Citrus Sinensis ID: 028617

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200------
Protein Sequence
MYAISWLPSFPINLARSRSRKLNKTQLHNRKRQINAMRAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDADADYVCRKVLNMRLFPNENTGKGWDLNVMQKKYGVLLVSQFTLYGILKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNPDAIKGKCAFQLHLVLRSFSFLYKSRLFILSRLFSMYKPWLGRSLYVLLSG
Secondary Structure (PSIPRED)
cccccccccccccHHHHHcccccHHHHHHccccccccEEEEEEEcEEEEEEccEEEEEEccEEEEEEEccccccHHHHHHHHHHHHccccccccccccccccccccccccEEEEEcccccccccccccccccccccccHHHHHHHHHHHHHHHccccEEEEEEcccEEEEEEEEEEEEEccccccccEEEEEccccccEEEEEEcc
Secondary Structure Prediction (SSPRO)
ccEEcccccccEEHHHHcccccccccHccHHHHHHHcEEEEEEEEEEEEEEccEEEEEEccEEEEEEEcEccccHHHHHHHHHHHHHcccEEccccccccEEcccccccEEEEEEcHHHEEEcccccccHHHcccHHHHHHHHHHHHHHHHcccccccEEEcccEEEEEEcccEEEEEEccccccccccccccccccccEEEEccc
Coil and Loop (DISEMBL)
myaiswlpsfpinlaRSRSRKLNKTQLHNRKRQINAMRAVVQRVASASVEVEGRLVSEIGPGLLVLVGlhefdtdadadYVCRKVlnmrlfpnentgkgwdlnVMQKKYGVLLVSQFTLYGilkgnkpdfhvamppqkakpfyDSLVDKFRksynpdaikgkcAFQLHLVLRSFSFLYKSRLFILSRLFSMYKPWLGRSLYVLLSG
Flexible Loop (DISEMBL)
myaiswlpsfpinlarsrsrklnktqlhnrkrqinamRAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDADADYVCRKVLNMRLfpnentgkgwdLNVMQKKYGVLLVSQFTLYGILKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNPDAIKGKCAFQLHLVLRSFSFLYKSRLFILSRLFSMYKPWLGRSLYVLLSG
Low Complexity Region (SEG)
MYAISWLPSFPINLARSRSRKLNKTQLHNRKRQINAMravvqrvasasveveGRLVSEIGPGLLVLVGLHEFDTDADADYVCRKVLNMRLFPNENTGKGWDLNVMQKKYGVLLVSQFTLYGILKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNPDAIKGKCAFQLHLVLRSFSFLYKSRLFILSRLFSMYKPWLGRSLYVLLSG
Disordered region (IsUnstruct)
***ISWLPSFPIN********************INAMRAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDADADYVCRKVLNMRLFPNENTGKGWDLNVMQKKYGVLLVSQFTLYGILKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNPDAIKGKCAFQLHLVLRSFSFLYKSRLFILSRLFSMYKPWLGRSLYVLL**
Disordered Region (DISOPRED)
****SW******************************MRAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDADADYVCRKVLNMRLFPNENTGKGWDLNVMQKKYGVLLVSQFTLYGILKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNPDAIKGKCAFQLHLVLRSFSFLYKSRLFILSRLFSMYKPWLGRSLYVLLSG
Disordered Region (DISEMBL)
MYAISWLPSFPINLARSRSRKLNKTQLHNRKRQINAMRAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDADADYVCRKVLNMRLFPNENTGKGWDLNVMQKKYGVLLVSQFTLYGILKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNPDAIKGKCAFQLHLVLRSFSFLYKSRLFILSRLFSMYKPWLGRSLYVLLSG
Disordered Region (DISPRO)
MYAISWLPSFPINLARSRSRKLNKTQLHNRKRQINAMRAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDADADYVCRKVLNMRLFPNENTGKGWDLNVMQKKYGVLLVSQFTLYGILKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNPDAIKGKCAFQLHLVLRSFSFLYKSRLFILSRLFSMYKPWLGRSLYVLLS*
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MYAISWLPSFPINLARSRSRKLNKTQLHNRKRQINAMRAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDADADYVCRKVLNMRLFPNENTGKGWDLNVMQKKYGVLLVSQFTLYGILKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNPDAIKGKCAFQLHLVLRSFSFLYKSRLFILSRLFSMYKPWLGRSLYVLLSG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	206	2.2.26 [Sep-21-2011]
Q54EY1	151	D-tyrosyl-tRNA(Tyr) deacy	yes	no	0.601	0.821	0.5	4e-32
Q8TEA8	209	D-tyrosyl-tRNA(Tyr) deacy	yes	no	0.640	0.631	0.5	1e-31
Q9DD18	209	D-tyrosyl-tRNA(Tyr) deacy	yes	no	0.640	0.631	0.5	1e-31
Q2T9V8	209	D-tyrosyl-tRNA(Tyr) deacy	yes	no	0.640	0.631	0.492	6e-31
C5CGW6	148	D-tyrosyl-tRNA(Tyr) deacy	yes	no	0.626	0.871	0.426	2e-22
Q01RT2	151	D-tyrosyl-tRNA(Tyr) deacy	yes	no	0.572	0.781	0.462	1e-20
B7K3F6	147	D-tyrosyl-tRNA(Tyr) deacy	yes	no	0.567	0.795	0.415	2e-20
Q1IHZ8	149	D-tyrosyl-tRNA(Tyr) deacy	yes	no	0.548	0.758	0.448	2e-20
Q74FT1	152	D-tyrosyl-tRNA(Tyr) deacy	yes	no	0.640	0.868	0.411	2e-20
A5D3E0	149	D-tyrosyl-tRNA(Tyr) deacy	yes	no	0.548	0.758	0.483	2e-20

>sp|Q54EY1|DTD_DICDI D-tyrosyl-tRNA(Tyr) deacylase OS=Dictyostelium discoideum GN=dtd PE=3 SV=1

 Score =  137 bits (346), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 62/124 (50%), Positives = 88/124 (70%)

Query: 37  MRAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDADADYVCRKVLNMRLFPNENT 96
           M+A++QRV S+SV VEG ++SEI  GL+ L+G+   DT  DA+Y+ RK+LN+RL+ NE+ 
Sbjct: 1   MKAIIQRVKSSSVTVEGEVISEIKQGLMCLIGIGRDDTKEDAEYITRKILNLRLWKNEDG 60

Query: 97  GKGWDLNVMQKKYGVLLVSQFTLYGILKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNP 156
            K WD +V Q  Y +L VSQFTL+  LKGNK  +H+AM P+ +K FY   ++  +KSY P
Sbjct: 61  TKNWDRSVQQMDYEILFVSQFTLFAQLKGNKQSYHLAMAPELSKQFYLDFLENAKKSYKP 120

Query: 157 DAIK 160
           + IK
Sbjct: 121 EKIK 124

Hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr). Could be a defense mechanism against a harmful effect of D-tyrosine.
Dictyostelium discoideum (taxid: 44689)
EC: 3EC: .EC: 1EC: .EC: -EC: .EC: -

>sp|Q8TEA8|DTD1_HUMAN D-tyrosyl-tRNA(Tyr) deacylase 1 OS=Homo sapiens GN=DTD1 PE=1 SV=2

 Score =  136 bits (342), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 68/136 (50%), Positives = 98/136 (72%), Gaps = 4/136 (2%)

Query: 37  MRAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDADADYVCRKVLNMRLFPNENT 96
           M+AVVQRV  ASV V G  +S IG G+ VL+G+   DT  + +++ RK+LN+R+F +E +
Sbjct: 1   MKAVVQRVTRASVTVGGEQISAIGRGICVLLGISLEDTQKELEHMVRKILNLRVFEDE-S 59

Query: 97  GKGWDLNVMQKKYGVLLVSQFTLYGILKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNP 156
           GK W  +VM K+Y +L VSQFTL  +LKGNKPDFH+AMP ++A+ FY+S +++ RK+Y P
Sbjct: 60  GKHWSKSVMDKQYEILCVSQFTLQCVLKGNKPDFHLAMPTEQAEGFYNSFLEQLRKTYRP 119

Query: 157 DAIK-GKCA--FQLHL 169
           + IK GK     Q+H+
Sbjct: 120 ELIKDGKFGAYMQVHI 135

Hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr). Could be a defense mechanism against a harmful effect of D-tyrosine.

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 1

EC: .

EC: -

EC: .

EC: -

>sp|Q9DD18|DTD1_MOUSE D-tyrosyl-tRNA(Tyr) deacylase 1 OS=Mus musculus GN=Dtd1 PE=1 SV=2

 Score =  136 bits (342), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 68/136 (50%), Positives = 98/136 (72%), Gaps = 4/136 (2%)

Query: 37  MRAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDADADYVCRKVLNMRLFPNENT 96
           M+AVVQRV  ASV V G  +S IG G+ VL+G+   D+  + +++ RK+LN+R+F +E +
Sbjct: 1   MKAVVQRVTRASVTVGGEQISAIGRGICVLLGISMEDSQKELEHMVRKILNLRVFEDE-S 59

Query: 97  GKGWDLNVMQKKYGVLLVSQFTLYGILKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNP 156
           GK W  +VM K+Y VL VSQFTL  +LKGNKPDFH+AMP ++A+ FY+S +++ RKSY P
Sbjct: 60  GKHWSKSVMDKEYEVLCVSQFTLQCVLKGNKPDFHLAMPTEQAESFYNSFLEQLRKSYRP 119

Query: 157 DAIK-GKCA--FQLHL 169
           + I+ GK     Q+H+
Sbjct: 120 ELIRDGKFGAYMQVHI 135

Hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr). Could be a defense mechanism against a harmful effect of D-tyrosine.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 1

EC: .

EC: -

EC: .

EC: -

>sp|Q2T9V8|DTD1_BOVIN D-tyrosyl-tRNA(Tyr) deacylase 1 OS=Bos taurus GN=DTD1 PE=2 SV=1

 Score =  133 bits (335), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 67/136 (49%), Positives = 96/136 (70%), Gaps = 4/136 (2%)

Query: 37  MRAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDADADYVCRKVLNMRLFPNENT 96
           M+AVVQRV  ASV V G  +S IG G+ VL+G+   DT  + +++ RK+LN+R+F +E +
Sbjct: 1   MKAVVQRVTRASVTVGGEQISAIGRGICVLLGISLEDTQKELEHMVRKILNLRVFEDE-S 59

Query: 97  GKGWDLNVMQKKYGVLLVSQFTLYGILKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNP 156
           GK W  +VM K+Y VL VSQFTL  +LKGNKPDFH+AMP ++A+ FY   +++ RK+Y P
Sbjct: 60  GKHWSKSVMDKQYEVLCVSQFTLQCVLKGNKPDFHLAMPAEQAESFYKGFLEQLRKAYRP 119

Query: 157 DAIK-GKCA--FQLHL 169
           + +K GK     Q+H+
Sbjct: 120 ELVKDGKFGAYMQVHI 135

Hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr). Could be a defense mechanism against a harmful effect of D-tyrosine.

Bos taurus (taxid: 9913)

EC: 3

EC: .

EC: 1

EC: .

EC: -

EC: .

EC: -

>sp|C5CGW6|DTD_KOSOT D-tyrosyl-tRNA(Tyr) deacylase OS=Kosmotoga olearia (strain TBF 19.5.1) GN=dtd PE=3 SV=1

 Score =  105 bits (263), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 58/136 (42%), Positives = 90/136 (66%), Gaps = 7/136 (5%)

Query: 37  MRAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDADADYVCRKVLNMRLFPNENT 96
           MRAVVQRV+ A V+V+G++V +I  GL+VL+G+ + DT+ D D++  K+LN+R+F +E T
Sbjct: 1   MRAVVQRVSEAEVKVDGKIVGKISDGLMVLLGVQKDDTEKDLDWMLEKILNLRIFEDE-T 59

Query: 97  GKGWDLNVMQKKYGVLLVSQFTLYG-ILKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYN 155
           GK  +L++++K   ++LVSQFTL G   KG +P F  A PP KAK  +D  V K  +  +
Sbjct: 60  GK-MNLSLLEKGGQLMLVSQFTLLGDARKGRRPSFTEAAPPDKAKEIFDRFVKKASERVH 118

Query: 156 PDAIKGKCAFQLHLVL 171
            +       FQ H+++
Sbjct: 119 VET----GVFQAHMLV 130

Hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr). Could be a defense mechanism against a harmful effect of D-tyrosine.

Kosmotoga olearia (strain TBF 19.5.1) (taxid: 521045)

EC: 3

EC: .

EC: 1

EC: .

EC: -

EC: .

EC: -

>sp|Q01RT2|DTD_SOLUE D-tyrosyl-tRNA(Tyr) deacylase OS=Solibacter usitatus (strain Ellin6076) GN=dtd PE=3 SV=1

 Score = 99.8 bits (247), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 56/121 (46%), Positives = 75/121 (61%), Gaps = 3/121 (2%)

Query: 37  MRAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDADADYVCRKVLNMRLFPNENT 96
           M+ V+QRV+ A V VEG  V  I  GL+VLVG+ + DT  DADY+  KVL +R+FP +N 
Sbjct: 1   MKLVIQRVSQAHVNVEGTTVGAIRTGLVVLVGISKSDTIKDADYLADKVLGLRIFP-DNE 59

Query: 97  GKGWDLNVMQKKYGVLLVSQFTLYG-ILKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYN 155
           GK  + NV +    +L++SQFTLYG   +G +P F  A  P +A   Y+  VD  RKS  
Sbjct: 60  GK-MNRNVAEAHGAILIISQFTLYGDCRRGRRPSFDAAAAPGEALTLYNYFVDTVRKSPV 118

Query: 156 P 156
           P
Sbjct: 119 P 119

Hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr). Could be a defense mechanism against a harmful effect of D-tyrosine.

Solibacter usitatus (strain Ellin6076) (taxid: 234267)

EC: 3

EC: .

EC: 1

EC: .

EC: -

EC: .

EC: -

>sp|B7K3F6|DTD_CYAP8 D-tyrosyl-tRNA(Tyr) deacylase OS=Cyanothece sp. (strain PCC 8801) GN=dtd PE=3 SV=1

 Score = 99.4 bits (246), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 49/118 (41%), Positives = 73/118 (61%), Gaps = 1/118 (0%)

Query: 37  MRAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDADADYVCRKVLNMRLFPNENT 96
           MR ++QRV  +SV V G +V +I  GL +LVG+   DT+++ D++ RK L +RLFP E  
Sbjct: 1   MRVIIQRVKGSSVRVNGEIVGQISRGLNLLVGIGNNDTESELDWMTRKCLELRLFPAEEG 60

Query: 97  GKGWDLNVMQKKYGVLLVSQFTLYG-ILKGNKPDFHVAMPPQKAKPFYDSLVDKFRKS 153
           G  W+ +V + +  +L++SQFTLYG   KG +P F  +  P  AK  YD  V + + S
Sbjct: 61  GDRWEKSVQEIQGELLVISQFTLYGDCRKGRRPSFSDSASPSIAKTLYDQFVAQLKDS 118

Hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr). Could be a defense mechanism against a harmful effect of D-tyrosine.

Cyanothece sp. (strain PCC 8801) (taxid: 41431)

EC: 3

EC: .

EC: 1

EC: .

EC: -

EC: .

EC: -

>sp|Q1IHZ8|DTD_KORVE D-tyrosyl-tRNA(Tyr) deacylase OS=Koribacter versatilis (strain Ellin345) GN=dtd PE=3 SV=2

 Score = 99.4 bits (246), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 52/116 (44%), Positives = 76/116 (65%), Gaps = 3/116 (2%)

Query: 37  MRAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDADADYVCRKVLNMRLFPNENT 96
           MR VVQRV+ ASV VEGR+   I  GLLVL+G+ + D +++A+Y+  K+  +R+F +EN 
Sbjct: 1   MRTVVQRVSRASVTVEGRISGAIERGLLVLLGVGQDDAESEAEYLAEKIAGLRIFEDEN- 59

Query: 97  GKGWDLNVMQKKYGVLLVSQFTLYG-ILKGNKPDFHVAMPPQKAKPFYDSLVDKFR 151
            +  +L+V+     VL VSQFTLYG + KG +P F  A  P++AK  Y+  V + R
Sbjct: 60  -EKMNLSVVDVGGAVLAVSQFTLYGDVRKGKRPSFDAAARPERAKELYEYFVAQIR 114

Hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr). Could be a defense mechanism against a harmful effect of D-tyrosine.

Koribacter versatilis (strain Ellin345) (taxid: 204669)

EC: 3

EC: .

EC: 1

EC: .

EC: -

EC: .

