC-cchhHHHHHHHhh-----cccceEEEEeecccc
Confidence 57899988 8999999999999 689999999987653
|
| >d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Fatty oxidation complex alpha subunit, middle domain species: Pseudomonas fragi [TaxId: 296]
Probab=95.12 E-value=0.0048 Score=44.94 Aligned_cols=34 Identities=18% Similarity=0.139 Sum_probs=30.3
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
|+|.|+|| |.+|+.++..++ ..|++|++++++++
T Consensus 5 ~~vaViGa-G~mG~~iA~~~a-----~~G~~V~l~D~~~~ 38 (186)
T d1wdka3 5 KQAAVLGA-GIMGGGIAYQSA-----SKGTPILMKDINEH 38 (186)
T ss_dssp SSEEEECC-HHHHHHHHHHHH-----HTTCCEEEECSSHH
T ss_pred CEEEEECc-CHHHHHHHHHHH-----hCCCeEEEEECCHH
Confidence 67899995 999999999999 68999999999765
|
| >d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=95.12 E-value=0.0031 Score=44.91 Aligned_cols=78 Identities=17% Similarity=0.130 Sum_probs=47.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCc-EEEEEeCCCCCCCC-CCCCceeEEEeeCCCHHHHHHHHHhcc-cccc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRPPPGWF-PTALVDRYITFDALDPTDTALKLSLIS-QEIT 84 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~-~V~~~~R~~~~~~~-~~~~~~~~i~~Dl~d~~~~~~~~~~~~-~~~~ 84 (211)
...+++|+|++|.+|...+..+. ..|. +|+++++++.+... ..-+.. . ..|..+.+..++..+... ..+|
T Consensus 27 ~g~~vlV~G~~G~vG~~~~~~~~-----~~g~~~V~~~~~~~~~~~~~~~~Ga~-~-~i~~~~~~~~~~~~~~~~~~~~d 99 (170)
T d1jvba2 27 PTKTLLVVGAGGGLGTMAVQIAK-----AVSGATIIGVDVREEAVEAAKRAGAD-Y-VINASMQDPLAEIRRITESKGVD 99 (170)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHH-----HHTCCEEEEEESSHHHHHHHHHHTCS-E-EEETTTSCHHHHHHHHTTTSCEE
T ss_pred CCCEEEEEeccccceeeeeeccc-----ccccccccccccchhhHHHHHHcCCc-e-eeccCCcCHHHHHHHHhhcccch
Confidence 35789999999999999999888 4664 68888887654211 111222 1 234444433333333221 1278
Q ss_pred eEEeeccc
Q 028258 85 NLFWVPLQ 92 (211)
Q Consensus 85 ~v~~~a~~ 92 (211)
.++.+++.
T Consensus 100 ~vid~~g~ 107 (170)
T d1jvba2 100 AVIDLNNS 107 (170)
T ss_dssp EEEESCCC
T ss_pred hhhccccc
Confidence 88877753
|
| >d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PH1109 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=95.09 E-value=0.026 Score=38.97 Aligned_cols=34 Identities=12% Similarity=0.165 Sum_probs=30.1
Q ss_pred CCeEEEEcCC---ChHHHHHHHHhhCCCCCCCCcEEEEEeCC
Q 028258 9 KSVALIIGVT---GISGLSLAEALKNPTTPGSPWKVYGAARR 47 (211)
Q Consensus 9 ~~~ilVtGat---G~iG~~l~~~L~~~~~~~~g~~V~~~~R~ 47 (211)
.|+|.|.||| +-.|..+++.|. +.||+|+.+..+
T Consensus 19 ~ksIAVVGaS~~~~~~g~~v~~~L~-----~~g~~v~pVnP~ 55 (139)
T d2d59a1 19 YKKIALVGASPKPERDANIVMKYLL-----EHGYDVYPVNPK 55 (139)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHH-----HTTCEEEEECTT
T ss_pred CCeEEEEeecCCCCCchHHHHHHHH-----HCCCEEEEECCc
Confidence 5889999999 789999999999 689999988654
|
| >d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Plasmodium falciparum [TaxId: 5833]
Probab=95.08 E-value=0.024 Score=37.73 Aligned_cols=35 Identities=23% Similarity=0.227 Sum_probs=31.5
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
.++++|.| .|++|-.++..|. +.|.+|+.+.|.+.
T Consensus 22 p~~v~IiG-gG~iG~E~A~~l~-----~~g~~Vtlv~~~~~ 56 (117)
T d1onfa2 22 SKKIGIVG-SGYIAVELINVIK-----RLGIDSYIFARGNR 56 (117)
T ss_dssp CSEEEEEC-CSHHHHHHHHHHH-----TTTCEEEEECSSSS
T ss_pred CCEEEEEC-CchHHHHHHHHHH-----hccccceeeehhcc
Confidence 57899998 8999999999999 68999999998754
|
| >d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain species: Pyrococcus horikoshii [TaxId: 53953]
Probab=95.06 E-value=0.036 Score=37.65 Aligned_cols=36 Identities=22% Similarity=0.213 Sum_probs=29.4
Q ss_pred CCCeEEEEcCC---ChHHHHHHHHhhCCCCCCCC-cEEEEEeCCC
Q 028258 8 PKSVALIIGVT---GISGLSLAEALKNPTTPGSP-WKVYGAARRP 48 (211)
Q Consensus 8 ~~~~ilVtGat---G~iG~~l~~~L~~~~~~~~g-~~V~~~~R~~ 48 (211)
..|+|.|.||| +..|..+.+.|. +.+ ++|+.+..+.
T Consensus 7 ~PksIAVVGaS~~~~~~g~~v~~~L~-----~~~~g~v~pVnP~~ 46 (129)
T d2csua1 7 NPKGIAVIGASNDPKKLGYEVFKNLK-----EYKKGKVYPVNIKE 46 (129)
T ss_dssp SCSEEEEETCCSCTTSHHHHHHHHHT-----TCCSSEEEEECSSC
T ss_pred CCCeEEEEccCCCCCCcHHHHHHHHH-----HcCCCcEEEeccCc
Confidence 36899999999 999999999988 344 7899887554
|
| >d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=95.04 E-value=0.0053 Score=43.44 Aligned_cols=37 Identities=16% Similarity=0.118 Sum_probs=30.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
.+.+++|.|+ |.+|...+..+. ..|.+|+++++++.+
T Consensus 27 ~g~~VlV~Ga-G~vG~~~~~~ak-----~~G~~Vi~~~~~~~~ 63 (166)
T d1llua2 27 PGQWVAISGI-GGLGHVAVQYAR-----AMGLHVAAIDIDDAK 63 (166)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHH-----HTTCEEEEEESCHHH
T ss_pred CCCEEEEeec-cccHHHHHHHHH-----HcCCccceecchhhH
Confidence 3578999986 999999888777 688999999988654
|
| >d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=95.01 E-value=0.019 Score=38.66 Aligned_cols=37 Identities=27% Similarity=0.296 Sum_probs=31.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
..|+++|.| .|++|..++..|. +.|.+|+.+.|.+..
T Consensus 29 ~~k~vvViG-gG~iG~E~A~~l~-----~~g~~Vtlie~~~~~ 65 (123)
T d1nhpa2 29 EVNNVVVIG-SGYIGIEAAEAFA-----KAGKKVTVIDILDRP 65 (123)
T ss_dssp TCCEEEEEC-CSHHHHHHHHHHH-----HTTCEEEEEESSSST
T ss_pred CCCEEEEEC-ChHHHHHHHHHhh-----ccceEEEEEEecCcc
Confidence 457899997 8999999999999 689999999887653
|
| >d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Escherichia coli [TaxId: 562]
Probab=94.91 E-value=0.016 Score=38.48 Aligned_cols=36 Identities=19% Similarity=0.242 Sum_probs=31.7
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
+|+++|.| .|++|..++..|. +.|.+|+.+.|.+..
T Consensus 21 p~~vvIiG-gG~ig~E~A~~l~-----~~G~~Vtlve~~~~~ 56 (116)
T d1gesa2 21 PERVAVVG-AGYIGVELGGVIN-----GLGAKTHLFEMFDAP 56 (116)
T ss_dssp CSEEEEEC-CSHHHHHHHHHHH-----HTTCEEEEECSSSSS
T ss_pred CCEEEEEC-CChhhHHHHHHhh-----ccccEEEEEeecchh
Confidence 57899998 8999999999999 689999999987653
|
| >d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=94.90 E-value=0.035 Score=37.63 Aligned_cols=75 Identities=13% Similarity=0.107 Sum_probs=53.6
Q ss_pred CCCeEEEEcC----------CChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHH
Q 028258 8 PKSVALIIGV----------TGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLS 77 (211)
Q Consensus 8 ~~~~ilVtGa----------tG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~ 77 (211)
..|+|||+|+ --+.+.+.+++|. +.||+++.+..+|........-.. -+...-...+.+.+.++
T Consensus 6 ~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alk-----e~g~~~iliN~NP~TVstd~d~aD-~lYfePlt~e~v~~Ii~ 79 (127)
T d1a9xa3 6 DIKSILILGAGPIVIGQACEFDYSGAQACKALR-----EEGYRVINVNSNPATIMTDPEMAD-ATYIEPIHWEVVRKIIE 79 (127)
T ss_dssp SCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHH-----HHTCEEEEECSCTTCGGGCGGGSS-EEECSCCCHHHHHHHHH
T ss_pred CCCEEEEECCCcCcccccchhHHHHHHHHHHHH-----HcCCeEEEecCchHhhhcChhhcc-eeeeecCCHHHHHHHHH
Confidence 3589999997 4578999999999 799999999888875321112223 45566667788888887
Q ss_pred hcccccceEEeec
Q 028258 78 LISQEITNLFWVP 90 (211)
Q Consensus 78 ~~~~~~~~v~~~a 90 (211)
.-. ++.|+-..
T Consensus 80 ~E~--pd~il~~~ 90 (127)
T d1a9xa3 80 KER--PDAVLPTM 90 (127)
T ss_dssp HHC--CSEEECSS
T ss_pred HhC--cCCeEEEe
Confidence 644 78775433
|
| >d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Azotobacter vinelandii [TaxId: 354]
Probab=94.89 E-value=0.022 Score=37.99 Aligned_cols=37 Identities=19% Similarity=0.091 Sum_probs=32.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
.+++++|+| +|+||-.++..|. ..|.+|+.+.|+..-
T Consensus 21 ~p~~i~IiG-~G~ig~E~A~~l~-----~~G~~Vtiv~~~~~l 57 (119)
T d3lada2 21 VPGKLGVIG-AGVIGLELGSVWA-----RLGAEVTVLEAMDKF 57 (119)
T ss_dssp CCSEEEEEC-CSHHHHHHHHHHH-----HTTCEEEEEESSSSS
T ss_pred CCCeEEEEC-CChHHHHHHHHHH-----HcCCceEEEEeeccc
Confidence 468899998 8999999999999 689999999987653
|
| >d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PF0725 species: Pyrococcus furiosus [TaxId: 2261]
Probab=94.89 E-value=0.035 Score=36.97 Aligned_cols=33 Identities=12% Similarity=0.180 Sum_probs=28.6
Q ss_pred CeEEEEcCC---ChHHHHHHHHhhCCCCCCCCcEEEEEeCC
Q 028258 10 SVALIIGVT---GISGLSLAEALKNPTTPGSPWKVYGAARR 47 (211)
Q Consensus 10 ~~ilVtGat---G~iG~~l~~~L~~~~~~~~g~~V~~~~R~ 47 (211)
|+|.|.||| +-.|..+.+.|+ +.||+|+.+..+
T Consensus 2 KsIAVvGaS~~~~k~g~~v~~~L~-----~~g~~V~pVnP~ 37 (116)
T d1y81a1 2 RKIALVGASKNPAKYGNIILKDLL-----SKGFEVLPVNPN 37 (116)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHH-----HTTCEEEEECTT
T ss_pred cEEEEEcccCCCCCcHHHHHHHHH-----HCCCEEEEEccc
Confidence 689999998 779999999999 699999988644
|
| >d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Probab=94.87 E-value=0.016 Score=40.93 Aligned_cols=79 Identities=18% Similarity=0.054 Sum_probs=48.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCC-CCCCceeEEEeeCC--CHHHHHHHHHhcc-ccc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF-PTALVDRYITFDAL--DPTDTALKLSLIS-QEI 83 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~-~~~~~~~~i~~Dl~--d~~~~~~~~~~~~-~~~ 83 (211)
.+.+++|+| +|.+|...+..+. ..|.+|+++++++.+... ..-+....+..|-. +...+.+.+.... ..+
T Consensus 26 ~g~~vlV~G-~G~vG~~~~~~ak-----~~Ga~vi~v~~~~~r~~~a~~~ga~~~~~~~~~~~~~~~~~~~~~~~~g~g~ 99 (170)
T d1e3ja2 26 LGTTVLVIG-AGPIGLVSVLAAK-----AYGAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLP 99 (170)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHTTCSEEEECCTTTSCHHHHHHHHHHHSSSCC
T ss_pred CCCEEEEEc-ccccchhhHhhHh-----hhcccccccchHHHHHHHHHHcCCcEEEeccccccccchhhhhhhcccccCC
Confidence 357899997 7999999998887 688999999998764210 01122203333332 3334444444321 127
Q ss_pred ceEEeeccc
Q 028258 84 TNLFWVPLQ 92 (211)
Q Consensus 84 ~~v~~~a~~ 92 (211)
|.+|.+++.
T Consensus 100 D~vid~~g~ 108 (170)
T d1e3ja2 100 NVTIDCSGN 108 (170)
T ss_dssp SEEEECSCC
T ss_pred ceeeecCCC
Confidence 888888864
|
| >d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Klebsiella pneumoniae [TaxId: 573]
Probab=94.72 E-value=0.024 Score=44.42 Aligned_cols=35 Identities=26% Similarity=0.341 Sum_probs=31.5
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
+|+|+|+| +|+-|...+.+|. +.|++|+++.++..
