Citrus Sinensis ID: 028451


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------21
MSDLKLRPEISFAQTFLCSAFAACFAELCTIPLDTAKVRLQLQKKTASGDGVSVSKYRGLMGTVVTIAREEGLWALWNGVIAGLHRQCIYGGLRIGLYDPVKTFLVGSDFVGDIPLYQKIFAALLTGAIAIVVANPTDLVKVRLQAEGKLPSGVPRRYYGALDAYCTIVRQEGLGALWTGLGPNIARNAIVNAAELASYDQVKEVNSLH
cccccccccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHcHHHEEHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHccHHHHHHHHHccccccccccccccccHHHHHHHHHHHHcHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHcc
cccccccccccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHccccccccccccHcccHHHHHHHHHHHccHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHcccccccccHcccHHHHHHHHHHHcccHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHcc
msdlklrpeisFAQTFLCSAFAACFAELCTIPLDTAKVRLQLQKktasgdgvsvskyrgLMGTVVTIAREEGLWALWNGVIAGLHRQCIYgglriglydpvktflvgsdfvgdiPLYQKIFAALLTGAIAIVVANPTDLVKVRLQAegklpsgvprryygalDAYCTIVRQEGLGalwtglgpniaRNAIVNAAELasydqvkevnslh
MSDLKLRPEISFAQTFLCSAFAACFAELCTIPLDTAKVRLQLqkktasgdgvsvskyrGLMGTVVTIAREEGLWALWNGVIAGLHRQCIYGGLRIGLYDPVKTFLVGSDFVGDIPLYQKIFAALLTGAIAIVVANPTDLVKVRLQaegklpsgvprryYGALDAYCTIVRQEGLGALWTGLGPNIARNAIVNAAElasydqvkevnslh
MSDLKLRPEISFAQTFLCSAFAACFAELCTIPLDTAKVRLQLQKKTASGDGVSVSKYRGLMGTVVTIAREEGLWALWNGVIAGLHRQCIYGGLRIGLYDPVKTFLVGSDFVGDIPLYQKIFAALLTGAIAIVVANPTDLVKVRLQAEGKLPSGVPRRYYGALDAYCTIVRQEGLGALWTGLGPNIARNAIVNAAELASYDQVKEVNSLH
********EISFAQTFLCSAFAACFAELCTIPLDTAKVRLQLQKKTASGDGVSVSKYRGLMGTVVTIAREEGLWALWNGVIAGLHRQCIYGGLRIGLYDPVKTFLVGSDFVGDIPLYQKIFAALLTGAIAIVVANPTDLVKVRLQAEGKLPSGVPRRYYGALDAYCTIVRQEGLGALWTGLGPNIARNAIVNAAELASY**********
************AQTFLCSAFAACFAELCTIPLDTAKVRLQL****************GLMGTVVTIAREEGLWALWNGVIAGLHRQCIYGGLRIGLYDPVKTFLV****VGDIPLYQKIFAALLTGAIAIVVANPTDLVKVRLQAEG****G*PRRYYGALDAYCTIVRQEGLGALWTGLGPNIARNAIVNAAELASYDQVKEVNSLH
MSDLKLRPEISFAQTFLCSAFAACFAELCTIPLDTAKVRLQLQ********VSVSKYRGLMGTVVTIAREEGLWALWNGVIAGLHRQCIYGGLRIGLYDPVKTFLVGSDFVGDIPLYQKIFAALLTGAIAIVVANPTDLVKVRLQAEGKLPSGVPRRYYGALDAYCTIVRQEGLGALWTGLGPNIARNAIVNAAELASYDQVKEVNSLH
********EISFAQTFLCSAFAACFAELCTIPLDTAKVRLQLQKKTAS***VSVSKYRGLMGTVVTIAREEGLWALWNGVIAGLHRQCIYGGLRIGLYDPVKTFLVGSDFVGDIPLYQKIFAALLTGAIAIVVANPTDLVKVRLQAEGKLPSGVPRRYYGALDAYCTIVRQEGLGALWTGLGPNIARNAIVNAAELASYDQVKEVNSLH
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooo
ooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooo
oooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MSDLKLRPEISFAQTFLCSAFAACFAELCTIPLDTAKVRLQLQKKTASGDGVSVSKYRGLMGTVVTIAREEGLWALWNGVIAGLHRQCIYGGLRIGLYDPVKTFLVGSDFVGDIPLYQKIFAALLTGAIAIVVANPTDLVKVRLQAEGKLPSGVPRRYYGALDAYCTIVRQEGLGALWTGLGPNIARNAIVNAAELASYDQVKEVNSLH
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query209 2.2.26 [Sep-21-2011]
Q9ZWG1305 Mitochondrial uncoupling no no 0.918 0.629 0.813 5e-95
O81845306 Mitochondrial uncoupling no no 0.942 0.643 0.732 3e-82
Q9N2I9 311 Mitochondrial uncoupling yes no 0.904 0.607 0.494 5e-46
O97562 309 Mitochondrial uncoupling yes no 0.885 0.598 0.494 1e-45
O77792 311 Mitochondrial uncoupling yes no 0.928 0.623 0.475 1e-45
P56499 308 Mitochondrial uncoupling yes no 0.875 0.594 0.502 1e-45
P56501 308 Mitochondrial uncoupling yes no 0.875 0.594 0.497 4e-45
Q3SZI5 309 Mitochondrial uncoupling no no 0.885 0.598 0.479 1e-44
Q9W720 310 Mitochondrial uncoupling no no 0.880 0.593 0.484 1e-44
P70406 309 Mitochondrial uncoupling no no 0.885 0.598 0.489 2e-44
>sp|Q9ZWG1|PUMP2_ARATH Mitochondrial uncoupling protein 2 OS=Arabidopsis thaliana GN=PUMP2 PE=2 SV=1 Back     alignment and function desciption
 Score =  346 bits (888), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 166/204 (81%), Positives = 185/204 (90%)