EC: -

>sp|Q74FT1|DTD_GEOSL D-tyrosyl-tRNA(Tyr) deacylase OS=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) GN=dtd PE=3 SV=1

 Score = 99.0 bits (245), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 56/136 (41%), Positives = 84/136 (61%), Gaps = 4/136 (2%)

Query: 37  MRAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDADADYVCRKVLNMRLFPNENT 96
           M+AV+QRV+ A VEV+G  V  IG G+LVL+G+ + DT+ DA ++  K+  +R+F  ++ 
Sbjct: 1   MKAVIQRVSEARVEVDGSTVGAIGRGILVLLGVEKGDTERDAAWLAEKMAGLRIF-EDDA 59

Query: 97  GKGWDLNVMQKKYGVLLVSQFTLYG-ILKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYN 155
           GK  +L+V + +  +L VSQFTL G   KG +P F  A PP + K  YD  VD  R++  
Sbjct: 60  GK-MNLSVREVEGSILAVSQFTLAGNCAKGRRPSFDTAAPPDEGKRLYDRFVDLIRETGI 118

Query: 156 PDAIKG-KCAFQLHLV 170
           P A    +   ++HLV
Sbjct: 119 PTATGIFQADMKVHLV 134

Hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr). Could be a defense mechanism against a harmful effect of D-tyrosine.

Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) (taxid: 243231)

EC: 3

EC: .

EC: 1

EC: .

EC: -

EC: .

EC: -

>sp|A5D3E0|DTD_PELTS D-tyrosyl-tRNA(Tyr) deacylase OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=dtd PE=3 SV=1

 Score = 99.0 bits (245), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 57/118 (48%), Positives = 76/118 (64%), Gaps = 5/118 (4%)

Query: 37  MRAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDADADYVCRKVLNMRLFPNENT 96
           MRAVVQRVA  SV VEG +  E+  GL+VL+G+   DTD DA Y+  KV NMR+F +   
Sbjct: 1   MRAVVQRVARGSVTVEGSVRGEVERGLVVLLGVGRGDTDDDAGYLADKVANMRIFED--- 57

Query: 97  GKG-WDLNVMQKKYGVLLVSQFTLYG-ILKGNKPDFHVAMPPQKAKPFYDSLVDKFRK 152
           G+G  +L+V+  K  VL VSQFTLYG   KG +P F  A PP++A+  ++  V +  K
Sbjct: 58  GQGKMNLSVLDVKGSVLAVSQFTLYGDCRKGRRPGFSGAAPPEEARRLFELFVKELEK 115

Hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr). Could be a defense mechanism against a harmful effect of D-tyrosine.

Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) (taxid: 370438)

EC: 3

EC: .

EC: 1

EC: .

EC: -

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	206
255563036	196	D-tyrosyl-tRNA(Tyr) deacylase, putative	0.752	0.790	0.735	4e-62
224116382	201	predicted protein [Populus trichocarpa]	0.752	0.771	0.731	6e-62
225443539	182	PREDICTED: D-tyrosyl-tRNA(Tyr) deacylase	0.694	0.785	0.75	4e-61
297740459	162	unnamed protein product [Vitis vinifera]	0.601	0.765	0.854	2e-58
2832652	190	putative protein [Arabidopsis thaliana]	0.694	0.752	0.694	7e-57
449462107	152	PREDICTED: D-tyrosyl-tRNA(Tyr) deacylase	0.601	0.815	0.838	2e-56
297800210	153	D-Tyr-tRNA deacylase family protein [Ara	0.601	0.810	0.806	2e-56
22328775	153	D-tyrosyl-tRNA(Tyr)deacylase [Arabidopsi	0.601	0.810	0.806	6e-56
115435596	177	Os01g0242500 [Oryza sativa Japonica Grou	0.601	0.700	0.822	2e-54
357129263	177	PREDICTED: D-tyrosyl-tRNA(Tyr) deacylase	0.601	0.700	0.814	4e-54

>gi|255563036|ref|XP_002522522.1| D-tyrosyl-tRNA(Tyr) deacylase, putative [Ricinus communis] gi|223538213|gb|EEF39822.1| D-tyrosyl-tRNA(Tyr) deacylase, putative [Ricinus communis]

 Score =  243 bits (619), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 117/159 (73%), Positives = 130/159 (81%), Gaps = 4/159 (2%)

Query: 2   YAISWLPSFPINLARSRSRKLNKTQLHNRKRQINAMRAVVQRVASASVEVEGRLVSEIGP 61
           Y IS L S    L   R+     T+    K QI AMRAVVQRV+SASVEV+G  VSEIGP
Sbjct: 4   YCISTLSS----LTTLRNINTRPTRATTSKLQIRAMRAVVQRVSSASVEVDGNTVSEIGP 59

Query: 62  GLLVLVGLHEFDTDADADYVCRKVLNMRLFPNENTGKGWDLNVMQKKYGVLLVSQFTLYG 121
           GL+VLVGLHE DTD+DADY+CRKVLNMRLFPNE TG+ WD NVMQ+ YGVLLVSQFTLYG
Sbjct: 60  GLVVLVGLHESDTDSDADYICRKVLNMRLFPNETTGRAWDQNVMQRNYGVLLVSQFTLYG 119

Query: 122 ILKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNPDAIK 160
           I+KGNKPDFHVAMPPQKAKPFYDS+V++FRKSY PDAIK
Sbjct: 120 IMKGNKPDFHVAMPPQKAKPFYDSVVEQFRKSYTPDAIK 158

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224116382|ref|XP_002331968.1| predicted protein [Populus trichocarpa] gi|222874745|gb|EEF11876.1| predicted protein [Populus trichocarpa]

 Score =  242 bits (618), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 117/160 (73%), Positives = 135/160 (84%), Gaps = 5/160 (3%)

Query: 2   YAISWLPSFPINLARSRSRKLNKTQLHNRKR-QINAMRAVVQRVASASVEVEGRLVSEIG 60
           +++S LPSF    A+S  +   K+   + K  QI AMRAVVQRV SASVEV+G +VSEIG
Sbjct: 6   HSLSTLPSF----AKSADKTAKKSTFASCKTLQIRAMRAVVQRVTSASVEVDGHMVSEIG 61

Query: 61  PGLLVLVGLHEFDTDADADYVCRKVLNMRLFPNENTGKGWDLNVMQKKYGVLLVSQFTLY 120
           PGLLVLVGLHE DTD++ADY+CRKVLNMRLF NE+TG+GWD NVMQ+ Y VLLVSQFTLY
Sbjct: 62  PGLLVLVGLHESDTDSNADYICRKVLNMRLFTNESTGRGWDQNVMQRNYEVLLVSQFTLY 121

Query: 121 GILKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNPDAIK 160
           G+LKGNKPDFHVAMPPQKAKPFY+SLVDKFRK+Y PDAIK
Sbjct: 122 GVLKGNKPDFHVAMPPQKAKPFYESLVDKFRKAYRPDAIK 161

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225443539|ref|XP_002277179.1| PREDICTED: D-tyrosyl-tRNA(Tyr) deacylase-like [Vitis vinifera]

 Score =  239 bits (611), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 111/148 (75%), Positives = 130/148 (87%), Gaps = 5/148 (3%)

Query: 13  NLARSRSRKLNKTQLHNRKRQINAMRAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEF 72
           ++ R++ R +++     R+ Q+ AMRA+VQRV+SASVEVEGR+VSEIGPGLLVLVG+HE 
Sbjct: 11  SIIRTKHRSVSR-----RRAQVRAMRAIVQRVSSASVEVEGRIVSEIGPGLLVLVGVHES 65

Query: 73  DTDADADYVCRKVLNMRLFPNENTGKGWDLNVMQKKYGVLLVSQFTLYGILKGNKPDFHV 132
           DTD+DADY+CRKVLNMRLFPNE TG+ WD +V+QK YGVLLVSQFTLYGILKGNKPDFHV
Sbjct: 66  DTDSDADYICRKVLNMRLFPNETTGRAWDQSVVQKNYGVLLVSQFTLYGILKGNKPDFHV 125

Query: 133 AMPPQKAKPFYDSLVDKFRKSYNPDAIK 160
           AMPPQKAKPFY S VD+FR SYNPDAIK
Sbjct: 126 AMPPQKAKPFYASFVDRFRTSYNPDAIK 153

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297740459|emb|CBI30641.3| unnamed protein product [Vitis vinifera]

 Score =  231 bits (588), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 106/124 (85%), Positives = 116/124 (93%)

Query: 37  MRAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDADADYVCRKVLNMRLFPNENT 96
           MRA+VQRV+SASVEVEGR+VSEIGPGLLVLVG+HE DTD+DADY+CRKVLNMRLFPNE T
Sbjct: 1   MRAIVQRVSSASVEVEGRIVSEIGPGLLVLVGVHESDTDSDADYICRKVLNMRLFPNETT 60

Query: 97  GKGWDLNVMQKKYGVLLVSQFTLYGILKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNP 156
           G+ WD +V+QK YGVLLVSQFTLYGILKGNKPDFHVAMPPQKAKPFY S VD+FR SYNP
Sbjct: 61  GRAWDQSVVQKNYGVLLVSQFTLYGILKGNKPDFHVAMPPQKAKPFYASFVDRFRTSYNP 120

Query: 157 DAIK 160
           DAIK
Sbjct: 121 DAIK 124

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|2832652|emb|CAA16727.1| putative protein [Arabidopsis thaliana] gi|7268640|emb|CAB78849.1| putative protein [Arabidopsis thaliana]

 Score =  225 bits (574), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 107/154 (69%), Positives = 125/154 (81%), Gaps = 11/154 (7%)

Query: 18  RSRKLNKTQLHNRKRQINAMRAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDAD 77
           R+ +    +LH R  QI AMRAV+QRV+S+SV V+GR+VSEIGPGLLVL+G+HE DT++D
Sbjct: 25  RNLRHQSQRLHRRNCQIRAMRAVIQRVSSSSVTVDGRIVSEIGPGLLVLIGIHESDTESD 84

Query: 78  ADYV-----------CRKVLNMRLFPNENTGKGWDLNVMQKKYGVLLVSQFTLYGILKGN 126
           ADY+           CRKVLNMRLF NE TGKGWD NVMQ+ YGVLLVSQFTLYG LKGN
Sbjct: 85  ADYILQILKLKHVYRCRKVLNMRLFSNETTGKGWDQNVMQRNYGVLLVSQFTLYGFLKGN 144

Query: 127 KPDFHVAMPPQKAKPFYDSLVDKFRKSYNPDAIK 160
           KPDFHVAMPP KAKPFY SLV+KF+K+YNPDA+K
Sbjct: 145 KPDFHVAMPPDKAKPFYASLVEKFQKAYNPDAVK 178

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449462107|ref|XP_004148783.1| PREDICTED: D-tyrosyl-tRNA(Tyr) deacylase-like [Cucumis sativus] gi|449515629|ref|XP_004164851.1| PREDICTED: D-tyrosyl-tRNA(Tyr) deacylase-like [Cucumis sativus]

 Score =  224 bits (571), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 104/124 (83%), Positives = 116/124 (93%)

Query: 37  MRAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDADADYVCRKVLNMRLFPNENT 96
           MRAVVQRVASASV+V+GR VSEIGPGLLVLVGLH+ D+D DA+Y+CRKVLNMRLFPNE+T
Sbjct: 1   MRAVVQRVASASVQVDGRTVSEIGPGLLVLVGLHDSDSDTDAEYICRKVLNMRLFPNEST 60

Query: 97  GKGWDLNVMQKKYGVLLVSQFTLYGILKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNP 156
           GK WDLNVMQK Y VLLVSQFTLYG+LKGNKPDFHVAMPPQ+AKPFY S+V++F KSYNP
Sbjct: 61  GKAWDLNVMQKNYEVLLVSQFTLYGMLKGNKPDFHVAMPPQRAKPFYASVVERFGKSYNP 120

Query: 157 DAIK 160
           DAIK
Sbjct: 121 DAIK 124

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297800210|ref|XP_002867989.1| D-Tyr-tRNA deacylase family protein [Arabidopsis lyrata subsp. lyrata] gi|297313825|gb|EFH44248.1| D-Tyr-tRNA deacylase family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  224 bits (570), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 100/124 (80%), Positives = 115/124 (92%)

Query: 37  MRAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDADADYVCRKVLNMRLFPNENT 96
           MRAV+QRV+S+SV V+GR+VSEIGPGLLVL+G+HE DTD+DADY+CRKVLNMRLF NE T
Sbjct: 1   MRAVIQRVSSSSVTVDGRIVSEIGPGLLVLIGIHESDTDSDADYICRKVLNMRLFSNETT 60

Query: 97  GKGWDLNVMQKKYGVLLVSQFTLYGILKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNP 156
           GKGWD NVMQ+ YG+LLVSQFTLYG LKGNKPDFHVAMPP KAKPFY SLV+KF+K+YNP
Sbjct: 61  GKGWDQNVMQRNYGILLVSQFTLYGFLKGNKPDFHVAMPPDKAKPFYASLVEKFQKAYNP 120

Query: 157 DAIK 160
           DA+K
Sbjct: 121 DAVK 124

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|22328775|ref|NP_193582.2| D-tyrosyl-tRNA(Tyr)deacylase [Arabidopsis thaliana] gi|17473902|gb|AAL38369.1| RNA helicase - like protein [Arabidopsis thaliana] gi|24899807|gb|AAN65118.1| RNA helicase - like protein [Arabidopsis thaliana] gi|332658649|gb|AEE84049.1| D-tyrosyl-tRNA(Tyr)deacylase [Arabidopsis thaliana]

 Score =  222 bits (566), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 100/124 (80%), Positives = 115/124 (92%)

Query: 37  MRAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDADADYVCRKVLNMRLFPNENT 96
           MRAV+QRV+S+SV V+GR+VSEIGPGLLVL+G+HE DT++DADY+CRKVLNMRLF NE T
Sbjct: 1   MRAVIQRVSSSSVTVDGRIVSEIGPGLLVLIGIHESDTESDADYICRKVLNMRLFSNETT 60

Query: 97  GKGWDLNVMQKKYGVLLVSQFTLYGILKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNP 156
           GKGWD NVMQ+ YGVLLVSQFTLYG LKGNKPDFHVAMPP KAKPFY SLV+KF+K+YNP
Sbjct: 61  GKGWDQNVMQRNYGVLLVSQFTLYGFLKGNKPDFHVAMPPDKAKPFYASLVEKFQKAYNP 120

Query: 157 DAIK 160
           DA+K
Sbjct: 121 DAVK 124

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|115435596|ref|NP_001042556.1| Os01g0242500 [Oryza sativa Japonica Group] gi|56784580|dbj|BAD81627.1| putative histidyl-tRNA synthetase 2 [Oryza sativa Japonica Group] gi|113532087|dbj|BAF04470.1| Os01g0242500 [Oryza sativa Japonica Group] gi|125525130|gb|EAY73244.1| hypothetical protein OsI_01121 [Oryza sativa Indica Group] gi|125569699|gb|EAZ11214.1| hypothetical protein OsJ_01069 [Oryza sativa Japonica Group] gi|215707135|dbj|BAG93595.1| unnamed protein product [Oryza sativa Japonica Group]

 Score =  217 bits (553), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 102/124 (82%), Positives = 113/124 (91%)

Query: 37  MRAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDADADYVCRKVLNMRLFPNENT 96
           MRAVVQRV SASVEVEGR+VS IGPGLLVLVG+HE DTDADADY+CRKVLNMRLFPNE T
Sbjct: 1   MRAVVQRVLSASVEVEGRVVSAIGPGLLVLVGVHEADTDADADYICRKVLNMRLFPNEKT 60

Query: 97  GKGWDLNVMQKKYGVLLVSQFTLYGILKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNP 156
            K WD +V+Q+K+ VLLVSQFTLYGILKGNKPDFHVAMPP KAKPFY SLV+KF+KSY+ 
Sbjct: 61  EKAWDQSVLQRKFEVLLVSQFTLYGILKGNKPDFHVAMPPAKAKPFYASLVEKFQKSYSA 120

Query: 157 DAIK 160
           DA+K
Sbjct: 121 DAVK 124

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357129263|ref|XP_003566284.1| PREDICTED: D-tyrosyl-tRNA(Tyr) deacylase-like [Brachypodium distachyon]

 Score =  216 bits (550), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 101/124 (81%), Positives = 111/124 (89%)

Query: 37  MRAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDADADYVCRKVLNMRLFPNENT 96
           MRAVVQRV SASVEVEGR+VS IGPGLLVLVG+HE DTD+DADY+CRKVLNMRLFPNE T
Sbjct: 1   MRAVVQRVLSASVEVEGRVVSAIGPGLLVLVGVHEADTDSDADYICRKVLNMRLFPNEKT 60