T Consensus 2 ~KKI~IIG-aG~sGL~aA~~L~-----k~G~~V~viEk~~~ 36 (314)
T d2bi7a1 2 SKKILIVG-AGFSGAVIGRQLA-----EKGHQVHIIDQRDH 36 (314)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHH-----TTTCEEEEEESSSS
T ss_pred CCEEEEEC-CcHHHHHHHHHHH-----hCCCCEEEEECCCC
Confidence 58899998 8999999999999 68999999998765
|
| >d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=94.71 E-value=0.017 Score=40.91 Aligned_cols=37 Identities=22% Similarity=0.151 Sum_probs=31.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
.+.+++|+|+ |.+|...+..+. ..|.+|+++++++.+
T Consensus 27 ~g~~vlI~Ga-G~vG~~a~q~ak-----~~G~~vi~~~~~~~k 63 (168)
T d1piwa2 27 PGKKVGIVGL-GGIGSMGTLISK-----AMGAETYVISRSSRK 63 (168)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHH-----HHTCEEEEEESSSTT
T ss_pred CCCEEEEECC-CCcchhHHHHhh-----hccccccccccchhH
Confidence 3578999996 999999888777 689999999998775
|
| >d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=94.68 E-value=0.018 Score=38.18 Aligned_cols=37 Identities=22% Similarity=0.190 Sum_probs=32.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
.+++++|.| .|++|-.++..|. +.|.+|+++.|.+.-
T Consensus 20 ~p~~vvIiG-gG~~G~E~A~~l~-----~~g~~Vtlve~~~~i 56 (115)
T d1lvla2 20 LPQHLVVVG-GGYIGLELGIAYR-----KLGAQVSVVEARERI 56 (115)
T ss_dssp CCSEEEEEC-CSHHHHHHHHHHH-----HHTCEEEEECSSSSS
T ss_pred CCCeEEEEC-CCHHHHHHHHHHh-----hcccceEEEeeeccc
Confidence 468899997 8999999999999 689999999887653
|
| >d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative zinc-binding alcohol dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=94.68 E-value=0.0031 Score=45.92 Aligned_cols=74 Identities=12% Similarity=0.012 Sum_probs=43.6
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcE-EEEEeCCCCCC-CCC-CCCceeEEEeeCCCHHHHHHHHHh-cccccce
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWK-VYGAARRPPPG-WFP-TALVDRYITFDALDPTDTALKLSL-ISQEITN 85 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~-V~~~~R~~~~~-~~~-~~~~~~~i~~Dl~d~~~~~~~~~~-~~~~~~~ 85 (211)
++|||+||+|.+|+..++.+. ..|.+ |+++++++++. ... ..+.+ ...|..+++. .+.++. .+..+|+
T Consensus 32 etVLI~gaaGgVG~~aiQlak-----~~Ga~~vi~~~~~~e~~~~l~~~~gad--~vi~~~~~~~-~~~~~~~~~~GvDv 103 (187)
T d1vj1a2 32 QTMVVSGAAGACGSLAGQIGH-----LLGCSRVVGICGTQEKCLFLTSELGFD--AAVNYKTGNV-AEQLREACPGGVDV 103 (187)
T ss_dssp CEEEESSTTSTTGGGHHHHHH-----HTTCSEEEEEESSHHHHHHHHHHSCCS--EEEETTSSCH-HHHHHHHCTTCEEE
T ss_pred CEEEEECCCchhhHHHHHHHH-----HcCCcceecccchHHHHhhhhhcccce--EEeeccchhH-HHHHHHHhccCceE
Confidence 679999999999999999887 57765 55555554321 110 11222 2446655432 222222 2223888
Q ss_pred EEeecc
Q 028258 86 LFWVPL 91 (211)
Q Consensus 86 v~~~a~ 91 (211)
|+.+.+
T Consensus 104 v~D~vG 109 (187)
T d1vj1a2 104 YFDNVG 109 (187)
T ss_dssp EEESSC
T ss_pred EEecCC
Confidence 887775
|
| >d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.67 E-value=0.02 Score=38.57 Aligned_cols=35 Identities=20% Similarity=0.213 Sum_probs=31.5
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
+|+++|.| .|+||-.++..|. +.|.+|+.+.|++.
T Consensus 22 pk~vvIvG-gG~iG~E~A~~l~-----~~G~~Vtlv~~~~~ 56 (125)
T d3grsa2 22 PGRSVIVG-AGYIAVEMAGILS-----ALGSKTSLMIRHDK 56 (125)
T ss_dssp CSEEEEEC-CSHHHHHHHHHHH-----HTTCEEEEECSSSS
T ss_pred CCEEEEEc-CCccHHHHHHHHh-----cCCcEEEEEeeccc
Confidence 57899998 8999999999999 68999999999765
|
| >d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=94.56 E-value=0.021 Score=38.96 Aligned_cols=36 Identities=19% Similarity=0.188 Sum_probs=32.0
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
.++++|.| +|++|-.++..|. +.|.+|+.+.|.+..
T Consensus 35 ~k~v~VIG-gG~iG~E~A~~l~-----~~g~~Vtvie~~~~~ 70 (133)
T d1q1ra2 35 DNRLVVIG-GGYIGLEVAATAI-----KANMHVTLLDTAARV 70 (133)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHH-----HTTCEEEEECSSSST
T ss_pred CCEEEEEC-CchHHHHHHHHHH-----hhCcceeeeeecccc
Confidence 57899998 8999999999999 689999999987653
|
| >d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Salmonella typhimurium [TaxId: 90371]
Probab=94.48 E-value=0.013 Score=41.26 Aligned_cols=34 Identities=24% Similarity=0.377 Sum_probs=30.1
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
+|-|+| .|.+|+.+++.|+ +.||+|++.+|++.+
T Consensus 2 kIgiIG-lG~MG~~~A~~L~-----~~G~~V~~~d~~~~~ 35 (161)
T d1vpda2 2 KVGFIG-LGIMGKPMSKNLL-----KAGYSLVVSDRNPEA 35 (161)
T ss_dssp EEEEEC-CSTTHHHHHHHHH-----HTTCEEEEECSCHHH
T ss_pred EEEEEe-hhHHHHHHHHHHH-----HCCCeEEEEeCCcch
Confidence 478887 8999999999999 699999999998653
|
| >d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH oxidase /nitrite reductase species: Pyrococcus furiosus [TaxId: 2261]
Probab=94.46 E-value=0.021 Score=38.22 Aligned_cols=35 Identities=34% Similarity=0.412 Sum_probs=30.5
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
.++++|.| .|++|-.++..|. +.|.+|+.+.|.+.
T Consensus 32 ~~~vvIiG-gG~iG~E~A~~l~-----~~g~~Vtlv~~~~~ 66 (122)
T d1xhca2 32 SGEAIIIG-GGFIGLELAGNLA-----EAGYHVKLIHRGAM 66 (122)
T ss_dssp HSEEEEEE-CSHHHHHHHHHHH-----HTTCEEEEECSSSC
T ss_pred CCcEEEEC-CcHHHHHHHHHhh-----cccceEEEEecccc
Confidence 36789988 8999999999999 68999999988654
|
| >d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Zymomonas mobilis [TaxId: 542]
Probab=94.44 E-value=0.014 Score=40.95 Aligned_cols=36 Identities=17% Similarity=0.266 Sum_probs=29.4
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCC
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~ 47 (211)
+|+|.|.|+||-||....+-+.++ .+.|+|.+++-.
T Consensus 2 pK~I~IlGsTGSIG~~tL~Vi~~~---~d~f~v~~lsa~ 37 (150)
T d1r0ka2 2 PRTVTVLGATGSIGHSTLDLIERN---LDRYQVIALTAN 37 (150)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHT---GGGEEEEEEEES
T ss_pred CcEEEEECCCcHHHHHHHHHHHcC---CCCcEEEEEEeC
Confidence 589999999999999999988641 356999988644
|
| >d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Siroheme synthase CysG, domain 1 species: Salmonella typhimurium [TaxId: 90371]
Probab=94.41 E-value=0.03 Score=36.86 Aligned_cols=56 Identities=18% Similarity=0.108 Sum_probs=42.4
Q ss_pred CCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC---CCCCCCceeEEEeeCCC
Q 028258 6 QNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG---WFPTALVDRYITFDALD 68 (211)
Q Consensus 6 ~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~---~~~~~~~~~~i~~Dl~d 68 (211)
+..+|++||+| .|-+|..-++.|+ +.|.+|++++....+. .....+++ ++.-++.+
T Consensus 9 ~l~~k~vlVvG-~G~va~~ka~~ll-----~~ga~v~v~~~~~~~~~~~~~~~~~i~-~~~~~~~~ 67 (113)
T d1pjqa1 9 QLRDRDCLIVG-GGDVAERKARLLL-----EAGARLTVNALTFIPQFTVWANEGMLT-LVEGPFDE 67 (113)
T ss_dssp CCBTCEEEEEC-CSHHHHHHHHHHH-----HTTBEEEEEESSCCHHHHHHHTTTSCE-EEESSCCG
T ss_pred EeCCCEEEEEC-CCHHHHHHHHHHH-----HCCCeEEEEeccCChHHHHHHhcCCce-eeccCCCH
Confidence 44679999998 8999999999999 6899999988765431 11245677 77766654
|
| >d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Sheep (Ovis orientalis aries) [TaxId: 9940]
Probab=94.41 E-value=0.015 Score=41.60 Aligned_cols=36 Identities=17% Similarity=0.234 Sum_probs=31.7
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
+++|-|+| -|.+|+.+++.|+ +.||+|++++|++++
T Consensus 2 ~~nIg~IG-lG~MG~~mA~~L~-----~~G~~V~v~dr~~~~ 37 (176)
T d2pgda2 2 QADIALIG-LAVMGQNLILNMN-----DHGFVVCAFNRTVSK 37 (176)
T ss_dssp CBSEEEEC-CSHHHHHHHHHHH-----HTTCCEEEECSSTHH
T ss_pred CCcEEEEe-EhHHHHHHHHHHH-----HCCCeEEEEcCCHHH
Confidence 36789998 7999999999999 689999999998753
|
| >d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Trypanosoma brucei [TaxId: 5691]
Probab=94.28 E-value=0.012 Score=42.00 Aligned_cols=34 Identities=24% Similarity=0.253 Sum_probs=29.9
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
+|-|+| .|.+|..+++.|+ +.||+|++.+|++++
T Consensus 3 kIGvIG-lG~MG~~ma~~L~-----~~G~~V~~~dr~~~~ 36 (178)
T d1pgja2 3 DVGVVG-LGVMGANLALNIA-----EKGFKVAVFNRTYSK 36 (178)
T ss_dssp SEEEEC-CSHHHHHHHHHHH-----HTTCCEEEECSSHHH
T ss_pred EEEEEe-ehHHHHHHHHHHH-----HCCCeEEEEECCHHH
Confidence 478887 9999999999999 689999999997653
|
| >d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Glycine oxidase ThiO species: Bacillus sp. [TaxId: 1409]
Probab=94.26 E-value=0.02 Score=43.23 Aligned_cols=32 Identities=25% Similarity=0.197 Sum_probs=29.0
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCC
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~ 48 (211)
.|+|+| +|.+|..++.+|. ++|++|+++.|..
T Consensus 6 DvvIIG-aGi~Gls~A~~La-----~~G~~V~vlE~~~ 37 (276)
T d1ryia1 6 EAVVIG-GGIIGSAIAYYLA-----KENKNTALFESGT 37 (276)
T ss_dssp EEEEEC-CSHHHHHHHHHHH-----HTTCCEEEECSSS
T ss_pred CEEEEC-cCHHHHHHHHHHH-----HCCCcEEEEeCCC
Confidence 399998 8999999999999 6899999999865
|
| >d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Escherichia coli [TaxId: 562]
Probab=94.24 E-value=0.026 Score=40.12 Aligned_cols=37 Identities=22% Similarity=0.156 Sum_probs=31.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
.+|+|||.| +|+.+++++..|. +.|.+|+++.|+.++
T Consensus 17 ~~k~vlIlG-aGGaarai~~al~-----~~g~~i~I~nRt~~k 53 (170)
T d1nyta1 17 PGLRILLIG-AGGASRGVLLPLL-----SLDCAVTITNRTVSR 53 (170)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHH-----HTTCEEEEECSSHHH
T ss_pred CCCEEEEEC-CcHHHHHHHHHhc-----ccceEEEeccchHHH
Confidence 468999999 6999999999999 577889999997654
|
| >d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: GDP-mannose 6-dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=94.09 E-value=0.022 Score=41.69 Aligned_cols=33 Identities=24% Similarity=0.263 Sum_probs=29.1
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
+|.|+| .|++|..++..|+ +.||+|++++.++.
T Consensus 2 kI~ViG-lG~vGl~~a~~la-----~~g~~V~g~D~n~~ 34 (202)
T d1mv8a2 2 RISIFG-LGYVGAVCAGCLS-----ARGHEVIGVDVSST 34 (202)
T ss_dssp EEEEEC-CSTTHHHHHHHHH-----HTTCEEEEECSCHH
T ss_pred EEEEEC-CCHhHHHHHHHHH-----hCCCcEEEEeCCHH
Confidence 488886 9999999999999 69999999997643
|
| >d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.07 E-value=0.036 Score=39.12 Aligned_cols=79 Identities=13% Similarity=-0.063 Sum_probs=49.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCc-EEEEEeCCCCCCCC-CCCCceeEEEeeCCCHHHHHHHHHhcc-cccc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRPPPGWF-PTALVDRYITFDALDPTDTALKLSLIS-QEIT 84 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~-~V~~~~R~~~~~~~-~~~~~~~~i~~Dl~d~~~~~~~~~~~~-~~~~ 84 (211)
.+.+|+|+|+ |.+|...+..+. ..|. +|+++++++.+... ..-+.+.++..+-.+.....+.+..-. ..+|
T Consensus 26 ~gd~VlI~G~-G~iG~~~~~~a~-----~~G~~~Vi~~d~~~~rl~~a~~~Ga~~~~~~~~~~~~~~~~~~~~~~g~g~D 99 (171)
T d1pl8a2 26 LGHKVLVCGA-GPIGMVTLLVAK-----AMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPE 99 (171)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHH-----HTTCSEEEEEESCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHHHTSCCS
T ss_pred CCCEEEEECC-CccHHHHHHHHH-----HcCCceEEeccCCHHHHHHHHHhCCcccccccccccccccccccccCCCCce
Confidence 3578999986 999999998887 5777 69999987664211 112333144444455555555443221 1278
Q ss_pred eEEeeccc
Q 028258 85 NLFWVPLQ 92 (211)
Q Consensus 85 ~v~~~a~~ 92 (211)
++|-+.+.