Query: 1   MSDLKLRPEISFAQTFLCSAFAACFAELCTIPLDTAKVRLQLQKKTASGDGVSVSKYRGL 60
           M+D K R EISF +TF+CSAFAACFAELCTIPLDTAKVRLQLQ+K  +GDG ++ KYRG 
Sbjct: 1   MADFKPRIEISFLETFICSAFAACFAELCTIPLDTAKVRLQLQRKIPTGDGENLPKYRGS 60

Query: 61  MGTVVTIAREEGLWALWNGVIAGLHRQCIYGGLRIGLYDPVKTFLVGSDFVGDIPLYQKI 120
           +GT+ TIAREEG+  LW GVIAGLHRQCIYGGLRIGLY+PVKT LVGSDF+GDIPLYQKI
Sbjct: 61  IGTLATIAREEGISGLWKGVIAGLHRQCIYGGLRIGLYEPVKTLLVGSDFIGDIPLYQKI 120

Query: 121 FAALLTGAIAIVVANPTDLVKVRLQAEGKLPSGVPRRYYGALDAYCTIVRQEGLGALWTG 180
            AALLTGAIAI+VANPTDLVKVRLQ+EGKLP+GVPRRY GA+DAY TIV+ EG+ ALWTG
Sbjct: 121 LAALLTGAIAIIVANPTDLVKVRLQSEGKLPAGVPRRYAGAVDAYFTIVKLEGVSALWTG 180

Query: 181 LGPNIARNAIVNAAELASYDQVKE 204
           LGPNIARNAIVNAAELASYDQ+KE
Sbjct: 181 LGPNIARNAIVNAAELASYDQIKE 204




PUMPS are mitochondrial transporter proteins that create proton leaks across the inner mitochondrial membrane, thus uncoupling oxidative phosphorylation. This leads to a decrease in the efficiency of oxidative phosphorylation and an increase in heat production. May be involved in protecting plant cells against oxidative stress damage.
Arabidopsis thaliana (taxid: 3702)
>sp|O81845|PUMP1_ARATH Mitochondrial uncoupling protein 1 OS=Arabidopsis thaliana GN=PUMP1 PE=1 SV=1 Back     alignment and function description
>sp|Q9N2I9|UCP3_CANFA Mitochondrial uncoupling protein 3 OS=Canis familiaris GN=UCP3 PE=2 SV=1 Back     alignment and function description
>sp|O97562|UCP2_PIG Mitochondrial uncoupling protein 2 OS=Sus scrofa GN=UCP2 PE=2 SV=1 Back     alignment and function description
>sp|O77792|UCP3_BOVIN Mitochondrial uncoupling protein 3 OS=Bos taurus GN=UCP3 PE=2 SV=1 Back     alignment and function description
>sp|P56499|UCP3_RAT Mitochondrial uncoupling protein 3 OS=Rattus norvegicus GN=Ucp3 PE=2 SV=1 Back     alignment and function description
>sp|P56501|UCP3_MOUSE Mitochondrial uncoupling protein 3 OS=Mus musculus GN=Ucp3 PE=2 SV=1 Back     alignment and function description
>sp|Q3SZI5|UCP2_BOVIN Mitochondrial uncoupling protein 2 OS=Bos taurus GN=UCP2 PE=2 SV=1 Back     alignment and function description
>sp|Q9W720|UCP2_DANRE Mitochondrial uncoupling protein 2 OS=Danio rerio GN=ucp2 PE=2 SV=1 Back     alignment and function description
>sp|P70406|UCP2_MOUSE Mitochondrial uncoupling protein 2 OS=Mus musculus GN=Ucp2 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query209
224059342305 predicted protein [Populus trichocarpa] 0.918 0.629 0.828 4e-94
297796843305 ATUCP2 [Arabidopsis lyrata subsp. lyrata 0.918 0.629 0.818 5e-94
42573732272 uncoupling protein 2 [Arabidopsis thalia 0.956 0.735 0.813 2e-93
18424178305 uncoupling protein 2 [Arabidopsis thalia 0.918 0.629 0.813 3e-93
255558838305 mitochondrial uncoupling protein, putati 0.909 0.622 0.818 4e-93
359478882302 PREDICTED: mitochondrial uncoupling prot 0.971 0.672 0.794 6e-90
225434708303 PREDICTED: mitochondrial uncoupling prot 0.971 0.669 0.794 6e-90
449450782300 PREDICTED: mitochondrial uncoupling prot 0.913 0.636 0.790 8e-90
356496148305 PREDICTED: mitochondrial uncoupling prot 0.976 0.668 0.754 2e-87
224087657305 predicted protein [Populus trichocarpa] 0.909 0.622 0.75 1e-86
>gi|224059342|ref|XP_002299831.1| predicted protein [Populus trichocarpa] gi|222847089|gb|EEE84636.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  349 bits (895), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 169/204 (82%), Positives = 186/204 (91%)

