Citrus Sinensis ID: 028657

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200------
Protein Sequence
MCSQVVSESEQEELIDRLEIFKIHGRDKQGRKILRIIGKFFPARLLSVEVLKRYLSERVYPRLGKKAFTVLYVHTGVQRSENFAGISALRSIYDAIPANVKENLQAVYFVHPGLQARLFLATFGRLFFNGVGGLYGKLRYVNRLDYLWEHVRRHEVEIPEFVMDHDEDLEYRPMMDYGLESDHRRVYGAPAVDSPALSIYSMRCIS
Secondary Structure (PSIPRED)
cccccccccccHHHHHHcccEEEEcccccccEEEEEEEEEcccccccHHHHHHHHHHHHccccccccEEEEEEEcccccccccccHHHHHHHHHHccHHHHHcccEEEEEcccHHHHHHHHHHcccccccccccccEEEEEccHHHHHcccccccccccHHHHHHHHHHccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccHHHcccccHHHHHHccEEEEEcccccccEEEEEEEcccccccccHHHHHHHHHHHHHHHHccccEEEEEEEcccccccccccHHHHHHHHHHHcHHHHHHHHEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHcccccHHHHHHHHHHccccccccccccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
MCSQVVSESEQEELIDRLEIFKIHGRDKQGRKILRIIGKFFPARLLSVEVLKRYLServyprlgkkAFTVLYVHtgvqrsenfAGISALRSIYDAIPANVKENLQAVYFVHPGLQARLFLATFGRlffngvgglygklryVNRLDYLWEHVRRHeveipefvmdhdedleyrpmmdyglesdhrrvygapavdspalsiysmrcis
Flexible Loop (DISEMBL)
mcsqvvseseqeELIDRLEIfkihgrdkqgrKILRIIGkffparllsVEVLKRYLservyprlgkKAFTVLYVHTGVQRSENFAGISALRSIYDAIPANVKENLQAVYFVHPGLQARLFLATFGRLFFNGVGGLYGKLRYVNRLDYLWEHVRRHeveipefvmdhdedLEYRPMMDYGLESDHRRVYGapavdspalsiysmrcis
Low Complexity Region (SEG)
MCsqvvseseqeeLIDRLEIFKIHGRDKQGRKILRIIGKFFPARLLSVEVLKRYLSERVYPRLGKKAFTVLYVHTGVQRSENFAGISALRSIYDAIPANVKENLQAVYFVHPGLQARLFLATFGRLFFNGVGGLYGKLRYVNRLDYLWEHVRRHEVEIPEFVMDHDEDLEYRPMMDYGLESDHRRVYGAPAVDSPALSIYSMRCIS
Disordered region (IsUnstruct)
*************LIDRLEIFKIHGRDKQGRKILRIIGKFFPARLLSVEVLKRYLSERVYPRLGKKAFTVLYVHTGVQRSENFAGISALRSIYDAIPANVKENLQAVYFVHPGLQARLFLATFGRLFFNGVGGLYGKLRYVNRLDYLWEHVRRHEVEIPEFVMDHDEDLEYRPMMDYGLESDHRRVYGAPAVD*PALSIY******
Disordered Region (DISOPRED)
*********EQEELIDRLEIFKIHGRDKQGRKILRIIGKFFPARLLSVEVLKRYLSERVYPRLGKKAFTVLYVHTGVQRSENFAGISALRSIYDAIPANVKENLQAVYFVHPGLQARLFLATFGRLFFNGVGGLYGKLRYVNRLDYLWEHVRRHEVEIPEFVMDHDEDLEYRPMM***********YGAPAVDSPALSIYSMRCIS
Disordered Region (DISEMBL)
************ELIDRLEIFKIHGRDKQGRKILRIIGKFFPARLLSVEVLKRYLSERVYPRLGKKAFTVLYVHTGVQRSENFAGISALRSIYDAIPANVKENLQAVYFVHPGLQARLFLATFGRLFFNGVGGLYGKLRYVNRLDYLWEHVRRHEVEIPEFVMDHDEDLEYRPMMDYGLESDHRRVYGAPAVDSPALSIYSMRCIS
Disordered Region (DISPRO)
*CSQVVSESEQEELIDRLEIFKIHGRDKQGRKILRIIGKFFPARLLSVEVLKRYLSERVYPRLGKKAFTVLYVHTGVQRSENFAGISALRSIYDAIPANVKENLQAVYFVHPGLQARLFLATFGRLFFNGVGGLYGKLRYVNRLDYLWEHVRRHEVEIPEFVMDHDEDLEYRPMMDYGLESDHRRVYGAPAVDSPALSIYSMRC**
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MCSQVVSESEQEELIDRLEIFKIHGRDKQGRKILRIIGKFFPARLLSVEVLKRYLSERVYPRLGKKAFTVLYVHTGVQRSENFAGISALRSIYDAIPANVKENLQAVYFVHPGLQARLFLATFGRLFFNGVGGLYGKLRYVNRLDYLWEHVRRHEVEIPEFVMDHDEDLEYRPMMDYGLESDHRRVYGAPAVDSPALSIYSMRCIS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	206	2.2.26 [Sep-21-2011]
Q5CZL1	496	Ganglioside-induced diffe	yes	no	0.742	0.308	0.295	4e-12
Q5XGM5	496	Ganglioside-induced diffe	N/A	no	0.742	0.308	0.295	8e-12
Q9DBL2	498	Ganglioside-induced diffe	yes	no	0.737	0.305	0.276	8e-12
Q7JUR6	540	Protein GDAP2 homolog OS=	no	no	0.665	0.253	0.260	1e-11
Q66HX8	504	Ganglioside-induced diffe	yes	no	0.650	0.265	0.296	1e-11
Q292F9	542	Protein GDAP2 homolog OS=	yes	no	0.665	0.252	0.260	1e-11
Q66H63	497	Ganglioside-induced diffe	yes	no	0.728	0.301	0.279	1e-11
Q9NXN4	497	Ganglioside-induced diffe	yes	no	0.728	0.301	0.279	1e-11
Q4R678	461	Ganglioside-induced diffe	N/A	no	0.728	0.325	0.279	1e-11
Q2KIX2	497	Ganglioside-induced diffe	yes	no	0.728	0.301	0.279	1e-11

>sp|Q5CZL1|GDAP2_XENTR Ganglioside-induced differentiation-associated protein 2 OS=Xenopus tropicalis PE=2 SV=1

 Score = 71.6 bits (174), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 49/166 (29%), Positives = 83/166 (50%), Gaps = 13/166 (7%)

Query: 6   VSESEQEELID--RLEIFKIHGRDKQGRKILRIIGKFFPARLLSVEVLKRYLSERVYPRL 63
           +S +  E+L D   L+     G D  GR ++ ++G+  P  L+ +E    Y    +   +
Sbjct: 322 LSRARTEDLSDIAALKALYQSGVDNCGRTVMVVVGRNIPVLLIDMEKALLYFI-HMMDHV 380

Query: 64  GKKAFTVLYVHTGVQRSENFAGISALRSIYDAIPANVKENLQAVYFVHPGLQARL---FL 120
             K + ++Y HT +    N      L+++YD +    K+NL+A+YFVHP  ++++   F 
Sbjct: 381 AAKEYVLVYFHT-LTGEHNHPDSDFLKNMYDIVDVKYKKNLKALYFVHPTFRSKVSSWFF 439

Query: 121 ATFGRLFFNGVGGLYGKLRYVNRLDYLWEHVRRHEVEIPEFVMDHD 166
            TF       V GL  K+  V  L  L+  V   ++EIP FV+D+D
Sbjct: 440 TTF------TVSGLKDKVHQVESLHQLFSAVPPEQIEIPPFVLDYD 479

Xenopus tropicalis (taxid: 8364)

>sp|Q5XGM5|GDAP2_XENLA Ganglioside-induced differentiation-associated protein 2 OS=Xenopus laevis PE=2 SV=1

 Score = 70.5 bits (171), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 49/166 (29%), Positives = 83/166 (50%), Gaps = 13/166 (7%)

Query: 6   VSESEQEELID--RLEIFKIHGRDKQGRKILRIIGKFFPARLLSVEVLKRYLSERVYPRL 63
           +S +  E+L D   L+     G D  GR ++ ++G+  P  L+ +E    Y    +   +
Sbjct: 322 LSRARTEDLSDIAALKALYQSGVDNCGRSVMVVVGRNIPVLLIDMEKALLYFI-HMMDHV 380

Query: 64  GKKAFTVLYVHTGVQRSENFAGISALRSIYDAIPANVKENLQAVYFVHPGLQARL---FL 120
             K + ++Y HT +    N      L+++YD I    K+NL+A+YFVHP  ++++   F 
Sbjct: 381 TAKDYVLVYFHT-LTGEHNHLDSDFLKNMYDIIDVKYKKNLKALYFVHPTFRSKVSTWFF 439

Query: 121 ATFGRLFFNGVGGLYGKLRYVNRLDYLWEHVRRHEVEIPEFVMDHD 166
            TF       V GL  K+  V  L  L+  +   ++EIP FV+D+D
Sbjct: 440 TTF------TVSGLKDKVHQVESLHQLFTAIPPEQIEIPPFVLDYD 479

Xenopus laevis (taxid: 8355)

>sp|Q9DBL2|GDAP2_MOUSE Ganglioside-induced differentiation-associated protein 2 OS=Mus musculus GN=Gdap2 PE=2 SV=1

 Score = 70.5 bits (171), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 79/163 (48%), Gaps = 11/163 (6%)

Query: 7   SESEQEELIDRLEIFKIHGRDKQGRKILRIIGKFFPARLLSVEVLKRYLSERVYPRLGKK 66
           + SE    I  L+     G D  GR ++ ++G+  P  L+ ++    Y    V   +  K
Sbjct: 327 ARSEDLSDIASLKALYQTGVDNCGRTVMVVVGRNIPVTLIDMDKALLYFI-HVMDHIAVK 385

Query: 67  AFTVLYVHTGVQRSENFAGISALRSIYDAIPANVKENLQAVYFVHPGLQARL---FLATF 123
            + ++Y HT +    N      L+ +YD +    K NL+AVYFVHP  ++++   F  TF
Sbjct: 386 EYVLVYFHT-LTSDYNHLDSDFLKKLYDVVDIKYKRNLKAVYFVHPTFRSKVSTWFFTTF 444

Query: 124 GRLFFNGVGGLYGKLRYVNRLDYLWEHVRRHEVEIPEFVMDHD 166
                  V GL  K+ +V+ L  L+  +   +++ P FV+++D
Sbjct: 445 ------SVSGLKDKIHHVDSLQQLFSAISPEQIDFPPFVLEYD 481

Mus musculus (taxid: 10090)

>sp|Q7JUR6|GDAP2_DROME Protein GDAP2 homolog OS=Drosophila melanogaster GN=CG18812 PE=2 SV=1

 Score = 70.1 bits (170), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 37/142 (26%), Positives = 74/142 (52%), Gaps = 5/142 (3%)

Query: 25  GRDKQGRKILRIIGKFFPARLLSVEVLKRYLSERVYPRLGKKAFTVLYVHTGVQRSENFA 84
           G D+ GR ++   GK+FPA+ + +E    YL + + P + K  + + Y HT +  + N+ 
Sbjct: 388 GVDRLGRPVIVFCGKWFPAQNIDLEKALLYLIKLLDP-IVKGDYVISYFHT-LTSTNNYP 445

Query: 85  GISALRSIYDAIPANVKENLQAVYFVHPGLQARLFLATFGRLFFNGVGGLYGKLRYVNRL 144
            +  LR +Y  +P   K+NL+A Y VHP    ++    F          +  K+  +  +
Sbjct: 446 SLHWLREVYSVLPYKYKKNLKAFYIVHPTFWTKMMTWWFTTFM---APAIKAKVHSLPGV 502

Query: 145 DYLWEHVRRHEVEIPEFVMDHD 166
           ++L+  + + ++EIP ++ ++D
Sbjct: 503 EHLYSAITKDQLEIPAYITEYD 524

Drosophila melanogaster (taxid: 7227)

>sp|Q66HX8|GDAP2_DANRE Ganglioside-induced differentiation-associated protein 2 OS=Danio rerio GN=gdap2 PE=2 SV=1

 Score = 70.1 bits (170), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 74/145 (51%), Gaps = 11/145 (7%)

Query: 25  GRDKQGRKILRIIGKFFPARLLSVEVLKRYLSERVYPRLGKKAFTVLYVHTGVQRSENFA 84
           G D  GR ++ ++G+  P  L+ +E    Y    V   +  K + ++Y HT +    N  
Sbjct: 353 GVDLCGRTVMVVVGRNIPVMLIDMEKALLYFI-HVMDHITVKEYVMVYFHT-LTGEHNHL 410

Query: 85  GISALRSIYDAIPANVKENLQAVYFVHPGLQARL---FLATFGRLFFNGVGGLYGKLRYV 141
               L+ +YD + A  K+NL+A YFVHP  ++++   F  TF       V GL  K+ ++
Sbjct: 411 DTDFLKKLYDIVDAKFKKNLRAFYFVHPTFRSKVSTWFFTTF------SVSGLKDKVHHI 464

Query: 142 NRLDYLWEHVRRHEVEIPEFVMDHD 166
             L  L+  V   +++IP FV+++D
Sbjct: 465 ENLQQLFTCVLPEQIDIPPFVLEYD 489

Danio rerio (taxid: 7955)

>sp|Q292F9|GDAP2_DROPS Protein GDAP2 homolog OS=Drosophila pseudoobscura pseudoobscura GN=GA15091 PE=3 SV=1

 Score = 70.1 bits (170), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 37/142 (26%), Positives = 74/142 (52%), Gaps = 5/142 (3%)

Query: 25  GRDKQGRKILRIIGKFFPARLLSVEVLKRYLSERVYPRLGKKAFTVLYVHTGVQRSENFA 84
           G D+ GR ++   GK+FPA+ + +E    YL + + P + K  + + Y HT +  + N+ 
Sbjct: 390 GVDRLGRPVIVFCGKWFPAQNIDLEKALLYLIKLLDP-IVKGDYVISYFHT-LTSTNNYP 447

Query: 85  GISALRSIYDAIPANVKENLQAVYFVHPGLQARLFLATFGRLFFNGVGGLYGKLRYVNRL 144
            +  LR +Y  +P   K+NL+A Y VHP    ++    F          +  K+  +  +
Sbjct: 448 SLHWLREVYSVLPYKYKKNLKAFYIVHPTFWTKMMTWWFTTFM---APAIKAKVHSLPGV 504

Query: 145 DYLWEHVRRHEVEIPEFVMDHD 166
           ++L+  + + ++EIP ++ ++D
Sbjct: 505 EHLYSAITKDQLEIPAYITEYD 526

Drosophila pseudoobscura pseudoobscura (taxid: 46245)

>sp|Q66H63|GDAP2_RAT Ganglioside-induced differentiation-associated-protein 2 OS=Rattus norvegicus GN=Gdap2 PE=2 SV=1

 Score = 69.7 bits (169), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 78/161 (48%), Gaps = 11/161 (6%)

Query: 9   SEQEELIDRLEIFKIHGRDKQGRKILRIIGKFFPARLLSVEVLKRYLSERVYPRLGKKAF 68
           SE    I  L+     G D  GR ++ ++G+  P  L+ ++    Y    V   +  K +
Sbjct: 328 SEDLSDIASLKALYQTGVDNCGRTVMVVVGRNIPVTLIDMDKALLYFI-HVMDHIAVKEY 386

Query: 69  TVLYVHTGVQRSENFAGISALRSIYDAIPANVKENLQAVYFVHPGLQARL---FLATFGR 125
            ++Y HT +    N      L+ +YD +    K NL+AVYFVHP  ++++   F  TF  
Sbjct: 387 VLVYFHT-LTSEYNHLDSDFLKKLYDVVDIKYKRNLKAVYFVHPTFRSKVSTWFFTTF-- 443

Query: 126 LFFNGVGGLYGKLRYVNRLDYLWEHVRRHEVEIPEFVMDHD 166
                V GL  K+ +V+ L  L+  +   +++ P FV+++D
Sbjct: 444 ----SVSGLKDKIHHVDSLQQLFSAISPEQIDFPPFVLEYD 480

Rattus norvegicus (taxid: 10116)

>sp|Q9NXN4|GDAP2_HUMAN Ganglioside-induced differentiation-associated protein 2 OS=Homo sapiens GN=GDAP2 PE=2 SV=1

 Score = 69.7 bits (169), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 78/161 (48%), Gaps = 11/161 (6%)

Query: 9   SEQEELIDRLEIFKIHGRDKQGRKILRIIGKFFPARLLSVEVLKRYLSERVYPRLGKKAF 68
           SE    I  L+     G D  GR ++ ++G+  P  L+ ++    Y    V   +  K +
Sbjct: 328 SEDLSDIASLKALYQTGVDNCGRTVMVVVGRNIPVTLIDMDKALLYFI-HVMDHIAVKEY 386

Query: 69  TVLYVHTGVQRSENFAGISALRSIYDAIPANVKENLQAVYFVHPGLQARL---FLATFGR 125
            ++Y HT +    N      L+ +YD +    K NL+AVYFVHP  ++++   F  TF  
Sbjct: 387 VLVYFHT-LTSEYNHLDSDFLKKLYDVVDVKYKRNLKAVYFVHPTFRSKVSTWFFTTF-- 443

