Citrus Sinensis ID: 028618

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200------
Protein Sequence
MAVESSNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKVR
Secondary Structure (PSIPRED)
cccccccHHHHHHHHHcccccEEccccccccccEEEEEEEcccccccHHHHHHHHHHHHHHHccccccccEEEEcccccHHHHHHHHHHHHccccEEEEccccccHHHHHHHHHHccEEEEcccccccHHHHHHHHHHHHHcccccccccccccccHHHHHHcccHHHHccccccccEEEEccccccccccHHHHHHHHccccEEc
Secondary Structure Prediction (SSPRO)
cccccccHHHHHHHHHccccEEEEEcccccccccEEEEEcccccccEccHHHHHHHHHHHHHccccccccEEEEEEcccHHHHHHHHHHHHHcccEEEEEEccccHHHHHHHHHcccEEEEEcHHHHHHHHHHHHHHHHHcccccEEEccccccHHHHHHHHcHHHHHHHHccccccEEEEEccccHHHHHHHHHHHHHccccEEc
Coil and Loop (DISEMBL)
MAVESSNIAKDVTeligntplvylNNIVNGCVARIAAKLEmmepcssvkdrigysmisdaeakglitpgesvlieptsgntgIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAelvltdpakgmKGAVQKAEEILAKTpnaymlqqfenpanpkihyettgpelwkgsggriDALVsgigtggtitgagkflkeknpnikvr
Flexible Loop (DISEMBL)
mavessniakdVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGgtitgagkflkeknpnikvr
Low Complexity Region (SEG)
MAVESSNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSgigtggtitgagKFLKEKNPNIKVR
Disordered region (IsUnstruct)
**********DVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITGAGKF***********
Disordered Region (DISOPRED)
*****SN**KDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNI*VR
Disordered Region (DISEMBL)
********AKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKVR
Disordered Region (DISPRO)
*****SNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKVR
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAVESSNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKVR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	206	2.2.26 [Sep-21-2011]
Q43317	325	Cysteine synthase OS=Citr	N/A	no	0.995	0.630	0.882	2e-95
O23733	322	Cysteine synthase OS=Bras	N/A	no	0.975	0.624	0.850	5e-91
O81154	325	Cysteine synthase OS=Sola	N/A	no	0.995	0.630	0.834	9e-91
P47998	322	Cysteine synthase OS=Arab	yes	no	0.975	0.624	0.850	2e-90
Q00834	325	Cysteine synthase OS=Spin	N/A	no	0.995	0.630	0.824	6e-90
P38076	325	Cysteine synthase OS=Trit	N/A	no	0.975	0.618	0.820	2e-88
Q9XEA6	321	Cysteine synthase OS=Oryz	yes	no	0.961	0.616	0.823	5e-88
O23735	324	Cysteine synthase OS=Bras	N/A	no	0.961	0.611	0.843	9e-88
Q9XEA8	325	Cysteine synthase OS=Oryz	no	no	0.995	0.630	0.790	9e-87
P31300	374	Cysteine synthase, chloro	N/A	no	0.985	0.542	0.783	1e-86

>sp|Q43317|CYSK_CITLA Cysteine synthase OS=Citrullus lanatus PE=1 SV=1

 Score =  348 bits (892), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 181/205 (88%), Positives = 195/205 (95%)

Query: 1   MAVESSNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDA 60
           MA   S IAKDVTELIGNTPLVYLN +V+GCVAR+AAKLEMMEPCSSVKDRIGYSMISDA
Sbjct: 1   MADAKSTIAKDVTELIGNTPLVYLNRVVDGCVARVAAKLEMMEPCSSVKDRIGYSMISDA 60

Query: 61  EAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV 120
           E KGLITPGESVLIEPTSGNTGIGLAF+AAAK YRLII MPASMSLERR ILRAFGAELV
Sbjct: 61  ENKGLITPGESVLIEPTSGNTGIGLAFIAAAKGYRLIICMPASMSLERRTILRAFGAELV 120

Query: 121 LTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALV 180
           LTDPA+GMKGAVQKAEEI AKTPN+Y+LQQFENPANPKIHYETTGPE+W+GSGG+IDALV
Sbjct: 121 LTDPARGMKGAVQKAEEIKAKTPNSYILQQFENPANPKIHYETTGPEIWRGSGGKIDALV 180

Query: 181 SGIGTGGTITGAGKFLKEKNPNIKV 205
           SGIGTGGT+TGAGK+LKE+NPNIK+
Sbjct: 181 SGIGTGGTVTGAGKYLKEQNPNIKL 205

Produces L-cysteine from O-acetyl-L-serine and hydrogen sulfide. Can also use pyrazole and 3,4-dihydroxypyridine instead of the hydrogen sulfide to produce two plant specific non-protein amino acids beta-pyrazolylalanine and L-mimosine.
Citrullus lanatus (taxid: 3654)
EC: 2EC: .EC: 5EC: .EC: 1EC: .EC: 5EC: 2

>sp|O23733|CYSK1_BRAJU Cysteine synthase OS=Brassica juncea PE=2 SV=1

 Score =  333 bits (854), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 171/201 (85%), Positives = 186/201 (92%)

Query: 5   SSNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKG 64
           +S IAKDVTELIGNTPLVYLNN+  GCV R+AAKLEMMEPCSSVKDRIG+SMISDAE KG
Sbjct: 2   ASRIAKDVTELIGNTPLVYLNNVAEGCVGRVAAKLEMMEPCSSVKDRIGFSMISDAEQKG 61

Query: 65  LITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDP 124
           LI PGESVLIEPTSGNTG+GLAF AAAK Y+LIITMPASMS+ERRIIL AFG ELVLTDP
Sbjct: 62  LIKPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSVERRIILLAFGVELVLTDP 121

Query: 125 AKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIG 184
           AKGMKGA+ KAEEILAKTPN YMLQQFENPANPKIHYETTGPE+WKG+ G+ID  VSGIG
Sbjct: 122 AKGMKGAIAKAEEILAKTPNGYMLQQFENPANPKIHYETTGPEIWKGTDGKIDGFVSGIG 181

Query: 185 TGGTITGAGKFLKEKNPNIKV 205
           TGGTITGAGK+LKE+NPN+K+
Sbjct: 182 TGGTITGAGKYLKEQNPNVKL 202

Brassica juncea (taxid: 3707)

EC: 2

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 4

EC: 7

>sp|O81154|CYSK_SOLTU Cysteine synthase OS=Solanum tuberosum PE=2 SV=1

 Score =  332 bits (852), Expect = 9e-91,   Method: Compositional matrix adjust.
 Identities = 171/205 (83%), Positives = 191/205 (93%)

Query: 1   MAVESSNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDA 60
           MA E   IAKDVTELIGNTPLVYLNN+V+GCVAR+AAKLE MEPCSSVKDRIGYSMI+DA
Sbjct: 1   MAGEKIGIAKDVTELIGNTPLVYLNNVVDGCVARVAAKLESMEPCSSVKDRIGYSMITDA 60

Query: 61  EAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV 120
           E KGLI PGESVLIEPTSGNTG+GLAFMAAAK Y+LIITMP+SMSLERRIILR F +ELV
Sbjct: 61  EEKGLIKPGESVLIEPTSGNTGVGLAFMAAAKGYKLIITMPSSMSLERRIILRGFRSELV 120

Query: 121 LTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALV 180
           LTDPAKGMKGA+ KAEEI AKTPN+Y+LQQFENPANPKIHYETTGPE+WKGS G++DAL 
Sbjct: 121 LTDPAKGMKGAISKAEEIKAKTPNSYILQQFENPANPKIHYETTGPEIWKGSNGKVDALA 180

Query: 181 SGIGTGGTITGAGKFLKEKNPNIKV 205
           SGIGTGGTITG+GK+L+E+NPN+K+
Sbjct: 181 SGIGTGGTITGSGKYLREQNPNVKL 205

Solanum tuberosum (taxid: 4113)

EC: 2

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 4

EC: 7

>sp|P47998|CYSK1_ARATH Cysteine synthase OS=Arabidopsis thaliana GN=OASA1 PE=1 SV=2

 Score =  331 bits (849), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 171/201 (85%), Positives = 185/201 (92%)

Query: 5   SSNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKG 64
           +S IAKDVTELIGNTPLVYLNN+  GCV R+AAKLEMMEPCSSVKDRIG+SMISDAE KG
Sbjct: 2   ASRIAKDVTELIGNTPLVYLNNVAEGCVGRVAAKLEMMEPCSSVKDRIGFSMISDAEKKG 61

Query: 65  LITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDP 124
           LI PGESVLIEPTSGNTG+GLAF AAAK Y+LIITMPASMS ERRIIL AFG ELVLTDP
Sbjct: 62  LIKPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERRIILLAFGVELVLTDP 121

Query: 125 AKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIG 184
           AKGMKGA+ KAEEILAKTPN YMLQQFENPANPKIHYETTGPE+WKG+GG+ID  VSGIG
Sbjct: 122 AKGMKGAIAKAEEILAKTPNGYMLQQFENPANPKIHYETTGPEIWKGTGGKIDGFVSGIG 181

Query: 185 TGGTITGAGKFLKEKNPNIKV 205
           TGGTITGAGK+LKE+N N+K+
Sbjct: 182 TGGTITGAGKYLKEQNANVKL 202

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 4

EC: 7

>sp|Q00834|CYSK_SPIOL Cysteine synthase OS=Spinacia oleracea PE=1 SV=1

 Score =  330 bits (845), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 169/205 (82%), Positives = 189/205 (92%)

Query: 1   MAVESSNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDA 60
           M  E + IAKDVTELIG TPLVYLN + +GCVAR+AAKLE MEPCSSVKDRIG+SMI+DA
Sbjct: 1   MVEEKAFIAKDVTELIGKTPLVYLNTVADGCVARVAAKLEGMEPCSSVKDRIGFSMITDA 60

Query: 61  EAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV 120
           E  GLITPGESVLIEPTSGNTGIGLAF+AAAK Y+LIITMPASMSLERR ILRAFGAEL+
Sbjct: 61  EKSGLITPGESVLIEPTSGNTGIGLAFIAAAKGYKLIITMPASMSLERRTILRAFGAELI 120

Query: 121 LTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALV 180
           LTDPAKGMKGAVQKAEEI  KTPN+Y+LQQFENPANPK+HYETTGPE+WKG+GG+ID  V
Sbjct: 121 LTDPAKGMKGAVQKAEEIRDKTPNSYILQQFENPANPKVHYETTGPEIWKGTGGKIDIFV 180

Query: 181 SGIGTGGTITGAGKFLKEKNPNIKV 205
           SGIGTGGTITGAGK+LKE+NP++K+
Sbjct: 181 SGIGTGGTITGAGKYLKEQNPDVKL 205

Spinacia oleracea (taxid: 3562)

EC: 2

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 4

EC: 7

>sp|P38076|CYSK_WHEAT Cysteine synthase OS=Triticum aestivum GN=CYS1 PE=2 SV=1

 Score =  325 bits (832), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 165/201 (82%), Positives = 185/201 (92%)

Query: 5   SSNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKG 64
           S  IAKDVTELIGNTPLVYLN + +GCV R+AAKLE MEPCSSVKDRIGYSMI+DAE KG
Sbjct: 6   SPAIAKDVTELIGNTPLVYLNKVTDGCVGRVAAKLESMEPCSSVKDRIGYSMITDAEEKG 65

Query: 65  LITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDP 124
            I PG+SVLIEPTSGNTGIGLAFMAAAK YRL++TMPASMS+ERRIIL+AFGAEL+LTDP
Sbjct: 66  FIVPGKSVLIEPTSGNTGIGLAFMAAAKGYRLVLTMPASMSMERRIILKAFGAELILTDP 125

Query: 125 AKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIG 184
             GMKGAVQKAEE+ AKTPN+Y+LQQFEN ANPKIHYETTGPE+WKG+GG+ID LVSGIG
Sbjct: 126 LLGMKGAVQKAEELAAKTPNSYILQQFENAANPKIHYETTGPEIWKGTGGKIDGLVSGIG 185

Query: 185 TGGTITGAGKFLKEKNPNIKV 205
           TGGTITG GK+L+E+NPNIK+
Sbjct: 186 TGGTITGTGKYLQEQNPNIKL 206

Triticum aestivum (taxid: 4565)

EC: 2

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 4

EC: 7

>sp|Q9XEA6|CYSK1_ORYSJ Cysteine synthase OS=Oryza sativa subsp. japonica GN=RCS1 PE=2 SV=2

 Score =  323 bits (828), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 163/198 (82%), Positives = 187/198 (94%)

Query: 8   IAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLIT 67
           IAKDVTELIGNTPLVYLN + +GCV R+AAKLE MEPCSSVKDRIGYSMI+DAE KGLIT
Sbjct: 5   IAKDVTELIGNTPLVYLNRVTDGCVGRVAAKLESMEPCSSVKDRIGYSMITDAEEKGLIT 64

Query: 68  PGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKG 127
           PG+SVLIEPTSGNTGIGLAFMAAAK YRL++TMPASMS+ERRIIL+AFGAEL+LTDP  G
Sbjct: 65  PGKSVLIEPTSGNTGIGLAFMAAAKGYRLVLTMPASMSMERRIILKAFGAELILTDPLLG 124

Query: 128 MKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGG 187
           MKGAVQKAEE+ AKT N+++LQQFENPANPKIHYETTGPE+WKG+GG++D LVSGIGTGG
Sbjct: 125 MKGAVQKAEELAAKTNNSFILQQFENPANPKIHYETTGPEIWKGTGGKVDGLVSGIGTGG 184

Query: 188 TITGAGKFLKEKNPNIKV 205
           TITGAG++L+E+NP+IK+
Sbjct: 185 TITGAGRYLREQNPDIKI 202

Oryza sativa subsp. japonica (taxid: 39947)

EC: 2

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 4

EC: 7

>sp|O23735|CYSK2_BRAJU Cysteine synthase OS=Brassica juncea PE=2 SV=1

 Score =  322 bits (826), Expect = 9e-88,   Method: Compositional matrix adjust.
 Identities = 167/198 (84%), Positives = 183/198 (92%)

Query: 8   IAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLIT 67
           IA DVTELIGNTPLVYLN++  GCV R+AAKLEMMEPCSSVKDRIG+SMISDAE KGLI 
Sbjct: 7   IANDVTELIGNTPLVYLNSVAEGCVGRVAAKLEMMEPCSSVKDRIGFSMISDAEKKGLIK 66

Query: 68  PGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKG 127
           PGESVLIEPTSGNTG+GLAF AAAK Y+LIITMPASMS+ERRIIL AFG ELVLTDPAKG
Sbjct: 67  PGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSIERRIILLAFGVELVLTDPAKG 126

Query: 128 MKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGG 187
           MKGA+ KAEEILAKTPN YMLQQFENPANPKIHYETTGPE+WKG+ G+ID  +SGIGTGG
Sbjct: 127 MKGAIAKAEEILAKTPNGYMLQQFENPANPKIHYETTGPEIWKGTEGKIDGFISGIGTGG 186

Query: 188 TITGAGKFLKEKNPNIKV 205
           TITGAGK+LKE+NPN+K+
Sbjct: 187 TITGAGKYLKEQNPNVKL 204

Brassica juncea (taxid: 3707)

EC: 2

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 4

EC: 7

>sp|Q9XEA8|CYSK2_ORYSJ Cysteine synthase OS=Oryza sativa subsp. japonica GN=RCS3 PE=2 SV=1

 Score =  319 bits (817), Expect = 9e-87,   Method: Compositional matrix adjust.
 Identities = 162/205 (79%), Positives = 186/205 (90%)

Query: 1   MAVESSNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDA 60
           MA    +IA DVT LIGNTPLVYLN +V+GC A+IAAKLE+MEPCSSVKDRIGYSMI+DA
Sbjct: 1   MAESGQSIASDVTALIGNTPLVYLNKVVDGCEAQIAAKLEIMEPCSSVKDRIGYSMITDA 60

Query: 61  EAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV 120
           E KGLITPG+SVLIEPTSGNTGIGLAFMAAAK Y+LI+TMPASMS+ERRIIL+AFGAELV
Sbjct: 61  EEKGLITPGKSVLIEPTSGNTGIGLAFMAAAKGYKLILTMPASMSMERRIILKAFGAELV 120

Query: 121 LTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALV 180
           LTDP  GMKGA+QKA+E+ AK PN+Y+LQQFENPANPKIHYETTGPE+WK + G++D LV
Sbjct: 121 LTDPLLGMKGAIQKADELAAKMPNSYILQQFENPANPKIHYETTGPEIWKATAGKVDILV 180

Query: 181 SGIGTGGTITGAGKFLKEKNPNIKV 205
           SGIGTGGT+TG GK+LKE+NP IK+
Sbjct: 181 SGIGTGGTVTGTGKYLKEQNPEIKI 205

Oryza sativa subsp. japonica (taxid: 39947)

EC: 2

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 4

EC: 7

>sp|P31300|CYSKP_CAPAN Cysteine synthase, chloroplastic/chromoplastic OS=Capsicum annuum PE=2 SV=1

 Score =  318 bits (816), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 159/203 (78%), Positives = 188/203 (92%)

Query: 3   VESSNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEA 62
           +E  NIA+DVT+LIGNTP+VYLN IV GCVA IAAKLE+MEPC SVKDRIG+SMISDAE 
Sbjct: 62  IEGLNIAEDVTQLIGNTPMVYLNTIVKGCVANIAAKLEIMEPCCSVKDRIGFSMISDAEE 121

Query: 63  KGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLT 122
           KGLI+PG++VL+EPTSGNTGIGLAF+AA++ Y+LI+TMPASMSLERR+IL+AFGAELVLT
Sbjct: 122 KGLISPGKTVLVEPTSGNTGIGLAFIAASRGYKLILTMPASMSLERRVILKAFGAELVLT 181

Query: 123 DPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSG 182
           DPAKGMKGAV KAEEIL  TP+AY+LQQF+NPANPKIHYETTGPE+W+ + G+ID LV+G
Sbjct: 182 DPAKGMKGAVSKAEEILNNTPDAYILQQFDNPANPKIHYETTGPEIWEDTKGKIDILVAG 241

Query: 183 IGTGGTITGAGKFLKEKNPNIKV 205
           IGTGGTI+G G++LKEKNPNIK+
Sbjct: 242 IGTGGTISGTGRYLKEKNPNIKI 264

Capsicum annuum (taxid: 4072)

EC: 2

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 4

EC: 7

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	206
255552177	325	cysteine synthase, putative [Ricinus com	0.995	0.630	0.921	5e-98
224144420	325	predicted protein [Populus trichocarpa]	0.995	0.630	0.873	6e-95
225451235	325	PREDICTED: cysteine synthase isoform 2 [	0.995	0.630	0.887	2e-94
356573072	325	PREDICTED: cysteine synthase-like [Glyci	0.995	0.630	0.873	6e-94
224099811	325	predicted protein [Populus trichocarpa]	0.995	0.630	0.887	7e-94
334717670	329	cysteine synthase [Mimosa pudica]	0.995	0.623	0.863	8e-94
2493895	325	RecName: Full=Cysteine synthase; Short=C	0.995	0.630	0.882	9e-94
351727525	325	cysteine synthase [Glycine max] gi|18252	0.995	0.630	0.878	2e-93
224130736	325	predicted protein [Populus trichocarpa]	0.995	0.630	0.853	2e-93
86156030	251	cysteine synthase [Vitis pseudoreticulat	0.995	0.816	0.882	2e-93

>gi|255552177|ref|XP_002517133.1| cysteine synthase, putative [Ricinus communis] gi|223543768|gb|EEF45296.1| cysteine synthase, putative [Ricinus communis]

 Score =  362 bits (929), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 189/205 (92%), Positives = 200/205 (97%)

Query: 1   MAVESSNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDA 60
           MAVE   IAKDVTELIGNTPLVYLNN+V+GCVAR+AAKLEMMEPCSSVKDRIGYSMI+DA
Sbjct: 1   MAVEKYEIAKDVTELIGNTPLVYLNNVVDGCVARVAAKLEMMEPCSSVKDRIGYSMIADA 60

Query: 61  EAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV 120
           EAKGLITPG++VLIEPTSGNTGIGLAFMAAAK YRLIITMPASMSLERRIILRAFGAELV
Sbjct: 61  EAKGLITPGQNVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRIILRAFGAELV 120

Query: 121 LTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALV 180
           LTDPAKGMKGAVQKAEEILAKTPNAYMLQQFEN ANPKIHYETTGPE+WKGSGG+IDALV
Sbjct: 121 LTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENAANPKIHYETTGPEIWKGSGGKIDALV 180

Query: 181 SGIGTGGTITGAGKFLKEKNPNIKV 205
           SGIGTGGTITGAGK+LKE+NPNIK+
Sbjct: 181 SGIGTGGTITGAGKYLKEQNPNIKL 205

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224144420|ref|XP_002336146.1| predicted protein [Populus trichocarpa] gi|222874214|gb|EEF11345.1| predicted protein [Populus trichocarpa]

 Score =  352 bits (903), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 179/205 (87%), Positives = 194/205 (94%)

Query: 1   MAVESSNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDA 60
           MA E  +IAKDVTELIG TPLVYLNN+V+GCVARIAAKLEMMEPCSSVKDRIGYSMI DA
Sbjct: 1   MAEEKGSIAKDVTELIGKTPLVYLNNVVDGCVARIAAKLEMMEPCSSVKDRIGYSMIKDA 60

Query: 61  EAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV 120
           E KGLI PGESVLIEPTSGNTGIGLAFMAAAK YRLIITMPASMSLERR++L AFGAEL+
Sbjct: 61  EEKGLIKPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAFGAELI 120

Query: 121 LTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALV 180
           LTDPA+GMKGAVQKAEEILAKTPNAY+LQQFENPANPKIHYETTGPE+WKGSGG++DA V
Sbjct: 121 LTDPARGMKGAVQKAEEILAKTPNAYLLQQFENPANPKIHYETTGPEMWKGSGGKVDAFV 180

Query: 181 SGIGTGGTITGAGKFLKEKNPNIKV 205
           SGIGTGGTITGA K+LKE+NP+IK+
Sbjct: 181 SGIGTGGTITGAAKYLKEQNPDIKI 205

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225451235|ref|XP_002275990.1| PREDICTED: cysteine synthase isoform 2 [Vitis vinifera] gi|225451237|ref|XP_002275940.1| PREDICTED: cysteine synthase isoform 1 [Vitis vinifera] gi|359487829|ref|XP_003633658.1| PREDICTED: cysteine synthase [Vitis vinifera] gi|147819267|emb|CAN75607.1| hypothetical protein VITISV_033255 [Vitis vinifera] gi|298204909|emb|CBI34216.3| unnamed protein product [Vitis vinifera]

 Score =  350 bits (898), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 182/205 (88%), Positives = 196/205 (95%)

Query: 1   MAVESSNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDA 60
           MA E   IAKDVTELIG TPLVYLNN+V+GCVARIAAKLEMMEPCSSVKDRIGYSMI+DA
Sbjct: 1   MAEEKCFIAKDVTELIGKTPLVYLNNVVDGCVARIAAKLEMMEPCSSVKDRIGYSMITDA 60

Query: 61  EAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV 120
           E KGLITPGESVLIEPTSGNTGIGLAFMAAAK Y+LIITMPASMSLERRIILRAFGAELV
Sbjct: 61  EEKGLITPGESVLIEPTSGNTGIGLAFMAAAKGYKLIITMPASMSLERRIILRAFGAELV 120

Query: 121 LTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALV 180
           LTDPAKGMKGAVQKAEEILAKTPN+Y+LQQFENPANPKIHYETTGPE+W+G+GG++DA V
Sbjct: 121 LTDPAKGMKGAVQKAEEILAKTPNSYILQQFENPANPKIHYETTGPEIWRGTGGKVDAFV 180

Query: 181 SGIGTGGTITGAGKFLKEKNPNIKV 205
           SGIGTGGTITGAGKFLKE+N +IK+
Sbjct: 181 SGIGTGGTITGAGKFLKEQNSDIKL 205

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356573072|ref|XP_003554689.1| PREDICTED: cysteine synthase-like [Glycine max]

 Score =  348 bits (894), Expect = 6e-94,   Method: Compositional matrix adjust.
 Identities = 179/205 (87%), Positives = 195/205 (95%)

Query: 1   MAVESSNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDA 60
           MA E SNIAKDVTELIG TPLVYLN+IV+GCVA++AAKLEMMEPCSSVKDRIGYSMI DA
Sbjct: 1   MAAEKSNIAKDVTELIGKTPLVYLNHIVDGCVAKVAAKLEMMEPCSSVKDRIGYSMIVDA 60

Query: 61  EAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV 120
           E KGLITPGESVLIEPTSGNTGIGLAFMAAAK Y+LIITMP+SMSLERR ILRAFGAELV
Sbjct: 61  EEKGLITPGESVLIEPTSGNTGIGLAFMAAAKGYKLIITMPSSMSLERRTILRAFGAELV 120

Query: 121 LTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALV 180
           LTDPAKGMKGAVQKAEEI  KTPN+YMLQQFENPANPK+HYETTGPE+WKGS G++DALV
Sbjct: 121 LTDPAKGMKGAVQKAEEIRDKTPNSYMLQQFENPANPKVHYETTGPEIWKGSSGKVDALV 180

Query: 181 SGIGTGGTITGAGKFLKEKNPNIKV 205
           SGIGTGGT+TGAGK+LKE+NP+IK+
Sbjct: 181 SGIGTGGTVTGAGKYLKEQNPDIKL 205

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224099811|ref|XP_002311629.1| predicted protein [Populus trichocarpa] gi|222851449|gb|EEE88996.1| predicted protein [Populus trichocarpa]

 Score =  348 bits (893), Expect = 7e-94,   Method: Compositional matrix adjust.
 Identities = 182/205 (88%), Positives = 197/205 (96%)

Query: 1   MAVESSNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDA 60
           MAVE   IAKDVTELIG TPLVYLNN+++GCVARIAAKLE MEPCSSVKDRIGYSMI+DA
Sbjct: 1   MAVEKYEIAKDVTELIGKTPLVYLNNVLDGCVARIAAKLEGMEPCSSVKDRIGYSMIADA 60

Query: 61  EAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV 120
           EAKGLITPGESVLIEPTSGNTGIGLAFMAAAK Y+LIITMPASMS ERRIILRAFGAELV
Sbjct: 61  EAKGLITPGESVLIEPTSGNTGIGLAFMAAAKGYKLIITMPASMSNERRIILRAFGAELV 120

Query: 121 LTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALV 180
           LT+PAKGMKGAVQKAEEI AKTPNAY+LQQFENP+NPK+HYETTGPE+WKGSGG++DALV
Sbjct: 121 LTNPAKGMKGAVQKAEEIKAKTPNAYILQQFENPSNPKVHYETTGPEIWKGSGGKVDALV 180

Query: 181 SGIGTGGTITGAGKFLKEKNPNIKV 205
           SGIGTGGTITGAGK+LKE+NPNIK+
Sbjct: 181 SGIGTGGTITGAGKYLKEQNPNIKL 205

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|334717670|dbj|BAK38374.1| cysteine synthase [Mimosa pudica]

 Score =  348 bits (893), Expect = 8e-94,   Method: Compositional matrix adjust.
 Identities = 177/205 (86%), Positives = 197/205 (96%)

Query: 1   MAVESSNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDA 60
           MA+E   IAKDV+EL+G TPLVYLN+IV+GCVAR+AAKLEMMEPCSSVKDRIGYSMI+DA
Sbjct: 1   MALEKDCIAKDVSELVGKTPLVYLNHIVDGCVARVAAKLEMMEPCSSVKDRIGYSMIADA 60

Query: 61  EAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV 120
           E KGLITPGESVLIEPTSGNTGIGLAFMAAAK Y+LIITMP+SMSLERR ILRAFGA+LV
Sbjct: 61  EEKGLITPGESVLIEPTSGNTGIGLAFMAAAKGYKLIITMPSSMSLERRTILRAFGADLV 120

Query: 121 LTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALV 180
           LTDPAKGMKGAVQKAEEI+AKTPNAYMLQQFENPANPKIHYETTGPE+WKGSGG++DA V
Sbjct: 121 LTDPAKGMKGAVQKAEEIVAKTPNAYMLQQFENPANPKIHYETTGPEIWKGSGGKVDAFV 180

Query: 181 SGIGTGGTITGAGKFLKEKNPNIKV 205
           SGIGTGGT+TGAG++LKE+NP+IK+
Sbjct: 181 SGIGTGGTVTGAGRYLKEQNPDIKL 205

Source: Mimosa pudica

Species: Mimosa pudica

Genus: Mimosa

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|2493895|sp|Q43317.1|CYSK_CITLA RecName: Full=Cysteine synthase; Short=CSase; AltName: Full=Beta-PA/CSase; AltName: Full=Beta-pyrazolylalanine synthase; AltName: Full=L-mimosine synthase; AltName: Full=O-acetylserine (thiol)-lyase; Short=OAS-TL; AltName: Full=O-acetylserine sulfhydrylase gi|540497|dbj|BAA05965.1| cysteine synthase [Citrullus lanatus subsp. vulgaris]

 Score =  348 bits (892), Expect = 9e-94,   Method: Compositional matrix adjust.
 Identities = 181/205 (88%), Positives = 195/205 (95%)

Query: 1   MAVESSNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDA 60
           MA   S IAKDVTELIGNTPLVYLN +V+GCVAR+AAKLEMMEPCSSVKDRIGYSMISDA
Sbjct: 1   MADAKSTIAKDVTELIGNTPLVYLNRVVDGCVARVAAKLEMMEPCSSVKDRIGYSMISDA 60

Query: 61  EAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV 120
           E KGLITPGESVLIEPTSGNTGIGLAF+AAAK YRLII MPASMSLERR ILRAFGAELV
Sbjct: 61  ENKGLITPGESVLIEPTSGNTGIGLAFIAAAKGYRLIICMPASMSLERRTILRAFGAELV 120

Query: 121 LTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALV 180
           LTDPA+GMKGAVQKAEEI AKTPN+Y+LQQFENPANPKIHYETTGPE+W+GSGG+IDALV
Sbjct: 121 LTDPARGMKGAVQKAEEIKAKTPNSYILQQFENPANPKIHYETTGPEIWRGSGGKIDALV 180

Query: 181 SGIGTGGTITGAGKFLKEKNPNIKV 205
           SGIGTGGT+TGAGK+LKE+NPNIK+
Sbjct: 181 SGIGTGGTVTGAGKYLKEQNPNIKL 205

Source: Citrullus lanatus subsp. vulgaris

Species: Citrullus lanatus

Genus: Citrullus

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351727525|ref|NP_001235628.1| cysteine synthase [Glycine max] gi|18252506|gb|AAL66291.1|AF452451_1 cysteine synthase [Glycine max]

 Score =  347 bits (890), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 180/205 (87%), Positives = 195/205 (95%)

Query: 1   MAVESSNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDA 60
           MAVE S IAKDVTELIG TPLVYLN + +GCVAR+AAKLE+MEPCSSVKDRIGYSMI+DA
Sbjct: 1   MAVERSGIAKDVTELIGKTPLVYLNKLADGCVARVAAKLELMEPCSSVKDRIGYSMIADA 60

Query: 61  EAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV 120
           E KGLITPG+SVLIEPTSGNTGIGLAFMAAA+ Y+LIITMPASMSLERRIIL AFGAELV
Sbjct: 61  EEKGLITPGKSVLIEPTSGNTGIGLAFMAAARGYKLIITMPASMSLERRIILLAFGAELV 120

Query: 121 LTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALV 180
           LTDPAKGMKGAVQKAEEILAKTPNAY+LQQFENPANPK+HYETTGPE+WKGS G+IDA V
Sbjct: 121 LTDPAKGMKGAVQKAEEILAKTPNAYILQQFENPANPKVHYETTGPEIWKGSDGKIDAFV 180

Query: 181 SGIGTGGTITGAGKFLKEKNPNIKV 205
           SGIGTGGTITGAGK+LKE+NPNIK+
Sbjct: 181 SGIGTGGTITGAGKYLKEQNPNIKL 205

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224130736|ref|XP_002328363.1| predicted protein [Populus trichocarpa] gi|222838078|gb|EEE76443.1| predicted protein [Populus trichocarpa]

 Score =  347 bits (890), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 175/205 (85%), Positives = 194/205 (94%)

Query: 1   MAVESSNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDA 60
           MA E  +IAKDVTELIG TPLVYLNN+V+GCVAR+AAKLEMMEPCSSVKDRIGYSMI+DA
Sbjct: 1   MAEEKGSIAKDVTELIGKTPLVYLNNVVDGCVARVAAKLEMMEPCSSVKDRIGYSMITDA 60

Query: 61  EAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV 120
           E KGLI PGESVLIEPTSGNTGIGLAFMAAAK YRLIITMPASMSLERR++L AFGAEL+
Sbjct: 61  EEKGLIKPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAFGAELI 120

Query: 121 LTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALV 180
           LTDPA+G+ GAVQKAEEILAKTPNAY+LQQFENPANPK+HYETTGPE+WKGSGG++DA V
Sbjct: 121 LTDPARGINGAVQKAEEILAKTPNAYILQQFENPANPKVHYETTGPEMWKGSGGKVDAFV 180

Query: 181 SGIGTGGTITGAGKFLKEKNPNIKV 205
           SGIGTGGTITGA K+LKE+NP+IK+
Sbjct: 181 SGIGTGGTITGAAKYLKEQNPDIKI 205

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|86156030|gb|ABC86746.1| cysteine synthase [Vitis pseudoreticulata]

 Score =  347 bits (889), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 181/205 (88%), Positives = 195/205 (95%)

Query: 1   MAVESSNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDA 60
           MA E   IAKDVTELIG TPLVYLNN+V+GCVARIA KLEMMEPCSSVKDRIGYSMI+DA
Sbjct: 1   MAEEKCFIAKDVTELIGKTPLVYLNNVVDGCVARIAGKLEMMEPCSSVKDRIGYSMITDA 60

Query: 61  EAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV 120
           E KGLITPGESVLIEPTSGNTGIGLAFMAAAK Y+LIITMPASMSLERRIILRAFGAELV
Sbjct: 61  EEKGLITPGESVLIEPTSGNTGIGLAFMAAAKGYKLIITMPASMSLERRIILRAFGAELV 120

Query: 121 LTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALV 180
           LTDPAKGMKGAVQKAEEILAKTPN+Y+LQQFENPANPKIHYETTGPE+W+G+GG++DA V
Sbjct: 121 LTDPAKGMKGAVQKAEEILAKTPNSYILQQFENPANPKIHYETTGPEIWRGTGGKVDAFV 180

Query: 181 SGIGTGGTITGAGKFLKEKNPNIKV 205
           SGIGTGGTITGAGKFLKE+N +IK+
Sbjct: 181 SGIGTGGTITGAGKFLKEQNSDIKL 205

Source: Vitis pseudoreticulata

Species: Vitis pseudoreticulata

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	206
TAIR|locus:2130419	322	OASA1 "O-acetylserine (thiol)	0.975	0.624	0.791	2.2e-82
TAIR|locus:2043964	392	OASB "O-acetylserine (thiol) l	0.985	0.517	0.709	3.9e-76
TAIR|locus:2080417	433	OASC "O-acetylserine (thiol) l	0.966	0.459	0.698	6.5e-74
TAIR|locus:2143814	323	CYSD2 "cysteine synthase D2" [	0.961	0.613	0.676	3e-69
TAIR|locus:2114804	324	CYSD1 "cysteine synthase D1" [	0.995	0.632	0.634	7.2e-68
TAIR|locus:2143754	323	DES1 "L-cysteine desulfhydrase	0.961	0.613	0.656	4.5e-66
TAIR|locus:2096454	404	CS26 "cysteine synthase 26" [A	0.980	0.5	0.613	1.4e-64
UNIPROTKB|Q76MX2	351	PCAS-1 "Bifunctional L-3-cyano	0.970	0.569	0.575	1.2e-60
UNIPROTKB|Q1KLZ2	376	CAS1 "L-3-cyanoalanine synthas	0.970	0.531	0.555	3.1e-60
UNIPROTKB|Q1KLZ1	375	CAS2 "L-3-cyanoalanine synthas	0.975	0.536	0.552	8.1e-60

TAIR|locus:2130419 OASA1 "O-acetylserine (thiol) lyase (OAS-TL) isoform A1" [Arabidopsis thaliana (taxid:3702)]

 Score = 826 (295.8 bits), Expect = 2.2e-82, P = 2.2e-82
 Identities = 159/201 (79%), Positives = 173/201 (86%)

Query:     5 SSNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKG 64
             +S IAKDVTELIGNTPLVYLNN+  GCV R+AAKLEMMEPCSSVKDRIG+SMISDAE KG
Sbjct:     2 ASRIAKDVTELIGNTPLVYLNNVAEGCVGRVAAKLEMMEPCSSVKDRIGFSMISDAEKKG 61

Query:    65 LITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDP 124
             LI PGESVLIEPTSGNTG+GLAF AAAK Y+LIITMPASMS ERRIIL AFG ELVLTDP
Sbjct:    62 LIKPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERRIILLAFGVELVLTDP 121

Query:   125 AKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSXXX 184
             AKGMKGA+ KAEEILAKTPN YMLQQFENPANPKIHYETTGPE+WKG+GG+ID  VS   
Sbjct:   122 AKGMKGAIAKAEEILAKTPNGYMLQQFENPANPKIHYETTGPEIWKGTGGKIDGFVSGIG 181

Query:   185 XXXXXXXXXKFLKEKNPNIKV 205
                      K+LKE+N N+K+
Sbjct:   182 TGGTITGAGKYLKEQNANVKL 202

GO:0003824 "catalytic activity" evidence=IEA

GO:0004124 "cysteine synthase activity" evidence=IEA;IGI;IDA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006535 "cysteine biosynthetic process from serine" evidence=IEA;TAS

GO:0008152 "metabolic process" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0005829 "cytosol" evidence=ISS;IDA

GO:0046686 "response to cadmium ion" evidence=IEP;RCA;IMP;IDA

GO:0007568 "aging" evidence=IMP

GO:0005634 "nucleus" evidence=IDA

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0005777 "peroxisome" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0019344 "cysteine biosynthetic process" evidence=RCA;IMP

GO:0048046 "apoplast" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0006094 "gluconeogenesis" evidence=RCA

GO:0006096 "glycolysis" evidence=RCA

GO:0006816 "calcium ion transport" evidence=RCA

GO:0006833 "water transport" evidence=RCA

GO:0006972 "hyperosmotic response" evidence=RCA

GO:0007030 "Golgi organization" evidence=RCA

GO:0009266 "response to temperature stimulus" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009651 "response to salt stress" evidence=RCA

GO:0009684 "indoleacetic acid biosynthetic process" evidence=RCA

GO:0009805 "coumarin biosynthetic process" evidence=RCA

GO:0009853 "photorespiration" evidence=RCA

GO:0019761 "glucosinolate biosynthetic process" evidence=RCA

TAIR|locus:2043964 OASB "O-acetylserine (thiol) lyase B" [Arabidopsis thaliana (taxid:3702)]

 Score = 767 (275.1 bits), Expect = 3.9e-76, P = 3.9e-76
 Identities = 144/203 (70%), Positives = 172/203 (84%)

Query:     3 VESSNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEA 62
             VE  NIA +  +LIG TP+VYLNN+V GCVA +AAKLE+MEPC SVKDRIGYSMI+DAE 
Sbjct:    70 VEGLNIADNAAQLIGKTPMVYLNNVVKGCVASVAAKLEIMEPCCSVKDRIGYSMITDAEE 129

Query:    63 KGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLT 122
             KGLITPG+SVL+E TSGNTGIGLAF+AA+K Y+LI+TMPASMSLERR++LRAFGAELVLT
Sbjct:   130 KGLITPGKSVLVESTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLRAFGAELVLT 189

Query:   123 DPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSX 182
             +PAKGM GA+QKAEEIL KTPN+YMLQQF+NPANPKIHYETTGPE+W+ + G+ID LV+ 
Sbjct:   190 EPAKGMTGAIQKAEEILKKTPNSYMLQQFDNPANPKIHYETTGPEIWEDTRGKIDILVAG 249

Query:   183 XXXXXXXXXXXKFLKEKNPNIKV 205
                        +F+KE+ P +KV
Sbjct:   250 IGTGGTITGVGRFIKERKPELKV 272

GO:0003824 "catalytic activity" evidence=IEA

GO:0004124 "cysteine synthase activity" evidence=IEA;ISS;IDA

GO:0006535 "cysteine biosynthetic process from serine" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0009536 "plastid" evidence=TAS

GO:0019344 "cysteine biosynthetic process" evidence=RCA;IDA

GO:0005739 "mitochondrion" evidence=IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0046686 "response to cadmium ion" evidence=IEP

GO:0048046 "apoplast" evidence=IDA

GO:0000096 "sulfur amino acid metabolic process" evidence=RCA

GO:0006546 "glycine catabolic process" evidence=RCA

GO:0006636 "unsaturated fatty acid biosynthetic process" evidence=RCA

GO:0006733 "oxidoreduction coenzyme metabolic process" evidence=RCA

GO:0006766 "vitamin metabolic process" evidence=RCA

GO:0008652 "cellular amino acid biosynthetic process" evidence=RCA

GO:0009072 "aromatic amino acid family metabolic process" evidence=RCA

GO:0009073 "aromatic amino acid family biosynthetic process" evidence=RCA

GO:0009106 "lipoate metabolic process" evidence=RCA

GO:0009108 "coenzyme biosynthetic process" evidence=RCA

GO:0009117 "nucleotide metabolic process" evidence=RCA

GO:0009684 "indoleacetic acid biosynthetic process" evidence=RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA

GO:0009965 "leaf morphogenesis" evidence=RCA

GO:0015995 "chlorophyll biosynthetic process" evidence=RCA

GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=RCA

GO:0019748 "secondary metabolic process" evidence=RCA

GO:0019761 "glucosinolate biosynthetic process" evidence=RCA

GO:0030154 "cell differentiation" evidence=RCA

GO:0044272 "sulfur compound biosynthetic process" evidence=RCA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA

GO:0005768 "endosome" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

TAIR|locus:2080417 OASC "O-acetylserine (thiol) lyase isoform C" [Arabidopsis thaliana (taxid:3702)]

 Score = 746 (267.7 bits), Expect = 6.5e-74, P = 6.5e-74
 Identities = 139/199 (69%), Positives = 168/199 (84%)

Query:     7 NIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLI 66
             NIA +V++LIG TP+VYLN+I  GCVA IAAKLE+MEPC SVKDRIGYSM++DAE KG I
Sbjct:   112 NIADNVSQLIGKTPMVYLNSIAKGCVANIAAKLEIMEPCCSVKDRIGYSMVTDAEQKGFI 171

Query:    67 TPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAK 126
             +PG+SVL+EPTSGNTGIGLAF+AA++ YRLI+TMPASMS+ERR++L+AFGAELVLTDPAK
Sbjct:   172 SPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVLTDPAK 231

Query:   127 GMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSXXXXX 186
             GM GAVQKAEEIL  TP+AYMLQQF+NPANPKIHYETTGPE+W  + G++D  V+     
Sbjct:   232 GMTGAVQKAEEILKNTPDAYMLQQFDNPANPKIHYETTGPEIWDDTKGKVDIFVAGIGTG 291

Query:   187 XXXXXXXKFLKEKNPNIKV 205
                    +F+KEKNP  +V
Sbjct:   292 GTITGVGRFIKEKNPKTQV 310

GO:0003824 "catalytic activity" evidence=IEA

GO:0004124 "cysteine synthase activity" evidence=IEA;ISS;IDA

GO:0005739 "mitochondrion" evidence=ISM;IDA;TAS

GO:0006535 "cysteine biosynthetic process from serine" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0019344 "cysteine biosynthetic process" evidence=RCA;IDA

GO:0005515 "protein binding" evidence=IPI

GO:0009507 "chloroplast" evidence=IDA

GO:0005524 "ATP binding" evidence=IDA

GO:0048868 "pollen tube development" evidence=IMP

GO:0008270 "zinc ion binding" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0006569 "tryptophan catabolic process" evidence=RCA

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0009684 "indoleacetic acid biosynthetic process" evidence=RCA

GO:0034976 "response to endoplasmic reticulum stress" evidence=RCA

TAIR|locus:2143814 CYSD2 "cysteine synthase D2" [Arabidopsis thaliana (taxid:3702)]

 Score = 702 (252.2 bits), Expect = 3.0e-69, P = 3.0e-69
 Identities = 134/198 (67%), Positives = 160/198 (80%)

Query:     8 IAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLIT 67
             I  D+TELIGNTP+VYLNN+V+GCVARIAAKLEMMEPCSSVKDRI YSMI DAE KGLIT
Sbjct:     7 IKNDITELIGNTPMVYLNNVVDGCVARIAAKLEMMEPCSSVKDRIAYSMIKDAEDKGLIT 66

Query:    68 PGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKG 127
             PG+S LIEPT+GNTGIGLA M AA+ Y++I+ MP++MSLERRIILRA GAEL L+D   G
Sbjct:    67 PGKSTLIEPTAGNTGIGLACMGAARGYKVILVMPSTMSLERRIILRALGAELHLSDQRIG 126

Query:   128 MKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSXXXXXX 187
             +KG ++K E IL+KTP  Y+ QQFENPANP+IHY TTGPE+W+ S G++D LV+      
Sbjct:   127 LKGMLEKTEAILSKTPGGYIPQQFENPANPEIHYRTTGPEIWRDSAGKVDILVAGVGTGG 186

Query:   188 XXXXXXKFLKEKNPNIKV 205
                   KFLKE+N +IKV
Sbjct:   187 TATGVGKFLKEQNKDIKV 204

GO:0003824 "catalytic activity" evidence=IEA

GO:0004124 "cysteine synthase activity" evidence=IEA;ISS;IMP

GO:0005739 "mitochondrion" evidence=ISM

GO:0006535 "cysteine biosynthetic process from serine" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0019344 "cysteine biosynthetic process" evidence=ISS

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

TAIR|locus:2114804 CYSD1 "cysteine synthase D1" [Arabidopsis thaliana (taxid:3702)]

 Score = 689 (247.6 bits), Expect = 7.2e-68, P = 7.2e-68
 Identities = 130/205 (63%), Positives = 162/205 (79%)

Query:     1 MAVESSNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDA 60
             M  +  +I  D T+LIGNTP+VYLNNIV+GCVARIAAKLEMMEPCSSVK+RI Y MI DA
Sbjct:     1 MEEDRCSIKDDATQLIGNTPMVYLNNIVDGCVARIAAKLEMMEPCSSVKERIAYGMIKDA 60

Query:    61 EAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV 120
             E KGLITPG+S LIE TSGNTGIGLAF+ AAK Y++++TMP+SMSLER+IIL A GAE+ 
Sbjct:    61 EDKGLITPGKSTLIEATSGNTGIGLAFIGAAKGYKVVLTMPSSMSLERKIILLALGAEVH 120

Query:   121 LTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALV 180
             LTDP+KG++G + KAEEI +K P++ ML+QF+NP+NP+ HY TTGPE+W+ S G +D LV
Sbjct:   121 LTDPSKGVQGIIDKAEEICSKNPDSIMLEQFKNPSNPQTHYRTTGPEIWRDSAGEVDILV 180

Query:   181 SXXXXXXXXXXXXKFLKEKNPNIKV 205
             +            +FLKEKN + KV
Sbjct:   181 AGVGTGGTLSGSGRFLKEKNKDFKV 205

GO:0003824 "catalytic activity" evidence=IEA

GO:0004124 "cysteine synthase activity" evidence=IEA;ISS;IDA;IMP

GO:0006535 "cysteine biosynthetic process from serine" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0019344 "cysteine biosynthetic process" evidence=ISS;RCA;IDA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0000096 "sulfur amino acid metabolic process" evidence=RCA

GO:0008652 "cellular amino acid biosynthetic process" evidence=RCA

GO:0009069 "serine family amino acid metabolic process" evidence=RCA

GO:0042545 "cell wall modification" evidence=RCA

TAIR|locus:2143754 DES1 "L-cysteine desulfhydrase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 672 (241.6 bits), Expect = 4.5e-66, P = 4.5e-66
 Identities = 130/198 (65%), Positives = 157/198 (79%)

Query:     8 IAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLIT 67
             I  DVTELIGNTP+VYLN IV+GCVARIAAKLEMMEPCSS+KDRI YSMI DAE KGLIT
Sbjct:     7 IKNDVTELIGNTPMVYLNKIVDGCVARIAAKLEMMEPCSSIKDRIAYSMIKDAEDKGLIT 66

Query:    68 PGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKG 127
             PG+S LIE T GNTGIGLA + A++ Y++I+ MP++MSLERRIILRA GAE+ LTD + G
Sbjct:    67 PGKSTLIEATGGNTGIGLASIGASRGYKVILLMPSTMSLERRIILRALGAEVHLTDISIG 126

Query:   128 MKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSXXXXXX 187
             +KG ++KA+EIL+KTP  Y+  QF NP NP+IHY TTGPE+W+ S G++D LV+      
Sbjct:   127 IKGQLEKAKEILSKTPGGYIPHQFINPENPEIHYRTTGPEIWRDSAGKVDILVAGVGTGG 186

Query:   188 XXXXXXKFLKEKNPNIKV 205
                   KFLKEKN +IKV
Sbjct:   187 TVTGTGKFLKEKNKDIKV 204

GO:0003824 "catalytic activity" evidence=IEA

GO:0004124 "cysteine synthase activity" evidence=IEA;ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0006535 "cysteine biosynthetic process from serine" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0019344 "cysteine biosynthetic process" evidence=ISS

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

TAIR|locus:2096454 CS26 "cysteine synthase 26" [Arabidopsis thaliana (taxid:3702)]

 Score = 658 (236.7 bits), Expect = 1.4e-64, P = 1.4e-64
 Identities = 124/202 (61%), Positives = 161/202 (79%)

Query:     4 ESSNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAK 63
             E+ NIA+DVT+LIG+TP+VYLN + +GC+A IAAKLE MEPC SVKDRIG SMI++AE  
Sbjct:    95 ETVNIAEDVTQLIGSTPMVYLNRVTDGCLADIAAKLESMEPCRSVKDRIGLSMINEAENS 154

Query:    64 GLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTD 123
             G ITP ++VL+EPT+GNTG+G+AF+AAAK Y+LI+TMPAS+++ERR++LRA GAE+VLT+
Sbjct:   155 GAITPRKTVLVEPTTGNTGLGIAFVAAAKGYKLIVTMPASINIERRMLLRALGAEIVLTN 214

Query:   124 PAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSXX 183
             P KG+KGAV KA+EI+ KT NAYM QQF+N AN KIH+ETTGPE+W+ + G +D  V+  
Sbjct:   215 PEKGLKGAVDKAKEIVLKTKNAYMFQQFDNTANTKIHFETTGPEIWEDTMGNVDIFVAGI 274

Query:   184 XXXXXXXXXXKFLKEKNPNIKV 205
                        FLK  N +IKV
Sbjct:   275 GTGGTVTGTGGFLKMMNKDIKV 296

GO:0003824 "catalytic activity" evidence=IEA

GO:0004124 "cysteine synthase activity" evidence=IEA;ISS;IDA

GO:0005739 "mitochondrion" evidence=ISM

GO:0019344 "cysteine biosynthetic process" evidence=ISS

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0009507 "chloroplast" evidence=IDA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=IMP

GO:0015979 "photosynthesis" evidence=IMP

GO:0090322 "regulation of superoxide metabolic process" evidence=IMP

GO:0009643 "photosynthetic acclimation" evidence=IMP

GO:0031977 "thylakoid lumen" evidence=IDA

UNIPROTKB|Q76MX2 PCAS-1 "Bifunctional L-3-cyanoalanine synthase/cysteine synthase 1, mitochondrial" [Solanum tuberosum (taxid:4113)]

 Score = 621 (223.7 bits), Expect = 1.2e-60, P = 1.2e-60
 Identities = 115/200 (57%), Positives = 148/200 (74%)

Query:     6 SNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGL 65
             +NI   V++LIG TPLVYLN +  GC A IA K EMM+P SS+KDR  ++MI+DAE KGL
Sbjct:    30 TNIKTQVSQLIGKTPLVYLNKVSEGCGAYIAVKQEMMQPTSSIKDRPAFAMINDAEKKGL 89

Query:    66 ITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPA 125
             ITPG++ LIEPTSGN GI +AFMAA K Y++I+TMP+  SLERR+ +RAFGA+LV TDP 
Sbjct:    90 ITPGKTTLIEPTSGNMGISMAFMAAMKGYKMILTMPSYTSLERRVTMRAFGADLVTTDPT 149

Query:   126 KGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSXXXX 185
             KGM G ++KA ++L  TPNAYMLQQF NPAN + H+ETTGPE+W+ + G +D  V     
Sbjct:   150 KGMGGTIKKAYDLLESTPNAYMLQQFSNPANTQAHFETTGPEIWEDTQGNVDIFVMGIGS 209

Query:   186 XXXXXXXXKFLKEKNPNIKV 205
                     ++LK KNPN+K+
Sbjct:   210 GGTVSGVGQYLKSKNPNVKI 229

GO:0004124 "cysteine synthase activity" evidence=IDA

GO:0006534 "cysteine metabolic process" evidence=IDA

GO:0019499 "cyanide metabolic process" evidence=IDA

GO:0050017 "L-3-cyanoalanine synthase activity" evidence=IDA

UNIPROTKB|Q1KLZ2 CAS1 "L-3-cyanoalanine synthase 1, mitochondrial" [Malus x domestica (taxid:3750)]

 Score = 617 (222.3 bits), Expect = 3.1e-60, P = 3.1e-60
 Identities = 111/200 (55%), Positives = 148/200 (74%)

Query:     6 SNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGL 65
             + I   V++LIG TP+VYLN +  GC A IA K EM +P +S+KDR   SMI+DAE KGL
Sbjct:    53 TQIKTQVSQLIGRTPIVYLNKVTEGCGAYIAVKQEMFQPTASIKDRPALSMINDAEEKGL 112

Query:    66 ITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPA 125
             ITPGE++LIEPTSGN GI +AFMAA + Y++++TMP+  SLERR+ +R FGA+L+LTDP 
Sbjct:   113 ITPGETILIEPTSGNMGISMAFMAAMRGYKMVLTMPSYTSLERRVCMRCFGADLILTDPT 172

Query:   126 KGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSXXXX 185
             KGM G V+KA ++L  TPNAYMLQQF NPAN K+H+ETTGPE+W+ + G++D  V     
Sbjct:   173 KGMGGTVKKAYDLLESTPNAYMLQQFSNPANTKVHFETTGPEIWEDTNGQVDIFVMGIGS 232

Query:   186 XXXXXXXXKFLKEKNPNIKV 205
                     ++LK KNPN+++
Sbjct:   233 GGTVSGVGQYLKSKNPNVQI 252

GO:0009836 "fruit ripening, climacteric" evidence=IDA

GO:0050017 "L-3-cyanoalanine synthase activity" evidence=IDA

UNIPROTKB|Q1KLZ1 CAS2 "L-3-cyanoalanine synthase 2, mitochondrial" [Malus x domestica (taxid:3750)]

 Score = 613 (220.8 bits), Expect = 8.1e-60, P = 8.1e-60
 Identities = 111/201 (55%), Positives = 148/201 (73%)

Query:     5 SSNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKG 64
             ++ I   V++LIG TP+VYLN +  GC A IA K EM +P +S+KDR   SMI+DAE KG
Sbjct:    53 ATQIKTQVSQLIGRTPIVYLNKVTEGCGAFIAVKQEMFQPTASIKDRPALSMINDAEEKG 112

Query:    65 LITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDP 124
             LITPGE+ LIEPTSGN GI +AFMAA K Y++++TMP+  SLERR+ +R FGA+L+LTDP
Sbjct:   113 LITPGETTLIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRVCMRCFGADLILTDP 172

Query:   125 AKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSXXX 184
              KGM G V+KA ++L  TPNA+MLQQF NPAN K+H+ETTGPE+W+ + G++D  V    
Sbjct:   173 TKGMGGTVKKAYDLLESTPNAFMLQQFSNPANTKVHFETTGPEIWEDTNGQVDIFVMGIG 232

Query:   185 XXXXXXXXXKFLKEKNPNIKV 205
                      ++LK KNPN+++
Sbjct:   233 SGGTVSGVGQYLKSKNPNVQI 253

GO:0009836 "fruit ripening, climacteric" evidence=IDA

GO:0050017 "L-3-cyanoalanine synthase activity" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P0A535	CYSK_MYCBO	2, ., 5, ., 1, ., 4, 7	0.5628	0.9514	0.6322	yes	no
P0A534	CYSK_MYCTU	2, ., 5, ., 1, ., 4, 7	0.5628	0.9514	0.6322	yes	no
P63871	CYSK_STAAN	2, ., 5, ., 1, ., 4, 7	0.5306	0.9368	0.6225	yes	no
P63872	CYSK_STAAW	2, ., 5, ., 1, ., 4, 7	0.5306	0.9368	0.6225	yes	no
P37887	CYSK_BACSU	2, ., 5, ., 1, ., 4, 7	0.5728	0.9514	0.6363	yes	no
P63870	CYSK_STAAM	2, ., 5, ., 1, ., 4, 7	0.5306	0.9368	0.6225	yes	no
P47998	CYSK1_ARATH	2, ., 5, ., 1, ., 4, 7	0.8507	0.9757	0.6242	yes	no
P38076	CYSK_WHEAT	2, ., 5, ., 1, ., 4, 7	0.8208	0.9757	0.6184	N/A	no
Q6GJF8	CYSK_STAAR	2, ., 5, ., 1, ., 4, 7	0.5306	0.9368	0.6225	yes	no
Q6GBX5	CYSK_STAAS	2, ., 5, ., 1, ., 4, 7	0.5306	0.9368	0.6225	yes	no
O81154	CYSK_SOLTU	2, ., 5, ., 1, ., 4, 7	0.8341	0.9951	0.6307	N/A	no
Q5HIG2	CYSK_STAAC	2, ., 5, ., 1, ., 4, 7	0.5306	0.9368	0.6225	yes	no
Q8CMT6	CYSK_STAES	2, ., 5, ., 1, ., 4, 7	0.5561	0.9271	0.6161	yes	no
O32978	CYSK_MYCLE	2, ., 5, ., 1, ., 4, 7	0.5714	0.9368	0.6225	yes	no
Q7DDL5	CYSK_NEIMB	2, ., 5, ., 1, ., 4, 7	0.5326	0.9563	0.6354	yes	no
Q43317	CYSK_CITLA	2, ., 5, ., 1, ., 5, 2	0.8829	0.9951	0.6307	N/A	no
Q00834	CYSK_SPIOL	2, ., 5, ., 1, ., 4, 7	0.8243	0.9951	0.6307	N/A	no
P80608	CYSK_MAIZE	2, ., 5, ., 1, ., 4, 7	0.8	0.9951	0.6307	N/A	no
O23733	CYSK1_BRAJU	2, ., 5, ., 1, ., 4, 7	0.8507	0.9757	0.6242	N/A	no
Q5HRP1	CYSK_STAEQ	2, ., 5, ., 1, ., 4, 7	0.5561	0.9271	0.6161	yes	no
Q9XEA6	CYSK1_ORYSJ	2, ., 5, ., 1, ., 4, 7	0.8232	0.9611	0.6168	yes	no
O23735	CYSK2_BRAJU	2, ., 5, ., 1, ., 4, 7	0.8434	0.9611	0.6111	N/A	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.5.1.47	0.946
3rd Layer	2.5.1	0.963

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	grail3.1757000202	O-acetylserine (thiol) lyase (EC-2.5.1.47) (326 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	estExt_fgenesh4_pm.C_LG_XV0472	serine O-acetyltransferase (EC-2.3.1.30) (293 aa)	•		•			•	•		0.942
	estExt_fgenesh4_pg.C_410108	serine O-acetyltransferase (EC-2.3.1.30) (294 aa)	•		•			•	•		0.942
	estExt_fgenesh4_pm.C_LG_I1139	serine O-acetyltransferase (EC-2.3.1.30) (334 aa)	•		•			•	•		0.939
	estExt_fgenesh4_pg.C_LG_V0392	hypothetical protein (395 aa)			•			•	•		0.923
	gw1.IX.3567.1	sulfite reductase (EC-1.8.7.1) (576 aa)						•	•		0.917
	gw1.I.1513.1	sulfite reductase (EC-1.8.7.1) (634 aa)						•	•		0.914
	estExt_Genewise1_v1.C_LG_I4741	phosphateglycerate kinase (EC-2.5.1.47) (424 aa)			•			•	•	•	0.907
	gw1.XIV.1323.1	cysteine synthase/L-3-cyanoalanine synthase (EC-4.4.1.9) (342 aa)			•			•		•	0.902
	grail3.0039007102	RecName- Full=Cysteine synthase; EC=2.5.1.47; (375 aa)			•			•		•	0.902
	gw1.10449.1.1	annotation not avaliable (181 aa)			•			•		•	0.901

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	206
PLN02565	322	PLN02565, PLN02565, cysteine synthase	1e-138
TIGR01136	299	TIGR01136, cysKM, cysteine synthase	1e-111
PLN00011	323	PLN00011, PLN00011, cysteine synthase	1e-109
TIGR01139	298	TIGR01139, cysK, cysteine synthase A	1e-106
PLN03013	429	PLN03013, PLN03013, cysteine synthase	1e-105
cd01561	291	cd01561, CBS_like, CBS_like: This subgroup include	1e-105
COG0031	300	COG0031, CysK, Cysteine synthase [Amino acid trans	1e-101
PLN02556	368	PLN02556, PLN02556, cysteine synthase/L-3-cyanoala	1e-99
PRK10717	330	PRK10717, PRK10717, cysteine synthase A; Provision	3e-84
PRK11761	296	PRK11761, cysM, cysteine synthase B; Provisional	1e-76
TIGR01137	454	TIGR01137, cysta_beta, cystathionine beta-synthase	1e-68
TIGR01138	290	TIGR01138, cysM, cysteine synthase B	3e-68
cd00640	244	cd00640, Trp-synth-beta_II, Tryptophan synthase be	5e-62
TIGR03945	304	TIGR03945, PLP_SbnA_fam, 2,3-diaminopropionate bio	6e-54
pfam00291	295	pfam00291, PALP, Pyridoxal-phosphate dependent enz	2e-45
PLN02356	423	PLN02356, PLN02356, phosphateglycerate kinase	1e-31
COG1171	347	COG1171, IlvA, Threonine dehydratase [Amino acid t	5e-14
cd01562	304	cd01562, Thr-dehyd, Threonine dehydratase: The fir	6e-12
cd01563	324	cd01563, Thr-synth_1, Threonine synthase is a pyri	5e-10
TIGR01124	499	TIGR01124, ilvA_2Cterm, threonine ammonia-lyase, b	7e-10
TIGR01127	380	TIGR01127, ilvA_1Cterm, threonine ammonia-lyase, m	2e-07
TIGR02079	409	TIGR02079, THD1, threonine dehydratase	2e-06
PRK12483	521	PRK12483, PRK12483, threonine dehydratase; Reviewe	3e-06
COG0498	411	COG0498, ThrC, Threonine synthase [Amino acid tran	4e-06
PRK09224	504	PRK09224, PRK09224, threonine dehydratase; Reviewe	4e-05
PRK06382	406	PRK06382, PRK06382, threonine dehydratase; Provisi	8e-05
PRK06381	319	PRK06381, PRK06381, threonine synthase; Validated	1e-04
PRK08638	333	PRK08638, PRK08638, threonine dehydratase; Validat	2e-04
PRK06815	317	PRK06815, PRK06815, hypothetical protein; Provisio	3e-04
PRK06110	322	PRK06110, PRK06110, hypothetical protein; Provisio	3e-04
PRK08329	347	PRK08329, PRK08329, threonine synthase; Validated	7e-04
PRK06450	338	PRK06450, PRK06450, threonine synthase; Validated	7e-04
PRK06721	352	PRK06721, PRK06721, threonine synthase; Reviewed	8e-04
TIGR03528	396	TIGR03528, 2_3_DAP_am_ly, diaminopropionate ammoni	0.003
PRK08206	399	PRK08206, PRK08206, diaminopropionate ammonia-lyas	0.004

>gnl|CDD|166206 PLN02565, PLN02565, cysteine synthase

 Score =  390 bits (1002), Expect = e-138
 Identities = 180/202 (89%), Positives = 195/202 (96%)

Query: 4   ESSNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAK 63
           E S+IAKDVTELIG TPLVYLNN+V+GCVARIAAKLEMMEPCSSVKDRIGYSMI+DAE K
Sbjct: 1   EKSSIAKDVTELIGKTPLVYLNNVVDGCVARIAAKLEMMEPCSSVKDRIGYSMITDAEEK 60

Query: 64  GLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTD 123
           GLI PGESVLIEPTSGNTGIGLAFMAAAK Y+LIITMPASMSLERRIIL AFGAELVLTD
Sbjct: 61  GLIKPGESVLIEPTSGNTGIGLAFMAAAKGYKLIITMPASMSLERRIILLAFGAELVLTD 120

Query: 124 PAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGI 183
           PAKGMKGAVQKAEEILAKTPN+Y+LQQFENPANPKIHYETTGPE+WKG+GG++DA VSGI
Sbjct: 121 PAKGMKGAVQKAEEILAKTPNSYILQQFENPANPKIHYETTGPEIWKGTGGKVDAFVSGI 180

Query: 184 GTGGTITGAGKFLKEKNPNIKV 205
           GTGGTITGAGK+LKE+NP+IK+
Sbjct: 181 GTGGTITGAGKYLKEQNPDIKL 202

Length = 322

>gnl|CDD|233286 TIGR01136, cysKM, cysteine synthase

 Score =  318 bits (818), Expect = e-111
 Identities = 124/194 (63%), Positives = 153/194 (78%), Gaps = 1/194 (0%)

Query: 12  VTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGES 71
           + ELIGNTPLV LN +  GC AR+ AKLE   P  SVKDRI  SMI DAE +GL+ PG+ 
Sbjct: 1   IEELIGNTPLVRLNRLAPGCDARVLAKLEGRNPSGSVKDRIALSMIEDAEKRGLLKPGD- 59

Query: 72  VLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGA 131
            +IE TSGNTGI LA +AAAK Y+LI+TMP +MSLERR +LRA+GAEL+LT   +GMKGA
Sbjct: 60  TIIEATSGNTGIALAMVAAAKGYKLILTMPETMSLERRKLLRAYGAELILTPAEEGMKGA 119

Query: 132 VQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITG 191
           + KAEE+ A+T    ML QFENPANP+ HY+TTGPE+W+ + GRID  V+G+GTGGTITG
Sbjct: 120 IDKAEELAAETNKYVMLDQFENPANPEAHYKTTGPEIWRDTDGRIDHFVAGVGTGGTITG 179

Query: 192 AGKFLKEKNPNIKV 205
            G++LKE+NPNIK+
Sbjct: 180 VGRYLKEQNPNIKI 193

This model discriminates cysteine synthases (EC 2.5.1.47) (both CysK and CysM) from cystathionine beta-synthase, a protein found primarily in eukaryotes and carrying a C-terminal CBS domain lacking from this protein. Bacterial proteins lacking the CBS domain but otherwise showing resemblamnce to cystathionine beta-synthases and considerable phylogenetic distance from known cysteine synthases were excluded from the seed and score below the trusted cutoff [Amino acid biosynthesis, Serine family]. Length = 299

>gnl|CDD|177651 PLN00011, PLN00011, cysteine synthase

 Score =  314 bits (806), Expect = e-109
 Identities = 146/198 (73%), Positives = 172/198 (86%)

Query: 8   IAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLIT 67
           I  DVTELIGNTP+VYLNNIV+GCVARIAAKLEMMEPCSSVKDRI YSMI DAE KGLIT
Sbjct: 7   IKNDVTELIGNTPMVYLNNIVDGCVARIAAKLEMMEPCSSVKDRIAYSMIKDAEDKGLIT 66

Query: 68  PGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKG 127
           PG+S LIE T+GNTGIGLA + AA+ Y++I+ MP++MSLERRIILRA GAE+ LTD + G
Sbjct: 67  PGKSTLIEATAGNTGIGLACIGAARGYKVILVMPSTMSLERRIILRALGAEVHLTDQSIG 126

Query: 128 MKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGG 187
           +KG ++KAEEIL+KTP  Y+ QQFENPANP+IHY TTGPE+W+ S G++D LV+G+GTGG
Sbjct: 127 LKGMLEKAEEILSKTPGGYIPQQFENPANPEIHYRTTGPEIWRDSAGKVDILVAGVGTGG 186

Query: 188 TITGAGKFLKEKNPNIKV 205
           T TG GKFLKEKN +IKV
Sbjct: 187 TATGVGKFLKEKNKDIKV 204

Length = 323

>gnl|CDD|233288 TIGR01139, cysK, cysteine synthase A

 Score =  307 bits (788), Expect = e-106
 Identities = 124/195 (63%), Positives = 157/195 (80%), Gaps = 3/195 (1%)

Query: 12  VTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGES 71
           ++ELIGNTPLV LN I  GC A +  KLE   P  SVKDRI  +MI DAE +GL+ PG+ 
Sbjct: 1   ISELIGNTPLVRLNRI-EGCNANVFVKLEGRNPSGSVKDRIALNMIWDAEKRGLLKPGK- 58

Query: 72  VLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGA 131
            ++EPTSGNTGI LA +AAA+ Y+LI+TMP +MS+ERR +L+A+GAELVLT  A+GMKGA
Sbjct: 59  TIVEPTSGNTGIALAMVAAARGYKLILTMPETMSIERRKLLKAYGAELVLTPGAEGMKGA 118

Query: 132 VQKAEEILAKTPNAY-MLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTIT 190
           + KAEEI A TPN+Y MLQQFENPANP+IH +TTGPE+W+ + G++DA V+G+GTGGTIT
Sbjct: 119 IAKAEEIAASTPNSYFMLQQFENPANPEIHRKTTGPEIWRDTDGKLDAFVAGVGTGGTIT 178

Query: 191 GAGKFLKEKNPNIKV 205
           G G+ LKE+ PNIK+
Sbjct: 179 GVGEVLKEQKPNIKI 193

This model distinguishes cysteine synthase A (CysK) from cysteine synthase B (CysM). CysM differs in having a broader specificity that also allows the use of thiosulfate to produce cysteine thiosulfonate [Amino acid biosynthesis, Serine family]. Length = 298

>gnl|CDD|178587 PLN03013, PLN03013, cysteine synthase

 Score =  309 bits (793), Expect = e-105
 Identities = 150/199 (75%), Positives = 179/199 (89%)

Query: 7   NIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLI 66
           NIA +V++LIG TP+VYLN+I  GCVA IAAKLE+MEPC SVKDRIGYSM++DAE KG I
Sbjct: 112 NIADNVSQLIGKTPMVYLNSIAKGCVANIAAKLEIMEPCCSVKDRIGYSMVTDAEQKGFI 171

Query: 67  TPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAK 126
           +PG+SVL+EPTSGNTGIGLAF+AA++ YRLI+TMPASMS+ERR++L+AFGAELVLTDPAK
Sbjct: 172 SPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVLTDPAK 231

Query: 127 GMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTG 186
           GM GAVQKAEEIL  TP+AYMLQQF+NPANPKIHYETTGPE+W  + G++D  V+GIGTG
Sbjct: 232 GMTGAVQKAEEILKNTPDAYMLQQFDNPANPKIHYETTGPEIWDDTKGKVDIFVAGIGTG 291

Query: 187 GTITGAGKFLKEKNPNIKV 205
           GTITG G+F+KEKNP  +V
Sbjct: 292 GTITGVGRFIKEKNPKTQV 310

Length = 429

>gnl|CDD|107204 cd01561, CBS_like, CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase

 Score =  304 bits (780), Expect = e-105
 Identities = 117/191 (61%), Positives = 145/191 (75%), Gaps = 3/191 (1%)

Query: 17  GNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEP 76
           GNTPLV LN +  G  A I AKLE   P  SVKDRI   MI DAE +GL+ PG + +IEP
Sbjct: 1   GNTPLVRLNRLSPGTGAEIYAKLEFFNPGGSVKDRIALYMIEDAEKRGLLKPG-TTIIEP 59

Query: 77  TSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAK--GMKGAVQK 134
           TSGNTGIGLA +AAAK YR II MP +MS E+R +LRA GAE++LT  A+  GMKGA+ K
Sbjct: 60  TSGNTGIGLAMVAAAKGYRFIIVMPETMSEEKRKLLRALGAEVILTPEAEADGMKGAIAK 119

Query: 135 AEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITGAGK 194
           A E+ A+TPNA+ L QFENPANP+ HYETT PE+W+   G++DA V+G+GTGGTITG  +
Sbjct: 120 ARELAAETPNAFWLNQFENPANPEAHYETTAPEIWEQLDGKVDAFVAGVGTGGTITGVAR 179

Query: 195 FLKEKNPNIKV 205
           +LKEKNPN+++
Sbjct: 180 YLKEKNPNVRI 190

CBS is a unique heme-containing enzyme that catalyzes a pyridoxal 5'-phosphate (PLP)-dependent condensation of serine and homocysteine to give cystathionine. Deficiency of CBS leads to homocystinuria, an inherited disease of sulfur metabolism characterized by increased levels of the toxic metabolite homocysteine. Cysteine synthase on the other hand catalyzes the last step of cysteine biosynthesis. This subgroup also includes an O-Phosphoserine sulfhydrylase found in hyperthermophilic archaea which produces L-cysteine from sulfide and the more thermostable O-phospho-L-serine. Length = 291

>gnl|CDD|223110 COG0031, CysK, Cysteine synthase [Amino acid transport and metabolism]

 Score =  293 bits (753), Expect = e-101
 Identities = 115/200 (57%), Positives = 148/200 (74%), Gaps = 3/200 (1%)

Query: 8   IAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLIT 67
           I + + +LIGNTPLV LN +  G    I AKLE   P  SVKDRI   MI DAE +GL+ 
Sbjct: 1   IYESILDLIGNTPLVRLNRLSPGTGVEIYAKLESFNPGGSVKDRIALYMIEDAEKRGLLK 60

Query: 68  PGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKG 127
           PG   ++E TSGNTGI LA +AAAK YRLII MP +MS ERR +LRA GAE++LT  A G
Sbjct: 61  PG-GTIVEATSGNTGIALAMVAAAKGYRLIIVMPETMSQERRKLLRALGAEVILTPGAPG 119

Query: 128 -MKGAVQKAEEILAKTPN-AYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGT 185
            MKGA+++A+E+ A+ P  A  L QFENPANP+ HYETTGPE+W+ + G++DA V+G+GT
Sbjct: 120 NMKGAIERAKELAAEIPGYAVWLNQFENPANPEAHYETTGPEIWQQTDGKVDAFVAGVGT 179

Query: 186 GGTITGAGKFLKEKNPNIKV 205
           GGTITG  ++LKE+NPN+++
Sbjct: 180 GGTITGVARYLKERNPNVRI 199

Length = 300

>gnl|CDD|178171 PLN02556, PLN02556, cysteine synthase/L-3-cyanoalanine synthase

 Score =  292 bits (749), Expect = 1e-99
 Identities = 125/201 (62%), Positives = 158/201 (78%)

Query: 5   SSNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKG 64
            + I  D ++LIG TPLVYLN +  GC A IAAK EM +P SS+KDR   +MI DAE K 
Sbjct: 46  GTKIKTDASQLIGKTPLVYLNKVTEGCGAYIAAKQEMFQPTSSIKDRPALAMIEDAEKKN 105

Query: 65  LITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDP 124
           LITPG++ LIEPTSGN GI LAFMAA K Y++I+TMP+  SLERR+ +RAFGAELVLTDP
Sbjct: 106 LITPGKTTLIEPTSGNMGISLAFMAAMKGYKMILTMPSYTSLERRVTMRAFGAELVLTDP 165

Query: 125 AKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIG 184
            KGM G V+KA E+L  TP+A+MLQQF NPAN ++H+ETTGPE+W+ + G++D  V GIG
Sbjct: 166 TKGMGGTVKKAYELLESTPDAFMLQQFSNPANTQVHFETTGPEIWEDTLGQVDIFVMGIG 225

Query: 185 TGGTITGAGKFLKEKNPNIKV 205
           +GGT++G GK+LK KNPN+K+
Sbjct: 226 SGGTVSGVGKYLKSKNPNVKI 246

Length = 368

>gnl|CDD|182672 PRK10717, PRK10717, cysteine synthase A; Provisional

 Score =  252 bits (645), Expect = 3e-84
 Identities = 99/209 (47%), Positives = 137/209 (65%), Gaps = 12/209 (5%)

Query: 6   SNIAKDVTELIGNTPLVYLNNIVN--GCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAK 63
             I +DV++ IGNTPL+ LN      GC   I  K E + P  SVKDR   ++I DAE +
Sbjct: 1   MKIFEDVSDTIGNTPLIRLNRASEATGC--EILGKAEFLNPGGSVKDRAALNIIWDAEKR 58

Query: 64  GLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLT- 122
           GL+ PG   ++E T+GNTGIGLA +AAA+ Y+ +I MP + S E++ +LRA GAELVL  
Sbjct: 59  GLLKPG-GTIVEGTAGNTGIGLALVAAARGYKTVIVMPETQSQEKKDLLRALGAELVLVP 117

Query: 123 -----DPAKGMKGAVQKAEEILAKTPN-AYMLQQFENPANPKIHYETTGPELWKGSGGRI 176
                +P   +KGA + AEE++A  PN A    QF+NPAN + HYETTGPE+W+ + G++
Sbjct: 118 AAPYANPNNYVKGAGRLAEELVASEPNGAIWANQFDNPANREAHYETTGPEIWEQTDGKV 177

Query: 177 DALVSGIGTGGTITGAGKFLKEKNPNIKV 205
           D  V  +GTGGT+ G  ++LKE NP +K+
Sbjct: 178 DGFVCAVGTGGTLAGVSRYLKETNPKVKI 206

Length = 330

>gnl|CDD|236972 PRK11761, cysM, cysteine synthase B; Provisional

 Score =  231 bits (592), Expect = 1e-76
 Identities = 97/192 (50%), Positives = 124/192 (64%), Gaps = 2/192 (1%)

Query: 14  ELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVL 73
           + IGNTPLV L  +       I AKLE   P  SVKDR   SMI  AE +G I PG+  L
Sbjct: 8   DTIGNTPLVKLQRLPPDRGNTILAKLEGNNPAGSVKDRPALSMIVQAEKRGEIKPGD-TL 66

Query: 74  IEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQ 133
           IE TSGNTGI LA +AA K YR+ + MP +MS ERR  +RA+GAEL+L    +GM+GA  
Sbjct: 67  IEATSGNTGIALAMIAAIKGYRMKLIMPENMSQERRAAMRAYGAELILVPKEQGMEGARD 126

Query: 134 KAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITGAG 193
            A ++ A+     +L QF NP NP  HYETTGPE+W+ + GRI   VS +GT GTI G  
Sbjct: 127 LALQMQAEG-EGKVLDQFANPDNPLAHYETTGPEIWRQTEGRITHFVSSMGTTGTIMGVS 185

Query: 194 KFLKEKNPNIKV 205
           ++LKE+NP +++
Sbjct: 186 RYLKEQNPAVQI 197

Length = 296

>gnl|CDD|233287 TIGR01137, cysta_beta, cystathionine beta-synthase

 Score =  216 bits (552), Expect = 1e-68
 Identities = 94/201 (46%), Positives = 128/201 (63%), Gaps = 4/201 (1%)

Query: 8   IAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLIT 67
           I  ++ +LIGNTPLV LN +  G    + AK E   P  SVKDRI   MI DAEA G + 
Sbjct: 1   IRDNIIDLIGNTPLVRLNKVSKGIKCELLAKCEFFNPGGSVKDRIALRMIEDAEASGRLK 60

Query: 68  PGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKG 127
           PG   +IEPTSGNTGIGLA +AA K Y+ II +P  MS E+  +L+A GAE+V T  A  
Sbjct: 61  PG-DTIIEPTSGNTGIGLALVAAIKGYKCIIVLPEKMSNEKVDVLKALGAEIVRTPTAAA 119

Query: 128 M---KGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIG 184
               +  +  A+ ++ + P A++L Q+ NP+NP  HY+ TGPE+ +   G++D  V+G G
Sbjct: 120 FDSPESHIGVAKRLVREIPGAHILDQYNNPSNPLAHYDGTGPEILEQCEGKLDMFVAGAG 179

Query: 185 TGGTITGAGKFLKEKNPNIKV 205
           TGGTITG  ++LKE NP  ++
Sbjct: 180 TGGTITGIARYLKESNPKCRI 200

Members of this family closely resemble cysteine synthase but contain an additional C-terminal CBS domain. The function of any bacterial member included in this family is proposed but not proven [Amino acid biosynthesis, Serine family]. Length = 454

>gnl|CDD|130208 TIGR01138, cysM, cysteine synthase B

 Score =  210 bits (535), Expect = 3e-68
 Identities = 94/194 (48%), Positives = 125/194 (64%), Gaps = 2/194 (1%)

Query: 12  VTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGES 71
           + + +GNTPLV L  +     + +  KLE   P  SVKDR   SMI +AE +G I PG+ 
Sbjct: 2   IEQTVGNTPLVRLQRMGPENGSEVWLKLEGNNPAGSVKDRPALSMIVEAEKRGEIKPGD- 60

Query: 72  VLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGA 131
           VLIE TSGNTGI LA +AA K YR+ + MP +MS ER+  +RA+GAEL+L    +GM+GA
Sbjct: 61  VLIEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERKAAMRAYGAELILVTKEEGMEGA 120

Query: 132 VQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITG 191
              A E+  +      L QF NP NP  HY +TGPE+W+ +GGRI   VS +GT GTI G
Sbjct: 121 RDLALELANRGEGKL-LDQFNNPDNPYAHYTSTGPEIWQQTGGRITHFVSSMGTTGTIMG 179

Query: 192 AGKFLKEKNPNIKV 205
             +FLKE+NP +++
Sbjct: 180 VSRFLKEQNPPVQI 193

CysM differs from CysK in that it can also use thiosulfate instead of sulfide, to produce cysteine thiosulfonate instead of cysteine. Alternate name: O-acetylserine (thiol)-lyase [Amino acid biosynthesis, Serine family]. Length = 290

>gnl|CDD|107202 cd00640, Trp-synth-beta_II, Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP)-dependent enzymes catalyzes beta-replacement and beta-elimination reactions

 Score =  192 bits (491), Expect = 5e-62
 Identities = 77/188 (40%), Positives = 101/188 (53%), Gaps = 6/188 (3%)

Query: 19  TPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTS 78
           TPLV L  +     A I  KLE + P  S KDR   ++I  AE +G +  G  V+IE T 
Sbjct: 1   TPLVRLKRLSKLGGANIYLKLEFLNPTGSFKDRGALNLILLAEEEGKLPKG--VIIESTG 58

Query: 79  GNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEI 138
           GNTGI LA  AA    +  I MP   S E+   +RA GAE+VL         A+  A+E+
Sbjct: 59  GNTGIALAAAAARLGLKCTIVMPEGASPEKVAQMRALGAEVVLVPG--DFDDAIALAKEL 116

Query: 139 LAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGG-RIDALVSGIGTGGTITGAGKFLK 197
             + P AY + QF+NPAN      T G E+ +  GG + DA+V  +G GG I G  + LK
Sbjct: 117 AEEDPGAYYVNQFDNPANIAGQG-TIGLEILEQLGGQKPDAVVVPVGGGGNIAGIARALK 175

Query: 198 EKNPNIKV 205
           E  PN+KV
Sbjct: 176 ELLPNVKV 183

This CD corresponds to aminocyclopropane-1-carboxylate deaminase (ACCD), tryptophan synthase beta chain (Trp-synth_B), cystathionine beta-synthase (CBS), O-acetylserine sulfhydrylase (CS), serine dehydratase (Ser-dehyd), threonine dehydratase (Thr-dehyd), diaminopropionate ammonia lyase (DAL), and threonine synthase (Thr-synth). ACCD catalyzes the conversion of 1-aminocyclopropane-1-carboxylate to alpha-ketobutyrate and ammonia. Tryptophan synthase folds into a tetramer, where the beta chain is the catalytic PLP-binding subunit and catalyzes the formation of L-tryptophan from indole and L-serine. CBS is a tetrameric hemeprotein that catalyzes condensation of serine and homocysteine to cystathionine. CS is a homodimer that catalyzes the formation of L-cysteine from O-acetyl-L-serine. Ser-dehyd catalyzes the conversion of L- or D-serine to pyruvate and ammonia. Thr-dehyd is active as a homodimer and catalyzes the conversion of L-threonine to 2-oxobutanoate and ammonia. DAL is also a homodimer and catalyzes the alpha, beta-elimination reaction of both L- and D-alpha, beta-diaminopropionate to form pyruvate and ammonia. Thr-synth catalyzes the formation of threonine and inorganic phosphate from O-phosphohomoserine. Length = 244

>gnl|CDD|234409 TIGR03945, PLP_SbnA_fam, 2,3-diaminopropionate biosynthesis protein SbnA

 Score =  173 bits (442), Expect = 6e-54
 Identities = 77/198 (38%), Positives = 110/198 (55%), Gaps = 6/198 (3%)

Query: 12  VTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGES 71
           +  LIGNTPLV L  +      R+ AKLE   P  S+KDR    ++  A  +G ITPG +
Sbjct: 1   ILSLIGNTPLVKLERLFPDAPFRLFAKLEGFNPGGSIKDRPALYILEAAIKRGRITPG-T 59

Query: 72  VLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLT---DPAKGM 128
            +IE +SGN GI LA + A K  R I  +  ++S +   +LRA+GAE+      D   G 
Sbjct: 60  TIIESSSGNLGIALAMICAYKGLRFICVVDPNISPQNLKLLRAYGAEVEKVTEPDETGGY 119

Query: 129 KGA-VQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGG 187
            G  + +  E+LA  P+AY   Q+ NP NP+ HY  TG E+ + +   +D L  G+ T G
Sbjct: 120 LGTRIARVRELLASIPDAYWPNQYANPDNPRAHYHGTGREIAR-AFPPLDYLFVGVSTTG 178

Query: 188 TITGAGKFLKEKNPNIKV 205
           T+ G  + L+E+ PN KV
Sbjct: 179 TLMGCSRRLRERGPNTKV 196

Members of this family include SbnA, a protein of the staphyloferrin B biosynthesis operon of Staphylococcus aureus. SbnA and SbnB together appear to synthesize 2,3-diaminopropionate, a precursor of certain siderophores and other secondary metabolites. SbnA is a pyridoxal phosphate-dependent enzyme [Cellular processes, Biosynthesis of natural products]. Length = 304

>gnl|CDD|215840 pfam00291, PALP, Pyridoxal-phosphate dependent enzyme

 Score =  151 bits (384), Expect = 2e-45
 Identities = 65/198 (32%), Positives = 98/198 (49%), Gaps = 13/198 (6%)

Query: 12  VTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGES 71
           ++  IG TPLV L + + G   R+  KLE + P  S KDR    ++  A  +G      +
Sbjct: 1   ISLGIGPTPLVRLPSPLLGA--RVYLKLESLNPTGSFKDRGAAYLLLRALERG------A 52

Query: 72  VLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVL---TDPAKGM 128
            ++E +SGNTG  LA  AA    ++ I +P   S  + +++RA GAE++L          
Sbjct: 53  TVVEASSGNTGRALAAAAARLGLKVTIVVPEGASPGKLLLMRALGAEVILVVSEGDYDDA 112

Query: 129 KGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWK-GSGGRIDALVSGIGTGG 187
               ++A E+LA       L Q+ NP N    Y+T G E+ +    G  DA+V  +G GG
Sbjct: 113 LELAEEAAELLAAYDGPIPLGQYNNP-NVIAGYKTIGLEILEQLGQGDPDAVVVPVGGGG 171

Query: 188 TITGAGKFLKEKNPNIKV 205
              G  + LKE  P I+V
Sbjct: 172 LAAGIARGLKELGPGIRV 189

Members of this family are all pyridoxal-phosphate dependent enzymes. This family includes: serine dehydratase EC:4.2.1.13 P20132, threonine dehydratase EC:4.2.1.16, tryptophan synthase beta chain EC:4.2.1.20, threonine synthase EC:4.2.99.2, cysteine synthase EC:4.2.99.8 P11096, cystathionine beta-synthase EC:4.2.1.22, 1-aminocyclopropane-1-carboxylate deaminase EC:4.1.99.4. Length = 295

>gnl|CDD|215204 PLN02356, PLN02356, phosphateglycerate kinase

 Score =  118 bits (297), Expect = 1e-31
 Identities = 74/232 (31%), Positives = 109/232 (46%), Gaps = 42/232 (18%)

Query: 14  ELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVL 73
           + IGNTPL+ +N++       I  K E + P  SVKDR+   +I +A   G + PG  V+
Sbjct: 49  DAIGNTPLIRINSLSEATGCEILGKCEFLNPGGSVKDRVAVKIIEEALESGQLFPG-GVV 107

Query: 74  IEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDP--------- 124
            E ++G+T I LA +A A   +  + +P  +++E+  IL A GA +    P         
Sbjct: 108 TEGSAGSTAISLATVAPAYGCKCHVVIPDDVAIEKSQILEALGATVERVRPVSITHKDHY 167

Query: 125 ----------AKGMKGAVQKAEEILAK----------------------TPNAYMLQQFE 152
                     A  +    +K  E                              +   QFE
Sbjct: 168 VNIARRRALEANELASKRRKGSETDGIHLEKTNGCISEEEKENSLFSSSCTGGFFADQFE 227

Query: 153 NPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIK 204
           N AN + HYE TGPE+W+ + G +DA V+  GTGGT+ G  +FL+EKNPNIK
Sbjct: 228 NLANFRAHYEGTGPEIWEQTQGNLDAFVAAAGTGGTLAGVSRFLQEKNPNIK 279

Length = 423

>gnl|CDD|224092 COG1171, IlvA, Threonine dehydratase [Amino acid transport and metabolism]

 Score = 69.2 bits (170), Expect = 5e-14
 Identities = 54/198 (27%), Positives = 83/198 (41%), Gaps = 29/198 (14%)

Query: 19  TPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMIS-----DAEAKGLITPGESVL 73
           TPL    ++     A I  K E ++P  S K R  Y+ +S     +  A G+I       
Sbjct: 26  TPLQRSPSLSERLGAEIYLKRENLQPVGSFKIRGAYNKLSSLSEEEERAAGVIAA----- 80

Query: 74  IEPTSGNTGIGLAFMAAAKQY--RLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGA 131
              ++GN   G+A+  AAK+   +  I MP +    +    R +GAE++L         A
Sbjct: 81  ---SAGNHAQGVAY--AAKRLGIKATIVMPETTPKIKVDATRGYGAEVILHGDNF--DDA 133

Query: 132 VQKAEEILAKTPNAYMLQQFENPANPKIH----YETTGPELWKGSGGRIDALVSGIGTGG 187
              AEE LA+      +  F++P            T   E+ +      DA+   +G GG
Sbjct: 134 YAAAEE-LAEEEGLTFVPPFDDP-----DVIAGQGTIALEILEQLPDLPDAVFVPVGGGG 187

Query: 188 TITGAGKFLKEKNPNIKV 205
            I+G    LK  +P IKV
Sbjct: 188 LISGIATALKALSPEIKV 205

Length = 347

>gnl|CDD|107205 cd01562, Thr-dehyd, Threonine dehydratase: The first step in amino acid degradation is the removal of nitrogen

 Score = 62.9 bits (154), Expect = 6e-12
 Identities = 50/201 (24%), Positives = 79/201 (39%), Gaps = 37/201 (18%)

Query: 19  TPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMIS----DAEAKGLITPGESVLI 74
           TPL+    +     A +  K E ++   S K R  Y+ +     +  AKG++        
Sbjct: 18  TPLLTSPTLSELLGAEVYLKCENLQKTGSFKIRGAYNKLLSLSEEERAKGVVAA------ 71

Query: 75  EPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQK 134
             ++GN   G+A+ A        I MP +    +    RA+GAE+VL         A  K
Sbjct: 72  --SAGNHAQGVAYAAKLLGIPATIVMPETAPAAKVDATRAYGAEVVLYGE--DFDEAEAK 127

Query: 135 AEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSG----------GRIDALVSGIG 184
           A E LA+      +  F++P            ++  G G            +DA+   +G
Sbjct: 128 ARE-LAEEEGLTFIHPFDDP------------DVIAGQGTIGLEILEQVPDLDAVFVPVG 174

Query: 185 TGGTITGAGKFLKEKNPNIKV 205
            GG I G    +K  +PN KV
Sbjct: 175 GGGLIAGIATAVKALSPNTKV 195

Although the nitrogen atoms of most amino acids are transferred to alpha-ketoglutarate before removal, the alpha-amino group of threonine can be directly converted into NH4+. The direct deamination is catalyzed by threonine dehydratase, in which pyridoxal phosphate (PLP) is the prosthetic group. Threonine dehydratase is widely distributed in all three major phylogenetic divisions. Length = 304

>gnl|CDD|107206 cd01563, Thr-synth_1, Threonine synthase is a pyridoxal phosphate (PLP) dependent enzyme that catalyses the last reaction in the synthesis of threonine from aspartate

 Score = 57.6 bits (140), Expect = 5e-10
 Identities = 49/186 (26%), Positives = 78/186 (41%), Gaps = 16/186 (8%)

Query: 17  GNTPLVYLNNIVN-GCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIE 75
           GNTPLV    +        +  K E + P  S KDR     +S A+  G        +  
Sbjct: 21  GNTPLVRAPRLGERLGGKNLYVKDEGLNPTGSFKDRGMTVAVSKAKELG-----VKAVAC 75

Query: 76  PTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKA 135
            ++GNT   LA  AA    + ++ +PA  +L +     A+GA ++     +G      + 
Sbjct: 76  ASTGNTSASLAAYAARAGIKCVVFLPAGKALGKLAQALAYGATVL---AVEGNFDDALRL 132

Query: 136 EEILAKTPNAYMLQQFENPANP-KIH-YETTGPELWKGSGGRI-DALVSGIGTGGTITGA 192
              LA+    Y+     N  NP ++   +T   E+ +  G  + D +V  +G GG IT  
Sbjct: 133 VRELAEENWIYLS----NSLNPYRLEGQKTIAFEIAEQLGWEVPDYVVVPVGNGGNITAI 188

Query: 193 GKFLKE 198
            K  KE
Sbjct: 189 WKGFKE 194

It proceeds by converting O-phospho-L-homoserine (OPH) into threonine and inorganic phosphate. In plants, OPH is an intermediate between the methionine and threonine/isoleucine pathways. Thus threonine synthase competes for OPH with cystathionine-gamma-synthase, the first enzyme in the methionine pathway. These enzymes are in general dimers. Members of this CD, Thr-synth_1, are widely distributed in bacteria, archaea and higher plants. Length = 324

>gnl|CDD|130194 TIGR01124, ilvA_2Cterm, threonine ammonia-lyase, biosynthetic, long form

 Score = 57.4 bits (139), Expect = 7e-10
 Identities = 51/183 (27%), Positives = 81/183 (44%), Gaps = 30/183 (16%)

Query: 34  RIAAKLEMMEPCSSVKDRIGYSMIS----DAEAKGLITPGESVLIEPTSGNTGIGLAFMA 89
           RI  K E ++P  S K R  Y+ ++    + +A+G+I          ++GN   G+AF A
Sbjct: 33  RILIKREDLQPVFSFKLRGAYNKMAQLSPEQKARGVIAA--------SAGNHAQGVAFSA 84

Query: 90  AAKQYRLIITMPASMSLERRIILRAFGAELVLT----DPAKGMKGAVQKAEEILAKTPNA 145
           A    + +I MP +    +   +R FG E+VL     D AK       KA E L++    
Sbjct: 85  ARLGLKALIVMPETTPDIKVDAVRGFGGEVVLHGANFDDAKA------KAIE-LSQEKGL 137

Query: 146 YMLQQFENP---ANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPN 202
             +  F++P   A       T   E+ +     +DA+   +G GG   G    +K+  P 
Sbjct: 138 TFIHPFDDPLVIAGQG----TLALEILRQVANPLDAVFVPVGGGGLAAGVAALIKQLMPE 193

Query: 203 IKV 205
           IKV
Sbjct: 194 IKV 196

This model describes a form of threonine ammonia-lyase, a pyridoxal-phosphate dependent enzyme, with two copies of the threonine dehydratase C-terminal domain (pfam00585). Members with known function participate in isoleucine biosynthesis and are inhibited by isoleucine. Alternate name: threonine deaminase, threonine dehydratase. Forms scoring between the trusted and noise cutoff tend to branch with this subgroup of threonine ammonia-lyase phylogenetically but have only a single copy of the C-terminal domain [Amino acid biosynthesis, Pyruvate family]. Length = 499

>gnl|CDD|130197 TIGR01127, ilvA_1Cterm, threonine ammonia-lyase, medium form

 Score = 50.1 bits (120), Expect = 2e-07
 Identities = 42/195 (21%), Positives = 78/195 (40%), Gaps = 25/195 (12%)

Query: 19  TPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTS 78
           TPL+Y   + +   + +  KLE ++   S K R   + I++          +  ++  ++
Sbjct: 1   TPLIYSTTLSDITGSEVYLKLENLQKTGSFKIRGALNKIANLSEDQ----RQRGVVAASA 56

Query: 79  GNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAV----QK 134
           GN   G+A+ A     + +I MP S    +    +++GAE++L        G        
Sbjct: 57  GNHAQGVAYAAKKFGIKAVIVMPESAPPSKVKATKSYGAEVIL-------HGDDYDEAYA 109

Query: 135 AEEILAKTPNAYMLQQFENP----ANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTIT 190
               LA+      +  F++         I  E             +D ++  +G GG I+
Sbjct: 110 FATSLAEEEGRVFVHPFDDEFVMAGQGTIGLEIME------DIPDVDTVIVPVGGGGLIS 163

Query: 191 GAGKFLKEKNPNIKV 205
           G     K+ NPN+KV
Sbjct: 164 GVASAAKQINPNVKV 178

A form of threonine dehydratase with two copies of the C-terminal domain pfam00585 is described by TIGR01124. This model describes a phylogenetically distinct form with a single copy of pfam00585. This form branches with the catabolic threonine dehydratase of E. coli; many members are designated as catabolic for this reason. However, the catabolic form lacks any pfam00585 domain. Many members of this model are found in species with other Ile biosynthetic enzymes [Amino acid biosynthesis, Pyruvate family]. Length = 380

>gnl|CDD|233712 TIGR02079, THD1, threonine dehydratase

 Score = 47.1 bits (112), Expect = 2e-06
 Identities = 43/201 (21%), Positives = 78/201 (38%), Gaps = 13/201 (6%)

Query: 9   AKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITP 68
            K + E++ +TPL     +     A I  K E ++P  S K R  Y+ +       L   
Sbjct: 7   RKRLKEVVPHTPLQLNERLSEKYGANIYLKREDLQPVRSYKIRGAYNFLKQLSDAQL--- 63

Query: 69  GESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAE---LVLTDPA 125
               ++  ++GN   G A+          + MPA+   ++   ++ FG E   ++L    
Sbjct: 64  -AKGVVCASAGNHAQGFAYACRHLGVHGTVFMPATTPKQKIDRVKIFGGEFIEIILV--G 120

Query: 126 KGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYE-TTGPELWKGSGGRIDALVSGIG 184
                    A E +        +  F++P    I  + T   E+      + D +V  +G
Sbjct: 121 DTFDQCAAAAREHVEDH-GGTFIPPFDDPR--IIEGQGTVAAEILDQLPEKPDYVVVPVG 177

Query: 185 TGGTITGAGKFLKEKNPNIKV 205
            GG I+G   +L   +P  K+
Sbjct: 178 GGGLISGLTTYLAGTSPKTKI 198

This model represents threonine dehydratase, the first step in the pathway converting threonine into isoleucine. At least two other clades of biosynthetic threonine dehydratases have been charcterized (TIGR01124 and TIGR01127). Those sequences described by this model are exclusively found in species containg the rest of the isoleucine pathway and which are generally lacking in members of the those other two clades of threonine dehydratases. Members of this clade are also often gene clustered with other elements of the isoleucine pathway [Amino acid biosynthesis, Pyruvate family]. Length = 409

>gnl|CDD|237111 PRK12483, PRK12483, threonine dehydratase; Reviewed

 Score = 46.7 bits (111), Expect = 3e-06
 Identities = 47/178 (26%), Positives = 81/178 (45%), Gaps = 20/178 (11%)

Query: 34  RIAAKLEMMEPCSSVKDRIGYSMIS----DAEAKGLITPGESVLIEPTSGNTGIGLAFMA 89
           ++  K E ++P  S K R  Y+ ++    +  A+G+IT         ++GN   G+A  A
Sbjct: 53  QVLLKREDLQPVFSFKIRGAYNKMARLPAEQLARGVITA--------SAGNHAQGVALAA 104

Query: 90  AAKQYRLIITMPASMSLERRIILRAFGAELVLTDPA--KGMKGAVQKAEEILAKTPNAYM 147
           A    + +I MP +    +   +RA G E+VL   +    +  A++ AEE          
Sbjct: 105 ARLGVKAVIVMPRTTPQLKVDGVRAHGGEVVLHGESFPDALAHALKLAEE-----EGLTF 159

Query: 148 LQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKV 205
           +  F++P +      T   E+ +   G +DA+   +G GG I G   ++K   P IKV
Sbjct: 160 VPPFDDP-DVIAGQGTVAMEILRQHPGPLDAIFVPVGGGGLIAGIAAYVKYVRPEIKV 216

Length = 521

>gnl|CDD|223572 COG0498, ThrC, Threonine synthase [Amino acid transport and metabolism]

 Score = 46.2 bits (110), Expect = 4e-06
 Identities = 32/146 (21%), Positives = 52/146 (35%), Gaps = 17/146 (11%)

Query: 17  GNTPLVYLNNIVNG---CVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVL 73
           G TPL     +          +  K     P  S KDR    ++S A+  G  T     +
Sbjct: 75  GGTPLYKAPALAAPLGVLNDNLYVKELGHNPTGSFKDRGMTVLVSLAKELGAKT-----I 129

Query: 74  IEPTSGNTGIGLAFMAAAKQYRLIITMPAS-MSLERRIILRAFGAELVLTDPAKGMKGAV 132
           +  +SGNTG   A  AA    ++ +  P   +S  +   +   GA ++      G     
Sbjct: 130 LCASSGNTGASAAAYAARAGLKVFVLYPKGKVSPGKLAQMLTLGAHVI---AVDGNFDDA 186

Query: 133 QK-AEEILAKTPNAYMLQQFENPANP 157
           Q+  +E   +      +    N  NP
Sbjct: 187 QELVKEAANREGLLSAV----NSINP 208

Length = 411

>gnl|CDD|236417 PRK09224, PRK09224, threonine dehydratase; Reviewed

 Score = 43.2 bits (103), Expect = 4e-05
 Identities = 53/196 (27%), Positives = 86/196 (43%), Gaps = 26/196 (13%)

Query: 19  TPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMIS----DAEAKGLITPGESVLI 74
           TPL     +      ++  K E ++P  S K R  Y+ ++    +  A+G+IT       
Sbjct: 21  TPLEKAPKLSARLGNQVLLKREDLQPVFSFKLRGAYNKMAQLTEEQLARGVITA------ 74

Query: 75  EPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLT----DPAKGMKG 130
             ++GN   G+A  AA    + +I MP +    +   +RAFG E+VL     D A     
Sbjct: 75  --SAGNHAQGVALSAARLGIKAVIVMPVTTPDIKVDAVRAFGGEVVLHGDSFDEAY---- 128

Query: 131 AVQKAEEILAKTPNAYMLQQFENPANPKIHYE-TTGPELWKGSGGRIDALVSGIGTGGTI 189
               A E LA+      +  F++P    I  + T   E+ +     +DA+   +G GG I
Sbjct: 129 --AHAIE-LAEEEGLTFIHPFDDPD--VIAGQGTIAMEILQQHPHPLDAVFVPVGGGGLI 183

Query: 190 TGAGKFLKEKNPNIKV 205
            G   ++K+  P IKV
Sbjct: 184 AGVAAYIKQLRPEIKV 199

Length = 504

>gnl|CDD|180550 PRK06382, PRK06382, threonine dehydratase; Provisional

 Score = 42.2 bits (99), Expect = 8e-05
 Identities = 49/194 (25%), Positives = 86/194 (44%), Gaps = 17/194 (8%)

Query: 16  IGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDR---IGYSMISDAEAK-GLITPGES 71
           +  TPL++     +     I  KLE  +   S K R     +S +S+ E + G+IT    
Sbjct: 23  LNRTPLIHSTTFGDEYGGDIYFKLENFQKTGSFKSRGAVFKFSKLSEDELRNGVITA--- 79

Query: 72  VLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGA 131
                ++GN   G+A+ A+       I MP     ++   + A+GA ++LT   +    A
Sbjct: 80  -----SAGNHAQGVAYAASINGIDAKIVMPEYTIPQKVNAVEAYGAHVILT--GRDYDEA 132

Query: 132 VQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITG 191
            + A++I A   N   ++ F +         T G E+ +     +D ++  +G GG I+G
Sbjct: 133 HRYADKI-AMDENRTFIEAFNDRWVISGQ-GTIGLEIMEDLPD-LDQIIVPVGGGGLISG 189

Query: 192 AGKFLKEKNPNIKV 205
                K  NPN+K+
Sbjct: 190 IALAAKHINPNVKI 203

Length = 406

>gnl|CDD|235789 PRK06381, PRK06381, threonine synthase; Validated

 Score = 41.6 bits (98), Expect = 1e-04
 Identities = 51/188 (27%), Positives = 76/188 (40%), Gaps = 32/188 (17%)

Query: 17  GNTPLV---YLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGL--ITPGES 71
           G TPL+    L   +   + +I  K E   P  + KDRI  + +  A   G   IT G  
Sbjct: 14  GGTPLLRARKLEEELG--LRKIYLKFEGANPTGTQKDRIAEAHVRRAMRLGYSGITVG-- 69

Query: 72  VLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGA 131
                T GN G  +A+ A     + +I +P S S  R   +  +GAE++  D      G 
Sbjct: 70  -----TCGNYGASIAYFARLYGLKAVIFIPRSYSNSRVKEMEKYGAEIIYVD------GK 118

Query: 132 VQKAEE---ILAKTPNAYMLQQFENP--ANPKIHYETTGP---ELWKGSGGRIDALVSGI 183
            ++A E     AK    Y      NP   N  +  E       E+++  G   DA+   +
Sbjct: 119 YEEAVERSRKFAKENGIYD----ANPGSVNSVVDIEAYSAIAYEIYEALGDVPDAVAVPV 174

Query: 184 GTGGTITG 191
           G G T+ G
Sbjct: 175 GNGTTLAG 182

Length = 319

>gnl|CDD|236317 PRK08638, PRK08638, threonine dehydratase; Validated

 Score = 41.3 bits (97), Expect = 2e-04
 Identities = 52/195 (26%), Positives = 77/195 (39%), Gaps = 25/195 (12%)

Query: 19  TPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMIS---DAE-AKGLITPGESVLI 74
           TPL   N +   C   I  KLE M+   S K R  ++ +S   DAE  KG++        
Sbjct: 28  TPLPRSNYLSERCKGEIFLKLENMQRTGSFKIRGAFNKLSSLTDAEKRKGVVAC------ 81

Query: 75  EPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQK 134
             ++GN   G+A   A       + MP      +      +GAE+VL          + K
Sbjct: 82  --SAGNHAQGVALSCALLGIDGKVVMPKGAPKSKVAATCGYGAEVVLH--GDNFNDTIAK 137

Query: 135 AEEILAKTPNAYMLQQFENP----ANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTIT 190
            EEI  +      +  +++P        I  E    +LW      +D ++  IG GG I 
Sbjct: 138 VEEI-VEEEGRTFIPPYDDPKVIAGQGTIGLEIL-EDLWD-----VDTVIVPIGGGGLIA 190

Query: 191 GAGKFLKEKNPNIKV 205
           G    LK  NP I +
Sbjct: 191 GIAVALKSINPTIHI 205

Length = 333

>gnl|CDD|180709 PRK06815, PRK06815, hypothetical protein; Provisional

 Score = 40.4 bits (95), Expect = 3e-04
 Identities = 44/180 (24%), Positives = 73/180 (40%), Gaps = 23/180 (12%)

Query: 33  ARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESV---LIEPTSGNTGIGLAFMA 89
             +  K E ++   S K R        A  K  +         +I  +SGN G G+A  A
Sbjct: 35  CEVYLKCEHLQHTGSFKFR-------GASNKLRLLNEAQRQQGVITASSGNHGQGVALAA 87

Query: 90  AAKQYRLIITMPASMSLERRIILRAFGAEL-VLTDPAKGMKGAVQKAEEILAKTPNAYML 148
                 + +  P   S  +   +RA GAE+ +    A   + A ++A E   K       
Sbjct: 88  KLAGIPVTVYAPEQASAIKLDAIRALGAEVRLYGGDALNAELAARRAAEQQGKV------ 141

Query: 149 QQFENPAN-PKI--HYETTGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKV 205
             + +P N P++     T G EL +     +DA+   +G GG I+G   +LK  +P  ++
Sbjct: 142 --YISPYNDPQVIAGQGTIGMELVE-QQPDLDAVFVAVGGGGLISGIATYLKTLSPKTEI 198

Length = 317

>gnl|CDD|235699 PRK06110, PRK06110, hypothetical protein; Provisional

 Score = 40.0 bits (94), Expect = 3e-04
 Identities = 19/53 (35%), Positives = 26/53 (49%)

Query: 68  PGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV 120
           P    +I  T GN G  +AF A        I +P   S+E+   +RA GAEL+
Sbjct: 68  PRVRGVISATRGNHGQSVAFAARRHGLAATIVVPHGNSVEKNAAMRALGAELI 120

Length = 322

>gnl|CDD|236244 PRK08329, PRK08329, threonine synthase; Validated

 Score = 39.4 bits (92), Expect = 7e-04
 Identities = 23/82 (28%), Positives = 45/82 (54%), Gaps = 5/82 (6%)

Query: 38  KLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLI 97
           KL+ ++P  S KDR  Y  ++  + +G+      V+I+ +SGN  + LA  + ++  ++ 
Sbjct: 77  KLDYLQPTGSFKDRGTYVTVAKLKEEGI----NEVVID-SSGNAALSLALYSLSEGIKVH 131

Query: 98  ITMPASMSLERRIILRAFGAEL 119
           + +  + S E+  +L   GAEL
Sbjct: 132 VFVSYNASKEKISLLSRLGAEL 153

Length = 347

>gnl|CDD|180565 PRK06450, PRK06450, threonine synthase; Validated

 Score = 39.3 bits (92), Expect = 7e-04
 Identities = 37/121 (30%), Positives = 56/121 (46%), Gaps = 16/121 (13%)

Query: 17  GNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEP 76
           G TPL+   NI          KL+ + P  S KDR   ++IS    KG+       + E 
Sbjct: 57  GRTPLIKKGNI--------WFKLDFLNPTGSYKDRGSVTLISYLAEKGI-----KQISED 103

Query: 77  TSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAE 136
           +SGN G  +A   AA    + I +P + S  +   + ++GAE+V     +G +  V KA 
Sbjct: 104 SSGNAGASIAAYGAAAGIEVKIFVPETASGGKLKQIESYGAEVV---RVRGSREDVAKAA 160

Query: 137 E 137
           E
Sbjct: 161 E 161

Length = 338

>gnl|CDD|136018 PRK06721, PRK06721, threonine synthase; Reviewed

 Score = 39.3 bits (91), Expect = 8e-04
 Identities = 42/145 (28%), Positives = 65/145 (44%), Gaps = 11/145 (7%)

Query: 11  DVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGE 70
           DV+ + GNTPL+ L NI      ++  K E   P  S KDR G  M + A+AK     G 
Sbjct: 21  DVSLMEGNTPLIPLLNISKQLGIQLYGKYEGANPTGSFKDR-GMVM-AVAKAKEE---GS 75

Query: 71  SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILR-AFGAELV-----LTDP 124
             +I  ++GNT    A  AA    + II +P       ++    A+GAE++       D 
Sbjct: 76  EAIICASTGNTSASAAAYAARLGMKCIIVIPEGKIAHGKLAQAVAYGAEIISIEGNFDDA 135

Query: 125 AKGMKGAVQKAEEILAKTPNAYMLQ 149
            K ++    +    L  + N Y ++
Sbjct: 136 LKAVRNIAAEEPITLVNSVNPYRIE 160

Length = 352

>gnl|CDD|234245 TIGR03528, 2_3_DAP_am_ly, diaminopropionate ammonia-lyase

 Score = 37.8 bits (88), Expect = 0.003
 Identities = 19/55 (34%), Positives = 29/55 (52%)

Query: 69  GESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTD 123
           G+   +  T GN G G+A+ A     + ++ MP   + ER   +RA GAE  +TD
Sbjct: 112 GDITFVTATDGNHGRGVAWAANQLGQKSVVYMPKGSAQERLENIRAEGAECTITD 166

Members of this protein family are the homodimeric, pyridoxal phosphate enzyme diaminopropionate ammonia-lyase, which adds water to remove two amino groups, leaving pyruvate. Length = 396

>gnl|CDD|236186 PRK08206, PRK08206, diaminopropionate ammonia-lyase; Provisional

 Score = 37.2 bits (87), Expect = 0.004
 Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 6/74 (8%)

Query: 52  IGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQY--RLIITMPASMSLERR 109
           + +  ++  E +  +  G+      T GN G G+A   AA+Q   + +I MP   S ER 
Sbjct: 100 LSFEELTSGEVREKL--GDITFATATDGNHGRGVA--WAAQQLGQKAVIYMPKGSSEERV 155

Query: 110 IILRAFGAELVLTD 123
             +RA GAE ++TD
Sbjct: 156 DAIRALGAECIITD 169

Length = 399

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	206
COG0031	300	CysK Cysteine synthase [Amino acid transport and m	100.0
PLN03013	429	cysteine synthase	100.0
PLN02565	322	cysteine synthase	100.0
PRK11761	296	cysM cysteine synthase B; Provisional	100.0
PLN02556	368	cysteine synthase/L-3-cyanoalanine synthase	100.0
PLN00011	323	cysteine synthase	100.0
COG1171	347	IlvA Threonine dehydratase [Amino acid transport a	100.0
TIGR01138	290	cysM cysteine synthase B. Alternate name: O-acetyl	100.0
TIGR01136	299	cysKM cysteine synthases. This model discriminates	100.0
TIGR01139	298	cysK cysteine synthase A. This model distinguishes	100.0
PRK10717	330	cysteine synthase A; Provisional	100.0
PRK07476	322	eutB threonine dehydratase; Provisional	100.0
PRK08526	403	threonine dehydratase; Provisional	100.0
PRK08198	404	threonine dehydratase; Provisional	100.0
PLN02970	328	serine racemase	100.0
PRK12483	521	threonine dehydratase; Reviewed	100.0
PLN02356	423	phosphateglycerate kinase	100.0
PRK06382	406	threonine dehydratase; Provisional	100.0
TIGR02991	317	ectoine_eutB ectoine utilization protein EutB. Mem	100.0
cd01561	291	CBS_like CBS_like: This subgroup includes Cystathi	100.0
TIGR01137	454	cysta_beta cystathionine beta-synthase. Members of	100.0
PRK07048	321	serine/threonine dehydratase; Validated	100.0
PRK06110	322	hypothetical protein; Provisional	100.0
PRK08638	333	threonine dehydratase; Validated	100.0
cd06447	404	D-Ser-dehyd D-Serine dehydratase is a pyridoxal ph	100.0
PLN02550	591	threonine dehydratase	100.0
KOG1252	362	consensus Cystathionine beta-synthase and related	100.0
TIGR01124	499	ilvA_2Cterm threonine ammonia-lyase, biosynthetic,	100.0
KOG1250	457	consensus Threonine/serine dehydratases [Amino aci	100.0
PRK08639	420	threonine dehydratase; Validated	100.0
PRK06608	338	threonine dehydratase; Provisional	100.0
TIGR02079	409	THD1 threonine dehydratase. This model represents	100.0
TIGR01127	380	ilvA_1Cterm threonine dehydratase, medium form. A	100.0
cd01562	304	Thr-dehyd Threonine dehydratase: The first step in	100.0
PRK09224	504	threonine dehydratase; Reviewed	100.0
PRK06815	317	hypothetical protein; Provisional	100.0
PRK06381	319	threonine synthase; Validated	100.0
PRK07334	403	threonine dehydratase; Provisional	100.0
PRK02991	441	D-serine dehydratase; Provisional	100.0
cd06448	316	L-Ser-dehyd Serine dehydratase is a pyridoxal phos	100.0
PRK08813	349	threonine dehydratase; Provisional	100.0
TIGR02035	431	D_Ser_am_lyase D-serine ammonia-lyase. This family	100.0
PRK08246	310	threonine dehydratase; Provisional	100.0
PRK06352	351	threonine synthase; Validated	100.0
PRK08197	394	threonine synthase; Validated	100.0
cd01563	324	Thr-synth_1 Threonine synthase is a pyridoxal phos	100.0
PRK07591	421	threonine synthase; Validated	100.0
cd00640	244	Trp-synth-beta_II Tryptophan synthase beta superfa	100.0
PRK07409	353	threonine synthase; Validated	100.0
PRK05638	442	threonine synthase; Validated	100.0
PRK06260	397	threonine synthase; Validated	100.0
PRK06721	352	threonine synthase; Reviewed	100.0
PRK06450	338	threonine synthase; Validated	100.0
PRK08206	399	diaminopropionate ammonia-lyase; Provisional	100.0
PLN02569	484	threonine synthase	100.0
KOG1251	323	consensus Serine racemase [Signal transduction mec	100.0
PRK08329	347	threonine synthase; Validated	100.0
TIGR01747	376	diampropi_NH3ly diaminopropionate ammonia-lyase fa	100.0
KOG1481	391	consensus Cysteine synthase [Amino acid transport	100.0
TIGR00260	328	thrC threonine synthase. Involved in threonine bio	100.0
TIGR01275	311	ACC_deam_rel pyridoxal phosphate-dependent enzymes	100.0
TIGR03528	396	2_3_DAP_am_ly diaminopropionate ammonia-lyase. Mem	100.0
PRK03910	331	D-cysteine desulfhydrase; Validated	100.0
PF00291	306	PALP: Pyridoxal-phosphate dependent enzyme; InterP	100.0
TIGR00263	385	trpB tryptophan synthase, beta subunit. Tryptophan	100.0
PRK13028	402	tryptophan synthase subunit beta; Provisional	100.0
PRK04346	397	tryptophan synthase subunit beta; Validated	100.0
PRK13802	695	bifunctional indole-3-glycerol phosphate synthase/	100.0
PRK14045	329	1-aminocyclopropane-1-carboxylate deaminase; Provi	100.0
TIGR01415	419	trpB_rel pyridoxal-phosphate dependent TrpB-like e	100.0
PLN02618	410	tryptophan synthase, beta chain	100.0
PRK12390	337	1-aminocyclopropane-1-carboxylate deaminase; Provi	100.0
PRK12391	427	tryptophan synthase subunit beta; Reviewed	100.0
cd06449	307	ACCD Aminocyclopropane-1-carboxylate deaminase (AC	100.0
cd06446	365	Trp-synth_B Tryptophan synthase-beta: Trptophan sy	100.0
TIGR01274	337	ACC_deam 1-aminocyclopropane-1-carboxylate deamina	100.0
TIGR03844	398	cysteate_syn cysteate synthase. Members of this fa	100.0
PRK13803	610	bifunctional phosphoribosylanthranilate isomerase/	100.0
COG0498	411	ThrC Threonine synthase [Amino acid transport and	100.0
COG2515	323	Acd 1-aminocyclopropane-1-carboxylate deaminase [A	99.95
COG0133	396	TrpB Tryptophan synthase beta chain [Amino acid tr	99.94
cd01560	460	Thr-synth_2 Threonine synthase catalyzes the final	99.91
PRK09225	462	threonine synthase; Validated	99.91
COG1350	432	Predicted alternative tryptophan synthase beta-sub	99.91
KOG1395	477	consensus Tryptophan synthase beta chain [Amino ac	99.9
COG3048	443	DsdA D-serine dehydratase [Amino acid transport an	99.85
PF03808	172	Glyco_tran_WecB: Glycosyl transferase WecB/TagA/Cp	94.97
cd06533	171	Glyco_transf_WecG_TagA The glycosyltransferase Wec	93.71
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	91.77
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	91.72
PF07279	218	DUF1442: Protein of unknown function (DUF1442); In	91.55
TIGR00696	177	wecB_tagA_cpsF bacterial polymer biosynthesis prot	91.53
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	90.88
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	90.84
PF00764	388	Arginosuc_synth: Arginosuccinate synthase; InterPr	90.79
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	90.18
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	89.94
PRK03659	601	glutathione-regulated potassium-efflux system prot	89.29
KOG0025	354	consensus Zn2+-binding dehydrogenase (nuclear rece	89.0
TIGR02819	393	fdhA_non_GSH formaldehyde dehydrogenase, glutathio	88.84
PRK03562	621	glutathione-regulated potassium-efflux system prot	88.56
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	88.25
PRK08862	227	short chain dehydrogenase; Provisional	88.14
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	87.55
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	87.49
PRK08703	239	short chain dehydrogenase; Provisional	87.0
TIGR00670	301	asp_carb_tr aspartate carbamoyltransferase. Ornith	86.85
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	86.74
cd08274	350	MDR9 Medium chain dehydrogenases/reductase (MDR)/z	86.73
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	86.7
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	86.5
PF01041	363	DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransfe	86.23
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	86.19
PRK08628	258	short chain dehydrogenase; Provisional	85.99
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	85.88
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	85.81
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	85.7
TIGR02822	329	adh_fam_2 zinc-binding alcohol dehydrogenase famil	85.04
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	84.85
PRK08589	272	short chain dehydrogenase; Validated	84.85
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	84.78
PRK05993	277	short chain dehydrogenase; Provisional	84.75
PRK06182	273	short chain dehydrogenase; Validated	84.51
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	84.49
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	84.41
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	84.36
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	84.34
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	84.26
PRK08340	259	glucose-1-dehydrogenase; Provisional	84.19
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	84.18
cd08256	350	Zn_ADH2 Alcohol dehydrogenases of the MDR family.	84.09
PRK12743	256	oxidoreductase; Provisional	84.04
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	83.94
PRK07062	265	short chain dehydrogenase; Provisional	83.74
PRK08226	263	short chain dehydrogenase; Provisional	83.55
PRK06139	330	short chain dehydrogenase; Provisional	83.45
PRK07109	334	short chain dehydrogenase; Provisional	83.44
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	83.42
PRK05854	313	short chain dehydrogenase; Provisional	83.39
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	83.11
PRK06114	254	short chain dehydrogenase; Provisional	82.77
PF00070	80	Pyr_redox: Pyridine nucleotide-disulphide oxidored	82.69
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	82.67
COG2130	340	Putative NADP-dependent oxidoreductases [General f	82.58
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	82.57
PRK06720	169	hypothetical protein; Provisional	82.53
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	82.5
cd08296	333	CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci	82.49
COG0800	211	Eda 2-keto-3-deoxy-6-phosphogluconate aldolase [Ca	82.48
KOG2862	385	consensus Alanine-glyoxylate aminotransferase AGT1	82.36
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	82.12
PRK12937	245	short chain dehydrogenase; Provisional	81.93
PF00185	158	OTCace: Aspartate/ornithine carbamoyltransferase,	81.72
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	81.55
PF09837	122	DUF2064: Uncharacterized protein conserved in bact	81.25
PRK12828	239	short chain dehydrogenase; Provisional	81.24
PRK14030	445	glutamate dehydrogenase; Provisional	81.22
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	81.18
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	80.98
PRK07523	255	gluconate 5-dehydrogenase; Provisional	80.96
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	80.9
cd08287	345	FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-lik	80.71
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	80.66
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	80.56
PF01210	157	NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate	80.52
PRK07097	265	gluconate 5-dehydrogenase; Provisional	80.13
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	80.13
PRK08277	278	D-mannonate oxidoreductase; Provisional	80.11
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	80.01

>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]

Probab=100.00  E-value=1.9e-53  Score=351.08  Aligned_cols=197  Identities=58%  Similarity=0.955  Sum_probs=187.4

Q ss_pred             hhhhhccccCCcceecccccCCCCceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHH
Q 028618            9 AKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFM   88 (206)
Q Consensus         9 ~~~i~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~alA~~   88 (206)
                      ++.+.+.+++|||++++++....+++||+|+|++||+||.|||.|.+|+.+|+++|.++|| .+||++||||+|.+||+.
T Consensus         2 ~~~~~~~iG~TPlvrL~~~~~~~~~~i~~KlE~~NP~gSvKDR~A~~mI~~Ae~~G~l~pG-~tIVE~TSGNTGI~LA~v   80 (300)
T COG0031           2 YESILDLIGNTPLVRLNRLSPGTGVEIYAKLESFNPGGSVKDRIALYMIEDAEKRGLLKPG-GTIVEATSGNTGIALAMV   80 (300)
T ss_pred             ccchHHHhCCCCcEeecccCCCCCceEEEEhhhcCCCCchhHHHHHHHHHHHHHcCCCCCC-CEEEEcCCChHHHHHHHH
Confidence            4568889999999999999988889999999999999999999999999999999999999 589999999999999999


Q ss_pred             HHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCC-hHHHHHHHHHHHHhCCC-eEEcCCCCCCccHHHHHHhHHH
Q 028618           89 AAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKG-MKGAVQKAEEILAKTPN-AYMLQQFENPANPKIHYETTGP  166 (206)
Q Consensus        89 a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~-~~~~~~~a~~~~~~~~~-~~~~~~~~~~~~~~~g~~t~~~  166 (206)
                      |+.+|+++++|||++++++|+++|++|||+|+.++.... +..+.+++++++++.|+ .+|++||+||.||..||.|++.
T Consensus        81 aa~~Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~~~g~~~~a~~~a~el~~~~p~~~~~~~Qf~NpaN~~aH~~tT~~  160 (300)
T COG0031          81 AAAKGYRLIIVMPETMSQERRKLLRALGAEVILTPGAPGNMKGAIERAKELAAEIPGYAVWLNQFENPANPEAHYETTGP  160 (300)
T ss_pred             HHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCCCCCchHHHHHHHHHHHHhCCCceEchhhcCCCccHHHHHhhhHH
Confidence            999999999999999999999999999999999998444 77899999999999988 6778899999999999999999


Q ss_pred             HHHhhhCCCCCEEEEccCcchHHHHHHHHHHhcCCCCeEC
Q 028618          167 ELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKVR  206 (206)
Q Consensus       167 Ei~~q~~~~~d~vv~~vG~Gg~~aGi~~~~k~~~p~~~vi  206 (206)
                      ||++|+++.+|++|+++|||||++|++++||+.+|+++||
T Consensus       161 EI~~~~~g~~d~fVagvGTGGTitGvar~Lk~~~p~i~iv  200 (300)
T COG0031         161 EIWQQTDGKVDAFVAGVGTGGTITGVARYLKERNPNVRIV  200 (300)
T ss_pred             HHHHHhCCCCCEEEEeCCcchhHHHHHHHHHhhCCCcEEE
Confidence            9999998889999999999999999999999999999985

>PLN03013 cysteine synthase

Probab=100.00  E-value=2.5e-53  Score=367.70  Aligned_cols=201  Identities=75%  Similarity=1.236  Sum_probs=189.5

Q ss_pred             cchhhhhhccccCCcceecccccCCCCceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHH
Q 028618            6 SNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGL   85 (206)
Q Consensus         6 ~~~~~~i~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~al   85 (206)
                      +++++.+.+.+++|||++++.+++..+++||+|+|++||+||||||+|.+++..++++|.+.+|+++||++|+||||.|+
T Consensus       111 ~~~~~~i~~~iG~TPLv~l~~l~~~~g~~Iy~KlE~lNPtGSfKdR~A~~~l~~a~~~G~l~pG~~~VVeaSSGN~G~AL  190 (429)
T PLN03013        111 LNIADNVSQLIGKTPMVYLNSIAKGCVANIAAKLEIMEPCCSVKDRIGYSMVTDAEQKGFISPGKSVLVEPTSGNTGIGL  190 (429)
T ss_pred             HHHHHHHHhcCCCCCeEECcccccccCCeEEEEeccCCCccccHHHHHHHHHHHHHHcCCcCCCCcEEEEECCcHHHHHH
Confidence            35788899999999999999998877889999999999999999999999999999999998887789999999999999


Q ss_pred             HHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHH
Q 028618           86 AFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTG  165 (206)
Q Consensus        86 A~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~  165 (206)
                      |++|+.+|++++||||+++++.|+++|+.+||+|+.+++...+.++.+.+++++++.++++|++||+|+.++..||.|+|
T Consensus       191 A~~a~~~G~~~~VvvP~~~s~~K~~~ira~GAeVi~v~~~~~~~~a~~~A~ela~~~~g~~~~~qy~Np~n~~ah~~ttg  270 (429)
T PLN03013        191 AFIAASRGYRLILTMPASMSMERRVLLKAFGAELVLTDPAKGMTGAVQKAEEILKNTPDAYMLQQFDNPANPKIHYETTG  270 (429)
T ss_pred             HHHHHHcCCCEEEEECCCCcHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHhhcCCeEeCCCCCCHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999998775566888999999888778999999999999878999999


Q ss_pred             HHHHhhhCCCCCEEEEccCcchHHHHHHHHHHhcCCCCeEC
Q 028618          166 PELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKVR  206 (206)
Q Consensus       166 ~Ei~~q~~~~~d~vv~~vG~Gg~~aGi~~~~k~~~p~~~vi  206 (206)
                      +||++|+++.||+||+|+||||+++|++++||+.+|++|||
T Consensus       271 ~EI~eq~~~~~D~vV~~vGtGGtisGiar~lKe~~P~vkVi  311 (429)
T PLN03013        271 PEIWDDTKGKVDIFVAGIGTGGTITGVGRFIKEKNPKTQVI  311 (429)
T ss_pred             HHHHHhcCCCCCEEEEeCCccHHHHHHHHHHHhhCCCCEEE
Confidence            99999997789999999999999999999999999999986

>PLN02565 cysteine synthase

Probab=100.00  E-value=7e-53  Score=356.87  Aligned_cols=200  Identities=89%  Similarity=1.351  Sum_probs=186.1

Q ss_pred             chhhhhhccccCCcceecccccCCCCceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHH
Q 028618            7 NIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLA   86 (206)
Q Consensus         7 ~~~~~i~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~alA   86 (206)
                      .+++.+...+++|||++++.++...+.+||+|+|++|||||||||+|.+++..+.++|.+.+|.+.||++|+||||+|+|
T Consensus         4 ~~~~~~~~~ig~TPLv~l~~l~~~~~~~i~~K~E~~nPtGSfKdR~A~~~l~~~~~~g~~~~g~~~vv~aSsGN~g~alA   83 (322)
T PLN02565          4 SIAKDVTELIGKTPLVYLNNVVDGCVARIAAKLEMMEPCSSVKDRIGYSMITDAEEKGLIKPGESVLIEPTSGNTGIGLA   83 (322)
T ss_pred             hhhhhHHHHhCCCceEEccccCCCCCceEEEEecccCCccchHHHHHHHHHHHHHHcCCCCCCCcEEEEECCChHHHHHH
Confidence            45677899999999999988776667899999999999999999999999999999998888867899999999999999


Q ss_pred             HHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHHH
Q 028618           87 FMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGP  166 (206)
Q Consensus        87 ~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~  166 (206)
                      ++|+.+|++|+||||+++++.|+++++.+||+|+.++.+.+++++.+.+++++++.++++|++||+|+.|+..||+|+++
T Consensus        84 ~~a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~~~~~~~~~~~a~~l~~~~~~~~~~~q~~n~~n~~~~~~t~a~  163 (322)
T PLN02565         84 FMAAAKGYKLIITMPASMSLERRIILLAFGAELVLTDPAKGMKGAVQKAEEILAKTPNSYILQQFENPANPKIHYETTGP  163 (322)
T ss_pred             HHHHHcCCeEEEEeCCCCcHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHhCCCcEeecccCCHhHHHHHHHHHHH
Confidence            99999999999999999999999999999999999987644678889999998887688999999999998889999999


Q ss_pred             HHHhhhCCCCCEEEEccCcchHHHHHHHHHHhcCCCCeEC
Q 028618          167 ELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKVR  206 (206)
Q Consensus       167 Ei~~q~~~~~d~vv~~vG~Gg~~aGi~~~~k~~~p~~~vi  206 (206)
                      ||++|+++.||+||+|+|+||+++|++.+||+.+|++|||
T Consensus       164 Ei~~q~~~~~d~vv~~vG~GG~l~Gi~~~lk~~~p~~kvi  203 (322)
T PLN02565        164 EIWKGTGGKVDAFVSGIGTGGTITGAGKYLKEQNPDIKLY  203 (322)
T ss_pred             HHHHhcCCCCCEEEEcCCchHHHHHHHHHHHHhCCCCEEE
Confidence            9999997679999999999999999999999999999986

>PRK11761 cysM cysteine synthase B; Provisional

Probab=100.00  E-value=2.7e-52  Score=349.85  Aligned_cols=198  Identities=49%  Similarity=0.759  Sum_probs=184.6

Q ss_pred             chhhhhhccccCCcceecccccCCCCceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHH
Q 028618            7 NIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLA   86 (206)
Q Consensus         7 ~~~~~i~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~alA   86 (206)
                      |+|+++.+.+++|||+++++++...|++||+|+|++|||||||+|++.+++.++.++|.+.++ ++||++|+||||+|+|
T Consensus         1 ~~~~~i~~~~g~TPl~~~~~l~~~~g~~i~~K~E~~nptGS~K~R~a~~~~~~a~~~g~~~~g-~~vv~aSsGN~g~alA   79 (296)
T PRK11761          1 MAYPTLEDTIGNTPLVKLQRLPPDRGNTILAKLEGNNPAGSVKDRPALSMIVQAEKRGEIKPG-DTLIEATSGNTGIALA   79 (296)
T ss_pred             CccccHHHhcCCCceEeccccccCCCCEEEEEEcccCCCCCchhHHHHHHHHHHHHcCCCCCC-CEEEEeCCChHHHHHH
Confidence            467889999999999999999888889999999999999999999999999999999987776 5799999999999999


Q ss_pred             HHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHHH
Q 028618           87 FMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGP  166 (206)
Q Consensus        87 ~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~  166 (206)
                      ++|+.+|++|+||||+++++.|++.++.+||+|+.++....++++.+.+++++++. +++|++||+|+.++..||.|++.
T Consensus        80 ~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~a~~l~~~~-~~~~~~~~~n~~~~~~~~~t~~~  158 (296)
T PRK11761         80 MIAAIKGYRMKLIMPENMSQERRAAMRAYGAELILVPKEQGMEGARDLALQMQAEG-EGKVLDQFANPDNPLAHYETTGP  158 (296)
T ss_pred             HHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHhcc-CCEecCCCCChhhHHHHhhchHH
Confidence            99999999999999999999999999999999999997444778888899988876 78999999999998889999999


Q ss_pred             HHHhhhCCCCCEEEEccCcchHHHHHHHHHHhcCCCCeEC
Q 028618          167 ELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKVR  206 (206)
Q Consensus       167 Ei~~q~~~~~d~vv~~vG~Gg~~aGi~~~~k~~~p~~~vi  206 (206)
                      ||++|+++.+|+||+|+|+||+++|++.+||+.+|++|||
T Consensus       159 Ei~eq~~~~~d~iv~~vG~Gg~~~Gi~~~lk~~~~~~kvi  198 (296)
T PRK11761        159 EIWRQTEGRITHFVSSMGTTGTIMGVSRYLKEQNPAVQIV  198 (296)
T ss_pred             HHHHhcCCCCCEEEecCCcHHHHHHHHHHHHHhCCCCEEE
Confidence            9999997679999999999999999999999999999986

>PLN02556 cysteine synthase/L-3-cyanoalanine synthase

Probab=100.00  E-value=8.4e-52  Score=355.32  Aligned_cols=201  Identities=62%  Similarity=1.040  Sum_probs=187.7

Q ss_pred             cchhhhhhccccCCcceecccccCCCCceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHH
Q 028618            6 SNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGL   85 (206)
Q Consensus         6 ~~~~~~i~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~al   85 (206)
                      +++++++...+++|||+++++++...|++||+|+|++||+||||||++.+++.++.++|.+.||.++||++|+||||+|+
T Consensus        47 ~~~~~~v~~~ig~TPl~~l~~l~~~~g~~I~~KlE~~nPtGS~KdR~A~~~l~~a~~~G~i~pG~~~vV~aSsGN~G~al  126 (368)
T PLN02556         47 TKIKTDASQLIGKTPLVYLNKVTEGCGAYIAAKQEMFQPTSSIKDRPALAMIEDAEKKNLITPGKTTLIEPTSGNMGISL  126 (368)
T ss_pred             chhhhhHHHhcCCCccEEccccccccCCEEEEEecccCCccchHHHHHHHHHHHHHHcCCcCCCCCEEEEeCCchHHHHH
Confidence            34668899999999999999998888899999999999999999999999999999999999987889999999999999


Q ss_pred             HHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHH
Q 028618           86 AFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTG  165 (206)
Q Consensus        86 A~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~  165 (206)
                      |++|+.+|++|++|||+.++..|+++++.+||+|+.++......+.++.+.++++++++++|++||+|+.++..||.+++
T Consensus       127 A~~a~~~G~~~~ivvp~~~~~~k~~~lr~~GA~Vi~~~~~~~~~~~~~~a~~l~~~~~~~~~~~q~~np~~~~~g~~ttg  206 (368)
T PLN02556        127 AFMAAMKGYKMILTMPSYTSLERRVTMRAFGAELVLTDPTKGMGGTVKKAYELLESTPDAFMLQQFSNPANTQVHFETTG  206 (368)
T ss_pred             HHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECCCCCccHHHHHHHHHHHhcCCCCccCCCCCHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999998654345788888888888888999999999999767999999


Q ss_pred             HHHHhhhCCCCCEEEEccCcchHHHHHHHHHHhcCCCCeEC
Q 028618          166 PELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKVR  206 (206)
Q Consensus       166 ~Ei~~q~~~~~d~vv~~vG~Gg~~aGi~~~~k~~~p~~~vi  206 (206)
                      .||++|+.+.+|+||+|+|||||++|++.+||+.+|++|||
T Consensus       207 ~EI~eq~~~~~D~vV~~vGtGGt~aGv~~~lk~~~p~~kVi  247 (368)
T PLN02556        207 PEIWEDTLGQVDIFVMGIGSGGTVSGVGKYLKSKNPNVKIY  247 (368)
T ss_pred             HHHHHhcCCCCCEEEEcCCcchHHHHHHHHHHHhCCCCEEE
Confidence            99999986689999999999999999999999999999986

>PLN00011 cysteine synthase

Probab=100.00  E-value=4.3e-51  Score=346.51  Aligned_cols=204  Identities=72%  Similarity=1.137  Sum_probs=187.7

Q ss_pred             ccccchhhhhhccccCCcceecccccCCCCceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchH
Q 028618            3 VESSNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTG   82 (206)
Q Consensus         3 ~~~~~~~~~i~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g   82 (206)
                      +|+....+.+.+.+++|||+++++++...|.+||+|+|++|||||||+|++.+++..+.++|.+.|+.++||++|+||||
T Consensus         2 ~~~~~~~~~~~~~~g~TPl~~l~~l~~~~g~~i~~K~E~~nPtGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~aSsGN~g   81 (323)
T PLN00011          2 EDRCLIKNDVTELIGNTPMVYLNNIVDGCVARIAAKLEMMEPCSSVKDRIAYSMIKDAEDKGLITPGKSTLIEATAGNTG   81 (323)
T ss_pred             cchhhHHhhHHHHhCCCceEEccccCCCCCceEEEEecccCCccccchHHHHHHHHHHHHcCCCCCCCcEEEEeCCChHH
Confidence            35556777888999999999999988766789999999999999999999999999999999888876789999999999


Q ss_pred             HHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHH
Q 028618           83 IGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYE  162 (206)
Q Consensus        83 ~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~  162 (206)
                      +|+|++|+.+|++|++|||..+++.|+++++.+||+|+.++.+...+++.+.+++++++.++++|++||+|+.++..||.
T Consensus        82 ~alA~~a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~n~~n~~~~~~  161 (323)
T PLN00011         82 IGLACIGAARGYKVILVMPSTMSLERRIILRALGAEVHLTDQSIGLKGMLEKAEEILSKTPGGYIPQQFENPANPEIHYR  161 (323)
T ss_pred             HHHHHHHHHcCCeEEEEeCCCCCHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHhCCCeEEeccccCCccHHHHHH
Confidence            99999999999999999999999999999999999999999764445677888888888778899999999999878999


Q ss_pred             hHHHHHHhhhCCCCCEEEEccCcchHHHHHHHHHHhcCCCCeEC
Q 028618          163 TTGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKVR  206 (206)
Q Consensus       163 t~~~Ei~~q~~~~~d~vv~~vG~Gg~~aGi~~~~k~~~p~~~vi  206 (206)
                      +++.||++|+.+.||+||+|+|||||++|++.+||+.+|++|||
T Consensus       162 t~~~EI~~q~~~~~D~iv~~vGtGGt~aGi~~~lk~~~~~~kvi  205 (323)
T PLN00011        162 TTGPEIWRDSAGKVDILVAGVGTGGTATGVGKFLKEKNKDIKVC  205 (323)
T ss_pred             HHHHHHHHhcCCCCCEEEEeCCchHHHHHHHHHHHhhCCCCEEE
Confidence            99999999996689999999999999999999999999999986

>COG1171 IlvA Threonine dehydratase [Amino acid transport and metabolism]

Probab=100.00  E-value=6.6e-52  Score=347.49  Aligned_cols=194  Identities=25%  Similarity=0.322  Sum_probs=181.6

Q ss_pred             cchhhhhhccccCCcceecccccCCCCceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHH
Q 028618            6 SNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGL   85 (206)
Q Consensus         6 ~~~~~~i~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~al   85 (206)
                      ...+.+++..+.+|||.+++.|++.+|++||+|+|++||+||||.|||++.+..+.+++..   ..+||++|+||||+++
T Consensus        13 ~~A~~ri~~~~~~TPL~~s~~Ls~~~g~~v~lK~E~lQ~~gSFK~RGA~n~i~~Ls~e~~~---~~gViaaSaGNHaQGv   89 (347)
T COG1171          13 LAAAARLKGVVNPTPLQRSPSLSERLGAEIYLKRENLQPVGSFKIRGAYNKLSSLSEEEER---AAGVIAASAGNHAQGV   89 (347)
T ss_pred             HHHHHHHhCcccCCCcccchhhHHhhCceEEEeeccCcccccchhhhHHHHHHhcChhhhh---cCceEEecCCcHHHHH
Confidence            3456789999999999999999999999999999999999999999999999987644322   2579999999999999


Q ss_pred             HHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHH
Q 028618           86 AFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTG  165 (206)
Q Consensus        86 A~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~  165 (206)
                      |++|+++|+|++||||.++|..|++..+.||++|++++.+  |+++...+.++++++ |+.|++|||+|+. ++||+|++
T Consensus        90 A~aa~~lGi~a~IvMP~~tp~~Kv~a~r~~GaeVil~g~~--~dda~~~a~~~a~~~-G~~~i~pfD~p~v-iAGQGTi~  165 (347)
T COG1171          90 AYAAKRLGIKATIVMPETTPKIKVDATRGYGAEVILHGDN--FDDAYAAAEELAEEE-GLTFVPPFDDPDV-IAGQGTIA  165 (347)
T ss_pred             HHHHHHhCCCEEEEecCCCcHHHHHHHHhcCCEEEEECCC--HHHHHHHHHHHHHHc-CCEEeCCCCCcce-eecccHHH
Confidence            9999999999999999999999999999999999999998  889999999999997 8999999999998 79999999


Q ss_pred             HHHHhhhCCCCCEEEEccCcchHHHHHHHHHHhcCCCCeEC
Q 028618          166 PELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKVR  206 (206)
Q Consensus       166 ~Ei~~q~~~~~d~vv~~vG~Gg~~aGi~~~~k~~~p~~~vi  206 (206)
                      .||++|++..||+||||+|+||+++|++.++|...|++|||
T Consensus       166 lEileq~~~~~d~v~vpvGGGGLisGia~~~k~~~p~~~vI  206 (347)
T COG1171         166 LEILEQLPDLPDAVFVPVGGGGLISGIATALKALSPEIKVI  206 (347)
T ss_pred             HHHHHhccccCCEEEEecCccHHHHHHHHHHHHhCCCCeEE
Confidence            99999996557999999999999999999999999999997

>TIGR01138 cysM cysteine synthase B

Probab=100.00  E-value=7.4e-51  Score=340.40  Aligned_cols=193  Identities=49%  Similarity=0.788  Sum_probs=179.7

Q ss_pred             hhccccCCcceecccccCCCCceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHHHH
Q 028618           12 VTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAA   91 (206)
Q Consensus        12 i~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~alA~~a~~   91 (206)
                      |.+.+++|||+++++++...|.+||+|+|++|||||||+|++.+++..+.++|.+.++ +++|++|+||||+|+|++|+.
T Consensus         2 i~~~ig~TPl~~~~~l~~~~g~~i~~K~E~~nptGS~K~R~a~~~v~~a~~~g~~~~g-~~vv~aSsGN~g~alA~~a~~   80 (290)
T TIGR01138         2 IEQTVGNTPLVRLQRMGPENGSEVWLKLEGNNPAGSVKDRPALSMIVEAEKRGEIKPG-DVLIEATSGNTGIALAMIAAL   80 (290)
T ss_pred             hHHhCCCCceEEccccccCCCCeEEEEEccCCCCccHHHHHHHHHHHHHHHcCCCCCC-CEEEEECCChHHHHHHHHHHH
Confidence            5678999999999999988889999999999999999999999999999999987776 579999999999999999999


Q ss_pred             CCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHHHHHHhh
Q 028618           92 KQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKG  171 (206)
Q Consensus        92 ~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~q  171 (206)
                      +|++|++|||++.++.|+++++.+||+|+.++.+..++++.+.+++++++.+ .+|++||+|+.++..||.+++.||++|
T Consensus        81 ~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~v~~~~~~~~~~~~a~~l~~~~~-~~~~~~~~~~~~~~~~~~t~~~Ei~~q  159 (290)
T TIGR01138        81 KGYRMKLLMPDNMSQERKAAMRAYGAELILVTKEEGMEGARDLALELANRGE-GKLLDQFNNPDNPYAHYTSTGPEIWQQ  159 (290)
T ss_pred             cCCeEEEEECCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCC-CCCCCccCCcccHHHHhHhHHHHHHHH
Confidence            9999999999999999999999999999999875447788899999988874 468999999999877899999999999


Q ss_pred             hCCCCCEEEEccCcchHHHHHHHHHHhcCCCCeEC
Q 028618          172 SGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKVR  206 (206)
Q Consensus       172 ~~~~~d~vv~~vG~Gg~~aGi~~~~k~~~p~~~vi  206 (206)
                      +++.+|+||+|+||||+++|++.+||+.+|++|||
T Consensus       160 ~~~~~d~iv~~vG~Gg~~~Gv~~~lk~~~~~~kvi  194 (290)
T TIGR01138       160 TGGRITHFVSSMGTTGTIMGVSRFLKEQNPPVQIV  194 (290)
T ss_pred             cCCCCCEEEECCCchHHHHHHHHHHHHhCCCCEEE
Confidence            97679999999999999999999999999999986

Alternate name: O-acetylserine (thiol)-lyase

>TIGR01136 cysKM cysteine synthases

Probab=100.00  E-value=1.6e-50  Score=339.81  Aligned_cols=193  Identities=64%  Similarity=1.038  Sum_probs=180.4

Q ss_pred             hccccCCcceecccccCCCCceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHC
Q 028618           13 TELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAK   92 (206)
Q Consensus        13 ~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~   92 (206)
                      ...+++|||++++.|++..|.+||+|+|++|||||||+|++.+++..+.++|.+.++ ++++++|+||||+|+|++|+.+
T Consensus         2 ~~~vg~TPL~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~g-~~vv~aSsGN~g~alA~~a~~~   80 (299)
T TIGR01136         2 EELIGNTPLVRLNRLAPGCDARVLAKLEGRNPSGSVKDRIALSMIEDAEKRGLLKPG-DTIIEATSGNTGIALAMVAAAK   80 (299)
T ss_pred             ccccCCCceEEccccCCCCCceEEEEEcccCCCCCccHHHHHHHHHHHHHcCCCCCC-CEEEEeCCChHHHHHHHHHHHc
Confidence            467899999999999988889999999999999999999999999999999987766 4799999999999999999999


Q ss_pred             CCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHHHHHHhhh
Q 028618           93 QYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGS  172 (206)
Q Consensus        93 g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~q~  172 (206)
                      |++|+||||+++++.|+++++.+||+|+.++.+..++++.+.+++++++.+++++++||+|+.+++.||++++.||++|+
T Consensus        81 G~~~~i~vp~~~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~ql  160 (299)
T TIGR01136        81 GYKLILTMPETMSLERRKLLRAYGAELILTPAEEGMKGAIDKAEELAAETNKYVMLDQFENPANPEAHYKTTGPEIWRDT  160 (299)
T ss_pred             CCcEEEEECCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHhhCCCeEecCCCCCchhHHHHHHHHHHHHHHhc
Confidence            99999999999999999999999999999998755678999999998886578899999999988889999999999999


Q ss_pred             CCCCCEEEEccCcchHHHHHHHHHHhcCCCCeEC
Q 028618          173 GGRIDALVSGIGTGGTITGAGKFLKEKNPNIKVR  206 (206)
Q Consensus       173 ~~~~d~vv~~vG~Gg~~aGi~~~~k~~~p~~~vi  206 (206)
                      ++.||+||+|+|+||+++|++.+|++.+|++|||
T Consensus       161 ~~~~d~iv~~vG~Gg~~~G~~~~~~~~~~~~~vi  194 (299)
T TIGR01136       161 DGRIDHFVAGVGTGGTITGVGRYLKEQNPNIKIV  194 (299)
T ss_pred             CCCCCEEEEcCchhHHHHHHHHHHHHhCCCCEEE
Confidence            7679999999999999999999999999999986

This model discriminates cysteine synthases (EC 2.5.1.47) (both CysK and CysM) from cystathionine beta-synthase, a protein found primarily in eukaryotes and carrying a C-terminal CBS domain lacking from this protein. Bacterial proteins lacking the CBS domain but otherwise showing resemblamnce to cystathionine beta-synthases and considerable phylogenetic distance from known cysteine synthases were excluded from the seed and score below the trusted cutoff.