Query: 1   MSDLKLRPEISFAQTFLCSAFAACFAELCTIPLDTAKVRLQLQKKTASGDGVSVSKYRGL 60
           M+DLK   +ISF + FLCSAFAACFAE CTIPLDTAKVRLQLQ+KT + +GVS+ KYRGL
Sbjct: 1   MADLKPSSDISFVEIFLCSAFAACFAEFCTIPLDTAKVRLQLQRKTFASEGVSLPKYRGL 60

Query: 61  MGTVVTIAREEGLWALWNGVIAGLHRQCIYGGLRIGLYDPVKTFLVGSDFVGDIPLYQKI 120
           +GTV TIAREEGL ALW G+ AGLHRQ IYGGLRIGLY+PVK+FLVGSDFVGDIPLYQKI
Sbjct: 61  LGTVATIAREEGLAALWKGITAGLHRQFIYGGLRIGLYEPVKSFLVGSDFVGDIPLYQKI 120

Query: 121 FAALLTGAIAIVVANPTDLVKVRLQAEGKLPSGVPRRYYGALDAYCTIVRQEGLGALWTG 180
            AALLTGA+AIV+ANPTDLVKVRLQAEGKLP+GVP RY GALDAY TIVRQEGLGALWTG
Sbjct: 121 LAALLTGAMAIVIANPTDLVKVRLQAEGKLPAGVPGRYAGALDAYFTIVRQEGLGALWTG 180

Query: 181 LGPNIARNAIVNAAELASYDQVKE 204
           LGPNIARNAI+NAAELASYD+VK+
Sbjct: 181 LGPNIARNAIINAAELASYDEVKQ 204




Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297796843|ref|XP_002866306.1| ATUCP2 [Arabidopsis lyrata subsp. lyrata] gi|297312141|gb|EFH42565.1| ATUCP2 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|42573732|ref|NP_974962.1| uncoupling protein 2 [Arabidopsis thaliana] gi|332009742|gb|AED97125.1| uncoupling protein 2 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|18424178|ref|NP_568894.1| uncoupling protein 2 [Arabidopsis thaliana] gi|75315972|sp|Q9ZWG1.1|PUMP2_ARATH RecName: Full=Mitochondrial uncoupling protein 2; Short=AtPUMP2 gi|4063007|dbj|BAA36222.1| uncoupling protein [Arabidopsis thaliana] gi|9759228|dbj|BAB09640.1| uncoupling protein [Arabidopsis thaliana] gi|21593775|gb|AAM65742.1| uncoupling protein AtUCP2 [Arabidopsis thaliana] gi|332009741|gb|AED97124.1| uncoupling protein 2 [Arabidopsis thaliana] gi|385137896|gb|AFI41209.1| uncoupling protein 2, partial [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|255558838|ref|XP_002520442.1| mitochondrial uncoupling protein, putative [Ricinus communis] gi|223540284|gb|EEF41855.1| mitochondrial uncoupling protein, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|359478882|ref|XP_003632181.1| PREDICTED: mitochondrial uncoupling protein 2-like isoform 2 [Vitis vinifera] gi|297745960|emb|CBI16016.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|225434708|ref|XP_002281053.1| PREDICTED: mitochondrial uncoupling protein 2-like isoform 1 [Vitis vinifera] Back     alignment and taxonomy information
>gi|449450782|ref|XP_004143141.1| PREDICTED: mitochondrial uncoupling protein 2-like [Cucumis sativus] gi|449496627|ref|XP_004160183.1| PREDICTED: mitochondrial uncoupling protein 2-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356496148|ref|XP_003516932.1| PREDICTED: mitochondrial uncoupling protein 3-like [Glycine max] Back     alignment and taxonomy information
>gi|224087657|ref|XP_002308202.1| predicted protein [Populus trichocarpa] gi|118483177|gb|ABK93493.1| unknown [Populus trichocarpa] gi|222854178|gb|EEE91725.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query209
TAIR|locus:2154593305 UCP2 "uncoupling protein 2" [A 0.976 0.668 0.813 7.7e-87
TAIR|locus:2080300306 PUMP1 "plant uncoupling mitoch 0.942 0.643 0.732 1e-75
ZFIN|ZDB-GENE-040426-1317 309 ucp3 "uncoupling protein 3" [D 0.904 0.611 0.489 1e-43
UNIPROTKB|O97562 309 UCP2 "Mitochondrial uncoupling 0.880 0.595 0.497 1e-43
RGD|3933 308 Ucp3 "uncoupling protein 3 (mi 0.875 0.594 0.502 3.5e-43
UNIPROTKB|F1PWF8 309 UCP2 "Mitochondrial uncoupling 0.880 0.595 0.492 4.5e-43
MGI|MGI:1099787 308 Ucp3 "uncoupling protein 3 (mi 0.875 0.594 0.497 7.3e-43
MGI|MGI:109354 309 Ucp2 "uncoupling protein 2 (mi 0.880 0.595 0.492 7.3e-43
UNIPROTKB|Q3SZI5 309 UCP2 "Mitochondrial uncoupling 0.880 0.595 0.481 1.2e-42
UNIPROTKB|Q9N2I9 311 UCP3 "Mitochondrial uncoupling 0.904 0.607 0.494 1.2e-42
TAIR|locus:2154593 UCP2 "uncoupling protein 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 868 (310.6 bits), Expect = 7.7e-87, P = 7.7e-87
 Identities = 166/204 (81%), Positives = 185/204 (90%)