Query: 126 LFFNGVGGLYGKLRYVNRLDYLWEHVRRHEVEIPEFVMDHD 166
                V GL  K+ +V+ L  L+  +   +++ P FV+++D
Sbjct: 444 ----SVSGLKDKIHHVDSLHQLFSAISPEQIDFPPFVLEYD 480

Homo sapiens (taxid: 9606)

>sp|Q4R678|GDAP2_MACFA Ganglioside-induced differentiation-associated protein 2 OS=Macaca fascicularis GN=GDAP2 PE=2 SV=1

 Score = 69.7 bits (169), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 78/161 (48%), Gaps = 11/161 (6%)

Query: 9   SEQEELIDRLEIFKIHGRDKQGRKILRIIGKFFPARLLSVEVLKRYLSERVYPRLGKKAF 68
           SE    I  L+     G D  GR ++ ++G+  P  L+ ++    Y    V   +  K +
Sbjct: 292 SEDLSDIASLKALYQTGVDNCGRTVMVVVGRNIPVTLIDMDKALLYFI-HVMDHIAVKEY 350

Query: 69  TVLYVHTGVQRSENFAGISALRSIYDAIPANVKENLQAVYFVHPGLQARL---FLATFGR 125
            ++Y HT +    N      L+ +YD +    K NL+AVYFVHP  ++++   F  TF  
Sbjct: 351 VLVYFHT-LTSEYNHLDSDFLKKLYDVVDVKYKRNLKAVYFVHPTFRSKVSTWFFTTF-- 407

Query: 126 LFFNGVGGLYGKLRYVNRLDYLWEHVRRHEVEIPEFVMDHD 166
                V GL  K+ +V+ L  L+  +   +++ P FV+++D
Sbjct: 408 ----SVSGLKDKIHHVDSLHQLFSAISPEQIDFPPFVLEYD 444

Macaca fascicularis (taxid: 9541)

>sp|Q2KIX2|GDAP2_BOVIN Ganglioside-induced differentiation-associated protein 2 OS=Bos taurus GN=GDAP2 PE=2 SV=1

 Score = 69.7 bits (169), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 78/161 (48%), Gaps = 11/161 (6%)

Query: 9   SEQEELIDRLEIFKIHGRDKQGRKILRIIGKFFPARLLSVEVLKRYLSERVYPRLGKKAF 68
           SE    I  L+     G D  GR ++ ++G+  P  L+ ++    Y    V   +  K +
Sbjct: 328 SEDLSDIASLKALYQTGVDNCGRTVMVVVGRNIPVTLIDMDKALLYFI-HVMDHIAVKEY 386

Query: 69  TVLYVHTGVQRSENFAGISALRSIYDAIPANVKENLQAVYFVHPGLQARL---FLATFGR 125
            ++Y HT +    N      L+ +YD +    K NL+AVYFVHP  ++++   F  TF  
Sbjct: 387 VLVYFHT-LTSEYNHLDSDFLKKLYDVVDVKYKRNLKAVYFVHPTFRSKVSTWFFTTF-- 443

Query: 126 LFFNGVGGLYGKLRYVNRLDYLWEHVRRHEVEIPEFVMDHD 166
                V GL  K+ +V+ L  L+  +   +++ P FV+++D
Sbjct: 444 ----SVSGLKDKIHHVDSLHQLFSAISPEQIDFPPFVLEYD 480

Bos taurus (taxid: 9913)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	206
319993062	199	Sec14 like protein [Nicotiana tabacum]	0.956	0.989	0.775	4e-87
319993060	199	Sec14 like protein [Nicotiana benthamian	0.956	0.989	0.77	1e-86
255579787	202	conserved hypothetical protein [Ricinus	0.975	0.995	0.764	1e-86
15237117	202	SEC14 cytosolic factor family protein /	0.980	1.0	0.747	2e-85
297798348	202	hypothetical protein ARALYDRAFT_491071 [	0.980	1.0	0.742	4e-85
21553817	202	unknown [Arabidopsis thaliana]	0.980	1.0	0.742	7e-85
217073614	203	unknown [Medicago truncatula]	0.893	0.906	0.808	2e-84
357483979	203	Ganglioside-induced differentiation-asso	0.893	0.906	0.803	1e-83
225431364	202	PREDICTED: ganglioside-induced different	0.980	1.0	0.781	7e-82
359807145	203	uncharacterized protein LOC100818380 [Gl	0.980	0.995	0.763	2e-81

>gi|319993062|dbj|BAJ61956.1| Sec14 like protein [Nicotiana tabacum]

 Score =  326 bits (835), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 155/200 (77%), Positives = 180/200 (90%), Gaps = 3/200 (1%)

Query: 7   SESEQEELIDRLEIFKIHGRDKQGRKILRIIGKFFPARLLSVEVLKRYLSERVYPRLGKK 66
           SE EQE+LI++LEIFKI GRDK+GRK LRIIGKFFPAR LSVEV+K+YL+E+++P L K+
Sbjct: 3   SEVEQEQLIEKLEIFKIQGRDKRGRKTLRIIGKFFPARNLSVEVVKKYLAEKIFPELEKR 62

Query: 67  AFTVLYVHTGVQRSENFAGISALRSIYDAIPANVKENLQAVYFVHPGLQARLFLATFGRL 126
            F V+YVHT V++SENF G+SALRS YDAIP  V+ENL+AVYF+HPGLQARLFLATFGR 
Sbjct: 63  PFAVVYVHTDVEKSENFPGVSALRSFYDAIPVKVRENLEAVYFLHPGLQARLFLATFGRF 122

Query: 127 FFNGVGGLYGKLRYVNRLDYLWEHVRRHEVEIPEFVMDHDEDLEYRPMMDYGLESDHRRV 186
            F+  GGLYGKLRYVNR+DYLWEHVRR+E+E+PEFV DHDEDLEYRPMMDYGLESDH RV
Sbjct: 123 IFS--GGLYGKLRYVNRVDYLWEHVRRNEIEMPEFVFDHDEDLEYRPMMDYGLESDHARV 180

Query: 187 YGAPAVDSPALSIYSMRCIS 206
           YGAPAVDSP +S+YSMRCIS
Sbjct: 181 YGAPAVDSP-VSMYSMRCIS 199

Source: Nicotiana tabacum

Species: Nicotiana tabacum

Genus: Nicotiana

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|319993060|dbj|BAJ61955.1| Sec14 like protein [Nicotiana benthamiana]

 Score =  324 bits (831), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 154/200 (77%), Positives = 180/200 (90%), Gaps = 3/200 (1%)

Query: 7   SESEQEELIDRLEIFKIHGRDKQGRKILRIIGKFFPARLLSVEVLKRYLSERVYPRLGKK 66
           SE EQE+LI++LEIFKI GRDK+GRK LRIIGKFFPAR LSVEV+K+YL+E+++P L K+
Sbjct: 3   SEVEQEQLIEKLEIFKIQGRDKRGRKTLRIIGKFFPARNLSVEVVKKYLAEKIFPELEKR 62

Query: 67  AFTVLYVHTGVQRSENFAGISALRSIYDAIPANVKENLQAVYFVHPGLQARLFLATFGRL 126
            F V+YVHT V++SENF G+SALRS YDAIP  V+ENL+AVYF+HPGLQARLFLATFGR 
Sbjct: 63  PFAVVYVHTDVEKSENFPGVSALRSFYDAIPVKVRENLEAVYFLHPGLQARLFLATFGRF 122

Query: 127 FFNGVGGLYGKLRYVNRLDYLWEHVRRHEVEIPEFVMDHDEDLEYRPMMDYGLESDHRRV 186
            F+  GGLYGKLRYVNR+DYLW+HVRR+E+E+PEFV DHDEDLEYRPMMDYGLESDH RV
Sbjct: 123 IFS--GGLYGKLRYVNRVDYLWKHVRRNEIEMPEFVFDHDEDLEYRPMMDYGLESDHARV 180

Query: 187 YGAPAVDSPALSIYSMRCIS 206
           YGAPAVDSP +S+YSMRCIS
Sbjct: 181 YGAPAVDSP-VSMYSMRCIS 199

Source: Nicotiana benthamiana

Species: Nicotiana benthamiana

Genus: Nicotiana

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255579787|ref|XP_002530731.1| conserved hypothetical protein [Ricinus communis] gi|223529695|gb|EEF31637.1| conserved hypothetical protein [Ricinus communis]

 Score =  324 bits (831), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 156/204 (76%), Positives = 180/204 (88%), Gaps = 3/204 (1%)

Query: 3   SQVVSESEQEELIDRLEIFKIHGRDKQGRKILRIIGKFFPARLLSVEVLKRYLSERVYPR 62
           S  +S +EQ +LI++LEIFKI GRDK G  ILRIIGKFFPAR+++V+ LK YL E++YPR
Sbjct: 2   STHISYAEQHQLIEKLEIFKILGRDKHGHNILRIIGKFFPARIITVDALKSYLEEKIYPR 61

Query: 63  LGKKAFTVLYVHTGVQRSENFAGISALRSIYDAIPANVKENLQAVYFVHPGLQARLFLAT 122
           L  K F+VLYVHTGVQRSENF GISALRS+YD+IP  VKENLQA+YF+HPGLQARLFLAT
Sbjct: 62  LETKPFSVLYVHTGVQRSENFPGISALRSVYDSIPIKVKENLQALYFLHPGLQARLFLAT 121

Query: 123 FGRLFFNGVGGLYGKLRYVNRLDYLWEHVRRHEVEIPEFVMDHDEDLEYRPMMDYGLESD 182
           FGR  F+  GGLYGKLRY++R+DYLW+HVRR+EVEIPEFV DHDEDLEYRPMMDYGLESD
Sbjct: 122 FGRFLFS--GGLYGKLRYISRIDYLWDHVRRNEVEIPEFVHDHDEDLEYRPMMDYGLESD 179

Query: 183 HRRVYGAPAVDSPALSIYSMRCIS 206
           H RVYGAPAVDSP +S+YSMRCIS
Sbjct: 180 HPRVYGAPAVDSP-VSMYSMRCIS 202

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15237117|ref|NP_195300.1| SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein [Arabidopsis thaliana] gi|3367593|emb|CAA20045.1| putative protein [Arabidopsis thaliana] gi|7270527|emb|CAB81484.1| putative protein [Arabidopsis thaliana] gi|17473778|gb|AAL38324.1| putative protein [Arabidopsis thaliana] gi|30725562|gb|AAP37803.1| At4g35750 [Arabidopsis thaliana] gi|332661158|gb|AEE86558.1| SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein [Arabidopsis thaliana]

 Score =  320 bits (821), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 154/206 (74%), Positives = 183/206 (88%), Gaps = 4/206 (1%)

Query: 1   MCSQVVSESEQEELIDRLEIFKIHGRDKQGRKILRIIGKFFPARLLSVEVLKRYLSERVY 60
           M SQ+ SE EQE+LI++LEIFKIHGRDK+GRKILRIIGKFFPAR LS++VLK+YL E+++
Sbjct: 1   MSSQI-SEIEQEQLIEKLEIFKIHGRDKRGRKILRIIGKFFPARFLSLDVLKKYLEEKIF 59

Query: 61  PRLGKKAFTVLYVHTGVQRSENFAGISALRSIYDAIPANVKENLQAVYFVHPGLQARLFL 120
           PRLG+K F VLYVHTGVQRSENF GISALR+IYDAIP NV++NLQ VYF+HPGLQ+RLFL
Sbjct: 60  PRLGRKPFAVLYVHTGVQRSENFPGISALRAIYDAIPVNVRDNLQEVYFLHPGLQSRLFL 119

Query: 121 ATFGRLFFNGVGGLYGKLRYVNRLDYLWEHVRRHEVEIPEFVMDHDEDLEYRPMMDYGLE 180
           AT GR  F+  GGLYGKLRY++R+DYLWEHVRR+E+E+PEFV DHD+DLEYRPMMDYG E
Sbjct: 120 ATCGRFLFS--GGLYGKLRYISRVDYLWEHVRRNEIEMPEFVYDHDDDLEYRPMMDYGQE 177

Query: 181 SDHRRVYGAPAVDSPALSIYSMRCIS 206
           SDH RV+   AVDS ++S +SMRCIS
Sbjct: 178 SDHARVFAGAAVDS-SVSSFSMRCIS 202

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297798348|ref|XP_002867058.1| hypothetical protein ARALYDRAFT_491071 [Arabidopsis lyrata subsp. lyrata] gi|297312894|gb|EFH43317.1| hypothetical protein ARALYDRAFT_491071 [Arabidopsis lyrata subsp. lyrata]

 Score =  319 bits (817), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 153/206 (74%), Positives = 182/206 (88%), Gaps = 4/206 (1%)

Query: 1   MCSQVVSESEQEELIDRLEIFKIHGRDKQGRKILRIIGKFFPARLLSVEVLKRYLSERVY 60
           M SQ+ SE EQE+LI++LEIFKIHGRDK+GRKILRIIGKFFPAR LS++VLK+YL E+++
Sbjct: 1   MSSQI-SEIEQEQLIEKLEIFKIHGRDKRGRKILRIIGKFFPARFLSLDVLKKYLEEKIF 59

Query: 61  PRLGKKAFTVLYVHTGVQRSENFAGISALRSIYDAIPANVKENLQAVYFVHPGLQARLFL 120
           PRLG+K F VLYVHTGVQRSENF GISALR+IYDAIP NV++NLQ VYF+HPGLQ+RLFL
Sbjct: 60  PRLGRKPFAVLYVHTGVQRSENFPGISALRAIYDAIPVNVRDNLQEVYFLHPGLQSRLFL 119

Query: 121 ATFGRLFFNGVGGLYGKLRYVNRLDYLWEHVRRHEVEIPEFVMDHDEDLEYRPMMDYGLE 180
           AT GR  F+  GGLYGKLRY++R+DYLWEHVRR+E+E+PEFV DHD+DLEYRPMMDYG E
Sbjct: 120 ATCGRFLFS--GGLYGKLRYISRVDYLWEHVRRNEIEMPEFVYDHDDDLEYRPMMDYGQE 177

Query: 181 SDHRRVYGAPAVDSPALSIYSMRCIS 206
           SDH RV+    VDS ++S +SMRCIS
Sbjct: 178 SDHARVFAGATVDS-SVSSFSMRCIS 202

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|21553817|gb|AAM62910.1| unknown [Arabidopsis thaliana]

 Score =  318 bits (816), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 153/206 (74%), Positives = 182/206 (88%), Gaps = 4/206 (1%)

Query: 1   MCSQVVSESEQEELIDRLEIFKIHGRDKQGRKILRIIGKFFPARLLSVEVLKRYLSERVY 60
           M SQ+ SE EQE+LI++LEIFKIHGRDK+GRKILRIIGKFFPAR LS++VLK+YL E+++
Sbjct: 1   MSSQI-SEIEQEQLIEKLEIFKIHGRDKRGRKILRIIGKFFPARFLSLDVLKKYLEEKIF 59

Query: 61  PRLGKKAFTVLYVHTGVQRSENFAGISALRSIYDAIPANVKENLQAVYFVHPGLQARLFL 120
           PRLG+K F VLYVHTGVQRSENF GISALR+IYDAIP NV++NLQ VYF+HPGLQ+RLFL
Sbjct: 60  PRLGRKPFAVLYVHTGVQRSENFPGISALRAIYDAIPVNVRDNLQEVYFLHPGLQSRLFL 119

Query: 121 ATFGRLFFNGVGGLYGKLRYVNRLDYLWEHVRRHEVEIPEFVMDHDEDLEYRPMMDYGLE 180
           AT GR  F+  GGLYGKL Y++R+DYLWEHVRR+E+E+PEFV DHD+DLEYRPMMDYG E
Sbjct: 120 ATCGRFLFS--GGLYGKLTYISRVDYLWEHVRRNEIEMPEFVYDHDDDLEYRPMMDYGQE 177

Query: 181 SDHRRVYGAPAVDSPALSIYSMRCIS 206
           SDH RV+   AVDS ++S +SMRCIS
Sbjct: 178 SDHARVFAGAAVDS-SVSSFSMRCIS 202

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|217073614|gb|ACJ85167.1| unknown [Medicago truncatula]

 Score =  317 bits (811), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 152/188 (80%), Positives = 171/188 (90%), Gaps = 4/188 (2%)

Query: 20  IFKIHGRDKQGRKILRIIGKFFPARLLSVEVLKRYLSERVYPRLGKKAFTVLYVHTGVQR 79
           +FKI GRDK GRKILRIIGKFFPARL+SVEVLK++L ER++P+LGKK F VLY+HTGVQR
Sbjct: 19  VFKIKGRDKHGRKILRIIGKFFPARLVSVEVLKKFLEERIFPKLGKKKFAVLYIHTGVQR 78

Query: 80  SENFAGISALRSIYDAIPANVKENLQAVYFVHPGLQARLFLATFGRLFFNGVGGLYGKLR 139
           SENFAGIS+LRS+YDAIPANVKENL+AVYF+HPGLQARLFLATFGR FFN   GLY KLR
Sbjct: 79  SENFAGISSLRSVYDAIPANVKENLEAVYFIHPGLQARLFLATFGRFFFN--AGLYRKLR 136