Query: 97  GKGWDLNVMQKKYGVLLVSQFTLYGILKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNP 156
           GK WD +VMQ+ + VLLVSQFTLYGILKGNKPDFHVAMPP KAKPFY SLV+KF+KSY  
Sbjct: 61  GKAWDQSVMQRNFEVLLVSQFTLYGILKGNKPDFHVAMPPAKAKPFYTSLVEKFQKSYTN 120

Query: 157 DAIK 160
           D +K
Sbjct: 121 DTVK 124

Source: Brachypodium distachyon

Species: Brachypodium distachyon

Genus: Brachypodium

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	206
TAIR|locus:2124519	153	AT4G18460 [Arabidopsis thalian	0.524	0.705	0.824	1.6e-47
UNIPROTKB|J9P7T2	314	DTD1 "D-tyrosyl-tRNA(Tyr) deac	0.781	0.512	0.385	1.9e-26
UNIPROTKB|E1BRV8	207	DTD1 "D-tyrosyl-tRNA(Tyr) deac	0.563	0.560	0.483	6.6e-26
UNIPROTKB|Q8TEA8	209	DTD1 "D-tyrosyl-tRNA(Tyr) deac	0.563	0.555	0.475	6.6e-26
MGI|MGI:1913294	209	Dtd1 "D-tyrosyl-tRNA deacylase	0.563	0.555	0.475	8.4e-26
ZFIN|ZDB-GENE-040801-175	207	hars2 "histidyl-tRNA synthetas	0.567	0.565	0.453	8.4e-26
RGD|1311821	174	Dtd1 "D-tyrosyl-tRNA deacylase	0.563	0.666	0.475	1.4e-25
UNIPROTKB|Q2T9V8	209	DTD1 "D-tyrosyl-tRNA(Tyr) deac	0.563	0.555	0.466	2.2e-25
UNIPROTKB|F1SBH1	209	DTD1 "D-tyrosyl-tRNA(Tyr) deac	0.563	0.555	0.475	2.2e-25
DICTYBASE|DDB_G0291273	151	dtd "D-tyrosyl-tRNA(Tyr) deacy	0.524	0.715	0.481	7.6e-25

TAIR|locus:2124519 AT4G18460 [Arabidopsis thaliana (taxid:3702)]

 Score = 497 (180.0 bits), Expect = 1.6e-47, P = 1.6e-47
 Identities = 89/108 (82%), Positives = 100/108 (92%)

Query:    53 GRLVSEIGPGLLVLVGLHEFDTDADADYVCRKVLNMRLFPNENTGKGWDLNVMQKKYGVL 112
             GR+VSEIGPGLLVL+G+HE DT++DADY+CRKVLNMRLF NE TGKGWD NVMQ+ YGVL
Sbjct:    17 GRIVSEIGPGLLVLIGIHESDTESDADYICRKVLNMRLFSNETTGKGWDQNVMQRNYGVL 76

Query:   113 LVSQFTLYGILKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNPDAIK 160
             LVSQFTLYG LKGNKPDFHVAMPP KAKPFY SLV+KF+K+YNPDA+K
Sbjct:    77 LVSQFTLYGFLKGNKPDFHVAMPPDKAKPFYASLVEKFQKAYNPDAVK 124

GO:0005737 "cytoplasm" evidence=ISM;IEA;ISS

GO:0016788 "hydrolase activity, acting on ester bonds" evidence=IEA;ISS

GO:0019478 "D-amino acid catabolic process" evidence=IEA;ISS

UNIPROTKB|J9P7T2 DTD1 "D-tyrosyl-tRNA(Tyr) deacylase" [Canis lupus familiaris (taxid:9615)]

 Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
 Identities = 66/171 (38%), Positives = 102/171 (59%)

Query:     8 PSFPINLA----RSRSRKLNKTQLHNRKR--QINAMXXXXXXXXXXXXXXXGRLVSEIGP 61
             P FP++ A    R  +R++ + +     R     AM               G  +S IG 
Sbjct:    71 PRFPVSPAEGAGRHAARRVARPEERGAARLAAAAAMKAVVQRVTRASVPVGGEQISAIGR 130

Query:    62 GLLVLVGLHEFDTDADADYVCRKVLNMRLFPNENTGKGWDLNVMQKKYGVLLVSQFTLYG 121
             G+ VL+G+   DT  + +++ RK+LN+R+F +E+ GK W  +VM K+Y VL +SQFTL  
Sbjct:   131 GICVLLGISLEDTQKELEHMVRKILNLRVFEDES-GKHWSKSVMDKQYEVLCISQFTLQC 189

Query:   122 ILKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNPDAIK-GKCA--FQLHL 169
             +LKGNKPDFH+AMP ++A+ FY+S +++ RK+Y P+ IK GK     Q+H+
Sbjct:   190 VLKGNKPDFHLAMPTEQAESFYNSFLEQLRKTYRPELIKDGKFGTYMQVHI 240

GO:0005737 "cytoplasm" evidence=IEA

GO:0019478 "D-amino acid catabolic process" evidence=IEA

GO:0016788 "hydrolase activity, acting on ester bonds" evidence=IEA

UNIPROTKB|E1BRV8 DTD1 "D-tyrosyl-tRNA(Tyr) deacylase" [Gallus gallus (taxid:9031)]

 Score = 293 (108.2 bits), Expect = 6.6e-26, P = 6.6e-26
 Identities = 58/120 (48%), Positives = 86/120 (71%)

Query:    53 GRLVSEIGPGLLVLVGLHEFDTDADADYVCRKVLNMRLFPNENTGKGWDLNVMQKKYGVL 112
             G  +S IG GL VL+G+   DT  + +++ RK+LN+R+F +E+ GK W  +VM K+Y VL
Sbjct:    17 GEQISSIGRGLCVLLGISLEDTQRELEHMVRKILNLRVFEDES-GKHWSKSVMDKQYEVL 75

Query:   113 LVSQFTLYGILKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNPDAIK-GKCA--FQLHL 169
              VSQFTL  ILKGNKPD+H+AMP ++A+ FY++ +++ RK+Y P+ IK GK     Q+H+
Sbjct:    76 CVSQFTLQCILKGNKPDYHMAMPTEQAESFYNNFLEQLRKAYKPELIKDGKFGAYMQVHI 135

GO:0016788 "hydrolase activity, acting on ester bonds" evidence=IEA

GO:0019478 "D-amino acid catabolic process" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005730 "nucleolus" evidence=IEA

UNIPROTKB|Q8TEA8 DTD1 "D-tyrosyl-tRNA(Tyr) deacylase 1" [Homo sapiens (taxid:9606)]

 Score = 293 (108.2 bits), Expect = 6.6e-26, P = 6.6e-26
 Identities = 57/120 (47%), Positives = 86/120 (71%)

Query:    53 GRLVSEIGPGLLVLVGLHEFDTDADADYVCRKVLNMRLFPNENTGKGWDLNVMQKKYGVL 112
             G  +S IG G+ VL+G+   DT  + +++ RK+LN+R+F +E+ GK W  +VM K+Y +L
Sbjct:    17 GEQISAIGRGICVLLGISLEDTQKELEHMVRKILNLRVFEDES-GKHWSKSVMDKQYEIL 75

Query:   113 LVSQFTLYGILKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNPDAIK-GKCA--FQLHL 169
              VSQFTL  +LKGNKPDFH+AMP ++A+ FY+S +++ RK+Y P+ IK GK     Q+H+
Sbjct:    76 CVSQFTLQCVLKGNKPDFHLAMPTEQAEGFYNSFLEQLRKTYRPELIKDGKFGAYMQVHI 135

GO:0016788 "hydrolase activity, acting on ester bonds" evidence=IEA

GO:0019478 "D-amino acid catabolic process" evidence=IEA

GO:0005730 "nucleolus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

MGI|MGI:1913294 Dtd1 "D-tyrosyl-tRNA deacylase 1" [Mus musculus (taxid:10090)]

 Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
 Identities = 57/120 (47%), Positives = 86/120 (71%)

Query:    53 GRLVSEIGPGLLVLVGLHEFDTDADADYVCRKVLNMRLFPNENTGKGWDLNVMQKKYGVL 112
             G  +S IG G+ VL+G+   D+  + +++ RK+LN+R+F +E+ GK W  +VM K+Y VL
Sbjct:    17 GEQISAIGRGICVLLGISMEDSQKELEHMVRKILNLRVFEDES-GKHWSKSVMDKEYEVL 75

Query:   113 LVSQFTLYGILKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNPDAIK-GKCA--FQLHL 169
              VSQFTL  +LKGNKPDFH+AMP ++A+ FY+S +++ RKSY P+ I+ GK     Q+H+
Sbjct:    76 CVSQFTLQCVLKGNKPDFHLAMPTEQAESFYNSFLEQLRKSYRPELIRDGKFGAYMQVHI 135

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0016787 "hydrolase activity" evidence=IEA

GO:0016788 "hydrolase activity, acting on ester bonds" evidence=IEA

GO:0019478 "D-amino acid catabolic process" evidence=IEA

ZFIN|ZDB-GENE-040801-175 hars2 "histidyl-tRNA synthetase 2, mitochondrial (putative)" [Danio rerio (taxid:7955)]

 Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
 Identities = 54/119 (45%), Positives = 86/119 (72%)

Query:    56 VSEIGPGLLVLVGLHEFDTDADADYVCRKVLNMRLFPNENTGKGWDLNVMQKKYGVLLVS 115
             +S IG GL VL+G+   DT  D DY+ RK+LN+R+F +EN G+ W  +VM  +  VL VS
Sbjct:    20 ISSIGRGLCVLLGISAEDTQKDVDYMVRKILNLRVFEDEN-GRAWSRSVMDGELEVLCVS 78

Query:   116 QFTLYGILKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNPDAIK-GKCAFQLHLVLRS 173
             QFTL  +LKGNKPD+H AMP + A+PFY++++++ R++Y P+ IK G+   ++ +++++
Sbjct:    79 QFTLQCLLKGNKPDYHAAMPAELAQPFYNNMLEQLRETYKPELIKDGQFGAKMQVLIQN 137

GO:0016788 "hydrolase activity, acting on ester bonds" evidence=IEA

GO:0019478 "D-amino acid catabolic process" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0004812 "aminoacyl-tRNA ligase activity" evidence=IEA

GO:0016787 "hydrolase activity" evidence=IEA

RGD|1311821 Dtd1 "D-tyrosyl-tRNA deacylase 1" [Rattus norvegicus (taxid:10116)]

 Score = 290 (107.1 bits), Expect = 1.4e-25, P = 1.4e-25
 Identities = 57/120 (47%), Positives = 85/120 (70%)

Query:    53 GRLVSEIGPGLLVLVGLHEFDTDADADYVCRKVLNMRLFPNENTGKGWDLNVMQKKYGVL 112
             G  +S IG G+ VL+G+   DT  + +++ RK+LN+R+F +E+ GK W  +VM K+Y VL
Sbjct:    17 GEQISAIGRGICVLLGISMEDTQKELEHMVRKILNLRVFEDES-GKHWSKSVMDKEYEVL 75

Query:   113 LVSQFTLYGILKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNPDAIK-GKCA--FQLHL 169
              VSQFTL  +LKGNKPD H+AMP ++A+ FY+S +++ RKSY P+ I+ GK     Q+H+
Sbjct:    76 CVSQFTLQCVLKGNKPDLHLAMPTEQAESFYNSFLEQLRKSYRPELIRDGKFGAYMQVHI 135

GO:0004812 "aminoacyl-tRNA ligase activity" evidence=IEA

GO:0005730 "nucleolus" evidence=ISO

GO:0005737 "cytoplasm" evidence=IEA;ISO

GO:0016788 "hydrolase activity, acting on ester bonds" evidence=IEA

GO:0019478 "D-amino acid catabolic process" evidence=IEA

UNIPROTKB|Q2T9V8 DTD1 "D-tyrosyl-tRNA(Tyr) deacylase 1" [Bos taurus (taxid:9913)]

 Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
 Identities = 56/120 (46%), Positives = 84/120 (70%)

Query:    53 GRLVSEIGPGLLVLVGLHEFDTDADADYVCRKVLNMRLFPNENTGKGWDLNVMQKKYGVL 112
             G  +S IG G+ VL+G+   DT  + +++ RK+LN+R+F +E+ GK W  +VM K+Y VL
Sbjct:    17 GEQISAIGRGICVLLGISLEDTQKELEHMVRKILNLRVFEDES-GKHWSKSVMDKQYEVL 75

Query:   113 LVSQFTLYGILKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNPDAIK-GKCA--FQLHL 169
              VSQFTL  +LKGNKPDFH+AMP ++A+ FY   +++ RK+Y P+ +K GK     Q+H+
Sbjct:    76 CVSQFTLQCVLKGNKPDFHLAMPAEQAESFYKGFLEQLRKAYRPELVKDGKFGAYMQVHI 135

GO:0005737 "cytoplasm" evidence=IEA

GO:0005730 "nucleolus" evidence=IEA

GO:0019478 "D-amino acid catabolic process" evidence=IEA

GO:0016788 "hydrolase activity, acting on ester bonds" evidence=IEA

UNIPROTKB|F1SBH1 DTD1 "D-tyrosyl-tRNA(Tyr) deacylase" [Sus scrofa (taxid:9823)]

 Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
 Identities = 57/120 (47%), Positives = 85/120 (70%)

Query:    53 GRLVSEIGPGLLVLVGLHEFDTDADADYVCRKVLNMRLFPNENTGKGWDLNVMQKKYGVL 112
             G  +S IG G+ VL+G+   DT  + +++ RK+LN+R+F +E  G+ W  +VM K+Y VL
Sbjct:    17 GEQISAIGRGICVLLGISLEDTQKELEHMVRKILNLRVFEDEG-GRHWAKSVMDKQYEVL 75

Query:   113 LVSQFTLYGILKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNPDAIK-GKCA--FQLHL 169
              VSQFTL  +LKGNKPDFH+AMP ++A+ FY+S +++ RK+Y P+ IK GK     Q+H+
Sbjct:    76 CVSQFTLQCVLKGNKPDFHLAMPSEQAEGFYNSFLEQLRKAYRPELIKDGKFGAYMQVHI 135

GO:0005737 "cytoplasm" evidence=IEA

GO:0005730 "nucleolus" evidence=IEA

GO:0019478 "D-amino acid catabolic process" evidence=IEA

GO:0016788 "hydrolase activity, acting on ester bonds" evidence=IEA

DICTYBASE|DDB_G0291273 dtd "D-tyrosyl-tRNA(Tyr) deacylase" [Dictyostelium discoideum (taxid:44689)]

 Score = 283 (104.7 bits), Expect = 7.6e-25, P = 7.6e-25
 Identities = 52/108 (48%), Positives = 74/108 (68%)

Query:    53 GRLVSEIGPGLLVLVGLHEFDTDADADYVCRKVLNMRLFPNENTGKGWDLNVMQKKYGVL 112
             G ++SEI  GL+ L+G+   DT  DA+Y+ RK+LN+RL+ NE+  K WD +V Q  Y +L
Sbjct:    17 GEVISEIKQGLMCLIGIGRDDTKEDAEYITRKILNLRLWKNEDGTKNWDRSVQQMDYEIL 76

Query:   113 LVSQFTLYGILKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNPDAIK 160
              VSQFTL+  LKGNK  +H+AM P+ +K FY   ++  +KSY P+ IK
Sbjct:    77 FVSQFTLFAQLKGNKQSYHLAMAPELSKQFYLDFLENAKKSYKPEKIK 124

GO:0019478 "D-amino acid catabolic process" evidence=IEA;ISS

GO:0016788 "hydrolase activity, acting on ester bonds" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA;ISS

GO:0051500 "D-tyrosyl-tRNA(Tyr) deacylase activity" evidence=ISS

GO:0016787 "hydrolase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	estExt_fgenesh4_pg.C_1870028	hypothetical protein; Hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr). Could be a defense mechanism against a harmful effect of D-tyrosine (By similarity) (202 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	eugene3.00140713	hypothetical protein (892 aa)	•						•		0.620
	gw1.I.9324.1	hypothetical protein (716 aa)	•						•		0.609
	gw1.28.724.1	histidine-tRNA ligase (EC-6.1.1.21) (441 aa)	•								0.587
	gw1.XI.1735.1	hypothetical protein (434 aa)	•								0.570
	estExt_fgenesh4_pg.C_LG_III0273	hypothetical protein (738 aa)	•						•		0.562
	estExt_fgenesh4_pg.C_LG_XVI0748	adenylosuccinate synthase (EC-6.3.4.4); Plays an important role in the de novo pathway of purin [...] (491 aa)	•								0.546
	fgenesh4_pg.C_scaffold_9806000002	Predicted protein (303 aa)	•								0.542
	CMS	SubName- Full=Putative chloroplast 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; EC [...] (230 aa)	•			•					0.530
	gw1.II.3029.1	hypothetical protein; Exchanges the guanine residue with 7-aminomethyl-7- deazaguanine in tRNAs [...] (392 aa)	•								0.528
	gw1.I.4241.1	hypothetical protein (326 aa)	•								0.525