Query:     1 MSDLKLRPEISFAQTFLCSAFAACFAELCTIPLDTAKVRLQLQKKTASGDGVSVSKYRGL 60
             M+D K R EISF +TF+CSAFAACFAELCTIPLDTAKVRLQLQ+K  +GDG ++ KYRG 
Sbjct:     1 MADFKPRIEISFLETFICSAFAACFAELCTIPLDTAKVRLQLQRKIPTGDGENLPKYRGS 60

Query:    61 MGTVVTIAREEGLWALWNGVIAGLHRQCIYGGLRIGLYDPVKTFLVGSDFVGDIPLYQKI 120
             +GT+ TIAREEG+  LW GVIAGLHRQCIYGGLRIGLY+PVKT LVGSDF+GDIPLYQKI
Sbjct:    61 IGTLATIAREEGISGLWKGVIAGLHRQCIYGGLRIGLYEPVKTLLVGSDFIGDIPLYQKI 120

Query:   121 FAALLTGAIAIVVANPTDLVKVRLQAEGKLPSGVPRRYYGALDAYCTIVRQEGLGALWTG 180
              AALLTGAIAI+VANPTDLVKVRLQ+EGKLP+GVPRRY GA+DAY TIV+ EG+ ALWTG
Sbjct:   121 LAALLTGAIAIIVANPTDLVKVRLQSEGKLPAGVPRRYAGAVDAYFTIVKLEGVSALWTG 180

Query:   181 LGPNIARNAIVNAAELASYDQVKE 204
             LGPNIARNAIVNAAELASYDQ+KE
Sbjct:   181 LGPNIARNAIVNAAELASYDQIKE 204


GO:0005739 "mitochondrion" evidence=ISM
GO:0006839 "mitochondrial transport" evidence=IEA
GO:0017077 "oxidative phosphorylation uncoupler activity" evidence=ISS
GO:0031966 "mitochondrial membrane" evidence=IEA
GO:0005794 "Golgi apparatus" evidence=IDA
GO:0006007 "glucose catabolic process" evidence=RCA
GO:0009853 "photorespiration" evidence=RCA
GO:0005886 "plasma membrane" evidence=IDA
TAIR|locus:2080300 PUMP1 "plant uncoupling mitochondrial protein 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040426-1317 ucp3 "uncoupling protein 3" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|O97562 UCP2 "Mitochondrial uncoupling protein 2" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
RGD|3933 Ucp3 "uncoupling protein 3 (mitochondrial, proton carrier)" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1PWF8 UCP2 "Mitochondrial uncoupling protein 2" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
MGI|MGI:1099787 Ucp3 "uncoupling protein 3 (mitochondrial, proton carrier)" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
MGI|MGI:109354 Ucp2 "uncoupling protein 2 (mitochondrial, proton carrier)" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|Q3SZI5 UCP2 "Mitochondrial uncoupling protein 2" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|Q9N2I9 UCP3 "Mitochondrial uncoupling protein 3" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query209
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 4e-24
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 2e-20
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 2e-11
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 1e-09
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
 Score = 91.2 bits (227), Expect = 4e-24
 Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 3/94 (3%)

Query: 112 GDIPLYQKIFAALLTGAIAIVVANPTDLVKVRLQAEGKLPSGVPRRYYGALDAYCTIVRQ 171
             +     + A  + GAIA  V  P D+VK RLQ      +G  R+Y G LD +  I ++
Sbjct: 1   SPLSFLASLLAGGIAGAIAATVTYPLDVVKTRLQ---SSAAGGSRKYKGILDCFKKIYKE 57

Query: 172 EGLGALWTGLGPNIARNAIVNAAELASYDQVKEV 205
           EG+  L+ GL PN+ R A   A    +Y+ +K++
Sbjct: 58  EGIRGLYKGLLPNLLRVAPAAAIYFGTYETLKKL 91