Query: 140 YVNRLDYLWEHVRRHEVEIPEFVMDHDEDLEYRPMMDYGLESDHRRVYG-APAVDSPALS 198
           Y++R+ YLWE+VRR EVEIPEFV DHDEDLEYRPMMDYGLESDH RVYG APA+DSP ++
Sbjct: 137 YISRIGYLWENVRRTEVEIPEFVYDHDEDLEYRPMMDYGLESDHARVYGTAPALDSP-VT 195

Query: 199 IYSMRCIS 206
            YSMRCIS
Sbjct: 196 TYSMRCIS 203

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357483979|ref|XP_003612276.1| Ganglioside-induced differentiation-associated protein [Medicago truncatula] gi|355513611|gb|AES95234.1| Ganglioside-induced differentiation-associated protein [Medicago truncatula] gi|388500088|gb|AFK38110.1| unknown [Medicago truncatula]

 Score =  314 bits (805), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 151/188 (80%), Positives = 170/188 (90%), Gaps = 4/188 (2%)

Query: 20  IFKIHGRDKQGRKILRIIGKFFPARLLSVEVLKRYLSERVYPRLGKKAFTVLYVHTGVQR 79
           +FKI GRDK GRKILRIIGKFFPARL+SVEVLK++L ER++P+LGKK F VLY+HTGVQR
Sbjct: 19  VFKIKGRDKHGRKILRIIGKFFPARLVSVEVLKKFLEERIFPKLGKKKFAVLYIHTGVQR 78

Query: 80  SENFAGISALRSIYDAIPANVKENLQAVYFVHPGLQARLFLATFGRLFFNGVGGLYGKLR 139
           SENFAGIS+LRS+YDAIPANVKENL+AVYF+HPGLQARLFLATFGR  FN   GLY KLR
Sbjct: 79  SENFAGISSLRSVYDAIPANVKENLEAVYFIHPGLQARLFLATFGRFLFN--AGLYRKLR 136

Query: 140 YVNRLDYLWEHVRRHEVEIPEFVMDHDEDLEYRPMMDYGLESDHRRVYG-APAVDSPALS 198
           Y++R+ YLWE+VRR EVEIPEFV DHDEDLEYRPMMDYGLESDH RVYG APA+DSP ++
Sbjct: 137 YISRIGYLWENVRRTEVEIPEFVYDHDEDLEYRPMMDYGLESDHARVYGTAPALDSP-VT 195

Query: 199 IYSMRCIS 206
            YSMRCIS
Sbjct: 196 TYSMRCIS 203

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225431364|ref|XP_002278653.1| PREDICTED: ganglioside-induced differentiation-associated protein 2 [Vitis vinifera] gi|297742206|emb|CBI34355.3| unnamed protein product [Vitis vinifera]

 Score =  308 bits (790), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 161/206 (78%), Positives = 187/206 (90%), Gaps = 4/206 (1%)

Query: 1   MCSQVVSESEQEELIDRLEIFKIHGRDKQGRKILRIIGKFFPARLLSVEVLKRYLSERVY 60
           MC+Q  S SEQE+L+++LEIFKI GRDK+GRKILRIIGK+FPAR LSV+V+K+YL ++++
Sbjct: 1   MCAQA-SPSEQEQLVEKLEIFKIRGRDKRGRKILRIIGKYFPARTLSVDVVKKYLEDKIF 59

Query: 61  PRLGKKAFTVLYVHTGVQRSENFAGISALRSIYDAIPANVKENLQAVYFVHPGLQARLFL 120
           P+LGKK F+VLYVHT V+RSENF GISALRSIY+AIP NVKENL+AVYFVHPGLQ+RLFL
Sbjct: 60  PKLGKKQFSVLYVHTDVERSENFPGISALRSIYEAIPVNVKENLEAVYFVHPGLQSRLFL 119

Query: 121 ATFGRLFFNGVGGLYGKLRYVNRLDYLWEHVRRHEVEIPEFVMDHDEDLEYRPMMDYGLE 180
           ATFGRL     GGLYGKLRYVNRLD LWEHVRR+E+EIP+FV DHDE+LEYRPMMDYGLE
Sbjct: 120 ATFGRL--LLGGGLYGKLRYVNRLDLLWEHVRRNEIEIPDFVYDHDEELEYRPMMDYGLE 177

Query: 181 SDHRRVYGAPAVDSPALSIYSMRCIS 206
           SDH RVYGAPAVDSP +S+YSMRCIS
Sbjct: 178 SDHPRVYGAPAVDSP-VSMYSMRCIS 202

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359807145|ref|NP_001241352.1| uncharacterized protein LOC100818380 [Glycine max] gi|255640836|gb|ACU20701.1| unknown [Glycine max]

 Score =  307 bits (787), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 158/207 (76%), Positives = 183/207 (88%), Gaps = 5/207 (2%)

Query: 1   MCSQVVSESEQEELIDRLEIFKIHGRDKQGRKILRIIGKFFPARLLSVEVLKRYLSERVY 60
           MCS  +S+ EQEEL+++LE+FKI GRDK GRKILRII K FPARL+SV+VLK+YL ++V+
Sbjct: 1   MCS-AISQVEQEELLEKLEVFKIKGRDKHGRKILRIIAKLFPARLVSVDVLKKYLEDKVF 59

Query: 61  PRLGKKAFTVLYVHTGVQRSENFAGISALRSIYDAIPANVKENLQAVYFVHPGLQARLFL 120
           P+LGK+ F VLYVHTGVQRSENF GIS LR IYD+IPANVKENL+AVYF+HPGLQARLFL
Sbjct: 60  PKLGKRKFVVLYVHTGVQRSENFPGISGLRWIYDSIPANVKENLEAVYFIHPGLQARLFL 119

Query: 121 ATFGRLFFNGVGGLYGKLRYVNRLDYLWEHVRRHEVEIPEFVMDHDEDLEYRPMMDYGLE 180
           ATFGR  FN   GLYGKLRYV+R+DYLWE+VRR+EVEIPEFV DHDEDL+YRPMMDYGLE
Sbjct: 120 ATFGRFLFN--AGLYGKLRYVSRVDYLWENVRRNEVEIPEFVFDHDEDLDYRPMMDYGLE 177

Query: 181 SDHRRVY-GAPAVDSPALSIYSMRCIS 206
           SDH RVY GAP +DSP ++ YSMRCIS
Sbjct: 178 SDHARVYGGAPTMDSP-VTTYSMRCIS 203

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	206
TAIR|locus:2128018	202	AT4G35750 "AT4G35750" [Arabido	0.922	0.940	0.756	3e-78
TAIR|locus:2076234	237	AT3G10210 "AT3G10210" [Arabido	0.917	0.797	0.447	1.9e-44
UNIPROTKB|E1C8K9	496	GDAP2 "Uncharacterized protein	0.689	0.286	0.285	3.9e-14
ZFIN|ZDB-GENE-040912-31	504	gdap2 "ganglioside induced dif	0.665	0.271	0.295	3.8e-13
UNIPROTKB|Q2KIX2	497	GDAP2 "Ganglioside-induced dif	0.665	0.275	0.281	4.7e-13
UNIPROTKB|E2RCF0	497	GDAP2 "Uncharacterized protein	0.665	0.275	0.281	4.7e-13
UNIPROTKB|Q9NXN4	497	GDAP2 "Ganglioside-induced dif	0.665	0.275	0.281	4.7e-13
UNIPROTKB|F1SAY8	497	GDAP2 "Uncharacterized protein	0.665	0.275	0.281	4.7e-13
RGD|1306050	497	Gdap2 "ganglioside-induced dif	0.665	0.275	0.281	4.7e-13
UNIPROTKB|Q66H63	497	Gdap2 "Ganglioside-induced dif	0.665	0.275	0.281	4.7e-13

TAIR|locus:2128018 AT4G35750 "AT4G35750" [Arabidopsis thaliana (taxid:3702)]

 Score = 787 (282.1 bits), Expect = 3.0e-78, P = 3.0e-78
 Identities = 146/193 (75%), Positives = 173/193 (89%)

Query:    14 LIDRLEIFKIHGRDKQGRKILRIIGKFFPARLLSVEVLKRYLSERVYPRLGKKAFTVLYV 73
             LI++LEIFKIHGRDK+GRKILRIIGKFFPAR LS++VLK+YL E+++PRLG+K F VLYV
Sbjct:    13 LIEKLEIFKIHGRDKRGRKILRIIGKFFPARFLSLDVLKKYLEEKIFPRLGRKPFAVLYV 72

Query:    74 HTGVQRSENFAGISALRSIYDAIPANVKENLQAVYFVHPGLQARLFLATFGRLFFNGVGG 133
             HTGVQRSENF GISALR+IYDAIP NV++NLQ VYF+HPGLQ+RLFLAT GR  F+G  G
Sbjct:    73 HTGVQRSENFPGISALRAIYDAIPVNVRDNLQEVYFLHPGLQSRLFLATCGRFLFSG--G 130

Query:   134 LYGKLRYVNRLDYLWEHVRRHEVEIPEFVMDHDEDLEYRPMMDYGLESDHRRVYGAPAVD 193
             LYGKLRY++R+DYLWEHVRR+E+E+PEFV DHD+DLEYRPMMDYG ESDH RV+   AVD
Sbjct:   131 LYGKLRYISRVDYLWEHVRRNEIEMPEFVYDHDDDLEYRPMMDYGQESDHARVFAGAAVD 190

Query:   194 SPALSIYSMRCIS 206
             S ++S +SMRCIS
Sbjct:   191 S-SVSSFSMRCIS 202

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2076234 AT3G10210 "AT3G10210" [Arabidopsis thaliana (taxid:3702)]

 Score = 468 (169.8 bits), Expect = 1.9e-44, P = 1.9e-44
 Identities = 86/192 (44%), Positives = 137/192 (71%)

Query:    15 IDRLEIFKIHGRDKQGRKILRIIGKFFPARLLSVEVLKRYLSERVYPRLGKKAFTVLYVH 74
             +D L+ F + G D+ G +I RI+GK+FPAR++S E LK+Y+S+++  +  +    ++Y+H
Sbjct:    49 LDLLQFFTLQGLDRSGNRIFRIVGKYFPARVVSAERLKKYISQKISNQCPEGPLCLVYMH 108

Query:    75 TGVQRSENFAGISALRSIYDAIPANVKENLQAVYFVHPGLQARLFLATFGRLFFNGVGGL 134
             + VQ+ +N  GI+ LR IY+ +P+++K+ LQ VYF+HPGL++RL +AT GRL  +G  GL
Sbjct:   109 STVQKDDNSPGITILRWIYEDLPSDIKDRLQLVYFIHPGLRSRLVIATLGRLLLSG--GL 166

Query:   135 YGKLRYVNRLDYLWEHVRRHEVEIPEFVMDHDEDLEYRPMMDYGLESDHRRVYGAPAVDS 194
             Y K++YV+RL YLWE +++ EVEIP+FV +HD  LE+RP+ DYG+E D  ++    +  S
Sbjct:   167 YWKIKYVSRLQYLWEDIKKGEVEIPDFVKNHDNVLEHRPLTDYGIEPDPFQLSEVQS-SS 225

Query:   195 PALSIYSMRCIS 206
              +L+ Y  R +S
Sbjct:   226 FSLNRYENRWVS 237

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=ISM

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|E1C8K9 GDAP2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 190 (71.9 bits), Expect = 3.9e-14, P = 3.9e-14
 Identities = 42/147 (28%), Positives = 79/147 (53%)

Query:    20 IFKIHGRDKQGRKILRIIGKFFPARLLSVEVLKRYLSERVYPRLGKKAFTVLYVHTGVQR 79
             +++  G D  GR ++ ++G+  P  L+ +E    Y    V   +  K + ++Y HT +  
Sbjct:   338 LYQTVGVDNCGRTVMVVVGRNIPVTLIDMEKALLYFIH-VMDHIAVKEYVLVYFHT-LTN 395

Query:    80 SENFAGISALRSIYDAIPANVKENLQAVYFVHPGLQARLFLATFGRLFFNGVGGLYGKLR 139
               N    + L+ +YD + A  K NL+A+YFVHP  ++++  +T+    F  V GL  K+ 
Sbjct:   396 DYNQLDSNFLKKLYDVVDAKYKRNLKALYFVHPTFRSKV--STWFFTTFT-VSGLKDKIH 452

Query:   140 YVNRLDYLWEHVRRHEVEIPEFVMDHD 166
             YV  L  L+  +   ++++P FV+++D
Sbjct:   453 YVESLQQLFTAIPPEQIDLPPFVLEYD 479

GO:0032526 "response to retinoic acid" evidence=IEA

ZFIN|ZDB-GENE-040912-31 gdap2 "ganglioside induced differentiation associated protein 2" [Danio rerio (taxid:7955)]

 Score = 181 (68.8 bits), Expect = 3.8e-13, P = 3.8e-13
 Identities = 42/142 (29%), Positives = 76/142 (53%)

Query:    25 GRDKQGRKILRIIGKFFPARLLSVEVLKRYLSERVYPRLGKKAFTVLYVHTGVQRSENFA 84
             G D  GR ++ ++G+  P  L+ +E    Y    V   +  K + ++Y HT +    N  
Sbjct:   353 GVDLCGRTVMVVVGRNIPVMLIDMEKALLYFIH-VMDHITVKEYVMVYFHT-LTGEHNHL 410

Query:    85 GISALRSIYDAIPANVKENLQAVYFVHPGLQARLFLATFGRLFFNGVGGLYGKLRYVNRL 144
                 L+ +YD + A  K+NL+A YFVHP  ++++  +T+    F+ V GL  K+ ++  L
Sbjct:   411 DTDFLKKLYDIVDAKFKKNLRAFYFVHPTFRSKV--STWFFTTFS-VSGLKDKVHHIENL 467

Query:   145 DYLWEHVRRHEVEIPEFVMDHD 166
               L+  V   +++IP FV+++D
Sbjct:   468 QQLFTCVLPEQIDIPPFVLEYD 489

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

UNIPROTKB|Q2KIX2 GDAP2 "Ganglioside-induced differentiation-associated protein 2" [Bos taurus (taxid:9913)]

 Score = 180 (68.4 bits), Expect = 4.7e-13, P = 4.7e-13
 Identities = 40/142 (28%), Positives = 75/142 (52%)

Query:    25 GRDKQGRKILRIIGKFFPARLLSVEVLKRYLSERVYPRLGKKAFTVLYVHTGVQRSENFA 84
             G D  GR ++ ++G+  P  L+ ++    Y    V   +  K + ++Y HT +    N  
Sbjct:   344 GVDNCGRTVMVVVGRNIPVTLIDMDKALLYFIH-VMDHIAVKEYVLVYFHT-LTSEYNHL 401

Query:    85 GISALRSIYDAIPANVKENLQAVYFVHPGLQARLFLATFGRLFFNGVGGLYGKLRYVNRL 144
                 L+ +YD +    K NL+AVYFVHP  ++++  +T+    F+ V GL  K+ +V+ L
Sbjct:   402 DSDFLKKLYDVVDVKYKRNLKAVYFVHPTFRSKV--STWFFTTFS-VSGLKDKIHHVDSL 458

Query:   145 DYLWEHVRRHEVEIPEFVMDHD 166
               L+  +   +++ P FV+++D
Sbjct:   459 HQLFSAISPEQIDFPPFVLEYD 480

GO:0032526 "response to retinoic acid" evidence=IEA

UNIPROTKB|E2RCF0 GDAP2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 180 (68.4 bits), Expect = 4.7e-13, P = 4.7e-13
 Identities = 40/142 (28%), Positives = 75/142 (52%)

Query:    25 GRDKQGRKILRIIGKFFPARLLSVEVLKRYLSERVYPRLGKKAFTVLYVHTGVQRSENFA 84
             G D  GR ++ ++G+  P  L+ ++    Y    V   +  K + ++Y HT +    N  
Sbjct:   344 GVDNCGRTVMVVVGRNIPVTLIDMDKALLYFIH-VMDHIAVKEYVLVYFHT-LTSEYNHL 401

Query:    85 GISALRSIYDAIPANVKENLQAVYFVHPGLQARLFLATFGRLFFNGVGGLYGKLRYVNRL 144
                 L+ +YD +    K NL+AVYFVHP  ++++  +T+    F+ V GL  K+ +V+ L
Sbjct:   402 DSDFLKKLYDVVDVKYKRNLKAVYFVHPTFRSKV--STWFFTTFS-VSGLKDKIHHVDSL 458

Query:   145 DYLWEHVRRHEVEIPEFVMDHD 166
               L+  +   +++ P FV+++D
Sbjct:   459 HQLFSAISPEQIDFPPFVLEYD 480

GO:0032526 "response to retinoic acid" evidence=IEA

UNIPROTKB|Q9NXN4 GDAP2 "Ganglioside-induced differentiation-associated protein 2" [Homo sapiens (taxid:9606)]

 Score = 180 (68.4 bits), Expect = 4.7e-13, P = 4.7e-13
 Identities = 40/142 (28%), Positives = 75/142 (52%)

Query:    25 GRDKQGRKILRIIGKFFPARLLSVEVLKRYLSERVYPRLGKKAFTVLYVHTGVQRSENFA 84
             G D  GR ++ ++G+  P  L+ ++    Y    V   +  K + ++Y HT +    N  
Sbjct:   344 GVDNCGRTVMVVVGRNIPVTLIDMDKALLYFIH-VMDHIAVKEYVLVYFHT-LTSEYNHL 401