T Consensus 100 vvid~~G~ 107 (171)
T d1pl8a2 100 VTIECTGA 107 (171)
T ss_dssp EEEECSCC
T ss_pred EEEeccCC
Confidence 88887764
|
| >d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: GDI-like N domain domain: Guanine nucleotide dissociation inhibitor, GDI species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=93.94 E-value=0.025 Score=41.03 Aligned_cols=35 Identities=23% Similarity=0.263 Sum_probs=30.8
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
.-.|+|+| +|..|...+.+|. ++|++|.++.+++.
T Consensus 5 ~yDviViG-aG~~Gl~~A~~La-----~~G~~V~vlE~~~~ 39 (297)
T d2bcgg1 5 DYDVIVLG-TGITECILSGLLS-----VDGKKVLHIDKQDH 39 (297)
T ss_dssp BCSEEEEC-CSHHHHHHHHHHH-----HTTCCEEEECSSSS
T ss_pred cCCEEEEC-cCHHHHHHHHHHH-----HCCCCEEEEcCCCC
Confidence 45689998 9999999999999 68999999998764
|
| >d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=93.94 E-value=0.0068 Score=43.41 Aligned_cols=75 Identities=13% Similarity=0.006 Sum_probs=44.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcE-EEEEeCCCCCCCC-CCCCc-eeEEEeeCCCHHHHHHHHHhcc-ccc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWK-VYGAARRPPPGWF-PTALV-DRYITFDALDPTDTALKLSLIS-QEI 83 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~-V~~~~R~~~~~~~-~~~~~-~~~i~~Dl~d~~~~~~~~~~~~-~~~ 83 (211)
.+.+|+|+|+ |.+|...+..+. ..|.+ |+++++++.+... ..-+. + + .|..+++ +.+.++.+. ..+
T Consensus 28 ~g~~VlI~G~-G~iG~~~~~~ak-----~~g~~~v~~~~~~~~k~~~a~~~Ga~~-~--i~~~~~~-~~~~i~~~t~gg~ 97 (174)
T d1f8fa2 28 PASSFVTWGA-GAVGLSALLAAK-----VCGASIIIAVDIVESRLELAKQLGATH-V--INSKTQD-PVAAIKEITDGGV 97 (174)
T ss_dssp TTCEEEEESC-SHHHHHHHHHHH-----HHTCSEEEEEESCHHHHHHHHHHTCSE-E--EETTTSC-HHHHHHHHTTSCE
T ss_pred CCCEEEEeCC-CHHHhhhhhccc-----ccccceeeeeccHHHHHHHHHHcCCeE-E--EeCCCcC-HHHHHHHHcCCCC
Confidence 3568999997 999999998887 46665 5566666543211 11122 3 3 4555533 333333321 127
Q ss_pred ceEEeeccc
Q 028258 84 TNLFWVPLQ 92 (211)
Q Consensus 84 ~~v~~~a~~ 92 (211)
|++|.+.+.
T Consensus 98 D~vid~~G~ 106 (174)
T d1f8fa2 98 NFALESTGS 106 (174)
T ss_dssp EEEEECSCC
T ss_pred cEEEEcCCc
Confidence 888888764
|
| >d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Mammalian thioredoxin reductase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=93.91 E-value=0.032 Score=37.41 Aligned_cols=34 Identities=24% Similarity=0.226 Sum_probs=30.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~ 47 (211)
.+++++|+| .|+||-.++..|. .-|.+|+++.|+
T Consensus 19 ~P~~vvIIG-gG~iG~E~A~~l~-----~lG~~Vtii~~~ 52 (122)
T d1h6va2 19 CPGKTLVVG-ASYVALECAGFLA-----GIGLDVTVMVRS 52 (122)
T ss_dssp CCCSEEEEC-CSHHHHHHHHHHH-----HTTCCEEEEESS
T ss_pred CCCeEEEEC-CCccHHHHHHHHh-----hcCCeEEEEEec
Confidence 457899998 8999999999999 689999999875
|
| >d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Conserved hypothetical protein MTH1747 species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=93.89 E-value=0.027 Score=39.10 Aligned_cols=34 Identities=24% Similarity=0.236 Sum_probs=29.0
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
+|.|+| .|.+|+.+++.|+ ++||+|+..+|++.+
T Consensus 2 kIgiIG-~G~mG~~ia~~l~-----~~g~~v~~~~~~~~~ 35 (152)
T d1i36a2 2 RVGFIG-FGEVAQTLASRLR-----SRGVEVVTSLEGRSP 35 (152)
T ss_dssp EEEEES-CSHHHHHHHHHHH-----HTTCEEEECCTTCCH
T ss_pred EEEEEc-HHHHHHHHHHHHH-----HCCCeEEEEcCchhH
Confidence 478887 8999999999999 689999988876653
|
| >d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Probab=93.87 E-value=0.0085 Score=42.99 Aligned_cols=78 Identities=14% Similarity=0.049 Sum_probs=45.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCc-EEEEEeCCCCCCCC-CCCCceeEEEeeCCCHHHHHHHHHhcc-cccc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRPPPGWF-PTALVDRYITFDALDPTDTALKLSLIS-QEIT 84 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~-~V~~~~R~~~~~~~-~~~~~~~~i~~Dl~d~~~~~~~~~~~~-~~~~ 84 (211)
.+.+|+|+|+ |.+|...+..+. ..|. +|+++++++.+... ..-+.. ...|..+.+..++..+..+ ..+|
T Consensus 27 ~g~~VlI~Ga-G~vGl~~~q~ak-----~~Ga~~Vi~~d~~~~r~~~a~~lGa~--~~i~~~~~~~~~~v~~~t~g~G~D 98 (174)
T d1jqba2 27 MGSSVVVIGI-GAVGLMGIAGAK-----LRGAGRIIGVGSRPICVEAAKFYGAT--DILNYKNGHIEDQVMKLTNGKGVD 98 (174)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHH-----TTTCSCEEEECCCHHHHHHHHHHTCS--EEECGGGSCHHHHHHHHTTTSCEE
T ss_pred CCCEEEEEcC-Ccchhhhhhhhh-----cccccccccccchhhhHHHHHhhCcc--ccccccchhHHHHHHHHhhccCcc
Confidence 3568999985 999999998888 6776 59999887654210 111222 1234444322222222111 1278
Q ss_pred eEEeecccC
Q 028258 85 NLFWVPLQV 93 (211)
Q Consensus 85 ~v~~~a~~~ 93 (211)
++|.+++..
T Consensus 99 ~vid~~g~~ 107 (174)
T d1jqba2 99 RVIMAGGGS 107 (174)
T ss_dssp EEEECSSCT
T ss_pred eEEEccCCH
Confidence 898888754
|
| >d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-2-hydroxyisocaproate dehydrogenase species: Lactobacillus casei [TaxId: 1582]
Probab=93.76 E-value=0.08 Score=38.56 Aligned_cols=36 Identities=25% Similarity=0.245 Sum_probs=31.9
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
+|++.|.| .|-||+.+++.|. .-|.+|++.++.+..
T Consensus 45 ~ktvgIiG-~G~IG~~va~~l~-----~fg~~v~~~d~~~~~ 80 (199)
T d1dxya1 45 QQTVGVMG-TGHIGQVAIKLFK-----GFGAKVIAYDPYPMK 80 (199)
T ss_dssp GSEEEEEC-CSHHHHHHHHHHH-----HTTCEEEEECSSCCS
T ss_pred ceeeeeee-ccccccccccccc-----ccceeeeccCCccch
Confidence 58899998 9999999999998 789999999986553
|
| >d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Escherichia coli [TaxId: 562]
Probab=93.75 E-value=0.033 Score=38.98 Aligned_cols=36 Identities=19% Similarity=0.277 Sum_probs=29.0
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCC
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~ 48 (211)
|+|.|.|+||-||+..++-+.++ .+.|+|.+++-..
T Consensus 2 K~I~IlGsTGSIG~~tL~Vi~~~---~d~f~v~~Lsa~~ 37 (151)
T d1q0qa2 2 KQLTILGSTGSIGCSTLDVVRHN---PEHFRVVALVAGK 37 (151)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHC---TTTEEEEEEEESS
T ss_pred CeEEEEcCCcHHHHHHHHHHHhC---CCCcEEEEEEecC
Confidence 67999999999999999987642 4579999887443
|
| >d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=93.72 E-value=0.037 Score=38.28 Aligned_cols=35 Identities=26% Similarity=0.177 Sum_probs=30.3
Q ss_pred CCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeC
Q 028258 6 QNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAAR 46 (211)
Q Consensus 6 ~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R 46 (211)
+..+|++||+|| |.+|..-++.|+ +.|.+|++++.
T Consensus 10 ~l~gkrvLViGg-G~va~~ka~~Ll-----~~GA~VtVvap 44 (150)
T d1kyqa1 10 QLKDKRILLIGG-GEVGLTRLYKLM-----PTGCKLTLVSP 44 (150)
T ss_dssp CCTTCEEEEEEE-SHHHHHHHHHHG-----GGTCEEEEEEE
T ss_pred eeCCCEEEEECC-CHHHHHHHHHHH-----HCCCEEEEEeC
Confidence 346799999995 999999999999 68999998864
|
| >d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=93.70 E-value=0.043 Score=40.92 Aligned_cols=35 Identities=29% Similarity=0.260 Sum_probs=30.9
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
.|+|+|+| +|.-|...+.+|. +.|++|+++.+++.
T Consensus 1 ~KkV~IIG-aG~aGL~aA~~La-----~~G~~V~vlE~~~~ 35 (373)
T d1seza1 1 AKRVAVIG-AGVSGLAAAYKLK-----IHGLNVTVFEAEGK 35 (373)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHH-----TTSCEEEEECSSSS
T ss_pred CCEEEEEC-cCHHHHHHHHHHH-----hCCCCEEEEeCCCC
Confidence 47899998 8999999999999 68999999987654
|
| >d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Streptococcus pyogenes [TaxId: 1314]
Probab=93.66 E-value=0.047 Score=37.94 Aligned_cols=34 Identities=21% Similarity=0.235 Sum_probs=29.3
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
+|.++| +|-+|+++++.|+ +.+++|++..|++++
T Consensus 2 kIg~IG-~G~mG~al~~~l~-----~~~~~i~v~~r~~~~ 35 (152)
T d2ahra2 2 KIGIIG-VGKMASAIIKGLK-----QTPHELIISGSSLER 35 (152)
T ss_dssp EEEEEC-CSHHHHHHHHHHT-----TSSCEEEEECSSHHH
T ss_pred EEEEEe-ccHHHHHHHHHHH-----hCCCeEEEEcChHHh
Confidence 477887 9999999999999 689999999987653
|
| >d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: 2,4-dienoyl-CoA reductase, middle domain species: Escherichia coli [TaxId: 562]
Probab=93.55 E-value=0.067 Score=38.40 Aligned_cols=37 Identities=19% Similarity=0.179 Sum_probs=32.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
.+|+|+|+| +|..|-..+..|. .+||+|+++.+.+..
T Consensus 42 ~~k~V~IIG-aGPAGL~AA~~la-----~~G~~Vtl~E~~~~~ 78 (179)
T d1ps9a3 42 QKKNLAVVG-AGPAGLAFAINAA-----ARGHQVTLFDAHSEI 78 (179)
T ss_dssp SCCEEEEEC-CSHHHHHHHHHHH-----TTTCEEEEEESSSSS
T ss_pred CCcEEEEEC-ccHHHHHHHHHHH-----hhccceEEEeccCcc
Confidence 468999998 8999999999999 699999999987653
|
| >d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=93.52 E-value=0.11 Score=37.30 Aligned_cols=36 Identities=22% Similarity=0.056 Sum_probs=31.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
..+++.|.| .|.||+.+++.|. .-|.+|+..++...
T Consensus 43 ~~~~vgiiG-~G~IG~~va~~l~-----~fg~~v~~~d~~~~ 78 (188)
T d1sc6a1 43 RGKKLGIIG-YGHIGTQLGILAE-----SLGMYVYFYDIENK 78 (188)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHH-----HTTCEEEEECSSCC
T ss_pred cceEEEEee-cccchhhhhhhcc-----cccceEeecccccc
Confidence 467899997 9999999999998 78999999998654
|
| >d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Neisseria meningitidis [TaxId: 487]
Probab=93.51 E-value=0.035 Score=37.43 Aligned_cols=36 Identities=22% Similarity=0.185 Sum_probs=31.9
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
+++++|.| .|+||-.++..|. ..|.+|+.+.|++.-
T Consensus 26 p~~vvIiG-gG~IG~E~A~~~~-----~~G~~Vtive~~~~i 61 (125)
T d1ojta2 26 PGKLLIIG-GGIIGLEMGTVYS-----TLGSRLDVVEMMDGL 61 (125)
T ss_dssp CSEEEEES-CSHHHHHHHHHHH-----HHTCEEEEECSSSSS
T ss_pred CCeEEEEC-CCHHHHHHHHHhh-----cCCCEEEEEEeeccc
Confidence 57899998 8999999999999 689999999987653
|
| >d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Acetaldehyde dehydrogenase (acylating) species: Pseudomonas sp. [TaxId: 306]
Probab=93.44 E-value=0.01 Score=41.97 Aligned_cols=36 Identities=25% Similarity=0.289 Sum_probs=24.5
Q ss_pred CCeEEEEcCCChHHHHH-HHHhhCCCCCCCCcEEEEE-eCCCC
Q 028258 9 KSVALIIGVTGISGLSL-AEALKNPTTPGSPWKVYGA-ARRPP 49 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l-~~~L~~~~~~~~g~~V~~~-~R~~~ 49 (211)
+-++.|.| +|.+|+.+ .+.|.+ ....+++++ +|++.
T Consensus 4 kirvaIIG-aG~ig~~~~~~~l~~----~~~~el~avas~~~~ 41 (157)
T d1nvmb1 4 KLKVAIIG-SGNIGTDLMIKVLRN----AKYLEMGAMVGIDAA 41 (157)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHHHH----CSSEEEEEEECSCTT
T ss_pred CcEEEEEc-CcHHHHHHHHHHHhh----CCcceEEEEEecchh
Confidence 44799999 99999865 455542 455677766 56554
|
| >d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase species: Xanthobacter sp., py2 [TaxId: 35809]
Probab=93.40 E-value=0.053 Score=35.87 Aligned_cols=36 Identities=11% Similarity=0.188 Sum_probs=31.4
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
.++++|.| +|++|..++..|. ..|.+|+.+.|++..