>TIGR01139 cysK cysteine synthase A

Probab=100.00  E-value=6.6e-50  Score=336.00  Aligned_cols=192  Identities=64%  Similarity=1.042  Sum_probs=176.5

Q ss_pred             hccccCCcceecccccCCCCceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHC
Q 028618           13 TELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAK   92 (206)
Q Consensus        13 ~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~   92 (206)
                      ..++++|||+++++ ....|.+||+|+|++|||||||+|++.+++..+.++|.+.+| ++++++|+||||+|+|++|+++
T Consensus         2 ~~~~g~TPl~~~~~-~~~~g~~i~~K~E~~nptGS~K~R~a~~~l~~a~~~g~~~~g-~~vv~aSsGN~g~alA~~a~~~   79 (298)
T TIGR01139         2 SELIGNTPLVRLNR-IEGCNANVFVKLEGRNPSGSVKDRIALNMIWDAEKRGLLKPG-KTIVEPTSGNTGIALAMVAAAR   79 (298)
T ss_pred             ccccCCCceEEccc-cCCCCceEEEEEcccCCCCcchHHHHHHHHHHHHHcCCCCCC-CEEEEeCCChhHHHHHHHHHHc
Confidence            46789999999998 556688999999999999999999999999999999987766 5699999999999999999999


Q ss_pred             CCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCC-eEEcCCCCCCccHHHHHHhHHHHHHhh
Q 028618           93 QYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPN-AYMLQQFENPANPKIHYETTGPELWKG  171 (206)
Q Consensus        93 g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~-~~~~~~~~~~~~~~~g~~t~~~Ei~~q  171 (206)
                      |++|+||||+++++.|++.++.+||+|+.++.+..++++.+.+++++++.++ +++++||+|+.+++.||.|++.||++|
T Consensus        80 Gl~~~i~vp~~~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei~~q  159 (298)
T TIGR01139        80 GYKLILTMPETMSIERRKLLKAYGAELVLTPGAEGMKGAIAKAEEIAASTPNSYFMLQQFENPANPEIHRKTTGPEIWRD  159 (298)
T ss_pred             CCeEEEEeCCccCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCcEEcccccCCcccHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999875456788889999888754 558999999998888999999999999


Q ss_pred             hCCCCCEEEEccCcchHHHHHHHHHHhcCCCCeEC
Q 028618          172 SGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKVR  206 (206)
Q Consensus       172 ~~~~~d~vv~~vG~Gg~~aGi~~~~k~~~p~~~vi  206 (206)
                      ++..||+||+|+|+||+++|++.+|++.+|++|||
T Consensus       160 ~~~~~d~vv~~vG~Gg~~~Gi~~~~~~~~~~~~vi  194 (298)
T TIGR01139       160 TDGKLDAFVAGVGTGGTITGVGEVLKEQKPNIKIV  194 (298)
T ss_pred             hCCCCCEEEEecchhHhHHHHHHHHHhcCCCCEEE
Confidence            97679999999999999999999999999999986

This model distinguishes cysteine synthase A (CysK) from cysteine synthase B (CysM). CysM differs in having a broader specificity that also allows the use of thiosulfate to produce cysteine thiosulfonate.

>PRK10717 cysteine synthase A; Provisional

Probab=100.00  E-value=9.9e-50  Score=339.26  Aligned_cols=199  Identities=48%  Similarity=0.804  Sum_probs=177.9

Q ss_pred             chhhhhhccccCCcceecccccCCCCceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHH
Q 028618            7 NIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLA   86 (206)
Q Consensus         7 ~~~~~i~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~alA   86 (206)
                      .+++.+...+++|||++++++++..|++||+|+|++||+||||+|++.+++..++++|.+.++ .+||++|+||||+|+|
T Consensus         2 ~~~~~~~~~~g~TPL~~~~~l~~~~g~~i~~K~E~~nptGS~K~Rga~~~v~~a~~~g~~~~g-~~vv~aSsGN~g~alA   80 (330)
T PRK10717          2 KIFEDVSDTIGNTPLIRLNRASEATGCEILGKAEFLNPGGSVKDRAALNIIWDAEKRGLLKPG-GTIVEGTAGNTGIGLA   80 (330)
T ss_pred             chhhhHHHHhCCCceEEccccCCCCCCeEEEEeeccCCCCCchHHHHHHHHHHHHHcCCCCCC-CEEEEeCCcHHHHHHH
Confidence            357889999999999999999998899999999999999999999999999999999987776 5799999999999999


Q ss_pred             HHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCC------ChHHHHHHHHHHHHhC-CCeEEcCCCCCCccHHH
Q 028618           87 FMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAK------GMKGAVQKAEEILAKT-PNAYMLQQFENPANPKI  159 (206)
Q Consensus        87 ~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~------~~~~~~~~a~~~~~~~-~~~~~~~~~~~~~~~~~  159 (206)
                      ++|+++|++|+||||+.+++.|+++++.+||+|+.++.+.      ..+.+.+.++++.++. .+++|++||+||.+++.
T Consensus        81 ~~a~~~G~~~~vv~p~~~~~~k~~~~~~~GA~V~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~  160 (330)
T PRK10717         81 LVAAARGYKTVIVMPETQSQEKKDLLRALGAELVLVPAAPYANPNNYVKGAGRLAEELVASEPNGAIWANQFDNPANREA  160 (330)
T ss_pred             HHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCcccccccchHHHHHHHHHHHHhhCCCCeEecCCCCChhhHHH
Confidence            9999999999999999999999999999999999999741      1222344444554443 27899999999998778


Q ss_pred             HHHhHHHHHHhhhCCCCCEEEEccCcchHHHHHHHHHHhcCCCCeEC
Q 028618          160 HYETTGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKVR  206 (206)
Q Consensus       160 g~~t~~~Ei~~q~~~~~d~vv~~vG~Gg~~aGi~~~~k~~~p~~~vi  206 (206)
                      ||.|++.||++|++..+|+||+|+|+||+++|++.+||+.+|++|||
T Consensus       161 g~~t~a~Ei~~ql~~~~d~iv~~vG~GG~~~Gi~~~~k~~~~~~~vi  207 (330)
T PRK10717        161 HYETTGPEIWEQTDGKVDGFVCAVGTGGTLAGVSRYLKETNPKVKIV  207 (330)
T ss_pred             HHHhHHHHHHHhcCCCCCEEEEecCchHHHHHHHHHHHHhCCCCEEE
Confidence            99999999999997679999999999999999999999999999986

>PRK07476 eutB threonine dehydratase; Provisional

Probab=100.00  E-value=8e-50  Score=338.71  Aligned_cols=193  Identities=22%  Similarity=0.297  Sum_probs=179.9

Q ss_pred             ccchhhhhhccccCCcceecccccCCCCceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHH
Q 028618            5 SSNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIG   84 (206)
Q Consensus         5 ~~~~~~~i~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~a   84 (206)
                      ....+.+|...+++|||++++++++..|.+||+|+|++||+||||+|++.+++..+.+++..    ++||++|+||||+|
T Consensus         6 i~~a~~~i~~~i~~TPl~~~~~l~~~~g~~l~~K~E~~nptGS~K~R~a~~~i~~a~~~~~~----~gvv~aSsGN~g~a   81 (322)
T PRK07476          6 IYRARRRIAGRVRRTPLVASASLSARAGVPVWLKLETLQPTGSFKLRGATNALLSLSAQERA----RGVVTASTGNHGRA   81 (322)
T ss_pred             HHHHHHHHhCCCCCCCceechhhHHhhCCeEEEEEccCCCCCCchHHHHHHHHHhhhhhhhC----CeEEEECCChHHHH
Confidence            34578899999999999999999988899999999999999999999999999999988862    45999999999999


Q ss_pred             HHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhH
Q 028618           85 LAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETT  164 (206)
Q Consensus        85 lA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~  164 (206)
                      +|++|+.+|++|++|||+++++.|+++++.+||+|+.++.+  ++++.+.+.+++++. +++|++|++||.+ ..||+|+
T Consensus        82 lA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~GA~V~~~~~~--~~~~~~~a~~~~~~~-g~~~~~~~~n~~~-~~g~~t~  157 (322)
T PRK07476         82 LAYAARALGIRATICMSRLVPANKVDAIRALGAEVRIVGRS--QDDAQAEVERLVREE-GLTMVPPFDDPRI-IAGQGTI  157 (322)
T ss_pred             HHHHHHHhCCCEEEEeCCCCCHHHHHHHHHcCCEEEEECCC--HHHHHHHHHHHHHhc-CCEEeCCCCCcce-eechhHH
Confidence            99999999999999999999999999999999999999976  778889999998886 7899999999998 6899999


Q ss_pred             HHHHHhhhCCCCCEEEEccCcchHHHHHHHHHHhcCCCCeEC
Q 028618          165 GPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKVR  206 (206)
Q Consensus       165 ~~Ei~~q~~~~~d~vv~~vG~Gg~~aGi~~~~k~~~p~~~vi  206 (206)
                      +.||++|++ .+|+||+|+|+||+++|++.+||+.+|++|||
T Consensus       158 ~~Ei~~Q~~-~~d~iv~~vG~GG~~~Gv~~~~k~~~~~~~vi  198 (322)
T PRK07476        158 GLEILEALP-DVATVLVPLSGGGLASGVAAAVKAIRPAIRVI  198 (322)
T ss_pred             HHHHHHhCc-CCCEEEEEcChHHHHHHHHHHHHHhCCCCEEE
Confidence            999999994 68999999999999999999999999999986

>PRK08526 threonine dehydratase; Provisional

Probab=100.00  E-value=9.7e-50  Score=346.37  Aligned_cols=193  Identities=24%  Similarity=0.312  Sum_probs=179.5

Q ss_pred             ccchhhhhhccccCCcceecccccCCCCceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHH
Q 028618            5 SSNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIG   84 (206)
Q Consensus         5 ~~~~~~~i~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~a   84 (206)
                      ....++++.+.+++|||+++++|++..|++||+|+|++|||||||+|+|.+.+..+.+++.    .++||++|+||||++
T Consensus         7 i~~a~~~i~~~i~~TPl~~~~~Ls~~~g~~iylK~E~lqptGSfK~RgA~n~i~~l~~~~~----~~gVV~aSaGNhg~a   82 (403)
T PRK08526          7 IYQAKQRISGFVNKTPFAYAPFLSKISGAEVYLKKENLQITGAYKIRGAYNKIANLSEEQK----QHGVIAASAGNHAQG   82 (403)
T ss_pred             HHHHHHHHhCcCCCCCccchHHHHHHhCCeEEEEecCCCCCCCCHHHHHHHHHHhccHhhc----CCEEEEECccHHHHH
Confidence            3456778999999999999999999889999999999999999999999999998876543    257999999999999


Q ss_pred             HHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhH
Q 028618           85 LAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETT  164 (206)
Q Consensus        85 lA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~  164 (206)
                      +|++|+++|++|+||||++++..|++.++.|||+|+.++.+  ++++.+.+.+++++. +++|++||+|+.+ +.||+|+
T Consensus        83 vA~aa~~~Gi~~~IvmP~~~p~~k~~~~r~~GA~Vv~~g~~--~~~a~~~a~~~a~~~-g~~~v~p~~~~~~-i~G~gti  158 (403)
T PRK08526         83 VAISAKKFGIKAVIVMPEATPLLKVSGTKALGAEVILKGDN--YDEAYAFALEYAKEN-NLTFIHPFEDEEV-MAGQGTI  158 (403)
T ss_pred             HHHHHHHcCCCEEEEEcCCCCHHHHHHHHhCCCEEEEECCC--HHHHHHHHHHHHHhc-CCEeeCCCCCHHH-HhhhHHH
Confidence            99999999999999999999999999999999999999876  889999999998886 7899999999987 7899999


Q ss_pred             HHHHHhhhCCCCCEEEEccCcchHHHHHHHHHHhcCCCCeEC
Q 028618          165 GPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKVR  206 (206)
Q Consensus       165 ~~Ei~~q~~~~~d~vv~~vG~Gg~~aGi~~~~k~~~p~~~vi  206 (206)
                      +.||++|+ +.+|+||+|+|+||+++|++.++|+.+|++|||
T Consensus       159 a~EI~eq~-~~~D~vvvpvGgGGl~aGia~~~k~~~p~~kvi  199 (403)
T PRK08526        159 ALEMLDEI-SDLDMVVVPVGGGGLISGIASAAKQINPNIKII  199 (403)
T ss_pred             HHHHHHhc-CCCCEEEEecChHHHHHHHHHHHHHhCCCCEEE
Confidence            99999999 479999999999999999999999999999986

>PRK08198 threonine dehydratase; Provisional

Probab=100.00  E-value=1.8e-49  Score=346.00  Aligned_cols=193  Identities=25%  Similarity=0.385  Sum_probs=179.5

Q ss_pred             ccchhhhhhccccCCcceecccccCCCCceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHH
Q 028618            5 SSNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIG   84 (206)
Q Consensus         5 ~~~~~~~i~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~a   84 (206)
                      ....++++.+.+++|||++++++++..|++||+|+|++|||||||+|+|.+++..+.+++.    .++||++|+||||++
T Consensus         9 i~~a~~~i~~~i~~TPl~~~~~ls~~~g~~i~~K~E~~nptGS~K~R~a~~~i~~~~~~~~----~~~vv~aSsGN~g~a   84 (404)
T PRK08198          9 IEEARERLKGVVRRTPLEYSRTLSELTGAEVYLKCENLQRTGSFKIRGAYNKIASLSEEER----ARGVVAASAGNHAQG   84 (404)
T ss_pred             HHHHHHHHhccCCCCCceehhhHHHHhCCEEEEEECCCCCCCCCHHHHHHHHHHhccHhhc----CCEEEEECCCHHHHH
Confidence            3456788999999999999999998889999999999999999999999999998875554    268999999999999


Q ss_pred             HHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhH
Q 028618           85 LAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETT  164 (206)
Q Consensus        85 lA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~  164 (206)
                      +|++|+.+|++|+||||++++..|+++++.+||+|+.++.+  ++++.+.+++++++. +++|++||+|+.+ ..||+|+
T Consensus        85 lA~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~Vi~~~~~--~~~~~~~a~~~~~~~-g~~~~~~~~~~~~-~~g~~t~  160 (404)
T PRK08198         85 VAYAASLLGIKATIVMPETAPLSKVKATRSYGAEVVLHGDV--YDEALAKAQELAEET-GATFVHPFDDPDV-IAGQGTI  160 (404)
T ss_pred             HHHHHHHcCCCEEEEECCCCCHHHHHHHHhCCCEEEEECCC--HHHHHHHHHHHHHhc-CCEecCCCCCccH-HHHHHHH
Confidence            99999999999999999999999999999999999999876  789999999998886 8899999999998 6899999


Q ss_pred             HHHHHhhhCCCCCEEEEccCcchHHHHHHHHHHhcCCCCeEC
Q 028618          165 GPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKVR  206 (206)
Q Consensus       165 ~~Ei~~q~~~~~d~vv~~vG~Gg~~aGi~~~~k~~~p~~~vi  206 (206)
                      |.||++|+ +++|+||+|+|+||+++|++.+||+.+|++|||
T Consensus       161 a~EI~~q~-~~~d~vv~~vG~GG~~~Gi~~~~k~~~p~~kii  201 (404)
T PRK08198        161 GLEILEDL-PDVDTVVVPIGGGGLISGVATAVKALRPEVRVI  201 (404)
T ss_pred             HHHHHHhC-CCCCEEEEEeCHhHHHHHHHHHHHHhCCCCEEE
Confidence            99999999 479999999999999999999999999999986

>PLN02970 serine racemase

Probab=100.00  E-value=3.9e-49  Score=335.17  Aligned_cols=190  Identities=18%  Similarity=0.227  Sum_probs=176.0

Q ss_pred             hhhhhhccccCCcceecccccCCCCceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHH
Q 028618            8 IAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAF   87 (206)
Q Consensus         8 ~~~~i~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~alA~   87 (206)
                      .++.+...+++|||++++++++..|++||+|+|++|||||||||++.+++..+.+++.    .++||++|+||||.|+|+
T Consensus        17 a~~~i~~~i~~TPL~~~~~l~~~~g~~i~~K~E~~nptGSfKdRga~~~i~~~~~~~~----~~~vv~aSsGN~g~alA~   92 (328)
T PLN02970         17 ARKRIAPFIHRTPVLTSSSLDALAGRSLFFKCECFQKGGAFKFRGACNAIFSLSDDQA----EKGVVTHSSGNHAAALAL   92 (328)
T ss_pred             HHHHHhCcCCCCCeeechhhHHhhCCeEEEEecCCCCCCCcHHHHHHHHHHHhhHhhc----CCeEEEECCcHHHHHHHH
Confidence            4567888999999999999998888999999999999999999999999999875554    257999999999999999


Q ss_pred             HHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHHHH
Q 028618           88 MAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPE  167 (206)
Q Consensus        88 ~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~E  167 (206)
                      +|+.+|++|+||||+++++.|+++|+.+||+|+.++.+  ++++.+.+++++++ ++++|++||+|+.+ ..||+|+++|
T Consensus        93 ~a~~~G~~~~ivvp~~~~~~k~~~~~~~GA~Vi~~~~~--~~~~~~~a~~la~~-~g~~~~~~~~n~~~-~~g~~t~g~E  168 (328)
T PLN02970         93 AAKLRGIPAYIVVPKNAPACKVDAVIRYGGIITWCEPT--VESREAVAARVQQE-TGAVLIHPYNDGRV-ISGQGTIALE  168 (328)
T ss_pred             HHHHcCCCEEEEECCCCCHHHHHHHHhcCCEEEEeCCC--HHHHHHHHHHHHHh-cCCEEeCCCCCcch-hhehHHHHHH
Confidence            99999999999999999999999999999999999986  77888889999887 48999999999998 5799999999


Q ss_pred             HHhhhCCCCCEEEEccCcchHHHHHHHHHHhcCCCCeEC
Q 028618          168 LWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKVR  206 (206)
Q Consensus       168 i~~q~~~~~d~vv~~vG~Gg~~aGi~~~~k~~~p~~~vi  206 (206)
                      |++|++ .||+||+|+|+||+++|++.+||+.+|++|||
T Consensus       169 i~~ql~-~~D~vv~~vG~GG~~~Gi~~~lk~~~~~~kvi  206 (328)
T PLN02970        169 FLEQVP-ELDVIIVPISGGGLISGIALAAKAIKPSIKII  206 (328)
T ss_pred             HHHhcc-CCCEEEEeeCchHHHHHHHHHHHhcCCCCEEE
Confidence            999995 69999999999999999999999999999986

>PRK12483 threonine dehydratase; Reviewed

Probab=100.00  E-value=4.1e-49  Score=350.16  Aligned_cols=188  Identities=26%  Similarity=0.362  Sum_probs=175.4

Q ss_pred             hhhccccCCcceecccccCCCCceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHHH
Q 028618           11 DVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAA   90 (206)
Q Consensus        11 ~i~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~alA~~a~   90 (206)
                      +|.+.+.+|||+++++|++..|++||+|+|++|||||||+|+|.+++..+.++..    .++||++|+||||+++|++|+
T Consensus        30 ~i~~~v~~TPL~~~~~Ls~~~g~~IylK~E~lqptGSfK~RGA~n~i~~l~~~~~----~~GVV~aSaGNha~gvA~aA~  105 (521)
T PRK12483         30 RVYDVARETPLQRAPNLSARLGNQVLLKREDLQPVFSFKIRGAYNKMARLPAEQL----ARGVITASAGNHAQGVALAAA  105 (521)
T ss_pred             HHhhhcCCCCeeEchhhhHhhCCEEEEEEcCCCCCCchHHHHHHHHHHHhHHHHh----cCcEEEECCCHHHHHHHHHHH
Confidence            5778899999999999999999999999999999999999999999988764332    146999999999999999999


Q ss_pred             HCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHHHHHHh
Q 028618           91 AKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWK  170 (206)
Q Consensus        91 ~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~  170 (206)
                      .+|++|+||||+++++.|++.++.+||+|+.++.+  ++++.+.+.+++++. +++|++||+|+.+ ++||+|++.||++
T Consensus       106 ~lGi~~~IvmP~~tp~~Kv~~~r~~GAeVil~g~~--~d~a~~~A~~la~e~-g~~~v~pfdd~~v-iaGqgTig~EI~e  181 (521)
T PRK12483        106 RLGVKAVIVMPRTTPQLKVDGVRAHGGEVVLHGES--FPDALAHALKLAEEE-GLTFVPPFDDPDV-IAGQGTVAMEILR  181 (521)
T ss_pred             HhCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCC--HHHHHHHHHHHHHhc-CCeeeCCCCChHH-HHHHHHHHHHHHH
Confidence            99999999999999999999999999999999976  889999999999886 7899999999998 6899999999999


Q ss_pred             hhCCCCCEEEEccCcchHHHHHHHHHHhcCCCCeEC
Q 028618          171 GSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKVR  206 (206)
Q Consensus       171 q~~~~~d~vv~~vG~Gg~~aGi~~~~k~~~p~~~vi  206 (206)
                      |+++.||+||+|+|+||+++|++.++|+.+|++|||
T Consensus       182 Q~~~~~D~VvvpvGgGGliaGia~~~K~~~p~vkVI  217 (521)
T PRK12483        182 QHPGPLDAIFVPVGGGGLIAGIAAYVKYVRPEIKVI  217 (521)
T ss_pred             HhCCCCCEEEEecCccHHHHHHHHHHHHhCCCCEEE
Confidence            996679999999999999999999999999999996

>PLN02356 phosphateglycerate kinase

Probab=100.00  E-value=1.2e-48  Score=338.25  Aligned_cols=198  Identities=38%  Similarity=0.634  Sum_probs=172.1

Q ss_pred             hhhhhhccccCCcceecccccCCCCceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHH
Q 028618            8 IAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAF   87 (206)
Q Consensus         8 ~~~~i~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~alA~   87 (206)
                      ..+.+.+.+++|||+++++++...|++||+|+|++||+||||||++.+++..+.++|.+.++ ..|+++||||||+|+|+
T Consensus        43 ~~~~~~~~ig~TPLv~~~~l~~~~g~~v~~KlE~~nPtGS~KdR~A~~~i~~a~~~g~~~~~-g~VveaSSGN~g~alA~  121 (423)
T PLN02356         43 PRNGLIDAIGNTPLIRINSLSEATGCEILGKCEFLNPGGSVKDRVAVKIIEEALESGQLFPG-GVVTEGSAGSTAISLAT  121 (423)
T ss_pred             hhhhHHhhcCCCceEECcccccccCCEEEEEeccCCCCCCHHHHHHHHHHHHHHhCCccCCC-CEEEEeCCHHHHHHHHH
Confidence            45668889999999999999888889999999999999999999999999999999987666 46788999999999999


Q ss_pred             HHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCC-----CCh-HHHH---HHHHHHHHh-----------------
Q 028618           88 MAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPA-----KGM-KGAV---QKAEEILAK-----------------  141 (206)
Q Consensus        88 ~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~-----~~~-~~~~---~~a~~~~~~-----------------  141 (206)
                      +|+.+|++|++|||+++++.|+++++.+||+|+.++..     ..+ ..+.   +.+.+++++                 
T Consensus       122 ~aa~~G~~~~ivvP~~~s~~K~~~ir~~GAeVi~v~~~~~~~~~~~~~~a~~~~~~a~e~a~~~~~~~~~~~~~~~~~~~  201 (423)
T PLN02356        122 VAPAYGCKCHVVIPDDVAIEKSQILEALGATVERVRPVSITHKDHYVNIARRRALEANELASKRRKGSETDGIHLEKTNG  201 (423)
T ss_pred             HHHHcCCcEEEEECCCCcHHHHHHHHHcCCEEEEECCccCCCcchhHHHHHHHHHHHHHHHHHhhhcccccccccccccc
Confidence            99999999999999999999999999999999999641     112 1111   234444433                 


Q ss_pred             ---------------CCCeEEcCCCCCCccHHHHHHhHHHHHHhhhCCCCCEEEEccCcchHHHHHHHHHHhcCCCCeEC
Q 028618          142 ---------------TPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKVR  206 (206)
Q Consensus       142 ---------------~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~q~~~~~d~vv~~vG~Gg~~aGi~~~~k~~~p~~~vi  206 (206)
                                     .++.+|++||+|+.++..|+..+|+||++|+++.+|+||+|+||||+++|++++||+.+|++|||
T Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~q~~n~~n~~ahg~gTg~EI~eQl~g~~D~vVv~vGtGGti~Gva~~lK~~~P~vkVi  281 (423)
T PLN02356        202 CISEEEKENSLFSSSCTGGFFADQFENLANFRAHYEGTGPEIWEQTQGNLDAFVAAAGTGGTLAGVSRFLQEKNPNIKCF  281 (423)
T ss_pred             ccccccccccccccCCCCcEecCccCCcchHHHHHhhHHHHHHHhcCCCCCEEEeCCCchHHHHHHHHHHHHhCCCCEEE
Confidence                           14778999999999988876667999999997789999999999999999999999999999986

>PRK06382 threonine dehydratase; Provisional

Probab=100.00  E-value=5.8e-49  Score=342.62  Aligned_cols=191  Identities=24%  Similarity=0.305  Sum_probs=178.0

Q ss_pred             chhhhhhccccCCcceecccccCCCCceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHH
Q 028618            7 NIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLA   86 (206)
Q Consensus         7 ~~~~~i~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~alA   86 (206)
                      ..++++.+.+++|||++++.|++..|++||+|+|++|||||||+|++.+++..+.+.+.    .++||++|+||||+|+|
T Consensus        14 ~a~~~~~~~i~~TPl~~~~~ls~~~g~~v~~K~E~~nptGSfK~Rga~~~i~~~~~~~~----~~gvv~aSsGN~g~a~A   89 (406)
T PRK06382         14 YAKSYLEGYLNRTPLIHSTTFGDEYGGDIYFKLENFQKTGSFKSRGAVFKFSKLSEDEL----RNGVITASAGNHAQGVA   89 (406)
T ss_pred             HHHHHHhCcCCCCCeeEhhhhHHHhCCEEEEEecCCCCCCCCHHHHHHHHHHhcchhcc----CCeEEEECCCHHHHHHH
Confidence            46678999999999999999999889999999999999999999999999988876553    24699999999999999


Q ss_pred             HHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHHH
Q 028618           87 FMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGP  166 (206)
Q Consensus        87 ~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~  166 (206)
                      ++|+.+|++|+||||+++++.|++.++.+||+|+.++.+  ++++.+.+++++++. +++|++||+|+.+ +.||+|+++
T Consensus        90 ~aa~~~G~~~~ivmp~~~~~~k~~~~~~~GA~Vv~~~~~--~~~a~~~a~~la~~~-~~~~v~~~~~~~~-i~g~~t~~~  165 (406)
T PRK06382         90 YAASINGIDAKIVMPEYTIPQKVNAVEAYGAHVILTGRD--YDEAHRYADKIAMDE-NRTFIEAFNDRWV-ISGQGTIGL  165 (406)
T ss_pred             HHHHHcCCCEEEEEcCCCHHHHHHHHHHcCCEEEEECCC--HHHHHHHHHHHHHhc-CCEecCccCChHH-HHHHHHHHH
Confidence            999999999999999999999999999999999999986  789999999999886 7899999999998 689999999


Q ss_pred             HHHhhhCCCCCEEEEccCcchHHHHHHHHHHhcCCCCeEC
Q 028618          167 ELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKVR  206 (206)
Q Consensus       167 Ei~~q~~~~~d~vv~~vG~Gg~~aGi~~~~k~~~p~~~vi  206 (206)
                      ||++|+ +.||+||+|+|+||+++|++.++|+.+|++|||
T Consensus       166 Ei~eq~-~~~d~vvvpvG~GG~~~Gv~~~~k~~~p~~~vi  204 (406)
T PRK06382        166 EIMEDL-PDLDQIIVPVGGGGLISGIALAAKHINPNVKII  204 (406)
T ss_pred             HHHHhc-CCCCEEEEeeChHHHHHHHHHHHHHhCCCCEEE
Confidence            999999 479999999999999999999999999999986

>TIGR02991 ectoine_eutB ectoine utilization protein EutB

Probab=100.00  E-value=1e-48  Score=331.16  Aligned_cols=194  Identities=22%  Similarity=0.298  Sum_probs=178.0

Q ss_pred             cccchhhhhhccccCCcceecccccCCCCceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHH
Q 028618            4 ESSNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGI   83 (206)
Q Consensus         4 ~~~~~~~~i~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~   83 (206)
                      +....++++.+.+++|||++++++++..|.+||+|+|++|||||||+|++.+++..+.+...    ..++|++|+||||+
T Consensus         5 ~i~~a~~~i~~~i~~TPl~~~~~l~~~~g~~l~~K~E~~nptGS~K~R~a~~~i~~~~~~~~----~~~vv~aSsGN~g~   80 (317)
T TIGR02991         5 DIERAAARISGRVEETPLVESPSLSELCGVPVHLKLEHRQTTGSFKLRGATNAVLSLSDTQR----AAGVVAASTGNHGR   80 (317)
T ss_pred             HHHHHHHHHhCcCCCCCceechhhHHhhCCeEEEEeccCCCCCCcHHHHHHHHHHhhhHhcc----CCeEEEECCCHHHH
Confidence            44567889999999999999999998888999999999999999999999999998764322    14799999999999


Q ss_pred             HHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHh
Q 028618           84 GLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYET  163 (206)
Q Consensus        84 alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t  163 (206)
                      |+|++|+++|++|++|||+++++.|++.++.+||+|+.++.+  ++++.+.+++++++. +++|++||+|+++ ..||+|
T Consensus        81 alA~~a~~~G~~~~v~~p~~~~~~k~~~~~~~GA~V~~~~~~--~~~~~~~a~~~~~~~-g~~~~~~~~n~~~-~~g~~t  156 (317)
T TIGR02991        81 ALAYAAAEEGVRATICMSELVPQNKVDEIRRLGAEVRIVGRS--QDDAQEEVERLVADR-GLTMLPPFDHPDI-VAGQGT  156 (317)
T ss_pred             HHHHHHHHhCCCEEEEcCCCCCHHHHHHHHHcCCEEEEeCCC--HHHHHHHHHHHHHhc-CCEeeCCCCChHH-HhhHHH
Confidence            999999999999999999999999999999999999999986  778888899998876 7899999999998 689999


Q ss_pred             HHHHHHhhhCCCCCEEEEccCcchHHHHHHHHHHhcCCCCeEC
Q 028618          164 TGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKVR  206 (206)
Q Consensus       164 ~~~Ei~~q~~~~~d~vv~~vG~Gg~~aGi~~~~k~~~p~~~vi  206 (206)
                      +++||++|++ .+|+||+|+|+||+++|++++||+++|++|||
T Consensus       157 ~a~Ei~~q~~-~~d~vvv~~G~Gg~~~Gi~~~~k~~~p~~~vi  198 (317)
T TIGR02991       157 LGLEVVEQMP-DLATVLVPLSGGGLASGVAMAVKAARPDTRVI  198 (317)
T ss_pred             HHHHHHHhCC-CCCEEEEEcChhHHHHHHHHHHHHhCCCCEEE
Confidence            9999999994 68999999999999999999999999999986

Members of this protein family are EutB, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. Members of this family resemble threonine dehydratases.

>cd01561 CBS_like CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase

Probab=100.00  E-value=5.1e-48  Score=323.53  Aligned_cols=189  Identities=62%  Similarity=1.008  Sum_probs=173.6

Q ss_pred             cCCcceecccccCCCCceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCCcE
Q 028618           17 GNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRL   96 (206)
Q Consensus        17 ~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~   96 (206)
                      ++|||++++++++..|++||+|+|++||+||||+|++.+++..+.++|...++ ++|+++|+||||+|+|++|+++|++|
T Consensus         1 g~TPl~~~~~l~~~~g~~i~~K~E~~~ptgS~K~R~a~~~l~~a~~~g~~~~~-~~vv~~SsGN~g~alA~~a~~~G~~~   79 (291)
T cd01561           1 GNTPLVRLNRLSPGTGAEIYAKLEFFNPGGSVKDRIALYMIEDAEKRGLLKPG-TTIIEPTSGNTGIGLAMVAAAKGYRF   79 (291)
T ss_pred             CCCCEEEccccCCCCCCeEEEEecccCCCCcchHHHHHHHHHHHHHcCCCCCC-CEEEEeCCChHHHHHHHHHHHcCCeE
Confidence            58999999999988899999999999999999999999999999999976555 57999999999999999999999999


Q ss_pred             EEEeCCCCCHHHHHHHHHcCCEEEEeCCCC--ChHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHHHHHHhhhCC
Q 028618           97 IITMPASMSLERRIILRAFGAELVLTDPAK--GMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGG  174 (206)
Q Consensus        97 ~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~--~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~q~~~  174 (206)
                      ++|||.++++.|+++++.+||+|+.++.+.  ..+++.+.+++++++.++++|++||+||.+++.+++|++.||.+|++.
T Consensus        80 ~i~vp~~~~~~k~~~~~~~Ga~v~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~p~~~~g~~~t~~~Ei~~ql~~  159 (291)
T cd01561          80 IIVMPETMSEEKRKLLRALGAEVILTPEAEADGMKGAIAKARELAAETPNAFWLNQFENPANPEAHYETTAPEIWEQLDG  159 (291)
T ss_pred             EEEECCCCCHHHHHHHHHcCCEEEEeCCCCcCCHHHHHHHHHHHHhhCCCcEEecCCCCchHHHHHHHHHHHHHHHHcCC
Confidence            999999999999999999999999999873  237888889999888768999999999999654445999999999976


Q ss_pred             CCCEEEEccCcchHHHHHHHHHHhcCCCCeEC
Q 028618          175 RIDALVSGIGTGGTITGAGKFLKEKNPNIKVR  206 (206)
Q Consensus       175 ~~d~vv~~vG~Gg~~aGi~~~~k~~~p~~~vi  206 (206)
                      .||+||+|+|+||+++|++.+|++.+|+++||
T Consensus       160 ~~d~vv~~~G~Gg~~~Gi~~~~~~~~~~~~vi  191 (291)
T cd01561         160 KVDAFVAGVGTGGTITGVARYLKEKNPNVRIV  191 (291)
T ss_pred             CCCEEEEeCChHHHHHHHHHHHHHhCCCCEEE
Confidence            89999999999999999999999999999986

CBS is a unique heme-containing enzyme that catalyzes a pyridoxal 5'-phosphate (PLP)-dependent condensation of serine and homocysteine to give cystathionine. Deficiency of CBS leads to homocystinuria, an inherited disease of sulfur metabolism characterized by increased levels of the toxic metabolite homocysteine. Cysteine synthase on the other hand catalyzes the last step of cysteine biosynthesis. This subgroup also includes an O-Phosphoserine sulfhydrylase found in hyperthermophilic archaea which produces L-cysteine from sulfide and the more thermostable O-phospho-L-serine.

>TIGR01137 cysta_beta cystathionine beta-synthase

Probab=100.00  E-value=2.8e-48  Score=343.02  Aligned_cols=197  Identities=47%  Similarity=0.798  Sum_probs=179.2

Q ss_pred             hhhhhccccCCcceecccccCCCCceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHH
Q 028618            9 AKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFM   88 (206)
Q Consensus         9 ~~~i~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~alA~~   88 (206)
                      ++.+.+.+++|||++++++++..|++||+|+|++||+||||+|+|.+++.++.++|.+.+| +++|++|+||||+|+|++
T Consensus         2 ~~~~~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~nptGS~K~R~a~~~l~~a~~~g~~~~g-~~vv~~ssGN~g~alA~~   80 (454)
T TIGR01137         2 RDNIIDLIGNTPLVRLNKVSKGIKCELLAKCEFFNPGGSVKDRIALRMIEDAEASGRLKPG-DTIIEPTSGNTGIGLALV   80 (454)
T ss_pred             ccchHHhcCCCceEEccccCCCCCceEEEEEhhcCCCcchHHHHHHHHHHHHHHcCCCCCC-CEEEEeCCcHHHHHHHHH
Confidence            4567888999999999999988888999999999999999999999999999999988877 579999999999999999


Q ss_pred             HHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChH---HHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHH
Q 028618           89 AAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMK---GAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTG  165 (206)
Q Consensus        89 a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~---~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~  165 (206)
                      |+.+|++|++|||+++++.|+++++.+||+|+.++.+..++   ...+.+.+++++.++.+|++||+|+.++..||.+++
T Consensus        81 a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~t~~  160 (454)
T TIGR01137        81 AAIKGYKCIIVLPEKMSNEKVDVLKALGAEIVRTPTAAAFDSPESHIGVAKRLVREIPGAHILDQYNNPSNPLAHYDGTG  160 (454)
T ss_pred             HHHcCCeEEEEeCCCcCHHHHHHHHHCCCEEEEcCCccCCCchHHHHHHHHHHHHhCCCcEecccCCChhhHHHHHHhhH
Confidence            99999999999999999999999999999999998642122   235667778777556788999999999878999999


Q ss_pred             HHHHhhhCCCCCEEEEccCcchHHHHHHHHHHhcCCCCeEC
Q 028618          166 PELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKVR  206 (206)
Q Consensus       166 ~Ei~~q~~~~~d~vv~~vG~Gg~~aGi~~~~k~~~p~~~vi  206 (206)
                      .||++|+++.||+||+|+|||||++|++.+||+.+|++|||
T Consensus       161 ~Ei~~q~~~~~d~vv~~vG~Gg~~~G~~~~~~~~~~~~~vi  201 (454)
T TIGR01137       161 PEILEQCEGKLDMFVAGAGTGGTITGIARYLKESNPKCRIV  201 (454)
T ss_pred             HHHHHHhCCCCCEEEEecCchHHHHHHHHHHHhhCCCCEEE
Confidence            99999997679999999999999999999999999999986

Members of this family closely resemble cysteine synthase but contain an additional C-terminal CBS domain. The function of any bacterial member included in this family is proposed but not proven.

>PRK07048 serine/threonine dehydratase; Validated

Probab=100.00  E-value=1.8e-48  Score=330.40  Aligned_cols=193  Identities=20%  Similarity=0.264  Sum_probs=177.3

Q ss_pred             ccchhhhhhccccCCcceecccccCCCCceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHH
Q 028618            5 SSNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIG   84 (206)
Q Consensus         5 ~~~~~~~i~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~a   84 (206)
                      ....++++..++++|||++++++++..|++||+|+|++|||||||+|++.+++.++.+++.    .++||++|+||||+|
T Consensus        11 i~~a~~~i~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~nptGS~K~R~a~~~i~~~~~~~~----~~~vv~aSsGN~g~a   86 (321)
T PRK07048         11 VAAAAARLAGVAHRTPVLTSRTADARTGAQVFFKCENFQRMGAFKFRGAYNALSQFSPEQR----RAGVVTFSSGNHAQA   86 (321)
T ss_pred             HHHHHHHhhCCCCCCCCccchhhHHhcCCeEEEEeccCCCCCCeeHHHHHHHHHhhhHhhc----CCcEEEeCCCHHHHH
Confidence            3456788999999999999999988888999999999999999999999999998875432    157999999999999


Q ss_pred             HHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhH
Q 028618           85 LAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETT  164 (206)
Q Consensus        85 lA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~  164 (206)
                      +|++|+.+|++|++|||+++++.|+++++.+||+|+.++.+  ++++.+.+++++++. +++|++||+|+++ ..||+|+
T Consensus        87 lA~~a~~~G~~~~vvvp~~~~~~k~~~~~~~GAeV~~~~~~--~~~~~~~a~~l~~~~-g~~~~~~~~~~~~-~~g~~t~  162 (321)
T PRK07048         87 IALSARLLGIPATIVMPQDAPAAKVAATRGYGGEVVTYDRY--TEDREEIGRRLAEER-GLTLIPPYDHPHV-IAGQGTA  162 (321)
T ss_pred             HHHHHHHcCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCC--HHHHHHHHHHHHHhc-CCEEECCCCCcch-hhccchH
Confidence            99999999999999999999999999999999999999976  678888899998886 7899999999988 6899999


Q ss_pred             HHHHHhhhCCCCCEEEEccCcchHHHHHHHHHHhcCCCCeEC
Q 028618          165 GPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKVR  206 (206)
Q Consensus       165 ~~Ei~~q~~~~~d~vv~~vG~Gg~~aGi~~~~k~~~p~~~vi  206 (206)
                      ++||++|++ .||+||+|+|+||+++|++.++|+.+|+++||
T Consensus       163 ~~EI~~q~~-~~D~vv~~vGtGG~~~Gi~~~~k~~~~~~~vi  203 (321)
T PRK07048        163 AKELFEEVG-PLDALFVCLGGGGLLSGCALAARALSPGCKVY  203 (321)
T ss_pred             HHHHHhhcC-CCCEEEEecChhHHHHHHHHHHHHhCCCCEEE
Confidence            999999995 79999999999999999999999999999986

>PRK06110 hypothetical protein; Provisional

Probab=100.00  E-value=2.3e-48  Score=329.80  Aligned_cols=192  Identities=23%  Similarity=0.268  Sum_probs=176.3

Q ss_pred             cchhhhhhccccCCcceecccccCCCCceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHH
Q 028618            6 SNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGL   85 (206)
Q Consensus         6 ~~~~~~i~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~al   85 (206)
                      ...++++...+++|||++++++++.+|.+||+|+|++||+||||+|++.+++..+.+++...   ..+|++|+||||+|+
T Consensus         9 ~~a~~~i~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~nptGS~K~Rga~~~l~~a~~~~~~~---~~vv~aSsGN~g~al   85 (322)
T PRK06110          9 EAAAAVVYAAMPPTPQYRWPLLAERLGCEVWVKHENHTPTGAFKVRGGLVYFDRLARRGPRV---RGVISATRGNHGQSV   85 (322)
T ss_pred             HHHHHHHhCcCcCCCcccchhHHHHhCCeEEEEeccCCCcCCcHHHHHHHHHHHhhhhcCCC---ceEEEECCCHHHHHH
Confidence            44677889999999999999999888899999999999999999999999999998876543   469999999999999


Q ss_pred             HHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHH
Q 028618           86 AFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTG  165 (206)
Q Consensus        86 A~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~  165 (206)
                      |++|+++|++|+||||.+.++.|+++++.+||+|+.++.+  ++++.+.+.+++++. +++|+++| |+.+ ..||.|++
T Consensus        86 A~~a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~~--~~~~~~~a~~~~~~~-~~~~~~~~-~~~~-~~G~~t~~  160 (322)
T PRK06110         86 AFAARRHGLAATIVVPHGNSVEKNAAMRALGAELIEHGED--FQAAREEAARLAAER-GLHMVPSF-HPDL-VRGVATYA  160 (322)
T ss_pred             HHHHHHcCCCEEEEEcCCCCHHHHHHHHHcCCEEEEECCC--HHHHHHHHHHHHHhc-CCEEcCCC-CChH-HhccchHH
Confidence            9999999999999999999999999999999999999865  788999999998886 78999998 5666 57999999


Q ss_pred             HHHHhhhCCCCCEEEEccCcchHHHHHHHHHHhcCCCCeEC
Q 028618          166 PELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKVR  206 (206)
Q Consensus       166 ~Ei~~q~~~~~d~vv~~vG~Gg~~aGi~~~~k~~~p~~~vi  206 (206)
                      .||++|++ .+|+||+|+|+||+++|++.+||+.+|++|||
T Consensus       161 ~Ei~~q~~-~~D~vv~pvG~Gg~~~Gv~~~~k~~~~~~~vi  200 (322)
T PRK06110        161 LELFRAVP-DLDVVYVPIGMGSGICGAIAARDALGLKTRIV  200 (322)
T ss_pred             HHHHhhCC-CCCEEEEecCHHHHHHHHHHHHHHhCCCCEEE
Confidence            99999995 79999999999999999999999999999986

>PRK08638 threonine dehydratase; Validated

Probab=100.00  E-value=2.2e-48  Score=330.78  Aligned_cols=192  Identities=24%  Similarity=0.342  Sum_probs=177.1

Q ss_pred             cchhhhhhccccCCcceecccccCCCCceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHH
Q 028618            6 SNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGL   85 (206)
Q Consensus         6 ~~~~~~i~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~al   85 (206)
                      ...++++.+.+++|||+++++|++..|++||+|+|++|||||||||++.+++..+.++..    ..+|+++|+||||.|+
T Consensus        15 ~~a~~~i~~~i~~TPlv~~~~l~~~~g~~i~~K~E~~nptGS~KdR~a~~~i~~~~~~~~----~~~vv~~SsGN~g~al   90 (333)
T PRK08638         15 IEAKQRLAGRIRKTPLPRSNYLSERCKGEIFLKLENMQRTGSFKIRGAFNKLSSLTDAEK----RKGVVACSAGNHAQGV   90 (333)
T ss_pred             HHHHHHhhCcCcCCCceechhhHHhhCCeEEEEeccCCccCCcHHHHHHHHHHhccHHhc----CCeEEEeCCcHHHHHH
Confidence            346788999999999999999988888999999999999999999999999988765332    1479999999999999


Q ss_pred             HHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHH
Q 028618           86 AFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTG  165 (206)
Q Consensus        86 A~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~  165 (206)
                      |++|+.+|++|+||||++.++.|+++++.+||+|+.++.+  ++++.+.+++++++. +++|++||+||.+ ..||.|++
T Consensus        91 A~~aa~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~--~~~~~~~a~~~a~~~-g~~~~~~~~~~~~-~~g~~t~a  166 (333)
T PRK08638         91 ALSCALLGIDGKVVMPKGAPKSKVAATCGYGAEVVLHGDN--FNDTIAKVEEIVEEE-GRTFIPPYDDPKV-IAGQGTIG  166 (333)
T ss_pred             HHHHHHcCCCEEEEeCCCCcHHHHHHHHHcCCEEEEECcC--HHHHHHHHHHHHHhc-CCEEcCcCCCcch-hccccHHH
Confidence            9999999999999999999999999999999999999876  788999999999886 7899999999998 68999999


Q ss_pred             HHHHhhhCCCCCEEEEccCcchHHHHHHHHHHhcCCCCeEC
Q 028618          166 PELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKVR  206 (206)
Q Consensus       166 ~Ei~~q~~~~~d~vv~~vG~Gg~~aGi~~~~k~~~p~~~vi  206 (206)
                      +||++|+ +++|+||+|+|+||+++|++.+||+.+|++|||
T Consensus       167 ~Ei~~q~-~~~d~vv~~vG~Gg~~~Gv~~~lk~~~~~~~vi  206 (333)
T PRK08638        167 LEILEDL-WDVDTVIVPIGGGGLIAGIAVALKSINPTIHII  206 (333)
T ss_pred             HHHHhhc-CCCCEEEEEeChhHHHHHHHHHHHHhCCCCEEE
Confidence            9999999 569999999999999999999999999999986

>cd06447 D-Ser-dehyd D-Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- or D-serine to pyruvate and ammonia

Probab=100.00  E-value=2.7e-48  Score=335.84  Aligned_cols=188  Identities=22%  Similarity=0.266  Sum_probs=170.2

Q ss_pred             ccCCcceecccccCCCC--------ceEEEEeCCCCC-CCChhhHHHHHHHHH-----HHHcCCCCCCC-----------
Q 028618           16 IGNTPLVYLNNIVNGCV--------ARIAAKLEMMEP-CSSVKDRIGYSMISD-----AEAKGLITPGE-----------   70 (206)
Q Consensus        16 ~~~TPl~~~~~l~~~~g--------~~i~~K~E~~~p-tGS~K~R~a~~~~~~-----a~~~g~~~~~~-----------   70 (206)
                      +++|||++++++++.+|        .+||+|+|++|| |||||||++.+++..     +.+.|.+.|+.           
T Consensus        50 ~~~TPLv~~~~ls~~~g~~~~~~~~~~v~~K~E~~nP~tGSfKdRgA~~~i~~l~~~~a~~~G~l~pg~~~~~~~~~~~~  129 (404)
T cd06447          50 IIESPLLPIPRMKQALEKLYHQPIKGRLLLKADSHLPISGSIKARGGIYEVLKHAEKLALEHGLLTLEDDYSKLASEKFR  129 (404)
T ss_pred             ccCCCceehHHHHHHhccccccCcCceEEEEecCCCCCCCChHHHHHHHHHHHHhHHHHHHhCCCCcccchhhhhhhhhh
Confidence            99999999999887654        799999999999 999999999999864     77888887764           


Q ss_pred             -----eEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCe
Q 028618           71 -----SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNA  145 (206)
Q Consensus        71 -----~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~  145 (206)
                           ++||++|+||||+|+|++|+.+|++|+||||+++++.|++.++.+||+|+.++.+  ++++.+.+++++++.+++
T Consensus       130 ~~~~~~~VV~aSsGN~G~alA~~a~~~G~~~~IvvP~~~~~~K~~~ira~GAeVv~v~~~--~~~a~~~a~~la~~~~~~  207 (404)
T cd06447         130 KLFSQYSIAVGSTGNLGLSIGIMAAALGFKVTVHMSADAKQWKKDKLRSKGVTVVEYETD--YSKAVEEGRKQAAADPMC  207 (404)
T ss_pred             hcccCCEEEEECccHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHCCCEEEEECCC--HHHHHHHHHHHHHHCCCe
Confidence                 4899999999999999999999999999999999999999999999999999976  789999999999987678


Q ss_pred             EEcCCCCCCccHHHHHHhHHHHHHhhhCC---C-----CCEEEEccCcchHHHHHHHHHHhc-CCCCeEC
Q 028618          146 YMLQQFENPANPKIHYETTGPELWKGSGG---R-----IDALVSGIGTGGTITGAGKFLKEK-NPNIKVR  206 (206)
Q Consensus       146 ~~~~~~~~~~~~~~g~~t~~~Ei~~q~~~---~-----~d~vv~~vG~Gg~~aGi~~~~k~~-~p~~~vi  206 (206)
                      +|++|+++++. ++||+|+++||++|+++   .     ||+||+|+|+||+++|++++||+. +|+++||
T Consensus       208 ~~v~~~n~~~~-iaG~~T~g~EI~eQl~~~~~~vD~~~Pd~VvvpvG~GGli~GIa~~lK~~~~p~~kVi  276 (404)
T cd06447         208 YFVDDENSRDL-FLGYAVAASRLKAQLAELGIKVDAEHPLFVYLPCGVGGAPGGVAFGLKLIFGDNVHCF  276 (404)
T ss_pred             EeCCCCCchhH-HhhHHHHHHHHHHHhhhccCccccCCCCEEEEecCccHHHHHHHHHHHHhcCCCCEEE
Confidence            89999666655 88999999999999952   2     568999999999999999999997 7999885

D-serine dehydratase serves as a detoxifying enzyme in most E. coli strains where D-serine is a competitive antagonist of beta-alanine in the biosynthetic pathway to pentothenate and coenzyme A. D-serine dehydratase is different from other pyridoxal-5'-phosphate-dependent enzymes in that it catalyzes alpha, beta-elimination reactions on amino acids.

>PLN02550 threonine dehydratase

Probab=100.00  E-value=3.2e-48  Score=346.80  Aligned_cols=188  Identities=22%  Similarity=0.338  Sum_probs=174.6

Q ss_pred             hhhccccCCcceecccccCCCCceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHHH
Q 028618           11 DVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAA   90 (206)
Q Consensus        11 ~i~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~alA~~a~   90 (206)
                      ++++.+.+|||+++++|++.+|++||+|+|++||+||||+|++.+.+..+.++.. .   ++||++|+||||+++|++|+
T Consensus       102 ~v~~~i~~TPL~~s~~LS~~~g~~IylK~E~lqptGSFK~RGA~n~I~~L~~e~~-~---~GVV~aSaGNhAqgvA~aA~  177 (591)
T PLN02550        102 KVYDVAIESPLQLAKKLSERLGVKVLLKREDLQPVFSFKLRGAYNMMAKLPKEQL-D---KGVICSSAGNHAQGVALSAQ  177 (591)
T ss_pred             hhhccccCChhhhhHHhhHhhCCEEEEEEcCCCCCCcHHHHHHHHHHHHHHHhcC-C---CCEEEECCCHHHHHHHHHHH
Confidence            4568899999999999999999999999999999999999999999998854432 2   46999999999999999999


Q ss_pred             HCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHHHHHHh
Q 028618           91 AKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWK  170 (206)
Q Consensus        91 ~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~  170 (206)
                      ++|++|+||||++++..|++.++.+||+|++++.+  ++++.+.+.+++++. +++|++||+|+.+ ++||+|+|.||++
T Consensus       178 ~lGika~IvmP~~tp~~Kv~~~r~~GAeVvl~g~~--~dea~~~A~~la~e~-g~~fi~pfddp~v-iaGqgTig~EI~e  253 (591)
T PLN02550        178 RLGCDAVIAMPVTTPEIKWQSVERLGATVVLVGDS--YDEAQAYAKQRALEE-GRTFIPPFDHPDV-IAGQGTVGMEIVR  253 (591)
T ss_pred             HcCCCEEEEECCCCCHHHHHHHHHcCCEEEEeCCC--HHHHHHHHHHHHHhc-CCEEECCCCChHH-HHHHHHHHHHHHH
Confidence            99999999999999999999999999999999976  889999999999885 7899999999998 6899999999999


Q ss_pred             hhCCCCCEEEEccCcchHHHHHHHHHHhcCCCCeEC
Q 028618          171 GSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKVR  206 (206)
Q Consensus       171 q~~~~~d~vv~~vG~Gg~~aGi~~~~k~~~p~~~vi  206 (206)
                      |+++.+|+||+|+|+||+++|++.++|+.+|++|||
T Consensus       254 Ql~~~~D~VvvpVGgGGLiaGia~~lK~l~p~vkVI  289 (591)
T PLN02550        254 QHQGPLHAIFVPVGGGGLIAGIAAYVKRVRPEVKII  289 (591)
T ss_pred             HcCCCCCEEEEEeChhHHHHHHHHHHHHhCCCCEEE
Confidence            996569999999999999999999999999999996

>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]

Probab=100.00  E-value=7.4e-49  Score=323.25  Aligned_cols=203  Identities=69%  Similarity=1.082  Sum_probs=193.2

Q ss_pred             cccchhhhhhccccCCcceecccccCCCCceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHH
Q 028618            4 ESSNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGI   83 (206)
Q Consensus         4 ~~~~~~~~i~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~   83 (206)
                      ++..+.+.+.+.+|+|||+.+......+.++|++|+|.+||+||.|||.++.|+.+|+.+|.+.||+.+++++||||+|.
T Consensus        38 ~~~~~~~~~~~liG~TPlv~ln~i~~g~~~~i~~K~E~~~p~~SvKdRia~sMi~~Ae~~G~i~pg~stliEpTSGNtGi  117 (362)
T KOG1252|consen   38 ERILILWDVRDLIGNTPLVKLNKIAGGCVARIAAKLEYMNPGGSVKDRIAWSMIEDAEKKGLITPGKSTLIEPTSGNTGI  117 (362)
T ss_pred             hhhhhhhhHHHHhCCCceEEeccccCCccceEEEEeeecCCcccHHHHHHHHHHHHHHHcCCccCCceEEEecCCCchHH
Confidence            44556778899999999999999988888999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHH---HHHHHHHHHHhCCCeEEcCCCCCCccHHHH
Q 028618           84 GLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKG---AVQKAEEILAKTPNAYMLQQFENPANPKIH  160 (206)
Q Consensus        84 alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~---~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g  160 (206)
                      +||++|+..|++|+++||++.+.+|+..++++|++|+.+|....+..   +...+.++..+.|+.+.++||.||.||..|
T Consensus       118 gLA~~~a~~Gyk~i~tmP~~ms~Ek~~~l~a~Gaeii~tp~a~~~~~~e~ai~~a~~l~~~~pna~~l~Qf~np~Np~~h  197 (362)
T KOG1252|consen  118 GLAYMAALRGYKCIITMPEKMSKEKRILLRALGAEIILTPPAAGMKGPESAIGKAEELLNKTPNAYILDQFHNPGNPLAH  197 (362)
T ss_pred             HHHHHHHHcCceEEEEechhhhHHHHHHHHHcCCEEEecChHHccCChHHHHHHHHHHHHhCCChHHHHHhcCCCCcccc
Confidence            99999999999999999999999999999999999999997755555   889999999999999999999999999999


Q ss_pred             HHhHHHHHHhhhCCCCCEEEEccCcchHHHHHHHHHHhcCCCCeEC
Q 028618          161 YETTGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKVR  206 (206)
Q Consensus       161 ~~t~~~Ei~~q~~~~~d~vv~~vG~Gg~~aGi~~~~k~~~p~~~vi  206 (206)
                      |.++++||++|+.+.+|.+|.++|||||++|+.+++|+.+|+++|+
T Consensus       198 y~ttg~EI~~q~~g~vDi~V~gaGTGGTitgvGRylke~~~~~kVv  243 (362)
T KOG1252|consen  198 YETTGPEIWRQLDGKVDIFVAGAGTGGTITGVGRYLKEQNPNIKVV  243 (362)
T ss_pred             cccccHHHHHHhcCCCCEEEeccCCCceeechhHHHHHhCCCCEEE
Confidence            9999999999998899999999999999999999999999999985

>TIGR01124 ilvA_2Cterm threonine ammonia-lyase, biosynthetic, long form

Probab=100.00  E-value=8.9e-48  Score=341.41  Aligned_cols=189  Identities=26%  Similarity=0.356  Sum_probs=175.6

Q ss_pred             hhhhccccCCcceecccccCCCCceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHH
Q 028618           10 KDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMA   89 (206)
Q Consensus        10 ~~i~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~alA~~a   89 (206)
                      .++++.+.+|||+++++|++.+|++||+|+|++||+||||+|+|.+++..+.++..    .++||++|+||||+++|++|
T Consensus         9 ~~v~~~i~~TPL~~~~~Ls~~~g~~i~lK~E~lqptgSfK~RgA~n~i~~l~~~~~----~~gVV~aSaGNha~~vA~aa   84 (499)
T TIGR01124         9 ARVYEAAQETPLQKAAKLSERLGNRILIKREDLQPVFSFKLRGAYNKMAQLSPEQK----ARGVIAASAGNHAQGVAFSA   84 (499)
T ss_pred             hHhhCccCCCCeeehHHHHHHhCCEEEEEecCCCCCCCCHHHHHHHHHHHhhHHhc----CCEEEEECCCHHHHHHHHHH
Confidence            47888999999999999999899999999999999999999999999988743322    15799999999999999999


Q ss_pred             HHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHHHHHH
Q 028618           90 AAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELW  169 (206)
Q Consensus        90 ~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~  169 (206)
                      +++|++|+||||++++..|++.++.+||+|+.++.+  ++++.+.+.+++++. +++|++||+||.+ ++|++|+|.||+
T Consensus        85 ~~~Gi~~~IvmP~~tp~~Kv~~~r~~GA~Vvl~g~~--~d~a~~~a~~la~~~-g~~~i~p~~~~~~-i~G~gtig~EI~  160 (499)
T TIGR01124        85 ARLGLKALIVMPETTPDIKVDAVRGFGGEVVLHGAN--FDDAKAKAIELSQEK-GLTFIHPFDDPLV-IAGQGTLALEIL  160 (499)
T ss_pred             HHcCCCEEEEECCCCCHHHHHHHHhCCCEEEEeCcC--HHHHHHHHHHHHHhc-CCEeeCCCCChHH-HHhhHHHHHHHH
Confidence            999999999999999999999999999999999876  889999999999886 7899999999998 789999999999


Q ss_pred             hhhCCCCCEEEEccCcchHHHHHHHHHHhcCCCCeEC
Q 028618          170 KGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKVR  206 (206)
Q Consensus       170 ~q~~~~~d~vv~~vG~Gg~~aGi~~~~k~~~p~~~vi  206 (206)
                      +|++..+|+||+|+|+||+++|++.++|+.+|++|||
T Consensus       161 ~q~~~~~D~vvvpvGgGGliaGia~~lk~~~p~~kVI  197 (499)
T TIGR01124       161 RQVANPLDAVFVPVGGGGLAAGVAALIKQLMPEIKVI  197 (499)
T ss_pred             HhCCCCCCEEEEccCccHHHHHHHHHHHHhCCCCEEE
Confidence            9996679999999999999999999999999999986

Forms scoring between the trusted and noise cutoff tend to branch with this subgroup of threonine ammonia-lyase phylogenetically but have only a single copy of the C-terminal domain.

>KOG1250 consensus Threonine/serine dehydratases [Amino acid transport and metabolism]

Probab=100.00  E-value=3e-48  Score=324.59  Aligned_cols=192  Identities=21%  Similarity=0.246  Sum_probs=180.3

Q ss_pred             chhhhhhccccCCcceecccccCCCCceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHH
Q 028618            7 NIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLA   86 (206)
Q Consensus         7 ~~~~~i~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~alA   86 (206)
                      ..+..++..+..|||.+.-.|++.+|.++|+|+|++||+||||.||+.|++..+-++++    ..+++++|.||||+|+|
T Consensus        55 ~~~~~i~~~~~~TPl~~s~~lS~~~g~~vyLK~E~lQpsgSFK~RGa~~~~~kla~~~~----~~gViasSaGNha~a~A  130 (457)
T KOG1250|consen   55 SAHFKIYPVIVETPLLKSVALSKKAGMPVYLKREDLQPSGSFKIRGAGNALQKLAKQQK----KAGVIASSAGNHAQAAA  130 (457)
T ss_pred             hhhhccccceecccchhhhhhhhhcCCceEEEehhcccccceehhhHHHHHHHHHHhhh----cCceEEecCccHHHHHH
Confidence            34566888999999999989999999999999999999999999999999998877764    26799999999999999


Q ss_pred             HHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHHH
Q 028618           87 FMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGP  166 (206)
Q Consensus        87 ~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~  166 (206)
                      ++|+++|+|++||||..+|.-|++.++.+||+|++.+.+  ++++...|.++++++ ++.|++|||+|+. .+|++|++.
T Consensus       131 yaa~~LgipaTIVmP~~tp~~kiq~~~nlGA~Vil~G~~--~deAk~~a~~lAke~-gl~yI~pfDhP~I-~aGqgTig~  206 (457)
T KOG1250|consen  131 YAARKLGIPATIVMPVATPLMKIQRCRNLGATVILSGED--WDEAKAFAKRLAKEN-GLTYIPPFDHPDI-WAGQGTIGL  206 (457)
T ss_pred             HHHHhcCCceEEEecCCChHHHHHHHhccCCEEEEeccc--HHHHHHHHHHHHHhc-CceecCCCCCchh-hcCcchHHH
Confidence            999999999999999999999999999999999999998  889999999999998 8999999999999 589999999


Q ss_pred             HHHhhhCCCCCEEEEccCcchHHHHHHHHHHhcCCCCeEC
Q 028618          167 ELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKVR  206 (206)
Q Consensus       167 Ei~~q~~~~~d~vv~~vG~Gg~~aGi~~~~k~~~p~~~vi  206 (206)
                      ||++|++.++++|+||||+||+++||+.|+|+..|+++||
T Consensus       207 EIl~ql~~~~~AI~vpVGGGGLiaGIat~vk~~~p~vkII  246 (457)
T KOG1250|consen  207 EILEQLKEPDGAIVVPVGGGGLIAGIATGVKRVGPHVKII  246 (457)
T ss_pred             HHHHhhcCCCCeEEEecCCchhHHHHHHHHHHhCCCCceE
Confidence            9999997666799999999999999999999999999997

>PRK08639 threonine dehydratase; Validated

Probab=100.00  E-value=3.1e-48  Score=339.28  Aligned_cols=192  Identities=25%  Similarity=0.365  Sum_probs=173.7

Q ss_pred             chhhhhhccccCCcceecccccCCCCceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHH
Q 028618            7 NIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLA   86 (206)
Q Consensus         7 ~~~~~i~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~alA   86 (206)
                      ..++++.+.+++|||++++++++..|++||+|+|++|||||||+|+|.+++..+.+...    .++||++|+||||+++|
T Consensus        14 ~a~~~i~~~i~~TPl~~~~~ls~~~g~~l~~K~E~~~ptGSfK~RgA~~~i~~l~~~~~----~~~Vv~aSsGN~g~alA   89 (420)
T PRK08639         14 KAAKRLKDVVPETPLQRNDYLSEKYGANVYLKREDLQPVRSYKLRGAYNAISQLSDEEL----AAGVVCASAGNHAQGVA   89 (420)
T ss_pred             HHHHHHhCcCcCCCccchHHHHHHhCCEEEEEecCCCCCCCcHHHHHHHHHHhCCHHhh----CCEEEEECccHHHHHHH
Confidence            46678999999999999999998889999999999999999999999999988533221    25799999999999999


Q ss_pred             HHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEE---EEeCCCCChHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHh
Q 028618           87 FMAAAKQYRLIITMPASMSLERRIILRAFGAEL---VLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYET  163 (206)
Q Consensus        87 ~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v---~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t  163 (206)
                      ++|+++|++|+||||+++++.|++.++.+||+|   +.++.+  ++++.+.+.+++++. +++|++||+|+.+ ++||+|
T Consensus        90 ~~a~~~G~~~~IvmP~~~~~~k~~~~r~~GA~vv~v~~~g~~--~~~a~~~a~~~a~~~-g~~~~~~~~~~~~-~~G~~t  165 (420)
T PRK08639         90 YACRHLGIPGVIFMPVTTPQQKIDQVRFFGGEFVEIVLVGDT--FDDSAAAAQEYAEET-GATFIPPFDDPDV-IAGQGT  165 (420)
T ss_pred             HHHHHcCCCEEEEECCCChHHHHHHHHHcCCCeeEEEEeCcC--HHHHHHHHHHHHHhc-CCcccCCCCChhH-hcchhH
Confidence            999999999999999999999999999999974   444444  889999999999886 7999999999998 689999


Q ss_pred             HHHHHHhhhCCC--CCEEEEccCcchHHHHHHHHHHhcCCCCeEC
Q 028618          164 TGPELWKGSGGR--IDALVSGIGTGGTITGAGKFLKEKNPNIKVR  206 (206)
Q Consensus       164 ~~~Ei~~q~~~~--~d~vv~~vG~Gg~~aGi~~~~k~~~p~~~vi  206 (206)
                      +|.||++|+++.  ||+||+|+|+||+++|++.++|+.+|++|||
T Consensus       166 ig~EI~eq~~~~~~~D~vv~~vG~GG~~aGva~~~k~~~p~~~vi  210 (420)
T PRK08639        166 VAVEILEQLEKEGSPDYVFVPVGGGGLISGVTTYLKERSPKTKII  210 (420)
T ss_pred             HHHHHHHhccccCCCCEEEEecChhHHHHHHHHHHHHhCCCCEEE
Confidence            999999999655  9999999999999999999999999999986

>PRK06608 threonine dehydratase; Provisional

Probab=100.00  E-value=8.3e-48  Score=327.86  Aligned_cols=193  Identities=19%  Similarity=0.216  Sum_probs=176.5

Q ss_pred             ccchhhhhhccccCCcceecccccCCCCceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHH
Q 028618            5 SSNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIG   84 (206)
Q Consensus         5 ~~~~~~~i~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~a   84 (206)
                      ....++++.+.+++|||+++++|++..|++||+|+|++||+||||+|++.+++.++.++|.+.   ++||++|+||||+|
T Consensus        10 i~~A~~~i~~~i~~TPl~~~~~l~~~~g~~l~~K~E~~nptGS~K~R~a~~~v~~a~~~g~~~---~~vv~~SsGN~g~a   86 (338)
T PRK06608         10 IAAAHNRIKQYLHLTPIVHSESLNEMLGHEIFFKVESLQKTGAFKVRGVLNHLLELKEQGKLP---DKIVAYSTGNHGQA   86 (338)
T ss_pred             HHHHHHHHhCcCcCCCccchHhHHHHhCCEEEEEeCCCCCCCCcHHHHHHHHHHHhhhhcCcC---CeEEEECCCHHHHH
Confidence            345677899999999999999999988999999999999999999999999999999988753   47999999999999


Q ss_pred             HHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhH
Q 028618           85 LAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETT  164 (206)
Q Consensus        85 lA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~  164 (206)
                      +|++|+.+|++|++|||+++++.|+++++.+||+|+.++.   .+++.+.+++ +++ +++||++||+|+.+ ..||+|+
T Consensus        87 lA~~a~~~G~~~~vv~p~~~~~~k~~~l~~~GA~V~~~~~---~~~~~~~a~~-~~~-~~~~~~~~~~~~~~-~~g~~t~  160 (338)
T PRK06608         87 VAYASKLFGIKTRIYLPLNTSKVKQQAALYYGGEVILTNT---RQEAEEKAKE-DEE-QGFYYIHPSDSDST-IAGAGTL  160 (338)
T ss_pred             HHHHHHHcCCCEEEEECCCCCHHHHHHHHhCCCEEEEECC---HHHHHHHHHH-HHh-CCCEEcCCCCCHHH-hccHHHH
Confidence            9999999999999999999999999999999999999974   3567777777 444 58999999999998 5799999


Q ss_pred             HHHHHhhhCCCCCEEEEccCcchHHHHHHHHHHhcCCCCeEC
Q 028618          165 GPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKVR  206 (206)
Q Consensus       165 ~~Ei~~q~~~~~d~vv~~vG~Gg~~aGi~~~~k~~~p~~~vi  206 (206)
                      +.||++|++..||+||+|+|+||+++|++.++|+.+|+++||
T Consensus       161 a~Ei~~q~~~~~D~vv~~vG~GGt~~Gi~~~~k~~~~~~~vi  202 (338)
T PRK06608        161 CYEALQQLGFSPDAIFASCGGGGLISGTYLAKELISPTSLLI  202 (338)
T ss_pred             HHHHHHhcCCCcCEEEEeechhHHHHHHHHHHHhcCCCCEEE
Confidence            999999997689999999999999999999999999999986

>TIGR02079 THD1 threonine dehydratase

Probab=100.00  E-value=6.9e-48  Score=335.82  Aligned_cols=193  Identities=22%  Similarity=0.329  Sum_probs=174.4

Q ss_pred             cchhhhhhccccCCcceecccccCCCCceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHH
Q 028618            6 SNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGL   85 (206)
Q Consensus         6 ~~~~~~i~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~al   85 (206)
                      ...++++...+++|||+++++|++..|.+||+|+|++|||||||+|+|.+++..+.+... .   +++|++|+||||+++
T Consensus         4 ~~a~~~i~~~i~~TPl~~~~~ls~~~g~~iy~K~E~~~ptGSfK~RgA~~~i~~l~~~~~-~---~gvv~aSsGN~g~a~   79 (409)
T TIGR02079         4 EAARKRLKEVVPHTPLQLNERLSEKYGANIYLKREDLQPVRSYKIRGAYNFLKQLSDAQL-A---KGVVCASAGNHAQGF   79 (409)
T ss_pred             HHHHHHHhCcCCCCCccccHHHHHHhCCEEEEEecCCCCCCCcHHHHHHHHHHhCCHHhh-C---CEEEEECccHHHHHH
Confidence            346778999999999999999998889999999999999999999999999987543222 1   479999999999999


Q ss_pred             HHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCE---EEEeCCCCChHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHH
Q 028618           86 AFMAAAKQYRLIITMPASMSLERRIILRAFGAE---LVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYE  162 (206)
Q Consensus        86 A~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~---v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~  162 (206)
                      |++|+++|++|++|||+++++.|++.++.+||+   |+.++.+  ++++.+.+.+++++. +++|++||+||.+ ..||+
T Consensus        80 A~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~vv~v~~~g~~--~~~a~~~a~~~~~~~-g~~~~~~~~~~~~-~~g~~  155 (409)
T TIGR02079        80 AYACRHLGVHGTVFMPATTPKQKIDRVKIFGGEFIEIILVGDT--FDQCAAAAREHVEDH-GGTFIPPFDDPRI-IEGQG  155 (409)
T ss_pred             HHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCCeeEEEEeCCC--HHHHHHHHHHHHHhc-CCEEeCCCCCHhH-hhhhH
Confidence            999999999999999999999999999999997   4445544  889999999999886 7899999999998 68999


Q ss_pred             hHHHHHHhhhCCCCCEEEEccCcchHHHHHHHHHHhcCCCCeEC
Q 028618          163 TTGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKVR  206 (206)
Q Consensus       163 t~~~Ei~~q~~~~~d~vv~~vG~Gg~~aGi~~~~k~~~p~~~vi  206 (206)
                      |++.||++|++..||+||+|+|+||+++|++.+||+.+|++|||
T Consensus       156 ti~~Ei~~q~~~~~D~vv~pvG~GG~~~Gia~~~k~~~p~~~vi  199 (409)
T TIGR02079       156 TVAAEILDQLPEKPDYVVVPVGGGGLISGLTTYLAGTSPKTKII  199 (409)
T ss_pred             HHHHHHHHhcCCCCCEEEEEecHhHHHHHHHHHHHHhCCCCEEE
Confidence            99999999997679999999999999999999999999999986

This model represents threonine dehydratase, the first step in the pathway converting threonine into isoleucine. At least two other clades of biosynthetic threonine dehydratases have been characterized by models TIGR01124 and TIGR01127. Those sequences described by this model are exclusively found in species containg the rest of the isoleucine pathway and which are generally lacking in members of the those other two clades of threonine dehydratases. Members of this clade are also often gene clustered with other elements of the isoleucine pathway.

>TIGR01127 ilvA_1Cterm threonine dehydratase, medium form

Probab=100.00  E-value=9.7e-48  Score=332.71  Aligned_cols=179  Identities=23%  Similarity=0.353  Sum_probs=169.4

Q ss_pred             CcceecccccCCCCceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEE
Q 028618           19 TPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLII   98 (206)
Q Consensus        19 TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~i   98 (206)
                      |||++++++++..|++||+|+|++|||||||+|+|.+++.++.+++..    +++|++|+||||+++|++|+++|++|++
T Consensus         1 TPl~~~~~ls~~~g~~i~~K~E~~~ptgS~K~R~a~~~i~~~~~~~~~----~~vv~aSsGN~g~alA~~a~~~G~~~~i   76 (380)
T TIGR01127         1 TPLIYSTTLSDITGSEVYLKLENLQKTGSFKIRGALNKIANLSEDQRQ----RGVVAASAGNHAQGVAYAAKKFGIKAVI   76 (380)
T ss_pred             CCceehHHHHHHhCCeEEEEecCCCCCCCcHHHHHHHHHHhcchhccC----CEEEEECCCHHHHHHHHHHHHcCCCEEE
Confidence            899999999998899999999999999999999999999999888763    4799999999999999999999999999


Q ss_pred             EeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHHHHHHhhhCCCCCE
Q 028618           99 TMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDA  178 (206)
Q Consensus        99 vvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~q~~~~~d~  178 (206)
                      |||++++..|++.++.+||+|++++.+  ++++.+.+++++++. +++|++||+|+.+ +.||+|++.||++|++ .||+
T Consensus        77 v~p~~~~~~k~~~~~~~GA~V~~~~~~--~~~a~~~a~~~~~~~-~~~~~~~~~~~~~-~~g~~t~~~Ei~~q~~-~~D~  151 (380)
T TIGR01127        77 VMPESAPPSKVKATKSYGAEVILHGDD--YDEAYAFATSLAEEE-GRVFVHPFDDEFV-MAGQGTIGLEIMEDIP-DVDT  151 (380)
T ss_pred             EEcCCCcHHHHHHHHHCCCEEEEECCC--HHHHHHHHHHHHHhc-CCEecCCCCChhh-hhhhHHHHHHHHHhCC-CCCE
Confidence            999999999999999999999999876  889999999998885 7899999999998 6899999999999994 7999


Q ss_pred             EEEccCcchHHHHHHHHHHhcCCCCeEC
Q 028618          179 LVSGIGTGGTITGAGKFLKEKNPNIKVR  206 (206)
Q Consensus       179 vv~~vG~Gg~~aGi~~~~k~~~p~~~vi  206 (206)
                      ||+|+|+||+++|++.++|+.+|++|||
T Consensus       152 vv~~vG~Gg~~aGi~~~~k~~~p~~kvi  179 (380)
T TIGR01127       152 VIVPVGGGGLISGVASAAKQINPNVKVI  179 (380)
T ss_pred             EEEEeChHHHHHHHHHHHHHhCCCCEEE
Confidence            9999999999999999999999999986

A form of threonine dehydratase with two copies of the C-terminal domain Pfam:PF00585 is described by TIGR01124. This model describes a phylogenetically distinct form with a single copy of pfam00585. This form branches with the catabolic threonine dehydratase of E. coli; many members are designated as catabolic for this reason. However, the catabolic form lacks any pfam00585 domain. Many members of this model are found in species with other Ile biosynthetic enzymes.

>cd01562 Thr-dehyd Threonine dehydratase: The first step in amino acid degradation is the removal of nitrogen

Probab=100.00  E-value=1e-47  Score=323.27  Aligned_cols=194  Identities=24%  Similarity=0.323  Sum_probs=180.7

Q ss_pred             cccchhhhhhccccCCcceecccccCCCCceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHH
Q 028618            4 ESSNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGI   83 (206)
Q Consensus         4 ~~~~~~~~i~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~   83 (206)
                      +.+..++.|.+.+++|||+++++|++.+|++||+|+|++||+||||||++.+++.++.+++.    .+++|++|+||||+
T Consensus         3 ~~~~~~~~i~~~ig~TPl~~~~~l~~~~g~~i~~K~E~~nptgS~Kdr~a~~~l~~~~~~~~----~~~iv~~ssGN~g~   78 (304)
T cd01562           3 DILAAAARIKPVVRRTPLLTSPTLSELLGAEVYLKCENLQKTGSFKIRGAYNKLLSLSEEER----AKGVVAASAGNHAQ   78 (304)
T ss_pred             HHHHHHHHHhCcCCCCCcccchhhHHHhCCeEEEEeccCCCcCCcHHHhHHHHHHhcCHhhc----CCcEEEECCCHHHH
Confidence            45678899999999999999999998888999999999999999999999999999887762    15699999999999


Q ss_pred             HHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHh
Q 028618           84 GLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYET  163 (206)
Q Consensus        84 alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t  163 (206)
                      |+|++|+.+|++|++|+|.+.++.|+++++.+||+|+.++.+  ++++.+.+++++++. +++|++|++|+.+ ..||.+
T Consensus        79 alA~~a~~~G~~~~ivvp~~~~~~k~~~l~~~Ga~vi~~~~~--~~~~~~~a~~la~~~-~~~~~~~~~n~~~-~~g~~~  154 (304)
T cd01562          79 GVAYAAKLLGIPATIVMPETAPAAKVDATRAYGAEVVLYGED--FDEAEAKARELAEEE-GLTFIHPFDDPDV-IAGQGT  154 (304)
T ss_pred             HHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEeCCC--HHHHHHHHHHHHHhc-CCEEeCCCCCcch-hccHHH
Confidence            999999999999999999999999999999999999999987  788999999999886 7899999999987 579999


Q ss_pred             HHHHHHhhhCCCCCEEEEccCcchHHHHHHHHHHhcCCCCeEC
Q 028618          164 TGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKVR  206 (206)
Q Consensus       164 ~~~Ei~~q~~~~~d~vv~~vG~Gg~~aGi~~~~k~~~p~~~vi  206 (206)
                      +++||++|++. ||+||+|+|||||++|++.+||+.+|++|||
T Consensus       155 ~~~Ei~~q~~~-~d~vv~~vGtGgt~~Gi~~~lk~~~~~~kvi  196 (304)
T cd01562         155 IGLEILEQVPD-LDAVFVPVGGGGLIAGIATAVKALSPNTKVI  196 (304)
T ss_pred             HHHHHHHhcCC-CCEEEEecCHHHHHHHHHHHHHHhCCCCEEE
Confidence            99999999964 9999999999999999999999999999986

Although the nitrogen atoms of most amino acids are transferred to alpha-ketoglutarate before removal, the alpha-amino group of threonine can be directly converted into NH4+. The direct deamination is catalyzed by threonine dehydratase, in which pyridoxal phosphate (PLP) is the prosthetic group. Threonine dehydratase is widely distributed in all three major phylogenetic divisions.

>PRK09224 threonine dehydratase; Reviewed

Probab=100.00  E-value=2.5e-47  Score=339.53  Aligned_cols=189  Identities=25%  Similarity=0.362  Sum_probs=175.4

Q ss_pred             hhhhccccCCcceecccccCCCCceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHH
Q 028618           10 KDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMA   89 (206)
Q Consensus        10 ~~i~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~alA~~a   89 (206)
                      .++++.+++|||++++++++..|.+||+|+|++||+||||+|+|.+++..+.++..    .++||++|+||||+++|++|
T Consensus        12 ~~v~~~~~~TPL~~~~~Ls~~~g~~i~lK~E~lqptgSfK~RgA~n~i~~l~~~~~----~~gvV~aSaGNha~avA~aa   87 (504)
T PRK09224         12 ARVYDVAQETPLEKAPKLSARLGNQVLLKREDLQPVFSFKLRGAYNKMAQLTEEQL----ARGVITASAGNHAQGVALSA   87 (504)
T ss_pred             HHhcCcCCCCCceehhHhHHHhCCEEEEEecCCCCCCCChHHHHHHHHHhhhHHhc----CCEEEEECcCHHHHHHHHHH
Confidence            46788999999999999999899999999999999999999999999988753322    25799999999999999999


Q ss_pred             HHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHHHHHH
Q 028618           90 AAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELW  169 (206)
Q Consensus        90 ~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~  169 (206)
                      +.+|++|+||||++++..|++.++.+||+|+.++.+  ++++.+.+.+++++. +++|++||+|+.+ ++|++|++.||+
T Consensus        88 ~~lGi~~~IvmP~~tp~~K~~~~r~~GA~Vi~~g~~--~~~a~~~a~~l~~~~-g~~~v~~f~~~~~-i~G~gTi~~EI~  163 (504)
T PRK09224         88 ARLGIKAVIVMPVTTPDIKVDAVRAFGGEVVLHGDS--FDEAYAHAIELAEEE-GLTFIHPFDDPDV-IAGQGTIAMEIL  163 (504)
T ss_pred             HHcCCCEEEEECCCCCHHHHHHHHhCCCEEEEECCC--HHHHHHHHHHHHHhc-CCEEeCCCCCcHH-HHhHHHHHHHHH
Confidence            999999999999999999999999999999999876  889999999999885 8899999999998 689999999999


Q ss_pred             hhhCCCCCEEEEccCcchHHHHHHHHHHhcCCCCeEC
Q 028618          170 KGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKVR  206 (206)
Q Consensus       170 ~q~~~~~d~vv~~vG~Gg~~aGi~~~~k~~~p~~~vi  206 (206)
                      +|++..||+||+|+||||+++|++.++|+.+|++|||
T Consensus       164 ~q~~~~~D~vvvpvGgGGliaGia~~lk~~~p~~kVi  200 (504)
T PRK09224        164 QQHPHPLDAVFVPVGGGGLIAGVAAYIKQLRPEIKVI  200 (504)
T ss_pred             HhccCCCCEEEEecChhHHHHHHHHHHHHhCCCCEEE
Confidence            9996569999999999999999999999999999986

>PRK06815 hypothetical protein; Provisional

Probab=100.00  E-value=1.8e-47  Score=323.73  Aligned_cols=194  Identities=21%  Similarity=0.243  Sum_probs=176.6

Q ss_pred             cccchhhhhhccccCCcceecccccCCCCceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHH
Q 028618            4 ESSNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGI   83 (206)
Q Consensus         4 ~~~~~~~~i~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~   83 (206)
                      +....++++.+.+++|||++++++++..|++||+|+|++|||||||+|++.+++..+.++..    .+++|++|+||||+
T Consensus         6 ~i~~a~~~~~~~i~~TPLv~~~~l~~~~g~~i~~K~E~~nptgS~KdR~a~~~~~~l~~~~~----~~~vv~aSsGN~g~   81 (317)
T PRK06815          6 AILEAHQRLRPQVRVTPLEHSPLLSQHTGCEVYLKCEHLQHTGSFKFRGASNKLRLLNEAQR----QQGVITASSGNHGQ   81 (317)
T ss_pred             HHHHHHHHhhCCCCCCCccccHhHHHhhCCeEEEEecCCCCCCCcHHHHHHHHHHhcchhhc----CceEEEECCChHHH
Confidence            34457788999999999999999998888999999999999999999999999987643322    25699999999999


Q ss_pred             HHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHh
Q 028618           84 GLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYET  163 (206)
Q Consensus        84 alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t  163 (206)
                      |+|++|+.+|++|++|||.++++.|++.++.+||+|+.++.+  ++++...+++++++. +++|++||+|+++ ..||++
T Consensus        82 alA~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~V~~~~~~--~~~~~~~a~~~~~~~-~~~~~~~~~~~~~-~~g~~t  157 (317)
T PRK06815         82 GVALAAKLAGIPVTVYAPEQASAIKLDAIRALGAEVRLYGGD--ALNAELAARRAAEQQ-GKVYISPYNDPQV-IAGQGT  157 (317)
T ss_pred             HHHHHHHHhCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCC--HHHHHHHHHHHHHhc-CCEEecCCCChhh-hcchhH
Confidence            999999999999999999999999999999999999999987  778888899998875 7899999999987 579999


Q ss_pred             HHHHHHhhhCCCCCEEEEccCcchHHHHHHHHHHhcCCCCeEC
Q 028618          164 TGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKVR  206 (206)
Q Consensus       164 ~~~Ei~~q~~~~~d~vv~~vG~Gg~~aGi~~~~k~~~p~~~vi  206 (206)
                      +++||++|++ .||+||+|+|+||+++|++.+|++.+|++|||
T Consensus       158 ~a~Ei~~q~~-~~d~vv~~vG~Gg~~~Gi~~~~k~~~~~~~vi  199 (317)
T PRK06815        158 IGMELVEQQP-DLDAVFVAVGGGGLISGIATYLKTLSPKTEII  199 (317)
T ss_pred             HHHHHHHhcC-CCCEEEEECcHHHHHHHHHHHHHHhCCCCEEE
Confidence            9999999995 69999999999999999999999999999986

>PRK06381 threonine synthase; Validated

Probab=100.00  E-value=5.1e-47  Score=321.28  Aligned_cols=186  Identities=23%  Similarity=0.307  Sum_probs=171.0

Q ss_pred             hccccCCcceecccccCCCC-ceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHHHH
Q 028618           13 TELIGNTPLVYLNNIVNGCV-ARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAA   91 (206)
Q Consensus        13 ~~~~~~TPl~~~~~l~~~~g-~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~alA~~a~~   91 (206)
                      ...+++|||+++++|++.+| .+||+|+|++||+||||+|++.+++.+++++|.     ++||++|+||||+|+|++|+.
T Consensus        10 ~~~~g~TPL~~~~~l~~~~G~~~i~~K~E~~nptGS~K~R~a~~~l~~a~~~g~-----~~lv~aSsGN~g~alA~~aa~   84 (319)
T PRK06381         10 EKPPGGTPLLRARKLEEELGLRKIYLKFEGANPTGTQKDRIAEAHVRRAMRLGY-----SGITVGTCGNYGASIAYFARL   84 (319)
T ss_pred             cccCCCCceeEhHhhHHhcCCceEEEEecCCCCccCcHHHHHHHHHHHHHHcCC-----CEEEEeCCcHHHHHHHHHHHH
Confidence            34689999999999998888 599999999999999999999999999999986     689999999999999999999


Q ss_pred             CCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEcCCCC-CCccHHHHHHhHHHHHHh
Q 028618           92 KQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFE-NPANPKIHYETTGPELWK  170 (206)
Q Consensus        92 ~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~-~~~~~~~g~~t~~~Ei~~  170 (206)
                      +|++|++|||...+..|+++++.+||+|+.++.+  ++++.+.+++++++. ++|++++++ |+.....||.|+++||++
T Consensus        85 ~G~~~~ivvp~~~~~~~~~~l~~~GA~V~~~~~~--~~~~~~~a~~~~~~~-~~~~~~~~~~n~~~~~~G~~t~a~Ei~~  161 (319)
T PRK06381         85 YGLKAVIFIPRSYSNSRVKEMEKYGAEIIYVDGK--YEEAVERSRKFAKEN-GIYDANPGSVNSVVDIEAYSAIAYEIYE  161 (319)
T ss_pred             cCCcEEEEECCCCCHHHHHHHHHcCCEEEEcCCC--HHHHHHHHHHHHHHc-CcEecCCCCCCcchHhhhHHHHHHHHHH
Confidence            9999999999999999999999999999999986  778889999998875 788898886 763226799999999999


Q ss_pred             hhCCCCCEEEEccCcchHHHHHHHHHHhc------CCCCeEC
Q 028618          171 GSGGRIDALVSGIGTGGTITGAGKFLKEK------NPNIKVR  206 (206)
Q Consensus       171 q~~~~~d~vv~~vG~Gg~~aGi~~~~k~~------~p~~~vi  206 (206)
                      |++..||+||+|+|+||+++|++.+|++.      +|+++||
T Consensus       162 ql~~~~D~vv~~vGtGgt~~Gl~~~~~~~~~~g~~~~~~~vi  203 (319)
T PRK06381        162 ALGDVPDAVAVPVGNGTTLAGIYHGFRRLYDRGKTSRMPRMI  203 (319)
T ss_pred             HhCCCCCEEEEcCCccHHHHHHHHHHHHHHhCCCcCCCCEEE
Confidence            99767999999999999999999999998      7888875

>PRK07334 threonine dehydratase; Provisional

Probab=100.00  E-value=1.5e-47  Score=333.49  Aligned_cols=192  Identities=23%  Similarity=0.286  Sum_probs=176.8

Q ss_pred             cchhhhhhccccCCcceecccccCCCCceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHH
Q 028618            6 SNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGL   85 (206)
Q Consensus         6 ~~~~~~i~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~al   85 (206)
                      ...++++.+.+++|||++++++++.+|.+||+|+|+.|||||||||++.+++..+.++..    .+++|++|+||||+|+
T Consensus        11 ~~a~~~i~~~i~~TPl~~~~~l~~~~g~~l~~K~E~~nptGS~KdR~a~~~i~~~~~~~~----~~~vv~aSsGN~g~al   86 (403)
T PRK07334         11 RAAAARLAGQVLRTPCVHSRTLSQITGAEVWLKFENLQFTASFKERGALNKLLLLTEEER----ARGVIAMSAGNHAQGV   86 (403)
T ss_pred             HHHHHHHhCCCCCCCccchHHHHHhhCCeEEEEeccCCCCCCchHHHHHHHHHhcCHHHh----CCcEEEECCcHHHHHH
Confidence            346778999999999999999998888999999999999999999999999998754432    1469999999999999


Q ss_pred             HHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHH
Q 028618           86 AFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTG  165 (206)
Q Consensus        86 A~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~  165 (206)
                      |++|+.+|++|++|||..+++.|+++++.+||+|+.++.+  ++++.+.+++++++. +++|++||+|+.+ ..||+|++
T Consensus        87 A~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~v~~~~~~--~~~~~~~a~~l~~~~-~~~~~~~~~~~~~-~~g~~t~~  162 (403)
T PRK07334         87 AYHAQRLGIPATIVMPRFTPTVKVERTRGFGAEVVLHGET--LDEARAHARELAEEE-GLTFVHPYDDPAV-IAGQGTVA  162 (403)
T ss_pred             HHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECcC--HHHHHHHHHHHHHhc-CCEecCCCCCHHH-HHhHHHHH
Confidence            9999999999999999999999999999999999999865  788999999998885 8899999999998 68999999


Q ss_pred             HHHHhhhCCCCCEEEEccCcchHHHHHHHHHHhcCCCCeEC
Q 028618          166 PELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKVR  206 (206)
Q Consensus       166 ~Ei~~q~~~~~d~vv~~vG~Gg~~aGi~~~~k~~~p~~~vi  206 (206)
                      +||++|+ +.+|+||+|+|+||+++|++.+||+.+|++|||
T Consensus       163 ~Ei~~q~-~~~d~vv~~vG~GG~~~Gi~~~lk~~~~~~~vi  202 (403)
T PRK07334        163 LEMLEDA-PDLDTLVVPIGGGGLISGMATAAKALKPDIEII  202 (403)
T ss_pred             HHHHhcC-CCCCEEEEecCHHHHHHHHHHHHHHhCCCCEEE
Confidence            9999999 479999999999999999999999999999986

>PRK02991 D-serine dehydratase; Provisional

Probab=100.00  E-value=6.2e-47  Score=330.87  Aligned_cols=188  Identities=22%  Similarity=0.272  Sum_probs=170.0

Q ss_pred             ccCCcceecccccCCCC--------ceEEEEeCCCCC-CCChhhHHHHHHHHH-----HHHcCCCCCCC-----------
Q 028618           16 IGNTPLVYLNNIVNGCV--------ARIAAKLEMMEP-CSSVKDRIGYSMISD-----AEAKGLITPGE-----------   70 (206)
Q Consensus        16 ~~~TPl~~~~~l~~~~g--------~~i~~K~E~~~p-tGS~K~R~a~~~~~~-----a~~~g~~~~~~-----------   70 (206)
                      +++|||++++.+++.+|        .+||+|+|++|| |||||+|++.+++..     +++.|.+.++.           
T Consensus        73 ~~~TPL~~~~~l~~~~g~~~~~~~~~~V~lK~E~~np~tGSFK~RGA~~~i~~l~~~~a~~~G~~~~~~~~~~l~~~~~~  152 (441)
T PRK02991         73 IIESPLVAIPAMQKALEKEYGQPISGRLLLKKDSHLPISGSIKARGGIYEVLKHAEKLALEAGLLTLDDDYSKLASPEFR  152 (441)
T ss_pred             ccCCCceehHHHHHHhcccccCCcCceEEEEEcCCCCCcCChHHHHHHHHHHHhhHHHHHHhCCCCcCcchhhhcchhhh
Confidence            89999999999887665        699999999999 999999999999875     45777766553           


Q ss_pred             -----eEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCe
Q 028618           71 -----SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNA  145 (206)
Q Consensus        71 -----~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~  145 (206)
                           .+||++|+||||+|+|++|+.+|++|+||||+++++.|++.++.+||+|+.++.+  ++++.+.+++++++.+++
T Consensus       153 ~~~~~~~VV~aSsGN~G~alA~aA~~~G~~~tIvvP~~a~~~K~~~ir~~GAeVi~~~~~--~~~a~~~A~~la~~~~~~  230 (441)
T PRK02991        153 QFFSQYSIAVGSTGNLGLSIGIMSAALGFKVTVHMSADARQWKKDKLRSHGVTVVEYEGD--YGVAVEEGRKAAESDPNC  230 (441)
T ss_pred             hhccCcEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHhCCCEEEEECCC--HHHHHHHHHHHHHhcCCe
Confidence                 4799999999999999999999999999999999999999999999999999987  789999999999887678


Q ss_pred             EEcCCCCCCccHHHHHHhHHHHHHhhhCC--------CCCEEEEccCcchHHHHHHHHHHhc-CCCCeEC
Q 028618          146 YMLQQFENPANPKIHYETTGPELWKGSGG--------RIDALVSGIGTGGTITGAGKFLKEK-NPNIKVR  206 (206)
Q Consensus       146 ~~~~~~~~~~~~~~g~~t~~~Ei~~q~~~--------~~d~vv~~vG~Gg~~aGi~~~~k~~-~p~~~vi  206 (206)
                      +|++++++++. ++||+|++.||++|+++        .||+||+|+|+||+++|++.+||+. +|++|||
T Consensus       231 ~~~~~~~~~~~-iaG~~Tig~EI~eQl~~~~~~vD~~~Pd~VvvpvGgGGliaGia~~lk~~~~~~~kVi  299 (441)
T PRK02991        231 YFIDDENSRTL-FLGYAVAGLRLKAQLAEQGIVVDADHPLFVYLPCGVGGGPGGVAFGLKLAFGDHVHCF  299 (441)
T ss_pred             EeCCCCCchhH-HHhHHHHHHHHHHHhhhccCccccCCCCEEEEEeCccHHHHHHHHHHHHhcCCCCEEE
Confidence            99999888776 78999999999999952        3679999999999999999999997 6889886

>cd06448 L-Ser-dehyd Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- , D-serine, or L-threonine to pyruvate/ketobutyrate and ammonia

Probab=100.00  E-value=4.4e-47  Score=321.00  Aligned_cols=185  Identities=22%  Similarity=0.276  Sum_probs=169.2

Q ss_pred             CCcceecccccCCCCceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCCcEE
Q 028618           18 NTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLI   97 (206)
Q Consensus        18 ~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~   97 (206)
                      +|||++++++++..|++||+|+|++||+||||+|++.+++.++.++|. .+ .++||++|+||||.|+|++|+.+|++|+
T Consensus         1 ~TPl~~~~~l~~~~g~~i~~K~E~~nptGS~K~R~a~~~l~~a~~~g~-~~-~~~vv~aSsGN~g~alA~~a~~~G~~~~   78 (316)
T cd06448           1 KTPLIESTALSKTAGCNVFLKLENLQPSGSFKIRGIGHLCQKSAKQGL-NE-CVHVVCSSGGNAGLAAAYAARKLGVPCT   78 (316)
T ss_pred             CCCccccchhhHhhCCeEEEEeccCCCcCChHHHHHHHHHHHHHHhhc-cc-CCeEEEeCCcHHHHHHHHHHHHcCCCEE
Confidence            699999999998888999999999999999999999999999999885 22 2689999999999999999999999999


Q ss_pred             EEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHHHHHHhhhCC--C
Q 028618           98 ITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGG--R  175 (206)
Q Consensus        98 ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~q~~~--~  175 (206)
                      +|||+++++.|++.|+.+||+|+.++.+. ++++.+.+++++++.++++|++||+||.+ ..||.|+++||++|+++  .
T Consensus        79 iv~p~~~~~~k~~~l~~~GA~v~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~n~~~-~~g~~t~~~Ei~~q~~~~~~  156 (316)
T cd06448          79 IVVPESTKPRVVEKLRDEGATVVVHGKVW-WEADNYLREELAENDPGPVYVHPFDDPLI-WEGHSSMVDEIAQQLQSQEK  156 (316)
T ss_pred             EEECCCCCHHHHHHHHHcCCEEEEECCch-HHHHHHHHHHHHhccCCcEEeCCCCCchh-hccccHHHHHHHHHccccCC
Confidence            99999999999999999999999998763 55677778888777658999999999998 67999999999999976  5


Q ss_pred             CCEEEEccCcchHHHHHHHHHHhcC-CCCeEC
Q 028618          176 IDALVSGIGTGGTITGAGKFLKEKN-PNIKVR  206 (206)
Q Consensus       176 ~d~vv~~vG~Gg~~aGi~~~~k~~~-p~~~vi  206 (206)
                      ||+||+|+|+||+++|++.+|++.+ |+++||
T Consensus       157 ~D~vv~~vG~Gg~~~Gv~~~~k~~~~~~~~ii  188 (316)
T cd06448         157 VDAIVCSVGGGGLLNGIVQGLERNGWGDIPVV  188 (316)
T ss_pred             CCEEEEEeCchHHHHHHHHHHHhcCCCCCEEE
Confidence            9999999999999999999999996 999986

>PRK08813 threonine dehydratase; Provisional

Probab=100.00  E-value=1.1e-46  Score=320.62  Aligned_cols=183  Identities=22%  Similarity=0.267  Sum_probs=168.3

Q ss_pred             ccchhhhhhccccCCcceecccccCCCCceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHH
Q 028618            5 SSNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIG   84 (206)
Q Consensus         5 ~~~~~~~i~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~a   84 (206)
                      ....+++|..++.+|||++++.+      +||+|+|++|||||||+|++.+++..+.+++..    +.||++|+||||.|
T Consensus        26 i~~A~~~i~~~i~~TPL~~~~~l------~v~lK~E~~nptGSfK~RgA~~~l~~a~~~~~~----~~VV~aSsGN~G~a   95 (349)
T PRK08813         26 VLAAQARLRRYLSPTPLHYAERF------GVWLKLENLQRTGSYKVRGALNALLAGLERGDE----RPVICASAGNHAQG   95 (349)
T ss_pred             HHHHHHHHhCcCCCCCeEECCCC------cEEEEecCCCCcCCCHHHHHHHHHHHHHHcCCC----CeEEEECCCHHHHH
Confidence            34567889999999999998765      499999999999999999999999999998863    46999999999999


Q ss_pred             HHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhH
Q 028618           85 LAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETT  164 (206)
Q Consensus        85 lA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~  164 (206)
                      +|++|+.+|++|+||||+++++.|++.++.+||+|+.++.+  ++++.+.+++++++. +++|++||+|+.+ ++||+|+
T Consensus        96 lA~aa~~~Gi~~~IvvP~~~~~~K~~~i~~~GAeVv~~g~~--~~~a~~~a~~la~~~-g~~~v~~~~np~~-i~G~~Ti  171 (349)
T PRK08813         96 VAWSAYRLGVQAITVMPHGAPQTKIAGVAHWGATVRQHGNS--YDEAYAFARELADQN-GYRFLSAFDDPDV-IAGQGTV  171 (349)
T ss_pred             HHHHHHHcCCCEEEEEcCCCCHHHHHHHHHcCCEEEEECCC--HHHHHHHHHHHHHhc-CCEEcCccCChHH-HHHHHHH
Confidence            99999999999999999999999999999999999999876  889999999999886 8999999999998 6899999


Q ss_pred             HHHHHhhhCCCCCEEEEccCcchHHHHHHHHHHhcCCCCeEC
Q 028618          165 GPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKVR  206 (206)
Q Consensus       165 ~~Ei~~q~~~~~d~vv~~vG~Gg~~aGi~~~~k~~~p~~~vi  206 (206)
                      ++||++|.   ||+||+|+|+||+++|++.+||+  +++|||
T Consensus       172 g~EI~e~~---pD~VvvpvGgGGliaGia~~lk~--~~~rVi  208 (349)
T PRK08813        172 GIELAAHA---PDVVIVPIGGGGLASGVALALKS--QGVRVV  208 (349)
T ss_pred             HHHHHcCC---CCEEEEEeCccHHHHHHHHHHhc--CCCEEE
Confidence            99999874   79999999999999999999996  567775

>TIGR02035 D_Ser_am_lyase D-serine ammonia-lyase

Probab=100.00  E-value=2e-46  Score=326.64  Aligned_cols=189  Identities=23%  Similarity=0.271  Sum_probs=171.1

Q ss_pred             cccCCcceecccccCCC--------CceEEEEeCCCCC-CCChhhHHHHHHHHH-----HHHcCCCCCCC----------
Q 028618           15 LIGNTPLVYLNNIVNGC--------VARIAAKLEMMEP-CSSVKDRIGYSMISD-----AEAKGLITPGE----------   70 (206)
Q Consensus        15 ~~~~TPl~~~~~l~~~~--------g~~i~~K~E~~~p-tGS~K~R~a~~~~~~-----a~~~g~~~~~~----------   70 (206)
                      .+++|||++++++++.+        +.+||+|+|+.|| |||||+|++.+++..     +.+.|.+.+++          
T Consensus        67 ~~~~TPL~~~~~ls~~~~~~~~~~~~~~v~lKlE~~nP~tGSfKdRGA~~~i~~~~~~~A~~~G~l~~~~~~~~l~e~~~  146 (431)
T TIGR02035        67 GIIESPLVEIFNMQKELEKKYQQEIPGRLLLKMDSHLPISGSIKARGGIYEVLKHAEELALEAGLLKLDDDYSILAEKKF  146 (431)
T ss_pred             CccCCCccchHHHHHHhhhcccCCcCceEEEEecccCCccCCcHHHHHHHHHHHhhHHHHHHcCCCCcCcchhhhcchhh
Confidence            88999999999998743        5799999999999 999999999999875     67888877663          


Q ss_pred             ------eEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCC
Q 028618           71 ------SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPN  144 (206)
Q Consensus        71 ------~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~  144 (206)
                            .+||++|+||||+|+|++|+.+|++|+||||++++++|++.++.+||+|+.++.+  ++++.+.+++++++.++
T Consensus       147 ~~~~~~~~Vv~aSsGN~G~slA~~Aa~lG~~~~IvmP~~a~~~K~~~ir~~GAeVv~~~~~--~~~a~~~A~~la~~~~~  224 (431)
T TIGR02035       147 KDFFSRYSIAVGSTGNLGLSIGIISAALGFQVTVHMSADAKQWKKDKLRSKGVTVVEYESD--YGVAVEEGRKNADADPM  224 (431)
T ss_pred             hhcccCceEEEECccHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECCC--HHHHHHHHHHHHHhcCC
Confidence                  4899999999999999999999999999999999999999999999999999987  88999999999998777


Q ss_pred             eEEcCCCCCCccHHHHHHhHHHHHHhhhCC--------CCCEEEEccCcchHHHHHHHHHHhc-CCCCeEC
Q 028618          145 AYMLQQFENPANPKIHYETTGPELWKGSGG--------RIDALVSGIGTGGTITGAGKFLKEK-NPNIKVR  206 (206)
Q Consensus       145 ~~~~~~~~~~~~~~~g~~t~~~Ei~~q~~~--------~~d~vv~~vG~Gg~~aGi~~~~k~~-~p~~~vi  206 (206)
                      +||+++ .|+.++++||+|++.||++|+++        .||+|++|+|+||+++|++.+||+. +|++|||
T Consensus       225 ~~~~d~-~n~~n~~aG~~T~g~EI~eQl~~~~~~~d~~~pd~V~vp~G~GGli~Gia~~lK~~~~~~vkvi  294 (431)
T TIGR02035       225 CYFVDD-ENSRNLFLGYAVAASRLKKQFDKKGIVVDKEHPLFVYLPCGVGGGPGGVAFGLKLAFGDNVHCF  294 (431)
T ss_pred             eEECCC-CCcccHHhhHHHHHHHHHHhhhccccccccCCCCEEEEEeCcCHHHHHHHHHHHHhcCCCCEEE
Confidence            888887 45555689999999999999952        4789999999999999999999997 8999986

This family consists of D-serine ammonia-lyase (EC 4.3.1.18), a pyridoxal-phosphate enzyme that converts D-serine to pyruvate and NH3. This enzyme is also called D-serine dehydratase and D-serine deaminase and was previously designated EC 4.2.1.14. It is homologous to an enzyme that acts on threonine and may itself act weakly on threonine.

>PRK08246 threonine dehydratase; Provisional

Probab=100.00  E-value=2.4e-46  Score=315.84  Aligned_cols=187  Identities=24%  Similarity=0.356  Sum_probs=169.5

Q ss_pred             ccchhhhhhccccCCcceecccccCCCCceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHH
Q 028618            5 SSNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIG   84 (206)
Q Consensus         5 ~~~~~~~i~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~a   84 (206)
                      ....+++|.+.+++|||++++.++.. +.+||+|+|++|||||||+|++.+++..+.+ +     .++||++|+||||+|
T Consensus        10 i~~a~~~i~~~i~~TPl~~~~~l~~~-~~~i~~K~E~~nptGS~K~R~a~~~~~~~~~-~-----~~~vv~aSsGN~g~a   82 (310)
T PRK08246         10 VRAAAQRIAPHIRRTPVLEADGAGFG-PAPVWLKLEHLQHTGSFKARGAFNRLLAAPV-P-----AAGVVAASGGNAGLA   82 (310)
T ss_pred             HHHHHHHHhCcCCCCCeeeccccccC-CCEEEEEECCCCCCCCCHHHHHHHHHHhhcc-c-----CCeEEEeCCCHHHHH
Confidence            34567889999999999999998876 7899999999999999999999999988765 2     257999999999999


Q ss_pred             HHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhH
Q 028618           85 LAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETT  164 (206)
Q Consensus        85 lA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~  164 (206)
                      +|++|+.+|++|++|||+..++.|+++++.+||+|+.++.+  ++++.+.+.+++++. +++|++||+|+.+ +.||+|+
T Consensus        83 ~A~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~--~~~~~~~a~~~~~~~-g~~~~~~~~n~~~-i~g~~t~  158 (310)
T PRK08246         83 VAYAAAALGVPATVFVPETAPPAKVARLRALGAEVVVVGAE--YADALEAAQAFAAET-GALLCHAYDQPEV-LAGAGTL  158 (310)
T ss_pred             HHHHHHHcCCCEEEEECCCCcHHHHHHHHHCCCEEEEeCCC--HHHHHHHHHHHHHhc-CCEeCCCCCChhh-hcchHHH
Confidence            99999999999999999999999999999999999999976  778889999988876 8999999999998 6799999


Q ss_pred             HHHHHhhhCCCCCEEEEccCcchHHHHHHHHHHhcCCCCeEC
Q 028618          165 GPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKVR  206 (206)
Q Consensus       165 ~~Ei~~q~~~~~d~vv~~vG~Gg~~aGi~~~~k~~~p~~~vi  206 (206)
                      ++||++|+ +.||+||+|+|+||+++|++.+|+.   ++|||
T Consensus       159 ~~Ei~eq~-~~~D~iv~~vG~GG~~~Gi~~~~~~---~~~vi  196 (310)
T PRK08246        159 GLEIEEQA-PGVDTVLVAVGGGGLIAGIAAWFEG---RARVV  196 (310)
T ss_pred             HHHHHHhc-CCCCEEEEecCccHHHHHHHHHhcC---CCEEE
Confidence            99999999 5799999999999999999999975   35654

>PRK06352 threonine synthase; Validated

Probab=100.00  E-value=1.9e-46  Score=321.22  Aligned_cols=186  Identities=23%  Similarity=0.295  Sum_probs=170.0

Q ss_pred             hhhccccCCcceecccccCCCCceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHHH
Q 028618           11 DVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAA   90 (206)
Q Consensus        11 ~i~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~alA~~a~   90 (206)
                      +++..+++|||++++++++..|++||+|+|++|||||||||++.+++.++.++|.     ++||++|+||||+|+|++|+
T Consensus        21 ~~~l~~G~TPL~~~~~l~~~~g~~l~~K~E~~nptGS~KdR~a~~~i~~a~~~g~-----~~vV~aSsGN~G~AlA~~aa   95 (351)
T PRK06352         21 MISLAEGNTPLIPLPNLSKELGVTLYGKYEGLNPTGSFKDRGMVMAVAKAKEEGA-----EAVICASTGNTSAAAAAYAT   95 (351)
T ss_pred             ccccCCCCCCeeEcHhhHHHhCCeEEEEecCCCCccChHHHHHHHHHHHHHHCCC-----CEEEEECCcHHHHHHHHHHH
Confidence            3667899999999999988888999999999999999999999999999999885     58999999999999999999


Q ss_pred             HCCCcEEEEeCCC-CCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHHHHHH
Q 028618           91 AKQYRLIITMPAS-MSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELW  169 (206)
Q Consensus        91 ~~g~~~~ivvp~~-~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~  169 (206)
                      .+|++|+||||++ .++.|+++++.+||+|+.++.+  ++++.+.+++++++. ++++++ +.|+.+ ..||.|+++||+
T Consensus        96 ~~G~~~~ivvp~~~~~~~k~~~~~a~GA~V~~~~~~--~~~~~~~a~~~~~~~-~~~~~~-~~n~~~-~~G~~t~~~EI~  170 (351)
T PRK06352         96 RAGLKAYIVIPEGKVALGKLAQAVMYGADIISIQGN--FDEALKSVRELAETE-AVTLVN-SVNPYR-LEGQKTAAFEIC  170 (351)
T ss_pred             HcCCcEEEEEeCCCCcHHHHHHHHhcCCEEEEECCC--HHHHHHHHHHHHHhc-Cccccc-CCCccc-eeeHHHHHHHHH
Confidence            9999999999998 5899999999999999999987  778889999998874 666665 568888 579999999999


Q ss_pred             hhhCCCCCEEEEccCcchHHHHHHHHHHhcCCC-----CeEC
Q 028618          170 KGSGGRIDALVSGIGTGGTITGAGKFLKEKNPN-----IKVR  206 (206)
Q Consensus       170 ~q~~~~~d~vv~~vG~Gg~~aGi~~~~k~~~p~-----~~vi  206 (206)
                      +|++..||+||+|+|+||+++|++++||+++|+     +|||
T Consensus       171 ~Q~~~~~D~vvv~vG~GG~~~Gi~~~lk~~~~~~~~~~~~vi  212 (351)
T PRK06352        171 EQLGSAPDVLAIPVGNAGNISAYWKGFKEWNEAKASGLPRMH  212 (351)
T ss_pred             HHcCCCCCEEEEECCchHHHHHHHHHHHHHHhcCCCCCCEEE
Confidence            999767999999999999999999999999887     5765

>PRK08197 threonine synthase; Validated

Probab=100.00  E-value=4.8e-46  Score=323.29  Aligned_cols=186  Identities=28%  Similarity=0.261  Sum_probs=172.3

Q ss_pred             hhccccCCcceecccccCCCC-ceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHHH
Q 028618           12 VTELIGNTPLVYLNNIVNGCV-ARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAA   90 (206)
Q Consensus        12 i~~~~~~TPl~~~~~l~~~~g-~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~alA~~a~   90 (206)
                      ++...++|||++++++++.+| .+||+|+|++|||||||||++.+++..|.++|.     ++||++|+||||.|+|++|+
T Consensus        73 vslgeG~TPL~~~~~l~~~~G~~~l~~K~E~~nPtGSfKdRga~~~i~~a~~~g~-----~~vv~aSsGN~g~alA~~aa  147 (394)
T PRK08197         73 VSLGEGMTPLLPLPRLGKALGIGRLWVKDEGLNPTGSFKARGLAVGVSRAKELGV-----KHLAMPTNGNAGAAWAAYAA  147 (394)
T ss_pred             CccCcCCCCceEhHHHHHHhCCCcEEEEeCCCCCCcCcHHhHHHHHHHHHHHcCC-----CEEEEeCCcHHHHHHHHHHH
Confidence            677889999999999998888 499999999999999999999999999999886     68999999999999999999


Q ss_pred             HCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHHHHHHh
Q 028618           91 AKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWK  170 (206)
Q Consensus        91 ~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~  170 (206)
                      .+|++|+||+|+++++.|+++++.+||+|+.++.+  ++++.+.+++.+++. +++++++++||.+ ++|++|+++||++
T Consensus       148 ~~G~~~~v~vp~~~~~~k~~~~~~~GA~Vi~v~~~--~~~~~~~a~~~~~~~-g~~~~~~~~np~~-ieG~~t~a~Ei~e  223 (394)
T PRK08197        148 RAGIRATIFMPADAPEITRLECALAGAELYLVDGL--ISDAGKIVAEAVAEY-GWFDVSTLKEPYR-IEGKKTMGLELAE  223 (394)
T ss_pred             HcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCC--HHHHHHHHHHHHHhc-CcccccCCCCccc-hhcHHHHHHHHHH
Confidence            99999999999999999999999999999999987  778888898888876 7999999999998 6899999999999


Q ss_pred             hhCCC-CCEEEEccCcchHHHHHHHHHHhc-------CCCCeEC
Q 028618          171 GSGGR-IDALVSGIGTGGTITGAGKFLKEK-------NPNIKVR  206 (206)
Q Consensus       171 q~~~~-~d~vv~~vG~Gg~~aGi~~~~k~~-------~p~~~vi  206 (206)
                      |++++ ||+||+|+|+||+++|++.+|+++       .|..|||
T Consensus       224 Ql~~~~pD~vvvpvG~Gg~~~Gi~~~~k~~~~~g~~~~~~p~ii  267 (394)
T PRK08197        224 QLGWRLPDVILYPTGGGVGLIGIWKAFDELEALGWIGGKRPRLV  267 (394)
T ss_pred             HcCCCCCCEEEEeCCChHHHHHHHHHHHHHHHcCCcCCCCCeEE
Confidence            99754 999999999999999999999997       3777764

>cd01563 Thr-synth_1 Threonine synthase is a pyridoxal phosphate (PLP) dependent enzyme that catalyses the last reaction in the synthesis of threonine from aspartate

Probab=100.00  E-value=5.7e-46  Score=315.44  Aligned_cols=187  Identities=26%  Similarity=0.246  Sum_probs=172.5

Q ss_pred             hhhhccccCCcceecccccCCCC-ceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHH
Q 028618           10 KDVTELIGNTPLVYLNNIVNGCV-ARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFM   88 (206)
Q Consensus        10 ~~i~~~~~~TPl~~~~~l~~~~g-~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~alA~~   88 (206)
                      +++...+++|||++++++++..| .+||+|+|++||+||||+|++.+++.++.++|.     ++||++|+||||+|+|++
T Consensus        14 ~~~~l~~g~TPl~~~~~l~~~~g~~~i~~K~E~~nptGS~K~R~a~~~l~~a~~~g~-----~~vv~~SsGN~g~alA~~   88 (324)
T cd01563          14 DIVSLGEGNTPLVRAPRLGERLGGKNLYVKDEGLNPTGSFKDRGMTVAVSKAKELGV-----KAVACASTGNTSASLAAY   88 (324)
T ss_pred             CcccCCCCCCceeechhhHhhcCCCceEEEecCCCCcccHHHhhHHHHHHHHHHcCC-----CEEEEeCCCHHHHHHHHH
Confidence            45888999999999999988776 799999999999999999999999999999884     689999999999999999


Q ss_pred             HHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHHHHH
Q 028618           89 AAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPEL  168 (206)
Q Consensus        89 a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei  168 (206)
                      |+.+|++|++|||+++++.|+++++.+||+|+.++.+  ++++.+.+++++++.  ++|++|++|+.+ ..||.+++.||
T Consensus        89 a~~~G~~~~ivvp~~~~~~k~~~l~~~GA~Vi~~~~~--~~~~~~~a~~~~~~~--~~~~~~~~n~~~-~~g~~t~~~Ei  163 (324)
T cd01563          89 AARAGIKCVVFLPAGKALGKLAQALAYGATVLAVEGN--FDDALRLVRELAEEN--WIYLSNSLNPYR-LEGQKTIAFEI  163 (324)
T ss_pred             HHHcCCceEEEEeCCCCHHHHHHHHHcCCEEEEECCc--HHHHHHHHHHHHHhc--CeeccCCCCcce-ecchhhhHHHH
Confidence            9999999999999999999999999999999999986  778889999998885  789999999999 57999999999


Q ss_pred             HhhhCC-CCCEEEEccCcchHHHHHHHHHHhcC------CCCeEC
Q 028618          169 WKGSGG-RIDALVSGIGTGGTITGAGKFLKEKN------PNIKVR  206 (206)
Q Consensus       169 ~~q~~~-~~d~vv~~vG~Gg~~aGi~~~~k~~~------p~~~vi  206 (206)
                      ++|+++ .||+||+|+||||+++|++.+||+.+      |+++||
T Consensus       164 ~~q~~~~~~d~vv~~vGtGg~~~G~~~~~k~~~~~g~~~~~~~vi  208 (324)
T cd01563         164 AEQLGWEVPDYVVVPVGNGGNITAIWKGFKELKELGLIDRLPRMV  208 (324)
T ss_pred             HHHcCCCCCCEEEEecCCcHHHHHHHHHHHHHHhCCccccCCeEE
Confidence            999964 69999999999999999999999875      567775

It proceeds by converting O-phospho-L-homoserine (OPH) into threonine and inorganic phosphate. In plants, OPH is an intermediate between the methionine and threonine/isoleucine pathways. Thus threonine synthase competes for OPH with cystathionine-gamma-synthase, the first enzyme in the methionine pathway. These enzymes are in general dimers. Members of this CD, Thr-synth_1, are widely distributed in bacteria, archaea and higher plants.