Query:    85 GISALRSIYDAIPANVKENLQAVYFVHPGLQARLFLATFGRLFFNGVGGLYGKLRYVNRL 144
                 L+ +YD +    K NL+AVYFVHP  ++++  +T+    F+ V GL  K+ +V+ L
Sbjct:   402 DSDFLKKLYDVVDVKYKRNLKAVYFVHPTFRSKV--STWFFTTFS-VSGLKDKIHHVDSL 458

Query:   145 DYLWEHVRRHEVEIPEFVMDHD 166
               L+  +   +++ P FV+++D
Sbjct:   459 HQLFSAISPEQIDFPPFVLEYD 480

GO:0032526 "response to retinoic acid" evidence=IEA

UNIPROTKB|F1SAY8 GDAP2 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 180 (68.4 bits), Expect = 4.7e-13, P = 4.7e-13
 Identities = 40/142 (28%), Positives = 75/142 (52%)

Query:    25 GRDKQGRKILRIIGKFFPARLLSVEVLKRYLSERVYPRLGKKAFTVLYVHTGVQRSENFA 84
             G D  GR ++ ++G+  P  L+ ++    Y    V   +  K + ++Y HT +    N  
Sbjct:   344 GVDNCGRTVMVVVGRNIPVTLIDMDKALLYFIH-VMDHIAVKEYVLVYFHT-LTSEYNHL 401

Query:    85 GISALRSIYDAIPANVKENLQAVYFVHPGLQARLFLATFGRLFFNGVGGLYGKLRYVNRL 144
                 L+ +YD +    K NL+AVYFVHP  ++++  +T+    F+ V GL  K+ +V+ L
Sbjct:   402 DSDFLKKLYDVVDVKYKRNLKAVYFVHPTFRSKV--STWFFTTFS-VSGLKDKIHHVDSL 458

Query:   145 DYLWEHVRRHEVEIPEFVMDHD 166
               L+  +   +++ P FV+++D
Sbjct:   459 HQLFSAISPEQIDFPPFVLEYD 480

GO:0032526 "response to retinoic acid" evidence=IEA

RGD|1306050 Gdap2 "ganglioside-induced differentiation-associated-protein 2" [Rattus norvegicus (taxid:10116)]

 Score = 180 (68.4 bits), Expect = 4.7e-13, P = 4.7e-13
 Identities = 40/142 (28%), Positives = 75/142 (52%)

Query:    25 GRDKQGRKILRIIGKFFPARLLSVEVLKRYLSERVYPRLGKKAFTVLYVHTGVQRSENFA 84
             G D  GR ++ ++G+  P  L+ ++    Y    V   +  K + ++Y HT +    N  
Sbjct:   344 GVDNCGRTVMVVVGRNIPVTLIDMDKALLYFIH-VMDHIAVKEYVLVYFHT-LTSEYNHL 401

Query:    85 GISALRSIYDAIPANVKENLQAVYFVHPGLQARLFLATFGRLFFNGVGGLYGKLRYVNRL 144
                 L+ +YD +    K NL+AVYFVHP  ++++  +T+    F+ V GL  K+ +V+ L
Sbjct:   402 DSDFLKKLYDVVDIKYKRNLKAVYFVHPTFRSKV--STWFFTTFS-VSGLKDKIHHVDSL 458

Query:   145 DYLWEHVRRHEVEIPEFVMDHD 166
               L+  +   +++ P FV+++D
Sbjct:   459 QQLFSAISPEQIDFPPFVLEYD 480

GO:0032526 "response to retinoic acid" evidence=IEA;ISO

UNIPROTKB|Q66H63 Gdap2 "Ganglioside-induced differentiation-associated-protein 2" [Rattus norvegicus (taxid:10116)]

 Score = 180 (68.4 bits), Expect = 4.7e-13, P = 4.7e-13
 Identities = 40/142 (28%), Positives = 75/142 (52%)

Query:    25 GRDKQGRKILRIIGKFFPARLLSVEVLKRYLSERVYPRLGKKAFTVLYVHTGVQRSENFA 84
             G D  GR ++ ++G+  P  L+ ++    Y    V   +  K + ++Y HT +    N  
Sbjct:   344 GVDNCGRTVMVVVGRNIPVTLIDMDKALLYFIH-VMDHIAVKEYVLVYFHT-LTSEYNHL 401

Query:    85 GISALRSIYDAIPANVKENLQAVYFVHPGLQARLFLATFGRLFFNGVGGLYGKLRYVNRL 144
                 L+ +YD +    K NL+AVYFVHP  ++++  +T+    F+ V GL  K+ +V+ L
Sbjct:   402 DSDFLKKLYDVVDIKYKRNLKAVYFVHPTFRSKV--STWFFTTFS-VSGLKDKIHHVDSL 458

Query:   145 DYLWEHVRRHEVEIPEFVMDHD 166
               L+  +   +++ P FV+++D
Sbjct:   459 QQLFSAISPEQIDFPPFVLEYD 480

GO:0032526 "response to retinoic acid" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	AT4G35750	Rho-GTPase-activating protein-related; Rho-GTPase-activating protein-related; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- cellular_component unknown; EXPRESSED IN- 22 plant structures; EXPRESSED DURING- 13 growth stages; CONTAINS InterPro DOMAIN/s- Cellular retinaldehyde-binding/triple function, C-terminal (InterPro-IPR001251); BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-AT3G10210.1); Has 313 Blast hits to 313 proteins in 57 species- Archae - 0; Bacteria - 0; Metazoa - 237; Fungi - 0; Plants - 68; Viruses - 0; Oth [...] (202 aa)
		(Arabidopsis thaliana)
Predicted Functional Partners:
	AT5G20700	senescence-associated protein-related; senescence-associated protein-related; INVOLVED IN- biol [...] (248 aa)							•		0.921
	AT1G68440	unknown protein; unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biolog [...] (306 aa)				•			•		0.803
	AT4G19860	lecithin-cholesterol acyltransferase family protein / LACT family protein; lecithin-cholesterol [...] (535 aa)				•					0.688
	AT1G31690	amine oxidase/ copper ion binding / quinone binding; amine oxidase/ copper ion binding / quinon [...] (677 aa)							•		0.675
	AT3G51730	saposin B domain-containing protein; saposin B domain-containing protein; FUNCTIONS IN- molecul [...] (213 aa)				•					0.665
	AT1G56220	dormancy/auxin associated family protein; dormancy/auxin associated family protein; FUNCTIONS I [...] (140 aa)				•					0.649
	HGO	HGO (HOMOGENTISATE 1,2-DIOXYGENASE); homogentisate 1,2-dioxygenase; homogentisate 1,2-dioxygena [...] (461 aa)				•					0.647
	GAMMA-VPE	GAMMA-VPE (GAMMA VACUOLAR PROCESSING ENZYME); cysteine-type endopeptidase; Encodes a vacuolar p [...] (494 aa)				•					0.645
	KING1	KING1 (SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT GAMMA 1); SNF1-RELATED PROTEIN KINASE REG [...] (424 aa)				•					0.641
	ATG8F	ATG8F (autophagy 8f); microtubule binding; autophagy 8f (ATG8F); FUNCTIONS IN- microtubule bind [...] (121 aa)				•					0.637

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	206
pfam13716	149	pfam13716, CRAL_TRIO_2, Divergent CRAL/TRIO domain	4e-35
smart00516	158	smart00516, SEC14, Domain in homologues of a S	5e-14
cd00170	157	cd00170, SEC14, Sec14p-like lipid-binding domain	8e-09

>gnl|CDD|222339 pfam13716, CRAL_TRIO_2, Divergent CRAL/TRIO domain

 Score =  120 bits (304), Expect = 4e-35
 Identities = 52/151 (34%), Positives = 74/151 (49%), Gaps = 5/151 (3%)

Query: 20  IFKIHGRDKQGRKILRIIGKFFPAR-LLSVEVLKRYLSERVYPRLGKKAFTVLYVHTGVQ 78
            F   GRDK+GR +L    K  PA  L  ++ L  YL   +   L  K F V+  HTGV 
Sbjct: 2   AFLSGGRDKEGRPVLVFDAKRLPASDLDDLDRLLFYLLSILSEELKPKGFVVVIDHTGVT 61

Query: 79  RSENFAGISALRSIYDAIPANVKENLQAVYFVHPGLQARLFLATFGRLFFNGVGGLYGKL 138
           R  N    S L+ +Y  +P    +NL+AVY VHP    + FL T GRLF         K+
Sbjct: 62  R--NKPSWSWLKKLYKLLPRAFPKNLKAVYIVHPSTFLKKFLKTLGRLFS-SKKLFKKKV 118

Query: 139 RYVNRLDYLWEHVRRHEVEIP-EFVMDHDED 168
            YV+ L  L E++   ++ +    V+ +D +
Sbjct: 119 IYVSSLSELSEYIDPTQLPLELGGVLSYDHE 149

This family includes divergent members of the CRAL-TRIO domain family. This family includes ECM25 that contains a divergent CRAL-TRIO domain identified by Gallego and colleagues. Length = 149

>gnl|CDD|214706 smart00516, SEC14, Domain in homologues of a S

 Score = 66.6 bits (163), Expect = 5e-14
 Identities = 36/159 (22%), Positives = 66/159 (41%), Gaps = 18/159 (11%)

Query: 15  IDRLEIFKIHGR--DKQGRKILRIIGKFFPARLLSVEVLKRYL---SERVYPRLGKKAFT 69
           ++ L+ +   GR  DK GR +L      F  + +++E L RYL    E++     +K   
Sbjct: 2   LELLKAYIPGGRGYDKDGRPVLIERAGRFDLKSVTLEELLRYLVYVLEKILQE--EKKTG 59

Query: 70  VLYVHTGVQRSENF----AGISALRSIYDAIPANVKENLQAVYFVHPGLQARLFLATFGR 125
            +   T +   +        +S LR I   +  +  E L  VY ++P    R  L    +
Sbjct: 60  GIEGFTVIFDLKGLSMSNPDLSVLRKILKILQDHYPERLGKVYIINPPWFFR-VLWKIIK 118

Query: 126 LFFNGVGGLYGKLRYVNRLD--YLWEHVRRHEVEIPEFV 162
            F +       K+R+V       L E++ +   ++PE +
Sbjct: 119 PFLD--EKTREKIRFVGNDSKEELLEYIDKE--QLPEEL 153

cerevisiae phosphatidylinositol transfer protein (Sec14p). Domain in homologues of a S. cerevisiae phosphatidylinositol transfer protein (Sec14p) and in RhoGAPs, RhoGEFs and the RasGAP, neurofibromin (NF1). Lipid-binding domain. The SEC14 domain of Dbl is known to associate with G protein beta/gamma subunits. Length = 158

>gnl|CDD|238099 cd00170, SEC14, Sec14p-like lipid-binding domain

 Score = 52.4 bits (126), Expect = 8e-09
 Identities = 34/158 (21%), Positives = 65/158 (41%), Gaps = 15/158 (9%)

Query: 12  EELIDRLEIFKIHG-RDKQGRKILRII-GKFFPARLLSVEVLKRYLS---ERVYPRLGKK 66
            E +  L      G RDK+GR +L I  G    ++ L  E L RYL    E++     ++
Sbjct: 1   LEELKELGKVGYLGGRDKEGRPVLIIRAGNKDLSKSLDSEELLRYLVYTLEKLLQEDDEQ 60

Query: 67  AFTVLYVH--TGVQRSENFAGISALRSIYDAIPANVKENLQAVYFVHPGLQARLFLATF- 123
               + +    G+  S      S L+ I   +  N  E L+AVY ++P      F   + 
Sbjct: 61  VEGFVVIIDLKGLSLSHLLPDPSLLKKILKILQDNYPERLKAVYIINPP---WFFKVLWK 117

Query: 124 -GRLFFNGVGGLYGKLRYV-NRLDYLWEHVRRHEVEIP 159
             + F +       K+ ++ +  + L +++ + ++   
Sbjct: 118 IVKPFLSEK--TRKKIVFLGSDKEELLKYIDKEQLPEE 153

Found in secretory proteins, such as S. cerevisiae phosphatidylinositol transfer protein (Sec14p), and in lipid regulated proteins such as RhoGAPs, RhoGEFs and neurofibromin (NF1). SEC14 domain of Dbl is known to associate with G protein beta/gamma subunits. Length = 157

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	206
KOG4406	467	consensus CDC42 Rho GTPase-activating protein [Sig	100.0
PF13716	149	CRAL_TRIO_2: Divergent CRAL/TRIO domain; PDB: 2D4Q	100.0
smart00516	158	SEC14 Domain in homologues of a S. cerevisiae phos	99.83
cd00170	157	SEC14 Sec14p-like lipid-binding domain. Found in s	99.8
KOG1470	324	consensus Phosphatidylinositol transfer protein PD	99.73
PF00650	159	CRAL_TRIO: CRAL/TRIO domain; InterPro: IPR001251 T	99.63
KOG1471	317	consensus Phosphatidylinositol transfer protein SE	99.1
KOG1826	2724	consensus Ras GTPase activating protein RasGAP/neu	97.18
KOG2633	200	consensus Hismacro and SEC14 domain-containing pro	96.58

>KOG4406 consensus CDC42 Rho GTPase-activating protein [Signal transduction mechanisms; Cytoskeleton]

Probab=100.00  E-value=3.6e-35  Score=260.49  Aligned_cols=177  Identities=27%  Similarity=0.426  Sum_probs=163.7

Q ss_pred             ChhhHHHHHHhc--CcEEEecc--CCCCCeEEEEEeecCCC-CCCCHHHHHHHHHHHhhcccCCCCeEEEEEcCCcccCc
Q 028657            7 SESEQEELIDRL--EIFKIHGR--DKQGRKILRIIGKFFPA-RLLSVEVLKRYLSERVYPRLGKKAFTVLYVHTGVQRSE   81 (206)
Q Consensus         7 s~~e~~~~i~~~--~i~y~~G~--D~~GrpVvvi~a~~~p~-~~~d~e~ll~y~l~~ll~~~~~~~y~lVy~~tg~~~~~   81 (206)
                      ++++.|.++.++  +++.+.|.  |++||+|+++.||++|. +++|.-+++.|+.++ .|++++++|++||||.|+ ++.
T Consensus        66 p~ed~fyd~~~H~~ei~qvi~~~~D~~gr~iivv~a~rlp~~~eld~~~li~~~v~~-id~~Ve~DYt~vYfh~gl-~s~  143 (467)
T KOG4406|consen   66 PKEDPFYDIARHEREILQVIGDAKDKQGRKIIVVYACRLPSSSELDDIRLISYLVYT-IDKYVENDYTLVYFHHGL-PSD  143 (467)
T ss_pred             cccccHHHHHHhhhheeeeccCcccccCCeeEEEEEecCCchhhhhhHHHHHHHHHH-HHHHHhccceeeehhcCC-ccc
Confidence            457889999998  89988866  99999999999999999 578888899999995 899999999999999999 599


Q ss_pred             CCCcHHHHHHHHHhcchhHHhccceEEEEcCChHHHHHHHHhccccccCcCcccCcEEEeCChhHHHhhcccccccCChh
Q 028657           82 NFAGISALRSIYDAIPANVKENLQAVYFVHPGLQARLFLATFGRLFFNGVGGLYGKLRYVNRLDYLWEHVRRHEVEIPEF  161 (206)
Q Consensus        82 n~p~~~~L~~~y~~L~~~~kknLk~lyiVHPt~~~k~~~~~~~~~fis~~~k~~~KI~yv~~l~eL~~~I~~~ql~iP~~  161 (206)
                      |+|+++|+.++|..++++++||||++|+|||+|++|.+|.+|+ ||+|  .||.+||+|+++++||.++|..++|.+|+.
T Consensus       144 nkp~l~~l~~aYke~Dr~~~KNlKalYvvHptwfikvi~n~~k-plIS--~KF~rKi~Y~n~lseL~~~l~l~rL~lP~~  220 (467)
T KOG4406|consen  144 NKPYLQLLFDAYKELDRNFKKNLKALYVVHPTWFIKVIWNLFK-PLIS--LKFTRKIIYFNSLSELFEALKLNRLKLPPE  220 (467)
T ss_pred             ccchHHHHHHHHHHHHHHHhhhhhheEEecHHHHHHHHHHHHh-hhcc--hhhhceeEEeehHHHHHHhhhhhhhcCChh
Confidence            9999999999999999999999999999999999999998885 8999  999999999999999999999999999999


Q ss_pred             HHhhhhhhccC------------------CCccCCccCCCccccC
Q 028657          162 VMDHDEDLEYR------------------PMMDYGLESDHRRVYG  188 (206)
Q Consensus       162 V~~~d~~l~~~------------------p~~~~g~~~~~~~~~~  188 (206)
                      |++||+.++..                  |.++||+.+++....+
T Consensus       221 v~~~D~~~~s~~~~~a~~p~~~~~pr~pl~t~qFgvpLqf~~~~~  265 (467)
T KOG4406|consen  221 VLKHDDKLLSKAKTPAPPPEKMTPPRPPLPTQQFGVPLQFIPEKN  265 (467)
T ss_pred             hhhhhhcccccccCCCCCcccCCCCCCCCchhhcCccHHHhcccC
Confidence            99999998763                  4899999999876443

>PF13716 CRAL_TRIO_2: Divergent CRAL/TRIO domain; PDB: 2D4Q_B 3PG7_B 2E2X_B 3P7Z_B 3PEG_A