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	206
PTZ00120	154	PTZ00120, PTZ00120, D-tyrosyl-tRNA(Tyr) deacylase;	2e-65
cd00563	145	cd00563, Dtyr_deacylase, D-Tyrosyl-tRNAtyr deacyla	6e-56
PRK05273	147	PRK05273, PRK05273, D-tyrosyl-tRNA(Tyr) deacylase;	3e-51
COG1490	145	COG1490, Dtd, D-Tyr-tRNAtyr deacylase [Translation	1e-46
pfam02580	144	pfam02580, Tyr_Deacylase, D-Tyr-tRNA(Tyr) deacylas	8e-45
TIGR00256	145	TIGR00256, TIGR00256, D-tyrosyl-tRNA(Tyr) deacylas	1e-33

>gnl|CDD|185458 PTZ00120, PTZ00120, D-tyrosyl-tRNA(Tyr) deacylase; Provisional

 Score =  198 bits (506), Expect = 2e-65
 Identities = 73/124 (58%), Positives = 92/124 (74%), Gaps = 1/124 (0%)

Query: 37  MRAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDADADYVCRKVLNMRLFPNENT 96
           MR V+QRV SASV VEG +V  IG GL++LVG+HE DT  DADY+ RK L +RL+P+E  
Sbjct: 1   MRVVIQRVLSASVTVEGEVVGSIGKGLVLLVGIHEEDTWEDADYIIRKCLKLRLWPDEG- 59

Query: 97  GKGWDLNVMQKKYGVLLVSQFTLYGILKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNP 156
           GK WD +V  K Y VL+VSQFTL+ + KGNKPDFH+AM P+ A P Y+  V+KF+K Y P
Sbjct: 60  GKMWDRSVKDKDYEVLVVSQFTLFNVKKGNKPDFHLAMSPEDALPLYNKFVEKFKKEYAP 119

Query: 157 DAIK 160
           + IK
Sbjct: 120 EKIK 123

Length = 154

>gnl|CDD|238316 cd00563, Dtyr_deacylase, D-Tyrosyl-tRNAtyr deacylases; a class of tRNA-dependent hydrolases which are capable of hydrolyzing the ester bond of D-Tyrosyl-tRNA reducing the level of cellular D-Tyrosine while recycling the peptidyl-tRNA; found in bacteria and in eukaryotes but not in archea; beta barrel-like fold structure; forms homodimers in which two surface cavities serve as the active site for tRNA binding

 Score =  173 bits (441), Expect = 6e-56
 Identities = 58/119 (48%), Positives = 79/119 (66%), Gaps = 3/119 (2%)

Query: 37  MRAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDADADYVCRKVLNMRLFPNENT 96
           MRAV+QRV+ ASV V+G +V  IG GLLVLVG+   DT+ DA+Y+ RK+LN+R+F +E  
Sbjct: 1   MRAVIQRVSEASVTVDGEVVGAIGQGLLVLVGVTHDDTEEDAEYLARKILNLRIFEDEEG 60

Query: 97  GKGWDLNVMQKKYGVLLVSQFTLYGIL-KGNKPDFHVAMPPQKAKPFYDSLVDKFRKSY 154
               +L+V      +L+VSQFTLY    KG +P F  A PP KA+P Y+S V+  R+  
Sbjct: 61  --KMNLSVKDVNGEILVVSQFTLYADTKKGRRPSFSAAAPPDKAEPLYESFVELLREKG 117

Length = 145

>gnl|CDD|235383 PRK05273, PRK05273, D-tyrosyl-tRNA(Tyr) deacylase; Provisional

 Score =  162 bits (412), Expect = 3e-51
 Identities = 61/121 (50%), Positives = 82/121 (67%), Gaps = 3/121 (2%)

Query: 37  MRAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDADADYVCRKVLNMRLFPNENT 96
           MRAV+QRV+ ASV V+G +V EIG GLLVLVG+ + DT+ DADY+  K+LN+R+F +E  
Sbjct: 1   MRAVIQRVSEASVTVDGEVVGEIGKGLLVLVGVEKGDTEEDADYLAEKILNLRIFEDEE- 59

Query: 97  GKGWDLNVMQKKYGVLLVSQFTLYG-ILKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYN 155
           GK  +L+V      +L+VSQFTLY    KG +P F  A PP++A+P YD  V+  R    
Sbjct: 60  GK-MNLSVQDVGGEILVVSQFTLYADTRKGRRPSFSAAAPPEEAEPLYDYFVEALRAQGV 118

Query: 156 P 156
           P
Sbjct: 119 P 119

Length = 147

>gnl|CDD|224407 COG1490, Dtd, D-Tyr-tRNAtyr deacylase [Translation, ribosomal structure and biogenesis]

 Score =  150 bits (380), Expect = 1e-46
 Identities = 56/121 (46%), Positives = 78/121 (64%), Gaps = 3/121 (2%)

Query: 37  MRAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDADADYVCRKVLNMRLFPNENT 96
           M+AV+QRV+SASV V+G +V  IG GLLVLVG+   DT+ DADY+  K+LN+R+F +E  
Sbjct: 1   MKAVIQRVSSASVSVDGEVVGAIGQGLLVLVGVTHDDTEEDADYLAEKILNLRIFEDEE- 59

Query: 97  GKGWDLNVMQKKYGVLLVSQFTLYG-ILKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYN 155
           GK  +L+V      +L+VSQFTLY    KG +P F  A  P +A+  Y+  V+  R+   
Sbjct: 60  GK-MNLSVQDVGGEILVVSQFTLYADTKKGRRPSFSKAAKPDQAEELYEYFVELLRELGI 118

Query: 156 P 156
            
Sbjct: 119 K 119

Length = 145

>gnl|CDD|202294 pfam02580, Tyr_Deacylase, D-Tyr-tRNA(Tyr) deacylase

 Score =  145 bits (368), Expect = 8e-45
 Identities = 54/120 (45%), Positives = 76/120 (63%), Gaps = 3/120 (2%)

Query: 38  RAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDADADYVCRKVLNMRLFPNENTG 97
           RAV+QRV  ASV V+G +V  IG GLLVLVG+ + DT+ D  Y+  K+LN+R+F +E  G
Sbjct: 1   RAVLQRVKKASVSVDGEVVGSIGRGLLVLVGVTKDDTEEDLRYLVEKILNLRIFEDEE-G 59

Query: 98  KGWDLNVMQKKYGVLLVSQFTLYG-ILKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNP 156
           K  +L++      +L+VSQFTLYG   KG +P FH A  P +A+  Y+  V   R++   
Sbjct: 60  K-MNLSLKDVGGEILIVSQFTLYGDTKKGRRPSFHAAAKPDEAEELYEKFVQLLREAGIK 118

This family comprises of several D-Tyr-tRNA(Tyr) deacylase proteins. Cell growth inhibition by several d-amino acids can be explained by an in vivo production of d-aminoacyl-tRNA molecules. Escherichia coli and yeast cells express an enzyme, d-Tyr-tRNA(Tyr) deacylase, capable of recycling such d-aminoacyl-tRNA molecules into free tRNA and d-amino acid. Accordingly, upon inactivation of the genes of the above deacylases, the toxicity of d-amino acids increases. Orthologues of the deacylase are found in many cells. Length = 144

>gnl|CDD|129358 TIGR00256, TIGR00256, D-tyrosyl-tRNA(Tyr) deacylase

 Score =  117 bits (294), Expect = 1e-33
 Identities = 51/117 (43%), Positives = 71/117 (60%), Gaps = 3/117 (2%)

Query: 37  MRAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDADADYVCRKVLNMRLFPNENT 96
           M A++QRV+ ASV VEG ++ EIG GLLVL+G+ + D +  AD +  KVLN R+F +   
Sbjct: 1   MIALIQRVSQASVTVEGEVIGEIGAGLLVLLGVEKDDDEQKADKLAEKVLNYRIFSDSE- 59

Query: 97  GKGWDLNVMQKKYGVLLVSQFTLYG-ILKGNKPDFHVAMPPQKAKPFYDSLVDKFRK 152
           GK  +LNV Q    +L VSQFTL     KG +P F     P +A+  Y+  V+  R+
Sbjct: 60  GK-MNLNVQQAGGEILSVSQFTLAADTKKGMRPSFSKGASPDRAEELYEYFVELCRE 115

This homodimeric enzyme appears able to cleave any D-amino acid (and glycine, which does not have distinct D/L forms) from charged tRNA. The name reflects characterization with respect to D-Tyr on tRNA(Tyr) as established in the literature, but substrate specificity seems much broader [Protein synthesis, tRNA aminoacylation]. Length = 145

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	206
TIGR00256	145	D-tyrosyl-tRNA(Tyr) deacylase. This homodimeric en	100.0
PRK05273	147	D-tyrosyl-tRNA(Tyr) deacylase; Provisional	100.0
PTZ00120	154	D-tyrosyl-tRNA(Tyr) deacylase; Provisional	100.0
COG1490	145	Dtd D-Tyr-tRNAtyr deacylase [Translation, ribosoma	100.0
cd00563	145	Dtyr_deacylase D-Tyrosyl-tRNAtyr deacylases; a cla	100.0
PF02580	145	Tyr_Deacylase: D-Tyr-tRNA(Tyr) deacylase; InterPro	100.0
KOG3323	149	consensus D-Tyr-tRNA (Tyr) deacylase [Translation,	100.0

>TIGR00256 D-tyrosyl-tRNA(Tyr) deacylase

Probab=100.00  E-value=1.6e-58  Score=378.32  Aligned_cols=134  Identities=40%  Similarity=0.576  Sum_probs=129.0

Q ss_pred             ceEEEEeeceeEEEECCEEEEEECCeeEEEEEeecCCCHHHHHHHHHHHhccccccCCCCCCcccccccccCCcEEEecc
Q 028617           37 MRAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDADADYVCRKVLNMRLFPNENTGKGWDLNVMQKKYGVLLVSQ  116 (206)
Q Consensus        37 MR~VIQRV~~AsV~Vdg~~vg~Ig~GLlvLVGi~~~Dteed~~~ma~KIlnLRIFeDe~gGKkmn~SV~Dv~GeILvVSQ  116 (206)
                      ||+|||||++|+|+|||+++++||+|+|+||||+++||+++++|||+||+|||||+||+ || ||+||+|++||||+|||
T Consensus         1 Mr~viQRV~~AsV~V~~~~v~~I~~GllvlvGi~~~Dt~~~~~~~~~Kil~lRif~de~-gk-~~~Sv~d~~geiL~VSQ   78 (145)
T TIGR00256         1 MIALIQRVSQASVTVEGEVIGEIGAGLLVLLGVEKDDDEQKADKLAEKVLNYRIFSDSE-GK-MNLNVQQAGGEILSVSQ   78 (145)
T ss_pred             CEEEEEEeCeEEEEECCEEEEEECCcEEEEEEecCCCCHHHHHHHHHHHhheEeccCCC-CC-ccCCHHHCCCCEEEEEC
Confidence            99999999999999999999999999999999999999999999999999999999998 65 99999999999999999


Q ss_pred             ccccccC-cCCCCCCCCCCCCCchHHHHHHHHHHHHhhCCCCccccccc---eeEEEEeccc
Q 028617          117 FTLYGIL-KGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNPDAIKGKCA---FQLHLVLRSF  174 (206)
Q Consensus       117 FTL~a~~-KGnRPsF~~Aa~pe~A~~LY~~Fv~~lr~~~~~~~V~~G~F---~qv~lv~~~~  174 (206)
                      |||||++ ||||||||.||+||+|++||++|+++|++.+  .+|++|+|   |+++++||+-
T Consensus        79 FTL~a~~~KG~rPsF~~a~~~~~A~~ly~~fv~~l~~~~--~~V~~G~FGa~M~V~l~NdGP  138 (145)
T TIGR00256        79 FTLAADTKKGMRPSFSKGASPDRAEELYEYFVELCREKG--MKVQTGRFAADMQVSLTNDGP  138 (145)
T ss_pred             CcccccCCCCCCCCccccCCHHHHHHHHHHHHHHHHhcC--CCceECccCCCcEEEEEECCC
Confidence            9999996 9999999999999999999999999999764  58999988   9999999974

This homodimeric enzyme appears able to cleave any D-amino acid (and glycine, which does not have distinct D/L forms) from charged tRNA. The name reflects characterization with respect to D-Tyr on tRNA(Tyr) as established in the literature, but substrate specificity seems much broader.

>PRK05273 D-tyrosyl-tRNA(Tyr) deacylase; Provisional

Probab=100.00  E-value=2.9e-58  Score=377.50  Aligned_cols=134  Identities=47%  Similarity=0.744  Sum_probs=129.3

Q ss_pred             ceEEEEeeceeEEEECCEEEEEECCeeEEEEEeecCCCHHHHHHHHHHHhccccccCCCCCCcccccccccCCcEEEecc
Q 028617           37 MRAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDADADYVCRKVLNMRLFPNENTGKGWDLNVMQKKYGVLLVSQ  116 (206)
Q Consensus        37 MR~VIQRV~~AsV~Vdg~~vg~Ig~GLlvLVGi~~~Dteed~~~ma~KIlnLRIFeDe~gGKkmn~SV~Dv~GeILvVSQ  116 (206)
                      ||+|||||++|+|+|||+++++||+|+|+||||+++||+++++|||+||++||||+|++ || ||+||+|++||||+|||
T Consensus         1 Mr~viQRV~~AsV~Vd~~~v~~Ig~GllvlvGi~~~Dt~~~~~~~~~Kil~lRif~d~~-gk-~~~Sv~d~~geiL~VsQ   78 (147)
T PRK05273          1 MRAVIQRVSEASVTVDGEVVGEIGKGLLVLVGVEKGDTEEDADYLAEKILNLRIFEDEE-GK-MNLSVQDVGGEILVVSQ   78 (147)
T ss_pred             CEEEEEEeceEEEEECCEEEEEECCceEEEEEEcCCCCHHHHHHHHHHHhheEcccCCC-CC-cccCHHHCCCCEEEEEc
Confidence            99999999999999999999999999999999999999999999999999999999999 75 99999999999999999


Q ss_pred             ccccccC-cCCCCCCCCCCCCCchHHHHHHHHHHHHhhCCCCccccccc---eeEEEEeccc
Q 028617          117 FTLYGIL-KGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNPDAIKGKCA---FQLHLVLRSF  174 (206)
Q Consensus       117 FTL~a~~-KGnRPsF~~Aa~pe~A~~LY~~Fv~~lr~~~~~~~V~~G~F---~qv~lv~~~~  174 (206)
                      |||||++ ||||||||.||+|++|++||++|+++|++.+  .+|++|+|   |+++++||+-
T Consensus        79 FTL~a~~~KG~rP~F~~a~~~~~A~~ly~~f~~~l~~~~--~~V~~G~FGa~M~V~l~NDGP  138 (147)
T PRK05273         79 FTLYADTRKGRRPSFSAAAPPEEAEPLYDYFVEALRAQG--VPVETGRFGADMQVSLVNDGP  138 (147)
T ss_pred             ccccccCCCCCCCCccccCCHHHHHHHHHHHHHHHHHcC--CceeecccCCCcEEEEEECCC
Confidence            9999996 9999999999999999999999999999886  47988888   9999999984

>PTZ00120 D-tyrosyl-tRNA(Tyr) deacylase; Provisional

Probab=100.00  E-value=4.5e-58  Score=378.80  Aligned_cols=137  Identities=55%  Similarity=0.880  Sum_probs=131.0

Q ss_pred             ceEEEEeeceeEEEECCEEEEEECCeeEEEEEeecCCCHHHHHHHHHHHhccccccCCCCCCcccccccccCCcEEEecc
Q 028617           37 MRAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDADADYVCRKVLNMRLFPNENTGKGWDLNVMQKKYGVLLVSQ  116 (206)
Q Consensus        37 MR~VIQRV~~AsV~Vdg~~vg~Ig~GLlvLVGi~~~Dteed~~~ma~KIlnLRIFeDe~gGKkmn~SV~Dv~GeILvVSQ  116 (206)
                      ||+|||||++|+|+|||+++++||+|+|+||||+++||+++++|||+||++||||+||+ ||+||+||+|++||||+|||
T Consensus         1 Mr~viQRV~~AsV~V~~~~v~~I~~GllvlvGi~~~Dt~~~~~~l~~Kil~lRiF~de~-gk~~n~Sv~d~~geiL~VSQ   79 (154)
T PTZ00120          1 MRVVIQRVLSASVTVEGEVVGSIGKGLVLLVGIHEEDTWEDADYIIRKCLKLRLWPDEG-GKMWDRSVKDKDYEVLVVSQ   79 (154)
T ss_pred             CEEEEEEeCeEEEEECCEEEEEECCceEEEEEEcCCCCHHHHHHHHHHHhheecccCCC-CCcccCCHhhcCCCEEEEEc
Confidence            99999999999999999999999999999999999999999999999999999999998 77689999999999999999