Length = 96

>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 209
KOG0752320 consensus Mitochondrial solute carrier protein [En 100.0
KOG0764 299 consensus Mitochondrial FAD carrier protein [Energ 100.0
KOG0753317 consensus Mitochondrial fatty acid anion carrier p 100.0
KOG0764299 consensus Mitochondrial FAD carrier protein [Energ 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0752 320 consensus Mitochondrial solute carrier protein [En 100.0
KOG0753317 consensus Mitochondrial fatty acid anion carrier p 100.0
KOG0762311 consensus Mitochondrial carrier protein [Energy pr 100.0
KOG0759286 consensus Mitochondrial oxoglutarate/malate carrie 100.0
KOG0760302 consensus Mitochondrial carrier protein MRS3/4 [En 100.0
KOG0758297 consensus Mitochondrial carnitine-acylcarnitine ca 100.0
KOG0768323 consensus Mitochondrial carrier protein PET8 [Ener 100.0
KOG0757 319 consensus Mitochondrial carrier protein - Rim2p/Mr 100.0
KOG0757319 consensus Mitochondrial carrier protein - Rim2p/Mr 100.0
PTZ00168259 mitochondrial carrier protein; Provisional 100.0
KOG0758297 consensus Mitochondrial carnitine-acylcarnitine ca 100.0
KOG0760 302 consensus Mitochondrial carrier protein MRS3/4 [En 100.0
KOG0761 361 consensus Mitochondrial carrier protein CGI-69 [En 100.0
KOG0762 311 consensus Mitochondrial carrier protein [Energy pr 100.0
KOG0754294 consensus Mitochondrial oxodicarboxylate carrier p 100.0
KOG0759286 consensus Mitochondrial oxoglutarate/malate carrie 100.0
KOG0751694 consensus Mitochondrial aspartate/glutamate carrie 100.0
PTZ00168259 mitochondrial carrier protein; Provisional 100.0
KOG0754294 consensus Mitochondrial oxodicarboxylate carrier p 100.0
KOG0761361 consensus Mitochondrial carrier protein CGI-69 [En 100.0
KOG0770 353 consensus Predicted mitochondrial carrier protein 100.0
KOG0766297 consensus Predicted mitochondrial carrier protein 100.0
KOG0756299 consensus Mitochondrial tricarboxylate/dicarboxyla 100.0
KOG0749298 consensus Mitochondrial ADP/ATP carrier proteins [ 99.98
KOG0763301 consensus Mitochondrial ornithine transporter [Ene 99.97
KOG0765333 consensus Predicted mitochondrial carrier protein 99.97
KOG0750304 consensus Mitochondrial solute carrier protein [En 99.97
KOG0769 308 consensus Predicted mitochondrial carrier protein 99.97
KOG0755320 consensus Mitochondrial oxaloacetate carrier prote 99.97
KOG0036463 consensus Predicted mitochondrial carrier protein 99.96
KOG0770353 consensus Predicted mitochondrial carrier protein 99.96
KOG0767 333 consensus Mitochondrial phosphate carrier protein 99.96
KOG0036463 consensus Predicted mitochondrial carrier protein 99.96
KOG0765 333 consensus Predicted mitochondrial carrier protein 99.96
KOG0755320 consensus Mitochondrial oxaloacetate carrier prote 99.95
KOG0749298 consensus Mitochondrial ADP/ATP carrier proteins [ 99.95
KOG0768 323 consensus Mitochondrial carrier protein PET8 [Ener 99.95
KOG0769308 consensus Predicted mitochondrial carrier protein 99.95
KOG0763301 consensus Mitochondrial ornithine transporter [Ene 99.94
KOG0756299 consensus Mitochondrial tricarboxylate/dicarboxyla 99.93
KOG0767333 consensus Mitochondrial phosphate carrier protein 99.92
KOG0750 304 consensus Mitochondrial solute carrier protein [En 99.92
KOG0766 297 consensus Predicted mitochondrial carrier protein 99.86
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.85
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.8
KOG2745321 consensus Mitochondrial carrier protein [General f 99.76
KOG1519297 consensus Predicted mitochondrial carrier protein 99.68
KOG0751 694 consensus Mitochondrial aspartate/glutamate carrie 99.58
KOG2954427 consensus Mitochondrial carrier protein [General f 99.56
KOG2745321 consensus Mitochondrial carrier protein [General f 99.53
KOG1519297 consensus Predicted mitochondrial carrier protein 99.38
KOG2954427 consensus Mitochondrial carrier protein [General f 98.82
>KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
Probab=100.00  E-value=1.2e-44  Score=280.03  Aligned_cols=191  Identities=31%  Similarity=0.478  Sum_probs=175.4

Q ss_pred             ccchHHHHHHHHHHHHhHHHhhchhHHHHHHHhccccccCCCCCcccCCCCHHHHHHHHHHhhhHHHHhhhhHHHHHHHh
Q 028451            9 EISFAQTFLCSAFAACFAELCTIPLDTAKVRLQLQKKTASGDGVSVSKYRGLMGTVVTIAREEGLWALWNGVIAGLHRQC   88 (209)
Q Consensus         9 ~~~~~~~~~~g~~a~~~~~~i~~Pld~ik~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~~~~~~   88 (209)
                      ..++..++++|++||+++++++||||++|+|+-.+.+..        .|++.++++++|+++||++|||||+.|++++.+
T Consensus       123 ~~~~~~~l~aGalAG~~a~~~tyPLDlvRtRLa~q~~~~--------~y~~l~~a~~~I~~~eGi~gfYrGl~ptllgi~  194 (320)
T KOG0752|consen  123 SLSPLVRLVAGALAGMTATLATYPLDLLRTRLAVQGELK--------VYRGLLHAFKTIYREEGIRGFYRGLGPTLLGIA  194 (320)
T ss_pred             ccchhHHHHHHHHHHHHHHHhcCcHHHhhhheeeecccc--------cCCcHHHHHHHHHHhcchhhhhcCcchhhheeh
Confidence            678899999999999999999999999999999986532        799999999999999999999999999999999


Q ss_pred             hccceeeeehHHhhh-hhccCCCCCCchhHHHHHHHHHHhHhhhhccCcHHHHHHHHhhcCCCCCCCCCCCCCHHHHHHH
Q 028451           89 IYGGLRIGLYDPVKT-FLVGSDFVGDIPLYQKIFAALLTGAIAIVVANPTDLVKVRLQAEGKLPSGVPRRYYGALDAYCT  167 (209)
Q Consensus        89 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~a~~~~~~i~~P~d~ik~~~q~~~~~~~~~~~~~~~~~~~~~~  167 (209)
                      |+.++.|.+||.+++ .+.....+++.+.+..+++|++||+++..++||+|+||+|||+.+..+.+....|.++++|+++
T Consensus       195 Pyag~~F~~Yd~lk~~~~~~~~~~~~~~~~~~l~~GalAG~~aqti~yPlD~vRrrmQ~~~~~~~~~~~~~~~~~~~~~~  274 (320)
T KOG0752|consen  195 PYAGINFFAYDTLKKWQYLKSSGNKELSNFERLLCGALAGAVAQTITYPLDTVRRRMQLGGLKYFGGGFRYKGVLDAFRQ  274 (320)
T ss_pred             hhhhhHHHHHHHHHHhhcccccccchhhhHHHHHHHHHHHHHHhhhcccHHHHHHHHhccCccccccccccccHHHHHHH
Confidence            999999999999999 5544444456677899999999999999999999999999999987655555677999999999