Probab=100.00  E-value=1.3e-33  Score=222.27  Aligned_cols=145  Identities=30%  Similarity=0.463  Sum_probs=112.7

Q ss_pred             CcEEEeccCCCCCeEEEEEeecCCCCCCCHHHHHHHHHHHhhcccCCCCeEEEEEcCCcccCcCCCcHHHHHHHHHhcch
Q 028657           19 EIFKIHGRDKQGRKILRIIGKFFPARLLSVEVLKRYLSERVYPRLGKKAFTVLYVHTGVQRSENFAGISALRSIYDAIPA   98 (206)
Q Consensus        19 ~i~y~~G~D~~GrpVvvi~a~~~p~~~~d~e~ll~y~l~~ll~~~~~~~y~lVy~~tg~~~~~n~p~~~~L~~~y~~L~~   98 (206)
                      .+++.+|+|++||||++++++++ ....|+|+++.|++.++.+.+.+++|+||+++++.+ ..+.|+++|++++|+.+|+
T Consensus         2 ~~~~~gG~d~~g~pV~~~~~~~~-~~~~~~~~ll~yl~~~l~~~~~~~~f~vVid~~~~~-~~~~~~~~~l~~~~~~l~~   79 (149)
T PF13716_consen    2 IFFYPGGRDREGRPVVVFIASRL-PSSDDLERLLLYLLSTLSEEVVDKPFSVVIDHTGFS-RSSEPSLSWLKQLYKLLPR   79 (149)
T ss_dssp             SE-EEEEEBTTS-EEEEEEGGG--C-TTHHHHHHHHHHHHH-TTTTTS-EEEEEE-TT---GGG---HHHHHHTTTSS-H
T ss_pred             eEEEecccCCCcCEEEEEECCcC-cchhhHHHHHHHHHHhhhHHhcCCCEEEEEEcCCCc-cccCCchHHHHHHHHHHHH
Confidence            46788999999999999999999 434699999999999643788899999999999995 8899999999999999999


Q ss_pred             hHHhccceEEEEcCChHHHHHHHHhccccccCcCcc-cCcEEEeCChhHHHhhcccccc--cCChhHHhhhhh
Q 028657           99 NVKENLQAVYFVHPGLQARLFLATFGRLFFNGVGGL-YGKLRYVNRLDYLWEHVRRHEV--EIPEFVMDHDED  168 (206)
Q Consensus        99 ~~kknLk~lyiVHPt~~~k~~~~~~~~~fis~~~k~-~~KI~yv~~l~eL~~~I~~~ql--~iP~~V~~~d~~  168 (206)
                      .+++||+++||+||++++|.+++.+.+++.+  .++ ++||+|++++++|.++|+.+||  .|| .|++||++
T Consensus        80 ~~~~nl~~vyiv~p~~~~k~~~~~~~~~~~~--~~~~~~kv~~~~sl~~L~~~i~~~qL~~~lp-~~~~~d~~  149 (149)
T PF13716_consen   80 KYKKNLKKVYIVHPNWFLKKILATLLRPFVS--SKFWKKKVVYVSSLSELSKHIDPSQLPESLP-GVLQYDHE  149 (149)
T ss_dssp             HHHHTEEEEEEES--HHHHHHHHHTTTTGGG--GTT--TTEEEESSTCGGGGTSGGGG-------HHH-----
T ss_pred             HHhhceEEEEEECCCHHHHHHHHHHhccccc--ccccceEEEEECCHHHHHhhCCHHHhcccCC-CEEecCcC
Confidence            9999999999999999999999778889889  999 9999999999999999999999  999 99999975

>smart00516 SEC14 Domain in homologues of a S

Probab=99.83  E-value=4.5e-20  Score=144.84  Aligned_cols=128  Identities=27%  Similarity=0.443  Sum_probs=111.9

Q ss_pred             ccCCCCCeEEEEEeecCCCCCCCHHHHHHHHHHHhhcc--------cCCCCeEEEEEcCCcccCcCCCcHHHHHHHHHhc
Q 028657           25 GRDKQGRKILRIIGKFFPARLLSVEVLKRYLSERVYPR--------LGKKAFTVLYVHTGVQRSENFAGISALRSIYDAI   96 (206)
Q Consensus        25 G~D~~GrpVvvi~a~~~p~~~~d~e~ll~y~l~~ll~~--------~~~~~y~lVy~~tg~~~~~n~p~~~~L~~~y~~L   96 (206)
                      |.|++||||+++.+++++.+..+.+.+++|+... ++.        ...+.+++|++.+|.+ ..+ ++.+|++++++.+
T Consensus        14 g~D~~GrpV~~~~~~~~~~~~~~~~~~~~~~~~~-~e~~~~~~~~~~~~~~~~~i~D~~~~~-~~~-~~~~~lk~~~~~~   90 (158)
T smart00516       14 GYDKDGRPVLIFRAGRFDLKSVTLEELLRYLVYV-LEKILQREKKTGGIEGFTVIFDLKGLS-MSN-PDLSVLRKILKIL   90 (158)
T ss_pred             CCCCCcCEEEEEeccccccCcCCHHHHHHHHHHH-HHHHHHHHhcCCCeeeEEEEEECCCCC-ccc-ccHHHHHHHHHHH
Confidence            6999999999999999988778999888887763 332        2335789999999985 544 8899999999999


Q ss_pred             chhHHhccceEEEEcCChHHHHHHHHhccccccCcCcccCcEEEeCC--hhHHHhhcccccccCCh
Q 028657           97 PANVKENLQAVYFVHPGLQARLFLATFGRLFFNGVGGLYGKLRYVNR--LDYLWEHVRRHEVEIPE  160 (206)
Q Consensus        97 ~~~~kknLk~lyiVHPt~~~k~~~~~~~~~fis~~~k~~~KI~yv~~--l~eL~~~I~~~ql~iP~  160 (206)
                      +..|++||+++|||||+++++++|+++ ++|++  +++++||+++++  .++|.++|+.++  ||.
T Consensus        91 ~~~yp~~l~~i~ivn~p~~~~~~~~~~-~~~l~--~~~~~ki~~~~~~~~~~L~~~i~~~~--lP~  151 (158)
T smart00516       91 QDHYPERLGKVLIINPPWFFRVLWKII-KPFLD--EKTREKIRFVGNDSKEELLEYIDPEQ--LPE  151 (158)
T ss_pred             HHHhHHHhCeEEEECCCHHHHHHHHHH-HhhcC--hhhhccEEEeCCCCHHHHHhhCCHhh--CcH
Confidence            999999999999999999999999877 58899  999999999998  899999999885  887

cerevisiae phosphatidylinositol transfer protein (Sec14p). Domain in homologues of a S. cerevisiae phosphatidylinositol transfer protein (Sec14p) and in RhoGAPs, RhoGEFs and the RasGAP, neurofibromin (NF1). Lipid-binding domain. The SEC14 domain of Dbl is known to associate with G protein beta/gamma subunits.

>cd00170 SEC14 Sec14p-like lipid-binding domain

Probab=99.80  E-value=3.7e-19  Score=137.52  Aligned_cols=135  Identities=24%  Similarity=0.372  Sum_probs=110.4

Q ss_pred             CcEEEeccCCCCCeEEEEEeecCCC-CCCCHHHHHHHHHHHhhcccC------CCCeEEEEEcCCcccCcCCC-cHHHHH
Q 028657           19 EIFKIHGRDKQGRKILRIIGKFFPA-RLLSVEVLKRYLSERVYPRLG------KKAFTVLYVHTGVQRSENFA-GISALR   90 (206)
Q Consensus        19 ~i~y~~G~D~~GrpVvvi~a~~~p~-~~~d~e~ll~y~l~~ll~~~~------~~~y~lVy~~tg~~~~~n~p-~~~~L~   90 (206)
                      ++.+.+|.|++||||+++..+.... ...+.+.++.+.... ++...      .+.+++|++.+|.+ ..+.. ..++++
T Consensus         9 ~~~~~~~~D~~gr~V~~~~~~~~~~~~~~~~~~~~~~~~~~-~e~~~~~~~~~~~~~~~i~D~~~~~-~~~~~~~~~~~k   86 (157)
T cd00170           9 KVGYLGGRDKEGRPVLIIRAGNKDLSKSLDSEELLRYLVYT-LEKLLQEDDEQVEGFVVIIDLKGLS-LSHLLPDPSLLK   86 (157)
T ss_pred             cccccCCCCCCcCEEEEEecCCcchhhcCCHHHHHHHHHHH-HHHHHhhhhhcccceEEEEECCCCC-hhccchhHHHHH
Confidence            5666667799999999999984333 445657777776653 44222      24789999999995 55543 789999


Q ss_pred             HHHHhcchhHHhccceEEEEcCChHHHHHHHHhccccccCcCcccCcEEEeCC-hhHHHhhcccccccCCh
Q 028657           91 SIYDAIPANVKENLQAVYFVHPGLQARLFLATFGRLFFNGVGGLYGKLRYVNR-LDYLWEHVRRHEVEIPE  160 (206)
Q Consensus        91 ~~y~~L~~~~kknLk~lyiVHPt~~~k~~~~~~~~~fis~~~k~~~KI~yv~~-l~eL~~~I~~~ql~iP~  160 (206)
                      ++++.++..|++||+++|||||+++++++|+++ ++|++  +++++||+++++ .++|.++|+.++  ||.
T Consensus        87 ~~~~~~~~~yp~~l~~v~ivn~p~~~~~~~~~~-~~~l~--~~~~~ki~~~~~~~~~L~~~i~~~~--Lp~  152 (157)
T cd00170          87 KILKILQDNYPERLKAVYIINPPWFFKVLWKIV-KPFLS--EKTRKKIVFLGSDKEELLKYIDKEQ--LPE  152 (157)
T ss_pred             HHHHHHHHhChHhhCeEEEECCCHhHHHHHHHH-HHhcC--HhhhhhEEEecCCHHHHHhhCChhh--CcH
Confidence            999999999999999999999999999999887 58899  999999999999 999999999986  665

Found in secretory proteins, such as S. cerevisiae phosphatidylinositol transfer protein (Sec14p), and in lipid regulated proteins such as RhoGAPs, RhoGEFs and neurofibromin (NF1). SEC14 domain of Dbl is known to associate with G protein beta/gamma subunits.

>KOG1470 consensus Phosphatidylinositol transfer protein PDR16 and related proteins [Lipid transport and metabolism]

Probab=99.73  E-value=3e-17  Score=143.91  Aligned_cols=145  Identities=19%  Similarity=0.239  Sum_probs=121.1

Q ss_pred             CChhhHHHHHHhcCcEEEeccCCCCCeEEEEEeecCCCCCCCHH---HHHHHHHHHhhc--ccCCCCeEEEEEcCCcccC
Q 028657            6 VSESEQEELIDRLEIFKIHGRDKQGRKILRIIGKFFPARLLSVE---VLKRYLSERVYP--RLGKKAFTVLYVHTGVQRS   80 (206)
Q Consensus         6 is~~e~~~~i~~~~i~y~~G~D~~GrpVvvi~a~~~p~~~~d~e---~ll~y~l~~ll~--~~~~~~y~lVy~~tg~~~~   80 (206)
                      +..+|...++ +.|..|.+|.|+.||||+++.++.-..+..+.+   +++.|++++...  .-+++.++++++.+|.+ .
T Consensus        86 ~~~~Ev~~e~-~tGK~yi~G~D~~gRPVl~~~~~~~~qn~~t~~~~~r~~Vy~mE~Ai~~lp~~qe~~~~L~D~~~fs-~  163 (324)
T KOG1470|consen   86 IEADEVAAEL-ETGKAYILGHDKDGRPVLYLRPRPHRQNTKTQKELERLLVYTLENAILFLPPGQEQFVWLFDLTGFS-M  163 (324)
T ss_pred             cCHHHHHHHh-hcCcEEEecccCCCCeEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHHhCCCCcceEEEEEecccCc-c
Confidence            5566666666 678888999999999999999986666545544   555555554322  23467799999999995 4


Q ss_pred             cCCCcHHHHHHHHHhcchhHHhccceEEEEcCChHHHHHHHHhccccccCcCcccCcEEEeCChhHHHhhcccccc
Q 028657           81 ENFAGISALRSIYDAIPANVKENLQAVYFVHPGLQARLFLATFGRLFFNGVGGLYGKLRYVNRLDYLWEHVRRHEV  156 (206)
Q Consensus        81 ~n~p~~~~L~~~y~~L~~~~kknLk~lyiVHPt~~~k~~~~~~~~~fis~~~k~~~KI~yv~~l~eL~~~I~~~ql  156 (206)
                       ..++++.++-+...|+.+|+++|+..+++||+|++..+|+.+ +||++  +++..||+|+.+..+|.++|+.+++
T Consensus       164 -sN~d~~~~k~~~~~lq~hYPErLg~a~l~~~P~iF~~~wkii-kpflD--p~t~~Kv~F~~~~~~l~~~~d~~~l  235 (324)
T KOG1470|consen  164 -SNPDIKFLKELLHILQDHYPERLGKALLVNAPWIFQPFWKII-KPFLD--PKTASKVKFVEPKDDLSEYFDESQL  235 (324)
T ss_pred             -cCCCcHHHHHHHHHHHHhChHHhhhhhhcCChHHHHHHHHHh-hhccC--hhhhceeEEecChhHHHhhCCcccc
Confidence             477999999999999999999999999999999999999887 69999  9999999999999999999999973

>PF00650 CRAL_TRIO: CRAL/TRIO domain; InterPro: IPR001251 This entry defines the C-terminal of various retinaldehyde/retinal-binding proteins that may be functional components of the visual cycle

Probab=99.63  E-value=5.7e-16  Score=121.56  Aligned_cols=141  Identities=23%  Similarity=0.310  Sum_probs=103.6

Q ss_pred             HHHhcCcEEEeccCCCCCeEEEEEeecCCCCCCCHHHHHHHHH---HHhhc---c-cCCCCeEEEEEcCCcccCcCCCc-
Q 028657           14 LIDRLEIFKIHGRDKQGRKILRIIGKFFPARLLSVEVLKRYLS---ERVYP---R-LGKKAFTVLYVHTGVQRSENFAG-   85 (206)
Q Consensus        14 ~i~~~~i~y~~G~D~~GrpVvvi~a~~~p~~~~d~e~ll~y~l---~~ll~---~-~~~~~y~lVy~~tg~~~~~n~p~-   85 (206)
                      ++.+.+..+..|.|++||||+++..+++.......+.+.+++.   +..+.   . ...+.+++|++.+|.+ ..+.+. 
T Consensus         2 ~~~~~~~~~~~g~D~~gr~v~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~iiD~~g~~-~~~~~~~   80 (159)
T PF00650_consen    2 EILKSGPFYLHGRDKDGRPVIYIRLGRFDPKKFSPEDVIRFFVYLLERMLKRMPEGGQVEGIVVIIDLSGFS-LSNFDWW   80 (159)
T ss_dssp             HHHTTSCEEEEEE-TTS-EEEEEEGTT--HHTS-HHHHHHHHHHHHHHHHHTHHHTSHHH-EEEEEE-TT---HHHHHCH
T ss_pred             HHHCCeeEEECCCCCCcCEEEEEEcccCCCCcCCHHHHHHHHHHHHHHHHhhhcccccceeEEEEEeCCCce-Eeccccc
Confidence            5778999999999999999999999887776555554444443   32221   1 2346789999999994 544442 


Q ss_pred             -HHHHHHHHHhcchhHHhccceEEEEcCChHHHHHHHHhccccccCcCcccCcEEEeCCh---hHHHhhcccccccCCh
Q 028657           86 -ISALRSIYDAIPANVKENLQAVYFVHPGLQARLFLATFGRLFFNGVGGLYGKLRYVNRL---DYLWEHVRRHEVEIPE  160 (206)
Q Consensus        86 -~~~L~~~y~~L~~~~kknLk~lyiVHPt~~~k~~~~~~~~~fis~~~k~~~KI~yv~~l---~eL~~~I~~~ql~iP~  160 (206)
                       .+.++.+.+.++..|+++++++||+|++++++++|+++. +|++  +++.+||+++.+-   ++|.++|+.++  ||.
T Consensus        81 ~~~~~k~~~~~~~~~yP~rl~~i~iin~p~~~~~~~~~~~-~~l~--~~~~~ki~~~~~~~~~~~l~~~i~~~~--lP~  154 (159)
T PF00650_consen   81 PISFLKKIIQLLQDHYPERLGKIYIINAPWFFRVLWKIVK-PFLS--PKTREKIVFHSGSDWKAKLKEYIDPEQ--LPV  154 (159)
T ss_dssp             HHHHHHHHHHHHHHHSTTTEEEEEEES--TTHHHHHHHHG-GGS---HHHHCTEEEECTTCHCHHHCCCSTGGG--SBG
T ss_pred             hhhhhhhhhhhhcccCCccceeEEEEecChhhhhhHhHHH-hhcC--HhhheeEEEECCcccHHHHHhhCCHhH--Cch
Confidence             888999999999999999999999999999999998884 8899  9999999999553   57999999885  776

Cellular retinaldehyde-binding protein (CRALBP) carries 11-cis-retinol or 11-cis-retinaldehyde as endogenous ligands and may function as a substrate carrier protein that modulates interaction of these retinoids with visual cycle enzymes []. The multidomain protein Trio binds the LAR transmembrane tyrosine phosphatase, contains a protein kinase domain, and has separate rac-specific and rho-specific guanine nucleotide exchange factor domains []. Trio is a multifunctional protein that integrates and amplifies signals involved in coordinating actin remodeling, which is necessary for cell migration and growth. Other members of the family are transfer proteins that include, guanine nucleotide exchange factor that may function as an effector of RAC1, phosphatidylinositol/phosphatidylcholine transfer protein that is required for the transport of secretory proteins from the golgi complex and alpha-tocopherol transfer protein that enhances the transfer of the ligand between separate membranes.; PDB: 1OIZ_A 1R5L_A 1OIP_A 3HX3_A 3HY5_A 1OLM_E 1O6U_E 3Q8G_A 3B7Q_B 3B7Z_A ....