Q ss_pred             cccccc-CcCCCCCCCCCCCCCchHHHHHHHHHHHHhhCCCCccccccc---eeEEEEecccc
Q 028617          117 FTLYGI-LKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNPDAIKGKCA---FQLHLVLRSFS  175 (206)
Q Consensus       117 FTL~a~-~KGnRPsF~~Aa~pe~A~~LY~~Fv~~lr~~~~~~~V~~G~F---~qv~lv~~~~~  175 (206)
                      |||| + .||||||||.||+||+|++||++|+++|++.+.+.+|++|+|   |+++|+||+-=
T Consensus        80 FTL~-~~~KG~RPsF~~aa~~~~A~~Ly~~f~~~l~~~~~~~~V~~G~FGa~M~V~l~NdGPv  141 (154)
T PTZ00120         80 FTLF-NVKKGNKPDFHLAMSPEDALPLYNKFVEKFKKEYAPEKIKTGKFGQYMNVSLVNDGPV  141 (154)
T ss_pred             cccc-cCCCCCCCCccccCCHHHHHHHHHHHHHHHHhcCCCCccEECcCCCCcEEEEEECCCE
Confidence            9999 7 599999999999999999999999999999875458999998   99999999853

>COG1490 Dtd D-Tyr-tRNAtyr deacylase [Translation, ribosomal structure and biogenesis]

Probab=100.00  E-value=2.4e-58  Score=375.59  Aligned_cols=134  Identities=44%  Similarity=0.673  Sum_probs=129.2

Q ss_pred             ceEEEEeeceeEEEECCEEEEEECCeeEEEEEeecCCCHHHHHHHHHHHhccccccCCCCCCcccccccccCCcEEEecc
Q 028617           37 MRAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDADADYVCRKVLNMRLFPNENTGKGWDLNVMQKKYGVLLVSQ  116 (206)
Q Consensus        37 MR~VIQRV~~AsV~Vdg~~vg~Ig~GLlvLVGi~~~Dteed~~~ma~KIlnLRIFeDe~gGKkmn~SV~Dv~GeILvVSQ  116 (206)
                      ||+|||||++|+|+|||+++|+|++|||+|||++++||+++++||++||+|||||+|++ || ||+||+|++|+||+|||
T Consensus         1 MkaviQRV~~AsV~Vdgeivg~I~~GllvLvGV~~~Dt~~~a~~l~~Ki~~lRiF~D~~-gK-mN~sv~di~G~iL~VSQ   78 (145)
T COG1490           1 MKAVIQRVSSASVSVDGEVVGAIGQGLLVLVGVTHDDTEEDADYLAEKILNLRIFEDEE-GK-MNLSVQDVGGEILVVSQ   78 (145)
T ss_pred             CeeeeeeeeeeEEEECCEEeeecCCcEEEEEeecCCCCHHHHHHHHHHHhceEeecCcc-cc-cccCHHHcCCcEEEEEE
Confidence            99999999999999999999999999999999999999999999999999999999998 65 99999999999999999


Q ss_pred             ccccccC-cCCCCCCCCCCCCCchHHHHHHHHHHHHhhCCCCccccccc---eeEEEEeccc
Q 028617          117 FTLYGIL-KGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNPDAIKGKCA---FQLHLVLRSF  174 (206)
Q Consensus       117 FTL~a~~-KGnRPsF~~Aa~pe~A~~LY~~Fv~~lr~~~~~~~V~~G~F---~qv~lv~~~~  174 (206)
                      ||||||+ ||+||||+.||+|++|++||++|++.|++.+  .+|++|+|   |+|+|+||+-
T Consensus        79 FTL~adt~kG~RPsFs~aa~p~~A~~lYe~f~~~lr~~~--~~V~tG~FgA~M~V~LvNdGP  138 (145)
T COG1490          79 FTLYADTKKGRRPSFSKAAKPDQAEELYEYFVELLRELG--IKVETGRFGADMQVSLVNDGP  138 (145)
T ss_pred             EEEeecccCCCCCCccccCChHHHHHHHHHHHHHHHhcC--CcceeeeeeceeEEEEecCCC
Confidence            9999995 9999999999999999999999999999875  57888888   9999999984

>cd00563 Dtyr_deacylase D-Tyrosyl-tRNAtyr deacylases; a class of tRNA-dependent hydrolases which are capable of hydrolyzing the ester bond of D-Tyrosyl-tRNA reducing the level of cellular D-Tyrosine while recycling the peptidyl-tRNA; found in bacteria and in eukaryotes but not in archea; beta barrel-like fold structure; forms homodimers in which two surface cavities serve as the active site for tRNA binding

Probab=100.00  E-value=7.4e-58  Score=374.32  Aligned_cols=134  Identities=47%  Similarity=0.752  Sum_probs=129.2

Q ss_pred             ceEEEEeeceeEEEECCEEEEEECCeeEEEEEeecCCCHHHHHHHHHHHhccccccCCCCCCcccccccccCCcEEEecc
Q 028617           37 MRAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDADADYVCRKVLNMRLFPNENTGKGWDLNVMQKKYGVLLVSQ  116 (206)
Q Consensus        37 MR~VIQRV~~AsV~Vdg~~vg~Ig~GLlvLVGi~~~Dteed~~~ma~KIlnLRIFeDe~gGKkmn~SV~Dv~GeILvVSQ  116 (206)
                      ||+|||||++|+|+|||+++++||+|+|+||||+++||+++++||++||+|||||+||+ || ||+||+|++||||+|||
T Consensus         1 Mr~viQRV~~A~V~V~~~~v~~Ig~GllvlvGi~~~Dt~~~~~~~~~Kll~lRif~d~~-gk-~~~Sv~d~~gevL~VsQ   78 (145)
T cd00563           1 MRAVIQRVSEASVTVDGEVVGAIGQGLLVLVGVTHDDTEEDAEYLARKILNLRIFEDEE-GK-MNLSVKDVNGEILVVSQ   78 (145)
T ss_pred             CEEEEEEeceEEEEECCEEEEEECCcEEEEEEecCCCCHHHHHHHHHHHhheEcccCCC-CC-cccChhhcCCCEEEEEc
Confidence            99999999999999999999999999999999999999999999999999999999998 75 99999999999999999


Q ss_pred             ccccccC-cCCCCCCCCCCCCCchHHHHHHHHHHHHhhCCCCccccccc---eeEEEEeccc
Q 028617          117 FTLYGIL-KGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNPDAIKGKCA---FQLHLVLRSF  174 (206)
Q Consensus       117 FTL~a~~-KGnRPsF~~Aa~pe~A~~LY~~Fv~~lr~~~~~~~V~~G~F---~qv~lv~~~~  174 (206)
                      |||||++ ||||||||.||+||+|++||++|+++|++.+  .+|++|+|   |+++++||+-
T Consensus        79 FTL~~~~~KG~rP~F~~a~~~e~A~~ly~~fv~~l~~~~--~~V~~G~FGa~M~V~l~NDGP  138 (145)
T cd00563          79 FTLYADTKKGRRPSFSAAAPPDKAEPLYESFVELLREKG--IKVETGVFGAMMQVSLVNDGP  138 (145)
T ss_pred             cccccccCCCCCCCccccCCHHHHHHHHHHHHHHHHHcC--CcceeCccCCCcEEEEEECCC
Confidence            9999996 9999999999999999999999999999886  47988888   9999999974

>PF02580 Tyr_Deacylase: D-Tyr-tRNA(Tyr) deacylase; InterPro: IPR003732 This homodimeric enzyme appears able to cleave any D-amino acid (and glycine, which does not have distinct D/L forms) from charged tRNA

Probab=100.00  E-value=5.9e-56  Score=362.64  Aligned_cols=134  Identities=51%  Similarity=0.826  Sum_probs=121.3

Q ss_pred             eEEEEeeceeEEEECCEEEEEECCeeEEEEEeecCCCHHHHHHHHHHHhccccccCCCCCCcccccccccCCcEEEeccc
Q 028617           38 RAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDADADYVCRKVLNMRLFPNENTGKGWDLNVMQKKYGVLLVSQF  117 (206)
Q Consensus        38 R~VIQRV~~AsV~Vdg~~vg~Ig~GLlvLVGi~~~Dteed~~~ma~KIlnLRIFeDe~gGKkmn~SV~Dv~GeILvVSQF  117 (206)
                      |+|||||++|+|+|||+++++||+|+|+||||+++||+++++|||+||+|+|||+|++ || ||+||+|++||||+||||
T Consensus         1 R~ViQRV~~A~V~V~~~~~~~Ig~Glvvlvgi~~~Dt~~~~~~~~~Kil~lRif~d~~-gk-~~~Sv~d~~geiL~VsQF   78 (145)
T PF02580_consen    1 RAVIQRVSSASVTVDGEVVSSIGRGLVVLVGIGKGDTEEDVDKMARKILNLRIFEDEN-GK-WNLSVKDVGGEILLVSQF   78 (145)
T ss_dssp             EEEEEEEEEEEEEETTEEEEEESSEEEEEEEEBTT--HHHHHHHHHHHHHSEEEEETT-SS-EEEETTTTT-EEEEEE-G
T ss_pred             CEEEEEeCeEEEEECCEEEEEECCCcEEEEEEECCCCHHHHHHHHHhhceEEECcCcC-Cc-cceeHhhcccceEEEEee
Confidence            7999999999999999999999999999999999999999999999999999999998 65 999999999999999999


Q ss_pred             cccccC-cCCCCCCCCCCCCCchHHHHHHHHHHHHhhCCCCccccccc---eeEEEEeccc
Q 028617          118 TLYGIL-KGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNPDAIKGKCA---FQLHLVLRSF  174 (206)
Q Consensus       118 TL~a~~-KGnRPsF~~Aa~pe~A~~LY~~Fv~~lr~~~~~~~V~~G~F---~qv~lv~~~~  174 (206)
                      ||||++ ||||||||.||+|++|++||++|+++|++.++ .+|++|+|   |+++++||+-
T Consensus        79 TL~g~~~kG~rp~f~~a~~~~~a~~ly~~f~~~l~~~~~-~~V~~G~FGa~M~V~l~NdGP  138 (145)
T PF02580_consen   79 TLYGDTKKGNRPSFHNAAPPEEAEELYERFVEKLREEYK-PKVKTGVFGADMQVSLVNDGP  138 (145)
T ss_dssp             GGGSBCSSSSSEBGTTB--HHHHHHHHHHHHHHHHHHST-SCEEE--TTS-EEEEEEEEEE
T ss_pred             eeeeeccCCCCccccccCCHHHHHHHHHHHHHHHHHhCC-CceeECccCCeeEEEEEeCCC
Confidence            999996 99999999999999999999999999999985 48999988   9999999873

The name reflects characterisation with respect to D-Tyr on tRNA(Tyr) as established in the literature, but substrate specificity seems much broader. ; GO: 0016788 hydrolase activity, acting on ester bonds, 0019478 D-amino acid catabolic process, 0005737 cytoplasm; PDB: 3LMU_F 3LMT_B 3KNF_B 3KOC_C 3KNP_D 3KO9_F 3KO3_B 3KO5_C 3KOB_D 3LMV_E ....

>KOG3323 consensus D-Tyr-tRNA (Tyr) deacylase [Translation, ribosomal structure and biogenesis]

Probab=100.00  E-value=2.4e-55  Score=358.21  Aligned_cols=138  Identities=51%  Similarity=0.788  Sum_probs=134.3

Q ss_pred             ceEEEEeeceeEEEECCEEEEEECCeeEEEEEeecCCCHHHHHHHHHHHhccccccCCCCCCcccccccccCCcEEEecc
Q 028617           37 MRAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDADADYVCRKVLNMRLFPNENTGKGWDLNVMQKKYGVLLVSQ  116 (206)
Q Consensus        37 MR~VIQRV~~AsV~Vdg~~vg~Ig~GLlvLVGi~~~Dteed~~~ma~KIlnLRIFeDe~gGKkmn~SV~Dv~GeILvVSQ  116 (206)
                      ||+|||||++|+|+|+++.|++||+|+|+||||+++||++|+++|++||||+|+||||. ||.|.+||+|.+||||||||
T Consensus         1 mkavlQrv~~AsvtV~~~~vs~I~~Gl~vlvgi~~~dt~ed~~kmvrkiLnlrlfe~es-~k~w~ksv~dl~~eiL~VsQ   79 (149)
T KOG3323|consen    1 MKAVLQRVLRASVTVDDEQVSEIGRGLCVLVGISKDDTEEDLEKMVRKILNLRLFEDES-GKGWKKSVMDLNGEILCVSQ   79 (149)
T ss_pred             ChHHHHHhhhheEEEcceeeeeecCceEEEEEEccCCCHHHHHHHHHHHhheeeccccc-cCcccchhhhCCCCEEEEEe
Confidence            89999999999999999999999999999999999999999999999999999999997 68899999999999999999


Q ss_pred             ccccccCcCCCCCCCCCCCCCchHHHHHHHHHHHHhhCCCCccccccc---eeEEEEecccc
Q 028617          117 FTLYGILKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNPDAIKGKCA---FQLHLVLRSFS  175 (206)
Q Consensus       117 FTL~a~~KGnRPsF~~Aa~pe~A~~LY~~Fv~~lr~~~~~~~V~~G~F---~qv~lv~~~~~  175 (206)
                      |||||.+|||+||||.||++++|.+||++|++.|++.|++++|++|.|   |+++++||+--
T Consensus        80 fTL~~rlKG~kpdfH~am~~~ea~elY~qfl~~l~k~~~~~~ikdG~fGamm~v~l~n~GPv  141 (149)
T KOG3323|consen   80 FTLYGRLKGNKPDFHLAMKGEEAKELYNQFLELLRKAYGADKIKDGKFGAMMQVHLVNDGPV  141 (149)
T ss_pred             eeeeeeecCCCcchhhhcCchhhHHHHHHHHHHHHHHhCchhhhccccceEEEEEEecCCCe
Confidence            999999999999999999999999999999999999999999999988   99999999853

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	206
2okv_A	209	C-Myc Dna Unwinding Element Binding Protein Length		3e-27
3knf_A	164	Crystal Structure Of D-Tyr-Trna(Tyr) Deacylase From		5e-25
2dbo_A	148	Crystal Structure Of D-Tyr-Trna(Tyr) Deacylase From		6e-15
1jke_A	145	D-Tyr Trnatyr Deacylase From Escherichia Coli Lengt		1e-13
1j7g_A	144	Structure Of Yihz From Haemophilus Influenzae (Hi06		7e-12

>pdb|2OKV|A Chain A, C-Myc Dna Unwinding Element Binding Protein Length = 209

Iteration: 1
 Score =  117 bits (294), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 57/120 (47%), Positives = 86/120 (71%), Gaps = 4/120 (3%)
Query: 53  GRLVSEIGPGLLVLVGLHEFDTDADADYVCRKVLNMRLFPNENTGKGWDLNVMQKKYGVL 112
           G  +S IG G+ VL+G+   DT  + +++ RK+LN+R+F +E +GK W  +VM K+Y +L
Sbjct: 17  GEQISAIGRGICVLLGISLEDTQKELEHMVRKILNLRVFEDE-SGKHWSKSVMDKQYEIL 75
Query: 113 LVSQFTLYGILKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNPDAIK-GK--CAFQLHL 169
            VSQFTL  +LKGNKPDFH+AMP ++A+ FY+S +++ RK+Y P+ IK GK     Q+H+
Sbjct: 76  CVSQFTLQCVLKGNKPDFHLAMPTEQAEGFYNSFLEQLRKTYRPELIKDGKFGAYMQVHI 135

>pdb|3KNF|A Chain A, Crystal Structure Of D-Tyr-Trna(Tyr) Deacylase From Plasmodium Falciparum Length = 164