Q ss_pred             HHhhhchhhhhcCchHHHHHHHHHhchHHHhHHHHHHHhh
Q 028451          168 IVRQEGLGALWTGLGPNIARNAIVNAAELASYDQVKEVNS  207 (209)
Q Consensus       168 i~~~~G~~~ly~G~~~~~~~~~~~~~~~~~~y~~~~~~~~  207 (209)
                      |+++||+.|||||+.|++++.+|..++.|++||.+|+.+.
T Consensus       275 i~~~EG~~gLYkGl~p~~lK~~P~~ai~F~~Ye~~k~~l~  314 (320)
T KOG0752|consen  275 IVKTEGVKGLYKGLSPNLLKVVPSVAISFTTYEILKDLLR  314 (320)
T ss_pred             HHHHhhhhhhhccccHHHHHhcccceeeeehHHHHHHHhh
Confidence            9999999999999999999999999999999999998765



>KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion] Back     alignment and domain information
>KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion] Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion] Back     alignment and domain information
>KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0759 consensus Mitochondrial oxoglutarate/malate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0760 consensus Mitochondrial carrier protein MRS3/4 [Energy production and conversion] Back     alignment and domain information
>KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion] Back     alignment and domain information
>KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion] Back     alignment and domain information
>KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion] Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0760 consensus Mitochondrial carrier protein MRS3/4 [Energy production and conversion] Back     alignment and domain information
>KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion] Back     alignment and domain information
>KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0759 consensus Mitochondrial oxoglutarate/malate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion] Back     alignment and domain information
>KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0766 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0756 consensus Mitochondrial tricarboxylate/dicarboxylate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0749 consensus Mitochondrial ADP/ATP carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0763 consensus Mitochondrial ornithine transporter [Energy production and conversion] Back     alignment and domain information
>KOG0765 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0755 consensus Mitochondrial oxaloacetate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0767 consensus Mitochondrial phosphate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG0765 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0755 consensus Mitochondrial oxaloacetate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0749 consensus Mitochondrial ADP/ATP carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion] Back     alignment and domain information
>KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0763 consensus Mitochondrial ornithine transporter [Energy production and conversion] Back     alignment and domain information
>KOG0756 consensus Mitochondrial tricarboxylate/dicarboxylate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0767 consensus Mitochondrial phosphate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0766 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>KOG2745 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] Back     alignment and domain information
>KOG2954 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2745 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2954 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query209
2lck_A 303 Structure Of The Mitochondrial Uncoupling Protein 2 2e-45
2lck_A 303 Structure Of The Mitochondrial Uncoupling Protein 2 7e-05
1okc_A297 Structure Of Mitochondrial AdpATP CARRIER IN COMPLE 5e-12
>pdb|2LCK|A Chain A, Structure Of The Mitochondrial Uncoupling Protein 2 Determined By Nmr Molecular Fragment Replacement Length = 303 Back     alignment and structure

Iteration: 1

Score = 178 bits (452), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 94/192 (48%), Positives = 129/192 (67%), Gaps = 7/192 (3%) Query: 16 FLCSAFAACFAELCTIPLDTAKVRLQLQKKTASGDGVSVS-KYRGLMGTVVTIAREEGLW 74 FL + AAC A+L T PLDTAKVRLQ+Q ++ + S +YRG++GT++T+ R EG Sbjct: 5 FLGAGTAACIADLITFPLDTAKVRLQIQGESQGLVRTAASAQYRGVLGTILTMVRTEGPR 64 Query: 75 ALWNGVIAGLHRQCIYGGLRIGLYDPVKTFLV-GSDFVGDIPLYQKIFAALLTGAIAIVV 133 +L+NG++AGL RQ + +RIGLYD VK F GS+ G + ++ A TGA+A+ V Sbjct: 65 SLYNGLVAGLQRQMSFASVRIGLYDSVKQFYTKGSEHAG---IGSRLLAGSTTGALAVAV 121 Query: 134 ANPTDLVKVRLQAEGKLPSGVPRRYYGALDAYCTIVRQEGLGALWTGLGPNIARNAIVNA 193 A PTD+VKVR QA+ + G RRY ++AY TI R+EG+ LW G PN+ARNAIVN Sbjct: 122 AQPTDVVKVRFQAQARAGGG--RRYQSTVEAYKTIAREEGIRGLWKGTSPNVARNAIVNC 179 Query: 194 AELASYDQVKEV 205 AEL +YD +K+ Sbjct: 180 AELVTYDLIKDT 191
>pdb|2LCK|A Chain A, Structure Of The Mitochondrial Uncoupling Protein 2 Determined By Nmr Molecular Fragment Replacement Length = 303 Back     alignment and structure
>pdb|1OKC|A Chain A, Structure Of Mitochondrial AdpATP CARRIER IN COMPLEX WITH Carboxyatractyloside Length = 297 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query209
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 6e-81
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 3e-36
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 1e-18
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 8e-36
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 9e-35
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
 Score =  242 bits (620), Expect = 6e-81
 Identities = 89/190 (46%), Positives = 124/190 (65%), Gaps = 5/190 (2%)