>PRK07591 threonine synthase; Validated

Probab=100.00  E-value=9e-46  Score=323.61  Aligned_cols=187  Identities=21%  Similarity=0.217  Sum_probs=173.9

Q ss_pred             hhccccCCcceecccccCCCC-ceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHHH
Q 028618           12 VTELIGNTPLVYLNNIVNGCV-ARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAA   90 (206)
Q Consensus        12 i~~~~~~TPl~~~~~l~~~~g-~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~alA~~a~   90 (206)
                      ++...|+|||++++++++.+| .+||+|+|++|||||||||++.+++..|.+.|.     ++|+++|+||||+|+|++|+
T Consensus        83 v~l~eG~TPLv~~~~l~~~lG~~~l~~K~E~~nPtGSfKdRga~~~v~~A~~~g~-----~~vv~aSsGN~g~alA~~aa  157 (421)
T PRK07591         83 VDLGPGFTPLVKADRLARELGLKNLYIKDDSVNPTHSFKDRVVSVALTAARELGF-----TTVACASTGNLANSVAAHAA  157 (421)
T ss_pred             CcCCCCCCcceEhHHHHHHhCCCcEEEEeCCCCCccChHHHHHHHHHHHHHHcCC-----CEEEEeCCCHHHHHHHHHHH
Confidence            677889999999999998888 499999999999999999999999999999986     57899999999999999999


Q ss_pred             HCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHHHHHHh
Q 028618           91 AKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWK  170 (206)
Q Consensus        91 ~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~  170 (206)
                      ++|++|+||||+++++.|+.+++.+||+|+.++++  ++++.+.+++++++.++++|++++.||.. ++|++|+++||++
T Consensus       158 ~~Gl~~~I~vP~~~~~~k~~~~~~~GA~Vi~v~g~--~d~a~~~a~~~~~~~~~~~~~n~~~~p~~-ieG~~Tia~Ei~e  234 (421)
T PRK07591        158 RAGLDSCVFIPADLEAGKIVGTLVYGPTLVAVDGN--YDDVNRLCSELANEHEGWGFVNINLRPYY-AEGSKTLGYEVAE  234 (421)
T ss_pred             HcCCCEEEEEcCCCCHHHHHHHHHcCCEEEEECCC--HHHHHHHHHHHHHhcCCEEEecCCCCccc-ccchHHHHHHHHH
Confidence            99999999999999999999999999999999987  78899999999888768899999888887 6899999999999


Q ss_pred             hhCCC-CCEEEEccCcchHHHHHHHHHHhc-------CCCCeEC
Q 028618          171 GSGGR-IDALVSGIGTGGTITGAGKFLKEK-------NPNIKVR  206 (206)
Q Consensus       171 q~~~~-~d~vv~~vG~Gg~~aGi~~~~k~~-------~p~~~vi  206 (206)
                      |++++ ||+||+|+|+||+++|++.+|+++       .|.+|||
T Consensus       235 Ql~~~~pD~iv~pvG~Gg~~~Gv~~g~kel~~~g~i~~~~prii  278 (421)
T PRK07591        235 QLGWRLPDQVVAPLASGSLLTKIDKGFQELIKVGLVEDKPVRVF  278 (421)
T ss_pred             HcCCCCCCEEEEeCCchHHHHHHHHHHHHHHhcCCccCCCceEE
Confidence            99755 999999999999999999999997       5777775

>cd00640 Trp-synth-beta_II Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP)-dependent enzymes catalyzes beta-replacement and beta-elimination reactions

Probab=100.00  E-value=4.7e-45  Score=298.33  Aligned_cols=183  Identities=42%  Similarity=0.582  Sum_probs=171.7

Q ss_pred             CcceecccccCCCCceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEE
Q 028618           19 TPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLII   98 (206)
Q Consensus        19 TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~i   98 (206)
                      |||++++++++..+.+||+|+|+.||+||||+|++.+++..+.++|.+ ++ ..||++|+||||.|+|++|+.+|++|++
T Consensus         1 TPl~~~~~l~~~~~~~l~~K~e~~~ptgS~K~R~a~~~l~~a~~~g~~-~~-~~vv~~ssGN~g~alA~~a~~~g~~~~v   78 (244)
T cd00640           1 TPLVRLKRLSKLGGANIYLKLEFLNPTGSFKDRGALNLILLAEEEGKL-PK-GVIIESTGGNTGIALAAAAARLGLKCTI   78 (244)
T ss_pred             CCeeEccccccccCCEEEEEecccCCcCCcHHHHHHHHHHHHHHcCCC-CC-CEEEEeCCcHHHHHHHHHHHHcCCCEEE
Confidence            899999999987788999999999999999999999999999998865 33 6899999999999999999999999999


Q ss_pred             EeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHHHHHHhhhCC-CCC
Q 028618           99 TMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGG-RID  177 (206)
Q Consensus        99 vvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~q~~~-~~d  177 (206)
                      |+|...++.++++++.+|++|+.++.+  ++++.+.+++++++.++++|+++|+|+.+ ..||.++++||.+|++. .||
T Consensus        79 ~~p~~~~~~~~~~~~~~Ga~v~~~~~~--~~~~~~~a~~~~~~~~~~~~~~~~~n~~~-~~g~~~~~~Ei~~q~~~~~~d  155 (244)
T cd00640          79 VMPEGASPEKVAQMRALGAEVVLVPGD--FDDAIALAKELAEEDPGAYYVNQFDNPAN-IAGQGTIGLEILEQLGGQKPD  155 (244)
T ss_pred             EECCCCCHHHHHHHHHCCCEEEEECCC--HHHHHHHHHHHHHhCCCCEecCCCCCHHH-HHHHHHHHHHHHHHcCCCCCC
Confidence            999999999999999999999999988  77899999999998668999999999998 57889999999999976 699


Q ss_pred             EEEEccCcchHHHHHHHHHHhcCCCCeEC
Q 028618          178 ALVSGIGTGGTITGAGKFLKEKNPNIKVR  206 (206)
Q Consensus       178 ~vv~~vG~Gg~~aGi~~~~k~~~p~~~vi  206 (206)
                      +||+|+|+||+++|++.+|++.+|++|||
T Consensus       156 ~ivvp~GtGg~~~G~~~~~~~~~~~~~ii  184 (244)
T cd00640         156 AVVVPVGGGGNIAGIARALKELLPNVKVI  184 (244)
T ss_pred             EEEEecCccHHHHHHHHHHHHhCCCCEEE
Confidence            99999999999999999999999999986

This CD corresponds to aminocyclopropane-1-carboxylate deaminase (ACCD), tryptophan synthase beta chain (Trp-synth_B), cystathionine beta-synthase (CBS), O-acetylserine sulfhydrylase (CS), serine dehydratase (Ser-dehyd), threonine dehydratase (Thr-dehyd), diaminopropionate ammonia lyase (DAL), and threonine synthase (Thr-synth). ACCD catalyzes the conversion of 1-aminocyclopropane-1-carboxylate to alpha-ketobutyrate and ammonia. Tryptophan synthase folds into a tetramer, where the beta chain is the catalytic PLP-binding subunit and catalyzes the formation of L-tryptophan from indole and L-serine. CBS is a tetrameric hemeprotein that catalyzes condensation of serine and homocysteine to cystathionine. CS is a homodimer that catalyzes the formation of L-cysteine from O-acetyl-L-serine. Ser-dehy

>PRK07409 threonine synthase; Validated

Probab=100.00  E-value=3.7e-45  Score=313.70  Aligned_cols=180  Identities=26%  Similarity=0.284  Sum_probs=165.3

Q ss_pred             hhccccCCcceecccccCCCCceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHHHH
Q 028618           12 VTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAA   91 (206)
Q Consensus        12 i~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~alA~~a~~   91 (206)
                      ++..+++|||++++.++...|++||+|+|++|||||||||++.+++..+.++|.     ++||++|+||||.|+|++|+.
T Consensus        25 ~~l~~g~TPl~~~~~l~~~~g~~i~~K~E~~nptGSfKdR~a~~~l~~a~~~g~-----~~iv~aSsGN~g~alA~~a~~   99 (353)
T PRK07409         25 VTLGEGNTPLIPAPNLSELLGVEVYVKYEGLNPTGSFKDRGMTMAVTKAKEEGA-----KAVICASTGNTSASAAAYAAR   99 (353)
T ss_pred             ccCCCCCCCEEEchhhHHHhCCeEEEEecCCCCccchHHHHHHHHHHHHHHCCC-----CEEEEECCcHHHHHHHHHHHH
Confidence            577899999999999988888899999999999999999999999999998885     589999999999999999999


Q ss_pred             CCCcEEEEeCCC-CCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHHHHHHh
Q 028618           92 KQYRLIITMPAS-MSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWK  170 (206)
Q Consensus        92 ~g~~~~ivvp~~-~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~  170 (206)
                      +|++|++|||++ .++.|++.++.+||+|+.++.+  ++++.+.++++++++ +++++++ .|+.+ ..||.|++.||++
T Consensus       100 ~G~~~~ivvP~~~~~~~k~~~~~~~GA~Vi~~~~~--~~~~~~~a~~l~~~~-~~~~~~~-~n~~~-~~g~~t~~~EI~~  174 (353)
T PRK07409        100 AGLKAFVLIPEGKIALGKLAQAVMYGAEIIQIDGN--FDDALEIVRELAEKY-PVTLVNS-VNPYR-IEGQKTAAFEIVD  174 (353)
T ss_pred             cCCCEEEEEcCCCCchhhHHHHHhcCCEEEEECCC--HHHHHHHHHHHHHhc-CceecCC-CCchh-hhhHHHHHHHHHH
Confidence            999999999998 6899999999999999999986  789999999998886 4777775 58888 5799999999999


Q ss_pred             hhCCCCCEEEEccCcchHHHHHHHHHHhcCC
Q 028618          171 GSGGRIDALVSGIGTGGTITGAGKFLKEKNP  201 (206)
Q Consensus       171 q~~~~~d~vv~~vG~Gg~~aGi~~~~k~~~p  201 (206)
                      |++..||+||+|+|+||+++|++.+|++..+
T Consensus       175 q~~~~~d~iv~~vG~GG~~~Gi~~g~~~~~~  205 (353)
T PRK07409        175 ALGDAPDYHCIPVGNAGNITAYWKGYKEYHQ  205 (353)
T ss_pred             HhCCCCCEEEEeCCChHHHHHHHHHHHHHHH
Confidence            9976799999999999999999999998743

>PRK05638 threonine synthase; Validated

Probab=100.00  E-value=5.1e-45  Score=320.93  Aligned_cols=178  Identities=21%  Similarity=0.237  Sum_probs=165.8

Q ss_pred             hhccccCCcceecccccCCCCceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHHHH
Q 028618           12 VTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAA   91 (206)
Q Consensus        12 i~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~alA~~a~~   91 (206)
                      ++..+++|||++++ +++.+|.+||+|+|++|||||||||++.+++.+|.+.|.     ++|+++|+||||.|+|++|+.
T Consensus        60 v~l~~G~TPLv~~~-~~~~~g~~l~~K~E~~nPtGSfKdR~a~~~i~~a~~~g~-----~~vv~aSsGN~g~alA~~aa~  133 (442)
T PRK05638         60 ISLGEGGTPLIRAR-ISEKLGENVYIKDETRNPTGSFRDRLATVAVSYGLPYAA-----NGFIVASDGNAAASVAAYSAR  133 (442)
T ss_pred             cccCCCCCcEEccc-chHHhCCeEEEEeCCCCCCCChHHHHHHHHHHHHHHcCC-----CEEEEeCCChHHHHHHHHHHH
Confidence            56788999999984 666678899999999999999999999999999998875     679999999999999999999


Q ss_pred             CCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHHHHHHhh
Q 028618           92 KQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKG  171 (206)
Q Consensus        92 ~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~q  171 (206)
                      +|++|+||||+++++.|+++++.+||+|+.++.+  ++++.+.+++++++. ++|++++++||.+ ++||+|+++||++|
T Consensus       134 ~G~~~~i~vp~~~~~~k~~~~~~~GA~vi~v~~~--~~~~~~~a~~~~~~~-~~~~~~~~~np~~-~eG~~t~a~Ei~eq  209 (442)
T PRK05638        134 AGKEAFVVVPRKVDKGKLIQMIAFGAKIIRYGES--VDEAIEYAEELARLN-GLYNVTPEYNIIG-LEGQKTIAFELWEE  209 (442)
T ss_pred             cCCCEEEEEeCCCCHHHHHHHHhcCcEEEEECCC--HHHHHHHHHHHHHhC-CeEecCCCCChhH-hhhHHHHHHHHHHH
Confidence            9999999999999999999999999999999876  789999999988875 7999999999998 68999999999999


Q ss_pred             hCCCCCEEEEccCcchHHHHHHHHHHhcCC
Q 028618          172 SGGRIDALVSGIGTGGTITGAGKFLKEKNP  201 (206)
Q Consensus       172 ~~~~~d~vv~~vG~Gg~~aGi~~~~k~~~p  201 (206)
                      ++  ||+||+|+|+||+++|++.+|+++++
T Consensus       210 ~~--pD~vv~pvG~Gg~~~Gi~~gfkel~~  237 (442)
T PRK05638        210 IN--PTHVIVPTGSGSYLYSIYKGFKELLE  237 (442)
T ss_pred             HC--cCEEEEeCCchHHHHHHHHHHHHHHh
Confidence            95  99999999999999999999999865

>PRK06260 threonine synthase; Validated

Probab=100.00  E-value=5.8e-45  Score=316.76  Aligned_cols=180  Identities=26%  Similarity=0.256  Sum_probs=167.6

Q ss_pred             hhhccccCCcceecccccCCCCc-eEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHH
Q 028618           11 DVTELIGNTPLVYLNNIVNGCVA-RIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMA   89 (206)
Q Consensus        11 ~i~~~~~~TPl~~~~~l~~~~g~-~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~alA~~a   89 (206)
                      .++..+++|||++++++++.+|. +||+|+|++|||||||||++.+++..+.++|.     ++||++|+||||.|+|++|
T Consensus        60 ~v~l~~G~TPLv~~~~l~~~~g~~~l~~K~E~~nPTGSfKdRga~~~v~~a~~~g~-----~~vv~aSsGN~g~alA~~a  134 (397)
T PRK06260         60 IVSLNEGGTPLYRCPNLEKELGVKELYVKHEGANPTGSFKDRGMTVGVTKALELGV-----KTVACASTGNTSASLAAYA  134 (397)
T ss_pred             cccCCCCCCCeEEchhhHHHhCCCcEEEEeCCCCCCcCcHHHHHHHHHHHHHHcCC-----CEEEEeCCcHHHHHHHHHH
Confidence            47788999999999999888887 99999999999999999999999999999886     6899999999999999999


Q ss_pred             HHCCCcEEEEeCCC-CCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHHHHH
Q 028618           90 AAKQYRLIITMPAS-MSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPEL  168 (206)
Q Consensus        90 ~~~g~~~~ivvp~~-~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei  168 (206)
                      +.+|++|+||+|++ +++.|+.+++.+||+|+.++.+  ++++.+.+++++++. ++|+++++ ||.+ .+||.|+++||
T Consensus       135 a~~G~~~~i~vP~~~~~~~k~~~~~~~GA~vi~v~~~--~~~~~~~a~~~~~~~-g~y~~~~~-np~~-~~G~~t~a~Ei  209 (397)
T PRK06260        135 ARAGLKCYVLLPAGKVALGKLAQALLHGAKVLEVDGN--FDDALDMVVELAKEG-KIYLLNSI-NPFR-LEGQKTIGFEI  209 (397)
T ss_pred             HHcCCcEEEEEeCCCccHHHHHHHHhcCCEEEEECCc--HHHHHHHHHHHHhhC-CEEeecCC-Cchh-hcchhhHHHHH
Confidence            99999999999997 7899999999999999999987  788999999998886 78889887 8888 67999999999


Q ss_pred             HhhhCC-CCCEEEEccCcchHHHHHHHHHHhcC
Q 028618          169 WKGSGG-RIDALVSGIGTGGTITGAGKFLKEKN  200 (206)
Q Consensus       169 ~~q~~~-~~d~vv~~vG~Gg~~aGi~~~~k~~~  200 (206)
                      ++|+++ .||+||+|+|+||+++|++.+|+++.
T Consensus       210 ~eQl~~~~pd~vvvpvG~Gg~~~Gi~~~~~~l~  242 (397)
T PRK06260        210 ADQLGWEVPDRVVLPVGNAGNISAIWKGFKELV  242 (397)
T ss_pred             HHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHH
Confidence            999976 69999999999999999999999876

>PRK06721 threonine synthase; Reviewed

Probab=100.00  E-value=1.3e-44  Score=309.95  Aligned_cols=186  Identities=26%  Similarity=0.317  Sum_probs=166.8

Q ss_pred             hhhccccCCcceecccccCCCCceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHHH
Q 028618           11 DVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAA   90 (206)
Q Consensus        11 ~i~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~alA~~a~   90 (206)
                      .++..+++|||++++++++..|++||+|+|++||+||||+|++.+++.++.++|.     ++||++|+||||+|+|++|+
T Consensus        21 ~~~l~~G~TPl~~l~~l~~~~g~~i~~K~E~~nptGS~KdR~a~~~i~~a~~~g~-----~~vV~aSsGN~G~alA~~aa   95 (352)
T PRK06721         21 DVSLMEGNTPLIPLLNISKQLGIQLYGKYEGANPTGSFKDRGMVMAVAKAKEEGS-----EAIICASTGNTSASAAAYAA   95 (352)
T ss_pred             ccccCcCCCCeeEchhhHHHhCCeEEEEecCCCCccchHHHHHHHHHHHHHHCCC-----CEEEEECCcHHHHHHHHHHH
Confidence            4677899999999999988888899999999999999999999999999999886     68999999999999999999


Q ss_pred             HCCCcEEEEeCCCC-CHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHHHHHH
Q 028618           91 AKQYRLIITMPASM-SLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELW  169 (206)
Q Consensus        91 ~~g~~~~ivvp~~~-~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~  169 (206)
                      .+|++|++|||+.. ++.|+++++.+||+|+.++.+  ++++.+.+++++++. ++++++ +.|+.+ ..||.|++.||+
T Consensus        96 ~~G~~~~vvvp~~~~~~~k~~~~~~~GA~V~~~~~~--~~~~~~~a~~~~~~~-~~~~~~-~~n~~~-~~G~~t~~~Ei~  170 (352)
T PRK06721         96 RLGMKCIIVIPEGKIAHGKLAQAVAYGAEIISIEGN--FDDALKAVRNIAAEE-PITLVN-SVNPYR-IEGQKTAAFEIC  170 (352)
T ss_pred             HCCCcEEEEECCCCCCHHHHHHHHHcCCEEEEECCC--HHHHHHHHHHHHHhC-Cceecc-CCCchh-hhhhhhHHHHHH
Confidence            99999999999974 889999999999999999976  778889999998886 567665 568887 579999999999


Q ss_pred             hhhCCCCCEEEEccCcchHHHH----HHHHHHhcC-CCCeEC
Q 028618          170 KGSGGRIDALVSGIGTGGTITG----AGKFLKEKN-PNIKVR  206 (206)
Q Consensus       170 ~q~~~~~d~vv~~vG~Gg~~aG----i~~~~k~~~-p~~~vi  206 (206)
                      +|++..||+||+|+|+||+++|    ++.++|+.+ |++|||
T Consensus       171 eq~~~~~D~ivv~vG~GG~l~G~~~G~~~~lk~~~~~~~~vi  212 (352)
T PRK06721        171 DQLQRAPDVLAIPVGNAGNITAYWKGFCEYEKEKGYKKPRIH  212 (352)
T ss_pred             HHhCCCCCEEEEeCCchHHHHHHHHHHHHHHHhcCCCCCeEE
Confidence            9997679999999999999997    455566664 889886

>PRK06450 threonine synthase; Validated

Probab=100.00  E-value=1.7e-44  Score=307.20  Aligned_cols=170  Identities=23%  Similarity=0.247  Sum_probs=154.3

Q ss_pred             hhhccccCCcceecccccCCCCceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHHH
Q 028618           11 DVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAA   90 (206)
Q Consensus        11 ~i~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~alA~~a~   90 (206)
                      .++...|+|||++.+        +||+|+|++|||||||||++.+++..+.++|.     +.|+++|+||+|.|+|++|+
T Consensus        51 ~vslgeG~TPLv~~~--------~l~~K~E~~nPTGSfKDRga~~~i~~a~~~g~-----~~vv~aSsGN~g~slA~~aa  117 (338)
T PRK06450         51 FISLGEGRTPLIKKG--------NIWFKLDFLNPTGSYKDRGSVTLISYLAEKGI-----KQISEDSSGNAGASIAAYGA  117 (338)
T ss_pred             CCCCCCCCCCceecC--------CEEEEecCCCCcCCCHHHHHHHHHHHHHHcCC-----CEEEEECCcHHHHHHHHHHH
Confidence            477899999999864        69999999999999999999999999999875     68999999999999999999


Q ss_pred             HCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHHHHHHh
Q 028618           91 AKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWK  170 (206)
Q Consensus        91 ~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~  170 (206)
                      .+|++|+||||+++++.|+++++.+||+|+.++.+  ++++.+.    +++. +.+|+++++||.+ ++||+|+++||++
T Consensus       118 ~~G~~~~i~vP~~~~~~k~~~i~~~GA~vi~v~~~--~~~~~~~----a~~~-g~~~~~~~~np~~-ieG~kTia~EI~e  189 (338)
T PRK06450        118 AAGIEVKIFVPETASGGKLKQIESYGAEVVRVRGS--REDVAKA----AENS-GYYYASHVLQPQF-RDGIRTLAYEIAK  189 (338)
T ss_pred             HcCCCEEEEEcCCCCHHHHHHHHHcCCEEEEECCC--HHHHHHH----HHhc-CeEeccCCCCccH-HHHHHHHHHHHHH
Confidence            99999999999999999999999999999999987  5554443    4443 7788999999998 6899999999999


Q ss_pred             hhCC-CCCEEEEccCcchHHHHHHHHHHhcCC
Q 028618          171 GSGG-RIDALVSGIGTGGTITGAGKFLKEKNP  201 (206)
Q Consensus       171 q~~~-~~d~vv~~vG~Gg~~aGi~~~~k~~~p  201 (206)
                      |+++ .||+||+|+|+||+++|++++|+++.+
T Consensus       190 ql~~~~pD~vvvpvG~Ggll~Gi~~g~~el~~  221 (338)
T PRK06450        190 DLDWKIPNYVFIPVSAGTLLLGVYSGFKHLLD  221 (338)
T ss_pred             HcCCCCCCEEEEECCchHHHHHHHHHHHHHHh
Confidence            9974 599999999999999999999999865

>PRK08206 diaminopropionate ammonia-lyase; Provisional

Probab=100.00  E-value=6.6e-44  Score=309.80  Aligned_cols=195  Identities=23%  Similarity=0.180  Sum_probs=169.0

Q ss_pred             hhhhh--hccccCCcceecccccCCCC-ceEEEEeCCC-CCCCChhhHHHHHHHHHHHH--cCCC---------------
Q 028618            8 IAKDV--TELIGNTPLVYLNNIVNGCV-ARIAAKLEMM-EPCSSVKDRIGYSMISDAEA--KGLI---------------   66 (206)
Q Consensus         8 ~~~~i--~~~~~~TPl~~~~~l~~~~g-~~i~~K~E~~-~ptGS~K~R~a~~~~~~a~~--~g~~---------------   66 (206)
                      ...++  ...+++|||++++++++.+| .+||+|+|++ ||+||||+|++.+.+..+..  .+.-               
T Consensus        32 a~~~~~~~~~~~~TPL~~~~~l~~~~G~~~v~~K~E~~q~ptgSFK~RG~~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~  111 (399)
T PRK08206         32 ARAFHQSFPGYAPTPLVALPDLAAELGVGSILVKDESYRFGLNAFKALGGAYAVARLLAEKLGLDISELSFEELTSGEVR  111 (399)
T ss_pred             HHHHHhcCCCCCCCCCcchHHHHHHhCCCcEEEecccCcCCCCChHHhhHHHHHHHHHHHHhCCCcccCCHHHhhhhHHH
Confidence            45567  55889999999999999899 5999999998 59999999999998887753  2210               


Q ss_pred             --CCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCC
Q 028618           67 --TPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPN  144 (206)
Q Consensus        67 --~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~  144 (206)
                        .++ .+++++|+||||+|+|++|+.+|++|+||||.++++.|+..++.+||+|+.++.+  ++++...+.+++++. +
T Consensus       112 ~~~~~-~~vv~aSsGN~g~alA~~a~~~G~~~~Ivvp~~~~~~k~~~i~~~GA~Vi~v~~~--~~~~~~~a~~~~~~~-g  187 (399)
T PRK08206        112 EKLGD-ITFATATDGNHGRGVAWAAQQLGQKAVIYMPKGSSEERVDAIRALGAECIITDGN--YDDSVRLAAQEAQEN-G  187 (399)
T ss_pred             HhccC-CEEEEeCCcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEeCCC--HHHHHHHHHHHHHHc-C
Confidence              011 3699999999999999999999999999999999999999999999999999976  788999999988886 7


Q ss_pred             eEEcC-----CCCC-CccHHHHHHhHHHHHHhhhCC---CCCEEEEccCcchHHHHHHHHHHhcC--CCCeEC
Q 028618          145 AYMLQ-----QFEN-PANPKIHYETTGPELWKGSGG---RIDALVSGIGTGGTITGAGKFLKEKN--PNIKVR  206 (206)
Q Consensus       145 ~~~~~-----~~~~-~~~~~~g~~t~~~Ei~~q~~~---~~d~vv~~vG~Gg~~aGi~~~~k~~~--p~~~vi  206 (206)
                      ++|++     ||+| +.+.+.||.|++.||++|+++   .||+||+|+|+||+++|++.+|++++  |.+|||
T Consensus       188 ~~~v~~~~~~~~~~~~~~~~~G~~t~a~EI~eQl~~~~~~pD~vvvpvG~GG~~aGi~~~~k~~~~~~~~kii  260 (399)
T PRK08206        188 WVVVQDTAWEGYEEIPTWIMQGYGTMADEAVEQLKEMGVPPTHVFLQAGVGSLAGAVLGYFAEVYGEQRPHFV  260 (399)
T ss_pred             CEEecCccccCcccccHHHHHHhHHHHHHHHHHHHhcCCCCCEEEEcCCccHHHHHHHHHHHHHcCCCCCEEE
Confidence            88886     6775 566688999999999999965   59999999999999999999999984  467775

>PLN02569 threonine synthase

Probab=100.00  E-value=1.3e-43  Score=313.10  Aligned_cols=184  Identities=19%  Similarity=0.142  Sum_probs=166.7

Q ss_pred             hhccccCCcceecccccCC-CCc-eEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHH
Q 028618           12 VTELIGNTPLVYLNNIVNG-CVA-RIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMA   89 (206)
Q Consensus        12 i~~~~~~TPl~~~~~l~~~-~g~-~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~alA~~a   89 (206)
                      ++..+++|||++++++++. +|. +||+|+|++|||||||||++.+++..+.+.|........|+++|+||||.|+|++|
T Consensus       127 vsl~eG~TPLv~~~~l~~~~~G~~~l~~K~E~~nPTGSFKDRga~~~vs~a~~~g~~~~~~~~Vv~ASSGN~GaAlAaya  206 (484)
T PLN02569        127 VSLFEGNSNLFWAERLGKEFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMAKPVVGVGCASTGDTSAALSAYC  206 (484)
T ss_pred             eecCCCCCceeEhhhhhHhhcCCccEEEEECCCCCCcCHHHHHHHHHHHHHHHhhhccCCccEEEEeCCcHHHHHHHHHH
Confidence            6778899999999999887 784 99999999999999999999999999988765321125799999999999999999


Q ss_pred             HHCCCcEEEEeCCC-CCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHHHHH
Q 028618           90 AAKQYRLIITMPAS-MSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPEL  168 (206)
Q Consensus        90 ~~~g~~~~ivvp~~-~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei  168 (206)
                      +.+|++|+||+|++ .+..|+.+++.+||+|+.++++  ++++.+.+++++++. ++|+++++ ||.+ ++||+|+++||
T Consensus       207 a~~Gl~~~I~vP~~~~~~~k~~qi~a~GA~Vi~v~g~--~d~a~~~a~e~~~~~-~~~~~n~~-Np~~-ieG~kT~a~EI  281 (484)
T PLN02569        207 AAAGIPSIVFLPADKISIAQLVQPIANGALVLSIDTD--FDGCMRLIREVTAEL-PIYLANSL-NSLR-LEGQKTAAIEI  281 (484)
T ss_pred             HhcCCeEEEEEcCCCCCHHHHHHHHhcCCEEEEECCC--HHHHHHHHHHHHHHc-CCEecCCC-Ccch-hHhHHHHHHHH
Confidence            99999999999997 7889999999999999999987  889999999988876 68899987 8988 68999999999


Q ss_pred             HhhhCCC-CCEEEEccCcchHHHHHHHHHHhcC
Q 028618          169 WKGSGGR-IDALVSGIGTGGTITGAGKFLKEKN  200 (206)
Q Consensus       169 ~~q~~~~-~d~vv~~vG~Gg~~aGi~~~~k~~~  200 (206)
                      ++|++++ ||+||+|+|+||+++|++++|+++.
T Consensus       282 ~eQl~~~~pD~VvvPvG~Gg~l~Gi~kgfkel~  314 (484)
T PLN02569        282 LQQFDWEVPDWVIVPGGNLGNIYAFYKGFKMCK  314 (484)
T ss_pred             HHHcCCCCCCEEEEeCCchHHHHHHHHHHHHHH
Confidence            9999765 9999999999999999999999863

>KOG1251 consensus Serine racemase [Signal transduction mechanisms; Amino acid transport and metabolism]

Probab=100.00  E-value=2.4e-44  Score=284.92  Aligned_cols=192  Identities=22%  Similarity=0.341  Sum_probs=179.0

Q ss_pred             cchhhhhhccccCCcceecccccCCCCceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHH
Q 028618            6 SNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGL   85 (206)
Q Consensus         6 ~~~~~~i~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~al   85 (206)
                      ...|+++.+++..||.+.++.+-+..|.+||+|+|++|.+||||.|||.+.+..+.++..    .+++++.||||||+|+
T Consensus        13 ~~A~~rik~~ihkTpVlTS~~ln~~~g~~vfFKcE~fQKtGaFKfRGAlNav~~l~~ek~----~kgvithSSGNHaqAl   88 (323)
T KOG1251|consen   13 RAAHQRIKPFIHKTPVLTSENLNEKVGRHVFFKCENFQKTGAFKFRGALNAVSSLKAEKR----AKGVITHSSGNHAQAL   88 (323)
T ss_pred             HHHHHHHHhhhccCceechhhHHHHhhhheEeehhhhhhccceehhhhHHHHHHhhHhhh----cCceEeecCCcHHHHH
Confidence            346889999999999999999999999999999999999999999999999998874443    2689999999999999


Q ss_pred             HHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHH
Q 028618           86 AFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTG  165 (206)
Q Consensus        86 A~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~  165 (206)
                      |++|+..|+|++||||.++|..|+..++.||++|+++++.  .+++.+.+.++.++. +.+.++||++|.. +.|++|++
T Consensus        89 alaAk~~giPa~IVvP~~AP~~Kv~a~~~Yga~ii~~e~~--~~sRE~va~~ltee~-g~~~i~Py~~p~v-IaGqgTiA  164 (323)
T KOG1251|consen   89 ALAAKILGIPATIVVPKDAPICKVAATRGYGANIIFCEPT--VESRESVAKDLTEET-GYYLIHPYNHPSV-IAGQGTIA  164 (323)
T ss_pred             HHHHHhcCCCeEEEecCCChHHHHHHHHhcCceEEEecCc--cchHHHHHHHHHHhc-CcEEeCCCCCcce-eeccchHH
Confidence            9999999999999999999999999999999999999987  558888899999987 7888999999998 79999999


Q ss_pred             HHHHhhhCCCCCEEEEccCcchHHHHHHHHHHhcCCCCeEC
Q 028618          166 PELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKVR  206 (206)
Q Consensus       166 ~Ei~~q~~~~~d~vv~~vG~Gg~~aGi~~~~k~~~p~~~vi  206 (206)
                      .|+++|+ +.+|++|+|+|+||+++|++.+.+.+.|+++||
T Consensus       165 ~ElleqV-g~iDalfvpvgGGGllSgvAlaa~~l~P~i~vy  204 (323)
T KOG1251|consen  165 LELLEQV-GEIDALFVPVGGGGLLSGVALAAKSLKPSIEVY  204 (323)
T ss_pred             HHHHHhh-CccceEEEeecCcchhhHHHHHHhccCCCcEEE
Confidence            9999999 589999999999999999999999999999986

>PRK08329 threonine synthase; Validated

Probab=100.00  E-value=1.4e-43  Score=303.08  Aligned_cols=172  Identities=22%  Similarity=0.277  Sum_probs=158.5

Q ss_pred             hhccccCCcceecccccCCCCceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHHHH
Q 028618           12 VTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAA   91 (206)
Q Consensus        12 i~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~alA~~a~~   91 (206)
                      ++...+.|||+++.       .+||+|+|++|||||||||++.+++..+.++|.     ++||++|+||||+|+|++|++
T Consensus        58 ~sl~eg~Tpl~~~~-------~~l~~K~E~~nPtGSfKdRga~~~i~~a~~~g~-----~~vv~aSsGN~g~alA~~aa~  125 (347)
T PRK08329         58 PHLTPPITPTVKRS-------IKVYFKLDYLQPTGSFKDRGTYVTVAKLKEEGI-----NEVVIDSSGNAALSLALYSLS  125 (347)
T ss_pred             CcCCCCCCccccCC-------CeEEEEeCCCCCCcCCHHHHHHHHHHHHHHcCC-----CEEEEECCCcHHHHHHHHHHH
Confidence            46677899999873       489999999999999999999999999999986     689999999999999999999


Q ss_pred             CCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHHHHHHhh
Q 028618           92 KQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKG  171 (206)
Q Consensus        92 ~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~q  171 (206)
                      +|++|+||||.++++.|+.+++.+||+|+.++++  ++++.+.+++++++. +++|++++.||.+ .+||+|+++||++|
T Consensus       126 ~G~~~~v~vp~~~~~~k~~~~~~~GA~v~~v~~~--~~~~~~~a~~l~~~~-~~~~~~~~~np~~-~eG~~t~~~Ei~eq  201 (347)
T PRK08329        126 EGIKVHVFVSYNASKEKISLLSRLGAELHFVEGD--RMEVHEEAVKFSKRN-NIPYVSHWLNPYF-LEGTKTIAYEIYEQ  201 (347)
T ss_pred             cCCcEEEEECCCChHHHHHHHHHcCCEEEEECCC--HHHHHHHHHHHHHhc-CCeeccCCCCchh-hccchhHHHHHHHH
Confidence            9999999999999999999999999999999986  567788888888875 7788999999998 68999999999999


Q ss_pred             hCCCCCEEEEccCcchHHHHHHHHHHhcC
Q 028618          172 SGGRIDALVSGIGTGGTITGAGKFLKEKN  200 (206)
Q Consensus       172 ~~~~~d~vv~~vG~Gg~~aGi~~~~k~~~  200 (206)
                      ++ .||+||+|+|+||+++|++++|+++.
T Consensus       202 l~-~pD~vvvpvG~Gg~l~Gi~~g~kel~  229 (347)
T PRK08329        202 IG-VPDYAFVPVGSGTLFLGIWKGFKELH  229 (347)
T ss_pred             cC-CCCEEEEeCCcHHHHHHHHHHHHHHH
Confidence            95 79999999999999999999999974

>TIGR01747 diampropi_NH3ly diaminopropionate ammonia-lyase family

Probab=100.00  E-value=6.2e-42  Score=295.01  Aligned_cols=194  Identities=22%  Similarity=0.215  Sum_probs=164.8

Q ss_pred             hhhhhhccccCCcceecccccCCCC-ceEEEEeCCCCC-CCChhhHHHHHHHHHHHHc----------------CCCC--
Q 028618            8 IAKDVTELIGNTPLVYLNNIVNGCV-ARIAAKLEMMEP-CSSVKDRIGYSMISDAEAK----------------GLIT--   67 (206)
Q Consensus         8 ~~~~i~~~~~~TPl~~~~~l~~~~g-~~i~~K~E~~~p-tGS~K~R~a~~~~~~a~~~----------------g~~~--   67 (206)
                      .+.++..+ .+|||++++.|++.+| .+||+|+|++|+ +||||+||+.+.+..+.++                +.+.  
T Consensus        13 ~~~~~~~~-~~TPL~~~~~l~~~~g~~~v~~K~E~~~~~tgSFK~RG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (376)
T TIGR01747        13 FHKKIPGY-RPTPLCALDHLANLLGLKKILVKDESKRFGLNAFKMLGGSYAIAQYLAEKLHLDIETLSFEHLKNDAIGEK   91 (376)
T ss_pred             HHHhCCCC-CCCCCcchHHHHHHhCCCcEEEeeCCCCCCCCChHHHHHHHHHHHHHHHHhCCCcccCCHHHHhhhHHHhh
Confidence            44555444 9999999999999999 499999999985 8999999999999887543                1111  


Q ss_pred             CCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEE
Q 028618           68 PGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYM  147 (206)
Q Consensus        68 ~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~  147 (206)
                      .+..+||++|+||||+|+|++|+.+|++|+||||+++++.|+.+++.+||+|+.++.+  ++++.+.+++++++. ++++
T Consensus        92 ~~~~~vv~aSsGN~g~a~A~~Aa~~G~~~~I~vP~~~~~~k~~~i~~~GAeVi~v~~~--~~~a~~~a~~~~~~~-g~~~  168 (376)
T TIGR01747        92 MGQATFATATDGNHGRGVAWAAQQLGQKAVVYMPKGSAQERVENILNLGAECTITDMN--YDDTVRLAMQMAQQH-GWVV  168 (376)
T ss_pred             cCCCEEEEECccHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHhCCCEEEEECCC--HHHHHHHHHHHHHhc-CcEE
Confidence            1236899999999999999999999999999999999999999999999999999986  788999999988876 6888


Q ss_pred             cC-----CCCC--CccHHHHHHhHHHHHHhhhCC----CCCEEEEccCcchHHHHHHHHHHhcCC-C-CeEC
Q 028618          148 LQ-----QFEN--PANPKIHYETTGPELWKGSGG----RIDALVSGIGTGGTITGAGKFLKEKNP-N-IKVR  206 (206)
Q Consensus       148 ~~-----~~~~--~~~~~~g~~t~~~Ei~~q~~~----~~d~vv~~vG~Gg~~aGi~~~~k~~~p-~-~~vi  206 (206)
                      ++     +|+|  |.. +.||+|+++||++|++.    .||+||+|+|+||+++|++.++++..+ + .+||
T Consensus       169 ~~~~~~~~~~~~~~~i-i~G~~Tia~Ei~eQl~~~~~~~pD~vvvpvG~GGl~~Gi~~~~~~~~~~~~p~vi  239 (376)
T TIGR01747       169 VQDTAWEGYEKIPTWI-MQGYATLADEAVEQLREMGSVTPTHVLLQAGVGSMAGGVLGYFVDVYSENNPHSI  239 (376)
T ss_pred             eccccccccccCCchH-HHHHHHHHHHHHHHhhccCCCCCCEEEECCchhHHHHHHHHHHHHhcCCCCCEEE
Confidence            76     4666  433 68999999999999962    699999999999999999999987754 3 3664

This small subfamily includes diaminopropionate ammonia-lyase from Salmonella typhimurium and a small number of close homologs, about 50 % identical in sequence. The enzyme is a pyridoxal phosphate-binding homodimer homologous to threonine dehydratase (threonine deaminase).

>KOG1481 consensus Cysteine synthase [Amino acid transport and metabolism]

Probab=100.00  E-value=1.3e-42  Score=279.67  Aligned_cols=198  Identities=44%  Similarity=0.668  Sum_probs=176.6

Q ss_pred             chhhhhhccccCCcceecccccCCCCceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHH
Q 028618            7 NIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLA   86 (206)
Q Consensus         7 ~~~~~i~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~alA   86 (206)
                      .+.+-+...||+|||+++..|++..||+|+.|.|.+||.||.|||.|.+++..|++.|++.+| -.|++.|+||+|.++|
T Consensus        38 ~~~~Gv~~~IGnTpliri~sLs~aTGcnIlaK~Ef~NPggS~KDRvAl~iir~Aee~GkL~~g-g~v~EGtaGsTgIslA  116 (391)
T KOG1481|consen   38 GIVSGVEGAIGNTPLIRINSLSNATGCNILAKAEFLNPGGSVKDRVALYIIRTAEEKGKLVRG-GTVVEGTAGSTGISLA  116 (391)
T ss_pred             CccchhHHhhCCCceEEeeccccccccchhhhhhccCCCCChhhhhHHHHHHHHHHcCCcccC-ceEEecCCCccchhHH
Confidence            344567889999999999999999999999999999999999999999999999999999998 5799999999999999


Q ss_pred             HHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCC--ChHHHHHHHHHHHHhCCC------eEEcCCCCCCccHH
Q 028618           87 FMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAK--GMKGAVQKAEEILAKTPN------AYMLQQFENPANPK  158 (206)
Q Consensus        87 ~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~--~~~~~~~~a~~~~~~~~~------~~~~~~~~~~~~~~  158 (206)
                      ..|..+|++|+|+||.+.+.+|.+.++.+||+|..|++..  +-+.-+..|++.+.+.++      .+|.+||+|+.||.
T Consensus       117 ~v~~a~Gyk~~I~mPddqs~eK~~ile~LGA~V~rV~pa~i~dp~~yvn~Arr~an~~~~~~ngi~g~fAdQFeN~AN~~  196 (391)
T KOG1481|consen  117 HVARALGYKCHIYMPDDQSQEKSDILEFLGAEVHRVPPAPIVDPNHYVNQARRAANETPNASNGIRGWFADQFENVANWL  196 (391)
T ss_pred             HhhhhcCcceEEECCChHHHHHHHHHHHhcceeeecCCcCccChhHHHHHHHHHhhhcccccCCcccchhhhhcCHHHHH
Confidence            9999999999999999999999999999999999997653  123445555555544332      25679999999999


Q ss_pred             HHHHhHHHHHHhhhCCCCCEEEEccCcchHHHHHHHHHHhcCCC-CeE
Q 028618          159 IHYETTGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPN-IKV  205 (206)
Q Consensus       159 ~g~~t~~~Ei~~q~~~~~d~vv~~vG~Gg~~aGi~~~~k~~~p~-~~v  205 (206)
                      .||.++|+|||.|..+.+|++++.+|||||++|+.+++|+.++. +++
T Consensus       197 aHyetTGPEIw~QtkGniDaFia~~GTGGTiaGVskyLkek~~~~v~~  244 (391)
T KOG1481|consen  197 AHYETTGPEIWHQTKGNIDAFIAGTGTGGTIAGVSKYLKEKSDGRVAV  244 (391)
T ss_pred             HHhcCcCcHHHHhhcCCcceEEeccCCCcchHHHHHHHhhcCCCceEE
Confidence            99999999999999999999999999999999999999998875 544

>TIGR00260 thrC threonine synthase

Probab=100.00  E-value=4.8e-42  Score=291.82  Aligned_cols=179  Identities=24%  Similarity=0.209  Sum_probs=161.8

Q ss_pred             hhhccccCCcceecccccCCCCc-eEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHH
Q 028618           11 DVTELIGNTPLVYLNNIVNGCVA-RIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMA   89 (206)
Q Consensus        11 ~i~~~~~~TPl~~~~~l~~~~g~-~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~alA~~a   89 (206)
                      .+...+++|||+++++++...|. +||+|+|++|||||||||++.+++..+.++|.     .+||++|+||||.|+|++|
T Consensus        16 ~~~l~~g~TPl~~~~~l~~~~g~~~i~~K~E~~nptGSfKdR~a~~~l~~a~~~g~-----~~vv~aSsGN~g~a~A~~a   90 (328)
T TIGR00260        16 LVDLGEGVTPLFRSPALVANVGIKNLYVLELFHNPTLSFKDRGMAVALTKALELGN-----DTVLCASTGNTGAAAAAYA   90 (328)
T ss_pred             hhhhccCCccCccchHHHHhcCCccEEehhhccCCchhhHhhhHHHHHHHHHHcCC-----CEEEEeCCcHHHHHHHHHh
Confidence            35667799999999999888887 99999999999999999999999999998885     5899999999999999999


Q ss_pred             HHCCCcEEEEeCCC-CCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEcCCCCC--CccHHHHHHhHHH
Q 028618           90 AAKQYRLIITMPAS-MSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFEN--PANPKIHYETTGP  166 (206)
Q Consensus        90 ~~~g~~~~ivvp~~-~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~--~~~~~~g~~t~~~  166 (206)
                      +.+|++|++|+|+. +++.|++.++.+||+|+.++.+  ++++.+.+++++++. +.+++++ .|  |.+ ..||.|+++
T Consensus        91 ~~~g~~~~v~~p~~~~s~~k~~~~~~~GA~Vi~~~~~--~~~~~~~~~~~~~~~-~~~~~~~-~n~~~~~-~~g~~t~~~  165 (328)
T TIGR00260        91 GKAGVKVVILYPAGKISLGKLAQALGYNAEVVAIDGN--FDDAQRLVKQLFGDK-EALGLNS-VNSIPYR-LEGQKTYAF  165 (328)
T ss_pred             ccCCCcEEEEECCCCCCHHHHHHHHhcCcEEEEecCC--HHHHHHHHHHHHhhc-Ceeeccc-CCCCCeE-eeeehhHHH
Confidence            99999999999998 8999999999999999999986  789999999998876 4555554 44  776 579999999


Q ss_pred             HHHhhhCC-CCCEEEEccCcchHHHHHHHHHHhc
Q 028618          167 ELWKGSGG-RIDALVSGIGTGGTITGAGKFLKEK  199 (206)
Q Consensus       167 Ei~~q~~~-~~d~vv~~vG~Gg~~aGi~~~~k~~  199 (206)
                      ||++|+++ .||+||+|+|+||+++|++.+|+++
T Consensus       166 Ei~~q~~~~~~d~iv~~vG~GG~~~G~~~~~~~~  199 (328)
T TIGR00260       166 EAVEQLGWEAPDKVVVPVPNSGNFGAILKGFKEK  199 (328)
T ss_pred             HHHHHhCCCCCCEEEEECCCcchHHHHHHHHHHH
Confidence            99999975 7999999999999999999999984

Involved in threonine biosynthesis it catalyses the reaction O-PHOSPHO-L-HOMOSERINE + H(2)O = L-THREONINE + ORTHOPHOSPHATE using pyridoxal phosphate as a cofactor. the enzyme is distantly related to the serine/threonine dehydratases which are also pyridoxal-phosphate dependent enzymes. the pyridoxal-phosphate binding site is a Lys (K) residues present at residue 70 of the model.

>TIGR01275 ACC_deam_rel pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family

Probab=100.00  E-value=1.8e-41  Score=286.33  Aligned_cols=185  Identities=21%  Similarity=0.184  Sum_probs=156.1

Q ss_pred             cccCCcceecccccCCCCceEEEEeCCCCCC--CChhhHHHHHHHHHHHHcCCCCCCCeEEEee--CCCchHHHHHHHHH
Q 028618           15 LIGNTPLVYLNNIVNGCVARIAAKLEMMEPC--SSVKDRIGYSMISDAEAKGLITPGESVLIEP--TSGNTGIGLAFMAA   90 (206)
Q Consensus        15 ~~~~TPl~~~~~l~~~~g~~i~~K~E~~~pt--GS~K~R~a~~~~~~a~~~g~~~~~~~~vv~a--SsGN~g~alA~~a~   90 (206)
                      ...+|||++++.++...|.+||+|+|++||+  ||||+|++.+++..++++|.     +.||++  |+||||+|+|++|+
T Consensus         4 ~~~~TPl~~~~~l~~~~g~~l~~K~E~l~p~~~gs~K~R~~~~~l~~a~~~g~-----~~vv~~g~ssGN~g~alA~~a~   78 (311)
T TIGR01275         4 IPWPTPIQYLPRISREIGAEIYIKRDDLTGLGIGGNKIRKLEYLLADALSKGA-----DTVITVGAIQSNHARATALAAK   78 (311)
T ss_pred             CCCCCcceechhhhhhcCCeEEEEeccCcCCCCCchhHHHHHHHHHHHHHcCC-----CEEEEcCCchhHHHHHHHHHHH
Confidence            3478999999999888889999999999998  99999999999999999986     578887  66999999999999


Q ss_pred             HCCCcEEEEeCCCC-CHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHH----hCC-CeEEcCCCCCCccHHHHHHhH
Q 028618           91 AKQYRLIITMPASM-SLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILA----KTP-NAYMLQQFENPANPKIHYETT  164 (206)
Q Consensus        91 ~~g~~~~ivvp~~~-~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~----~~~-~~~~~~~~~~~~~~~~g~~t~  164 (206)
                      .+|+++++|||+.. +..+..+++.+||+|+.++... +.+..+.+.++++    +.+ .+++++++.|+.+ ..|+.++
T Consensus        79 ~~G~~~~ivvp~~~~~~~~~~~~~~~Ga~v~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~~g~~~~  156 (311)
T TIGR01275        79 KLGLDAVLVLREKEELNGNLLLDKLMGAETRVYSAEE-YFEIMKYAEELAEELEKEGRKPYVIPVGGSNSLG-TLGYVEA  156 (311)
T ss_pred             HhCCceEEEecCCccCCCCHHHHHHcCCEEEEECchh-hhhhHHHHHHHHHHHHhcCCCeEEECCCCCcHHH-HHHHHHH
Confidence            99999999999975 4556777899999999998632 3344444444433    322 2445688888887 4677789


Q ss_pred             HHHHHhhhCC--CCCEEEEccCcchHHHHHHHHHHhcCCCCeEC
Q 028618          165 GPELWKGSGG--RIDALVSGIGTGGTITGAGKFLKEKNPNIKVR  206 (206)
Q Consensus       165 ~~Ei~~q~~~--~~d~vv~~vG~Gg~~aGi~~~~k~~~p~~~vi  206 (206)
                      +.||++|++.  .||+||+|+|||||++|++.+||+.+|+++||
T Consensus       157 ~~EI~~q~~~~~~~D~vv~~vGtGgt~~Gi~~~lk~~~~~~~vi  200 (311)
T TIGR01275       157 VLEIATQLESEVKFDSIVVAAGSGGTIAGLSLGLSILNEDIRPV  200 (311)
T ss_pred             HHHHHHHHhcCCCCCEEEEeCCcHHHHHHHHHHHHHhCCCCcEE
Confidence            9999999963  69999999999999999999999999999975

This model represents a family of pyridoxal phosphate-dependent enzymes closely related to (and often designated as putative examples of) 1-aminocyclopropane-1-carboxylate deaminase. It appears that members of this family include both D-cysteine desulfhydrase (EC 4.4.1.15) and 1-aminocyclopropane-1-carboxylate deaminase (EC 3.5.99.7).

>TIGR03528 2_3_DAP_am_ly diaminopropionate ammonia-lyase

Probab=100.00  E-value=2.5e-41  Score=292.96  Aligned_cols=190  Identities=22%  Similarity=0.172  Sum_probs=159.9

Q ss_pred             ccccCCcceecccccCCCC-ceEEEEeCCCCC-CCChhhHHHHHHHHHHH--HcCCC--------------C--CCCeEE
Q 028618           14 ELIGNTPLVYLNNIVNGCV-ARIAAKLEMMEP-CSSVKDRIGYSMISDAE--AKGLI--------------T--PGESVL   73 (206)
Q Consensus        14 ~~~~~TPl~~~~~l~~~~g-~~i~~K~E~~~p-tGS~K~R~a~~~~~~a~--~~g~~--------------~--~~~~~v   73 (206)
                      ..+.+|||++++.|++.+| .+||+|+|++|+ |||||+||+.+.+..+.  +.|..              .  ....+|
T Consensus        37 ~~~~~TPL~~~~~L~~~~g~~~v~lK~E~~q~~tGSFK~RGa~~~v~~l~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~v  116 (396)
T TIGR03528        37 PGYQPTPLAELDNLAKHLGVGSILVKDESYRFGLNAFKVLGGSYAIGKYLAEKLGKDISELSFEKLKSNEIREKLGDITF  116 (396)
T ss_pred             CCCcCCCCcchHHHHHHhCCCcEEEeeCCCCCCcCChHHHHHHHHHHHHHHHHhCCCcccccHHHhhhHHHHhhccCcEE
Confidence            3568999999999999899 599999999985 99999999999998753  22210              0  011379


Q ss_pred             EeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEcC----
Q 028618           74 IEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQ----  149 (206)
Q Consensus        74 v~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~----  149 (206)
                      |++|+||||+|+|++|+.+|++|+||||+++++.|++.++.+||+|+.++.+  ++++.+.+++++++. +++|++    
T Consensus       117 v~aSsGN~g~alA~~aa~~Gi~~~IvvP~~~~~~K~~~ir~~GAeVi~~~~~--~~~a~~~a~~~a~~~-g~~~v~~~~~  193 (396)
T TIGR03528       117 VTATDGNHGRGVAWAANQLGQKSVVYMPKGSAQIRLENIRAEGAECTITDLN--YDDAVRLAWKMAQEN-GWVMVQDTAW  193 (396)
T ss_pred             EEECccHHHHHHHHHHHHcCCCEEEEEeCCCcHHHHHHHHhcCCEEEEECCC--HHHHHHHHHHHHHhc-CcEeeccccc
Confidence            9999999999999999999999999999999999999999999999999976  788999999998886 788875    


Q ss_pred             -CCCCCc-cHHHHHHhHHHHHHhhhC----CCCCEEEEccCcchHHHHHHHHHHhc-CCCC-eEC
Q 028618          150 -QFENPA-NPKIHYETTGPELWKGSG----GRIDALVSGIGTGGTITGAGKFLKEK-NPNI-KVR  206 (206)
Q Consensus       150 -~~~~~~-~~~~g~~t~~~Ei~~q~~----~~~d~vv~~vG~Gg~~aGi~~~~k~~-~p~~-~vi  206 (206)
                       +|+|.. ..+.||+|++.||++|++    +.||+||+|+|+||+++|++.++++. .+++ +||
T Consensus       194 ~~~~~~~~~~i~G~~Tig~EI~eQl~~~~~~~pD~vvvpvG~Ggl~~gi~~~~~~~~~~~~p~vi  258 (396)
T TIGR03528       194 EGYEKIPTWIMQGYGTLALEALEQLKEQGVEKPTHVFLQAGVGSFAGAVQGYFASAYGEERPITV  258 (396)
T ss_pred             cccccCchHHHHHHhHHHHHHHHHHhhcCCCCCCEEEEcCCcchHHHHHHHHHHHhcCCCCCEEE
Confidence             676632 235799999999999996    26999999999999999999999654 3443 553

Members of this protein family are the homodimeric, pyridoxal phosphate enzyme diaminopropionate ammonia-lyase, which adds water to remove two amino groups, leaving pyruvate.

>PRK03910 D-cysteine desulfhydrase; Validated

Probab=100.00  E-value=1.2e-40  Score=283.68  Aligned_cols=192  Identities=22%  Similarity=0.210  Sum_probs=163.0

Q ss_pred             hhhhhccccCCcceecccccCCCCceEEEEeCCCCCC--CChhhHHHHHHHHHHHHcCCCCCCCeEEEeeC--CCchHHH
Q 028618            9 AKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPC--SSVKDRIGYSMISDAEAKGLITPGESVLIEPT--SGNTGIG   84 (206)
Q Consensus         9 ~~~i~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~pt--GS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aS--sGN~g~a   84 (206)
                      +.++...+++|||++++.+++..|.+||+|+|++||+  ||||+|++.+++..+.++|.     ++||+++  +||||.|
T Consensus         6 ~~~~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~lnp~g~gs~K~R~~~~~l~~a~~~g~-----~~vvt~g~s~gN~g~a   80 (331)
T PRK03910          6 FPRLELAGLPTPLEPLPRLSAALGPDIYIKRDDLTGLALGGNKTRKLEFLLADALAQGA-----DTLITAGAIQSNHARQ   80 (331)
T ss_pred             CCCccccCCCCCceEhhhhhHhhCCcEEEEeccCCCCCCCchHHHHHHHHHHHHHHcCC-----CEEEEcCcchhHHHHH
Confidence            4557789999999999999887889999999999997  59999999999999998886     5678764  4899999


Q ss_pred             HHHHHHHCCCcEEEEeCCCCCH--------HHHHHHHHcCCEEEEeCCCCChH-HHHHHHHHHHHhCCCeE-EcCCCCCC
Q 028618           85 LAFMAAAKQYRLIITMPASMSL--------ERRIILRAFGAELVLTDPAKGMK-GAVQKAEEILAKTPNAY-MLQQFENP  154 (206)
Q Consensus        85 lA~~a~~~g~~~~ivvp~~~~~--------~~~~~~~~~Ga~v~~~~~~~~~~-~~~~~a~~~~~~~~~~~-~~~~~~~~  154 (206)
                      +|++|+.+|++|++|||++.++        .++..++.+||+|+.++.+.+.. .+...++++.++.+..+ +.+++.|+
T Consensus        81 lA~~a~~~G~~~~i~vp~~~~~~~~~~~~~~~~~~~~~~Ga~vi~~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~  160 (331)
T PRK03910         81 TAAAAAKLGLKCVLLLENPVPTEAENYLANGNVLLDDLFGAEIHVVPAGTDMDAQLEELAEELRAQGRRPYVIPVGGSNA  160 (331)
T ss_pred             HHHHHHHhCCcEEEEEcCCCCcccccccCCCcHHHHHHcCCEEEEeCccchHHHHHHHHHHHHHHcCCceEEECCCCCCc
Confidence            9999999999999999998775        45589999999999998753222 34455666666643334 45678888


Q ss_pred             ccHHHHHHhHHHHHHhhhCC---CCCEEEEccCcchHHHHHHHHHHhcCCCCeEC
Q 028618          155 ANPKIHYETTGPELWKGSGG---RIDALVSGIGTGGTITGAGKFLKEKNPNIKVR  206 (206)
Q Consensus       155 ~~~~~g~~t~~~Ei~~q~~~---~~d~vv~~vG~Gg~~aGi~~~~k~~~p~~~vi  206 (206)
                      .+ ..||.+++.||++|++.   .||+||+|+|||||++|++.+|++.+|+++||
T Consensus       161 ~~-~~g~~~~~~Ei~~q~~~~~~~~d~vv~~vGtGgt~~Gi~~~~k~~~~~~~vi  214 (331)
T PRK03910        161 LG-ALGYVACALEIAQQLAEGGVDFDAVVVASGSGGTHAGLAAGLAALGPDIPVI  214 (331)
T ss_pred             hh-HHHHHHHHHHHHHHHHhcCCCCCEEEEeCCcHHHHHHHHHHHHHhCCCCeEE
Confidence            88 56889999999999963   69999999999999999999999999999986

>PF00291 PALP: Pyridoxal-phosphate dependent enzyme; InterPro: IPR001926 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal)

Probab=100.00  E-value=1.5e-40  Score=279.25  Aligned_cols=183  Identities=36%  Similarity=0.489  Sum_probs=156.2

Q ss_pred             hhccccCCcceecc--cccCCCCceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHH
Q 028618           12 VTELIGNTPLVYLN--NIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMA   89 (206)
Q Consensus        12 i~~~~~~TPl~~~~--~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~alA~~a   89 (206)
                      |+..+++|||++++  .++...+.+||+|+|++|||||||+|++.+++.+++++|.     ++|+++|+||||.|+|++|
T Consensus         1 i~~~~~~TPl~~~~~~~~~~~~~~~i~~K~E~~~ptgs~K~R~a~~~l~~a~~~~~-----~~vv~assGN~g~a~A~~a   75 (306)
T PF00291_consen    1 ISLGIGPTPLVRLPSRLLSELGGANIYLKREDLNPTGSFKDRGAYYLLSRAKEKGG-----RTVVGASSGNHGRALAYAA   75 (306)
T ss_dssp             GGGGSSSS-EEEEHEHHHHHCTTSEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTT-----SEEEEESSSHHHHHHHHHH
T ss_pred             CcCCCcCCCEEECccccchhccCCeEEEEECCCCCcCCcccccchhhhhhcccccc-----ceeeeeccCCceehhhhhh
Confidence            57889999999965  5556667899999999999999999999999999998865     6789999999999999999


Q ss_pred             HHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHh-------CCCeEEcCCCCCCccHHHHHH
Q 028618           90 AAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAK-------TPNAYMLQQFENPANPKIHYE  162 (206)
Q Consensus        90 ~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~-------~~~~~~~~~~~~~~~~~~g~~  162 (206)
                      +.+|++|++|+|+++++.++++++.+|++|+.++.+  ++++.+.+.+++++       .++.  ++|+ ++.+...||.
T Consensus        76 ~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~g~~  150 (306)
T PF00291_consen   76 ARLGLKCTIVVPEDVSPEKLKQMRALGAEVILVPGD--VEGAFDDAQELAKERAELLSPFNGE--LNQY-NNPNVIAGYA  150 (306)
T ss_dssp             HHHTCEEEEEEETTSHHHHHHHHHHTTCEEEEESST--HHHHHHHHHHHHHHHHHHHHHSTTE--ESTT-TSHHHHHHHH
T ss_pred             hhccccceeeeccccccccccceeeecceEEEcccc--ccccccccccccccccccccccccc--cCcc-cchhhhhhhh
Confidence            999999999999999999999999999999999876  44444444444332       2222  6777 5555588999


Q ss_pred             hHHHHHHhhhCCCCCE--EEEccCcchHHHHHHHHHHh--cCCCCeEC
Q 028618          163 TTGPELWKGSGGRIDA--LVSGIGTGGTITGAGKFLKE--KNPNIKVR  206 (206)
Q Consensus       163 t~~~Ei~~q~~~~~d~--vv~~vG~Gg~~aGi~~~~k~--~~p~~~vi  206 (206)
                      +++.||++|+. .||.  ||+|+|+||+++|++.+++.  . |++|||
T Consensus       151 ~~~~Ei~~q~~-~~d~d~vvv~~GtGg~~~Gi~~~~~~~~~-~~~~vi  196 (306)
T PF00291_consen  151 TIGLEIYEQLG-KPDPDYVVVPVGTGGTAAGIAAGLKELIL-PPVRVI  196 (306)
T ss_dssp             HHHHHHHHHHT-TESESEEEEEESSSHHHHHHHHHHHHHCH-TTSEEE
T ss_pred             hcchhcccccc-cccceEEEecCCchhHHHHHHhhhhhhhc-ccccce
Confidence            99999999997 6665  99999999999999999999  7 899885

Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. Pyridoxal-5'-phosphate-dependent enzymes (B6 enzymes) catalyze manifold reactions in the metabolism of amino acids. Most of these enzymes can be assigned to one of three different families of homologous proteins, the alpha, beta and gamma families. The alpha and gamma family might be distantly related with one another, but are clearly not homologous with the beta family. The beta family includes L- and D-serine dehydratase, threonine dehydratase, the beta subunit of tryptophan synthase, threonine synthase and cysteine synthase. These enzymes catalyze beta-replacement or beta-elimination reactions []. Comparison of sequences from eukaryotic, archebacterial, and eubacterial species indicates that the functional specialization of most B6 enzymes has occurred already in the universal ancestor cell. The cofactor pyridoxal-5-phosphate must have emerged very early in biological evolution; conceivably, organic cofactors and metal ions were the first biological catalysts []. The 3D structure of the beta-subunit of tryptophan synthase has been solved. The subunit has two domains that are approximately the same size and similar to each other in folding pattern. Each has a core containing a four-stranded parallel beta-sheet with three helices on its inner side and one on the outer side. The cofactor is bound at the interface between the domains [].; GO: 0003824 catalytic activity, 0030170 pyridoxal phosphate binding, 0008152 metabolic process; PDB: 1P5J_A 2D1F_B 3AEY_B 3AEX_B 3IAU_A 2Q3B_A 2Q3D_A 2Q3C_A 1TZJ_A 1RQX_D ....

>TIGR00263 trpB tryptophan synthase, beta subunit

Probab=100.00  E-value=2.6e-40  Score=286.25  Aligned_cols=190  Identities=18%  Similarity=0.209  Sum_probs=154.5

Q ss_pred             hhcccc-CCcceecccccCCCC-ceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHH
Q 028618           12 VTELIG-NTPLVYLNNIVNGCV-ARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMA   89 (206)
Q Consensus        12 i~~~~~-~TPl~~~~~l~~~~g-~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~alA~~a   89 (206)
                      +..+++ +|||++++++++.+| .+||+|+|++|||||||+|++..++..+.++|.    +..++++|+||||+|+|++|
T Consensus        43 ~~~~~~~~TPL~~~~~l~~~~g~~~iy~K~E~~nptGS~K~R~a~~~~~~a~~~g~----~~vi~e~ssGN~G~alA~~a  118 (385)
T TIGR00263        43 LRNYAGRPTPLTFAPNLTEALGGAKIYLKREDLNHTGAHKINNALGQALLAKRMGK----KRIIAETGAGQHGVATATAA  118 (385)
T ss_pred             HHHhCCCCCCceehHHHHHHhCCCeEEEEeCCCCCCccchHHHHHHHHHHHHHcCC----CEEEEEcCcHHHHHHHHHHH
Confidence            344554 899999999998887 799999999999999999999999999988885    24556799999999999999


Q ss_pred             HHCCCcEEEEeCCC-CCH--HHHHHHHHcCCEEEEeCCC-CChHHHH-HHHHHHHHhCCCeEEc-CCCCC----CccHHH
Q 028618           90 AAKQYRLIITMPAS-MSL--ERRIILRAFGAELVLTDPA-KGMKGAV-QKAEEILAKTPNAYML-QQFEN----PANPKI  159 (206)
Q Consensus        90 ~~~g~~~~ivvp~~-~~~--~~~~~~~~~Ga~v~~~~~~-~~~~~~~-~~a~~~~~~~~~~~~~-~~~~~----~~~~~~  159 (206)
                      +.+|++|+||||+. .+.  .++++|+.+||+|+.++.. ..++++. +.+++++++.++.+|+ +++.|    +.++..
T Consensus       119 ~~~Gl~~~Iv~p~~~~~~~~~~~~~~~~~GA~Vv~v~~~~~~~~~a~~~~~~~~~~~~~~~~y~~~~~~~~~p~~~~~~~  198 (385)
T TIGR00263       119 ALLGLDCEVYMGAEDVERQKPNVFRMELLGAKVIPVTSGSGTLKDAVNEALRDWVTSVDDTHYVLGSAVGPHPFPTMVRD  198 (385)
T ss_pred             HHcCCCEEEEecCCcccccchHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHHHHhcCCceEEeCCcCCCCCchHHHHH
Confidence            99999999999985 443  5688999999999999853 3355664 4445556664455665 44443    345568


Q ss_pred             HHHhHHHHHHhhhC----CCCCEEEEccCcchHHHHHHHHHHhcCCCCeEC
Q 028618          160 HYETTGPELWKGSG----GRIDALVSGIGTGGTITGAGKFLKEKNPNIKVR  206 (206)
Q Consensus       160 g~~t~~~Ei~~q~~----~~~d~vv~~vG~Gg~~aGi~~~~k~~~p~~~vi  206 (206)
                      ||+|++.||++|+.    ..||+||+|+|+||+++|++.++.. .|++|||
T Consensus       199 ~~~t~g~Ei~~Ql~~~~~~~pD~vv~~vG~Gg~~~Gv~~~~~~-~~~~~ii  248 (385)
T TIGR00263       199 FQSVIGEEAKEQILEQEGRLPDAVIACVGGGSNAIGIFYAFID-DPSVQLI  248 (385)
T ss_pred             HhhHHHHHHHHHHHhhhCCCCCEEEEEeCchHHHHHHHHHHhh-CCCCeEE
Confidence            99999999999973    2589999999999999999998855 6999886

Tryptophan synthase catalyzes the last step in the biosynthesis of tryptophan. the beta chain contains the functional domain for or the synthesis of tryptophan from indole and serine. The enzyme requires pyridoxal-phosphate as a cofactor. The pyridoxal-P attachment site is contained within the conserved region [LIVM]-x-H-x-G-[STA]-H-K-x-N] [K is the pyridoxal-P attachment site] which is present between residues 90-100 of the model.

>PRK13028 tryptophan synthase subunit beta; Provisional

Probab=100.00  E-value=4.2e-40  Score=284.74  Aligned_cols=190  Identities=21%  Similarity=0.169  Sum_probs=157.2

Q ss_pred             hhcccc-CCcceecccccCCC-CceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHH
Q 028618           12 VTELIG-NTPLVYLNNIVNGC-VARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMA   89 (206)
Q Consensus        12 i~~~~~-~TPl~~~~~l~~~~-g~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~alA~~a   89 (206)
                      ..++++ +|||++++++++.+ +.+||+|+|++|||||||+|.+..++..+++.|+    +..|+++|+||||+|+|++|
T Consensus        55 ~~~~~g~pTPL~~~~~Ls~~~Gg~~IylK~EdlnptGS~K~r~al~~~l~A~~~G~----~~vI~etgsGnhG~A~A~aa  130 (402)
T PRK13028         55 LKHYVGRPTPLYHAKRLSEELGGAQIYLKREDLNHTGAHKINNCLGQALLAKRMGK----KRLIAETGAGQHGVATATAA  130 (402)
T ss_pred             HHHhCCCCCCeeehHHhHhhcCCCeEEEEECCCCCCcchHHHHHHHHHHHHHHcCC----CeEEEecCcHHHHHHHHHHH
Confidence            456676 79999999999988 5799999999999999999999999999999886    24566789999999999999


Q ss_pred             HHCCCcEEEEeCCCCCH---HHHHHHHHcCCEEEEeCC-CCChHHHHHHHHH-HHHhCCCeEEcCC-C----CCCccHHH
Q 028618           90 AAKQYRLIITMPASMSL---ERRIILRAFGAELVLTDP-AKGMKGAVQKAEE-ILAKTPNAYMLQQ-F----ENPANPKI  159 (206)
Q Consensus        90 ~~~g~~~~ivvp~~~~~---~~~~~~~~~Ga~v~~~~~-~~~~~~~~~~a~~-~~~~~~~~~~~~~-~----~~~~~~~~  159 (206)
                      +.+|++|+||||+..++   .++.+|+.+||+|+.++. ...++++.+.+.+ ++++.++.+|+.+ .    ..|.++..
T Consensus       131 a~~Gl~~~I~m~~~d~~~q~~nv~~mr~~GAeVi~v~~g~~~~~~a~~~a~~~~~~~~~~~~y~~~s~~gp~p~p~~v~~  210 (402)
T PRK13028        131 ALFGLECEIYMGEVDIERQHPNVFRMKLLGAEVVPVTRGGRTLKEAVDSAFEDYLKDPDNTHYAIGSVVGPHPFPMMVRD  210 (402)
T ss_pred             HHcCCCEEEEECCCcchhhHHHHHHHHHcCCEEEEEcCCCCCHHHHHHHHHHHHHHhcCCcEEEecCcCCCCCcHHHHHH
Confidence            99999999999986443   567899999999999985 2347788887754 5665445666532 1    12344456


Q ss_pred             HHHhHHHHHHhhhC----CCCCEEEEccCcchHHHHHHHHHHhcCCCCeEC
Q 028618          160 HYETTGPELWKGSG----GRIDALVSGIGTGGTITGAGKFLKEKNPNIKVR  206 (206)
Q Consensus       160 g~~t~~~Ei~~q~~----~~~d~vv~~vG~Gg~~aGi~~~~k~~~p~~~vi  206 (206)
                      |+++++.||.+|+.    ..||+||+|+|+||+++|++.+|++ .|++|||
T Consensus       211 ~q~tig~Ei~~Q~~~~~g~~pD~vV~~VGgGg~~~Gi~~~f~~-~~~v~ii  260 (402)
T PRK13028        211 FQSVIGEEAREQFLEMTGRLPDAVVACVGGGSNAIGLFSAFLD-DESVRLV  260 (402)
T ss_pred             HhHHHHHHHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHHHh-CCCceEE
Confidence            99999999999973    3699999999999999999999986 4889886

>PRK04346 tryptophan synthase subunit beta; Validated

Probab=100.00  E-value=3.8e-40  Score=284.60  Aligned_cols=190  Identities=20%  Similarity=0.221  Sum_probs=155.2

Q ss_pred             hhcccc-CCcceecccccCCC-CceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHH
Q 028618           12 VTELIG-NTPLVYLNNIVNGC-VARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMA   89 (206)
Q Consensus        12 i~~~~~-~TPl~~~~~l~~~~-g~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~alA~~a   89 (206)
                      +.++++ +|||+++++|++.+ |.+||+|+|++|||||||+|.+...+..|++.|+    +..|+++|+||||+|+|++|
T Consensus        51 ~~~~~grpTPL~~~~~Ls~~~gg~~IylK~EdlnptGS~K~r~al~~~l~A~~~Gk----~~vIaetgaGnhG~A~A~~a  126 (397)
T PRK04346         51 LKNYVGRPTPLYFAERLSEHLGGAKIYLKREDLNHTGAHKINNVLGQALLAKRMGK----KRIIAETGAGQHGVATATAA  126 (397)
T ss_pred             HHHhcCCCCCceEhHHHHHHcCCCeEEEEECCCCCccchHHHHHHHHHHHHHHcCC----CeEEEecCcHHHHHHHHHHH
Confidence            456676 59999999999988 5899999999999999999999999999999886    24566689999999999999


Q ss_pred             HHCCCcEEEEeCCCC-C--HHHHHHHHHcCCEEEEeCC-CCChHHHHHHHH-HHHHhCCCeEEc-CCCCC----CccHHH
Q 028618           90 AAKQYRLIITMPASM-S--LERRIILRAFGAELVLTDP-AKGMKGAVQKAE-EILAKTPNAYML-QQFEN----PANPKI  159 (206)
Q Consensus        90 ~~~g~~~~ivvp~~~-~--~~~~~~~~~~Ga~v~~~~~-~~~~~~~~~~a~-~~~~~~~~~~~~-~~~~~----~~~~~~  159 (206)
                      +++|++|+||||+.. +  ..++.+|+.+||+|+.++. ...+.++...+. .+.++.++.+|+ ++..+    |.+...
T Consensus       127 a~~Gl~c~I~mp~~d~~rq~~nv~~m~~lGA~Vv~v~~g~~~l~da~~ea~~~~~~~~~~~~y~~gs~~gphp~p~~v~~  206 (397)
T PRK04346        127 ALLGLECVIYMGAEDVERQALNVFRMKLLGAEVVPVTSGSRTLKDAVNEALRDWVTNVEDTHYLIGSVAGPHPYPTMVRD  206 (397)
T ss_pred             HHcCCcEEEEecCCchhhhhhHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHhCCCCeEEeCCcCCCCCchHHHHH
Confidence            999999999999863 3  3567889999999999985 333666655554 466664455554 33222    344456


Q ss_pred             HHHhHHHHHHhhhC----CCCCEEEEccCcchHHHHHHHHHHhcCCCCeEC
Q 028618          160 HYETTGPELWKGSG----GRIDALVSGIGTGGTITGAGKFLKEKNPNIKVR  206 (206)
Q Consensus       160 g~~t~~~Ei~~q~~----~~~d~vv~~vG~Gg~~aGi~~~~k~~~p~~~vi  206 (206)
                      ||++++.||++|+.    ..||+||+|+|+||+++|++.+|++ .|++|||
T Consensus       207 ~q~tig~Ei~eQ~~~~~g~~pD~vVa~VGgGg~~~Gi~~~f~~-~~~v~ii  256 (397)
T PRK04346        207 FQSVIGEEAKAQILEKEGRLPDAVVACVGGGSNAIGIFHPFID-DESVRLI  256 (397)
T ss_pred             hcchHHHHHHHHHHHhhCCCCCEEEEecCccHhHHHHHHHHhh-CCCCeEE
Confidence            99999999999973    3699999999999999999999976 7899986

>PRK13802 bifunctional indole-3-glycerol phosphate synthase/tryptophan synthase subunit beta; Provisional

Probab=100.00  E-value=8.8e-40  Score=297.06  Aligned_cols=190  Identities=19%  Similarity=0.216  Sum_probs=161.2

Q ss_pred             hhcccc-CCcceecccccCC----CC--ceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHH
Q 028618           12 VTELIG-NTPLVYLNNIVNG----CV--ARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIG   84 (206)
Q Consensus        12 i~~~~~-~TPl~~~~~l~~~----~g--~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~a   84 (206)
                      ...++| +|||+++++|++.    +|  .+||+|+|++|||||||+|++.+++..+++.|+.    +.|+++|+||||+|
T Consensus       319 ~~~~iGrpTPL~~~~~Ls~~l~~~~G~g~~IylK~E~lNpTGS~KdR~Al~~i~~A~~~G~~----~~IvetssGNhG~A  394 (695)
T PRK13802        319 NQRYVGRPSPLTEAPRFAERVKEKTGLDARVFLKREDLNHTGAHKINNALGQALLVKRMGKT----RVIAETGAGQHGVA  394 (695)
T ss_pred             HHhcCCCCCceeEchhhhhhhHhhcCCCceEEEEEccCCCcCCcHHHHHHHHHHHHHHcCCC----CEEEEECcHHHHHH
Confidence            456788 9999999998753    44  7999999999999999999999999999999972    57889999999999


Q ss_pred             HHHHHHHCCCcEEEEeCCCC---CHHHHHHHHHcCCEEEEeCC-CCChHHHHHHH-HHHHHhCC-CeEEcCCCCCC----
Q 028618           85 LAFMAAAKQYRLIITMPASM---SLERRIILRAFGAELVLTDP-AKGMKGAVQKA-EEILAKTP-NAYMLQQFENP----  154 (206)
Q Consensus        85 lA~~a~~~g~~~~ivvp~~~---~~~~~~~~~~~Ga~v~~~~~-~~~~~~~~~~a-~~~~~~~~-~~~~~~~~~~~----  154 (206)
                      +|++|+++|++|+||||+..   +..|+.+|+.+||+|+.++. +..+.++.+.+ ++++++.+ .+|+++++.|+    
T Consensus       395 lA~aaA~~Gl~c~Ivmp~~~~~~~~~nv~~mr~lGAeVi~v~~g~~~l~~Ai~ea~~~~~~~~~~~~y~i~~~~g~~P~p  474 (695)
T PRK13802        395 TATVCAMLGLKCRIYMGQIDARRQALNVARMRMLGAEVVEVTLGDRILKDAINEALRDWVTNVKDTHYLLGTVAGPHPFP  474 (695)
T ss_pred             HHHHHHHcCCCEEEEEeCCcccccHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHHHhcCCceEeecccCCCCCcH
Confidence            99999999999999999963   67899999999999999984 32466776555 55776543 44678888664    


Q ss_pred             ccHHHHHHhHHHHHHhhhCC-----CCCEEEEccCcchHHHHHHHHHHhcCCCCeEC
Q 028618          155 ANPKIHYETTGPELWKGSGG-----RIDALVSGIGTGGTITGAGKFLKEKNPNIKVR  206 (206)
Q Consensus       155 ~~~~~g~~t~~~Ei~~q~~~-----~~d~vv~~vG~Gg~~aGi~~~~k~~~p~~~vi  206 (206)
                      .++..||.++|.||++|+..     .||+||+|+|+||+++|++.+|++ .|++|||
T Consensus       475 ~~v~agq~tiG~EI~eQ~~~~~g~~~pD~VVa~VGgGg~~~Gi~~~f~~-~~~vkli  530 (695)
T PRK13802        475 AMVRDFQKIIGEEAKQQLQDWYGIDHPDAICACVGGGSNAIGVMNAFLD-DERVNLY  530 (695)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCCCCEEEEcCCchHHHHHHHHHHHh-CCCceEE
Confidence            34568999999999999952     699999999999999999999976 6888885

>PRK14045 1-aminocyclopropane-1-carboxylate deaminase; Provisional

Probab=100.00  E-value=3.5e-40  Score=280.48  Aligned_cols=195  Identities=22%  Similarity=0.241  Sum_probs=162.3

Q ss_pred             cchhhhhhccccCCcceecccccCCCCceEEEEeCCCCCC--CChhhHHHHHHHHHHHHcCCCCCCCeEEE--eeCCCch
Q 028618            6 SNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPC--SSVKDRIGYSMISDAEAKGLITPGESVLI--EPTSGNT   81 (206)
Q Consensus         6 ~~~~~~i~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~pt--GS~K~R~a~~~~~~a~~~g~~~~~~~~vv--~aSsGN~   81 (206)
                      +..++++....++|||++++++++..|++||+|+|++||+  ||||+|++.+++.++.++|.     ++|+  ++|+|||
T Consensus         9 ~~~~~~~~l~~~~TPl~~~~~l~~~~g~~v~~K~E~l~~~~~gg~K~R~~~~~l~~a~~~G~-----~~vv~~~~ssGN~   83 (329)
T PRK14045          9 LSKFPRVELIPWETPIQYLPNISRELGADVYVKRDDLTGLGIGGNKIRKLEYLLGDALSRGA-----DVVITVGAVHSNH   83 (329)
T ss_pred             hhcCCCcccCCCCCCcccchhhHHHhCCeEEEEcccccCCCCCcchHHHHHhHHHHHHHcCC-----CEEEEeCccHHHH
Confidence            4456788889999999999999887889999999999997  89999999999999999987     4565  6899999


Q ss_pred             HHHHHHHHHHCCCcEEEEeCCCCCHH-HHHHHHHcCCEEEEeCCCCC---hHHHHHHHHHHHHhCCCeEE-cCCCCCCcc
Q 028618           82 GIGLAFMAAAKQYRLIITMPASMSLE-RRIILRAFGAELVLTDPAKG---MKGAVQKAEEILAKTPNAYM-LQQFENPAN  156 (206)
Q Consensus        82 g~alA~~a~~~g~~~~ivvp~~~~~~-~~~~~~~~Ga~v~~~~~~~~---~~~~~~~a~~~~~~~~~~~~-~~~~~~~~~  156 (206)
                      |+|+|++|+.+|++|++|||...+.. +...++.+||+++.++....   .+.+.+.+++++++.+..+| .+++.|+.+
T Consensus        84 g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~~Ga~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~~~n~~~  163 (329)
T PRK14045         84 AFVTGLAAKKLGLDAVLVLRGKEELKGNYLLDKIMGIETRVYEAKDSFELMKYAEEVAEELKGEGRKPYIIPPGGASPVG  163 (329)
T ss_pred             HHHHHHHHHHcCCeEEEEEeCCCCCCcCHHHHHHCCCEEEEECCCcccchHHHHHHHHHHHHhcCCCEEEECCCCCchhH
Confidence            99999999999999999999875443 55677999999998874321   23556666676666545565 566778888


Q ss_pred             HHHHHHhHHHHHHhhhC---CCCCEEEEccCcchHHHHHHHHHHhcCCCCeEC
Q 028618          157 PKIHYETTGPELWKGSG---GRIDALVSGIGTGGTITGAGKFLKEKNPNIKVR  206 (206)
Q Consensus       157 ~~~g~~t~~~Ei~~q~~---~~~d~vv~~vG~Gg~~aGi~~~~k~~~p~~~vi  206 (206)
                      + .|+.+.+.||++|++   ..+|+||+|+|||||++|++.++|+.+|++|||
T Consensus       164 ~-~g~~~~~~EI~~q~~~~~~~~d~vv~~vGtGGt~aGi~~~lk~~~~~~kVi  215 (329)
T PRK14045        164 T-LGYVRAVGEIATQVKKLGVRFDSIVVAVGSGGTLAGLSLGLAILNAEWRVV  215 (329)
T ss_pred             H-HHHHHHHHHHHHHHHhcCCCCCEEEEeCCcHHHHHHHHHHHHHhCCCCeEE
Confidence            5 466555569999996   369999999999999999999999999999996

>TIGR01415 trpB_rel pyridoxal-phosphate dependent TrpB-like enzyme

Probab=100.00  E-value=1.4e-39  Score=283.36  Aligned_cols=185  Identities=21%  Similarity=0.213  Sum_probs=153.2

Q ss_pred             hccc-cCCcceecccccCCCC--ceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEE-eeCCCchHHHHHHH
Q 028618           13 TELI-GNTPLVYLNNIVNGCV--ARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLI-EPTSGNTGIGLAFM   88 (206)
Q Consensus        13 ~~~~-~~TPl~~~~~l~~~~g--~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv-~aSsGN~g~alA~~   88 (206)
                      +..+ ++|||+++++|++.+|  ++||+|+|++|||||||+|++.+++..+.++|.     +.++ ++|+||||+|+|++
T Consensus        62 ~~l~g~pTPL~r~~~L~~~lg~~~~Iy~K~E~~nPtGS~K~R~A~~~~~~a~~~G~-----~~~vtetssGN~G~alA~a  136 (419)
T TIGR01415        62 YAQIGRPTPLIRAKGLEELLGTPARIYYKYESVSPTGSHKINTAIAQAYYAKIEGA-----KRLVTETGAGQWGSALSLA  136 (419)
T ss_pred             HHhcCCCCCeEEccchhhhhCCCceEEEEECCCCCCCCcHHHHHHHHHHHHHHcCC-----CeEEEecCchHHHHHHHHH
Confidence            3445 5899999999998777  699999999999999999999999999999996     3455 46899999999999


Q ss_pred             HHHCCCcEEEEeCCCC---CHHHHHHHHHcCCEEEEeCCCCChHH------------------HHHHHHHHHHhCC-CeE
Q 028618           89 AAAKQYRLIITMPASM---SLERRIILRAFGAELVLTDPAKGMKG------------------AVQKAEEILAKTP-NAY  146 (206)
Q Consensus        89 a~~~g~~~~ivvp~~~---~~~~~~~~~~~Ga~v~~~~~~~~~~~------------------~~~~a~~~~~~~~-~~~  146 (206)
                      |+.+|++|+||||...   ++.|+.+|+.+||+|+.++.+.  ++                  +++.+.+.+++.+ ..|
T Consensus       137 aa~~Gl~~~V~mp~~s~~~k~~k~~~m~~~GA~Vi~~~~~~--~~~~r~~~~~~p~~~gsl~~ai~~a~e~a~~~~~~~y  214 (419)
T TIGR01415       137 GALFGLECKVFMVRVSFNQKPYRKYLMELYGAEVIPSPSEF--TEFGREVLKEDPDHPGSLGIAISEAIEYALSDEDTKY  214 (419)
T ss_pred             HHHcCCcEEEEEeCCCcccCHHHHHHHHHcCCEEEEECCch--hhHHHHhhhcccccccchHHHHHHHHHHHHhCCCCEE
Confidence            9999999999999854   5688999999999999999763  22                  2556667776654 446


Q ss_pred             EcCCCCCCccHHHHHHhHHHHHHhhhCC---CCCEEEEccCcchHHHHHHHHHHhc----CCCCeEC
Q 028618          147 MLQQFENPANPKIHYETTGPELWKGSGG---RIDALVSGIGTGGTITGAGKFLKEK----NPNIKVR  206 (206)
Q Consensus       147 ~~~~~~~~~~~~~g~~t~~~Ei~~q~~~---~~d~vv~~vG~Gg~~aGi~~~~k~~----~p~~~vi  206 (206)
                      +++++.|+  +..|+.++|.||++|++.   .||+||+|+|+||+++|++.+|.+.    .+++|||
T Consensus       215 ~~~~~~n~--~~~h~~~ig~Ei~~Ql~~~g~~pD~vv~~vG~Gg~~~Gi~~~f~~~~l~g~~~~rvi  279 (419)
T TIGR01415       215 SLGSVLNH--VLLHQTVIGLEAKKQMEEAGEDPDVIIGCVGGGSNFAGLAFPFVADKLSGKIDRRFI  279 (419)
T ss_pred             EeCCCCcH--HHHHHHHHHHHHHHHHHhcCCCCCEEEEEeCchHHHHHHHHHHHHHHhcCCCCCEEE
Confidence            66665553  367999999999999964   4999999999999999999888432    3577775

This model represents a family of pyridoxal-phosphate dependent enzyme (pfam00291) closely related to the beta subunit of tryptophan synthase (TIGR00263). However, the only case in which a member of this family replaces a member of TIGR00263 is in Sulfolobus species which contain two sequences which hit this model, one of which is proximal to the alpha subunit. In every other case so far, either the species appears not to make tryptophan (there is no trp synthase alpha subunit), or a trp synthase beta subunit matching TIGR00263 is also found.

>PLN02618 tryptophan synthase, beta chain

Probab=100.00  E-value=1.1e-39  Score=282.24  Aligned_cols=192  Identities=18%  Similarity=0.247  Sum_probs=154.8

Q ss_pred             hhhhcccc-CCcceecccccCCC------CceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchH
Q 028618           10 KDVTELIG-NTPLVYLNNIVNGC------VARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTG   82 (206)
Q Consensus        10 ~~i~~~~~-~TPl~~~~~l~~~~------g~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g   82 (206)
                      ..+.++++ +|||+++++|++.+      |++||+|+|++|||||||+|.+...+..|++.|+    +..|+++|+||||
T Consensus        57 ~~l~~~vGr~TPL~~~~~Ls~~~g~~~~~g~~IylK~E~lnptGS~K~R~a~~~~l~A~~~g~----~~vIaesgaGNhG  132 (410)
T PLN02618         57 GILKDYVGRETPLYFAERLTEHYKRADGEGPEIYLKREDLNHTGAHKINNAVAQALLAKRLGK----KRIIAETGAGQHG  132 (410)
T ss_pred             HHHHHhcCCCCceeEhhhHHHHhccccCCCCEEEEEeCCCCCccchHHHHHHHHHHHHHHcCC----CEEEEEcCcHHHH
Confidence            34677886 89999999999876      5899999999999999999999999998988875    2445566799999


Q ss_pred             HHHHHHHHHCCCcEEEEeCCCC---CHHHHHHHHHcCCEEEEeCC-CCChHHHH-HHHHHHHHhCCCeEEc-CCCC--C-
Q 028618           83 IGLAFMAAAKQYRLIITMPASM---SLERRIILRAFGAELVLTDP-AKGMKGAV-QKAEEILAKTPNAYML-QQFE--N-  153 (206)
Q Consensus        83 ~alA~~a~~~g~~~~ivvp~~~---~~~~~~~~~~~Ga~v~~~~~-~~~~~~~~-~~a~~~~~~~~~~~~~-~~~~--~-  153 (206)
                      +|+|++|+++|++|+||||+..   +..++.+|+.+||+|+.++. +..+.++. +.+++++++..+.+|+ ++..  + 
T Consensus       133 ~AlA~aaa~~Gl~~~I~m~~~~~~~~~~nv~~mr~lGA~Vi~v~~g~~~~~dA~~ea~~~~~~~~~~~~yi~gs~~gp~P  212 (410)
T PLN02618        133 VATATVCARFGLECIVYMGAQDMERQALNVFRMRLLGAEVRPVHSGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHP  212 (410)
T ss_pred             HHHHHHHHHcCCcEEEEEcCCchhhhhhhHHHHHHCCCEEEEEeCCCCCHHHHHHHHHHHHHhccCCCEEEecCcCCCCC
Confidence            9999999999999999999964   35667799999999999954 33477776 4455677764455665 2221  1 


Q ss_pred             -CccHHHHHHhHHHHHHhhh----CCCCCEEEEccCcchHHHHHHHHHHhcCCCCeEC
Q 028618          154 -PANPKIHYETTGPELWKGS----GGRIDALVSGIGTGGTITGAGKFLKEKNPNIKVR  206 (206)
Q Consensus       154 -~~~~~~g~~t~~~Ei~~q~----~~~~d~vv~~vG~Gg~~aGi~~~~k~~~p~~~vi  206 (206)
                       +.....++.+++.||.+|+    +..||+||+|+|+||+++|++.+|+. .|++|||
T Consensus       213 ~~~~v~~~q~tig~Ei~~Q~~~~~g~~pD~VV~~VGgGg~~~Gi~~~f~~-~~~v~li  269 (410)
T PLN02618        213 YPMMVRDFHSVIGKETRRQAMEKWGGKPDVLVACVGGGSNAMGLFHEFID-DEDVRLI  269 (410)
T ss_pred             CHHHHHHhhHHHHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHHh-CCCceEE
Confidence             2233579999999998776    34699999999999999999999975 6899986

>PRK12390 1-aminocyclopropane-1-carboxylate deaminase; Provisional

Probab=100.00  E-value=8.5e-40  Score=278.98  Aligned_cols=195  Identities=17%  Similarity=0.126  Sum_probs=161.0

Q ss_pred             chhhhhhccccCCcceecccccCCCC--ceEEEEeCCCCCC---CChhhHHHHHHHHHHHHcCCCCCCCeEEEee--CCC
Q 028618            7 NIAKDVTELIGNTPLVYLNNIVNGCV--ARIAAKLEMMEPC---SSVKDRIGYSMISDAEAKGLITPGESVLIEP--TSG   79 (206)
Q Consensus         7 ~~~~~i~~~~~~TPl~~~~~l~~~~g--~~i~~K~E~~~pt---GS~K~R~a~~~~~~a~~~g~~~~~~~~vv~a--SsG   79 (206)
                      .-+.++...+++|||++++++++..|  .+||+|+|++||+   ||||+|.+.+++.++.++|.     .+|+++  |+|
T Consensus         4 ~~~~~~~l~~g~TPL~~~~~l~~~~g~~~~v~~K~E~~n~~~~~gs~K~R~~~~~l~~a~~~G~-----~~vvs~G~s~G   78 (337)
T PRK12390          4 QKFPRYPLTFGPTPIHPLKRLSAHLGGKVELYAKREDCNSGLAFGGNKTRKLEYLVPDALAQGA-----DTLVSIGGVQS   78 (337)
T ss_pred             CCCCccccCCCCCcceeHHHHHHHhCCCCeEEEEeCCCCCCCCccchhHHHHHHHHHHHHHcCC-----CEEEEeCCCcc
Confidence            34557888899999999999888777  7999999999987   78899999999999999997     577877  889


Q ss_pred             chHHHHHHHHHHCCCcEEEEeCCCCC--------HHHHHHHHHcCCEEEEeCCCC--ChHHHHHHHHHHHHhCCCeEE-c
Q 028618           80 NTGIGLAFMAAAKQYRLIITMPASMS--------LERRIILRAFGAELVLTDPAK--GMKGAVQKAEEILAKTPNAYM-L  148 (206)
Q Consensus        80 N~g~alA~~a~~~g~~~~ivvp~~~~--------~~~~~~~~~~Ga~v~~~~~~~--~~~~~~~~a~~~~~~~~~~~~-~  148 (206)
                      |||+|+|++|+.+|++|++|+|...+        ..++.+++.+||+|+.++.+.  .+.++.+.+.+.+++.++..| +
T Consensus        79 N~g~alA~aa~~~G~~~~iv~~~~~p~~~~~~~~~~~~~~~~~~GA~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (337)
T PRK12390         79 NHTRQVAAVAAHLGMKCVLVQENWVNYEDAVYDRVGNILLSRIMGADVRLVPDGFDIGIRKSWEDALEDVRAAGGKPYAI  158 (337)
T ss_pred             HHHHHHHHHHHHcCCeEEEEeCCCCCCccchhhccccHHHHHHCCCEEEEeCCCcchhHHHHHHHHHHHHHhCCCceEEe
Confidence            99999999999999999999876544        236778999999999998752  234666677777666444444 5


Q ss_pred             CCCCCC-ccHHHHHHhHHHHHHhh---hCCCCCEEEEccCcchHHHHHHHHHHhcCCCCeEC
Q 028618          149 QQFENP-ANPKIHYETTGPELWKG---SGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKVR  206 (206)
Q Consensus       149 ~~~~~~-~~~~~g~~t~~~Ei~~q---~~~~~d~vv~~vG~Gg~~aGi~~~~k~~~p~~~vi  206 (206)
                      +.+.+. .....||.++++||++|   ++++||+||+|+|||||++|++.+||+..|++|||
T Consensus       159 ~~~~~~~~~~~~G~~~~a~Ei~~q~~~~~~~~d~vvv~vGtGgtlaGi~~~~k~~~~~~rvi  220 (337)
T PRK12390        159 PAGASDHPLGGLGFVGFAEEVRAQEAELGFKFDYIVVCSVTGSTQAGMVVGFAADGRARRVI  220 (337)
T ss_pred             CCcCCCCCcccHHHHHHHHHHHHHHHhcCCCCCEEEEecCcchhHHHHHHHHHhcCCCceEE
Confidence            554333 22256899999999998   44579999999999999999999999999999986

>PRK12391 tryptophan synthase subunit beta; Reviewed

Probab=100.00  E-value=2e-39  Score=282.79  Aligned_cols=189  Identities=20%  Similarity=0.202  Sum_probs=155.5

Q ss_pred             hhccccCCcceecccccCCCC--ceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEe-eCCCchHHHHHHH
Q 028618           12 VTELIGNTPLVYLNNIVNGCV--ARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIE-PTSGNTGIGLAFM   88 (206)
Q Consensus        12 i~~~~~~TPl~~~~~l~~~~g--~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~-aSsGN~g~alA~~   88 (206)
                      ++..+++|||+++++|++.+|  .+||+|+|++||+||||+|++..++..+.++|.     ..+++ +|+||||+|+|++
T Consensus        71 ~~~~~~~TPL~~~~~L~~~lg~~~~Iy~K~E~~nPtGS~K~R~A~~~a~~a~~~G~-----~~~vtetgsGN~G~alA~a  145 (427)
T PRK12391         71 IYRLWRPTPLIRARRLEKALGTPAKIYYKYEGVSPTGSHKPNTAVAQAYYNKKEGI-----KRLTTETGAGQWGSALALA  145 (427)
T ss_pred             HHcccCCCCeeEchhhHhhhCCCceEEEEEcCCCCCCChHHHHHHHHHHHHHHCCC-----CEEEEccCchHHHHHHHHH
Confidence            456778999999999998776  699999999999999999999999999999996     34555 6789999999999


Q ss_pred             HHHCCCcEEEEeCCC---CCHHHHHHHHHcCCEEEEeCCCCC----------------hHHHHHHHHHHHHhCCCeEEcC
Q 028618           89 AAAKQYRLIITMPAS---MSLERRIILRAFGAELVLTDPAKG----------------MKGAVQKAEEILAKTPNAYMLQ  149 (206)
Q Consensus        89 a~~~g~~~~ivvp~~---~~~~~~~~~~~~Ga~v~~~~~~~~----------------~~~~~~~a~~~~~~~~~~~~~~  149 (206)
                      |+.+|++|+||||+.   .++.|+.+|+.+||+|+.++.+..                ...+++.+.+.+++.++.+|+.
T Consensus       146 aa~~Gl~~~V~mp~~s~~~k~~r~~~mr~~GA~Vi~~~~~~~~~~~~~~~~~~~~~gsl~~ai~~A~e~a~~~~~~~y~~  225 (427)
T PRK12391        146 CALFGLECTVFMVRVSYEQKPYRRSLMETYGAEVIPSPSDLTEAGRKILAEDPDHPGSLGIAISEAVEDAAKRPDTKYAL  225 (427)
T ss_pred             HHHcCCcEEEEEecCCcccCHHHHHHHHHCCCEEEEECCchhhhhhhhhhcCccccccHHHHHHHHHHHHHhCCCcEEEc
Confidence            999999999999974   367889999999999999986521                1114666777777655655554


Q ss_pred             CCCCCccHHHHHHhHHHHHHhhhC---CCCCEEEEccCcchHHHHHHHHHHh---cC-CCCeEC
Q 028618          150 QFENPANPKIHYETTGPELWKGSG---GRIDALVSGIGTGGTITGAGKFLKE---KN-PNIKVR  206 (206)
Q Consensus       150 ~~~~~~~~~~g~~t~~~Ei~~q~~---~~~d~vv~~vG~Gg~~aGi~~~~k~---~~-p~~~vi  206 (206)
                      ++.+ .++..||.+++.||++|+.   ..||+||+|+|+||+++|++.+|.+   .+ +++|||
T Consensus       226 ~s~~-~~~~~~~~~ig~Ei~~Ql~~~g~~pD~Vv~~vG~Gg~~aGi~~~f~~~~~~g~~~~rii  288 (427)
T PRK12391        226 GSVL-NHVLLHQTVIGLEAKKQLELAGEYPDVVIGCVGGGSNFAGLAFPFLGDKLEGKKDTRFI  288 (427)
T ss_pred             CCCC-cHHHhhHHHHHHHHHHHHHhcCCCCCEEEEecCchHHHHHHHHHHHHHHhcCCCCceEE
Confidence            4333 3447799999999999985   3699999999999999999987733   34 788875

>cd06449 ACCD Aminocyclopropane-1-carboxylate deaminase (ACCD): Pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of 1-aminocyclopropane-L-carboxylate (ACC), a precursor of the plant hormone ethylene, to alpha-ketobutyrate and ammonia

Probab=100.00  E-value=7.7e-40  Score=276.02  Aligned_cols=182  Identities=23%  Similarity=0.232  Sum_probs=152.2

Q ss_pred             CcceecccccCCC--CceEEEEeCCCCCC---CChhhHHHHHHHHHHHHcCCCCCCCeEEEee--CCCchHHHHHHHHHH
Q 028618           19 TPLVYLNNIVNGC--VARIAAKLEMMEPC---SSVKDRIGYSMISDAEAKGLITPGESVLIEP--TSGNTGIGLAFMAAA   91 (206)
Q Consensus        19 TPl~~~~~l~~~~--g~~i~~K~E~~~pt---GS~K~R~a~~~~~~a~~~g~~~~~~~~vv~a--SsGN~g~alA~~a~~   91 (206)
                      |||++++++++.+  +.+||+|+|++||+   ||+|+|++.+++.++.++|.     +.||++  |+||||.|+|++|+.
T Consensus         1 TPl~~~~~l~~~~g~~~~l~~K~E~~np~gsfgs~K~R~~~~~l~~a~~~g~-----~~vv~~ggs~GN~g~alA~~a~~   75 (307)
T cd06449           1 TPIQYLPRLSEHLGGKVEIYAKRDDCNSGLAFGGNKIRKLEYLLPDALAKGA-----DTLVTVGGIQSNHTRQVAAVAAK   75 (307)
T ss_pred             CcccchhHHHHhhCCCCcEEEecccccCCCCccchHHHHHHHHHHHHHHcCC-----CEEEECCCchhHHHHHHHHHHHH
Confidence            8999999998877  57999999999999   56699999999999999887     578887  689999999999999


Q ss_pred             CCCcEEEEeCCCCC--------HHHHHHHHHcCCEEEEeCCCCC--hHHHHHHH-HHHHHhCCCeEE-cCCC-CCCccHH
Q 028618           92 KQYRLIITMPASMS--------LERRIILRAFGAELVLTDPAKG--MKGAVQKA-EEILAKTPNAYM-LQQF-ENPANPK  158 (206)
Q Consensus        92 ~g~~~~ivvp~~~~--------~~~~~~~~~~Ga~v~~~~~~~~--~~~~~~~a-~~~~~~~~~~~~-~~~~-~~~~~~~  158 (206)
                      +|++|++|||++.+        ..|+++++.+||+|+.++.+..  ...+...+ +++.++.+..++ .+++ +|+.+ .
T Consensus        76 ~G~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  154 (307)
T cd06449          76 LGLKCVLVQENWVPYSDAVYDRVGNILLSRIMGADVRLVSAGFDIGIRKSFEEAAEEVEAKGGKPYVIPAGGSEHPLG-G  154 (307)
T ss_pred             cCCeEEEEecCCCCcccccccccccHHHHHHCCCEEEEECCcchhhHHHHHHHHHHHHHHcCCceEEecCCCCCCccc-H
Confidence            99999999999876        4688999999999999987631  12223333 333333323344 5555 48888 6


Q ss_pred             HHHHhHHHHHHhhhCC---CCCEEEEccCcchHHHHHHHHHHhcCCCCeEC
Q 028618          159 IHYETTGPELWKGSGG---RIDALVSGIGTGGTITGAGKFLKEKNPNIKVR  206 (206)
Q Consensus       159 ~g~~t~~~Ei~~q~~~---~~d~vv~~vG~Gg~~aGi~~~~k~~~p~~~vi  206 (206)
                      .||.+++.||++|++.   .||+||+|+|||||++|++.+||+.+|++|||
T Consensus       155 ~G~~t~~~Ei~~q~~~~~~~~d~vv~~~GtGgt~~G~~~~~~~~~~~~~ii  205 (307)
T cd06449         155 LGYVGFVLEIAQQEEELGFKFDSIVVCSVTGSTHAGLSVGLAALGRQRRVI  205 (307)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCCEEEEeCCchHHHHHHHHHHHhcCCCCeEE
Confidence            7999999999999854   69999999999999999999999999999986

>cd06446 Trp-synth_B Tryptophan synthase-beta: Trptophan synthase is a bifunctional enzyme that catalyses the last two steps in the biosynthesis of L-tryptophan via its alpha and beta reactions

Probab=100.00  E-value=2.6e-39  Score=278.47  Aligned_cols=191  Identities=19%  Similarity=0.160  Sum_probs=151.8

Q ss_pred             hhhccc-cCCcceecccccCCC-CceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHH
Q 028618           11 DVTELI-GNTPLVYLNNIVNGC-VARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFM   88 (206)
Q Consensus        11 ~i~~~~-~~TPl~~~~~l~~~~-g~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~alA~~   88 (206)
                      ...+++ .+|||++++++++.+ +.+||+|+|++||+||||+|++..++..+.++|.    +..++++|+||||+|+|++
T Consensus        26 ~~~~~~~~~TPL~~l~~l~~~~g~~~l~~K~E~~nptgS~K~R~a~~~~~~a~~~g~----~~vv~~~ssGN~g~alA~~  101 (365)
T cd06446          26 LYKDYVGRPTPLYRAKRLSEYLGGAKIYLKREDLNHTGAHKINNALGQALLAKRMGK----KRVIAETGAGQHGVATATA  101 (365)
T ss_pred             HhhccCCCCCCceehHHHHHhhCCceEEEEeccCCCccchhHHHHHHHHHHHHHcCC----CeEEEecCchHHHHHHHHH
Confidence            334444 489999999999877 5799999999999999999999999999999886    1334447999999999999


Q ss_pred             HHHCCCcEEEEeCCCCC---HHHHHHHHHcCCEEEEeCCCC-ChHHHHHHHHHH-HHhCCC-eEEcCCC----CCCccHH
Q 028618           89 AAAKQYRLIITMPASMS---LERRIILRAFGAELVLTDPAK-GMKGAVQKAEEI-LAKTPN-AYMLQQF----ENPANPK  158 (206)
Q Consensus        89 a~~~g~~~~ivvp~~~~---~~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~-~~~~~~-~~~~~~~----~~~~~~~  158 (206)
                      |+.+|++|+||+|+..+   +.++.+++.+||+|+.++... .++++...+.+. +++.++ +|+++++    .++.+++
T Consensus       102 a~~~G~~~~ivvp~~~~~~~~~~~~~~~~~GAeV~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~~~~~~~~~~~~~  181 (365)
T cd06446         102 CALFGLECEIYMGAVDVERQPLNVFRMELLGAEVVPVPSGSGTLKDAISEAIRDWVTNVEDTHYLLGSVVGPHPYPNMVR  181 (365)
T ss_pred             HHHhCCCeEEEEcCCccccccchHHHHHHCCCEEEEeCCCCCcHHHHHHHHHHHHHhccCCceEecccccCCCCchHHHH
Confidence            99999999999998643   367889999999999998642 245665444443 443223 4444332    2234568


Q ss_pred             HHHHhHHHHHHhhhC----CCCCEEEEccCcchHHHHHHHHHHhcCCCCeEC
Q 028618          159 IHYETTGPELWKGSG----GRIDALVSGIGTGGTITGAGKFLKEKNPNIKVR  206 (206)
Q Consensus       159 ~g~~t~~~Ei~~q~~----~~~d~vv~~vG~Gg~~aGi~~~~k~~~p~~~vi  206 (206)
                      +||+|++.||++|+.    ..||+||+|+|+||+++|++.++++ .+++|||
T Consensus       182 ag~~t~~~EI~~Q~~~~~~~~~D~vv~~vG~GGt~~Gi~~g~~~-~~~~~vi  232 (365)
T cd06446         182 DFQSVIGEEAKKQILEKEGELPDVVIACVGGGSNAAGLFYPFIN-DKDVKLI  232 (365)
T ss_pred             HhhhHHHHHHHHHHHHhcCCCCCEEEEecCccHHHHHHHHHHHh-CCCceEE
Confidence            899999999999985    3699999999999999999998877 4688875

In the alpha reaction, indole 3-glycerol phosphate is cleaved reversibly to glyceraldehyde 3-phosphate and indole at the active site of the alpha subunit. In the beta reaction, indole undergoes a PLP-dependent reaction with L-serine to form L-tryptophan at the active site of the beta subunit. Members of this CD, Trp-synth_B, are found in all three major phylogenetic divisions.

>TIGR01274 ACC_deam 1-aminocyclopropane-1-carboxylate deaminase

Probab=100.00  E-value=3.4e-39  Score=275.24  Aligned_cols=193  Identities=18%  Similarity=0.146  Sum_probs=160.5

Q ss_pred             hhhhhhccccCCcceecccccCCCCc--eEEEEeCCCCCC---CChhhHHHHHHHHHHHHcCCCCCCCeEEEee--CCCc
Q 028618            8 IAKDVTELIGNTPLVYLNNIVNGCVA--RIAAKLEMMEPC---SSVKDRIGYSMISDAEAKGLITPGESVLIEP--TSGN   80 (206)
Q Consensus         8 ~~~~i~~~~~~TPl~~~~~l~~~~g~--~i~~K~E~~~pt---GS~K~R~a~~~~~~a~~~g~~~~~~~~vv~a--SsGN   80 (206)
                      -+.++...+++|||++++++++.+|.  +||+|+|++||+   ||||+|.+.+++.+++++|.     .+|+++  |+||
T Consensus         4 ~~~~~~l~~g~TPl~~~~~l~~~~g~~~~l~~K~E~~n~~~~~gs~K~R~~~~~l~~a~~~G~-----~~vvs~ggs~gN   78 (337)
T TIGR01274         4 RFPRYPLTFGPSPIHPLPRLSQHLGGKVTLYAKREDCNSGLAFGGNKTRKLEYLIPDAQAQGC-----TTLVSIGGIQSN   78 (337)
T ss_pred             cCCccccCCCCCCceEhHhhHHhcCCCceEEEEccCCcCCcCccchHHHHHHHHHHHHHHcCC-----CEEEECCCCcch
Confidence            35677888999999999999988774  999999999986   77899999999999999997     567876  7799


Q ss_pred             hHHHHHHHHHHCCCcEEEEeCCCCC--------HHHHHHHHHcCCEEEEeCCCCC--hHHHHHHHHHHHHhC-CCeEEcC
Q 028618           81 TGIGLAFMAAAKQYRLIITMPASMS--------LERRIILRAFGAELVLTDPAKG--MKGAVQKAEEILAKT-PNAYMLQ  149 (206)
Q Consensus        81 ~g~alA~~a~~~g~~~~ivvp~~~~--------~~~~~~~~~~Ga~v~~~~~~~~--~~~~~~~a~~~~~~~-~~~~~~~  149 (206)
                      ||+|+|++|+.+|++|++|||+..+        ..|+.+++.+||+|+.++.+..  ..++...+.+.+++. +..++++
T Consensus        79 ~g~alA~~a~~~Gl~~~iv~~~~~~~~~~~~~~~~~~~~~~~~GA~v~~v~~~~~~~~~~~~~~a~~~~~~~~~~~~~i~  158 (337)
T TIGR01274        79 QTRQVAAVAAHLGMKCVLVQENWVNYSDAVYDRVGNIQLSRIMGADVRLDPDGFDIGHRNSWERALEEVRGAGGKPYPIP  158 (337)
T ss_pred             HHHHHHHHHHHcCCcEEEEeccCCCccccchhccchHHHHHHcCCEEEEeCCcccccchHHHHHHHHHHHhcCCceEEeC
Confidence            9999999999999999999998542        5889999999999999987521  235555566555554 3336666


Q ss_pred             CCCC--CccHHHHHHhHHHHHHhhh---CCCCCEEEEccCcchHHHHHHHHHHhcCCCCeEC
Q 028618          150 QFEN--PANPKIHYETTGPELWKGS---GGRIDALVSGIGTGGTITGAGKFLKEKNPNIKVR  206 (206)
Q Consensus       150 ~~~~--~~~~~~g~~t~~~Ei~~q~---~~~~d~vv~~vG~Gg~~aGi~~~~k~~~p~~~vi  206 (206)
                      .+.+  +.. ..|+.+++.||++|+   +..||+||+|+|||||++|++.++++..|++|||
T Consensus       159 ~~~~~~~~~-~~G~~~~~~Ei~eq~~~~~~~~D~vvv~vGtGgt~aGl~~~~~~~~~~~~vi  219 (337)
T TIGR01274       159 AGCSDHPLG-GLGFVGFAFEVREQEGELGFKFDYVVVCSVTGSTQAGMVAGFAADGRKDRVI  219 (337)
T ss_pred             CCCCCCccc-hhHHHHHHHHHHHHHHhcCCCCCEEEEeCCchHhHHHHHHHHHHhCCCCeEE
Confidence            5533  444 468899999999995   3479999999999999999999999999999986

This pyridoxal phosphate-dependent enzyme degrades 1-aminocyclopropane-1-carboxylate, which in plants is a precursor of the ripening hormone ethylene, to ammonia and alpha-ketoglutarate. This model includes all members of this family for which function has been demonstrated experimentally, but excludes a closely related family often annotated as putative members of this family.

>TIGR03844 cysteate_syn cysteate synthase

Probab=100.00  E-value=3.2e-39  Score=279.89  Aligned_cols=175  Identities=17%  Similarity=0.089  Sum_probs=153.1

Q ss_pred             cccCCcceecccccCCCCc-eEEEEeC-------CCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHH
Q 028618           15 LIGNTPLVYLNNIVNGCVA-RIAAKLE-------MMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLA   86 (206)
Q Consensus        15 ~~~~TPl~~~~~l~~~~g~-~i~~K~E-------~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~alA   86 (206)
                      ..+.|||+++++|++.+|. ++|+|+|       ++|||||||||++.+++..+.++|.     +.||++|+||||+|+|
T Consensus        59 ~~g~tpl~~~~~L~~~lG~~~v~~K~e~~~~K~E~~npTGSFKdRga~~~i~~a~~~g~-----~~Vv~aSsGN~g~alA  133 (398)
T TIGR03844        59 TRGGPVTYKSEGLARELGLSDLYITFSGYWPERGAFMRTCSFKELEALPTMQRLKERGG-----KTLVVASAGNTGRAFA  133 (398)
T ss_pred             CCCCCceeehHHHHHHhCCCeEEEEecCcccchhccCCccccHHHHHHHHHHHHHHcCC-----CEEEEECCCHHHHHHH
Confidence            4567999999999999998 9999555       4899999999999999999999884     6899999999999999


Q ss_pred             HHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHHH
Q 028618           87 FMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGP  166 (206)
Q Consensus        87 ~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~  166 (206)
                      ++|+++|++|+||||++++..+...++.+|++|+.++++  ++++.+.++++++++ +++..++++||.. ++|++|+++
T Consensus       134 ~~aa~~Gi~~~I~vP~~~~~~~~~~~~~~ga~vv~v~g~--~d~a~~~a~~~a~~~-g~~~~~~~~~p~~-ieG~~Ti~~  209 (398)
T TIGR03844       134 EVSAITGQPVILVVPKSSADRLWTTEPASSVLLVTVDGD--YTDAIALADRIATLP-GFVPEGGARNVAR-RDGMGTVML  209 (398)
T ss_pred             HHHHHcCCcEEEEECCChHHHHHHHhhCCcEEEEECCCC--HHHHHHHHHHHHHhC-CccccCCCCCHHH-HhhHHHHHH
Confidence            999999999999999986544444457899999999987  889999999998875 6655566678886 789999999


Q ss_pred             HHHhhhCCCCCEEEEccCcchHHHHHHHHHHh
Q 028618          167 ELWKGSGGRIDALVSGIGTGGTITGAGKFLKE  198 (206)
Q Consensus       167 Ei~~q~~~~~d~vv~~vG~Gg~~aGi~~~~k~  198 (206)
                      ||++|++..||+||+|+|+|+++.|++.++++
T Consensus       210 Ei~eql~~~PD~VvvPvG~G~~~~~~~~~~~~  241 (398)
T TIGR03844       210 DAAVTIGSLPDHYFQAVGSGTGGIAAWEAAMR  241 (398)
T ss_pred             HHHHHcCCCCCEEEEecCCCHHHHHHHHHHHH
Confidence            99999974599999999999889999998887

Members of this family are cysteate synthase, an enzyme of alternate pathway to sulfopyruvate, a precursor of coenzyme M.

>PRK13803 bifunctional phosphoribosylanthranilate isomerase/tryptophan synthase subunit beta; Provisional

Probab=100.00  E-value=1.1e-37  Score=282.83  Aligned_cols=190  Identities=21%  Similarity=0.218  Sum_probs=154.9

Q ss_pred             hhcccc-CCcceecccccCCCCceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHHH
Q 028618           12 VTELIG-NTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAA   90 (206)
Q Consensus        12 i~~~~~-~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~alA~~a~   90 (206)
                      ...+++ +|||+++++|++.+|.+||+|+|++|||||||+|.+...+..+++.|+    +..++++|+||||+|+|++|+
T Consensus       264 ~~~~~grpTPL~~~~~Ls~~~G~~IylK~E~lnptGS~K~r~al~~~~~a~~~g~----~~vi~e~gsGnhG~A~A~~aa  339 (610)
T PRK13803        264 LQNYAGRPTPLTEAKRLSDIYGARIYLKREDLNHTGSHKINNALGQALLAKRMGK----TRIIAETGAGQHGVATATACA  339 (610)
T ss_pred             HHHhCCCCCcceeHHHHHHhhCCEEEEEeCCCCCcccHHHHHHHHHHHHHHHcCC----CEEEEecChHHHHHHHHHHHH
Confidence            345565 799999999998889999999999999999999999999999988885    245667899999999999999


Q ss_pred             HCCCcEEEEeCCCC---CHHHHHHHHHcCCEEEEeCCC-CChHHHHHHH-HHHHHhCCCeEEcCCCC---C--CccHHHH
Q 028618           91 AKQYRLIITMPASM---SLERRIILRAFGAELVLTDPA-KGMKGAVQKA-EEILAKTPNAYMLQQFE---N--PANPKIH  160 (206)
Q Consensus        91 ~~g~~~~ivvp~~~---~~~~~~~~~~~Ga~v~~~~~~-~~~~~~~~~a-~~~~~~~~~~~~~~~~~---~--~~~~~~g  160 (206)
                      ++|++|+||||+..   ...++.+|+.+||+|+.++.. ..+.++...+ +++..+.++.+|+.++.   +  |.++..|
T Consensus       340 ~~Gl~~~I~m~~~~~~~~~~nv~~m~~~GA~Vi~v~~~~~~~~~a~~~a~~~~~~~~~~~~y~~~~~~g~~p~p~~v~~~  419 (610)
T PRK13803        340 LFGLKCTIFMGEEDIKRQALNVERMKLLGANVIPVLSGSKTLKDAVNEAIRDWVASVPDTHYLIGSAVGPHPYPEMVAYF  419 (610)
T ss_pred             HcCCcEEEEEeCCcccchhhHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHhCCCcEEEeCCcCCCCCcHHHHHHH
Confidence            99999999999874   356788999999999999853 2355665444 44545555677764432   2  3343458


Q ss_pred             HHhHHHHHHhhhC----CCCCEEEEccCcchHHHHHHHHHHhcCCCCeEC
Q 028618          161 YETTGPELWKGSG----GRIDALVSGIGTGGTITGAGKFLKEKNPNIKVR  206 (206)
Q Consensus       161 ~~t~~~Ei~~q~~----~~~d~vv~~vG~Gg~~aGi~~~~k~~~p~~~vi  206 (206)
                      ++|++.||++|+.    ..||+||+|+|+||+++|++.+|++ .|+++||
T Consensus       420 ~~tig~Ei~~Q~~~~~g~~pD~vV~~vGgGg~~~Gi~~~f~~-~~~v~ii  468 (610)
T PRK13803        420 QSVIGEEAKEQLKEQTGKLPDAIIACVGGGSNAIGIFYHFLD-DPSVKLI  468 (610)
T ss_pred             hhHHHHHHHHHHHHhhCCCCCEEEEEeCcCHhHHHHHHHHhh-CCCceEE
Confidence            9999999999984    2599999999999999999999965 7888885

>COG0498 ThrC Threonine synthase [Amino acid transport and metabolism]

Probab=100.00  E-value=2.1e-33  Score=242.24  Aligned_cols=184  Identities=24%  Similarity=0.212  Sum_probs=166.9

Q ss_pred             hhccccCCcceecccccCCCCc---eEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHH
Q 028618           12 VTELIGNTPLVYLNNIVNGCVA---RIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFM   88 (206)
Q Consensus        12 i~~~~~~TPl~~~~~l~~~~g~---~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~alA~~   88 (206)
                      .....+.||+++.+++...++.   ++|+|.|.+|||||||||++..++..+.+.|.     .+|+++||||+|.|+|.+
T Consensus        70 ~~l~eg~tp~~~~~~~~~~l~~~~~~lyvk~~~~nPT~SFKDrg~~~~~~~~~~~g~-----~~I~~ASSGnTgAs~aay  144 (411)
T COG0498          70 VSLGEGGTPLYKAPALAAPLGVLNDNLYVKELGHNPTGSFKDRGMTVLVSLAKELGA-----KTILCASSGNTGASAAAY  144 (411)
T ss_pred             hhhhhccCccccCcccchhhccCCcceehhhhccCCCcchhhhhHHHHHHHHHHhcC-----CEEEEeCCchHHHHHHHH
Confidence            4556678999999888887774   59999999999999999999999999999884     379999999999999999


Q ss_pred             HHHCCCcEEEEeCCC-CCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHHHH
Q 028618           89 AAAKQYRLIITMPAS-MSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPE  167 (206)
Q Consensus        89 a~~~g~~~~ivvp~~-~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~E  167 (206)
                      +.+.|++|.|++|.+ .+..|+.+|..+|++++.++++  +++|.+.+++.+++. ++++....-||.. ++|+.|+++|
T Consensus       145 a~rag~~v~Vl~P~g~vs~~k~~q~~~~ga~~i~v~G~--fDda~~~vk~~~~~~-~~~~~~nsiNp~r-legq~t~~fe  220 (411)
T COG0498         145 AARAGLKVFVLYPKGKVSPGKLAQMLTLGAHVIAVDGN--FDDAQELVKEAANRE-GLLSAVNSINPYR-LEGQKTYAFE  220 (411)
T ss_pred             hccCCCeEEEEecCCCCCHHHHHHHHhcCCEEEEEcCc--HHHHHHHHHHHHhhC-CceeeccccCHHH-hhhhhhhHhH
Confidence            999999999999998 9999999999999999999999  889999999999966 5677777778887 7899999999


Q ss_pred             HHhhhCC-CCCEEEEccCcchHHHHHHHHHHhcCCCCe
Q 028618          168 LWKGSGG-RIDALVSGIGTGGTITGAGKFLKEKNPNIK  204 (206)
Q Consensus       168 i~~q~~~-~~d~vv~~vG~Gg~~aGi~~~~k~~~p~~~  204 (206)
                      |++|+++ .||+|++|+|+||++.|++.+|++..|.-+
T Consensus       221 ~~~ql~~~~p~~v~vPvGn~gni~a~~~g~~~~~~~g~  258 (411)
T COG0498         221 IAEQLGWKAPDHVVVPVGNGGNLLAIYKGFKEGLPIGK  258 (411)
T ss_pred             HHHHhCCCCCCeEEEeCCchHHHHHHHHHHHhcccccc
Confidence            9999974 799999999999999999999999877543

>COG2515 Acd 1-aminocyclopropane-1-carboxylate deaminase [Amino acid transport and metabolism]

Probab=99.95  E-value=2.3e-27  Score=193.91  Aligned_cols=195  Identities=18%  Similarity=0.177  Sum_probs=158.5

Q ss_pred             cchhhhhhccccCCcceecccccCCCCceEEEEeCCCCCC--CChhhHHHHHHHHHHHHcCCCCCCCeEEEeeC--CCch
Q 028618            6 SNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPC--SSVKDRIGYSMISDAEAKGLITPGESVLIEPT--SGNT   81 (206)
Q Consensus         6 ~~~~~~i~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~pt--GS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aS--sGN~   81 (206)
                      +..++++.....+||+..++++++..|++||+|+|+..+-  |.+|.|...+++.+|.++|.     +++|+..  .+||
T Consensus         3 l~rf~R~~l~~~pTPiq~L~rls~~lg~eiYiKRDD~t~l~~gGNK~RKLefll~eal~~g~-----dTlvT~GgiQSNh   77 (323)
T COG2515           3 LSRFPRMELIFGPTPIQKLPRLSAHLGVEIYIKRDDLTGLAFGGNKIRKLEFLLGEALRKGA-----DTLVTYGGIQSNH   77 (323)
T ss_pred             cccCCccccCCCCChhhhHHHHHHhcCeEEEEEcccccccccCccHHHHHHHHHhhhhhcCC-----cEEEEecccchhH
Confidence            4457788888899999999999999999999999999653  89999999999999999997     6788874  4999


Q ss_pred             HHHHHHHHHHCCCcEEEEeCCCC----CHHHHHHHHHcCCEEEEeCCCCCh--HHHHHHHHHHHHhCCCeEEc-CCCC-C
Q 028618           82 GIGLAFMAAAKQYRLIITMPASM----SLERRIILRAFGAELVLTDPAKGM--KGAVQKAEEILAKTPNAYML-QQFE-N  153 (206)
Q Consensus        82 g~alA~~a~~~g~~~~ivvp~~~----~~~~~~~~~~~Ga~v~~~~~~~~~--~~~~~~a~~~~~~~~~~~~~-~~~~-~  153 (206)
                      .+++|++|+++|++|+.++....    ...++...+.+|+++..++...++  +...+...+..++.++..|+ +... |
T Consensus        78 ~r~tAavA~~lGl~~v~ile~~~~~y~~ngn~Ll~~l~G~~~~~~~~~~d~~~~~~~~~~~e~~~~~g~kpyvIp~GG~~  157 (323)
T COG2515          78 VRQTAAVAAKLGLKCVLILENIEANYLLNGNLLLSKLMGAEVRAVDAGTDIGINASAEELAEEVRKQGGKPYVIPEGGSS  157 (323)
T ss_pred             HHHHHHHHHhcCCcEEEEEeccccccccccchhhhhhcCceEEEecCCCChhhchhhHHHHHHHHhcCCCCcEeccCCcC
Confidence            99999999999999999997654    223566678899999999977544  33334444444444454443 3333 4


Q ss_pred             CccHHHHHHhHHHHHHhhhC--CCCCEEEEccCcchHHHHHHHHHHhcCCCCeEC
Q 028618          154 PANPKIHYETTGPELWKGSG--GRIDALVSGIGTGGTITGAGKFLKEKNPNIKVR  206 (206)
Q Consensus       154 ~~~~~~g~~t~~~Ei~~q~~--~~~d~vv~~vG~Gg~~aGi~~~~k~~~p~~~vi  206 (206)
                      |.- ..||...+.||.+|..  -++|+||+++|||||.||++.++...+|+++||
T Consensus       158 ~~g-~lGyv~~a~Ei~~Q~~~~~~fD~vVva~gs~gT~AGl~~g~~~~~~~~~Vi  211 (323)
T COG2515         158 PLG-ALGYVRLALEIAEQAEQLLKFDSVVVAPGSGGTHAGLLVGLAQLGPDVEVI  211 (323)
T ss_pred             ccc-cccHHHHHHHHHHHHhhccCCCEEEEeCCCcchHHHHHHHhhhccCCCceE
Confidence            433 4699999999999986  479999999999999999999999999999986

>COG0133 TrpB Tryptophan synthase beta chain [Amino acid transport and metabolism]

Probab=99.94  E-value=4.7e-26  Score=186.94  Aligned_cols=190  Identities=21%  Similarity=0.240  Sum_probs=153.2

Q ss_pred             hhcccc-CCcceecccccCCCCceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHHH
Q 028618           12 VTELIG-NTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAA   90 (206)
Q Consensus        12 i~~~~~-~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~alA~~a~   90 (206)
                      +..+.| +|||+..++|++.+|.+||+|+|++|+||++|..-+...+..|++.|+    ++.|.+...|.||.|.|.+|+
T Consensus        49 l~~Y~GRptpLy~a~~Lt~~~gakiyLKREDL~HtGAHKiNN~lGQ~LLAkrMGK----~riIAETGAGQHGVAtAta~A  124 (396)
T COG0133          49 LKDYAGRPTPLYFAERLTEHLGAKIYLKREDLNHTGAHKINNALGQALLAKRMGK----TRIIAETGAGQHGVATATAAA  124 (396)
T ss_pred             HHHhCCCCChhHHHHHHHHhhCceEEEehhhhcccchhhHHHHHHHHHHHHHhCC----ceEEeecCCCcccHHHHHHHH
Confidence            444554 699999999999999999999999999999999999999999999998    467788888999999999999


Q ss_pred             HCCCcEEEEeCCC-C--CHHHHHHHHHcCCEEEEeCC-CCChHHHHHHH-HHHHHhCCCeEEcC-----CCCCCccHHHH
Q 028618           91 AKQYRLIITMPAS-M--SLERRIILRAFGAELVLTDP-AKGMKGAVQKA-EEILAKTPNAYMLQ-----QFENPANPKIH  160 (206)
Q Consensus        91 ~~g~~~~ivvp~~-~--~~~~~~~~~~~Ga~v~~~~~-~~~~~~~~~~a-~~~~~~~~~~~~~~-----~~~~~~~~~~g  160 (206)
                      ++|++|+|||-.. .  ...+.-+|+.+||+|+.|.. +....++...| +.|.....+.+|+-     |.--|.....-
T Consensus       125 ~fgl~C~iYMGa~Dv~RQ~~NVfRM~LlGA~V~pV~sGs~TLKDA~neAlRdWvtn~~~ThY~iGsa~GPHPyP~iVRdF  204 (396)
T COG0133         125 LFGLECVIYMGAEDVERQALNVFRMRLLGAEVVPVTSGSGTLKDAINEALRDWVTNVEDTHYLIGSAAGPHPYPTIVRDF  204 (396)
T ss_pred             HhCCceEEEecchhhhhcccchhhhhhcCceEEEeccCCchHHHHHHHHHHHHHhccccceEEEeeccCCCCchHHHHHH
Confidence            9999999999653 3  23456688999999999964 33455665554 57888777788842     22223443456


Q ss_pred             HHhHHHHHHhhh----CCCCCEEEEccCcchHHHHHHHHHHhcCCCCeEC
Q 028618          161 YETTGPELWKGS----GGRIDALVSGIGTGGTITGAGKFLKEKNPNIKVR  206 (206)
Q Consensus       161 ~~t~~~Ei~~q~----~~~~d~vv~~vG~Gg~~aGi~~~~k~~~p~~~vi  206 (206)
                      ++.++.|..+|+    +.-||+||.|+|+|++..|+...|... +++++|
T Consensus       205 Q~vIG~E~k~Qile~egrlPD~vvACVGGGSNAiG~F~~Fi~d-~~V~Li  253 (396)
T COG0133         205 QSVIGEEAKAQILEKEGRLPDAVVACVGGGSNAIGIFHPFIDD-ESVRLI  253 (396)
T ss_pred             HHHHhHHHHHHHHHHhCCCCCeEEEeccCCcchhhhcccccCC-CCceEE
Confidence            888999987775    445999999999999999999888653 667764

>cd01560 Thr-synth_2 Threonine synthase catalyzes the final step of threonine biosynthesis

Probab=99.91  E-value=3.5e-23  Score=182.19  Aligned_cols=169  Identities=14%  Similarity=0.068  Sum_probs=137.7

Q ss_pred             CcceecccccCCCCceEEEEeCCCCCCCChhhHHHHHH---HHHHHHcCCCCCCCeEEEeeCCCchHHH-HHHHHHHCCC
Q 028618           19 TPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSM---ISDAEAKGLITPGESVLIEPTSGNTGIG-LAFMAAAKQY   94 (206)
Q Consensus        19 TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~---~~~a~~~g~~~~~~~~vv~aSsGN~g~a-lA~~a~~~g~   94 (206)
                      +||.++.       .++|++...++||||||||++..+   +..+.++..   +...|+++||||+|.| ++.++.+.|+
T Consensus        88 ~pl~~l~-------~~~~~lELfhGPT~sFKD~a~~~l~~l~~~~~~~~~---~~~~Il~ATSGdTG~Aa~aaf~~~~gi  157 (460)
T cd01560          88 APLVQLG-------DNLYVLELFHGPTLAFKDMALQFLGRLLEYFLKRRN---ERITILVATSGDTGSAAIEGFRGKPNV  157 (460)
T ss_pred             cceEEeC-------CCcEEeeeeeCCCcchHHhHHHHHHHHHHHHHHhcC---CCeEEEEcCCCcHHHHHHHHHhCcCCC
Confidence            6776654       267999999999999999999876   566655411   2368999999999999 4888899999


Q ss_pred             cEEEEeCCC-CCHHHHHHHHHcCC---EEEEeCCCCChHHHHHHHHHHHHhC-----CCeEEcCCCCCCccHHHHHHhHH
Q 028618           95 RLIITMPAS-MSLERRIILRAFGA---ELVLTDPAKGMKGAVQKAEEILAKT-----PNAYMLQQFENPANPKIHYETTG  165 (206)
Q Consensus        95 ~~~ivvp~~-~~~~~~~~~~~~Ga---~v~~~~~~~~~~~~~~~a~~~~~~~-----~~~~~~~~~~~~~~~~~g~~t~~  165 (206)
                      +|+|++|.+ +++.++.+|..+|+   +++.++++  +++|...++++.++.     .+++-.|. -|+.. +.++.+.+
T Consensus       158 ~v~Vl~P~g~vs~~Q~~Qm~t~g~~Nv~vi~V~G~--fDd~q~~vk~~~~d~~~~~~~~l~saNS-iN~~R-i~~Q~~yy  233 (460)
T cd01560         158 DVVVLYPKGGVSPIQELQMTTLPADNVHVVAVEGD--FDDCQSLVKALFADEDFNKKLKLSSANS-INWAR-ILAQIVYY  233 (460)
T ss_pred             EEEEEEcCCCCCHHHHHHHHhhCCCceEEEEEcCC--HHHHHHHHHHHhcChhhHhcceEEEEec-cCHHH-HHHHHHHH
Confidence            999999996 99999999999996   88888887  889999988876652     13444444 46666 67999999


Q ss_pred             HHHHhhhCC----CCCEEEEccCcchHHHHHHHHHHhcCC
Q 028618          166 PELWKGSGG----RIDALVSGIGTGGTITGAGKFLKEKNP  201 (206)
Q Consensus       166 ~Ei~~q~~~----~~d~vv~~vG~Gg~~aGi~~~~k~~~p  201 (206)
                      .|+++|+.+    .||.|+||+|+||.+.|.+.+.+.-.|
T Consensus       234 f~a~~ql~~~~~~~p~~~vVPtGnfgni~a~~~Ak~mGlp  273 (460)
T cd01560         234 FYAYLQLLKRGEGEKVEFSVPTGNFGNILAGYYAKKMGLP  273 (460)
T ss_pred             HHHHHHhccccCCCCCEEEEECCcHHHHHHHHHHHHcCCC
Confidence            999999964    589999999999999999998664334

The conversion of O-phosphohomoserine into threonine and inorganic phosphate is pyridoxal 5'-phosphate dependent. The Thr-synth_1 CD includes members from higher plants, cyanobacteria, archaebacteria and eubacterial groups. This CD, Thr-synth_2, includes enzymes from fungi and eubacterial groups, as well as, metazoan threonine synthase-like proteins.