Iteration: 1
 Score =  110 bits (275), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 55/108 (50%), Positives = 75/108 (69%), Gaps = 3/108 (2%)
Query: 54  RLVSEIGPGLLVLVGLHEFDTDADADYVCRKVLNMRLFPNENTGKGWDLNVMQKKYGVLL 113
            ++SEI  GL+  +G+H+ DT  DA Y+ RK LN+RL+ N+N  K WD NV    Y +L+
Sbjct: 28  EIISEIKNGLICFLGIHKNDTWEDALYIIRKCLNLRLWNNDN--KTWDKNVKDLNYELLI 85
Query: 114 VSQFTLYG-ILKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNPDAIK 160
           VSQFTL+G   KGNKPDFH+A  P +A  FY+ ++D+F+K YN D IK
Sbjct: 86  VSQFTLFGNTKKGNKPDFHLAKEPNEALIFYNKIIDEFKKQYNDDKIK 133

>pdb|2DBO|A Chain A, Crystal Structure Of D-Tyr-Trna(Tyr) Deacylase From Aquifex Aeolicus Length = 148

Iteration: 1
 Score = 77.0 bits (188), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 41/102 (40%), Positives = 65/102 (63%), Gaps = 3/102 (2%)
Query: 53  GRLVSEIGPGLLVLVGLHEFDTDADADYVCRKVLNMRLFPNENTGKGWDLNVMQKKYGVL 112
           G++V  I  GL V +G+ + DT+ D + +  K+LN+R+F +E  GK +  +V+  K  +L
Sbjct: 17  GKVVGSINEGLNVFLGVRKGDTEEDIEKLVNKILNLRIFEDER-GK-FQYSVLDIKGEIL 74
Query: 113 LVSQFTLYG-ILKGNKPDFHVAMPPQKAKPFYDSLVDKFRKS 153
           +VSQFTLY  + KG +P F  A  P++AK  Y+  VDK ++S
Sbjct: 75  VVSQFTLYANVKKGRRPSFEEAEEPKRAKELYEKFVDKIKES 116

>pdb|1JKE|A Chain A, D-Tyr Trnatyr Deacylase From Escherichia Coli Length = 145

Iteration: 1
 Score = 72.8 bits (177), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 40/101 (39%), Positives = 59/101 (58%), Gaps = 3/101 (2%)
Query: 53  GRLVSEIGPGLLVLVGLHEFDTDADADYVCRKVLNMRLFPNENTGKGWDLNVMQKKYGVL 112
           G +  EIG GLLVL+G+ + D +  A+ +C +VL  R+F +   GK  +LNV Q    VL
Sbjct: 17  GEVTGEIGAGLLVLLGVEKDDDEQKANRLCERVLGYRIFSDAE-GK-MNLNVQQAGGSVL 74
Query: 113 LVSQFTLYG-ILKGNKPDFHVAMPPQKAKPFYDSLVDKFRK 152
           +VSQFTL     +G +P F     P +A+  YD  V++ R+
Sbjct: 75  VVSQFTLAADTERGMRPSFSKGASPDRAEALYDYFVERCRQ 115

>pdb|1J7G|A Chain A, Structure Of Yihz From Haemophilus Influenzae (Hi0670), A D-Tyr- Trna(Tyr) Deacylase Length = 144

Iteration: 1
 Score = 67.0 bits (162), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 39/98 (39%), Positives = 54/98 (55%), Gaps = 3/98 (3%)
Query: 53  GRLVSEIGPGLLVLVGLHEFDTDADADYVCRKVLNMRLFPNENTGKGWDLNVMQKKYGVL 112
           G  + +IG GLLVL+G+ + D    AD +  KVLN R+F +EN     +LNV Q +  +L
Sbjct: 17  GETIGKIGKGLLVLLGVEKEDNREKADKLAEKVLNYRIFSDEN--DKMNLNVQQAQGELL 74
Query: 113 LVSQFTLYG-ILKGNKPDFHVAMPPQKAKPFYDSLVDK 149
           +VSQFTL     KG +P F     P  A   Y+  + K
Sbjct: 75  IVSQFTLAADTQKGLRPSFSKGASPALANELYEYFIQK 112

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	206
2okv_A	209	Probable D-tyrosyl-tRNA(Tyr) deacylase 1; DNA repl	2e-68
2dbo_A	148	D-tyrosyl-tRNA(Tyr) deacylase; D-amino acid, D-tyr	9e-62
3ko5_A	164	D-tyrosyl-tRNA(Tyr) deacylase; DTD, ADP, hydrolase	2e-60
1jke_A	145	O145, D-Tyr-trnaTyr deacylase, ORF_O145; beta-alph	1e-59
1j7g_A	144	D-tyrosyl-tRNA(Tyr) deacylase; D-Tyr-tRNA(Tyr) dea	7e-59
1tc5_A	194	Probable eukaryotic D-amino acid tRNA deacylase, L	3e-49

>2okv_A Probable D-tyrosyl-tRNA(Tyr) deacylase 1; DNA replication, DUE, ATPase, tRNA deacylase, hydrolase; 2.00A {Homo sapiens} Length = 209

 Score =  207 bits (528), Expect = 2e-68
 Identities = 64/124 (51%), Positives = 92/124 (74%), Gaps = 1/124 (0%)

Query: 37  MRAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDADADYVCRKVLNMRLFPNENT 96
           M+AVVQRV  ASV V G  +S IG G+ VL+G+   DT  + +++ RK+LN+R+F +E+ 
Sbjct: 1   MKAVVQRVTRASVTVGGEQISAIGRGICVLLGISLEDTQKELEHMVRKILNLRVFEDES- 59

Query: 97  GKGWDLNVMQKKYGVLLVSQFTLYGILKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNP 156
           GK W  +VM K+Y +L VSQFTL  +LKGNKPDFH+AMP ++A+ FY+S +++ RK+Y P
Sbjct: 60  GKHWSKSVMDKQYEILCVSQFTLQCVLKGNKPDFHLAMPTEQAEGFYNSFLEQLRKTYRP 119

Query: 157 DAIK 160
           + IK
Sbjct: 120 ELIK 123

>2dbo_A D-tyrosyl-tRNA(Tyr) deacylase; D-amino acid, D-tyrosine, structural genomi NPPSFA, national project on protein structural and function analyses; 2.76A {Aquifex aeolicus} Length = 148

 Score =  188 bits (479), Expect = 9e-62
 Identities = 51/121 (42%), Positives = 78/121 (64%), Gaps = 3/121 (2%)

Query: 37  MRAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDADADYVCRKVLNMRLFPNENT 96
           MRAV+QRV  + VEV+G++V  I  GL V +G+ + DT+ D + +  K+LN+R+F +E  
Sbjct: 1   MRAVIQRVKKSWVEVDGKVVGSINEGLNVFLGVRKGDTEEDIEKLVNKILNLRIFEDER- 59

Query: 97  GKGWDLNVMQKKYGVLLVSQFTLYG-ILKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYN 155
           GK +  +V+  K  +L+VSQFTLY  + KG +P F  A  P++AK  Y+  VDK ++S  
Sbjct: 60  GK-FQYSVLDIKGEILVVSQFTLYANVKKGRRPSFEEAEEPKRAKELYEKFVDKIKESGL 118

Query: 156 P 156
            
Sbjct: 119 K 119

>3ko5_A D-tyrosyl-tRNA(Tyr) deacylase; DTD, ADP, hydrolase; HET: ADP; 2.09A {Plasmodium falciparum} PDB: 3knp_A 3knf_A* 3ko3_A* 3ko4_A* 3ko7_A* 3ko9_A* 3kob_A* 3koc_A* 3kod_A 3lmt_A 3lmu_A 3lmv_A* Length = 164

 Score =  185 bits (472), Expect = 2e-60
 Identities = 63/135 (46%), Positives = 85/135 (62%), Gaps = 13/135 (9%)

Query: 37  MRAVVQRVASASVEV----------EGRLVSEIGPGLLVLVGLHEFDTDADADYVCRKVL 86
           MR V+QRV  A + V          E  ++SEI  GL+  +G+H+ DT  DA Y+ RK L
Sbjct: 1   MRVVIQRVKGAILSVRKENIGENEKELEIISEIKNGLICFLGIHKNDTWEDALYIIRKCL 60

Query: 87  NMRLFPNENTGKGWDLNVMQKKYGVLLVSQFTLYG-ILKGNKPDFHVAMPPQKAKPFYDS 145
           N+RL+ N+N    WD NV    Y +L+VSQFTL+G   KGNKPDFH+A  P +A  FY+ 
Sbjct: 61  NLRLWNNDN-KT-WDKNVKDLNYELLIVSQFTLFGNTKKGNKPDFHLAKEPNEALIFYNK 118

Query: 146 LVDKFRKSYNPDAIK 160
           ++D+F+K YN D IK
Sbjct: 119 IIDEFKKQYNDDKIK 133

>1jke_A O145, D-Tyr-trnaTyr deacylase, ORF_O145; beta-alpha-barrel, hydrolase; 1.55A {Escherichia coli} SCOP: c.110.1.1 Length = 145

 Score =  182 bits (464), Expect = 1e-59
 Identities = 50/121 (41%), Positives = 71/121 (58%), Gaps = 3/121 (2%)

Query: 37  MRAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDADADYVCRKVLNMRLFPNENT 96
           M A++QRV  ASV VEG +  EIG GLLVL+G+ + D +  A+ +C +VL  R+F +   
Sbjct: 1   MIALIQRVTRASVTVEGEVTGEIGAGLLVLLGVEKDDDEQKANRLCERVLGYRIFSDAE- 59

Query: 97  GKGWDLNVMQKKYGVLLVSQFTLYGIL-KGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYN 155
           GK  +LNV Q    VL+VSQFTL     +G +P F     P +A+  YD  V++ R+   
Sbjct: 60  GK-MNLNVQQAGGSVLVVSQFTLAADTERGMRPSFSKGASPDRAEALYDYFVERCRQQEM 118

Query: 156 P 156
            
Sbjct: 119 N 119

>1j7g_A D-tyrosyl-tRNA(Tyr) deacylase; D-Tyr-tRNA(Tyr) deacylase, structural genomics, hypothetical structure 2 function project, S2F; 1.64A {Haemophilus influenzae rd KW20} SCOP: c.110.1.1 Length = 144

 Score =  180 bits (460), Expect = 7e-59
 Identities = 48/120 (40%), Positives = 69/120 (57%), Gaps = 3/120 (2%)

Query: 37  MRAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDADADYVCRKVLNMRLFPNENT 96
           M A++QRV+ A V+V+G  + +IG GLLVL+G+ + D    AD +  KVLN R+F +EN 
Sbjct: 1   MIALIQRVSQAKVDVKGETIGKIGKGLLVLLGVEKEDNREKADKLAEKVLNYRIFSDEN- 59

Query: 97  GKGWDLNVMQKKYGVLLVSQFTLYG-ILKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYN 155
            K  +LNV Q +  +L+VSQFTL     KG +P F     P  A   Y+  + K  +   
Sbjct: 60  DK-MNLNVQQAQGELLIVSQFTLAADTQKGLRPSFSKGASPALANELYEYFIQKCAEKLP 118

>1tc5_A Probable eukaryotic D-amino acid tRNA deacylase, LMAJ005534AAA; SGPP, structural genomics, PSI; 1.93A {Leishmania major} SCOP: c.110.1.1 Length = 194

 Score =  158 bits (400), Expect = 3e-49
 Identities = 24/133 (18%), Positives = 49/133 (36%), Gaps = 9/133 (6%)

Query: 37  MRAVVQRVASASVEV-EGRLVSEIGPGLLVLVGL-----HEFDTDADADYVCRKVLNMRL 90
           +R ++Q +    + V         G G++V +           TD    +    +L+ ++
Sbjct: 11  IRVMLQAMDQGHLLVNNVDKYVRAGRGVMVYIAFLSDRDSAPITDEALRHAVGVLLHTKI 70

Query: 91  FPNENTGKGWDLNVMQKK---YGVLLVSQFTLYGILKGNKPDFHVAMPPQKAKPFYDSLV 147
           F + +  K  +     ++     +L+V Q +L G +KG    FH  +        YD   
Sbjct: 71  FTHFSPEKMINQPQSLEECPEMDILIVPQASLGGKVKGRSVQFHQLVAKDVGAALYDRFC 130

Query: 148 DKFRKSYNPDAIK 160
              R +   D  +
Sbjct: 131 HFVRVARGVDESR 143

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	206
1jke_A	145	O145, D-Tyr-trnaTyr deacylase, ORF_O145; beta-alph	100.0
2dbo_A	148	D-tyrosyl-tRNA(Tyr) deacylase; D-amino acid, D-tyr	100.0
1j7g_A	144	D-tyrosyl-tRNA(Tyr) deacylase; D-Tyr-tRNA(Tyr) dea	100.0
3ko5_A	164	D-tyrosyl-tRNA(Tyr) deacylase; DTD, ADP, hydrolase	100.0
2okv_A	209	Probable D-tyrosyl-tRNA(Tyr) deacylase 1; DNA repl	100.0
1tc5_A	194	Probable eukaryotic D-amino acid tRNA deacylase, L	100.0

>1jke_A O145, D-Tyr-trnaTyr deacylase, ORF_O145; beta-alpha-barrel, hydrolase; 1.55A {Escherichia coli} SCOP: c.110.1.1

Probab=100.00  E-value=7.6e-60  Score=385.09  Aligned_cols=134  Identities=40%  Similarity=0.612  Sum_probs=129.4

Q ss_pred             ceEEEEeeceeEEEECCEEEEEECCeeEEEEEeecCCCHHHHHHHHHHHhccccccCCCCCCcccccccccCCcEEEecc
Q 028617           37 MRAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDADADYVCRKVLNMRLFPNENTGKGWDLNVMQKKYGVLLVSQ  116 (206)
Q Consensus        37 MR~VIQRV~~AsV~Vdg~~vg~Ig~GLlvLVGi~~~Dteed~~~ma~KIlnLRIFeDe~gGKkmn~SV~Dv~GeILvVSQ  116 (206)
                      ||+|||||++|||+|||+++++||+|+|+||||+++||+++++|||+||+|||||+||+ || ||+||+|++||||+|||
T Consensus         1 MraviQRV~~AsV~Vdg~~vg~I~~GllvlvGv~~~Dt~~~~~~l~~Ki~~lRif~de~-gk-mn~Sv~d~~g~iL~VSQ   78 (145)
T 1jke_A            1 MIALIQRVTRASVTVEGEVTGEIGAGLLVLLGVEKDDDEQKANRLCERVLGYRIFSDAE-GK-MNLNVQQAGGSVLVVSQ   78 (145)
T ss_dssp             CEEEEEEEEEEEEEETTEEEEEESSEEEEEEECBTTCCHHHHHHHHHHHHHCCCEECTT-SC-EEECTTTTTCEEEEEEC
T ss_pred             CEEEEEEECeEEEEECCEEEEEeCCeEEEEEEEeCCCCHHHHHHHHHHHhhEEeccCCC-CC-ccCCHHHcCCCEEEEEc
Confidence            99999999999999999999999999999999999999999999999999999999999 76 99999999999999999


Q ss_pred             ccccccC-cCCCCCCCCCCCCCchHHHHHHHHHHHHhhCCCCccccccc---eeEEEEeccc
Q 028617          117 FTLYGIL-KGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNPDAIKGKCA---FQLHLVLRSF  174 (206)
Q Consensus       117 FTL~a~~-KGnRPsF~~Aa~pe~A~~LY~~Fv~~lr~~~~~~~V~~G~F---~qv~lv~~~~  174 (206)
                      |||||++ ||||||||.||+||+|++||++|+++|++.+  .+|++|+|   |+|+|+||+-
T Consensus        79 FTL~ad~~KG~RPsF~~Aa~p~~A~~LY~~f~~~l~~~~--~~V~tG~FGA~M~V~l~NDGP  138 (145)
T 1jke_A           79 FTLAADTERGMRPSFSKGASPDRAEALYDYFVERCRQQE--MNTQTGRFAADMQVSLVNDGP  138 (145)
T ss_dssp             GGGGSBCSSSSSCBCSSBCCHHHHHHHHHHHHHHHHHTT--CCEEECCTTSCEEEEEEEEEE
T ss_pred             cccccccCCCCCCCccccCCHHHHHHHHHHHHHHHHhcC--CcceeCccCCCcEEEEEeCCC
Confidence            9999996 9999999999999999999999999999875  47999999   9999999973

>2dbo_A D-tyrosyl-tRNA(Tyr) deacylase; D-amino acid, D-tyrosine, structural genomi NPPSFA, national project on protein structural and function analyses; 2.76A {Aquifex aeolicus}

Probab=100.00  E-value=1.4e-59  Score=384.59  Aligned_cols=140  Identities=37%  Similarity=0.617  Sum_probs=131.6