Query: 16  FLCSAFAACFAELCTIPLDTAKVRLQLQKKTASGD-GVSVSKYRGLMGTVVTIAREEGLW 74
           FL +  AAC A+L T PLDTAKVRLQ+Q ++       + ++YRG++GT++T+ R EG  
Sbjct: 5   FLGAGTAACIADLITFPLDTAKVRLQIQGESQGLVRTAASAQYRGVLGTILTMVRTEGPR 64

Query: 75  ALWNGVIAGLHRQCIYGGLRIGLYDPVKTFLVGSDFVGDIPLYQKIFAALLTGAIAIVVA 134
           +L+NG++AGL RQ  +  +RIGLYD VK F           +  ++ A   TGA+A+ VA
Sbjct: 65  SLYNGLVAGLQRQMSFASVRIGLYDSVKQFYTKGS--EHAGIGSRLLAGSTTGALAVAVA 122

Query: 135 NPTDLVKVRLQAEGKLPSGVPRRYYGALDAYCTIVRQEGLGALWTGLGPNIARNAIVNAA 194
            PTD+VKVR QA+ +      RRY   ++AY TI R+EG+  LW G  PN+ARNAIVN A
Sbjct: 123 QPTDVVKVRFQAQARAGG--GRRYQSTVEAYKTIAREEGIRGLWKGTSPNVARNAIVNCA 180

Query: 195 ELASYDQVKE 204
           EL +YD +K+
Sbjct: 181 ELVTYDLIKD 190


>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query209
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 100.0
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 100.0
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
Probab=100.00  E-value=6.4e-41  Score=264.82  Aligned_cols=187  Identities=27%  Similarity=0.393  Sum_probs=168.6

Q ss_pred             ccchHHHHHHHHHHHHhHHHhhchhHHHHHHHhccccccCCCCCcccCCCCHHHHHHHHHHhhhHHHHhhhhHHHHHHHh
Q 028451            9 EISFAQTFLCSAFAACFAELCTIPLDTAKVRLQLQKKTASGDGVSVSKYRGLMGTVVTIAREEGLWALWNGVIAGLHRQC   88 (209)
Q Consensus         9 ~~~~~~~~~~g~~a~~~~~~i~~Pld~ik~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~~~~~~   88 (209)
                      ..+....+++|++|++++.++++|+|++|+|+|++....     ....|++.++++++|+++||++|||||+.+++++++
T Consensus       101 ~~~~~~~~~ag~~ag~~~~~~~~Pld~vktrlq~~~~~~-----~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~  175 (303)
T 2lck_A          101 HAGIGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQARAG-----GGRRYQSTVEAYKTIAREEGIRGLWKGTSPNVARNA  175 (303)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHSCSCC-----CSSSCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred             CCcHHHHHHHHHHHHHHHHHHcCcHHHHHHHHhcccccC-----CCCCCCCHHHHHHHHHHhcChhhhhCCccHHHHHHH
Confidence            367788999999999999999999999999999986421     234789999999999999999999999999999999


Q ss_pred             hccceeeeehHHhhhhhccCCCCCCchhHHHHHHHHHHhHhhhhccCcHHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHH
Q 028451           89 IYGGLRIGLYDPVKTFLVGSDFVGDIPLYQKIFAALLTGAIAIVVANPTDLVKVRLQAEGKLPSGVPRRYYGALDAYCTI  168 (209)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~i~~P~d~ik~~~q~~~~~~~~~~~~~~~~~~~~~~i  168 (209)
                      +..+++|.+||.+++.+.+... ...+....+++|++||++++++++|+|+||+|+|.+..      ..|.++++|++++
T Consensus       176 ~~~~i~f~~ye~~k~~l~~~~~-~~~~~~~~~~~g~~ag~~~~~~~~P~dvvktrlq~~~~------~~y~~~~~~~~~i  248 (303)
T 2lck_A          176 IVNCAELVTYDLIKDTLLKANL-MTDDLPCHFTSAFGAGFCTTVIASPVDVVKTRYMNSAL------GQYHSAGHCALTM  248 (303)
T ss_dssp             HHHHHHHHHHHHHHHTTTTTTS-CCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCS------SSCCSHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhccC-CCCchHHHHHHHHHHHHHHHHHcCHHHHHHHHHHhccc------cccCCHHHHHHHH
Confidence            9999999999999998865332 23456778999999999999999999999999999863      2699999999999


Q ss_pred             HhhhchhhhhcCchHHHHHHHHHhchHHHhHHHHHHHhh
Q 028451          169 VRQEGLGALWTGLGPNIARNAIVNAAELASYDQVKEVNS  207 (209)
Q Consensus       169 ~~~~G~~~ly~G~~~~~~~~~~~~~~~~~~y~~~~~~~~  207 (209)
                      +++||++|||||+.++++|.+|.++++|.+||.+++.+.
T Consensus       249 ~~~eG~~glyrG~~~~~~r~~p~~~i~f~~ye~~k~~l~  287 (303)
T 2lck_A          249 LRKEGPRAFYKGFMPSFLRLGSWNVVMFVTYEQLKRALM  287 (303)
T ss_dssp             HHSSCTHHHHSCCHHHHHHHHHHHHHHHHHHHHHHSCCC
T ss_pred             HHHcChHHhhccHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999998764