>KOG1471 consensus Phosphatidylinositol transfer protein SEC14 and related proteins [Lipid transport and metabolism]

Probab=99.10  E-value=3.7e-10  Score=98.95  Aligned_cols=150  Identities=13%  Similarity=0.135  Sum_probs=109.5

Q ss_pred             HHHHhcCcEEEeccCCCCCeEEEEEeecCCCCC----CC-----------HHHHHHHHHHHhhcc--cCCCCeEEEEEcC
Q 028657           13 ELIDRLEIFKIHGRDKQGRKILRIIGKFFPARL----LS-----------VEVLKRYLSERVYPR--LGKKAFTVLYVHT   75 (206)
Q Consensus        13 ~~i~~~~i~y~~G~D~~GrpVvvi~a~~~p~~~----~d-----------~e~ll~y~l~~ll~~--~~~~~y~lVy~~t   75 (206)
                      +++.+..-....|.|++|+||++-.....-.+.    ..           .++....+.......  -..+..+.|++..
T Consensus        89 ~~~~~~~~~~~~~~~~~g~~v~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~e~~~~~~~~~~~g~~~I~Dl~  168 (317)
T KOG1471|consen   89 DELLKYYPQGLHGVDKEGRPVYIERLGKIDPKGLLKRTGSLDYLKYHFKEFEKVFKLVLELELKTGERQISGIVTIFDLK  168 (317)
T ss_pred             hhhhhhccccccccCCCCCEEEEeccCCCCcccceeeccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcceeEEEEECC
Confidence            344443334457999999999998776553321    11           223332222211111  2356689999999


Q ss_pred             CcccCcCC--CcHHHHHHHHHhcchhHHhccceEEEEcCChHHHHHHHHhccccccCcCcccCcEE--EeCChhHHHhhc
Q 028657           76 GVQRSENF--AGISALRSIYDAIPANVKENLQAVYFVHPGLQARLFLATFGRLFFNGVGGLYGKLR--YVNRLDYLWEHV  151 (206)
Q Consensus        76 g~~~~~n~--p~~~~L~~~y~~L~~~~kknLk~lyiVHPt~~~k~~~~~~~~~fis~~~k~~~KI~--yv~~l~eL~~~I  151 (206)
                      |++ ..+.  +..+.++++...++..|++++++++|||.++++.++|++++ ||++  +++++||+  .-++.++|.++|
T Consensus       169 G~~-~~~~~~~~~~~~~~~~~~~q~~yPe~l~~~~iIN~P~~f~~~~~~ik-pfL~--~kt~~ki~~~~~~~~~~L~k~i  244 (317)
T KOG1471|consen  169 GVS-LSHLLKPAPTLLKKILKILQDNYPERLKRIHIINAPTIFSALWKVVK-PFLD--EKTRKKIHVLHSKDKESLLKYI  244 (317)
T ss_pred             CCc-chhHHHHHHHHHHHHHHHHHHhCHHhhceEEEEcCchhHHHHHHHHh-ccCC--HHHHhhheecCCCchhhhhhhC
Confidence            995 5444  77899999999999999999999999999999999999885 8999  99999999  345789999999


Q ss_pred             ccccccCChhHHhhhhhhcc
Q 028657          152 RRHEVEIPEFVMDHDEDLEY  171 (206)
Q Consensus       152 ~~~ql~iP~~V~~~d~~l~~  171 (206)
                      +++.  ||.   +|......
T Consensus       245 ~~~~--LP~---~yGG~~~~  259 (317)
T KOG1471|consen  245 PPEV--LPE---EYGGTCGD  259 (317)
T ss_pred             CHhh--Ccc---ccCCCccc
Confidence            9985  777   66654443

>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]

Probab=97.18  E-value=0.0002  Score=74.32  Aligned_cols=161  Identities=16%  Similarity=-0.007  Sum_probs=129.1

Q ss_pred             CChhhHHHHHHhcCcEEEeccCCCCCeEEEEEeecCCCCCCCHHHHHHHHHHHhhcccCCCCeEEEEEcCCcccCcCCCc
Q 028657            6 VSESEQEELIDRLEIFKIHGRDKQGRKILRIIGKFFPARLLSVEVLKRYLSERVYPRLGKKAFTVLYVHTGVQRSENFAG   85 (206)
Q Consensus         6 is~~e~~~~i~~~~i~y~~G~D~~GrpVvvi~a~~~p~~~~d~e~ll~y~l~~ll~~~~~~~y~lVy~~tg~~~~~n~p~   85 (206)
                      +++.|++--+++.-++|+.| .+.|.|+.++++++.--++.+-+.++.+... ++.+.+.-++.++-+-+... .+++--
T Consensus      1549 lheKe~fitL~~~i~~~~~G-sen~~k~~~lvs~r~fl~~~s~~il~~l~~L-~~kp~~hf~~evreD~T~~~-~d~sfl 1625 (2724)
T KOG1826|consen 1549 LHEKEEFITLAKVIQFYANG-SENGLKNFYLVSRRKFLKECSDDILIFLVEL-CLKPKVHFPGEVREDPTPIE-FDYSFL 1625 (2724)
T ss_pred             HhhhhHHHHHHHHHHHHHhh-hhccCcchhhHhHHHHHhhcCcHHHHHHHHH-HcCccccCcceeeecCCcCC-ccHHHH
Confidence            67889999999999999999 9999999999997766655555555555555 36778889999998877664 345545


Q ss_pred             HHHHHH-HHHhcchhHHhccceEEEEcCChHHHHHHHHhccccccCcCcccCcEEEeCChhHHHhhcccccccCChhHHh
Q 028657           86 ISALRS-IYDAIPANVKENLQAVYFVHPGLQARLFLATFGRLFFNGVGGLYGKLRYVNRLDYLWEHVRRHEVEIPEFVMD  164 (206)
Q Consensus        86 ~~~L~~-~y~~L~~~~kknLk~lyiVHPt~~~k~~~~~~~~~fis~~~k~~~KI~yv~~l~eL~~~I~~~ql~iP~~V~~  164 (206)
                      -++++. ++...+.-..+|-.++|+++.+.|.|...+.-.|.+-.  -|--++..+.+..-.|.++|+.+|..+|...+-
T Consensus      1626 tsf~~~~~f~vr~~va~e~~~a~~di~~n~~lK~~~~l~driL~~--L~~~k~~~f~e~P~kl~e~id~~~q~~~~~t~~ 1703 (2724)
T KOG1826|consen 1626 TSFLYLKWFKVRPHVANENKHAVGDINCNSFLKETTKLHDRILGQ--LGQPKMEFFNEIPIKLREHIDDYPQLYEFMTRH 1703 (2724)
T ss_pred             HHHHhhhheeechhhhhhcccccccccchHHHHHHHHHHHHHHhh--cCCCceeehhcCCHHHHHHHhhhhhhhhHHHHH
Confidence            566665 88889999999999999999999999876554454423  666788999999999999999999999998888


Q ss_pred             hhhhhcc
Q 028657          165 HDEDLEY  171 (206)
Q Consensus       165 ~d~~l~~  171 (206)
                      -+++++-
T Consensus      1704 ~~edlkv 1710 (2724)
T KOG1826|consen 1704 AFEDLKV 1710 (2724)
T ss_pred             HHhhccc
Confidence            8887753

>KOG2633 consensus Hismacro and SEC14 domain-containing proteins [Chromatin structure and dynamics; Transcription]

Probab=96.58  E-value=1.2e-05  Score=66.67  Aligned_cols=180  Identities=26%  Similarity=0.297  Sum_probs=132.9

Q ss_pred             hHHHHHHhcCcEEEeccCCCCCeEEEEEeecCCCCCCCHHHHHHHHHHHhhcccCCCCeEEEEEcC---CcccCcCCCcH
Q 028657           10 EQEELIDRLEIFKIHGRDKQGRKILRIIGKFFPARLLSVEVLKRYLSERVYPRLGKKAFTVLYVHT---GVQRSENFAGI   86 (206)
Q Consensus        10 e~~~~i~~~~i~y~~G~D~~GrpVvvi~a~~~p~~~~d~e~ll~y~l~~ll~~~~~~~y~lVy~~t---g~~~~~n~p~~   86 (206)
                      ++++++....+|-..+.++.|.-+.-..+..++.+.+-+.....+.-......-.+.+..+.++|+   |.....+.+.+
T Consensus        14 ~~~~~~~~l~~f~~~~~~~~~i~lwr~d~~~l~v~avvl~~g~~~~~ai~~aagp~l~~e~~~~~~c~tG~ak~t~~~~L   93 (200)
T KOG2633|consen   14 EIFSNITSLEVFKIDKPDNGGISLWRGDGKTLEVDAVVLLGGKGVDEAIHRAAGPELPLECAYLHGCRTGAAKSTGGYGL   93 (200)
T ss_pred             hhhccccccchhhccCccccCeeEeecccccccceeeeeccCcchhHHHHHhcCCcchHHHHhhcCCCCCeeEecCCCCC
Confidence            456677788888888999999999999999998853322211111111011223445556666666   66555677788


Q ss_pred             HHHHHHHHhcchhHHhccceEEEEcCChHHHHHHHHhccccccCcCcccCcEEEeCChhHHHhhcccccccCC--hhHHh
Q 028657           87 SALRSIYDAIPANVKENLQAVYFVHPGLQARLFLATFGRLFFNGVGGLYGKLRYVNRLDYLWEHVRRHEVEIP--EFVMD  164 (206)
Q Consensus        87 ~~L~~~y~~L~~~~kknLk~lyiVHPt~~~k~~~~~~~~~fis~~~k~~~KI~yv~~l~eL~~~I~~~ql~iP--~~V~~  164 (206)
                      ...+-++...|+.+.+++...|.+|++......+++-  ..+|  +....||. .......++......++.|  .++..
T Consensus        94 pak~vIHtvgP~~~~d~~~~~~~L~~~~rs~L~la~~--~~ls--~iAf~~I~-sg~~gyP~e~aa~~~l~ti~~~f~~~  168 (200)
T KOG2633|consen   94 PAKRVIHTVGPRWKEDKLQECYFLHSCYRSCLDLAIE--KLLS--SIAFPKIS-SGRVGYPWEDAAKIELETIRVFFVKN  168 (200)
T ss_pred             ceeEEEEecCchhhccchHHHHHHHHHHHHHHHHHHH--hccc--eeeeeeee-ccccCccHHHHHHHHHHHHHHHHhhC
Confidence            8888889999999999999999999999888877554  3356  77778888 7777777777777777788  67777


Q ss_pred             hhhhhccCCCccCCccCCCccccCCCCCCC
Q 028657          165 HDEDLEYRPMMDYGLESDHRRVYGAPAVDS  194 (206)
Q Consensus       165 ~d~~l~~~p~~~~g~~~~~~~~~~~~~~~~  194 (206)
                      +|..|+..|+++|+.|..+..+..+...|.
T Consensus       169 ~d~~l~~~~f~~~d~e~~~~~l~~~~~~~~  198 (200)
T KOG2633|consen  169 KDSSLKTVPFLDYDSESYGAYLPEYAPSDA  198 (200)
T ss_pred             CCceEEEEEEeccCCchHHHHHhhhccccc
Confidence            887789999999999999999888777654

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	206
3peg_A	290	Neurofibromin; SEC14 domain, pleckstrin homology d	1e-36
3pg7_A	256	Neurofibromin; SEC lipid binding domain, PH domain	2e-32
1qzv_F	154	Plant photosystem I: subunit PSAF; photosynthesis,	8e-04

>3pg7_A Neurofibromin; SEC lipid binding domain, PH domain, lipid binding protein; HET: PTY; 2.19A {Homo sapiens} PDB: 2e2x_A* 3p7z_A* 2d4q_A* Length = 256

 Score =  116 bits (292), Expect = 2e-32
 Identities = 31/161 (19%), Positives = 61/161 (37%), Gaps = 4/161 (2%)

Query: 10  EQEELIDRLEIFKIHGRDKQGRKILRIIGKFFPARLLSVEVLKRYLSERVYPRLGKKAFT 69
           E+ + +  L IF   G  K G  I   + + F    ++ ++L  ++          K + 
Sbjct: 2   EEFKALKTLSIFYQAGTSKAGNPIFYYVARRFKTGQINGDLLIYHV-LLTLKPYYAKPYE 60

Query: 70  VLYVHTGVQRSENFAGISALRSIYDAIPANVKENLQAVYFVHPGLQARLFLATFGRLFFN 129
           ++   T    S  F     L   +   P    +N+ AVY  +     R +     RL   
Sbjct: 61  IVVDLTHTGPSNRF-KTDFLSKWFVVFPGFAYDNVSAVYIYNCNSWVREYTKYHERLLTG 119

Query: 130 GVGGLYGKLRYVNRLDYLWEHVRRHEVEIPEFVMDHDEDLE 170
                  +L +++    L EH+   + ++P   +  +EDL+
Sbjct: 120 --LKGSKRLVFIDCPGKLAEHIEHEQQKLPAATLALEEDLK 158

>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154

 Score = 37.6 bits (86), Expect = 8e-04
 Identities = 9/22 (40%), Positives = 14/22 (63%), Gaps = 5/22 (22%)

Query: 179 LESDHRRVYGAPAVDS-PALSI 199
           L++   ++Y A   DS PAL+I
Sbjct: 25  LQAS-LKLY-AD--DSAPALAI 42

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	206
3pg7_A	256	Neurofibromin; SEC lipid binding domain, PH domain	100.0
3peg_A	290	Neurofibromin; SEC14 domain, pleckstrin homology d	99.97
3hx3_A	316	Retinaldehyde-binding protein 1; lipid transfer pr	99.72
1r5l_A	262	Alpha-TTP, protein (alpha-tocopherol transfer prot	99.72
1aua_A	296	Phosphatidylinositol transfer protein SEC14P; phos	99.65
3q8g_A	320	CRAL-TRIO domain-containing protein YKL091C; strin	99.63
1olm_A	403	SEC14-like protein 2; lipid-binding protein, chole	99.61

>3pg7_A Neurofibromin; SEC lipid binding domain, PH domain, lipid binding protein; HET: PTY; 2.19A {Homo sapiens} PDB: 2e2x_A* 3p7z_A* 2d4q_A*

Probab=100.00  E-value=1.9e-40  Score=283.27  Aligned_cols=158  Identities=19%  Similarity=0.236  Sum_probs=151.0

Q ss_pred             hhHHHHHHhcCcEEEeccCCCCCeEEEEEeecCCCCCCCHHHHHHHHHHHhhcccCCCCeEEEEEcCCcccCcCCCcHHH
Q 028657            9 SEQEELIDRLEIFKIHGRDKQGRKILRIIGKFFPARLLSVEVLKRYLSERVYPRLGKKAFTVLYVHTGVQRSENFAGISA   88 (206)
Q Consensus         9 ~e~~~~i~~~~i~y~~G~D~~GrpVvvi~a~~~p~~~~d~e~ll~y~l~~ll~~~~~~~y~lVy~~tg~~~~~n~p~~~~   88 (206)
                      .|++++|+++++||++|.|++||||+|+++|++|...+|+|.|++|++++ ++++++++|++||+|||++ ..|.|+++|
T Consensus         1 ~ed~~~i~~~~ify~~G~d~dGrpViv~~~~~l~~~~~D~e~Ll~~vl~t-l~~~~~~~y~lV~d~T~~~-~~n~p~~~w   78 (256)
T 3pg7_A            1 KEEFKALKTLSIFYQAGTSKAGNPIFYYVARRFKTGQINGDLLIYHVLLT-LKPYYAKPYEIVVDLTHTG-PSNRFKTDF   78 (256)
T ss_dssp             CTTTTTHHHHTSEEEEEECTTSCEEEEEEGGGCCBTTBCHHHHHHHHHHH-HTTTTTSCEEEEEECTTCC-GGGCCCHHH
T ss_pred             CcchhHHHHcCCEEEcCcCCCCCEEEEEEeecCCCCCCCHHHHHHHHHHH-HHHhcCCCeEEEEECCCCC-cccCCcHHH
Confidence            47899999999999999999999999999999999889999999999985 8999999999999999995 889999999


Q ss_pred             HHHHHHhcchhHHhccceEEEEcCChHHHHHHHHhccccccCcCcccCcEEEeCChhHHHhhcccccccCChhHHhhhhh
Q 028657           89 LRSIYDAIPANVKENLQAVYFVHPGLQARLFLATFGRLFFNGVGGLYGKLRYVNRLDYLWEHVRRHEVEIPEFVMDHDED  168 (206)
Q Consensus        89 L~~~y~~L~~~~kknLk~lyiVHPt~~~k~~~~~~~~~fis~~~k~~~KI~yv~~l~eL~~~I~~~ql~iP~~V~~~d~~  168 (206)
                      |+++|+++|++++|||+++||||||+|+|.+++.+.++|.+  .++++|++|+++++||.++|+++||.||+++.++|++
T Consensus        79 l~~~~~llp~~~~kNlk~~Yivnpt~~~k~~~~~~~~~~~~--~k~~~Ki~fv~sl~eL~~~i~~~~L~LP~~t~~~~~d  156 (256)
T 3pg7_A           79 LSKWFVVFPGFAYDNVSAVYIYNCNSWVREYTKYHERLLTG--LKGSKRLVFIDCPGKLAEHIEHEQQKLPAATLALEED  156 (256)
T ss_dssp             HHHTTTSSCHHHHHTEEEEEEESCCHHHHHHHHHTHHHHTT--TTTCTTEEEESSTTGGGGTSCGGGCCCCHHHHHTTSS
T ss_pred             HHHHHHHcCHHHHhcccEEEEECCCHHHHHHHHHHhccccc--cccCCcEEEECCHHHHHhhcCHHHcCCChHHHhhccc
Confidence            99999999999999999999999999999887777788888  9999999999999999999999999999999999998


Q ss_pred             hc
Q 028657          169 LE  170 (206)
Q Consensus       169 l~  170 (206)
                      ++
T Consensus       157 ~r  158 (256)
T 3pg7_A          157 LK  158 (256)
T ss_dssp             CE
T ss_pred             ce
Confidence            76

>3hx3_A Retinaldehyde-binding protein 1; lipid transfer protein, 11-CIS-retinal, bothnia dystrophy, acetylation, cytoplasm, disease mutation; HET: RET; 1.69A {Homo sapiens} PDB: 3hy5_A*

Probab=99.72  E-value=3.2e-17  Score=143.01  Aligned_cols=146  Identities=14%  Similarity=0.207  Sum_probs=118.1

Q ss_pred             HHHhcCc-EEEeccCCCCCeEEEEEeecCCCCCCCHHHHHHHHHHHhhcccCC------CCeEEEEEcCCcccCcCC--C
Q 028657           14 LIDRLEI-FKIHGRDKQGRKILRIIGKFFPARLLSVEVLKRYLSERVYPRLGK------KAFTVLYVHTGVQRSENF--A   84 (206)
Q Consensus        14 ~i~~~~i-~y~~G~D~~GrpVvvi~a~~~p~~~~d~e~ll~y~l~~ll~~~~~------~~y~lVy~~tg~~~~~n~--p   84 (206)
                      ++-+.|+ .+..|.|++||||+++.++++..+..+.+.+++++... ++....      +.+++|++.+|++ ..+.  .
T Consensus       137 ~~l~~g~~~~l~g~Dk~GrpVii~r~g~~d~~~~~~~~~~r~~~~~-lE~~l~~~~~~v~g~v~IiD~~g~s-l~~~~~~  214 (316)
T 3hx3_A          137 CTIEAGYPGVLSSRDKYGRVVMLFNIENWQSQEITFDEILQAYCFI-LEKLLENEETQINGFCIIENFKGFT-MQQAASL  214 (316)
T ss_dssp             HHHHTTSSEECSSCCTTSCEEEEEECTTCCTTTSCHHHHHHHHHHH-HHHHTTSHHHHHHCEEEEEECTTCC-HHHHHHC
T ss_pred             HHHHcCCccccCCCCCCCCEEEEEecccCCCCCCCHHHHHHHHHHH-HHHHHhcccCCcceEEEEEECCCCC-HHHhccC
Confidence            3335666 45569999999999999988877667888777776653 443332      4699999999995 5443  4


Q ss_pred             cHHHHHHHHHhcchhHHhccceEEEEcCChHHHHHHHHhccccccCcCcccCcEEEe-CChhHHHhhcccccccCChhHH
Q 028657           85 GISALRSIYDAIPANVKENLQAVYFVHPGLQARLFLATFGRLFFNGVGGLYGKLRYV-NRLDYLWEHVRRHEVEIPEFVM  163 (206)
Q Consensus        85 ~~~~L~~~y~~L~~~~kknLk~lyiVHPt~~~k~~~~~~~~~fis~~~k~~~KI~yv-~~l~eL~~~I~~~ql~iP~~V~  163 (206)
                      +.++++++...++..|+.+|+++||||+++++.++|+++ ++|++  +++++||++. +++++|.++|+.++  ||.   
T Consensus       215 ~~~~~k~~~~~lq~~YPerL~~i~iiN~P~~f~~i~~iv-kpfl~--~kt~~KI~~~~~~~~~L~~~I~~~~--LP~---  286 (316)
T 3hx3_A          215 RTSDLRKMVDMLQDSFPAWFKAIHFIHQPWYFTTTYNVV-KPFLK--SKLLERVFVHGDDLSGFYQEIDENI--LPS---  286 (316)
T ss_dssp             CHHHHHHHHHHHHTTSTTTEEEEEEESCCTTHHHHHHHH-GGGCC--HHHHTTEEEEETCCHHHHHHSCGGG--SBG---
T ss_pred             ChHHHHHHHHHHHHhhhhhhceEEEEeCCHHHHHHHHHH-HHhCC--HHhhhheEEeCCCHHHHHhhCCHhh--CcH---
Confidence            567899999999999999999999999999999999888 58999  9999999998 46899999999986  776   


Q ss_pred             hhhhhh
Q 028657          164 DHDEDL  169 (206)
Q Consensus       164 ~~d~~l  169 (206)
                      +|+.+.
T Consensus       287 eyGG~~  292 (316)
T 3hx3_A          287 DFGGTL  292 (316)
T ss_dssp             GGTSSB
T ss_pred             hhCCCC
Confidence            555443

>1r5l_A Alpha-TTP, protein (alpha-tocopherol transfer protein); ataxia with vitamin E deficiency, transport protein; HET: MSE VIV; 1.50A {Homo sapiens} SCOP: a.5.3.1 c.13.1.1 PDB: 1oiz_A* 1oip_A*

Probab=99.72  E-value=3.3e-17  Score=137.89  Aligned_cols=136  Identities=10%  Similarity=0.147  Sum_probs=111.0

Q ss_pred             hcCcE-EEeccCCCCCeEEEEEeecCCCCCCCHHHHHHHHHHHhhcccCC------CCeEEEEEcCCcccCcCC--CcHH
Q 028657           17 RLEIF-KIHGRDKQGRKILRIIGKFFPARLLSVEVLKRYLSERVYPRLGK------KAFTVLYVHTGVQRSENF--AGIS   87 (206)
Q Consensus        17 ~~~i~-y~~G~D~~GrpVvvi~a~~~p~~~~d~e~ll~y~l~~ll~~~~~------~~y~lVy~~tg~~~~~n~--p~~~   87 (206)
                      +.|.. +..|.|++||||+++.++++..+..+.+.++++.... ++....      +.+++|++.+|.+ ..+.  +..+
T Consensus        81 ~~g~~~~l~g~D~~GrpV~i~~~~~~d~~~~~~~~~~r~~~~~-~E~~~~~~~~~~~g~~~I~D~~g~s-~~~~~~~~~~  158 (262)
T 1r5l_A           81 KAGYHGVLRSRDPTGSKVLIYRIAHWDPKVFTAYDVFRVSLIT-SELIVQEVETQRNGIKAIFDLEGWQ-FSHAFQITPS  158 (262)
T ss_dssp             HTTCEEECSSCCTTCCEEEEEEGGGCCTTTSCHHHHHHHHHHH-HHHHTTSHHHHHHCEEEEEECTTCC-HHHHHHCCHH
T ss_pred             HcCCccCCCCcCCCCCEEEEEeccccCcccCCHHHHHHHHHHH-HHHHHhChhhcccceEEEEECCCCC-HHHHhccCHH
Confidence            55654 4569999999999999988877667777666665542 332222      4589999999995 5553  4678


Q ss_pred             HHHHHHHhcchhHHhccceEEEEcCChHHHHHHHHhccccccCcCcccCcEEEeCC--hhHHHhhcccccccCCh
Q 028657           88 ALRSIYDAIPANVKENLQAVYFVHPGLQARLFLATFGRLFFNGVGGLYGKLRYVNR--LDYLWEHVRRHEVEIPE  160 (206)
Q Consensus        88 ~L~~~y~~L~~~~kknLk~lyiVHPt~~~k~~~~~~~~~fis~~~k~~~KI~yv~~--l~eL~~~I~~~ql~iP~  160 (206)
                      +++++...++..|+++|+++||||++++++++|+++ +||++  +++++||+++.+  .++|.++|+ ++  ||.
T Consensus       159 ~~k~~~~~~q~~yPerl~~i~ivN~P~~f~~~~~~v-kpfl~--~~t~~Ki~~~~~~~~~~L~~~i~-~~--LP~  227 (262)
T 1r5l_A          159 VAKKIAAVLTDSFPLKVRGIHLINEPVIFHAVFSMI-KPFLT--EKIKERIHMHGNNYKQSLLQHFP-DI--LPL  227 (262)
T ss_dssp             HHHHHHHHHHTSSSSCEEEEEEESCCGGGHHHHHHH-GGGSC--HHHHTTEEECCSSCHHHHHHHST-TT--SCG
T ss_pred             HHHHHHHHHHhhCChhhceEEEEeCCHHHHHHHHHH-HHhcC--HHHHhheEEeCCCcHHHHHHHhh-hh--CcH
Confidence            999999999999999999999999999999999888 58999  999999999965  689999998 85  676

>1aua_A Phosphatidylinositol transfer protein SEC14P; phospholipid-binding protein, peripheral golgi membrane protein, phospholipid exchange; HET: BOG; 2.50A {Saccharomyces cerevisiae} SCOP: a.5.3.1 c.13.1.1

Probab=99.65  E-value=2.2e-16  Score=135.67  Aligned_cols=147  Identities=15%  Similarity=0.129  Sum_probs=115.1

Q ss_pred             HHHhcCcEEEeccCCCCCeEEEEEeecCCCC----CCCHHHHHHHHHHHhhcc--------------cCCCCeEEEEEcC
Q 028657           14 LIDRLEIFKIHGRDKQGRKILRIIGKFFPAR----LLSVEVLKRYLSERVYPR--------------LGKKAFTVLYVHT   75 (206)
Q Consensus        14 ~i~~~~i~y~~G~D~~GrpVvvi~a~~~p~~----~~d~e~ll~y~l~~ll~~--------------~~~~~y~lVy~~t   75 (206)
                      .+.+....+..|.|++||||+++...++..+    ..+.++++++++.. ++.              ...+.+++|++.+
T Consensus        99 ~~~~~~~~~~~g~Dk~GrpV~i~~~g~~d~~~~~~~~~~~~~~~~~~~~-~E~~~~~~~~~~s~~~g~~v~~~~~I~D~~  177 (296)
T 1aua_A           99 LIAKFYPQYYHKTDKDGRPVYFEELGAVNLHEMNKVTSEERMLKNLVWE-YESVVQYRLPACSRAAGHLVETSCTIMDLK  177 (296)
T ss_dssp             HHGGGSCCEEEEECTTSCEEEEECGGGCCHHHHTTTCCHHHHHHHHHHH-HHHHHHTHHHHHHHHHTSCCCCEEEEEECT
T ss_pred             HHHHhCCceecccCCCCCEEEEEeeccCChHHhhccCCHHHHHHHHHHH-HHHHHHHHHHHHHHhcCCCceeEEEEEECC
Confidence            4444444456799999999999988776542    24667666655442 221              1245699999999


Q ss_pred             CcccCcCCCc-HHHHHHHHHhcchhHHhccceEEEEcCChHHHHHHHHhccccccCcCcccCcEEEeCC--hhHHHhhcc
Q 028657           76 GVQRSENFAG-ISALRSIYDAIPANVKENLQAVYFVHPGLQARLFLATFGRLFFNGVGGLYGKLRYVNR--LDYLWEHVR  152 (206)
Q Consensus        76 g~~~~~n~p~-~~~L~~~y~~L~~~~kknLk~lyiVHPt~~~k~~~~~~~~~fis~~~k~~~KI~yv~~--l~eL~~~I~  152 (206)
                      |++ ..+.+. .++++++...++..|+++|+++||||++++++++|+++ ++|++  +++.+||+++.+  .++|.++|+
T Consensus       178 g~s-~~~~~~~~~~~k~~~~~~q~~YPerl~~i~iiN~P~~f~~~~~ii-kpfl~--~~t~~KI~~~~~~~~~~L~~~i~  253 (296)
T 1aua_A          178 GIS-ISSAYSVMSYVREASYISQNYYPERMGKFYIINAPFGFSTAFRLF-KPFLD--PVTVSKIFILGSSYQKELLKQIP  253 (296)
T ss_dssp             TCC-HHHHHHHHHHHHHHHHHHHHHSTTCEEEEEEESCCHHHHHHHHHH-GGGSC--HHHHTTEEECCSCCHHHHTTTSC
T ss_pred             CCC-HHHHHHHHHHHHHHHHHHHHhHHHhhCeEEEECchHHHHHHHHHH-HhhcC--HhhcceEEEeCcccHHHHHhhCC
Confidence            995 555544 67889999999999999999999999999999999888 58999  999999999976  688999999


Q ss_pred             cccccCChhHHhhhhhhc
Q 028657          153 RHEVEIPEFVMDHDEDLE  170 (206)
Q Consensus       153 ~~ql~iP~~V~~~d~~l~  170 (206)
                      .++  ||.   +|+.+..
T Consensus       254 ~~~--LP~---~yGG~~~  266 (296)
T 1aua_A          254 AEN--LPV---KFGGKSE  266 (296)
T ss_dssp             SSS--SBG---GGTSCBC
T ss_pred             Hhh--CcH---HhCCCCC
Confidence            985  887   6776553

>3q8g_A CRAL-TRIO domain-containing protein YKL091C; string motif, signaling protein, directed evoluti SEC14, phospholipid transporter, lipid; HET: PEE; 1.80A {Saccharomyces cerevisiae} PDB: 3b7n_A* 3b74_A* 3b7q_A* 3b7z_A*

Probab=99.63  E-value=3.6e-16  Score=136.77  Aligned_cols=149  Identities=12%  Similarity=0.095  Sum_probs=116.1

Q ss_pred             HHHHhcCcEEEeccCCCCCeEEEEEeecCCCCC----CCHHHHHHHHHHH---hhc----------ccCCCCeEEEEEcC
Q 028657           13 ELIDRLEIFKIHGRDKQGRKILRIIGKFFPARL----LSVEVLKRYLSER---VYP----------RLGKKAFTVLYVHT   75 (206)
Q Consensus        13 ~~i~~~~i~y~~G~D~~GrpVvvi~a~~~p~~~----~d~e~ll~y~l~~---ll~----------~~~~~~y~lVy~~t   75 (206)
                      ..+.+....+..|.|++||||+++...++..+.    .+.++++.+++..   +++          ....+..++|++.+
T Consensus       113 ~~~~~~~~~~~~g~Dk~GRpV~i~r~g~~d~~~l~~~~~~~~~lr~lv~~~E~~~~~~l~~~s~~~G~~ve~~~~IiD~~  192 (320)
T 3q8g_A          113 IKLAKMYPQYYHHVDKDGRPLYFAELGGINLKKMYKITTEKQMLRNLVKEYELFATYRVPACSRRAGYLIETSCTVLDLK  192 (320)
T ss_dssp             HHHHTTSCEEEEEECTTCCEEEEEECTTCCHHHHHHHCCHHHHHHHHHHHHHHHHHTHHHHHHHHHTSCCCCEEEEEECT
T ss_pred             HHHHHhCCceecCCCCCcCEEEEEeccccCHHHhhccCCHHHHHHHHHHHHHHHHHHhhhHHHHhcCCCcceeEEEEECC
Confidence            356666677888999999999999988776532    2555555554331   111          11235678999999


Q ss_pred             CcccCcCCCc-HHHHHHHHHhcchhHHhccceEEEEcCChHHHHHHHHhccccccCcCcccCcEEEeCC--hhHHHhhcc
Q 028657           76 GVQRSENFAG-ISALRSIYDAIPANVKENLQAVYFVHPGLQARLFLATFGRLFFNGVGGLYGKLRYVNR--LDYLWEHVR  152 (206)
Q Consensus        76 g~~~~~n~p~-~~~L~~~y~~L~~~~kknLk~lyiVHPt~~~k~~~~~~~~~fis~~~k~~~KI~yv~~--l~eL~~~I~  152 (206)
                      |++ ..+.+. .++++++...++..|+++|+++||||++++++++|+++ ++|++  +++++||+++.+  .++|.++|+
T Consensus       193 g~s-l~~~~~~~~~~k~~~~~lq~~YPerl~~i~iiN~P~~f~~~~~~i-kpfl~--~~t~~KI~~~~~~~~~~L~~~i~  268 (320)
T 3q8g_A          193 GIS-LSNAYHVLSYIKDVADISQNYYPERMGKFYIIHSPFGFSTMFKMV-KPFLD--PVTVSKIFILGSSYKKELLKQIP  268 (320)
T ss_dssp             TCC-HHHHHHTHHHHHHHHHHHHHHSTTCEEEEEEESCCTTHHHHHTTT-GGGSC--HHHHHTEEECCTTHHHHHHHHSC
T ss_pred             CCC-HHHHHHHHHHHHHHHHHHHhhCchhhceEEEECCCHHHHHHHHHH-HHhCC--HHHhhhEEEeCCCcHHHHHhhCC
Confidence            985 555543 68899999999999999999999999999999999877 58999  999999999976  689999999


Q ss_pred             cccccCChhHHhhhhhhc
Q 028657          153 RHEVEIPEFVMDHDEDLE  170 (206)
Q Consensus       153 ~~ql~iP~~V~~~d~~l~  170 (206)
                      .++  ||.   +|+.+..
T Consensus       269 ~~~--LP~---~yGG~~~  281 (320)
T 3q8g_A          269 IEN--LPV---KYGGTSV  281 (320)
T ss_dssp             GGG--SBG---GGTSCBC
T ss_pred             hhh--CCh---hhCCCCC
Confidence            985  787   6765543

>1olm_A SEC14-like protein 2; lipid-binding protein, cholesterol biosynthesis, oxidized vitamin E, lipid-binding, transport, transcription regulation; HET: VTQ; 1.95A {Homo sapiens} SCOP: a.5.3.1 b.132.1.1 c.13.1.1 PDB: 1o6u_A* 1olm_E*

Probab=99.61  E-value=1.3e-15  Score=136.41  Aligned_cols=138  Identities=16%  Similarity=0.203  Sum_probs=112.8

Q ss_pred             EeccCCCCCeEEEEEeecCCCC----CCCHHHHHHHHHHHhhccc-------------CCCCeEEEEEcCCcccCcCC--
Q 028657           23 IHGRDKQGRKILRIIGKFFPAR----LLSVEVLKRYLSERVYPRL-------------GKKAFTVLYVHTGVQRSENF--   83 (206)
Q Consensus        23 ~~G~D~~GrpVvvi~a~~~p~~----~~d~e~ll~y~l~~ll~~~-------------~~~~y~lVy~~tg~~~~~n~--   83 (206)
                      ..|.|++||||+++..+++..+    ..+.+.++++++.. ++..             ..+.+++|++.+|++ ..+.  
T Consensus        88 ~~g~Dk~GrpV~~~~~g~~d~~~l~~~~~~~~~~r~~~~~-~E~~~~~~~~~s~~~g~~v~~~~~I~D~~g~s-l~~~~~  165 (403)
T 1olm_A           88 MCGYDLDGCPVWYDIIGPLDAKGLLFSASKQDLLRTKMRE-CELLLQECAHQTTKLGRKVETITIIYDCEGLG-LKHLWK  165 (403)
T ss_dssp             EEEECTTSCEEEEEECTTCCHHHHHTTSCHHHHHHHHHHH-HHHHHHHHHHHHHHHTSCCCCEEEEEECTTCC-GGGGCH
T ss_pred             eeccCCCcCEEEEEecCCCChHHhhccCCHHHHHHHHHHH-HHHHHHHHHhhHHhhCCcccceEEEEECCCCC-HHHHhh
Confidence            4699999999999998877653    35777777766552 3211             236799999999985 5554  


Q ss_pred             CcHHHHHHHHHhcchhHHhccceEEEEcCChHHHHHHHHhccccccCcCcccCcEEEeCC--hhHHHhhcccccccCChh
Q 028657           84 AGISALRSIYDAIPANVKENLQAVYFVHPGLQARLFLATFGRLFFNGVGGLYGKLRYVNR--LDYLWEHVRRHEVEIPEF  161 (206)
Q Consensus        84 p~~~~L~~~y~~L~~~~kknLk~lyiVHPt~~~k~~~~~~~~~fis~~~k~~~KI~yv~~--l~eL~~~I~~~ql~iP~~  161 (206)
                      |..++++++...++..|+++|+++||+|++++++++|+++ +||++  +++++||+++.+  .++|.++|+.++  ||. 
T Consensus       166 ~~~~~~k~~~~~lq~~YPerl~~i~iiN~P~~f~~i~~~i-kpfl~--~~t~~KI~~~~~~~~~~L~~~I~~~~--LP~-  239 (403)
T 1olm_A          166 PAVEAYGEFLCMFEENYPETLKRLFVVKAPKLFPVAYNLI-KPFLS--EDTRKKIMVLGANWKEVLLKHISPDQ--VPV-  239 (403)
T ss_dssp             HHHHHHHHHHHHHHHHSTTCEEEEEEESCCTTHHHHHHHH-GGGSC--HHHHHTEEECCTTHHHHHTTTSCGGG--SBG-
T ss_pred             HHHHHHHHHHHHHHhhCcHhhCeEEEEeCCHHHHHHHHHH-HhhcC--HhhhceEEEEChhHHHHHHhhcChhh--Cch-
Confidence            4688999999999999999999999999999999999888 58999  999999999975  578999999985  787 


Q ss_pred             HHhhhhhhc
Q 028657          162 VMDHDEDLE  170 (206)
Q Consensus       162 V~~~d~~l~  170 (206)
                        +|+.+..
T Consensus       240 --~yGG~~~  246 (403)
T 1olm_A          240 --EYGGTMT  246 (403)
T ss_dssp             --GGTSSBC
T ss_pred             --hhCCCcC
Confidence              6776554

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	206
d1auaa2	203	C-terminal domain of phosphatidylinositol transfer	99.66
d1r5la2	185	Alpha-tocopherol transfer protein {Human (Homo sap	99.64
d1olma3	199	Supernatant protein factor (SPF), middle domain {H	99.63

>d1auaa2 c.13.1.1 (A:97-299) C-terminal domain of phosphatidylinositol transfer protein sec14p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: SpoIIaa-like
superfamily: CRAL/TRIO domain
family: CRAL/TRIO domain
domain: C-terminal domain of phosphatidylinositol transfer protein sec14p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.66  E-value=4.5e-17  Score=130.95  Aligned_cols=140  Identities=14%  Similarity=0.096  Sum_probs=110.3

Q ss_pred             EEEeccCCCCCeEEEEEeecCCCC----CCCHHHHHHHHHHHhhcc--------------cCCCCeEEEEEcCCcccCcC
Q 028657           21 FKIHGRDKQGRKILRIIGKFFPAR----LLSVEVLKRYLSERVYPR--------------LGKKAFTVLYVHTGVQRSEN   82 (206)
Q Consensus        21 ~y~~G~D~~GrpVvvi~a~~~p~~----~~d~e~ll~y~l~~ll~~--------------~~~~~y~lVy~~tg~~~~~n   82 (206)
                      .+..|+|++||||+++...++..+    ..+.+.++.+.... ++.              ...+.+++|++.+|++ ..+
T Consensus        13 ~~~~G~Dk~GrpV~~~r~g~~~~~~l~~~~~~~~~~~~~~~~-~E~~~~~~~~~~~~~~~~~v~~~i~IiD~~g~s-~~~   90 (203)
T d1auaa2          13 QYYHKTDKDGRPVYFEELGAVNLHEMNKVTSEERMLKNLVWE-YESVVQYRLPACSRAAGHLVETSCTIMDLKGIS-ISS   90 (203)
T ss_dssp             CEEEEECTTSCEEEEECGGGCCHHHHTTTCCHHHHHHHHHHH-HHHHHHTHHHHHHHHHTSCCCCEEEEEECTTCC-HHH
T ss_pred             CcCCCCCCCCCEEEEEECCCCChHHhcccCCHHHHHHHHHHH-HHHHHHHHHHHhhhhccCccceEEEEEECCCCC-hHH
Confidence            345799999999999988877653    34666666655442 221              1125689999999885 444


Q ss_pred             CC-cHHHHHHHHHhcchhHHhccceEEEEcCChHHHHHHHHhccccccCcCcccCcEEEeC--ChhHHHhhcccccccCC
Q 028657           83 FA-GISALRSIYDAIPANVKENLQAVYFVHPGLQARLFLATFGRLFFNGVGGLYGKLRYVN--RLDYLWEHVRRHEVEIP  159 (206)
Q Consensus        83 ~p-~~~~L~~~y~~L~~~~kknLk~lyiVHPt~~~k~~~~~~~~~fis~~~k~~~KI~yv~--~l~eL~~~I~~~ql~iP  159 (206)
                      .. .+..++++.+.++..|+++|+++||+|++++++++|++++ +|++  +++.+||+++.  ..++|.++|+.++  ||
T Consensus        91 ~~~~~~~~k~~~~~~q~~yPe~l~~i~ivN~P~~~~~~~~~vk-~fl~--~~t~~KI~~~~~~~~~~L~~~id~~~--LP  165 (203)
T d1auaa2          91 AYSVMSYVREASYISQNYYPERMGKFYIINAPFGFSTAFRLFK-PFLD--PVTVSKIFILGSSYQKELLKQIPAEN--LP  165 (203)
T ss_dssp             HHHHHHHHHHHHHHHHHHSTTCEEEEEEESCCHHHHHHHHHHG-GGSC--HHHHTTEEECCSCCHHHHTTTSCSSS--SB
T ss_pred             hhhHHHHHHHHHHHHHHhChHhhcceEEECCcHHHHHHHHHHH-hhcC--HHHhhceeecCCCCHHHHHhhCCHhh--Ch
Confidence            42 3577899999999999999999999999999999999884 8899  99999999995  4899999999985  88


Q ss_pred             hhHHhhhhhhc
Q 028657          160 EFVMDHDEDLE  170 (206)
Q Consensus       160 ~~V~~~d~~l~  170 (206)
                      .   +|..+.+
T Consensus       166 ~---~~GG~~~  173 (203)
T d1auaa2         166 V---KFGGKSE  173 (203)
T ss_dssp             G---GGTSCBC
T ss_pred             H---HhCCCCc
Confidence            7   6765543

>d1r5la2 c.13.1.1 (A:91-275) Alpha-tocopherol transfer protein {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: SpoIIaa-like
superfamily: CRAL/TRIO domain
family: CRAL/TRIO domain
domain: Alpha-tocopherol transfer protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.64  E-value=5e-16  Score=123.12  Aligned_cols=138  Identities=9%  Similarity=0.118  Sum_probs=110.3

Q ss_pred             hcCcEEEe-ccCCCCCeEEEEEeecCCCCCCCHHHHHHHHHHH---hhc--ccCCCCeEEEEEcCCcccCcC--CCcHHH
Q 028657           17 RLEIFKIH-GRDKQGRKILRIIGKFFPARLLSVEVLKRYLSER---VYP--RLGKKAFTVLYVHTGVQRSEN--FAGISA   88 (206)
Q Consensus        17 ~~~i~y~~-G~D~~GrpVvvi~a~~~p~~~~d~e~ll~y~l~~---ll~--~~~~~~y~lVy~~tg~~~~~n--~p~~~~   88 (206)
                      +.|.+... |+|++||||+++.++++..+..+.+.++++....   ++.  ....+.+++|++.+|.+ ..+  .++.+.
T Consensus         7 ~~g~~~~lp~rD~~Gr~v~~~r~~~~d~~~~~~~~~~r~~~~~~e~~~~~~~~~~~g~~~I~D~~g~s-~~~~~~~~~~~   85 (185)
T d1r5la2           7 KAGYHGVLRSRDPTGSKVLIYRIAHWDPKVFTAYDVFRVSLITSELIVQEVETQRNGIKAIFDLEGWQ-FSHAFQITPSV   85 (185)
T ss_dssp             HTTCEEECSSCCTTCCEEEEEEGGGCCTTTSCHHHHHHHHHHHHHHHTTSHHHHHHCEEEEEECTTCC-HHHHHHCCHHH
T ss_pred             HcCCceecCCCCcCcCEEEEEEcccCCCCCCCHHHHHHHHHHHHHHHHhccccCCceEEEEEECCCCC-HHHhhhccHHH
Confidence            56777654 8999999999999998877666766555544432   221  12234589999999985 544  378999


Q ss_pred             HHHHHHhcchhHHhccceEEEEcCChHHHHHHHHhccccccCcCcccCcEEEe-CChhHHHhhcccccccCCh
Q 028657           89 LRSIYDAIPANVKENLQAVYFVHPGLQARLFLATFGRLFFNGVGGLYGKLRYV-NRLDYLWEHVRRHEVEIPE  160 (206)
Q Consensus        89 L~~~y~~L~~~~kknLk~lyiVHPt~~~k~~~~~~~~~fis~~~k~~~KI~yv-~~l~eL~~~I~~~ql~iP~  160 (206)
                      ++++.+.++..|+.+|++++||||+++++++|+++ ++|++  +++++||+++ ++.+++...+++++  ||.
T Consensus        86 ~~~~~~~~q~~yP~rl~~i~ivn~P~~~~~~~~~v-k~fl~--~k~~~Ki~~~~~~~~~~~~~~~~~~--LP~  153 (185)
T d1r5la2          86 AKKIAAVLTDSFPLKVRGIHLINEPVIFHAVFSMI-KPFLT--EKIKERIHMHGNNYKQSLLQHFPDI--LPL  153 (185)
T ss_dssp             HHHHHHHHHTSSSSCEEEEEEESCCGGGHHHHHHH-GGGSC--HHHHTTEEECCSSCHHHHHHHSTTT--SCG
T ss_pred             HHHHHHHHHhhCchhhheeEEEcCCHHHHHHHHHH-HHhcc--HHHHhheEEeccchHHHHhhcCHHh--CCH
Confidence            99999999999999999999999999999999888 58999  9999999998 45778888888875  665

>d1olma3 c.13.1.1 (A:76-274) Supernatant protein factor (SPF), middle domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: SpoIIaa-like
superfamily: CRAL/TRIO domain
family: CRAL/TRIO domain
domain: Supernatant protein factor (SPF), middle domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=2.9e-16  Score=126.23  Aligned_cols=137  Identities=16%  Similarity=0.198  Sum_probs=108.6

Q ss_pred             eccCCCCCeEEEEEeecCCCC----CCCHHHHHHHHHHHhhcc-----------c--CCCCeEEEEEcCCcccCcCC--C
Q 028657           24 HGRDKQGRKILRIIGKFFPAR----LLSVEVLKRYLSERVYPR-----------L--GKKAFTVLYVHTGVQRSENF--A   84 (206)
Q Consensus        24 ~G~D~~GrpVvvi~a~~~p~~----~~d~e~ll~y~l~~ll~~-----------~--~~~~y~lVy~~tg~~~~~n~--p   84 (206)
                      .|.|++||||+++...++..+    ....+.++++.+.. ++.           .  .-+.+++|++.+|++ ..+.  +
T Consensus        14 ~G~Dk~Grpv~~~r~g~~d~~~l~~~~~~~~~~~~~~~~-~E~~~~~~~~~~~~~~~~v~~~~~I~Dl~g~s-~~~~~~~   91 (199)
T d1olma3          14 CGYDLDGCPVWYDIIGPLDAKGLLFSASKQDLLRTKMRE-CELLLQECAHQTTKLGRKVETITIIYDCEGLG-LKHLWKP   91 (199)
T ss_dssp             EEECTTSCEEEEEECTTCCHHHHHTTSCHHHHHHHHHHH-HHHHHHHHHHHHHHHTSCCCCEEEEEECTTCC-GGGGCHH
T ss_pred             ccCCCCCCEEEEEecccCChHHhhccCCHHHHHHHHHHH-HHHHHHHHHHHHHhcCCccceEEEEEECCCCc-hhhhccc
Confidence            599999999999988777643    34566666654442 211           1  125789999999984 4444  3


Q ss_pred             cHHHHHHHHHhcchhHHhccceEEEEcCChHHHHHHHHhccccccCcCcccCcEEEeCC--hhHHHhhcccccccCChhH
Q 028657           85 GISALRSIYDAIPANVKENLQAVYFVHPGLQARLFLATFGRLFFNGVGGLYGKLRYVNR--LDYLWEHVRRHEVEIPEFV  162 (206)
Q Consensus        85 ~~~~L~~~y~~L~~~~kknLk~lyiVHPt~~~k~~~~~~~~~fis~~~k~~~KI~yv~~--l~eL~~~I~~~ql~iP~~V  162 (206)
                      .+++++++...++..|+++|+++||+|++++++++|+++ ++|++  +++++||+++++  .+.|.++|+.++  ||.  
T Consensus        92 ~~~~l~~~~~~~q~~YPerl~~i~iiN~P~~f~~~w~iv-k~fl~--~~t~~KI~~~~~~~~~~L~~~i~~~~--lP~--  164 (199)
T d1olma3          92 AVEAYGEFLCMFEENYPETLKRLFVVKAPKLFPVAYNLI-KPFLS--EDTRKKIMVLGANWKEVLLKHISPDQ--VPV--  164 (199)
T ss_dssp             HHHHHHHHHHHHHHHSTTCEEEEEEESCCTTHHHHHHHH-GGGSC--HHHHHTEEECCTTHHHHHTTTSCGGG--SBG--
T ss_pred             cHHHHHHHHHHHHHHHHHhhhheEEECCCHHHHHHHHHH-HHhcC--HHhhccEEEeCCCCHHHHHHhCCHhh--CCH--
Confidence            578999999999999999999999999999999999988 58999  999999999964  577999999985  887  


Q ss_pred             Hhhhhhhc
Q 028657          163 MDHDEDLE  170 (206)
Q Consensus       163 ~~~d~~l~  170 (206)
                       +|+.+..
T Consensus       165 -~yGGt~~  171 (199)
T d1olma3         165 -EYGGTMT  171 (199)
T ss_dssp             -GGTSSBC
T ss_pred             -HhCCCCC
Confidence             7766553