Q ss_pred             ceEEEEeeceeEEEECCEEEEEECCeeEEEEEeecCCCHHHHHHHHHHHhccccccCCCCCCcccccccccCCcEEEecc
Q 028617           37 MRAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDADADYVCRKVLNMRLFPNENTGKGWDLNVMQKKYGVLLVSQ  116 (206)
Q Consensus        37 MR~VIQRV~~AsV~Vdg~~vg~Ig~GLlvLVGi~~~Dteed~~~ma~KIlnLRIFeDe~gGKkmn~SV~Dv~GeILvVSQ  116 (206)
                      ||+|||||++|||+|||+++++||+|+|+||||+++||+++++|||+||+|||||+||+ || ||+||+|++||||+|||
T Consensus         1 MraviQRV~~AsV~Vdg~~vg~I~~GllvlvGv~~~Dt~~~~~~l~~Kil~lRif~De~-gk-mn~Sv~d~~g~iL~VSQ   78 (148)
T 2dbo_A            1 MRAVIQRVKKSWVEVDGKVVGSINEGLNVFLGVRKGDTEEDIEKLVNKILNLRIFEDER-GK-FQYSVLDIKGEILVVSQ   78 (148)
T ss_dssp             CEEEEEEEEEEEEEETTEEEEEESSEEEEEEECBTTCCHHHHHHHHHHHHHCCCBCCSS-CS-SCBCTTTTTCEEEEEEC
T ss_pred             CEEEEEEECeEEEEECCEEEEEeCCeEEEEEEEeCCCCHHHHHHHHHHHhcEEeccCCC-CC-cccCHHHcCCCEEEEEe
Confidence            99999999999999999999999999999999999999999999999999999999999 76 99999999999999999


Q ss_pred             ccccccC-cCCCCCCCCCCCCCchHHHHHHHHHHHHhhCCCCccccccc---eeEEEEeccc-ceeeeh
Q 028617          117 FTLYGIL-KGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNPDAIKGKCA---FQLHLVLRSF-SFLYKS  180 (206)
Q Consensus       117 FTL~a~~-KGnRPsF~~Aa~pe~A~~LY~~Fv~~lr~~~~~~~V~~G~F---~qv~lv~~~~-~~~~~~  180 (206)
                      |||||++ ||||||||.||+||+|++||++|+++|++.+  .+|++|+|   |+|+|+||+- .++..|
T Consensus        79 FTL~ad~~KG~RPsF~~Aa~p~~A~~LY~~f~~~l~~~g--~~V~tG~FGA~M~V~l~NDGPVTi~lds  145 (148)
T 2dbo_A           79 FTLYANVKKGRRPSFEEAEEPKRAKELYEKFVDKIKESG--LKVETGIFGAMMDVFIENWGPVTIIIDS  145 (148)
T ss_dssp             GGGGCBCSSSSSCBCTTBCCHHHHHHHHHHHHHHHHTTC--SCEEECCSSSCCEEEEEEEEEEEEEEEG
T ss_pred             eecccccCCCCCCCccccCCHHHHHHHHHHHHHHHHhcC--CcceECccCCCcEEEEEECCCEEEEEEC
Confidence            9999995 9999999999999999999999999999874  58999999   9999999984 333444

>1j7g_A D-tyrosyl-tRNA(Tyr) deacylase; D-Tyr-tRNA(Tyr) deacylase, structural genomics, hypothetical structure 2 function project, S2F; 1.64A {Haemophilus influenzae rd KW20} SCOP: c.110.1.1

Probab=100.00  E-value=1.1e-59  Score=383.84  Aligned_cols=133  Identities=38%  Similarity=0.553  Sum_probs=128.6

Q ss_pred             ceEEEEeeceeEEEECCEEEEEECCeeEEEEEeecCCCHHHHHHHHHHHhccccccCCCCCCcccccccccCCcEEEecc
Q 028617           37 MRAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDADADYVCRKVLNMRLFPNENTGKGWDLNVMQKKYGVLLVSQ  116 (206)
Q Consensus        37 MR~VIQRV~~AsV~Vdg~~vg~Ig~GLlvLVGi~~~Dteed~~~ma~KIlnLRIFeDe~gGKkmn~SV~Dv~GeILvVSQ  116 (206)
                      ||+|||||++|||+|||+++++||+|+|+||||+++||+++++|||+||+|||||+||+ || ||+||+|++||||+|||
T Consensus         1 MraviQRV~~AsV~Vdg~~vg~I~~GllvlvGv~~~Dt~~~~~~l~~Kil~lRif~de~-gk-mn~Sv~d~~g~iL~VSQ   78 (144)
T 1j7g_A            1 MIALIQRVSQAKVDVKGETIGKIGKGLLVLLGVEKEDNREKADKLAEKVLNYRIFSDEN-DK-MNLNVQQAQGELLIVSQ   78 (144)
T ss_dssp             CEEEEEEEEEEEEEETTEEEEEESSEEEEEEECBTTCCHHHHHHHHHHHHHCCCEECTT-SC-EEECTTTTTCEEEEEEC
T ss_pred             CEEEEEEECeEEEEECCEEEEEECCeEEEEEEEeCCCCHHHHHHHHHHHhhEEeccCcC-CC-ccCCHHHcCCCEEEEEc
Confidence            99999999999999999999999999999999999999999999999999999999999 76 99999999999999999


Q ss_pred             ccccccC-cCCCCCCCCCCCCCchHHHHHHHHHHHHhhCCCCccccccc---eeEEEEeccc
Q 028617          117 FTLYGIL-KGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNPDAIKGKCA---FQLHLVLRSF  174 (206)
Q Consensus       117 FTL~a~~-KGnRPsF~~Aa~pe~A~~LY~~Fv~~lr~~~~~~~V~~G~F---~qv~lv~~~~  174 (206)
                      |||||++ ||||||||.||+||+|++||++|+++|++.   .+|++|+|   |+++|+||+-
T Consensus        79 FTL~ad~~KG~RPsF~~Aa~p~~A~~LY~~f~~~l~~~---~~V~tG~FGA~M~V~l~NDGP  137 (144)
T 1j7g_A           79 FTLAADTQKGLRPSFSKGASPALANELYEYFIQKCAEK---LPVSTGQFAADMQVSLTNDGP  137 (144)
T ss_dssp             GGGGCBCSSTTSCBCTTBCCHHHHHHHHHHHHHHHHTT---SCEEECCTTSCCEEEEEEEEE
T ss_pred             cccccccCCCCCCCccccCCHHHHHHHHHHHHHHHhcC---CCeeeCccCCCeEEEEEECCC
Confidence            9999996 999999999999999999999999999976   57999999   9999999973

>3ko5_A D-tyrosyl-tRNA(Tyr) deacylase; DTD, ADP, hydrolase; HET: ADP; 2.09A {Plasmodium falciparum} PDB: 3knp_A 3knf_A* 3ko3_A* 3ko4_A* 3ko7_A* 3ko9_A* 3kob_A* 3koc_A* 3kod_A 3lmt_A 3lmu_A 3lmv_A*

Probab=100.00  E-value=1.5e-58  Score=383.80  Aligned_cols=136  Identities=46%  Similarity=0.753  Sum_probs=129.4

Q ss_pred             ceEEEEeeceeEEEE----CC------EEEEEECCeeEEEEEeecCCCHHHHHHHHHHHhccccccCCCCCCcccccccc
Q 028617           37 MRAVVQRVASASVEV----EG------RLVSEIGPGLLVLVGLHEFDTDADADYVCRKVLNMRLFPNENTGKGWDLNVMQ  106 (206)
Q Consensus        37 MR~VIQRV~~AsV~V----dg------~~vg~Ig~GLlvLVGi~~~Dteed~~~ma~KIlnLRIFeDe~gGKkmn~SV~D  106 (206)
                      ||+|||||++|+|+|    ||      +++++||+|+|+||||+++||+++++|||+||+|||||+||+ | +||+||+|
T Consensus         1 MraviQRV~~AsV~V~~~~dg~s~~~~~~vg~Ig~GllvlvGv~~~Dt~~~~~~l~~Kil~lRiF~de~-g-kmn~Sv~d   78 (164)
T 3ko5_A            1 MRVVIQRVKGAILSVRKENIGENEKELEIISEIKNGLICFLGIHKNDTWEDALYIIRKCLNLRLWNNDN-K-TWDKNVKD   78 (164)
T ss_dssp             CEEEEEEEEEEEEEEECC--------EEEEEEESSEEEEEEECBTTCCHHHHHHHHHHHHHCCCEEETT-E-EEEECTTT
T ss_pred             CEEEEEEeCeEEEEEeecCCCCccccceEEEEeCCceEEEEEEcCCCCHHHHHHHHHHHhcEEeecCCC-c-ccccCHHH
Confidence            999999999999999    99      899999999999999999999999999999999999999997 6 59999999


Q ss_pred             cCCcEEEeccccccccC-cCCCCCCCCCCCCCchHHHHHHHHHHHHhhCCCCccccccc---eeEEEEeccc
Q 028617          107 KKYGVLLVSQFTLYGIL-KGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNPDAIKGKCA---FQLHLVLRSF  174 (206)
Q Consensus       107 v~GeILvVSQFTL~a~~-KGnRPsF~~Aa~pe~A~~LY~~Fv~~lr~~~~~~~V~~G~F---~qv~lv~~~~  174 (206)
                      ++||||+||||||||++ ||||||||.||+|++|++||++|+++|++.+.+.+|++|+|   |+|+|+||+-
T Consensus        79 ~~G~iL~VSQFTL~ad~~KG~RPsF~~Aa~p~~A~~LY~~fv~~lr~~~~~~~V~tG~FGA~M~V~l~NDGP  150 (164)
T 3ko5_A           79 LNYELLIVSQFTLFGNTKKGNKPDFHLAKEPNEALIFYNKIIDEFKKQYNDDKIKIGKFGNYMNIDVTNDGP  150 (164)
T ss_dssp             TTCEEEEEECGGGGCBCSSSSSCBCTTBCCHHHHHHHHHHHHHHHHHHSCTTSEEECCTTSCEEEEEEEEEE
T ss_pred             cCCCEEEEEccccccccCCCCCCcccccCCHHHHHHHHHHHHHHHHhhCCCCceEecccCCceEEEEEECCC
Confidence            99999999999999996 99999999999999999999999999999886679999999   9999999985

>2okv_A Probable D-tyrosyl-tRNA(Tyr) deacylase 1; DNA replication, DUE, ATPase, tRNA deacylase, hydrolase; 2.00A {Homo sapiens}

Probab=100.00  E-value=2e-58  Score=394.91  Aligned_cols=144  Identities=47%  Similarity=0.770  Sum_probs=136.1

Q ss_pred             ceEEEEeeceeEEEECCEEEEEECCeeEEEEEeecCCCHHHHHHHHHHHhccccccCCCCCCcccccccccCCcEEEecc
Q 028617           37 MRAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDADADYVCRKVLNMRLFPNENTGKGWDLNVMQKKYGVLLVSQ  116 (206)
Q Consensus        37 MR~VIQRV~~AsV~Vdg~~vg~Ig~GLlvLVGi~~~Dteed~~~ma~KIlnLRIFeDe~gGKkmn~SV~Dv~GeILvVSQ  116 (206)
                      ||+|||||++|+|+|||+++++||+|||+||||+++||+++++|||+||+|||||+||+ ||.||+||+|++|+||+|||
T Consensus         1 MRaViQRV~~AsV~Vdg~vvg~Ig~GllvLvGv~~~Dt~~d~~~la~Kil~LRIF~De~-GK~mn~Sv~Dv~GeiLvVSQ   79 (209)
T 2okv_A            1 MKAVVQRVTRASVTVGGEQISAIGRGICVLLGISLEDTQKELEHMVRKILNLRVFEDES-GKHWSKSVMDKQYEILCVSQ   79 (209)
T ss_dssp             CEEEEEEEEEEEEEETTEEEEEESSEEEEEEECBTTCCHHHHHHHHHHHHHCCCBCCTT-CCTTCBCHHHHTCEEEEEEC
T ss_pred             CEEEEEEeCeEEEEECCEEEEEeCCeEEEEEEEeCCCCHHHHHHHHHHHhhEEeccCCC-CCcccCCHHHcCCCEEEEEe
Confidence            99999999999999999999999999999999999999999999999999999999999 76699999999999999999


Q ss_pred             ccccccCcCCCCCCCCCCCCCchHHHHHHHHHHHHhhCCCCccccccc---eeEEEEeccc-ceeeehh
Q 028617          117 FTLYGILKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNPDAIKGKCA---FQLHLVLRSF-SFLYKSR  181 (206)
Q Consensus       117 FTL~a~~KGnRPsF~~Aa~pe~A~~LY~~Fv~~lr~~~~~~~V~~G~F---~qv~lv~~~~-~~~~~~~  181 (206)
                      |||||++||||||||.||+|++|++||++|+++|++.+.+.+|++|+|   |+|+|+||+- .+++.|+
T Consensus        80 FTL~ad~KG~RPsF~~Aa~pe~A~~LYe~Fv~~lr~~~~~~~V~tG~FGA~M~V~LvNDGPVTi~lds~  148 (209)
T 2okv_A           80 FTLQCVLKGNKPDFHLAMPTEQAEGFYNSFLEQLRKTYRPELIKDGKFGAYMQVHIQNDGPVTIELESP  148 (209)
T ss_dssp             GGGSCCCSSSSCCCTTBCCHHHHHHHHHHHHHHHHHHSCGGGEEECCTTSCEEEEEEEEEEEEEEEECC
T ss_pred             eeccccCCCCCCCccccCCHHHHHHHHHHHHHHHHHhCCCCccEeCcccCCcEEEEEeCCCEEEEEECC
Confidence            999999999999999999999999999999999999876567999999   9999999984 4446554

>1tc5_A Probable eukaryotic D-amino acid tRNA deacylase, LMAJ005534AAA; SGPP, structural genomics, PSI; 1.93A {Leishmania major} SCOP: c.110.1.1

Probab=100.00  E-value=2.5e-53  Score=359.92  Aligned_cols=139  Identities=17%  Similarity=0.204  Sum_probs=132.4

Q ss_pred             cccceEEEEeeceeEEEECCEE-EEEECCeeEEEEEeecC-----CCHHHHHHHHHHHhcccccc--CCCCCCccc--cc
Q 028617           34 INAMRAVVQRVASASVEVEGRL-VSEIGPGLLVLVGLHEF-----DTDADADYVCRKVLNMRLFP--NENTGKGWD--LN  103 (206)
Q Consensus        34 ~~~MR~VIQRV~~AsV~Vdg~~-vg~Ig~GLlvLVGi~~~-----Dteed~~~ma~KIlnLRIFe--De~gGKkmn--~S  103 (206)
                      -|+.|+|||||++|+|+|||++ +++||+|+|+||||+++     ||+++++|||+||+|+|||+  ||+ | +||  +|
T Consensus         8 ~~~~r~viQRV~~AsV~Vdg~~~vg~Ig~Gllvlvgi~~~~~~~~Dt~~~~~~l~~Kil~lRIF~~~de~-g-kmn~~~S   85 (194)
T 1tc5_A            8 HMTIRVMLQAMDQGHLLVNNVDKYVRAGRGVMVYIAFLSDRDSAPITDEALRHAVGVLLHTKIFTHFSPE-K-MINQPQS   85 (194)
T ss_dssp             CCEEEEEEEEESEEEEECSSSSCEEEECSEEEEEEEEECCTTCCCCCHHHHHHHHHHHHHSCCBSCSCTT-C-SSCCCBC
T ss_pred             ceeEEEEEEEECeeEEEECCeEEEEEECCeEEEEEEEecCCCCCCCCHHHHHHHHHHhhcEEeccccCcc-c-CcccCCC
Confidence            4788999999999999999999 99999999999999999     99999999999999999999  998 6 499  99


Q ss_pred             ccccCC-cEEEeccccccccCcCCCCCCCCCCCCCchHHHHHHHHHHHHhhCC---------------------------
Q 028617          104 VMQKKY-GVLLVSQFTLYGILKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYN---------------------------  155 (206)
Q Consensus       104 V~Dv~G-eILvVSQFTL~a~~KGnRPsF~~Aa~pe~A~~LY~~Fv~~lr~~~~---------------------------  155 (206)
                      |+|++| |||+||||||||++||||||||.||+||+|++||++||+.|++.++                           
T Consensus        86 v~D~~g~eiLvVSQFTL~g~~KGrrPsF~~Aa~pe~A~~LY~~Fv~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (194)
T 1tc5_A           86 LEECPEMDILIVPQASLGGKVKGRSVQFHQLVAKDVGAALYDRFCHFVRVARGVDESRVDANGAPRSEGDAPKAEGWIKY  165 (194)
T ss_dssp             STTCTTCEEEEEECGGGGCEEETTEEECTTBCCHHHHHHHHHHHHHHHHHHTTCCTTSBCTTSSBSSGGGSCCSSSCCCC
T ss_pred             hhhcCCCeEEEEEccccccccCCCCCCcccCCCHHHHHHHHHHHHHHHHHhhCccccccccccccccccccccccccccc
Confidence            999999 9999999999999999999999999999999999999999998863                           