T Consensus 22 ~~~vvVvG-gG~ig~E~A~~l~-----~~g~~vt~i~~~~~~ 57 (121)
T d1mo9a2 22 GSTVVVVG-GSKTAVEYGCFFN-----ATGRRTVMLVRTEPL 57 (121)
T ss_dssp CSEEEEEC-CSHHHHHHHHHHH-----HTTCEEEEECSSCTT
T ss_pred CCEEEEEC-CCHHHHHHHHHHH-----hcchhheEeeccchh
Confidence 57899987 9999999999999 688999999987653
|
| >d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Garden pea (Pisum sativum) [TaxId: 3888]
Probab=93.30 E-value=0.036 Score=37.11 Aligned_cols=37 Identities=16% Similarity=0.111 Sum_probs=32.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
.+++++|+| .|+||-.++..|. +.|.+|+.+.|.+..
T Consensus 24 ~p~~~viiG-~G~iglE~A~~~~-----~~G~~Vtvi~~~~~~ 60 (123)
T d1dxla2 24 IPKKLVVIG-AGYIGLEMGSVWG-----RIGSEVTVVEFASEI 60 (123)
T ss_dssp CCSEEEESC-CSHHHHHHHHHHH-----HHTCEEEEECSSSSS
T ss_pred cCCeEEEEc-cchHHHHHHHHHH-----hcCCeEEEEEEcccc
Confidence 468999998 8999999999999 689999999987664
|
| >d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase-like protein HI0607 species: Haemophilus influenzae [TaxId: 727]
Probab=93.28 E-value=0.032 Score=39.52 Aligned_cols=37 Identities=22% Similarity=0.246 Sum_probs=30.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCc-EEEEEeCCCCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRPPP 50 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~-~V~~~~R~~~~ 50 (211)
..|+|+|+| +|+.|++++..|. +.|. +|.++.|++++
T Consensus 16 ~~~~vlIlG-aGGaarai~~aL~-----~~g~~~I~I~nR~~~k 53 (167)
T d1npya1 16 KNAKVIVHG-SGGMAKAVVAAFK-----NSGFEKLKIYARNVKT 53 (167)
T ss_dssp TTSCEEEEC-SSTTHHHHHHHHH-----HTTCCCEEEECSCHHH
T ss_pred CCCeEEEEC-CCHHHHHHHHHHH-----HCCCCEEEEecccHHH
Confidence 357899998 5999999999999 5776 58888887653
|
| >d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=92.89 E-value=0.073 Score=37.80 Aligned_cols=36 Identities=19% Similarity=0.157 Sum_probs=29.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
.+|+|+|.| +|+.+++++..|. ..+ +|+++.|+.++
T Consensus 17 ~~k~vlIlG-aGG~arai~~aL~-----~~~-~i~I~nR~~~k 52 (177)
T d1nvta1 17 KDKNIVIYG-AGGAARAVAFELA-----KDN-NIIIANRTVEK 52 (177)
T ss_dssp CSCEEEEEC-CSHHHHHHHHHHT-----SSS-EEEEECSSHHH
T ss_pred CCCEEEEEC-CcHHHHHHHHHHc-----ccc-ceeeehhhhhH
Confidence 568999998 7889999999997 456 89999887553
|
| >d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Dihydropyrimidine dehydrogenase, domain 2 species: Pig (Sus scrofa) [TaxId: 9823]
Probab=92.73 E-value=0.047 Score=38.77 Aligned_cols=36 Identities=14% Similarity=0.149 Sum_probs=31.2
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcE-EEEEeCCCCC
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWK-VYGAARRPPP 50 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~-V~~~~R~~~~ 50 (211)
+|+|+|+| +|..|-..+..|. ..|++ |+++.|++..
T Consensus 4 ~~kVaIIG-aGpaGl~aA~~l~-----~~G~~~V~v~E~~~~~ 40 (196)
T d1gtea4 4 SAKIALLG-AGPASISCASFLA-----RLGYSDITIFEKQEYV 40 (196)
T ss_dssp GCCEEEEC-CSHHHHHHHHHHH-----HTTCCCEEEEESSSSC
T ss_pred CCEEEEEC-ChHHHHHHHHHHH-----HCCCCeEEEEEecCcc
Confidence 68899998 8999999999999 68885 9999987653
|
| >d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Probab=92.62 E-value=0.046 Score=38.70 Aligned_cols=37 Identities=22% Similarity=0.297 Sum_probs=28.6
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
+.+|+|.|| |.+|...+..+.. ..+.+|+++++++.+
T Consensus 29 GdtVlV~Ga-GG~G~~~~~~~~~----~g~~~Vi~~~~~~~k 65 (176)
T d2jhfa2 29 GSTCAVFGL-GGVGLSVIMGCKA----AGAARIIGVDINKDK 65 (176)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHH----TTCSEEEEECSCGGG
T ss_pred CCEEEEECC-CCcHHHHHHHHHH----cCCceEEeecCcHHH
Confidence 568999998 5688888888873 334579999988775
|
| >d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: L-aminoacid oxidase species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]
Probab=92.60 E-value=0.054 Score=41.17 Aligned_cols=36 Identities=28% Similarity=0.368 Sum_probs=31.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
.+|+|+|+| +|..|...+.+|. +.|++|+++.+++.
T Consensus 29 ~pkkV~IIG-aG~aGLsaA~~L~-----~~G~~V~vlE~~~~ 64 (370)
T d2iida1 29 NPKHVVIVG-AGMAGLSAAYVLA-----GAGHQVTVLEASER 64 (370)
T ss_dssp SCCEEEEEC-CBHHHHHHHHHHH-----HHTCEEEEECSSSS
T ss_pred CCCeEEEEC-CCHHHHHHHHHHH-----HCCCCEEEEeCCCC
Confidence 467899998 8999999999999 68999999988654
|
| >d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Neisseria meningitidis, serogroup B [TaxId: 487]
Probab=92.37 E-value=0.044 Score=37.99 Aligned_cols=35 Identities=20% Similarity=0.316 Sum_probs=28.5
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
+|.++| +|-+|+++++.|++ ..+++|++.+|++++
T Consensus 2 kI~fIG-~G~MG~ai~~~l~~----~~~~~i~v~~r~~~~ 36 (152)
T d1yqga2 2 NVYFLG-GGNMAAAVAGGLVK----QGGYRIYIANRGAEK 36 (152)
T ss_dssp EEEEEC-CSHHHHHHHHHHHH----HCSCEEEEECSSHHH
T ss_pred EEEEEc-CcHHHHHHHHHHHH----CCCCcEEEEeCChhH
Confidence 578888 69999999999984 344899999998653
|
| >d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Dihydroxypyridine hydroxylase DhpH species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=92.34 E-value=0.071 Score=39.49 Aligned_cols=36 Identities=31% Similarity=0.404 Sum_probs=31.4
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
.++|+|+| .|..|..++..|. +.|++|+++.|++..
T Consensus 4 ~~kV~IiG-aG~aGl~~A~~L~-----~~G~~v~v~Er~~~~ 39 (265)
T d2voua1 4 TDRIAVVG-GSISGLTAALMLR-----DAGVDVDVYERSPQP 39 (265)
T ss_dssp CSEEEEEC-CSHHHHHHHHHHH-----HTTCEEEEECSSSSS
T ss_pred CCcEEEEC-cCHHHHHHHHHHH-----HCCCCEEEEeCCCCC
Confidence 46799998 8999999999999 689999999987653
|
| >d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: p-Hydroxybenzoate hydroxylase, PHBH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=92.33 E-value=0.039 Score=41.92 Aligned_cols=36 Identities=33% Similarity=0.383 Sum_probs=31.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
|+.+|+|.| .|..|..++..|. ..|++|+++.|++.
T Consensus 1 mk~~V~IvG-aGp~Gl~~A~~L~-----~~G~~v~vlE~~~~ 36 (292)
T d1k0ia1 1 MKTQVAIIG-AGPSGLLLGQLLH-----KAGIDNVILERQTP 36 (292)
T ss_dssp CBCSEEEEC-CSHHHHHHHHHHH-----HHTCCEEEECSSCH
T ss_pred CCCCEEEEC-cCHHHHHHHHHHH-----HCCCCEEEEeCCCC
Confidence 456799998 6899999999999 68999999998764
|
| >d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.28 E-value=0.075 Score=37.54 Aligned_cols=37 Identities=30% Similarity=0.306 Sum_probs=32.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
.+|++.|+| .|.||+.+++.|. ..|-+|++..+.|.+
T Consensus 23 ~Gk~v~V~G-yG~iG~g~A~~~r-----g~G~~V~v~e~dp~~ 59 (163)
T d1li4a1 23 AGKVAVVAG-YGDVGKGCAQALR-----GFGARVIITEIDPIN 59 (163)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHH-----HTTCEEEEECSCHHH
T ss_pred cCCEEEEec-cccccHHHHHHHH-----hCCCeeEeeecccch
Confidence 479999998 9999999999999 799999999887643
|
| >d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Transcriptional repressor Rex, C-terminal domain domain: Transcriptional repressor Rex, C-terminal domain species: Thermus aquaticus [TaxId: 271]
Probab=92.15 E-value=0.059 Score=36.29 Aligned_cols=37 Identities=27% Similarity=0.299 Sum_probs=28.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEe-CCCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAA-RRPP 49 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~-R~~~ 49 (211)
.+.+++|.| +|..|++|++.+.. +.+|+++++. -++.
T Consensus 2 ~~~~v~I~G-aG~~G~~l~~~l~~----~~~~~iv~fiDdd~~ 39 (126)
T d2dt5a2 2 RKWGLCIVG-MGRLGSALADYPGF----GESFELRGFFDVDPE 39 (126)
T ss_dssp SCEEEEEEC-CSHHHHHHHHCSCC----CSSEEEEEEEESCTT
T ss_pred CCceEEEEc-CCHHHHHHHHhHhh----cCCcEEEEEEeCchH
Confidence 345899998 89999999998875 6789987754 4444
|
| >d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Haemophilus influenzae [TaxId: 727]
Probab=92.14 E-value=0.062 Score=38.12 Aligned_cols=37 Identities=22% Similarity=0.212 Sum_probs=30.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
.+|+|+|.| +|..+++++..|. ..+-+|+++.|+.++
T Consensus 17 ~~k~vlIlG-aGGaarai~~aL~-----~~~~~i~I~nR~~~~ 53 (171)
T d1p77a1 17 PNQHVLILG-AGGATKGVLLPLL-----QAQQNIVLANRTFSK 53 (171)
T ss_dssp TTCEEEEEC-CSHHHHTTHHHHH-----HTTCEEEEEESSHHH
T ss_pred CCCEEEEEC-CcHHHHHHHHHHc-----ccCceeeeccchHHH
Confidence 468899998 6888999999998 456689999998653
|
| >d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Diaminopimelic acid dehydrogenase (DAPDH) species: Corynebacterium glutamicum [TaxId: 1718]
Probab=92.09 E-value=0.11 Score=36.51 Aligned_cols=36 Identities=22% Similarity=0.340 Sum_probs=27.6
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEE-eCCCC
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGA-ARRPP 49 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~-~R~~~ 49 (211)
+-++.|.| +|.+|+.+++.|.+ ..+++++++ +|++.
T Consensus 3 kirvgiiG-~G~ig~~~~~~l~~----~~~~elvav~~~~~~ 39 (170)
T d1f06a1 3 NIRVAIVG-YGNLGRSVEKLIAK----QPDMDLVGIFSRRAT 39 (170)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHTT----CSSEEEEEEEESSSC
T ss_pred cceEEEEC-ChHHHHHHHHHHHh----CCCcEEEEEEecccc
Confidence 34689998 79999999999985 568887755 45543
|
| >d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: 2,4-dienoyl-CoA reductase species: Yeast (Candida tropicalis) [TaxId: 5482]
Probab=91.93 E-value=0.082 Score=37.88 Aligned_cols=37 Identities=19% Similarity=0.070 Sum_probs=30.4
Q ss_pred CCeEEE-EcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 9 KSVALI-IGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 9 ~~~ilV-tGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
+.+++| +||+|.+|...++... ..|.+|+++.|++..
T Consensus 29 g~~vli~~ga~g~vG~~aiqlAk-----~~Ga~vI~~v~~~~~ 66 (189)
T d1gu7a2 29 GKDWFIQNGGTSAVGKYASQIGK-----LLNFNSISVIRDRPN 66 (189)
T ss_dssp TTCEEEESCTTSHHHHHHHHHHH-----HHTCEEEEEECCCTT
T ss_pred CCEEEEEeCCCchHHHHHHHHHh-----hcCCeEEEEEecccc
Confidence 356666 5999999999998887 689999999987654
|
| >d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Putative formate dehydrogenase species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]
Probab=91.91 E-value=0.11 Score=37.34 Aligned_cols=37 Identities=22% Similarity=0.303 Sum_probs=32.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
.+|++.|.| .|-||+.+++.|. .-|.+|++.+|.+..
T Consensus 41 ~gk~vgIiG-~G~IG~~va~~l~-----~~g~~v~~~d~~~~~ 77 (181)
T d1qp8a1 41 QGEKVAVLG-LGEIGTRVGKILA-----ALGAQVRGFSRTPKE 77 (181)
T ss_dssp TTCEEEEES-CSTHHHHHHHHHH-----HTTCEEEEECSSCCC
T ss_pred cCceEEEec-cccccccceeeee-----ccccccccccccccc
Confidence 578999998 8999999999998 689999999987653
|
| >d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, middle domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=91.56 E-value=0.14 Score=37.77 Aligned_cols=36 Identities=31% Similarity=0.322 Sum_probs=32.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
.+|+|+|+| +|..|-..+..|. ..|++|+++.+++.
T Consensus 48 ~~k~VvIIG-aGpAGl~aA~~l~-----~~G~~v~l~E~~~~ 83 (233)
T d1djqa3 48 NKDSVLIVG-AGPSGSEAARVLM-----ESGYTVHLTDTAEK 83 (233)
T ss_dssp SCCEEEEEC-CSHHHHHHHHHHH-----HTTCEEEEECSSSS
T ss_pred CCceEEEEc-ccHHHHHHHHHHH-----HhccceeeEeeccc
Confidence 468999998 8999999999999 69999999988665
|
| >d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=91.36 E-value=0.035 Score=38.81 Aligned_cols=37 Identities=19% Similarity=0.138 Sum_probs=30.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
.+.+++|.|+ |-+|...+..+. ..|.+|+++++++.+
T Consensus 27 ~g~~vlv~G~-G~iG~~a~~~a~-----~~g~~v~~~~~~~~r 63 (168)
T d1rjwa2 27 PGEWVAIYGI-GGLGHVAVQYAK-----AMGLNVVAVDIGDEK 63 (168)
T ss_dssp TTCEEEEECC-STTHHHHHHHHH-----HTTCEEEEECSCHHH
T ss_pred CCCEEEEeec-ccchhhhhHHHh-----cCCCeEeccCCCHHH
Confidence 3578999875 889999888887 688899999987664
|
| >d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=91.23 E-value=0.082 Score=40.73 Aligned_cols=34 Identities=29% Similarity=0.308 Sum_probs=30.2
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
..++|+| +|+.|..++++|. +.|++|.++.+++.
T Consensus 2 ~dv~IIG-aG~sGl~~A~~L~-----~~g~~V~iiEk~~~ 35 (298)
T d1i8ta1 2 YDYIIVG-SGLFGAVCANELK-----KLNKKVLVIEKRNH 35 (298)
T ss_dssp EEEEEEC-CSHHHHHHHHHHG-----GGTCCEEEECSSSS
T ss_pred ccEEEEC-CcHHHHHHHHHHH-----hCCCcEEEEECCCC
Confidence 4689998 8999999999999 68999999988765
|
| >d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=91.17 E-value=0.079 Score=37.78 Aligned_cols=33 Identities=21% Similarity=0.173 Sum_probs=28.8
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCC
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~ 48 (211)
++|.|+| +|-.|.+++..|. +.|++|+.+.|..
T Consensus 1 MkI~ViG-aG~~GtalA~~la-----~~g~~V~l~~r~~ 33 (180)
T d1txga2 1 MIVSILG-AGAMGSALSVPLV-----DNGNEVRIWGTEF 33 (180)
T ss_dssp CEEEEES-CCHHHHHHHHHHH-----HHCCEEEEECCGG
T ss_pred CEEEEEC-CCHHHHHHHHHHH-----HCCCEEEEEEecc
Confidence 3688998 7999999999999 6899999998853
|
| >d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]
Probab=91.06 E-value=0.11 Score=35.83 Aligned_cols=37 Identities=16% Similarity=0.207 Sum_probs=29.1
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
+|+|+|.| .|++|-.++..|.+. ....+|+++.+++.
T Consensus 2 gkrivIvG-gG~~G~e~A~~l~~~---~~~~~Vtlie~~~~ 38 (186)
T d1fcda1 2 GRKVVVVG-GGTGGATAAKYIKLA---DPSIEVTLIEPNTD 38 (186)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHH---CTTSEEEEECSCSC
T ss_pred CCcEEEEC-ccHHHHHHHHHHHHc---CCCCcEEEEECCCc
Confidence 58999998 899999999999831 22357898887653
|
| >d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Trypanothione reductase species: Trypanosoma cruzi [TaxId: 5693]
Probab=91.02 E-value=0.23 Score=32.51 Aligned_cols=38 Identities=16% Similarity=0.101 Sum_probs=28.3
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
+++++|.| +|++|-.++..|.+-. ..+.+|+.+.|.+.
T Consensus 20 p~~v~ivG-gG~ig~E~A~~l~~l~--~~~~~Vtli~~~~~ 57 (117)
T d1aoga2 20 PRRVLTVG-GGFISVEFAGIFNAYK--PKDGQVTLCYRGEM 57 (117)
T ss_dssp CSEEEEEC-SSHHHHHHHHHHHHHC--CTTCEEEEEESSSS
T ss_pred CCeEEEEC-CcHHHHHHHHHhhhcc--cCCcEEEEEeccch
Confidence 57899998 5999999996543100 56788999988655
|
| >d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Transcription corepressor CtbP species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]
Probab=90.89 E-value=0.21 Score=36.08 Aligned_cols=36 Identities=22% Similarity=0.091 Sum_probs=32.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
.+|++.|.| .|-||+.+++.|. .-|.+|++.++...
T Consensus 48 ~gktvgIiG-~G~IG~~va~~l~-----~fg~~v~~~d~~~~ 83 (193)
T d1mx3a1 48 RGETLGIIG-LGRVGQAVALRAK-----AFGFNVLFYDPYLS 83 (193)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHH-----TTTCEEEEECTTSC
T ss_pred eCceEEEec-cccccccceeeee-----ccccceeeccCccc
Confidence 468999998 9999999999999 78999999988654
|
| >d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=90.87 E-value=0.1 Score=36.46 Aligned_cols=34 Identities=29% Similarity=0.505 Sum_probs=26.8
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeC
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAAR 46 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R 46 (211)
|..++|+|.| +|++|-.++..|. +.|.+|.++.+
T Consensus 1 ~~~~~VvIIG-gG~~G~e~A~~l~-----~~g~~v~v~~~ 34 (185)
T d1q1ra1 1 NANDNVVIVG-TGLAGVEVAFGLR-----ASGWEGNIRLV 34 (185)
T ss_dssp CCSCEEEEEC-CSHHHHHHHHHHH-----HTTCCSEEEEE
T ss_pred CCCCCEEEEC-CcHHHHHHHHHHH-----HcCCceEEEEe
Confidence 3467899998 8999999999998 57777555444
|
| >d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, C-terminal domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=90.87 E-value=0.14 Score=35.27 Aligned_cols=36 Identities=22% Similarity=0.053 Sum_probs=29.5
Q ss_pred CCeEEEEc-CCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 9 KSVALIIG-VTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 9 ~~~ilVtG-atG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
++.++|.+ +.||||..++..|. +.|.+|+.+.+.+.
T Consensus 39 ~~~vvi~d~ggg~ig~e~A~~la-----~~G~~Vtlv~~~~~ 75 (156)
T d1djqa2 39 GKRVVILNADTYFMAPSLAEKLA-----TAGHEVTIVSGVHL 75 (156)
T ss_dssp CSEEEEEECCCSSHHHHHHHHHH-----HTTCEEEEEESSCT
T ss_pred CCceEEEecCCChHHHHHHHHHH-----HcCCeEEEEecCCc
Confidence 45666653 57999999999999 79999999998654
|
| >d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Myxococcus xanthus [TaxId: 34]
Probab=90.73 E-value=0.13 Score=38.14 Aligned_cols=33 Identities=24% Similarity=0.319 Sum_probs=29.1
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
+|+|+| +|.-|...+.+|. +.|++|+++.+++.
T Consensus 2 ~V~IIG-aG~aGL~aA~~L~-----~~G~~V~vlE~~~~ 34 (347)
T d2ivda1 2 NVAVVG-GGISGLAVAHHLR-----SRGTDAVLLESSAR 34 (347)
T ss_dssp CEEEEC-CBHHHHHHHHHHH-----TTTCCEEEECSSSS
T ss_pred eEEEEC-CCHHHHHHHHHHH-----hCCCCEEEEecCCC
Confidence 489998 6999999999999 68999999988654
|
| >d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=90.58 E-value=0.045 Score=38.79 Aligned_cols=30 Identities=17% Similarity=0.392 Sum_probs=24.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEE
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYG 43 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~ 43 (211)
|+.+|+|+| +|++|-.++..|. ..|.++.+
T Consensus 2 m~a~VvIIG-gG~~G~e~A~~l~-----~~g~~v~i 31 (183)
T d1d7ya1 2 LKAPVVVLG-AGLASVSFVAELR-----QAGYQGLI 31 (183)
T ss_dssp CCSSEEEEC-CSHHHHHHHHHHH-----HHTCCSCE
T ss_pred CCCCEEEEC-ccHHHHHHHHHHH-----hcCCceEE
Confidence 677899998 9999999999998 45655333
|
| >d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-lactate dehydrogenase species: Lactobacillus helveticus [TaxId: 1587]
Probab=90.52 E-value=0.14 Score=37.19 Aligned_cols=36 Identities=22% Similarity=0.192 Sum_probs=31.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
.+|++.|.| .|-||+.+++.|. .-|.+|++.++...
T Consensus 42 ~gk~vgIiG-~G~IG~~va~~l~-----~fg~~V~~~d~~~~ 77 (197)
T d1j4aa1 42 RDQVVGVVG-TGHIGQVFMQIME-----GFGAKVITYDIFRN 77 (197)
T ss_dssp GGSEEEEEC-CSHHHHHHHHHHH-----HTTCEEEEECSSCC
T ss_pred cCCeEEEec-ccccchhHHHhHh-----hhcccccccCcccc
Confidence 368999998 9999999999998 78999999987543
|
| >d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Probab=90.15 E-value=0.16 Score=35.93 Aligned_cols=37 Identities=22% Similarity=0.343 Sum_probs=30.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCc-EEEEEeCCCCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRPPP 50 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~-~V~~~~R~~~~ 50 (211)
.+.+|+|+|+ |.+|...+..+. ..|. +|+++++++.+
T Consensus 27 ~G~~VlV~Ga-GgvGl~a~~~ak-----~~G~~~Vi~~d~~~~k 64 (174)
T d1p0fa2 27 PGSTCAVFGL-GGVGFSAIVGCK-----AAGASRIIGVGTHKDK 64 (174)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHH-----HHTCSEEEEECSCGGG
T ss_pred CCCEEEEECC-CchhHHHHHHHH-----HcCCceeeccCChHHH
Confidence 3578999995 999999999987 4665 68899887765
|
| >d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Aeropyrum pernix [TaxId: 56636]
Probab=90.15 E-value=0.075 Score=37.42 Aligned_cols=74 Identities=15% Similarity=0.028 Sum_probs=42.9
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCC-cEEEEEeCCCCCCCC--CCCCceeEEEeeCCCHHHHHHHHHhcc-cccc
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSP-WKVYGAARRPPPGWF--PTALVDRYITFDALDPTDTALKLSLIS-QEIT 84 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g-~~V~~~~R~~~~~~~--~~~~~~~~i~~Dl~d~~~~~~~~~~~~-~~~~ 84 (211)
+.+++|.|+ |.+|...+..+. ..| ..|+++++++.+... .....+ ++ |..+ +.+++.++... ..+|
T Consensus 33 g~~vli~Ga-G~vG~~~~~~a~-----~~g~~~vv~~~~~~~k~~~~~~~ga~~-~i--~~~~-~~~~~~~~~~~~~g~d 102 (172)
T d1h2ba2 33 GAYVAIVGV-GGLGHIAVQLLK-----VMTPATVIALDVKEEKLKLAERLGADH-VV--DARR-DPVKQVMELTRGRGVN 102 (172)
T ss_dssp TCEEEEECC-SHHHHHHHHHHH-----HHCCCEEEEEESSHHHHHHHHHTTCSE-EE--ETTS-CHHHHHHHHTTTCCEE
T ss_pred CCEEEEeCC-ChHHHHHHHHHH-----hhcCcccccccchhHHHHHHhhcccce-ee--cCcc-cHHHHHHHhhCCCCce
Confidence 578999985 999999888887 455 457778877654211 112223 33 4333 22333333221 1278
Q ss_pred eEEeeccc
Q 028258 85 NLFWVPLQ 92 (211)
Q Consensus 85 ~v~~~a~~ 92 (211)
.+|.+.+.
T Consensus 103 ~vid~~g~ 110 (172)
T d1h2ba2 103 VAMDFVGS 110 (172)
T ss_dssp EEEESSCC
T ss_pred EEEEecCc
Confidence 88877763
|
| >d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Lysine-specific histone demethylase 1, LSD1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.13 E-value=0.16 Score=38.14 Aligned_cols=35 Identities=31% Similarity=0.403 Sum_probs=30.2
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
+++|+|+| +|.-|-..+.+|. +.|++|+++-++..
T Consensus 5 ~~kViVIG-aG~aGL~aA~~L~-----~~G~~V~VlEa~~r 39 (449)
T d2dw4a2 5 TGKVIIIG-SGVSGLAAARQLQ-----SFGMDVTLLEARDR 39 (449)
T ss_dssp CCEEEEEC-CBHHHHHHHHHHH-----HTTCEEEEECSSSS
T ss_pred CCcEEEEC-CCHHHHHHHHHHH-----hCCCCEEEEeCCCC
Confidence 46799998 8999999999999 68999999976543
|
| >d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: UDP-glucose dehydrogenase (UDPGDH) species: Streptococcus pyogenes [TaxId: 1314]
Probab=90.10 E-value=0.16 Score=36.40 Aligned_cols=32 Identities=28% Similarity=0.266 Sum_probs=25.8
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
+|.|+| .|++|..++..|. .|++|++++-++.
T Consensus 2 kI~ViG-lG~vGl~~a~~~a------~g~~V~g~Din~~ 33 (196)
T d1dlja2 2 KIAVAG-SGYVGLSLGVLLS------LQNEVTIVDILPS 33 (196)
T ss_dssp EEEEEC-CSHHHHHHHHHHT------TTSEEEEECSCHH
T ss_pred EEEEEC-CChhHHHHHHHHH------CCCcEEEEECCHH
Confidence 588887 8999999986443 6999999997653
|
| >d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain species: Escherichia coli [TaxId: 562]
Probab=90.07 E-value=0.2 Score=30.65 Aligned_cols=61 Identities=18% Similarity=0.084 Sum_probs=42.3
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCH--HHHHHHHHh
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDP--TDTALKLSL 78 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~--~~~~~~~~~ 78 (211)
|+|.|.| +|.+|+-++.+-. .-|++|+.++-.++... .....+ ++..++.+- +.+...++.
T Consensus 2 k~vgIlG-~GQLgrMl~~Aa~-----~LG~~v~vldp~~~~pa-~~~a~d-vIT~e~E~~~~~~l~~~la~ 64 (78)
T d3etja2 2 KQVCVLG-NGQLGRMLRQAGE-----PLGIAVWPVGLDAEPAA-VPFQQS-VITAEIERWPETALTRQLAR 64 (78)
T ss_dssp EEEEEEB-CSHHHHHHHHHHG-----GGTEEEEEECTTSCGGG-SCGGGS-EEEESSSCCCCCHHHHHHHT
T ss_pred CEEEEEc-CCHHHHHHHHHHH-----HcCCEEEEEcCCCCCcc-cccccc-eEEEeeccCChHHHHHHHHH
Confidence 7899998 9999999999998 68999999987655321 112335 677766643 234444443
|
| >d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH oxidase /nitrite reductase species: Pyrococcus furiosus [TaxId: 2261]
Probab=89.79 E-value=0.22 Score=34.16 Aligned_cols=32 Identities=28% Similarity=0.529 Sum_probs=26.7
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
+|+|.| .|++|-.++..|. ++++|+++.|.+.
T Consensus 2 rVvIIG-gG~~G~e~A~~l~------~~~~Vtvv~~~~~ 33 (167)
T d1xhca1 2 KVVIVG-NGPGGFELAKQLS------QTYEVTVIDKEPV 33 (167)
T ss_dssp EEEEEC-CSHHHHHHHHHHT------TTSEEEEECSSSS
T ss_pred eEEEEC-CcHHHHHHHHHHH------cCCCEEEEecccc
Confidence 578888 8999999999997 4679999987654
|
| >d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Sarcosine oxidase species: Bacillus sp., strain b0618 [TaxId: 1409]
Probab=88.92 E-value=0.16 Score=38.02 Aligned_cols=34 Identities=18% Similarity=0.209 Sum_probs=29.7
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
..|+|+| +|.+|..++.+|. ++|++|+++.+...
T Consensus 4 yDvvIIG-aGi~Gls~A~~La-----~~G~~V~viE~~~~ 37 (281)
T d2gf3a1 4 FDVIVVG-AGSMGMAAGYQLA-----KQGVKTLLVDAFDP 37 (281)
T ss_dssp EEEEEEC-CSHHHHHHHHHHH-----HTTCCEEEECSSCS
T ss_pred CCEEEEC-cCHHHHHHHHHHH-----HCCCcEEEEeCCCC
Confidence 3589998 8999999999999 68999999998643
|
| >d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: N,N-dimethylglycine oxidase species: Arthrobacter globiformis [TaxId: 1665]
Probab=88.63 E-value=0.16 Score=38.49 Aligned_cols=32 Identities=34% Similarity=0.605 Sum_probs=27.8
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCc-EEEEEeCCC
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRP 48 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~-~V~~~~R~~ 48 (211)
+|+|+| +|.+|..++.+|. ++|+ +|+++.|+.
T Consensus 3 dViIIG-aGi~G~s~A~~La-----~~G~~~V~liE~~~ 35 (305)
T d1pj5a2 3 RIVIIG-AGIVGTNLADELV-----TRGWNNITVLDQGP 35 (305)
T ss_dssp CEEEEC-CSHHHHHHHHHHH-----HTTCCCEEEECSSC
T ss_pred CEEEEC-cCHHHHHHHHHHH-----HcCCCcEEEEeCCC
Confidence 589998 8999999999999 5786 599999864
|
| >d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=88.39 E-value=0.23 Score=35.11 Aligned_cols=37 Identities=24% Similarity=0.380 Sum_probs=31.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCC-cEEEEEeCCCCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSP-WKVYGAARRPPP 50 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g-~~V~~~~R~~~~ 50 (211)
.+.+|+|+|+ |.+|...+..+. ..| .+|+++++++.+
T Consensus 29 ~g~tVlI~G~-GgvGl~ai~~ak-----~~G~~~Vi~vd~~~~k 66 (176)
T d1d1ta2 29 PGSTCVVFGL-GGVGLSVIMGCK-----SAGASRIIGIDLNKDK 66 (176)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHH-----HTTCSEEEEECSCGGG
T ss_pred CCCEEEEECC-CchhHHHHHHHH-----HcCCceEEEecCcHHH
Confidence 4678999985 999999999998 566 579999998776
|
| >d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Phenylalanine dehydrogenase species: Rhodococcus sp., M4 [TaxId: 1831]
Probab=88.38 E-value=0.28 Score=35.65 Aligned_cols=36 Identities=22% Similarity=0.127 Sum_probs=31.1
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCC
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~ 48 (211)
-.+|+++|-| .|-+|+++++.|. +.|.+|++.+.++
T Consensus 25 L~gk~v~IqG-~G~VG~~~A~~L~-----~~Gakvvv~d~d~ 60 (201)
T d1c1da1 25 LDGLTVLVQG-LGAVGGSLASLAA-----EAGAQLLVADTDT 60 (201)
T ss_dssp STTCEEEEEC-CSHHHHHHHHHHH-----HTTCEEEEECSCH
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHH-----HCCCEEEEecchH
Confidence 3578999998 9999999999999 6899999887653
|
| >d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavin-dependent monoxygenase SPBP16F5.08c species: Schizosaccharomyces pombe [TaxId: 4896]
Probab=88.36 E-value=0.37 Score=37.15 Aligned_cols=36 Identities=36% Similarity=0.265 Sum_probs=28.8
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
|+|+|+| +|.-|-..+..|++. ..+++|+++.|+..
T Consensus 5 KrVaIIG-aG~sGl~~A~~L~~~---~~~~~v~vfEk~~~ 40 (335)
T d2gv8a1 5 RKIAIIG-AGPSGLVTAKALLAE---KAFDQVTLFERRGS 40 (335)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHTT---TCCSEEEEECSSSS
T ss_pred CeEEEEC-cCHHHHHHHHHHHHh---CCCCCEEEEECCCC
Confidence 7799998 899999999999830 23378999998764
|
| >d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=88.35 E-value=0.11 Score=36.52 Aligned_cols=37 Identities=24% Similarity=0.344 Sum_probs=27.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCc-EEEEEeCCCCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRPPP 50 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~-~V~~~~R~~~~ 50 (211)
.+.+|+|.|+ |.+|...+..+. ..|. .|+++++++.+
T Consensus 28 ~G~tVlI~Ga-GGvG~~aiq~ak-----~~G~~~vi~~~~~~~k 65 (176)
T d2fzwa2 28 PGSVCAVFGL-GGVGLAVIMGCK-----VAGASRIIGVDINKDK 65 (176)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHH-----HHTCSEEEEECSCGGG
T ss_pred CCCEEEEecc-hhHHHHHHHHHH-----HHhcCceEEEcccHHH
Confidence 3578999997 578999888887 5665 57777776654
|
| >d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Trypanothione reductase species: Crithidia fasciculata [TaxId: 5656]
Probab=88.24 E-value=0.51 Score=30.59 Aligned_cols=40 Identities=20% Similarity=0.097 Sum_probs=30.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
.+++++|.| .|++|-.++..|.+- ...|.+|+.+.|.+..
T Consensus 17 ~p~~v~IiG-gG~ig~E~A~~l~~~--~~~g~~Vtli~~~~~i 56 (117)
T d1feca2 17 APKRALCVG-GGYISIEFAGIFNAY--KARGGQVDLAYRGDMI 56 (117)
T ss_dssp CCSEEEEEC-SSHHHHHHHHHHHHH--SCTTCEEEEEESSSSS
T ss_pred cCCeEEEEC-CChHHHHHHHHhHhh--cccccccceecccccc
Confidence 358899998 899999999764310 0468899999987653
|
| >d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Probab=87.99 E-value=0.32 Score=34.22 Aligned_cols=77 Identities=14% Similarity=-0.004 Sum_probs=45.4
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCc-EEEEEeCCCCCCCC-CCCCceeEEEeeCCC--HHHHHHHHHhcccccc
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRPPPGWF-PTALVDRYITFDALD--PTDTALKLSLISQEIT 84 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~-~V~~~~R~~~~~~~-~~~~~~~~i~~Dl~d--~~~~~~~~~~~~~~~~ 84 (211)
+.+|+|+| .|.||...+..+. ..|. .|++.++++.+... ..-+...++...-.| .....+...+-. +|
T Consensus 29 G~~VlV~G-~G~iGl~a~~~ak-----~~Ga~~Vi~~d~~~~r~~~a~~~Ga~~~i~~~~~~~~~~~~~~~~~~~G--~d 100 (174)
T d1e3ia2 29 GSTCAVFG-LGCVGLSAIIGCK-----IAGASRIIAIDINGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGG--VD 100 (174)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHH-----HTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHHTSC--BS
T ss_pred CCEEEEEC-CChHHHHHHHHHH-----HhCCceeeeeccchHHHHHHHHhCCCcccCCccchhhhhhhHhhhhcCC--Cc
Confidence 57899998 5999999999988 5776 58888887665221 112222032221122 122333333332 78
Q ss_pred eEEeecccC
Q 028258 85 NLFWVPLQV 93 (211)
Q Consensus 85 ~v~~~a~~~ 93 (211)
++|-|++..
T Consensus 101 ~vie~~G~~ 109 (174)
T d1e3ia2 101 YSLDCAGTA 109 (174)
T ss_dssp EEEESSCCH
T ss_pred EEEEecccc
Confidence 998888643
|
| >d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-glycerate dehydrogenase species: Hyphomicrobium methylovorum [TaxId: 84]
Probab=87.87 E-value=0.5 Score=33.88 Aligned_cols=36 Identities=19% Similarity=0.139 Sum_probs=31.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
..+++.|.| .|.||+.+++.|. .-|.+|+..++...
T Consensus 46 ~g~tvgIiG-~G~IG~~va~~l~-----~fg~~v~~~d~~~~ 81 (191)
T d1gdha1 46 DNKTLGIYG-FGSIGQALAKRAQ-----GFDMDIDYFDTHRA 81 (191)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHH-----TTTCEEEEECSSCC
T ss_pred cccceEEee-cccchHHHHHHHH-----hhcccccccccccc
Confidence 368999998 9999999999998 78999999987654
|
| >d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Pyrobaculum islandicum [TaxId: 2277]
Probab=87.16 E-value=0.46 Score=35.45 Aligned_cols=33 Identities=24% Similarity=0.093 Sum_probs=29.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAAR 46 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R 46 (211)
.+++++|-| .|-+|+++++.|. +.|.+|++++-
T Consensus 30 ~g~~v~IqG-fGnVG~~~a~~L~-----~~Gakvv~vsD 62 (242)
T d1v9la1 30 EGKTVAIQG-MGNVGRWTAYWLE-----KMGAKVIAVSD 62 (242)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHH-----TTTCEEEEEEC
T ss_pred CCCEEEEEC-CCHHHHHHHHHHH-----HcCCeEEEeec
Confidence 578999998 9999999999999 68999988763
|
| >d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: HI0933 N-terminal domain-like domain: Flavoprotein BC4706 species: Bacillus cereus [TaxId: 1396]
Probab=86.92 E-value=0.29 Score=35.77 Aligned_cols=36 Identities=22% Similarity=0.135 Sum_probs=31.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
|+..|+|+| +|..|...+..|. +.|++|+++.+++.
T Consensus 1 M~yDViIIG-aG~aGl~aA~~la-----~~G~~V~liEk~~~ 36 (251)
T d2i0za1 1 MHYDVIVIG-GGPSGLMAAIGAA-----EEGANVLLLDKGNK 36 (251)
T ss_dssp CCCSEEEEC-CSHHHHHHHHHHH-----HTTCCEEEECSSSS
T ss_pred CcCCEEEEC-cCHHHHHHHHHHH-----HCCCcEEEEeCCCC
Confidence 456799998 8999999999999 68999999998754
|
| >d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Escherichia coli [TaxId: 562]
Probab=86.89 E-value=0.46 Score=33.38 Aligned_cols=35 Identities=20% Similarity=0.122 Sum_probs=30.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~ 47 (211)
.+|+++|.|.|..+|+-++..|. .+|..|+.+..+
T Consensus 36 ~GK~v~VIGrS~~VG~Pla~lL~-----~~gatVt~~h~~ 70 (166)
T d1b0aa1 36 FGLNAVVIGASNIVGRPMSMELL-----LAGCTTTVTHRF 70 (166)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHH-----TTTCEEEEECSS
T ss_pred ccceEEEEeccccccHHHHHHHH-----Hhhccccccccc
Confidence 47999999999999999999999 688999887654
|
| >d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=86.67 E-value=0.56 Score=33.31 Aligned_cols=36 Identities=14% Similarity=0.021 Sum_probs=31.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
.+|++.|.| .|.||+.+++.|. .-|.+|++.+|...
T Consensus 43 ~~k~vgiiG-~G~IG~~va~~~~-----~fg~~v~~~d~~~~ 78 (184)
T d1ygya1 43 FGKTVGVVG-LGRIGQLVAQRIA-----AFGAYVVAYDPYVS 78 (184)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHH-----TTTCEEEEECTTSC
T ss_pred cceeeeecc-ccchhHHHHHHhh-----hccceEEeecCCCC
Confidence 467888987 9999999999998 68899999987654
|
| >d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Formaldehyde dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=86.66 E-value=0.21 Score=35.98 Aligned_cols=76 Identities=17% Similarity=0.020 Sum_probs=43.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCC-CCCCceeEEEeeCCCHH---HHHHHHHhccccc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF-PTALVDRYITFDALDPT---DTALKLSLISQEI 83 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~-~~~~~~~~i~~Dl~d~~---~~~~~~~~~~~~~ 83 (211)
.+.+|||+|| |.+|...+..+.. ....+|+++++++.+... ..-+.. .+ .|..+.+ .+.+...+.. +
T Consensus 25 ~G~tVlV~Ga-G~vGl~a~~~ak~----~ga~~Vi~~d~~~~rl~~a~~~Ga~-~~-~~~~~~~~~~~i~~~t~g~g--~ 95 (195)
T d1kola2 25 PGSTVYVAGA-GPVGLAAAASARL----LGAAVVIVGDLNPARLAHAKAQGFE-IA-DLSLDTPLHEQIAALLGEPE--V 95 (195)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHH----TTCSEEEEEESCHHHHHHHHHTTCE-EE-ETTSSSCHHHHHHHHHSSSC--E
T ss_pred CCCEEEEECc-CHHHHHHHHHHHh----hcccceeeecccchhhHhhhhcccc-EE-EeCCCcCHHHHHHHHhCCCC--c
Confidence 3578999985 9999888877752 233478889887654211 112333 32 2333332 2222222222 7
Q ss_pred ceEEeeccc
Q 028258 84 TNLFWVPLQ 92 (211)
Q Consensus 84 ~~v~~~a~~ 92 (211)
|.+|.+.+.
T Consensus 96 D~vid~vG~ 104 (195)
T d1kola2 96 DCAVDAVGF 104 (195)
T ss_dssp EEEEECCCT
T ss_pred EEEEECccc
Confidence 888888764
|
| >d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavin-dependent monoxygenase SPBP16F5.08c species: Schizosaccharomyces pombe [TaxId: 4896]
Probab=86.60 E-value=0.42 Score=30.67 Aligned_cols=37 Identities=14% Similarity=-0.002 Sum_probs=28.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
.+|+|+|.| +|..|..++..|.+ ..-+++.+.|+...
T Consensus 31 ~gK~VlVVG-~g~Sa~dia~~l~~-----~ak~v~~~~~r~~~ 67 (107)
T d2gv8a2 31 VGESVLVVG-GASSANDLVRHLTP-----VAKHPIYQSLLGGG 67 (107)
T ss_dssp TTCCEEEEC-SSHHHHHHHHHHTT-----TSCSSEEEECTTCC
T ss_pred CCCeEEEEC-CCCCHHHHHHHHHH-----hcCEEEEEEecCcc
Confidence 468999998 88999999999983 44455656666543
|
| >d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Cholesterol oxidase of GMC family species: Streptomyces sp. [TaxId: 1931]
Probab=86.43 E-value=0.26 Score=38.40 Aligned_cols=30 Identities=23% Similarity=0.169 Sum_probs=27.4
Q ss_pred EEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCC
Q 028258 12 ALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (211)
Q Consensus 12 ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~ 47 (211)
|+|+| +|+-|..++.+|. +.|++|.++-|-
T Consensus 5 VIVVG-sG~aG~v~A~rLa-----eaG~~VlvLEaG 34 (367)
T d1n4wa1 5 AVVIG-TGYGAAVSALRLG-----EAGVQTLMLEMG 34 (367)
T ss_dssp EEEEC-CSHHHHHHHHHHH-----HTTCCEEEEESS
T ss_pred EEEeC-cCHHHHHHHHHHH-----HCcCeEEEEecC
Confidence 78998 9999999999999 689999999873
|
| >d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: L-alanine dehydrogenase species: Phormidium lapideum [TaxId: 32060]
Probab=86.17 E-value=0.22 Score=35.18 Aligned_cols=75 Identities=13% Similarity=0.020 Sum_probs=52.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-CCCCCceeEEEeeCCCHHHHHHHHHhcccccceE
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-FPTALVDRYITFDALDPTDTALKLSLISQEITNL 86 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v 86 (211)
.+.+++|+| .|-.|.+-++.+. .-|.+|++++.++.... ....... .+..-..+.+.+.+.++. .|.|
T Consensus 31 ~pa~V~ViG-aGvaG~~A~~~A~-----~lGA~V~~~D~~~~~l~~l~~~~~~-~~~~~~~~~~~l~~~~~~----aDiv 99 (168)
T d1pjca1 31 KPGKVVILG-GGVVGTEAAKMAV-----GLGAQVQIFDINVERLSYLETLFGS-RVELLYSNSAEIETAVAE----ADLL 99 (168)
T ss_dssp CCCEEEEEC-CSHHHHHHHHHHH-----HTTCEEEEEESCHHHHHHHHHHHGG-GSEEEECCHHHHHHHHHT----CSEE
T ss_pred CCcEEEEEC-CChHHHHHHHHHh-----hCCCEEEEEeCcHHHHHHHHHhhcc-cceeehhhhhhHHHhhcc----CcEE
Confidence 367899998 8999999999988 68899999999876421 0000111 233445677778888886 4777
Q ss_pred EeecccC
Q 028258 87 FWVPLQV 93 (211)
Q Consensus 87 ~~~a~~~ 93 (211)
|.++...
T Consensus 100 I~aalip 106 (168)
T d1pjca1 100 IGAVLVP 106 (168)
T ss_dssp EECCCCT
T ss_pred EEeeecC
Confidence 7776554
|
| >d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Formate dehydrogenase species: Pseudomonas sp., strain 101 [TaxId: 306]
Probab=86.12 E-value=0.54 Score=33.45 Aligned_cols=36 Identities=14% Similarity=0.039 Sum_probs=31.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
..+++.|.| .|-||+.+++.|. .-|.+|...+|...
T Consensus 43 ~~~~vgiiG-~G~IG~~va~~l~-----~fg~~v~~~d~~~~ 78 (188)
T d2naca1 43 EAMHVGTVA-AGRIGLAVLRRLA-----PFDVHLHYTDRHRL 78 (188)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHG-----GGTCEEEEECSSCC
T ss_pred cccceeecc-ccccchhhhhhhh-----ccCceEEEEeeccc
Confidence 467899998 9999999999998 68899999998654
|
| >d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]
Probab=85.51 E-value=0.35 Score=33.90 Aligned_cols=36 Identities=28% Similarity=0.358 Sum_probs=32.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
.+|+++|.| -|.+|+.++++|. ..|-+|+++..+|-
T Consensus 22 aGk~vvV~G-YG~vGrG~A~~~r-----g~Ga~V~V~E~DPi 57 (163)
T d1v8ba1 22 SGKIVVICG-YGDVGKGCASSMK-----GLGARVYITEIDPI 57 (163)
T ss_dssp TTSEEEEEC-CSHHHHHHHHHHH-----HHTCEEEEECSCHH
T ss_pred cCCEEEEec-ccccchhHHHHHH-----hCCCEEEEEecCch
Confidence 479999998 9999999999999 78999999987764
|
| >d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Polyamine oxidase species: Maize (Zea mays) [TaxId: 4577]
Probab=85.35 E-value=0.32 Score=34.80 Aligned_cols=33 Identities=21% Similarity=0.345 Sum_probs=28.3
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCc-EEEEEeCCCC
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRPP 49 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~-~V~~~~R~~~ 49 (211)
+|+|+| +|..|...+.+|. +.|+ +|+++.+++.
T Consensus 2 ~V~IIG-aG~aGL~aA~~L~-----~~G~~~V~vlE~~~~ 35 (347)
T d1b5qa1 2 RVIVVG-AGMSGISAAKRLS-----EAGITDLLILEATDH 35 (347)
T ss_dssp CEEEEC-CBHHHHHHHHHHH-----HTTCCCEEEECSSSS
T ss_pred CEEEEC-CcHHHHHHHHHHH-----hCCCCcEEEEECCCC
Confidence 588998 8999999999999 6887 5999988654
|
| >d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Apoptosis-inducing factor (AIF) species: Human (Homo sapiens) [TaxId: 9606]
Probab=85.28 E-value=0.41 Score=32.17 Aligned_cols=39 Identities=26% Similarity=0.148 Sum_probs=28.7
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
.++++|.| .|++|-.++..|.+.. +..|.+|+.+.+.+.
T Consensus 37 ~k~i~IvG-gG~~G~E~A~~l~~~~-~~~g~~Vt~i~~~~~ 75 (137)
T d1m6ia2 37 VKSITIIG-GGFLGSELACALGRKA-RALGTEVIQLFPEKG 75 (137)
T ss_dssp CSEEEEEC-CSHHHHHHHHHHHHHH-HHHTCEEEEECSSSS
T ss_pred CCEEEEEC-CCHHHHHHHHHHHHHH-HhcCCEEEEeccccc
Confidence 47899998 7999999998885100 035789998887654
|
| >d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=84.80 E-value=0.64 Score=32.69 Aligned_cols=33 Identities=21% Similarity=0.208 Sum_probs=27.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEe
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAA 45 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~ 45 (211)
|+.+|.|-| .|-||+.+++.|.+ ....+|+++.
T Consensus 1 M~irIaING-fGRIGR~v~Ral~~----~~dieiVaIN 33 (172)
T d2czca2 1 MKVKVGVNG-YGTIGKRVAYAVTK----QDDMELIGIT 33 (172)
T ss_dssp CCEEEEEEC-CSHHHHHHHHHHHT----CTTEEEEEEE
T ss_pred CcEEEEEEC-CCHHHHHHHHHHHh----CCCceEEEEe
Confidence 567899998 89999999999985 4668877664
|
| >d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Pyranose 2-oxidase species: White-rot fungus (Peniophora sp. SG) [TaxId: 204723]
Probab=84.61 E-value=0.36 Score=37.29 Aligned_cols=34 Identities=29% Similarity=0.314 Sum_probs=29.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~ 47 (211)
++-.++|+| +|.-|.-++.+|. +.|++|+++-+-
T Consensus 3 ~~yDviIVG-sG~aG~v~A~~La-----~~G~kVlvLEaG 36 (379)
T d2f5va1 3 IKYDVVIVG-SGPIGCTYARELV-----GAGYKVAMFDIG 36 (379)
T ss_dssp SEEEEEEEC-CSHHHHHHHHHHH-----HTTCEEEEECSS
T ss_pred CcccEEEEC-cCHHHHHHHHHHh-----hCCCeEEEEecC
Confidence 345699998 9999999999999 689999999763
|
| >d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Monoamine oxidase B species: Human (Homo sapiens) [TaxId: 9606]
Probab=84.44 E-value=0.4 Score=36.30 Aligned_cols=32 Identities=31% Similarity=0.457 Sum_probs=28.4
Q ss_pred EEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 12 ALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 12 ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
|+|+| +|..|...+.+|. +.|++|+++.++..
T Consensus 2 ViVIG-aG~aGL~aA~~L~-----~~G~~V~VlE~~~~ 33 (383)
T d2v5za1 2 VVVVG-GGISGMAAAKLLH-----DSGLNVVVLEARDR 33 (383)
T ss_dssp EEEEC-CBHHHHHHHHHHH-----HTTCCEEEEESSSS
T ss_pred EEEEC-CCHHHHHHHHHHH-----hCCCCEEEEecCCC
Confidence 78998 8999999999999 68999999987653
|
| >d1lc0a1 c.2.1.3 (A:2-128,A:247-291) Biliverdin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Biliverdin reductase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=84.17 E-value=0.47 Score=33.03 Aligned_cols=21 Identities=24% Similarity=0.374 Sum_probs=17.6
Q ss_pred CeEEEEcCCChHHHHHHHHhhC
Q 028258 10 SVALIIGVTGISGLSLAEALKN 31 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~ 31 (211)
-+|.|+| +|.+|+..++.|.+
T Consensus 8 ~kv~iIG-~G~~g~~h~~~l~~ 28 (172)
T d1lc0a1 8 FGVVVVG-VGRAGSVRLRDLKD 28 (172)
T ss_dssp EEEEEEC-CSHHHHHHHHHHTS
T ss_pred cEEEEEc-CCHHHHHHHHHHHh
Confidence 3799998 69999999988873
|
| >d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale cress(Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Thi4-like domain: Thiazole biosynthetic enzyme Thi4 species: Thale cress(Arabidopsis thaliana) [TaxId: 3702]
Probab=84.17 E-value=0.19 Score=37.87 Aligned_cols=36 Identities=19% Similarity=0.285 Sum_probs=30.3
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
...|+|+| +|.-|...+.+|.+ ..|++|.++.+++.
T Consensus 33 e~DViVIG-aGpaGL~aA~~LA~----~~G~~V~vlE~~~~ 68 (278)
T d1rp0a1 33 ETDVVVVG-AGSAGLSAAYEISK----NPNVQVAIIEQSVS 68 (278)
T ss_dssp EEEEEEEC-CSHHHHHHHHHHHT----STTSCEEEEESSSS
T ss_pred CCCEEEEC-CCHHHHHHHHHHHH----ccCCeEEEEecCCC
Confidence 34699999 59999999999983 35999999998765
|
| >d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=84.01 E-value=0.78 Score=32.28 Aligned_cols=36 Identities=22% Similarity=0.213 Sum_probs=31.1
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCC
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~ 47 (211)
-.+|++.|+|.|.-+|+-++..|+ .+|..|+.+..+
T Consensus 27 l~GK~vvVIGrS~iVG~Pla~lL~-----~~gaTVt~~~~~ 62 (171)
T d1edza1 27 LYGKKCIVINRSEIVGRPLAALLA-----NDGATVYSVDVN 62 (171)
T ss_dssp TTTCEEEEECCCTTTHHHHHHHHH-----TTSCEEEEECSS
T ss_pred CCCCEEEEECCccccHHHHHHHHH-----HCCCEEEEeccc
Confidence 357999999999999999999999 688889877643
|
| >d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Cow (Bos taurus) [TaxId: 9913]
Probab=83.87 E-value=0.61 Score=35.81 Aligned_cols=32 Identities=19% Similarity=0.091 Sum_probs=28.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEe
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAA 45 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~ 45 (211)
.+++++|-| .|-+|+++++.|. +.|.+|++++
T Consensus 35 ~gktvaIqG-fGnVG~~~A~~L~-----e~Gakvv~vs 66 (293)
T d1hwxa1 35 GDKTFAVQG-FGNVGLHSMRYLH-----RFGAKCVAVG 66 (293)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHH-----HTTCEEEEEE
T ss_pred CCCEEEEEC-CCHHHHHHHHHHH-----HCCCEEEEEE
Confidence 468999998 8999999999999 6899988875
|
| >d1fmta2 c.65.1.1 (A:1-206) Methionyl-tRNAfmet formyltransferase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Formyltransferase superfamily: Formyltransferase family: Formyltransferase domain: Methionyl-tRNAfmet formyltransferase species: Escherichia coli [TaxId: 562]
Probab=83.40 E-value=2.8 Score=29.80 Aligned_cols=73 Identities=15% Similarity=0.073 Sum_probs=45.3
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC-------CC-------CCCCceeEEEeeCCCHHHHHH
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-------WF-------PTALVDRYITFDALDPTDTAL 74 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~-------~~-------~~~~~~~~i~~Dl~d~~~~~~ 74 (211)
+++|+++| |+..+..+.+.|+ +.+++|.++.-.+++. .. ...++. .......+.+...+
T Consensus 3 ~mKI~f~G-~~~~~~~~L~~L~-----~~~~~i~~Vit~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 75 (206)
T d1fmta2 3 SLRIIFAG-TPDFAARHLDALL-----SSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLP-VFQPVSLRPQENQQ 75 (206)
T ss_dssp CCEEEEEE-CSHHHHHHHHHHH-----HTTCEEEEEECCCCBC------CBCCHHHHHHHHTTCC-EECCSCSCSHHHHH
T ss_pred CcEEEEEC-CCHHHHHHHHHHH-----hCCCCEEEEEeCCCcccccCccccccchhhhhhccCcc-ccccccccchhhHH
Confidence 34588887 7889999999999 5789977654333210 00 013455 55555555566677
Q ss_pred HHHhcccccceEEeec
Q 028258 75 KLSLISQEITNLFWVP 90 (211)
Q Consensus 75 ~~~~~~~~~~~v~~~a 90 (211)
.++..+ +|.++.+.
T Consensus 76 ~~~~~~--~d~~v~~~ 89 (206)
T d1fmta2 76 LVAELQ--ADVMVVVA 89 (206)
T ss_dssp HHHHTT--CSEEEEES
T ss_pred HHhhhc--ceEEEeec
Confidence 777765 67655443
|
| >d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Formyltransferase superfamily: Formyltransferase family: Formyltransferase domain: Polymyxin resistance protein ArnA, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=83.40 E-value=1.5 Score=31.34 Aligned_cols=70 Identities=10% Similarity=0.073 Sum_probs=42.0
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC----CCC-------CCCCceeEEE-eeCCCHHHHHHHHHh
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP----GWF-------PTALVDRYIT-FDALDPTDTALKLSL 78 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~----~~~-------~~~~~~~~i~-~Dl~d~~~~~~~~~~ 78 (211)
+++|+| ++..|..+++.|+ +.|++|.++.-.++. .+. ...++. ++. -++.+++ +.+.++.