>PRK09225 threonine synthase; Validated

Probab=99.91  E-value=2.6e-23  Score=183.04  Aligned_cols=165  Identities=15%  Similarity=0.093  Sum_probs=135.6

Q ss_pred             CCcceecccccCCCCceEEEEeCCCCCCCChhhHHHHH---HHHHHHHcCCCCCCCeEEEeeCCCchHHHH-HHHHHHCC
Q 028618           18 NTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYS---MISDAEAKGLITPGESVLIEPTSGNTGIGL-AFMAAAKQ   93 (206)
Q Consensus        18 ~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~---~~~~a~~~g~~~~~~~~vv~aSsGN~g~al-A~~a~~~g   93 (206)
                      .+||.++.       .++|+.--.++||||||||++..   ++..+.+ +.    ...|+++||||+|.|+ |.++.+.|
T Consensus        88 ~~pl~~l~-------~~~~~lELfhGPT~sFKD~a~~~l~~~l~~a~~-~~----~~~Il~ATSGdtG~Aa~aaf~~~~g  155 (462)
T PRK09225         88 IAPLVQLD-------DNLYVLELFHGPTLAFKDFALQFLAQLLEYVLK-GE----KITILGATSGDTGSAAAEAFRGKPN  155 (462)
T ss_pred             ccceEEeC-------CCceeHhhccCCccchhhhHHHHHHHHHHHHHh-CC----CcEEEEcCCCcHHHHHHHHHhCcCC
Confidence            37777653       25788777789999999999988   7777776 42    2689999999999998 78888999


Q ss_pred             CcEEEEeCCC-CCHHHHHHHHHc-CCEE--EEeCCCCChHHHHHHHHHHHHhC-----CCeEEcCCCCCCccHHHHHHhH
Q 028618           94 YRLIITMPAS-MSLERRIILRAF-GAEL--VLTDPAKGMKGAVQKAEEILAKT-----PNAYMLQQFENPANPKIHYETT  164 (206)
Q Consensus        94 ~~~~ivvp~~-~~~~~~~~~~~~-Ga~v--~~~~~~~~~~~~~~~a~~~~~~~-----~~~~~~~~~~~~~~~~~g~~t~  164 (206)
                      ++|+|++|++ +++.++.+|..+ |++|  +.++++  +++|...++++.++.     .+++-.|. -|+.. +.|+.++
T Consensus       156 i~~~V~~P~g~vs~~q~~Qm~t~~g~nv~vi~V~G~--fDD~q~~vk~~~~d~~~~~~~~l~saNS-iN~~R-i~gQ~~y  231 (462)
T PRK09225        156 VRVVILYPKGKVSPVQEKQMTTLQGDNIHVVAVEGN--FDDCQALVKAAFNDEELKEKLKLSSANS-INIGR-LLAQIVY  231 (462)
T ss_pred             CEEEEEEcCCCCCHHHHHHHHhhcCCCeEEEEeCCC--HHHHHHHHHHHhhchhhhhcCceEEEec-cCHHH-HHHHHHH
Confidence            9999999996 999999999999 9977  666766  889999988876651     14555555 37776 6799999


Q ss_pred             HHHHHhhhCC---CCCEEEEccCcchHHHHHHHHHHh
Q 028618          165 GPELWKGSGG---RIDALVSGIGTGGTITGAGKFLKE  198 (206)
Q Consensus       165 ~~Ei~~q~~~---~~d~vv~~vG~Gg~~aGi~~~~k~  198 (206)
                      +.|+++|+.+   .||.|++|+|+||.+.|.+.+.+.
T Consensus       232 yfea~~ql~~~~~~p~~~vVPtGnfgni~a~~~Ak~m  268 (462)
T PRK09225        232 YFYAYLQLGIEAGEKVNFSVPSGNFGNILAGYYAKKM  268 (462)
T ss_pred             HHHHHHHhccccCCCCEEEEECCcHHHHHHHHHHHHc
Confidence            9999999964   389999999999999999998443

>COG1350 Predicted alternative tryptophan synthase beta-subunit (paralog of TrpB) [General function prediction only]

Probab=99.91  E-value=7.3e-24  Score=174.56  Aligned_cols=181  Identities=23%  Similarity=0.202  Sum_probs=144.1

Q ss_pred             hhccc-cCCcceecccccCCCC--ceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHH
Q 028618           12 VTELI-GNTPLVYLNNIVNGCV--ARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFM   88 (206)
Q Consensus        12 i~~~~-~~TPl~~~~~l~~~~g--~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~alA~~   88 (206)
                      ++..+ .+|||+++++|.+.++  ++||+|.|+..|+||+|...|......++.+|.    ++.+.+...|..|.|++++
T Consensus        71 ~Y~~~gRPTPL~RA~~LE~~L~tparIYyK~Eg~tptGSHKiNTAlAqaYyak~eg~----~rl~TETGAGQWGsAlslA  146 (432)
T COG1350          71 AYLQIGRPTPLIRAKNLEEALGTPARIYYKYEGVTPTGSHKINTALAQAYYAKKEGA----KRLTTETGAGQWGSALSLA  146 (432)
T ss_pred             HHHHhCCCCchhhhhhHHHHhCCCcEEEEEecccCCCCCCCcchHHHHHHHHHhcCc----eeeecccCCchHHHHHHHH
Confidence            34455 6899999999988776  699999999999999999999999999999997    2344455669999999999


Q ss_pred             HHHCCCcEEEEeCC---CCCHHHHHHHHHcCCEEEEeCCCCCh----------------HHHHHHHHHHHHhCCCeEEcC
Q 028618           89 AAAKQYRLIITMPA---SMSLERRIILRAFGAELVLTDPAKGM----------------KGAVQKAEEILAKTPNAYMLQ  149 (206)
Q Consensus        89 a~~~g~~~~ivvp~---~~~~~~~~~~~~~Ga~v~~~~~~~~~----------------~~~~~~a~~~~~~~~~~~~~~  149 (206)
                      |+.+|++|+|||-.   ...+.++.+|+.+||+|+..+.+...                -=++..|.+.+-++++..|..
T Consensus       147 ~alf~lk~~V~Mvr~Sy~qKpyRk~lM~~yGa~V~pSPS~~Te~Grk~l~e~p~hPGSLGIAISEAiE~al~~~~~kY~l  226 (432)
T COG1350         147 AALFGLKATVFMVRVSYYQKPYRKYLMELYGAEVVPSPSELTEFGRKILKEDPDHPGSLGIAISEAIEYALKNENTKYSL  226 (432)
T ss_pred             HHHhCceeEEEEEehhhhcchHHHHHHHHhCCeecCCCcchhHHHHHHHhcCCCCCchhHHHHHHHHHHHHhCCCceecc
Confidence            99999999999966   35788899999999999999876421                114666667766665555543


Q ss_pred             CCCCCccHHHHHHhHHHHHHhh---hCCCCCEEEEccCcchHHHHHHHHHH
Q 028618          150 QFENPANPKIHYETTGPELWKG---SGGRIDALVSGIGTGGTITGAGKFLK  197 (206)
Q Consensus       150 ~~~~~~~~~~g~~t~~~Ei~~q---~~~~~d~vv~~vG~Gg~~aGi~~~~k  197 (206)
                      ..--.. ...|+..+|.|..+|   ++..||++|.|||+|++++|+..-|-
T Consensus       227 GSVlnh-vllhQTViGlEakkQle~~~e~PDv~igcvGGGSNfag~~yPfi  276 (432)
T COG1350         227 GSVLNH-VLLHQTVIGLEAKKQLEQAGEDPDVIIGCVGGGSNFAGLTYPFI  276 (432)
T ss_pred             hhHHHH-HHHHHHHHhHHHHHHHHhcCCCCCEEEEeccCCCccccccchhh
Confidence            322222 256999999999555   45679999999999999999986553

>KOG1395 consensus Tryptophan synthase beta chain [Amino acid transport and metabolism]

Probab=99.90  E-value=3.7e-23  Score=171.78  Aligned_cols=183  Identities=19%  Similarity=0.177  Sum_probs=137.7

Q ss_pred             hhcc-ccCCcceecccccCCC--CceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHH
Q 028618           12 VTEL-IGNTPLVYLNNIVNGC--VARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFM   88 (206)
Q Consensus        12 i~~~-~~~TPl~~~~~l~~~~--g~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~alA~~   88 (206)
                      |+.+ ..+|||+++++|.+.+  |.+||+|+|++||+||+|...|...+..+++.|+    +..|.+...|.||.|+|.+
T Consensus       115 iy~y~gRpspL~~AkRLte~~q~ga~IylKrEdlnh~GsHKiNnav~QallakrlGk----knviaETGAGQhGvatA~a  190 (477)
T KOG1395|consen  115 IYKYLGRPSPLIRAKRLTEHCQTGARIYLKREDLNHTGSHKINNAVAQALLAKRLGK----KNVIAETGAGQHGVATATA  190 (477)
T ss_pred             HHHHcCCCchhHHHHHHHHHhCCCCEEEEEecCCCccccCCcccHHHHHHHHHHhcc----cceeeccCCCccchHHHHH
Confidence            4433 4679999999998866  5799999999999999999999999999999998    3567777889999999999


Q ss_pred             HHHCCCcEEEEeCCC---CCHHHHHHHHHcCCEEEEeCCCC-ChHHHHHHHH-HHHHhCCCeEEcCCCC-----CCccHH
Q 028618           89 AAAKQYRLIITMPAS---MSLERRIILRAFGAELVLTDPAK-GMKGAVQKAE-EILAKTPNAYMLQQFE-----NPANPK  158 (206)
Q Consensus        89 a~~~g~~~~ivvp~~---~~~~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~-~~~~~~~~~~~~~~~~-----~~~~~~  158 (206)
                      |+++|++|+|+|-..   ..+.++-+|+.+||+|+.+.... ..+++-..+. .+.....-.+|+-...     -|....
T Consensus       191 ~a~FGl~C~v~mgAed~~rqalnvfrmrllGAkV~pv~sGt~tLrda~sea~r~wvt~~ett~y~~gs~~gphp~pt~vr  270 (477)
T KOG1395|consen  191 CAKFGLDCTVYMGAEDYRRQALNVFRMRLLGAKVHPVTSGTRTLRDATSEAGRLWVTNSETTHYAAGSAIGPHPYPTVVR  270 (477)
T ss_pred             HHHhCCceEEEechhHHHHHHHHHHHHHHhCceEeecCCCceehhcccchhhhhhhhhhheeeeeecccCCCCCcHHHHH
Confidence            999999999999653   35677889999999999997532 2344433332 2333332344432222     122222


Q ss_pred             HHHHhHHHHHHhhh----CCCCCEEEEccCcchHHHHHHHHHHh
Q 028618          159 IHYETTGPELWKGS----GGRIDALVSGIGTGGTITGAGKFLKE  198 (206)
Q Consensus       159 ~g~~t~~~Ei~~q~----~~~~d~vv~~vG~Gg~~aGi~~~~k~  198 (206)
                      .-+.+++.|-..|.    +..||.||.|+|+|++.+|+..-|..
T Consensus       271 ~fhsvIg~Et~~Q~me~~g~~PD~vvaCvGGGSN~~Glf~pF~~  314 (477)
T KOG1395|consen  271 TFHSVIGKETKIQQMEKFGKLPDAVVACVGGGSNSAGLFSPFIR  314 (477)
T ss_pred             HHHHHHhHHHHHHHHHHhCCCCCeEEEeccCCCccccccchhhc
Confidence            24667777765553    45699999999999999999887764

>COG3048 DsdA D-serine dehydratase [Amino acid transport and metabolism]

Probab=99.85  E-value=1.2e-20  Score=154.44  Aligned_cols=190  Identities=22%  Similarity=0.254  Sum_probs=158.9

Q ss_pred             hccccCCcceecccccC--------CCCceEEEEeCCCCCC-CChhhHHHHHHHHH-----HHHcCCCCCCCe-------
Q 028618           13 TELIGNTPLVYLNNIVN--------GCVARIAAKLEMMEPC-SSVKDRIGYSMISD-----AEAKGLITPGES-------   71 (206)
Q Consensus        13 ~~~~~~TPl~~~~~l~~--------~~g~~i~~K~E~~~pt-GS~K~R~a~~~~~~-----a~~~g~~~~~~~-------   71 (206)
                      ...+.++||++++.+.+        ...-++|+|+++.-|. ||+|.|+..|-+..     |.+.|.+...++       
T Consensus        73 ~~GiIES~lv~i~~mq~~Le~~Y~~~i~G~llLK~DshLpIsGSIKARGGIYEVL~hAE~LAle~Gll~~~DDYs~L~~~  152 (443)
T COG3048          73 TGGIIESPLVEIPAMQKRLEKEYQQPIPGRLLLKKDSHLPISGSIKARGGIYEVLKHAEKLALEAGLLTLEDDYSILLSE  152 (443)
T ss_pred             cCCeeccchhhhHHHHHHHHHHhcCCCCcceeeeccCCCCcccceeccccHHHHHHHHHHHHHhcCcccccchHHHhhcH
Confidence            34677899999876653        2234899999999985 99999998886642     457776544322       


Q ss_pred             ---------EEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhC
Q 028618           72 ---------VLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKT  142 (206)
Q Consensus        72 ---------~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~  142 (206)
                               .|...|+||.|++...+++.+|+++++.|+.++..||+++++..|.+|+....+  |..+++.-++.++.+
T Consensus       153 ~f~~FFs~ysIaVGSTGNLGlSIGI~sA~lGF~vtVHMSADAr~WKKd~LRs~gV~ViEYe~D--Y~~AVeeGRk~a~~D  230 (443)
T COG3048         153 EFKDFFSRYSIAVGSTGNLGLSIGIMSAALGFKVTVHMSADARAWKKDKLRSHGVTVVEYEQD--YGVAVEEGRKEAESD  230 (443)
T ss_pred             HHHHHHHhheEeecccCccceehhhhhhhhcceEEEEecchHHHHHHHHHHhcCceEEEecch--hhHHHHHhhhhhccC
Confidence                     688899999999999999999999999999999999999999999999999988  668999999999999


Q ss_pred             CCeEEcCCCCCCccHHHHHHhHHHHHHhhhC--------CCCCEEEEccCcchHHHHHHHHHHhcC-CCCeE
Q 028618          143 PNAYMLQQFENPANPKIHYETTGPELWKGSG--------GRIDALVSGIGTGGTITGAGKFLKEKN-PNIKV  205 (206)
Q Consensus       143 ~~~~~~~~~~~~~~~~~g~~t~~~Ei~~q~~--------~~~d~vv~~vG~Gg~~aGi~~~~k~~~-p~~~v  205 (206)
                      |.+||++.-++... ..||...+..+-.|++        ..|-.|.+|+|.||.-.|++.++|..+ .++.+
T Consensus       231 P~c~FiDDE~S~~L-FLGYaVAa~Rlk~Q~d~~gi~vd~ehPLfVylPCGVGGgPGGVafGLKl~fgd~Vhc  301 (443)
T COG3048         231 PNCFFIDDENSRTL-FLGYAVAAQRLKKQFDEQGIVVDAEHPLFVYLPCGVGGGPGGVAFGLKLAFGDHVHC  301 (443)
T ss_pred             CceEEecccchhhh-hhhHHHHHHHHHHHHHhcCceecCCCceEEEeecCCCCCcchhhhhhHhhhcCceEE
Confidence            99999988555544 6799999999988874        247799999999999999999999876 34544

>PF03808 Glyco_tran_WecB: Glycosyl transferase WecB/TagA/CpsF family; InterPro: IPR004629 The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in Enterobacterial common antigen (eca) synthesis in Escherichia coli

Probab=94.97  E-value=0.27  Score=37.98  Aligned_cols=99  Identities=10%  Similarity=0.074  Sum_probs=60.6

Q ss_pred             HHHHHHHHHHCCCcEE-EEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHH
Q 028618           82 GIGLAFMAAAKQYRLI-ITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIH  160 (206)
Q Consensus        82 g~alA~~a~~~g~~~~-ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g  160 (206)
                      |..+.++++.+|.++- -+...+.-..-.+.+...|..|.+++++.  ....+.+..+.+++|+.-.+.-++-+.. ..-
T Consensus        13 G~~i~~~~~~~g~~~~~rv~g~dl~~~l~~~~~~~~~~ifllG~~~--~~~~~~~~~l~~~yP~l~ivg~~~g~f~-~~~   89 (172)
T PF03808_consen   13 GMPIVWAARLLGRPLPERVTGSDLFPDLLRRAEQRGKRIFLLGGSE--EVLEKAAANLRRRYPGLRIVGYHHGYFD-EEE   89 (172)
T ss_pred             CHHHHHHHHHcCCCCCcccCHHHHHHHHHHHHHHcCCeEEEEeCCH--HHHHHHHHHHHHHCCCeEEEEecCCCCC-hhh
Confidence            5788999999998873 22222334455666677889999999873  3455556677777777655432222122 112


Q ss_pred             HHhHHHHHHhhhC-CCCCEEEEccCcch
Q 028618          161 YETTGPELWKGSG-GRIDALVSGIGTGG  187 (206)
Q Consensus       161 ~~t~~~Ei~~q~~-~~~d~vv~~vG~Gg  187 (206)
                      .    .+|.+++. ..||.|+++.|+--
T Consensus        90 ~----~~i~~~I~~~~pdiv~vglG~Pk  113 (172)
T PF03808_consen   90 E----EAIINRINASGPDIVFVGLGAPK  113 (172)
T ss_pred             H----HHHHHHHHHcCCCEEEEECCCCH
Confidence            2    23444432 35899999998754

Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.; GO: 0009058 biosynthetic process

>cd06533 Glyco_transf_WecG_TagA The glycosyltransferase WecG/TagA superfamily contains Escherichia coli WecG, Bacillus subtilis TagA and related proteins

Probab=93.71  E-value=0.94  Score=34.92  Aligned_cols=99  Identities=18%  Similarity=0.170  Sum_probs=58.8

Q ss_pred             HHHHHHHHHHCCCcEEEEeCCC-CCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHH
Q 028618           82 GIGLAFMAAAKQYRLIITMPAS-MSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIH  160 (206)
Q Consensus        82 g~alA~~a~~~g~~~~ivvp~~-~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g  160 (206)
                      |..+.++++.+|.+..--++.. .-..-.+.+...+..|.+++.+.  +...+.++.+.+++|+...+...+.+... ..
T Consensus        11 G~~l~~~~~~~~~~~~~r~~g~dl~~~ll~~~~~~~~~v~llG~~~--~~~~~~~~~l~~~yp~l~i~g~~~g~~~~-~~   87 (171)
T cd06533          11 GIGVVWAARLLGGPLPERVTGSDLMPALLELAAQKGLRVFLLGAKP--EVLEKAAERLRARYPGLKIVGYHHGYFGP-EE   87 (171)
T ss_pred             cHHHHHHHHHcCCCCCcccCcHHHHHHHHHHHHHcCCeEEEECCCH--HHHHHHHHHHHHHCCCcEEEEecCCCCCh-hh
Confidence            5788999999998833333332 22344555666789999999873  34444455677778876544322222221 11


Q ss_pred             HHhHHHHHHhhhC-CCCCEEEEccCcch
Q 028618          161 YETTGPELWKGSG-GRIDALVSGIGTGG  187 (206)
Q Consensus       161 ~~t~~~Ei~~q~~-~~~d~vv~~vG~Gg  187 (206)
                      .    .++.+++. ..||.|+++.|+--
T Consensus        88 ~----~~i~~~I~~~~pdiv~vglG~Pk  111 (171)
T cd06533          88 E----EEIIERINASGADILFVGLGAPK  111 (171)
T ss_pred             H----HHHHHHHHHcCCCEEEEECCCCH
Confidence            1    12444442 35999999999753

E. coli WecG is believed to be a UDP-N-acetyl-D-mannosaminuronic acid transferase, and is involved in enterobacterial common antigen (eca) synthesis. B. subtilis TagA plays a key role in the Wall Teichoic Acid (WTA) biosynthetic pathway, catalyzing the transfer of N-acetylmannosamine to the C4 hydroxyl of a membrane-anchored N-acetylglucosaminyl diphospholipid to make ManNAc-beta-(1,4)-GlcNAc-pp-undecaprenyl. This is the first committed step in this pathway. Also included in this group is Xanthomonas campestris pv. campestris GumM, a glycosyltransferase participating in the biosynthesis of the exopolysaccharide xanthan.

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=91.77  E-value=1.3  Score=31.81  Aligned_cols=41  Identities=24%  Similarity=0.250  Sum_probs=28.9

Q ss_pred             HHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCC
Q 028618           82 GIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPA  125 (206)
Q Consensus        82 g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~  125 (206)
                      |+.....|+.+|.+++++.+   .+.|++.++.+|++.+....+
T Consensus         3 G~~a~q~ak~~G~~vi~~~~---~~~k~~~~~~~Ga~~~~~~~~   43 (130)
T PF00107_consen    3 GLMAIQLAKAMGAKVIATDR---SEEKLELAKELGADHVIDYSD   43 (130)
T ss_dssp             HHHHHHHHHHTTSEEEEEES---SHHHHHHHHHTTESEEEETTT
T ss_pred             HHHHHHHHHHcCCEEEEEEC---CHHHHHHHHhhcccccccccc
Confidence            56677778888865555543   557788888888877766654

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>cd08230 glucose_DH Glucose dehydrogenase

Probab=91.72  E-value=1.4  Score=37.48  Aligned_cols=54  Identities=15%  Similarity=0.189  Sum_probs=42.1

Q ss_pred             CCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEE
Q 028618           66 ITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV  120 (206)
Q Consensus        66 ~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~  120 (206)
                      ..++++.+|. ..|..|...+..++..|.+++++.+...++.|++.++.+|++.+
T Consensus       170 ~~~g~~vlI~-G~G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~~~~~~Ga~~v  223 (355)
T cd08230         170 TWNPRRALVL-GAGPIGLLAALLLRLRGFEVYVLNRRDPPDPKADIVEELGATYV  223 (355)
T ss_pred             cCCCCEEEEE-CCCHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEe
Confidence            3455566665 46999999999999999987766665557788999999999874

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>PF07279 DUF1442: Protein of unknown function (DUF1442); InterPro: IPR009902 This family consists of several hypothetical Arabidopsis thaliana proteins of around 225 residues in length

Probab=91.55  E-value=3.5  Score=33.12  Aligned_cols=55  Identities=31%  Similarity=0.331  Sum_probs=36.9

Q ss_pred             HHHcCCCCCCCeEEEee-CCC---chHHHHHHHHHHCCCcEEEEeCCCCC-HHHHHHHHHcCC
Q 028618           60 AEAKGLITPGESVLIEP-TSG---NTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGA  117 (206)
Q Consensus        60 a~~~g~~~~~~~~vv~a-SsG---N~g~alA~~a~~~g~~~~ivvp~~~~-~~~~~~~~~~Ga  117 (206)
                      |..-|.-.   +.+|++ |.|   .+.+|||.+|++-|=+.+.++|+... ..-.+.|..+|.
T Consensus        35 AlAAG~nA---kliVe~~s~g~~~~ttiaLaaAAr~TgGR~vCIvp~~~~~~~~~~~l~~~~~   94 (218)
T PF07279_consen   35 ALAAGWNA---KLIVEAWSSGGAISTTIALAAAARQTGGRHVCIVPDEQSLSEYKKALGEAGL   94 (218)
T ss_pred             HHhccccc---eEEEEEecCCCchHhHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHhhccc
Confidence            45555422   445555 554   36899999999999999999999654 344445555553

The function of this family is unknown.

>TIGR00696 wecB_tagA_cpsF bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family

Probab=91.53  E-value=2.5  Score=32.88  Aligned_cols=95  Identities=12%  Similarity=0.062  Sum_probs=54.3

Q ss_pred             HHHHHHHHHHCCCcEEEEeCCC-CCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEc--CCCCCCccHH
Q 028618           82 GIGLAFMAAAKQYRLIITMPAS-MSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYML--QQFENPANPK  158 (206)
Q Consensus        82 g~alA~~a~~~g~~~~ivvp~~-~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~--~~~~~~~~~~  158 (206)
                      |..+.++++.+|.+..--++.. .-..-.+.....|..|.+++...  ....+.++.+.+++|+.-..  ++|-++..  
T Consensus        13 G~~iv~~~r~~g~~~~~Rv~G~dl~~~l~~~~~~~~~~vfllG~~~--~v~~~~~~~l~~~yP~l~i~g~~g~f~~~~--   88 (177)
T TIGR00696        13 GIGVVWGLKLLGYPQQSRVAGPDLMEELCQRAGKEKLPIFLYGGKP--DVLQQLKVKLIKEYPKLKIVGAFGPLEPEE--   88 (177)
T ss_pred             cHHHHHHHHHcCCCCCCccChHHHHHHHHHHHHHcCCeEEEECCCH--HHHHHHHHHHHHHCCCCEEEEECCCCChHH--
Confidence            4678889999986642222221 12233444556788999998873  34455566677777765433  22222211  


Q ss_pred             HHHHhHHHHHHhhhC-CCCCEEEEccCcc
Q 028618          159 IHYETTGPELWKGSG-GRIDALVSGIGTG  186 (206)
Q Consensus       159 ~g~~t~~~Ei~~q~~-~~~d~vv~~vG~G  186 (206)
                        .    .++.+++. ..+|.|+|+.|+=
T Consensus        89 --~----~~i~~~I~~s~~dil~VglG~P  111 (177)
T TIGR00696        89 --R----KAALAKIARSGAGIVFVGLGCP  111 (177)
T ss_pred             --H----HHHHHHHHHcCCCEEEEEcCCc
Confidence              1    23444442 2589999988853

The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=90.88  E-value=3.9  Score=34.79  Aligned_cols=57  Identities=21%  Similarity=0.344  Sum_probs=40.4

Q ss_pred             HcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEe
Q 028618           62 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLT  122 (206)
Q Consensus        62 ~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~  122 (206)
                      .+..+.++++.+|... |..|.+++..|+.+|.+++++   +.++.+++.++.+|++.++.
T Consensus       160 ~~~~~~~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~---~~~~~~~~~~~~~Ga~~~i~  216 (349)
T TIGR03201       160 VQAGLKKGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAI---DIDPEKLEMMKGFGADLTLN  216 (349)
T ss_pred             HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEE---cCCHHHHHHHHHhCCceEec
Confidence            3445677766655555 999999999999999975443   33556777778888865543

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=90.84  E-value=1.4  Score=35.06  Aligned_cols=52  Identities=25%  Similarity=0.326  Sum_probs=42.2

Q ss_pred             EEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCC
Q 028618           73 LIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPA  125 (206)
Q Consensus        73 vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~  125 (206)
                      +|++.+|+.|..++.+....+.++++++... +....+.++..|++++..+-+
T Consensus         2 ~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~-~~~~~~~l~~~g~~vv~~d~~   53 (233)
T PF05368_consen    2 LVTGATGNQGRSVVRALLSAGFSVRALVRDP-SSDRAQQLQALGAEVVEADYD   53 (233)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTGCEEEEESSS-HHHHHHHHHHTTTEEEES-TT
T ss_pred             EEECCccHHHHHHHHHHHhCCCCcEEEEecc-chhhhhhhhcccceEeecccC
Confidence            5778899999999999999999999999876 444566778899998866543

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PF00764 Arginosuc_synth: Arginosuccinate synthase; InterPro: IPR001518 Argininosuccinate synthase (6

Probab=90.79  E-value=2.6  Score=36.95  Aligned_cols=125  Identities=17%  Similarity=0.197  Sum_probs=72.5

Q ss_pred             EeeCCC-chHHHHHHHHHHCCCcEEEEeCC-CCC----HHHHHHHHHcCC-EEEEeCCCCChHHHHHHHHHHHHhCCCeE
Q 028618           74 IEPTSG-NTGIGLAFMAAAKQYRLIITMPA-SMS----LERRIILRAFGA-ELVLTDPAKGMKGAVQKAEEILAKTPNAY  146 (206)
Q Consensus        74 v~aSsG-N~g~alA~~a~~~g~~~~ivvp~-~~~----~~~~~~~~~~Ga-~v~~~~~~~~~~~~~~~a~~~~~~~~~~~  146 (206)
                      +..|+| .+...+.|...+.+++++.|.-+ ..+    ....+....+|| +++.++....+  +.+.+....+.  +..
T Consensus         2 LAySGGLDTS~~l~~L~e~~~~~Via~~aDlGq~~~d~~~i~~kA~~~Ga~~~~vvD~r~ef--~~~~i~~aI~a--nA~   77 (388)
T PF00764_consen    2 LAYSGGLDTSVILKWLKEEGGYEVIAVTADLGQPDEDLEAIEEKALKLGASKHIVVDARDEF--AEDYIFPAIKA--NAL   77 (388)
T ss_dssp             EE--SSHHHHHHHHHHHHTTTEEEEEEEEESSST-S-HHHHHHHHHHHT-SEEEEEE-HHHH--HHHTHHHHHHT--T--
T ss_pred             eeeCCChHHHHHHHHHHhhcCceEEEEEEECCCcHHHHHHHHHHHHhcCCceeeecchHHHH--HHHHHHHHHHH--HHH
Confidence            445666 56677788888888999998743 222    344556788999 99999864211  11222223232  233


Q ss_pred             EcCCC---CCCccHHHHHHhHHHHHHhhhCCCCCEEEE-ccCcchHHHHHHHHHHhcCCCCeEC
Q 028618          147 MLQQF---ENPANPKIHYETTGPELWKGSGGRIDALVS-GIGTGGTITGAGKFLKEKNPNIKVR  206 (206)
Q Consensus       147 ~~~~~---~~~~~~~~g~~t~~~Ei~~q~~~~~d~vv~-~vG~Gg~~aGi~~~~k~~~p~~~vi  206 (206)
                      |.+.|   .....|.  ...-..|+.++.  ..++|.. ++|-|--..=.-.+++.+.|+.+||
T Consensus        78 Yeg~YpL~tsl~Rpl--Ia~~~v~~A~~~--ga~~vaHG~TgkGNDqvRFe~~~~al~P~l~vi  137 (388)
T PF00764_consen   78 YEGRYPLSTSLARPL--IAKKLVEVAREE--GADAVAHGCTGKGNDQVRFELSIRALAPELKVI  137 (388)
T ss_dssp             BTTTB--CCCCHHHH--HHHHHHHHHHHH--T-SEEE----TTSSHHHHHHHHHHHHSTTSEEE
T ss_pred             hCCCccccccchHHH--HHHHHHHHHHHc--CCeEEeccCCcCCCchhHHHHHHHHhCcCCcEe
Confidence            33322   2223333  233445667766  3688888 5688889999999999999999986

3.4.5 from EC) (AS) is a urea cycle enzyme that catalyzes the penultimate step in arginine biosynthesis: the ATP-dependent ligation of citrulline to aspartate to form argininosuccinate, AMP and pyrophosphate [, ]. In humans, a defect in the AS gene causes citrullinemia, a genetic disease characterised by severe vomiting spells and mental retardation. AS is a homotetrameric enzyme of chains of about 400 amino-acid residues. An arginine seems to be important for the enzyme's catalytic mechanism. The sequences of AS from various prokaryotes, archaebacteria and eukaryotes show significant similarity.; GO: 0004055 argininosuccinate synthase activity, 0005524 ATP binding, 0006526 arginine biosynthetic process; PDB: 1K97_A 1KP2_A 1K92_A 1KP3_A 2NZ2_A 1VL2_A 1J1Z_D 1KOR_C 1J20_D 1KH2_C ....

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=90.18  E-value=4.7  Score=33.52  Aligned_cols=59  Identities=20%  Similarity=0.229  Sum_probs=43.9

Q ss_pred             HcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeC
Q 028618           62 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTD  123 (206)
Q Consensus        62 ~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~  123 (206)
                      +...+.+|+..+|.+.+|..|.++.-.|+.+|++++++.   .++.+.+.++.+|++-++..
T Consensus       137 ~~~~~~~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~---~s~~~~~~l~~~Ga~~vi~~  195 (329)
T cd08294         137 EICKPKAGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCA---GSDDKVAWLKELGFDAVFNY  195 (329)
T ss_pred             HhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEe---CCHHHHHHHHHcCCCEEEeC
Confidence            445567776777777789999999999999999865553   34567788888998655443

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=89.94  E-value=5.2  Score=34.11  Aligned_cols=57  Identities=26%  Similarity=0.451  Sum_probs=44.5

Q ss_pred             cCCCCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEe
Q 028618           63 KGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLT  122 (206)
Q Consensus        63 ~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~  122 (206)
                      ...+++|++.+|.+.+|.-|..+.-.|+.+|..+++...   +..+.+.++.+||+.+..
T Consensus       137 ~~~l~~g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~---s~~k~~~~~~lGAd~vi~  193 (326)
T COG0604         137 RAGLKPGETVLVHGAAGGVGSAAIQLAKALGATVVAVVS---SSEKLELLKELGADHVIN  193 (326)
T ss_pred             hcCCCCCCEEEEecCCchHHHHHHHHHHHcCCcEEEEec---CHHHHHHHHhcCCCEEEc
Confidence            456777888999999999999999999999984444432   336666899999977765

>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional

Probab=89.29  E-value=7.5  Score=36.11  Aligned_cols=52  Identities=15%  Similarity=0.252  Sum_probs=42.2

Q ss_pred             eEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCC
Q 028618           71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPA  125 (206)
Q Consensus        71 ~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~  125 (206)
                      ..++.+..|..|+.+|..-...|++++++   +..+.+.+.++.+|.+++.-+..
T Consensus       401 ~~vII~G~Gr~G~~va~~L~~~g~~vvvI---D~d~~~v~~~~~~g~~v~~GDat  452 (601)
T PRK03659        401 PQVIIVGFGRFGQVIGRLLMANKMRITVL---ERDISAVNLMRKYGYKVYYGDAT  452 (601)
T ss_pred             CCEEEecCchHHHHHHHHHHhCCCCEEEE---ECCHHHHHHHHhCCCeEEEeeCC
Confidence            45888999999999999999999998777   33456777888899888776655

>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]

Probab=89.00  E-value=2.4  Score=35.78  Aligned_cols=89  Identities=22%  Similarity=0.266  Sum_probs=60.7

Q ss_pred             eEEEEeCCCCC-----CCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCC-HH
Q 028618           34 RIAAKLEMMEP-----CSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LE  107 (206)
Q Consensus        34 ~i~~K~E~~~p-----tGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~-~~  107 (206)
                      +-++|.++.-|     |-|.---.|+-|+.+-.+   +++|+..+=-++.+--|+++--.|+.+||+.+-++.+... ++
T Consensus       124 ~~Li~vd~~~pl~~AAT~~VNP~TAyrmL~dfv~---L~~GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~iee  200 (354)
T KOG0025|consen  124 SDLIKVDKDIPLASAATLSVNPCTAYRMLKDFVQ---LNKGDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEE  200 (354)
T ss_pred             cceEEcCCcCChhhhheeccCchHHHHHHHHHHh---cCCCCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHH
Confidence            45677776444     234444467778877665   4456432222333456778888999999999999988754 45


Q ss_pred             HHHHHHHcCCEEEEeCCC
Q 028618          108 RRIILRAFGAELVLTDPA  125 (206)
Q Consensus       108 ~~~~~~~~Ga~v~~~~~~  125 (206)
                      -.++++.+||+-++.+..
T Consensus       201 l~~~Lk~lGA~~ViTeee  218 (354)
T KOG0025|consen  201 LKKQLKSLGATEVITEEE  218 (354)
T ss_pred             HHHHHHHcCCceEecHHH
Confidence            567889999998887654

>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent

Probab=88.84  E-value=7.7  Score=33.87  Aligned_cols=57  Identities=26%  Similarity=0.338  Sum_probs=42.1

Q ss_pred             HcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEE
Q 028618           62 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVL  121 (206)
Q Consensus        62 ~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~  121 (206)
                      +...+.++++.+| ..+|..|+.++..|+.+|.+.+++.  +..+.+++..+.+|++.+.
T Consensus       179 ~~~~~~~g~~VlV-~G~G~iG~~aiqlAk~~Ga~~vi~~--d~~~~r~~~a~~~Ga~~v~  235 (393)
T TIGR02819       179 VTAGVGPGSTVYI-AGAGPVGLAAAASAQLLGAAVVIVG--DLNPARLAQARSFGCETVD  235 (393)
T ss_pred             HhcCCCCCCEEEE-ECCCHHHHHHHHHHHHcCCceEEEe--CCCHHHHHHHHHcCCeEEe
Confidence            3345677766556 6779999999999999999876643  2246788888899997543

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.

>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional

Probab=88.56  E-value=8.9  Score=35.78  Aligned_cols=52  Identities=15%  Similarity=0.206  Sum_probs=43.4

Q ss_pred             eEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCC
Q 028618           71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPA  125 (206)
Q Consensus        71 ~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~  125 (206)
                      ..++.+..|..|+.+|..-+..|++++++   +..+.+.+.++.+|.+++.-|.+
T Consensus       401 ~~vII~G~Gr~G~~va~~L~~~g~~vvvI---D~d~~~v~~~~~~g~~v~~GDat  452 (621)
T PRK03562        401 PRVIIAGFGRFGQIVGRLLLSSGVKMTVL---DHDPDHIETLRKFGMKVFYGDAT  452 (621)
T ss_pred             CcEEEEecChHHHHHHHHHHhCCCCEEEE---ECCHHHHHHHHhcCCeEEEEeCC
Confidence            46888999999999999999999998887   44566788888899888776665

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=88.25  E-value=4.3  Score=33.36  Aligned_cols=53  Identities=28%  Similarity=0.312  Sum_probs=39.3

Q ss_pred             CCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEE
Q 028618           66 ITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVL  121 (206)
Q Consensus        66 ~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~  121 (206)
                      ..+++..+|. ..|..|..++..|+.+|.+.++++  +.++.|.+..+.+|++.+.
T Consensus       118 ~~~g~~VlV~-G~G~vG~~~~~~ak~~G~~~Vi~~--~~~~~r~~~a~~~Ga~~~i  170 (280)
T TIGR03366       118 DLKGRRVLVV-GAGMLGLTAAAAAAAAGAARVVAA--DPSPDRRELALSFGATALA  170 (280)
T ss_pred             CCCCCEEEEE-CCCHHHHHHHHHHHHcCCCEEEEE--CCCHHHHHHHHHcCCcEec
Confidence            3466555555 568899999999999999845554  4466788888999997654

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>PRK08862 short chain dehydrogenase; Provisional

Probab=88.14  E-value=10  Score=30.20  Aligned_cols=54  Identities=13%  Similarity=0.044  Sum_probs=36.0

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCC-HHHHHHHHHcCCEEEEeC
Q 028618           70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVLTD  123 (206)
Q Consensus        70 ~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~-~~~~~~~~~~Ga~v~~~~  123 (206)
                      +..+|++.++.-|.++|......|.+++++-..... ....+.++..|.+++.+.
T Consensus         6 k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~   60 (227)
T PRK08862          6 SIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQ   60 (227)
T ss_pred             eEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEE
Confidence            367888888889999999999999987766443221 112334556676665543

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=87.55  E-value=5.3  Score=34.19  Aligned_cols=61  Identities=21%  Similarity=0.309  Sum_probs=46.1

Q ss_pred             HHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCC
Q 028618           60 AEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDP  124 (206)
Q Consensus        60 a~~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~  124 (206)
                      +++.| +.||+..-|..-+| .|.----+|+.+|++++++-..  +..|.+.++.+||+......
T Consensus       174 Lk~~g-~~pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~--~~kkeea~~~LGAd~fv~~~  234 (360)
T KOG0023|consen  174 LKRSG-LGPGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTS--SKKKEEAIKSLGADVFVDST  234 (360)
T ss_pred             hHHcC-CCCCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCC--chhHHHHHHhcCcceeEEec
Confidence            34555 45887666666666 8877778899999999999433  44677889999999988866

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=87.49  E-value=9  Score=34.90  Aligned_cols=50  Identities=16%  Similarity=0.102  Sum_probs=41.2

Q ss_pred             eEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeC
Q 028618           71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTD  123 (206)
Q Consensus        71 ~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~  123 (206)
                      ..++....|..|++.+..|+.+|-+++++   +..+.++++.+.+|++.+.++
T Consensus       166 ~kVlViGaG~iGL~Ai~~Ak~lGA~V~a~---D~~~~rle~aeslGA~~v~i~  215 (509)
T PRK09424        166 AKVLVIGAGVAGLAAIGAAGSLGAIVRAF---DTRPEVAEQVESMGAEFLELD  215 (509)
T ss_pred             CEEEEECCcHHHHHHHHHHHHCCCEEEEE---eCCHHHHHHHHHcCCeEEEec
Confidence            57888999999999999999999864444   557788999999999966554

>PRK08703 short chain dehydrogenase; Provisional

Probab=87.00  E-value=9.7  Score=30.15  Aligned_cols=32  Identities=22%  Similarity=0.221  Sum_probs=26.4

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHCCCcEEEEeC
Q 028618           70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMP  101 (206)
Q Consensus        70 ~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp  101 (206)
                      ++.+|+..+|..|.++|......|.+++++.+
T Consensus         7 k~vlItG~sggiG~~la~~l~~~g~~V~~~~r   38 (239)
T PRK08703          7 KTILVTGASQGLGEQVAKAYAAAGATVILVAR   38 (239)
T ss_pred             CEEEEECCCCcHHHHHHHHHHHcCCEEEEEeC
Confidence            36789999999999999999888887666544

>TIGR00670 asp_carb_tr aspartate carbamoyltransferase

Probab=86.85  E-value=4.2  Score=34.42  Aligned_cols=46  Identities=22%  Similarity=0.145  Sum_probs=37.2

Q ss_pred             CchHHHHHHHHHHCCCcEEEEeCCCC--CHHHHHHHHHcCCEEEEeCC
Q 028618           79 GNTGIGLAFMAAAKQYRLIITMPASM--SLERRIILRAFGAELVLTDP  124 (206)
Q Consensus        79 GN~g~alA~~a~~~g~~~~ivvp~~~--~~~~~~~~~~~Ga~v~~~~~  124 (206)
                      +|.++++..+++++|++++++.|+..  ++..++.++..|+++...+.
T Consensus       162 ~~v~~Sl~~~~a~~g~~v~~~~P~~~~~~~~~~~~~~~~G~~v~~~~d  209 (301)
T TIGR00670       162 GRTVHSLAEALTRFGVEVYLISPEELRMPKEILEELKAKGIKVRETES  209 (301)
T ss_pred             CcHHHHHHHHHHHcCCEEEEECCccccCCHHHHHHHHHcCCEEEEECC
Confidence            69999999999999999999999974  55556666677887766543

Ornithine carbamoyltransferases are in the same superfamily and form an outgroup.

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=86.74  E-value=8.9  Score=30.27  Aligned_cols=68  Identities=19%  Similarity=0.149  Sum_probs=45.0

Q ss_pred             hHHHHHHHHHHHHc--CCCCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHH-HHcCCEEE
Q 028618           50 DRIGYSMISDAEAK--GLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIIL-RAFGAELV  120 (206)
Q Consensus        50 ~R~a~~~~~~a~~~--g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~-~~~Ga~v~  120 (206)
                      .+|..+.+..+.+.  +......++++.-..||.|..+|......|.+++++ .  ..+.+.+.+ ..+|++.+
T Consensus         6 g~Gv~~~~~~~~~~~~~~~~l~gk~v~I~G~G~vG~~~A~~L~~~G~~Vvv~-D--~~~~~~~~~~~~~g~~~v   76 (200)
T cd01075           6 AYGVFLGMKAAAEHLLGTDSLEGKTVAVQGLGKVGYKLAEHLLEEGAKLIVA-D--INEEAVARAAELFGATVV   76 (200)
T ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEE-c--CCHHHHHHHHHHcCCEEE
Confidence            47788888877655  222332356777788999999999999999988754 2  233444444 34476543

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=86.73  E-value=8  Score=32.47  Aligned_cols=57  Identities=28%  Similarity=0.397  Sum_probs=42.7

Q ss_pred             HHcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEE
Q 028618           61 EAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVL  121 (206)
Q Consensus        61 ~~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~  121 (206)
                      .+...+.+++..+|...+|..|.+++..|+.+|.+++++.+.   . +++.++.+|++.+.
T Consensus       170 ~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~vi~~~~~---~-~~~~~~~~g~~~~~  226 (350)
T cd08274         170 LERAGVGAGETVLVTGASGGVGSALVQLAKRRGAIVIAVAGA---A-KEEAVRALGADTVI  226 (350)
T ss_pred             HhhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCc---h-hhHHHHhcCCeEEE
Confidence            345556777777777778999999999999999996655432   2 66777889987544

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=86.70  E-value=6.8  Score=32.75  Aligned_cols=58  Identities=19%  Similarity=0.298  Sum_probs=44.0

Q ss_pred             HcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEe
Q 028618           62 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLT  122 (206)
Q Consensus        62 ~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~  122 (206)
                      +.+.+.+|+..+|.+.+|-.|.+++..|+..|.++++..+   ++.+.+.++.+|++.++.
T Consensus       132 ~~~~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~---s~~~~~~~~~lGa~~vi~  189 (325)
T TIGR02825       132 EICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAG---SDEKVAYLKKLGFDVAFN  189 (325)
T ss_pred             HHhCCCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHHcCCCEEEe
Confidence            4556777777777777899999999999999998665543   456778888899865544

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=86.50  E-value=6  Score=31.80  Aligned_cols=56  Identities=25%  Similarity=0.315  Sum_probs=39.1

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCC
Q 028618           70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPA  125 (206)
Q Consensus        70 ~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~  125 (206)
                      +..+|+..+|.-|.++|......|.+++++-.........+.+...|.++..+..|
T Consensus         9 k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D   64 (260)
T PRK12823          9 KVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVHEVAAELRAAGGEALALTAD   64 (260)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchHHHHHHHHHHhcCCeEEEEEEe
Confidence            36789999999999999999999998877654422223334455667776655433

>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions

Probab=86.23  E-value=2  Score=36.99  Aligned_cols=94  Identities=18%  Similarity=0.168  Sum_probs=55.9

Q ss_pred             eEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHHHhCCC-eEEc
Q 028618           71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPA-KGMKGAVQKAEEILAKTPN-AYML  148 (206)
Q Consensus        71 ~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~~~~-~~~~  148 (206)
                      ...+..+||..|+-+|+.+..++=.-.|++|.-+...-...+...|+++++++-+ .++.=..+..++...++.. .+.+
T Consensus        41 ~~~~~~~sgt~Al~~al~~l~~~~gdeVi~p~~t~~~~~~ai~~~G~~pv~~Di~~~~~~id~~~~~~~i~~~t~ai~~~  120 (363)
T PF01041_consen   41 KYAVAVSSGTSALHLALRALGLGPGDEVIVPAYTFPATASAILWAGAEPVFVDIDPETLNIDPEALEKAITPKTKAILVV  120 (363)
T ss_dssp             SEEEEESSHHHHHHHHHHHTTGGTTSEEEEESSS-THHHHHHHHTT-EEEEE-BETTTSSB-HHHHHHHHHTTEEEEEEE
T ss_pred             CeEEEeCChhHHHHHHHHhcCCCcCceEecCCCcchHHHHHHHHhccEEEEEeccCCcCCcCHHHHHHHhccCccEEEEe
Confidence            4678889999998888888333333788889988888899999999999999865 2221112223333333323 3456


Q ss_pred             CCCCCCccHHHHHHhHH
Q 028618          149 QQFENPANPKIHYETTG  165 (206)
Q Consensus       149 ~~~~~~~~~~~g~~t~~  165 (206)
                      +.++++.. +.....++
T Consensus       121 h~~G~~~d-~~~i~~~~  136 (363)
T PF01041_consen  121 HLFGNPAD-MDAIRAIA  136 (363)
T ss_dssp             -GGGB----HHHHHHHH
T ss_pred             cCCCCccc-HHHHHHHH
Confidence            77777765 44444443

The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=86.19  E-value=11  Score=31.89  Aligned_cols=74  Identities=20%  Similarity=0.166  Sum_probs=52.3

Q ss_pred             CCeEEEeeCCCchHHHHHHHHHHCCCcEEEEe-CCCCCHHHHHHHHHcC-CEEEEeCCCCChHHHHHHHHHHHHhCC
Q 028618           69 GESVLIEPTSGNTGIGLAFMAAAKQYRLIITM-PASMSLERRIILRAFG-AELVLTDPAKGMKGAVQKAEEILAKTP  143 (206)
Q Consensus        69 ~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivv-p~~~~~~~~~~~~~~G-a~v~~~~~~~~~~~~~~~a~~~~~~~~  143 (206)
                      |+..+||.+++-.|+++|.-.+++|.+.++.- -.....+..+.++..| +.-..++-+. .++..+.+.+..++.+
T Consensus        38 g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~-~eei~~~a~~Vk~e~G  113 (300)
T KOG1201|consen   38 GEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISD-REEIYRLAKKVKKEVG  113 (300)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCC-HHHHHHHHHHHHHhcC
Confidence            44788888998999999999999998544442 2234456666777667 5555666554 5677788888888764

>PRK08628 short chain dehydrogenase; Provisional

Probab=85.99  E-value=8  Score=30.99  Aligned_cols=56  Identities=14%  Similarity=0.090  Sum_probs=41.0

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCC
Q 028618           70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPA  125 (206)
Q Consensus        70 ~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~  125 (206)
                      +..+|+..+|-.|.++|..-...|.+++++..........+.++..|.++..+..|
T Consensus         8 ~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D   63 (258)
T PRK08628          8 KVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELRALQPRAEFVQVD   63 (258)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhHHHHHHHHhcCCceEEEEcc
Confidence            36788888899999999999999999888765443333345566678777666554

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=85.88  E-value=7.5  Score=31.25  Aligned_cols=56  Identities=18%  Similarity=0.202  Sum_probs=39.6

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCC
Q 028618           70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPA  125 (206)
Q Consensus        70 ~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~  125 (206)
                      +..+|+..+|.-|.++|......|.+++++......+...+.+...+.++..+..|
T Consensus        16 k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   71 (258)
T PRK06935         16 KVAIVTGGNTGLGQGYAVALAKAGADIIITTHGTNWDETRRLIEKEGRKVTFVQVD   71 (258)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhcCCceEEEEcC
Confidence            36889999999999999999999999888876522222334455567666655444

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=85.81  E-value=12  Score=31.55  Aligned_cols=57  Identities=21%  Similarity=0.230  Sum_probs=43.0

Q ss_pred             HcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHH-cCCEEEE
Q 028618           62 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRA-FGAELVL  121 (206)
Q Consensus        62 ~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~-~Ga~v~~  121 (206)
                      +.+.+++|+..+|.+.+|..|.+++-.|+.+|.++++..+   ++.+.+.++. +|++-++
T Consensus       145 ~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~---~~~~~~~~~~~lGa~~vi  202 (338)
T cd08295         145 EVCKPKKGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAG---SDEKVDLLKNKLGFDDAF  202 (338)
T ss_pred             HhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHHhcCCceeE
Confidence            3455677878888888899999999999999998655433   3567777777 8986544

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=85.70  E-value=19  Score=31.69  Aligned_cols=57  Identities=18%  Similarity=0.132  Sum_probs=37.1

Q ss_pred             CCCCCCChhhHHHHHHHHHHHHcCCCC-CCCeEEEeeCCCchHHH--HHHHHHHCCCcEEEEe
Q 028618           41 MMEPCSSVKDRIGYSMISDAEAKGLIT-PGESVLIEPTSGNTGIG--LAFMAAAKQYRLIITM  100 (206)
Q Consensus        41 ~~~ptGS~K~R~a~~~~~~a~~~g~~~-~~~~~vv~aSsGN~g~a--lA~~a~~~g~~~~ivv  100 (206)
                      +.+|.|.-  +.....+...+.+|... .++..+|+..++..|.|  +|.+. ..|..++++-
T Consensus        14 ~~hp~gc~--~~v~~qi~~~~~~~~~~~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~   73 (398)
T PRK13656         14 TAHPVGCE--ANVKEQIEYVKAQGPIANGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVF   73 (398)
T ss_pred             CCCCHHHH--HHHHHHHHHHHhcCCcCCCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEe
Confidence            44666643  34556777777888773 34567777777767777  55566 6788776664

>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein

Probab=85.04  E-value=5.3  Score=33.77  Aligned_cols=57  Identities=18%  Similarity=0.110  Sum_probs=41.2

Q ss_pred             HHcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEE
Q 028618           61 EAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVL  121 (206)
Q Consensus        61 ~~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~  121 (206)
                      .++..+++|++.+|.. .|..|.+++..|+.+|.+++++.+   ++.|++.++.+|++.+.
T Consensus       158 ~~~~~~~~g~~VlV~G-~g~iG~~a~~~a~~~G~~vi~~~~---~~~~~~~a~~~Ga~~vi  214 (329)
T TIGR02822       158 LLRASLPPGGRLGLYG-FGGSAHLTAQVALAQGATVHVMTR---GAAARRLALALGAASAG  214 (329)
T ss_pred             HHhcCCCCCCEEEEEc-CCHHHHHHHHHHHHCCCeEEEEeC---ChHHHHHHHHhCCceec
Confidence            3445577776666655 488899999999999987554422   45678889999997654

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=84.85  E-value=9.3  Score=30.74  Aligned_cols=55  Identities=16%  Similarity=0.181  Sum_probs=39.6

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCC
Q 028618           70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPA  125 (206)
Q Consensus        70 ~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~  125 (206)
                      +..+|+..++--|.++|......|.+++++-... .+...+.++..|.++..+..|
T Consensus         9 k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~-~~~~~~~~~~~~~~~~~~~~D   63 (251)
T PRK12481          9 KVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAE-APETQAQVEALGRKFHFITAD   63 (251)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEecCch-HHHHHHHHHHcCCeEEEEEeC
Confidence            4678999999999999999999999988764432 223344556678777655443

>PRK08589 short chain dehydrogenase; Validated

Probab=84.85  E-value=7  Score=31.89  Aligned_cols=56  Identities=14%  Similarity=0.035  Sum_probs=38.7

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCC
Q 028618           70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPA  125 (206)
Q Consensus        70 ~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~  125 (206)
                      +..+|+..+|--|.++|......|.+++++-.........+.++..+.++..+..|
T Consensus         7 k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~D   62 (272)
T PRK08589          7 KVAVITGASTGIGQASAIALAQEGAYVLAVDIAEAVSETVDKIKSNGGKAKAYHVD   62 (272)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHhcCCeEEEEEee
Confidence            46788888899999999999999998888765521222344555667666555443

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=84.78  E-value=13  Score=31.92  Aligned_cols=58  Identities=19%  Similarity=0.343  Sum_probs=40.9

Q ss_pred             HcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEe
Q 028618           62 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLT  122 (206)
Q Consensus        62 ~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~  122 (206)
                      +...+++++..+|.+ +|..|..++..|+.+|.+.++++  +.++.+++.++.+|++.++.
T Consensus       185 ~~~~i~~g~~VlV~G-~G~vG~~a~~lak~~G~~~Vi~~--~~~~~r~~~a~~~Ga~~~i~  242 (371)
T cd08281         185 NTAGVRPGQSVAVVG-LGGVGLSALLGAVAAGASQVVAV--DLNEDKLALARELGATATVN  242 (371)
T ss_pred             hccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCcEEEE--cCCHHHHHHHHHcCCceEeC
Confidence            445567776666654 68999999999999999533333  33556777888899865543

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>PRK05993 short chain dehydrogenase; Provisional

Probab=84.75  E-value=15  Score=29.99  Aligned_cols=53  Identities=28%  Similarity=0.202  Sum_probs=39.8

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCC
Q 028618           70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPA  125 (206)
Q Consensus        70 ~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~  125 (206)
                      +..+|+..+|..|.++|......|.+++++...   +.+.+.+...|.+++.++-.
T Consensus         5 k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~---~~~~~~l~~~~~~~~~~Dl~   57 (277)
T PRK05993          5 RSILITGCSSGIGAYCARALQSDGWRVFATCRK---EEDVAALEAEGLEAFQLDYA   57 (277)
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHCCceEEEccCC
Confidence            367888999999999999998999988777543   34455555667777766654

>PRK06182 short chain dehydrogenase; Validated

Probab=84.51  E-value=17  Score=29.43  Aligned_cols=53  Identities=19%  Similarity=0.183  Sum_probs=39.5

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCC
Q 028618           70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPA  125 (206)
Q Consensus        70 ~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~  125 (206)
                      +..+|+.++|--|.++|......|.+++++...   ..+++.+...+.+++.++-.
T Consensus         4 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~---~~~l~~~~~~~~~~~~~Dv~   56 (273)
T PRK06182          4 KVALVTGASSGIGKATARRLAAQGYTVYGAARR---VDKMEDLASLGVHPLSLDVT   56 (273)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHhCCCeEEEeeCC
Confidence            367888999999999999999999988877543   23444555567777777654

>cd08293 PTGR2 Prostaglandin reductase

Probab=84.49  E-value=16  Score=30.71  Aligned_cols=58  Identities=22%  Similarity=0.349  Sum_probs=39.9

Q ss_pred             cCCCCCC--CeEEEeeCCCchHHHHHHHHHHCCC-cEEEEeCCCCCHHHHHHHHH-cCCEEEEeC
Q 028618           63 KGLITPG--ESVLIEPTSGNTGIGLAFMAAAKQY-RLIITMPASMSLERRIILRA-FGAELVLTD  123 (206)
Q Consensus        63 ~g~~~~~--~~~vv~aSsGN~g~alA~~a~~~g~-~~~ivvp~~~~~~~~~~~~~-~Ga~v~~~~  123 (206)
                      .+.+.++  ++.+|.+.+|..|.++.-.|+.+|. ++++..+   ++.+.+.++. +|++-++..
T Consensus       147 ~~~~~~g~~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~---s~~~~~~~~~~lGa~~vi~~  208 (345)
T cd08293         147 KGHITPGANQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICG---SDEKCQLLKSELGFDAAINY  208 (345)
T ss_pred             hccCCCCCCCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcC---CHHHHHHHHHhcCCcEEEEC
Confidence            3445554  5667777779999999999999998 5655533   3466666655 888655443

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=84.41  E-value=19  Score=30.74  Aligned_cols=58  Identities=17%  Similarity=0.208  Sum_probs=42.9

Q ss_pred             HcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHH-HcCCEEEEe
Q 028618           62 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILR-AFGAELVLT  122 (206)
Q Consensus        62 ~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~-~~Ga~v~~~  122 (206)
                      +.+.+.+|+..+|.+.+|..|.++...|+.+|.++++..   .++.+.+.++ .+|++-+.-
T Consensus       152 ~~~~~~~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~---~~~~k~~~~~~~lGa~~vi~  210 (348)
T PLN03154        152 EVCSPKKGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSA---GSSQKVDLLKNKLGFDEAFN  210 (348)
T ss_pred             HhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEc---CCHHHHHHHHHhcCCCEEEE
Confidence            345567787777777789999999999999999855542   3456777776 799865554

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=84.36  E-value=10  Score=30.37  Aligned_cols=56  Identities=9%  Similarity=0.014  Sum_probs=40.9

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCC-HHHHHHHHHcCCEEEEeCCC
Q 028618           70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVLTDPA  125 (206)
Q Consensus        70 ~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~-~~~~~~~~~~Ga~v~~~~~~  125 (206)
                      +..+|+..+|..|.+++......|.+++++...... ....+.++..|.++..+..|
T Consensus         8 ~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D   64 (262)
T PRK13394          8 KTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMD   64 (262)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECC
Confidence            468999999999999999999999987776554321 23344556678887666554

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=84.34  E-value=11  Score=30.01  Aligned_cols=55  Identities=15%  Similarity=0.167  Sum_probs=39.7

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCC
Q 028618           70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPA  125 (206)
Q Consensus        70 ~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~  125 (206)
                      ++.+|+..+|.-|.++|......|.+++++.... .....+.++..+.++..+..|
T Consensus         6 k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~-~~~~~~~~~~~~~~~~~~~~D   60 (248)
T TIGR01832         6 KVALVTGANTGLGQGIAVGLAEAGADIVGAGRSE-PSETQQQVEALGRRFLSLTAD   60 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCch-HHHHHHHHHhcCCceEEEECC
Confidence            4678888889999999999999999877775432 233345556677766666544

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=84.26  E-value=14  Score=31.49  Aligned_cols=57  Identities=25%  Similarity=0.253  Sum_probs=40.5

Q ss_pred             HcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEE
Q 028618           62 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVL  121 (206)
Q Consensus        62 ~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~  121 (206)
                      +.+.+.++++.+|. .+|-.|.+++..|+.+|.+.++.+  +.++.+++.++.+|++-++
T Consensus       170 ~~~~~~~g~~VlV~-G~g~vG~~a~~~ak~~G~~~Vi~~--~~~~~~~~~~~~~Ga~~~i  226 (358)
T TIGR03451       170 NTGGVKRGDSVAVI-GCGGVGDAAIAGAALAGASKIIAV--DIDDRKLEWAREFGATHTV  226 (358)
T ss_pred             hccCCCCCCEEEEE-CCCHHHHHHHHHHHHcCCCeEEEE--cCCHHHHHHHHHcCCceEE
Confidence            44556777666666 468899999999999999744444  2245677777888886444

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=84.19  E-value=15  Score=29.53  Aligned_cols=31  Identities=26%  Similarity=0.336  Sum_probs=25.2

Q ss_pred             eEEEeeCCCchHHHHHHHHHHCCCcEEEEeC
Q 028618           71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMP  101 (206)
Q Consensus        71 ~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp  101 (206)
                      +.+|+.++|.-|.++|......|.++++.-.
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r   32 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGARVVISSR   32 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeC
Confidence            4688899999999999999888987666543

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=84.18  E-value=18  Score=30.48  Aligned_cols=58  Identities=26%  Similarity=0.342  Sum_probs=40.5

Q ss_pred             HcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEe
Q 028618           62 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLT  122 (206)
Q Consensus        62 ~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~  122 (206)
                      +...+.+++..+|.+ +|..|.+++..|+.+|++.++++  ..++.+.+.++.+|++.++.
T Consensus       166 ~~~~~~~g~~vlI~g-~g~vG~~a~q~a~~~G~~~v~~~--~~~~~~~~~~~~~ga~~~i~  223 (351)
T cd08233         166 RRSGFKPGDTALVLG-AGPIGLLTILALKAAGASKIIVS--EPSEARRELAEELGATIVLD  223 (351)
T ss_pred             HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEE--CCCHHHHHHHHHhCCCEEEC
Confidence            444566776666665 68999999999999999544444  23556677777788876554

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family

Probab=84.09  E-value=19  Score=30.34  Aligned_cols=59  Identities=27%  Similarity=0.405  Sum_probs=42.9

Q ss_pred             HcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeC
Q 028618           62 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTD  123 (206)
Q Consensus        62 ~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~  123 (206)
                      +...+.+++..+| ...|..|.+++..|+.+|.+.++.+..  ++.+.+.++.+|++.++..
T Consensus       168 ~~~~~~~g~~vlI-~g~g~vG~~~~~~a~~~G~~~v~~~~~--~~~~~~~~~~~g~~~v~~~  226 (350)
T cd08256         168 DRANIKFDDVVVL-AGAGPLGLGMIGAARLKNPKKLIVLDL--KDERLALARKFGADVVLNP  226 (350)
T ss_pred             HhcCCCCCCEEEE-ECCCHHHHHHHHHHHHcCCcEEEEEcC--CHHHHHHHHHcCCcEEecC
Confidence            4555677766556 666999999999999999886666544  3566777788898665433

This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,

>PRK12743 oxidoreductase; Provisional

Probab=84.04  E-value=7.5  Score=31.26  Aligned_cols=55  Identities=15%  Similarity=0.212  Sum_probs=40.1

Q ss_pred             eEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCC--HHHHHHHHHcCCEEEEeCCC
Q 028618           71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS--LERRIILRAFGAELVLTDPA  125 (206)
Q Consensus        71 ~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~--~~~~~~~~~~Ga~v~~~~~~  125 (206)
                      +.+|+..+|.-|.++|......|.+++++...+..  ....+.++..|.++..+..|
T Consensus         4 ~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   60 (256)
T PRK12743          4 VAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLD   60 (256)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEcc
Confidence            67888999999999999999999988777544322  22245566778777766544

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=83.94  E-value=9.7  Score=28.14  Aligned_cols=56  Identities=29%  Similarity=0.260  Sum_probs=40.9

Q ss_pred             eEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCC----HHHHHHHHHcCCEEEEeCCCC
Q 028618           71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS----LERRIILRAFGAELVLTDPAK  126 (206)
Q Consensus        71 ~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~----~~~~~~~~~~Ga~v~~~~~~~  126 (206)
                      ..+|+..++.-|+++|......|-..++++..+..    ...+..++..|.++..+..|-
T Consensus         2 ~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~   61 (167)
T PF00106_consen    2 TVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDL   61 (167)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESET
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCceEEEEeeecccccccccccccccccccccccccccc
Confidence            46888999999999999998887766666655522    223445677889888887553

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK07062 short chain dehydrogenase; Provisional

Probab=83.74  E-value=19  Score=28.89  Aligned_cols=33  Identities=9%  Similarity=0.055  Sum_probs=27.3

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCC
Q 028618           70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPA  102 (206)
Q Consensus        70 ~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~  102 (206)
                      +..+|+..+|.-|.++|......|.+++++...
T Consensus         9 k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~   41 (265)
T PRK07062          9 RVAVVTGGSSGIGLATVELLLEAGASVAICGRD   41 (265)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence            467888999999999999998899987766554

>PRK08226 short chain dehydrogenase; Provisional

Probab=83.55  E-value=9.5  Score=30.65  Aligned_cols=56  Identities=18%  Similarity=0.051  Sum_probs=37.9

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCC
Q 028618           70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPA  125 (206)
Q Consensus        70 ~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~  125 (206)
                      ++.+|+..+|.-|.++|......|.+++++-.........+.+...|.++..+..|
T Consensus         7 ~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D   62 (263)
T PRK08226          7 KTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVAD   62 (263)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhCCceEEEECC
Confidence            36788899999999999999999998777654432122233344456666555444

>PRK06139 short chain dehydrogenase; Provisional

Probab=83.45  E-value=7.1  Score=33.23  Aligned_cols=56  Identities=23%  Similarity=0.227  Sum_probs=39.6

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCC-HHHHHHHHHcCCEEEEeCCC
Q 028618           70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVLTDPA  125 (206)
Q Consensus        70 ~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~-~~~~~~~~~~Ga~v~~~~~~  125 (206)
                      +..+|+..+|--|.++|......|.+++++...... ....+.++..|+++..+..|
T Consensus         8 k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~D   64 (330)
T PRK06139          8 AVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTD   64 (330)
T ss_pred             CEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEee
Confidence            467888888999999999999999997776543221 22234566788887655443

>PRK07109 short chain dehydrogenase; Provisional

Probab=83.44  E-value=7.9  Score=32.92  Aligned_cols=56  Identities=18%  Similarity=0.151  Sum_probs=40.4

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCC-HHHHHHHHHcCCEEEEeCCC
Q 028618           70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVLTDPA  125 (206)
Q Consensus        70 ~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~-~~~~~~~~~~Ga~v~~~~~~  125 (206)
                      +..+|+..+|--|.++|......|.+++++...... ....+.++..|+++..+..|
T Consensus         9 k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~D   65 (334)
T PRK07109          9 QVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVAD   65 (334)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEec
Confidence            367888889999999999999999988777654221 22344566778888766554

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=83.42  E-value=15  Score=29.40  Aligned_cols=55  Identities=13%  Similarity=0.104  Sum_probs=39.9

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCC
Q 028618           70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPA  125 (206)
Q Consensus        70 ~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~  125 (206)
                      +..+|+..+|.-|.++|......|.+++++-. .......+.++..+.++..+..|
T Consensus        11 k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~-~~~~~~~~~~~~~~~~~~~~~~D   65 (253)
T PRK08993         11 KVAVVTGCDTGLGQGMALGLAEAGCDIVGINI-VEPTETIEQVTALGRRFLSLTAD   65 (253)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEecC-cchHHHHHHHHhcCCeEEEEECC
Confidence            36899999999999999999999998776532 22344455566677777666544

>PRK05854 short chain dehydrogenase; Provisional

Probab=83.39  E-value=17  Score=30.51  Aligned_cols=33  Identities=24%  Similarity=0.338  Sum_probs=25.6

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCC
Q 028618           70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPA  102 (206)
Q Consensus        70 ~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~  102 (206)
                      +..+|+..++--|.++|....+.|.++++....
T Consensus        15 k~~lITGas~GIG~~~a~~La~~G~~Vil~~R~   47 (313)
T PRK05854         15 KRAVVTGASDGLGLGLARRLAAAGAEVILPVRN   47 (313)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence            367888888888888888888888877766543

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=83.11  E-value=13  Score=30.86  Aligned_cols=50  Identities=20%  Similarity=0.282  Sum_probs=35.3

Q ss_pred             CCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEE
Q 028618           69 GESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVL  121 (206)
Q Consensus        69 ~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~  121 (206)
                      +++.+|...+|..|.+++..|+.+|.++++....   +.+.+.++.+|++-+.
T Consensus       147 ~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~---~~~~~~~~~~g~~~v~  196 (326)
T cd08289         147 QGPVLVTGATGGVGSLAVSILAKLGYEVVASTGK---ADAADYLKKLGAKEVI  196 (326)
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecC---HHHHHHHHHcCCCEEE
Confidence            3456666677999999999999999986555332   3456666777774443

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>PRK06114 short chain dehydrogenase; Provisional

Probab=82.77  E-value=16  Score=29.30  Aligned_cols=56  Identities=11%  Similarity=0.058  Sum_probs=39.4

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCC--HHHHHHHHHcCCEEEEeCCC
Q 028618           70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS--LERRIILRAFGAELVLTDPA  125 (206)
Q Consensus        70 ~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~--~~~~~~~~~~Ga~v~~~~~~  125 (206)
                      +..+|+..+|--|.++|......|.++++.......  ....+.++..|.++..+..|
T Consensus         9 k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D   66 (254)
T PRK06114          9 QVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAAD   66 (254)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcC
Confidence            467888888999999999999999988877654322  22344556667666655544

>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]

Probab=82.69  E-value=8.8  Score=25.12  Aligned_cols=49  Identities=20%  Similarity=0.088  Sum_probs=36.6

Q ss_pred             EEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCC-----H----HHHHHHHHcCCEEEE
Q 028618           73 LIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-----L----ERRIILRAFGAELVL  121 (206)
Q Consensus        73 vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~-----~----~~~~~~~~~Ga~v~~  121 (206)
                      ++.-.+|..|.-+|.+.+.+|.+++++.+....     +    .-.+.++..|.+++.
T Consensus         2 vvViGgG~ig~E~A~~l~~~g~~vtli~~~~~~~~~~~~~~~~~~~~~l~~~gV~v~~   59 (80)
T PF00070_consen    2 VVVIGGGFIGIELAEALAELGKEVTLIERSDRLLPGFDPDAAKILEEYLRKRGVEVHT   59 (80)
T ss_dssp             EEEESSSHHHHHHHHHHHHTTSEEEEEESSSSSSTTSSHHHHHHHHHHHHHTTEEEEE
T ss_pred             EEEECcCHHHHHHHHHHHHhCcEEEEEeccchhhhhcCHHHHHHHHHHHHHCCCEEEe
Confidence            567789999999999999999999999876431     1    223456667766654

Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=82.67  E-value=15  Score=30.32  Aligned_cols=56  Identities=25%  Similarity=0.280  Sum_probs=38.4

Q ss_pred             HcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEE
Q 028618           62 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV  120 (206)
Q Consensus        62 ~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~  120 (206)
                      +...+.++...+|...+|..|.+++..|+.+|.+++++....   .+.+.++.+|++-+
T Consensus       133 ~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~---~~~~~~~~~g~~~~  188 (324)
T cd08292         133 DFLGVKPGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRD---AGVAELRALGIGPV  188 (324)
T ss_pred             HhhCCCCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCH---HHHHHHHhcCCCEE
Confidence            345566776666767779999999999999999877665432   33444445566433

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=82.58  E-value=13  Score=31.58  Aligned_cols=59  Identities=20%  Similarity=0.263  Sum_probs=47.0

Q ss_pred             HHcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHH-cCCEEEEe
Q 028618           61 EAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRA-FGAELVLT  122 (206)
Q Consensus        61 ~~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~-~Ga~v~~~  122 (206)
                      .+-|..++|++.+|++.+|--|.-+.-.|+..|++++.+.-.   ++|.+.++. +|-+...-
T Consensus       143 l~igqpk~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg---~eK~~~l~~~lGfD~~id  202 (340)
T COG2130         143 LDIGQPKAGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGG---AEKCDFLTEELGFDAGID  202 (340)
T ss_pred             HHhcCCCCCCEEEEEecccccchHHHHHHHhhCCeEEEecCC---HHHHHHHHHhcCCceeee
Confidence            455667778899999999999999999999999999988644   477777776 77665543

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=82.57  E-value=18  Score=30.31  Aligned_cols=54  Identities=24%  Similarity=0.263  Sum_probs=38.9

Q ss_pred             CCCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEE
Q 028618           65 LITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVL  121 (206)
Q Consensus        65 ~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~  121 (206)
                      .+.+++..+|.+.+|..|.+++..|+.+|.++++..+.   +.+.+.++.+|++-+.
T Consensus       162 ~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~---~~~~~~~~~~g~~~v~  215 (341)
T cd08297         162 GLKPGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVG---DEKLELAKELGADAFV  215 (341)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC---HHHHHHHHHcCCcEEE
Confidence            45666677777777889999999999999987666433   3555666677765443

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>PRK06720 hypothetical protein; Provisional

Probab=82.53  E-value=20  Score=27.44  Aligned_cols=32  Identities=16%  Similarity=0.181  Sum_probs=24.7

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHCCCcEEEEeC
Q 028618           70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMP  101 (206)
Q Consensus        70 ~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp  101 (206)
                      +..+|+..++--|.++|......|.++++.-.
T Consensus        17 k~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r   48 (169)
T PRK06720         17 KVAIVTGGGIGIGRNTALLLAKQGAKVIVTDI   48 (169)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEEC
Confidence            36778888888899999888888887666543

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=82.50  E-value=14  Score=31.19  Aligned_cols=54  Identities=17%  Similarity=0.191  Sum_probs=39.0

Q ss_pred             CCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEe
Q 028618           66 ITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLT  122 (206)
Q Consensus        66 ~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~  122 (206)
                      ..++++.+|.+ +|..|++....|+.+|.+.++++.  .++.+++..+.+|++.+..
T Consensus       167 ~~~g~~VlV~G-~G~vG~~aiqlak~~G~~~Vi~~~--~~~~~~~~a~~lGa~~vi~  220 (343)
T PRK09880        167 DLQGKRVFVSG-VGPIGCLIVAAVKTLGAAEIVCAD--VSPRSLSLAREMGADKLVN  220 (343)
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEEe--CCHHHHHHHHHcCCcEEec
Confidence            44565666654 699999999999999986444432  3467788889999976543

>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD)

Probab=82.49  E-value=18  Score=30.28  Aligned_cols=53  Identities=21%  Similarity=0.262  Sum_probs=38.8

Q ss_pred             CCCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEE
Q 028618           65 LITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVL  121 (206)
Q Consensus        65 ~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~  121 (206)
                      .+.+++..+|.. +|..|.+++..|+.+|.+++++.+   .+.+++.++.+|++-++
T Consensus       160 ~~~~~~~vlV~g-~g~iG~~~~~~a~~~G~~vi~~~~---~~~~~~~~~~~g~~~~i  212 (333)
T cd08296         160 GAKPGDLVAVQG-IGGLGHLAVQYAAKMGFRTVAISR---GSDKADLARKLGAHHYI  212 (333)
T ss_pred             CCCCCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEeC---ChHHHHHHHHcCCcEEe
Confidence            456666666666 899999999999999998655533   34567777888885544

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal

>COG0800 Eda 2-keto-3-deoxy-6-phosphogluconate aldolase [Carbohydrate transport and metabolism]

Probab=82.48  E-value=24  Score=28.34  Aligned_cols=122  Identities=10%  Similarity=0.043  Sum_probs=73.9

Q ss_pred             HHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHH
Q 028618           53 GYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAV  132 (206)
Q Consensus        53 a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~  132 (206)
                      +.-++..+.+-|.    +..=|+.++--...+....++.+. ++.|=.=.-.++...++....||+.++.|+-.  .+  
T Consensus        27 a~~~a~Ali~gGi----~~IEITl~sp~a~e~I~~l~~~~p-~~lIGAGTVL~~~q~~~a~~aGa~fiVsP~~~--~e--   97 (211)
T COG0800          27 ALPLAKALIEGGI----PAIEITLRTPAALEAIRALAKEFP-EALIGAGTVLNPEQARQAIAAGAQFIVSPGLN--PE--   97 (211)
T ss_pred             HHHHHHHHHHcCC----CeEEEecCCCCHHHHHHHHHHhCc-ccEEccccccCHHHHHHHHHcCCCEEECCCCC--HH--
Confidence            4445555566665    123355677777888888888888 54443333357888999999999999998752  23  


Q ss_pred             HHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHHHHHHh--------------hhC-CCCCEEEEccCcch
Q 028618          133 QKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWK--------------GSG-GRIDALVSGIGTGG  187 (206)
Q Consensus       133 ~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~--------------q~~-~~~d~vv~~vG~Gg  187 (206)
                        ..+.+.++ +..+++...+|.-.+. -...|.++++              -+. +-++.-|+|+|+=+
T Consensus        98 --v~~~a~~~-~ip~~PG~~TptEi~~-Ale~G~~~lK~FPa~~~Gg~~~~ka~~gP~~~v~~~pTGGVs  163 (211)
T COG0800          98 --VAKAANRY-GIPYIPGVATPTEIMA-ALELGASALKFFPAEVVGGPAMLKALAGPFPQVRFCPTGGVS  163 (211)
T ss_pred             --HHHHHHhC-CCcccCCCCCHHHHHH-HHHcChhheeecCccccCcHHHHHHHcCCCCCCeEeecCCCC
Confidence              33345555 6777777666654222 2223333332              221 23677788887543

>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]

Probab=82.36  E-value=25  Score=30.20  Aligned_cols=85  Identities=14%  Similarity=0.237  Sum_probs=54.7

Q ss_pred             eEEEeeCCCchHHHHHHHHHHC-CCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChH-HHHHHHHHHHHhCCCeEEc
Q 028618           71 SVLIEPTSGNTGIGLAFMAAAK-QYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMK-GAVQKAEEILAKTPNAYML  148 (206)
Q Consensus        71 ~~vv~aSsGN~g~alA~~a~~~-g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~-~~~~~a~~~~~~~~~~~~~  148 (206)
                      .+++.+++|..|.-.|..=-.. |=++.++.-..-...-.+..+.+|++|..++.+.+-. .-.....++++..++.+|+
T Consensus        69 ~tf~isgsGh~g~E~al~N~lePgd~vLv~~~G~wg~ra~D~~~r~ga~V~~v~~~~G~~~~le~i~~~lsqh~p~~vfv  148 (385)
T KOG2862|consen   69 QTFVISGSGHSGWEAALVNLLEPGDNVLVVSTGTWGQRAADCARRYGAEVDVVEADIGQAVPLEEITEKLSQHKPKAVFV  148 (385)
T ss_pred             ceEEEecCCcchHHHHHHhhcCCCCeEEEEEechHHHHHHHHHHhhCceeeEEecCcccCccHHHHHHHHHhcCCceEEE
Confidence            6788888888876655443333 4333333333345556777899999999997764311 2244456677778899998


Q ss_pred             CCCCCCc
Q 028618          149 QQFENPA  155 (206)
Q Consensus       149 ~~~~~~~  155 (206)
                      -+.+..-
T Consensus       149 ~hgdsST  155 (385)
T KOG2862|consen  149 THGDSST  155 (385)
T ss_pred             EecCccc
Confidence            8766543

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=82.12  E-value=11  Score=32.72  Aligned_cols=56  Identities=29%  Similarity=0.341  Sum_probs=42.4

Q ss_pred             CCCCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEe
Q 028618           64 GLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLT  122 (206)
Q Consensus        64 g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~  122 (206)
                      ..+.+++..+|...+|..|.+++..|+.+|.+.+++.   .+..+.+.++.+|+..+.-
T Consensus       185 ~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~---~~~~~~~~~~~~g~~~~v~  240 (398)
T TIGR01751       185 ATVKPGDNVLIWGAAGGLGSYATQLARAGGGNPVAVV---SSPEKAEYCRELGAEAVID  240 (398)
T ss_pred             cCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEc---CCHHHHHHHHHcCCCEEec
Confidence            4456666777777789999999999999999865553   3456778888899876553

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>PRK12937 short chain dehydrogenase; Provisional

Probab=81.93  E-value=16  Score=28.86  Aligned_cols=56  Identities=16%  Similarity=0.195  Sum_probs=40.7

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCC--HHHHHHHHHcCCEEEEeCCC
Q 028618           70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS--LERRIILRAFGAELVLTDPA  125 (206)
Q Consensus        70 ~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~--~~~~~~~~~~Ga~v~~~~~~  125 (206)
                      +..+|+..+|..|.++|......|.+++++.....+  ....+.++..+.++..+..+
T Consensus         6 ~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   63 (245)
T PRK12937          6 KVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQAD   63 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECC
Confidence            367888999999999999999999988776544322  22344556678887777654

>PF00185 OTCace: Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; InterPro: IPR006131 This family contains two related enzymes: Aspartate carbamoyltransferase (2

Probab=81.72  E-value=7.2  Score=29.58  Aligned_cols=46  Identities=15%  Similarity=0.175  Sum_probs=36.2

Q ss_pred             CCchHHHHHHHHHHCCCcEEEEeCCC--CCH--HHH----HHHHHcCCEEEEeC
Q 028618           78 SGNTGIGLAFMAAAKQYRLIITMPAS--MSL--ERR----IILRAFGAELVLTD  123 (206)
Q Consensus        78 sGN~g~alA~~a~~~g~~~~ivvp~~--~~~--~~~----~~~~~~Ga~v~~~~  123 (206)
                      -+|.++|++..++++|+.++++.|+.  .++  ..+    +..+..|.++...+
T Consensus        12 ~~rv~~Sl~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~   65 (158)
T PF00185_consen   12 HNRVAHSLIELLAKFGMEVVLIAPEGLRYPPDPEVLEKAKKNAKKNGGKITITD   65 (158)
T ss_dssp             TSHHHHHHHHHHHHTTSEEEEESSGGGGGSHHHHHHHHHHHHHHHHTTEEEEES
T ss_pred             CChHHHHHHHHHHHcCCEEEEECCCcccCCCCHHHHHHHHHHHHHhCCCeEEEe
Confidence            38999999999999999999999998  455  233    33455688888883

1.3.2 from EC) (ATCase) catalyzes the conversion of aspartate and carbamoyl phosphate to carbamoylaspartate, the second step in the de novo biosynthesis of pyrimidine nucleotides []. In prokaryotes ATCase consists of two subunits: a catalytic chain (gene pyrB) and a regulatory chain (gene pyrI), while in eukaryotes it is a domain in a multi- functional enzyme (called URA2 in yeast, rudimentary in Drosophila, and CAD in mammals []) that also catalyzes other steps of the biosynthesis of pyrimidines. Ornithine carbamoyltransferase (2.1.3.3 from EC) (OTCase) catalyzes the conversion of ornithine and carbamoyl phosphate to citrulline. In mammals this enzyme participates in the urea cycle [] and is located in the mitochondrial matrix. In prokaryotes and eukaryotic microorganisms it is involved in the biosynthesis of arginine. In some bacterial species it is also involved in the degradation of arginine [] (the arginine deaminase pathway). It has been shown [] that these two enzymes are evolutionary related. The predicted secondary structure of both enzymes are similar and there are some regions of sequence similarities. One of these regions includes three residues which have been shown, by crystallographic studies [], to be implicated in binding the phosphoryl group of carbamoyl phosphate and is described by IPR006132 from INTERPRO. The carboxyl-terminal, aspartate/ornithine-binding domain is connected to the amino-terminal domain by two alpha-helices, which comprise a hinge between domains [].; GO: 0016597 amino acid binding, 0016743 carboxyl- or carbamoyltransferase activity, 0006520 cellular amino acid metabolic process; PDB: 1ML4_A 4EP1_B 3Q98_A 3E2P_A 2RGW_E 4EKN_B 2G7M_E 3D6N_B 3M4J_A 3L06_A ....

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=81.55  E-value=30  Score=28.95  Aligned_cols=57  Identities=26%  Similarity=0.373  Sum_probs=40.1

Q ss_pred             HcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCCc-EEEEeCCCCCHHHHHHHHHcCCEEEEe
Q 028618           62 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYR-LIITMPASMSLERRIILRAFGAELVLT  122 (206)
Q Consensus        62 ~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~-~~ivvp~~~~~~~~~~~~~~Ga~v~~~  122 (206)
                      ++..+.+|++.+|.+ +|..|.+++..|+.+|.+ ++++   +.++.+++.++.+|++.++.
T Consensus       157 ~~~~~~~g~~vlV~G-~G~vG~~~~~~ak~~G~~~vi~~---~~~~~~~~~~~~~ga~~~i~  214 (339)
T cd08239         157 RRVGVSGRDTVLVVG-AGPVGLGALMLARALGAEDVIGV---DPSPERLELAKALGADFVIN  214 (339)
T ss_pred             HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEE---CCCHHHHHHHHHhCCCEEEc
Confidence            334456676666664 689999999999999998 4443   23456777778899865543

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>PF09837 DUF2064: Uncharacterized protein conserved in bacteria (DUF2064); InterPro: IPR018641 This entry contains proteins that have no known function

Probab=81.25  E-value=18  Score=26.19  Aligned_cols=97  Identities=14%  Similarity=0.128  Sum_probs=51.9

Q ss_pred             HHHHHHHCCCcEEEEeCCC-CCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHh
Q 028618           85 LAFMAAAKQYRLIITMPAS-MSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYET  163 (206)
Q Consensus        85 lA~~a~~~g~~~~ivvp~~-~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t  163 (206)
                      |+...+..+.+..++.... ............+.+++.-.+.. +-+++..|.+.+.+......+-..|.|.... .+  
T Consensus         2 l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~Q~g~d-LG~Rm~~a~~~~~~g~~~vvliGsD~P~l~~-~~--   77 (122)
T PF09837_consen    2 LAALAQADGADVVLAYTPDGDHAAFRQLWLPSGFSFFPQQGGD-LGERMANAFQQAARGYEPVVLIGSDCPDLTP-DD--   77 (122)
T ss_dssp             ------TSSSEEEEEE----TTHHHHHHHH-TTSEEEE--SSS-HHHHHHHHHHHHHTT-SEEEEE-SS-TT--H-HH--
T ss_pred             ccccccCCCcCEEEEEcCCccHHHHhccccCCCCEEeecCCCC-HHHHHHHHHHHHHcCCCcEEEEcCCCCCCCH-HH--
Confidence            3455667788888887554 44443333556677777665543 7888888887774443456666778888743 22  


Q ss_pred             HHHHHHhhhCCCCCEEEEccCcch
Q 028618          164 TGPELWKGSGGRIDALVSGIGTGG  187 (206)
Q Consensus       164 ~~~Ei~~q~~~~~d~vv~~vG~Gg  187 (206)
                       -.+.++.+ .+.|.|+.|+--||
T Consensus        78 -l~~A~~~L-~~~d~VlgPa~DGG   99 (122)
T PF09837_consen   78 -LEQAFEAL-QRHDVVLGPAEDGG   99 (122)
T ss_dssp             -HHHHHHHT-TT-SEEEEEBTTSS
T ss_pred             -HHHHHHHh-ccCCEEEeeccCCC
Confidence             23444555 34599999998776

; PDB: 3CGX_A.

>PRK12828 short chain dehydrogenase; Provisional

Probab=81.24  E-value=19  Score=28.07  Aligned_cols=56  Identities=18%  Similarity=0.017  Sum_probs=40.3

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCC-HHHHHHHHHcCCEEEEeCCC
Q 028618           70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVLTDPA  125 (206)
Q Consensus        70 ~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~-~~~~~~~~~~Ga~v~~~~~~  125 (206)
                      ++.+|+.++|--|.+++....+.|.+++++.....+ ......+...+.+++..+-.
T Consensus         8 k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~   64 (239)
T PRK12828          8 KVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLV   64 (239)
T ss_pred             CEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecC
Confidence            478899999999999999998889997777654322 12234455667777776654

>PRK14030 glutamate dehydrogenase; Provisional

Probab=81.22  E-value=11  Score=33.66  Aligned_cols=60  Identities=15%  Similarity=0.055  Sum_probs=45.7

Q ss_pred             hhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEE--------EeCCCCCHHH
Q 028618           49 KDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLII--------TMPASMSLER  108 (206)
Q Consensus        49 K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~i--------vvp~~~~~~~  108 (206)
                      --||..+.+..+.+..-......+++....||-|..+|.....+|.+++.        +-|+.....+
T Consensus       207 Tg~Gv~~~~~~~~~~~g~~l~g~~vaIQGfGnVG~~aA~~L~e~GakvVavSD~~G~i~d~~Gld~~~  274 (445)
T PRK14030        207 TGFGALYFVHQMLETKGIDIKGKTVAISGFGNVAWGAATKATELGAKVVTISGPDGYIYDPDGISGEK  274 (445)
T ss_pred             cHHHHHHHHHHHHHHcCCCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEcCCceEECCCCCCHHH
Confidence            45788888877654332344457889899999999999999999999999        5566666655

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=81.18  E-value=27  Score=28.06  Aligned_cols=77  Identities=16%  Similarity=0.088  Sum_probs=49.5

Q ss_pred             EEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHH-------------HHHHcCCEEEEeCCCCChHHHHHHHHHH
Q 028618           72 VLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRI-------------ILRAFGAELVLTDPAKGMKGAVQKAEEI  138 (206)
Q Consensus        72 ~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~-------------~~~~~Ga~v~~~~~~~~~~~~~~~a~~~  138 (206)
                      ++....+||.|.++|..-...|.++++--..........             ....-+++|+++.-.  |........++
T Consensus         3 ~~~i~GtGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~~~i~~~~~~dA~~~aDVVvLAVP--~~a~~~v~~~l   80 (211)
T COG2085           3 IIAIIGTGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAALGPLITGGSNEDAAALADVVVLAVP--FEAIPDVLAEL   80 (211)
T ss_pred             EEEEeccChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhccccccCChHHHHhcCCEEEEecc--HHHHHhHHHHH
Confidence            466678999999999999999998888755543211111             112344677777665  55555666666


Q ss_pred             HHhCCCeEEcCC
Q 028618          139 LAKTPNAYMLQQ  150 (206)
Q Consensus       139 ~~~~~~~~~~~~  150 (206)
                      ....++...++.
T Consensus        81 ~~~~~~KIvID~   92 (211)
T COG2085          81 RDALGGKIVIDA   92 (211)
T ss_pred             HHHhCCeEEEec
Confidence            655545666654

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=80.98  E-value=8.3  Score=30.73  Aligned_cols=49  Identities=20%  Similarity=0.236  Sum_probs=26.3

Q ss_pred             CCCchHHHHHHHHHHCCCcEEEEeCCCCC--HHHHHHHHHcCCEEEEeCCC
Q 028618           77 TSGNTGIGLAFMAAAKQYRLIITMPASMS--LERRIILRAFGAELVLTDPA  125 (206)
Q Consensus        77 SsGN~g~alA~~a~~~g~~~~ivvp~~~~--~~~~~~~~~~Ga~v~~~~~~  125 (206)
                      +++.-|.++|....+.|.++++.-.....  ....+..+.+|.+++.++-.
T Consensus         4 ~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~~   54 (241)
T PF13561_consen    4 SSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGAEVIQCDLS   54 (241)
T ss_dssp             STSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSEEEESCTT
T ss_pred             CCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCceEeecCc
Confidence            44566777777777777666666444321  11223334566665555543

...

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=80.96  E-value=13  Score=29.66  Aligned_cols=56  Identities=16%  Similarity=0.055  Sum_probs=38.3

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCC-HHHHHHHHHcCCEEEEeCCC
Q 028618           70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVLTDPA  125 (206)
Q Consensus        70 ~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~-~~~~~~~~~~Ga~v~~~~~~  125 (206)
                      ++.+|+..+|..|.++|......|.+++++...... ....+.++..|.++..+..|
T Consensus        11 k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D   67 (255)
T PRK07523         11 RRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFD   67 (255)
T ss_pred             CEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEcc
Confidence            478888999999999999999899987665433211 12233455567777766544

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=80.90  E-value=18  Score=28.41  Aligned_cols=56  Identities=18%  Similarity=0.169  Sum_probs=39.5

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCC--HHHHHHHHHcCCEEEEeCCC
Q 028618           70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS--LERRIILRAFGAELVLTDPA  125 (206)
Q Consensus        70 ~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~--~~~~~~~~~~Ga~v~~~~~~  125 (206)
                      ++.+|+..+|..|.+++......|.+++++.....+  ....+.++..+.++..+..+
T Consensus         6 ~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   63 (248)
T PRK05557          6 KVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGD   63 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcC
Confidence            367888999999999999998899987666654322  12233455567787777554

>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like

Probab=80.71  E-value=28  Score=29.19  Aligned_cols=56  Identities=25%  Similarity=0.418  Sum_probs=39.6

Q ss_pred             cCCCCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEE
Q 028618           63 KGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVL  121 (206)
Q Consensus        63 ~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~  121 (206)
                      ...+.+++..+| ..+|..|.+++..|+..|++.++.+...  +.+.+.++.+|++-++
T Consensus       163 ~~~~~~g~~vlI-~g~g~vg~~~~~lak~~G~~~v~~~~~~--~~~~~~~~~~ga~~v~  218 (345)
T cd08287         163 SAGVRPGSTVVV-VGDGAVGLCAVLAAKRLGAERIIAMSRH--EDRQALAREFGATDIV  218 (345)
T ss_pred             hcCCCCCCEEEE-ECCCHHHHHHHHHHHHcCCCEEEEECCC--HHHHHHHHHcCCceEe
Confidence            344566656666 4589999999999999999865555433  4566777888885444

This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=80.66  E-value=13  Score=29.18  Aligned_cols=34  Identities=21%  Similarity=0.238  Sum_probs=29.2

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCC
Q 028618           70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPAS  103 (206)
Q Consensus        70 ~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~  103 (206)
                      ++.+|+..+|..|.+++......|.+++++....
T Consensus         6 ~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~   39 (238)
T PRK05786          6 KKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNE   39 (238)
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCH
Confidence            3678999999999999999999999988876643

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=80.56  E-value=12  Score=32.34  Aligned_cols=61  Identities=23%  Similarity=0.241  Sum_probs=46.8

Q ss_pred             HHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCC
Q 028618           60 AEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDP  124 (206)
Q Consensus        60 a~~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~  124 (206)
                      +.++..+.||+. +.....|-.|.-..-+|+.+|.+++++   +.++.|++..+.+||+.+....
T Consensus       158 alk~~~~~pG~~-V~I~G~GGlGh~avQ~Aka~ga~Via~---~~~~~K~e~a~~lGAd~~i~~~  218 (339)
T COG1064         158 ALKKANVKPGKW-VAVVGAGGLGHMAVQYAKAMGAEVIAI---TRSEEKLELAKKLGADHVINSS  218 (339)
T ss_pred             ehhhcCCCCCCE-EEEECCcHHHHHHHHHHHHcCCeEEEE---eCChHHHHHHHHhCCcEEEEcC
Confidence            445556788854 555666677777778888899888888   5677899999999999998865

>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate

Probab=80.52  E-value=3.9  Score=30.80  Aligned_cols=41  Identities=17%  Similarity=0.083  Sum_probs=32.6

Q ss_pred             EEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcC
Q 028618           73 LIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFG  116 (206)
Q Consensus        73 vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~G  116 (206)
                      |....+||.|.|+|...+..|.+++++.++.   ...+.++..+
T Consensus         2 I~ViGaG~~G~AlA~~la~~g~~V~l~~~~~---~~~~~i~~~~   42 (157)
T PF01210_consen    2 IAVIGAGNWGTALAALLADNGHEVTLWGRDE---EQIEEINETR   42 (157)
T ss_dssp             EEEESSSHHHHHHHHHHHHCTEEEEEETSCH---HHHHHHHHHT
T ss_pred             EEEECcCHHHHHHHHHHHHcCCEEEEEeccH---HHHHHHHHhC
Confidence            5667899999999999999999999997764   4555555443

This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=80.13  E-value=15  Score=29.70  Aligned_cols=56  Identities=16%  Similarity=0.003  Sum_probs=38.5

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCC-HHHHHHHHHcCCEEEEeCCC
Q 028618           70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVLTDPA  125 (206)
Q Consensus        70 ~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~-~~~~~~~~~~Ga~v~~~~~~  125 (206)
                      +..+|+..+|..|.++|......|.+++++-..... ....+.++..|.++..+..|
T Consensus        11 k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   67 (265)
T PRK07097         11 KIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCD   67 (265)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcC
Confidence            468899999999999999999999987766433211 12233455667777666544

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=80.13  E-value=21  Score=28.31  Aligned_cols=56  Identities=18%  Similarity=0.255  Sum_probs=40.0

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCC--HHHHHHHHHcCCEEEEeCCC
Q 028618           70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS--LERRIILRAFGAELVLTDPA  125 (206)
Q Consensus        70 ~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~--~~~~~~~~~~Ga~v~~~~~~  125 (206)
                      ++.+|+..+|.-|+++|......|.++++....+..  +...+.++..|.++..+..|
T Consensus         5 ~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D   62 (250)
T PRK08063          5 KVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKAN   62 (250)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcC
Confidence            367899999999999999999999987765433322  22334566678887776554

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=80.11  E-value=16  Score=29.73  Aligned_cols=56  Identities=16%  Similarity=0.084  Sum_probs=39.3

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCC-CHHHHHHHHHcCCEEEEeCCC
Q 028618           70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASM-SLERRIILRAFGAELVLTDPA  125 (206)
Q Consensus        70 ~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~-~~~~~~~~~~~Ga~v~~~~~~  125 (206)
                      +..+|+..+|..|.++|......|.+++++..... .+...+.++..|.++..+..|
T Consensus        11 k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D   67 (278)
T PRK08277         11 KVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKAD   67 (278)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECC
Confidence            36788889999999999999999998877765422 122234455567777666544

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=80.01  E-value=16  Score=30.50  Aligned_cols=56  Identities=18%  Similarity=0.109  Sum_probs=40.3

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCC--CHHHHHHHHHcCCEEEEeCCC
Q 028618           70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASM--SLERRIILRAFGAELVLTDPA  125 (206)
Q Consensus        70 ~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~--~~~~~~~~~~~Ga~v~~~~~~  125 (206)
                      +..+|+..+|.-|.++|......|.++++.-....  .....+.++..|.+++.+..|
T Consensus        13 k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~D   70 (306)
T PRK07792         13 KVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGD   70 (306)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCC
Confidence            46788899999999999999999998776643221  123345566778888777655

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	206
1z7w_A	322	Crystal Structure Of O-Acetylserine Sulfhydrylase F		3e-92
2isq_A	320	Crystal Structure Of O-Acetylserine Sulfhydrylase F		6e-92
1z7y_A	322	Crystal Structure Of The Arabidopsis Thaliana O-Ace		1e-91
4aec_A	430	Crystal Structure Of The Arabidopsis Thaliana O-Ace		1e-83
3vbe_A	344	Crystal Structure Of Beta-Cyanoalanine Synthase In		4e-70
3vc3_A	344	Crystal Structure Of Beta-Cyanoalanine Synthase K95		2e-69
2q3d_A	313	2.2 A Resolution Crystal Structure Of O-acetylserin		3e-54
2q3b_A	313	1.8 A Resolution Crystal Structure Of O-Acetylserin		1e-53
3rr2_A	314	Structure Of A Cysteine Synthase (O-Acetylserine Su		3e-52
1oas_A	322	O-Acetylserine Sulfhydrylase From Salmonella Typhim		1e-51
4i1y_A	314	The Structure Of Cysteine Synthase From Mycobacteri		1e-51
1d6s_A	322	Crystal Structure Of The K41a Mutant Of O-Acetylser		5e-51
2egu_A	308	Crystal Structure Of O-Acetylserine Sulfhydrase Fro		8e-49
1ve1_A	304	Crystal Structure Of T.Th. Hb8 O-Acetylserine Sulfh		6e-47
4air_A	354	Leishmania Major Cysteine Synthase Length = 354		5e-45
3t4p_A	334	Crystal Structure Of O-Acetyl Serine Sulfhydrylase		9e-45
1y7l_A	316	O-Acetylserine Sulfhydrylase Complex Length = 316		2e-41
2bht_A	303	Crystal Structure Of O-Acetylserine Sulfhydrylase B		3e-40
2bhs_A	303	Crystal Structure Of Cysteine Synthase B Length = 3		4e-40
2v03_A	303	High Resolution Structure And Catalysis Of An O- Ac		2e-39
2jc3_A	303	Structure Of O-acetylserine Sulfhydrylase B From Sa		3e-39
3fca_A	291	Genetic Incorporation Of A Metal-Ion Chelating Amin		3e-36
1o58_A	303	Crystal Structure Of O-Acetylserine Sulfhydrylase (		4e-36
1m54_A	363	Cystathionine-Beta Synthase: Reduced Vicinal Thiols		2e-34
3pc2_A	527	Full Length Structure Of Cystathionine Beta-Synthas		3e-34
1jbq_A	435	Structure Of Human Cystathionine Beta-Synthase: A U		4e-34
3bm5_A	338	Crystal Structure Of O-Acetyl-Serine Sulfhydrylase		3e-33
2pqm_A	343	Crystal Structure Of Cysteine Synthase (Oass) From		3e-33
3dwg_A	325	Crystal Structure Of A Sulfur Carrier Protein Compl		9e-33
3dki_A	326	2.1 A X-Ray Structure Of Cysm (Rv1336) From Mycobac		4e-32
3dwi_A	323	Crystal Structure Of Mycobacterium Tuberculosis Cys		4e-32
1wkv_A	389	Crystal Structure Of O-Phosphoserine Sulfhydrylase		4e-05
3vsc_A	389	Crystal Structure Of The K127a Mutant Of O-Phosphos		2e-04

>pdb|1Z7W|A Chain A, Crystal Structure Of O-Acetylserine Sulfhydrylase From Arabidopsis Thaliana Length = 322

Iteration: 1
 Score =  333 bits (855), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 159/201 (79%), Positives = 173/201 (86%)
Query: 5   SSNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKG 64
           +S IAKDVTELIGNTPLVYLNN+  GCV R+AAKLEMMEPCSSVKDRIG+SMISDAE KG
Sbjct: 2   ASRIAKDVTELIGNTPLVYLNNVAEGCVGRVAAKLEMMEPCSSVKDRIGFSMISDAEKKG 61
Query: 65  LITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDP 124
           LI PGESVLIEPTSGNTG+GLAF AAAK Y+LIITMPASMS ERRIIL AFG ELVLTDP
Sbjct: 62  LIKPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERRIILLAFGVELVLTDP 121
Query: 125 AKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSXXX 184
           AKGMKGA+ KAEEILAKTPN YMLQQFENPANPKIHYETTGPE+WKG+GG+ID  VS   
Sbjct: 122 AKGMKGAIAKAEEILAKTPNGYMLQQFENPANPKIHYETTGPEIWKGTGGKIDGFVSGIG 181
Query: 185 XXXXXXXXXKFLKEKNPNIKV 205
                    K+LKE+N N+K+
Sbjct: 182 TGGTITGAGKYLKEQNANVKL 202

>pdb|2ISQ|A Chain A, Crystal Structure Of O-Acetylserine Sulfhydrylase From Arabidopsis Thaliana In Complex With C-Terminal Peptide From Arabidopsis Serine Acetyltransferase Length = 320

Iteration: 1
 Score =  332 bits (852), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 159/200 (79%), Positives = 172/200 (86%)
Query: 6   SNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGL 65
           S IAKDVTELIGNTPLVYLNN+  GCV R+AAKLEMMEPCSSVKDRIG+SMISDAE KGL
Sbjct: 1   SRIAKDVTELIGNTPLVYLNNVAEGCVGRVAAKLEMMEPCSSVKDRIGFSMISDAEKKGL 60
Query: 66  ITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPA 125
           I PGESVLIEPTSGNTG+GLAF AAAK Y+LIITMPASMS ERRIIL AFG ELVLTDPA
Sbjct: 61  IKPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERRIILLAFGVELVLTDPA 120
Query: 126 KGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSXXXX 185
           KGMKGA+ KAEEILAKTPN YMLQQFENPANPKIHYETTGPE+WKG+GG+ID  VS    
Sbjct: 121 KGMKGAIAKAEEILAKTPNGYMLQQFENPANPKIHYETTGPEIWKGTGGKIDGFVSGIGT 180
Query: 186 XXXXXXXXKFLKEKNPNIKV 205
                   K+LKE+N N+K+
Sbjct: 181 GGTITGAGKYLKEQNANVKL 200

>pdb|1Z7Y|A Chain A, Crystal Structure Of The Arabidopsis Thaliana O-Acetylserine Sulfhydrylase K46a Mutant Length = 322

Iteration: 1
 Score =  332 bits (850), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 158/201 (78%), Positives = 172/201 (85%)
Query: 5   SSNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKG 64
           +S IAKDVTELIGNTPLVYLNN+  GCV R+AAKLEMMEPCSSV DRIG+SMISDAE KG
Sbjct: 2   ASRIAKDVTELIGNTPLVYLNNVAEGCVGRVAAKLEMMEPCSSVADRIGFSMISDAEKKG 61
Query: 65  LITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDP 124
           LI PGESVLIEPTSGNTG+GLAF AAAK Y+LIITMPASMS ERRIIL AFG ELVLTDP
Sbjct: 62  LIKPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERRIILLAFGVELVLTDP 121
Query: 125 AKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSXXX 184
           AKGMKGA+ KAEEILAKTPN YMLQQFENPANPKIHYETTGPE+WKG+GG+ID  VS   
Sbjct: 122 AKGMKGAIAKAEEILAKTPNGYMLQQFENPANPKIHYETTGPEIWKGTGGKIDGFVSGIG 181
Query: 185 XXXXXXXXXKFLKEKNPNIKV 205
                    K+LKE+N N+K+
Sbjct: 182 TGGTITGAGKYLKEQNANVKL 202

>pdb|4AEC|A Chain A, Crystal Structure Of The Arabidopsis Thaliana O-Acetyl- Serine-(Thiol)-Lyase C Length = 430

Iteration: 1
 Score =  305 bits (782), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 139/199 (69%), Positives = 168/199 (84%)
Query: 7   NIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLI 66
           NIA +V++LIG TP+VYLN+I  GCVA IAAKLE+MEPC SVKDRIGYSM++DAE KG I
Sbjct: 112 NIADNVSQLIGKTPMVYLNSIAKGCVANIAAKLEIMEPCCSVKDRIGYSMVTDAEQKGFI 171
Query: 67  TPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAK 126
           +PG+SVL+EPTSGNTGIGLAF+AA++ YRLI+TMPASMS+ERR++L+AFGAELVLTDPAK
Sbjct: 172 SPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVLTDPAK 231
Query: 127 GMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSXXXXX 186
           GM GAVQKAEEIL  TP+AYMLQQF+NPANPKIHYETTGPE+W  + G++D  V+     
Sbjct: 232 GMTGAVQKAEEILKNTPDAYMLQQFDNPANPKIHYETTGPEIWDDTKGKVDIFVAGIGTG 291
Query: 187 XXXXXXXKFLKEKNPNIKV 205
                  +F+KEKNP  +V
Sbjct: 292 GTITGVGRFIKEKNPKTQV 310

>pdb|3VBE|A Chain A, Crystal Structure Of Beta-Cyanoalanine Synthase In Soybean Length = 344

Iteration: 1
 Score =  260 bits (664), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 117/201 (58%), Positives = 153/201 (76%)
Query: 5   SSNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKG 64
           S+NI K V++LIG TPLVYLN +  GC A +A K EMM+P +S+KDR  Y+MI+DAE K 
Sbjct: 22  STNIKKHVSQLIGRTPLVYLNKVTEGCGAYVAVKQEMMQPTASIKDRPAYAMITDAEEKN 81
Query: 65  LITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDP 124
           LITPG++ LIEPTSGN GI +AFMAA K Y++++TMP+  SLERR+ +RAFGAEL+LTDP
Sbjct: 82  LITPGKTTLIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRVTMRAFGAELILTDP 141
Query: 125 AKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSXXX 184
           AKGM G V+KA E+L  TPNA+MLQQF NPAN ++H+ETTGPE+W+ + G++D  V    
Sbjct: 142 AKGMGGTVKKAYELLENTPNAHMLQQFSNPANTQVHFETTGPEIWEDTNGQVDIFVMGIG 201
Query: 185 XXXXXXXXXKFLKEKNPNIKV 205
                    ++LK KNPN+K+
Sbjct: 202 SGGTVSGVGQYLKSKNPNVKI 222

>pdb|3VC3|A Chain A, Crystal Structure Of Beta-Cyanoalanine Synthase K95a Mutant In Soybean Length = 344

Iteration: 1
 Score =  258 bits (658), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 116/201 (57%), Positives = 152/201 (75%)
Query: 5   SSNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKG 64
           S+NI K V++LIG TPLVYLN +  GC A +A K EMM+P +S+ DR  Y+MI+DAE K 
Sbjct: 22  STNIKKHVSQLIGRTPLVYLNKVTEGCGAYVAVKQEMMQPTASIADRPAYAMITDAEEKN 81
Query: 65  LITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDP 124
           LITPG++ LIEPTSGN GI +AFMAA K Y++++TMP+  SLERR+ +RAFGAEL+LTDP
Sbjct: 82  LITPGKTTLIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRVTMRAFGAELILTDP 141
Query: 125 AKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSXXX 184
           AKGM G V+KA E+L  TPNA+MLQQF NPAN ++H+ETTGPE+W+ + G++D  V    
Sbjct: 142 AKGMGGTVKKAYELLENTPNAHMLQQFSNPANTQVHFETTGPEIWEDTNGQVDIFVMGIG 201
Query: 185 XXXXXXXXXKFLKEKNPNIKV 205
                    ++LK KNPN+K+
Sbjct: 202 SGGTVSGVGQYLKSKNPNVKI 222

>pdb|2Q3D|A Chain A, 2.2 A Resolution Crystal Structure Of O-acetylserine Sulfhydrylase (oass) From Mycobacterium Tuberculosis In Complex With The Reaction Intermediate Alpha-aminoacrylate Length = 313

Iteration: 1
 Score =  207 bits (527), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 103/199 (51%), Positives = 140/199 (70%), Gaps = 3/199 (1%)
Query: 7   NIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLI 66
           +IA+D+T+LIG TPLV L  + +G VA I AKLE   P +SVKDRIG +M+  AE  GLI
Sbjct: 5   SIAEDITQLIGRTPLVRLRRVTDGAVADIVAKLEFFNPANSVKDRIGVAMLQAAEQAGLI 64
Query: 67  TPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAK 126
            P +++++EPTSGNTGI LA + AA+ YR ++TMP +MSLERR++LRA+GAEL+LT  A 
Sbjct: 65  KP-DTIILEPTSGNTGIALAMVCAARGYRCVLTMPETMSLERRMLLRAYGAELILTPGAD 123
Query: 127 GMKGAVQKAEEILAKTPNAYML-QQFENPANPKIHYETTGPELWKGSGGRIDALVSXXXX 185
           GM GA+ KAEE LAKT   Y + QQFENPANP IH  TT  E+W+ + G++D +V+    
Sbjct: 124 GMSGAIAKAEE-LAKTDQRYFVPQQFENPANPAIHRVTTAEEVWRDTDGKVDIVVAGVGT 182
Query: 186 XXXXXXXXKFLKEKNPNIK 204
                   + +KE+ P+ +
Sbjct: 183 GGTITGVAQVIKERKPSAR 201

>pdb|2Q3B|A Chain A, 1.8 A Resolution Crystal Structure Of O-Acetylserine Sulfhydrylase (Oass) Holoenzyme From Mycobacterium Tuberculosis Length = 313

Iteration: 1
 Score =  205 bits (521), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 102/199 (51%), Positives = 139/199 (69%), Gaps = 3/199 (1%)
Query: 7   NIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLI 66
           +IA+D+T+LIG TPLV L  + +G VA I AKLE   P +SV DRIG +M+  AE  GLI
Sbjct: 5   SIAEDITQLIGRTPLVRLRRVTDGAVADIVAKLEFFNPANSVXDRIGVAMLQAAEQAGLI 64
Query: 67  TPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAK 126
            P +++++EPTSGNTGI LA + AA+ YR ++TMP +MSLERR++LRA+GAEL+LT  A 
Sbjct: 65  KP-DTIILEPTSGNTGIALAMVCAARGYRCVLTMPETMSLERRMLLRAYGAELILTPGAD 123
Query: 127 GMKGAVQKAEEILAKTPNAYML-QQFENPANPKIHYETTGPELWKGSGGRIDALVSXXXX 185
           GM GA+ KAEE LAKT   Y + QQFENPANP IH  TT  E+W+ + G++D +V+    
Sbjct: 124 GMSGAIAKAEE-LAKTDQRYFVPQQFENPANPAIHRVTTAEEVWRDTDGKVDIVVAGVGT 182
Query: 186 XXXXXXXXKFLKEKNPNIK 204
                   + +KE+ P+ +
Sbjct: 183 GGTITGVAQVIKERKPSAR 201

>pdb|3RR2|A Chain A, Structure Of A Cysteine Synthase (O-Acetylserine Sulfhydrylase (Oass)) From Mycobacterium Marinum Atcc Baa-535 M Length = 314

Iteration: 1
 Score =  201 bits (510), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 99/201 (49%), Positives = 140/201 (69%), Gaps = 3/201 (1%)
Query: 5   SSNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKG 64
           S  IA+++T+LIG TPLV L  + +G  A + AKLE   P  S+KDRIG +MI  AE  G
Sbjct: 4   SMTIAENITQLIGGTPLVRLRRVTDGAAADVVAKLESFNPAGSIKDRIGVAMIDAAEKAG 63
Query: 65  LITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDP 124
           LI P +++++EPTSGNTGI LA ++AA+ Y+ ++TMP +MS+ERR++LRA+GAELVLT  
Sbjct: 64  LIKP-DTIILEPTSGNTGIALAMVSAARGYKCVLTMPDTMSIERRMLLRAYGAELVLTPG 122
Query: 125 AKGMKGAVQKAEEILAKTPNAYML-QQFENPANPKIHYETTGPELWKGSGGRIDALVSXX 183
           A+GM GA+ KAEE LAKT + Y + QQFENPANP +H  TT  E+W+ + G++D  VS  
Sbjct: 123 AEGMAGAIAKAEE-LAKTDDRYFIPQQFENPANPAVHAVTTAEEVWRDTDGKVDIFVSGV 181
Query: 184 XXXXXXXXXXKFLKEKNPNIK 204
                     + +K++ P+ +
Sbjct: 182 GTGGTITGVAQVIKQRRPSAQ 202

>pdb|1OAS|A Chain A, O-Acetylserine Sulfhydrylase From Salmonella Typhimurium Length = 322

Iteration: 1
 Score =  199 bits (506), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 102/177 (57%), Positives = 133/177 (75%), Gaps = 5/177 (2%)
Query: 6   SNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGL 65
           S I +D +  IG+TPLV LN I NG   RI AK+E   P  SVK RIG +MI DAE +G+
Sbjct: 1   SKIYEDNSLTIGHTPLVRLNRIGNG---RILAKVESRNPSFSVKCRIGANMIWDAEKRGV 57
Query: 66  ITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPA 125
           + PG   L+EPT+GNTGI LA++AAA+ Y+L +TMP +MS+ERR +L+A GA LVLT+ A
Sbjct: 58  LKPGVE-LVEPTNGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLKALGANLVLTEGA 116
Query: 126 KGMKGAVQKAEEILAKTPNAY-MLQQFENPANPKIHYETTGPELWKGSGGRIDALVS 181
           KGMKGA+QKAEEI+A  P  Y +LQQF NPANP+IH +TTGPE+W+ + G++D  +S
Sbjct: 117 KGMKGAIQKAEEIVASDPQKYLLLQQFSNPANPEIHEKTTGPEIWEDTDGQVDVFIS 173

>pdb|4I1Y|A Chain A, The Structure Of Cysteine Synthase From Mycobacterium Ulcerans Agy99 Length = 314

Iteration: 1
 Score =  199 bits (505), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 98/201 (48%), Positives = 139/201 (69%), Gaps = 3/201 (1%)
Query: 5   SSNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKG 64
           S  IA+++ +LIG TPLV L  + +G  A + AKLE   P  S+KDRIG +MI  AE  G
Sbjct: 4   SMTIAENIAQLIGGTPLVRLRRVTDGAAADVVAKLESFNPAGSIKDRIGVAMIDAAEKAG 63
Query: 65  LITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDP 124
           LI P +++++EPTSGNTGI LA ++AA+ Y+ ++TMP +MS+ERR++LRA+GAELVLT  
Sbjct: 64  LIKP-DTIILEPTSGNTGIALAMVSAARGYKCVLTMPDTMSIERRMLLRAYGAELVLTPG 122
Query: 125 AKGMKGAVQKAEEILAKTPNAYML-QQFENPANPKIHYETTGPELWKGSGGRIDALVSXX 183
           A+GM GA+ KAEE LAKT + Y + QQFENPANP +H  TT  E+W+ + G++D  VS  
Sbjct: 123 AEGMAGAIAKAEE-LAKTDDRYFIPQQFENPANPAVHAVTTAEEVWRDTDGKVDIFVSGV 181
Query: 184 XXXXXXXXXXKFLKEKNPNIK 204
                     + +K++ P+ +
Sbjct: 182 GTGGTITGVAQVIKQRRPSAQ 202

>pdb|1D6S|A Chain A, Crystal Structure Of The K41a Mutant Of O-Acetylserine Sulfhydrylase Complexed In External Aldimine Linkage With Methionine Length = 322

Iteration: 1
 Score =  197 bits (500), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 101/177 (57%), Positives = 132/177 (74%), Gaps = 5/177 (2%)
Query: 6   SNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGL 65
           S I +D +  IG+TPLV LN I NG   RI AK+E   P  SV  RIG +MI DAE +G+
Sbjct: 1   SKIYEDNSLTIGHTPLVRLNRIGNG---RILAKVESRNPSFSVACRIGANMIWDAEKRGV 57
Query: 66  ITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPA 125
           + PG   L+EPT+GNTGI LA++AAA+ Y+L +TMP +MS+ERR +L+A GA LVLT+ A
Sbjct: 58  LKPGVE-LVEPTNGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLKALGANLVLTEGA 116
Query: 126 KGMKGAVQKAEEILAKTPNAY-MLQQFENPANPKIHYETTGPELWKGSGGRIDALVS 181
           KGMKGA+QKAEEI+A  P  Y +LQQF NPANP+IH +TTGPE+W+ + G++D  +S
Sbjct: 117 KGMKGAIQKAEEIVASDPQKYLLLQQFSNPANPEIHEKTTGPEIWEDTDGQVDVFIS 173

>pdb|2EGU|A Chain A, Crystal Structure Of O-Acetylserine Sulfhydrase From Geobacillus Kaustophilus Hta426 Length = 308

Iteration: 1
 Score =  189 bits (480), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 102/194 (52%), Positives = 133/194 (68%), Gaps = 2/194 (1%)
Query: 12  VTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGES 71
           +TELIG+TP V LN IV+   A +  KLE M P SSVKDRI  +MI  AE  G + PG++
Sbjct: 8   ITELIGDTPAVKLNRIVDEDSADVYLKLEFMNPGSSVKDRIALAMIEAAEKAGKLKPGDT 67
Query: 72  VLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGA 131
           + +EPTSGNTGIGLA +AAAK Y+ ++ MP +MSLERR +LRA+GAELVLT  A+GM+GA
Sbjct: 68  I-VEPTSGNTGIGLAMVAAAKGYKAVLVMPDTMSLERRNLLRAYGAELVLTPGAQGMRGA 126
Query: 132 VQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSXXXXXXXXXX 191
           + KAEE L +    +M QQF+N ANP+IH  TTG E+ +  G ++DA V+          
Sbjct: 127 IAKAEE-LVREHGYFMPQQFKNEANPEIHRLTTGKEIVEQMGDQLDAFVAGVGTGGTITG 185
Query: 192 XXKFLKEKNPNIKV 205
             K L+E  PNIK+
Sbjct: 186 AGKVLREAYPNIKI 199

>pdb|1VE1|A Chain A, Crystal Structure Of T.Th. Hb8 O-Acetylserine Sulfhydrylase Length = 304

Iteration: 1
 Score =  183 bits (464), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 96/191 (50%), Positives = 129/191 (67%), Gaps = 2/191 (1%)
Query: 16  IGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGE-SVLI 74
           IG TP+V L  +V   +A +  KLE + P  S+KDR  + MI DAE +G++ PG   V++
Sbjct: 7   IGKTPVVRLAKVVEPDMAEVWVKLEGLNPGGSIKDRPAWYMIKDAEERGILRPGSGQVIV 66
Query: 75  EPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQK 134
           EPTSGNTGIGLA +AA++ YRLI+TMPA MS ER+ +L+AFGAELVLTDP + M  A ++
Sbjct: 67  EPTSGNTGIGLAMIAASRGYRLILTMPAQMSEERKRVLKAFGAELVLTDPERRMLAAREE 126
Query: 135 AEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSXXXXXXXXXXXXK 194
           A   L +   A+M  QF+NPAN + HYETTGPEL++   GRIDA V             +
Sbjct: 127 ALR-LKEELGAFMPDQFKNPANVRAHYETTGPELYEALEGRIDAFVYGSGTGGTITGVGR 185
Query: 195 FLKEKNPNIKV 205
           +LKE+ P++KV
Sbjct: 186 YLKERIPHVKV 196

>pdb|4AIR|A Chain A, Leishmania Major Cysteine Synthase Length = 354

Iteration: 1
 Score =  177 bits (448), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 84/178 (47%), Positives = 123/178 (69%), Gaps = 1/178 (0%)
Query: 4   ESSNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAK 63
           +S N+A+ + +LIG TP +YLN + N   A++  K+E   P +SVKDR+G+++   AE +
Sbjct: 28  KSRNVAQSIDQLIGQTPALYLNKL-NNTKAKVVLKMECENPMASVKDRLGFAIYDKAEKE 86
Query: 64  GLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTD 123
           G + PG+SV++E +SGNTG+ LA + A + Y++IITMP SMSLERR +LR FGAE++LT 
Sbjct: 87  GKLIPGKSVVVESSSGNTGVSLAHLGAIRGYKVIITMPESMSLERRCLLRIFGAEVILTP 146
Query: 124 PAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVS 181
            A GMKGAV  A++I+   PNA +  QF    N  IH ETTGPE+W+ +   +D  ++
Sbjct: 147 AALGMKGAVTMAKKIVTANPNAVLADQFATKYNALIHEETTGPEIWEQTNHNVDCFIA 204

>pdb|3T4P|A Chain A, Crystal Structure Of O-Acetyl Serine Sulfhydrylase From Leishmania Donovani In Complex With Designed Tetrapeptide Length = 334

Iteration: 1
 Score =  176 bits (445), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 83/178 (46%), Positives = 123/178 (69%), Gaps = 1/178 (0%)
Query: 4   ESSNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAK 63
           +S N+A+ + +LIG TP +YLN + N   A++  K+E   P +SV DR+G+++   AE +
Sbjct: 7   KSKNVAQSIDQLIGQTPALYLNKL-NNTKAKVVLKMECENPMASVXDRLGFAIYDKAEKE 65
Query: 64  GLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTD 123
           G + PG+S+++E +SGNTG+ LA + A + Y++IITMP SMSLERR +LR FGAE++LT 
Sbjct: 66  GKLIPGKSIVVESSSGNTGVSLAHLGAIRGYKVIITMPESMSLERRCLLRIFGAEVILTP 125
Query: 124 PAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVS 181
            A GMKGAV  A++I+A  PNA +  QF    N  IH ETTGPE+W+ +   +D  ++
Sbjct: 126 AALGMKGAVAMAKKIVAANPNAVLADQFATKYNALIHEETTGPEIWEQTNHNVDCFIA 183

>pdb|1Y7L|A Chain A, O-Acetylserine Sulfhydrylase Complex Length = 316

Iteration: 1
 Score =  165 bits (417), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 87/164 (53%), Positives = 114/164 (69%), Gaps = 4/164 (2%)
Query: 8   IAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLIT 67
           I  D +  IGNTPLV L +   G    +  K+E   P  SV  RIG +M+  AE  G +T
Sbjct: 3   IYADNSYSIGNTPLVRLKHF--GHNGNVVVKIEGRNPSYSVXCRIGANMVWQAEKDGTLT 60
Query: 68  PGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKG 127
            G+ + ++ TSGNTGI LA++AAA+ Y++ +TMP +MSLER+ +L   G  LVLT+ AKG
Sbjct: 61  KGKEI-VDATSGNTGIALAYVAAARGYKITLTMPETMSLERKRLLCGLGVNLVLTEGAKG 119
Query: 128 MKGAVQKAEEILAKTPNAY-MLQQFENPANPKIHYETTGPELWK 170
           MKGA+ KAEEI+A  P+ Y ML+QFENPANP+IH ETTGPE+WK
Sbjct: 120 MKGAIAKAEEIVASDPSRYVMLKQFENPANPQIHRETTGPEIWK 163

>pdb|2BHT|A Chain A, Crystal Structure Of O-Acetylserine Sulfhydrylase B Length = 303

Iteration: 1
 Score =  160 bits (406), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 88/192 (45%), Positives = 116/192 (60%), Gaps = 2/192 (1%)
Query: 14  ELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVL 73
           + IGNTPLV L  +     + +  KLE   P  SV DR   SMI +AE +G I PG+ VL
Sbjct: 6   QTIGNTPLVKLQRMGPDNGSEVWLKLEGNNPAGSVXDRAALSMIVEAEKRGRIKPGD-VL 64
Query: 74  IEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQ 133
           IE TSGNTGI LA +AA K YR+ + MP +MS ERR  +RA+GAEL+L    +GM+GA  
Sbjct: 65  IEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERRAAMRAYGAELILVTKEQGMEGARD 124
Query: 134 KAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSXXXXXXXXXXXX 193
            A E +A      +L QF NP NPK HY TTGPE+W+ +GGRI   VS            
Sbjct: 125 LALE-MANRGEGKLLDQFNNPDNPKAHYTTTGPEIWQQTGGRITHFVSSMGTTGTITGVS 183
Query: 194 KFLKEKNPNIKV 205
           +F++E++  + +
Sbjct: 184 EFMREQSKPVTI 195

>pdb|2BHS|A Chain A, Crystal Structure Of Cysteine Synthase B Length = 303

Iteration: 1
 Score =  160 bits (406), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 88/192 (45%), Positives = 116/192 (60%), Gaps = 2/192 (1%)
Query: 14  ELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVL 73
           + IGNTPLV L  +     + +  KLE   P  SVKDR   SMI +AE +G I PG+ VL
Sbjct: 6   QTIGNTPLVKLQRMGPDNGSEVWLKLEGNNPAGSVKDRAALSMIVEAEKRGEIKPGD-VL 64
Query: 74  IEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQ 133
           IE TSGNTGI LA +AA K YR+ + MP +MS ERR  +RA+GAEL+L    +GM+GA  
Sbjct: 65  IEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERRAAMRAYGAELILVTKEQGMEGARD 124
Query: 134 KAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSXXXXXXXXXXXX 193
            A E +A      +L QF NP NP  HY TTGPE+W+ +GGRI   VS            
Sbjct: 125 LALE-MANRGEGKLLDQFNNPDNPYAHYTTTGPEIWQQTGGRITHFVSSMGTTGTITGVS 183
Query: 194 KFLKEKNPNIKV 205
           +F++E++  + +
Sbjct: 184 RFMREQSKPVTI 195

>pdb|2V03|A Chain A, High Resolution Structure And Catalysis Of An O- Acetylserine Sulfhydrylase Length = 303

Iteration: 1
 Score =  158 bits (400), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 87/192 (45%), Positives = 115/192 (59%), Gaps = 2/192 (1%)
Query: 14  ELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVL 73
           + IGNTPLV L  +     + +  KLE   P  SV DR   SMI +AE +G I PG+ VL
Sbjct: 6   QTIGNTPLVKLQRMGPDNGSEVWLKLEGNNPAGSVXDRAALSMIVEAEKRGEIKPGD-VL 64
Query: 74  IEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQ 133
           IE TSGNTGI LA +AA K YR+ + MP +MS ERR  +RA+GAEL+L    +GM+GA  
Sbjct: 65  IEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERRAAMRAYGAELILVTKEQGMEGARD 124
Query: 134 KAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSXXXXXXXXXXXX 193
            A E +A      +L QF NP NP  HY TTGPE+W+ +GGRI   VS            
Sbjct: 125 LALE-MANRGEGKLLDQFNNPDNPYAHYTTTGPEIWQQTGGRITHFVSSMGTTGTITGVS 183
Query: 194 KFLKEKNPNIKV 205
           +F++E++  + +
Sbjct: 184 RFMREQSKPVTI 195

>pdb|2JC3|A Chain A, Structure Of O-acetylserine Sulfhydrylase B From Salmonella Typhimurium Length = 303

Iteration: 1
 Score =  157 bits (398), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 88/192 (45%), Positives = 114/192 (59%), Gaps = 2/192 (1%)
Query: 14  ELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVL 73
           + IGNTPLV L  I     + I  KLE   P  SVKDR   SMI +AE +G I PG+ VL
Sbjct: 6   QTIGNTPLVKLQRIGPDNGSEIWVKLEGNNPAGSVKDRAALSMIVEAEKRGEIKPGD-VL 64
Query: 74  IEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQ 133
           IE TSGNTGI LA +AA K YR+ + MP +MS ERR  +RA+GAEL+L    +GM+GA  
Sbjct: 65  IEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERRAAMRAYGAELILVTKEQGMEGARD 124
Query: 134 KAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSXXXXXXXXXXXX 193
            A   +++     +L QF NP NP  HY TTGPE+W+ + GRI   VS            
Sbjct: 125 LA-LAMSERGEGKLLDQFNNPDNPYAHYTTTGPEIWRQTSGRITHFVSSMGTTGTITGVS 183
Query: 194 KFLKEKNPNIKV 205
           +FL+E+   + +
Sbjct: 184 RFLREQEKPVTI 195

>pdb|3FCA|A Chain A, Genetic Incorporation Of A Metal-Ion Chelating Amino Acid Into Proteins As Biophysical Probe Length = 291

Iteration: 1
 Score =  147 bits (372), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 86/167 (51%), Positives = 111/167 (66%), Gaps = 8/167 (4%)
Query: 15  LIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLI 74
           LIG+TP+V L++I     +RI  KLE   P  SVKDR    MI DAE +GL+  G   ++
Sbjct: 5   LIGSTPIVRLDSID----SRIXLKLEKNNPGGSVKDRPALFMILDAEKRGLLKNG---IV 57
Query: 75  EPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQK 134
           EPTSGN GI +A + A + +R+I+TMP +MS+ERR +L+  GAELVLT    GMKGAV+K
Sbjct: 58  EPTSGNMGIAIAMIGAKRGHRVILTMPETMSVERRKVLKMLGAELVLTPGELGMKGAVEK 117
Query: 135 AEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVS 181
           A EI  +T  A+ML QFENP N   H  TTGPE+ K    +IDA V+
Sbjct: 118 ALEISRET-GAHMLNQFENPYNVYSHQFTTGPEILKQMDYQIDAFVA 163

>pdb|1O58|A Chain A, Crystal Structure Of O-Acetylserine Sulfhydrylase (Tm0665) From Thermotoga Maritima At 1.80 A Resolution Length = 303

Iteration: 1
 Score =  147 bits (371), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 86/167 (51%), Positives = 111/167 (66%), Gaps = 8/167 (4%)
Query: 15  LIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLI 74
           LIG+TP+V L++I     +RI  KLE   P  SVKDR    MI DAE +GL+  G   ++
Sbjct: 17  LIGSTPIVRLDSID----SRIFLKLEKNNPGGSVKDRPALFMILDAEKRGLLKNG---IV 69
Query: 75  EPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQK 134
           EPTSGN GI +A + A + +R+I+TMP +MS+ERR +L+  GAELVLT    GMKGAV+K
Sbjct: 70  EPTSGNMGIAIAMIGAKRGHRVILTMPETMSVERRKVLKMLGAELVLTPGELGMKGAVEK 129
Query: 135 AEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVS 181
           A EI  +T  A+ML QFENP N   H  TTGPE+ K    +IDA V+
Sbjct: 130 ALEISRET-GAHMLNQFENPYNVYSHQFTTGPEILKQMDYQIDAFVA 175

>pdb|1M54|A Chain A, Cystathionine-Beta Synthase: Reduced Vicinal Thiols Length = 363

Iteration: 1
 Score =  142 bits (357), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 84/208 (40%), Positives = 116/208 (55%), Gaps = 8/208 (3%)
Query: 4   ESSNIAKDVTELIGNTPLVYLNNIVN--GCVARIAAKLEMMEPCSSVKDRIGYSMISDAE 61
           +S  I  D+ + IG+TP+V +N I    G    + AK E      SVKDRI   MI DAE
Sbjct: 29  KSPKILPDILKKIGDTPMVRINKIGKKFGLKCELLAKCEFFNAGGSVKDRISLRMIEDAE 88
Query: 62  AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVL 121
             G + PG+++ IEPTSGNTGIGLA  AA + YR II MP  MS E+  +LRA GAE+V 
Sbjct: 89  RDGTLKPGDTI-IEPTSGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDVLRALGAEIVR 147
Query: 122 TDPAKGM----KGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRID 177
           T P        +  V  A  +  + PN+++L Q+ N +NP  HY+TT  E+ +   G++D
Sbjct: 148 T-PTNARFDSPESHVGVAWRLKNEIPNSHILDQYRNASNPLAHYDTTADEILQQCDGKLD 206
Query: 178 ALVSXXXXXXXXXXXXKFLKEKNPNIKV 205
            LV+            + LKEK P  ++
Sbjct: 207 MLVASVGTGGTITGIARKLKEKCPGCRI 234

>pdb|3PC2|A Chain A, Full Length Structure Of Cystathionine Beta-Synthase From Drosophila Length = 527

Iteration: 1
 Score =  141 bits (355), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 81/206 (39%), Positives = 118/206 (57%), Gaps = 8/206 (3%)
Query: 6   SNIAKDVTELIGNTPLVYLNNI--VNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAK 63
             I  ++ E+IG TPLV LNNI   +G    + AK E + P  SVKDRIGY M+ DAE +
Sbjct: 48  QQITPNILEVIGCTPLVKLNNIPASDGIECEMYAKCEFLNPGGSVKDRIGYRMVQDAEEQ 107
Query: 64  GLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTD 123
           GL+ PG ++ IEPTSGNTGIGLA   A K Y+ II MP  MS E+   LR  GA+++ T 
Sbjct: 108 GLLKPGYTI-IEPTSGNTGIGLAMACAVKGYKCIIVMPEKMSNEKVSALRTLGAKIIRT- 165
Query: 124 PAKGM----KGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDAL 179
           P +      +G +  A+++  +TPN+ +L Q+ N  NP  HY+ T  E+      ++D +
Sbjct: 166 PTEAAYDSPEGLIYVAQQLQRETPNSIVLDQYRNAGNPLAHYDGTAAEILWQLDNKVDMI 225
Query: 180 VSXXXXXXXXXXXXKFLKEKNPNIKV 205
           V             + +KE+ P+ ++
Sbjct: 226 VVSAGTAGTISGIGRKIKEQVPSCQI 251

>pdb|1JBQ|A Chain A, Structure Of Human Cystathionine Beta-Synthase: A Unique Pyridoxal 5'- Phosphate Dependent Hemeprotein Length = 435

Iteration: 1
 Score =  140 bits (354), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 84/208 (40%), Positives = 116/208 (55%), Gaps = 8/208 (3%)
Query: 4   ESSNIAKDVTELIGNTPLVYLNNIVN--GCVARIAAKLEMMEPCSSVKDRIGYSMISDAE 61
           +S  I  D+ + IG+TP+V +N I    G    + AK E      SVKDRI   MI DAE
Sbjct: 94  KSPKILPDILKKIGDTPMVRINKIGKKFGLKCELLAKCEFFNAGGSVKDRISLRMIEDAE 153
Query: 62  AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVL 121
             G + PG+++ IEPTSGNTGIGLA  AA + YR II MP  MS E+  +LRA GAE+V 
Sbjct: 154 RDGTLKPGDTI-IEPTSGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDVLRALGAEIVR 212
Query: 122 TDPAKGM----KGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRID 177
           T P        +  V  A  +  + PN+++L Q+ N +NP  HY+TT  E+ +   G++D
Sbjct: 213 T-PTNARFDSPESHVGVAWRLKNEIPNSHILDQYRNASNPLAHYDTTADEILQQCDGKLD 271
Query: 178 ALVSXXXXXXXXXXXXKFLKEKNPNIKV 205
            LV+            + LKEK P  ++
Sbjct: 272 MLVASVGTGGTITGIARKLKEKCPGCRI 299

>pdb|3BM5|A Chain A, Crystal Structure Of O-Acetyl-Serine Sulfhydrylase From Entamoeba Histolytica In Complex With Cysteine Length = 338

Iteration: 1
 Score =  137 bits (346), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 75/179 (41%), Positives = 110/179 (61%), Gaps = 7/179 (3%)
Query: 8   IAKDVTELIGNTPLVYLNNIVNGCV----ARIAAKLEMMEPCSSVKDRIGYSMISDAEAK 63
           I  ++ E IG TPLV L+ +          RI  KLE   P SSVKDR+G++++  A   
Sbjct: 12  IYHNILETIGGTPLVELHGVTEHPRIKKGTRILVKLEYFNPMSSVKDRVGFNIVYQAIKD 71
Query: 64  GLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTD 123
           G + PG  + IE TSGNTGI L    A   YR+ I MP++MS+ER++I++AFGAEL+LT+
Sbjct: 72  GRLKPGMEI-IESTSGNTGIALCQAGAVFGYRVNIAMPSTMSVERQMIMKAFGAELILTE 130
Query: 124 PAKGMKGAVQKAEEILAKTPNAYML-QQFENPANPKIHYETTGPELWKGSGGRIDALVS 181
             KGM GA+++  +++ + P  Y +  QF NP N   H+ T   E+W+ + G +D +VS
Sbjct: 131 GKKGMPGAIEEVNKMIKENPGKYFVANQFGNPDNTAAHHYTAN-EIWEDTDGEVDIVVS 188

>pdb|2PQM|A Chain A, Crystal Structure Of Cysteine Synthase (Oass) From Entamoeba Histolytica At 1.86 A Resolution Length = 343

Iteration: 1
 Score =  137 bits (346), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 75/179 (41%), Positives = 110/179 (61%), Gaps = 7/179 (3%)
Query: 8   IAKDVTELIGNTPLVYLNNIVNGCV----ARIAAKLEMMEPCSSVKDRIGYSMISDAEAK 63
           I  ++ E IG TPLV L+ +          RI  KLE   P SSVKDR+G++++  A   
Sbjct: 13  IYHNILETIGGTPLVELHGVTEHPRIKKGTRILVKLEYFNPMSSVKDRVGFNIVYQAIKD 72
Query: 64  GLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTD 123
           G + PG  + IE TSGNTGI L    A   YR+ I MP++MS+ER++I++AFGAEL+LT+
Sbjct: 73  GRLKPGMEI-IESTSGNTGIALCQAGAVFGYRVNIAMPSTMSVERQMIMKAFGAELILTE 131
Query: 124 PAKGMKGAVQKAEEILAKTPNAYML-QQFENPANPKIHYETTGPELWKGSGGRIDALVS 181
             KGM GA+++  +++ + P  Y +  QF NP N   H+ T   E+W+ + G +D +VS
Sbjct: 132 GKKGMPGAIEEVNKMIKENPGKYFVANQFGNPDNTAAHHYTAN-EIWEDTDGEVDIVVS 189

>pdb|3DWG|A Chain A, Crystal Structure Of A Sulfur Carrier Protein Complex Found In The Cysteine Biosynthetic Pathway Of Mycobacterium Tuberculosis Length = 325

Iteration: 1
 Score =  136 bits (342), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 82/199 (41%), Positives = 108/199 (54%), Gaps = 9/199 (4%)
Query: 14  ELIGNTPLVYLNNIV-------NGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLI 66
           + +GNTPLV L  +        +G   R+ AKLE   P  S+KDR    MI  AEA GL+
Sbjct: 11  QALGNTPLVGLQRLSPRWDDGRDGPHVRLWAKLEDRNPTGSIKDRPAVRMIEQAEADGLL 70
Query: 67  TPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAK 126
            PG ++L EPTSGNTGI LA  A  K YRLI  MP + S+ERR +L  +GA+++ +    
Sbjct: 71  RPGATIL-EPTSGNTGISLAMAARLKGYRLICVMPENTSVERRQLLELYGAQIIFSAAEG 129
Query: 127 GMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSXXXXX 186
           G   AV  A+E+ A  P+  ML Q+ NPAN   HY  TGPEL       I   V+     
Sbjct: 130 GSNTAVATAKELAATNPSWVMLYQYGNPANTDSHYCGTGPEL-LADLPEITHFVAGLGTT 188
Query: 187 XXXXXXXKFLKEKNPNIKV 205
                  +FL+E   N+K+
Sbjct: 189 GTLMGTGRFLREHVANVKI 207

>pdb|3DKI|A Chain A, 2.1 A X-Ray Structure Of Cysm (Rv1336) From Mycobacterium Tuberculosis An O-Phosphoserine Dependent Cysteine Synthase Length = 326

Iteration: 1
 Score =  134 bits (336), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 81/199 (40%), Positives = 107/199 (53%), Gaps = 9/199 (4%)
Query: 14  ELIGNTPLVYLNNIV-------NGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLI 66
           + +GNTPLV L  +        +G   R+ AKLE   P  S+ DR    MI  AEA GL+
Sbjct: 12  QALGNTPLVGLQRLSPRWDDGRDGPHVRLWAKLEDRNPTGSIXDRPAVRMIEQAEADGLL 71
Query: 67  TPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAK 126
            PG ++L EPTSGNTGI LA  A  K YRLI  MP + S+ERR +L  +GA+++ +    
Sbjct: 72  RPGATIL-EPTSGNTGISLAMAARLKGYRLICVMPENTSVERRQLLELYGAQIIFSAAEG 130
Query: 127 GMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSXXXXX 186
           G   AV  A+E+ A  P+  ML Q+ NPAN   HY  TGPEL       I   V+     
Sbjct: 131 GSNTAVATAKELAATNPSWVMLYQYGNPANTDSHYCGTGPEL-LADLPEITHFVAGLGTT 189
Query: 187 XXXXXXXKFLKEKNPNIKV 205
                  +FL+E   N+K+
Sbjct: 190 GTLMGTGRFLREHVANVKI 208

>pdb|3DWI|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cysm, The Cysteine Synthase B Length = 323

Iteration: 1
 Score =  134 bits (336), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 81/199 (40%), Positives = 107/199 (53%), Gaps = 9/199 (4%)
Query: 14  ELIGNTPLVYLNNIV-------NGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLI 66
           + +GNTPLV L  +        +G   R+ AKLE   P  S+KDR    MI  AEA GL+
Sbjct: 9   QALGNTPLVGLQRLSPRWDDGRDGPHVRLWAKLEDRNPTGSIKDRPAVRMIEQAEADGLL 68
Query: 67  TPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAK 126
            PG ++L EPTSGNTGI LA  A  K YRLI  MP + S+ERR +L  +GA+++ +    
Sbjct: 69  RPGATIL-EPTSGNTGISLAMAARLKGYRLICVMPENTSVERRQLLELYGAQIIFSAAEG 127
Query: 127 GMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSXXXXX 186
           G   AV  A+E+ A  P+  ML Q+ NPAN   HY  TGPEL       I   V+     
Sbjct: 128 GSNTAVATAKELAATNPSWVMLYQYGNPANTDSHYCGTGPEL-LADLPEITHFVAGLGTT 186
Query: 187 XXXXXXXKFLKEKNPNIKV 205
                  +FL+E   N+ +
Sbjct: 187 GTLMGTGRFLREHVANVAI 205

>pdb|1WKV|A Chain A, Crystal Structure Of O-Phosphoserine Sulfhydrylase Length = 389

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 72/155 (46%), Gaps = 12/155 (7%)
Query: 19  TPLVYLN-NIVNGCVARIAAKLEMMEPCS-SVKDRIGYSMISDAEAKGLITPGESVLIEP 76
           TPLV     + NG   R+  KLE   P S SVKDR    +IS    +  +  G S++ + 
Sbjct: 97  TPLVRSRLQLPNGV--RVWLKLEWYNPFSLSVKDRPAVEIISRLSRR--VEKG-SLVADA 151
Query: 77  TSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAE 136
           TS N G+ L+ +A    YR  + +P +     +++ R  GA+ V+ DP       V    
Sbjct: 152 TSSNFGVALSAVARLYGYRARVYLPGAAEEFGKLLPRLLGAQ-VIVDPEA--PSTVHLLP 208
Query: 137 EILAKTPNAYMLQ--QFENPANPKIHYETTGPELW 169
            ++  + N   +   QF N AN + H   T  E++
Sbjct: 209 RVMKDSKNEGFVHVNQFYNDANFEAHMRGTAREIF 243

>pdb|3VSC|A Chain A, Crystal Structure Of The K127a Mutant Of O-Phosphoserine Sulfhydrylase Complexed With External Schiff Base Of Pyridoxal 5'-Phosphate With O- Phospho-L-Serine Length = 389

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 71/155 (45%), Gaps = 12/155 (7%)
Query: 19  TPLVYLN-NIVNGCVARIAAKLEMMEPCS-SVKDRIGYSMISDAEAKGLITPGESVLIEP 76
           TPLV     + NG   R+  KLE   P S SV DR    +IS    +  +  G S++ + 
Sbjct: 97  TPLVRSRLQLPNGV--RVWLKLEWYNPFSLSVADRPAVEIISRLSRR--VEKG-SLVADA 151
Query: 77  TSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAE 136
           TS N G+ L+ +A    YR  + +P +     +++ R  GA+ V+ DP       V    
Sbjct: 152 TSSNFGVALSAVARLYGYRARVYLPGAAEEFGKLLPRLLGAQ-VIVDPEA--PSTVHLLP 208
Query: 137 EILAKTPNAYMLQ--QFENPANPKIHYETTGPELW 169
            ++  + N   +   QF N AN + H   T  E++
Sbjct: 209 RVMKDSKNEGFVHVNQFYNDANFEAHMRGTAREIF 243

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	206
1z7w_A	322	Cysteine synthase; transferase; HET: PLP; 2.20A {A	1e-144
3tbh_A	334	O-acetyl serine sulfhydrylase; cysteine synthase,	1e-142
4aec_A	430	Cysteine synthase, mitochondrial; lyase, cysteine	1e-142
2q3b_A	313	Cysteine synthase A; pyridoxal-5'-phosphate, sulph	1e-141
1ve1_A	304	O-acetylserine sulfhydrylase; PLP, transferase, ri	1e-135
1y7l_A	316	O-acetylserine sulfhydrylase, O-acetylserine (thio	1e-134
2egu_A	308	Cysteine synthase; O-acetylserine sulfhydrase, str	1e-134
2pqm_A	343	Cysteine synthase; OASS, PLP, lyase; HET: PLP; 1.8	1e-131
1o58_A	303	O-acetylserine sulfhydrylase; TM0665, structural g	1e-126
2v03_A	303	Cysteine synthase B; pyridoxal phosphate, cysteine	1e-125
3dwg_A	325	Cysteine synthase B; sulfur carrier protein comple	1e-122
1wkv_A	389	Cysteine synthase; homodimer, open alpha/beta fold	1e-112
3pc3_A	527	CG1753, isoform A; CBS, synthase, PLP, heme, amino	1e-111
1jbq_A	435	B, cystathionine beta-synthase, serine sulfhydrase	1e-110
1e5x_A	486	Threonine synthase; threonine biosynthesis, PLP en	4e-13
2zsj_A	352	Threonine synthase; PLP dependent enzyme, lyase; H	5e-13
2d1f_A	360	Threonine synthase; amino acid synthesis, pyridoxa	5e-13
3aey_A	351	Threonine synthase; PLP, pyridoxal phosphate, lyas	2e-12
1p5j_A	372	L-serine dehydratase; lyase; HET: PLP; 2.50A {Homo	1e-10
4d9i_A	398	Diaminopropionate ammonia-lyase; fold type II PLP-	7e-10
2rkb_A	318	Serine dehydratase-like; PLP bound enzyme, enzyme	1e-08
3ss7_X	442	D-serine dehydratase; type II fold, ALFA,beta-elim	4e-08
1ve5_A	311	Threonine deaminase; riken structural genomics/Pro	9e-08
1v71_A	323	Serine racemase, hypothetical protein C320.14 in c	2e-07
3iau_A	366	Threonine deaminase; pyridoxal phosphate, amino-ac	5e-07
1tdj_A	514	Biosynthetic threonine deaminase; allostery, coope	6e-07
3l6b_A	346	Serine racemase; pyridoxal phosphate, PLP, isomera	4e-06
2gn0_A	342	Threonine dehydratase catabolic; TDCB, biodegradat	8e-06

>1z7w_A Cysteine synthase; transferase; HET: PLP; 2.20A {Arabidopsis thaliana} SCOP: c.79.1.1 PDB: 1z7y_A* 2isq_A* Length = 322

 Score =  403 bits (1038), Expect = e-144
 Identities = 171/200 (85%), Positives = 184/200 (92%)

Query: 6   SNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGL 65
           S IAKDVTELIGNTPLVYLNN+  GCV R+AAKLEMMEPCSSVKDRIG+SMISDAE KGL
Sbjct: 3   SRIAKDVTELIGNTPLVYLNNVAEGCVGRVAAKLEMMEPCSSVKDRIGFSMISDAEKKGL 62

Query: 66  ITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPA 125
           I PGESVLIEPTSGNTG+GLAF AAAK Y+LIITMPASMS ERRIIL AFG ELVLTDPA
Sbjct: 63  IKPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERRIILLAFGVELVLTDPA 122

Query: 126 KGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGT 185
           KGMKGA+ KAEEILAKTPN YMLQQFENPANPKIHYETTGPE+WKG+GG+ID  VSGIGT
Sbjct: 123 KGMKGAIAKAEEILAKTPNGYMLQQFENPANPKIHYETTGPEIWKGTGGKIDGFVSGIGT 182

Query: 186 GGTITGAGKFLKEKNPNIKV 205
           GGTITGAGK+LKE+N N+K+
Sbjct: 183 GGTITGAGKYLKEQNANVKL 202

>3tbh_A O-acetyl serine sulfhydrylase; cysteine synthase, type II PLP dependent enzyme, serine ACET transferase; HET: LLP; 1.68A {Leishmania donovani} PDB: 3t4p_A* 3spx_A* 4air_A* Length = 334

 Score =  399 bits (1027), Expect = e-142
 Identities = 94/202 (46%), Positives = 141/202 (69%), Gaps = 1/202 (0%)

Query: 4   ESSNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAK 63
           +S N+A+ + +LIG TP +YLN + N   A++  K+E   P +SVKDR+G+++   AE +
Sbjct: 7   KSKNVAQSIDQLIGQTPALYLNKL-NNTKAKVVLKMECENPMASVKDRLGFAIYDKAEKE 65

Query: 64  GLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTD 123
           G + PG+S+++E +SGNTG+ LA + A + Y++IITMP SMSLERR +LR FGAE++LT 
Sbjct: 66  GKLIPGKSIVVESSSGNTGVSLAHLGAIRGYKVIITMPESMSLERRCLLRIFGAEVILTP 125

Query: 124 PAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGI 183
            A GMKGAV  A++I+A  PNA +  QF    N  IH ETTGPE+W+ +   +D  ++G+
Sbjct: 126 AALGMKGAVAMAKKIVAANPNAVLADQFATKYNALIHEETTGPEIWEQTNHNVDCFIAGV 185

Query: 184 GTGGTITGAGKFLKEKNPNIKV 205
           GTGGT+TG  + LK+   + ++
Sbjct: 186 GTGGTLTGVARALKKMGSHARI 207

>4aec_A Cysteine synthase, mitochondrial; lyase, cysteine synthesis, assimilatory sulfate reduction, S plant inorganic sulfur uptake; HET: PLP; 2.40A {Arabidopsis thaliana} Length = 430

 Score =  402 bits (1035), Expect = e-142
 Identities = 150/204 (73%), Positives = 180/204 (88%)

Query: 2   AVESSNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAE 61
             +  NIA +V++LIG TP+VYLN+I  GCVA IAAKLE+MEPC SVKDRIGYSM++DAE
Sbjct: 107 GPDGLNIADNVSQLIGKTPMVYLNSIAKGCVANIAAKLEIMEPCCSVKDRIGYSMVTDAE 166

Query: 62  AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVL 121
            KG I+PG+SVL+EPTSGNTGIGLAF+AA++ YRLI+TMPASMS+ERR++L+AFGAELVL
Sbjct: 167 QKGFISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVL 226

Query: 122 TDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVS 181
           TDPAKGM GAVQKAEEIL  TP+AYMLQQF+NPANPKIHYETTGPE+W  + G++D  V+
Sbjct: 227 TDPAKGMTGAVQKAEEILKNTPDAYMLQQFDNPANPKIHYETTGPEIWDDTKGKVDIFVA 286

Query: 182 GIGTGGTITGAGKFLKEKNPNIKV 205
           GIGTGGTITG G+F+KEKNP  +V
Sbjct: 287 GIGTGGTITGVGRFIKEKNPKTQV 310

>2q3b_A Cysteine synthase A; pyridoxal-5'-phosphate, sulphur metabolism, cysteine biosynthesis, transferase; HET: LLP; 1.80A {Mycobacterium tuberculosis} PDB: 2q3c_A* 2q3d_A* 3rr2_A Length = 313

 Score =  396 bits (1021), Expect = e-141
 Identities = 107/199 (53%), Positives = 146/199 (73%), Gaps = 1/199 (0%)

Query: 7   NIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLI 66
           +IA+D+T+LIG TPLV L  + +G VA I AKLE   P +SVKDRIG +M+  AE  GLI
Sbjct: 5   SIAEDITQLIGRTPLVRLRRVTDGAVADIVAKLEFFNPANSVKDRIGVAMLQAAEQAGLI 64

Query: 67  TPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAK 126
            P  ++++EPTSGNTGI LA + AA+ YR ++TMP +MSLERR++LRA+GAEL+LT  A 
Sbjct: 65  KPD-TIILEPTSGNTGIALAMVCAARGYRCVLTMPETMSLERRMLLRAYGAELILTPGAD 123

Query: 127 GMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTG 186
           GM GA+ KAEE+       ++ QQFENPANP IH  TT  E+W+ + G++D +V+G+GTG
Sbjct: 124 GMSGAIAKAEELAKTDQRYFVPQQFENPANPAIHRVTTAEEVWRDTDGKVDIVVAGVGTG 183

Query: 187 GTITGAGKFLKEKNPNIKV 205
           GTITG  + +KE+ P+ + 
Sbjct: 184 GTITGVAQVIKERKPSARF 202

>1ve1_A O-acetylserine sulfhydrylase; PLP, transferase, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.45A {Thermus thermophilus} SCOP: c.79.1.1 PDB: 2eco_A* 2ecq_A* 2efy_A* Length = 304

 Score =  380 bits (978), Expect = e-135
 Identities = 107/195 (54%), Positives = 140/195 (71%), Gaps = 2/195 (1%)

Query: 12  VTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPG-E 70
           V   IG TP+V L  +V   +A +  KLE + P  S+KDR  + MI DAE +G++ PG  
Sbjct: 3   VEGAIGKTPVVRLAKVVEPDMAEVWVKLEGLNPGGSIKDRPAWYMIKDAEERGILRPGSG 62

Query: 71  SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKG 130
            V++EPTSGNTGIGLA +AA++ YRLI+TMPA MS ER+ +L+AFGAELVLTDP + M  
Sbjct: 63  QVIVEPTSGNTGIGLAMIAASRGYRLILTMPAQMSEERKRVLKAFGAELVLTDPERRMLA 122

Query: 131 AVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTIT 190
           A ++A   L +   A+M  QF+NPAN + HYETTGPEL++   GRIDA V G GTGGTIT
Sbjct: 123 AREEALR-LKEELGAFMPDQFKNPANVRAHYETTGPELYEALEGRIDAFVYGSGTGGTIT 181

Query: 191 GAGKFLKEKNPNIKV 205
           G G++LKE+ P++KV
Sbjct: 182 GVGRYLKERIPHVKV 196

>1y7l_A O-acetylserine sulfhydrylase, O-acetylserine (thiol)-lyase; X-RAY crystallography, sulfhydrylase; HET: LLP; 1.55A {Haemophilus influenzae} SCOP: c.79.1.1 PDB: 3iqg_X* 3iqh_X* 3iqi_X* 1fcj_A* 1oas_A* 1d6s_A* Length = 316

 Score =  378 bits (974), Expect = e-134
 Identities = 101/201 (50%), Positives = 137/201 (68%), Gaps = 5/201 (2%)

Query: 7   NIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLI 66
            I  D +  IGNTPLV L +   G    +  K+E   P  SVK RIG +M+  AE  G +
Sbjct: 2   AIYADNSYSIGNTPLVRLKHF--GHNGNVVVKIEGRNPSYSVKCRIGANMVWQAEKDGTL 59

Query: 67  TPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAK 126
           T G   +++ TSGNTGI LA++AAA+ Y++ +TMP +MSLER+ +L   G  LVLT+ AK
Sbjct: 60  TKG-KEIVDATSGNTGIALAYVAAARGYKITLTMPETMSLERKRLLCGLGVNLVLTEGAK 118

Query: 127 GMKGAVQKAEEILAKTPNAY-MLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGT 185
           GMKGA+ KAEEI+A  P+ Y ML+QFENPANP+IH ETTGPE+WK + G++D +V+G+GT
Sbjct: 119 GMKGAIAKAEEIVASDPSRYVMLKQFENPANPQIHRETTGPEIWKDTDGKVDVVVAGVGT 178

Query: 186 GGTITGAGKFLK-EKNPNIKV 205
           GG+ITG  + +K +    I  
Sbjct: 179 GGSITGISRAIKLDFGKQITS 199

>2egu_A Cysteine synthase; O-acetylserine sulfhydrase, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; 1.90A {Geobacillus kaustophilus} Length = 308

 Score =  377 bits (971), Expect = e-134
 Identities = 113/200 (56%), Positives = 144/200 (72%), Gaps = 2/200 (1%)

Query: 6   SNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGL 65
           +     +TELIG+TP V LN IV+   A +  KLE M P SSVKDRI  +MI  AE  G 
Sbjct: 2   ARTVNSITELIGDTPAVKLNRIVDEDSADVYLKLEFMNPGSSVKDRIALAMIEAAEKAGK 61

Query: 66  ITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPA 125
           + PG   ++EPTSGNTGIGLA +AAAK Y+ ++ MP +MSLERR +LRA+GAELVLT  A
Sbjct: 62  LKPG-DTIVEPTSGNTGIGLAMVAAAKGYKAVLVMPDTMSLERRNLLRAYGAELVLTPGA 120

Query: 126 KGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGT 185
           +GM+GA+ KAEE L +    +M QQF+N ANP+IH  TTG E+ +  G ++DA V+G+GT
Sbjct: 121 QGMRGAIAKAEE-LVREHGYFMPQQFKNEANPEIHRLTTGKEIVEQMGDQLDAFVAGVGT 179

Query: 186 GGTITGAGKFLKEKNPNIKV 205
           GGTITGAGK L+E  PNIK+
Sbjct: 180 GGTITGAGKVLREAYPNIKI 199

>2pqm_A Cysteine synthase; OASS, PLP, lyase; HET: PLP; 1.86A {Entamoeba histolytica} PDB: 3bm5_A* Length = 343

 Score =  371 bits (956), Expect = e-131
 Identities = 86/210 (40%), Positives = 127/210 (60%), Gaps = 7/210 (3%)

Query: 1   MAVESSNIAKDVTELIGNTPLVYLNNIVNGCV----ARIAAKLEMMEPCSSVKDRIGYSM 56
           ++     I  ++ E IG TPLV L+ +          RI  KLE   P SSVKDR+G+++
Sbjct: 6   ISSPRKRIYHNILETIGGTPLVELHGVTEHPRIKKGTRILVKLEYFNPMSSVKDRVGFNI 65

Query: 57  ISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFG 116
           +  A   G + PG   +IE TSGNTGI L    A   YR+ I MP++MS+ER++I++AFG
Sbjct: 66  VYQAIKDGRLKPG-MEIIESTSGNTGIALCQAGAVFGYRVNIAMPSTMSVERQMIMKAFG 124

Query: 117 AELVLTDPAKGMKGAVQKAEEILAKTPNAY-MLQQFENPANPKIHYETTGPELWKGSGGR 175
           AEL+LT+  KGM GA+++  +++ + P  Y +  QF NP N   H+  T  E+W+ + G 
Sbjct: 125 AELILTEGKKGMPGAIEEVNKMIKENPGKYFVANQFGNPDNTAAHH-YTANEIWEDTDGE 183

Query: 176 IDALVSGIGTGGTITGAGKFLKEKNPNIKV 205
           +D +VS +GT GT+ G  + LKEK   IK+
Sbjct: 184 VDIVVSAVGTSGTVIGVAEKLKEKKKGIKI 213

>1o58_A O-acetylserine sulfhydrylase; TM0665, structural genomics, J protein structure initiative, joint center for structural G transferase; 1.80A {Thermotoga maritima} SCOP: c.79.1.1 PDB: 3fca_A* Length = 303

 Score =  358 bits (921), Expect = e-126
 Identities = 96/201 (47%), Positives = 130/201 (64%), Gaps = 9/201 (4%)

Query: 6   SNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGL 65
            +    +  LIG+TP+V L++I     +RI  KLE   P  SVKDR    MI DAE +GL
Sbjct: 8   HHHHHMMERLIGSTPIVRLDSID----SRIFLKLEKNNPGGSVKDRPALFMILDAEKRGL 63

Query: 66  ITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPA 125
           +  G   ++EPTSGN GI +A + A + +R+I+TMP +MS+ERR +L+  GAELVLT   
Sbjct: 64  LKNG---IVEPTSGNMGIAIAMIGAKRGHRVILTMPETMSVERRKVLKMLGAELVLTPGE 120

Query: 126 KGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGT 185
            GMKGAV+KA E +++   A+ML QFENP N   H  TTGPE+ K    +IDA V+G+GT
Sbjct: 121 LGMKGAVEKALE-ISRETGAHMLNQFENPYNVYSHQFTTGPEILKQMDYQIDAFVAGVGT 179

Query: 186 GGTITGAGKFLKEK-NPNIKV 205
           GGTI+G G+ LK      +K+
Sbjct: 180 GGTISGVGRVLKGFFGNGVKI 200

>2v03_A Cysteine synthase B; pyridoxal phosphate, cysteine biosynthesis, transferase, ENZ kinetics, enzymatic sythesis of novel compounds; HET: LLP CIT; 1.33A {Escherichia coli} PDB: 2bhs_A* 2bht_A* 2jc3_A* Length = 303

 Score =  355 bits (913), Expect = e-125
 Identities = 94/195 (48%), Positives = 124/195 (63%), Gaps = 2/195 (1%)

Query: 11  DVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGE 70
            + + IGNTPLV L  +     + +  KLE   P  SVKDR   SMI +AE +G I PG 
Sbjct: 3   TLEQTIGNTPLVKLQRMGPDNGSEVWLKLEGNNPAGSVKDRAALSMIVEAEKRGEIKPG- 61

Query: 71  SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKG 130
            VLIE TSGNTGI LA +AA K YR+ + MP +MS ERR  +RA+GAEL+L    +GM+G
Sbjct: 62  DVLIEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERRAAMRAYGAELILVTKEQGMEG 121

Query: 131 AVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTIT 190
           A   A E+  +     +L QF NP NP  HY TTGPE+W+ +GGRI   VS +GT GTIT
Sbjct: 122 ARDLALEMANRGEG-KLLDQFNNPDNPYAHYTTTGPEIWQQTGGRITHFVSSMGTTGTIT 180

Query: 191 GAGKFLKEKNPNIKV 205
           G  +F++E++  + +
Sbjct: 181 GVSRFMREQSKPVTI 195

>3dwg_A Cysteine synthase B; sulfur carrier protein complex, beta-grAsp fold, amino-acid biosynthesis; HET: PLP; 1.53A {Mycobacterium tuberculosis} PDB: 3fgp_A* 3dki_A* 3dwi_A* Length = 325

 Score =  349 bits (897), Expect = e-122
 Identities = 88/206 (42%), Positives = 118/206 (57%), Gaps = 9/206 (4%)

Query: 7   NIAKDVTELIGNTPLVYLNNIV-------NGCVARIAAKLEMMEPCSSVKDRIGYSMISD 59
                + + +GNTPLV L  +        +G   R+ AKLE   P  S+KDR    MI  
Sbjct: 4   TRYDSLLQALGNTPLVGLQRLSPRWDDGRDGPHVRLWAKLEDRNPTGSIKDRPAVRMIEQ 63

Query: 60  AEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAEL 119
           AEA GL+ PG + ++EPTSGNTGI LA  A  K YRLI  MP + S+ERR +L  +GA++
Sbjct: 64  AEADGLLRPG-ATILEPTSGNTGISLAMAARLKGYRLICVMPENTSVERRQLLELYGAQI 122

Query: 120 VLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDAL 179
           + +    G   AV  A+E+ A  P+  ML Q+ NPAN   HY  TGPEL       I   
Sbjct: 123 IFSAAEGGSNTAVATAKELAATNPSWVMLYQYGNPANTDSHYCGTGPELLADL-PEITHF 181

Query: 180 VSGIGTGGTITGAGKFLKEKNPNIKV 205
           V+G+GT GT+ G G+FL+E   N+K+
Sbjct: 182 VAGLGTTGTLMGTGRFLREHVANVKI 207

>1wkv_A Cysteine synthase; homodimer, open alpha/beta folding, transferase; HET: PLP; 2.00A {Aeropyrum pernix} SCOP: c.79.1.1 Length = 389

 Score =  325 bits (834), Expect = e-112
 Identities = 51/199 (25%), Positives = 90/199 (45%), Gaps = 9/199 (4%)

Query: 11  DVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCS-SVKDRIGYSMISDAEAKGLITPG 69
           D  E    TPLV    +      R+  KLE   P S SVKDR    +IS    +  +  G
Sbjct: 89  DFFERGKPTPLVRSR-LQLPNGVRVWLKLEWYNPFSLSVKDRPAVEIISRLSRR--VEKG 145

Query: 70  ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMK 129
            S++ + TS N G+ L+ +A    YR  + +P +     +++ R  GA++++   A    
Sbjct: 146 -SLVADATSSNFGVALSAVARLYGYRARVYLPGAAEEFGKLLPRLLGAQVIVDPEAPSTV 204

Query: 130 GAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWK---GSGGRIDALVSGIGTG 186
             + +  +  +K      + QF N AN + H   T  E++      G  +  +   +GT 
Sbjct: 205 HLLPRVMK-DSKNEGFVHVNQFYNDANFEAHMRGTAREIFVQSRRGGLALRGVAGSLGTS 263

Query: 187 GTITGAGKFLKEKNPNIKV 205
           G ++ A  +L+  +P+I+ 
Sbjct: 264 GHMSAAAFYLQSVDPSIRA 282

>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A* Length = 527

 Score =  326 bits (839), Expect = e-111
 Identities = 87/204 (42%), Positives = 123/204 (60%), Gaps = 6/204 (2%)

Query: 7   NIAKDVTELIGNTPLVYLNNIV--NGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKG 64
            I  ++ E+IG TPLV LNNI   +G    + AK E + P  SVKDRIGY M+ DAE +G
Sbjct: 49  QITPNILEVIGCTPLVKLNNIPASDGIECEMYAKCEFLNPGGSVKDRIGYRMVQDAEEQG 108

Query: 65  LITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTD- 123
           L+ PG   +IEPTSGNTGIGLA   A K Y+ II MP  MS E+   LR  GA+++ T  
Sbjct: 109 LLKPG-YTIIEPTSGNTGIGLAMACAVKGYKCIIVMPEKMSNEKVSALRTLGAKIIRTPT 167

Query: 124 --PAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVS 181
                  +G +  A+++  +TPN+ +L Q+ N  NP  HY+ T  E+      ++D +V 
Sbjct: 168 EAAYDSPEGLIYVAQQLQRETPNSIVLDQYRNAGNPLAHYDGTAAEILWQLDNKVDMIVV 227

Query: 182 GIGTGGTITGAGKFLKEKNPNIKV 205
             GT GTI+G G+ +KE+ P+ ++
Sbjct: 228 SAGTAGTISGIGRKIKEQVPSCQI 251

>1jbq_A B, cystathionine beta-synthase, serine sulfhydrase; fold type II of PLP enzymes, lyase; HET: HEM PLP; 2.60A {Homo sapiens} SCOP: c.79.1.1 PDB: 1m54_A* Length = 435

 Score =  321 bits (826), Expect = e-110
 Identities = 90/204 (44%), Positives = 120/204 (58%), Gaps = 6/204 (2%)

Query: 7   NIAKDVTELIGNTPLVYLNNIV--NGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKG 64
            I  D+ + IG+TP+V +N I    G    + AK E      SVKDRI   MI DAE  G
Sbjct: 97  KILPDILKKIGDTPMVRINKIGKKFGLKCELLAKCEFFNAGGSVKDRISLRMIEDAERDG 156

Query: 65  LITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTD- 123
            + PG   +IEPTSGNTGIGLA  AA + YR II MP  MS E+  +LRA GAE+V T  
Sbjct: 157 TLKPG-DTIIEPTSGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDVLRALGAEIVRTPT 215

Query: 124 --PAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVS 181
                  +  V  A  +  + PN+++L Q+ N +NP  HY+TT  E+ +   G++D LV+
Sbjct: 216 NARFDSPESHVGVAWRLKNEIPNSHILDQYRNASNPLAHYDTTADEILQQCDGKLDMLVA 275

Query: 182 GIGTGGTITGAGKFLKEKNPNIKV 205
            +GTGGTITG  + LKEK P  ++
Sbjct: 276 SVGTGGTITGIARKLKEKCPGCRI 299

>1e5x_A Threonine synthase; threonine biosynthesis, PLP enzyme, S-adenosyl-methionine, allostery; 2.25A {Arabidopsis thaliana} SCOP: c.79.1.1 PDB: 2c2b_A* 2c2g_A* Length = 486

 Score = 66.0 bits (161), Expect = 4e-13
 Identities = 31/184 (16%), Positives = 62/184 (33%), Gaps = 13/184 (7%)

Query: 17  GNTPLVYLNNIVN--GCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLI 74
           GN+ L +          +  +  K   +    S KD     ++S       +      + 
Sbjct: 129 GNSNLFWAERFGKQFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMKRPVVGVG 188

Query: 75  EPTSGNTGIGLAFMAAAKQYRLIITMPA-SMSLERRIILRAFGAELVLTDPAKGMKGAVQ 133
             ++G+T   L+   A+     I+ +PA  +S+ + +   A GA ++  D          
Sbjct: 189 CASTGDTSAALSAYCASAGIPSIVFLPANKISMAQLVQPIANGAFVLSID---TDFDGCM 245

Query: 134 KAEEILAKTPNAYMLQQFENPANPKIH--YETTGPELWKGSGGRI-DALVSGIGTGGTIT 190
           K    +      Y+     N  N       +T   E+ +    ++ D ++   G  G I 
Sbjct: 246 KLIREITAELPIYLA----NSLNSLRLEGQKTAAIEILQQFDWQVPDWVIVPGGNLGNIY 301

Query: 191 GAGK 194
              K
Sbjct: 302 AFYK 305

>2zsj_A Threonine synthase; PLP dependent enzyme, lyase; HET: PLP; 1.80A {Aquifex aeolicus} Length = 352

 Score = 65.8 bits (161), Expect = 5e-13
 Identities = 44/187 (23%), Positives = 68/187 (36%), Gaps = 17/187 (9%)

Query: 17  GNTPLVYLNNIVN--GCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLI 74
           GNTPL+  +N+    G   +I  K E + P  S KDR     IS A   G        +I
Sbjct: 29  GNTPLIEADNLARAIGFKGKIYLKYEGLNPTGSFKDRGMTLAISKAVEAGK-----RAVI 83

Query: 75  EPTSGNTGIGLAFMAAAKQYRLIITMPASM-SLERRIILRAFGAELVLTDPAKGMKGAVQ 133
             ++GNT    A  AA    R  + +P    ++ +      +GA+++      G      
Sbjct: 84  CASTGNTSASAAAYAARAGLRAYVLLPKGAVAIGKLSQAMIYGAKVLAIQ---GTFDDAL 140

Query: 134 KAEEILAKTPNAYMLQQFENPANPKIH--YETTGPELWKGSGGRIDALVSGIGTGGTITG 191
                + +     ++    N  NP      +T   E+    G   D     +G  G IT 
Sbjct: 141 NIVRKIGENFPVEIV----NSVNPYRIEGQKTAAFEICDTLGEAPDYHFIPVGNAGNITA 196

Query: 192 AGKFLKE 198
             K  K 
Sbjct: 197 YWKGFKI 203

>2d1f_A Threonine synthase; amino acid synthesis, pyridoxal-5'-phosphate, PLP, lyase; HET: PLP; 2.50A {Mycobacterium tuberculosis} Length = 360

 Score = 65.8 bits (161), Expect = 5e-13
 Identities = 43/185 (23%), Positives = 71/185 (38%), Gaps = 14/185 (7%)

Query: 17  GNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEP 76
           G TPL+   N+       I  K+E + P  S KDR     ++DA A G        ++  
Sbjct: 37  GGTPLIAATNLSKQTGCTIHLKVEGLNPTGSFKDRGMTMAVTDALAHGQ-----RAVLCA 91

Query: 77  TSGNTGIGLAFMAAAKQYRLIITMPAS-MSLERRIILRAFGAELVLTDPAKGMKGAVQKA 135
           ++GNT    A  AA       + +P   +++ +       GA+++  D        ++ A
Sbjct: 92  STGNTSASAAAYAARAGITCAVLIPQGKIAMGKLAQAVMHGAKIIQID--GNFDDCLELA 149

Query: 136 EEILAKTPNAYMLQQFENPANPKIH--YETTGPELWKGSGGRIDALVSGIGTGGTITGAG 193
            ++ A  P   ++    N  NP      +T   E+    G   D     +G  G IT   
Sbjct: 150 RKMAADFPTISLV----NSVNPVRIEGQKTAAFEIVDVLGTAPDVHALPVGNAGNITAYW 205

Query: 194 KFLKE 198
           K   E
Sbjct: 206 KGYTE 210

>3aey_A Threonine synthase; PLP, pyridoxal phosphate, lyase; 1.92A {Thermus thermophilus} PDB: 1uin_A* 1uim_A* 3aex_A* 1v7c_A Length = 351

 Score = 63.4 bits (155), Expect = 2e-12
 Identities = 43/187 (22%), Positives = 65/187 (34%), Gaps = 17/187 (9%)

Query: 17  GNTPLVYLNNIVNGCV--ARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLI 74
           G+TPL+ L           R+ AK E + P  S KDR     +S A   G        + 
Sbjct: 27  GSTPLIPLKGPEEARKKGIRLYAKYEGLNPTGSFKDRGMTLAVSKAVEGGA-----QAVA 81

Query: 75  EPTSGNTGIGLAFMAAAKQYRLIITMPASM-SLERRIILRAFGAELVLTDPAKGMKGAVQ 133
             ++GNT    A  AA      I+ +PA   +L +       GA +V  +   G      
Sbjct: 82  CASTGNTAASAAAYAARAGILAIVVLPAGYVALGKVAQSLVHGARIVQVE---GNFDDAL 138

Query: 134 KAEEILAKTPNAYMLQQFENPANPKIH--YETTGPELWKGSGGRIDALVSGIGTGGTITG 191
           +  + L +     ++    N  NP      +T   E+    G         +G  G IT 
Sbjct: 139 RLTQKLTEAFPVALV----NSVNPHRLEGQKTLAFEVVDELGDAPHYHALPVGNAGNITA 194

Query: 192 AGKFLKE 198
                K 
Sbjct: 195 HWMGYKA 201

>1p5j_A L-serine dehydratase; lyase; HET: PLP; 2.50A {Homo sapiens} SCOP: c.79.1.1 PDB: 1pwh_A* 1pwe_A* Length = 372

 Score = 58.8 bits (143), Expect = 1e-10
 Identities = 36/214 (16%), Positives = 68/214 (31%), Gaps = 35/214 (16%)

Query: 6   SNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMI---SDAEA 62
           S        L   TP+     +       +  K++  +P  S K R         +    
Sbjct: 34  SEFMMSGEPLHVKTPIRDSMALSKMAGTSVYLKMDSAQPSGSFKIRGIGHFCKRWAKQGC 93

Query: 63  KGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLT 122
              +          ++GN G+  A+ A        I +P +        L+  GA   + 
Sbjct: 94  AHFVCS--------SAGNAGMAAAYAARQLGVPATIVVPGTTPALTIERLKNEGATCKVV 145

Query: 123 ----DPAKGMKGAVQKAEEILAKTPNAYMLQQFENP------ANPKIHYETTGPELWKGS 172
               D A       + A+ +    P    +  F++P      A       +   EL +  
Sbjct: 146 GELLDEAF------ELAKALAKNNPGWVYIPPFDDPLIWEGHA-------SIVKELKETL 192

Query: 173 GGRIDALVSGIGTGGTITGAGKFLKE-KNPNIKV 205
             +  A+   +G GG + G  + L+E    ++ V
Sbjct: 193 WEKPGAIALSVGGGGLLCGVVQGLQECGWGDVPV 226

>4d9i_A Diaminopropionate ammonia-lyase; fold type II PLP-dependent enzyme, tryptophan synthase beta like PLP-dependent enzymes superfamily; HET: IT1; 2.00A {Escherichia coli} PDB: 4d9g_A* 4d9n_A* 4d9k_A* 4d9m_A* Length = 398

 Score = 56.7 bits (137), Expect = 7e-10
 Identities = 41/214 (19%), Positives = 68/214 (31%), Gaps = 30/214 (14%)

Query: 19  TPLVYLNNIVNGC-VARIAAKLEMM--------------EPCSSVKDRIGYSM-ISDAEA 62
           TPL  L+++ N   V +I  K E                     + ++    +     E 
Sbjct: 45  TPLCALDDLANLFGVKKILVKDESKRFGLNAFXMLGGAYAIAQLLCEKYHLDIETLSFEH 104

Query: 63  KGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLT 122
                  +      T GN G G+A+ A       +I MP   + ER   +   GAE ++T
Sbjct: 105 LKNAIGEKMTFATTTDGNHGRGVAWAAQQLGQNAVIYMPKGSAQERVDAILNLGAECIVT 164

Query: 123 DPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIH------YETTGPELW---KGSG 173
           D        V+   +  A+     ++Q        KI       Y T   E     +  G
Sbjct: 165 DMNYDD--TVRLTMQ-HAQQHGWEVVQDTAWEGYTKIPTWIMQGYATLADEAVEQMREMG 221

Query: 174 GRIDALVSGIGTGGTITGAGKFLKE--KNPNIKV 205
                ++   G G    G   +L +     N+  
Sbjct: 222 VTPTHVLLQAGVGAMAGGVLGYLVDVYSPQNLHS 255

>2rkb_A Serine dehydratase-like; PLP bound enzyme, enzyme found in human cells, lyase, pyridoxal phosphate; HET: PLP; 2.80A {Homo sapiens} Length = 318

 Score = 52.9 bits (128), Expect = 1e-08
 Identities = 45/205 (21%), Positives = 70/205 (34%), Gaps = 36/205 (17%)

Query: 15  LIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMI---SDAEAKGLITPGES 71
               TPL+    +       +  K E ++P  S K R         +    + L+     
Sbjct: 4   FHVVTPLLESWALSQVAGMPVFLKCENVQPSGSFKIRGIGHFCQEMAKKGCRHLVCS--- 60

Query: 72  VLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLT----DPAKG 127
                + GN GI  A+ A        I +P S SL+    L+  GAE+ LT    D A  
Sbjct: 61  -----SGGNAGIAAAYAARKLGIPATIVLPESTSLQVVQRLQGEGAEVQLTGKVWDEAN- 114

Query: 128 MKGAVQKAEEILAKTPNAYMLQQFENP------ANPKIHYETTGPELWKGSGGRIDALV- 180
                 +A+E LAK      +  F++P      A       +   EL         ALV 
Sbjct: 115 -----LRAQE-LAKRDGWENVPPFDHPLIWKGHA-------SLVQELKAVLRTPPGALVL 161

Query: 181 SGIGTGGTITGAGKFLKEKNPNIKV 205
           +  G G         L+    ++ +
Sbjct: 162 AVGGGGLLAGVVAGLLEVGWQHVPI 186

>3ss7_X D-serine dehydratase; type II fold, ALFA,beta-elimination, P 5'-phosphate, lyase; HET: PLP; 1.55A {Escherichia coli} PDB: 3ss9_X* 3r0x_A* 3r0z_A Length = 442

 Score = 51.7 bits (124), Expect = 4e-08
 Identities = 35/183 (19%), Positives = 64/183 (34%), Gaps = 16/183 (8%)

Query: 32  VARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAA 91
           V   A KL +     ++ D   YS +   E K      +  +   ++GN G+ +  M+A 
Sbjct: 126 VLAHAEKLALEAGLLTLDD--DYSKLLSPEFKQFF--SQYSIAVGSTGNLGLSIGIMSAR 181

Query: 92  KQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQF 151
             +++ + M A     ++  LR+ G  +V  +  +    AV++  +     PN +     
Sbjct: 182 IGFKVTVHMSADARAWKKAKLRSHGVTVVEYE--QDYGVAVEEGRKAAQSDPNCF-FIDD 238

Query: 152 ENPANPKIHYETTGPEL--------WKGSGGRIDALVSGIGTGGTITGAGKFLKEK-NPN 202
           EN     + Y   G  L                  +    G GG   G    LK     +
Sbjct: 239 ENSRTLFLGYSVAGQRLKAQFAQQGRIVDADNPLFVYLPCGVGGGPGGVAFGLKLAFGDH 298

Query: 203 IKV 205
           +  
Sbjct: 299 VHC 301

>1ve5_A Threonine deaminase; riken structural genomics/Pro initiative, RSGI, structural genomics, lyase; HET: PLP; 2.15A {Thermus thermophilus} SCOP: c.79.1.1 Length = 311

 Score = 50.2 bits (121), Expect = 9e-08
 Identities = 49/214 (22%), Positives = 81/214 (37%), Gaps = 42/214 (19%)

Query: 9   AKDVTELIGNTPLVY---LNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAE-AKG 64
            + +      TPL+    L+ ++     R+  K E ++   S K R   S     E  KG
Sbjct: 11  FRRIAPYTHRTPLLTSRLLDGLLG---KRLLLKAEHLQKTGSFKARGALSKALALENPKG 67

Query: 65  LITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDP 124
           L+          +SGN   G+A+ A     + ++ MP   S  ++   RA+GAE+V    
Sbjct: 68  LLAV--------SSGNHAQGVAYAAQVLGVKALVVMPEDASPYKKACARAYGAEVVDRGV 119

Query: 125 AKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIH-YE---------TTGPELW---KG 171
               K   + A  +  +T  A             IH ++         T G EL      
Sbjct: 120 T--AKNREEVARALQEETGYAL------------IHPFDDPLVIAGQGTAGLELLAQAGR 165

Query: 172 SGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKV 205
            G    A+++ +G GG + G    +K  +P   V
Sbjct: 166 MGVFPGAVLAPVGGGGLLAGLATAVKALSPTTLV 199

>1v71_A Serine racemase, hypothetical protein C320.14 in chromosome III; dimer, PLP, isomerase; HET: PLP; 1.70A {Schizosaccharomyces pombe} SCOP: c.79.1.1 PDB: 1wtc_A* 2zpu_A* 2zr8_A* Length = 323

 Score = 49.0 bits (118), Expect = 2e-07
 Identities = 40/207 (19%), Positives = 75/207 (36%), Gaps = 43/207 (20%)

Query: 16  IGNTPLVY---LNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMI---SDAE-AKGLITP 68
              TP++    +N       A +  K E  +   + K R   + +   ++A+   G++T 
Sbjct: 24  ANKTPVLTSSTVNKEFV---AEVFFKCENFQKMGAFKFRGALNALSQLNEAQRKAGVLTF 80

Query: 69  GESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGM 128
                   +SGN    +A  A        I MP      +    + +G ++++ D     
Sbjct: 81  --------SSGNHAQAIALSAKILGIPAKIIMPLDAPEAKVAATKGYGGQVIMYDRY--K 130

Query: 129 KGAVQKAEEILAKTPNAYMLQQFENPANPKIH-YE---------TTGPELWKGSGGRIDA 178
               + A+EI  +                 I  Y+         T   EL++   G +DA
Sbjct: 131 DDREKMAKEISEREGLTI------------IPPYDHPHVLAGQGTAAKELFE-EVGPLDA 177

Query: 179 LVSGIGTGGTITGAGKFLKEKNPNIKV 205
           L   +G GG ++G+    +   PN +V
Sbjct: 178 LFVCLGGGGLLSGSALAARHFAPNCEV 204

>3iau_A Threonine deaminase; pyridoxal phosphate, amino-acid biosynthesis, defensive PROT jasmonic acid pathway, jasmonic acid,structural genomics; HET: LLP 15P; 2.35A {Solanum lycopersicum} Length = 366

 Score = 48.0 bits (115), Expect = 5e-07
 Identities = 50/208 (24%), Positives = 79/208 (37%), Gaps = 37/208 (17%)

Query: 12  VTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMI---SDAE-AKGLIT 67
           V ++   +PL     + +        K E  +   S K R  Y+M+   S  E  KG+IT
Sbjct: 54  VYDVAIESPLELAEKLSDRLGVNFYIKREDKQRVFSFKLRGAYNMMSNLSREELDKGVIT 113

Query: 68  PGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLT----D 123
                    ++GN   G+A           I MP +    +   +RA G ++VL     D
Sbjct: 114 --------ASAGNHAQGVALAGQRLNCVAKIVMPTTTPQIKIDAVRALGGDVVLYGKTFD 165

Query: 124 PAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYE------TTGPELWKGSGGRID 177
            A+        A E L++      +  F++P              T G E+ +     I 
Sbjct: 166 EAQ------THALE-LSEKDGLKYIPPFDDP-------GVIKGQGTIGTEINR-QLKDIH 210

Query: 178 ALVSGIGTGGTITGAGKFLKEKNPNIKV 205
           A+   +G GG I G   F K+  PN K+
Sbjct: 211 AVFIPVGGGGLIAGVATFFKQIAPNTKI 238

>1tdj_A Biosynthetic threonine deaminase; allostery, cooperative, tetramer, regulation, pyridoxal PHOS isoleucine biosynthesis; HET: PLP; 2.80A {Escherichia coli} SCOP: c.79.1.1 d.58.18.2 d.58.18.2 Length = 514

 Score = 48.0 bits (115), Expect = 6e-07
 Identities = 54/208 (25%), Positives = 87/208 (41%), Gaps = 37/208 (17%)

Query: 12  VTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMI---SDAE-AKGLIT 67
           V E    TPL  +  + +     I  K E  +P  S K R  Y+M+   ++ + A G+IT
Sbjct: 25  VYEAAQVTPLQKMEKLSSRLDNVILVKREDRQPVHSFKLRGAYAMMAGLTEEQKAHGVIT 84

Query: 68  PGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLT----D 123
                    ++GN   G+AF +A    + +I MP + +  +   +R FG E++L     D
Sbjct: 85  A--------SAGNHAQGVAFSSARLGVKALIVMPTATADIKVDAVRGFGGEVLLHGANFD 136

Query: 124 PAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYE------TTGPELWKGSGGRID 177
            AK       KA E L++      +  F++P              T   EL +     +D
Sbjct: 137 EAK------AKAIE-LSQQQGFTWVPPFDHP-------MVIAGQGTLALELLQ-QDAHLD 181

Query: 178 ALVSGIGTGGTITGAGKFLKEKNPNIKV 205
            +   +G GG   G    +K+  P IKV
Sbjct: 182 RVFVPVGGGGLAAGVAVLIKQLMPQIKV 209

>3l6b_A Serine racemase; pyridoxal phosphate, PLP, isomerase; HET: PLP; 1.50A {Homo sapiens} PDB: 3l6r_A* 3hmk_A* 3l6c_A* Length = 346

 Score = 45.2 bits (108), Expect = 4e-06
 Identities = 42/203 (20%), Positives = 81/203 (39%), Gaps = 38/203 (18%)

Query: 19  TPLVY---LNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMIS-------DAEAKGLITP 68
           TP++    LN +       +  K E+ +   S K R   + +        + + K ++T 
Sbjct: 26  TPVLTSSILNQLTG---RNLFFKCELFQKTGSFKIRGALNAVRSLVPDALERKPKAVVTH 82

Query: 69  GESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGM 128
                   +SGN G  L + A  +     I +P +    +++ ++A+GA +V  +P+   
Sbjct: 83  --------SSGNHGQALTYAAKLEGIPAYIVVPQTAPDCKKLAIQAYGASIVYCEPS--D 132

Query: 129 KGAVQKAEEILAKTPNAYMLQQFENPANPKIHYE------TTGPELWKGSGGRIDALVSG 182
           +     A+ +  +T    M+   + P              T   E+       +DALV  
Sbjct: 133 ESRENVAKRVTEET-EGIMVHPNQEP-------AVIAGQGTIALEVLNQVPL-VDALVVP 183

Query: 183 IGTGGTITGAGKFLKEKNPNIKV 205
           +G GG + G    +K   P++KV
Sbjct: 184 VGGGGMLAGIAITVKALKPSVKV 206

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	206
3vc3_A	344	Beta-cyanoalnine synthase; beta-cyanoalanine synth	100.0
4aec_A	430	Cysteine synthase, mitochondrial; lyase, cysteine	100.0
1z7w_A	322	Cysteine synthase; transferase; HET: PLP; 2.20A {A	100.0
3tbh_A	334	O-acetyl serine sulfhydrylase; cysteine synthase,	100.0
3dwg_A	325	Cysteine synthase B; sulfur carrier protein comple	100.0
2v03_A	303	Cysteine synthase B; pyridoxal phosphate, cysteine	100.0
1y7l_A	316	O-acetylserine sulfhydrylase, O-acetylserine (thio	100.0
2q3b_A	313	Cysteine synthase A; pyridoxal-5'-phosphate, sulph	100.0
2pqm_A	343	Cysteine synthase; OASS, PLP, lyase; HET: PLP; 1.8	100.0
2egu_A	308	Cysteine synthase; O-acetylserine sulfhydrase, str	100.0
1ve1_A	304	O-acetylserine sulfhydrylase; PLP, transferase, ri	100.0
1jbq_A	435	B, cystathionine beta-synthase, serine sulfhydrase	100.0
3l6b_A	346	Serine racemase; pyridoxal phosphate, PLP, isomera	100.0
3pc3_A	527	CG1753, isoform A; CBS, synthase, PLP, heme, amino	100.0
4h27_A	364	L-serine dehydratase/L-threonine deaminase; PLP de	100.0
1o58_A	303	O-acetylserine sulfhydrylase; TM0665, structural g	100.0
1p5j_A	372	L-serine dehydratase; lyase; HET: PLP; 2.50A {Homo	100.0
2gn0_A	342	Threonine dehydratase catabolic; TDCB, biodegradat	100.0
2rkb_A	318	Serine dehydratase-like; PLP bound enzyme, enzyme	100.0
1ve5_A	311	Threonine deaminase; riken structural genomics/Pro	100.0
1v71_A	323	Serine racemase, hypothetical protein C320.14 in c	100.0
1tdj_A	514	Biosynthetic threonine deaminase; allostery, coope	100.0
3iau_A	366	Threonine deaminase; pyridoxal phosphate, amino-ac	100.0
2d1f_A	360	Threonine synthase; amino acid synthesis, pyridoxa	100.0
3aey_A	351	Threonine synthase; PLP, pyridoxal phosphate, lyas	100.0
2zsj_A	352	Threonine synthase; PLP dependent enzyme, lyase; H	100.0
3ss7_X	442	D-serine dehydratase; type II fold, ALFA,beta-elim	100.0
1f2d_A	341	1-aminocyclopropane-1-carboxylate deaminase; carbo	100.0
1j0a_A	325	1-aminocyclopropane-1-carboxylate deaminase; PLP d	100.0
4d9b_A	342	D-cysteine desulfhydrase; fold type II PLP-depende	100.0
1wkv_A	389	Cysteine synthase; homodimer, open alpha/beta fold	100.0
4d9i_A	398	Diaminopropionate ammonia-lyase; fold type II PLP-	100.0
1tzj_A	338	ACC deaminase, 1-aminocyclopropane-1-carboxylate d	100.0
1v8z_A	388	Tryptophan synthase beta chain 1; beta+alpha, rike	100.0
1x1q_A	418	Tryptophan synthase beta chain; structural genomic	100.0
1qop_B	396	Tryptophan synthase beta chain; lyase, carbon-oxyg	100.0
1e5x_A	486	Threonine synthase; threonine biosynthesis, PLP en	100.0
2o2e_A	422	Tryptophan synthase beta chain; amino-acid biosynt	100.0
1vb3_A	428	Threonine synthase; PLP-dependent enzyme, lyase; H	100.0
4f4f_A	468	Threonine synthase; structural genomics, niaid, na	100.0
1kl7_A	514	Threonine synthase; threonine synthesis, pyridoxal	99.98
3v7n_A	487	Threonine synthase; ssgcid, structural genomics, s	99.97
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	95.98
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	94.22
1vp8_A	201	Hypothetical protein AF0103; putative pyruvate kin	94.19
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	94.02
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	94.0
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	93.62
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	93.41
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	93.25
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	93.17
3c85_A	183	Putative glutathione-regulated potassium-efflux S	92.87
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	92.86
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	92.82
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	92.7
4eye_A	342	Probable oxidoreductase; structural genomics, niai	92.64
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	92.48
3gms_A	340	Putative NADPH:quinone reductase; structural genom	92.25
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	92.23
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	92.1
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	92.08
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	92.04
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	91.96
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	91.94
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	91.88
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	91.74
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	91.46
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	91.41
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	91.39
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	91.36
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	91.28
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	91.07
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	90.89
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	90.89
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	90.75
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	90.74
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	90.73
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	90.68
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	90.55
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	90.47
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	90.36
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	90.22
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	90.08
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	90.05
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	90.05
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	90.03
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	89.85
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	89.74
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	89.67
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	89.65
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	89.64
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	89.54
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	89.32
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	89.26
1t57_A	206	Conserved protein MTH1675; structural genomics, FM	89.24
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	89.13
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	89.12
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	89.12
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	88.9
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	88.83
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	88.72
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	88.72
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	88.66
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	88.18
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	88.0
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	88.0
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	87.9
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	87.87
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	87.59
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	87.56
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	87.5
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	87.47
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	87.16
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	86.97
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	86.8
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	86.76
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	86.71
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	86.61
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	86.47
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	86.44
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	86.44
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	86.34
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	86.26
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	86.14
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	86.06
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	85.95
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	85.77
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	85.77
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	85.74
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	85.35
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	85.06
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	85.06
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	85.06
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	85.03
3tpf_A	307	Otcase, ornithine carbamoyltransferase; structural	85.0
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	84.9
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	84.88
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	84.88
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	84.83
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	84.5
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	84.34
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	84.01
1c1d_A	355	L-phenylalanine dehydrogenase; amino acid dehydrog	83.89
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	83.85
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	83.79
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	83.7
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	83.69
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	83.59
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	83.57
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	83.36
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	83.3
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	83.24
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	83.19
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	83.14
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	83.14
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	83.13
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	82.92
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	82.92
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	82.9
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	82.86
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	82.84
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	82.77
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	82.75
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	82.73
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	82.47
4ekn_B	306	Aspartate carbamoyltransferase; atcase, aspartate	82.32
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	82.31
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	82.22
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	82.19
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	82.18
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	82.05
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	82.03
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	82.01
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	81.82
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	81.71
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	81.6
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	81.58
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	81.44
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	81.33
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	81.31
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	81.26
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	81.19
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	81.09
1pvv_A	315	Otcase, ornithine carbamoyltransferase; dodecamer;	81.07
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	80.85
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	80.51
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	80.48
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	80.46
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	80.45
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	80.24
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	80.23
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	80.23
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	80.17
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	80.11
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	80.03

>3vc3_A Beta-cyanoalnine synthase; beta-cyanoalanine synthase, transferase; HET: C6P; 1.77A {Glycine max} PDB: 3vbe_A*

Probab=100.00  E-value=1.6e-54  Score=369.28  Aligned_cols=201  Identities=61%  Similarity=1.050  Sum_probs=188.9

Q ss_pred             cchhhhhhccccCCcceecccccCCCCceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHH
Q 028618            6 SNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGL   85 (206)
Q Consensus         6 ~~~~~~i~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~al   85 (206)
                      ..|++.|.++||+|||+++++|++.+|++||+|+|++|||||||+|+|.+++.+|.++|.+.+++++||++|+||||+|+
T Consensus        23 ~~i~~~i~~lIG~TPLv~~~~Ls~~~G~~IylK~E~lnptGSfK~RgA~~~i~~a~~~g~l~~g~~~Vv~aSsGN~g~al  102 (344)
T 3vc3_A           23 TNIKKHVSQLIGRTPLVYLNKVTEGCGAYVAVKQEMMQPTASIADRPAYAMITDAEEKNLITPGKTTLIEPTSGNMGISM  102 (344)
T ss_dssp             CSCBSSGGGGSCCCCEEECCSTTTTCCSEEEEEEGGGSTTSBTTHHHHHHHHHHHHHTTCCCTTTCEEEEECSSHHHHHH
T ss_pred             hhhhccHhhhcCCCceEECcccchhhCCEEEEEecCCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCEEEEeCCcHHHHHH
Confidence            45788999999999999999999999999999999999999999999999999999999999988899999999999999


Q ss_pred             HHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHH
Q 028618           86 AFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTG  165 (206)
Q Consensus        86 A~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~  165 (206)
                      |++|+++|++|+||||+++++.|+++++.+||+|+.++...+..++...+.++..+.++.+|++||+||.+++.||.|++
T Consensus       103 A~~aa~~G~~~~IvmP~~~~~~k~~~~~~~GA~Vv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~np~~~~a~~~t~g  182 (344)
T 3vc3_A          103 AFMAAMKGYKMVLTMPSYTSLERRVTMRAFGAELILTDPAKGMGGTVKKAYELLENTPNAHMLQQFSNPANTQVHFETTG  182 (344)
T ss_dssp             HHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHSTTEECCCTTTCHHHHHHHHHTHH
T ss_pred             HHHHHHcCCcEEEEECCCChHHHHHHHHHcCCEEEEECCCCcchHHHHHHHHHHhhccCceeccccccchhHHHHHHHHH
Confidence            99999999999999999999999999999999999998765455666667777777789999999999999888999999


Q ss_pred             HHHHhhhCCCCCEEEEccCcchHHHHHHHHHHhcCCCCeEC
Q 028618          166 PELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKVR  206 (206)
Q Consensus       166 ~Ei~~q~~~~~d~vv~~vG~Gg~~aGi~~~~k~~~p~~~vi  206 (206)
                      .||++|+++.+|+||+|+|+||+++|++.++|+.+|+++||
T Consensus       183 ~EI~eq~~~~~d~vv~~vGgGG~~~Gi~~~~k~~~p~v~vi  223 (344)
T 3vc3_A          183 PEIWEDTNGQVDIFVMGIGSGGTVSGVGQYLKSKNPNVKIY  223 (344)
T ss_dssp             HHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEE
T ss_pred             HHHHHHhCCCceEEEEecCCccchHHHhhhhHhhCCCceEE
Confidence            99999998899999999999999999999999999999986

>4aec_A Cysteine synthase, mitochondrial; lyase, cysteine synthesis, assimilatory sulfate reduction, S plant inorganic sulfur uptake; HET: PLP; 2.40A {Arabidopsis thaliana}

Probab=100.00  E-value=1.3e-52  Score=365.07  Aligned_cols=203  Identities=74%  Similarity=1.229  Sum_probs=193.0

Q ss_pred             cccchhhhhhccccCCcceecccccCCCCceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHH
Q 028618            4 ESSNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGI   83 (206)
Q Consensus         4 ~~~~~~~~i~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~   83 (206)
                      +.+++++++...+++|||++++++++..|++||+|+|++||+||||+|++.+++.++.++|.+.+|..+||++|+||||+
T Consensus       109 ~~~~~~~~i~~~ig~TPLv~l~~Ls~~~g~~I~lK~E~lnptGSfKdRgA~~~i~~A~~~G~l~~g~~~VV~aSsGNhG~  188 (430)
T 4aec_A          109 DGLNIADNVSQLIGKTPMVYLNSIAKGCVANIAAKLEIMEPCCSVKDRIGYSMVTDAEQKGFISPGKSVLVEPTSGNTGI  188 (430)
T ss_dssp             SSCSCBSSGGGGSSCCCEEECCGGGTTCSSEEEEEEGGGSTTSBTTHHHHHHHHHHHHHTTSCCTTTCEEEEECSSHHHH
T ss_pred             cccchhhhhhccCCCCCeEEChhhhhhcCCeEEEEECCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCcEEEEECCCHHHH
Confidence            56778899999999999999999999889999999999999999999999999999999999998878899999999999


Q ss_pred             HHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHh
Q 028618           84 GLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYET  163 (206)
Q Consensus        84 alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t  163 (206)
                      |+|++|+.+|++|+||||++++..|++.++.+||+|+.++...+++++.+.+++++++.++++|++||+||.+++.||.|
T Consensus       189 AlA~aAa~~Gl~~~IvmP~~~s~~k~~~~r~~GAeVv~v~~~~~~~~a~~~a~el~~~~~~~~~i~~~~np~~~~aG~~T  268 (430)
T 4aec_A          189 GLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVLTDPAKGMTGAVQKAEEILKNTPDAYMLQQFDNPANPKIHYET  268 (430)
T ss_dssp             HHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHSTTEEECCTTTCTHHHHHHHHT
T ss_pred             HHHHHHHHhCCEEEEEEcCCCCHHHHHHHHHCCCEEEEECCCCChHHHHHHHHHHHHhcCCcEEecCCCCccHHHHHHHH
Confidence            99999999999999999999999999999999999999986544788999999999988789999999999998899999


Q ss_pred             HHHHHHhhhCCCCCEEEEccCcchHHHHHHHHHHhcCCCCeEC
Q 028618          164 TGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKVR  206 (206)
Q Consensus       164 ~~~Ei~~q~~~~~d~vv~~vG~Gg~~aGi~~~~k~~~p~~~vi  206 (206)
                      ++.||++|+++.||+||+|+|+||+++|++.++|+.+|+++||
T Consensus       269 ~a~EI~eQl~~~~D~vVvpvG~GGtlaGi~~~lk~~~p~~kVi  311 (430)
T 4aec_A          269 TGPEIWDDTKGKVDIFVAGIGTGGTITGVGRFIKEKNPKTQVI  311 (430)
T ss_dssp             HHHHHHHHTTSCEEEEEEECSSSHHHHHHHHHHHHHCTTSEEE
T ss_pred             HHHHHHHHcCCCCCEEEEeCCccHHHHHHHHHHHHhCCCCEEE
Confidence            9999999997789999999999999999999999999999986

>1z7w_A Cysteine synthase; transferase; HET: PLP; 2.20A {Arabidopsis thaliana} SCOP: c.79.1.1 PDB: 1z7y_A* 2isq_A*

Probab=100.00  E-value=2.9e-52  Score=352.42  Aligned_cols=200  Identities=85%  Similarity=1.301  Sum_probs=188.8

Q ss_pred             chhhhhhccccCCcceecccccCCCCceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHH
Q 028618            7 NIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLA   86 (206)
Q Consensus         7 ~~~~~i~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~alA   86 (206)
                      ++++++...+++|||++++++++..|.+||+|+|++||+||||+|++.+++.++.++|.+.|++.+||++|+||||+|+|
T Consensus         4 ~~~~~i~~~~~~TPL~~~~~l~~~~g~~v~~K~E~~~ptGSfK~R~a~~~l~~a~~~G~~~~~~~~vv~assGN~g~alA   83 (322)
T 1z7w_A            4 RIAKDVTELIGNTPLVYLNNVAEGCVGRVAAKLEMMEPCSSVKDRIGFSMISDAEKKGLIKPGESVLIEPTSGNTGVGLA   83 (322)
T ss_dssp             CCCSSGGGGSSCCCEEECCGGGTTCSSEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTSCCTTTCEEEEECSSHHHHHHH
T ss_pred             hhhhHHHHhcCCCCeEECccccccCCceEEEEecccCCCCchHHHHHHHHHHHHHHcCCCCCCCCEEEEeCCCHHHHHHH
Confidence            46789999999999999999998888999999999999999999999999999999999888867899999999999999


Q ss_pred             HHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHHH
Q 028618           87 FMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGP  166 (206)
Q Consensus        87 ~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~  166 (206)
                      ++|+.+|++|++|||+++++.|+++++.+||+|+.++.+.+++++.+.+++++++.++++|++||+|+.++..||.|++.
T Consensus        84 ~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~~~~~~~~~~a~~~~~~~~~~~~i~~~~n~~~~~~g~~t~~~  163 (322)
T 1z7w_A           84 FTAAAKGYKLIITMPASMSTERRIILLAFGVELVLTDPAKGMKGAIAKAEEILAKTPNGYMLQQFENPANPKIHYETTGP  163 (322)
T ss_dssp             HHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHCTTEEECCTTTCTHHHHHHHHTHHH
T ss_pred             HHHHHcCCCEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCCHHHHHHHHHHHHHhCCCeEeCCCCCChhHHHHHHHHHHH
Confidence            99999999999999999999999999999999999997644678999999999998789999999999998889999999


Q ss_pred             HHHhhhCCCCCEEEEccCcchHHHHHHHHHHhcCCCCeEC
Q 028618          167 ELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKVR  206 (206)
Q Consensus       167 Ei~~q~~~~~d~vv~~vG~Gg~~aGi~~~~k~~~p~~~vi  206 (206)
                      ||++|+++.||+||+|+|+||+++|++.+||+.+|++|||
T Consensus       164 Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vi  203 (322)
T 1z7w_A          164 EIWKGTGGKIDGFVSGIGTGGTITGAGKYLKEQNANVKLY  203 (322)
T ss_dssp             HHHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEE
T ss_pred             HHHHHhcCCCCEEEEecCccHhHHHHHHHHHHcCCCCEEE
Confidence            9999997789999999999999999999999999999986

>3tbh_A O-acetyl serine sulfhydrylase; cysteine synthase, type II PLP dependent enzyme, serine ACET transferase; HET: LLP; 1.68A {Leishmania donovani} PDB: 3spx_A* 3t4p_A* 4air_A*

Probab=100.00  E-value=3.4e-52  Score=353.70  Aligned_cols=202  Identities=47%  Similarity=0.821  Sum_probs=188.6

Q ss_pred             cccchhhhhhccccCCcceecccccCCCCceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHH
Q 028618            4 ESSNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGI   83 (206)
Q Consensus         4 ~~~~~~~~i~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~   83 (206)
                      +...+++++...+++|||++++++ +..|++||+|+|++|||||||+|++.+++.++.++|.+++|+..||++|+||||+
T Consensus         7 ~i~~~~~~i~~~ig~TPL~~l~~l-~~~g~~i~~K~E~~~ptGSfK~R~a~~~i~~a~~~g~l~~g~~vvv~aSsGN~g~   85 (334)
T 3tbh_A            7 KSKNVAQSIDQLIGQTPALYLNKL-NNTKAKVVLKMECENPMASVKDRLGFAIYDKAEKEGKLIPGKSIVVESSSGNTGV   85 (334)
T ss_dssp             TTTSCCSSGGGGSSCCCEEECCTT-CCSSSEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTSCCTTTCEEEEECSSHHHH
T ss_pred             hHHHHHHHHHHhcCCCCeEECCcc-cCCCCEEEEEeCCCCCccCcHHHHHHHHHHHHHHcCCCCCCCeEEEEeCCCHHHH
Confidence            345578899999999999999999 7788999999999999999999999999999999998888754469999999999


Q ss_pred             HHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHh
Q 028618           84 GLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYET  163 (206)
Q Consensus        84 alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t  163 (206)
                      |+|++|+.+|++|+||||++++..|+++++.+||+|+.++.+.+++++.+.+++++++.++++|++||+||.|++.||.|
T Consensus        86 alA~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~~~~~~~~~~a~~~~~~~~~~~~i~~~~np~n~~~g~~t  165 (334)
T 3tbh_A           86 SLAHLGAIRGYKVIITMPESMSLERRCLLRIFGAEVILTPAALGMKGAVAMAKKIVAANPNAVLADQFATKYNALIHEET  165 (334)
T ss_dssp             HHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHCTTEEECCTTTCHHHHHHHHHT
T ss_pred             HHHHHHHHhCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCCCCchHHHHHHHHHHHhCCCEEECCccCChhHHHHHHHH
Confidence            99999999999999999999999999999999999999997644788999999999988789999999999988889999


Q ss_pred             HHHHHHhhhCCCCCEEEEccCcchHHHHHHHHHHhcCCCCeEC
Q 028618          164 TGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKVR  206 (206)
Q Consensus       164 ~~~Ei~~q~~~~~d~vv~~vG~Gg~~aGi~~~~k~~~p~~~vi  206 (206)
                      ++.||++|+++.||+||+|+|+||+++|++.++|+.+|++|||
T Consensus       166 ~~~Ei~~q~~~~~d~vv~pvG~GG~~aGi~~~~k~~~p~~~vi  208 (334)
T 3tbh_A          166 TGPEIWEQTNHNVDCFIAGVGTGGTLTGVARALKKMGSHARIV  208 (334)
T ss_dssp             HHHHHHHHTTSCCSEEEEECSSSHHHHHHHHHHHHTTCCCEEE
T ss_pred             HHHHHHHHhCCCCCEEEeccCCcHhHHHHHHHHHHhCCCCEEE
Confidence            9999999997789999999999999999999999999999986

>3dwg_A Cysteine synthase B; sulfur carrier protein complex, beta-grAsp fold, amino-acid biosynthesis; HET: PLP; 1.53A {Mycobacterium tuberculosis} SCOP: c.79.1.0 PDB: 3fgp_A* 3dki_A* 3dwi_A*

Probab=100.00  E-value=4.3e-52  Score=351.88  Aligned_cols=199  Identities=44%  Similarity=0.677  Sum_probs=187.5

Q ss_pred             cchhhhhhccccCCcceecccccCC-------CCceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCC
Q 028618            6 SNIAKDVTELIGNTPLVYLNNIVNG-------CVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTS   78 (206)
Q Consensus         6 ~~~~~~i~~~~~~TPl~~~~~l~~~-------~g~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSs   78 (206)
                      |++|++|.+.+++|||++++++++.       .|.+||+|+|++|||||||+|++.+++.++.++|.++++ .+||++|+
T Consensus         3 ~~~~~~i~~~ig~TPL~~~~~l~~~~~~~~~~~g~~v~~K~E~~~ptGSfK~R~a~~~l~~a~~~g~l~~~-~~vv~aSs   81 (325)
T 3dwg_A            3 MTRYDSLLQALGNTPLVGLQRLSPRWDDGRDGPHVRLWAKLEDRNPTGSIKDRPAVRMIEQAEADGLLRPG-ATILEPTS   81 (325)
T ss_dssp             CCEESSTGGGCSCCCEEECTTTSSBSSCBTTBCCEEEEEEETTSSTTSBTTHHHHHHHHHHHHHTTCCCTT-CEEEEECS
T ss_pred             cccccCHHHhcCCCCcEEccccchhhcccccCCCcEEEEEECCCCCCCChHHHHHHHHHHHHHHcCCCCCC-CEEEEeCC
Confidence            4578999999999999999999887       788999999999999999999999999999999988776 57999999


Q ss_pred             CchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEcCCCCCCccHH
Q 028618           79 GNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPK  158 (206)
Q Consensus        79 GN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~  158 (206)
                      ||||+|+|++|+++|++|++|||+++++.|+++++.+||+|+.++.+.+++++.+.+++++++.++++|++||+||.++.
T Consensus        82 GN~g~alA~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~np~~~~  161 (325)
T 3dwg_A           82 GNTGISLAMAARLKGYRLICVMPENTSVERRQLLELYGAQIIFSAAEGGSNTAVATAKELAATNPSWVMLYQYGNPANTD  161 (325)
T ss_dssp             SHHHHHHHHHHHHHTCEEEEEEESSSCHHHHHHHHHHTCEEEEECSTTTHHHHHHHHHHHHHHCTTSBCCCTTTCHHHHH
T ss_pred             cHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEeCCCCCCHHHHH
Confidence            99999999999999999999999999999999999999999999986558899999999999986699999999999977


Q ss_pred             HHHHhHHHHHHhhhCCCCCEEEEccCcchHHHHHHHHHHhcCCCCeEC
Q 028618          159 IHYETTGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKVR  206 (206)
Q Consensus       159 ~g~~t~~~Ei~~q~~~~~d~vv~~vG~Gg~~aGi~~~~k~~~p~~~vi  206 (206)
                      .||.|++.||++|++. ||+||+|+|+||+++|++.++|+.+|++|||
T Consensus       162 ~g~~t~~~Ei~~q~~~-~d~vv~pvG~GG~~aGi~~~~k~~~p~~~vi  208 (325)
T 3dwg_A          162 SHYCGTGPELLADLPE-ITHFVAGLGTTGTLMGTGRFLREHVANVKIV  208 (325)
T ss_dssp             HHHHTHHHHHHHHCTT-CCEEEEECSSSHHHHHHHHHHHHHSTTCEEE
T ss_pred             HHHHHHHHHHHHhcCC-CCEEEEecCchHHHHHHHHHHHHhCCCCEEE
Confidence            8999999999999964 9999999999999999999999999999986

>2v03_A Cysteine synthase B; pyridoxal phosphate, cysteine biosynthesis, transferase, ENZ kinetics, enzymatic sythesis of novel compounds; HET: LLP CIT; 1.33A {Escherichia coli} PDB: 2bhs_A* 2bht_A* 2jc3_A*

Probab=100.00  E-value=1.5e-50  Score=339.40  Aligned_cols=195  Identities=48%  Similarity=0.772  Sum_probs=182.4

Q ss_pred             hhhhccccCCcceecccccCCCCceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHH
Q 028618           10 KDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMA   89 (206)
Q Consensus        10 ~~i~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~alA~~a   89 (206)
                      +++.+.+++|||++++++++..|.+||+|+|++|||||||+|++.+++.++.++|.+.++ .+||++|+||||+|+|++|
T Consensus         2 ~~i~~~~~~TPL~~~~~l~~~~g~~v~~K~E~~~ptGSfK~R~a~~~i~~a~~~g~~~~g-~~vv~~ssGN~g~a~A~~a   80 (303)
T 2v03_A            2 STLEQTIGNTPLVKLQRMGPDNGSEVWLKLEGNNPAGSVKDRAALSMIVEAEKRGEIKPG-DVLIEATSGNTGIALAMIA   80 (303)
T ss_dssp             CSGGGGSSCCCEEECSSSSCSSSCEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTCCCTT-CEEEEECSSHHHHHHHHHH
T ss_pred             cchHhhcCCCCcEECcccccccCCEEEEEeccCCCCCCcHHHHHHHHHHHHHHcCCCCCC-CEEEEECCcHHHHHHHHHH
Confidence            467889999999999999988899999999999999999999999999999999987776 6899999999999999999


Q ss_pred             HHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHHHHHH
Q 028618           90 AAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELW  169 (206)
Q Consensus        90 ~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~  169 (206)
                      +.+|++|++|||+++++.|+++++.+||+|+.++.+.+++++.+.+++++++.+++ |++||+||.++..||.|++.||+
T Consensus        81 ~~~G~~~~iv~p~~~~~~k~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~-~~~~~~n~~~~~~g~~t~~~Ei~  159 (303)
T 2v03_A           81 ALKGYRMKLLMPDNMSQERRAAMRAYGAELILVTKEQGMEGARDLALEMANRGEGK-LLDQFNNPDNPYAHYTTTGPEIW  159 (303)
T ss_dssp             HHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECTTTHHHHHHHHHHHHHHTTSCE-ECCTTTCTHHHHHHHHTHHHHHH
T ss_pred             HHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCc-ccCCcCChhhHHHhcCCcHHHHH
Confidence            99999999999999999999999999999999997545888999999999885577 99999999997779999999999


Q ss_pred             hhhCCCCCEEEEccCcchHHHHHHHHHHhcCCCCeEC
Q 028618          170 KGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKVR  206 (206)
Q Consensus       170 ~q~~~~~d~vv~~vG~Gg~~aGi~~~~k~~~p~~~vi  206 (206)
                      +|++..||+||+|+|+||+++|++.++|+.+|++|||
T Consensus       160 ~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vi  196 (303)
T 2v03_A          160 QQTGGRITHFVSSMGTTGTITGVSRFMREQSKPVTIV  196 (303)
T ss_dssp             HHTTTCCCEEEEECSSSHHHHHHHHHHHTSSSCCEEE
T ss_pred             HHhCCCCCEEEEEeCccHhHHHHHHHHHHhCCCCEEE
Confidence            9997679999999999999999999999999999986

>1y7l_A O-acetylserine sulfhydrylase, O-acetylserine (thiol)-lyase; X-RAY crystallography, sulfhydrylase; HET: LLP; 1.55A {Haemophilus influenzae} SCOP: c.79.1.1 PDB: 3iqg_X* 3iqh_X* 3iqi_X* 1fcj_A* 1oas_A* 1d6s_A*

Probab=100.00  E-value=5.9e-51  Score=343.58  Aligned_cols=197  Identities=50%  Similarity=0.799  Sum_probs=183.5

Q ss_pred             chhhhhhccccCCcceecccccCCCCceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHH
Q 028618            7 NIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLA   86 (206)
Q Consensus         7 ~~~~~i~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~alA   86 (206)
                      ++++++...+++|||++++++ + .|.+||+|+|++|||||||+|++.+++.++.++|.+.++ .+||++|+||||+|+|
T Consensus         2 ~~~~~i~~~~~~TPL~~l~~l-~-~g~~i~~K~E~~~ptGSfK~R~a~~~i~~a~~~g~~~~~-~~vv~~ssGN~g~a~A   78 (316)
T 1y7l_A            2 AIYADNSYSIGNTPLVRLKHF-G-HNGNVVVKIEGRNPSYSVKCRIGANMVWQAEKDGTLTKG-KEIVDATSGNTGIALA   78 (316)
T ss_dssp             CCCSSGGGGCCCCCEEECSSS-S-STTCEEEEETTSSGGGBTHHHHHHHHHHHHHHTTSSCTT-CEEEESCCSHHHHHHH
T ss_pred             cchhhhHHhcCCCCcEECccC-C-CCCEEEEEeccCCCCCChHHHHHHHHHHHHHHcCCCCCC-CEEEEeCCcHHHHHHH
Confidence            467889999999999999999 6 789999999999999999999999999999999987766 6899999999999999


Q ss_pred             HHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCe-EEcCCCCCCccHHHHHHhHH
Q 028618           87 FMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNA-YMLQQFENPANPKIHYETTG  165 (206)
Q Consensus        87 ~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~g~~t~~  165 (206)
                      ++|+++|++|++|||+++++.|+++++.+||+|+.++.+.+++++.+.+++++++.++. +|++||+||.++..||.|++
T Consensus        79 ~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~  158 (316)
T 1y7l_A           79 YVAAARGYKITLTMPETMSLERKRLLCGLGVNLVLTEGAKGMKGAIAKAEEIVASDPSRYVMLKQFENPANPQIHRETTG  158 (316)
T ss_dssp             HHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHCTTTEECCCTTTCTHHHHHHHHTHH
T ss_pred             HHHHHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEeCCCCCHHHHHHHHHHHHHhCCCCEEECCCCCCHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999997644778999999999987667 88999999999877999999


Q ss_pred             HHHHhhhCCCCCEEEEccCcchHHHHHHHHHHhcC-CCCeEC
Q 028618          166 PELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKN-PNIKVR  206 (206)
Q Consensus       166 ~Ei~~q~~~~~d~vv~~vG~Gg~~aGi~~~~k~~~-p~~~vi  206 (206)
                      .||++|++++||+||+|+|+||+++|++.++|+++ |++|||
T Consensus       159 ~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~~vi  200 (316)
T 1y7l_A          159 PEIWKDTDGKVDVVVAGVGTGGSITGISRAIKLDFGKQITSV  200 (316)
T ss_dssp             HHHHHHTTTCEEEEEEECSSSHHHHHHHHHHHHTSCCCCEEE
T ss_pred             HHHHHHcCCCCCEEEEeCCccccHHHHHHHHHHhCCCCCEEE
Confidence            99999997679999999999999999999999999 999986

>2q3b_A Cysteine synthase A; pyridoxal-5'-phosphate, sulphur metabolism, cysteine biosynthesis, transferase; HET: LLP; 1.80A {Mycobacterium tuberculosis} PDB: 2q3c_A* 2q3d_A* 3rr2_A

Probab=100.00  E-value=1.7e-50  Score=340.38  Aligned_cols=200  Identities=54%  Similarity=0.911  Sum_probs=186.0

Q ss_pred             cchhhhhhccccCCcceecccccCCCCceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHH
Q 028618            6 SNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGL   85 (206)
Q Consensus         6 ~~~~~~i~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~al   85 (206)
                      +++++++...+++|||++++++++..|.+||+|+|++||+||||+|++.+++..+.++|.+.++ .+||++|+||||+|+
T Consensus         4 ~~~~~~i~~~~~~TPL~~~~~l~~~~g~~i~~K~E~~~ptgSfK~R~a~~~l~~a~~~g~~~~g-~~vv~assGN~g~al   82 (313)
T 2q3b_A            4 MSIAEDITQLIGRTPLVRLRRVTDGAVADIVAKLEFFNPANSVKDRIGVAMLQAAEQAGLIKPD-TIILEPTSGNTGIAL   82 (313)
T ss_dssp             CCCCSSGGGGSCCCCEEECSSSCTTCCSEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTCCCTT-CEEEEECSSHHHHHH
T ss_pred             cchhhhHHHhcCCCceEECcccccccCcEEEEEehhcCCCCcHHHHHHHHHHHHHHHcCCCCCC-CEEEEeCCCHHHHHH
Confidence            4578899999999999999999988889999999999999999999999999999999987776 579999999999999


Q ss_pred             HHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHH
Q 028618           86 AFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTG  165 (206)
Q Consensus        86 A~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~  165 (206)
                      |++|+.+|++|++|||+++++.|+++++.+||+|+.++.+.+++++.+.+++++++.+..+|++||+||.++..||.|++
T Consensus        83 A~~a~~~G~~~~iv~p~~~~~~k~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~n~~~~~~~~~t~~  162 (313)
T 2q3b_A           83 AMVCAARGYRCVLTMPETMSLERRMLLRAYGAELILTPGADGMSGAIAKAEELAKTDQRYFVPQQFENPANPAIHRVTTA  162 (313)
T ss_dssp             HHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHCTTEECCCTTTCTHHHHHHHHTHH
T ss_pred             HHHHHHcCCcEEEEECCCCCHHHHHHHHHCCCEEEEeCCCCCHHHHHHHHHHHHHhCCCEEeCCCCCChhhHHHHHHHHH
Confidence            99999999999999999999999999999999999999754478899999999998865588999999999767899999


Q ss_pred             HHHHhhhCCCCCEEEEccCcchHHHHHHHHHHhcCCCCeEC
Q 028618          166 PELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKVR  206 (206)
Q Consensus       166 ~Ei~~q~~~~~d~vv~~vG~Gg~~aGi~~~~k~~~p~~~vi  206 (206)
                      .||++|+++++|+||+|+|+||+++|++.++|+.+|++|||
T Consensus       163 ~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~vi  203 (313)
T 2q3b_A          163 EEVWRDTDGKVDIVVAGVGTGGTITGVAQVIKERKPSARFV  203 (313)
T ss_dssp             HHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEE
T ss_pred             HHHHHHcCCCCCEEEEccCcchhHHHHHHHHHHhCCCCEEE
Confidence            99999997679999999999999999999999999999986

>2pqm_A Cysteine synthase; OASS, PLP, lyase; HET: PLP; 1.86A {Entamoeba histolytica} PDB: 3bm5_A*

Probab=100.00  E-value=3e-50  Score=342.84  Aligned_cols=201  Identities=42%  Similarity=0.722  Sum_probs=185.9

Q ss_pred             cccchhhhhhccccCCcceecccccC----CCCceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCC
Q 028618            4 ESSNIAKDVTELIGNTPLVYLNNIVN----GCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSG   79 (206)
Q Consensus         4 ~~~~~~~~i~~~~~~TPl~~~~~l~~----~~g~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsG   79 (206)
                      ...++++++...+++|||++++++++    ..|++||+|+|++|||||||+|++.+++.++.++|.+.++ .+||++|+|
T Consensus         9 ~~~~~~~~i~~~~g~TPL~~~~~l~~~~~~~~g~~v~~K~E~~~ptGSfKdR~a~~~l~~a~~~g~~~~g-~~vv~aSsG   87 (343)
T 2pqm_A            9 PRKRIYHNILETIGGTPLVELHGVTEHPRIKKGTRILVKLEYFNPMSSVKDRVGFNIVYQAIKDGRLKPG-MEIIESTSG   87 (343)
T ss_dssp             CCCCEESSGGGGSSCCCEEECCGGGCSTTSCTTCEEEEEEGGGSTTSBTHHHHHHHHHHHHHHHTSSCTT-CEEEEECSS
T ss_pred             CchhHHHHHHhhcCCCCeEECCccccccccccCcEEEEEeccCCCCCChHHHHHHHHHHHHHHcCCCCCC-CEEEEECCc
Confidence            34467888999999999999999988    7789999999999999999999999999999999987776 589999999


Q ss_pred             chHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCe-EEcCCCCCCccHH
Q 028618           80 NTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNA-YMLQQFENPANPK  158 (206)
Q Consensus        80 N~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~-~~~~~~~~~~~~~  158 (206)
                      |||+|+|++|+.+|++|++|||+++++.|+++++.+||+|+.++.+.+++++.+.+++++++.+.. ++++||+||.+++
T Consensus        88 N~g~alA~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~~~~~~~~~~a~~~~~~~~~~y~~~~~~~n~~n~~  167 (343)
T 2pqm_A           88 NTGIALCQAGAVFGYRVNIAMPSTMSVERQMIMKAFGAELILTEGKKGMPGAIEEVNKMIKENPGKYFVANQFGNPDNTA  167 (343)
T ss_dssp             HHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHSTTTEEECCTTTCHHHHH
T ss_pred             HHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCcEEECCCCCChhHHH
Confidence            999999999999999999999999999999999999999999997544788999999999987666 7789999999988


Q ss_pred             HHHHhHHHHHHhhhCCCCCEEEEccCcchHHHHHHHHHHhcCCCCeEC
Q 028618          159 IHYETTGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKVR  206 (206)
Q Consensus       159 ~g~~t~~~Ei~~q~~~~~d~vv~~vG~Gg~~aGi~~~~k~~~p~~~vi  206 (206)
                      .||.|++ ||++|+++.||+||+|+|+||+++|++.++|+.+|++|||
T Consensus       168 ~g~~t~~-Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vi  214 (343)
T 2pqm_A          168 AHHYTAN-EIWEDTDGEVDIVVSAVGTSGTVIGVAEKLKEKKKGIKII  214 (343)
T ss_dssp             HHHHHHH-HHHHHTTTCEEEEEEECSSSHHHHHHHHHHHHHCTTCEEE
T ss_pred             HHHHHHH-HHHHHcCCCCCEEEEecCCchhHHHHHHHHHHcCCCCEEE
Confidence            8999999 9999997679999999999999999999999999999986

>2egu_A Cysteine synthase; O-acetylserine sulfhydrase, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; 1.90A {Geobacillus kaustophilus}

Probab=100.00  E-value=1.9e-50  Score=339.37  Aligned_cols=197  Identities=57%  Similarity=0.868  Sum_probs=170.9

Q ss_pred             hhhhhhccccCCcceecccccCCCCceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHH
Q 028618            8 IAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAF   87 (206)
Q Consensus         8 ~~~~i~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~alA~   87 (206)
                      +++++...+++|||++++++++..|.+||+|+|++||+||||+|++.+++..+.++|.+.++ .+||++|+||||+|+|+
T Consensus         4 ~~~~i~~~~~~TPL~~l~~l~~~~g~~i~~K~E~~~ptgSfK~R~a~~~l~~a~~~g~~~~g-~~vv~assGN~g~a~A~   82 (308)
T 2egu_A            4 TVNSITELIGDTPAVKLNRIVDEDSADVYLKLEFMNPGSSVKDRIALAMIEAAEKAGKLKPG-DTIVEPTSGNTGIGLAM   82 (308)
T ss_dssp             CCSCGGGGSSCCCEEECCSSSCTTSCEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTCCCTT-CEEEEECCHHHHHHHHH
T ss_pred             HHHHHHHhcCCCCeEECCcccccCCCEEEEEecccCCCCChHHHHHHHHHHHHHHcCCCCCC-CEEEEeCCCHHHHHHHH
Confidence            57889999999999999999988899999999999999999999999999999999987776 58999999999999999


Q ss_pred             HHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHHHH
Q 028618           88 MAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPE  167 (206)
Q Consensus        88 ~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~E  167 (206)
                      +|+.+|++|++|||+++++.|+++++.+||+|+.++.+.+++++.+.+++++++.+ +++++||+||.++..||.|++.|
T Consensus        83 ~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~a~~l~~~~~-~~~~~~~~n~~~~~~g~~t~~~E  161 (308)
T 2egu_A           83 VAAAKGYKAVLVMPDTMSLERRNLLRAYGAELVLTPGAQGMRGAIAKAEELVREHG-YFMPQQFKNEANPEIHRLTTGKE  161 (308)
T ss_dssp             HHHHHTCEEEEEEESCSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHHC-CBCC--------------CHHHH
T ss_pred             HHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHHCc-CCcCCcCCChhHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999975447889999999988874 58899999999877899999999


Q ss_pred             HHhhhCCCCCEEEEccCcchHHHHHHHHHHhcCCCCeEC
Q 028618          168 LWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKVR  206 (206)
Q Consensus       168 i~~q~~~~~d~vv~~vG~Gg~~aGi~~~~k~~~p~~~vi  206 (206)
                      |++|++++||+||+|+|+||+++|++.++|+.+|++|||
T Consensus       162 i~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~vi  200 (308)
T 2egu_A          162 IVEQMGDQLDAFVAGVGTGGTITGAGKVLREAYPNIKIY  200 (308)
T ss_dssp             HHHHHTTCCCEEEEEGGGTHHHHHHHHHHHHHCTTCEEE
T ss_pred             HHHHcCCCCCEEEEeeCCchhHHHHHHHHHHhCCCCEEE
Confidence            999997679999999999999999999999999999986

>1ve1_A O-acetylserine sulfhydrylase; PLP, transferase, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.45A {Thermus thermophilus} SCOP: c.79.1.1 PDB: 2eco_A* 2ecq_A* 2efy_A*

Probab=100.00  E-value=1.3e-49  Score=333.82  Aligned_cols=193  Identities=55%  Similarity=0.881  Sum_probs=179.4

Q ss_pred             hhccccCCcceecccccCCCCceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCe--EEEeeCCCchHHHHHHHH
Q 028618           12 VTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGES--VLIEPTSGNTGIGLAFMA   89 (206)
Q Consensus        12 i~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~--~vv~aSsGN~g~alA~~a   89 (206)
                      |.+.+++|||++++++++..|.+||+|+|++||+||||+|++.+++.++.++|.+.++ +  +||++|+||||+|+|++|
T Consensus         3 i~~~~~~TPL~~~~~l~~~~g~~v~~K~E~~~ptGSfK~R~a~~~l~~a~~~g~~~~g-~~~~vv~assGN~g~a~A~~a   81 (304)
T 1ve1_A            3 VEGAIGKTPVVRLAKVVEPDMAEVWVKLEGLNPGGSIKDRPAWYMIKDAEERGILRPG-SGQVIVEPTSGNTGIGLAMIA   81 (304)
T ss_dssp             GGGGCCCCCEEECCSSSCTTSCEEEEEEGGGSTTSBTTHHHHHHHHHHHHHTTSCCTT-SCCEEEESCCSHHHHHHHHHH
T ss_pred             hHHhcCCCCcEECcccccccCCEEEEEecccCCCCcHHHHHHHHHHHHHHHcCCCCCC-CccEEEEeCCcHHHHHHHHHH
Confidence            5678999999999999988899999999999999999999999999999999987766 5  899999999999999999


Q ss_pred             HHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHHHHHH
Q 028618           90 AAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELW  169 (206)
Q Consensus        90 ~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~  169 (206)
                      +++|++|++|||+++++.|+++++.+||+|+.++.+.+++++.+.+++++++ ++++|++||+||.++..||.|++.||+
T Consensus        82 ~~~G~~~~i~~p~~~~~~k~~~~~~~Ga~V~~~~~~~~~~~~~~~a~~l~~~-~~~~~~~~~~n~~~~~g~~~t~~~Ei~  160 (304)
T 1ve1_A           82 ASRGYRLILTMPAQMSEERKRVLKAFGAELVLTDPERRMLAAREEALRLKEE-LGAFMPDQFKNPANVRAHYETTGPELY  160 (304)
T ss_dssp             HHHTCEEEEEEETTCCHHHHHHHHHTTCEEEEECTTTHHHHHHHHHHHHHHH-HTCBCCCTTTCHHHHHHHHHTHHHHHH
T ss_pred             HHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHhc-CCCEeCCCCCChhHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999865578899999999888 578999999999996555899999999


Q ss_pred             hhhCCCCCEEEEccCcchHHHHHHHHHHhcCCCCeEC
Q 028618          170 KGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKVR  206 (206)
Q Consensus       170 ~q~~~~~d~vv~~vG~Gg~~aGi~~~~k~~~p~~~vi  206 (206)
                      +|+++.+|+||+|+|+||+++|++.++|+.+|++|||
T Consensus       161 ~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~vi  197 (304)
T 1ve1_A          161 EALEGRIDAFVYGSGTGGTITGVGRYLKERIPHVKVI  197 (304)
T ss_dssp             HHTTTCCSEEEEECSSSHHHHHHHHHHHTTCTTCEEE
T ss_pred             HHcCCCCCEEEEecCCchhHHHHHHHHHHhCCCCEEE
Confidence            9997679999999999999999999999999999986

>1jbq_A B, cystathionine beta-synthase, serine sulfhydrase; fold type II of PLP enzymes, lyase; HET: HEM PLP; 2.60A {Homo sapiens} SCOP: c.79.1.1 PDB: 1m54_A*

Probab=100.00  E-value=7.3e-49  Score=342.75  Aligned_cols=199  Identities=45%  Similarity=0.687  Sum_probs=180.3

Q ss_pred             chhhhhhccccCCcceecccccCCCC--ceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHH
Q 028618            7 NIAKDVTELIGNTPLVYLNNIVNGCV--ARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIG   84 (206)
Q Consensus         7 ~~~~~i~~~~~~TPl~~~~~l~~~~g--~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~a   84 (206)
                      ++++++...+++|||+++++|++.+|  ++||+|+|++||+||||+|++.+++.++.++|.++++ .+||++|+||||+|
T Consensus        97 ~~~~~i~~~ig~TPLv~l~~Ls~~~G~~~~v~lK~E~~nptGSfKdR~a~~~i~~a~~~G~l~~g-~tVV~aSsGN~G~A  175 (435)
T 1jbq_A           97 KILPDILKKIGDTPMVRINKIGKKFGLKCELLAKCEFFNAGGSVKDRISLRMIEDAERDGTLKPG-DTIIEPTSGNTGIG  175 (435)
T ss_dssp             SEESSGGGGSSCCCEEECCSHHHHTTCCSEEEEEEGGGSTTSBTHHHHHHHHHHHHHHHTCSCTT-CEEEEECSSHHHHH
T ss_pred             hHHHHHHhhCCCCCeEECcchhhHhCCCceEEEEECCCCCcCCHHHHHHHHHHHHHHHcCCCCCC-CEEEEeCCCHHHHH
Confidence            46778899999999999999988777  6999999999999999999999999999999988776 58999999999999


Q ss_pred             HHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHH---HHHHHHHHHHhCCCeEEcCCCCCCccHHHHH
Q 028618           85 LAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKG---AVQKAEEILAKTPNAYMLQQFENPANPKIHY  161 (206)
Q Consensus        85 lA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~---~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~  161 (206)
                      +|++|+.+|++|+||||++++..|+++++.+||+|+.++.+..+++   ..+.+++++++.++.+|++||+|+.|+..||
T Consensus       176 lA~aaa~~Gi~~~IvmP~~~s~~k~~~l~~~GAeVv~v~~~~~~d~~~~~~~~a~~la~~~~~~~~i~q~~n~~n~~ag~  255 (435)
T 1jbq_A          176 LALAAAVRGYRCIIVMPEKMSSEKVDVLRALGAEIVRTPTNARFDSPESHVGVAWRLKNEIPNSHILDQYRNASNPLAHY  255 (435)
T ss_dssp             HHHHHHHHTCEEEEEECSCCCHHHHHHHHHTTCEEEECCC-------CCHHHHHHHHHHHSTTEECCCTTTCTHHHHHHH
T ss_pred             HHHHHHHcCCeEEEEeCCCCCHHHHHHHHhCCCEEEEecCCCCcchHHHHHHHHHHHHHhcCCeEEeCccCCcccHHHHH
Confidence            9999999999999999999999999999999999999986432443   4677888888877888999999999888999


Q ss_pred             HhHHHHHHhhhCCCCCEEEEccCcchHHHHHHHHHHhcCCCCeEC
Q 028618          162 ETTGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKVR  206 (206)
Q Consensus       162 ~t~~~Ei~~q~~~~~d~vv~~vG~Gg~~aGi~~~~k~~~p~~~vi  206 (206)
                      .|++.||++|+++.+|+||+|+|+||+++|++.+||+.+|++|||
T Consensus       256 ~t~a~EI~eQl~~~~D~vVvpvGtGGtlaGi~~~lk~~~p~vrVi  300 (435)
T 1jbq_A          256 DTTADEILQQCDGKLDMLVASVGTGGTITGIARKLKEKCPGCRII  300 (435)
T ss_dssp             HTHHHHHHHHHTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEE
T ss_pred             HHHHHHHHHHcCCCCCEEEEecCCcHhHHHHHHHHHHhCCCCEEE
Confidence            999999999997679999999999999999999999999999986

>3l6b_A Serine racemase; pyridoxal phosphate, PLP, isomerase; HET: PLP; 1.50A {Homo sapiens} SCOP: c.79.1.0 PDB: 3l6r_A* 3hmk_A* 3l6c_A*

Probab=100.00  E-value=1.4e-49  Score=339.16  Aligned_cols=195  Identities=21%  Similarity=0.295  Sum_probs=177.5

Q ss_pred             cchhhhhhccccCCcceecccccCCCCceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHH
Q 028618            6 SNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGL   85 (206)
Q Consensus         6 ~~~~~~i~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~al   85 (206)
                      ...++++.+.+++|||+++++|++..|++||+|+|++||+||||+|++.+++.++.++|..... ++||++|+||||+|+
T Consensus        13 ~~a~~~i~~~i~~TPL~~~~~l~~~~g~~i~~K~E~~~ptGSfK~Rga~~~i~~a~~~g~~~~~-~~vv~~SsGNhg~a~   91 (346)
T 3l6b_A           13 EKAHINIRDSIHLTPVLTSSILNQLTGRNLFFKCELFQKTGSFKIRGALNAVRSLVPDALERKP-KAVVTHSSGNHGQAL   91 (346)
T ss_dssp             HHHHHHHGGGSCCCCEECCHHHHHHHTSEEEEEEGGGSGGGBTHHHHHHHHHHTTC-----CCC-SCEEEECSSHHHHHH
T ss_pred             HHHHHHHhcccCCCCeEEchhhHHHhCCeEEEEeCCCCCCCCcHHHHHHHHHHHHHHhccccCC-CEEEEeCCCHHHHHH
Confidence            4467889999999999999999988899999999999999999999999999999887643332 569999999999999


Q ss_pred             HHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHH
Q 028618           86 AFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTG  165 (206)
Q Consensus        86 A~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~  165 (206)
                      |++|+++|++|++|||+++++.|+++++.+||+|+.++.+  ++++.+.+++++++. +++|++|++||.+ ..||.|++
T Consensus        92 A~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~v~~~--~~~~~~~a~~l~~~~-~~~~i~~~~np~~-~~g~~t~~  167 (346)
T 3l6b_A           92 TYAAKLEGIPAYIVVPQTAPDCKKLAIQAYGASIVYCEPS--DESRENVAKRVTEET-EGIMVHPNQEPAV-IAGQGTIA  167 (346)
T ss_dssp             HHHHHHTTCCEEEEEETTSCHHHHHHHHHTTCEEEEECSS--HHHHHHHHHHHHHHH-TCEECCSSSCHHH-HHHHHHHH
T ss_pred             HHHHHHhCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCC--HHHHHHHHHHHHHhc-CCEEECCCCChHH-HHHHHHHH
Confidence            9999999999999999999999999999999999999987  789999999998887 6899999999987 68999999


Q ss_pred             HHHHhhhCCCCCEEEEccCcchHHHHHHHHHHhcCCCCeEC
Q 028618          166 PELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKVR  206 (206)
Q Consensus       166 ~Ei~~q~~~~~d~vv~~vG~Gg~~aGi~~~~k~~~p~~~vi  206 (206)
                      .||++|+ +.+|+||+|+|+||+++|++.++|+.+|++|||
T Consensus       168 ~Ei~~q~-~~~d~vvv~vG~GG~~aGi~~~~k~~~p~~~vi  207 (346)
T 3l6b_A          168 LEVLNQV-PLVDALVVPVGGGGMLAGIAITVKALKPSVKVY  207 (346)
T ss_dssp             HHHHHHS-TTCCEEEEECSSSHHHHHHHHHHHHHCTTSEEE
T ss_pred             HHHHHhC-CCCCEEEEecCccHHHHHHHHHHHHhCCCCEEE
Confidence            9999999 579999999999999999999999999999986

>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*

Probab=100.00  E-value=2.6e-48  Score=347.59  Aligned_cols=201  Identities=43%  Similarity=0.693  Sum_probs=185.7

Q ss_pred             ccchhhhhhccccCCcceecccccCCCC--ceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchH
Q 028618            5 SSNIAKDVTELIGNTPLVYLNNIVNGCV--ARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTG   82 (206)
Q Consensus         5 ~~~~~~~i~~~~~~TPl~~~~~l~~~~g--~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g   82 (206)
                      ..++++.+.+.+++|||++++++++.+|  ++||+|+|++||+||||+|++.+++.++.++|.+.+| .+||++|+||||
T Consensus        47 ~~~~~~~i~~~ig~TPl~~l~~l~~~~g~~~~i~~K~E~~~ptGS~K~R~a~~~i~~a~~~g~~~~g-~~vv~~ssGN~g  125 (527)
T 3pc3_A           47 RQQITPNILEVIGCTPLVKLNNIPASDGIECEMYAKCEFLNPGGSVKDRIGYRMVQDAEEQGLLKPG-YTIIEPTSGNTG  125 (527)
T ss_dssp             CCSSCSSGGGGSSCCCEEECCSHHHHTTCCSEEEEEEGGGSTTSBTTHHHHHHHHHHHHHHTCCCTT-CEEEEECSSHHH
T ss_pred             hhhHHhhHHhhcCCCCcEEcchhhhhcCCCcEEEEEeccCCCCCCHHHHHHHHHHHHHHHcCCCCCC-CEEEEeCCCHHH
Confidence            3567888999999999999999988776  7999999999999999999999999999999998887 579999999999


Q ss_pred             HHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChH---HHHHHHHHHHHhCCCeEEcCCCCCCccHHH
Q 028618           83 IGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMK---GAVQKAEEILAKTPNAYMLQQFENPANPKI  159 (206)
Q Consensus        83 ~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~---~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~  159 (206)
                      +|+|++|+.+|++|+||||++++..|+++++.+||+|+.++.+..++   .+.+.+++++++.++.+|++||+||.++..
T Consensus       126 ~a~A~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~n~~~  205 (527)
T 3pc3_A          126 IGLAMACAVKGYKCIIVMPEKMSNEKVSALRTLGAKIIRTPTEAAYDSPEGLIYVAQQLQRETPNSIVLDQYRNAGNPLA  205 (527)
T ss_dssp             HHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECTTSCTTSTTSHHHHHHHHHHHSSSEECCCTTTCTHHHHH
T ss_pred             HHHHHHHHHhCCeEEEEEcCCCCHHHHHHHHHCCCEEEEeCCCCCcccHHHHHHHHHHHHHhCCCcEecCCCCCcchHHH
Confidence            99999999999999999999999999999999999999998743243   367888899998878889999999998889


Q ss_pred             HHHhHHHHHHhhhCCCCCEEEEccCcchHHHHHHHHHHhcCCCCeEC
Q 028618          160 HYETTGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKVR  206 (206)
Q Consensus       160 g~~t~~~Ei~~q~~~~~d~vv~~vG~Gg~~aGi~~~~k~~~p~~~vi  206 (206)
                      ||.|++.||++|+++.+|+||+|+|+||+++|++.++|+.+|+++||
T Consensus       206 g~~t~~~Ei~~q~~~~~d~vv~~vG~GG~~~G~~~~~k~~~p~~~vi  252 (527)
T 3pc3_A          206 HYDGTAAEILWQLDNKVDMIVVSAGTAGTISGIGRKIKEQVPSCQIV  252 (527)
T ss_dssp             HHHTHHHHHHHHTTTCCSEEEEECSSSHHHHHHHHHHHHHCTTSEEE
T ss_pred             HHHHHHHHHHHhcCCCCCEEEEecCccHHHHHHHHHHHHhCCCCEEE
Confidence            99999999999997789999999999999999999999999999986

>4h27_A L-serine dehydratase/L-threonine deaminase; PLP dependent typeii, PLP binding, liver, lyase; HET: LLP; 1.30A {Homo sapiens} PDB: 1p5j_A* 1pwh_A* 1pwe_A*

Probab=100.00  E-value=2.2e-48  Score=333.66  Aligned_cols=188  Identities=19%  Similarity=0.186  Sum_probs=175.2

Q ss_pred             hhhccccCCcceecccccCCCCceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHHH
Q 028618           11 DVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAA   90 (206)
Q Consensus        11 ~i~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~alA~~a~   90 (206)
                      +....+++|||+++++|++.+|++||+|+|++||+||||+|++.+++.++.++|.     ++||++|+||||+|+|++|+
T Consensus        39 ~~~~~~~~TPL~~~~~l~~~~g~~v~~K~E~~~ptGSfK~Rga~~~i~~a~~~g~-----~~vv~aSsGN~g~alA~aa~  113 (364)
T 4h27_A           39 SGEPLHVKTPIRDSMALSKMAGTSVYLKMDSAQPSGSFKIRGIGHFCKRWAKQGC-----AHFVCSSSGNAGMAAAYAAR  113 (364)
T ss_dssp             --CCSSCCCCEEEEHHHHHHHTSEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTC-----CEEEECCSSHHHHHHHHHHH
T ss_pred             hcCCCCCcCCeEEChhhHHHhCCEEEEEeCCCCCCCCHHHHHHHHHHHHHHhcCC-----CEEEEeCCChHHHHHHHHHH
Confidence            3456788999999999998889999999999999999999999999999998876     68999999999999999999


Q ss_pred             HCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHHHHHHh
Q 028618           91 AKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWK  170 (206)
Q Consensus        91 ~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~  170 (206)
                      ++|++|++|||++++..|+++++.+||+|+.++.+  ++++.+.+++++++.++++|++||+||.+ ..||.|++.||++
T Consensus       114 ~~G~~~~iv~p~~~~~~k~~~~~~~GA~Vv~v~~~--~~~a~~~a~~l~~~~~~~~~~~~~~np~~-~~G~~t~~~Ei~~  190 (364)
T 4h27_A          114 QLGVPATIVVPGTTPALTIERLKNEGATVKVVGEL--LDEAFELAKALAKNNPGWVYIPPFDDPLI-WEGHASIVKELKE  190 (364)
T ss_dssp             HHTCCEEEEEETTSCHHHHHHHHTTTCEEEEECSS--TTHHHHHHHHHHHHSTTEEEECSSCSHHH-HHHHTHHHHHHHH
T ss_pred             HhCCceEEEECCCCCHHHHHHHHHcCCEEEEECCC--HHHHHHHHHHHHHhCCCeEEeCCCCCHHH-HHHHHHHHHHHHH
Confidence            99999999999999999999999999999999976  77999999999999778999999999998 6799999999999


Q ss_pred             hhCCCCCEEEEccCcchHHHHHHHHHHhcC-CCCeEC
Q 028618          171 GSGGRIDALVSGIGTGGTITGAGKFLKEKN-PNIKVR  206 (206)
Q Consensus       171 q~~~~~d~vv~~vG~Gg~~aGi~~~~k~~~-p~~~vi  206 (206)
                      |+++.||+||+|+|+||+++|++.++|+.+ |+++||
T Consensus       191 q~~~~~D~vvvpvG~GG~~aGi~~~~k~~~~p~~~vi  227 (364)
T 4h27_A          191 TLWEKPGAIALSVGGGGLLCGVVQGLQEVGWGDVPVI  227 (364)
T ss_dssp             HCSSCCSEEEEECSSSHHHHHHHHHHHHTTCTTCCEE
T ss_pred             HhCCCCCEEEEcCCccHHHHHHHHHHHHhCCCCCeEE
Confidence            997679999999999999999999999986 888875

>1o58_A O-acetylserine sulfhydrylase; TM0665, structural genomics, J protein structure initiative, joint center for structural G transferase; 1.80A {Thermotoga maritima} SCOP: c.79.1.1 PDB: 3fca_A*

Probab=100.00  E-value=2.3e-48  Score=326.14  Aligned_cols=187  Identities=52%  Similarity=0.739  Sum_probs=173.1

Q ss_pred             hhccccCCcceecccccCCCCceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHHHH
Q 028618           12 VTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAA   91 (206)
Q Consensus        12 i~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~alA~~a~~   91 (206)
                      +...+++|||+++++++    .+||+|+|++|||||||+|++.+++.++.++|.+.+   +||++|+||||+|+|++|+.
T Consensus        14 ~~~~~~~TPL~~l~~l~----~~v~~K~E~~~ptGSfK~R~a~~~l~~a~~~g~~~~---~vv~aSsGN~g~a~A~aa~~   86 (303)
T 1o58_A           14 MERLIGSTPIVRLDSID----SRIFLKLEKNNPGGSVKDRPALFMILDAEKRGLLKN---GIVEPTSGNMGIAIAMIGAK   86 (303)
T ss_dssp             HHHHSCCCCEEECTTTC----TTEEEEEGGGSTTSBTTHHHHHHHHHHHHHTTCCTT---CEEEECSSHHHHHHHHHHHH
T ss_pred             hhhccCCCCeEECccCC----ceEEEEecCCCCCCChHHHHHHHHHHHHHHcCCCCC---CEEEECchHHHHHHHHHHHH
Confidence            67889999999998876    589999999999999999999999999999887553   48999999999999999999


Q ss_pred             CCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHHHHHHhh
Q 028618           92 KQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKG  171 (206)
Q Consensus        92 ~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~q  171 (206)
                      +|++|++|||+++++.|+++++.+||+|+.++.+.+++++.+.+++++++. +++|++||+||.++..||.|++.||++|
T Consensus        87 ~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~~~~~~~~~~a~~~~~~~-~~~~~~~~~n~~~~~~g~~t~~~Ei~~q  165 (303)
T 1o58_A           87 RGHRVILTMPETMSVERRKVLKMLGAELVLTPGELGMKGAVEKALEISRET-GAHMLNQFENPYNVYSHQFTTGPEILKQ  165 (303)
T ss_dssp             HTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHH-CCBCCCTTTCHHHHHHHHHTHHHHHHHH
T ss_pred             cCCcEEEEECCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhc-CeEeCCCCCCHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999997644788999999998887 6888999999999878999999999999


Q ss_pred             hCCCCCEEEEccCcchHHHHHHHHHHhcCCC-CeEC
Q 028618          172 SGGRIDALVSGIGTGGTITGAGKFLKEKNPN-IKVR  206 (206)
Q Consensus       172 ~~~~~d~vv~~vG~Gg~~aGi~~~~k~~~p~-~~vi  206 (206)
                      +++.||+||+|+|+||+++|++.++|+.+|+ +|||
T Consensus       166 ~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~~vi  201 (303)
T 1o58_A          166 MDYQIDAFVAGVGTGGTISGVGRVLKGFFGNGVKIV  201 (303)
T ss_dssp             TTTCCSEEEEECSSSHHHHHHHHHHHHHHGGGSEEE
T ss_pred             cCCCCCEEEEeeCCcccHHHHHHHHHHhCCCCCEEE
Confidence            9767999999999999999999999999998 8885

>1p5j_A L-serine dehydratase; lyase; HET: PLP; 2.50A {Homo sapiens} SCOP: c.79.1.1 PDB: 1pwh_A* 1pwe_A*

Probab=100.00  E-value=5.8e-48  Score=331.94  Aligned_cols=189  Identities=18%  Similarity=0.173  Sum_probs=175.0

Q ss_pred             hhhhccccCCcceecccccCCCCceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHH
Q 028618           10 KDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMA   89 (206)
Q Consensus        10 ~~i~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~alA~~a   89 (206)
                      +++...+++|||+++++|++..|++||+|+|++||+||||+|++.+++.++.++|.     .+||++|+||||+|+|++|
T Consensus        38 p~~~~~~~~TPL~~l~~l~~~~g~~i~~K~E~~~ptGSfKdRga~~~l~~a~~~g~-----~~vv~aSsGN~g~alA~aa  112 (372)
T 1p5j_A           38 MSGEPLHVKTPIRDSMALSKMAGTSVYLKMDSAQPSGSFKIRGIGHFCKRWAKQGC-----AHFVCSSAGNAGMAAAYAA  112 (372)
T ss_dssp             --CCCSSCCCCEEEEHHHHHHHTSCEEEECGGGSGGGBTTHHHHHHHHHHHHHTTC-----CEEEECCSSHHHHHHHHHH
T ss_pred             ccccCCCCCCCceEcHhhHHHhCCEEEEEEcCCCCCCChHHHHHHHHHHHHHHcCC-----CEEEEeCCCHHHHHHHHHH
Confidence            34567889999999999988888999999999999999999999999999988764     6899999999999999999


Q ss_pred             HHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHHHHHH
Q 028618           90 AAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELW  169 (206)
Q Consensus        90 ~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~  169 (206)
                      +.+|++|++|||+++++.|+++++.+||+|+.++.+  ++++.+.+++++++.++++|++||+||.+ ..||.|++.||+
T Consensus       113 ~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~--~~~a~~~a~~l~~~~~~~~~v~~~~n~~~-~~G~~t~~~Ei~  189 (372)
T 1p5j_A          113 RQLGVPATIVVPGTTPALTIERLKNEGATCKVVGEL--LDEAFELAKALAKNNPGWVYIPPFDDPLI-WEGHASIVKELK  189 (372)
T ss_dssp             HHHTCCEEEEECTTCCHHHHHHHHHTTCEEEECCSC--HHHHHHHHHHHHHHSTTEEECCSSCCHHH-HHHHTHHHHHHH
T ss_pred             HHcCCcEEEEECCCCCHHHHHHHHhcCCEEEEECCC--HHHHHHHHHHHHHhcCCcEEeCCCCCHHH-HhhHHHHHHHHH
Confidence            999999999999999999999999999999999986  88999999999988668999999999998 579999999999


Q ss_pred             hhhCCCCCEEEEccCcchHHHHHHHHHHhcC-CCCeEC
Q 028618          170 KGSGGRIDALVSGIGTGGTITGAGKFLKEKN-PNIKVR  206 (206)
Q Consensus       170 ~q~~~~~d~vv~~vG~Gg~~aGi~~~~k~~~-p~~~vi  206 (206)
                      +|++..||+||+|+|+||+++|++.++|+.+ |++|||
T Consensus       190 ~ql~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~p~~~vi  227 (372)
T 1p5j_A          190 ETLWEKPGAIALSVGGGGLLCGVVQGLQECGWGDVPVI  227 (372)
T ss_dssp             HHCSSCCSEEEEECSSSHHHHHHHHHHHHTTCTTCCEE
T ss_pred             HHcCCCCCEEEEecCCchHHHHHHHHHHHhCCCCceEE
Confidence            9997679999999999999999999999986 888885

>2rkb_A Serine dehydratase-like; PLP bound enzyme, enzyme found in human cells, lyase, pyridoxal phosphate; HET: PLP; 2.80A {Homo sapiens}

Probab=100.00  E-value=2e-47  Score=322.23  Aligned_cols=184  Identities=24%  Similarity=0.211  Sum_probs=171.5

Q ss_pred             ccccCCcceecccccCCCCceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHCC
Q 028618           14 ELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQ   93 (206)
Q Consensus        14 ~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g   93 (206)
                      ..+.+|||++++++++..|++||+|+|++||+||||+|++.+++.++.++|.     .+||++|+||||+|+|++|+++|
T Consensus         3 ~~~~~TPL~~~~~l~~~~g~~v~~K~E~~~ptgS~K~R~a~~~l~~a~~~g~-----~~vv~~ssGN~g~alA~~a~~~G   77 (318)
T 2rkb_A            3 PFHVVTPLLESWALSQVAGMPVFLKCENVQPSGSFKIRGIGHFCQEMAKKGC-----RHLVCSSGGNAGIAAAYAARKLG   77 (318)
T ss_dssp             CSSCCCCEEEEHHHHHHHTSCEEEEEGGGSTTSBTTHHHHHHHHHHHHHTTC-----CEEEECCCSHHHHHHHHHHHHHT
T ss_pred             CCCccCCceehHhhHHHhCCeEEEEecCCCCCCCHHHHHHHHHHHHHHHcCC-----CEEEEECCchHHHHHHHHHHHcC
Confidence            3578999999999988888999999999999999999999999999988774     68999999999999999999999


Q ss_pred             CcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHHHHHHhhhC
Q 028618           94 YRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSG  173 (206)
Q Consensus        94 ~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~q~~  173 (206)
                      ++|++|||+++++.|+++++.+||+|+.++.+  ++++.+.+++++++. +++|++||+|+.+ ..||.|++.||++|++
T Consensus        78 ~~~~i~~p~~~~~~k~~~~~~~Ga~V~~~~~~--~~~~~~~a~~~~~~~-~~~~~~~~~n~~~-~~g~~t~~~Ei~~q~~  153 (318)
T 2rkb_A           78 IPATIVLPESTSLQVVQRLQGEGAEVQLTGKV--WDEANLRAQELAKRD-GWENVPPFDHPLI-WKGHASLVQELKAVLR  153 (318)
T ss_dssp             CCEEEEECTTCCHHHHHHHHHTTCEEEECCSS--HHHHHHHHHHHHHST-TEEECCSSCSHHH-HHHHHHHHHHHHHHSS
T ss_pred             CCEEEEECCCCcHHHHHHHHhcCCEEEEECCC--HHHHHHHHHHHHHhc-CCEEeCCCCChhh-ccchhHHHHHHHHhcC
Confidence            99999999999999999999999999999986  889999999998875 8999999999998 6799999999999997


Q ss_pred             CCCCEEEEccCcchHHHHHHHHHHhcC-CCCeEC
Q 028618          174 GRIDALVSGIGTGGTITGAGKFLKEKN-PNIKVR  206 (206)
Q Consensus       174 ~~~d~vv~~vG~Gg~~aGi~~~~k~~~-p~~~vi  206 (206)
                      ..||+||+|+|+||+++|++.++|+.+ |++|||
T Consensus       154 ~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~~vi  187 (318)
T 2rkb_A          154 TPPGALVLAVGGGGLLAGVVAGLLEVGWQHVPII  187 (318)
T ss_dssp             SCCSEEEEECSSSHHHHHHHHHHHHHTCTTSCEE
T ss_pred             CCCCEEEEeeCCCcHHHHHHHHHHHhCCCCCEEE
Confidence            679999999999999999999999985 888875

>1ve5_A Threonine deaminase; riken structural genomics/Pro initiative, RSGI, structural genomics, lyase; HET: PLP; 2.15A {Thermus thermophilus} SCOP: c.79.1.1

Probab=100.00  E-value=2.7e-48  Score=326.59  Aligned_cols=191  Identities=24%  Similarity=0.283  Sum_probs=174.2

Q ss_pred             ccchhhhhhccccCCcceecccccCCCCceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHH
Q 028618            5 SSNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIG   84 (206)
Q Consensus         5 ~~~~~~~i~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~a   84 (206)
                      ....++++...+++|||++++++++..|++||+|+|++|||||||||++.+++..+.  +     ..+||++|+||||+|
T Consensus         7 i~~a~~~i~~~~~~TPL~~~~~l~~~~g~~i~~K~E~~~ptgSfKdR~a~~~i~~l~--~-----~~~vv~~ssGN~g~a   79 (311)
T 1ve5_A            7 LYAAFRRIAPYTHRTPLLTSRLLDGLLGKRLLLKAEHLQKTGSFKARGALSKALALE--N-----PKGLLAVSSGNHAQG   79 (311)
T ss_dssp             HHHHHHHHGGGSCCCCEEECHHHHHHTTSEEEEEEGGGSGGGBTHHHHHHHHHHHSS--S-----CCCEEEECSSHHHHH
T ss_pred             HHHHHHHHhccCCCCCceechhhHHhhCCeEEEEecCCCCcCCcHHHHHHHHHHHhc--C-----CCeEEEECCCcHHHH
Confidence            345778899999999999999998888899999999999999999999999999876  2     257999999999999


Q ss_pred             HHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhH
Q 028618           85 LAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETT  164 (206)
Q Consensus        85 lA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~  164 (206)
                      +|++|+++|++|++|||+++++.|+++++.+||+|+.++.+  ++++.+.+++++++. +++|++||+|+.+ ..||.|+
T Consensus        80 lA~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~--~~~~~~~a~~~~~~~-~~~~~~~~~n~~~-~~g~~t~  155 (311)
T 1ve5_A           80 VAYAAQVLGVKALVVMPEDASPYKKACARAYGAEVVDRGVT--AKNREEVARALQEET-GYALIHPFDDPLV-IAGQGTA  155 (311)
T ss_dssp             HHHHHHHHTCCEEEECCCC--CCHHHHHHHTTCEEECTTCC--TTTHHHHHHHHHHHH-CCEECCSSSSHHH-HHHHHHH
T ss_pred             HHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECCC--HHHHHHHHHHHHHhc-CcEecCCCCCcch-hhhccHH
Confidence            99999999999999999999999999999999999999987  668888999998875 7899999999988 5799999


Q ss_pred             HHHHHhhhC---CCCCEEEEccCcchHHHHHHHHHHhcCCCCeEC
Q 028618          165 GPELWKGSG---GRIDALVSGIGTGGTITGAGKFLKEKNPNIKVR  206 (206)
Q Consensus       165 ~~Ei~~q~~---~~~d~vv~~vG~Gg~~aGi~~~~k~~~p~~~vi  206 (206)
                      +.||++|++   +.+|+||+|+|+||+++|++.++|+.+|++|||
T Consensus       156 ~~Ei~~q~~~~~~~~d~vvvpvG~Gg~~~Gi~~~~k~~~~~~~vi  200 (311)
T 1ve5_A          156 GLELLAQAGRMGVFPGAVLAPVGGGGLLAGLATAVKALSPTTLVL  200 (311)
T ss_dssp             HHHHHHHHHHHTCCCSEEEEECSSSHHHHHHHHHHHHHCTTSEEE
T ss_pred             HHHHHHHHHhcCCCCCEEEEccCchHHHHHHHHHHHHhCCCCEEE
Confidence            999999995   679999999999999999999999999999986

>1v71_A Serine racemase, hypothetical protein C320.14 in chromosome III; dimer, PLP, isomerase; HET: PLP; 1.70A {Schizosaccharomyces pombe} SCOP: c.79.1.1 PDB: 1wtc_A* 2zpu_A* 2zr8_A*

Probab=100.00  E-value=2.1e-48  Score=328.92  Aligned_cols=191  Identities=19%  Similarity=0.294  Sum_probs=173.7

Q ss_pred             cchhhhhhccccCCcceecccccCCCCceEEEEeCCCCCCCChhhHHHHHHHHHHHH-cCCCCCCCeEEEeeCCCchHHH
Q 028618            6 SNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEA-KGLITPGESVLIEPTSGNTGIG   84 (206)
Q Consensus         6 ~~~~~~i~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~-~g~~~~~~~~vv~aSsGN~g~a   84 (206)
                      ...++++.+.+++|||++++++++..|++||+|+|++||+||||+|++.+++..+.+ ++.     ++||++|+||||+|
T Consensus        14 ~~a~~~i~~~i~~TPL~~~~~l~~~~g~~i~~K~E~~~ptGS~KdRga~~~i~~~~~~~~~-----~~vv~~ssGN~g~a   88 (323)
T 1v71_A           14 ASASERIKKFANKTPVLTSSTVNKEFVAEVFFKCENFQKMGAFKFRGALNALSQLNEAQRK-----AGVLTFSSGNHAQA   88 (323)
T ss_dssp             HHHHHHHTTTSCCCCEECCHHHHHHHTSEEEEEEGGGSGGGBTHHHHHHHHHTTCCHHHHH-----HCEEECCSSHHHHH
T ss_pred             HHHHHHHhccCCCCCceEhHhhHHHhCCeEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCC-----CeEEEeCCCcHHHH
Confidence            346678889999999999999988888999999999999999999999999986543 222     57999999999999


Q ss_pred             HHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhH
Q 028618           85 LAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETT  164 (206)
Q Consensus        85 lA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~  164 (206)
                      +|++|+.+|++|++|||++++..|+++++.+||+|+.++.+  ++++.+.+++++++. +++|++||+||.+ ..||.|+
T Consensus        89 lA~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~--~~~~~~~a~~l~~~~-~~~~i~~~~n~~~-~~g~~t~  164 (323)
T 1v71_A           89 IALSAKILGIPAKIIMPLDAPEAKVAATKGYGGQVIMYDRY--KDDREKMAKEISERE-GLTIIPPYDHPHV-LAGQGTA  164 (323)
T ss_dssp             HHHHHHHTTCCEEEEEETTCCHHHHHHHHHTTCEEEEECTT--TTCHHHHHHHHHHHH-TCBCCCSSSSHHH-HHHHTHH
T ss_pred             HHHHHHHcCCCEEEECCCCCcHHHHHHHHHcCCEEEEECCC--HHHHHHHHHHHHHhc-CCEecCCCCCcch-hhhHhHH
Confidence            99999999999999999999999999999999999999987  557888899988876 6788999999988 5799999


Q ss_pred             HHHHHhhhCCCCCEEEEccCcchHHHHHHHHHHhcCCCCeEC
Q 028618          165 GPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKVR  206 (206)
Q Consensus       165 ~~Ei~~q~~~~~d~vv~~vG~Gg~~aGi~~~~k~~~p~~~vi  206 (206)
                      +.||++|++ .+|+||+|+|||||++|++.++|+.+|++|||
T Consensus       165 ~~Ei~~q~~-~~d~vv~~vG~GGt~~Gi~~~~k~~~~~~~vi  205 (323)
T 1v71_A          165 AKELFEEVG-PLDALFVCLGGGGLLSGSALAARHFAPNCEVY  205 (323)
T ss_dssp             HHHHHHHHC-CCSEEEEECSSSHHHHHHHHHHHHHCTTCEEE
T ss_pred             HHHHHHhcC-CCCEEEEecCCcHHHHHHHHHHHHcCCCCEEE
Confidence            999999995 79999999999999999999999999999986

>1tdj_A Biosynthetic threonine deaminase; allostery, cooperative, tetramer, regulation, pyridoxal PHOS isoleucine biosynthesis; HET: PLP; 2.80A {Escherichia coli} SCOP: c.79.1.1 d.58.18.2 d.58.18.2

Probab=100.00  E-value=3.2e-47  Score=337.14  Aligned_cols=187  Identities=26%  Similarity=0.333  Sum_probs=174.2

Q ss_pred             hhhccccCCcceecccccCCCCceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHHH
Q 028618           11 DVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAA   90 (206)
Q Consensus        11 ~i~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~alA~~a~   90 (206)
                      ++.+.+++|||++++++++..|++||+|+|++||+||||+|++.+++..+.+++.    .++||++|+||||+|+|++|+
T Consensus        24 ~i~~~i~~TPL~~l~~Ls~~~g~~V~lK~E~lqPtgSfKdRgA~n~i~~l~~~~~----~~gVV~aSsGNhg~avA~aa~   99 (514)
T 1tdj_A           24 PVYEAAQVTPLQKMEKLSSRLDNVILVKREDRQPVHSFKLRGAYAMMAGLTEEQK----AHGVITASAGNHAQGVAFSSA   99 (514)
T ss_dssp             CGGGTCCCCCEEECHHHHHHTTSEEEEECGGGSTTSSSTHHHHHHHHHTTTTSSC----SSSCEEEECSSSHHHHHHHHH
T ss_pred             hHhcccCCCCcEEchhhHHhhCCeEEEEECCCCCcccHHHHHHHHHHHHHHHhcC----CCEEEEECCcHHHHHHHHHHH
Confidence            5778899999999999998889999999999999999999999999998765432    257999999999999999999


Q ss_pred             HCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHHHHHHh
Q 028618           91 AKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWK  170 (206)
Q Consensus        91 ~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~  170 (206)
                      ++|++|+||||.+++..|+++++.+||+|+.++.+  ++++.+.+++++++. +++|++||+|+.+ +.||+|++.||++
T Consensus       100 ~lGi~~~IvmP~~~p~~Kv~~~r~~GAeVvlv~~~--~dda~~~a~ela~e~-g~~~v~pfdnp~~-iaGqgTig~EI~e  175 (514)
T 1tdj_A          100 RLGVKALIVMPTATADIKVDAVRGFGGEVLLHGAN--FDEAKAKAIELSQQQ-GFTWVPPFDHPMV-IAGQGTLALELLQ  175 (514)
T ss_dssp             HTTCCEEEECCSSCCHHHHHHHHHHSCEEECCCSS--HHHHHHHHHHHHHHH-CCEECCSSCCHHH-HHHHHHHHHHHHH
T ss_pred             HcCCcEEEEECCCCCHHHHHHHHHCCCEEEEECCC--HHHHHHHHHHHHHhc-CCEeeCCCCCHHH-HHHHHHHHHHHHH
Confidence            99999999999999999999999999999999876  889999999999886 7899999999998 6899999999999


Q ss_pred             hhCCCCCEEEEccCcchHHHHHHHHHHhcCCCCeEC
Q 028618          171 GSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKVR  206 (206)
Q Consensus       171 q~~~~~d~vv~~vG~Gg~~aGi~~~~k~~~p~~~vi  206 (206)
                      |++. +|+||+|+|+||+++|++.++|+++|++|||
T Consensus       176 Ql~~-~D~vvvpvGgGGliaGia~~lk~~~P~~kVI  210 (514)
T 1tdj_A          176 QDAH-LDRVFVPVGGGGLAAGVAVLIKQLMPQIKVI  210 (514)
T ss_dssp             HCTT-CCEEEEECSSSHHHHHHHHHHHHHCTTCEEE
T ss_pred             HCCC-CCEEEEccCcHHHHHHHHHHHHHhCCCCEEE
Confidence            9965 9999999999999999999999999999986

>3iau_A Threonine deaminase; pyridoxal phosphate, amino-acid biosynthesis, defensive PROT jasmonic acid pathway, jasmonic acid,structural genomics; HET: LLP 15P; 2.35A {Solanum lycopersicum}

Probab=100.00  E-value=4.6e-47  Score=325.78  Aligned_cols=188  Identities=24%  Similarity=0.327  Sum_probs=173.4

Q ss_pred             hhhhccccCCcceecccccCCCCceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHH
Q 028618           10 KDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMA   89 (206)
Q Consensus        10 ~~i~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~alA~~a   89 (206)
                      +++...+++|||++++++++.+|++||+|+|++|||||||||++.+++..+.+++.    ..+||++|+||||+|+|++|
T Consensus        52 ~~i~~~i~~TPL~~l~~l~~~~g~~i~~K~E~~~ptgSfKdRga~~~i~~l~~~~~----~~~vv~assGN~g~a~A~aa  127 (366)
T 3iau_A           52 SPVYDVAIESPLELAEKLSDRLGVNFYIKREDKQRVFSFKLRGAYNMMSNLSREEL----DKGVITASAGNHAQGVALAG  127 (366)
T ss_dssp             CCGGGTCCCCCEEECHHHHHHHTSEEEEEEGGGSTTSBTTHHHHHHHHHTSCHHHH----HHCEEEECSSHHHHHHHHHH
T ss_pred             HHHhhhcCCCCcEEhhhhhHhhCCEEEEEecCCCCCcchHHHHHHHHHHHHHHhCC----CCEEEEeCCCHHHHHHHHHH
Confidence            35678899999999999998889999999999999999999999999987643321    15799999999999999999


Q ss_pred             HHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHHHHHH
Q 028618           90 AAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELW  169 (206)
Q Consensus        90 ~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~  169 (206)
                      +++|++|++|||++++..|+++++.+||+|+.++.+  ++++.+.+++++++. +++|++||+|+.+ +.||.|++.||+
T Consensus       128 ~~~G~~~~iv~P~~~~~~k~~~~~~~GA~V~~v~~~--~~~~~~~a~~~~~~~-~~~~i~~~~n~~~-i~g~~t~~~Ei~  203 (366)
T 3iau_A          128 QRLNCVAKIVMPTTTPQIKIDAVRALGGDVVLYGKT--FDEAQTHALELSEKD-GLKYIPPFDDPGV-IKGQGTIGTEIN  203 (366)
T ss_dssp             HHTTCCEEEEECTTCCHHHHHHHHHTTCEEEECCSS--HHHHHHHHHHHHHHH-TCEECCSSSSHHH-HHHHHHHHHHHH
T ss_pred             HHhCCceEEEeCCCCCHHHHHHHHHCCCeEEEECcC--HHHHHHHHHHHHHhc-CCEecCCCCChHH-HHHHHHHHHHHH
Confidence            999999999999999999999999999999999966  889999999998886 7899999999998 589999999999


Q ss_pred             hhhCCCCCEEEEccCcchHHHHHHHHHHhcCCCCeEC
Q 028618          170 KGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKVR  206 (206)
Q Consensus       170 ~q~~~~~d~vv~~vG~Gg~~aGi~~~~k~~~p~~~vi  206 (206)
                      +|+ +.||+||+|+|+||+++|++.++|+.+|+++||
T Consensus       204 ~q~-~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~vi  239 (366)
T 3iau_A          204 RQL-KDIHAVFIPVGGGGLIAGVATFFKQIAPNTKII  239 (366)
T ss_dssp             HHC-CSEEEEEEECSSSHHHHHHHHHHHHHSTTSEEE
T ss_pred             Hhc-CCCCEEEEccCchHHHHHHHHHHHHhCCCCeEE
Confidence            999 689999999999999999999999999999985

>2d1f_A Threonine synthase; amino acid synthesis, pyridoxal-5'-phosphate, PLP, lyase; HET: PLP; 2.50A {Mycobacterium tuberculosis}

Probab=100.00  E-value=2.2e-46  Score=320.87  Aligned_cols=188  Identities=24%  Similarity=0.267  Sum_probs=173.5

Q ss_pred             hhhhccccCCcceecccccCCCCceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHH
Q 028618           10 KDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMA   89 (206)
Q Consensus        10 ~~i~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~alA~~a   89 (206)
                      +++...+++|||++++++++..|++||+|+|++||+||||+|++.+++.++.++|.     .+||++|+||||+|+|++|
T Consensus        30 ~~v~~~~g~TPL~~~~~l~~~~g~~i~~K~E~~~ptgSfKdR~a~~~l~~a~~~g~-----~~vv~aSsGN~g~alA~~a  104 (360)
T 2d1f_A           30 TPVTLLEGGTPLIAATNLSKQTGCTIHLKVEGLNPTGSFKDRGMTMAVTDALAHGQ-----RAVLCASTGNTSASAAAYA  104 (360)
T ss_dssp             CCCCCCCCCCCEEECHHHHHHHSSEEEEEEGGGSTTSBTTHHHHHHHHHHHHHTTC-----SEEEECCSSHHHHHHHHHH
T ss_pred             CccccccCCCCCeechhhHHHhCCeEEEEECCCCCCcCHHHHHHHHHHHHHHHCCC-----CEEEEeCCcHHHHHHHHHH
Confidence            46788889999999999988888999999999999999999999999999998886     6899999999999999999


Q ss_pred             HHCCCcEEEEeCCC-CCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHHHHH
Q 028618           90 AAKQYRLIITMPAS-MSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPEL  168 (206)
Q Consensus        90 ~~~g~~~~ivvp~~-~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei  168 (206)
                      +.+|++|++|||++ +++.|+++++.+||+|+.++.+  ++++.+.+++++++.++.+|+++ +|+.+ ..||.|++.||
T Consensus       105 ~~~G~~~~i~~p~~~~~~~k~~~~~~~GA~v~~v~~~--~~~~~~~a~~l~~~~~~~~~i~~-~n~~~-~~g~~t~~~Ei  180 (360)
T 2d1f_A          105 ARAGITCAVLIPQGKIAMGKLAQAVMHGAKIIQIDGN--FDDCLELARKMAADFPTISLVNS-VNPVR-IEGQKTAAFEI  180 (360)
T ss_dssp             HHHTCEEEEEECSSCCCHHHHHHHHHTTCEEEEBSSC--HHHHHHHHHHHHHHCTTEEECST-TCHHH-HHHHTHHHHHH
T ss_pred             HHcCCcEEEEEcCCCCCHHHHHHHHHcCCEEEEECCC--HHHHHHHHHHHHHhcCCeEEcCC-CChhh-hhhHHHHHHHH
Confidence            99999999999998 9999999999999999999987  88999999999998855888988 88888 57999999999


Q ss_pred             HhhhCCCCCEEEEccCcchHHHHHHHHHHhcCC------CCeEC
Q 028618          169 WKGSGGRIDALVSGIGTGGTITGAGKFLKEKNP------NIKVR  206 (206)
Q Consensus       169 ~~q~~~~~d~vv~~vG~Gg~~aGi~~~~k~~~p------~~~vi  206 (206)
                      ++|++..||+||+|+|+||+++|++.+|++.+|      .+|||
T Consensus       181 ~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~G~~~~~~~vi  224 (360)
T 2d1f_A          181 VDVLGTAPDVHALPVGNAGNITAYWKGYTEYHQLGLIDKLPRML  224 (360)
T ss_dssp             HHHHSSCCSEEEEECSSSHHHHHHHHHHHHHHHTTSCSSCCEEE
T ss_pred             HHHcCCCCCEEEEeCCchHHHHHHHHHHHHHHhccccccCceEE
Confidence            999976799999999999999999999998754      56764

>3aey_A Threonine synthase; PLP, pyridoxal phosphate, lyase; 1.92A {Thermus thermophilus} PDB: 1uin_A* 1uim_A* 3aex_A* 1v7c_A

Probab=100.00  E-value=3.6e-46  Score=318.55  Aligned_cols=187  Identities=22%  Similarity=0.210  Sum_probs=173.0

Q ss_pred             hhhhccccCCcceec--ccccCCCCceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHH
Q 028618           10 KDVTELIGNTPLVYL--NNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAF   87 (206)
Q Consensus        10 ~~i~~~~~~TPl~~~--~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~alA~   87 (206)
                      +++...+++|||+++  +++++..|++||+|+|++||+||||+|++.+++.++.++|.     ++||++|+||||+|+|+
T Consensus        20 ~~v~~~~g~TPL~~~~~~~l~~~~g~~v~~K~E~~~ptgS~KdR~a~~~l~~a~~~g~-----~~vv~~SsGN~g~alA~   94 (351)
T 3aey_A           20 PVISLLEGSTPLIPLKGPEEARKKGIRLYAKYEGLNPTGSFKDRGMTLAVSKAVEGGA-----QAVACASTGNTAASAAA   94 (351)
T ss_dssp             CCCCSCCCCCCEEECCCCHHHHTTTCEEEEEEGGGSTTSBTTHHHHHHHHHHHHHTTC-----SEEEESCSSHHHHHHHH
T ss_pred             CceecCCCCCCeeecCchhhHHHhCCeEEEEecCCCCcccHHHHHHHHHHHHHHhcCC-----CEEEEeCCCHHHHHHHH
Confidence            568889999999999  99988889999999999999999999999999999998886     68999999999999999


Q ss_pred             HHHHCCCcEEEEeCCC-CCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHHH
Q 028618           88 MAAAKQYRLIITMPAS-MSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGP  166 (206)
Q Consensus        88 ~a~~~g~~~~ivvp~~-~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~  166 (206)
                      +|+.+|++|++|||++ ++..|+++++.+||+|+.++.+  ++++.+.+++++++. +++|+++ +|+.+ ..||.|++.
T Consensus        95 ~a~~~G~~~~iv~p~~~~~~~k~~~~~~~GA~V~~v~~~--~~~~~~~a~~l~~~~-~~~~~~~-~n~~~-~~g~~t~~~  169 (351)
T 3aey_A           95 YAARAGILAIVVLPAGYVALGKVAQSLVHGARIVQVEGN--FDDALRLTQKLTEAF-PVALVNS-VNPHR-LEGQKTLAF  169 (351)
T ss_dssp             HHHHHTSEEEEEEETTCSCHHHHHHHHHTTCEEEEEESC--HHHHHHHHHHHHHHS-SEEECST-TCHHH-HHHHHHHHH
T ss_pred             HHHHcCCCEEEEECCCCCCHHHHHHHHHcCCEEEEECCC--HHHHHHHHHHHHHhc-CcEecCC-CCccc-eeeeeeHHH
Confidence            9999999999999998 9999999999999999999987  889999999999887 5888988 88888 579999999


Q ss_pred             HHHhhhCCCCCEEEEccCcchHHHHHHHHHHhcCC------CCeEC
Q 028618          167 ELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNP------NIKVR  206 (206)
Q Consensus       167 Ei~~q~~~~~d~vv~~vG~Gg~~aGi~~~~k~~~p------~~~vi  206 (206)
                      ||++|++..||+||+|+|+||+++|++.++|+.+|      .+|||
T Consensus       170 Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~G~~~~~~~vi  215 (351)
T 3aey_A          170 EVVDELGDAPHYHALPVGNAGNITAHWMGYKAYHALGKAKRLPRML  215 (351)
T ss_dssp             HHHHHHSSCCSEEEEECSSSHHHHHHHHHHHHHHHHTSCSSCCEEE
T ss_pred             HHHHHcCCCCCEEEEecCchHHHHHHHHHHHHHHhccccCCCCeEE
Confidence            99999976799999999999999999999998754      56764

>2zsj_A Threonine synthase; PLP dependent enzyme, lyase; HET: PLP; 1.80A {Aquifex aeolicus}

Probab=100.00  E-value=4.2e-46  Score=318.25  Aligned_cols=187  Identities=24%  Similarity=0.227  Sum_probs=172.7

Q ss_pred             hhhhccccCCcceecccccCCCCce--EEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHH
Q 028618           10 KDVTELIGNTPLVYLNNIVNGCVAR--IAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAF   87 (206)
Q Consensus        10 ~~i~~~~~~TPl~~~~~l~~~~g~~--i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~alA~   87 (206)
                      +++...+++|||++++++++..|++  ||+|+|++||+||||+|++.+++.++.++|.     .+||++|+||||+|+|+
T Consensus        22 ~~v~~~~g~TPL~~~~~l~~~~g~~~~i~~K~E~~~ptGS~KdR~a~~~l~~a~~~g~-----~~vv~~SsGN~g~alA~   96 (352)
T 2zsj_A           22 PIVTLYEGNTPLIEADNLARAIGFKGKIYLKYEGLNPTGSFKDRGMTLAISKAVEAGK-----RAVICASTGNTSASAAA   96 (352)
T ss_dssp             CCCCCCCCCCCEEECHHHHHHHTCCSEEEEEEGGGSTTSBTTHHHHHHHHHHHHHTTC-----CEEEECCSSHHHHHHHH
T ss_pred             CceecccCCCCCeehHHHHHHhCCCceEEEEECCCCCCccHHHHHHHHHHHHHHhcCC-----CEEEEeCCchHHHHHHH
Confidence            5678899999999999998878888  9999999999999999999999999998886     68999999999999999


Q ss_pred             HHHHCCCcEEEEeCCC-CCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHHH
Q 028618           88 MAAAKQYRLIITMPAS-MSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGP  166 (206)
Q Consensus        88 ~a~~~g~~~~ivvp~~-~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~  166 (206)
                      +|+.+|++|++|||++ ++..|+++++.+||+|+.++.+  ++++.+.+++++++. +++|+++ +|+.+ ..||.|++.
T Consensus        97 ~a~~~G~~~~i~~p~~~~~~~k~~~~~~~GA~v~~v~~~--~~~~~~~a~~l~~~~-~~~~~~~-~n~~~-~~g~~t~~~  171 (352)
T 2zsj_A           97 YAARAGLRAYVLLPKGAVAIGKLSQAMIYGAKVLAIQGT--FDDALNIVRKIGENF-PVEIVNS-VNPYR-IEGQKTAAF  171 (352)
T ss_dssp             HHHHHTCEEEEEEEGGGCCHHHHHHHHHTTCEEEEESSC--HHHHHHHHHHHHHHS-SEEECST-TCTHH-HHHHTHHHH
T ss_pred             HHHhcCCcEEEEECCCCCCHHHHHHHHHcCCEEEEECCC--HHHHHHHHHHHHHHc-CcEECCC-CCcch-hhhHhHHHH
Confidence            9999999999999998 9999999999999999999987  889999999999887 5888988 89988 679999999


Q ss_pred             HHHhhhCCCCCEEEEccCcchHHHHHHHHHHhcCC------CCeEC
Q 028618          167 ELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNP------NIKVR  206 (206)
Q Consensus       167 Ei~~q~~~~~d~vv~~vG~Gg~~aGi~~~~k~~~p------~~~vi  206 (206)
                      ||++|++..||+||+|+|+||+++|++.++|+.+|      .+|||
T Consensus       172 Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~G~~~~~~~vi  217 (352)
T 2zsj_A          172 EICDTLGEAPDYHFIPVGNAGNITAYWKGFKIYYEEGKITKLPRMM  217 (352)
T ss_dssp             HHHHHHSSCCSEEEEECSSSHHHHHHHHHHHHHHHTTSCSSCCEEE
T ss_pred             HHHHHcCCCCCEEEEeCCCcHHHHHHHHHHHHHHhcCCCCCCCEEE
Confidence            99999976799999999999999999999998754      56764

>3ss7_X D-serine dehydratase; type II fold, ALFA,beta-elimination, P 5'-phosphate, lyase; HET: PLP; 1.55A {Escherichia coli} PDB: 3ss9_X* 3r0x_A* 3r0z_A

Probab=100.00  E-value=9.9e-46  Score=324.28  Aligned_cols=190  Identities=21%  Similarity=0.259  Sum_probs=171.0

Q ss_pred             ccccCCcceeccccc----CCC----CceEEEEeCCCCC-CCChhhHHHHHHHHH-----HHHcCCCCCCC---------
Q 028618           14 ELIGNTPLVYLNNIV----NGC----VARIAAKLEMMEP-CSSVKDRIGYSMISD-----AEAKGLITPGE---------   70 (206)
Q Consensus        14 ~~~~~TPl~~~~~l~----~~~----g~~i~~K~E~~~p-tGS~K~R~a~~~~~~-----a~~~g~~~~~~---------   70 (206)
                      ..+++|||+++++++    +.+    |.+||+|+|++|| |||||+|++.+++..     ++++|.+.+|.         
T Consensus        74 ~g~~~TPL~~~~~l~~~l~~~~g~~~~~~v~lK~E~~~p~tGSfK~Rga~~~i~~l~~~~a~~~G~l~~g~~~~~l~~~~  153 (442)
T 3ss7_X           74 GGIIESELVAIPAMQKRLEKEYQQPISGQLLLKKDSHLPISGSIKARGGIYEVLAHAEKLALEAGLLTLDDDYSKLLSPE  153 (442)
T ss_dssp             TTCCCCCEEECHHHHHHHHHHHTCCCCSEEEEEEGGGCTTTSBTHHHHHHHHHHHHHHHHHHHTTSCCTTSCGGGGGSHH
T ss_pred             CCCCCCCcEEhHhhhhHHHHhhCCCcCCeEEEeecCCCCCCCCcHHHHHHHHHHHHhHHHHHHcCCCCCCcchhhhhhhh
Confidence            345799999999887    544    4799999999999 999999999999986     78999888775         


Q ss_pred             -------eEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCC
Q 028618           71 -------SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTP  143 (206)
Q Consensus        71 -------~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~  143 (206)
                             .+||++|+||||+|+|++|+++|++|+||||+++++.|+++++.+||+|+.++.+  ++++.+.+++++++.+
T Consensus       154 ~r~~~~~~~vv~aSsGNhg~avA~~aa~~G~~~~Ivmp~~~~~~k~~~~r~~GA~Vv~v~~~--~~~a~~~a~~~a~~~~  231 (442)
T 3ss7_X          154 FKQFFSQYSIAVGSTGNLGLSIGIMSARIGFKVTVHMSADARAWKKAKLRSHGVTVVEYEQD--YGVAVEEGRKAAQSDP  231 (442)
T ss_dssp             HHHHHHTSEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEESSC--HHHHHHHHHHHHHTCT
T ss_pred             hhhhccCcEEEEECCCHHHHHHHHHHHHhCCcEEEEECCCCCHHHHHHHHHCCCEEEEECCC--HHHHHHHHHHHHHhCC
Confidence                   4899999999999999999999999999999999999999999999999999987  8899999999999887


Q ss_pred             CeEEcCCCCCCccHHHHHHhHHHHHHhhhCC--------CCCEEEEccCcchHHHHHHHHHHhc-CCCCeEC
Q 028618          144 NAYMLQQFENPANPKIHYETTGPELWKGSGG--------RIDALVSGIGTGGTITGAGKFLKEK-NPNIKVR  206 (206)
Q Consensus       144 ~~~~~~~~~~~~~~~~g~~t~~~Ei~~q~~~--------~~d~vv~~vG~Gg~~aGi~~~~k~~-~p~~~vi  206 (206)
                      +++|+++ .|+.+++.||.|++.||++|++.        .||+||+|+|+||+++|++.+||+. +|+++||
T Consensus       232 ~~~~i~~-~n~~~~~~G~~t~g~Ei~eQl~~~g~~vD~~~Pd~VvvpvG~GG~~aGi~~~lk~~~~~~v~vi  302 (442)
T 3ss7_X          232 NCFFIDD-ENSRTLFLGYSVAGQRLKAQFAQQGRIVDADNPLFVYLPCGVGGGPGGVAFGLKLAFGDHVHCF  302 (442)
T ss_dssp             TEEECCT-TTCHHHHHHHHHHHHHHHHHHHHHTCCCBTTBCEEEEEECSSSHHHHHHHHHHHHHHGGGEEEE
T ss_pred             CceeCCC-CChHHHHHHHHHHHHHHHHHHHhhcCcccccCCCEEEEEeCCchHHHHHHHHHHHhcCCCCEEE
Confidence            7899998 45555689999999999999842        3679999999999999999999997 7998885

>1f2d_A 1-aminocyclopropane-1-carboxylate deaminase; carbon-carbon L open twisted alpha/beta, lyase; HET: PLP; 2.00A {Williopsis saturnus} SCOP: c.79.1.1 PDB: 1j0e_A* 1j0d_A* 1j0c_A*

Probab=100.00  E-value=4.1e-46  Score=317.05  Aligned_cols=195  Identities=15%  Similarity=0.105  Sum_probs=173.8

Q ss_pred             cchhhhhhccccCCcceecccccCCC-C-ceEEEEeCCCC-C--CCChhhHHHHHHHHHHHHcCCCCCCCeEEEe--eCC
Q 028618            6 SNIAKDVTELIGNTPLVYLNNIVNGC-V-ARIAAKLEMME-P--CSSVKDRIGYSMISDAEAKGLITPGESVLIE--PTS   78 (206)
Q Consensus         6 ~~~~~~i~~~~~~TPl~~~~~l~~~~-g-~~i~~K~E~~~-p--tGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~--aSs   78 (206)
                      ++.++++...+++|||++++++++.+ | .+||+|+|++| |  +||||+|++.+++.++.++|.     ++||+  +|+
T Consensus         3 l~~~~~i~~~~~~TPL~~~~~l~~~~~g~~~i~~K~E~~n~p~~~Gs~K~R~a~~~l~~a~~~g~-----~~vv~~G~ss   77 (341)
T 1f2d_A            3 VAKFAKYPLTFGPSPISNLNRLSQHLGSKVNVYAKREDCNSGLAFGGNKLRKLEYIVPDIVEGDY-----THLVSIGGRQ   77 (341)
T ss_dssp             TTSSCCCCCSSSSCCEEECHHHHHHTTTCSEEEEEEGGGSCSSTTCCHHHHHHTTTHHHHHHSCC-----SEEEEEEETT
T ss_pred             cccCCCcccCCCCCcceeHHhHHHhhCCCceEEEEeCCCCCCCCCCchHHHHHHHHHHHHHHcCC-----CEEEEcCCcc
Confidence            34567788999999999999998887 7 89999999999 9  999999999999999999886     58999  999


Q ss_pred             CchHHHHHHHHHHCCCcEEEEeCCCCC-----HH------HHHHHHHcCCEEEEeCCCCCh---HHHHHHHHHHHHhCCC
Q 028618           79 GNTGIGLAFMAAAKQYRLIITMPASMS-----LE------RRIILRAFGAELVLTDPAKGM---KGAVQKAEEILAKTPN  144 (206)
Q Consensus        79 GN~g~alA~~a~~~g~~~~ivvp~~~~-----~~------~~~~~~~~Ga~v~~~~~~~~~---~~~~~~a~~~~~~~~~  144 (206)
                      ||||+|+|++|+.+|++|++|||++++     +.      |++.++.+||+|+.++.+...   +++.+.+++++++.+.
T Consensus        78 GN~g~alA~~a~~~G~~~~iv~p~~~~~~~~~~~~~~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~~~~a~~l~~~~~~  157 (341)
T 1f2d_A           78 SNQTRMVAALAAKLGKKCVLIQEDWVPIPEAEKDVYNRVGNIELSRIMGADVRVIEDGFDIGMRKSFANALQELEDAGHK  157 (341)
T ss_dssp             CHHHHHHHHHHHHHTCEEEEEEECCSCCCGGGTTTTTTSHHHHHHHHTTCEEEECCCCCCSSCCHHHHHHHHHHHHTTCC
T ss_pred             hHHHHHHHHHHHHhCCceEEEeccCCCccccccccccccccHHHHHhCCCEEEEeCCccchhHHHHHHHHHHHHHhcCCc
Confidence            999999999999999999999999887     44      999999999999999976422   3677788888888654


Q ss_pred             eE-EcCC-CCCCccHHHHHHhHHHHHHhhhC---CCCCEEEEccCcchHHHHHHHHHHhcCCCCeEC
Q 028618          145 AY-MLQQ-FENPANPKIHYETTGPELWKGSG---GRIDALVSGIGTGGTITGAGKFLKEKNPNIKVR  206 (206)
Q Consensus       145 ~~-~~~~-~~~~~~~~~g~~t~~~Ei~~q~~---~~~d~vv~~vG~Gg~~aGi~~~~k~~~p~~~vi  206 (206)
                      .+ +++| |+||.+ ..||.|++.||++|++   ..||+||+|+|||||++|++.+|++.+|++|||
T Consensus       158 ~~~i~~~~~~np~~-~~G~~t~~~Ei~~q~~~~~~~~d~vv~~vGtGgt~~Gi~~~~k~~~~~~~vi  223 (341)
T 1f2d_A          158 PYPIPAGCSEHKYG-GLGFVGFADEVINQEVELGIKFDKIVVCCVTGSTTAGILAGMAQYGRQDDVI  223 (341)
T ss_dssp             EEEECGGGTTSTTT-TTHHHHHHHHHHHHHHHHTCCCSEEEEEESSSHHHHHHHHHHGGGTCGGGEE
T ss_pred             EEEeCCCcCCCCcc-HHHHHHHHHHHHHHHHhcCCCCCEEEEecCchHhHHHHHHHHHhcCCCceEE
Confidence            44 4688 999999 4689999999999995   479999999999999999999999999999986

>1j0a_A 1-aminocyclopropane-1-carboxylate deaminase; PLP dependent, lyase; HET: PLP; 2.50A {Pyrococcus horikoshii} SCOP: c.79.1.1 PDB: 1j0b_A*

Probab=100.00  E-value=8.5e-46  Score=313.22  Aligned_cols=196  Identities=22%  Similarity=0.210  Sum_probs=175.3

Q ss_pred             ccchhhhhhccccCCcceecccccCCCCceEEEEeCCCCC--CCChhhHHHHHHHHHHHHcCCCCCCCeEEEee--CCCc
Q 028618            5 SSNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEP--CSSVKDRIGYSMISDAEAKGLITPGESVLIEP--TSGN   80 (206)
Q Consensus         5 ~~~~~~~i~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~p--tGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~a--SsGN   80 (206)
                      .++.++++...+++|||++++++++..|++||+|+|++||  +||||+|.+.+++.+++++|.     ++||++  |+||
T Consensus         8 ~l~~~~~i~~~~~~TPL~~~~~l~~~~g~~i~~K~E~~~p~~~gs~K~R~~~~~i~~a~~~G~-----~~vv~~G~ssGN   82 (325)
T 1j0a_A            8 LLAKFPRVELIPWETPIQYLPNISREIGADVYIKRDDLTGLGIGGNKIRKLEYLLGDALSKGA-----DVVITVGAVHSN   82 (325)
T ss_dssp             HHTTCCCCCCCCSCCCEEECHHHHHHHTSEEEEEEGGGSCSTTCSTHHHHHHHHHHHHHHTTC-----SEEEEECCTTCH
T ss_pred             hhccCCCcccccCCCCceEhhhhhhhhCCEEEEEecccCCCCCCchHHHHHHHHHHHHHHcCC-----CEEEEcCCcchH
Confidence            3456778899999999999999988778999999999999  899999999999999999986     578886  9999


Q ss_pred             hHHHHHHHHHHCCCcEEEEeCCCC-CHHHHHHHHHcCCEEEEeCCCCCh---HHHHHHHHHHHHhCCCeE-EcCCCCCCc
Q 028618           81 TGIGLAFMAAAKQYRLIITMPASM-SLERRIILRAFGAELVLTDPAKGM---KGAVQKAEEILAKTPNAY-MLQQFENPA  155 (206)
Q Consensus        81 ~g~alA~~a~~~g~~~~ivvp~~~-~~~~~~~~~~~Ga~v~~~~~~~~~---~~~~~~a~~~~~~~~~~~-~~~~~~~~~  155 (206)
                      ||+|+|++|+.+|++|++|||+++ ++.|++.++.+||+|+.++.+.+.   .++.+.+++++++.+..| +.++++|+.
T Consensus        83 ~g~alA~~a~~~G~~~~iv~p~~~~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~~~~a~~l~~~~~~~~~~p~~~~n~~  162 (325)
T 1j0a_A           83 HAFVTGLAAKKLGLDAILVLRGKEELKGNYLLDKIMGIETRVYDAKDSFELMKYAEEIAEELKREGRKPYVIPPGGASPI  162 (325)
T ss_dssp             HHHHHHHHHHHTTCEEEEEEESCCCSCHHHHHHHHTTCEEEEESCCSTTTHHHHHHHHHHHHTTSSCCEEEECGGGCSHH
T ss_pred             HHHHHHHHHHHhCCcEEEEECCCCCCCchHHHHHHCCCEEEEeCcchhhhhhHHHHHHHHHHHHcCCceEEEcCCCCCHH
Confidence            999999999999999999999999 999999999999999999987532   267788888888765534 456778888


Q ss_pred             cHHHHHHhHHHHHHhhhCCCCCEEEEccCcchHHHHHHHHHHhcCCCCeEC
Q 028618          156 NPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKVR  206 (206)
Q Consensus       156 ~~~~g~~t~~~Ei~~q~~~~~d~vv~~vG~Gg~~aGi~~~~k~~~p~~~vi  206 (206)
                      + ..||.|++.||++|++..||+||+|+|||||++|++.++|+.+|++|||
T Consensus       163 ~-~~g~~t~~~Ei~~q~~~~~d~vv~~vGtGGt~~Gi~~~lk~~~~~~~vi  212 (325)
T 1j0a_A          163 G-TLGYVRAVGEIATQSEVKFDSIVVAAGSGGTLAGLSLGLSILNEDIRPV  212 (325)
T ss_dssp             H-HTHHHHHHHHHHHHCCCCCSEEEEEESSSHHHHHHHHHHHHTTCCCEEE
T ss_pred             H-HHHHHHHHHHHHHhhCCCCCEEEEeCCchHhHHHHHHHHHhcCCCceEE
Confidence            7 4689999999999997689999999999999999999999999999986

>4d9b_A D-cysteine desulfhydrase; fold type II PLP-dependent enzyme or tryptophan synthase BET like family, PLP dependent enzyme, lyase; HET: PMP; 1.67A {Salmonella typhimurium} PDB: 4d96_A* 4d9c_A* 4d9e_A* 4d9f_A* 4d97_A* 4d8w_A* 4d8u_A* 4d8t_A* 4d92_A* 4d99_A*

Probab=100.00  E-value=6.9e-45  Score=309.70  Aligned_cols=198  Identities=18%  Similarity=0.195  Sum_probs=170.6

Q ss_pred             ccccchhhhhhccccCCcceecccccCCCCceEEEEeCCCCC--CCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeC--C
Q 028618            3 VESSNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEP--CSSVKDRIGYSMISDAEAKGLITPGESVLIEPT--S   78 (206)
Q Consensus         3 ~~~~~~~~~i~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~p--tGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aS--s   78 (206)
                      .+.+..++++...+++|||+++++|++.+|++||+|+|++||  +||||+|++.+++.+++++|.     ++||++|  +
T Consensus        17 ~~~~~a~~ri~~~~~~TPL~~~~~l~~~~g~~v~~K~E~l~p~~~gs~K~R~~~~~l~~a~~~G~-----~~vv~~s~ts   91 (342)
T 4d9b_A           17 LHHLTRFPRLEFIGAPTPLEYLPRLSDYLGREIYIKRDDVTPIAMGGNKLRKLEFLVADALREGA-----DTLITAGAIQ   91 (342)
T ss_dssp             TGGGGGSCCCCSSCSCCCEEECHHHHHHHTSCEEEEEGGGCSSTTCCTHHHHHHHHHHHHHHTTC-----CEEEEEEETT
T ss_pred             cchhccCCcccccCCCCceeEhhhhHHhhCCEEEEEeCCCCCCCCcchHHHhHHHHHHHHHHcCC-----CEEEEcCCcc
Confidence            445566778999999999999999988888999999999999  999999999999999999987     5788886  7


Q ss_pred             CchHHHHHHHHHHCCCcEEEEeCCCCCH--------HHHHHHHHcCCEEEEeCCCCChHHHH-HHHHHHHHhCCCeEEc-
Q 028618           79 GNTGIGLAFMAAAKQYRLIITMPASMSL--------ERRIILRAFGAELVLTDPAKGMKGAV-QKAEEILAKTPNAYML-  148 (206)
Q Consensus        79 GN~g~alA~~a~~~g~~~~ivvp~~~~~--------~~~~~~~~~Ga~v~~~~~~~~~~~~~-~~a~~~~~~~~~~~~~-  148 (206)
                      ||||+|+|++|+.+|++|++|||++++.        .|++.++.+||+|+.++...+.+++. +.+++++++.+..|++ 
T Consensus        92 GN~g~alA~aa~~~G~~~~iv~p~~~~~~~~~~~~~~k~~~~~~~GA~V~~~~~~~~~~~~~~~~a~~l~~~~~~~~~~p  171 (342)
T 4d9b_A           92 SNHVRQTAAVAAKLGLHCVALLENPIGTTAENYLTNGNRLLLDLFNTQIEMCDALTDPDAQLQTLATRIEAQGFRPYVIP  171 (342)
T ss_dssp             CHHHHHHHHHHHHHTCEEEEEEECTTCCCCHHHHHSHHHHHHHHTTCEEEECSCCSSHHHHHHHHHHHHHHTTCCEEECC
T ss_pred             cHHHHHHHHHHHHhCCcEEEEEeCCCCCccccccccchHHHHHHCCCEEEEECchhhHHHHHHHHHHHHHhcCCceEEeC
Confidence            9999999999999999999999998773        58999999999999999875455555 4566777665433432 


Q ss_pred             CCCCCCccHHHHHHhHHHHHHhhhC--CCCCEEEEccCcchHHHHHHHHHHhcCCCCeEC
Q 028618          149 QQFENPANPKIHYETTGPELWKGSG--GRIDALVSGIGTGGTITGAGKFLKEKNPNIKVR  206 (206)
Q Consensus       149 ~~~~~~~~~~~g~~t~~~Ei~~q~~--~~~d~vv~~vG~Gg~~aGi~~~~k~~~p~~~vi  206 (206)
                      .++.|+.+ ..||.|++.||++|++  ..||+||+|+|||||++|++.++|+.+|++|||
T Consensus       172 ~~~~n~~~-~~G~~t~~~EI~~q~~~~~~~d~vv~~vGtGGt~aGi~~~~k~~~~~~~vi  230 (342)
T 4d9b_A          172 VGGSSALG-AMGYVESALEIAQQCEEVVGLSSVVVASGSAGTHAGLAVGLEHLMPDVELI  230 (342)
T ss_dssp             GGGCSHHH-HHHHHHHHHHHHHHHTTTCCCCEEEEEESSSHHHHHHHHHHHHHCTTSEEE
T ss_pred             CCCCChHH-HHHHHHHHHHHHHHHhccCCCCEEEEeCCCCHHHHHHHHHHHhhCCCCeEE
Confidence            34456655 5699999999999996  479999999999999999999999999999986

>1wkv_A Cysteine synthase; homodimer, open alpha/beta folding, transferase; HET: PLP; 2.00A {Aeropyrum pernix} SCOP: c.79.1.1

Probab=100.00  E-value=1.8e-44  Score=311.38  Aligned_cols=184  Identities=25%  Similarity=0.342  Sum_probs=166.4

Q ss_pred             cCCcceecccccCCCCceEEEEeCCCCC-CCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCCc
Q 028618           17 GNTPLVYLNNIVNGCVARIAAKLEMMEP-CSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYR   95 (206)
Q Consensus        17 ~~TPl~~~~~l~~~~g~~i~~K~E~~~p-tGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~   95 (206)
                      .+|||++++++++. |.+||+|+|++|| |||||+|++.+++..+.  +.+.++ ++|+++|+||||+|+|++|+++|++
T Consensus        95 ~~TPL~~l~~Ls~~-g~~IylK~E~lnp~tGS~K~R~a~~~i~~l~--~a~~~g-~~Iv~assGNhG~AlA~aaa~~Gl~  170 (389)
T 1wkv_A           95 KPTPLVRSRLQLPN-GVRVWLKLEWYNPFSLSVKDRPAVEIISRLS--RRVEKG-SLVADATSSNFGVALSAVARLYGYR  170 (389)
T ss_dssp             CSCCEEECCCCCST-TEEEEEEEGGGSTTTSBTTHHHHHHHHHHHT--TTSCTT-CEEEEECCHHHHHHHHHHHHHTTCE
T ss_pred             CCCCeEEccccccC-CCeEEEEEcCCCCCcCChHHHHHHHHHHHHH--HHHhcC-CEEEEECCcHHHHHHHHHHHHcCCe
Confidence            57999999999876 8899999999999 99999999999999854  333445 6899999999999999999999999


Q ss_pred             EEEEeCCCCCHHHHHHHHHcCCEEE-EeCCCCChHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHHHHHHhhhC-
Q 028618           96 LIITMPASMSLERRIILRAFGAELV-LTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSG-  173 (206)
Q Consensus        96 ~~ivvp~~~~~~~~~~~~~~Ga~v~-~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~q~~-  173 (206)
                      |++|||+++++.++.+|+.+||+|+ .++.. .++++.+.+++++++. +++|++||+||.+++.||+|++.||++|+. 
T Consensus       171 ~~ivmp~~~~~~k~~~~~~~GAeVv~~v~~~-~~~da~~~a~~~~~~~-g~~~~~p~~N~~~~~~~~~t~g~Ei~~Q~~~  248 (389)
T 1wkv_A          171 ARVYLPGAAEEFGKLLPRLLGAQVIVDPEAP-STVHLLPRVMKDSKNE-GFVHVNQFYNDANFEAHMRGTAREIFVQSRR  248 (389)
T ss_dssp             EEEEEETTSCHHHHHHHHHTTCEEEEETTCS-SSGGGHHHHHHHHHHH-CCEECCTTTCHHHHHHHHHTHHHHHHHHHHH
T ss_pred             EEEEECCCCCHHHHHHHHHcCCEEEEEcCCC-CHHHHHHHHHHHHHcc-CcEecCcCCChHHHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999999999999 78732 2678889999988875 789999999999988999999999999984 


Q ss_pred             --CCCCEEEEccCcchHHHHHHHHHHhcCCCCeEC
Q 028618          174 --GRIDALVSGIGTGGTITGAGKFLKEKNPNIKVR  206 (206)
Q Consensus       174 --~~~d~vv~~vG~Gg~~aGi~~~~k~~~p~~~vi  206 (206)
                        ..||+||+|+|+||+++|++.+|++.+|++|||
T Consensus       249 ~g~~~D~vv~~vG~GG~~~Gi~~~~k~~~p~vrvi  283 (389)
T 1wkv_A          249 GGLALRGVAGSLGTSGHMSAAAFYLQSVDPSIRAV  283 (389)
T ss_dssp             TTCCEEEEEECCSSSHHHHHHHHHHHHHCTTCEEE
T ss_pred             cCCCCCEEEEeCCchHhHHHHHHHHHHhCCCCeEE
Confidence              369999999999999999999999999999986

>4d9i_A Diaminopropionate ammonia-lyase; fold type II PLP-dependent enzyme, tryptophan synthase beta like PLP-dependent enzymes superfamily; HET: IT1; 2.00A {Escherichia coli} PDB: 4d9g_A* 4d9n_A* 4d9k_A* 4d9m_A*

Probab=100.00  E-value=1.1e-44  Score=314.22  Aligned_cols=190  Identities=22%  Similarity=0.205  Sum_probs=167.3

Q ss_pred             ccccCCcceecccccCCCC-ceEEEEeCCCC-CCCChhhHHHHHHHHHHH--HcCC----CC-------CCCe-EEEeeC
Q 028618           14 ELIGNTPLVYLNNIVNGCV-ARIAAKLEMME-PCSSVKDRIGYSMISDAE--AKGL----IT-------PGES-VLIEPT   77 (206)
Q Consensus        14 ~~~~~TPl~~~~~l~~~~g-~~i~~K~E~~~-ptGS~K~R~a~~~~~~a~--~~g~----~~-------~~~~-~vv~aS   77 (206)
                      ..+++|||+++++|++.+| .+||+|+|++| |+||||+|++.+++.++.  +.|.    +.       .+.+ +||++|
T Consensus        40 ~~~~~TPL~~~~~l~~~~g~~~i~~K~E~~~~ptgSfK~Rga~~~i~~~~~~~~G~~~~~l~~e~l~~~~~~~~~vv~aS  119 (398)
T 4d9i_A           40 AGYRPTPLCALDDLANLFGVKKILVKDESKRFGLNAFXMLGGAYAIAQLLCEKYHLDIETLSFEHLKNAIGEKMTFATTT  119 (398)
T ss_dssp             TTCCCCCEEECHHHHHHHTSSEEEEEEGGGSTTTTBSTHHHHHHHHHHHHHHHHTCCGGGCCHHHHHHCCSCCCEEEEEC
T ss_pred             CCCCCCCceehHHHHHHhCCCcEEEEECCCCCCCCcchhhhhHHHHHHHHHHhhcccccccchhhhhhhccCCCEEEEEC
Confidence            4578999999999998888 59999999999 999999999999999884  3331    00       1125 899999


Q ss_pred             CCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEcCC-----CC
Q 028618           78 SGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQ-----FE  152 (206)
Q Consensus        78 sGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~-----~~  152 (206)
                      +||||+|+|++|+.+|++|+||||+++++.|+++++.+||+|+.++.+  ++++.+.+++++++. +++|++|     |+
T Consensus       120 sGNhg~a~A~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~Vv~v~~~--~~~a~~~a~~~~~~~-g~~~v~~~~~~g~~  196 (398)
T 4d9i_A          120 DGNHGRGVAWAAQQLGQNAVIYMPKGSAQERVDAILNLGAECIVTDMN--YDDTVRLTMQHAQQH-GWEVVQDTAWEGYT  196 (398)
T ss_dssp             SSHHHHHHHHHHHHHTCEEEEEECTTCCHHHHHHHHTTTCEEEECSSC--HHHHHHHHHHHHHHH-TCEECCSSCBTTBC
T ss_pred             CCHHHHHHHHHHHHcCCCEEEEEeCCCCHHHHHHHHHcCCEEEEECCC--HHHHHHHHHHHHHHc-CCEEecCcccCCcC
Confidence            999999999999999999999999999999999999999999999986  889999999998887 7899986     65


Q ss_pred             -CCccHHHHHHhHHHHHHhhhCCC---CCEEEEccCcchHHHHHHHHHHhc--CCCCeEC
Q 028618          153 -NPANPKIHYETTGPELWKGSGGR---IDALVSGIGTGGTITGAGKFLKEK--NPNIKVR  206 (206)
Q Consensus       153 -~~~~~~~g~~t~~~Ei~~q~~~~---~d~vv~~vG~Gg~~aGi~~~~k~~--~p~~~vi  206 (206)
                       |+.+.+.||.|++.||++|++..   ||+||+|+|+||+++|++.++++.  .|+++||
T Consensus       197 ~~~~~~~~G~~t~~~Ei~~q~~~~g~~~d~vvvpvG~GG~~aGi~~~~k~~~~~~~~~vi  256 (398)
T 4d9i_A          197 KIPTWIMQGYATLADEAVEQMREMGVTPTHVLLQAGVGAMAGGVLGYLVDVYSPQNLHSI  256 (398)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTTCCCSEEEEECSSSHHHHHHHHHHHHHHCTTSCEEE
T ss_pred             CCCchhhhhHHHHHHHHHHHhhhcCCCCCEEEEecCccHHHHHHHHHHHHhcCCCCCEEE
Confidence             45566889999999999998544   999999999999999999999876  4778875

>1tzj_A ACC deaminase, 1-aminocyclopropane-1-carboxylate deaminase; substrate, PLP, crystal, complex, hydrolase; HET: PLP; 1.99A {Pseudomonas SP} SCOP: c.79.1.1 PDB: 1rqx_A* 1tz2_A* 1tyz_A* 1tzk_A* 1tzm_A*

Probab=100.00  E-value=3.2e-44  Score=304.85  Aligned_cols=194  Identities=18%  Similarity=0.134  Sum_probs=167.4

Q ss_pred             cchhhhhhccccCCcceecccccCCC-C-ceEEEEeCCCC-C--CCChhhHHHHHHHHHHHHcCCCCCCCeEEEe--eCC
Q 028618            6 SNIAKDVTELIGNTPLVYLNNIVNGC-V-ARIAAKLEMME-P--CSSVKDRIGYSMISDAEAKGLITPGESVLIE--PTS   78 (206)
Q Consensus         6 ~~~~~~i~~~~~~TPl~~~~~l~~~~-g-~~i~~K~E~~~-p--tGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~--aSs   78 (206)
                      ++.++++...+++|||++++++++.+ | .+||+|+|++| |  +||||+|++.+++.++.++|.     ++||+  +|+
T Consensus         3 ~~~~~~i~~~~~~TPL~~~~~l~~~~~g~~~i~~K~E~~n~p~~~gs~K~R~a~~~l~~a~~~g~-----~~vv~~Gass   77 (338)
T 1tzj_A            3 LQRFPRYPLTFGPTPIQPLARLSKHLGGKVHLYAKREDCNSGLAFGGNKTRKLEYLIPEALAQGC-----DTLVSIGGIQ   77 (338)
T ss_dssp             GGGSCCCCCSSSSCCEEECHHHHHHTTSSSEEEEEEGGGSCSSTTCCHHHHHHHTTHHHHHHTTC-----CEEEEEEETT
T ss_pred             cccCCccccCCCCCccEEHHHHHHhhCCCceEEEEeCCCCCCCCCCchHHHHHHHHHHHHHHcCC-----CEEEEcCCch
Confidence            34567889999999999999998877 7 89999999996 8  999999999999999998886     57888  799


Q ss_pred             CchHHHHHHHHHHCCCcEEEEeCCCCCHH--------HHHHHHHcCCEEEEeCCCCChH---HHHHHHHHHHHhCCCeEE
Q 028618           79 GNTGIGLAFMAAAKQYRLIITMPASMSLE--------RRIILRAFGAELVLTDPAKGMK---GAVQKAEEILAKTPNAYM  147 (206)
Q Consensus        79 GN~g~alA~~a~~~g~~~~ivvp~~~~~~--------~~~~~~~~Ga~v~~~~~~~~~~---~~~~~a~~~~~~~~~~~~  147 (206)
                      ||||+|+|++|+.+|++|++|||++.++.        |+++++.+||+|+.++.+.+..   .+.+.+++++++.+..++
T Consensus        78 GN~g~alA~~a~~~G~~~~iv~p~~~~~~~~~~~~~~k~~~~~~~GA~V~~~~~~~~~~~~~~~~~~a~~l~~~~~~~~~  157 (338)
T 1tzj_A           78 SNQTRQVAAVAAHLGMKCVLVQENWVNYSDAVYDRVGNIQMSRILGADVRLVPDGFDIGFRRSWEDALESVRAAGGKPYA  157 (338)
T ss_dssp             CHHHHHHHHHHHHHTCEEEEEEECCSSCCCTTTTTSHHHHHHHHTTCEEEECCC-------CHHHHHHHHHHHTTCCEEE
T ss_pred             hHHHHHHHHHHHHhCCceEEEecCCCCccccccccCccHHHHHhCCCEEEEeCCcchhhHHHHHHHHHHHHHhcCCceEE
Confidence            99999999999999999999999988765        9999999999999999873211   246778888887654454


Q ss_pred             -cCC-CCCCccHHHHHHhHHHHHHhhhC---CCCCEEEEccCcchHHHHHHHHHHhc-CCCCeEC
Q 028618          148 -LQQ-FENPANPKIHYETTGPELWKGSG---GRIDALVSGIGTGGTITGAGKFLKEK-NPNIKVR  206 (206)
Q Consensus       148 -~~~-~~~~~~~~~g~~t~~~Ei~~q~~---~~~d~vv~~vG~Gg~~aGi~~~~k~~-~p~~~vi  206 (206)
                       .++ ++||.+ ..||.|++.||++|+.   ..||+||+|+|||||++|++.++|+. +|+ |||
T Consensus       158 ~p~~~~~n~~~-~~g~~t~~~Ei~~q~~~~~~~~d~vv~~vG~GGt~~Gi~~~~k~~g~~~-~vi  220 (338)
T 1tzj_A          158 IPAGCSDHPLG-GLGFVGFAEEVRAQEAELGFKFDYVVVCSVTGSTQAGMVVGFAADGRAD-RVI  220 (338)
T ss_dssp             CCGGGTSSTTT-TTHHHHHHHHHHHHHHHHTSCCSEEEEEESSSHHHHHHHHHHHTTTCGG-GEE
T ss_pred             eCCCcCCCccc-HHHHHHHHHHHHHHHHhcCCCCCEEEEecCCcHHHHHHHHHHHhhCCCC-eEE
Confidence             455 899998 5799999999999995   47999999999999999999999998 888 875

>1v8z_A Tryptophan synthase beta chain 1; beta+alpha, riken structural genomics/proteomics initiative, structural genomics, lyase; HET: PLP; 2.21A {Pyrococcus furiosus} SCOP: c.79.1.1 PDB: 1wdw_B*

Probab=100.00  E-value=3.3e-41  Score=291.26  Aligned_cols=191  Identities=20%  Similarity=0.214  Sum_probs=158.9

Q ss_pred             hhhhccccC-CcceecccccCCCC-ceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEE-eeCCCchHHHHH
Q 028618           10 KDVTELIGN-TPLVYLNNIVNGCV-ARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLI-EPTSGNTGIGLA   86 (206)
Q Consensus        10 ~~i~~~~~~-TPl~~~~~l~~~~g-~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv-~aSsGN~g~alA   86 (206)
                      +.+.+.+++ |||+++++|++.+| ++||+|+|++|||||||+|++.+++..+.++|.     ..+| ++|+||||+|+|
T Consensus        41 ~~~~~~ig~~TPL~~~~~l~~~~g~~~i~~K~E~~~ptGSfK~R~a~~~i~~a~~~g~-----~~vv~~~ssGN~g~a~A  115 (388)
T 1v8z_A           41 YYLKTWAGRPTPLYYAKRLTEKIGGAKIYLKREDLVHGGAHKTNNAIGQALLAKFMGK-----TRLIAETGAGQHGVATA  115 (388)
T ss_dssp             HHHHHTTCCSCCEEECHHHHHHHTSSEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTC-----CEEEEEESSSHHHHHHH
T ss_pred             HHHHHhcCCCCCceehHhhHhhcCCceEEEEeccCCCCCCHHHHHHHHHHHHHHHcCC-----CEEEEecCchHHHHHHH
Confidence            345567865 99999999988876 899999999999999999999999998888885     3455 589999999999


Q ss_pred             HHHHHCCCcEEEEeCCC-CC--HHHHHHHHHcCCEEEEeCC-CCChHHHHHHHHH-HHHhCCCeEE-cCCCCCCcc----
Q 028618           87 FMAAAKQYRLIITMPAS-MS--LERRIILRAFGAELVLTDP-AKGMKGAVQKAEE-ILAKTPNAYM-LQQFENPAN----  156 (206)
Q Consensus        87 ~~a~~~g~~~~ivvp~~-~~--~~~~~~~~~~Ga~v~~~~~-~~~~~~~~~~a~~-~~~~~~~~~~-~~~~~~~~~----  156 (206)
                      ++|+++|++|+||||+. .+  ..|+++++.+||+|+.++. ...++++.+.+.+ ++++.++.+| ++++.|+.+    
T Consensus       116 ~aa~~~G~~~~iv~p~~~~~~~~~~~~~~~~~GA~V~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~n~~p~~~~  195 (388)
T 1v8z_A          116 MAGALLGMKVDIYMGAEDVERQKMNVFRMKLLGANVIPVNSGSRTLKDAINEALRDWVATFEYTHYLIGSVVGPHPYPTI  195 (388)
T ss_dssp             HHHHHTTCEEEEEEEHHHHTTCHHHHHHHHHTTCEEEEECSTTSSHHHHHHHHHHHHHHHTTTEEECCCSSCSSTTHHHH
T ss_pred             HHHHHcCCcEEEEEcCCchhhhhhHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHhCCCceEecCCccCCCCchhH
Confidence            99999999999999985 23  4668999999999999986 3347888888754 5666555555 567666543    


Q ss_pred             HHHHHHhHHHHHHhhh----CCCCCEEEEccCcchHHHHHHHHHHhcCCCCeEC
Q 028618          157 PKIHYETTGPELWKGS----GGRIDALVSGIGTGGTITGAGKFLKEKNPNIKVR  206 (206)
Q Consensus       157 ~~~g~~t~~~Ei~~q~----~~~~d~vv~~vG~Gg~~aGi~~~~k~~~p~~~vi  206 (206)
                      +..||+|++.||++|+    +..||+||+|+|+||+++|++.+++. +|++|||
T Consensus       196 ~~~~~~t~~~Ei~~q~~~~~~~~~d~vvvpvG~GG~~aGi~~~~~~-~~~~~vi  248 (388)
T 1v8z_A          196 VRDFQSVIGREAKAQILEAEGQLPDVIVACVGGGSNAMGIFYPFVN-DKKVKLV  248 (388)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHSSCCSEEEEECSSSHHHHHHHGGGTT-CTTSEEE
T ss_pred             HHHHhHHHHHHHHHHHHHhcCCCCCEEEEecCccHhHHHHHHHHhh-CCCceEE
Confidence            2348999999999998    44699999999999999999999884 8999986

>1x1q_A Tryptophan synthase beta chain; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 2.50A {Thermus thermophilus}

Probab=100.00  E-value=1.1e-41  Score=296.91  Aligned_cols=189  Identities=19%  Similarity=0.193  Sum_probs=157.0

Q ss_pred             cccc-CCcceecccccCCC-CceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHHHH
Q 028618           14 ELIG-NTPLVYLNNIVNGC-VARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAA   91 (206)
Q Consensus        14 ~~~~-~TPl~~~~~l~~~~-g~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~alA~~a~~   91 (206)
                      .+++ +|||+++++|++.+ +.+||+|+|++|||||||+|++.+++..+.++|+    +..|+++|+||||+|+|++|++
T Consensus        72 ~~ig~~TPL~~~~~Ls~~~gg~~i~lK~E~l~ptGSfK~R~a~~~i~~a~~~g~----~~vI~~~ssGNhg~avA~aaa~  147 (418)
T 1x1q_A           72 QFAGRPTPLYHAKRLSEYWGGAQVFLKREDLLHTGAHKINNTLGQALLARRMGK----RRVIAETGAGQHGVSVATVAAL  147 (418)
T ss_dssp             HTTCCSCCEEECHHHHHHHTSSEEEEEEGGGSGGGBTTHHHHHHHHHHHHHHTC----CEEEEECSSSHHHHHHHHHHHH
T ss_pred             cccCCCCCcEEhHHhHhhcCCceEEEEEccCCcCccHHHHHHHHHHHHHHHcCC----CEEEEecCchHHHHHHHHHHHH
Confidence            5664 69999999998887 5899999999999999999999999998888875    2345568999999999999999


Q ss_pred             CCCcEEEEeCCCC---CHHHHHHHHHcCCEEEEeCC-CCChHHHHHHHHH-HHHhCCCeEEc-CCCCCCc----cHHHHH
Q 028618           92 KQYRLIITMPASM---SLERRIILRAFGAELVLTDP-AKGMKGAVQKAEE-ILAKTPNAYML-QQFENPA----NPKIHY  161 (206)
Q Consensus        92 ~g~~~~ivvp~~~---~~~~~~~~~~~Ga~v~~~~~-~~~~~~~~~~a~~-~~~~~~~~~~~-~~~~~~~----~~~~g~  161 (206)
                      +|++|+||||+..   +..|+.+++.+||+|+.++. +.+++++.+.+.+ ++++.++.+|+ +++.|+.    ++..||
T Consensus       148 ~Gi~~~I~mp~~~~~~~~~kv~~~~~~GA~Vv~v~~~~~~~~~a~~~a~~~~~~~~~~~~~i~~~~~n~~p~~~~v~~gq  227 (418)
T 1x1q_A          148 FGLECVVYMGEEDVRRQALNVFRMKLLGAEVRPVAAGSRTLKDATNEAIRDWITNVRTTFYILGSVVGPHPYPMMVRDFQ  227 (418)
T ss_dssp             HTCEEEEEEEHHHHHTCHHHHHHHHHTTCEEEEECSTTSSHHHHHHHHHHHHHHTTTTEEECCCCSSSSTTHHHHHHHHH
T ss_pred             cCCCEEEEECCCcchhhhHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHhCCCcEEEeCCccCCCCcHHHHHHHH
Confidence            9999999999863   23678899999999999984 2347888887754 56665565664 5554443    223599


Q ss_pred             HhHHHHHHhhh----CCCCCEEEEccCcchHHHHHHHHHHhc-CCCCeEC
Q 028618          162 ETTGPELWKGS----GGRIDALVSGIGTGGTITGAGKFLKEK-NPNIKVR  206 (206)
Q Consensus       162 ~t~~~Ei~~q~----~~~~d~vv~~vG~Gg~~aGi~~~~k~~-~p~~~vi  206 (206)
                      +|++.||++|+    +..||+||+|+|+||+++|++.+||++ +|++|||
T Consensus       228 ~t~~~Ei~~Ql~~~~~~~~D~vvvpvGgGG~~~Gi~~~~k~l~~p~~~vi  277 (418)
T 1x1q_A          228 SVIGEEVKRQSLELFGRLPDALIAAVGGGSNAIGLFAPFAYLPEGRPKLI  277 (418)
T ss_dssp             THHHHHHHHHHHHHHSSCCSEEEEECSSSSHHHHHHHHHHTSCTTCCEEE
T ss_pred             HHHHHHHHHHHHhhcCCCCCEEEEecCCcHhHHHHHHHHHHhCCCCCeEE
Confidence            99999999998    345999999999999999999999987 8999986

>1qop_B Tryptophan synthase beta chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.79.1.1 PDB: 1k7e_B* 1k7f_B* 1kfb_B* 1k3u_B* 1tjp_B* 1wbj_B* 2cli_B* 2clk_B* 2cll_B* 2j9x_B* 3cep_B* 1kfc_B* 1k8x_B* 1kfj_B* 1kfk_B* 2rh9_B* 2rhg_B* 2j9y_B* 1cw2_B* 1a5s_B* ...

Probab=100.00  E-value=1.2e-41  Score=294.87  Aligned_cols=189  Identities=20%  Similarity=0.185  Sum_probs=158.2

Q ss_pred             hhcccc-CCcceecccccCCCCceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEe-eCCCchHHHHHHHH
Q 028618           12 VTELIG-NTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIE-PTSGNTGIGLAFMA   89 (206)
Q Consensus        12 i~~~~~-~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~-aSsGN~g~alA~~a   89 (206)
                      +..+++ +|||+++++|++.+|.+||+|+|++|||||||+|++.+++..+.++|.     .++|+ +|+||||+|+|++|
T Consensus        48 ~~~~ig~~TPL~~~~~l~~~~g~~i~lK~E~l~ptGSfK~R~a~~~~~~a~~~g~-----~~vi~e~ssGNhg~a~A~aa  122 (396)
T 1qop_B           48 LKNYAGRPTALTKCQNITAGTRTTLYLKREDLLHGGAHKTNQVLGQALLAKRMGK-----SEIIAETGAGQHGVASALAS  122 (396)
T ss_dssp             HHHTTCCSCCEEECHHHHTTSSEEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTC-----CEEEEEESSSHHHHHHHHHH
T ss_pred             HHHhCCCCCCcEEhhhhhhccCCeEEEEeccCCCCCcHHHHHHHHHHHHHHHcCc-----CEEEEecCchHHHHHHHHHH
Confidence            445776 599999999999889999999999999999999999999999988886     35665 89999999999999


Q ss_pred             HHCCCcEEEEeCCC-CCH--HHHHHHHHcCCEEEEeCC-CCChHHHHHHHHH-HHHhCCCeEE-cCCCCCCc----cHHH
Q 028618           90 AAKQYRLIITMPAS-MSL--ERRIILRAFGAELVLTDP-AKGMKGAVQKAEE-ILAKTPNAYM-LQQFENPA----NPKI  159 (206)
Q Consensus        90 ~~~g~~~~ivvp~~-~~~--~~~~~~~~~Ga~v~~~~~-~~~~~~~~~~a~~-~~~~~~~~~~-~~~~~~~~----~~~~  159 (206)
                      +++|++|+||||+. .+.  .|+.+|+.+||+|+.++. +.+++++...+.+ ++++.++.+| ++++.|+.    ++..
T Consensus       123 ~~~G~~~~i~mp~~~~~~~~~~~~~~~~~GA~V~~v~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~n~~p~~~~v~~  202 (396)
T 1qop_B          123 ALLGLKCRIYMGAKDVERQSPNVFRMRLMGAEVIPVHSGSATLKDACNEALRDWSGSYETAHYMLGTAAGPHPYPTIVRE  202 (396)
T ss_dssp             HHHTCEEEEEEEHHHHHHCHHHHHHHHHTTCEEEEECSTTSSHHHHHHHHHHHHHHHTTTEEECCCSSCSSTTHHHHHHH
T ss_pred             HHCCCcEEEEEcCCchhhhhhHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHhccCCcEEEeCCcCCCCCchHHHHH
Confidence            99999999999985 433  457899999999999985 3347888888876 4666556555 45554443    2234


Q ss_pred             HHHhHHHHHHhhh----CCCCCEEEEccCcchHHHHHHHHHHhcCCCCeEC
Q 028618          160 HYETTGPELWKGS----GGRIDALVSGIGTGGTITGAGKFLKEKNPNIKVR  206 (206)
Q Consensus       160 g~~t~~~Ei~~q~----~~~~d~vv~~vG~Gg~~aGi~~~~k~~~p~~~vi  206 (206)
                      ||+|++.||++|+    +..||+||+|+|+||+++|++.+++ .+|++|||
T Consensus       203 g~~t~~~Ei~~Ql~~~~~~~~d~vvvpvG~GG~~~Gi~~~~~-~~~~~~vi  252 (396)
T 1qop_B          203 FQRMIGEETKAQILDKEGRLPDAVIACVGGGSNAIGMFADFI-NDTSVGLI  252 (396)
T ss_dssp             TTTHHHHHHHHHHHHHHSSCCSEEEEECSSSHHHHHHHGGGT-TCTTSEEE
T ss_pred             HHhHHHHHHHHHHHHhcCCCCCEEEEcCCchHHHHHHHHHHh-cCCCCEEE
Confidence            8999999999998    5579999999999999999999998 48999986

>1e5x_A Threonine synthase; threonine biosynthesis, PLP enzyme, S-adenosyl-methionine, allostery; 2.25A {Arabidopsis thaliana} SCOP: c.79.1.1 PDB: 2c2b_A* 2c2g_A*

Probab=100.00  E-value=6.6e-41  Score=296.60  Aligned_cols=187  Identities=19%  Similarity=0.129  Sum_probs=165.0

Q ss_pred             hhccccCCcceecccccCC-CC-ceEEEEeCCCCCCCChhhHHHHHHHHHHHH---cCCCCCCCeEEEeeCCCchHHHHH
Q 028618           12 VTELIGNTPLVYLNNIVNG-CV-ARIAAKLEMMEPCSSVKDRIGYSMISDAEA---KGLITPGESVLIEPTSGNTGIGLA   86 (206)
Q Consensus        12 i~~~~~~TPl~~~~~l~~~-~g-~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~---~g~~~~~~~~vv~aSsGN~g~alA   86 (206)
                      +...+++|||++++++++. +| .+||+|+|++|||||||||++.+++..+.+   ++.   +..+||++|+||||.|+|
T Consensus       124 v~l~~g~TPLv~l~~L~~~~lg~~~l~~K~E~~nPTGSFKDRga~~~~~~l~~~~~~~~---g~~~Vv~aSsGNtG~AlA  200 (486)
T 1e5x_A          124 VSAFEGNSNLFWAERFGKQFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMKR---PVVGVGCASTGDTSAALS  200 (486)
T ss_dssp             CCCCCCCCCEEECHHHHHHHHCCSSEEEEETTSSTTSBTTHHHHHHHHHHHHHHHHTTC---CCCEEEECCCSHHHHHHH
T ss_pred             ccccCCCCCcEECcccchhhcCCCcEEEeeccCCCccCHHHHHHHHHHHHHHHHHHcCC---CCeEEEEcCCCHHHHHHH
Confidence            3445788999999999887 77 489999999999999999999988776543   331   126899999999999999


Q ss_pred             HHHHHCCCcEEEEeCCC-CCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHH
Q 028618           87 FMAAAKQYRLIITMPAS-MSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTG  165 (206)
Q Consensus        87 ~~a~~~g~~~~ivvp~~-~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~  165 (206)
                      ++|+++|++|+||+|.+ +++.|+.+++.+||+|+.++++  ++++.+.+++++++. ++++++++ |+.+ ..||.|++
T Consensus       201 ~~a~~~Gi~~~I~~P~~~~s~~k~~~~~~~GA~vi~v~g~--~dd~~~~a~~l~~~~-~~~~vns~-N~~~-i~gq~t~~  275 (486)
T 1e5x_A          201 AYCASAGIPSIVFLPANKISMAQLVQPIANGAFVLSIDTD--FDGCMKLIREITAEL-PIYLANSL-NSLR-LEGQKTAA  275 (486)
T ss_dssp             HHHHHHTCCEEEEEEGGGCCHHHHHHHHHTTCEEEEEESC--HHHHHHHHHHHHHHS-CEEEGGGS-HHHH-HHHHTHHH
T ss_pred             HHHHHcCCeEEEEECCCCCCHHHHHHHHhCCCEEEEECCC--HHHHHHHHHHHHhcC-CEEEeCCC-CHHH-HHHHHHHH
Confidence            99999999999999997 9999999999999999999987  889999999998886 68889887 8887 57999999


Q ss_pred             HHHHhhhCC-CCCEEEEccCcchHHHHHHHHHHhcC------CCCeEC
Q 028618          166 PELWKGSGG-RIDALVSGIGTGGTITGAGKFLKEKN------PNIKVR  206 (206)
Q Consensus       166 ~Ei~~q~~~-~~d~vv~~vG~Gg~~aGi~~~~k~~~------p~~~vi  206 (206)
                      .||++|+++ .||+||+|+|+||+++|++.+|+++.      |..|||
T Consensus       276 ~Ei~~ql~~~~~D~vvvpvG~GG~i~Gi~~a~k~~~~~Gli~p~~rvi  323 (486)
T 1e5x_A          276 IEILQQFDWQVPDWVIVPGGNLGNIYAFYKGFKXCQELGLVDRIPRMV  323 (486)
T ss_dssp             HHHHHHTTSCCCSEEEEECSSTHHHHHHHHHHHHHHHTTSSSCCCEEE
T ss_pred             HHHHHHcCCCCCCEEEEeCCcHHHHHHHHHHHHHhhhhccCCCCCEEE
Confidence            999999965 59999999999999999999999864      777764

>2o2e_A Tryptophan synthase beta chain; amino-acid biosynthesis, tryptophan biosynthesis, structural genomics; 2.20A {Mycobacterium tuberculosis} PDB: 2o2j_A

Probab=100.00  E-value=5.1e-40  Score=286.59  Aligned_cols=189  Identities=23%  Similarity=0.235  Sum_probs=155.5

Q ss_pred             hcccc-CCcceecccccCCC-CceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHHH
Q 028618           13 TELIG-NTPLVYLNNIVNGC-VARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAA   90 (206)
Q Consensus        13 ~~~~~-~TPl~~~~~l~~~~-g~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~alA~~a~   90 (206)
                      ..+++ +|||+++++|++.+ +.+||+|+|++|||||||+|++.+++..+.++|+    +..|+++|+||||+|+|++|+
T Consensus        75 ~~~~g~~TPL~~~~~Ls~~~gg~~i~lK~E~lnptGSfK~R~a~~~~~~a~~~g~----~~vI~~~ssGNhG~A~A~aaa  150 (422)
T 2o2e_A           75 ANYAGRPSPLYEATRLSQHAGSARIFLKREDLNHTGSHKINNVLGQALLARRMGK----TRVIAETGAGQHGVATATACA  150 (422)
T ss_dssp             TTTSSCSCCEEECGGGGGGTTTCEEEEECGGGCCSSTTHHHHHHHHHHHHHHTTC----CEEEEEESSSHHHHHHHHHHH
T ss_pred             HHhCCCCCCeEEChhhHhhcCCCeEEEEEcCCCCCCcHHHHHHHHHHHHHHHcCC----CeEEEecCccHHHHHHHHHHH
Confidence            45664 59999999999988 4899999999999999999999999998888885    245567999999999999999


Q ss_pred             HCCCcEEEEeCCCCC---HHHHHHHHHcCCEEEEeCC-CCChHHHHHHHHH-HHHhCCCeEEc-CCCCCCc----cHHHH
Q 028618           91 AKQYRLIITMPASMS---LERRIILRAFGAELVLTDP-AKGMKGAVQKAEE-ILAKTPNAYML-QQFENPA----NPKIH  160 (206)
Q Consensus        91 ~~g~~~~ivvp~~~~---~~~~~~~~~~Ga~v~~~~~-~~~~~~~~~~a~~-~~~~~~~~~~~-~~~~~~~----~~~~g  160 (206)
                      ++|++|+||||+...   ..|+.+|+.+||+|+.++. +..++++...+.+ ++++.++.+|+ +++.++.    ++..|
T Consensus       151 ~~G~~~~I~mp~~~~~~q~~kv~~~~~~GA~Vv~v~~~~~~~~da~~~a~~~~~~~~~~~~yi~~s~~g~~p~~~~v~~~  230 (422)
T 2o2e_A          151 LLGLDCVIYMGGIDTARQALNVARMRLLGAEVVAVQTGSKTLKDAINEAFRDWVANADNTYYCFGTAAGPHPFPTMVRDF  230 (422)
T ss_dssp             HHTCEEEEEEEHHHHHHSHHHHHHHHHTTCEEEEECSTTSCHHHHHHHHHHHHHHHTTTEEECCCCSSSCCCCHHHHHHH
T ss_pred             HcCCcEEEEeCCCcchhhHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHhcCCCcEEEeCCccCCCCcHHHHHHH
Confidence            999999999998632   4677899999999999985 3348888887754 56665566664 4544322    33458


Q ss_pred             HHhHHHHHHhhh----CCCCCEEEEccCcchHHHHHHHHHHhcCCCCeEC
Q 028618          161 YETTGPELWKGS----GGRIDALVSGIGTGGTITGAGKFLKEKNPNIKVR  206 (206)
Q Consensus       161 ~~t~~~Ei~~q~----~~~~d~vv~~vG~Gg~~aGi~~~~k~~~p~~~vi  206 (206)
                      |.+++.||++|+    +..||+||+|+|+||+++|++.+++. .|++|||
T Consensus       231 q~t~g~Ei~~Ql~~~~~~~pD~vvvpvG~GG~~~Gi~~~~~~-~p~v~vi  279 (422)
T 2o2e_A          231 QRIIGMEARVQIQGQAGRLPDAVVACVGGGSNAIGIFHAFLD-DPGVRLV  279 (422)
T ss_dssp             TTHHHHHHHHHHHHHSSSCCSEEEEEGGGHHHHHTTSGGGTT-CTTCEEE
T ss_pred             HHHHHHHHHHHHHHhhCCCCCEEEEccCCchhHHHHHHHHhc-CCCCeEE
Confidence            999999999997    34599999999999999999888764 7889886

>1vb3_A Threonine synthase; PLP-dependent enzyme, lyase; HET: KPA; 2.20A {Escherichia coli} SCOP: c.79.1.1

Probab=100.00  E-value=3.5e-35  Score=256.48  Aligned_cols=173  Identities=16%  Similarity=0.128  Sum_probs=146.4

Q ss_pred             cCCcceecccccCCCCceEEEEeCCC-CCCCChhhHHHHHHH---HHHHHcCCCCCCCeEEEeeCCCchHHHHH-HHHHH
Q 028618           17 GNTPLVYLNNIVNGCVARIAAKLEMM-EPCSSVKDRIGYSMI---SDAEAKGLITPGESVLIEPTSGNTGIGLA-FMAAA   91 (206)
Q Consensus        17 ~~TPl~~~~~l~~~~g~~i~~K~E~~-~ptGS~K~R~a~~~~---~~a~~~g~~~~~~~~vv~aSsGN~g~alA-~~a~~   91 (206)
                      ++|||+++++       +||+ +|++ |||||||||++.+++   ..+ +++.    ..+|+++|+||||.|+| .+|++
T Consensus        82 ~~TPL~~l~~-------~i~~-~E~~~~pTgSfKdr~a~~l~~~l~~a-~~~~----~~~Iv~atsGNtG~A~A~~~a~~  148 (428)
T 1vb3_A           82 FPAPVANVES-------DVGC-LELFHGPTLAFKDFGGRFMAQMLTHI-AGDK----PVTILTATSGDTGAAVAHAFYGL  148 (428)
T ss_dssp             SCCCEEEEET-------TEEE-EECCCSTTSBTHHHHHHHHHHHHHHH-TTTC----CEEEEEECSSSHHHHHHHHTTTC
T ss_pred             CCCCeEEecC-------CeEE-eeccCCCcccHHHHHHHHHHHHHHHH-HhcC----CCEEEecCCchHHHHHHHHHhhh
Confidence            6899999864       6999 7777 699999999999885   444 2332    37899999999999999 59999


Q ss_pred             CCCcEEEEeCC-CCCHHHHHHHHHcCCEE--EEeCCCCChHHHHHHHHHHHHh-----CCCeEEcCCCCCCccHHHHHHh
Q 028618           92 KQYRLIITMPA-SMSLERRIILRAFGAEL--VLTDPAKGMKGAVQKAEEILAK-----TPNAYMLQQFENPANPKIHYET  163 (206)
Q Consensus        92 ~g~~~~ivvp~-~~~~~~~~~~~~~Ga~v--~~~~~~~~~~~~~~~a~~~~~~-----~~~~~~~~~~~~~~~~~~g~~t  163 (206)
                      +|++|+||||+ ++++.|+++|+.+||+|  +.++++  ++++.+.+++++++     ..+++++++ .|+.+ ..||.+
T Consensus       149 ~G~~~~I~~P~~~~s~~k~~~m~~~GA~V~~v~v~g~--~d~~~~~~~~~~~d~~~~~~~~~~~~n~-~n~~~-~~gq~t  224 (428)
T 1vb3_A          149 PNVKVVILYPRGKISPLQEKLFCTLGGNIETVAIDGD--FDACQALVKQAFDDEELKVALGLNSANS-INISR-LLAQIC  224 (428)
T ss_dssp             TTEEEEEEEETTCSCHHHHHHHHSCCTTEEEEEEESC--HHHHHHHHHHGGGCHHHHHHHTEECCST-TSHHH-HHHTTH
T ss_pred             cCCeEEEEECCCCCCHHHHHHHHhcCCeEEEEEeCCC--HHHHHHHHHHHHhchhhhhhcCeeeCCC-CCHHH-HHHHHH
Confidence            99999999999 49999999999999999  666665  88998888887653     135677776 46776 679999


Q ss_pred             HHHHHHhhhCC---CCCEEEEccCcchHHHHHHHHHHhcCCCCeEC
Q 028618          164 TGPELWKGSGG---RIDALVSGIGTGGTITGAGKFLKEKNPNIKVR  206 (206)
Q Consensus       164 ~~~Ei~~q~~~---~~d~vv~~vG~Gg~~aGi~~~~k~~~p~~~vi  206 (206)
                      ++.||++|+.+   .+|+||+|+|+||+++|++.+++...|..|||
T Consensus       225 ~~~Ei~~ql~~~g~~~d~vvvpvG~GG~i~G~~~a~~~g~p~~kii  270 (428)
T 1vb3_A          225 YYFEAVAQLPQETRNQLVVSVPSGNFGDLTAGLLAKSLGLPVKRFI  270 (428)
T ss_dssp             HHHHHHTTSCTTTTTSEEEEEECSSCHHHHHHHHHHHTTCCCSEEE
T ss_pred             HHHHHHHHcccccCCCCEEEEeCCchHHHHHHHHHHHcCCCCCeEE
Confidence            99999999964   59999999999999999999999888887875

>4f4f_A Threonine synthase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.90A {Brucella melitensis BV}

Probab=100.00  E-value=3.1e-32  Score=239.23  Aligned_cols=172  Identities=15%  Similarity=0.092  Sum_probs=143.4

Q ss_pred             CcceecccccCCCCceEEEEeCCCCCCCChhhHHHHHH---HHHHH-HcCCCCCCCeEEEeeCCCchHHH-HHHHHHHCC
Q 028618           19 TPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSM---ISDAE-AKGLITPGESVLIEPTSGNTGIG-LAFMAAAKQ   93 (206)
Q Consensus        19 TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~---~~~a~-~~g~~~~~~~~vv~aSsGN~g~a-lA~~a~~~g   93 (206)
                      |||+++.       .++|+|.|++|||||||||++.++   +..+. ++|.    ..+|+++||||||.+ +|++|++.|
T Consensus        94 ~pl~~l~-------~~~~~kee~~~PTgSFKDRga~~~~~~l~~a~~~~g~----~~~Vv~ASSGNtG~aa~aa~a~~~G  162 (468)
T 4f4f_A           94 CPLVQTD-------ANEFVLELFHGPTLAFKDVAMQLLARMMDYVLAQRGE----RATIVGATSGDTGGAAIEAFGGRDN  162 (468)
T ss_dssp             SCEEEEE-------TTEEEEECCCSTTSBTHHHHHHHHHHHHHHHHHHTTC----CEEEEEECSSHHHHHHHHHHTTCSS
T ss_pred             CceEEec-------CCeehHHhccCCcccHHHHHHHHHHHHHHHHHHhcCC----CcEEEEECCchHHHHHHHHHHhccC
Confidence            8888864       269999999999999999999999   66664 5554    258999999999955 466688999


Q ss_pred             CcEEEEeCCC-CCHHHHHHHHHcCC-EE--EEeCCCCChHHHHHHHHHHHHhCC-----CeEEcCCCCCCccHHHHHHhH
Q 028618           94 YRLIITMPAS-MSLERRIILRAFGA-EL--VLTDPAKGMKGAVQKAEEILAKTP-----NAYMLQQFENPANPKIHYETT  164 (206)
Q Consensus        94 ~~~~ivvp~~-~~~~~~~~~~~~Ga-~v--~~~~~~~~~~~~~~~a~~~~~~~~-----~~~~~~~~~~~~~~~~g~~t~  164 (206)
                      ++++||||++ +++.|+.+|+.+|+ +|  +.++++  ++++.+.+++++++.+     +++++|+ .|+.. +.|+.|+
T Consensus       163 i~~~I~~P~~~~s~~k~~~~~~~gganV~vv~v~g~--fdda~~~~k~~~~d~~~~~~~~~~~vns-in~~r-i~GQ~T~  238 (468)
T 4f4f_A          163 TDIFILFPNGRVSPVQQRQMTSSGFSNVHALSIEGN--FDDCQNLVKGMFNDLEFCDALSLSGVNS-INWAR-IMPQVVY  238 (468)
T ss_dssp             EEEEEEEETTCSCHHHHHHHHCSCCTTEEEEEEESC--HHHHHHHHHHHHHCHHHHHHHTEEECCT-TSHHH-HGGGHHH
T ss_pred             CcEEEEeCCCCCCHHHHHHHHhcCCCeEEEeecCCC--HHHHHHHHHHHHhccccccccceEeCCC-CCHHH-HHhHHHH
Confidence            9999999998 99999999999974 55  667776  8999999998877642     4677776 57776 6899999


Q ss_pred             HHHHHhhhCCCCCE---EEEccCcchHHHHHHHHHHhcCCCCeEC
Q 028618          165 GPELWKGSGGRIDA---LVSGIGTGGTITGAGKFLKEKNPNIKVR  206 (206)
Q Consensus       165 ~~Ei~~q~~~~~d~---vv~~vG~Gg~~aGi~~~~k~~~p~~~vi  206 (206)
                      +.||++|++ .+|.   |+||+|+||+++|++.+.+.-.|..|+|
T Consensus       239 ~~Ei~~ql~-~~d~~v~vvVPvG~GG~i~g~~~Ak~mGlPi~kli  282 (468)
T 4f4f_A          239 YFTAALSLG-APDRAVSFTVPTGNFGDIFAGYVAKRMGLPIEQLI  282 (468)
T ss_dssp             HHHHHHHTT-TTSSCEEEEEECSSSHHHHHHHHHHHHTCCEEEEE
T ss_pred             HHHHHHhcc-cCCCCeEEEEEeCCcHHHHHHHHHHHhCCCCCEEE
Confidence            999999995 7898   9999999999999998855445766764

>1kl7_A Threonine synthase; threonine synthesis, pyridoxal 5-phosphate, beta-family, MON lyase; HET: PLP; 2.70A {Saccharomyces cerevisiae} SCOP: c.79.1.1

Probab=99.98  E-value=2e-31  Score=236.58  Aligned_cols=180  Identities=17%  Similarity=0.067  Sum_probs=139.8

Q ss_pred             ccCCccee--cccccCCCCceEEEEeCCCCCCCChhhHHHHHHHH---HHH-HcCC-----CCCCCeEEEeeCCCchHHH
Q 028618           16 IGNTPLVY--LNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMIS---DAE-AKGL-----ITPGESVLIEPTSGNTGIG   84 (206)
Q Consensus        16 ~~~TPl~~--~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~~~---~a~-~~g~-----~~~~~~~vv~aSsGN~g~a   84 (206)
                      .+.|||++  ++++     .+||+|.|++|||||||||++.+++.   .+. ++|.     +.++ .+|+++||||||.|
T Consensus        94 ~g~TPLv~~~l~~l-----~~l~~K~e~~nPTgSFKDrga~~~~~~~~~a~~~~g~~~~~~~~~~-~~Iv~ATSGNtG~A  167 (514)
T 1kl7_A           94 DEVTPLVQNVTGDK-----ENLHILELFHGPTYAFKDVALQFVGNLFEYFLQRTNANLPEGEKKQ-ITVVGATSGDTGSA  167 (514)
T ss_dssp             TTSSCEECCTTCSS-----SCEEEEECCCSTTSBTHHHHHHHHHHHHHHHHHHHHTTSCSSSCCC-EEEEEECSSSHHHH
T ss_pred             CCCCceeehhcccc-----cchhhhhhccCCCCcHHHHHHHHHHHHHHHHHHhcCCccccccCCC-CEEEECCCCcHHHH
Confidence            56799999  7655     47999999999999999999999844   442 3452     3333 78999999999999


Q ss_pred             HHHHH--HHCCCcEEEEeCCC-CCHHHHHHHH---HcCCEEEEeCCCCChHHHHHHHHHHHHhCC-----CeEEcCCCCC
Q 028618           85 LAFMA--AAKQYRLIITMPAS-MSLERRIILR---AFGAELVLTDPAKGMKGAVQKAEEILAKTP-----NAYMLQQFEN  153 (206)
Q Consensus        85 lA~~a--~~~g~~~~ivvp~~-~~~~~~~~~~---~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~-----~~~~~~~~~~  153 (206)
                       |++|  ++.|++|+||+|++ +++.++.+|.   .+|++++.++++  ++++.+.+++++++.+     +.++.|+. |
T Consensus       168 -A~~a~a~~~Gi~~~I~~P~~~~S~~q~~qm~~~~g~~~~vv~v~g~--fdda~~~vk~l~~~~~~~~~~~~~~~Ns~-N  243 (514)
T 1kl7_A          168 -AIYGLRGKKDVSVFILYPTGRISPIQEEQMTTVPDENVQTLSVTGT--FDNCQDIVKAIFGDKEFNSKHNVGAVNSI-N  243 (514)
T ss_dssp             -HHHHHTTCTTEEEEEEEETTSSCHHHHHHHHHCCCTTEEEEEESSC--HHHHHHHHHHHHHCSSCC--CCBCCCCSC-C
T ss_pred             -HHHHHHhhcCCeEEEEEcCCCCCHHHHHHHhhhcCCCEEEEEcCCC--HHHHHHHHHHHHhcccccccceeEeeCCC-C
Confidence             5556  88999999999997 8987777773   455677777776  8999999999988753     23333332 4


Q ss_pred             CccHHHHHHhHHHHHHhhh-CC---CCCEEEEccCcchHHHHHHHHHHhcCCCCeEC
Q 028618          154 PANPKIHYETTGPELWKGS-GG---RIDALVSGIGTGGTITGAGKFLKEKNPNIKVR  206 (206)
Q Consensus       154 ~~~~~~g~~t~~~Ei~~q~-~~---~~d~vv~~vG~Gg~~aGi~~~~k~~~p~~~vi  206 (206)
                      +.. +.|+.+.+.|+++|+ ++   .+|+||+|+|+||++.|++.+.+.-.|..|+|
T Consensus       244 ~~r-i~gQ~tyy~e~~~ql~~~~~~~~d~~vvP~GngG~i~a~~~ak~~G~p~~rli  299 (514)
T 1kl7_A          244 WAR-ILAQMTYYFYSFFQATNGKDSKKVKFVVPSGNFGDILAGYFAKKMGLPIEKLA  299 (514)
T ss_dssp             HHH-HHHHHHHHHHHHHHHHSSSSCCCEEEEEECSSSHHHHHHHHHHHHTCCCCCEE
T ss_pred             HhH-HhhHHHHHHHHHHHHhhhcCCCCcEEEEECCchHHHHHHHHHHHcCCCCCEEE
Confidence            444 469999999999998 43   58999999999999999887555545766764

>3v7n_A Threonine synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, lyase; 1.40A {Burkholderia thailandensis}

Probab=99.97  E-value=1.3e-30  Score=229.31  Aligned_cols=177  Identities=14%  Similarity=0.054  Sum_probs=144.5

Q ss_pred             CcceecccccCCCCceEEEEeCCCCCCCChhhHHHHHH---HHHHH-HcCCCCCCCeEEEeeCCCchHHHHHHHHH-HCC
Q 028618           19 TPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSM---ISDAE-AKGLITPGESVLIEPTSGNTGIGLAFMAA-AKQ   93 (206)
Q Consensus        19 TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~---~~~a~-~~g~~~~~~~~vv~aSsGN~g~alA~~a~-~~g   93 (206)
                      |||+++..-   -+.++|+|.|++|||||||||++.++   +..+. ++|.    +.+|+++||||||.|+|++++ ..|
T Consensus       103 ~Pl~~l~~~---~~~~l~vkee~~~PTgSFKDRga~~~~~ll~~a~~~~g~----~~~Vv~ASSGNtG~Aaa~a~~~~~G  175 (487)
T 3v7n_A          103 TPLTTLGTE---NGAPVSLLELSNGPTLAFKDMAMQLLGNLFEYTLAKHGE----TLNILGATSGDTGSAAEYAMRGKEG  175 (487)
T ss_dssp             SCEEEEEEE---TTEEEEEEECCCSTTSBTHHHHHHHHHHHHHHHHHTTTC----CEEEEEECSSHHHHHHHHHHTTCTT
T ss_pred             ceeEEecCC---CCcceeHHhhccCCcCcHHHHHHHHHHHHHHHHHHhcCC----CcEEEEeCChHHHHHHHHHHHhccC
Confidence            788887420   01239999999999999999999998   77775 4554    257999999999999888886 899


Q ss_pred             CcEEEEeCCC-CCHHHHHHHHHcCC---EEEEeCCCCChHHHHHHHHHHHHh-----CCCeEEcCCCCCCccHHHHHHhH
Q 028618           94 YRLIITMPAS-MSLERRIILRAFGA---ELVLTDPAKGMKGAVQKAEEILAK-----TPNAYMLQQFENPANPKIHYETT  164 (206)
Q Consensus        94 ~~~~ivvp~~-~~~~~~~~~~~~Ga---~v~~~~~~~~~~~~~~~a~~~~~~-----~~~~~~~~~~~~~~~~~~g~~t~  164 (206)
                      ++|+||+|++ +++.|+++|+.+|+   +++.++++  ++++.+.+++++++     ..++.++|++ |+.. +.|+.+.
T Consensus       176 i~~~I~~P~~~~s~~k~~qm~~~Ga~nv~vv~v~G~--fDda~~~vk~~~~d~~~~~~~~l~~vns~-Np~r-i~gQ~ty  251 (487)
T 3v7n_A          176 VRVFMLSPHKKMSAFQTAQMYSLQDPNIFNLAVNGV--FDDCQDIVKAVSNDHAFKAQQKIGTVNSI-NWAR-VVAQVVY  251 (487)
T ss_dssp             EEEEEEEETTCSCHHHHHHHHTCCCTTEEEEEEESC--HHHHHHHHHHHHTCHHHHHHTTEECCSTT-CHHH-HHHHHHH
T ss_pred             CeEEEEECCCCCCHHHHHHHHhcCCCcEEEEEECCC--HHHHHHHHHHhhhchHHHhhcCeeeeCCC-CHHH-HHhHHHH
Confidence            9999999998 99999999999998   78888887  88999999888763     1256777774 6776 6799988


Q ss_pred             HHHHHhhhC---CCCCEEEEccCcchHHHHHHHHHHhcCCCCeEC
Q 028618          165 GPELWKGSG---GRIDALVSGIGTGGTITGAGKFLKEKNPNIKVR  206 (206)
Q Consensus       165 ~~Ei~~q~~---~~~d~vv~~vG~Gg~~aGi~~~~k~~~p~~~vi  206 (206)
                      +.|+..|+.   +.+|+|++|+|+||+++|++.+.+.-.|..|+|
T Consensus       252 y~~~~~el~~~~~~~d~vvVP~GngG~i~g~~~A~~mGlp~~rli  296 (487)
T 3v7n_A          252 YFKGYFAATRSNDERVSFTVPSGNFGNVCAGHIARMMGLPIEKLV  296 (487)
T ss_dssp             HHHHHHHTCSSTTCCEEEEEGGGCHHHHHHHHHHHHTTCCEEEEE
T ss_pred             HHHHHHHHHhcCCCCcEEEEecCchHHHHHHHHHHHcCCCCceEE
Confidence            888888873   359999999999999999998866555755664

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=95.98  E-value=0.11  Score=37.21  Aligned_cols=51  Identities=25%  Similarity=0.161  Sum_probs=41.0

Q ss_pred             EEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCC
Q 028618           72 VLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPA  125 (206)
Q Consensus        72 ~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~  125 (206)
                      .++....|..|..+|...+..|.+++++-.   .+.+.+.++..|..++.-+..
T Consensus         9 ~viIiG~G~~G~~la~~L~~~g~~v~vid~---~~~~~~~~~~~g~~~i~gd~~   59 (140)
T 3fwz_A            9 HALLVGYGRVGSLLGEKLLASDIPLVVIET---SRTRVDELRERGVRAVLGNAA   59 (140)
T ss_dssp             CEEEECCSHHHHHHHHHHHHTTCCEEEEES---CHHHHHHHHHTTCEEEESCTT
T ss_pred             CEEEECcCHHHHHHHHHHHHCCCCEEEEEC---CHHHHHHHHHcCCCEEECCCC
Confidence            466677899999999999999999998854   456777788889988765554

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=94.22  E-value=0.67  Score=38.03  Aligned_cols=63  Identities=21%  Similarity=0.161  Sum_probs=47.8

Q ss_pred             HHHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCC
Q 028618           59 DAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPA  125 (206)
Q Consensus        59 ~a~~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~  125 (206)
                      .+.+...+++|++.+|.+ +|..|.+.+..|+.+|.+++++.+   ++.+++.++.+|++.++-..+
T Consensus       157 ~~l~~~~~~~g~~VlV~G-aG~vG~~a~qla~~~Ga~Vi~~~~---~~~~~~~~~~lGa~~~i~~~~  219 (340)
T 3s2e_A          157 KGLKVTDTRPGQWVVISG-IGGLGHVAVQYARAMGLRVAAVDI---DDAKLNLARRLGAEVAVNARD  219 (340)
T ss_dssp             HHHHTTTCCTTSEEEEEC-CSTTHHHHHHHHHHTTCEEEEEES---CHHHHHHHHHTTCSEEEETTT
T ss_pred             HHHHHcCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCeEEEEeC---CHHHHHHHHHcCCCEEEeCCC
Confidence            345566678887776655 588999999999999997766633   567888999999987665444

>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2

Probab=94.19  E-value=0.46  Score=36.39  Aligned_cols=77  Identities=18%  Similarity=0.261  Sum_probs=58.9

Q ss_pred             CCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEe-------CC--CCCHHHHHHHH
Q 028618           43 EPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITM-------PA--SMSLERRIILR  113 (206)
Q Consensus        43 ~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivv-------p~--~~~~~~~~~~~  113 (206)
                      +|+--+-+......+.+|.+.|.    +..||.+|+|.++..++-..  -|+++++|-       |.  ..++..++.++
T Consensus        22 ~~G~eNT~~tl~la~era~e~~I----k~iVVAS~sG~TA~k~~e~~--~~i~lVvVTh~~GF~~pg~~e~~~e~~~~L~   95 (201)
T 1vp8_A           22 KPGRENTEETLRLAVERAKELGI----KHLVVASSYGDTAMKALEMA--EGLEVVVVTYHTGFVREGENTMPPEVEEELR   95 (201)
T ss_dssp             SCSGGGHHHHHHHHHHHHHHHTC----CEEEEECSSSHHHHHHHHHC--TTCEEEEEECCTTSSSTTCCSSCHHHHHHHH
T ss_pred             CCCcccHHHHHHHHHHHHHHcCC----CEEEEEeCCChHHHHHHHHh--cCCeEEEEeCcCCCCCCCCCcCCHHHHHHHH
Confidence            45556778888888899999885    25566667799887766644  688988887       43  35889999999


Q ss_pred             HcCCEEEEeCCC
Q 028618          114 AFGAELVLTDPA  125 (206)
Q Consensus       114 ~~Ga~v~~~~~~  125 (206)
                      ..|.+|+.-...
T Consensus        96 ~~G~~V~t~tH~  107 (201)
T 1vp8_A           96 KRGAKIVRQSHI  107 (201)
T ss_dssp             HTTCEEEECCCT
T ss_pred             hCCCEEEEEecc
Confidence            999999987654

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=94.02  E-value=0.42  Score=39.04  Aligned_cols=61  Identities=26%  Similarity=0.258  Sum_probs=48.1

Q ss_pred             HcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCC
Q 028618           62 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPA  125 (206)
Q Consensus        62 ~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~  125 (206)
                      +...+++|++.+|.+.+|..|++++..++..|.+++++..   ++.+++.++.+|++.+....+
T Consensus       134 ~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~---~~~~~~~~~~~Ga~~~~~~~~  194 (325)
T 3jyn_A          134 QTYQVKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVS---SPEKAAHAKALGAWETIDYSH  194 (325)
T ss_dssp             TTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEES---SHHHHHHHHHHTCSEEEETTT
T ss_pred             HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHcCCCEEEeCCC
Confidence            4566788877777777899999999999999998776654   567888888999976655443

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=94.00  E-value=0.58  Score=38.30  Aligned_cols=61  Identities=21%  Similarity=0.303  Sum_probs=48.0

Q ss_pred             HcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCC
Q 028618           62 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPA  125 (206)
Q Consensus        62 ~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~  125 (206)
                      +.+.+++|++.+|.+.+|..|.+++..++..|.+++++.+   ++.+++.++.+|++.+....+
T Consensus       142 ~~~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~---~~~~~~~~~~~ga~~~~~~~~  202 (334)
T 3qwb_A          142 EAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVAS---TDEKLKIAKEYGAEYLINASK  202 (334)
T ss_dssp             TTSCCCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHTTCSEEEETTT
T ss_pred             HhccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHcCCcEEEeCCC
Confidence            4456788877777777899999999999999998776654   467788889999987665443

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=93.62  E-value=0.8  Score=37.47  Aligned_cols=61  Identities=21%  Similarity=0.233  Sum_probs=47.9

Q ss_pred             HcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHH-HHcCCEEEEeCCC
Q 028618           62 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIIL-RAFGAELVLTDPA  125 (206)
Q Consensus        62 ~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~-~~~Ga~v~~~~~~  125 (206)
                      +...+++|++.+|.+.+|..|.+++..++..|.+++++..   ++.+++.+ +.+|++.+....+
T Consensus       143 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~---~~~~~~~~~~~~g~~~~~~~~~  204 (336)
T 4b7c_A          143 DVGQPKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAG---GAEKCRFLVEELGFDGAIDYKN  204 (336)
T ss_dssp             HTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHTTCCSEEEETTT
T ss_pred             HhcCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHHcCCCEEEECCC
Confidence            6667888888888888899999999999999998776643   45677777 8999976654433

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=93.41  E-value=0.76  Score=38.03  Aligned_cols=61  Identities=23%  Similarity=0.150  Sum_probs=48.1

Q ss_pred             HcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCC
Q 028618           62 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPA  125 (206)
Q Consensus        62 ~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~  125 (206)
                      +...+++|++.+|.+.+|..|.+++..++..|.+++++..   ++.+++.++.+|++.+....+
T Consensus       161 ~~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~---~~~~~~~~~~lGa~~~~~~~~  221 (353)
T 4dup_A          161 QMAGLTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAG---STGKCEACERLGAKRGINYRS  221 (353)
T ss_dssp             TTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHHTCSEEEETTT
T ss_pred             HhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHhcCCCEEEeCCc
Confidence            5567788877777778899999999999999998666643   457788888999987655443

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=93.25  E-value=0.97  Score=37.54  Aligned_cols=60  Identities=22%  Similarity=0.314  Sum_probs=46.3

Q ss_pred             HcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCC
Q 028618           62 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDP  124 (206)
Q Consensus        62 ~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~  124 (206)
                      +.+.+++|++.+|.+.+|..|.+++..|+..|.+++++.+   ++.+++.++.+|++.+....
T Consensus       157 ~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~---~~~~~~~~~~~Ga~~~~~~~  216 (362)
T 2c0c_A          157 ELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCS---SDEKSAFLKSLGCDRPINYK  216 (362)
T ss_dssp             HHTCCCTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHTTCSEEEETT
T ss_pred             HhcCCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEEC---CHHHHHHHHHcCCcEEEecC
Confidence            4456778877777777899999999999999998666654   35778888889998665433

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=93.17  E-value=0.91  Score=37.71  Aligned_cols=57  Identities=25%  Similarity=0.288  Sum_probs=45.8

Q ss_pred             HcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEe
Q 028618           62 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLT  122 (206)
Q Consensus        62 ~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~  122 (206)
                      +...+++|++.+|.+ +|..|.+.+..|+.+|.+++++.+   ++.+++.++.+|++.++.
T Consensus       183 ~~~~~~~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~---~~~~~~~~~~lGa~~vi~  239 (363)
T 3uog_A          183 EKGHLRAGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSS---SREKLDRAFALGADHGIN  239 (363)
T ss_dssp             TTTCCCTTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEES---CHHHHHHHHHHTCSEEEE
T ss_pred             HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEec---CchhHHHHHHcCCCEEEc
Confidence            566788887777766 899999999999999998776643   567888889999986665

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=92.87  E-value=1.9  Score=31.72  Aligned_cols=51  Identities=16%  Similarity=0.023  Sum_probs=39.1

Q ss_pred             EEEeeCCCchHHHHHHHHHHC-CCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCC
Q 028618           72 VLIEPTSGNTGIGLAFMAAAK-QYRLIITMPASMSLERRIILRAFGAELVLTDPA  125 (206)
Q Consensus        72 ~vv~aSsGN~g~alA~~a~~~-g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~  125 (206)
                      .++....|..|..+|...+.. |.+++++-.   .+.+.+.++..|.+++..+..
T Consensus        41 ~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~---~~~~~~~~~~~g~~~~~gd~~   92 (183)
T 3c85_A           41 QVLILGMGRIGTGAYDELRARYGKISLGIEI---REEAAQQHRSEGRNVISGDAT   92 (183)
T ss_dssp             SEEEECCSHHHHHHHHHHHHHHCSCEEEEES---CHHHHHHHHHTTCCEEECCTT
T ss_pred             cEEEECCCHHHHHHHHHHHhccCCeEEEEEC---CHHHHHHHHHCCCCEEEcCCC
Confidence            345556899999999999988 999888844   456777778889887765543

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=92.86  E-value=1.9  Score=34.30  Aligned_cols=57  Identities=19%  Similarity=0.092  Sum_probs=32.5

Q ss_pred             CCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCC-CHHHHHHHHHcCCEEEEeCCC
Q 028618           69 GESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASM-SLERRIILRAFGAELVLTDPA  125 (206)
Q Consensus        69 ~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~-~~~~~~~~~~~Ga~v~~~~~~  125 (206)
                      |+..+||..++--|+++|......|.++++.-.... -....+.++..|.+++.+..|
T Consensus         9 gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~D   66 (255)
T 4g81_D            9 GKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFD   66 (255)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEee
Confidence            347788888888888888887777766544322110 112233444555555555433

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=92.82  E-value=0.86  Score=37.10  Aligned_cols=61  Identities=28%  Similarity=0.335  Sum_probs=46.8

Q ss_pred             HHHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeC
Q 028618           59 DAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTD  123 (206)
Q Consensus        59 ~a~~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~  123 (206)
                      .+.+...+++|++.+|.+.+|..|++.+..|+.+|.+++++.    +..+++.++.+|++.+.-.
T Consensus       143 ~al~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~----~~~~~~~~~~lGa~~~i~~  203 (321)
T 3tqh_A          143 QALNQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTA----SKRNHAFLKALGAEQCINY  203 (321)
T ss_dssp             HHHHHTTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE----CHHHHHHHHHHTCSEEEET
T ss_pred             HHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEe----ccchHHHHHHcCCCEEEeC
Confidence            344667788887766666789999999999999999876664    3456888899999865543

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=92.70  E-value=1  Score=37.10  Aligned_cols=54  Identities=24%  Similarity=0.288  Sum_probs=44.7

Q ss_pred             HcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEE
Q 028618           62 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAEL  119 (206)
Q Consensus        62 ~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v  119 (206)
                      +...+++|++.+|.+.+|..|++++..|+..|.+++++    .++.+++.++.+|++.
T Consensus       144 ~~~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~----~~~~~~~~~~~lGa~~  197 (343)
T 3gaz_A          144 DRAQVQDGQTVLIQGGGGGVGHVAIQIALARGARVFAT----ARGSDLEYVRDLGATP  197 (343)
T ss_dssp             TTTCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE----ECHHHHHHHHHHTSEE
T ss_pred             HhcCCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE----eCHHHHHHHHHcCCCE
Confidence            66778888777777778999999999999999986665    3467788889999998

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=92.64  E-value=0.69  Score=38.10  Aligned_cols=59  Identities=22%  Similarity=0.374  Sum_probs=46.3

Q ss_pred             HcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeC
Q 028618           62 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTD  123 (206)
Q Consensus        62 ~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~  123 (206)
                      +...+++|++.+|.+.+|..|.+++..|+..|.+++++...   +.+++.++.+|++.+...
T Consensus       153 ~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~---~~~~~~~~~~ga~~v~~~  211 (342)
T 4eye_A          153 RRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNR---TAATEFVKSVGADIVLPL  211 (342)
T ss_dssp             TTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESS---GGGHHHHHHHTCSEEEES
T ss_pred             HhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCC---HHHHHHHHhcCCcEEecC
Confidence            56677888787887788999999999999999987777653   345677778898866543

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=92.48  E-value=0.48  Score=39.56  Aligned_cols=53  Identities=25%  Similarity=0.080  Sum_probs=42.3

Q ss_pred             CCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeC
Q 028618           67 TPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTD  123 (206)
Q Consensus        67 ~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~  123 (206)
                      .+|++.+|.+.+|..|.+.+..|+.+|.+++++.    ++.|++.++.+|++.++..
T Consensus       163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~----~~~~~~~~~~lGa~~vi~~  215 (371)
T 3gqv_A          163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC----SPHNFDLAKSRGAEEVFDY  215 (371)
T ss_dssp             SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE----CGGGHHHHHHTTCSEEEET
T ss_pred             CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe----CHHHHHHHHHcCCcEEEEC
Confidence            6676777777779999999999999999877664    3567888899999866544

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=92.25  E-value=0.74  Score=37.83  Aligned_cols=62  Identities=16%  Similarity=0.223  Sum_probs=46.8

Q ss_pred             HHcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCC
Q 028618           61 EAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPA  125 (206)
Q Consensus        61 ~~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~  125 (206)
                      .+...+++|++.+|.+.+|..|.+++..|+..|.+++++....   .+++.++.+|++.++...+
T Consensus       137 ~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~---~~~~~~~~lga~~~~~~~~  198 (340)
T 3gms_A          137 TETLNLQRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNN---KHTEELLRLGAAYVIDTST  198 (340)
T ss_dssp             HTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSS---TTHHHHHHHTCSEEEETTT
T ss_pred             HHhcccCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCH---HHHHHHHhCCCcEEEeCCc
Confidence            3566788888888877888999999999999999877776543   3456667789986654433

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=92.23  E-value=1.5  Score=37.35  Aligned_cols=51  Identities=16%  Similarity=0.212  Sum_probs=41.3

Q ss_pred             EEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCC
Q 028618           72 VLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPA  125 (206)
Q Consensus        72 ~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~  125 (206)
                      .++....|..|..+|...+..|++++++   +..+.+++.++..|..++.-+..
T Consensus         6 ~viIiG~Gr~G~~va~~L~~~g~~vvvI---d~d~~~v~~~~~~g~~vi~GDat   56 (413)
T 3l9w_A            6 RVIIAGFGRFGQITGRLLLSSGVKMVVL---DHDPDHIETLRKFGMKVFYGDAT   56 (413)
T ss_dssp             SEEEECCSHHHHHHHHHHHHTTCCEEEE---ECCHHHHHHHHHTTCCCEESCTT
T ss_pred             eEEEECCCHHHHHHHHHHHHCCCCEEEE---ECCHHHHHHHHhCCCeEEEcCCC
Confidence            4667778999999999999999998888   44567788888888887766654

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=92.10  E-value=1.7  Score=35.66  Aligned_cols=59  Identities=20%  Similarity=0.231  Sum_probs=45.5

Q ss_pred             HHHc-CCCCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEE
Q 028618           60 AEAK-GLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVL  121 (206)
Q Consensus        60 a~~~-g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~  121 (206)
                      +..+ ..++++++.+|...+|..|++++..++..|.+++++..   ++.+++.++.+|++.+.
T Consensus       157 al~~~~~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~---~~~~~~~~~~~ga~~~~  216 (343)
T 2eih_A          157 MVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAG---SEDKLRRAKALGADETV  216 (343)
T ss_dssp             HHTTTSCCCTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHHTCSEEE
T ss_pred             HHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHhcCCCEEE
Confidence            4444 46778878888888899999999999999998766644   35677777888987554

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=92.08  E-value=1  Score=37.14  Aligned_cols=59  Identities=17%  Similarity=0.120  Sum_probs=44.9

Q ss_pred             HHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCC-cEEEEeCCCCCHHHHHHHHHcCCEEEEe
Q 028618           60 AEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQY-RLIITMPASMSLERRIILRAFGAELVLT  122 (206)
Q Consensus        60 a~~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~-~~~ivvp~~~~~~~~~~~~~~Ga~v~~~  122 (206)
                      +.+...+++|++.+|.+ +|..|.+.+..|+..|. +++++   +.++.+++.++.+|++.++-
T Consensus       158 al~~~~~~~g~~VlV~G-aG~vG~~a~qla~~~Ga~~Vi~~---~~~~~~~~~~~~lGa~~vi~  217 (352)
T 3fpc_A          158 GAELANIKLGDTVCVIG-IGPVGLMSVAGANHLGAGRIFAV---GSRKHCCDIALEYGATDIIN  217 (352)
T ss_dssp             HHHHTTCCTTCCEEEEC-CSHHHHHHHHHHHTTTCSSEEEE---CCCHHHHHHHHHHTCCEEEC
T ss_pred             HHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEE---CCCHHHHHHHHHhCCceEEc
Confidence            44566678887776765 69999999999999998 56554   34567888899999976554

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=92.04  E-value=1.7  Score=36.50  Aligned_cols=59  Identities=20%  Similarity=0.247  Sum_probs=43.2

Q ss_pred             HHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEE
Q 028618           60 AEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVL  121 (206)
Q Consensus        60 a~~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~  121 (206)
                      +.+...+++|++.+|.+ +|.-|+..+..|+.+|.+.++.+  ..++.+++.++.+|++++.
T Consensus       177 al~~~~~~~g~~VlV~G-aG~vG~~aiqlAk~~Ga~~Vi~~--~~~~~~~~~a~~lGa~~i~  235 (398)
T 1kol_A          177 GAVTAGVGPGSTVYVAG-AGPVGLAAAASARLLGAAVVIVG--DLNPARLAHAKAQGFEIAD  235 (398)
T ss_dssp             HHHHTTCCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEE--ESCHHHHHHHHHTTCEEEE
T ss_pred             HHHHcCCCCCCEEEEEC-CcHHHHHHHHHHHHCCCCeEEEE--cCCHHHHHHHHHcCCcEEc
Confidence            34455678887666655 69999999999999998544433  2356788889999998543

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=91.96  E-value=1.7  Score=35.50  Aligned_cols=64  Identities=19%  Similarity=0.188  Sum_probs=48.1

Q ss_pred             HHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCC
Q 028618           60 AEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAK  126 (206)
Q Consensus        60 a~~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~  126 (206)
                      +.......+|++.+|. .+|.-|...+..|+.+|.+.++.+.  .++.|++.++.+||+.+....+.
T Consensus       152 ~~~~~~~~~g~~VlV~-GaG~vG~~aiq~ak~~G~~~vi~~~--~~~~k~~~a~~lGa~~~i~~~~~  215 (346)
T 4a2c_A          152 AFHLAQGCENKNVIII-GAGTIGLLAIQCAVALGAKSVTAID--ISSEKLALAKSFGAMQTFNSSEM  215 (346)
T ss_dssp             HHHHTTCCTTSEEEEE-CCSHHHHHHHHHHHHTTCSEEEEEE--SCHHHHHHHHHTTCSEEEETTTS
T ss_pred             HHHHhccCCCCEEEEE-CCCCcchHHHHHHHHcCCcEEEEEe--chHHHHHHHHHcCCeEEEeCCCC
Confidence            4455567787665555 5588999999999999999877753  35678899999999877665543

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=91.94  E-value=2.2  Score=35.46  Aligned_cols=61  Identities=18%  Similarity=0.163  Sum_probs=44.5

Q ss_pred             HHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeC
Q 028618           60 AEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTD  123 (206)
Q Consensus        60 a~~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~  123 (206)
                      +.+...+++|++.+|.+ +|..|.+.+..|+.+|.+.++.+  ..++.+++.++.+|++.+...
T Consensus       174 ~l~~~~~~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~--~~~~~~~~~a~~lGa~~vi~~  234 (370)
T 4ej6_A          174 GVDLSGIKAGSTVAILG-GGVIGLLTVQLARLAGATTVILS--TRQATKRRLAEEVGATATVDP  234 (370)
T ss_dssp             HHHHHTCCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEE--CSCHHHHHHHHHHTCSEEECT
T ss_pred             HHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEE--CCCHHHHHHHHHcCCCEEECC
Confidence            34555677887766665 58999999999999999544443  335678888899999866543

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=91.88  E-value=0.98  Score=37.80  Aligned_cols=65  Identities=22%  Similarity=0.291  Sum_probs=46.4

Q ss_pred             HHHHHHHHHHcCCCCCCCeEEEee-CCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCC
Q 028618           53 GYSMISDAEAKGLITPGESVLIEP-TSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPA  125 (206)
Q Consensus        53 a~~~~~~a~~~g~~~~~~~~vv~a-SsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~  125 (206)
                      ++.++..+.+.     |++.+|.. .+|..|.+.+..|+.+|.+++++..   ++.|++.++.+|++.++...+
T Consensus       160 a~~~~~~~~~~-----g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~---~~~~~~~~~~lGa~~~~~~~~  225 (379)
T 3iup_A          160 ALGMVETMRLE-----GHSALVHTAAASNLGQMLNQICLKDGIKLVNIVR---KQEQADLLKAQGAVHVCNAAS  225 (379)
T ss_dssp             HHHHHHHHHHT-----TCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEES---SHHHHHHHHHTTCSCEEETTS
T ss_pred             HHHHHHHhccC-----CCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEEC---CHHHHHHHHhCCCcEEEeCCC
Confidence            44444444433     33566653 7899999999999999998777653   568889999999986655443

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=91.74  E-value=1.7  Score=35.85  Aligned_cols=59  Identities=17%  Similarity=0.177  Sum_probs=45.6

Q ss_pred             HcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeC
Q 028618           62 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTD  123 (206)
Q Consensus        62 ~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~  123 (206)
                      +...+++|+..+|+..+|..|.+++..++..|.+++++..   ++.+++.++.+|++.+.-.
T Consensus       156 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~---~~~~~~~~~~~g~~~~~~~  214 (354)
T 2j8z_A          156 LVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAG---SQKKLQMAEKLGAAAGFNY  214 (354)
T ss_dssp             TTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES---CHHHHHHHHHHTCSEEEET
T ss_pred             HhcCCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHHcCCcEEEec
Confidence            4566788877777777899999999999999998766644   4567777788998765443

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=91.46  E-value=2.3  Score=34.56  Aligned_cols=57  Identities=21%  Similarity=0.281  Sum_probs=44.4

Q ss_pred             HcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEE
Q 028618           62 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVL  121 (206)
Q Consensus        62 ~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~  121 (206)
                      +...+++|+..+|+..+|..|.+++..++..|.+++++..   ++.+++.++.+|++.+.
T Consensus       139 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~---~~~~~~~~~~~g~~~~~  195 (333)
T 1v3u_A          139 EVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAG---SDEKIAYLKQIGFDAAF  195 (333)
T ss_dssp             TTSCCCSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHTTCSEEE
T ss_pred             HhhCCCCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHhcCCcEEE
Confidence            4556778878888888899999999999999997766643   35667777888986554

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=91.41  E-value=2.2  Score=34.79  Aligned_cols=58  Identities=22%  Similarity=0.284  Sum_probs=44.8

Q ss_pred             HcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEe
Q 028618           62 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLT  122 (206)
Q Consensus        62 ~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~  122 (206)
                      +...+++++..+|+..+|..|.+++..++..|.+++++..   ++.+.+.++.+|++.+.-
T Consensus       139 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~---~~~~~~~~~~~g~~~~~d  196 (333)
T 1wly_A          139 QTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVS---TEEKAETARKLGCHHTIN  196 (333)
T ss_dssp             TTSCCCTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHHTCSEEEE
T ss_pred             HhhCCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHcCCCEEEE
Confidence            3566788877777777899999999999999998766644   356677778889876543

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=91.39  E-value=0.95  Score=37.44  Aligned_cols=58  Identities=17%  Similarity=0.188  Sum_probs=44.6

Q ss_pred             CCCCCC-CeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCC-HHHHHHHHHcCCEEEE
Q 028618           64 GLITPG-ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVL  121 (206)
Q Consensus        64 g~~~~~-~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~-~~~~~~~~~~Ga~v~~  121 (206)
                      +.+++| ++.+|.+.+|..|+.++..|+.+|.++++++..... ..+++.++.+|++.++
T Consensus       162 ~~~~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi  221 (364)
T 1gu7_A          162 VKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVI  221 (364)
T ss_dssp             SCCCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEE
T ss_pred             hccCCCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhcCCeEEE
Confidence            467788 777777778999999999999999998888765444 3445666889987554

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=91.36  E-value=0.9  Score=37.60  Aligned_cols=60  Identities=25%  Similarity=0.309  Sum_probs=47.2

Q ss_pred             HcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCC-HHHHHHHHHcCCEEEE
Q 028618           62 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVL  121 (206)
Q Consensus        62 ~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~-~~~~~~~~~~Ga~v~~  121 (206)
                      +.+.+++|++.+|.+.+|..|++.+..|+.+|.++++++..... ..+++.++.+|++.++
T Consensus       161 ~~~~~~~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi  221 (357)
T 1zsy_A          161 DFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVI  221 (357)
T ss_dssp             HSSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHTTCSEEE
T ss_pred             HHhccCCCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhcCCcEEE
Confidence            44667888777777777999999999999999998888765543 4567788899997554

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=91.28  E-value=2.6  Score=34.72  Aligned_cols=58  Identities=28%  Similarity=0.352  Sum_probs=45.5

Q ss_pred             HcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEe
Q 028618           62 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLT  122 (206)
Q Consensus        62 ~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~  122 (206)
                      +...+++++..+|.+.+|..|.+++..++..|.+++++..   ++.+++.++.+|++.+.-
T Consensus       164 ~~~~~~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~---~~~~~~~~~~~ga~~~~d  221 (351)
T 1yb5_A          164 HSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAG---TEEGQKIVLQNGAHEVFN  221 (351)
T ss_dssp             TTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHTTCSEEEE
T ss_pred             HhhCCCCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC---ChhHHHHHHHcCCCEEEe
Confidence            3566788878888888899999999999999998666643   356777888899876543

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=91.07  E-value=1.8  Score=34.01  Aligned_cols=34  Identities=15%  Similarity=0.205  Sum_probs=21.9

Q ss_pred             CCeEEEeeCCCc--hHHHHHHHHHHCCCcEEEEeCC
Q 028618           69 GESVLIEPTSGN--TGIGLAFMAAAKQYRLIITMPA  102 (206)
Q Consensus        69 ~~~~vv~aSsGN--~g~alA~~a~~~g~~~~ivvp~  102 (206)
                      |+..+||..+|+  -|.++|....+.|.++++.-..
T Consensus         6 gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~   41 (256)
T 4fs3_A            6 NKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRK   41 (256)
T ss_dssp             TCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECC
Confidence            346778776554  5666776667777776665443

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=90.89  E-value=2.5  Score=31.42  Aligned_cols=57  Identities=32%  Similarity=0.448  Sum_probs=43.1

Q ss_pred             HcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEE
Q 028618           62 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVL  121 (206)
Q Consensus        62 ~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~  121 (206)
                      +...+++|+..+|+..+|..|.+++..++..|.+++++..   ++.+.+.++.+|++.+.
T Consensus        32 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~---~~~~~~~~~~~g~~~~~   88 (198)
T 1pqw_A           32 EVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAG---SDAKREMLSRLGVEYVG   88 (198)
T ss_dssp             TTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEES---SHHHHHHHHTTCCSEEE
T ss_pred             HHhCCCCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHHcCCCEEe
Confidence            3456778877777777899999999999999988766643   35666677888987554

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=90.89  E-value=2.3  Score=35.12  Aligned_cols=57  Identities=19%  Similarity=0.167  Sum_probs=43.0

Q ss_pred             CCCCCCCeEEEeeCCCchHHHHHHHHHHC-CCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCC
Q 028618           64 GLITPGESVLIEPTSGNTGIGLAFMAAAK-QYRLIITMPASMSLERRIILRAFGAELVLTDP  124 (206)
Q Consensus        64 g~~~~~~~~vv~aSsGN~g~alA~~a~~~-g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~  124 (206)
                      ..+++|++.+|... |..|+..+..|+.+ |.+++++.+   ++.+++.++.+|++.++-..
T Consensus       182 ~~~~~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~---~~~~~~~~~~lGa~~vi~~~  239 (359)
T 1h2b_A          182 RTLYPGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDV---KEEKLKLAERLGADHVVDAR  239 (359)
T ss_dssp             TTCCTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEES---SHHHHHHHHHTTCSEEEETT
T ss_pred             cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeC---CHHHHHHHHHhCCCEEEecc
Confidence            56778876666665 88999999999999 997655543   46788888999997655433

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=90.75  E-value=0.7  Score=39.76  Aligned_cols=58  Identities=29%  Similarity=0.303  Sum_probs=47.6

Q ss_pred             CCCCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCC
Q 028618           64 GLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDP  124 (206)
Q Consensus        64 g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~  124 (206)
                      ..+++|++.+|.+.+|..|.+.+..|+.+|.+++++..   ++.+++.++.+|++.+....
T Consensus       224 ~~~~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~---~~~~~~~~~~lGa~~vi~~~  281 (456)
T 3krt_A          224 AGMKQGDNVLIWGASGGLGSYATQFALAGGANPICVVS---SPQKAEICRAMGAEAIIDRN  281 (456)
T ss_dssp             TCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHHTCCEEEETT
T ss_pred             cCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEEC---CHHHHHHHHhhCCcEEEecC
Confidence            46788877777777799999999999999998887763   67889999999998766543

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=90.74  E-value=2.2  Score=34.95  Aligned_cols=61  Identities=21%  Similarity=0.193  Sum_probs=45.4

Q ss_pred             HHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHC-CCcEEEEeCCCCCHHHHHHHHHcCCEEEEeC
Q 028618           60 AEAKGLITPGESVLIEPTSGNTGIGLAFMAAAK-QYRLIITMPASMSLERRIILRAFGAELVLTD  123 (206)
Q Consensus        60 a~~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~-g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~  123 (206)
                      +.++..+++++..+|+..+|..|++++..++.. |.+++++..   ++.+++.++.+|++.+...
T Consensus       162 ~l~~~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~---~~~~~~~~~~~g~~~~~~~  223 (347)
T 1jvb_A          162 AVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDV---REEAVEAAKRAGADYVINA  223 (347)
T ss_dssp             HHHHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEES---SHHHHHHHHHHTCSEEEET
T ss_pred             HHHhcCCCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcC---CHHHHHHHHHhCCCEEecC
Confidence            334456778878888887779999999999998 998666543   3567777788998765543

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=90.73  E-value=1.1  Score=36.85  Aligned_cols=67  Identities=19%  Similarity=0.266  Sum_probs=46.1

Q ss_pred             HHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCC
Q 028618           52 IGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPA  125 (206)
Q Consensus        52 ~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~  125 (206)
                      .++.++..+...|.    +..+|.+.+|..|++++..|+.+|.+++++.+.   +.+++.++.+|++.+....+
T Consensus       152 ta~~~~~~~~~~g~----~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~---~~~~~~~~~~Ga~~~~~~~~  218 (349)
T 3pi7_A          152 TAIAMFDIVKQEGE----KAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRR---DEQIALLKDIGAAHVLNEKA  218 (349)
T ss_dssp             HHHHHHHHHHHHCC----SEEEESSTTSHHHHHHHHHHHHHTCEEEEEESC---GGGHHHHHHHTCSEEEETTS
T ss_pred             HHHHHHHHHhhCCC----CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHcCCCEEEECCc
Confidence            34444444443331    356666788999999999999999987777543   35677778899986655443

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=90.68  E-value=2.3  Score=34.54  Aligned_cols=57  Identities=25%  Similarity=0.212  Sum_probs=44.6

Q ss_pred             cCCCCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEe
Q 028618           63 KGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLT  122 (206)
Q Consensus        63 ~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~  122 (206)
                      ...+++++..+|+..+|..|.+++..++..|.+++++..   ++.+.+.++.+|++.+.-
T Consensus       135 ~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~---~~~~~~~~~~~g~~~~~~  191 (327)
T 1qor_A          135 TYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVG---TAQKAQSALKAGAWQVIN  191 (327)
T ss_dssp             TSCCCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEES---SHHHHHHHHHHTCSEEEE
T ss_pred             hhCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHHcCCCEEEE
Confidence            566788878888877899999999999999997766644   356777777889876543

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=90.55  E-value=2.4  Score=34.75  Aligned_cols=53  Identities=28%  Similarity=0.339  Sum_probs=41.9

Q ss_pred             CCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeC
Q 028618           68 PGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTD  123 (206)
Q Consensus        68 ~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~  123 (206)
                      +|++.+|.+.+|..|.+++..|+.+|.+++++.+   ++.+++.++.+|++.+...
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~---~~~~~~~~~~lGa~~vi~~  202 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTAS---RNETIEWTKKMGADIVLNH  202 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECC---SHHHHHHHHHHTCSEEECT
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHhcCCcEEEEC
Confidence            6767777778899999999999999997666533   4678888889999766543

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=90.47  E-value=2.7  Score=34.47  Aligned_cols=59  Identities=22%  Similarity=0.275  Sum_probs=44.1

Q ss_pred             HHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEE
Q 028618           60 AEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVL  121 (206)
Q Consensus        60 a~~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~  121 (206)
                      +.++..+++|+..+|+..+|..|.+++..++..|.+++++.+..   .+.+.++.+|++.+.
T Consensus       161 ~l~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~---~~~~~~~~~g~~~~~  219 (347)
T 2hcy_A          161 ALKSANLMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGE---GKEELFRSIGGEVFI  219 (347)
T ss_dssp             HHHTTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECST---THHHHHHHTTCCEEE
T ss_pred             HHHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCH---HHHHHHHHcCCceEE
Confidence            44444577887888888889999999999999999877765432   345667788987554

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=90.36  E-value=4.9  Score=31.71  Aligned_cols=30  Identities=23%  Similarity=0.270  Sum_probs=22.6

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHCCCcEEEE
Q 028618           70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIIT   99 (206)
Q Consensus        70 ~~~vv~aSsGN~g~alA~~a~~~g~~~~iv   99 (206)
                      +..+|+..+|--|.++|......|.++++.
T Consensus        27 k~~lVTGas~gIG~aia~~la~~G~~V~~~   56 (271)
T 4ibo_A           27 RTALVTGSSRGLGRAMAEGLAVAGARILIN   56 (271)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEE
Confidence            367888888888888888777777765544

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=90.22  E-value=3.5  Score=33.91  Aligned_cols=58  Identities=21%  Similarity=0.344  Sum_probs=44.6

Q ss_pred             HcCCCCCC--CeEEEeeCCCchHHHHHHHHHHCCC-cEEEEeCCCCCHHHHHHHHH-cCCEEEEe
Q 028618           62 AKGLITPG--ESVLIEPTSGNTGIGLAFMAAAKQY-RLIITMPASMSLERRIILRA-FGAELVLT  122 (206)
Q Consensus        62 ~~g~~~~~--~~~vv~aSsGN~g~alA~~a~~~g~-~~~ivvp~~~~~~~~~~~~~-~Ga~v~~~  122 (206)
                      +.+.+++|  +..+|+..+|..|++++..++..|. +++++..   ++.+++.++. +|++.+.-
T Consensus       152 ~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~---~~~~~~~~~~~~g~~~~~d  213 (357)
T 2zb4_A          152 EKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICG---THEKCILLTSELGFDAAIN  213 (357)
T ss_dssp             HHSCCCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEES---CHHHHHHHHHTSCCSEEEE
T ss_pred             HhcCCCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeC---CHHHHHHHHHHcCCceEEe
Confidence            55667777  7888888889999999999999999 7766654   3466777766 89875543

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=90.08  E-value=0.47  Score=38.51  Aligned_cols=58  Identities=19%  Similarity=0.087  Sum_probs=44.7

Q ss_pred             HHHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEE
Q 028618           59 DAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVL  121 (206)
Q Consensus        59 ~a~~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~  121 (206)
                      .+.+...+++|++.+|.+. |..|++.+..|+.+|.+++++.    ++.+++.++.+|++.+.
T Consensus       133 ~al~~~~~~~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~----~~~~~~~~~~lGa~~v~  190 (315)
T 3goh_A          133 QAFEKIPLTKQREVLIVGF-GAVNNLLTQMLNNAGYVVDLVS----ASLSQALAAKRGVRHLY  190 (315)
T ss_dssp             HHHTTSCCCSCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEC----SSCCHHHHHHHTEEEEE
T ss_pred             HHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEE----ChhhHHHHHHcCCCEEE
Confidence            3456777888877666666 9999999999999999777665    33467777889987654

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=90.05  E-value=1.7  Score=36.67  Aligned_cols=56  Identities=25%  Similarity=0.399  Sum_probs=42.6

Q ss_pred             CCCCCCeEEEeeCCCchHHHHHHHHHHCCC-cEEEEeCCCCCHHHHHHHHHcCCEEEEeCC
Q 028618           65 LITPGESVLIEPTSGNTGIGLAFMAAAKQY-RLIITMPASMSLERRIILRAFGAELVLTDP  124 (206)
Q Consensus        65 ~~~~~~~~vv~aSsGN~g~alA~~a~~~g~-~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~  124 (206)
                      .+++|++.+|.+ +|..|.+.+..|+.+|. +++++   ..++.+++.++.+|++.++-..
T Consensus       210 ~~~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~---~~~~~~~~~~~~lGa~~vi~~~  266 (404)
T 3ip1_A          210 GIRPGDNVVILG-GGPIGLAAVAILKHAGASKVILS---EPSEVRRNLAKELGADHVIDPT  266 (404)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEE---CSCHHHHHHHHHHTCSEEECTT
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEE---CCCHHHHHHHHHcCCCEEEcCC
Confidence            578887766665 59999999999999999 44443   3356888899999998765443

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=90.05  E-value=1.1  Score=38.18  Aligned_cols=56  Identities=23%  Similarity=0.294  Sum_probs=46.4

Q ss_pred             CCCCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEe
Q 028618           64 GLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLT  122 (206)
Q Consensus        64 g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~  122 (206)
                      ..+++|++.+|.+.+|..|++++..|+..|.+++++..   ++.+++.++.+|++.+..
T Consensus       216 ~~~~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~---~~~~~~~~~~lGa~~~i~  271 (447)
T 4a0s_A          216 AQMKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVS---SAQKEAAVRALGCDLVIN  271 (447)
T ss_dssp             TCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHTTCCCEEE
T ss_pred             cCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHhcCCCEEEe
Confidence            56788877777777899999999999999998877763   678888899999976543

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=90.03  E-value=2.4  Score=33.05  Aligned_cols=55  Identities=13%  Similarity=0.184  Sum_probs=41.5

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCC
Q 028618           70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPA  125 (206)
Q Consensus        70 ~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~  125 (206)
                      +..+|+..+|.-|.++|......|.+++++..... ....+.++..|.++..+..|
T Consensus         5 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~l~~~~~~~~~~~~D   59 (255)
T 2q2v_A            5 KTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP-APALAEIARHGVKAVHHPAD   59 (255)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC-HHHHHHHHTTSCCEEEECCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch-HHHHHHHHhcCCceEEEeCC
Confidence            46789999999999999999999998777654433 44456666678777777655

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=89.85  E-value=1.9  Score=36.03  Aligned_cols=59  Identities=24%  Similarity=0.249  Sum_probs=45.3

Q ss_pred             HHHcCC-CCCCCeEEEeeCCCchHHHHHHHHHHCC-CcEEEEeCCCCCHHHHHHHHHcCCEEEEe
Q 028618           60 AEAKGL-ITPGESVLIEPTSGNTGIGLAFMAAAKQ-YRLIITMPASMSLERRIILRAFGAELVLT  122 (206)
Q Consensus        60 a~~~g~-~~~~~~~vv~aSsGN~g~alA~~a~~~g-~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~  122 (206)
                      +.++.. +++|++.+|.+ +|..|++++..|+.+| .+++++.+   ++.+++.++.+|++.++-
T Consensus       186 al~~~~~~~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~---~~~~~~~~~~lGa~~vi~  246 (380)
T 1vj0_A          186 AFDEYPESFAGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAG---SPNRLKLAEEIGADLTLN  246 (380)
T ss_dssp             HHHTCSSCCBTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEES---CHHHHHHHHHTTCSEEEE
T ss_pred             HHHhcCCCCCCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcC---CHHHHHHHHHcCCcEEEe
Confidence            345556 77887777777 8999999999999999 47776654   457888889999976543

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=89.74  E-value=2.8  Score=34.37  Aligned_cols=58  Identities=33%  Similarity=0.400  Sum_probs=43.9

Q ss_pred             HHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCC-cEEEEeCCCCCHHHHHHHHHcCCEEEEe
Q 028618           60 AEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQY-RLIITMPASMSLERRIILRAFGAELVLT  122 (206)
Q Consensus        60 a~~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~-~~~ivvp~~~~~~~~~~~~~~Ga~v~~~  122 (206)
                      +.++..+ +|++.+|... |..|++++..|+.+|. +++++.+   ++.+++.++.+|++.+.-
T Consensus       160 ~l~~~~~-~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~---~~~~~~~~~~~Ga~~~~~  218 (348)
T 2d8a_A          160 TVLAGPI-SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEP---SDFRRELAKKVGADYVIN  218 (348)
T ss_dssp             HHTTSCC-TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECS---CHHHHHHHHHHTCSEEEC
T ss_pred             HHHhcCC-CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECC---CHHHHHHHHHhCCCEEEC
Confidence            4455566 7777777666 9999999999999998 7766643   467788888999975543

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=89.67  E-value=1.2  Score=36.65  Aligned_cols=58  Identities=14%  Similarity=0.038  Sum_probs=42.0

Q ss_pred             HHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEE
Q 028618           60 AEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVL  121 (206)
Q Consensus        60 a~~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~  121 (206)
                      +.++..+++|++.+|.+ +|..|++.+..|+.+|.+++++...   +.+++.++.+|++.+.
T Consensus       168 ~l~~~~~~~g~~VlV~G-aG~vG~~a~qla~~~Ga~Vi~~~~~---~~~~~~~~~lGa~~v~  225 (348)
T 3two_A          168 PLKFSKVTKGTKVGVAG-FGGLGSMAVKYAVAMGAEVSVFARN---EHKKQDALSMGVKHFY  225 (348)
T ss_dssp             HHHHTTCCTTCEEEEES-CSHHHHHHHHHHHHTTCEEEEECSS---STTHHHHHHTTCSEEE
T ss_pred             HHHhcCCCCCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEeCC---HHHHHHHHhcCCCeec
Confidence            33444577887766655 5999999999999999986665433   3456677889987655

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=89.65  E-value=1.8  Score=34.36  Aligned_cols=73  Identities=7%  Similarity=-0.040  Sum_probs=50.7

Q ss_pred             CCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCC-hHHHHHHHHHHHHh
Q 028618           69 GESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKG-MKGAVQKAEEILAK  141 (206)
Q Consensus        69 ~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~-~~~~~~~a~~~~~~  141 (206)
                      |+..+||..++--|+++|......|.+++++-.........+.+...|.++..+..|-. .++..+...+..++
T Consensus         7 gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~   80 (258)
T 4gkb_A            7 DKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIAT   80 (258)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHH
Confidence            34788999999999999999999999988887766666666777777876666654421 23333344444444

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=89.64  E-value=3.7  Score=31.54  Aligned_cols=32  Identities=16%  Similarity=0.146  Sum_probs=24.2

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHCCCcEEEEeC
Q 028618           70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMP  101 (206)
Q Consensus        70 ~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp  101 (206)
                      +..+|+..+|--|.++|......|.+++++..
T Consensus        15 k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r   46 (247)
T 3i1j_A           15 RVILVTGAARGIGAAAARAYAAHGASVVLLGR   46 (247)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEec
Confidence            36788888888888888888777777665543

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=89.54  E-value=3.6  Score=33.61  Aligned_cols=53  Identities=26%  Similarity=0.249  Sum_probs=40.2

Q ss_pred             CCCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEE
Q 028618           65 LITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVL  121 (206)
Q Consensus        65 ~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~  121 (206)
                      .+++|++.+|... |..|++++..++.+|.+++++..   ++.+++.++.+|++.+.
T Consensus       161 ~~~~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~---~~~~~~~~~~lGa~~~~  213 (339)
T 1rjw_A          161 GAKPGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDI---GDEKLELAKELGADLVV  213 (339)
T ss_dssp             TCCTTCEEEEECC-STTHHHHHHHHHHTTCEEEEECS---CHHHHHHHHHTTCSEEE
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHHCCCCEEe
Confidence            4677767666666 77999999999999987665533   46778888899997554

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=89.32  E-value=3  Score=32.79  Aligned_cols=32  Identities=25%  Similarity=0.272  Sum_probs=25.1

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHCCCcEEEEeC
Q 028618           70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMP  101 (206)
Q Consensus        70 ~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp  101 (206)
                      +..+|+..+|--|.++|......|.+++++..
T Consensus        21 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r   52 (266)
T 4egf_A           21 KRALITGATKGIGADIARAFAAAGARLVLSGR   52 (266)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence            36788888888899998888888887666544

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=89.26  E-value=4.4  Score=32.06  Aligned_cols=88  Identities=11%  Similarity=0.207  Sum_probs=46.1

Q ss_pred             eEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCC-eEE-c
Q 028618           71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPN-AYM-L  148 (206)
Q Consensus        71 ~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~-~~~-~  148 (206)
                      ..+|+..+|--|.++|......|.+++++.                       .+  .....+.+.++.+..+. ..+ .
T Consensus        14 ~vlITGas~GIG~~~a~~L~~~G~~V~~~~-----------------------r~--~~~~~~~~~~l~~~~~~~~~~~~   68 (311)
T 3o26_A           14 CAVVTGGNKGIGFEICKQLSSNGIMVVLTC-----------------------RD--VTKGHEAVEKLKNSNHENVVFHQ   68 (311)
T ss_dssp             EEEESSCSSHHHHHHHHHHHHTTCEEEEEE-----------------------SC--HHHHHHHHHHHHTTTCCSEEEEE
T ss_pred             EEEEecCCchHHHHHHHHHHHCCCEEEEEe-----------------------CC--HHHHHHHHHHHHhcCCCceEEEE
Confidence            567777777777777776666665544443                       32  11222222333222211 222 2


Q ss_pred             CCCCCCccHHHHHHhHHHHHHhhhCCCCCEEEEccCcch
Q 028618          149 QQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGG  187 (206)
Q Consensus       149 ~~~~~~~~~~~g~~t~~~Ei~~q~~~~~d~vv~~vG~Gg  187 (206)
                      -...++   ......+..++.+++ +.+|++|..+|..+
T Consensus        69 ~Dl~~~---~~~v~~~~~~~~~~~-g~iD~lv~nAg~~~  103 (311)
T 3o26_A           69 LDVTDP---IATMSSLADFIKTHF-GKLDILVNNAGVAG  103 (311)
T ss_dssp             CCTTSC---HHHHHHHHHHHHHHH-SSCCEEEECCCCCS
T ss_pred             ccCCCc---HHHHHHHHHHHHHhC-CCCCEEEECCcccc
Confidence            222222   123344555666666 57999999999763

>1t57_A Conserved protein MTH1675; structural genomics, FMN; HET: FMN; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.49.1.2

Probab=89.24  E-value=1.7  Score=33.40  Aligned_cols=76  Identities=20%  Similarity=0.253  Sum_probs=55.3

Q ss_pred             CCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEe-------CC--CCCHHHHHHHH
Q 028618           43 EPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITM-------PA--SMSLERRIILR  113 (206)
Q Consensus        43 ~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivv-------p~--~~~~~~~~~~~  113 (206)
                      +|.--+-+......+.+|.+.|.    +..||.+++|.++..++-..  -| ++++|-       |.  ..+++.++.++
T Consensus        30 ~~G~eNT~~tl~la~era~e~~I----k~iVVASssG~TA~k~~e~~--~~-~lVvVTh~~GF~~pg~~e~~~e~~~~L~  102 (206)
T 1t57_A           30 EPGKENTERVLELVGERADQLGI----RNFVVASVSGETALRLSEMV--EG-NIVSVTHHAGFREKGQLELEDEARDALL  102 (206)
T ss_dssp             SCSGGGHHHHHHHHHHHHHHHTC----CEEEEECSSSHHHHHHHTTC--CS-EEEEECCCTTSSSTTCCSSCHHHHHHHH
T ss_pred             CCCcccHHHHHHHHHHHHHHcCC----CEEEEEeCCCHHHHHHHHHc--cC-CEEEEeCcCCCCCCCCCcCCHHHHHHHH
Confidence            45556778888888999999885    25566667788886665533  45 777665       32  35789999999


Q ss_pred             HcCCEEEEeCCC
Q 028618          114 AFGAELVLTDPA  125 (206)
Q Consensus       114 ~~Ga~v~~~~~~  125 (206)
                      ..|.+|+.-...
T Consensus       103 ~~G~~V~t~tH~  114 (206)
T 1t57_A          103 ERGVNVYAGSHA  114 (206)
T ss_dssp             HHTCEEECCSCT
T ss_pred             hCCCEEEEeecc
Confidence            999999876554

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=89.13  E-value=2.7  Score=34.79  Aligned_cols=59  Identities=19%  Similarity=0.186  Sum_probs=43.8

Q ss_pred             HcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCCc-EEEEeCCCCCHHHHHHHHHcCCEEEEeCC
Q 028618           62 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYR-LIITMPASMSLERRIILRAFGAELVLTDP  124 (206)
Q Consensus        62 ~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~-~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~  124 (206)
                      +...+++|++.+|.+ +|.-|++.+..|+.+|.+ ++++.+   ++.+++.++.+|++.++...
T Consensus       184 ~~~~~~~g~~VlV~G-aG~vG~~a~qlak~~Ga~~Vi~~~~---~~~~~~~a~~lGa~~vi~~~  243 (371)
T 1f8f_A          184 NALKVTPASSFVTWG-AGAVGLSALLAAKVCGASIIIAVDI---VESRLELAKQLGATHVINSK  243 (371)
T ss_dssp             TTTCCCTTCEEEEES-CSHHHHHHHHHHHHHTCSEEEEEES---CHHHHHHHHHHTCSEEEETT
T ss_pred             hccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEECC---CHHHHHHHHHcCCCEEecCC
Confidence            556678887766665 688999999999999985 444432   46788888999997665443

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=89.12  E-value=3.8  Score=33.37  Aligned_cols=57  Identities=21%  Similarity=0.235  Sum_probs=44.1

Q ss_pred             HcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHH-HcCCEEEE
Q 028618           62 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILR-AFGAELVL  121 (206)
Q Consensus        62 ~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~-~~Ga~v~~  121 (206)
                      +...+++|+..+|.+.+|..|.+++..++..|.+++++..   ++.+++.++ .+|++.+.
T Consensus       149 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~---~~~~~~~~~~~~g~~~~~  206 (345)
T 2j3h_A          149 EVCSPKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAG---SKEKVDLLKTKFGFDDAF  206 (345)
T ss_dssp             TTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHTSCCSEEE
T ss_pred             HHhCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHHcCCceEE
Confidence            4556778877788888899999999999999987666543   456777777 69987554

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=89.12  E-value=2.5  Score=32.33  Aligned_cols=33  Identities=21%  Similarity=0.238  Sum_probs=26.2

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCC
Q 028618           70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPA  102 (206)
Q Consensus        70 ~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~  102 (206)
                      +..+|+..+|.-|.++|......|.++++....
T Consensus         3 k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~   35 (235)
T 3l77_A            3 KVAVITGASRGIGEAIARALARDGYALALGARS   35 (235)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence            367888888999999999988888886666543

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=88.90  E-value=4.6  Score=31.72  Aligned_cols=33  Identities=18%  Similarity=0.229  Sum_probs=26.8

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCC
Q 028618           70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPA  102 (206)
Q Consensus        70 ~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~  102 (206)
                      +..+|+..+|.-|.++|......|.+++++...
T Consensus        22 k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~   54 (267)
T 1vl8_A           22 RVALVTGGSRGLGFGIAQGLAEAGCSVVVASRN   54 (267)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence            467899999999999999888888887766543

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=88.83  E-value=4  Score=33.51  Aligned_cols=58  Identities=22%  Similarity=0.247  Sum_probs=42.8

Q ss_pred             HHcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEe
Q 028618           61 EAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLT  122 (206)
Q Consensus        61 ~~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~  122 (206)
                      .+...+++|++.+|.+ +|..|++++..|+.+|.+++++.   .++.+++.++.+|++.+..
T Consensus       161 l~~~~~~~g~~VlV~G-aG~vG~~a~qla~~~Ga~Vi~~~---~~~~~~~~~~~lGa~~~~~  218 (352)
T 1e3j_A          161 CRRAGVQLGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTA---RSPRRLEVAKNCGADVTLV  218 (352)
T ss_dssp             HHHHTCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEE---SCHHHHHHHHHTTCSEEEE
T ss_pred             HHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEc---CCHHHHHHHHHhCCCEEEc
Confidence            3444577887777766 58899999999999999844432   3567888889999975543

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=88.72  E-value=4  Score=34.19  Aligned_cols=57  Identities=25%  Similarity=0.209  Sum_probs=42.8

Q ss_pred             HHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCC-cEEEEeCCCCCHHHHHHHHHcCCEEE
Q 028618           60 AEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQY-RLIITMPASMSLERRIILRAFGAELV  120 (206)
Q Consensus        60 a~~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~-~~~ivvp~~~~~~~~~~~~~~Ga~v~  120 (206)
                      +.+...+++|++.+|.+ +|.-|...+..|+.+|. +++++.+   ++.+++.++.+|++++
T Consensus       177 al~~~~~~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~---~~~~~~~a~~lGa~~i  234 (398)
T 2dph_A          177 GCVSAGVKPGSHVYIAG-AGPVGRCAAAGARLLGAACVIVGDQ---NPERLKLLSDAGFETI  234 (398)
T ss_dssp             HHHHTTCCTTCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEEES---CHHHHHHHHTTTCEEE
T ss_pred             HHHHcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcC---CHHHHHHHHHcCCcEE
Confidence            34556678887766665 59999999999999998 5655543   4577888899999844

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=88.72  E-value=2.2  Score=33.84  Aligned_cols=56  Identities=9%  Similarity=-0.051  Sum_probs=41.7

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCC
Q 028618           70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPA  125 (206)
Q Consensus        70 ~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~  125 (206)
                      +..+|+..+|--|.++|......|.+++++-.........+.+...|.++..+..|
T Consensus        32 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D   87 (273)
T 3uf0_A           32 RTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVADEIADGGGSAEAVVAD   87 (273)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTHHHHHHHHHHTTTCEEEEEECC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHHHHHhcCCcEEEEEec
Confidence            46889999999999999999999999887764332234455566778887777654

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=88.66  E-value=2.5  Score=35.13  Aligned_cols=55  Identities=24%  Similarity=0.225  Sum_probs=42.6

Q ss_pred             CCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCC
Q 028618           66 ITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDP  124 (206)
Q Consensus        66 ~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~  124 (206)
                      +++|++.+|.+.+|.-|++++..|+..|.+++++.    ++.+++.++.+|++.+.-..
T Consensus       181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~----~~~~~~~~~~lGa~~v~~~~  235 (375)
T 2vn8_A          181 NCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC----SQDASELVRKLGADDVIDYK  235 (375)
T ss_dssp             TCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE----CGGGHHHHHHTTCSEEEETT
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe----ChHHHHHHHHcCCCEEEECC
Confidence            67887777777789999999999999998766654    23567778899998665443

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=88.18  E-value=3.2  Score=33.84  Aligned_cols=62  Identities=15%  Similarity=0.133  Sum_probs=40.1

Q ss_pred             HHcCCCCCCCeEEEeeCCCchHHHHHHHHHH-CCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCC
Q 028618           61 EAKGLITPGESVLIEPTSGNTGIGLAFMAAA-KQYRLIITMPASMSLERRIILRAFGAELVLTDPAK  126 (206)
Q Consensus        61 ~~~g~~~~~~~~vv~aSsGN~g~alA~~a~~-~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~  126 (206)
                      .+....++|++.+|. .+|..|...+..+++ .|.+++++.+   ++.|++..+.+|++.+.-..+.
T Consensus       156 l~~~~~~~g~~VlV~-GaG~~g~~a~~~a~~~~g~~Vi~~~~---~~~r~~~~~~~Ga~~~i~~~~~  218 (348)
T 4eez_A          156 IKVSGVKPGDWQVIF-GAGGLGNLAIQYAKNVFGAKVIAVDI---NQDKLNLAKKIGADVTINSGDV  218 (348)
T ss_dssp             HHHHTCCTTCEEEEE-CCSHHHHHHHHHHHHTSCCEEEEEES---CHHHHHHHHHTTCSEEEEC-CC
T ss_pred             ecccCCCCCCEEEEE-cCCCccHHHHHHHHHhCCCEEEEEEC---cHHHhhhhhhcCCeEEEeCCCC
Confidence            444456787666665 456666555566654 5777766643   5678889999999877665543

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=88.00  E-value=6.9  Score=30.56  Aligned_cols=32  Identities=6%  Similarity=0.049  Sum_probs=25.1

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHCCCcEEEEeC
Q 028618           70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMP  101 (206)
Q Consensus        70 ~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp  101 (206)
                      +..+|+..+|--|.++|......|.+++++-.
T Consensus         9 k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r   40 (265)
T 3lf2_A            9 AVAVVTGGSSGIGLATVELLLEAGAAVAFCAR   40 (265)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeC
Confidence            46788888888899999888888887666543

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=88.00  E-value=1.4  Score=35.81  Aligned_cols=57  Identities=26%  Similarity=0.338  Sum_probs=42.1

Q ss_pred             HcCCCCCCC-eEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEE
Q 028618           62 AKGLITPGE-SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVL  121 (206)
Q Consensus        62 ~~g~~~~~~-~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~  121 (206)
                      ++..+++++ +.+|.+.+|..|++++..|+.+|.+++++....   .+++.++.+|++.+.
T Consensus       142 ~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~---~~~~~~~~lGa~~~i  199 (328)
T 1xa0_A          142 EEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKA---AEHDYLRVLGAKEVL  199 (328)
T ss_dssp             HHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCT---TCHHHHHHTTCSEEE
T ss_pred             hhcCCCCCCceEEEecCCCHHHHHHHHHHHHCCCEEEEEECCH---HHHHHHHHcCCcEEE
Confidence            344566764 667777779999999999999999877766543   345666789987554

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=87.90  E-value=9.5  Score=32.50  Aligned_cols=100  Identities=12%  Similarity=-0.035  Sum_probs=61.0

Q ss_pred             CCCCCCChhhHHHHHHHHHHHHcCCC-CCCCeEEEeeCCCchHHHHHHHHHH-CCCcEEEEeCCCCC-------------
Q 028618           41 MMEPCSSVKDRIGYSMISDAEAKGLI-TPGESVLIEPTSGNTGIGLAFMAAA-KQYRLIITMPASMS-------------  105 (206)
Q Consensus        41 ~~~ptGS~K~R~a~~~~~~a~~~g~~-~~~~~~vv~aSsGN~g~alA~~a~~-~g~~~~ivvp~~~~-------------  105 (206)
                      +.+|.|.-+.  ....+...+.++.+ ..++..+|+..++-.|+|+|..... .|.+++++-.....             
T Consensus        20 ~~hp~gc~~~--v~~qi~~~~~~~~~~~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~   97 (405)
T 3zu3_A           20 TAHPTGCEAN--VKKQIDYVTTEGPIANGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNS   97 (405)
T ss_dssp             CCCHHHHHHH--HHHHHHHHHHHCCCTTCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHH
T ss_pred             CCCCHHHHHH--HHHHHHHHHhcCCcCCCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhH
Confidence            3455554332  45566667777776 4445678888888899999999888 99988876543221             


Q ss_pred             HHHHHHHHHcCCEEEEeCCCCC-hHHHHHHHHHHHHhC
Q 028618          106 LERRIILRAFGAELVLTDPAKG-MKGAVQKAEEILAKT  142 (206)
Q Consensus       106 ~~~~~~~~~~Ga~v~~~~~~~~-~~~~~~~a~~~~~~~  142 (206)
                      ....+.++..|.++..+..|-. .++..+...+..++.
T Consensus        98 ~~~~~~~~~~G~~a~~i~~Dvtd~~~v~~~v~~i~~~~  135 (405)
T 3zu3_A           98 AAFHKFAAQKGLYAKSINGDAFSDEIKQLTIDAIKQDL  135 (405)
T ss_dssp             HHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            1123356778887776654432 233333344455554

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=87.87  E-value=1.6  Score=35.10  Aligned_cols=56  Identities=27%  Similarity=0.364  Sum_probs=42.2

Q ss_pred             HcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEE
Q 028618           62 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVL  121 (206)
Q Consensus        62 ~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~  121 (206)
                      +.+ +++|++.+|.+.+|..|++++..|+..|.+++++.+.   +.+++.++.+|++.+.
T Consensus       120 ~~~-~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~---~~~~~~~~~~ga~~~~  175 (302)
T 1iz0_A          120 RAQ-ARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASR---PEKLALPLALGAEEAA  175 (302)
T ss_dssp             HTT-CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESS---GGGSHHHHHTTCSEEE
T ss_pred             Hhc-CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHhcCCCEEE
Confidence            356 7888777787778999999999999999987776653   3445566778886543

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=87.59  E-value=4.5  Score=31.48  Aligned_cols=56  Identities=14%  Similarity=0.080  Sum_probs=42.7

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCC-CHHHHHHHHHcCCEEEEeCCC
Q 028618           70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASM-SLERRIILRAFGAELVLTDPA  125 (206)
Q Consensus        70 ~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~-~~~~~~~~~~~Ga~v~~~~~~  125 (206)
                      +..+|+..+|--|.++|......|.+++++-.... .....+.++..|.++..+..|
T Consensus         8 k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D   64 (252)
T 3h7a_A            8 ATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLD   64 (252)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECC
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECc
Confidence            46789999999999999999999999887765432 334455667778888777655

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=87.56  E-value=3.4  Score=35.43  Aligned_cols=98  Identities=15%  Similarity=0.046  Sum_probs=59.5

Q ss_pred             CCCCChhhHHHHHHHHHHHHcCCC-CCCCeEEEeeCCCchHHHHHHHHHH-CCCcEEEEeCCCCC-H------------H
Q 028618           43 EPCSSVKDRIGYSMISDAEAKGLI-TPGESVLIEPTSGNTGIGLAFMAAA-KQYRLIITMPASMS-L------------E  107 (206)
Q Consensus        43 ~ptGS~K~R~a~~~~~~a~~~g~~-~~~~~~vv~aSsGN~g~alA~~a~~-~g~~~~ivvp~~~~-~------------~  107 (206)
                      .|.|.++.  ....+....+++++ ..++..+|+..++--|+|+|..... .|.+++++-..... .            .
T Consensus        36 ~p~g~~~~--v~~qi~y~~~~~~~~~~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a  113 (422)
T 3s8m_A           36 HPLGCERN--VLEQIAATRARGVRNDGPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAA  113 (422)
T ss_dssp             CHHHHHHH--HHHHHHHHHHTCCCSSSCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHH
T ss_pred             CchhHHHH--HHHHHHHHhhccccccCCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHH
Confidence            34454332  33445556677776 3456778888888899999999988 99998877543221 1            1


Q ss_pred             HHHHHHHcCCEEEEeCCCCChHHHHHH-HHHHHHhC
Q 028618          108 RRIILRAFGAELVLTDPAKGMKGAVQK-AEEILAKT  142 (206)
Q Consensus       108 ~~~~~~~~Ga~v~~~~~~~~~~~~~~~-a~~~~~~~  142 (206)
                      ..+.++..|.++..+..|-.-.+..+. ..+..++.
T Consensus       114 ~~~~~~~~G~~a~~i~~Dvtd~~~v~~~v~~i~~~~  149 (422)
T 3s8m_A          114 FDKHAKAAGLYSKSINGDAFSDAARAQVIELIKTEM  149 (422)
T ss_dssp             HHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHS
T ss_pred             HHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            235667889877766554322333333 34444444

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=87.50  E-value=5.3  Score=31.66  Aligned_cols=31  Identities=13%  Similarity=0.184  Sum_probs=25.9

Q ss_pred             eEEEeeCCCchHHHHHHHHHHCCCcEEEEeC
Q 028618           71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMP  101 (206)
Q Consensus        71 ~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp  101 (206)
                      ..+|+..+|.-|.++|......|.+++++..
T Consensus        28 ~vlITGasggiG~~la~~L~~~G~~V~~~~r   58 (302)
T 1w6u_A           28 VAFITGGGTGLGKGMTTLLSSLGAQCVIASR   58 (302)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEeC
Confidence            6789999999999999988888888766644

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=87.47  E-value=2.7  Score=34.98  Aligned_cols=58  Identities=21%  Similarity=0.214  Sum_probs=42.6

Q ss_pred             HHcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCC-cEEEEeCCCCCHHHHHHHHHcCCEEEEe
Q 028618           61 EAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQY-RLIITMPASMSLERRIILRAFGAELVLT  122 (206)
Q Consensus        61 ~~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~-~~~ivvp~~~~~~~~~~~~~~Ga~v~~~  122 (206)
                      .+...+++|++.+|.+ .|..|++.+..|+.+|. +++++-+   ++.+++.++.+|++.+..
T Consensus       186 ~~~~~~~~g~~VlV~G-aG~vG~~a~q~a~~~Ga~~Vi~~~~---~~~~~~~a~~lGa~~vi~  244 (378)
T 3uko_A          186 WNTAKVEPGSNVAIFG-LGTVGLAVAEGAKTAGASRIIGIDI---DSKKYETAKKFGVNEFVN  244 (378)
T ss_dssp             HTTTCCCTTCCEEEEC-CSHHHHHHHHHHHHHTCSCEEEECS---CTTHHHHHHTTTCCEEEC
T ss_pred             HhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcC---CHHHHHHHHHcCCcEEEc
Confidence            3556678887766665 48999999999999999 5555532   335677888999976543

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=87.16  E-value=2  Score=35.52  Aligned_cols=50  Identities=20%  Similarity=0.195  Sum_probs=38.1

Q ss_pred             CeEEEeeCCCchHHHH-HHHH-HHCCCc-EEEEeCCCCCHHHHHHHHHcCCEEE
Q 028618           70 ESVLIEPTSGNTGIGL-AFMA-AAKQYR-LIITMPASMSLERRIILRAFGAELV  120 (206)
Q Consensus        70 ~~~vv~aSsGN~g~al-A~~a-~~~g~~-~~ivvp~~~~~~~~~~~~~~Ga~v~  120 (206)
                      ++.+|.+. |..|+.. +..| +.+|.+ ++++.+......+++.++.+|++.+
T Consensus       174 ~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~lGa~~v  226 (357)
T 2b5w_A          174 SSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDATYV  226 (357)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHTTCEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHcCCccc
Confidence            56666665 9999999 9999 999998 7776655433336778889999876

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=86.97  E-value=5.8  Score=31.21  Aligned_cols=72  Identities=13%  Similarity=0.133  Sum_probs=48.3

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCC--------HHHHHHHHHcCCEEEEeCCCCC-hHHHHHHHHHHHH
Q 028618           70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS--------LERRIILRAFGAELVLTDPAKG-MKGAVQKAEEILA  140 (206)
Q Consensus        70 ~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~--------~~~~~~~~~~Ga~v~~~~~~~~-~~~~~~~a~~~~~  140 (206)
                      +..+|+..+|--|.++|......|.+++++......        ......++..|.++..+..|-. .++..+...+..+
T Consensus         7 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   86 (274)
T 3e03_A            7 KTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAATVD   86 (274)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHH
Confidence            478899999999999999999999988877655332        3344556677888887765532 2333333444444


Q ss_pred             h
Q 028618          141 K  141 (206)
Q Consensus       141 ~  141 (206)
                      +
T Consensus        87 ~   87 (274)
T 3e03_A           87 T   87 (274)
T ss_dssp             H
T ss_pred             H
Confidence            3

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=86.80  E-value=7.9  Score=30.49  Aligned_cols=32  Identities=13%  Similarity=0.079  Sum_probs=27.1

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHCCCcEEEEeC
Q 028618           70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMP  101 (206)
Q Consensus        70 ~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp  101 (206)
                      +..+|+..+|--|.++|......|.+++++-.
T Consensus        12 k~~lVTGas~gIG~aia~~la~~G~~V~~~~~   43 (286)
T 3uve_A           12 KVAFVTGAARGQGRSHAVRLAQEGADIIAVDI   43 (286)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCeEEEEec
Confidence            47889999999999999999999998877643

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=86.76  E-value=2.4  Score=35.09  Aligned_cols=51  Identities=10%  Similarity=0.130  Sum_probs=39.7

Q ss_pred             CCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEE
Q 028618           69 GESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV  120 (206)
Q Consensus        69 ~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~  120 (206)
                      |++.+|.+. |..|.+++..++.+|.+++++.+......+.+.++.+|++.+
T Consensus       181 g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~~ga~~v  231 (366)
T 2cdc_A          181 CRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEETKTNYY  231 (366)
T ss_dssp             TCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHHHTCEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHHhCCcee
Confidence            767777776 999999999999999977776554323366778888999876

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=86.71  E-value=14  Score=31.55  Aligned_cols=100  Identities=10%  Similarity=-0.037  Sum_probs=54.6

Q ss_pred             CCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHH--HHHHHHHCCCcEEEEeCCCCC-------------
Q 028618           41 MMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIG--LAFMAAAKQYRLIITMPASMS-------------  105 (206)
Q Consensus        41 ~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~a--lA~~a~~~g~~~~ivvp~~~~-------------  105 (206)
                      ...|.|..+.  ....+.....++....++..+|+..++--|.+  +|.+....|.+++++-.....             
T Consensus        34 ~~~p~g~~~~--v~~qi~y~~~~~~~~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~  111 (418)
T 4eue_A           34 DVHPYGCRRE--VLNQIDYCKKAIGFRGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNN  111 (418)
T ss_dssp             CCCHHHHHHH--HHHHHHHHHHSCCCCCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHH
T ss_pred             cCCCccHHHH--HHHHHHHHhccCcCCCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchH
Confidence            3345454332  22334444566666666677888777777777  444444459888777644321             


Q ss_pred             HHHHHHHHHcCCEEEEeCCCCChHHHH-HHHHHHHHhC
Q 028618          106 LERRIILRAFGAELVLTDPAKGMKGAV-QKAEEILAKT  142 (206)
Q Consensus       106 ~~~~~~~~~~Ga~v~~~~~~~~~~~~~-~~a~~~~~~~  142 (206)
                      ....+.++..|.++..+..|-.-.+.. +...+..++.
T Consensus       112 ~~~~~~~~~~g~~~~~~~~Dvtd~~~v~~~v~~i~~~~  149 (418)
T 4eue_A          112 IFFKEFAKKKGLVAKNFIEDAFSNETKDKVIKYIKDEF  149 (418)
T ss_dssp             HHHHHHHHHTTCCEEEEESCTTCHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHc
Confidence            233345577888777665443223333 3344444444

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=86.61  E-value=5.4  Score=31.63  Aligned_cols=31  Identities=26%  Similarity=0.347  Sum_probs=23.9

Q ss_pred             eEEEeeCCCchHHHHHHHHHHCCCcEEEEeC
Q 028618           71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMP  101 (206)
Q Consensus        71 ~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp  101 (206)
                      ..+|+..+|--|.++|......|.+++++-.
T Consensus        35 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r   65 (281)
T 4dry_A           35 IALVTGGGTGVGRGIAQALSAEGYSVVITGR   65 (281)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC
Confidence            6788888888888888888778877666543

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=86.47  E-value=10  Score=30.60  Aligned_cols=32  Identities=13%  Similarity=0.053  Sum_probs=26.8

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHCCCcEEEEeC
Q 028618           70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMP  101 (206)
Q Consensus        70 ~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp  101 (206)
                      +..+|+..+|--|.++|......|.+++++-.
T Consensus        47 k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~   78 (317)
T 3oec_A           47 KVAFITGAARGQGRTHAVRLAQDGADIVAIDL   78 (317)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCeEEEEec
Confidence            36788888899999999999999998887743

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=86.44  E-value=1.2  Score=36.31  Aligned_cols=57  Identities=23%  Similarity=0.335  Sum_probs=41.3

Q ss_pred             HcCCCCCCC-eEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEE
Q 028618           62 AKGLITPGE-SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVL  121 (206)
Q Consensus        62 ~~g~~~~~~-~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~  121 (206)
                      ++..+++++ +.+|.+.+|..|.+++..|+.+|.+++++.+..   .+++.++.+|++.+.
T Consensus       143 ~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~---~~~~~~~~lGa~~v~  200 (330)
T 1tt7_A          143 EQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNR---EAADYLKQLGASEVI  200 (330)
T ss_dssp             HHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSS---STHHHHHHHTCSEEE
T ss_pred             HhcCcCCCCceEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHHHcCCcEEE
Confidence            344466764 677777779999999999999999877776543   345566778886543

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=86.44  E-value=5.1  Score=31.39  Aligned_cols=68  Identities=21%  Similarity=0.208  Sum_probs=47.1

Q ss_pred             eEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHh
Q 028618           71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAK  141 (206)
Q Consensus        71 ~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~  141 (206)
                      ..+|+..+|--|.++|......|.+++++......  ..+.++..++..+.++-.. .++..+...+..++
T Consensus        29 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~   96 (260)
T 3gem_A           29 PILITGASQRVGLHCALRLLEHGHRVIISYRTEHA--SVTELRQAGAVALYGDFSC-ETGIMAFIDLLKTQ   96 (260)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCH--HHHHHHHHTCEEEECCTTS-HHHHHHHHHHHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHH--HHHHHHhcCCeEEECCCCC-HHHHHHHHHHHHHh
Confidence            67899999999999999999999998877655432  2455566788877777553 33444444444444

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=86.34  E-value=2  Score=35.54  Aligned_cols=58  Identities=19%  Similarity=0.161  Sum_probs=41.3

Q ss_pred             HHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEE
Q 028618           60 AEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVL  121 (206)
Q Consensus        60 a~~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~  121 (206)
                      +..+..+++|++.+|... |..|+.++..|+.+|.+++++.+..   .+++.++.+|++.++
T Consensus       171 ~l~~~~~~~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~---~~~~~~~~lGa~~v~  228 (360)
T 1piw_A          171 PLVRNGCGPGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSS---RKREDAMKMGADHYI  228 (360)
T ss_dssp             HHHHTTCSTTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSS---TTHHHHHHHTCSEEE
T ss_pred             HHHHcCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCH---HHHHHHHHcCCCEEE
Confidence            334455778877666666 9999999999999999866665433   345566778887554

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=86.26  E-value=6.1  Score=32.58  Aligned_cols=72  Identities=17%  Similarity=0.156  Sum_probs=49.1

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCC--------HHHHHHHHHcCCEEEEeCCCCC-hHHHHHHHHHHHH
Q 028618           70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS--------LERRIILRAFGAELVLTDPAKG-MKGAVQKAEEILA  140 (206)
Q Consensus        70 ~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~--------~~~~~~~~~~Ga~v~~~~~~~~-~~~~~~~a~~~~~  140 (206)
                      +..+|+..+|--|.++|......|.+++++......        ....+.++..|.++..+..|-. .++..+...+..+
T Consensus        46 k~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~  125 (346)
T 3kvo_A           46 CTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEKAIK  125 (346)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            467888899999999999999999998888755432        2445667788988887765432 2333333444444


Q ss_pred             h
Q 028618          141 K  141 (206)
Q Consensus       141 ~  141 (206)
                      +
T Consensus       126 ~  126 (346)
T 3kvo_A          126 K  126 (346)
T ss_dssp             H
T ss_pred             H
Confidence            3

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=86.14  E-value=7.8  Score=30.49  Aligned_cols=31  Identities=13%  Similarity=0.147  Sum_probs=25.3

Q ss_pred             eEEEeeCCCchHHHHHHHHHHCCCcEEEEeC
Q 028618           71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMP  101 (206)
Q Consensus        71 ~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp  101 (206)
                      ..+|+..+|--|.++|......|.+++++..
T Consensus        29 ~~lVTGas~GIG~aia~~l~~~G~~V~~~~r   59 (277)
T 4fc7_A           29 VAFITGGGSGIGFRIAEIFMRHGCHTVIASR   59 (277)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEES
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEeC
Confidence            6788888888999999888888887766644

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=86.06  E-value=2.9  Score=34.46  Aligned_cols=58  Identities=29%  Similarity=0.359  Sum_probs=42.7

Q ss_pred             HHcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCC-cEEEEeCCCCCHHHHHHHHHcCCEEEEe
Q 028618           61 EAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQY-RLIITMPASMSLERRIILRAFGAELVLT  122 (206)
Q Consensus        61 ~~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~-~~~ivvp~~~~~~~~~~~~~~Ga~v~~~  122 (206)
                      .+...+++|++.+|.+ +|..|++.+..|+.+|. +++++.+   ++.+++.++.+|++.++.
T Consensus       164 l~~~~~~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~---~~~~~~~a~~lGa~~vi~  222 (356)
T 1pl8_A          164 CRRGGVTLGHKVLVCG-AGPIGMVTLLVAKAMGAAQVVVTDL---SATRLSKAKEIGADLVLQ  222 (356)
T ss_dssp             HHHHTCCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEES---CHHHHHHHHHTTCSEEEE
T ss_pred             HHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECC---CHHHHHHHHHhCCCEEEc
Confidence            3445577887766665 68899999999999999 5555533   467788889999975443

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=85.95  E-value=9.6  Score=28.90  Aligned_cols=30  Identities=27%  Similarity=0.337  Sum_probs=24.9

Q ss_pred             eEEEeeCCCchHHHHHHHHHHCCCcEEEEe
Q 028618           71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITM  100 (206)
Q Consensus        71 ~~vv~aSsGN~g~alA~~a~~~g~~~~ivv  100 (206)
                      ..+|+..+|..|.++|......|.+++++.
T Consensus         3 ~vlITGasggiG~~~a~~l~~~G~~v~~~~   32 (245)
T 2ph3_A            3 KALITGASRGIGRAIALRLAEDGFALAIHY   32 (245)
T ss_dssp             EEEETTTTSHHHHHHHHHHHTTTCEEEEEE
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEc
Confidence            578888999999999988888888777663

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=85.77  E-value=5.2  Score=31.94  Aligned_cols=55  Identities=13%  Similarity=0.024  Sum_probs=41.2

Q ss_pred             eEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCC-CHHHHHHHHHcCCEEEEeCCC
Q 028618           71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASM-SLERRIILRAFGAELVLTDPA  125 (206)
Q Consensus        71 ~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~-~~~~~~~~~~~Ga~v~~~~~~  125 (206)
                      +.+|+..+|..|.+++......|.+++++..... ....+..+...|++++..+-+
T Consensus        13 ~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~   68 (318)
T 2r6j_A           13 KILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELD   68 (318)
T ss_dssp             CEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTT
T ss_pred             eEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecCC
Confidence            5788899999999999999889999988886643 333344455667777766643

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=85.77  E-value=2  Score=34.74  Aligned_cols=54  Identities=20%  Similarity=0.322  Sum_probs=40.8

Q ss_pred             CCCCC-eEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEe
Q 028618           66 ITPGE-SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLT  122 (206)
Q Consensus        66 ~~~~~-~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~  122 (206)
                      +++++ +.+|.+.+|..|++.+..|+.+|.+++++.+.   +.+++.++.+|++-+.-
T Consensus       143 ~~~~~g~VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~---~~~~~~~~~lGa~~vi~  197 (324)
T 3nx4_A          143 IRPQDGEVVVTGASGGVGSTAVALLHKLGYQVAAVSGR---ESTHGYLKSLGANRILS  197 (324)
T ss_dssp             CCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESC---GGGHHHHHHHTCSEEEE
T ss_pred             cCCCCCeEEEECCCcHHHHHHHHHHHHcCCEEEEEeCC---HHHHHHHHhcCCCEEEe
Confidence            44532 46666677999999999999999988877654   45677888899876543

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=85.74  E-value=9.1  Score=30.03  Aligned_cols=32  Identities=19%  Similarity=0.114  Sum_probs=26.8

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHCCCcEEEEeC
Q 028618           70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMP  101 (206)
Q Consensus        70 ~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp  101 (206)
                      +..+|+..+|--|.++|......|.+++++-.
T Consensus        12 k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r   43 (277)
T 3tsc_A           12 RVAFITGAARGQGRAHAVRMAAEGADIIAVDI   43 (277)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CEEEEECCccHHHHHHHHHHHHcCCEEEEEec
Confidence            46788888898999999999999998877754

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=85.35  E-value=3.6  Score=32.61  Aligned_cols=72  Identities=13%  Similarity=0.066  Sum_probs=47.7

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCC-CHHHHHHHHHcCCEEEEeCCCCC-hHHHHHHHHHHHHh
Q 028618           70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASM-SLERRIILRAFGAELVLTDPAKG-MKGAVQKAEEILAK  141 (206)
Q Consensus        70 ~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~-~~~~~~~~~~~Ga~v~~~~~~~~-~~~~~~~a~~~~~~  141 (206)
                      +..+||..++--|+++|......|.+++++-.... -....+.++..|.+++.+..|-. .++..+...+..++
T Consensus         8 KvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~   81 (254)
T 4fn4_A            8 KVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFET   81 (254)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            47889999999999999999999998777643321 12335567788988887765432 33344444444444

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=85.06  E-value=5.1  Score=31.65  Aligned_cols=70  Identities=17%  Similarity=0.019  Sum_probs=44.3

Q ss_pred             CeEEEeeCCCc--hHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCC--EEEEeCCCCChHHHHHHHHHHHHh
Q 028618           70 ESVLIEPTSGN--TGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGA--ELVLTDPAKGMKGAVQKAEEILAK  141 (206)
Q Consensus        70 ~~~vv~aSsGN--~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga--~v~~~~~~~~~~~~~~~a~~~~~~  141 (206)
                      +..+|+..+|+  -|.++|......|.+++++.... .....+.+...+.  .++.++-.. .++..+...+..++
T Consensus        27 k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~l~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~  100 (280)
T 3nrc_A           27 KKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ-FKDRVEKLCAEFNPAAVLPCDVIS-DQEIKDLFVELGKV  100 (280)
T ss_dssp             CEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT-CHHHHHHHHGGGCCSEEEECCTTC-HHHHHHHHHHHHHH
T ss_pred             CEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch-HHHHHHHHHHhcCCceEEEeecCC-HHHHHHHHHHHHHH
Confidence            36788887777  89999999999999987776655 5566666654443  344444332 33444444455444

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=85.06  E-value=4.7  Score=33.35  Aligned_cols=56  Identities=21%  Similarity=0.204  Sum_probs=41.4

Q ss_pred             HcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCC-cEEEEeCCCCCHHHHHHHHHcCCEEEE
Q 028618           62 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQY-RLIITMPASMSLERRIILRAFGAELVL  121 (206)
Q Consensus        62 ~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~-~~~ivvp~~~~~~~~~~~~~~Ga~v~~  121 (206)
                      +...+++|++.+|.+ +|..|++.+..|+.+|. +++++.+   ++.+++.++.+|++.++
T Consensus       189 ~~~~~~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~---~~~~~~~a~~lGa~~vi  245 (376)
T 1e3i_A          189 NTAKVTPGSTCAVFG-LGCVGLSAIIGCKIAGASRIIAIDI---NGEKFPKAKALGATDCL  245 (376)
T ss_dssp             TTSCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECS---CGGGHHHHHHTTCSEEE
T ss_pred             HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcC---CHHHHHHHHHhCCcEEE
Confidence            456678887766665 69999999999999998 4555432   34567778899997554

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=85.06  E-value=6.1  Score=30.51  Aligned_cols=55  Identities=15%  Similarity=0.131  Sum_probs=39.3

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCC
Q 028618           70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPA  125 (206)
Q Consensus        70 ~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~  125 (206)
                      +..+|+..+|.-|.++|......|.+++++..... ....+.++..|.++..+..|
T Consensus         8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~D   62 (249)
T 2ew8_A            8 KLAVITGGANGIGRAIAERFAVEGADIAIADLVPA-PEAEAAIRNLGRRVLTVKCD   62 (249)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC-HHHHHHHHHTTCCEEEEECC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCch-hHHHHHHHhcCCcEEEEEee
Confidence            46889999999999999999999998777654331 22222556678777666544

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=85.03  E-value=5.7  Score=32.39  Aligned_cols=56  Identities=21%  Similarity=0.284  Sum_probs=41.6

Q ss_pred             CCCCCCeEEEeeCCCchHHHHHHHHHHC-CCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCC
Q 028618           65 LITPGESVLIEPTSGNTGIGLAFMAAAK-QYRLIITMPASMSLERRIILRAFGAELVLTDP  124 (206)
Q Consensus        65 ~~~~~~~~vv~aSsGN~g~alA~~a~~~-g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~  124 (206)
                      .+++|++.+|.+ +|..|++.+..|+.+ |.+++++.   .++.+++.++.+|++.+....
T Consensus       168 ~~~~g~~vlv~G-aG~vG~~a~qla~~~g~~~Vi~~~---~~~~~~~~~~~lGa~~~i~~~  224 (345)
T 3jv7_A          168 LLGPGSTAVVIG-VGGLGHVGIQILRAVSAARVIAVD---LDDDRLALAREVGADAAVKSG  224 (345)
T ss_dssp             GCCTTCEEEEEC-CSHHHHHHHHHHHHHCCCEEEEEE---SCHHHHHHHHHTTCSEEEECS
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEc---CCHHHHHHHHHcCCCEEEcCC
Confidence            467776666655 599999999999988 66666553   356888999999998765543

>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}

Probab=85.00  E-value=3.8  Score=33.59  Aligned_cols=63  Identities=21%  Similarity=0.093  Sum_probs=42.9

Q ss_pred             HcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCC--CHHHHHHHH----HcCCEEEEeCC
Q 028618           62 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASM--SLERRIILR----AFGAELVLTDP  124 (206)
Q Consensus        62 ~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~--~~~~~~~~~----~~Ga~v~~~~~  124 (206)
                      +.|.+.+|.+..+++-.+|.+++++.++.++|++++++.|+.-  ++..++.++    ..|+.+..+..
T Consensus       139 ~~g~l~~gl~va~vGD~~~va~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~~~~~~d  207 (307)
T 3tpf_A          139 WNKMQNGIAKVAFIGDSNNMCNSWLITAAILGFEISIAMPKNYKISPEIWEFAMKQALISGAKISLGYD  207 (307)
T ss_dssp             TTCCGGGCCEEEEESCSSHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEESC
T ss_pred             HhCCCCCCCEEEEEcCCCccHHHHHHHHHHcCCEEEEECCCccCCCHHHHHHHHHHHHHcCCeEEEEcC
Confidence            4455443435555556789999999999999999999999863  333333333    66777766543

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=84.90  E-value=4  Score=33.79  Aligned_cols=56  Identities=20%  Similarity=0.179  Sum_probs=41.0

Q ss_pred             HcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCC-cEEEEeCCCCCHHHHHHHHHcCCEEEE
Q 028618           62 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQY-RLIITMPASMSLERRIILRAFGAELVL  121 (206)
Q Consensus        62 ~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~-~~~ivvp~~~~~~~~~~~~~~Ga~v~~  121 (206)
                      +...+++|++.+|.+ +|.-|+..+..|+.+|. +++++.+   ++.+++.++.+|++.++
T Consensus       185 ~~~~~~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~---~~~~~~~a~~lGa~~vi  241 (373)
T 1p0f_A          185 NTAKVTPGSTCAVFG-LGGVGFSAIVGCKAAGASRIIGVGT---HKDKFPKAIELGATECL  241 (373)
T ss_dssp             TTTCCCTTCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECS---CGGGHHHHHHTTCSEEE
T ss_pred             hccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEECC---CHHHHHHHHHcCCcEEE
Confidence            456678887766665 69999999999999998 4444432   34567778899997554

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=84.88  E-value=7.8  Score=29.98  Aligned_cols=32  Identities=19%  Similarity=0.131  Sum_probs=25.2

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHCCCcEEEEeC
Q 028618           70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMP  101 (206)
Q Consensus        70 ~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp  101 (206)
                      +..+|+..+|--|.++|......|.+++++..
T Consensus        13 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r   44 (252)
T 3f1l_A           13 RIILVTGASDGIGREAAMTYARYGATVILLGR   44 (252)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeC
Confidence            46788888888899998888888887666543

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=84.88  E-value=6.8  Score=30.00  Aligned_cols=56  Identities=20%  Similarity=0.157  Sum_probs=41.0

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCC-CCC-HHHHHHHHHcCCEEEEeCCC
Q 028618           70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPA-SMS-LERRIILRAFGAELVLTDPA  125 (206)
Q Consensus        70 ~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~-~~~-~~~~~~~~~~Ga~v~~~~~~  125 (206)
                      +..+|+..+|-.|.++|......|.+++++... ... ....+.++..|.++..+..|
T Consensus         8 k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D   65 (258)
T 3afn_B            8 KRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAAD   65 (258)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECC
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECC
Confidence            367888899999999999999999998887765 322 22344556668777766554

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=84.83  E-value=3.6  Score=32.02  Aligned_cols=73  Identities=15%  Similarity=0.098  Sum_probs=45.6

Q ss_pred             CCeEEEeeCC--CchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHH-HcC-CEEEEeCCCCChHHHHHHHHHHHHhC
Q 028618           69 GESVLIEPTS--GNTGIGLAFMAAAKQYRLIITMPASMSLERRIILR-AFG-AELVLTDPAKGMKGAVQKAEEILAKT  142 (206)
Q Consensus        69 ~~~~vv~aSs--GN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~-~~G-a~v~~~~~~~~~~~~~~~a~~~~~~~  142 (206)
                      +++.+|+..+  |.-|.++|......|.+++++..........+.+. ..| ..++.++-.. .++..+...+..++.
T Consensus        14 ~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~   90 (271)
T 3ek2_A           14 GKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVAD-DAQIDALFASLKTHW   90 (271)
T ss_dssp             TCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTC-HHHHHHHHHHHHHHC
T ss_pred             CCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCC-HHHHHHHHHHHHHHc
Confidence            3477888866  88999999999999999888876544445555543 344 3344444332 334444445555544

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=84.50  E-value=13  Score=29.26  Aligned_cols=30  Identities=13%  Similarity=0.262  Sum_probs=24.3

Q ss_pred             eEEEeeCCCchHHHHHHHHHHCCCcEEEEe
Q 028618           71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITM  100 (206)
Q Consensus        71 ~~vv~aSsGN~g~alA~~a~~~g~~~~ivv  100 (206)
                      ..+|+..+|--|.++|......|.++++.-
T Consensus        27 ~~lVTGas~GIG~~ia~~la~~G~~V~~~~   56 (281)
T 3v2h_A           27 TAVITGSTSGIGLAIARTLAKAGANIVLNG   56 (281)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHTTCEEEEEC
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEe
Confidence            678888888899999988888888766553

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=84.34  E-value=4.2  Score=33.74  Aligned_cols=58  Identities=21%  Similarity=0.157  Sum_probs=41.0

Q ss_pred             HHcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEe
Q 028618           61 EAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLT  122 (206)
Q Consensus        61 ~~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~  122 (206)
                      .++..+++|++.+|.+ +|..|.+++..|+.+|.+++++...   +.+++.++.+|++.+.-
T Consensus       187 l~~~~~~~g~~VlV~G-aG~vG~~aiqlak~~Ga~Vi~~~~~---~~~~~~a~~lGa~~vi~  244 (369)
T 1uuf_A          187 LRHWQAGPGKKVGVVG-IGGLGHMGIKLAHAMGAHVVAFTTS---EAKREAAKALGADEVVN  244 (369)
T ss_dssp             HHHTTCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESS---GGGHHHHHHHTCSEEEE
T ss_pred             HHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHcCCcEEec
Confidence            3334567887766665 4889999999999999986655543   35566777899876543

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=84.01  E-value=4.7  Score=31.85  Aligned_cols=56  Identities=13%  Similarity=0.197  Sum_probs=40.2

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCC--HHHHHHHHHcCCEEEEeCCC
Q 028618           70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS--LERRIILRAFGAELVLTDPA  125 (206)
Q Consensus        70 ~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~--~~~~~~~~~~Ga~v~~~~~~  125 (206)
                      +..+|+..+|--|.++|......|.+++++......  ....+.++..|.++..+..|
T Consensus        30 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D   87 (283)
T 1g0o_A           30 KVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKAN   87 (283)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcC
Confidence            367899999999999999999999998877654321  22234566778777666544

>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*

Probab=83.89  E-value=4  Score=34.15  Aligned_cols=66  Identities=23%  Similarity=0.223  Sum_probs=44.6

Q ss_pred             HHHHHHHHHHH-HcCC-CCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEE
Q 028618           51 RIGYSMISDAE-AKGL-ITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV  120 (206)
Q Consensus        51 R~a~~~~~~a~-~~g~-~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~  120 (206)
                      ++..+.+..+. ..|. .-.| ++++....||-|..+|..++.+|.+++ +...+  +.+.+..+.+|++.+
T Consensus       155 ~Gv~~~~~~~~~~~G~~~L~G-ktV~I~G~GnVG~~~A~~l~~~GakVv-vsD~~--~~~~~~a~~~ga~~v  222 (355)
T 1c1d_A          155 VGVFEAMKATVAHRGLGSLDG-LTVLVQGLGAVGGSLASLAAEAGAQLL-VADTD--TERVAHAVALGHTAV  222 (355)
T ss_dssp             HHHHHHHHHHHHHTTCCCSTT-CEEEEECCSHHHHHHHHHHHHTTCEEE-EECSC--HHHHHHHHHTTCEEC
T ss_pred             HHHHHHHHHHHHhcCCCCCCC-CEEEEECcCHHHHHHHHHHHHCCCEEE-EEeCC--ccHHHHHHhcCCEEe
Confidence            56666766654 4453 2344 577888899999999999999999887 44322  333444456787654

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=83.85  E-value=3.7  Score=31.89  Aligned_cols=56  Identities=16%  Similarity=0.110  Sum_probs=39.4

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHCC---CcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCC
Q 028618           70 ESVLIEPTSGNTGIGLAFMAAAKQ---YRLIITMPASMSLERRIILRAFGAELVLTDPA  125 (206)
Q Consensus        70 ~~~vv~aSsGN~g~alA~~a~~~g---~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~  125 (206)
                      +..+|+..+|--|.++|......|   .+++++.........++.+...+.++..+..|
T Consensus        22 k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D   80 (267)
T 1sny_A           22 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEID   80 (267)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECC
T ss_pred             CEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhccCCceEEEEec
Confidence            367888899999999999999999   88888876544333445454445556555433

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=83.79  E-value=4.4  Score=33.51  Aligned_cols=56  Identities=16%  Similarity=0.232  Sum_probs=41.2

Q ss_pred             HcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCC-cEEEEeCCCCCHHHHHHHHHcCCEEEE
Q 028618           62 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQY-RLIITMPASMSLERRIILRAFGAELVL  121 (206)
Q Consensus        62 ~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~-~~~ivvp~~~~~~~~~~~~~~Ga~v~~  121 (206)
                      +...+++|++.+|.+ +|..|.+.+..|+.+|. +++++..   ++.+++.++.+|++.++
T Consensus       186 ~~~~~~~g~~VlV~G-aG~vG~~a~qla~~~Ga~~Vi~~~~---~~~~~~~~~~lGa~~vi  242 (374)
T 1cdo_A          186 NTAKVEPGSTCAVFG-LGAVGLAAVMGCHSAGAKRIIAVDL---NPDKFEKAKVFGATDFV  242 (374)
T ss_dssp             TTTCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECS---CGGGHHHHHHTTCCEEE
T ss_pred             hccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcC---CHHHHHHHHHhCCceEE
Confidence            456678887777765 69999999999999998 4555432   34567778889997554

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=83.70  E-value=4.8  Score=32.10  Aligned_cols=56  Identities=18%  Similarity=0.173  Sum_probs=41.3

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCC--CHHHHHHHHHcCCEEEEeCCC
Q 028618           70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASM--SLERRIILRAFGAELVLTDPA  125 (206)
Q Consensus        70 ~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~--~~~~~~~~~~~Ga~v~~~~~~  125 (206)
                      +..+|+..+|--|.++|......|.++++......  .....+.++..|.++..+..|
T Consensus        48 k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D  105 (291)
T 3ijr_A           48 KNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGD  105 (291)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECC
Confidence            36889999999999999999999999877765532  122344456778888777554

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=83.69  E-value=4.3  Score=33.61  Aligned_cols=56  Identities=16%  Similarity=0.169  Sum_probs=41.0

Q ss_pred             HcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCC-cEEEEeCCCCCHHHHHHHHHcCCEEEE
Q 028618           62 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQY-RLIITMPASMSLERRIILRAFGAELVL  121 (206)
Q Consensus        62 ~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~-~~~ivvp~~~~~~~~~~~~~~Ga~v~~  121 (206)
                      +...+++|++.+|.+ +|..|..++..|+.+|. +++++..   ++.+++.++.+|++.++
T Consensus       185 ~~~~~~~g~~VlV~G-aG~vG~~a~qla~~~Ga~~Vi~~~~---~~~~~~~~~~lGa~~vi  241 (374)
T 2jhf_A          185 KVAKVTQGSTCAVFG-LGGVGLSVIMGCKAAGAARIIGVDI---NKDKFAKAKEVGATECV  241 (374)
T ss_dssp             TTTCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECS---CGGGHHHHHHTTCSEEE
T ss_pred             hccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcC---CHHHHHHHHHhCCceEe
Confidence            456678887777766 69999999999999998 4544432   34567777889987544

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=83.59  E-value=5.6  Score=31.47  Aligned_cols=72  Identities=11%  Similarity=0.021  Sum_probs=47.2

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCC-CHHHHHHHHHcCCEEEEeCCCCC-hHHHHHHHHHHHHh
Q 028618           70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASM-SLERRIILRAFGAELVLTDPAKG-MKGAVQKAEEILAK  141 (206)
Q Consensus        70 ~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~-~~~~~~~~~~~Ga~v~~~~~~~~-~~~~~~~a~~~~~~  141 (206)
                      +..+|+..+|--|.++|......|.+++++..... .....+.++..|.++..+..|-. .++..+...+..++
T Consensus        33 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~  106 (276)
T 3r1i_A           33 KRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGE  106 (276)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            37889999999999999999999999888766432 33445566777776666544421 33333334444443

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=83.57  E-value=10  Score=28.85  Aligned_cols=56  Identities=11%  Similarity=0.186  Sum_probs=40.0

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCC--HHHHHHHHHcCCEEEEeCCC
Q 028618           70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS--LERRIILRAFGAELVLTDPA  125 (206)
Q Consensus        70 ~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~--~~~~~~~~~~Ga~v~~~~~~  125 (206)
                      +..+|+..+|..|.++|......|.+++++...+..  ....+.++..|.++..+..|
T Consensus         6 ~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D   63 (247)
T 2hq1_A            6 KTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGD   63 (247)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESC
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECC
Confidence            467899999999999999999999988877433322  22334556678777666554

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=83.36  E-value=5.9  Score=30.49  Aligned_cols=56  Identities=11%  Similarity=0.044  Sum_probs=40.7

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCC-HHHHHHHHHcCCEEEEeCCC
Q 028618           70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVLTDPA  125 (206)
Q Consensus        70 ~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~-~~~~~~~~~~Ga~v~~~~~~  125 (206)
                      +..+|+..+|.-|.++|......|.+++++-..... ....+.++..+.++..+..|
T Consensus        10 k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D   66 (253)
T 3qiv_A           10 KVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVD   66 (253)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEcc
Confidence            467899999999999999999999997776543221 22244556678888777655

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=83.30  E-value=11  Score=30.63  Aligned_cols=104  Identities=13%  Similarity=0.066  Sum_probs=56.2

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHCCCcEEEEe-CCCCC-HHHHHHHH-HcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeE
Q 028618           70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITM-PASMS-LERRIILR-AFGAELVLTDPAKGMKGAVQKAEEILAKTPNAY  146 (206)
Q Consensus        70 ~~~vv~aSsGN~g~alA~~a~~~g~~~~ivv-p~~~~-~~~~~~~~-~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~  146 (206)
                      +..+|+..+|--|.++|......|.+++++. ..... ....+.++ ..|.++..+..|-.-.+.+...   ..+  +  
T Consensus        47 k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~---~~~--~--  119 (328)
T 2qhx_A           47 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVS---GAD--G--  119 (328)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------------
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhcccc---ccc--c--
Confidence            3678888889999999999988999877776 32111 11122232 4566665554331100000000   000  1  


Q ss_pred             EcCCCCCCccHHHHHHhHHHHHHhhhCCCCCEEEEccCcc
Q 028618          147 MLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTG  186 (206)
Q Consensus       147 ~~~~~~~~~~~~~g~~t~~~Ei~~q~~~~~d~vv~~vG~G  186 (206)
                           ..+.........+..++.+++ +.+|.+|..+|..
T Consensus       120 -----~~~~~~~~~v~~~~~~~~~~~-g~iD~lVnnAG~~  153 (328)
T 2qhx_A          120 -----SAPVTLFTRCAELVAACYTHW-GRCDVLVNNASSF  153 (328)
T ss_dssp             ------CCBCHHHHHHHHHHHHHHHH-SCCCEEEECCCCC
T ss_pred             -----ccccccHHHHHHHHHHHHHhc-CCCCEEEECCCCC
Confidence                 111111224455566677777 5799999999864

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=83.24  E-value=5.2  Score=30.71  Aligned_cols=72  Identities=17%  Similarity=0.064  Sum_probs=46.3

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCC-HHHHHHHHHcCCEEEEeCCCCC-hHHHHHHHHHHHHh
Q 028618           70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVLTDPAKG-MKGAVQKAEEILAK  141 (206)
Q Consensus        70 ~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~-~~~~~~~~~~Ga~v~~~~~~~~-~~~~~~~a~~~~~~  141 (206)
                      +..+|+..+|--|.++|......|.+++++...... ....+.++..|.++..+..|-. .++..+...+..++
T Consensus         6 k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (247)
T 3lyl_A            6 KVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAE   79 (247)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHT
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            467888889999999999999999998877654322 2234455667877776654432 23333334444443

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=83.19  E-value=4.9  Score=28.00  Aligned_cols=50  Identities=26%  Similarity=0.310  Sum_probs=38.9

Q ss_pred             EEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCC
Q 028618           73 LIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPA  125 (206)
Q Consensus        73 vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~  125 (206)
                      ++....|..|.++|......|.+++++-.   .+.+.+.++..|.+++..+..
T Consensus         9 v~I~G~G~iG~~la~~L~~~g~~V~~id~---~~~~~~~~~~~~~~~~~gd~~   58 (141)
T 3llv_A            9 YIVIGSEAAGVGLVRELTAAGKKVLAVDK---SKEKIELLEDEGFDAVIADPT   58 (141)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTCCEEEEES---CHHHHHHHHHTTCEEEECCTT
T ss_pred             EEEECCCHHHHHHHHHHHHCCCeEEEEEC---CHHHHHHHHHCCCcEEECCCC
Confidence            45556699999999999999999988854   456777777788887765544

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=83.14  E-value=4.1  Score=32.23  Aligned_cols=55  Identities=13%  Similarity=0.150  Sum_probs=39.1

Q ss_pred             eEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCC-C--CH-HHHH---HHHHcCCEEEEeCCC
Q 028618           71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPAS-M--SL-ERRI---ILRAFGAELVLTDPA  125 (206)
Q Consensus        71 ~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~-~--~~-~~~~---~~~~~Ga~v~~~~~~  125 (206)
                      +.+|+..+|..|.+++......|.+++++.... .  .+ .+.+   .+...|++++..+-.
T Consensus         4 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~   65 (307)
T 2gas_A            4 KILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDIN   65 (307)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTT
T ss_pred             EEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCC
Confidence            578889999999999999888899988887653 1  22 3332   334567777766643

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=83.14  E-value=5.9  Score=31.07  Aligned_cols=56  Identities=11%  Similarity=0.196  Sum_probs=41.4

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCC--HHHHHHHHHcCCEEEEeCCC
Q 028618           70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS--LERRIILRAFGAELVLTDPA  125 (206)
Q Consensus        70 ~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~--~~~~~~~~~~Ga~v~~~~~~  125 (206)
                      +..+|+..+|--|.++|......|.++++.......  ....+.++..|.++..+..|
T Consensus        19 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   76 (270)
T 3is3_A           19 KVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKAD   76 (270)
T ss_dssp             CEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcC
Confidence            467888889999999999999999998886654322  23345567788887777654

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=83.13  E-value=5.5  Score=31.04  Aligned_cols=72  Identities=8%  Similarity=0.090  Sum_probs=46.2

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCC--HHHHHHHHHcCCEEEEeCCCCC-hHHHHHHHHHHHHh
Q 028618           70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS--LERRIILRAFGAELVLTDPAKG-MKGAVQKAEEILAK  141 (206)
Q Consensus        70 ~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~--~~~~~~~~~~Ga~v~~~~~~~~-~~~~~~~a~~~~~~  141 (206)
                      +..+|+..+|--|.++|......|.++++.......  ....+.++..|.++..+..|-. .++..+...+..++
T Consensus         9 k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (259)
T 3edm_A            9 RTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADK   83 (259)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            467889999999999999999999998877554432  2334556667776665544421 23333334444444

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=82.92  E-value=6.1  Score=30.69  Aligned_cols=56  Identities=13%  Similarity=0.006  Sum_probs=39.2

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCC-HHHHHHHHHcCCEEEEeCCC
Q 028618           70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVLTDPA  125 (206)
Q Consensus        70 ~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~-~~~~~~~~~~Ga~v~~~~~~  125 (206)
                      +..+|+..+|--|.++|......|.+++++...... ....+.++..|.++..+..|
T Consensus        10 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D   66 (260)
T 2ae2_A           10 CTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCD   66 (260)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcC
Confidence            468899999999999999999999988777543211 11233455568777666544

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=82.92  E-value=7  Score=30.87  Aligned_cols=56  Identities=14%  Similarity=0.049  Sum_probs=41.8

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCC-CCHHHHHHHHHcCCEEEEeCCC
Q 028618           70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPAS-MSLERRIILRAFGAELVLTDPA  125 (206)
Q Consensus        70 ~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~-~~~~~~~~~~~~Ga~v~~~~~~  125 (206)
                      +..+|+..+|--|.++|......|.++++.-... ......+.++..|.++..+..|
T Consensus        34 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D   90 (275)
T 4imr_A           34 RTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGD   90 (275)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEec
Confidence            3678888889999999999999999988776543 3344456667778877766544

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=82.90  E-value=4.3  Score=31.38  Aligned_cols=73  Identities=14%  Similarity=0.206  Sum_probs=47.9

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHCCCcEEEEe-CCCC-CHHHHHHHHHcCCEEEEeCCCCC-hHHHHHHHHHHHHhC
Q 028618           70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITM-PASM-SLERRIILRAFGAELVLTDPAKG-MKGAVQKAEEILAKT  142 (206)
Q Consensus        70 ~~~vv~aSsGN~g~alA~~a~~~g~~~~ivv-p~~~-~~~~~~~~~~~Ga~v~~~~~~~~-~~~~~~~a~~~~~~~  142 (206)
                      +..+|+..+|--|.++|......|.++++.. +... .....+.++..|.++..+..|-. .++..+...+..++.
T Consensus        14 k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   89 (256)
T 3ezl_A           14 RIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAEV   89 (256)
T ss_dssp             EEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHhc
Confidence            4678888888899999999999999988776 3332 23445666777877766654421 333444444555544

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=82.86  E-value=3.8  Score=32.78  Aligned_cols=71  Identities=20%  Similarity=0.102  Sum_probs=40.9

Q ss_pred             CeEEEeeCCCc--hHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHH-HHcCCEEEEeCCCC-ChHHHHHHHHHHHHh
Q 028618           70 ESVLIEPTSGN--TGIGLAFMAAAKQYRLIITMPASMSLERRIIL-RAFGAELVLTDPAK-GMKGAVQKAEEILAK  141 (206)
Q Consensus        70 ~~~vv~aSsGN--~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~-~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~~  141 (206)
                      +..+|+..+|.  -|.++|......|.+++++..........+.+ +..| ++..+..|- +.++..+...+..++
T Consensus        32 k~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~  106 (293)
T 3grk_A           32 KRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELG-AFVAGHCDVADAASIDAVFETLEKK  106 (293)
T ss_dssp             CEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHT-CEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC-CceEEECCCCCHHHHHHHHHHHHHh
Confidence            36788888877  99999999999999977765542222223333 3334 344443332 133334444444444

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=82.84  E-value=4.2  Score=31.62  Aligned_cols=56  Identities=13%  Similarity=0.164  Sum_probs=38.7

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCC---HHHHHHHHHcCCEEEEeCCC
Q 028618           70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS---LERRIILRAFGAELVLTDPA  125 (206)
Q Consensus        70 ~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~---~~~~~~~~~~Ga~v~~~~~~  125 (206)
                      +..+|+..+|--|.++|......|.+++++......   ....+.++..|.++..+..|
T Consensus         3 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D   61 (258)
T 3a28_C            3 KVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLD   61 (258)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEcc
Confidence            367899999999999999998899987777544322   12233455557777666544

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=82.77  E-value=13  Score=29.54  Aligned_cols=103  Identities=13%  Similarity=0.069  Sum_probs=54.6

Q ss_pred             eEEEeeCCCchHHHHHHHHHHCCCcEEEEe-CCCCC-HHHHHHHH-HcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEE
Q 028618           71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITM-PASMS-LERRIILR-AFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYM  147 (206)
Q Consensus        71 ~~vv~aSsGN~g~alA~~a~~~g~~~~ivv-p~~~~-~~~~~~~~-~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~  147 (206)
                      ..+|+..+|--|.++|......|.+++++. ..... ....+.++ ..|.++..+..|-.-.+.....   +.+  +   
T Consensus        11 ~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~---~~~--~---   82 (291)
T 1e7w_A           11 VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVS---GAD--G---   82 (291)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC------------
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCccccccc---ccc--c---
Confidence            678888888899999998888898877765 32111 11122233 4565555554331100000000   000  1   


Q ss_pred             cCCCCCCccHHHHHHhHHHHHHhhhCCCCCEEEEccCcc
Q 028618          148 LQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTG  186 (206)
Q Consensus       148 ~~~~~~~~~~~~g~~t~~~Ei~~q~~~~~d~vv~~vG~G  186 (206)
                          ..+.........+..++.+++ +.+|.+|..+|..
T Consensus        83 ----~~~~~~~~~v~~~~~~~~~~~-g~iD~lvnnAg~~  116 (291)
T 1e7w_A           83 ----SAPVTLFTRCAELVAACYTHW-GRCDVLVNNASSF  116 (291)
T ss_dssp             ----CCCBCHHHHHHHHHHHHHHHH-SCCCEEEECCCCC
T ss_pred             ----ccccchHHHHHHHHHHHHHhc-CCCCEEEECCCCC
Confidence                111111223444555666666 5799999999854

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=82.75  E-value=5.6  Score=31.18  Aligned_cols=56  Identities=18%  Similarity=0.129  Sum_probs=40.9

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCC--HHHHHHHHHcCCEEEEeCCC
Q 028618           70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS--LERRIILRAFGAELVLTDPA  125 (206)
Q Consensus        70 ~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~--~~~~~~~~~~Ga~v~~~~~~  125 (206)
                      +..+|+..+|.-|.++|......|.+++++......  ....+.++..|.++..+..|
T Consensus        30 k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D   87 (271)
T 4iin_A           30 KNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFD   87 (271)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECC
Confidence            467888888999999999999999998887764322  23344566778777766554

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=82.73  E-value=11  Score=29.82  Aligned_cols=56  Identities=13%  Similarity=0.127  Sum_probs=42.2

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCC--------HHHHHHHHHcCCEEEEeCCC
Q 028618           70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS--------LERRIILRAFGAELVLTDPA  125 (206)
Q Consensus        70 ~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~--------~~~~~~~~~~Ga~v~~~~~~  125 (206)
                      +..+|+..+|--|.++|......|.+++++......        ....+.++..|.++..+..|
T Consensus        10 k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   73 (285)
T 3sc4_A           10 KTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGD   73 (285)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECC
Confidence            467888999999999999999999988887655431        23355567778888877655

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=82.47  E-value=6.9  Score=31.61  Aligned_cols=57  Identities=21%  Similarity=0.196  Sum_probs=42.0

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCC-----------CCCHHHHHHHHHcCCEEEEeCCCC
Q 028618           70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPA-----------SMSLERRIILRAFGAELVLTDPAK  126 (206)
Q Consensus        70 ~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~-----------~~~~~~~~~~~~~Ga~v~~~~~~~  126 (206)
                      +..+|+..+|--|.++|......|.+++++...           .......+.++..|.++..+..|-
T Consensus        28 k~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv   95 (322)
T 3qlj_A           28 RVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNV   95 (322)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCT
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCC
Confidence            367888888889999999999999988877533           112334556677898888887653

>4ekn_B Aspartate carbamoyltransferase; atcase, aspartate transcarbamoylase, pyrimidine biosynthesis thermostability, substrate channeling; 2.50A {Methanocaldococcus jannaschii} PDB: 3e2p_A 2rgw_A

Probab=82.32  E-value=4.4  Score=33.22  Aligned_cols=45  Identities=13%  Similarity=0.130  Sum_probs=37.3

Q ss_pred             CchHHHHHHHHHHC-CCcEEEEeCCC--CCHHHHHHHHHcCCEEEEeC
Q 028618           79 GNTGIGLAFMAAAK-QYRLIITMPAS--MSLERRIILRAFGAELVLTD  123 (206)
Q Consensus        79 GN~g~alA~~a~~~-g~~~~ivvp~~--~~~~~~~~~~~~Ga~v~~~~  123 (206)
                      +|.+++++.++.++ |++++++.|+.  .++..++.++..|+++..+.
T Consensus       163 ~rva~Sl~~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~  210 (306)
T 4ekn_B          163 GRTVHSLVYALSLFENVEMYFVSPKELRLPKDIIEDLKAKNIKFYEKE  210 (306)
T ss_dssp             CHHHHHHHHHHHTSSSCEEEEECCGGGCCCHHHHHHHHHTTCCEEEES
T ss_pred             CcHHHHHHHHHHhcCCCEEEEECCcccccCHHHHHHHHHcCCEEEEEc
Confidence            68999999999999 99999999986  45666667777888876654

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=82.31  E-value=6.2  Score=30.74  Aligned_cols=56  Identities=14%  Similarity=0.069  Sum_probs=40.1

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCC-HHHHHHHHHcCCEEEEeCCC
Q 028618           70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVLTDPA  125 (206)
Q Consensus        70 ~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~-~~~~~~~~~~Ga~v~~~~~~  125 (206)
                      +..+|+..+|--|.++|......|.+++++...... ....+.++..|.++..+..|
T Consensus        30 k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D   86 (262)
T 3rkr_A           30 QVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACD   86 (262)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEec
Confidence            367888888999999999999999997776544321 22344556678887777655

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=82.22  E-value=5.5  Score=30.68  Aligned_cols=56  Identities=16%  Similarity=0.081  Sum_probs=39.4

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCC-HHHHHHHHHcCCEEEEeCCC
Q 028618           70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVLTDPA  125 (206)
Q Consensus        70 ~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~-~~~~~~~~~~Ga~v~~~~~~  125 (206)
                      +..+|+..+|.-|.++|......|.+++++...... ....+.++..|.++..+..|
T Consensus        14 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D   70 (260)
T 3awd_A           14 RVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMD   70 (260)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEec
Confidence            368899999999999999999999988777654211 12234455667666665544

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=82.19  E-value=4  Score=32.20  Aligned_cols=56  Identities=13%  Similarity=0.104  Sum_probs=40.4

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCC---------CHH----HHHHHHHcCCEEEEeCCC
Q 028618           70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASM---------SLE----RRIILRAFGAELVLTDPA  125 (206)
Q Consensus        70 ~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~---------~~~----~~~~~~~~Ga~v~~~~~~  125 (206)
                      +..+|+..+|--|.++|......|.+++++-....         ...    ..+.++..|.++..+..|
T Consensus        11 k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   79 (281)
T 3s55_A           11 KTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVD   79 (281)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCC
Confidence            47889999999999999999999999877765321         122    234456778887777654

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=82.18  E-value=9.8  Score=29.26  Aligned_cols=55  Identities=11%  Similarity=0.163  Sum_probs=36.5

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHCCCc-EEEEeCCCCCHHHHHHHHHc--CCEEEEeCCC
Q 028618           70 ESVLIEPTSGNTGIGLAFMAAAKQYR-LIITMPASMSLERRIILRAF--GAELVLTDPA  125 (206)
Q Consensus        70 ~~~vv~aSsGN~g~alA~~a~~~g~~-~~ivvp~~~~~~~~~~~~~~--Ga~v~~~~~~  125 (206)
                      +..+|+..+|--|.++|......|.+ ++++... ......+.++..  +.++..+..|
T Consensus         6 k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~-~~~~~~~~l~~~~~~~~~~~~~~D   63 (254)
T 1sby_A            6 KNVIFVAALGGIGLDTSRELVKRNLKNFVILDRV-ENPTALAELKAINPKVNITFHTYD   63 (254)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESS-CCHHHHHHHHHHCTTSEEEEEECC
T ss_pred             cEEEEECCCChHHHHHHHHHHHCCCcEEEEEecC-chHHHHHHHHHhCCCceEEEEEEe
Confidence            46788888899999999999999997 5555433 333444444433  5566555443

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=82.05  E-value=9.7  Score=31.39  Aligned_cols=59  Identities=19%  Similarity=0.238  Sum_probs=43.5

Q ss_pred             HcCCCC-----CCCeEEEeeCCCchHHHHHHHHHH-CCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeC
Q 028618           62 AKGLIT-----PGESVLIEPTSGNTGIGLAFMAAA-KQYRLIITMPASMSLERRIILRAFGAELVLTD  123 (206)
Q Consensus        62 ~~g~~~-----~~~~~vv~aSsGN~g~alA~~a~~-~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~  123 (206)
                      +...++     +|++.+|.+.+|..|.+.+..|+. .|.+++++.+   ++.+++.++.+|++.++..
T Consensus       160 ~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~---~~~~~~~~~~lGad~vi~~  224 (363)
T 4dvj_A          160 DRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTDLTVIATAS---RPETQEWVKSLGAHHVIDH  224 (363)
T ss_dssp             TTSCTTSCCTTSEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECS---SHHHHHHHHHTTCSEEECT
T ss_pred             HhhCcCcCcCCCCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeC---CHHHHHHHHHcCCCEEEeC
Confidence            444555     666666666689999999999987 5887766643   4578888899999866543

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=82.03  E-value=6.8  Score=30.58  Aligned_cols=73  Identities=12%  Similarity=0.056  Sum_probs=47.0

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCC-CHHHHHHHHHcCCEEEEeCCCCC-hHHHHHHHHHHHHhC
Q 028618           70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASM-SLERRIILRAFGAELVLTDPAKG-MKGAVQKAEEILAKT  142 (206)
Q Consensus        70 ~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~-~~~~~~~~~~~Ga~v~~~~~~~~-~~~~~~~a~~~~~~~  142 (206)
                      +..+|+..+|--|.++|......|.++++...... .....+.++..|.++..+..|-. .++..+...+..++.
T Consensus        12 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   86 (264)
T 3ucx_A           12 KVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAY   86 (264)
T ss_dssp             CEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            47889999999999999999999999877755321 12223455667877777655422 233334444444443

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=82.01  E-value=6.2  Score=31.01  Aligned_cols=56  Identities=20%  Similarity=0.192  Sum_probs=40.8

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCC--CHHHHHHHHHcCCEEEEeCCC
Q 028618           70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASM--SLERRIILRAFGAELVLTDPA  125 (206)
Q Consensus        70 ~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~--~~~~~~~~~~~Ga~v~~~~~~  125 (206)
                      +..+|+..+|--|.++|......|.++++......  .....+.++..|.++..+..|
T Consensus        29 k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   86 (269)
T 4dmm_A           29 RIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKAD   86 (269)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECC
Confidence            36788888899999999999999999887765332  223345566778887776554

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=81.82  E-value=6.1  Score=30.50  Aligned_cols=56  Identities=21%  Similarity=0.093  Sum_probs=38.6

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCC-HHHHHHHHHcCCEEEEeCCC
Q 028618           70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVLTDPA  125 (206)
Q Consensus        70 ~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~-~~~~~~~~~~Ga~v~~~~~~  125 (206)
                      +..+|+..+|.-|.++|......|.+++++...... ....+.++..|.++..+..|
T Consensus         8 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D   64 (247)
T 2jah_A            8 KVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELD   64 (247)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECC
Confidence            468899999999999999999999988777543211 11233445567776665544

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=81.71  E-value=13  Score=28.72  Aligned_cols=71  Identities=11%  Similarity=0.062  Sum_probs=42.5

Q ss_pred             CeEEEeeCCCc--hHHHHHHHHHHCCCcEEEEeCCCCCHHHHH-HHHHcCC---EEEEeCCCCChHHHHHHHHHHHHh
Q 028618           70 ESVLIEPTSGN--TGIGLAFMAAAKQYRLIITMPASMSLERRI-ILRAFGA---ELVLTDPAKGMKGAVQKAEEILAK  141 (206)
Q Consensus        70 ~~~vv~aSsGN--~g~alA~~a~~~g~~~~ivvp~~~~~~~~~-~~~~~Ga---~v~~~~~~~~~~~~~~~a~~~~~~  141 (206)
                      +..+|+..+|.  -|.++|......|.+++++..........+ ..+.++.   .++.++-.. .++..+...+..++
T Consensus         8 k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~   84 (266)
T 3oig_A            8 RNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTN-DAEIETCFASIKEQ   84 (266)
T ss_dssp             CEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSS-SHHHHHHHHHHHHH
T ss_pred             CEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCC-HHHHHHHHHHHHHH
Confidence            46788888877  899999999999999887765543333333 3344443   444445432 23333334444443

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=81.60  E-value=8  Score=30.23  Aligned_cols=56  Identities=20%  Similarity=0.183  Sum_probs=41.1

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCC--HHHHHHHHHcCCEEEEeCCC
Q 028618           70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS--LERRIILRAFGAELVLTDPA  125 (206)
Q Consensus        70 ~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~--~~~~~~~~~~Ga~v~~~~~~  125 (206)
                      +..+|+..+|.-|.++|......|.++++.......  ....+.++..|.++..+..|
T Consensus        27 k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   84 (272)
T 4e3z_A           27 PVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGD   84 (272)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcC
Confidence            367888899999999999999999998776444322  23344566778888877655

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=81.58  E-value=8.3  Score=30.27  Aligned_cols=71  Identities=11%  Similarity=0.101  Sum_probs=46.9

Q ss_pred             eEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCC--HHHHHHHHHcCCEEEEeCCCCC-hHHHHHHHHHHHHh
Q 028618           71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS--LERRIILRAFGAELVLTDPAKG-MKGAVQKAEEILAK  141 (206)
Q Consensus        71 ~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~--~~~~~~~~~~Ga~v~~~~~~~~-~~~~~~~a~~~~~~  141 (206)
                      ..+|+..+|--|.++|......|.++++.......  ....+.++..|.++..+..|-. .++..+...+..++
T Consensus        29 ~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  102 (267)
T 3u5t_A           29 VAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEA  102 (267)
T ss_dssp             EEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            68899999999999999999999998876544332  2334456778887777655432 23333334444444

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=81.44  E-value=6.4  Score=30.98  Aligned_cols=56  Identities=16%  Similarity=0.174  Sum_probs=40.1

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCC-HHHHHHHHHcCCEEEEeCCC
Q 028618           70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVLTDPA  125 (206)
Q Consensus        70 ~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~-~~~~~~~~~~Ga~v~~~~~~  125 (206)
                      +..+|+..+|--|.++|......|.+++++...... ....+.++..|.++..+..|
T Consensus         5 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D   61 (264)
T 3tfo_A            5 KVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLD   61 (264)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcC
Confidence            467888889999999999999999997777544221 22234556678888776544

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=81.33  E-value=7.8  Score=30.51  Aligned_cols=56  Identities=13%  Similarity=0.084  Sum_probs=41.0

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCC--CHHHHHHHHHcCCEEEEeCCC
Q 028618           70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASM--SLERRIILRAFGAELVLTDPA  125 (206)
Q Consensus        70 ~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~--~~~~~~~~~~~Ga~v~~~~~~  125 (206)
                      +..+|+..+|--|.++|......|.++++......  .....+.++..|.++..+..|
T Consensus        32 k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D   89 (271)
T 3v2g_A           32 KTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRAD   89 (271)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECC
Confidence            47889999999999999999999999877754432  223344566778887776554

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=81.31  E-value=6.4  Score=31.89  Aligned_cols=54  Identities=22%  Similarity=0.102  Sum_probs=38.5

Q ss_pred             eEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCC-CCHHHHH---HHHHcCCEEEEeCC
Q 028618           71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPAS-MSLERRI---ILRAFGAELVLTDP  124 (206)
Q Consensus        71 ~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~-~~~~~~~---~~~~~Ga~v~~~~~  124 (206)
                      +.+|+..+|..|.+++......|.+++++.... ..+.+..   .+...|.+++..+-
T Consensus        12 ~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl   69 (346)
T 3i6i_A           12 RVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLI   69 (346)
T ss_dssp             CEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCT
T ss_pred             eEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeec
Confidence            578999999999999999999999999988754 2333333   33344555555543

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=81.26  E-value=6.1  Score=31.63  Aligned_cols=56  Identities=14%  Similarity=0.058  Sum_probs=39.5

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCC-HHHHHHHHHcCCEEEEeCCC
Q 028618           70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVLTDPA  125 (206)
Q Consensus        70 ~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~-~~~~~~~~~~Ga~v~~~~~~  125 (206)
                      +..+|+..+|--|.++|......|.+++++...... ....+.++..|.++..+..|
T Consensus        32 k~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D   88 (301)
T 3tjr_A           32 RAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCD   88 (301)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEcc
Confidence            368899999999999999999999987777554321 22234456667777666544

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=81.19  E-value=6.1  Score=30.96  Aligned_cols=56  Identities=20%  Similarity=0.102  Sum_probs=39.2

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCC-HHHHHHHHHcCCEEEEeCCC
Q 028618           70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVLTDPA  125 (206)
Q Consensus        70 ~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~-~~~~~~~~~~Ga~v~~~~~~  125 (206)
                      +..+|+..+|--|.++|......|.+++++...... ....+.++..|.++..+..|
T Consensus        32 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D   88 (272)
T 1yb1_A           32 EIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVD   88 (272)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEee
Confidence            468899999999999999999999987777654211 12233455667776666544

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=81.09  E-value=7.3  Score=30.36  Aligned_cols=56  Identities=20%  Similarity=0.331  Sum_probs=40.2

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCC--HHHHHHHHHcCCEEEEeCCC
Q 028618           70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS--LERRIILRAFGAELVLTDPA  125 (206)
Q Consensus        70 ~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~--~~~~~~~~~~Ga~v~~~~~~  125 (206)
                      +..+|+..+|--|.++|......|.++++....+..  ....+.++..|.++..+..|
T Consensus         5 k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D   62 (258)
T 3oid_A            5 KCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKAN   62 (258)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECC
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcC
Confidence            467888889999999999999999998886443321  22344556678777776554

>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A

Probab=81.07  E-value=6.3  Score=32.38  Aligned_cols=62  Identities=16%  Similarity=0.177  Sum_probs=42.7

Q ss_pred             HcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCC--CHHHHHHHH----HcCCEEEEeCC
Q 028618           62 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASM--SLERRIILR----AFGAELVLTDP  124 (206)
Q Consensus        62 ~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~--~~~~~~~~~----~~Ga~v~~~~~  124 (206)
                      +.|.+. |.+..+..-.+|.+++++.++.++|++++++.|+.-  ++..++.++    ..|+++..+..
T Consensus       149 ~~g~l~-gl~va~vGD~~rva~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~~~~~~d  216 (315)
T 1pvv_A          149 KKGTIK-GVKVVYVGDGNNVAHSLMIAGTKLGADVVVATPEGYEPDEKVIKWAEQNAAESGGSFELLHD  216 (315)
T ss_dssp             HHSCCT-TCEEEEESCCCHHHHHHHHHHHHTTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEESC
T ss_pred             HhCCcC-CcEEEEECCCcchHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEeC
Confidence            345543 223344444589999999999999999999999963  333333333    78888877653

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=80.85  E-value=13  Score=26.68  Aligned_cols=23  Identities=22%  Similarity=0.247  Sum_probs=13.2

Q ss_pred             HHhHHHHHHhhhCCCCCEEEEccCc
Q 028618          161 YETTGPELWKGSGGRIDALVSGIGT  185 (206)
Q Consensus       161 ~~t~~~Ei~~q~~~~~d~vv~~vG~  185 (206)
                      ...+..++.+++ +. |.+|-+.|+
T Consensus        85 v~~~~~~i~~~~-G~-dVLVnnAgg  107 (157)
T 3gxh_A           85 VEAFFAAMDQHK-GK-DVLVHCLAN  107 (157)
T ss_dssp             HHHHHHHHHHTT-TS-CEEEECSBS
T ss_pred             HHHHHHHHHhcC-CC-CEEEECCCC
Confidence            334444555555 34 888777764

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=80.51  E-value=7.5  Score=29.92  Aligned_cols=56  Identities=18%  Similarity=0.221  Sum_probs=40.8

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCC--CHHHHHHHHHcCCEEEEeCCC
Q 028618           70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASM--SLERRIILRAFGAELVLTDPA  125 (206)
Q Consensus        70 ~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~--~~~~~~~~~~~Ga~v~~~~~~  125 (206)
                      +..+|+..+|--|.++|......|.++++......  .....+.++..|.++..+..|
T Consensus         5 k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   62 (246)
T 3osu_A            5 KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQAN   62 (246)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcc
Confidence            46788888899999999999999999887765432  223344566778877766554

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=80.48  E-value=6.1  Score=32.51  Aligned_cols=56  Identities=18%  Similarity=0.074  Sum_probs=39.3

Q ss_pred             cCCCC-CCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHH-HcCCEEEEe
Q 028618           63 KGLIT-PGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILR-AFGAELVLT  122 (206)
Q Consensus        63 ~g~~~-~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~-~~Ga~v~~~  122 (206)
                      +..+. +|++.+|.+ +|.-|+..+..|+.+|.+++++.+..   .+++.++ .+|++.+..
T Consensus       174 ~~~~~~~g~~VlV~G-aG~vG~~a~qlak~~Ga~Vi~~~~~~---~~~~~~~~~lGa~~vi~  231 (357)
T 2cf5_A          174 HFGLKQPGLRGGILG-LGGVGHMGVKIAKAMGHHVTVISSSN---KKREEALQDLGADDYVI  231 (357)
T ss_dssp             HTSTTSTTCEEEEEC-CSHHHHHHHHHHHHHTCEEEEEESST---THHHHHHTTSCCSCEEE
T ss_pred             hcCCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCeEEEEeCCh---HHHHHHHHHcCCceeec
Confidence            33455 776766665 68899999999999999766665432   4555555 889875443

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=80.46  E-value=15  Score=28.76  Aligned_cols=52  Identities=15%  Similarity=0.185  Sum_probs=35.8

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeC
Q 028618           70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTD  123 (206)
Q Consensus        70 ~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~  123 (206)
                      +..+|+..+|--|.++|......|.+++++-.........  .+.+|.++..+.
T Consensus        12 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~--~~~~~~~~~~~~   63 (271)
T 3tzq_B           12 KVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGA--AASVGRGAVHHV   63 (271)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHH--HHHHCTTCEEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH--HHHhCCCeEEEE
Confidence            4678999999999999999999999988776554443322  233355444443

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=80.45  E-value=3.4  Score=32.72  Aligned_cols=56  Identities=16%  Similarity=0.063  Sum_probs=38.0

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCC-CHHHHHHHHHcCCEEEEeCCC
Q 028618           70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASM-SLERRIILRAFGAELVLTDPA  125 (206)
Q Consensus        70 ~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~-~~~~~~~~~~~Ga~v~~~~~~  125 (206)
                      +..+|+..+|.-|.++|......|.+++++..... .....+.++..|.++..+..|
T Consensus        45 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D  101 (285)
T 2c07_A           45 KVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGD  101 (285)
T ss_dssp             CEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECC
Confidence            46889999999999999999889998877543211 112233455567777666544

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=80.24  E-value=3.9  Score=32.42  Aligned_cols=56  Identities=18%  Similarity=0.236  Sum_probs=40.5

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCC--HHHHHHHHHcCCEEEEeCCC
Q 028618           70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS--LERRIILRAFGAELVLTDPA  125 (206)
Q Consensus        70 ~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~--~~~~~~~~~~Ga~v~~~~~~  125 (206)
                      +..+|+..+|--|.++|......|.+++++...+..  ....+.++..|.++..+..|
T Consensus        30 k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   87 (280)
T 4da9_A           30 PVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRAD   87 (280)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEec
Confidence            367888999999999999999999998887643321  22344566778877776544

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=80.23  E-value=8.8  Score=29.94  Aligned_cols=72  Identities=14%  Similarity=0.075  Sum_probs=46.5

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHH----HHHHHHcCCEEEEeCCCCC-hHHHHHHHHHHHHh
Q 028618           70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLER----RIILRAFGAELVLTDPAKG-MKGAVQKAEEILAK  141 (206)
Q Consensus        70 ~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~----~~~~~~~Ga~v~~~~~~~~-~~~~~~~a~~~~~~  141 (206)
                      +..+|+..+|--|.++|......|.+++++........+    .+.++..|.++..+..|-. .++..+...+..++
T Consensus        12 k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   88 (262)
T 3ksu_A           12 KVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKE   88 (262)
T ss_dssp             CEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            467888888889999999999999998887544333222    3445666888887765532 23333344444444

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=80.23  E-value=4.8  Score=33.25  Aligned_cols=56  Identities=16%  Similarity=0.227  Sum_probs=40.8

Q ss_pred             HcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCC-cEEEEeCCCCCHHHHHHHHHcCCEEEE
Q 028618           62 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQY-RLIITMPASMSLERRIILRAFGAELVL  121 (206)
Q Consensus        62 ~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~-~~~ivvp~~~~~~~~~~~~~~Ga~v~~  121 (206)
                      +...+++|++.+|.+ +|..|+.++..|+.+|. +++++.+   ++.+++.++.+|++.++
T Consensus       184 ~~~~~~~g~~VlV~G-aG~vG~~avqla~~~Ga~~Vi~~~~---~~~~~~~~~~lGa~~vi  240 (373)
T 2fzw_A          184 NTAKLEPGSVCAVFG-LGGVGLAVIMGCKVAGASRIIGVDI---NKDKFARAKEFGATECI  240 (373)
T ss_dssp             TTTCCCTTCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECS---CGGGHHHHHHHTCSEEE
T ss_pred             hhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcC---CHHHHHHHHHcCCceEe
Confidence            456678887777765 69999999999999998 4555432   34567777889987544

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=80.17  E-value=5.9  Score=30.35  Aligned_cols=56  Identities=9%  Similarity=0.074  Sum_probs=39.2

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCC-HHHHHHHHHcCCEEEEeCCC
Q 028618           70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVLTDPA  125 (206)
Q Consensus        70 ~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~-~~~~~~~~~~Ga~v~~~~~~  125 (206)
                      +..+|+..+|.-|.++|......|.+++++...... ....+.++..|.++..+..|
T Consensus        12 ~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D   68 (255)
T 1fmc_A           12 KCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCD   68 (255)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcC
Confidence            467888999999999999999999987777554211 12234455667777666544

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=80.11  E-value=5.5  Score=32.50  Aligned_cols=52  Identities=15%  Similarity=0.128  Sum_probs=38.6

Q ss_pred             CCCCCCeEEEeeCCCchHHHHHHHHHHC--CCcEEEEeCCCCCHHHHHHHHHcCCEEEE
Q 028618           65 LITPGESVLIEPTSGNTGIGLAFMAAAK--QYRLIITMPASMSLERRIILRAFGAELVL  121 (206)
Q Consensus        65 ~~~~~~~~vv~aSsGN~g~alA~~a~~~--g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~  121 (206)
                      .+ +|++.+|.+. |..|+.++..|+.+  |.+++++.   .++.+++.++.+|++.+.
T Consensus       168 ~~-~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~---~~~~~~~~~~~lGa~~vi  221 (344)
T 2h6e_A          168 KF-AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGIS---RSKKHRDFALELGADYVS  221 (344)
T ss_dssp             TC-SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEEC---SCHHHHHHHHHHTCSEEE
T ss_pred             CC-CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEe---CCHHHHHHHHHhCCCEEe
Confidence            35 7766666665 89999999999999  98755543   356778888889986543

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=80.03  E-value=7  Score=30.79  Aligned_cols=56  Identities=16%  Similarity=0.128  Sum_probs=38.7

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCC-HHHHHHHHHcCCEEEEeCCC
Q 028618           70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVLTDPA  125 (206)
Q Consensus        70 ~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~-~~~~~~~~~~Ga~v~~~~~~  125 (206)
                      +..+|+..+|--|.++|......|.+++++...... ....+.++..|.++..+..|
T Consensus        23 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D   79 (277)
T 2rhc_B           23 EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCD   79 (277)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECC
Confidence            368899999999999999999999988777544211 11234455567766655444

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	206
d1z7wa1	320	c.79.1.1 (A:3-322) O-acetylserine sulfhydrylase (C	8e-56
d1jbqa_	355	c.79.1.1 (A:) Cystathionine beta-synthase {Human (	5e-46
d1fcja_	302	c.79.1.1 (A:) O-acetylserine sulfhydrylase (Cystei	9e-45
d1y7la1	310	c.79.1.1 (A:2-311) O-acetylserine sulfhydrylase (C	1e-44
d1ve1a1	302	c.79.1.1 (A:1-302) O-acetylserine sulfhydrylase (C	1e-42
d1o58a_	293	c.79.1.1 (A:) O-acetylserine sulfhydrylase (Cystei	2e-41
d2bhsa1	292	c.79.1.1 (A:2-293) O-acetylserine sulfhydrylase (C	1e-36
d1tdja1	331	c.79.1.1 (A:5-335) Threonine deaminase {Escherichi	5e-29
d1wkva1	382	c.79.1.1 (A:2-383) O-acetylserine sulfhydrylase (C	1e-27
d1v71a1	318	c.79.1.1 (A:6-323) Hypothetical protein C320.14 (S	4e-27
d1tyza_	338	c.79.1.1 (A:) 1-aminocyclopropane-1-carboxylate de	1e-20
d1e5xa_	477	c.79.1.1 (A:) Threonine synthase {Mouse-ear cress	2e-19
d1ve5a1	310	c.79.1.1 (A:2-311) Threonine deaminase {Thermus th	3e-18
d1j0aa_	325	c.79.1.1 (A:) 1-aminocyclopropane-1-carboxylate de	9e-18
d1f2da_	341	c.79.1.1 (A:) 1-aminocyclopropane-1-carboxylate de	2e-17
d1p5ja_	319	c.79.1.1 (A:) L-serine dehydratase {Human (Homo sa	5e-17
d1v8za1	386	c.79.1.1 (A:1-386) Tryptophan synthase, beta-subun	2e-13
d1v7ca_	351	c.79.1.1 (A:) Threonine synthase {Thermus thermoph	4e-13
d1qopb_	390	c.79.1.1 (B:) Tryptophan synthase, beta-subunit {S	4e-12

>d1z7wa1 c.79.1.1 (A:3-322) O-acetylserine sulfhydrylase (Cysteine synthase) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 320

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  177 bits (450), Expect = 8e-56
 Identities = 171/199 (85%), Positives = 183/199 (91%)

Query: 6   SNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGL 65
           S IAKDVTELIGNTPLVYLNN+  GCV R+AAKLEMMEPCSSVKDRIG+SMISDAE KGL
Sbjct: 1   SRIAKDVTELIGNTPLVYLNNVAEGCVGRVAAKLEMMEPCSSVKDRIGFSMISDAEKKGL 60

Query: 66  ITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPA 125
           I PGESVLIEPTSGNTG+GLAF AAAK Y+LIITMPASMS ERRIIL AFG ELVLTDPA
Sbjct: 61  IKPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERRIILLAFGVELVLTDPA 120

Query: 126 KGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGT 185
           KGMKGA+ KAEEILAKTPN YMLQQFENPANPKIHYETTGPE+WKG+GG+ID  VSGIGT
Sbjct: 121 KGMKGAIAKAEEILAKTPNGYMLQQFENPANPKIHYETTGPEIWKGTGGKIDGFVSGIGT 180

Query: 186 GGTITGAGKFLKEKNPNIK 204
           GGTITGAGK+LKE+N N+K
Sbjct: 181 GGTITGAGKYLKEQNANVK 199

>d1jbqa_ c.79.1.1 (A:) Cystathionine beta-synthase {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Cystathionine beta-synthase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  153 bits (387), Expect = 5e-46
 Identities = 90/208 (43%), Positives = 121/208 (58%), Gaps = 6/208 (2%)

Query: 3   VESSNIAKDVTELIGNTPLVYLNNIVN--GCVARIAAKLEMMEPCSSVKDRIGYSMISDA 60
            +S  I  D+ + IG+TP+V +N I    G    + AK E      SVKDRI   MI DA
Sbjct: 29  AKSPKILPDILKKIGDTPMVRINKIGKKFGLKCELLAKCEFFNAGGSVKDRISLRMIEDA 88

Query: 61  EAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV 120
           E  G + P    +IEPTSGNTGIGLA  AA + YR II MP  MS E+  +LRA GAE+V
Sbjct: 89  ERDGTLKP-GDTIIEPTSGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDVLRALGAEIV 147

Query: 121 LTDPAKGM---KGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRID 177
            T         +  V  A  +  + PN+++L Q+ N +NP  HY+TT  E+ +   G++D
Sbjct: 148 RTPTNARFDSPESHVGVAWRLKNEIPNSHILDQYRNASNPLAHYDTTADEILQQCDGKLD 207

Query: 178 ALVSGIGTGGTITGAGKFLKEKNPNIKV 205
            LV+ +GTGGTITG  + LKEK P  ++
Sbjct: 208 MLVASVGTGGTITGIARKLKEKCPGCRI 235

>d1fcja_ c.79.1.1 (A:) O-acetylserine sulfhydrylase (Cysteine synthase) {Salmonella typhimurium [TaxId: 90371]} Length = 302

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Salmonella typhimurium [TaxId: 90371]

 Score =  148 bits (375), Expect = 9e-45
 Identities = 108/198 (54%), Positives = 144/198 (72%), Gaps = 5/198 (2%)

Query: 6   SNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGL 65
           S I +D +  IG+TPLV LN I N    RI AK+E   P  SVK RIG +MI DAE +G+
Sbjct: 1   SKIYEDNSLTIGHTPLVRLNRIGN---GRILAKVESRNPSFSVKCRIGANMIWDAEKRGV 57

Query: 66  ITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPA 125
           + PG   L+EPT+GNTGI LA++AAA+ Y+L +TMP +MS+ERR +L+A GA LVLT+ A
Sbjct: 58  LKPGV-ELVEPTNGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLKALGANLVLTEGA 116

Query: 126 KGMKGAVQKAEEILAKT-PNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIG 184
           KGMKGA+QKAEEI+A       +LQQF NPANP+IH +TTGPE+W+ + G++D  +SG+G
Sbjct: 117 KGMKGAIQKAEEIVASDPQKYLLLQQFSNPANPEIHEKTTGPEIWEDTDGQVDVFISGVG 176

Query: 185 TGGTITGAGKFLKEKNPN 202
           TGGT+TG  +++K     
Sbjct: 177 TGGTLTGVTRYIKGTKGK 194

>d1y7la1 c.79.1.1 (A:2-311) O-acetylserine sulfhydrylase (Cysteine synthase) {Haemophilus influenzae [TaxId: 727]} Length = 310

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Haemophilus influenzae [TaxId: 727]

 Score =  148 bits (375), Expect = 1e-44
 Identities = 98/196 (50%), Positives = 134/196 (68%), Gaps = 4/196 (2%)

Query: 8   IAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLIT 67
           I  D +  IGNTPLV L +  +     +  K+E   P  SVK RIG +M+  AE  G +T
Sbjct: 2   IYADNSYSIGNTPLVRLKHFGHNG--NVVVKIEGRNPSYSVKCRIGANMVWQAEKDGTLT 59

Query: 68  PGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKG 127
            G   +++ TSGNTGI LA++AAA+ Y++ +TMP +MSLER+ +L   G  LVLT+ AKG
Sbjct: 60  KG-KEIVDATSGNTGIALAYVAAARGYKITLTMPETMSLERKRLLCGLGVNLVLTEGAKG 118

Query: 128 MKGAVQKAEEILAKTPNA-YMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTG 186
           MKGA+ KAEEI+A  P+   ML+QFENPANP+IH ETTGPE+WK + G++D +V+G+GTG
Sbjct: 119 MKGAIAKAEEIVASDPSRYVMLKQFENPANPQIHRETTGPEIWKDTDGKVDVVVAGVGTG 178

Query: 187 GTITGAGKFLKEKNPN 202
           G+ITG  + +K     
Sbjct: 179 GSITGISRAIKLDFGK 194

>d1ve1a1 c.79.1.1 (A:1-302) O-acetylserine sulfhydrylase (Cysteine synthase) {Thermus thermophilus [TaxId: 274]} Length = 302

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Thermus thermophilus [TaxId: 274]

 Score =  143 bits (361), Expect = 1e-42
 Identities = 106/195 (54%), Positives = 140/195 (71%), Gaps = 2/195 (1%)

Query: 12  VTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPG-E 70
           V   IG TP+V L  +V   +A +  KLE + P  S+KDR  + MI DAE +G++ PG  
Sbjct: 3   VEGAIGKTPVVRLAKVVEPDMAEVWVKLEGLNPGGSIKDRPAWYMIKDAEERGILRPGSG 62

Query: 71  SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKG 130
            V++EPTSGNTGIGLA +AA++ YRLI+TMPA MS ER+ +L+AFGAELVLTDP + M  
Sbjct: 63  QVIVEPTSGNTGIGLAMIAASRGYRLILTMPAQMSEERKRVLKAFGAELVLTDPERRMLA 122

Query: 131 AVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTIT 190
           A ++A  +  +   A+M  QF+NPAN + HYETTGPEL++   GRIDA V G GTGGTIT
Sbjct: 123 AREEALRL-KEELGAFMPDQFKNPANVRAHYETTGPELYEALEGRIDAFVYGSGTGGTIT 181

Query: 191 GAGKFLKEKNPNIKV 205
           G G++LKE+ P++KV
Sbjct: 182 GVGRYLKERIPHVKV 196

>d1o58a_ c.79.1.1 (A:) O-acetylserine sulfhydrylase (Cysteine synthase) {Thermotoga maritima [TaxId: 2336]} Length = 293

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Thermotoga maritima [TaxId: 2336]

 Score =  140 bits (353), Expect = 2e-41
 Identities = 96/193 (49%), Positives = 127/193 (65%), Gaps = 8/193 (4%)

Query: 10  KDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPG 69
             +  LIG+TP+V L++I     +RI  KLE   P  SVKDR    MI DAE +GL+  G
Sbjct: 2   HMMERLIGSTPIVRLDSID----SRIFLKLEKNNPGGSVKDRPALFMILDAEKRGLLKNG 57

Query: 70  ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMK 129
              ++EPTSGN GI +A + A + +R+I+TMP +MS+ERR +L+  GAELVLT    GMK
Sbjct: 58  ---IVEPTSGNMGIAIAMIGAKRGHRVILTMPETMSVERRKVLKMLGAELVLTPGELGMK 114

Query: 130 GAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTI 189
           GAV+KA E +++   A+ML QFENP N   H  TTGPE+ K    +IDA V+G+GTGGTI
Sbjct: 115 GAVEKALE-ISRETGAHMLNQFENPYNVYSHQFTTGPEILKQMDYQIDAFVAGVGTGGTI 173

Query: 190 TGAGKFLKEKNPN 202
           +G G+ LK    N
Sbjct: 174 SGVGRVLKGFFGN 186

>d2bhsa1 c.79.1.1 (A:2-293) O-acetylserine sulfhydrylase (Cysteine synthase) {Escherichia coli, isoform B (CysM) [TaxId: 562]} Length = 292

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Escherichia coli, isoform B (CysM) [TaxId: 562]

 Score =  127 bits (320), Expect = 1e-36
 Identities = 91/194 (46%), Positives = 123/194 (63%), Gaps = 2/194 (1%)

Query: 12  VTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGES 71
           + + IGNTPLV L  +     + +  KLE   P  SVKDR   SMI +AE +G I PG+ 
Sbjct: 3   LEQTIGNTPLVKLQRMGPDNGSEVWLKLEGNNPAGSVKDRAALSMIVEAEKRGEIKPGDV 62

Query: 72  VLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGA 131
           + IE TSGNTGI LA +AA K YR+ + MP +MS ERR  +RA+GAEL+L    +GM+GA
Sbjct: 63  L-IEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERRAAMRAYGAELILVTKEQGMEGA 121

Query: 132 VQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITG 191
            +     +A      +L QF NP NP  HY TTGPE+W+ +GGRI   VS +GT GTITG
Sbjct: 122 -RDLALEMANRGEGKLLDQFNNPDNPYAHYTTTGPEIWQQTGGRITHFVSSMGTTGTITG 180

Query: 192 AGKFLKEKNPNIKV 205
             +F++E++  + +
Sbjct: 181 VSRFMREQSKPVTI 194

>d1tdja1 c.79.1.1 (A:5-335) Threonine deaminase {Escherichia coli [TaxId: 562]} Length = 331

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Threonine deaminase
species: Escherichia coli [TaxId: 562]

 Score =  108 bits (270), Expect = 5e-29
 Identities = 45/194 (23%), Positives = 77/194 (39%), Gaps = 9/194 (4%)

Query: 12  VTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGES 71
           V E    TPL  +  + +     I  K E  +P  S K R  Y+M++    +        
Sbjct: 21  VYEAAQVTPLQKMEKLSSRLDNVILVKREDRQPVHSFKLRGAYAMMAGLTEEQ----KAH 76

Query: 72  VLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGA 131
            +I  ++GN   G+AF +A    + +I MP + +  +   +R FG E++L         A
Sbjct: 77  GVITASAGNHAQGVAFSSARLGVKALIVMPTATADIKVDAVRGFGGEVLLHGANFDEAKA 136

Query: 132 VQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITG 191
                  L++      +  F++P    I  + T           +D +   +G GG   G
Sbjct: 137 KA---IELSQQQGFTWVPPFDHP--MVIAGQGTLALELLQQDAHLDRVFVPVGGGGLAAG 191

Query: 192 AGKFLKEKNPNIKV 205
               +K+  P IKV
Sbjct: 192 VAVLIKQLMPQIKV 205

>d1wkva1 c.79.1.1 (A:2-383) O-acetylserine sulfhydrylase (Cysteine synthase) {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 382

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Archaeon Aeropyrum pernix [TaxId: 56636]

 Score =  105 bits (263), Expect = 1e-27
 Identities = 53/201 (26%), Positives = 92/201 (45%), Gaps = 11/201 (5%)

Query: 11  DVTELIGNTPLVYLNNIV-NGCVARIAAKLEMMEPCS-SVKDRIGYSMISDAEAKGLITP 68
           D  E    TPLV     + NG   R+  KLE   P S SVKDR    +IS    +  +  
Sbjct: 88  DFFERGKPTPLVRSRLQLPNGV--RVWLKLEWYNPFSLSVKDRPAVEIISRLSRR--VEK 143

Query: 69  GESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGM 128
           G S++ + TS N G+ L+ +A    YR  + +P +     +++ R  GA++++   A   
Sbjct: 144 G-SLVADATSSNFGVALSAVARLYGYRARVYLPGAAEEFGKLLPRLLGAQVIVDPEAPST 202

Query: 129 KGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWK---GSGGRIDALVSGIGT 185
              + +  +  +K      + QF N AN + H   T  E++      G  +  +   +GT
Sbjct: 203 VHLLPRVMKD-SKNEGFVHVNQFYNDANFEAHMRGTAREIFVQSRRGGLALRGVAGSLGT 261

Query: 186 GGTITGAGKFLKEKNPNIKVR 206
            G ++ A  +L+  +P+I+  
Sbjct: 262 SGHMSAAAFYLQSVDPSIRAV 282

>d1v71a1 c.79.1.1 (A:6-323) Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c) {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 318

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c)
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score =  102 bits (255), Expect = 4e-27
 Identities = 36/197 (18%), Positives = 82/197 (41%), Gaps = 9/197 (4%)

Query: 9   AKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITP 68
           ++ + +    TP++  + +    VA +  K E  +   + K R   + +S          
Sbjct: 12  SERIKKFANKTPVLTSSTVNKEFVAEVFFKCENFQKMGAFKFRGALNALSQLNEA----Q 67

Query: 69  GESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGM 128
            ++ ++  +SGN    +A  A        I MP      +    + +G ++++ D  K  
Sbjct: 68  RKAGVLTFSSGNHAQAIALSAKILGIPAKIIMPLDAPEAKVAATKGYGGQVIMYDRYKDD 127

Query: 129 KGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGT 188
           +  + K    +++     ++  +++P +      T   EL++   G +DAL   +G GG 
Sbjct: 128 REKMAKE---ISEREGLTIIPPYDHP-HVLAGQGTAAKELFE-EVGPLDALFVCLGGGGL 182

Query: 189 ITGAGKFLKEKNPNIKV 205
           ++G+    +   PN +V
Sbjct: 183 LSGSALAARHFAPNCEV 199

>d1tyza_ c.79.1.1 (A:) 1-aminocyclopropane-1-carboxylate deaminase {Pseudomonas sp., strain ACP [TaxId: 306]} Length = 338

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: 1-aminocyclopropane-1-carboxylate deaminase
species: Pseudomonas sp., strain ACP [TaxId: 306]

 Score = 85.9 bits (211), Expect = 1e-20
 Identities = 35/213 (16%), Positives = 60/213 (28%), Gaps = 23/213 (10%)

Query: 12  VTELIGNTPLVYLNNIVN--GCVARIAAKLEMMEPCSSV---KDRIGYSMISDAEAKGLI 66
                G TP+  L  +    G    + AK E      +    K R    +I +A A+G  
Sbjct: 9   YPLTFGPTPIQPLARLSKHLGGKVHLYAKREDCNSGLAFGGNKTRKLEYLIPEALAQGCD 68

Query: 67  TPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAEL------- 119
           T    V I     N    +A +AA    + ++     ++    +  R    ++       
Sbjct: 69  TL---VSIGGIQSNQTRQVAAVAAHLGMKCVLVQENWVNYSDAVYDRVGNIQMSRILGAD 125

Query: 120 ---VLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELW-----KG 171
              V      G + + + A E +                +P       G           
Sbjct: 126 VRLVPDGFDIGFRRSWEDALESVRAAGGKPYAIPAGCSDHPLGGLGFVGFAEEVRAQEAE 185

Query: 172 SGGRIDALVSGIGTGGTITGAGKFLKEKNPNIK 204
            G + D +V    TG T  G            +
Sbjct: 186 LGFKFDYVVVCSVTGSTQAGMVVGFAADGRADR 218

>d1e5xa_ c.79.1.1 (A:) Threonine synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 477

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Threonine synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 83.1 bits (204), Expect = 2e-19
 Identities = 28/193 (14%), Positives = 56/193 (29%), Gaps = 5/193 (2%)

Query: 12  VTELIGNTPLVYLNNIVN--GCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPG 69
           V+   GN+ L +          +  +  K   +    S KD     ++S       +   
Sbjct: 115 VSAFEGNSNLFWAERFGKQFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMKRP 174

Query: 70  ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMK 129
              +   ++G+T   L+   A+     I+ +PA+       +++       +        
Sbjct: 175 VVGVGCASTGDTSAALSAYCASAGIPSIVFLPANKI-SMAQLVQPIANGAFVLSIDTDFD 233

Query: 130 GAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTI 189
           G ++   EI         L    N    +         L +      D ++   G  G I
Sbjct: 234 GCMKLIREI--TAELPIYLANSLNSLRLEGQKTAAIEILQQFDWQVPDWVIVPGGNLGNI 291

Query: 190 TGAGKFLKEKNPN 202
               K  K     
Sbjct: 292 YAFYKGFKMCQEL 304

>d1ve5a1 c.79.1.1 (A:2-311) Threonine deaminase {Thermus thermophilus [TaxId: 274]} Length = 310

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Threonine deaminase
species: Thermus thermophilus [TaxId: 274]

 Score = 78.9 bits (193), Expect = 3e-18
 Identities = 40/197 (20%), Positives = 73/197 (37%), Gaps = 12/197 (6%)

Query: 9   AKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITP 68
            + +      TPL+    +      R+  K E ++   S K R   S     E       
Sbjct: 10  FRRIAPYTHRTPLLTSRLLDGLLGKRLLLKAEHLQKTGSFKARGALSKALALE------- 62

Query: 69  GESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGM 128
               L+  +SGN   G+A+ A     + ++ MP   S  ++   RA+GAE+V        
Sbjct: 63  NPKGLLAVSSGNHAQGVAYAAQVLGVKALVVMPEDASPYKKACARAYGAEVVDRGVTAKN 122

Query: 129 KGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELW--KGSGGRIDALVSGIGTG 186
           +  V +A +   +     ++  F++P             L      G    A+++ +G G
Sbjct: 123 REEVARALQ---EETGYALIHPFDDPLVIAGQGTAGLELLAQAGRMGVFPGAVLAPVGGG 179

Query: 187 GTITGAGKFLKEKNPNI 203
           G + G    +K  +P  
Sbjct: 180 GLLAGLATAVKALSPTT 196

>d1j0aa_ c.79.1.1 (A:) 1-aminocyclopropane-1-carboxylate deaminase {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 325

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: 1-aminocyclopropane-1-carboxylate deaminase
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

 Score = 77.8 bits (190), Expect = 9e-18
 Identities = 39/197 (19%), Positives = 66/197 (33%), Gaps = 9/197 (4%)

Query: 12  VTELIGNTPLVYLNNIVNGCVARIAAKLEMM--EPCSSVKDRIGYSMISDAEAKGLITPG 69
           V  +   TP+ YL NI     A +  K + +        K R    ++ DA +KG     
Sbjct: 15  VELIPWETPIQYLPNISREIGADVYIKRDDLTGLGIGGNKIRKLEYLLGDALSKGADVV- 73

Query: 70  ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMK 129
             + +     N        A       I+ +     L+   +L            AK   
Sbjct: 74  --ITVGAVHSNHAFVTGLAAKKLGLDAILVLRGKEELKGNYLLDKIMGIETRVYDAKDSF 131

Query: 130 GAVQKAEEI----LAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGT 185
             ++ AEEI      +    Y++          + Y     E+   S  + D++V   G+
Sbjct: 132 ELMKYAEEIAEELKREGRKPYVIPPGGASPIGTLGYVRAVGEIATQSEVKFDSIVVAAGS 191

Query: 186 GGTITGAGKFLKEKNPN 202
           GGT+ G    L   N +
Sbjct: 192 GGTLAGLSLGLSILNED 208

>d1f2da_ c.79.1.1 (A:) 1-aminocyclopropane-1-carboxylate deaminase {Yeast (Hansenula saturnus) [TaxId: 4906]} Length = 341

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: 1-aminocyclopropane-1-carboxylate deaminase
species: Yeast (Hansenula saturnus) [TaxId: 4906]

 Score = 77.0 bits (188), Expect = 2e-17
 Identities = 28/214 (13%), Positives = 53/214 (24%), Gaps = 26/214 (12%)

Query: 12  VTELIGNTPLVYLNNIVN--GCVARIAAKLEMMEPCSSV---KDRIGYSMISDAEAKGLI 66
                G +P+  LN +    G    + AK E      +    K R    ++ D       
Sbjct: 9   YPLTFGPSPISNLNRLSQHLGSKVNVYAKREDCNSGLAFGGNKLRKLEYIVPDIVEGDYT 68

Query: 67  TPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAK 126
                V I     N    +A +AA    + ++     + +             +      
Sbjct: 69  HL---VSIGGRQSNQTRMVAALAAKLGKKCVLIQEDWVPIPEAEKDVYNRVGNIELSRIM 125

Query: 127 G-------------MKGAVQKAEEILAKTPNAYMLQQFENPANPKIH-----YETTGPEL 168
           G             M+ +   A + L    +           +         +       
Sbjct: 126 GADVRVIEDGFDIGMRKSFANALQELEDAGHKPYPIPAGCSEHKYGGLGFVGFADEVINQ 185

Query: 169 WKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPN 202
               G + D +V    TG T  G    + +    
Sbjct: 186 EVELGIKFDKIVVCCVTGSTTAGILAGMAQYGRQ 219

>d1p5ja_ c.79.1.1 (A:) L-serine dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 319

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: L-serine dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.6 bits (184), Expect = 5e-17
 Identities = 28/191 (14%), Positives = 55/191 (28%), Gaps = 7/191 (3%)

Query: 15  LIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLI 74
           L   TP+     +       +  K++  +P  S K R           +G         +
Sbjct: 4   LHVKTPIRDSMALSKMAGTSVYLKMDSAQPSGSFKIRGIGHFCKRWAKQGCAH-----FV 58

Query: 75  EPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQK 134
             ++GN G+  A+ A        I +P +        L+  GA   +           + 
Sbjct: 59  CSSAGNAGMAAAYAARQLGVPATIVVPGTTPALTIERLKNEGATCKVVGELLDEAF--EL 116

Query: 135 AEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITGAGK 194
           A+ +    P    +  F++P   + H                   +S  G G        
Sbjct: 117 AKALAKNNPGWVYIPPFDDPLIWEGHASIVKELKETLWEKPGAIALSVGGGGLLCGVVQG 176

Query: 195 FLKEKNPNIKV 205
             +    ++ V
Sbjct: 177 LQECGWGDVPV 187

>d1v8za1 c.79.1.1 (A:1-386) Tryptophan synthase, beta-subunit {Archaeon Pyrococcus furiosus [TaxId: 2261]} Length = 386

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Tryptophan synthase, beta-subunit
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

 Score = 66.0 bits (160), Expect = 2e-13
 Identities = 32/201 (15%), Positives = 66/201 (32%), Gaps = 18/201 (8%)

Query: 19  TPLVYLNNIVNGC-VARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPT 77
           TPL Y   +      A+I  K E +    + K          A+  G       ++ E  
Sbjct: 51  TPLYYAKRLTEKIGGAKIYLKREDLVHGGAHKTNNAIGQALLAKFMGKTR----LIAETG 106

Query: 78  SGNTGIGLAFMAAAKQYRLIITMPA---SMSLERRIILRAFGAELVLTDP-AKGMKGAVQ 133
           +G  G+  A   A    ++ I M A            ++  GA ++  +  ++ +K A+ 
Sbjct: 107 AGQHGVATAMAGALLGMKVDIYMGAEDVERQKMNVFRMKLLGANVIPVNSGSRTLKDAIN 166

Query: 134 KAEEILAKTP------NAYMLQQFENPANPKIHYETTGPEL---WKGSGGRIDALVSGIG 184
           +A      T          ++     P   +      G E       + G++  ++    
Sbjct: 167 EALRDWVATFEYTHYLIGSVVGPHPYPTIVRDFQSVIGREAKAQILEAEGQLPDVIVACV 226

Query: 185 TGGTITGAGKFLKEKNPNIKV 205
            GG+      +    +  +K+
Sbjct: 227 GGGSNAMGIFYPFVNDKKVKL 247

>d1v7ca_ c.79.1.1 (A:) Threonine synthase {Thermus thermophilus [TaxId: 274]} Length = 351

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Threonine synthase
species: Thermus thermophilus [TaxId: 274]

 Score = 64.7 bits (156), Expect = 4e-13
 Identities = 36/197 (18%), Positives = 59/197 (29%), Gaps = 11/197 (5%)

Query: 12  VTELIGNTPLVYLNNIV--NGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPG 69
           ++ L G+TPL+ L           R+ AK E + P  S KDR     +S A   G     
Sbjct: 22  ISLLEGSTPLIPLKGPEEARKKGIRLYAKYEGLNPTGSFKDRGMTLAVSKAVEGGAQAV- 80

Query: 70  ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMK 129
                  ++GNT    A  AA      I+ +PA      ++         ++        
Sbjct: 81  ----ACASTGNTAASAAAYAARAGILAIVVLPAGYVALGKVAQSLVHGARIVQVEGNFDD 136

Query: 130 GAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTI 189
                 +          +        +     +T   E+    G         +G  G I
Sbjct: 137 ALRLTQKLT----EAFPVALVNSVNPHRLEGQKTLAFEVVDELGDAPHYHALPVGNAGNI 192

Query: 190 TGAGKFLKEKNPNIKVR 206
           T      K  +   K +
Sbjct: 193 TAHWMGYKAYHALGKAK 209

>d1qopb_ c.79.1.1 (B:) Tryptophan synthase, beta-subunit {Salmonella typhimurium [TaxId: 90371]} Length = 390

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Tryptophan synthase, beta-subunit
species: Salmonella typhimurium [TaxId: 90371]

 Score = 61.8 bits (149), Expect = 4e-12
 Identities = 34/190 (17%), Positives = 55/190 (28%), Gaps = 18/190 (9%)

Query: 19  TPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTS 78
           T L    NI  G    +  K E +    + K          A+  G          E  +
Sbjct: 56  TALTKCQNITAGTRTTLYLKREDLLHGGAHKTNQVLGQALLAKRMGKSEII----AETGA 111

Query: 79  GNTGIGLAFMAAAKQYRLIITMPASM---SLERRIILRAFGAELVLTDP-AKGMKGAVQK 134
           G  G+  A  +A    +  I M A            +R  GAE++     +  +K A  +
Sbjct: 112 GQHGVASALASALLGLKCRIYMGAKDVERQSPNVFRMRLMGAEVIPVHSGSATLKDACNE 171

Query: 135 AEEILAKTP------NAYMLQQFENPANPKIHYETTGPELW----KGSGGRIDALVSGIG 184
           A    + +                 P   +      G E         G   DA+++ +G
Sbjct: 172 ALRDWSGSYETAHYMLGTAAGPHPYPTIVREFQRMIGEETKAQILDKEGRLPDAVIACVG 231

Query: 185 TGGTITGAGK 194
            G    G   
Sbjct: 232 GGSNAIGMFA 241

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	206
d1z7wa1	320	O-acetylserine sulfhydrylase (Cysteine synthase) {	100.0
d2bhsa1	292	O-acetylserine sulfhydrylase (Cysteine synthase) {	100.0
d1ve1a1	302	O-acetylserine sulfhydrylase (Cysteine synthase) {	100.0
d1jbqa_	355	Cystathionine beta-synthase {Human (Homo sapiens)	100.0
d1o58a_	293	O-acetylserine sulfhydrylase (Cysteine synthase) {	100.0
d1v71a1	318	Hypothetical protein C320.14 (SPCC320.14, SPCC330.	100.0
d1y7la1	310	O-acetylserine sulfhydrylase (Cysteine synthase) {	100.0
d1p5ja_	319	L-serine dehydratase {Human (Homo sapiens) [TaxId:	100.0
d1wkva1	382	O-acetylserine sulfhydrylase (Cysteine synthase) {	100.0
d1tdja1	331	Threonine deaminase {Escherichia coli [TaxId: 562]	100.0
d1fcja_	302	O-acetylserine sulfhydrylase (Cysteine synthase) {	100.0
d1ve5a1	310	Threonine deaminase {Thermus thermophilus [TaxId:	100.0
d1v7ca_	351	Threonine synthase {Thermus thermophilus [TaxId: 2	100.0
d1e5xa_	477	Threonine synthase {Mouse-ear cress (Arabidopsis t	100.0
d1v8za1	386	Tryptophan synthase, beta-subunit {Archaeon Pyroco	100.0
d1qopb_	390	Tryptophan synthase, beta-subunit {Salmonella typh	100.0
d1j0aa_	325	1-aminocyclopropane-1-carboxylate deaminase {Archa	100.0
d1tyza_	338	1-aminocyclopropane-1-carboxylate deaminase {Pseud	100.0
d1f2da_	341	1-aminocyclopropane-1-carboxylate deaminase {Yeast	99.97
d1vb3a1	428	Threonine synthase {Escherichia coli [TaxId: 562]}	99.76
d1kl7a_	511	Threonine synthase {Baker's yeast (Saccharomyces c	99.07
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	96.76
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	96.66
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	96.61
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	96.25
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	96.19
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	96.08
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	96.03
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	95.97
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	95.71
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	95.68
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	95.67
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	95.41
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	95.25
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	95.23
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	95.19
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	95.1
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	95.02
d1vp8a_	190	Hypothetical protein AF0103 {Archaeoglobus fulgidu	94.87
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	94.46
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	94.34
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	94.25
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	94.17
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	94.1
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	94.08
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	93.95
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	93.49
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	93.4
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	93.29
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	92.84
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	92.75
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	92.47
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	92.45
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	92.36
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	92.24
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	91.72
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	91.7
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	91.6
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	91.43
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	90.9
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	90.75
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	90.1
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	89.88
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	89.79
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	89.67
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	89.57
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	89.38
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	89.28
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	89.28
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	89.14
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	89.12
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	89.11
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	89.11
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	89.04
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	89.0
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	88.82
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	88.68
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	88.67
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	88.44
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	88.38
d1t57a_	186	Hypothetical protein MTH1675 {Methanobacterium the	88.36
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	88.26
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	87.77
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	87.52
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	87.34
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	87.09
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	86.63
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	85.95
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	85.91
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	85.56
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	85.09
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	84.88
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	84.54
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	84.4
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	83.11
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	82.74
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	82.7
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	82.11
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	82.03
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	81.94
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	81.8
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	81.68
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	81.55
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	81.33
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	80.17

>d1z7wa1 c.79.1.1 (A:3-322) O-acetylserine sulfhydrylase (Cysteine synthase) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=9.5e-52  Score=347.09  Aligned_cols=200  Identities=85%  Similarity=1.301  Sum_probs=184.6

Q ss_pred             chhhhhhccccCCcceecccccCCCCceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHH
Q 028618            7 NIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLA   86 (206)
Q Consensus         7 ~~~~~i~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~alA   86 (206)
                      +|.++|.+++|+|||+++++|++.+|++||+|+|++|||||||+|++.+++.+|+++|.++++...+|++|+||||.|+|
T Consensus         2 ~i~~~i~~~iG~TPLv~~~~l~~~~g~~i~~K~E~~nptGSfKdRgA~~~i~~a~~~g~~~~~~~~vv~aSsGN~g~a~A   81 (320)
T d1z7wa1           2 RIAKDVTELIGNTPLVYLNNVAEGCVGRVAAKLEMMEPCSSVKDRIGFSMISDAEKKGLIKPGESVLIEPTSGNTGVGLA   81 (320)
T ss_dssp             CCCSSGGGGSSCCCEEECCGGGTTCSSEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTSCCTTTCEEEEECSSHHHHHHH
T ss_pred             chhhhhhhhcCCCCeEECCCcccccCCEEEEEeCCCCCccCcHHHHHHHHHHHHHHcCCCCCCCceEEeeCCchHHHHHH
Confidence            56788999999999999999999999999999999999999999999999999999998877778999999999999999


Q ss_pred             HHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHHH
Q 028618           87 FMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGP  166 (206)
Q Consensus        87 ~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~  166 (206)
                      ++|+.+|++|++|+|+++++.|+++++.+||+|+.++...+..+....+.+...+.++++|+++++|+.++..||.|++.
T Consensus        82 ~~a~~~g~~~~iv~p~~~~~~k~~~i~~~Ga~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~g~~t~~~  161 (320)
T d1z7wa1          82 FTAAAKGYKLIITMPASMSTERRIILLAFGVELVLTDPAKGMKGAIAKAEEILAKTPNGYMLQQFENPANPKIHYETTGP  161 (320)
T ss_dssp             HHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHCTTEEECCTTTCTHHHHHHHHTHHH
T ss_pred             HHHHhhccceEEeehhhhhhhhhhhhhccCcceEEeeccccccccchhHHHHHHhCCCceecccccccchHHHhhhhHHH
Confidence            99999999999999999999999999999999999987643344455555566667799999999999998899999999


Q ss_pred             HHHhhhCCCCCEEEEccCcchHHHHHHHHHHhcCCCCeEC
Q 028618          167 ELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKVR  206 (206)
Q Consensus       167 Ei~~q~~~~~d~vv~~vG~Gg~~aGi~~~~k~~~p~~~vi  206 (206)
                      ||++|+.++||+||+|+|+||+++|++.+|+..+|++++|
T Consensus       162 EI~~q~~~~~D~vv~~vGgGg~~~Gi~~~~k~~~~~~~~i  201 (320)
T d1z7wa1         162 EIWKGTGGKIDGFVSGIGTGGTITGAGKYLKEQNANVKLY  201 (320)
T ss_dssp             HHHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEE
T ss_pred             HHHHhccCCCCEEEeCCCCCcccchhhhhhhhhhcceeee
Confidence            9999998889999999999999999999999999999985

>d2bhsa1 c.79.1.1 (A:2-293) O-acetylserine sulfhydrylase (Cysteine synthase) {Escherichia coli, isoform B (CysM) [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Escherichia coli, isoform B (CysM) [TaxId: 562]

Probab=100.00  E-value=1.9e-50  Score=334.76  Aligned_cols=194  Identities=48%  Similarity=0.776  Sum_probs=179.9

Q ss_pred             hhhccccCCcceecccccCCCCceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHHH
Q 028618           11 DVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAA   90 (206)
Q Consensus        11 ~i~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~alA~~a~   90 (206)
                      .|.+.||+|||+++++|++.+|++||+|+|++|||||||+|++.+++..|.++|.+.++ .+++++|+||||+|+|++|+
T Consensus         2 ~i~~~IG~TPL~~~~~l~~~~g~~iy~K~E~~~ptGSfK~Rga~~~i~~a~~~g~~~~~-~~vv~aSsGN~g~a~A~~a~   80 (292)
T d2bhsa1           2 TLEQTIGNTPLVKLQRMGPDNGSEVWLKLEGNNPAGSVKDRAALSMIVEAEKRGEIKPG-DVLIEATSGNTGIALAMIAA   80 (292)
T ss_dssp             CGGGGSSCCCEEECSSSSCCSSCEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTSCCTT-SEEEEECCSHHHHHHHHHHH
T ss_pred             chhcccCCCceEECCccChhhCCEEEEEeCCCCCCCCcHHHHHHHHHHHHHHhCCcCCC-ceeeeecccchhHHHHHHHH
Confidence            47789999999999999999999999999999999999999999999999999987765 68999999999999999999


Q ss_pred             HCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHHHHHHh
Q 028618           91 AKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWK  170 (206)
Q Consensus        91 ~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~  170 (206)
                      ++|++|+||||+++++.|+++++.+||+|+.++.+....++...+.+..++. +.+|.+||+|+.++..|+.++++||++
T Consensus        81 ~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~v~~~~~~~~a~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~a~Ei~~  159 (292)
T d2bhsa1          81 LKGYRMKLLMPDNMSQERRAAMRAYGAELILVTKEQGMEGARDLALEMANRG-EGKLLDQFNNPDNPYAHYTTTGPEIWQ  159 (292)
T ss_dssp             HHTCEEEEEEESCCCHHHHHHHHHTTCEEEEECTTTHHHHHHHHHHHHHHHT-SSEECCTTTCTHHHHHHHHTHHHHHHH
T ss_pred             hcCcceEeeeccCchhhhhHHHHHhCCCcceeecccchHHHHHHHhhccccc-cccccCCCchhcchhhHHHHHHHHhHH
Confidence            9999999999999999999999999999999998765556666666666665 788899999999988899999999999


Q ss_pred             hhCCCCCEEEEccCcchHHHHHHHHHHhcCCCCeEC
Q 028618          171 GSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKVR  206 (206)
Q Consensus       171 q~~~~~d~vv~~vG~Gg~~aGi~~~~k~~~p~~~vi  206 (206)
                      |+++.||+||+|+|+||+++|++.++|+.+|+++|+
T Consensus       160 q~~~~~d~vv~~~G~Gg~~~G~~~~~k~~~~~~~i~  195 (292)
T d2bhsa1         160 QTGGRITHFVSSMGTTGTITGVSRFMREQSKPVTIV  195 (292)
T ss_dssp             HTTTCCCEEEEECSSSHHHHHHHHHHHTSSSCCEEE
T ss_pred             hcCCCCCcccccCCCccchhhhhhhhhhccCcceEE
Confidence            998889999999999999999999999999999885

>d1ve1a1 c.79.1.1 (A:1-302) O-acetylserine sulfhydrylase (Cysteine synthase) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=9.8e-50  Score=331.97  Aligned_cols=195  Identities=54%  Similarity=0.870  Sum_probs=180.1

Q ss_pred             hhhccccCCcceecccccCCCCceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCC-eEEEeeCCCchHHHHHHHH
Q 028618           11 DVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGE-SVLIEPTSGNTGIGLAFMA   89 (206)
Q Consensus        11 ~i~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~-~~vv~aSsGN~g~alA~~a   89 (206)
                      +|...|++|||+++++|++..|++||+|+|++|||||||+|++.+++..|.++|...+++ ++|+++|+||||.|+|++|
T Consensus         2 ri~~~ig~TPLi~~~~l~~~~g~~i~~K~E~~~ptGSfK~Rga~~~i~~a~~~g~~~~~~~~~vv~~SsGN~g~a~A~~a   81 (302)
T d1ve1a1           2 RVEGAIGKTPVVRLAKVVEPDMAEVWVKLEGLNPGGSIKDRPAWYMIKDAEERGILRPGSGQVIVEPTSGNTGIGLAMIA   81 (302)
T ss_dssp             CGGGGCCCCCEEECCSSSCTTSCEEEEEEGGGSTTSBTTHHHHHHHHHHHHHTTSCCTTSCCEEEESCCSHHHHHHHHHH
T ss_pred             cccCccCCCCeEECcccchhhCCEEEEEeCCCCcccCcHHHHHHHHHHHHHHhCCCCCCCCcEEEEecCCcchhhhhhhh
Confidence            578899999999999999999999999999999999999999999999999999876653 6899999999999999999


Q ss_pred             HHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHHHHHH
Q 028618           90 AAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELW  169 (206)
Q Consensus        90 ~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~  169 (206)
                      +.+|++|++|+|+.+++.+++.++.+|++++.++......+....+.+.+++. +++|++||+|+.+++.|++|++.||+
T Consensus        82 ~~~g~~~~iv~p~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~t~~~EI~  160 (302)
T d1ve1a1          82 ASRGYRLILTMPAQMSEERKRVLKAFGAELVLTDPERRMLAAREEALRLKEEL-GAFMPDQFKNPANVRAHYETTGPELY  160 (302)
T ss_dssp             HHHTCEEEEEEETTCCHHHHHHHHHTTCEEEEECTTTHHHHHHHHHHHHHHHH-TCBCCCTTTCHHHHHHHHHTHHHHHH
T ss_pred             hccCcceeEeeecccchheeehhhhhhhcchhcccccchHHHHHHhhhhhhcc-CccccccCccchhHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999998764555666666666665 78999999999998889999999999


Q ss_pred             hhhCCCCCEEEEccCcchHHHHHHHHHHhcCCCCeEC
Q 028618          170 KGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKVR  206 (206)
Q Consensus       170 ~q~~~~~d~vv~~vG~Gg~~aGi~~~~k~~~p~~~vi  206 (206)
                      +|++++||+||+|+|+||+++|++.+|++.+|+++||
T Consensus       161 ~q~~~~~d~vv~~vG~Gg~~~Gi~~~~~~~~~~~~ii  197 (302)
T d1ve1a1         161 EALEGRIDAFVYGSGTGGTITGVGRYLKERIPHVKVI  197 (302)
T ss_dssp             HHTTTCCSEEEEECSSSHHHHHHHHHHHTTCTTCEEE
T ss_pred             HHcCCCCCeEEEeecCcHHHHHHHHHHHhcCCCCEEE
Confidence            9998789999999999999999999999999999986

>d1jbqa_ c.79.1.1 (A:) Cystathionine beta-synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Cystathionine beta-synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.4e-49  Score=336.68  Aligned_cols=201  Identities=45%  Similarity=0.684  Sum_probs=179.3

Q ss_pred             ccchhhhhhccccCCcceecccccCCCC--ceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchH
Q 028618            5 SSNIAKDVTELIGNTPLVYLNNIVNGCV--ARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTG   82 (206)
Q Consensus         5 ~~~~~~~i~~~~~~TPl~~~~~l~~~~g--~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g   82 (206)
                      ..++++.|.+.||+|||+++++|++.+|  ++||+|+|++|||||||+|++.+++.+|.++|.+.++ .+||++|+||||
T Consensus        31 ~~~~~~~i~~~IG~TPLv~l~~ls~~~G~~~~i~~K~E~~nptGSfKdRga~~~i~~a~~~g~~~~~-~~vv~aSsGN~g  109 (355)
T d1jbqa_          31 SPKILPDILKKIGDTPMVRINKIGKKFGLKCELLAKCEFFNAGGSVKDRISLRMIEDAERDGTLKPG-DTIIEPTSGNTG  109 (355)
T ss_dssp             CCSEESSGGGGSSCCCEEECCSHHHHTTCCSEEEEEEGGGSTTSBTHHHHHHHHHHHHHHHTCSCTT-CEEEEECSSHHH
T ss_pred             cccccccHHHhcCCCCcEECcchhHHhCCCCEEEEEECCCCCccCHHHHHHHHHHHHHHHcCCcccC-ceEEEecccchh
Confidence            4567888999999999999999998876  5899999999999999999999999999999987765 689999999999


Q ss_pred             HHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChH---HHHHHHHHHHHhCCCeEEcCCCCCCccHHH
Q 028618           83 IGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMK---GAVQKAEEILAKTPNAYMLQQFENPANPKI  159 (206)
Q Consensus        83 ~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~---~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~  159 (206)
                      .|+|++|+++|++|++|||+++++.|++.|+.+||+|+.++.+....   +....+.+...+.+..+|.++++++.++++
T Consensus       110 ~a~A~~a~~~Gi~~~iv~p~~~~~~k~~~i~~~GA~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a  189 (355)
T d1jbqa_         110 IGLALAAAVRGYRCIIVMPEKMSSEKVDVLRALGAEIVRTPTNARFDSPESHVGVAWRLKNEIPNSHILDQYRNASNPLA  189 (355)
T ss_dssp             HHHHHHHHHHTCEEEEEECSCCCHHHHHHHHHTTCEEEECCC-------CCHHHHHHHHHHHSTTEECCCTTTCTHHHHH
T ss_pred             hHHHHHHHhccCCeEEEeeccchHHHHHHHHhcCCeEEEecccccchhhhhhhhHHHHHHHhccccccccccCcccchhh
Confidence            99999999999999999999999999999999999999997654222   234445555566667888999999998888


Q ss_pred             HHHhHHHHHHhhhCCCCCEEEEccCcchHHHHHHHHHHhcCCCCeEC
Q 028618          160 HYETTGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKVR  206 (206)
Q Consensus       160 g~~t~~~Ei~~q~~~~~d~vv~~vG~Gg~~aGi~~~~k~~~p~~~vi  206 (206)
                      ||.|++.||++|++++||+||+|+|+||+++|++.+|++.+|++|||
T Consensus       190 g~~t~~~EI~~ql~~~~d~vv~~vG~GG~~~Gi~~~lk~~~~~~kii  236 (355)
T d1jbqa_         190 HYDTTADEILQQCDGKLDMLVASVGTGGTITGIARKLKEKCPGCRII  236 (355)
T ss_dssp             HHHTHHHHHHHHHTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEE
T ss_pred             hcccchhhhhhhcCCCCCeeEecccCCchHHHHHHHHhhcCCcceEE
Confidence            99999999999998889999999999999999999999999999985

>d1o58a_ c.79.1.1 (A:) O-acetylserine sulfhydrylase (Cysteine synthase) {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=1.5e-48  Score=323.87  Aligned_cols=190  Identities=51%  Similarity=0.719  Sum_probs=172.6

Q ss_pred             hhhhhccccCCcceecccccCCCCceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHH
Q 028618            9 AKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFM   88 (206)
Q Consensus         9 ~~~i~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~alA~~   88 (206)
                      |+.|..++++|||++++++    +.+||+|+|++|||||||+|++.+++..+.++|...   ..++++|+||||.|+|++
T Consensus         1 ~~~i~~~ig~TPL~~~~~l----~~~i~~K~E~~nptGSfK~Rga~~~i~~a~~~g~~~---~~vv~~SsGN~g~a~A~~   73 (293)
T d1o58a_           1 HHMMERLIGSTPIVRLDSI----DSRIFLKLEKNNPGGSVKDRPALFMILDAEKRGLLK---NGIVEPTSGNMGIAIAMI   73 (293)
T ss_dssp             CCHHHHHSCCCCEEECTTT----CTTEEEEEGGGSTTSBTTHHHHHHHHHHHHHTTCCT---TCEEEECSSHHHHHHHHH
T ss_pred             CchhhhhcCCCCcEECCCC----CCEEEEEECCCCCccChHHHHHHHHHHHHHHcCCCC---cceEEecCcchhhHHHHh
Confidence            5789999999999999866    468999999999999999999999999999999765   459999999999999999


Q ss_pred             HHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHHHHH
Q 028618           89 AAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPEL  168 (206)
Q Consensus        89 a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei  168 (206)
                      |+.+|++|++|+|+++++.|+++++.+||+|+.++.+........++.+++++. +++|+++|+|+.+++.|+.|++.||
T Consensus        74 a~~~g~~~~i~~p~~~~~~k~~~~~~~GA~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~t~~~Ei  152 (293)
T d1o58a_          74 GAKRGHRVILTMPETMSVERRKVLKMLGAELVLTPGELGMKGAVEKALEISRET-GAHMLNQFENPYNVYSHQFTTGPEI  152 (293)
T ss_dssp             HHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHH-CCBCCCTTTCHHHHHHHHHTHHHHH
T ss_pred             hhhccceeEeeccccccHHHeeccccCCcEEEEecCcchhhHHHHHHHHHHhcc-CCEEeeeccccceeeeccccHHHhh
Confidence            999999999999999999999999999999999997754555667777888876 7899999999998888999999999


Q ss_pred             HhhhCCCCCEEEEccCcchHHHHHHHHHHhcCC-CCeEC
Q 028618          169 WKGSGGRIDALVSGIGTGGTITGAGKFLKEKNP-NIKVR  206 (206)
Q Consensus       169 ~~q~~~~~d~vv~~vG~Gg~~aGi~~~~k~~~p-~~~vi  206 (206)
                      ++|++++||+||+|+|+||+++|++.+||+.++ ++|||
T Consensus       153 ~~q~~~~~d~vv~~vG~Gg~~~Gi~~~~k~~~~~~~~ii  191 (293)
T d1o58a_         153 LKQMDYQIDAFVAGVGTGGTISGVGRVLKGFFGNGVKIV  191 (293)
T ss_dssp             HHHTTTCCSEEEEECSSSHHHHHHHHHHHHHHGGGSEEE
T ss_pred             hhhcCCCCCEEEEecCcchhHHHHHHHHHHHCCCCCeEE
Confidence            999988899999999999999999999998655 57875

>d1v71a1 c.79.1.1 (A:6-323) Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c) {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c)
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=100.00  E-value=5.7e-49  Score=329.11  Aligned_cols=193  Identities=19%  Similarity=0.288  Sum_probs=177.4

Q ss_pred             ccchhhhhhccccCCcceecccccCCCCceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHH
Q 028618            5 SSNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIG   84 (206)
Q Consensus         5 ~~~~~~~i~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~a   84 (206)
                      ....+++|...+++|||+++++|++.+|++||+|+|++|||||||||++.+++..+.+.+.    ...++++|+||||.+
T Consensus         8 i~~a~~ri~~~i~~TPl~~~~~l~~~~g~~i~~K~E~~nptGSfKdRga~~~~~~~~~~~~----~~~vv~~ssGN~g~a   83 (318)
T d1v71a1           8 VASASERIKKFANKTPVLTSSTVNKEFVAEVFFKCENFQKMGAFKFRGALNALSQLNEAQR----KAGVLTFSSGNHAQA   83 (318)
T ss_dssp             HHHHHHHHTTTSCCCCEECCHHHHHHHTSEEEEEEGGGSGGGBTHHHHHHHHHTTCCHHHH----HHCEEECCSSHHHHH
T ss_pred             HHHHHHHHhccCCCCCEEEchhhhHHHCCEEEEEeCCCCCCCCHHHHHHHHHHHHhhhccc----cceeeeeccchhhHH
Confidence            3456788999999999999999999999999999999999999999999999988765543    246999999999999


Q ss_pred             HHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhH
Q 028618           85 LAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETT  164 (206)
Q Consensus        85 lA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~  164 (206)
                      +|++|+.+|++|++|+|++.++.++++++.+||+|+.++.+  ++++...+++++++. +++|+++|+||.+ ..||.++
T Consensus        84 ~A~~a~~~g~~~~i~~p~~~~~~k~~~l~~~Ga~vi~~~~~--~~~~~~~a~~~a~~~-g~~~~~~~~~~~~-~~g~~t~  159 (318)
T d1v71a1          84 IALSAKILGIPAKIIMPLDAPEAKVAATKGYGGQVIMYDRY--KDDREKMAKEISERE-GLTIIPPYDHPHV-LAGQGTA  159 (318)
T ss_dssp             HHHHHHHTTCCEEEEEETTCCHHHHHHHHHTTCEEEEECTT--TTCHHHHHHHHHHHH-TCBCCCSSSSHHH-HHHHTHH
T ss_pred             HHHhhcccccceeecccccccHHHHHHHHHcCCcEEeccCC--chHHHHHHHHHHHhc-CCEecCCcccccc-ccccchH
Confidence            99999999999999999999999999999999999999887  567888888898886 7999999999987 6799999


Q ss_pred             HHHHHhhhCCCCCEEEEccCcchHHHHHHHHHHhcCCCCeEC
Q 028618          165 GPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKVR  206 (206)
Q Consensus       165 ~~Ei~~q~~~~~d~vv~~vG~Gg~~aGi~~~~k~~~p~~~vi  206 (206)
                      ++||++|+ +++|+||+|+|+||+++|++.+++..+|+++|+
T Consensus       160 ~~Ei~~q~-~~~d~vvv~~G~GG~~~Gi~~~~~~~~~~~~ii  200 (318)
T d1v71a1         160 AKELFEEV-GPLDALFVCLGGGGLLSGSALAARHFAPNCEVY  200 (318)
T ss_dssp             HHHHHHHH-CCCSEEEEECSSSHHHHHHHHHHHHHCTTCEEE
T ss_pred             HHHHHHhc-CCCCEEEEcCCchHHHHHHHHHHHhhCCCceee
Confidence            99999999 569999999999999999999999999999985

>d1y7la1 c.79.1.1 (A:2-311) O-acetylserine sulfhydrylase (Cysteine synthase) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Haemophilus influenzae [TaxId: 727]

Probab=100.00  E-value=4.2e-47  Score=317.24  Aligned_cols=196  Identities=48%  Similarity=0.767  Sum_probs=173.4

Q ss_pred             hhhhhhccccCCcceecccccCCCCceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHH
Q 028618            8 IAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAF   87 (206)
Q Consensus         8 ~~~~i~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~alA~   87 (206)
                      +|++++..|++|||++++.++.  +.+||+|+|++|||||||+|+|.+++..|.++|.+.++ ++||++|+||||.|+|+
T Consensus         2 ~y~~~~~~ig~TPLv~~~~l~~--~~~I~lK~E~~nptGSfK~RgA~~~i~~a~~~g~~~~~-~~vv~~SsGN~g~a~A~   78 (310)
T d1y7la1           2 IYADNSYSIGNTPLVRLKHFGH--NGNVVVKIEGRNPSYSVKCRIGANMVWQAEKDGTLTKG-KEIVDATSGNTGIALAY   78 (310)
T ss_dssp             CCSSGGGGCCCCCEEECSSSSS--TTCEEEEETTSSGGGBTHHHHHHHHHHHHHHTTSSCTT-CEEEESCCSHHHHHHHH
T ss_pred             ccchhhhhcCCCCeEECCCCCC--CCEEEEEECCCCCcCcCHHHHHHHHHHHHHHcCCCCCC-ceeeeecCCCchHHHHH
Confidence            6889999999999999988876  57999999999999999999999999999999988776 68999999999999999


Q ss_pred             HHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHH-HHHHhCCCeEEcCCCCCCccHHHHHHhHHH
Q 028618           88 MAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAE-EILAKTPNAYMLQQFENPANPKIHYETTGP  166 (206)
Q Consensus        88 ~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~-~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~  166 (206)
                      +|+++|++|+||||+++++.|+++++.+||+|+.+++.....+...... ...+...+.+|+++++|+.++..|+.+++.
T Consensus        79 ~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~  158 (310)
T d1y7la1          79 VAAARGYKITLTMPETMSLERKRLLCGLGVNLVLTEGAKGMKGAIAKAEEIVASDPSRYVMLKQFENPANPQIHRETTGP  158 (310)
T ss_dssp             HHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHCTTTEECCCTTTCTHHHHHHHHTHHH
T ss_pred             HHHHhhccccccchhhhhhhhhhhHHHhCCceEeccCccccchhhHHHHHHHHhhcCccccCCCCcchhhHHHhhhhHHH
Confidence            9999999999999999999999999999999999997642222333222 223334578889999999988889999999


Q ss_pred             HHHhhhCCCCCEEEEccCcchHHHHHHHHHHh-cCCCCeEC
Q 028618          167 ELWKGSGGRIDALVSGIGTGGTITGAGKFLKE-KNPNIKVR  206 (206)
Q Consensus       167 Ei~~q~~~~~d~vv~~vG~Gg~~aGi~~~~k~-~~p~~~vi  206 (206)
                      ||++|+++.||+||+|+|+||+++|++.++|. .+|+++++
T Consensus       159 Ei~~~~~~~~d~vv~~~G~Gg~~~G~~~~lk~~~~~~~~~i  199 (310)
T d1y7la1         159 EIWKDTDGKVDVVVAGVGTGGSITGISRAIKLDFGKQITSV  199 (310)
T ss_dssp             HHHHHTTTCEEEEEEECSSSHHHHHHHHHHHHTSCCCCEEE
T ss_pred             HHHHhcCCCCCEEEecCcCCcchhHHHHHHHHhhcccceec
Confidence            99999988899999999999999999999985 77998875

>d1p5ja_ c.79.1.1 (A:) L-serine dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: L-serine dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.3e-47  Score=318.58  Aligned_cols=184  Identities=18%  Similarity=0.186  Sum_probs=173.6

Q ss_pred             cccCCcceecccccCCCCceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCC
Q 028618           15 LIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQY   94 (206)
Q Consensus        15 ~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~   94 (206)
                      ++.+|||+++++|++.+|++||+|+|++|||||||||++.+++.++.++|.     ++||++|+||||+|+|++|+.+|+
T Consensus         4 ~~~~TPl~~~~~L~~~~g~~i~~K~E~~nptGSfK~R~a~~~~~~a~~~g~-----~~vv~aSsGN~g~a~A~~a~~~G~   78 (319)
T d1p5ja_           4 LHVKTPIRDSMALSKMAGTSVYLKMDSAQPSGSFKIRGIGHFCKRWAKQGC-----AHFVCSSAGNAGMAAAYAARQLGV   78 (319)
T ss_dssp             SSCCCCEEEEHHHHHHHTSCEEEECGGGSGGGBTTHHHHHHHHHHHHHTTC-----CEEEECCSSHHHHHHHHHHHHHTC
T ss_pred             CceeCCcEEhHHhHHHHCCEEEEEeCCCCCCCCcHHHHHHHHHHHHHHcCC-----CEEEEeCCCcHHHHHHHHhhhccc
Confidence            455799999999999999999999999999999999999999999999986     689999999999999999999999


Q ss_pred             cEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHHHHHHhhhCC
Q 028618           95 RLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGG  174 (206)
Q Consensus        95 ~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~q~~~  174 (206)
                      +|+||||+++++.|++.++.+|++|+.++.+  ++++.+.++++++++++++|+++++|+.+ ..||.+++.||++|++.
T Consensus        79 ~~~i~~p~~~~~~k~~~~~~~Ga~v~~~~~~--~~~~~~~~~~~a~~~~~~~~~~~~~~~~~-~~g~~~~~~Ei~~q~~~  155 (319)
T d1p5ja_          79 PATIVVPGTTPALTIERLKNEGATCKVVGEL--LDEAFELAKALAKNNPGWVYIPPFDDPLI-WEGHASIVKELKETLWE  155 (319)
T ss_dssp             CEEEEECTTCCHHHHHHHHHTTCEEEECCSC--HHHHHHHHHHHHHHSTTEEECCSSCCHHH-HHHHTHHHHHHHHHCSS
T ss_pred             cceeccccccccccccccccceecccccccc--chhHHHHHHHHhhccCccccccccccccc-ccccchhhhhhhccccC
Confidence            9999999999999999999999999999988  78999999999988888899999999998 68999999999999988


Q ss_pred             CCCEEEEccCcchHHHHHHHHHHhcC-CCCeEC
Q 028618          175 RIDALVSGIGTGGTITGAGKFLKEKN-PNIKVR  206 (206)
Q Consensus       175 ~~d~vv~~vG~Gg~~aGi~~~~k~~~-p~~~vi  206 (206)
                      .||++|+|+|+||+++|++.++++.. |++++|
T Consensus       156 ~~d~vv~~vg~Gg~~~g~~~~~~~~~~~~~~~i  188 (319)
T d1p5ja_         156 KPGAIALSVGGGGLLCGVVQGLQECGWGDVPVI  188 (319)
T ss_dssp             CCSEEEEECSSSHHHHHHHHHHHHTTCTTCCEE
T ss_pred             CCceeeecccCCcchhhhHHHHHHhccCCeeee
Confidence            89999999999999999999999865 788875

>d1wkva1 c.79.1.1 (A:2-383) O-acetylserine sulfhydrylase (Cysteine synthase) {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=100.00  E-value=7.5e-47  Score=322.82  Aligned_cols=199  Identities=25%  Similarity=0.342  Sum_probs=175.1

Q ss_pred             ccccchhhhhhcccc---CCcceecccccCCCCceEEEEeCCCCCCC-ChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCC
Q 028618            3 VESSNIAKDVTELIG---NTPLVYLNNIVNGCVARIAAKLEMMEPCS-SVKDRIGYSMISDAEAKGLITPGESVLIEPTS   78 (206)
Q Consensus         3 ~~~~~~~~~i~~~~~---~TPl~~~~~l~~~~g~~i~~K~E~~~ptG-S~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSs   78 (206)
                      .+.+++|+...++++   ||||+++ ++....|++||+|+|++||+| |||||+|.+++.+|.++  +.++ .+||++|+
T Consensus        77 ~~~~~~~~~~l~~~~~~~PTPLvrl-~l~~~~G~~IylKlE~~NPtGgSfKdR~A~~~i~~A~~~--~~~g-~~VVeaSS  152 (382)
T d1wkva1          77 VPGEMVFPSPLDFFERGKPTPLVRS-RLQLPNGVRVWLKLEWYNPFSLSVKDRPAVEIISRLSRR--VEKG-SLVADATS  152 (382)
T ss_dssp             SCTTCEESSHHHHHHHSCSCCEEEC-CCCCSTTEEEEEEEGGGSTTTSBTTHHHHHHHHHHHTTT--SCTT-CEEEEECC
T ss_pred             CCcceEeCCHHHHhcCCCCCCEEEC-CCCCCCCCEEEEEecCCCCCCCccHHHHHHHHHHHHHhc--cCCC-CEEEEeCC
Confidence            356688888777664   5999997 566677999999999999986 99999999999988543  4454 57999999


Q ss_pred             CchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEcCCCCCCccHH
Q 028618           79 GNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPK  158 (206)
Q Consensus        79 GN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~  158 (206)
                      ||||.|+|++|+.+|++|+||||+++++.|+++++.+||+|+.++......+..+++.+.+++. +++|++|++|+.++.
T Consensus       153 GN~GiAlA~~aa~lGik~~Iv~P~~~~~~K~~~ira~GAeVi~~~~~~~~~~~~~~a~~~a~~~-~~~~~~q~~N~~~~~  231 (382)
T d1wkva1         153 SNFGVALSAVARLYGYRARVYLPGAAEEFGKLLPRLLGAQVIVDPEAPSTVHLLPRVMKDSKNE-GFVHVNQFYNDANFE  231 (382)
T ss_dssp             HHHHHHHHHHHHHTTCEEEEEEETTSCHHHHHHHHHTTCEEEEETTCSSSGGGHHHHHHHHHHH-CCEECCTTTCHHHHH
T ss_pred             cHHHHHHHHHHHHcCCCEEEEeeccccccccccccccCcceeecCcchhhHHHHHHHhhhcccc-Cccccccccccceee
Confidence            9999999999999999999999999999999999999999999987654556667777777775 789999999999989


Q ss_pred             HHHHhHHHHHHhhhC---CCCCEEEEccCcchHHHHHHHHHHhcCCCCeEC
Q 028618          159 IHYETTGPELWKGSG---GRIDALVSGIGTGGTITGAGKFLKEKNPNIKVR  206 (206)
Q Consensus       159 ~g~~t~~~Ei~~q~~---~~~d~vv~~vG~Gg~~aGi~~~~k~~~p~~~vi  206 (206)
                      .||.|++.||++|+.   ..+|+||+|+|+||+++|++.++|+.+|++|||
T Consensus       232 ~h~~ttg~EI~eQl~~~~~~~d~vv~~vGtGG~~~Gi~~~lk~~~p~vkii  282 (382)
T d1wkva1         232 AHMRGTAREIFVQSRRGGLALRGVAGSLGTSGHMSAAAFYLQSVDPSIRAV  282 (382)
T ss_dssp             HHHHTHHHHHHHHHHHTTCCEEEEEECCSSSHHHHHHHHHHHHHCTTCEEE
T ss_pred             ehhhcchHHHHHHhhcCCCceeEEEEecccccccccceeehhhhCCcccee
Confidence            999999999999983   368999999999999999999999999999986

>d1tdja1 c.79.1.1 (A:5-335) Threonine deaminase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Threonine deaminase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=5e-47  Score=319.29  Aligned_cols=187  Identities=26%  Similarity=0.336  Sum_probs=173.7

Q ss_pred             hhhccccCCcceecccccCCCCceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHHH
Q 028618           11 DVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAA   90 (206)
Q Consensus        11 ~i~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~alA~~a~   90 (206)
                      ++++.+++|||+++++|++.+|.+||+|+|++||+||||+|++.+++..+.+++.    ..+|+++|+||||.|+|++|+
T Consensus        20 ~v~~~~~~TPL~~~~~L~~~lg~~i~~K~E~~nptGS~KdRga~~~i~~~~~~~~----~~~vv~assGN~g~a~A~~a~   95 (331)
T d1tdja1          20 PVYEAAQVTPLQKMEKLSSRLDNVILVKREDRQPVHSFKLRGAYAMMAGLTEEQK----AHGVITASAGNHAQGVAFSSA   95 (331)
T ss_dssp             CGGGTCCCCCEEECHHHHHHTTSEEEEECGGGSTTSSSTHHHHHHHHHTTTTSSC----SSSCEEEECSSSHHHHHHHHH
T ss_pred             ccceeccCCceeEHHHhhHHHCCEEEEEECCCCCCCChHHHHHHHHHHHHHHhCC----CCeeeecccchhHHHHHHhhc
Confidence            5778899999999999999999999999999999999999999999998876654    257999999999999999999


Q ss_pred             HCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHHHHHHh
Q 028618           91 AKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWK  170 (206)
Q Consensus        91 ~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~  170 (206)
                      .+|++|++|||+..+..|+++++.+||+|+.++.+  ++++...+.+.+++. +++|+++++||.+ ..||.|++.||++
T Consensus        96 ~~g~~~~i~~p~~~~~~k~~~l~~~Ga~vi~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~g~~t~~~Ei~~  171 (331)
T d1tdja1          96 RLGVKALIVMPTATADIKVDAVRGFGGEVLLHGAN--FDEAKAKAIELSQQQ-GFTWVPPFDHPMV-IAGQGTLALELLQ  171 (331)
T ss_dssp             HTTCCEEEECCSSCCHHHHHHHHHHSCEEECCCSS--HHHHHHHHHHHHHHH-CCEECCSSCCHHH-HHHHHHHHHHHHH
T ss_pred             cccccceeeccccchhHHHHHHHhcCCEEEEcCcc--cccchhhhhhhhhcC-CCccccccCChHH-hhhhhhHHHHHHH
Confidence            99999999999999999999999999999999887  677888888887775 7999999999998 6899999999999


Q ss_pred             hhCCCCCEEEEccCcchHHHHHHHHHHhcCCCCeEC
Q 028618          171 GSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKVR  206 (206)
Q Consensus       171 q~~~~~d~vv~~vG~Gg~~aGi~~~~k~~~p~~~vi  206 (206)
                      |. ++||+||+|+|+||+++|++.+|++.+|++|||
T Consensus       172 q~-~~~D~vv~~~G~GG~~aG~~~~~~~~~~~~~ii  206 (331)
T d1tdja1         172 QD-AHLDRVFVPVGGGGLAAGVAVLIKQLMPQIKVI  206 (331)
T ss_dssp             HC-TTCCEEEEECSSSHHHHHHHHHHHHHCTTCEEE
T ss_pred             hc-CCCCEEEEeCChhHHHHHHHHHHHHhCCCcEEE
Confidence            98 579999999999999999999999999999986

>d1fcja_ c.79.1.1 (A:) O-acetylserine sulfhydrylase (Cysteine synthase) {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Salmonella typhimurium [TaxId: 90371]

Probab=100.00  E-value=1e-45  Score=307.26  Aligned_cols=193  Identities=49%  Similarity=0.792  Sum_probs=171.2

Q ss_pred             chhhhhhccccCCcceecccccCCCCceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHH
Q 028618            7 NIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLA   86 (206)
Q Consensus         7 ~~~~~i~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~alA   86 (206)
                      ++|+++++++++|||++++++   .+.+||+|+|++|||||||+|++.+++.++.++|++.++ .+++++|+||||.|+|
T Consensus         2 k~~~~i~~~ig~TPLi~L~~l---~~~~i~~K~E~~~ptGSfK~Rga~~~i~~a~~~g~~~~~-~~vv~assGn~g~a~A   77 (302)
T d1fcja_           2 KIYEDNSLTIGHTPLVRLNRI---GNGRILAKVESRNPSFSVKCRIGANMIWDAEKRGVLKPG-VELVEPTNGNTGIALA   77 (302)
T ss_dssp             CEESSGGGGCCCCCEEECSSS---SSSCEEEEETTSSGGGBTHHHHHHHHHHHHHHHTCCCTT-CEEEEECSSHHHHHHH
T ss_pred             chHhHHHHhhCCCCcEECCcc---CCCEEEEEecCCCCCCCCHHHHHHHHHHHHHHcCCCCCC-ceEEEeccccchhHHH
Confidence            578999999999999987655   457999999999999999999999999999999988776 6799999999999999


Q ss_pred             HHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHH---HHHhCCCeEEcCCCCCCccHHHHHHh
Q 028618           87 FMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEE---ILAKTPNAYMLQQFENPANPKIHYET  163 (206)
Q Consensus        87 ~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~---~~~~~~~~~~~~~~~~~~~~~~g~~t  163 (206)
                      ++|+.+|++|++|||.++++.++.+++.+|++|+.++...  .+....++.   ..++..+.++.++++++.++..|++|
T Consensus        78 ~~a~~~g~~~~i~~p~~~~~~k~~~~~~~ga~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t  155 (302)
T d1fcja_          78 YVAAARGYKLTLTMPETMSIERRKLLKALGANLVLTEGAK--GMKGAIQKAEEIVASDPQKYLLLQQFSNPANPEIHEKT  155 (302)
T ss_dssp             HHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGGG--HHHHHHHHHHHHHHTSTTTEEECCTTTCTHHHHHHHHT
T ss_pred             HHHHHhccCCceEEeecCcHHHHHHHHHhccceEEecccc--ccchhhhHHHHHHhhhccceeccccccccchhHHHHhH
Confidence            9999999999999999999999999999999999999873  333333322   22333467889999999988889999


Q ss_pred             HHHHHHhhhCCCCCEEEEccCcchHHHHHHHHHHhcCCCCeE
Q 028618          164 TGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKV  205 (206)
Q Consensus       164 ~~~Ei~~q~~~~~d~vv~~vG~Gg~~aGi~~~~k~~~p~~~v  205 (206)
                      ++.||++|++++||+||+|+|+||+++|++.++|..+|++++
T Consensus       156 i~~Ei~e~~~~~~d~vv~~vG~GG~~~Gi~~~lk~~~~~~~~  197 (302)
T d1fcja_         156 TGPEIWEDTDGQVDVFISGVGTGGTLTGVTRYIKGTKGKTDL  197 (302)
T ss_dssp             HHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHTTTCCTTC
T ss_pred             HHHHHHHhcCCCCCEEEEcCCCccccccceeeeeeccccccc
Confidence            999999999888999999999999999999999999988764

>d1ve5a1 c.79.1.1 (A:2-311) Threonine deaminase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Threonine deaminase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1.7e-46  Score=312.93  Aligned_cols=192  Identities=23%  Similarity=0.285  Sum_probs=172.6

Q ss_pred             cccchhhhhhccccCCcceecccccCCCCceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHH
Q 028618            4 ESSNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGI   83 (206)
Q Consensus         4 ~~~~~~~~i~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~   83 (206)
                      +....|++|...+++|||+++++|++.+|++||+|+|++|||||||||+|.+++.++..       +.+|+++|+||||.
T Consensus         5 ~i~~a~~~i~~~ig~TPL~~~~~L~~~~g~~i~~K~E~~nPtGSfKdRgA~~~~~~~~~-------~~~vv~aSsGN~g~   77 (310)
T d1ve5a1           5 DLYAAFRRIAPYTHRTPLLTSRLLDGLLGKRLLLKAEHLQKTGSFKARGALSKALALEN-------PKGLLAVSSGNHAQ   77 (310)
T ss_dssp             HHHHHHHHHGGGSCCCCEEECHHHHHHTTSEEEEEEGGGSGGGBTHHHHHHHHHHHSSS-------CCCEEEECSSHHHH
T ss_pred             HHHHHHHHHhCcCCCCceeEhhhhhHHhCCEEEEEeCCCCCcCCcHHHHHHHHHHHhcc-------cCCccccCchhhHH
Confidence            34568899999999999999999999999999999999999999999999887765422       14699999999999


Q ss_pred             HHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHh
Q 028618           84 GLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYET  163 (206)
Q Consensus        84 alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t  163 (206)
                      |+|++|+.+|++|+||||++.++.+++.++.+|++|+.++.+  +++....+++.+++. +++|++||+||.+ ..|+.+
T Consensus        78 a~A~~aa~~G~~~~i~vp~~~~~~~~~~~~~~Ga~vi~~~~~--~~~~~~~a~~~~~~~-~~~~~~~~~np~~-~~g~~t  153 (310)
T d1ve5a1          78 GVAYAAQVLGVKALVVMPEDASPYKKACARAYGAEVVDRGVT--AKNREEVARALQEET-GYALIHPFDDPLV-IAGQGT  153 (310)
T ss_dssp             HHHHHHHHHTCCEEEECCCC--CCHHHHHHHTTCEEECTTCC--TTTHHHHHHHHHHHH-CCEECCSSSSHHH-HHHHHH
T ss_pred             HHHHHHHHcCCeEEEeecccchHHHHHHHhhhccccceeecc--chhHHHHHHHHHHhc-CCcCCCCCCChhh-Hhhhhh
Confidence            999999999999999999999999999999999999999887  567888888888886 7999999999998 579999


Q ss_pred             HHHHHHhhhC---CCCCEEEEccCcchHHHHHHHHHHhcCCCCeEC
Q 028618          164 TGPELWKGSG---GRIDALVSGIGTGGTITGAGKFLKEKNPNIKVR  206 (206)
Q Consensus       164 ~~~Ei~~q~~---~~~d~vv~~vG~Gg~~aGi~~~~k~~~p~~~vi  206 (206)
                      ++.||++|+.   ..||+||+|+|+||+++|++.++++.+|.+++|
T Consensus       154 ~~~Ei~~q~~~~~~~~d~vv~~~g~Gg~~~g~~~~~~~~~~~~~ii  199 (310)
T d1ve5a1         154 AGLELLAQAGRMGVFPGAVLAPVGGGGLLAGLATAVKALSPTTLVL  199 (310)
T ss_dssp             HHHHHHHHHHHHTCCCSEEEEECSSSHHHHHHHHHHHHHCTTSEEE
T ss_pred             hHHHHHHHHHhcCCceeeeeeccCcchhhhhhhhhhhccCCccceE
Confidence            9999999973   469999999999999999999999999999875

>d1v7ca_ c.79.1.1 (A:) Threonine synthase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Threonine synthase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=4.3e-39  Score=271.80  Aligned_cols=179  Identities=23%  Similarity=0.217  Sum_probs=159.9

Q ss_pred             hhhccccCCcceeccc--ccCCCCceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHH
Q 028618           11 DVTELIGNTPLVYLNN--IVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFM   88 (206)
Q Consensus        11 ~i~~~~~~TPl~~~~~--l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~alA~~   88 (206)
                      .|+...|+|||+++++  ++...|++||+|+|++||+||||+|++.+++..+.++|.     ++++++|+||||.++|++
T Consensus        21 ~i~~~~gnTPLv~l~~~~l~~~~g~~i~~K~E~~nptGSfK~R~a~~~i~~a~~~g~-----~~iv~~SsGN~g~a~a~~   95 (351)
T d1v7ca_          21 VISLLEGSTPLIPLKGPEEARKKGIRLYAKYEGLNPTGSFKDRGMTLAVSKAVEGGA-----QAVACASTGNTAASAAAY   95 (351)
T ss_dssp             CCCSCCCCCCEEECCCCHHHHTTTEEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTC-----SEEEEECSSHHHHHHHHH
T ss_pred             ccccCCCCCCCeECCCcchhhccCCEEEEEEcCCCCccChHHHHHHHHHHHHHhcCC-----CeeeeeccccHHHHHHHH
Confidence            4666778999999876  456788999999999999999999999999999999885     689999999999999999


Q ss_pred             HHHCCCcEEEEeCCCC-CHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHHHH
Q 028618           89 AAAKQYRLIITMPASM-SLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPE  167 (206)
Q Consensus        89 a~~~g~~~~ivvp~~~-~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~E  167 (206)
                      |+++|++|++|||.+. +..+..+++.+||+|+.++.+  ++++.+.+++++++. ++++. +++++.+ ..||.|++.|
T Consensus        96 a~~~g~~~~i~~p~~~~~~~~~~~~~~~Ga~vi~~~~~--~~~~~~~a~~l~~~~-~~~~~-~~~~~~~-~~g~~t~~~E  170 (351)
T d1v7ca_          96 AARAGILAIVVLPAGYVALGKVAQSLVHGARIVQVEGN--FDDALRLTQKLTEAF-PVALV-NSVNPHR-LEGQKTLAFE  170 (351)
T ss_dssp             HHHHTCEEEEEEETTCSCHHHHHHHHHTTCEEEEEESC--HHHHHHHHHHHHHHS-SCEEC-STTSHHH-HHHHTHHHHH
T ss_pred             HhhhcccceeecCCchHHHHHHHhhhcCCCceEeeccc--cchhhhhHHHHhhhh-ccccc-cccCchh-hhhhhhHHHH
Confidence            9999999999999875 567888899999999999987  789999999999986 56655 4456666 6899999999


Q ss_pred             HHhhhCCCCCEEEEccCcchHHHHHHHHHHhc
Q 028618          168 LWKGSGGRIDALVSGIGTGGTITGAGKFLKEK  199 (206)
Q Consensus       168 i~~q~~~~~d~vv~~vG~Gg~~aGi~~~~k~~  199 (206)
                      |++|+...+|++++++|+||+++|++.+++..
T Consensus       171 i~eQl~~~~d~~~~~~g~gg~~~g~~~~~~~~  202 (351)
T d1v7ca_         171 VVDELGDAPHYHALPVGNAGNITAHWMGYKAY  202 (351)
T ss_dssp             HHHHHSSCCSEEEEECSSSHHHHHHHHHHHHH
T ss_pred             HHHHHhhhccceeeeecccCCcchhHHHHHHH
Confidence            99999888999999999999999999988764

>d1e5xa_ c.79.1.1 (A:) Threonine synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Threonine synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=1.4e-38  Score=279.44  Aligned_cols=186  Identities=19%  Similarity=0.103  Sum_probs=164.6

Q ss_pred             hhhhhccccCCcceecccccCC-CC-ceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHH
Q 028618            9 AKDVTELIGNTPLVYLNNIVNG-CV-ARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLA   86 (206)
Q Consensus         9 ~~~i~~~~~~TPl~~~~~l~~~-~g-~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~alA   86 (206)
                      .+.++...|+|||+++++|++. .| .+||+|+|++|||||||||++.+++..+.+.+....+..+++++|+||||.|+|
T Consensus       112 ~~~v~lgeG~TPLv~~~~L~~~~lG~~~ly~K~E~~nPTGSfKDRga~~~i~~a~~~~~~~~~~~~vv~aSsGNtg~AlA  191 (477)
T d1e5xa_         112 DDIVSAFEGNSNLFWAERFGKQFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMKRPVVGVGCASTGDTSAALS  191 (477)
T ss_dssp             GGCCCCCCCCCCEEECHHHHHHHHCCSSEEEEETTSSTTSBTTHHHHHHHHHHHHHHHHTTCCCCEEEECCCSHHHHHHH
T ss_pred             CCccccCCCCCceEEchhhhHhhCCCceEEEEECCCCCCcccHHHHHHHHHHHHHHhccccCCcceEEeecCchHHHHHH
Confidence            3447788999999999999875 56 489999999999999999999999998876554444446899999999999999


Q ss_pred             HHHHHCCCcEEEEeCCC-CCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHhHH
Q 028618           87 FMAAAKQYRLIITMPAS-MSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTG  165 (206)
Q Consensus        87 ~~a~~~g~~~~ivvp~~-~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~  165 (206)
                      ++|+++|++|+||+|.+ .++.|+.+++.+||+|+.++++  ++++.+.+++++++. + +|+.++.|+.+ ..|+.|++
T Consensus       192 a~aa~~Gi~~~I~~P~~~~s~~k~~~~~~~GA~V~~v~g~--~dda~~~~~e~a~~~-~-~~~~~~~N~~~-~~g~~t~~  266 (477)
T d1e5xa_         192 AYCASAGIPSIVFLPANKISMAQLVQPIANGAFVLSIDTD--FDGCMKLIREITAEL-P-IYLANSLNSLR-LEGQKTAA  266 (477)
T ss_dssp             HHHHHHTCCEEEEEEGGGCCHHHHHHHHHTTCEEEEEESC--HHHHHHHHHHHHHHS-C-EEEGGGSHHHH-HHHHTHHH
T ss_pred             HHHHhcCCCeEEEeCCCCcCHHHHHHHHhcCccccccccC--chhhHHHhhhhcccc-c-eeccccccccc-chhhhHHH
Confidence            99999999999999985 7889999999999999999988  889999999999886 4 45667788888 57999999


Q ss_pred             HHHHhhhCC-CCCEEEEccCcchHHHHHHHHHHhc
Q 028618          166 PELWKGSGG-RIDALVSGIGTGGTITGAGKFLKEK  199 (206)
Q Consensus       166 ~Ei~~q~~~-~~d~vv~~vG~Gg~~aGi~~~~k~~  199 (206)
                      .||++|+++ .||++++|+|+||+++|++.++++.
T Consensus       267 ~Ei~~ql~~~~pd~v~vp~G~gg~~~g~~~g~~~l  301 (477)
T d1e5xa_         267 IEILQQFDWQVPDWVIVPGGNLGNIYAFYKGFKMC  301 (477)
T ss_dssp             HHHHHHTTSCCCSEEEEECSSTHHHHHHHHHHHHH
T ss_pred             HHHHHhhccccceeeeecccCCcchhhHHHHHHHH
Confidence            999999975 5999999999999999999999864

>d1v8za1 c.79.1.1 (A:1-386) Tryptophan synthase, beta-subunit {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Tryptophan synthase, beta-subunit
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=100.00  E-value=2e-37  Score=265.46  Aligned_cols=189  Identities=19%  Similarity=0.197  Sum_probs=154.2

Q ss_pred             hcccc-CCcceecccccCCC-CceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHHH
Q 028618           13 TELIG-NTPLVYLNNIVNGC-VARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAA   90 (206)
Q Consensus        13 ~~~~~-~TPl~~~~~l~~~~-g~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~alA~~a~   90 (206)
                      ..+++ +|||+++++|++.+ +++||+|+|++|||||||+|++.+++..|.++|.    .+.++++|+||||.++|++|+
T Consensus        44 ~~~~~rpTPLi~~~~Ls~~lgg~~Iy~K~E~lnptGS~KdR~a~~~i~~a~~~G~----~~~v~~~s~Gn~g~a~A~aaa  119 (386)
T d1v8za1          44 KTWAGRPTPLYYAKRLTEKIGGAKIYLKREDLVHGGAHKTNNAIGQALLAKFMGK----TRLIAETGAGQHGVATAMAGA  119 (386)
T ss_dssp             HHTTCCSCCEEECHHHHHHHTSSEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTC----CEEEEEESSSHHHHHHHHHHH
T ss_pred             HhcCCCCCcceEhHhhHHhcCCCeEEEEeccCCCCCCccchHHHHHHHHHhhcCC----ceeEeecccchHHHHHHHHHH
Confidence            44565 69999999999877 5899999999999999999999999999999997    357888899999999999999


Q ss_pred             HCCCcEEEEeCCC---CCHHHHHHHHHcCCEEEEeCCCC-ChHHHHHHHHH-HHHhCCCeEE-----cCCCCCCccHHHH
Q 028618           91 AKQYRLIITMPAS---MSLERRIILRAFGAELVLTDPAK-GMKGAVQKAEE-ILAKTPNAYM-----LQQFENPANPKIH  160 (206)
Q Consensus        91 ~~g~~~~ivvp~~---~~~~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~-~~~~~~~~~~-----~~~~~~~~~~~~g  160 (206)
                      ++|++|++|||..   ....|+.+++.+||+|+.++... .+.++...+.+ .........+     .++++++.++..+
T Consensus       120 ~~G~~~~i~mp~~~~~~~~~kv~~~~~~GA~Vv~v~~~~~~~~da~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  199 (386)
T d1v8za1         120 LLGMKVDIYMGAEDVERQKMNVFRMKLLGANVIPVNSGSRTLKDAINEALRDWVATFEYTHYLIGSVVGPHPYPTIVRDF  199 (386)
T ss_dssp             HTTCEEEEEEEHHHHTTCHHHHHHHHHTTCEEEEECSTTSSHHHHHHHHHHHHHHHTTTEEECCCSSCSSTTHHHHHHHH
T ss_pred             HcCCcccccccchhhhhhHHHHHHHHhcCCeEEEecCCcchHHHHHHHHHHHHHhhhhhhhhccccccCccccchhhhcc
Confidence            9999999999964   45688999999999999997532 35555555443 3333323332     3456666676779


Q ss_pred             HHhHHHHHHhhh----CCCCCEEEEccCcchHHHHHHHHHHhcCCCCeEC
Q 028618          161 YETTGPELWKGS----GGRIDALVSGIGTGGTITGAGKFLKEKNPNIKVR  206 (206)
Q Consensus       161 ~~t~~~Ei~~q~----~~~~d~vv~~vG~Gg~~aGi~~~~k~~~p~~~vi  206 (206)
                      +.+++.||.+|+    +..||+||+|+|+|++++|++.++++ +|++++|
T Consensus       200 ~~~~~~Ei~~q~~~~~g~~pd~vv~~vGgG~~~~g~~~~~~~-~~~v~ii  248 (386)
T d1v8za1         200 QSVIGREAKAQILEAEGQLPDVIVACVGGGSNAMGIFYPFVN-DKKVKLV  248 (386)
T ss_dssp             HHHHHHHHHHHHHHHHSSCCSEEEEECSSSHHHHHHHGGGTT-CTTSEEE
T ss_pred             chhhhhhHHHHHHHhcCCCCCEEEECCCChHHHHHHHHHhhh-ccCceEE
Confidence            999999998886    45699999999999999999887655 6888875

>d1qopb_ c.79.1.1 (B:) Tryptophan synthase, beta-subunit {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Tryptophan synthase, beta-subunit
species: Salmonella typhimurium [TaxId: 90371]

Probab=100.00  E-value=2e-37  Score=265.75  Aligned_cols=188  Identities=19%  Similarity=0.170  Sum_probs=151.2

Q ss_pred             hccccC-CcceecccccCCCCceEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHHHH
Q 028618           13 TELIGN-TPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAA   91 (206)
Q Consensus        13 ~~~~~~-TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~alA~~a~~   91 (206)
                      ..++++ |||+++++|++.+|++||+|+|++|||||||+|++..++..|++.|+    ++.++++|+||||.++|++|++
T Consensus        49 ~~~~grpTPL~~~~~Ls~~lg~~IylK~E~lnptGS~K~R~a~~~i~~A~~~G~----~~iv~easaGN~g~a~A~aaa~  124 (390)
T d1qopb_          49 KNYAGRPTALTKCQNITAGTRTTLYLKREDLLHGGAHKTNQVLGQALLAKRMGK----SEIIAETGAGQHGVASALASAL  124 (390)
T ss_dssp             HHTTCCSCCEEECHHHHTTSSEEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTC----CEEEEEESSSHHHHHHHHHHHH
T ss_pred             HhcCCCCchhhEhHhhhhhhCCEEEEEEecCCcccccchhHHHHHHHHHhhcCC----ceeeeehhHHHHHHHHHHHHHh
Confidence            456655 99999999999999999999999999999999999999999999997    3577889999999999999999


Q ss_pred             CCCcEEEEeCCCCC---HHHHHHHHHcCCEEEEeCCCC-ChHHHHHHH-HHHHHhCCCeEEcCCCCCC-----ccHHHHH
Q 028618           92 KQYRLIITMPASMS---LERRIILRAFGAELVLTDPAK-GMKGAVQKA-EEILAKTPNAYMLQQFENP-----ANPKIHY  161 (206)
Q Consensus        92 ~g~~~~ivvp~~~~---~~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a-~~~~~~~~~~~~~~~~~~~-----~~~~~g~  161 (206)
                      +|++|+||||+..+   ..++.+|+.+||+|+.++... .+.++...+ +.++......+|.....+.     .....++
T Consensus       125 ~Gl~~~I~mp~~~~~~k~~~v~~m~~~GAeVv~v~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (390)
T d1qopb_         125 LGLKCRIYMGAKDVERQSPNVFRMRLMGAEVIPVHSGSATLKDACNEALRDWSGSYETAHYMLGTAAGPHPYPTIVREFQ  204 (390)
T ss_dssp             HTCEEEEEEEHHHHHHCHHHHHHHHHTTCEEEEECSTTSSHHHHHHHHHHHHHHHTTTEEECCCSSCSSTTHHHHHHHTT
T ss_pred             ccCceEEeecccccccchHHHHHHHhcCceEEEecCCchhhhHhHHHHHHHHhhhhhhhhhccccccccccccccccchh
Confidence            99999999999654   677899999999999997532 344444444 4455554455554333222     2223588


Q ss_pred             HhHHHHHHhhh----CCCCCEEEEccCcchHHHHHHHHHHhcCCCCeE
Q 028618          162 ETTGPELWKGS----GGRIDALVSGIGTGGTITGAGKFLKEKNPNIKV  205 (206)
Q Consensus       162 ~t~~~Ei~~q~----~~~~d~vv~~vG~Gg~~aGi~~~~k~~~p~~~v  205 (206)
                      .+++.|+.+|+    +..||+||+|+|+|++++|++.+|++. +++++
T Consensus       205 ~~iG~e~~~q~~~~~g~~pD~vv~~vGgGs~~~G~~~~f~~~-~~~~~  251 (390)
T d1qopb_         205 RMIGEETKAQILDKEGRLPDAVIACVGGGSNAIGMFADFIND-TSVGL  251 (390)
T ss_dssp             THHHHHHHHHHHHHHSSCCSEEEEECSSSHHHHHHHGGGTTC-TTSEE
T ss_pred             hhhcchhHHHHHHHcCCccceEEecccccchhhheecccccc-cceeE
Confidence            89999997774    456999999999999999999999764 45554

>d1j0aa_ c.79.1.1 (A:) 1-aminocyclopropane-1-carboxylate deaminase {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: 1-aminocyclopropane-1-carboxylate deaminase
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=100.00  E-value=1.2e-34  Score=240.91  Aligned_cols=194  Identities=20%  Similarity=0.191  Sum_probs=150.9

Q ss_pred             hhhhccccCCcceecccccCCCCceEEEEeCCCC--CCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHH
Q 028618           10 KDVTELIGNTPLVYLNNIVNGCVARIAAKLEMME--PCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAF   87 (206)
Q Consensus        10 ~~i~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~--ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~alA~   87 (206)
                      ++++...++|||+++++|++.+|++||+|+|++|  |+||||+|++.+++..+.++|...   ..++++|+||||.|+|+
T Consensus        13 p~i~l~~~~TPL~~~~~L~~~~G~~v~iK~Ed~~~~~tgS~K~R~~~~~i~~a~~~g~~~---~~~~~~s~gN~g~a~A~   89 (325)
T d1j0aa_          13 PRVELIPWETPIQYLPNISREIGADVYIKRDDLTGLGIGGNKIRKLEYLLGDALSKGADV---VITVGAVHSNHAFVTGL   89 (325)
T ss_dssp             CCCCCCCSCCCEEECHHHHHHHTSEEEEEEGGGSCSTTCSTHHHHHHHHHHHHHHTTCSE---EEEECCTTCHHHHHHHH
T ss_pred             CcccCCCCCCceeEHHHhHHHHCCEEEEEecCCCCCCcchhHHHHHHHHHHHHHHCCCCe---eEEEeeCcchHHHHHHH
Confidence            5677788999999999999999999999999877  999999999999999999888621   34556799999999999


Q ss_pred             HHHHCCCcEEEEeCCCCCHHHHHHHHHc---CCEEEEeCCCCChHH-HHHHHHHHHHhCCCeEEcCCCCCCccHHHHHHh
Q 028618           88 MAAAKQYRLIITMPASMSLERRIILRAF---GAELVLTDPAKGMKG-AVQKAEEILAKTPNAYMLQQFENPANPKIHYET  163 (206)
Q Consensus        88 ~a~~~g~~~~ivvp~~~~~~~~~~~~~~---Ga~v~~~~~~~~~~~-~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t  163 (206)
                      +|+.+|++|++|+|...+..+...+..+   |++++..+....... ....+.+...+....+++.++.+......++.+
T Consensus        90 ~a~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (325)
T d1j0aa_          90 AAKKLGLDAILVLRGKEELKGNYLLDKIMGIETRVYDAKDSFELMKYAEEIAEELKREGRKPYVIPPGGASPIGTLGYVR  169 (325)
T ss_dssp             HHHHTTCEEEEEEESCCCSCHHHHHHHHTTCEEEEESCCSTTTHHHHHHHHHHHHTTSSCCEEEECGGGCSHHHHTHHHH
T ss_pred             HHhhhcCceEEEeecccccchhhhhccccceeEEeccCcccccchHHHHHHHHHHHhhccCceeeecCCCccccccccch
Confidence            9999999999999998776665555443   344443343321111 222233333333445555554554444678999


Q ss_pred             HHHHHHhhhCCCCCEEEEccCcchHHHHHHHHHHhcCCCCeEC
Q 028618          164 TGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKVR  206 (206)
Q Consensus       164 ~~~Ei~~q~~~~~d~vv~~vG~Gg~~aGi~~~~k~~~p~~~vi  206 (206)
                      ++.|+.+|.+..||+||+|+|+|++++|+..+++...|+++++
T Consensus       170 ~~~e~~~~~~~~~d~vv~~~G~G~~~~gi~~~~~~~~~~~~v~  212 (325)
T d1j0aa_         170 AVGEIATQSEVKFDSIVVAAGSGGTLAGLSLGLSILNEDIRPV  212 (325)
T ss_dssp             HHHHHHHHCCCCCSEEEEEESSSHHHHHHHHHHHHTTCCCEEE
T ss_pred             hhcccccccccccceeecccccchhhhhHHHHHHhhCcccccc
Confidence            9999999998889999999999999999999999999998874

>d1tyza_ c.79.1.1 (A:) 1-aminocyclopropane-1-carboxylate deaminase {Pseudomonas sp., strain ACP [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: 1-aminocyclopropane-1-carboxylate deaminase
species: Pseudomonas sp., strain ACP [TaxId: 306]

Probab=100.00  E-value=1.2e-32  Score=227.30  Aligned_cols=195  Identities=18%  Similarity=0.074  Sum_probs=147.0

Q ss_pred             chhhhhhccccCCcceecccccCCCC--ceEEEEeCCCCCCCCh---hhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCch
Q 028618            7 NIAKDVTELIGNTPLVYLNNIVNGCV--ARIAAKLEMMEPCSSV---KDRIGYSMISDAEAKGLITPGESVLIEPTSGNT   81 (206)
Q Consensus         7 ~~~~~i~~~~~~TPl~~~~~l~~~~g--~~i~~K~E~~~ptGS~---K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~   81 (206)
                      .-+++++..+++|||+++++|++.+|  ++||+|+|++||+|||   |+|++.+++.+++++|..   ...++++|+|||
T Consensus         4 ~~~~r~~l~~g~TPL~~~~~L~~~lg~~~~i~~K~E~~~ptgS~~gnK~R~~~~~i~~a~~~g~~---~v~~~~~s~gN~   80 (338)
T d1tyza_           4 QRFPRYPLTFGPTPIQPLARLSKHLGGKVHLYAKREDCNSGLAFGGNKTRKLEYLIPEALAQGCD---TLVSIGGIQSNQ   80 (338)
T ss_dssp             GGSCCCCCSSSSCCEEECHHHHHHTTSSSEEEEEEGGGSCSSTTCCHHHHHHHHHHHHHHHTTCC---EEEEEEETTCHH
T ss_pred             ccCCccccCCCCCceeEhHHHHHHHCCCCEEEEEECCCCCCcccccCHHHHHHHHHHHHHHCCCC---eEEEEccCCchH
Confidence            34567889999999999999998887  5899999999999999   999999999999999861   133456799999


Q ss_pred             HHHHHHHHHHCCCcEEEEeCCCCCH--------HHHHHHHHcCCEEEEeCCCCCh---HHHHHHHHHHHHhCCCeEEcCC
Q 028618           82 GIGLAFMAAAKQYRLIITMPASMSL--------ERRIILRAFGAELVLTDPAKGM---KGAVQKAEEILAKTPNAYMLQQ  150 (206)
Q Consensus        82 g~alA~~a~~~g~~~~ivvp~~~~~--------~~~~~~~~~Ga~v~~~~~~~~~---~~~~~~a~~~~~~~~~~~~~~~  150 (206)
                      |.|+|++|+.+|++|++|+|...+.        .+.+.++.+|+.+..++.....   ......+....+...+.++..+
T Consensus        81 g~A~A~~a~~~g~~~~i~~p~~~~~~k~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (338)
T d1tyza_          81 TRQVAAVAAHLGMKCVLVQENWVNYSDAVYDRVGNIQMSRILGADVRLVPDGFDIGFRRSWEDALESVRAAGGKPYAIPA  160 (338)
T ss_dssp             HHHHHHHHHHHTCEEEEEEECCSSCCCTTTTTSHHHHHHHHTTCEEECCCC-------CHHHHHHHHHHHTTCCEEEECG
T ss_pred             HHHHHHHHhhccCcEEEEECCCcchhhhhhhhccccceeeeeccccccccCCcchhHHHHHHHHHhhhhhcccceeeecc
Confidence            9999999999999999999986543        4556788999999999865321   1222333334444445565555


Q ss_pred             CCCCccHHHHHHhHHHHH-----HhhhCCCCCEEEEccCcchHHHHHHHHHHhcCCCCeE
Q 028618          151 FENPANPKIHYETTGPEL-----WKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKV  205 (206)
Q Consensus       151 ~~~~~~~~~g~~t~~~Ei-----~~q~~~~~d~vv~~vG~Gg~~aGi~~~~k~~~p~~~v  205 (206)
                      +.++.. ..+..+.+.|.     .++.+..||+||+|+|+|++++|++.+|+...+..++
T Consensus       161 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~iv~~~G~G~~~~G~~~~~~~~~~~~~~  219 (338)
T d1tyza_         161 GCSDHP-LGGLGFVGFAEEVRAQEAELGFKFDYVVVCSVTGSTQAGMVVGFAADGRADRV  219 (338)
T ss_dssp             GGTSST-TTTTHHHHHHHHHHHHHHHHTSCCSEEEEEESSSHHHHHHHHHHHTTTCGGGE
T ss_pred             cCccCc-cccccccchHHHHHHHHHhcCCCccEEEEeecChhHHHHHHHHHHHHhhhhcc
Confidence            444433 33444444443     3334567999999999999999999999998876654

>d1f2da_ c.79.1.1 (A:) 1-aminocyclopropane-1-carboxylate deaminase {Yeast (Hansenula saturnus) [TaxId: 4906]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: 1-aminocyclopropane-1-carboxylate deaminase
species: Yeast (Hansenula saturnus) [TaxId: 4906]

Probab=99.97  E-value=1.8e-31  Score=221.04  Aligned_cols=193  Identities=16%  Similarity=0.113  Sum_probs=150.0

Q ss_pred             hhhhhccccCCcceecccccCCCC--ceEEEEeCCCCCCCCh---hhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHH
Q 028618            9 AKDVTELIGNTPLVYLNNIVNGCV--ARIAAKLEMMEPCSSV---KDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGI   83 (206)
Q Consensus         9 ~~~i~~~~~~TPl~~~~~l~~~~g--~~i~~K~E~~~ptGS~---K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~   83 (206)
                      ++++...+++|||+++++|++.+|  .+||+|+|++||+|||   |+|++.+++.++.++|.-   ...++++|+||||.
T Consensus         6 ~~~~~l~~~~TPl~~~~~L~~~lg~~~~i~~K~E~~~p~GSf~gnK~R~~~~~i~~a~~~g~~---~i~~~~as~gN~g~   82 (341)
T d1f2da_           6 FAKYPLTFGPSPISNLNRLSQHLGSKVNVYAKREDCNSGLAFGGNKLRKLEYIVPDIVEGDYT---HLVSIGGRQSNQTR   82 (341)
T ss_dssp             SCCCCCSSSSCCEEECHHHHHHTTTCSEEEEEEGGGSCSSTTCCHHHHHHTTTHHHHHHSCCS---EEEEEEETTCHHHH
T ss_pred             ccCccCCCCCCceeEHHHHHHHHCCCCEEEEEECCCCCCCccccChHHHHHHHHHHHHHCCCC---EEEEEccCcchHHH
Confidence            456788899999999999999887  4899999999999999   999999999999998862   13446789999999


Q ss_pred             HHHHHHHHCCCcEEEEeCCCCCHH-----------HHHHHHHcCCEEEEeCCCCCh---HHHHHHHHHHHHhCCCeEEcC
Q 028618           84 GLAFMAAAKQYRLIITMPASMSLE-----------RRIILRAFGAELVLTDPAKGM---KGAVQKAEEILAKTPNAYMLQ  149 (206)
Q Consensus        84 alA~~a~~~g~~~~ivvp~~~~~~-----------~~~~~~~~Ga~v~~~~~~~~~---~~~~~~a~~~~~~~~~~~~~~  149 (206)
                      |+|++|+.+|++|++|||.+.+..           ++..++.+|+++..++.....   .................++..
T Consensus        83 a~A~~a~~~g~~~~i~~p~~~~~~k~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (341)
T d1f2da_          83 MVAALAAKLGKKCVLIQEDWVPIPEAEKDVYNRVGNIELSRIMGADVRVIEDGFDIGMRKSFANALQELEDAGHKPYPIP  162 (341)
T ss_dssp             HHHHHHHHHTCEEEEEEECCSCCCGGGTTTTTTSHHHHHHHHTTCEEEECCCCCCSSCCHHHHHHHHHHHHTTCCEEEEC
T ss_pred             HHHHHHHHhcCceEEEccCCCCHHHHHHHHHhhccceechhhccccccccCCchhhHHHHHHHHHHHHHHhhccCccccC
Confidence            999999999999999999987654           456678999999999875421   223333333344443444433


Q ss_pred             CCC--CCccHHHHHHhHHHHHHhhh---CCCCCEEEEccCcchHHHHHHHHHHhcCCCCeE
Q 028618          150 QFE--NPANPKIHYETTGPELWKGS---GGRIDALVSGIGTGGTITGAGKFLKEKNPNIKV  205 (206)
Q Consensus       150 ~~~--~~~~~~~g~~t~~~Ei~~q~---~~~~d~vv~~vG~Gg~~aGi~~~~k~~~p~~~v  205 (206)
                      .+.  ++.. ..++.+.+.++.+|.   ...||++|+|+|+|++++|++.++++..+..++
T Consensus       163 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~G~G~~~~g~~~~~~~~~~~~~~  222 (341)
T d1f2da_         163 AGCSEHKYG-GLGFVGFADEVINQEVELGIKFDKIVVCCVTGSTTAGILAGMAQYGRQDDV  222 (341)
T ss_dssp             GGGTTSTTT-TTHHHHHHHHHHHHHHHHTCCCSEEEEEESSSHHHHHHHHHHGGGTCGGGE
T ss_pred             Ccccccccc-hhhehhhhHHHHHHHhhccCCceEEEEecccccchhhHHHHHHHhcccccc
Confidence            322  3333 457777777776664   457999999999999999999999998876654

>d1vb3a1 c.79.1.1 (A:1-428) Threonine synthase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Threonine synthase
species: Escherichia coli [TaxId: 562]

Probab=99.76  E-value=6.5e-18  Score=144.55  Aligned_cols=169  Identities=12%  Similarity=0.024  Sum_probs=127.6

Q ss_pred             eEEEEeCCCCCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHC-CCcEEEEeCCC-CCHHHHHH
Q 028618           34 RIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAK-QYRLIITMPAS-MSLERRII  111 (206)
Q Consensus        34 ~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~-g~~~~ivvp~~-~~~~~~~~  111 (206)
                      ++|+.--.+.||+|||||++..+...+...+.  .+...|++|||||+|.|.+.+++.. +++++++.|.+ +++.+..+
T Consensus        92 ~~~~lELfhGPT~aFKD~a~~~~~~~~~~~~~--~~~~~Il~ATSGDTG~Aa~~a~~~~~~i~~~vl~P~g~vS~~Q~~Q  169 (428)
T d1vb3a1          92 DVGCLELFHGPTLAFKDFGGRFMAQMLTHIAG--DKPVTILTATSGDTGAAVAHAFYGLPNVKVVILYPRGKISPLQEKL  169 (428)
T ss_dssp             TEEEEECCCSTTSBTHHHHHHHHHHHHHHHTT--TCCEEEEEECSSSHHHHHHHHTTTCTTEEEEEEEETTCSCHHHHHH
T ss_pred             CceeeeeccCCCcccccchhhHHHHHHhhhcc--cccceeeecCCCCcchhHHHHHhCccccceEEEecCCCCcHHHHHH
Confidence            67888888889999999998876554443322  1236899999999999999888766 69999999975 89999999


Q ss_pred             HHHcCCEEEEeCCCCChHHHHHHHHHHHHhCC----CeEEcCCCCCCccHHHHHHhHHHHHHhhhCC---CCCEEEEccC
Q 028618          112 LRAFGAELVLTDPAKGMKGAVQKAEEILAKTP----NAYMLQQFENPANPKIHYETTGPELWKGSGG---RIDALVSGIG  184 (206)
Q Consensus       112 ~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~----~~~~~~~~~~~~~~~~g~~t~~~Ei~~q~~~---~~d~vv~~vG  184 (206)
                      |..+|++|..+.-+.++++|...++++..+.+    .....-..-|+.. +.++.+...|++.|+..   .++.+++|+|
T Consensus       170 mtt~g~nv~vi~V~G~fDDcq~lvk~~f~d~~~~~~~~l~s~NSIN~~R-l~~Q~vyyf~a~~ql~~~~~~~~~~~VPtG  248 (428)
T d1vb3a1         170 FCTLGGNIETVAIDGDFDACQALVKQAFDDEELKVALGLNSANSINISR-LLAQICYYFEAVAQLPQETRNQLVVSVPSG  248 (428)
T ss_dssp             HHSCCTTEEEEEEESCHHHHHHHHHHGGGCHHHHHHHTEECCSTTSHHH-HHHTTHHHHHHHTTSCTTTTTSEEEEEECS
T ss_pred             HhhccCCceEEecCCChhHHHHHHHHHhhhhhhhhcCCeeeecccChhH-HhhhHHHHHHHHHHhccccCCceEEeccHH
Confidence            99999987655433349999999988876531    0111111134444 46999999999999853   4789999999


Q ss_pred             cchHHHHHHHHHHhcCCCCeE
Q 028618          185 TGGTITGAGKFLKEKNPNIKV  205 (206)
Q Consensus       185 ~Gg~~aGi~~~~k~~~p~~~v  205 (206)
                      ++|.+.+.+.+.+.-.|--++
T Consensus       249 NfGni~Ag~~Ak~mGLPi~~~  269 (428)
T d1vb3a1         249 NFGDLTAGLLAKSLGLPVKRF  269 (428)
T ss_dssp             SCHHHHHHHHHHHTTCCCSEE
T ss_pred             HHHHHHHHHHhhhcCCceeee
Confidence            999999999888876665554

>d1kl7a_ c.79.1.1 (A:) Threonine synthase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Threonine synthase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.07  E-value=9.6e-09  Score=88.66  Aligned_cols=183  Identities=16%  Similarity=0.057  Sum_probs=117.8

Q ss_pred             CcceecccccCCCCceEEEEeCCCCCCCChhhHHHHHHHHHH---H-HcC-CC---CCCCeEEEeeCCCchHHHHHHHHH
Q 028618           19 TPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDA---E-AKG-LI---TPGESVLIEPTSGNTGIGLAFMAA   90 (206)
Q Consensus        19 TPl~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~~~~a---~-~~g-~~---~~~~~~vv~aSsGN~g~alA~~a~   90 (206)
                      +||.++.   .....++|+=-=.+-||.+|||.++..+....   . +++ .+   ...+..|++||||.+|.|.+.+++
T Consensus        96 ~pl~~~~---~~~~~~~~vlELfhGPT~aFKD~a~~~l~~~~~~~l~~~~~~~~~~~~~~~~il~aTSGDTG~Aa~~af~  172 (511)
T d1kl7a_          96 TPLVQNV---TGDKENLHILELFHGPTYAFKDVALQFVGNLFEYFLQRTNANLPEGEKKQITVVGATSGDTGSAAIYGLR  172 (511)
T ss_dssp             SCEECCT---TCSSSCEEEEECCCSTTSBTHHHHHHHHHHHHHHHHHHHHTTSCSSSCCCEEEEEECSSSHHHHHHHHHT
T ss_pred             Ccccccc---cCCCCceEEEeeccCCcccccCcchhhHHHHHHHHHHhcccccccccCceEEEEEecCCCccHHHHHHhc
Confidence            5665542   22233677544445699999999887665432   2 211 00   112368999999999999999986


Q ss_pred             -HCCCcEEEEeCCC-CCHHHHHHHHHcCC-EEEEeCCCCChHHHHHHHHHHHHhCC--CeEEcCCCCCCccHHH------
Q 028618           91 -AKQYRLIITMPAS-MSLERRIILRAFGA-ELVLTDPAKGMKGAVQKAEEILAKTP--NAYMLQQFENPANPKI------  159 (206)
Q Consensus        91 -~~g~~~~ivvp~~-~~~~~~~~~~~~Ga-~v~~~~~~~~~~~~~~~a~~~~~~~~--~~~~~~~~~~~~~~~~------  159 (206)
                       .-+++++|+.|.+ +++.+.++|...++ +|+.+.-+.++++|...++++..+..  ..+.+. .-|.-||..      
T Consensus       173 ~~~~i~v~vlyP~~~vS~iQ~~Qmtt~~~~Nv~~i~v~G~fDDcq~~vk~~f~d~~~~~~~~l~-s~NSiNw~Rll~Qiv  251 (511)
T d1kl7a_         173 GKKDVSVFILYPTGRISPIQEEQMTTVPDENVQTLSVTGTFDNCQDIVKAIFGDKEFNSKHNVG-AVNSINWARILAQMT  251 (511)
T ss_dssp             TCTTEEEEEEEETTSSCHHHHHHHHHCCCTTEEEEEESSCHHHHHHHHHHHHHCSSCC--CCBC-CCCSCCHHHHHHHHH
T ss_pred             CCCCceeEEeccCCCCchHHHHHHhhcCCceEEEEEeccChHHHHHHHHHHHhhhhhhcccccc-cccceeehhhhhhHH
Confidence             5699999999996 88888888888754 66665544459999999999987652  112222 234445432      


Q ss_pred             HHHhHHHHHHhhhCCCCCEEEEccCcchHHHHHHHHHHhcCCCCeE
Q 028618          160 HYETTGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKV  205 (206)
Q Consensus       160 g~~t~~~Ei~~q~~~~~d~vv~~vG~Gg~~aGi~~~~k~~~p~~~v  205 (206)
                      .|-+....+.....+++=.++||+|+-|.+.+-+.+.+.-.|=-|+
T Consensus       252 yYf~ay~q~~~~~~~~~v~f~VPTGNfGni~Ag~~Ak~MGLPI~kl  297 (511)
T d1kl7a_         252 YYFYSFFQATNGKDSKKVKFVVPSGNFGDILAGYFAKKMGLPIEKL  297 (511)
T ss_dssp             HHHHHHHHHHSSSSCCCEEEEEECSSSHHHHHHHHHHHHTCCCCCE
T ss_pred             HHHHHHHHHhhhccCCeeEEEeccCcHHHHHHHHHHHhcCCChheE
Confidence            2222222332222234557999999999998887776654454444

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=96.76  E-value=0.03  Score=39.74  Aligned_cols=61  Identities=23%  Similarity=0.231  Sum_probs=46.2

Q ss_pred             HHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCC
Q 028618           60 AEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDP  124 (206)
Q Consensus        60 a~~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~  124 (206)
                      +.++..+++|++.+|. .+|.-|+..+..++.+|.+++++-   ..+.|++..+.+|++......
T Consensus        18 a~~~~~~~~g~~vlV~-G~G~vG~~~~~~ak~~Ga~vi~v~---~~~~r~~~a~~~ga~~~~~~~   78 (170)
T d1e3ja2          18 ACRRAGVQLGTTVLVI-GAGPIGLVSVLAAKAYGAFVVCTA---RSPRRLEVAKNCGADVTLVVD   78 (170)
T ss_dssp             HHHHHTCCTTCEEEEE-CCSHHHHHHHHHHHHTTCEEEEEE---SCHHHHHHHHHTTCSEEEECC
T ss_pred             HHHHhCCCCCCEEEEE-cccccchhhHhhHhhhcccccccc---hHHHHHHHHHHcCCcEEEecc
Confidence            3344457788666665 578999999999999999866663   466889999999997766543

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.66  E-value=0.057  Score=38.33  Aligned_cols=72  Identities=22%  Similarity=0.256  Sum_probs=51.9

Q ss_pred             HHHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHH
Q 028618           59 DAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQ  133 (206)
Q Consensus        59 ~a~~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~  133 (206)
                      .+.++..+++|+.. +....|.-|...+..++.+|.+-++++.  ..+.|++..+.+|++.+....+.+..+..+
T Consensus        17 ~a~~~~~~~~gd~V-lI~G~G~iG~~~~~~a~~~G~~~Vi~~d--~~~~rl~~a~~~Ga~~~~~~~~~~~~~~~~   88 (171)
T d1pl8a2          17 HACRRGGVTLGHKV-LVCGAGPIGMVTLLVAKAMGAAQVVVTD--LSATRLSKAKEIGADLVLQISKESPQEIAR   88 (171)
T ss_dssp             HHHHHHTCCTTCEE-EEECCSHHHHHHHHHHHHTTCSEEEEEE--SCHHHHHHHHHTTCSEEEECSSCCHHHHHH
T ss_pred             HHHHHhCCCCCCEE-EEECCCccHHHHHHHHHHcCCceEEecc--CCHHHHHHHHHhCCcccccccccccccccc
Confidence            34455667888654 4456799999999999999996555543  457889999999998887776543333333

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=96.61  E-value=0.0076  Score=43.72  Aligned_cols=62  Identities=19%  Similarity=0.237  Sum_probs=52.3

Q ss_pred             HcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCC
Q 028618           62 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAK  126 (206)
Q Consensus        62 ~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~  126 (206)
                      +.+.+++|+..+|.+.+|.-|.++...|+..|.+++.++.   ++++.+.++.+|++.+....+.
T Consensus        23 ~~~~v~~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~---~~~~~~~~~~~Ga~~vi~~~~~   84 (182)
T d1v3va2          23 EVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAG---SDEKIAYLKQIGFDAAFNYKTV   84 (182)
T ss_dssp             TTTCCCSSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHTTCSEEEETTSC
T ss_pred             HHhCCCCCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCC---CHHHHHHHHhhhhhhhcccccc
Confidence            4566788888888899999999999999999999888864   4578999999999887766554

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=96.25  E-value=0.0094  Score=42.87  Aligned_cols=61  Identities=23%  Similarity=0.176  Sum_probs=49.3

Q ss_pred             HcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCC
Q 028618           62 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPA  125 (206)
Q Consensus        62 ~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~  125 (206)
                      +.+.++||++.+|.+.+|.-|.++...|+..|.++++...   ++.|.+.++.+||+-++-..+
T Consensus        22 ~~~~l~~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~---s~~k~~~~~~lGa~~vi~~~~   82 (179)
T d1qora2          22 KTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVG---TAQKAQSALKAGAWQVINYRE   82 (179)
T ss_dssp             TTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEES---SHHHHHHHHHHTCSEEEETTT
T ss_pred             HHhCCCCCCEEEEEccccccchHHHHHHHHhCCeEeeccc---chHHHHHHHhcCCeEEEECCC
Confidence            4567888877778888899999999999999998777744   467888899999987665444

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.19  E-value=0.023  Score=40.26  Aligned_cols=59  Identities=20%  Similarity=0.209  Sum_probs=45.3

Q ss_pred             CCCCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCC
Q 028618           64 GLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAK  126 (206)
Q Consensus        64 g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~  126 (206)
                      ..+++|++.+| ..+|.-|...+..++.+|.+++++   ...+.|++..+.+|++.+....+.
T Consensus        23 ~~~~~g~~VlV-~GaG~vG~~~~~~ak~~G~~Vi~~---~~~~~~~~~a~~~Ga~~~i~~~~~   81 (166)
T d1llua2          23 TNARPGQWVAI-SGIGGLGHVAVQYARAMGLHVAAI---DIDDAKLELARKLGASLTVNARQE   81 (166)
T ss_dssp             HTCCTTCEEEE-ECCSHHHHHHHHHHHHTTCEEEEE---ESCHHHHHHHHHTTCSEEEETTTS
T ss_pred             hCCCCCCEEEE-eeccccHHHHHHHHHHcCCcccee---cchhhHHHhhhccCccccccccch
Confidence            34677766555 567999999999999999886666   345788899999999877655543

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=96.08  E-value=0.0089  Score=37.54  Aligned_cols=62  Identities=15%  Similarity=0.230  Sum_probs=47.0

Q ss_pred             HHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCC
Q 028618           53 GYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGA  117 (206)
Q Consensus        53 a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga  117 (206)
                      |+..+....+.+...++++.+|...+|.-|....-.|+.+|.++++....   ++|.+.++.+||
T Consensus        16 A~~al~~~~~~~~~~~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s---~~k~~~~~~lGA   77 (77)
T d1o8ca2          16 AMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGR---ESTHEYLKSLGA   77 (77)
T ss_dssp             HHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESC---GGGHHHHHHHTE
T ss_pred             HHHHHHHHHhhhhccCCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECC---HHHHHHHHHCCC
Confidence            33334445566666777788888999999999999999999998887653   366777787875

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.03  E-value=0.03  Score=40.04  Aligned_cols=62  Identities=26%  Similarity=0.312  Sum_probs=48.7

Q ss_pred             HHcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCC
Q 028618           61 EAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPA  125 (206)
Q Consensus        61 ~~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~  125 (206)
                      .+.+.+++|++.+|.+.+|.-|.+....|+.+|+++++.+.   ++.+++.++.+|++-++-..+
T Consensus        21 ~~~~~~~~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~---~~~~~~~~~~~Ga~~vi~~~~   82 (174)
T d1yb5a2          21 IHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAG---TEEGQKIVLQNGAHEVFNHRE   82 (174)
T ss_dssp             HTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHTTCSEEEETTS
T ss_pred             HHHhCCCCCCEEEEEeccccccccccccccccCcccccccc---cccccccccccCccccccccc
Confidence            35566888877777777799999999999999999877764   357889999999976654443

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=95.97  E-value=0.045  Score=38.49  Aligned_cols=58  Identities=24%  Similarity=0.261  Sum_probs=46.1

Q ss_pred             CCCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCC
Q 028618           65 LITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAK  126 (206)
Q Consensus        65 ~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~  126 (206)
                      .++||++.+| ..+|.-|...+..++..|.+++++   +.++.|++.++.+|++.+....+.
T Consensus        24 ~~~~g~~vlv-~G~G~iG~~a~~~a~~~g~~v~~~---~~~~~r~~~~k~~Ga~~~~~~~~~   81 (168)
T d1rjwa2          24 GAKPGEWVAI-YGIGGLGHVAVQYAKAMGLNVVAV---DIGDEKLELAKELGADLVVNPLKE   81 (168)
T ss_dssp             TCCTTCEEEE-ECCSTTHHHHHHHHHHTTCEEEEE---CSCHHHHHHHHHTTCSEEECTTTS
T ss_pred             CCCCCCEEEE-eecccchhhhhHHHhcCCCeEecc---CCCHHHhhhhhhcCcceecccccc
Confidence            3677766555 456999999999999999986655   446788999999999988877664

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=95.71  E-value=0.016  Score=41.66  Aligned_cols=59  Identities=27%  Similarity=0.361  Sum_probs=46.3

Q ss_pred             HHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEE
Q 028618           60 AEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVL  121 (206)
Q Consensus        60 a~~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~  121 (206)
                      +.++..++||++.+|.+.+|.-|++....|+.+|.+++++...   +.+++.++.+|++.+.
T Consensus        19 al~~~~~~~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~---~~~~~~~~~lGa~~~i   77 (171)
T d1iz0a2          19 ALKRAQARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASR---PEKLALPLALGAEEAA   77 (171)
T ss_dssp             HHHHTTCCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESS---GGGSHHHHHTTCSEEE
T ss_pred             HHHHhCCCCCCEEEEEeccccchhhhhhhhccccccccccccc---ccccccccccccceee
Confidence            3445667888777777778999999999999999987777643   4577888899997665

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=95.68  E-value=0.11  Score=37.06  Aligned_cols=74  Identities=19%  Similarity=0.214  Sum_probs=50.8

Q ss_pred             HcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHH
Q 028618           62 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEI  138 (206)
Q Consensus        62 ~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~  138 (206)
                      +.+.+++|++.+|. .+|..|......|+.+|.+-++++  +.++.+++.++.+|++.+....+....+..+...+.
T Consensus        22 ~~~~~~~G~~VlV~-GaG~iG~~~~~~ak~~Ga~~Vi~~--~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~   95 (182)
T d1vj0a2          22 EYPESFAGKTVVIQ-GAGPLGLFGVVIARSLGAENVIVI--AGSPNRLKLAEEIGADLTLNRRETSVEERRKAIMDI   95 (182)
T ss_dssp             TCSSCCBTCEEEEE-CCSHHHHHHHHHHHHTTBSEEEEE--ESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHHH
T ss_pred             HHhCCCCCCEEEEE-CCCccchhheeccccccccccccc--ccccccccccccccceEEEeccccchHHHHHHHHHh
Confidence            55677888665565 568999999999999998533333  236778899999999777665554344444444433

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=95.67  E-value=0.0074  Score=44.16  Aligned_cols=62  Identities=19%  Similarity=0.202  Sum_probs=49.6

Q ss_pred             HcCCCCCCCeEEEe-eCCCchHHHHHHHHHHCCCcEEEEeCCCC-CHHHHHHHHHcCCEEEEeC
Q 028618           62 AKGLITPGESVLIE-PTSGNTGIGLAFMAAAKQYRLIITMPASM-SLERRIILRAFGAELVLTD  123 (206)
Q Consensus        62 ~~g~~~~~~~~vv~-aSsGN~g~alA~~a~~~g~~~~ivvp~~~-~~~~~~~~~~~Ga~v~~~~  123 (206)
                      +.+.++||++.+|. +.+|.-|.+....|+.+|.++++++.... .+.+.+.++.+|++.+...
T Consensus        22 ~~~~~~~g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lGad~vi~~   85 (189)
T d1gu7a2          22 HYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITE   85 (189)
T ss_dssp             SSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEEEH
T ss_pred             HHhCCCCCCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhccccEEEec
Confidence            45668888666664 67788999999999999999999986654 4677888999999887754

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.41  E-value=0.042  Score=39.29  Aligned_cols=61  Identities=30%  Similarity=0.422  Sum_probs=49.0

Q ss_pred             HcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCC
Q 028618           62 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPA  125 (206)
Q Consensus        62 ~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~  125 (206)
                      +.+.+++|++.+|.+.+|..|..+.-.|+.+|.++++.+.   ++.+.+.++.+|++-+....+
T Consensus        19 ~~~~~~~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~---~~~~~~~l~~~Ga~~vi~~~~   79 (183)
T d1pqwa_          19 EVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAG---SDAKREMLSRLGVEYVGDSRS   79 (183)
T ss_dssp             TTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEES---SHHHHHHHHTTCCSEEEETTC
T ss_pred             HHhCCCCCCEEEEECCCCCcccccchhhccccccceeeec---ccccccccccccccccccCCc
Confidence            5566788877777777899999999999999999888864   357788999999987665444

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=95.25  E-value=0.021  Score=41.01  Aligned_cols=67  Identities=22%  Similarity=0.268  Sum_probs=52.4

Q ss_pred             HHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEE
Q 028618           52 IGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVL  121 (206)
Q Consensus        52 ~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~  121 (206)
                      .|+..+..+.+.|...+++..+|.+.+|--|.+..-.|+.+|.+++..+...   .|.+.++.+|++.+.
T Consensus         7 TA~~a~~~L~~~g~~~~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~---~k~~~~~~lGad~vi   73 (167)
T d1tt7a2           7 TAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNR---EAADYLKQLGASEVI   73 (167)
T ss_dssp             HHHHHHHHHHHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSS---STHHHHHHHTCSEEE
T ss_pred             HHHHHHHHHHHhcCCCCCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCH---HHHHHHHhhcccceE
Confidence            3444445566777766666788888899999999999999999999887754   467778899998875

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=95.23  E-value=0.13  Score=37.40  Aligned_cols=64  Identities=19%  Similarity=0.209  Sum_probs=48.2

Q ss_pred             HHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCC
Q 028618           60 AEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAK  126 (206)
Q Consensus        60 a~~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~  126 (206)
                      +.++..+++|++.+| ...|.-|...+..++.+|...++++.  ..+.|++..+.+|++.+..+.+.
T Consensus        17 a~~~a~v~~G~tVlV-~GaG~vGl~a~~~ak~~ga~~Vi~~d--~~~~rl~~a~~~Ga~~~~~~~~~   80 (195)
T d1kola2          17 GAVTAGVGPGSTVYV-AGAGPVGLAAAASARLLGAAVVIVGD--LNPARLAHAKAQGFEIADLSLDT   80 (195)
T ss_dssp             HHHHTTCCTTCEEEE-ECCSHHHHHHHHHHHHTTCSEEEEEE--SCHHHHHHHHHTTCEEEETTSSS
T ss_pred             HHHHhCCCCCCEEEE-ECcCHHHHHHHHHHHhhcccceeeec--ccchhhHhhhhccccEEEeCCCc
Confidence            344556788865545 56789999999999999987666653  35788999999999987765543

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=95.19  E-value=0.1  Score=36.71  Aligned_cols=64  Identities=22%  Similarity=0.224  Sum_probs=47.7

Q ss_pred             HHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCC
Q 028618           60 AEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPA  125 (206)
Q Consensus        60 a~~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~  125 (206)
                      +.++..++++++.+|.+.+|..|..++..++..|...++++..  .+.|++.++.+|++.+....+
T Consensus        19 al~~~~~~~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~--~~~~~~~~~~~Ga~~~i~~~~   82 (170)
T d1jvba2          19 AVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDV--REEAVEAAKRAGADYVINASM   82 (170)
T ss_dssp             HHHHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEES--SHHHHHHHHHHTCSEEEETTT
T ss_pred             HHHHhCCCCCCEEEEEeccccceeeeeeccccccccccccccc--chhhHHHHHHcCCceeeccCC
Confidence            3444567888776776667999999999999999766666543  467889999999976655444

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=95.10  E-value=0.031  Score=40.44  Aligned_cols=69  Identities=16%  Similarity=0.229  Sum_probs=51.3

Q ss_pred             HHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeC
Q 028618           52 IGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTD  123 (206)
Q Consensus        52 ~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~  123 (206)
                      .|+..+....+.|....++..+|.+.+|.-|.+..-.|+.+|.+++++...   +.|.+.++.+||+.+.-.
T Consensus        15 TA~~a~~~l~~~g~~~~~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~---~~k~~~~~~lGad~vi~~   83 (177)
T d1o89a2          15 TAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGR---ESTHEYLKSLGASRVLPR   83 (177)
T ss_dssp             HHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESC---GGGHHHHHHHTEEEEEEG
T ss_pred             HHHHHHHHHHHhCCCCCCCcEEEEEccccchHHHHHHHHHcCCCeEEEecc---hhHHHHHHhhcccccccc
Confidence            344444444556654444467888889999999999999999999988764   356777889999987654

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=95.02  E-value=0.035  Score=40.17  Aligned_cols=68  Identities=25%  Similarity=0.291  Sum_probs=54.4

Q ss_pred             HHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeC
Q 028618           53 GYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTD  123 (206)
Q Consensus        53 a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~  123 (206)
                      |+..+....+.|...+|++.+|.+.+|.-|.+.--.|+.+|.+++......   .|.+.++.+|++.+.-.
T Consensus        16 A~~a~~~L~~~g~~~~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~---~k~~~~~~lGa~~vi~~   83 (176)
T d1xa0a2          16 AALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKA---AEHDYLRVLGAKEVLAR   83 (176)
T ss_dssp             HHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCT---TCHHHHHHTTCSEEEEC
T ss_pred             HHHHHHHHHHhCCCCCCCEEEEEeccchHHHHHHHHHHHcCCceEEecCch---HHHHHHHhcccceeeec
Confidence            444555566778888887899999999999999999999999999987554   56778889999987654

>d1vp8a_ c.49.1.2 (A:) Hypothetical protein AF0103 {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: Pyruvate kinase C-terminal domain-like
superfamily: PK C-terminal domain-like
family: MTH1675-like
domain: Hypothetical protein AF0103
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=94.87  E-value=0.094  Score=37.92  Aligned_cols=77  Identities=18%  Similarity=0.244  Sum_probs=58.7

Q ss_pred             CCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCC---------CCCHHHHHHHH
Q 028618           43 EPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPA---------SMSLERRIILR  113 (206)
Q Consensus        43 ~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~---------~~~~~~~~~~~  113 (206)
                      +|.-.+-...+...+.+|.+.|.    +..+|.+|+|.++..++-+.  .|+++++|--.         ..+++.++.++
T Consensus        11 ~~G~~NT~~~l~~a~~rA~Elgi----~~iVvAStsG~TA~~~~e~~--~g~~lvvVth~~GF~~pg~~e~~~e~~~~L~   84 (190)
T d1vp8a_          11 KPGRENTEETLRLAVERAKELGI----KHLVVASSYGDTAMKALEMA--EGLEVVVVTYHTGFVREGENTMPPEVEEELR   84 (190)
T ss_dssp             SCSGGGHHHHHHHHHHHHHHHTC----CEEEEECSSSHHHHHHHHHC--TTCEEEEEECCTTSSSTTCCSSCHHHHHHHH
T ss_pred             CCCcccHHHHHHHHHHHHHHcCC----CeEEEEeCCcHHHHHHHHHh--cCCeEEEEecccCCCCCCcccCCHHHHHHHH
Confidence            45556778888889999999985    25666667899988877766  38888777521         34789999999


Q ss_pred             HcCCEEEEeCCC
Q 028618          114 AFGAELVLTDPA  125 (206)
Q Consensus       114 ~~Ga~v~~~~~~  125 (206)
                      ..|.+|+.-...
T Consensus        85 ~~G~~V~t~tH~   96 (190)
T d1vp8a_          85 KRGAKIVRQSHI   96 (190)
T ss_dssp             HTTCEEEECCCT
T ss_pred             HcCCEEEEeccc
Confidence            999999876543

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=94.46  E-value=0.097  Score=36.94  Aligned_cols=63  Identities=19%  Similarity=0.148  Sum_probs=47.1

Q ss_pred             HHHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCC
Q 028618           59 DAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPA  125 (206)
Q Consensus        59 ~a~~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~  125 (206)
                      .+.++..+++|++.+|. ..|.-|...+..|+.+|.+.+++...   +.+++..+.+|++.+....+
T Consensus        21 ~al~~~~~~~G~~VlI~-GaG~vG~~a~qlak~~Ga~~i~~~~~---~~~~~~a~~lGad~~i~~~~   83 (168)
T d1uufa2          21 SPLRHWQAGPGKKVGVV-GIGGLGHMGIKLAHAMGAHVVAFTTS---EAKREAAKALGADEVVNSRN   83 (168)
T ss_dssp             HHHHHTTCCTTCEEEEE-CCSHHHHHHHHHHHHTTCEEEEEESS---GGGHHHHHHHTCSEEEETTC
T ss_pred             HHHHHhCCCCCCEEEEe-ccchHHHHHHHHhhcccccchhhccc---hhHHHHHhccCCcEEEECch
Confidence            34456678888766665 56889999999999999998765443   34677889999987765543

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=94.34  E-value=0.15  Score=36.42  Aligned_cols=63  Identities=19%  Similarity=0.067  Sum_probs=46.6

Q ss_pred             HHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCC
Q 028618           60 AEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPA  125 (206)
Q Consensus        60 a~~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~  125 (206)
                      +.+...+++|+..+| ...|--|...+..|+.+|.+-++++.  ..+.|++..+.+||+-++...+
T Consensus        19 a~~~a~~~~g~~VlI-~GaG~vGl~~~q~ak~~Ga~~Vi~~d--~~~~r~~~a~~lGa~~~i~~~~   81 (174)
T d1jqba2          19 GAELADIEMGSSVVV-IGIGAVGLMGIAGAKLRGAGRIIGVG--SRPICVEAAKFYGATDILNYKN   81 (174)
T ss_dssp             HHHHTTCCTTCCEEE-ECCSHHHHHHHHHHHTTTCSCEEEEC--CCHHHHHHHHHHTCSEEECGGG
T ss_pred             HHHHhCCCCCCEEEE-EcCCcchhhhhhhhhccccccccccc--chhhhHHHHHhhCccccccccc
Confidence            455667888876666 56799999999999999985444443  3578899999999976654433

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=94.25  E-value=0.22  Score=37.64  Aligned_cols=56  Identities=16%  Similarity=0.190  Sum_probs=35.5

Q ss_pred             CCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCC--HHHHHHHHHcCCEEEEeCC
Q 028618           69 GESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS--LERRIILRAFGAELVLTDP  124 (206)
Q Consensus        69 ~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~--~~~~~~~~~~Ga~v~~~~~  124 (206)
                      |+..+|+.+++.-|+++|....+.|.++++.-.....  ....+..+.+|.+++.+..
T Consensus         5 gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~   62 (251)
T d1vl8a_           5 GRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRC   62 (251)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEEC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEc
Confidence            3478899999999999999988888876666432211  1112233455666555433

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=94.17  E-value=0.2  Score=38.42  Aligned_cols=32  Identities=13%  Similarity=0.190  Sum_probs=25.5

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHCCCcEEEEeC
Q 028618           70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMP  101 (206)
Q Consensus        70 ~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp  101 (206)
                      +..+|+.++|.-|.++|......|.++++.-.
T Consensus        26 K~alITGas~GIG~aiA~~la~~Ga~Vii~~r   57 (294)
T d1w6ua_          26 KVAFITGGGTGLGKGMTTLLSSLGAQCVIASR   57 (294)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEEC
Confidence            47889999998999999888788877666643

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.10  E-value=0.08  Score=37.45  Aligned_cols=59  Identities=17%  Similarity=0.137  Sum_probs=43.3

Q ss_pred             HHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEe
Q 028618           60 AEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLT  122 (206)
Q Consensus        60 a~~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~  122 (206)
                      +.++..+++|++.+| ...|..|...+..++.+|.+++++-..   +.|++..+.+||+-+..
T Consensus        19 al~~~~~~~g~~vlI-~GaG~vG~~a~q~ak~~G~~vi~~~~~---~~k~~~a~~lGa~~~i~   77 (168)
T d1piwa2          19 PLVRNGCGPGKKVGI-VGLGGIGSMGTLISKAMGAETYVISRS---SRKREDAMKMGADHYIA   77 (168)
T ss_dssp             HHHHTTCSTTCEEEE-ECCSHHHHHHHHHHHHHTCEEEEEESS---STTHHHHHHHTCSEEEE
T ss_pred             HHHHhCcCCCCEEEE-ECCCCcchhHHHHhhhccccccccccc---hhHHHHhhccCCcEEee
Confidence            333445788866555 456999999999999999997766443   35778889999975544

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=94.08  E-value=0.16  Score=35.96  Aligned_cols=62  Identities=19%  Similarity=0.224  Sum_probs=46.7

Q ss_pred             HHcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCC
Q 028618           61 EAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPA  125 (206)
Q Consensus        61 ~~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~  125 (206)
                      .+.+.++||+..+| ...|--|...+..|+.+|.+.+++...  .+.|++..+.+|++-++-..+
T Consensus        21 ~~~~~~~~g~~VlI-~G~G~iG~~~~~~ak~~g~~~v~~~~~--~~~k~~~a~~~Ga~~~i~~~~   82 (174)
T d1f8fa2          21 INALKVTPASSFVT-WGAGAVGLSALLAAKVCGASIIIAVDI--VESRLELAKQLGATHVINSKT   82 (174)
T ss_dssp             HTTTCCCTTCEEEE-ESCSHHHHHHHHHHHHHTCSEEEEEES--CHHHHHHHHHHTCSEEEETTT
T ss_pred             HHhhCCCCCCEEEE-eCCCHHHhhhhhcccccccceeeeecc--HHHHHHHHHHcCCeEEEeCCC
Confidence            45566888866555 566999999999999999988777643  568899999999865544433

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=93.95  E-value=0.17  Score=36.38  Aligned_cols=71  Identities=8%  Similarity=0.163  Sum_probs=48.6

Q ss_pred             HHHHHHHHHHHcCCCCCC--CeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCC
Q 028618           52 IGYSMISDAEAKGLITPG--ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAK  126 (206)
Q Consensus        52 ~a~~~~~~a~~~g~~~~~--~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~  126 (206)
                      .|+..+...   +.+++|  +..+|.+.+|.-|....-.|+.+|.+.++.+... ++.+....+.+|++.+.-..+.
T Consensus        15 TA~~~l~~~---~~~~~G~~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~-~e~~~~l~~~~gad~vi~~~~~   87 (187)
T d1vj1a2          15 TSLIGVQEK---GHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGT-QEKCLFLTSELGFDAAVNYKTG   87 (187)
T ss_dssp             HHHHHHHHH---SCCCTTSCCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESS-HHHHHHHHHHSCCSEEEETTSS
T ss_pred             HHHHHHHHH---hCCCCCCCCEEEEECCCchhhHHHHHHHHHcCCcceecccch-HHHHhhhhhcccceEEeeccch
Confidence            444444433   345555  4567777789999999999999999877765442 3344445568999988776654

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.49  E-value=0.45  Score=35.85  Aligned_cols=31  Identities=16%  Similarity=0.224  Sum_probs=24.0

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHCCCcEEEEe
Q 028618           70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITM  100 (206)
Q Consensus        70 ~~~vv~aSsGN~g~alA~~a~~~g~~~~ivv  100 (206)
                      +..+|+..++--|.++|....+.|.++++.-
T Consensus        11 Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~   41 (257)
T d1xg5a_          11 RLALVTGASGGIGAAVARALVQQGLKVVGCA   41 (257)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEE
Confidence            4678888888888888888888887765554

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=93.40  E-value=0.64  Score=35.01  Aligned_cols=73  Identities=14%  Similarity=-0.017  Sum_probs=46.4

Q ss_pred             CCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCC-HHHHHHHHHcCCEEEEeCCCCC-hHHHHHHHHHHHHh
Q 028618           69 GESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVLTDPAKG-MKGAVQKAEEILAK  141 (206)
Q Consensus        69 ~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~-~~~~~~~~~~Ga~v~~~~~~~~-~~~~~~~a~~~~~~  141 (206)
                      |+..+|+..++.-|.++|....+.|.++++.-..... +...+.++..|.+++....|-. .++..+...+..++
T Consensus         6 gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~   80 (258)
T d1ae1a_           6 GTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHV   80 (258)
T ss_dssp             TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHH
Confidence            4578999999999999999999999987777654211 2334566777776655543321 23333334444444

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=93.29  E-value=0.52  Score=35.47  Aligned_cols=57  Identities=14%  Similarity=0.257  Sum_probs=35.6

Q ss_pred             CCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCH---HHHHHHHHcCCEEEEeCCC
Q 028618           69 GESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSL---ERRIILRAFGAELVLTDPA  125 (206)
Q Consensus        69 ~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~---~~~~~~~~~Ga~v~~~~~~  125 (206)
                      |+..+|+..++.-|.++|......|.++++.-......   ...+.....|.++..+..|
T Consensus         4 gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~D   63 (260)
T d1x1ta1           4 GKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGAD   63 (260)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCC
T ss_pred             cCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECC
Confidence            34678888888899999988888888766654332111   1111224456666666544

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=92.84  E-value=0.46  Score=33.29  Aligned_cols=69  Identities=16%  Similarity=0.201  Sum_probs=47.4

Q ss_pred             HHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCC
Q 028618           52 IGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPA  125 (206)
Q Consensus        52 ~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~  125 (206)
                      .+++.+.++..  .++||+. ++...+|.-|...+..++.+|...++++..  ++.|++.++.+|++-+....+
T Consensus        18 Ta~~al~~~~~--~~~~g~~-vli~GaG~vG~~~~~~a~~~g~~~vv~~~~--~~~k~~~~~~~ga~~~i~~~~   86 (172)
T d1h2ba2          18 TAYRAVKKAAR--TLYPGAY-VAIVGVGGLGHIAVQLLKVMTPATVIALDV--KEEKLKLAERLGADHVVDARR   86 (172)
T ss_dssp             HHHHHHHHHHT--TCCTTCE-EEEECCSHHHHHHHHHHHHHCCCEEEEEES--SHHHHHHHHHTTCSEEEETTS
T ss_pred             HHHHHHHHhhh--ccCCCCE-EEEeCCChHHHHHHHHHHhhcCcccccccc--hhHHHHHHhhcccceeecCcc
Confidence            34455544322  2566655 455667999999999999999877666533  467899999999976665543

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=92.75  E-value=0.48  Score=35.74  Aligned_cols=57  Identities=18%  Similarity=0.133  Sum_probs=37.2

Q ss_pred             CCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCC-CHHHHHHHHHcCCEEEEeCCC
Q 028618           69 GESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASM-SLERRIILRAFGAELVLTDPA  125 (206)
Q Consensus        69 ~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~-~~~~~~~~~~~Ga~v~~~~~~  125 (206)
                      |+..+|+..++.-|+++|......|.++++.-.... -....+.++..|.+++.+..|
T Consensus         5 gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~D   62 (260)
T d1zema1           5 GKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCD   62 (260)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcc
Confidence            347889999999999999998888887666543211 112233456667666655443

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=92.47  E-value=0.56  Score=35.22  Aligned_cols=30  Identities=7%  Similarity=0.211  Sum_probs=22.5

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHCCCcEEEE
Q 028618           70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIIT   99 (206)
Q Consensus        70 ~~~vv~aSsGN~g~alA~~a~~~g~~~~iv   99 (206)
                      +..+|+..++--|.++|......|.++++.
T Consensus         7 K~alITGas~GIG~aia~~la~~Ga~V~~~   36 (253)
T d1hxha_           7 KVALVTGGASGVGLEVVKLLLGEGAKVAFS   36 (253)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEE
Confidence            467888888888888887777777765443

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=92.45  E-value=0.66  Score=34.94  Aligned_cols=32  Identities=13%  Similarity=0.043  Sum_probs=24.9

Q ss_pred             CCeEEEeeCCCchHHHHHHHHHHCCCcEEEEe
Q 028618           69 GESVLIEPTSGNTGIGLAFMAAAKQYRLIITM  100 (206)
Q Consensus        69 ~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivv  100 (206)
                      |+..+|+..++.-|.++|......|.++++.-
T Consensus         8 gK~alVTGas~GIG~aiA~~la~~Ga~V~~~~   39 (259)
T d1xq1a_           8 AKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCA   39 (259)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEE
Confidence            45788888888899999888887777665554

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=92.36  E-value=0.62  Score=35.06  Aligned_cols=32  Identities=25%  Similarity=0.195  Sum_probs=25.8

Q ss_pred             CCeEEEeeCCCchHHHHHHHHHHCCCcEEEEe
Q 028618           69 GESVLIEPTSGNTGIGLAFMAAAKQYRLIITM  100 (206)
Q Consensus        69 ~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivv  100 (206)
                      |+..+|+..++.-|+++|......|.++++.-
T Consensus         4 gK~alITGas~GIG~aia~~la~~Ga~V~i~~   35 (258)
T d1iy8a_           4 DRVVLITGGGSGLGRATAVRLAAEGAKLSLVD   35 (258)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEE
Confidence            34788888999999999999888888766654

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=92.24  E-value=0.96  Score=33.94  Aligned_cols=57  Identities=14%  Similarity=0.031  Sum_probs=38.4

Q ss_pred             CCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCC-CHHHHHHHHHcCCEEEEeCCC
Q 028618           69 GESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASM-SLERRIILRAFGAELVLTDPA  125 (206)
Q Consensus        69 ~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~-~~~~~~~~~~~Ga~v~~~~~~  125 (206)
                      |+..+|+..++--|+++|......|.++++.-.... -....+.++..|.++..+..|
T Consensus         8 GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~D   65 (259)
T d2ae2a_           8 GCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCD   65 (259)
T ss_dssp             TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEee
Confidence            457899999999999999999999988766643211 112234456667766655443

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=91.72  E-value=0.4  Score=36.52  Aligned_cols=53  Identities=21%  Similarity=0.173  Sum_probs=36.2

Q ss_pred             CCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHH-HHHHHcCCEEEEeCC
Q 028618           69 GESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERR-IILRAFGAELVLTDP  124 (206)
Q Consensus        69 ~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~-~~~~~~Ga~v~~~~~  124 (206)
                      |+..+|+..++.-|+++|......|.++++.-..   +.++ +..+.+|.++..+..
T Consensus         5 gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~---~~~l~~~~~~~~~~~~~~~~   58 (276)
T d1bdba_           5 GEAVLITGGASGLGRALVDRFVAEGAKVAVLDKS---AERLAELETDHGDNVLGIVG   58 (276)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHGGGEEEEEC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHHcCCCeeEEec
Confidence            3478999999999999999999889887776432   2333 333455655555543

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=91.70  E-value=0.31  Score=34.64  Aligned_cols=60  Identities=20%  Similarity=0.159  Sum_probs=46.6

Q ss_pred             HHcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeC
Q 028618           61 EAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTD  123 (206)
Q Consensus        61 ~~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~  123 (206)
                      .+...+++|++ ++....|--|+..+..++.+|.+.+++...  ++.|++..+.+|++.+.-.
T Consensus        21 ~~~a~v~~G~~-VlV~G~G~iGl~a~~~ak~~Ga~~Vi~~d~--~~~r~~~a~~~Ga~~~i~~   80 (174)
T d1e3ia2          21 INTAKVTPGST-CAVFGLGCVGLSAIIGCKIAGASRIIAIDI--NGEKFPKAKALGATDCLNP   80 (174)
T ss_dssp             HTTSCCCTTCE-EEEECCSHHHHHHHHHHHHTTCSEEEEECS--CGGGHHHHHHTTCSEEECG
T ss_pred             HHhhCCCCCCE-EEEECCChHHHHHHHHHHHhCCceeeeecc--chHHHHHHHHhCCCcccCC
Confidence            35667888865 455578999999999999999877777654  4467899999999876643

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=91.60  E-value=0.44  Score=35.59  Aligned_cols=61  Identities=20%  Similarity=0.162  Sum_probs=46.0

Q ss_pred             CCCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCC-----CCCHHHHHHHHHcCCEEEEeCCC
Q 028618           65 LITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPA-----SMSLERRIILRAFGAELVLTDPA  125 (206)
Q Consensus        65 ~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~-----~~~~~~~~~~~~~Ga~v~~~~~~  125 (206)
                      .++|+.+.+|+..+|--|.++|....+.|.+.++++..     ......++.++..|+++..+..|
T Consensus         5 ~~~p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~D   70 (259)
T d2fr1a1           5 EWKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACD   70 (259)
T ss_dssp             CCCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECC
T ss_pred             ccCCcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccc
Confidence            35677788999999999999999999999875555532     22344566778899998887665

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=91.43  E-value=1.1  Score=33.37  Aligned_cols=55  Identities=11%  Similarity=0.097  Sum_probs=35.9

Q ss_pred             eEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCC-CHHHHHHHHHcCCEEEEeCCC
Q 028618           71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASM-SLERRIILRAFGAELVLTDPA  125 (206)
Q Consensus        71 ~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~-~~~~~~~~~~~Ga~v~~~~~~  125 (206)
                      ..+|+.+++--|+++|....+.|.++++.-.... -....+.++..|.+++.+..|
T Consensus         3 ValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~D   58 (255)
T d1gega_           3 VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVD   58 (255)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             EEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEee
Confidence            3588888889999999988888888766543221 112234456667666655443

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=90.90  E-value=1.2  Score=33.38  Aligned_cols=32  Identities=16%  Similarity=0.173  Sum_probs=23.9

Q ss_pred             CCeEEEeeCCCchHHHHHHHHHHCCCcEEEEe
Q 028618           69 GESVLIEPTSGNTGIGLAFMAAAKQYRLIITM  100 (206)
Q Consensus        69 ~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivv  100 (206)
                      |+..+|+..++--|+++|......|.++++.-
T Consensus         6 gKvalITGas~GIG~aia~~la~~Ga~V~i~~   37 (268)
T d2bgka1           6 DKVAIITGGAGGIGETTAKLFVRYGAKVVIAD   37 (268)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEE
Confidence            34778888888889998888877776655543

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.75  E-value=1.9  Score=32.07  Aligned_cols=31  Identities=19%  Similarity=0.328  Sum_probs=26.3

Q ss_pred             CCeEEEeeCCCchHHHHHHHHHHCCCcEEEE
Q 028618           69 GESVLIEPTSGNTGIGLAFMAAAKQYRLIIT   99 (206)
Q Consensus        69 ~~~~vv~aSsGN~g~alA~~a~~~g~~~~iv   99 (206)
                      |+..+|+..++.-|.++|......|.++++.
T Consensus         6 GK~alITGas~GIG~aia~~la~~Ga~V~i~   36 (250)
T d1ydea1           6 GKVVVVTGGGRGIGAGIVRAFVNSGARVVIC   36 (250)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEE
Confidence            4578999999999999999998889887665

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.10  E-value=0.81  Score=34.20  Aligned_cols=33  Identities=15%  Similarity=0.125  Sum_probs=26.4

Q ss_pred             CCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeC
Q 028618           69 GESVLIEPTSGNTGIGLAFMAAAKQYRLIITMP  101 (206)
Q Consensus        69 ~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp  101 (206)
                      |+..+||.+++--|+++|......|.++++.-.
T Consensus         3 GKvalITGas~GIG~aia~~la~~Ga~V~i~~r   35 (254)
T d2gdza1           3 GKVALVTGAAQGIGRAFAEALLLKGAKVALVDW   35 (254)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC
Confidence            447889998888999999988888887666543

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=89.88  E-value=2.3  Score=31.67  Aligned_cols=42  Identities=7%  Similarity=0.126  Sum_probs=31.9

Q ss_pred             CCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHH
Q 028618           69 GESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRI  110 (206)
Q Consensus        69 ~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~  110 (206)
                      |+..+||.+++--|.++|..-...|.+++++...........
T Consensus         5 gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~   46 (254)
T d1sbya1           5 NKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALA   46 (254)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHH
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHH
Confidence            347788888888899999988889999888876654444433

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=89.79  E-value=0.52  Score=35.37  Aligned_cols=74  Identities=16%  Similarity=0.178  Sum_probs=52.1

Q ss_pred             CCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCC--HHHHHHHHHcCCEEEEeCCCCC-hHHHHHHHHHHHHhC
Q 028618           69 GESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS--LERRIILRAFGAELVLTDPAKG-MKGAVQKAEEILAKT  142 (206)
Q Consensus        69 ~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~--~~~~~~~~~~Ga~v~~~~~~~~-~~~~~~~a~~~~~~~  142 (206)
                      |+..+|+..++--|.++|....+.|.++++....+..  +...+.++..|.+++.+..|-. .++..+...+..++.
T Consensus         6 GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~   82 (259)
T d1ja9a_           6 GKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHF   82 (259)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHc
Confidence            4578888888999999999999999998876655432  3336677889998887765532 344445455555554

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=89.67  E-value=3.4  Score=31.61  Aligned_cols=56  Identities=14%  Similarity=0.080  Sum_probs=42.6

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCC
Q 028618           70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPA  125 (206)
Q Consensus        70 ~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~  125 (206)
                      ++.+|+.++|..|.+++-.....|.++++++....+.........-|++++..+..
T Consensus         4 ktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~v~~~~gD~~   59 (350)
T d1xgka_           4 KTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLL   59 (350)
T ss_dssp             CCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCT
T ss_pred             CEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhhhhhcccCCCEEEEeeCC
Confidence            36889999999999999999999999999997655544333334457787766543

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=89.57  E-value=0.45  Score=33.66  Aligned_cols=60  Identities=18%  Similarity=0.167  Sum_probs=46.2

Q ss_pred             HHcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeC
Q 028618           61 EAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTD  123 (206)
Q Consensus        61 ~~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~  123 (206)
                      .+.+.+++|+..+|. ..|--|......|+.+|...++.+..  .+.|++..+.+||+-+.-.
T Consensus        20 ~~~a~~~~G~~VlV~-GaGgvGl~a~~~ak~~G~~~Vi~~d~--~~~kl~~a~~lGa~~~i~~   79 (174)
T d1p0fa2          20 VNTAKVTPGSTCAVF-GLGGVGFSAIVGCKAAGASRIIGVGT--HKDKFPKAIELGATECLNP   79 (174)
T ss_dssp             HTTTCCCTTCEEEEE-CCSHHHHHHHHHHHHHTCSEEEEECS--CGGGHHHHHHTTCSEEECG
T ss_pred             HHhhCCCCCCEEEEE-CCCchhHHHHHHHHHcCCceeeccCC--hHHHHHHHHHcCCcEEEcC
Confidence            456678898655554 57889999999999999877776654  4677888899999877643

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=89.38  E-value=1.5  Score=32.62  Aligned_cols=71  Identities=11%  Similarity=0.100  Sum_probs=49.5

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCC-hHHHHHHHHHHHHh
Q 028618           70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKG-MKGAVQKAEEILAK  141 (206)
Q Consensus        70 ~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~-~~~~~~~a~~~~~~  141 (206)
                      +..+|+.+++.-|.++|......|.++++.-.. ..+.....++.+|.+++.+..|-. .++..+...+..++
T Consensus         6 KvalVTGas~GIG~aia~~la~~Ga~V~~~~~~-~~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~   77 (247)
T d2ew8a1           6 KLAVITGGANGIGRAIAERFAVEGADIAIADLV-PAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVIST   77 (247)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-CCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-chHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Confidence            478899999999999999999999987776543 345556677889988877755422 33344444444444

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.28  E-value=2.3  Score=32.47  Aligned_cols=33  Identities=9%  Similarity=0.133  Sum_probs=26.3

Q ss_pred             CCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeC
Q 028618           69 GESVLIEPTSGNTGIGLAFMAAAKQYRLIITMP  101 (206)
Q Consensus        69 ~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp  101 (206)
                      |+..+||.+++.-|.++|......|.++++.-.
T Consensus        12 gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r   44 (297)
T d1yxma1          12 GQVAIVTGGATGIGKAIVKELLELGSNVVIASR   44 (297)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC
Confidence            357889999999999999888888887666543

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=89.28  E-value=0.53  Score=32.91  Aligned_cols=59  Identities=15%  Similarity=0.231  Sum_probs=39.4

Q ss_pred             HHcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEe
Q 028618           61 EAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLT  122 (206)
Q Consensus        61 ~~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~  122 (206)
                      .+.+.+++|++.+|.. .|--|...+..++..|-..++.+..  .+.|++..+.+||+-+.-
T Consensus        21 ~~~a~~k~g~~VlI~G-~Gg~g~~~~~~~~~~g~~~Vi~~~~--~~~rl~~a~~~GAd~~in   79 (175)
T d1cdoa2          21 VNTAKVEPGSTCAVFG-LGAVGLAAVMGCHSAGAKRIIAVDL--NPDKFEKAKVFGATDFVN   79 (175)
T ss_dssp             HTTTCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECS--CGGGHHHHHHTTCCEEEC
T ss_pred             HHhhCCCCCCEEEEEe-cCCccchHHHHHHHHhhchheeecc--hHHHHHHHHHcCCcEEEc
Confidence            3556788886655554 4556666666677777766555533  456788899999976654

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=89.14  E-value=0.35  Score=31.92  Aligned_cols=40  Identities=15%  Similarity=0.106  Sum_probs=32.8

Q ss_pred             CCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCH
Q 028618           67 TPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSL  106 (206)
Q Consensus        67 ~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~  106 (206)
                      .|+..+|-.-.+|..|+-+|.+|+++|++++++-|....+
T Consensus         8 ~~~~~kigIlGgGQL~rMla~aA~~lG~~v~v~d~~~~~P   47 (111)
T d1kjqa2           8 RPAATRVMLLGSGELGKEVAIECQRLGVEVIAVDRYADAP   47 (111)
T ss_dssp             STTCCEEEEESCSHHHHHHHHHHHTTTCEEEEEESSTTCG
T ss_pred             CCCCCEEEEEeCCHHHHHHHHHHHHCCCEEEEEcCCCCCc
Confidence            3444567777899999999999999999999998875433

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.12  E-value=2.2  Score=31.95  Aligned_cols=29  Identities=31%  Similarity=0.407  Sum_probs=13.5

Q ss_pred             EEeeCCCchHHHHHHH--HH-HCCCcEEEEeC
Q 028618           73 LIEPTSGNTGIGLAFM--AA-AKQYRLIITMP  101 (206)
Q Consensus        73 vv~aSsGN~g~alA~~--a~-~~g~~~~ivvp  101 (206)
                      |+.-|+|+.|.+.+.+  -. +.|.++++...
T Consensus         5 VAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r   36 (275)
T d1wmaa1           5 VALVTGGNKGIGLAIVRDLCRLFSGDVVLTAR   36 (275)
T ss_dssp             EEEESSCSSHHHHHHHHHHHHHSSSEEEEEES
T ss_pred             EEEECCCCCHHHHHHHHHHHHhCCCEEEEEEC
Confidence            4444555555554443  22 23555555443

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=89.11  E-value=1.4  Score=33.13  Aligned_cols=31  Identities=26%  Similarity=0.276  Sum_probs=23.8

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHCCCcEEEEe
Q 028618           70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITM  100 (206)
Q Consensus        70 ~~~vv~aSsGN~g~alA~~a~~~g~~~~ivv  100 (206)
                      +..+|+..++.-|+++|......|.++++.-
T Consensus         6 K~alVTGas~GIG~aia~~la~~Ga~V~l~~   36 (272)
T d1xkqa_           6 KTVIITGSSNGIGRTTAILFAQEGANVTITG   36 (272)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CEEEEeCcCcHHHHHHHHHHHHCCCEEEEEE
Confidence            4778888888888888888877777665554

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=89.11  E-value=0.94  Score=34.08  Aligned_cols=72  Identities=11%  Similarity=0.165  Sum_probs=49.6

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCC--CHHHHHHHHHcCCEEEEeCCCCC-hHHHHHHHHHHHHh
Q 028618           70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASM--SLERRIILRAFGAELVLTDPAKG-MKGAVQKAEEILAK  141 (206)
Q Consensus        70 ~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~--~~~~~~~~~~~Ga~v~~~~~~~~-~~~~~~~a~~~~~~  141 (206)
                      +..+|+..++--|.++|......|.++++.-....  .....+.++..|.+++.+..|-. .++..+...+..++
T Consensus         8 K~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~   82 (261)
T d1geea_           8 KVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKE   82 (261)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            47888888889999999999999999877765432  23446677889999887765532 33333334444444

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=89.04  E-value=1.6  Score=31.65  Aligned_cols=68  Identities=21%  Similarity=0.194  Sum_probs=50.1

Q ss_pred             hHHHHHHHHHHH-HcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEE
Q 028618           50 DRIGYSMISDAE-AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV  120 (206)
Q Consensus        50 ~R~a~~~~~~a~-~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~  120 (206)
                      .+|..+.+..+. ..|.-+...++++.-..||-|..+|......|.+++++   +....++.....+|++.+
T Consensus         6 a~Gv~~~~~~~~~~~g~~~L~gk~v~IqG~G~VG~~~A~~L~~~Gakvvv~---d~d~~~~~~~~~~g~~~~   74 (201)
T d1c1da1           6 AVGVFEAMKATVAHRGLGSLDGLTVLVQGLGAVGGSLASLAAEAGAQLLVA---DTDTERVAHAVALGHTAV   74 (201)
T ss_dssp             HHHHHHHHHHHHHHTTCCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEE---CSCHHHHHHHHHTTCEEC
T ss_pred             HHHHHHHHHHHHHHhCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEe---cchHHHHHHHHhhccccc
Confidence            467777777653 45532333467888999999999999999999998765   334566777778888764

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=89.00  E-value=1.4  Score=32.72  Aligned_cols=70  Identities=19%  Similarity=0.176  Sum_probs=50.1

Q ss_pred             CCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhC
Q 028618           69 GESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKT  142 (206)
Q Consensus        69 ~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~  142 (206)
                      |+..+|+.+++.-|.++|......|.++++.-...   .+.+..+..++..+.++-.. .++..+...+..++.
T Consensus         5 GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~---~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~   74 (248)
T d2d1ya1           5 GKGVLVTGGARGIGRAIAQAFAREGALVALCDLRP---EGKEVAEAIGGAFFQVDLED-ERERVRFVEEAAYAL   74 (248)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESST---THHHHHHHHTCEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH---HHHHHHHHcCCeEEEEeCCC-HHHHHHHHHHHHHhc
Confidence            45789999999999999999999999877665432   23556677899988887653 444444455555543

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=88.82  E-value=0.71  Score=32.61  Aligned_cols=61  Identities=16%  Similarity=0.199  Sum_probs=45.5

Q ss_pred             HHcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCC
Q 028618           61 EAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDP  124 (206)
Q Consensus        61 ~~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~  124 (206)
                      .+.+.+++|+ +++....|--|......|+.+|..-++.+..  ++.|++..+.+||+.++-..
T Consensus        22 ~~~~~~~~g~-tVlI~G~GgvGl~ai~~ak~~G~~~Vi~vd~--~~~kl~~Ak~~GA~~~in~~   82 (176)
T d1d1ta2          22 VKTGKVKPGS-TCVVFGLGGVGLSVIMGCKSAGASRIIGIDL--NKDKFEKAMAVGATECISPK   82 (176)
T ss_dssp             HTTSCCCTTC-EEEEECCSHHHHHHHHHHHHTTCSEEEEECS--CGGGHHHHHHHTCSEEECGG
T ss_pred             HHhhCCCCCC-EEEEECCCchhHHHHHHHHHcCCceEEEecC--cHHHHHHHHhcCCcEEECcc
Confidence            3556678885 4555677999999999999999765555543  45688899999998776443

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=88.68  E-value=0.45  Score=33.23  Aligned_cols=60  Identities=15%  Similarity=0.218  Sum_probs=44.4

Q ss_pred             HHcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeC
Q 028618           61 EAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTD  123 (206)
Q Consensus        61 ~~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~  123 (206)
                      .+++.++||++.+|.. .|--|......++.+|.+.++.+..  ++.|++..+.+||+-+...
T Consensus        21 ~~~~~~~~G~tVlI~G-aGGvG~~aiq~ak~~G~~~vi~~~~--~~~k~~~ak~lGa~~~i~~   80 (176)
T d2fzwa2          21 VNTAKLEPGSVCAVFG-LGGVGLAVIMGCKVAGASRIIGVDI--NKDKFARAKEFGATECINP   80 (176)
T ss_dssp             HTTTCCCTTCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECS--CGGGHHHHHHHTCSEEECG
T ss_pred             HHhhCCCCCCEEEEec-chhHHHHHHHHHHHHhcCceEEEcc--cHHHHHHHHHhCCcEEEeC
Confidence            3567789996655554 4567888888999999888777644  5567888899998766543

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=88.67  E-value=0.86  Score=34.33  Aligned_cols=73  Identities=16%  Similarity=0.245  Sum_probs=50.7

Q ss_pred             CCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCC--HHHHHHHHHcCCEEEEeCCCCC-hHHHHHHHHHHHHh
Q 028618           69 GESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS--LERRIILRAFGAELVLTDPAKG-MKGAVQKAEEILAK  141 (206)
Q Consensus        69 ~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~--~~~~~~~~~~Ga~v~~~~~~~~-~~~~~~~a~~~~~~  141 (206)
                      |+..+|+..++.-|.++|....+.|.++++.-.....  ....+.++..|.+++.+..|-. .++..+...+..++
T Consensus        18 gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~   93 (272)
T d1g0oa_          18 GKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKI   93 (272)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHH
Confidence            3578999999999999999999999998877654322  2345567888988887755432 34444444444444

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=88.44  E-value=1.3  Score=33.17  Aligned_cols=74  Identities=9%  Similarity=0.121  Sum_probs=50.1

Q ss_pred             CCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHH--HHHHHHHcCCEEEEeCCCCC-hHHHHHHHHHHHHhC
Q 028618           69 GESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLE--RRIILRAFGAELVLTDPAKG-MKGAVQKAEEILAKT  142 (206)
Q Consensus        69 ~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~--~~~~~~~~Ga~v~~~~~~~~-~~~~~~~a~~~~~~~  142 (206)
                      |+..+|+..++.-|.++|......|.++++.-.......  ..+..+.+|.++..+..|-. .++..+...+..++.
T Consensus         9 gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   85 (260)
T d1h5qa_           9 NKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADL   85 (260)
T ss_dssp             TEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            347888999999999999999999999888766544332  23344678888877765432 334444455555554

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=88.38  E-value=0.19  Score=31.17  Aligned_cols=51  Identities=8%  Similarity=-0.012  Sum_probs=38.6

Q ss_pred             eEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCC
Q 028618           71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAK  126 (206)
Q Consensus        71 ~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~~  126 (206)
                      ++|-.-.+|..|+=++.+|+.+|++++++-|+..++...     .-.+++..+-+.
T Consensus         2 k~vgIlG~GQLgrMl~~Aa~~LG~~v~vldp~~~~pa~~-----~a~dvIT~e~E~   52 (78)
T d3etja2           2 KQVCVLGNGQLGRMLRQAGEPLGIAVWPVGLDAEPAAVP-----FQQSVITAEIER   52 (78)
T ss_dssp             EEEEEEBCSHHHHHHHHHHGGGTEEEEEECTTSCGGGSC-----GGGSEEEESSSC
T ss_pred             CEEEEEcCCHHHHHHHHHHHHcCCEEEEEcCCCCCcccc-----cccceEEEeecc
Confidence            356777899999999999999999999999986544311     224777776543

>d1t57a_ c.49.1.2 (A:) Hypothetical protein MTH1675 {Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: Pyruvate kinase C-terminal domain-like
superfamily: PK C-terminal domain-like
family: MTH1675-like
domain: Hypothetical protein MTH1675
species: Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=88.36  E-value=0.65  Score=33.25  Aligned_cols=76  Identities=20%  Similarity=0.240  Sum_probs=53.3

Q ss_pred             CCCCChhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeC-------C--CCCHHHHHHHH
Q 028618           43 EPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMP-------A--SMSLERRIILR  113 (206)
Q Consensus        43 ~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp-------~--~~~~~~~~~~~  113 (206)
                      +|.-.+-+..+...+.+|.+.|.    +..+|.+|+|.++..++-+.   .-++++|--       .  ..+++.++.++
T Consensus        10 ~~G~~NT~~~l~~a~~ra~elgi----~~iVvAStsG~TA~~~~e~~---~~~lvvVth~~GF~~pg~~e~~~e~~~~L~   82 (186)
T d1t57a_          10 EPGKENTERVLELVGERADQLGI----RNFVVASVSGETALRLSEMV---EGNIVSVTHHAGFREKGQLELEDEARDALL   82 (186)
T ss_dssp             SCSGGGHHHHHHHHHHHHHHHTC----CEEEEECSSSHHHHHHHTTC---CSEEEEECCCTTSSSTTCCSSCHHHHHHHH
T ss_pred             CCCcccHHHHHHHHHHHHHHcCC----CeEEEEeCCcHHHHHHHHhc---CCCEEEEecccCCCCCCCCccCHHHHHHHH
Confidence            35556778888889999999886    25666667799987664443   335544431       1  24688899999


Q ss_pred             HcCCEEEEeCCC
Q 028618          114 AFGAELVLTDPA  125 (206)
Q Consensus       114 ~~Ga~v~~~~~~  125 (206)
                      ..|.+|+.-...
T Consensus        83 ~~G~~V~t~tH~   94 (186)
T d1t57a_          83 ERGVNVYAGSHA   94 (186)
T ss_dssp             HHTCEEECCSCT
T ss_pred             HcCCEEEEeccc
Confidence            999999876544

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=88.26  E-value=2.5  Score=31.69  Aligned_cols=32  Identities=31%  Similarity=0.358  Sum_probs=25.5

Q ss_pred             CCeEEEeeCCCchHHHHHHHHHHCCCcEEEEe
Q 028618           69 GESVLIEPTSGNTGIGLAFMAAAKQYRLIITM  100 (206)
Q Consensus        69 ~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivv  100 (206)
                      |+..+|+..++--|+++|......|.++++.-
T Consensus         4 gK~alITGas~GIG~aia~~la~~Ga~V~~~~   35 (274)
T d1xhla_           4 GKSVIITGSSNGIGRSAAVIFAKEGAQVTITG   35 (274)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEE
Confidence            34788888888899999988888888766654

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=87.77  E-value=0.56  Score=31.22  Aligned_cols=50  Identities=8%  Similarity=0.088  Sum_probs=40.6

Q ss_pred             EEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCC
Q 028618           73 LIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPA  125 (206)
Q Consensus        73 vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~  125 (206)
                      ++....|+.|+.+|-.....|++++++   +..+.+.+.++..|.+++.-+..
T Consensus         3 ~iIiG~G~~G~~la~~L~~~g~~vvvi---d~d~~~~~~~~~~~~~~~~gd~~   52 (134)
T d2hmva1           3 FAVIGLGRFGGSIVKELHRMGHEVLAV---DINEEKVNAYASYATHAVIANAT   52 (134)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTCCCEEE---ESCHHHHHHTTTTCSEEEECCTT
T ss_pred             EEEECCCHHHHHHHHHHHHCCCeEEEe---cCcHHHHHHHHHhCCcceeeecc
Confidence            555688999999999999999999888   44567788888888888765544

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=87.52  E-value=1.1  Score=33.46  Aligned_cols=73  Identities=12%  Similarity=0.086  Sum_probs=49.3

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCC-CHHHHHHHHHcCCEEEEeCCCC-ChHHHHHHHHHHHHhC
Q 028618           70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASM-SLERRIILRAFGAELVLTDPAK-GMKGAVQKAEEILAKT  142 (206)
Q Consensus        70 ~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~-~~~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~~~  142 (206)
                      +..+||..++.-|+++|....+.|.++++.-.... -....+.++..|.++..+..|- +.++..+...+..++.
T Consensus         3 KValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~   77 (257)
T d2rhca1           3 EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERY   77 (257)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHh
Confidence            46789999999999999999999999777654321 1233456678888887765542 2344444455555554

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=87.34  E-value=0.84  Score=34.22  Aligned_cols=73  Identities=11%  Similarity=0.081  Sum_probs=48.4

Q ss_pred             CCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCC-CHHHHHHHHHcCCEEEEeCCCCC-hHHHHHHHHHHHHh
Q 028618           69 GESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASM-SLERRIILRAFGAELVLTDPAKG-MKGAVQKAEEILAK  141 (206)
Q Consensus        69 ~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~-~~~~~~~~~~~Ga~v~~~~~~~~-~~~~~~~a~~~~~~  141 (206)
                      |+..+|+.+++--|.++|......|.++++.-.... -....+.++..|.+++.+..|-. .++..+...+..++
T Consensus        11 gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~   85 (255)
T d1fmca_          11 GKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISK   85 (255)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            347889999999999999999999999877654321 12334567788988877765532 33444444444444

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=87.09  E-value=3.2  Score=30.82  Aligned_cols=31  Identities=23%  Similarity=0.243  Sum_probs=23.7

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHCCCcEEEEe
Q 028618           70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITM  100 (206)
Q Consensus        70 ~~~vv~aSsGN~g~alA~~a~~~g~~~~ivv  100 (206)
                      +..+|+..++--|.++|....+.|.++++.-
T Consensus         6 KvalVTGas~GIG~aia~~la~~Ga~V~~~~   36 (264)
T d1spxa_           6 KVAIITGSSNGIGRATAVLFAREGAKVTITG   36 (264)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CEEEEeCcCCHHHHHHHHHHHHCCCEEEEEE
Confidence            4678888888888888888877777665554

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=86.63  E-value=0.91  Score=31.70  Aligned_cols=60  Identities=15%  Similarity=0.165  Sum_probs=43.5

Q ss_pred             HHcCCCCCCCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeC
Q 028618           61 EAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTD  123 (206)
Q Consensus        61 ~~~g~~~~~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~  123 (206)
                      .+.+.+++|+..+|. ..|--|...+..++.+|...++++..  ++.|.+..+.+|++-....
T Consensus        21 ~~~~~vk~GdtVlV~-GaGG~G~~~~~~~~~~g~~~Vi~~~~--~~~k~~~a~~~Ga~~~i~~   80 (176)
T d2jhfa2          21 VKVAKVTQGSTCAVF-GLGGVGLSVIMGCKAAGAARIIGVDI--NKDKFAKAKEVGATECVNP   80 (176)
T ss_dssp             HTTTCCCTTCEEEEE-CCSHHHHHHHHHHHHTTCSEEEEECS--CGGGHHHHHHTTCSEEECG
T ss_pred             HHhhCCCCCCEEEEE-CCCCcHHHHHHHHHHcCCceEEeecC--cHHHHHHHHHhCCeeEEec
Confidence            466778998655554 45668888899999999877666544  4566788889998766544

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.95  E-value=1.3  Score=32.98  Aligned_cols=74  Identities=19%  Similarity=0.127  Sum_probs=48.6

Q ss_pred             CCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCC-HHHHHHHHHcCCEEEEeCCCCC-hHHHHHHHHHHHHhC
Q 028618           69 GESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVLTDPAKG-MKGAVQKAEEILAKT  142 (206)
Q Consensus        69 ~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~-~~~~~~~~~~Ga~v~~~~~~~~-~~~~~~~a~~~~~~~  142 (206)
                      |+..+||..++--|.++|......|.++++.-..... ..-.+.++..|.+++.+..|-. .++..+..++..++.
T Consensus         7 Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~   82 (244)
T d1yb1a_           7 GEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEI   82 (244)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHc
Confidence            4578888999999999999999999998886554221 1234456788888776654432 333344444444444

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=85.91  E-value=2  Score=31.65  Aligned_cols=55  Identities=15%  Similarity=0.108  Sum_probs=42.4

Q ss_pred             CCeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCC
Q 028618           69 GESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPA  125 (206)
Q Consensus        69 ~~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~~~  125 (206)
                      |+..+|+..++.-|.++|......|.++++.-...  ....+..+.+|.+++.+..|
T Consensus         5 gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~D   59 (241)
T d2a4ka1           5 GKTILVTGAASGIGRAALDLFAREGASLVAVDREE--RLLAEAVAALEAEAIAVVAD   59 (241)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH--HHHHHHHHTCCSSEEEEECC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH--HHHHHHHHHcCCceEEEEec
Confidence            35789999999999999999999999988775432  33345567889888777554

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=85.56  E-value=2.1  Score=31.80  Aligned_cols=73  Identities=15%  Similarity=-0.007  Sum_probs=45.2

Q ss_pred             CCeEEEeeCCCc--hHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEE--EeCCCCChHHHHHHHHHHHHhC
Q 028618           69 GESVLIEPTSGN--TGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV--LTDPAKGMKGAVQKAEEILAKT  142 (206)
Q Consensus        69 ~~~~vv~aSsGN--~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~--~~~~~~~~~~~~~~a~~~~~~~  142 (206)
                      |+..+|+..+|+  -|.|+|......|.++++.-.......+.+.+...|....  ..+... ..+..+...+..+..
T Consensus         5 gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~-~~~~~~~~~~~~~~~   81 (274)
T d2pd4a1           5 GKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSK-EEHFKSLYNSVKKDL   81 (274)
T ss_dssp             TCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTC-HHHHHHHHHHHHHHT
T ss_pred             CCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhCCceeEeeecccc-hhhHHHHHHHHHHHc
Confidence            457788876665  7888888889999999988766555556666655554433  333332 333344444444444

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=85.09  E-value=1.3  Score=31.72  Aligned_cols=49  Identities=12%  Similarity=0.166  Sum_probs=41.3

Q ss_pred             EEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeC
Q 028618           72 VLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTD  123 (206)
Q Consensus        72 ~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~~  123 (206)
                      .++.-..|+.|...+..|..+|-.++++   +....++++++.+|++.+.+.
T Consensus        31 ~VvViGaGvaG~~Aa~~A~~lGA~V~v~---D~~~~~~~~l~~l~~~~i~~~   79 (183)
T d1l7da1          31 RVLVFGVGVAGLQAIATAKRLGAVVMAT---DVRAATKEQVESLGGKFITVD   79 (183)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCEEEEE---CSCSTTHHHHHHTTCEECCC-
T ss_pred             EEEEEcCcHHHHHHHHHHHHcCCEEEEE---eccHHHHHHHHHhhcceEEEe
Confidence            5777899999999999999999999888   555567888899999888654

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=84.88  E-value=1.6  Score=30.11  Aligned_cols=49  Identities=18%  Similarity=0.054  Sum_probs=39.3

Q ss_pred             eEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCCEEEEe
Q 028618           71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLT  122 (206)
Q Consensus        71 ~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga~v~~~  122 (206)
                      +++....+|+.|.++|...++.|.+++++-+   .+.+.+.++..|......
T Consensus         2 k~iaIiGaG~~G~~~A~~l~~~G~~V~~~~r---~~~~~~~~~~~~~~~~~~   50 (184)
T d1bg6a2           2 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDI---DAQRIKEIQDRGAIIAEG   50 (184)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTCEEEEECS---CHHHHHHHHHHTSEEEES
T ss_pred             CEEEEECccHHHHHHHHHHHHCCCEEEEEEC---CHHHHHHHHHcCCCchhh
Confidence            3577788999999999999999999998855   456777787777655543

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=84.54  E-value=4.6  Score=29.79  Aligned_cols=103  Identities=14%  Similarity=0.034  Sum_probs=55.2

Q ss_pred             eEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCH--HHHHHH-HHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEE
Q 028618           71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSL--ERRIIL-RAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYM  147 (206)
Q Consensus        71 ~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~--~~~~~~-~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~  147 (206)
                      ..|||..++--|.++|......|.++++........  ...+.+ ...+...+.+..+....          ...+....
T Consensus         4 VAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~----------~~~~~~~~   73 (284)
T d1e7wa_           4 VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNV----------ATAPVSGA   73 (284)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSS----------CBCCCC--
T ss_pred             EEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccc----------cccccccc
Confidence            357788888888999888888898877765433211  111222 34455555544331100          00001111


Q ss_pred             cCCCCCCccHHHHHHhHHHHHHhhhCCCCCEEEEccCcc
Q 028618          148 LQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTG  186 (206)
Q Consensus       148 ~~~~~~~~~~~~g~~t~~~Ei~~q~~~~~d~vv~~vG~G  186 (206)
                      ... .+... ......+..++.+++ +++|.+|-.+|..
T Consensus        74 ~~~-~dv~~-~~~v~~~~~~~~~~~-G~iDiLVnnAG~~  109 (284)
T d1e7wa_          74 DGS-APVTL-FTRCAELVAACYTHW-GRCDVLVNNASSF  109 (284)
T ss_dssp             --C-CCBCH-HHHHHHHHHHHHHHH-SCCCEEEECCCCC
T ss_pred             ccc-ccCCC-HHHHHHHHHHHHHHh-CCCCEEEecCCcc
Confidence            011 11122 344566677777777 5799999888864

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=84.40  E-value=4.5  Score=28.48  Aligned_cols=32  Identities=22%  Similarity=0.244  Sum_probs=28.7

Q ss_pred             eEEEeeCCCchHHHHHHHHHHCCCcEEEEeCC
Q 028618           71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPA  102 (206)
Q Consensus        71 ~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~  102 (206)
                      +.|+.-.+|-.|++.|+.+++.|+++++|=..
T Consensus        44 k~V~IIGaGPAGL~AA~~la~~G~~Vtl~E~~   75 (179)
T d1ps9a3          44 KNLAVVGAGPAGLAFAINAAARGHQVTLFDAH   75 (179)
T ss_dssp             CEEEEECCSHHHHHHHHHHHTTTCEEEEEESS
T ss_pred             cEEEEECccHHHHHHHHHHHhhccceEEEecc
Confidence            56888999999999999999999999999544

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=83.11  E-value=6.6  Score=28.48  Aligned_cols=31  Identities=13%  Similarity=0.293  Sum_probs=23.2

Q ss_pred             eEEEeeCCCchHHHHHHHHHHCCCcEEEEeC
Q 028618           71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMP  101 (206)
Q Consensus        71 ~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp  101 (206)
                      ..|||.+++--|.++|......|.++++.-.
T Consensus         3 vAlVTGas~GIG~aia~~la~~G~~Vvi~~r   33 (266)
T d1mxha_           3 AAVITGGARRIGHSIAVRLHQQGFRVVVHYR   33 (266)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC
Confidence            4578888888888888887777776666553

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=82.74  E-value=4.1  Score=29.85  Aligned_cols=68  Identities=24%  Similarity=0.142  Sum_probs=47.2

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCCCHHHH-HHHHHcCCEEEEeCCCCChHHHHHHHHHHHHh
Q 028618           70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERR-IILRAFGAELVLTDPAKGMKGAVQKAEEILAK  141 (206)
Q Consensus        70 ~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~~~~~~-~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~  141 (206)
                      +..+|+..++--|.++|......|.++++.-..   +.++ +..+.++++.+.++-.. .++..+...+..++
T Consensus         6 K~~lITGas~GIG~aia~~l~~~G~~V~~~~r~---~~~l~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~   74 (242)
T d1ulsa_           6 KAVLITGAAHGIGRATLELFAKEGARLVACDIE---EGPLREAAEAVGAHPVVMDVAD-PASVERGFAEALAH   74 (242)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHTTTCEEEECCTTC-HHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHHcCCeEEEEecCC-HHHHHHHHHHHHHh
Confidence            478899999999999999999999987776433   2333 34467888888887653 44444444454444

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=82.70  E-value=2.4  Score=31.25  Aligned_cols=72  Identities=11%  Similarity=0.141  Sum_probs=48.8

Q ss_pred             eEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCC--CHHHHHHHHHcCCEEEEeCCCCC-hHHHHHHHHHHHHhC
Q 028618           71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASM--SLERRIILRAFGAELVLTDPAKG-MKGAVQKAEEILAKT  142 (206)
Q Consensus        71 ~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~--~~~~~~~~~~~Ga~v~~~~~~~~-~~~~~~~a~~~~~~~  142 (206)
                      ..+|+..++.-|+++|......|.++++....+.  .+...+.++.+|.+++.+..|-. .++..+...+..++.
T Consensus         3 V~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   77 (244)
T d1edoa_           3 VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAW   77 (244)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHS
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            4678888888999999999999999887654332  23345667889999887765532 233444445555554

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=82.11  E-value=1.5  Score=32.56  Aligned_cols=73  Identities=15%  Similarity=0.079  Sum_probs=47.5

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCCC-CHHHHHHHHHcCCEEEEeCCCCC-hHHHHHHHHHHHHhC
Q 028618           70 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASM-SLERRIILRAFGAELVLTDPAKG-MKGAVQKAEEILAKT  142 (206)
Q Consensus        70 ~~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~~-~~~~~~~~~~~Ga~v~~~~~~~~-~~~~~~~a~~~~~~~  142 (206)
                      +..+|+..++--|+++|......|.++++.-.... -....+.++..|.++..+..|-. .++..+...+..++.
T Consensus        11 KvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~   85 (251)
T d2c07a1          11 KVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEH   85 (251)
T ss_dssp             CEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Confidence            46788888888999999999999998777654321 12234566788888777765532 333444444554554

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=82.03  E-value=0.6  Score=32.73  Aligned_cols=32  Identities=19%  Similarity=0.142  Sum_probs=27.1

Q ss_pred             eEEEeeCCCchHHHHHHHHHHCCCc-EEEEeCC
Q 028618           71 SVLIEPTSGNTGIGLAFMAAAKQYR-LIITMPA  102 (206)
Q Consensus        71 ~~vv~aSsGN~g~alA~~a~~~g~~-~~ivvp~  102 (206)
                      +.|+.-.+|+.|+..|..++++|++ +++|=..
T Consensus         5 ~kVaIIGaGpaGl~aA~~l~~~G~~~V~v~E~~   37 (196)
T d1gtea4           5 AKIALLGAGPASISCASFLARLGYSDITIFEKQ   37 (196)
T ss_dssp             CCEEEECCSHHHHHHHHHHHHTTCCCEEEEESS
T ss_pred             CEEEEECChHHHHHHHHHHHHCCCCeEEEEEec
Confidence            3578899999999999999999995 8787533

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.94  E-value=2.2  Score=27.97  Aligned_cols=33  Identities=9%  Similarity=0.055  Sum_probs=29.6

Q ss_pred             eEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCC
Q 028618           71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPAS  103 (206)
Q Consensus        71 ~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~  103 (206)
                      +.++.-.+|..|.-+|.+.+.+|.+++++.+..
T Consensus        23 k~vvIvGgG~iG~E~A~~l~~~G~~Vtlv~~~~   55 (125)
T d3grsa2          23 GRSVIVGAGYIAVEMAGILSALGSKTSLMIRHD   55 (125)
T ss_dssp             SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CEEEEEcCCccHHHHHHHHhcCCcEEEEEeecc
Confidence            468889999999999999999999999998764

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=81.80  E-value=2.9  Score=26.86  Aligned_cols=33  Identities=24%  Similarity=0.169  Sum_probs=29.5

Q ss_pred             eEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCC
Q 028618           71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPAS  103 (206)
Q Consensus        71 ~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~  103 (206)
                      +.++.-.+|..|.-+|.+.+.+|.+++++-...
T Consensus        23 ~~v~IiGgG~ig~E~A~~l~~~G~~Vtlve~~~   55 (117)
T d1ebda2          23 KSLVVIGGGYIGIELGTAYANFGTKVTILEGAG   55 (117)
T ss_dssp             SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CeEEEECCCccceeeeeeecccccEEEEEEecc
Confidence            468889999999999999999999999997654

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=81.68  E-value=3  Score=30.74  Aligned_cols=53  Identities=15%  Similarity=0.233  Sum_probs=38.8

Q ss_pred             eEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCC--CCHH---HHHHHHHcCCEEEEeC
Q 028618           71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPAS--MSLE---RRIILRAFGAELVLTD  123 (206)
Q Consensus        71 ~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~--~~~~---~~~~~~~~Ga~v~~~~  123 (206)
                      +.+|+.++|..|..++......|.+++++....  ....   ....+...+++++..+
T Consensus         5 KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d   62 (312)
T d1qyda_           5 RVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEAS   62 (312)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEee
Confidence            689999999999999999999999999988543  2222   2334455666666544

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=81.55  E-value=3.5  Score=30.31  Aligned_cols=73  Identities=11%  Similarity=0.012  Sum_probs=40.8

Q ss_pred             CCeEEEeeCCC--chHHHHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHcCC--EEEEeCCCCChHHHHHHHHHHHHhC
Q 028618           69 GESVLIEPTSG--NTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGA--ELVLTDPAKGMKGAVQKAEEILAKT  142 (206)
Q Consensus        69 ~~~~vv~aSsG--N~g~alA~~a~~~g~~~~ivvp~~~~~~~~~~~~~~Ga--~v~~~~~~~~~~~~~~~a~~~~~~~  142 (206)
                      |+..+|+..+|  --|+++|......|.++++.-.........+.....+.  ..+.++-.. .++..+...+..++.
T Consensus         8 gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~   84 (256)
T d1ulua_           8 GKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQ-DEELDALFAGVKEAF   84 (256)
T ss_dssp             TCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhhhccCcccccccccCC-HHHHHHHHHHHHHhc
Confidence            34678887666  47889999999999997665544333333333333333  333334332 334444444444444

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=81.33  E-value=2.1  Score=27.69  Aligned_cols=33  Identities=9%  Similarity=-0.022  Sum_probs=29.3

Q ss_pred             eEEEeeCCCchHHHHHHHHHHCCCcEEEEeCCC
Q 028618           71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPAS  103 (206)
Q Consensus        71 ~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~~  103 (206)
                      +.++.-.+|..|.-+|...+++|.+++++-...
T Consensus        22 ~~vvIiGgG~ig~E~A~~l~~~G~~Vtlve~~~   54 (116)
T d1gesa2          22 ERVAVVGAGYIGVELGGVINGLGAKTHLFEMFD   54 (116)
T ss_dssp             SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CEEEEECCChhhHHHHHHhhccccEEEEEeecc
Confidence            468889999999999999999999999997654

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=80.17  E-value=2.3  Score=27.90  Aligned_cols=32  Identities=6%  Similarity=-0.007  Sum_probs=28.7

Q ss_pred             eEEEeeCCCchHHHHHHHHHHCCCcEEEEeCC
Q 028618           71 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPA  102 (206)
Q Consensus        71 ~~vv~aSsGN~g~alA~~a~~~g~~~~ivvp~  102 (206)
                      +.++.-.+|.-|.-+|.+.+++|.+++++...
T Consensus        21 ~~vvIIGgG~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          21 GKTLVVGASYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CeEEEECCCccHHHHHHHHhhcCCeEEEEEec
Confidence            35788899999999999999999999999864