Q ss_pred             CCccccccc---eeEEEEeccc
Q 028617          156 PDAIKGKCA---FQLHLVLRSF  174 (206)
Q Consensus       156 ~~~V~~G~F---~qv~lv~~~~  174 (206)
                      +.+|++|+|   |+++|+||+-
T Consensus       166 ~~~V~tG~FGa~M~V~l~NDGP  187 (194)
T 1tc5_A          166 NSRVISGTFGNRQGLRFESEGP  187 (194)
T ss_dssp             CSCEEECCTTSCCCEEEEESCC
T ss_pred             CCceeECcccCCeEEEEEeCCC
Confidence            568999999   9999999973

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	206
d1tc5a_	187	c.110.1.1 (A:) probable eukaryotic D-amino acid tR	1e-46
d1jkea_	145	c.110.1.1 (A:) D-Tyr tRNAtyr deacylase, DTD {Esche	1e-42
d1j7ga_	144	c.110.1.1 (A:) D-Tyr tRNAtyr deacylase, DTD {Haemo	3e-40

>d1tc5a_ c.110.1.1 (A:) probable eukaryotic D-amino acid tRNA deacylase {Leishmania major [TaxId: 5664]} Length = 187

class: Alpha and beta proteins (a/b)
fold: DTD-like
superfamily: DTD-like
family: DTD-like
domain: probable eukaryotic D-amino acid tRNA deacylase
species: Leishmania major [TaxId: 5664]

 Score =  149 bits (378), Expect = 1e-46
 Identities = 24/133 (18%), Positives = 48/133 (36%), Gaps = 9/133 (6%)

Query: 36  AMRAVVQRVASASVEV-EGRLVSEIGPGLLVLVGLHE-----FDTDADADYVCRKVLNMR 89
            +R ++Q +    + V         G G++V +           TD    +    +L+ +
Sbjct: 3   TIRVMLQAMDQGHLLVNNVDKYVRAGRGVMVYIAFLSDRDSAPITDEALRHAVGVLLHTK 62

Query: 90  LFPNENTGKGWDLNVMQKK---YGVLLVSQFTLYGILKGNKPDFHVAMPPQKAKPFYDSL 146
           +F + +  K  +     ++     +L+V Q +L G +KG    FH  +        YD  
Sbjct: 63  IFTHFSPEKMINQPQSLEECPEMDILIVPQASLGGKVKGRSVQFHQLVAKDVGAALYDRF 122

Query: 147 VDKFRKSYNPDAI 159
               R +   D  
Sbjct: 123 CHFVRVARGVDES 135

>d1jkea_ c.110.1.1 (A:) D-Tyr tRNAtyr deacylase, DTD {Escherichia coli [TaxId: 562]} Length = 145

class: Alpha and beta proteins (a/b)
fold: DTD-like
superfamily: DTD-like
family: DTD-like
domain: D-Tyr tRNAtyr deacylase, DTD
species: Escherichia coli [TaxId: 562]

 Score =  138 bits (349), Expect = 1e-42
 Identities = 50/121 (41%), Positives = 71/121 (58%), Gaps = 3/121 (2%)

Query: 37  MRAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDADADYVCRKVLNMRLFPNENT 96
           M A++QRV  ASV VEG +  EIG GLLVL+G+ + D +  A+ +C +VL  R+F +   
Sbjct: 1   MIALIQRVTRASVTVEGEVTGEIGAGLLVLLGVEKDDDEQKANRLCERVLGYRIFSDAE- 59

Query: 97  GKGWDLNVMQKKYGVLLVSQFTLYG-ILKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYN 155
           GK  +LNV Q    VL+VSQFTL     +G +P F     P +A+  YD  V++ R+   
Sbjct: 60  GK-MNLNVQQAGGSVLVVSQFTLAADTERGMRPSFSKGASPDRAEALYDYFVERCRQQEM 118

Query: 156 P 156
            
Sbjct: 119 N 119

>d1j7ga_ c.110.1.1 (A:) D-Tyr tRNAtyr deacylase, DTD {Haemophilus influenzae [TaxId: 727]} Length = 144

class: Alpha and beta proteins (a/b)
fold: DTD-like
superfamily: DTD-like
family: DTD-like
domain: D-Tyr tRNAtyr deacylase, DTD
species: Haemophilus influenzae [TaxId: 727]

 Score =  132 bits (333), Expect = 3e-40
 Identities = 47/120 (39%), Positives = 68/120 (56%), Gaps = 3/120 (2%)

Query: 37  MRAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDADADYVCRKVLNMRLFPNENT 96
           M A++QRV+ A V+V+G  + +IG GLLVL+G+ + D    AD +  KVLN R+F +EN 
Sbjct: 1   MIALIQRVSQAKVDVKGETIGKIGKGLLVLLGVEKEDNREKADKLAEKVLNYRIFSDEN- 59

Query: 97  GKGWDLNVMQKKYGVLLVSQFTLYG-ILKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYN 155
               +LNV Q +  +L+VSQFTL     KG +P F     P  A   Y+  + K  +   
Sbjct: 60  -DKMNLNVQQAQGELLIVSQFTLAADTQKGLRPSFSKGASPALANELYEYFIQKCAEKLP 118

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	206
d1jkea_	145	D-Tyr tRNAtyr deacylase, DTD {Escherichia coli [Ta	100.0
d1j7ga_	144	D-Tyr tRNAtyr deacylase, DTD {Haemophilus influenz	100.0
d1tc5a_	187	probable eukaryotic D-amino acid tRNA deacylase {L	100.0

>d1jkea_ c.110.1.1 (A:) D-Tyr tRNAtyr deacylase, DTD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: DTD-like
superfamily: DTD-like
family: DTD-like
domain: D-Tyr tRNAtyr deacylase, DTD
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2.2e-58  Score=374.31  Aligned_cols=134  Identities=40%  Similarity=0.608  Sum_probs=128.5

Q ss_pred             ceEEEEeeceeEEEECCEEEEEECCeeEEEEEeecCCCHHHHHHHHHHHhccccccCCCCCCcccccccccCCcEEEecc
Q 028617           37 MRAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDADADYVCRKVLNMRLFPNENTGKGWDLNVMQKKYGVLLVSQ  116 (206)
Q Consensus        37 MR~VIQRV~~AsV~Vdg~~vg~Ig~GLlvLVGi~~~Dteed~~~ma~KIlnLRIFeDe~gGKkmn~SV~Dv~GeILvVSQ  116 (206)
                      ||+|||||++|+|+|||+++++||+|+|+||||+++||+++++|||+||+|||||+|++ || ||+||+|++||||+|||
T Consensus         1 Mr~viQRV~~AsV~V~~~~v~~I~~Gll~lvgi~~~D~~~~~~~~~~Kil~lRiF~d~~-gk-~~~Sv~d~~geiLiVSQ   78 (145)
T d1jkea_           1 MIALIQRVTRASVTVEGEVTGEIGAGLLVLLGVEKDDDEQKANRLCERVLGYRIFSDAE-GK-MNLNVQQAGGSVLVVSQ   78 (145)
T ss_dssp             CEEEEEEEEEEEEEETTEEEEEESSEEEEEEECBTTCCHHHHHHHHHHHHHCCCEECTT-SC-EEECTTTTTCEEEEEEC
T ss_pred             CEEEEEEeCeEEEEECCEEEEEeCCceEEEEEEecCCChHHHHHHHHHHhheeeccccc-CC-ccCCHhHcCCcEEEeee
Confidence            99999999999999999999999999999999999999999999999999999999998 65 99999999999999999


Q ss_pred             cccccc-CcCCCCCCCCCCCCCchHHHHHHHHHHHHhhCCCCccccccc---eeEEEEeccc
Q 028617          117 FTLYGI-LKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNPDAIKGKCA---FQLHLVLRSF  174 (206)
Q Consensus       117 FTL~a~-~KGnRPsF~~Aa~pe~A~~LY~~Fv~~lr~~~~~~~V~~G~F---~qv~lv~~~~  174 (206)
                      |||||+ .||||||||.||+||+|++||++|+++|++.+  .+|++|+|   |+|+++||+-
T Consensus        79 FTL~a~~~KG~rPsF~~Aa~p~~A~~ly~~f~~~l~~~~--~~v~~G~FGA~M~V~l~NDGP  138 (145)
T d1jkea_          79 FTLAADTERGMRPSFSKGASPDRAEALYDYFVERCRQQE--MNTQTGRFAADMQVSLVNDGP  138 (145)
T ss_dssp             GGGGSBCSSSSSCBCSSBCCHHHHHHHHHHHHHHHHHTT--CCEEECCTTSCEEEEEEEEEE
T ss_pred             eeeeeeecCCCCceecccCCHHHHHHHHHHHHHHHHhcC--CCceeCCCCCCcEEEEEEcCC
Confidence            999999 69999999999999999999999999999876  47888888   9999999973

>d1j7ga_ c.110.1.1 (A:) D-Tyr tRNAtyr deacylase, DTD {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: DTD-like
superfamily: DTD-like
family: DTD-like
domain: D-Tyr tRNAtyr deacylase, DTD
species: Haemophilus influenzae [TaxId: 727]

Probab=100.00  E-value=7.3e-58  Score=370.90  Aligned_cols=133  Identities=38%  Similarity=0.562  Sum_probs=127.1

Q ss_pred             ceEEEEeeceeEEEECCEEEEEECCeeEEEEEeecCCCHHHHHHHHHHHhccccccCCCCCCcccccccccCCcEEEecc
Q 028617           37 MRAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDADADYVCRKVLNMRLFPNENTGKGWDLNVMQKKYGVLLVSQ  116 (206)
Q Consensus        37 MR~VIQRV~~AsV~Vdg~~vg~Ig~GLlvLVGi~~~Dteed~~~ma~KIlnLRIFeDe~gGKkmn~SV~Dv~GeILvVSQ  116 (206)
                      ||+|||||++|+|+|||+.+++||+|+|+||||+++||+++++|||+||+|||||+|++ || ||+||+|++||||+|||
T Consensus         1 Mr~viQRV~~AsV~V~~~~v~~I~~Gl~vlvgi~~~D~~~~~~~~~~Kil~lRiF~d~~-gk-~~~sv~d~~geiLvVSQ   78 (144)
T d1j7ga_           1 MIALIQRVSQAKVDVKGETIGKIGKGLLVLLGVEKEDNREKADKLAEKVLNYRIFSDEN-DK-MNLNVQQAQGELLIVSQ   78 (144)
T ss_dssp             CEEEEEEEEEEEEEETTEEEEEESSEEEEEEECBTTCCHHHHHHHHHHHHHCCCEECTT-SC-EEECTTTTTCEEEEEEC
T ss_pred             CEEEEEEeCeEEEEECCEEEEEECCCcEEEEEEcCCCChHHHHHHHHHHhheEeeCCCC-cc-cccchhhCCCcEEEeee
Confidence            99999999999999999999999999999999999999999999999999999999999 65 99999999999999999


Q ss_pred             cccccc-CcCCCCCCCCCCCCCchHHHHHHHHHHHHhhCCCCccccccc---eeEEEEeccc
Q 028617          117 FTLYGI-LKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNPDAIKGKCA---FQLHLVLRSF  174 (206)
Q Consensus       117 FTL~a~-~KGnRPsF~~Aa~pe~A~~LY~~Fv~~lr~~~~~~~V~~G~F---~qv~lv~~~~  174 (206)
                      |||||+ .||||||||.||+|++|++||++|++++++.+   +|++|.|   |+++++||+-
T Consensus        79 FTL~a~~~KG~RPsF~~Aa~p~~A~~ly~~fv~~l~~~~---~v~~G~FGa~M~V~l~NdGP  137 (144)
T d1j7ga_          79 FTLAADTQKGLRPSFSKGASPALANELYEYFIQKCAEKL---PVSTGQFAADMQVSLTNDGP  137 (144)
T ss_dssp             GGGGCBCSSTTSCBCTTBCCHHHHHHHHHHHHHHHHTTS---CEEECCTTSCCEEEEEEEEE
T ss_pred             eeeeeeecCCcceeeecccCHHHHHHHHHHHHHHHhcCC---CceeCEeCCCcEEEEEECCC
Confidence            999999 59999999999999999999999999999765   5877777   9999999973

>d1tc5a_ c.110.1.1 (A:) probable eukaryotic D-amino acid tRNA deacylase {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: DTD-like
superfamily: DTD-like
family: DTD-like
domain: probable eukaryotic D-amino acid tRNA deacylase
species: Leishmania major [TaxId: 5664]

Probab=100.00  E-value=9.2e-56  Score=371.28  Aligned_cols=139  Identities=17%  Similarity=0.226  Sum_probs=128.2

Q ss_pred             ccceEEEEeeceeEEEEC-CEEEEEECCeeEEEEEeecCC-----CHHHHHHHHHHHhccccccCCCCCC---ccccccc
Q 028617           35 NAMRAVVQRVASASVEVE-GRLVSEIGPGLLVLVGLHEFD-----TDADADYVCRKVLNMRLFPNENTGK---GWDLNVM  105 (206)
Q Consensus        35 ~~MR~VIQRV~~AsV~Vd-g~~vg~Ig~GLlvLVGi~~~D-----teed~~~ma~KIlnLRIFeDe~gGK---kmn~SV~  105 (206)
                      +.||+|||||++|+|+|| |+++++||+|||+||||+++|     |+++++||++||+|||||+|++ ||   .||.||+
T Consensus         2 m~MR~vIQRV~~AsV~Vd~g~~v~~Ig~GLlvlvGi~k~D~~~~dte~~~~~l~~Kil~lRIF~de~-gk~nl~~~~Sv~   80 (187)
T d1tc5a_           2 MTIRVMLQAMDQGHLLVNNVDKYVRAGRGVMVYIAFLSDRDSAPITDEALRHAVGVLLHTKIFTHFS-PEKMINQPQSLE   80 (187)
T ss_dssp             CEEEEEEEEESEEEEECSSSSCEEEECSEEEEEEEEECCTTCCCCCHHHHHHHHHHHHHSCCBSCSC-TTCSSCCCBCST
T ss_pred             ceEEEEEEEeCeEEEEECCCeEEEEECCceEEEEEEeeCCCcccChHHHHHHHHHHHhheEeecCCC-cccccccccccc
Confidence            679999999999999997 689999999999999997765     6999999999999999999999 66   3677999


Q ss_pred             ccC-CcEEEeccccccccCcCCCCCCCCCCCCCchHHHHHHHHHHHHhhCCCC---------------------------
Q 028617          106 QKK-YGVLLVSQFTLYGILKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNPD---------------------------  157 (206)
Q Consensus       106 Dv~-GeILvVSQFTL~a~~KGnRPsF~~Aa~pe~A~~LY~~Fv~~lr~~~~~~---------------------------  157 (206)
                      |+. ||||+||||||||++||||||||.||+||.|++||++|+++|++.|+++                           
T Consensus        81 Di~G~eiLvVSQFTL~a~~KG~RPsF~~Aa~pe~A~~Ly~~fv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (187)
T d1tc5a_          81 ECPEMDILIVPQASLGGKVKGRSVQFHQLVAKDVGAALYDRFCHFVRVARGVDESRVDANGAPRSEGDAPKAEGWIKYNS  160 (187)
T ss_dssp             TCTTCEEEEEECGGGGCEEETTEEECTTBCCHHHHHHHHHHHHHHHHHHTTCCTTSBCTTSSBSSGGGSCCSSSCCCCCS
T ss_pred             ccCCCeEEEEEeEEEEeecCCCCCChhhcCCHHHHHHHHHHHHHHHHHhccccccccccccccccccccccchhhhccCc
Confidence            995 5999999999999999999999999999999999999999999887643                           


Q ss_pred             ccccccc---eeEEEEeccc
Q 028617          158 AIKGKCA---FQLHLVLRSF  174 (206)
Q Consensus       158 ~V~~G~F---~qv~lv~~~~  174 (206)
                      +|++|+|   |+++|+||+-
T Consensus       161 ~V~~G~FGa~M~V~l~NdGP  180 (187)
T d1tc5a_         161 RVISGTFGNRQGLRFESEGP  180 (187)
T ss_dssp             CEEECCTTSCCCEEEEESCC
T ss_pred             eeeECCCCCCeEEEEEeCCC
Confidence            6999999   9999999973