T Consensus 2 kiv~~~-~~~~g~~~l~~L~-----~~g~~I~~Vvt~~~~~~~~~~~~~~~~~a~~~~i~-~~~~~~~~~~~-~~~~i~~ 73 (203)
T d2blna2 2 KTVVFA-YHDMGCLGIEALL-----AAGYEISAIFTHTDNPGEKAFYGSVARLAAERGIP-VYAPDNVNHPL-WVERIAQ 73 (203)
T ss_dssp EEEEEE-CHHHHHHHHHHHH-----HTTCEEEEEECCCC------CCCCHHHHHHHHTCC-EECCSCCCSHH-HHHHHHH
T ss_pred eEEEEe-cCHHHHHHHHHHH-----HCCCCEEEEEcCCCCCCcccccCHHHHHHHHcCCc-ceecccccchh-hhhhhhh
Confidence 467776 6668999999999 688998765432221 111 123455 443 4555544 4555666
Q ss_pred cccccceEEeec
Q 028258 79 ISQEITNLFWVP 90 (211)
Q Consensus 79 ~~~~~~~v~~~a 90 (211)
.+ +|.++.+.
T Consensus 74 ~~--~Dlii~~g 83 (203)
T d2blna2 74 LS--PDVIFSFY 83 (203)
T ss_dssp TC--CSEEEEES
T ss_pred hc--ccceeeee
Confidence 54 67766554
|
| >d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Monooxygenase PhzS species: Pseudomonas aeruginosa [TaxId: 287]
Probab=83.34 E-value=0.75 Score=33.63 Aligned_cols=35 Identities=37% Similarity=0.292 Sum_probs=29.5
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCc-EEEEEeCCCCC
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRPPP 50 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~-~V~~~~R~~~~ 50 (211)
-+|+|+| .|..|..++..|. ..|+ +|.++.|++..
T Consensus 2 ~~V~IvG-aG~aGl~~A~~L~-----~~Gi~~V~V~Er~~~~ 37 (288)
T d3c96a1 2 IDILIAG-AGIGGLSCALALH-----QAGIGKVTLLESSSEI 37 (288)
T ss_dssp CEEEEEC-CSHHHHHHHHHHH-----HTTCSEEEEEESSSSC
T ss_pred CEEEEEC-cCHHHHHHHHHHH-----hCCCCeEEEEeCCCCC
Confidence 4689998 8999999999998 5885 89999987653
|
| >d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=83.14 E-value=0.71 Score=32.49 Aligned_cols=35 Identities=17% Similarity=0.209 Sum_probs=31.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~ 47 (211)
.+|++.|.|.|..+|+-++..|. .+|..|+.+...
T Consensus 38 ~Gk~vvVIGrS~iVGrPLa~lL~-----~~gatVt~~~~~ 72 (170)
T d1a4ia1 38 AGRHAVVVGRSKIVGAPMHDLLL-----WNNATVTTCHSK 72 (170)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHH-----HTTCEEEEECTT
T ss_pred ccceEEEEecCCccchHHHHHHH-----hccCceEEEecc
Confidence 47999999999999999999999 688889887654
|
| >d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Molybdenum cofactor biosynthesis protein MoeB domain: Molybdenum cofactor biosynthesis protein MoeB species: Escherichia coli [TaxId: 562]
Probab=83.13 E-value=0.37 Score=35.69 Aligned_cols=33 Identities=21% Similarity=0.134 Sum_probs=27.2
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcE-EEEEeCC
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWK-VYGAARR 47 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~-V~~~~R~ 47 (211)
+++|+|.| .|.+|++++..|. ..|.. +++++.+
T Consensus 30 ~~~VliiG-~GglGs~va~~La-----~~Gvg~i~lvD~D 63 (247)
T d1jw9b_ 30 DSRVLIVG-LGGLGCAASQYLA-----SAGVGNLTLLDFD 63 (247)
T ss_dssp HCEEEEEC-CSHHHHHHHHHHH-----HHTCSEEEEECCC
T ss_pred CCCEEEEC-CCHHHHHHHHHHH-----HcCCCeEEEECCc
Confidence 57899999 8889999999999 57764 7777754
|
| >d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Thermotoga maritima [TaxId: 2336]
Probab=82.67 E-value=1.2 Score=27.69 Aligned_cols=69 Identities=13% Similarity=0.045 Sum_probs=41.9
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC--CCCCCceeEEEe-eCCCHHHHHHHHHhcccccceE
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW--FPTALVDRYITF-DALDPTDTALKLSLISQEITNL 86 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~--~~~~~~~~~i~~-Dl~d~~~~~~~~~~~~~~~~~v 86 (211)
++|.++|-.|-==++|++.|+ +.||.|.+.++++.... +...+++ +..+ |..+ +.. +|.|
T Consensus 2 ~~ihfiGIgG~GMs~LA~~L~-----~~G~~VsGSD~~~~~~t~~L~~~Gi~-i~~gh~~~~----------i~~-~d~v 64 (89)
T d1j6ua1 2 MKIHFVGIGGIGMSAVALHEF-----SNGNDVYGSNIEETERTAYLRKLGIP-IFVPHSADN----------WYD-PDLV 64 (89)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-----HTTCEEEEECSSCCHHHHHHHHTTCC-EESSCCTTS----------CCC-CSEE
T ss_pred cEEEEEeECHHHHHHHHHHHH-----hCCCeEEEEeCCCChhHHHHHHCCCe-EEeeecccc----------cCC-CCEE
Confidence 457778855544457888888 79999999998764311 2234455 4322 2211 122 6777
Q ss_pred EeecccCCc
Q 028258 87 FWVPLQVQE 95 (211)
Q Consensus 87 ~~~a~~~~~ 95 (211)
+...+....
T Consensus 65 V~SsAI~~~ 73 (89)
T d1j6ua1 65 IKTPAVRDD 73 (89)
T ss_dssp EECTTCCTT
T ss_pred EEecCcCCC
Confidence 777776544
|
| >d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=82.19 E-value=1.2 Score=31.31 Aligned_cols=35 Identities=14% Similarity=0.143 Sum_probs=27.3
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
+|+|.| +|++|-.++..|.+. ..+.+|+.+.|++.
T Consensus 2 KVvIIG-gG~~G~e~A~~l~~~---~~~~~V~v~~~~~~ 36 (198)
T d1nhpa1 2 KVIVLG-SSHGGYEAVEELLNL---HPDAEIQWYEKGDF 36 (198)
T ss_dssp EEEEEC-SSHHHHHHHHHHHHH---CTTSEEEEEESSSS
T ss_pred EEEEEC-CcHHHHHHHHHHHhc---CCCCeEEEEeCCCc
Confidence 588888 789999999999631 34678998888654
|
| >d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Clostridium symbiosum [TaxId: 1512]
Probab=81.95 E-value=0.53 Score=35.43 Aligned_cols=32 Identities=16% Similarity=0.044 Sum_probs=28.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEe
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAA 45 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~ 45 (211)
++++++|-| .|-+|+++++.|. +.|.+|++++
T Consensus 35 ~g~~v~IQG-fGnVG~~~a~~L~-----e~Gakvvavs 66 (255)
T d1bgva1 35 VGKTVALAG-FGNVAWGAAKKLA-----ELGAKAVTLS 66 (255)
T ss_dssp TTCEEEECC-SSHHHHHHHHHHH-----HHTCEEEEEE
T ss_pred CCCEEEEEC-CCHHHHHHHHHHH-----HcCCeEEEEe
Confidence 468999998 8999999999999 7899988775
|
| >d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: HI0933 N-terminal domain-like domain: Hypothetical protein HI0933 species: Haemophilus influenzae [TaxId: 727]
Probab=81.63 E-value=0.41 Score=35.30 Aligned_cols=34 Identities=29% Similarity=0.222 Sum_probs=29.8
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
..|+|+| .|..|...+..|. +.|.+|.++.+.+.
T Consensus 5 ~DViIIG-aG~aGl~aA~~la-----~~G~~V~vlEk~~~ 38 (253)
T d2gqfa1 5 SENIIIG-AGAAGLFCAAQLA-----KLGKSVTVFDNGKK 38 (253)
T ss_dssp CSEEEEC-CSHHHHHHHHHHH-----HTTCCEEEECSSSS
T ss_pred CcEEEEC-cCHHHHHHHHHHH-----HCCCcEEEEecCCC
Confidence 4599998 8999999999999 68999999998765
|
| >d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Peptidoglycan biosynthesis glycosyltransferase MurG domain: Peptidoglycan biosynthesis glycosyltransferase MurG species: Escherichia coli [TaxId: 562]
Probab=81.50 E-value=0.63 Score=35.30 Aligned_cols=32 Identities=25% Similarity=0.397 Sum_probs=20.5
Q ss_pred CeEEEEc-CCC-hH--HHHHHHHhhCCCCCCCCcEEEEEeC
Q 028258 10 SVALIIG-VTG-IS--GLSLAEALKNPTTPGSPWKVYGAAR 46 (211)
Q Consensus 10 ~~ilVtG-atG-~i--G~~l~~~L~~~~~~~~g~~V~~~~R 46 (211)
|+|||++ ||| -+ ..+|+++|. ++||+|..+..
T Consensus 1 kkili~~~GtGGHv~~a~al~~~L~-----~~G~eV~~i~~ 36 (351)
T d1f0ka_ 1 KRLMVMAGGTGGHVFPGLAVAHHLM-----AQGWQVRWLGT 36 (351)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHH-----TTTCEEEEEEC
T ss_pred CEEEEEcCCcHHHHHHHHHHHHHHH-----hCCCEEEEEEe
Confidence 4566655 342 22 224788898 68999987764
|
| >d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Nitrogenase iron protein-like domain: Dethiobiotin synthetase species: Escherichia coli [TaxId: 562]
Probab=81.23 E-value=0.3 Score=34.80 Aligned_cols=31 Identities=19% Similarity=0.278 Sum_probs=23.7
Q ss_pred CeEEEEcCCChHHHH-----HHHHhhCCCCCCCCcEEEEEe
Q 028258 10 SVALIIGVTGISGLS-----LAEALKNPTTPGSPWKVYGAA 45 (211)
Q Consensus 10 ~~ilVtGatG~iG~~-----l~~~L~~~~~~~~g~~V~~~~ 45 (211)
|+++|||-..++|+. |+..|. ++|++|..++
T Consensus 2 ~~~~i~gt~~GVGKTtvs~~La~aLa-----~~G~rVl~id 37 (224)
T d1byia_ 2 KRYFVTGTDTEVGKTVASCALLQAAK-----AAGYRTAGYK 37 (224)
T ss_dssp EEEEEEESSTTSCHHHHHHHHHHHHH-----HTTCCEEEEC
T ss_pred ceEEEEECCCCccHHHHHHHHHHHHH-----HCCCeEEEEC
Confidence 789999843388875 566677 6999999876
|
| >d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Leucine dehydrogenase species: Bacillus sphaericus [TaxId: 1421]
Probab=81.01 E-value=1.2 Score=32.86 Aligned_cols=36 Identities=14% Similarity=0.028 Sum_probs=31.0
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCC
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~ 48 (211)
-.+++++|-| .|-+|+++++.|. +.|.+|++.+-++
T Consensus 37 l~g~~v~IqG-~GnVG~~~a~~L~-----~~Gakvv~~d~~~ 72 (230)
T d1leha1 37 LEGLAVSVQG-LGNVAKALCKKLN-----TEGAKLVVTDVNK 72 (230)
T ss_dssp CTTCEEEEEC-CSHHHHHHHHHHH-----HTTCEEEEECSCH
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHH-----HCCCEEEeecccH
Confidence 3578999998 9999999999999 7999999877543
|
| >d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Phenylacetone monooxygenase species: Thermobifida fusca [TaxId: 2021]
Probab=80.62 E-value=0.71 Score=35.29 Aligned_cols=34 Identities=24% Similarity=0.209 Sum_probs=29.8
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
-.|+|+| .|..|-..+..|. +.|.+|+++.+++.
T Consensus 8 ~dV~IIG-AG~sGl~~a~~L~-----~~G~~v~i~Ek~~~ 41 (298)
T d1w4xa1 8 VDVLVVG-AGFSGLYALYRLR-----ELGRSVHVIETAGD 41 (298)
T ss_dssp EEEEEEC-CSHHHHHHHHHHH-----HTTCCEEEECSSSS
T ss_pred CCEEEEC-ccHHHHHHHHHHH-----hCCCCEEEEEcCCC
Confidence 3599998 8999999999999 68999999998654
|
| >d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=80.60 E-value=1 Score=33.34 Aligned_cols=33 Identities=24% Similarity=0.257 Sum_probs=27.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEe
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAA 45 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~ 45 (211)
.+++++|-| .|-+|+++++.|.+ +.|..|++++
T Consensus 31 ~g~~v~IqG-fGnVG~~~a~~L~~----~~G~kvv~vs 63 (239)
T d1gtma1 31 KGKTIAIQG-YGNAGYYLAKIMSE----DFGMKVVAVS 63 (239)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHH----TTCCEEEEEE
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHH----hcCcceeecc
Confidence 568999998 89999999999973 4688888775
|
| >d3coxa1 c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of GMC family {Brevibacterium sterolicum [TaxId: 1702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Cholesterol oxidase of GMC family species: Brevibacterium sterolicum [TaxId: 1702]
Probab=80.31 E-value=0.59 Score=36.31 Aligned_cols=30 Identities=27% Similarity=0.232 Sum_probs=27.3
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeC
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAAR 46 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R 46 (211)
-|+|+| +|+-|..++.+|. +.|++|.++-|
T Consensus 9 dvIVVG-sG~aG~v~A~rLa-----eaG~~VlvLEa 38 (370)
T d3coxa1 9 PALVIG-SGYGGAVAALRLT-----QAGIPTQIVEM 38 (370)
T ss_dssp EEEEEC-CSHHHHHHHHHHH-----HTTCCEEEECS
T ss_pred CEEEEC-cCHHHHHHHHHHH-----HCCCeEEEEeC
Confidence 489998 9999999999999 68999999986
|