>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 209
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 2e-22
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 2e-18
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
 Score = 89.8 bits (221), Expect = 2e-22
 Identities = 47/195 (24%), Positives = 80/195 (41%), Gaps = 6/195 (3%)

Query: 10  ISFAQTFLCSAFAACFAELCTIPLDTAKVRLQLQKKTASGDGVSVSKYRGLMGTVVTIAR 69
           +SF + FL    AA  ++    P++  K+ LQ+Q   AS    +  +Y+G++  VV I +
Sbjct: 4   LSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQ--HASKQISAEKQYKGIIDCVVRIPK 61

Query: 70  EEGLWALWNGVIAGLHRQCIYGGLRIGLYDPVKTFLVGSDFVGD---IPLYQKIFAALLT 126
           E+G  + W G +A + R      L     D  K   +G               + +    
Sbjct: 62  EQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAA 121

Query: 127 GAIAIVVANPTDLVKVRLQAEGKLPSGVPRRYYGALDAYCTIVRQEGLGALWTGLGPNIA 186
           GA ++    P D  + RL A+    +   R + G  +    I + +GL  L+ G   ++ 
Sbjct: 122 GATSLCFVYPLDFARTRLAADVGKGA-AQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQ 180

Query: 187 RNAIVNAAELASYDQ 201
              I  AA    YD 
Sbjct: 181 GIIIYRAAYFGVYDT 195


>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query209
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 100.0
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 100.0
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
Probab=100.00  E-value=1.2e-36  Score=237.16  Aligned_cols=185  Identities=24%  Similarity=0.353  Sum_probs=161.3

Q ss_pred             ccchHHHHHHHHHHHHhHHHhhchhHHHHHHHhccccccCCCCCcccCCCCHHHHHHHHHHhhhHHHHhhhhHHHHHHHh
Q 028451            9 EISFAQTFLCSAFAACFAELCTIPLDTAKVRLQLQKKTASGDGVSVSKYRGLMGTVVTIAREEGLWALWNGVIAGLHRQC   88 (209)
Q Consensus         9 ~~~~~~~~~~g~~a~~~~~~i~~Pld~ik~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~~~~~~   88 (209)
                      .......+++|.+|++++.++.+|+|++|+|+|.+....    ...+.+.+.++.+++++++||+++||+|+.+++++++
T Consensus       108 ~~~~~~~~~~~~~a~~~~~~~~~P~~~ik~r~~~~~~~~----~~~~~~~~~~~~~~~~~~~~G~~~l~~G~~~~~~~~~  183 (292)
T d1okca_         108 WRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKG----AAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGII  183 (292)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSS----TTTCSCSSHHHHHHHHHHHHCHHHHTTTHHHHHHHHH
T ss_pred             chhhhhhhhhhhhhhhhHHhhhhhhhhhheeeecccccc----ccccccccHHHHHHHhhhccchhhhhcccccccccee
Confidence            345677888999999999999999999999999986543    2345788999999999999999999999999999999


Q ss_pred             hccceeeeehHHhhhhhccCCCCCCchhHHHHHHHHHHhHhhhhccCcHHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHH
Q 028451           89 IYGGLRIGLYDPVKTFLVGSDFVGDIPLYQKIFAALLTGAIAIVVANPTDLVKVRLQAEGKLPSGVPRRYYGALDAYCTI  168 (209)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~i~~P~d~ik~~~q~~~~~~~~~~~~~~~~~~~~~~i  168 (209)
                      ++.+++|..||.+++.+.+.   ........++++++++++++++++|+|+||+|+|.+...+. ....|.++++|++++
T Consensus       184 ~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~~~a~~~t~P~dvvktR~q~~~~~~~-~~~~y~~~~~~~~~i  259 (292)
T d1okca_         184 IYRAAYFGVYDTAKGMLPDP---KNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQSGRKG-ADIMYTGTVDCWRKI  259 (292)
T ss_dssp             HHHHHHHHHHHHHHHSSCGG---GCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCG-GGCSCSSHHHHHHHH
T ss_pred             hHhhhhhhhccchhhhcccc---cccchHHHHHHHHHHHHHHhhccccHHHHHHHHHhcCCCCC-CCCCCCCHHHHHHHH
Confidence            99999999999999987543   23456778999999999999999999999999999875322 234799999999999


Q ss_pred             HhhhchhhhhcCchHHHHHHHHHhchHHHhHHHH
Q 028451          169 VRQEGLGALWTGLGPNIARNAIVNAAELASYDQV  202 (209)
Q Consensus       169 ~~~~G~~~ly~G~~~~~~~~~~~~~~~~~~y~~~  202 (209)
                      +++||+++||||+.+++++.++ +++.|.+||.+
T Consensus       260 ~~~eG~~~lyrG~~~~~~r~i~-~~i~~~~ye~l  292 (292)
T d1okca_         260 AKDEGPKAFFKGAWSNVLRGMG-GAFVLVLYDEI  292 (292)
T ss_dssp             HHHHCGGGGGTTHHHHHHHHHH-HHHHHHHHHTC
T ss_pred             HHhcCcCcccccHHHHHHHHHH-HHhhhhHhhcC
Confidence            9999999999999999999765 68999999963



>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure