Citrus Sinensis ID: 028820

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200---
MMAPPIETSSKTPVSQPPAHPPLNERILSSMSRRSVAAHPWHDLEIGPGAPKIFNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDCILSTIYNGSICFICELPFLSLMQVEL
cccccccccccccccccccccccHHHHHHHccccccccccccccccccccccEEEEEEEEcccccccEEEEcccccEEEEEEccccccccccccccccccccccccccEEEEccccccccEEEEEEEEEEEEEEEccccccEEEEEEccccccccccccccccHHHHHHHHHHHHHcccccccccEEEEEEEEccEEEEEEcc
ccccccccccccccccccccccHHHHHHHcccccccccccccccccccccccEEEEEEEEcccccEEEEEEccccEEEEEEEcccccccccEEEEccccccccccccEEEEEcccccccccEEEEEEEEEEEEEEcccEEEEEEEEEcccHHHcccccHHHccHHHHHHHHHHHHHHHHHHHHcccEEEEEcccHHEEEEEcc
mmappietssktpvsqppahpplnerilssmsrrsvaahpwhdleigpgapkIFNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSvvyphnygfiprtlcedndpldvliimqepvlpgcfLRAKAiglmpmidqgekddkiiavcaddpeyrhyndikelpphRLAEIRRFFEDCILSTIYNgsicficelpflslMQVEL
mmappietssktpvsqppahPPLNERILSSMSRRSVAAHpwhdleigpgaPKIFNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDCILSTIYNGSICFICELPFLSLMQVEL
MMAPPIETSSKTPVSQPPAHPPLNERILSSMSRRSVAAHPWHDLEIGPGAPKIFNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDCILSTIYNGSICFICELPFLSLMQVEL
************************************AAHPWHDLEIGPGAPKIFNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDCILSTIYNGSICFICELPFLSLM****
********************************R*SVAAHPWHDLEIGPGAPKIFNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDCILSTIYNGSICFICELPFLSLMQVEL
*******************HPPLNERILSS********HPWHDLEIGPGAPKIFNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDCILSTIYNGSICFICELPFLSLMQVEL
********************PPLNERILSSMSRRSVAAHPWHDLEIGPGAPKIFNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDCILSTIYNGSICFICELPFLSLMQVEL
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MMAPPIETSSKTPVSQPPAHPPLNERILSSMSRRSVAAHPWHDLEIGPGAPKIFNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDCILSTIYNGSICFICELPFLSLMQVEL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query203 2.2.26 [Sep-21-2011]
O48556214 Soluble inorganic pyropho N/A no 0.837 0.794 0.811 2e-81
Q43187211 Soluble inorganic pyropho N/A no 0.768 0.739 0.891 2e-80
Q0DYB1214 Soluble inorganic pyropho no no 0.827 0.785 0.802 5e-78
A2X8Q3214 Soluble inorganic pyropho N/A no 0.827 0.785 0.802 5e-78
P21216218 Soluble inorganic pyropho no no 0.758 0.706 0.824 7e-75
O23979215 Soluble inorganic pyropho N/A no 0.802 0.758 0.771 7e-72
Q949J1192 Soluble inorganic pyropho N/A no 0.704 0.744 0.727 3e-59
Q8EZ21178 Inorganic pyrophosphatase yes no 0.684 0.780 0.561 3e-42
Q72MG4178 Inorganic pyrophosphatase yes no 0.684 0.780 0.561 3e-42
Q8U438178 Inorganic pyrophosphatase yes no 0.674 0.769 0.518 1e-35
>sp|O48556|IPYR_MAIZE Soluble inorganic pyrophosphatase OS=Zea mays GN=IPP PE=2 SV=1 Back     alignment and function desciption
 Score =  301 bits (771), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 138/170 (81%), Positives = 150/170 (88%)

Query: 7   ETSSKTPVSQPPAHPPLNERILSSMSRRSVAAHPWHDLEIGPGAPKIFNCVIEIGKGSKV 66
           E  +     QP   P LNERILSS+SRRSVAAHPWHDLEIGP AP +FN V+EI KGSKV
Sbjct: 4   EDKTAASAEQPKRAPKLNERILSSLSRRSVAAHPWHDLEIGPDAPAVFNVVVEITKGSKV 63

Query: 67  KYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAK 126
           KYELDKK+GLI VDRVLYSSVVYPHNYGF+PRTLCEDNDP+DVL++MQEPV+PG FLRA+
Sbjct: 64  KYELDKKTGLIKVDRVLYSSVVYPHNYGFVPRTLCEDNDPMDVLVLMQEPVVPGSFLRAR 123

Query: 127 AIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFED 176
           AIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDI EL PHRL EI+RFFED
Sbjct: 124 AIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDISELSPHRLQEIKRFFED 173

Zea mays (taxid: 4577)
EC: 3EC: .EC: 6EC: .EC: 1EC: .EC: 1
>sp|Q43187|IPYR_SOLTU Soluble inorganic pyrophosphatase OS=Solanum tuberosum GN=PPA PE=2 SV=1 Back     alignment and function description
>sp|Q0DYB1|IPYR_ORYSJ Soluble inorganic pyrophosphatase OS=Oryza sativa subsp. japonica GN=IPP PE=2 SV=1 Back     alignment and function description
>sp|A2X8Q3|IPYR_ORYSI Soluble inorganic pyrophosphatase OS=Oryza sativa subsp. indica GN=IPP PE=2 SV=1 Back     alignment and function description
>sp|P21216|IPYR2_ARATH Soluble inorganic pyrophosphatase 2 OS=Arabidopsis thaliana GN=PPA2 PE=2 SV=2 Back     alignment and function description
>sp|O23979|IPYR_HORVD Soluble inorganic pyrophosphatase OS=Hordeum vulgare var. distichum GN=IPP PE=2 SV=1 Back     alignment and function description
>sp|Q949J1|IPYR2_CHLRE Soluble inorganic pyrophosphatase 2 OS=Chlamydomonas reinhardtii GN=ppa2 PE=1 SV=1 Back     alignment and function description
>sp|Q8EZ21|IPYR_LEPIN Inorganic pyrophosphatase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar Lai (strain 56601) GN=ppa PE=3 SV=1 Back     alignment and function description
>sp|Q72MG4|IPYR_LEPIC Inorganic pyrophosphatase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni (strain Fiocruz L1-130) GN=ppa PE=3 SV=1 Back     alignment and function description
>sp|Q8U438|IPYR_PYRFU Inorganic pyrophosphatase OS=Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=ppa PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query203
118483169216 unknown [Populus trichocarpa] 0.862 0.810 0.914 5e-90
224090639216 predicted protein [Populus trichocarpa] 0.862 0.810 0.914 5e-90
255581034222 inorganic pyrophosphatase, putative [Ric 0.862 0.788 0.897 9e-89
225439878216 PREDICTED: soluble inorganic pyrophospha 0.862 0.810 0.891 2e-88
357440503252 Soluble inorganic pyrophosphatase [Medic 0.862 0.694 0.88 4e-88
388518385216 unknown [Lotus japonicus] 0.862 0.810 0.885 9e-88
47775656216 putative inorganic pyrophosphatase [Arac 0.862 0.810 0.874 1e-87
357440501224 Soluble inorganic pyrophosphatase [Medic 0.862 0.781 0.88 2e-87
269130673216 inorganic pyrophosphatase protein [Medic 0.862 0.810 0.88 3e-87
388522381216 unknown [Lotus japonicus] 0.862 0.810 0.88 7e-87
>gi|118483169|gb|ABK93489.1| unknown [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  335 bits (860), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 160/175 (91%), Positives = 167/175 (95%)

Query: 2   MAPPIETSSKTPVSQPPAHPPLNERILSSMSRRSVAAHPWHDLEIGPGAPKIFNCVIEIG 61
           MAPPIET SK P+S+  +HPPLNERILSSM+RRSVAAHPWHDLEIGP APKIFNCV+EIG
Sbjct: 1   MAPPIETPSKLPISRHSSHPPLNERILSSMNRRSVAAHPWHDLEIGPEAPKIFNCVVEIG 60

Query: 62  KGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGC 121
           KG KVKYELDKK+GLI VDRVLYSSVVYPHNYGFIPRTLCEDNDP+DVLIIMQEPVL GC
Sbjct: 61  KGGKVKYELDKKNGLIKVDRVLYSSVVYPHNYGFIPRTLCEDNDPMDVLIIMQEPVLSGC 120

Query: 122 FLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFED 176
           FLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFED
Sbjct: 121 FLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFED 175

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224090639|ref|XP_002309043.1| predicted protein [Populus trichocarpa] gi|222855019|gb|EEE92566.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255581034|ref|XP_002531333.1| inorganic pyrophosphatase, putative [Ricinus communis] gi|223529055|gb|EEF31040.1| inorganic pyrophosphatase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|225439878|ref|XP_002278867.1| PREDICTED: soluble inorganic pyrophosphatase [Vitis vinifera] gi|297741552|emb|CBI32684.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|357440503|ref|XP_003590529.1| Soluble inorganic pyrophosphatase [Medicago truncatula] gi|355479577|gb|AES60780.1| Soluble inorganic pyrophosphatase [Medicago truncatula] Back     alignment and taxonomy information
>gi|388518385|gb|AFK47254.1| unknown [Lotus japonicus] Back     alignment and taxonomy information
>gi|47775656|emb|CAG30522.1| putative inorganic pyrophosphatase [Arachis hypogaea] gi|48927683|gb|AAT47553.1| putative inorganic pyrophosphatase [Arachis hypogaea] Back     alignment and taxonomy information
>gi|357440501|ref|XP_003590528.1| Soluble inorganic pyrophosphatase [Medicago truncatula] gi|355479576|gb|AES60779.1| Soluble inorganic pyrophosphatase [Medicago truncatula] Back     alignment and taxonomy information
>gi|269130673|gb|ACZ27843.1| inorganic pyrophosphatase protein [Medicago truncatula] gi|388503010|gb|AFK39571.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|388522381|gb|AFK49252.1| unknown [Lotus japonicus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query203
TAIR|locus:2084066216 PPa4 "pyrophosphorylase 4" [Ar 0.862 0.810 0.857 1.1e-80
TAIR|locus:2200965212 PPa1 "pyrophosphorylase 1" [Ar 0.788 0.754 0.881 1.5e-76
TAIR|locus:2116997216 PPa5 "pyrophosphorylase 5" [Ar 0.862 0.810 0.801 1.2e-74
TAIR|locus:2041424216 PPa3 "pyrophosphorylase 3" [Ar 0.798 0.75 0.846 1.4e-73
TAIR|locus:2062195218 PPa2 "pyrophosphorylase 2" [Ar 0.798 0.743 0.786 1.1e-69
UNIPROTKB|Q949J1192 ppa2 "Soluble inorganic pyroph 0.704 0.744 0.727 7.5e-57
TIGR_CMR|DET_0367211 DET_0367 "inorganic pyrophosph 0.600 0.578 0.467 5.7e-27
UNIPROTKB|P65746162 ppa "Inorganic pyrophosphatase 0.596 0.746 0.429 1.1e-25
TIGR_CMR|CJE_0741172 CJE_0741 "inorganic pyrophosph 0.640 0.755 0.437 2.6e-24
TIGR_CMR|CBU_0628175 CBU_0628 "inorganic pyrophosph 0.600 0.697 0.432 1.3e-22
TAIR|locus:2084066 PPa4 "pyrophosphorylase 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 810 (290.2 bits), Expect = 1.1e-80, P = 1.1e-80
 Identities = 150/175 (85%), Positives = 162/175 (92%)

Query:     2 MAPPIETSSKTPVSQPPAHPPLNERILSSMSRRSVAAHPWHDLEIGPGAPKIFNCVIEIG 61
             MAPPIE S+K+ V +  + P LNERILSSMS RSVAAHPWHDLEIGP AP IFNCV+EIG
Sbjct:     1 MAPPIEVSTKSYVEKHVSLPTLNERILSSMSHRSVAAHPWHDLEIGPEAPIIFNCVVEIG 60

Query:    62 KGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGC 121
             KGSKVKYELDK +GLI VDR+LYSSVVYPHNYGFIPRTLCED+DP+DVL+IMQEPV+PGC
Sbjct:    61 KGSKVKYELDKTTGLIKVDRILYSSVVYPHNYGFIPRTLCEDSDPIDVLVIMQEPVIPGC 120

Query:   122 FLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFED 176
             FLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDI ELPPHR+AEIRRFFED
Sbjct:   121 FLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDISELPPHRMAEIRRFFED 175
GO:0000287 "magnesium ion binding" evidence=IEA
GO:0004427 "inorganic diphosphatase activity" evidence=IEA;IDA
GO:0005737 "cytoplasm" evidence=ISM;IEA
GO:0006796 "phosphate-containing compound metabolic process" evidence=IEA
GO:0008152 "metabolic process" evidence=ISS
GO:0016020 "membrane" evidence=ISS
GO:0046686 "response to cadmium ion" evidence=IEP
GO:0005829 "cytosol" evidence=IDA
TAIR|locus:2200965 PPa1 "pyrophosphorylase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2116997 PPa5 "pyrophosphorylase 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2041424 PPa3 "pyrophosphorylase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2062195 PPa2 "pyrophosphorylase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q949J1 ppa2 "Soluble inorganic pyrophosphatase 2" [Chlamydomonas reinhardtii (taxid:3055)] Back     alignment and assigned GO terms
TIGR_CMR|DET_0367 DET_0367 "inorganic pyrophosphatase" [Dehalococcoides ethenogenes 195 (taxid:243164)] Back     alignment and assigned GO terms
UNIPROTKB|P65746 ppa "Inorganic pyrophosphatase" [Mycobacterium tuberculosis (taxid:1773)] Back     alignment and assigned GO terms
TIGR_CMR|CJE_0741 CJE_0741 "inorganic pyrophosphatase" [Campylobacter jejuni RM1221 (taxid:195099)] Back     alignment and assigned GO terms
TIGR_CMR|CBU_0628 CBU_0628 "inorganic pyrophosphatase" [Coxiella burnetii RSA 493 (taxid:227377)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q8DHR2IPYR_THEEB3, ., 6, ., 1, ., 10.50740.65020.7674yesno
Q8EZ21IPYR_LEPIN3, ., 6, ., 1, ., 10.56110.68470.7808yesno
Q72MG4IPYR_LEPIC3, ., 6, ., 1, ., 10.56110.68470.7808yesno
O26363IPYR_METTH3, ., 6, ., 1, ., 10.50370.66500.7670yesno
Q8U438IPYR_PYRFU3, ., 6, ., 1, ., 10.51820.67480.7696yesno
Q43187IPYR_SOLTU3, ., 6, ., 1, ., 10.89100.76840.7393N/Ano
O48556IPYR_MAIZE3, ., 6, ., 1, ., 10.81170.83740.7943N/Ano
Q9UY24IPYR_PYRAB3, ., 6, ., 1, ., 10.50360.67480.7696yesno
Q949J1IPYR2_CHLRE3, ., 6, ., 1, ., 10.72720.70440.7447N/Ano
Q8TVE2IPYR_METKA3, ., 6, ., 1, ., 10.50740.66000.7613yesno
O23979IPYR_HORVD3, ., 6, ., 1, ., 10.77100.80290.7581N/Ano
Q8EVW9IPYR_MYCPE3, ., 6, ., 1, ., 10.51630.60090.6740yesno
A2X8Q3IPYR_ORYSI3, ., 6, ., 1, ., 10.80230.82750.7850N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.6.1.10.991
3rd Layer3.6.10.976

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
grail3.0023015401
SubName- Full=Putative uncharacterized protein; (216 aa)
(Populus trichocarpa)
Predicted Functional Partners:
estExt_Genewise1_v1.C_LG_VIII0332
hypothetical protein (623 aa)
     •• 0.909
estExt_Genewise1_v1.C_LG_X3071
SubName- Full=Putative uncharacterized protein; (624 aa)
     •• 0.909
estExt_fgenesh4_pg.C_LG_IX0294
SubName- Full=Putative uncharacterized protein; (489 aa)
     •• 0.902
estExt_fgenesh4_pm.C_LG_IV0548
SubName- Full=Putative uncharacterized protein; (488 aa)
     •• 0.902
gw1.6399.6.1
annotation not avaliable (279 aa)
     •• 0.900
PtrAtpB_1
RecName- Full=ATP synthase subunit beta; EC=3.6.3.14;; Produces ATP from ADP in the presence of [...] (560 aa)
     •• 0.900
estExt_Genewise1_v1.C_LG_VIII1306
hypothetical protein; Produces ATP from ADP in the presence of a proton gradient across the mem [...] (560 aa)
     •• 0.900
gw1.XVIII.1630.1
SubName- Full=Putative uncharacterized protein; (165 aa)
     •  0.899
gw1.XV.1202.1
autoinhibited H+ ATPase (967 aa)
     •  0.899
gw1.XII.988.1
autoinhibited H+ ATPase (966 aa)
     •  0.899

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query203
PLN02373188 PLN02373, PLN02373, soluble inorganic pyrophosphat 1e-122
cd00412155 cd00412, pyrophosphatase, Inorganic pyrophosphatas 8e-78
pfam00719156 pfam00719, Pyrophosphatase, Inorganic pyrophosphat 1e-72
COG0221171 COG0221, Ppa, Inorganic pyrophosphatase [Energy pr 7e-62
PRK02230184 PRK02230, PRK02230, inorganic pyrophosphatase; Pro 3e-51
PRK01250176 PRK01250, PRK01250, inorganic pyrophosphatase; Pro 9e-49
PRK00642205 PRK00642, PRK00642, inorganic pyrophosphatase; Pro 1e-40
PLN02707267 PLN02707, PLN02707, Soluble inorganic pyrophosphat 9e-21
>gnl|CDD|178001 PLN02373, PLN02373, soluble inorganic pyrophosphatase Back     alignment and domain information 
 Score =  344 bits (884), Expect = e-122
 Identities = 138/147 (93%), Positives = 143/147 (97%)

Query: 30  SMSRRSVAAHPWHDLEIGPGAPKIFNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVY 89
           SMSRRSVAAHPWHDLEIGPGAP IFNCV+EI KGSKVKYELDKK+GLI VDRVLYSSVVY
Sbjct: 1   SMSRRSVAAHPWHDLEIGPGAPAIFNCVVEITKGSKVKYELDKKTGLIKVDRVLYSSVVY 60

Query: 90  PHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCAD 149
           PHNYGFIPRTLCEDNDPLDVL++MQEPVLPGCFLRA+AIGLMPMIDQGEKDDKIIAVCAD
Sbjct: 61  PHNYGFIPRTLCEDNDPLDVLVLMQEPVLPGCFLRARAIGLMPMIDQGEKDDKIIAVCAD 120

Query: 150 DPEYRHYNDIKELPPHRLAEIRRFFED 176
           DPEYRHY DIKELPPHRLAEIRRFFED
Sbjct: 121 DPEYRHYTDIKELPPHRLAEIRRFFED 147

Length = 188
>gnl|CDD|238239 cd00412, pyrophosphatase, Inorganic pyrophosphatase Back     alignment and domain information
>gnl|CDD|189686 pfam00719, Pyrophosphatase, Inorganic pyrophosphatase Back     alignment and domain information
>gnl|CDD|223299 COG0221, Ppa, Inorganic pyrophosphatase [Energy production and conversion] Back     alignment and domain information
>gnl|CDD|179388 PRK02230, PRK02230, inorganic pyrophosphatase; Provisional Back     alignment and domain information
>gnl|CDD|179262 PRK01250, PRK01250, inorganic pyrophosphatase; Provisional Back     alignment and domain information
>gnl|CDD|179080 PRK00642, PRK00642, inorganic pyrophosphatase; Provisional Back     alignment and domain information
>gnl|CDD|178309 PLN02707, PLN02707, Soluble inorganic pyrophosphatase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 203
PLN02373188 soluble inorganic pyrophosphatase 100.0
PRK00642205 inorganic pyrophosphatase; Provisional 100.0
PLN02707267 Soluble inorganic pyrophosphatase 100.0
PRK01250176 inorganic pyrophosphatase; Provisional 100.0
cd00412155 pyrophosphatase Inorganic pyrophosphatase. These e 100.0
PRK02230184 inorganic pyrophosphatase; Provisional 100.0
PF00719156 Pyrophosphatase: Inorganic pyrophosphatase; InterP 100.0
KOG1626279 consensus Inorganic pyrophosphatase/Nucleosome rem 100.0
COG0221171 Ppa Inorganic pyrophosphatase [Energy production a 100.0
KOG1626279 consensus Inorganic pyrophosphatase/Nucleosome rem 94.49
>PLN02373 soluble inorganic pyrophosphatase Back     alignment and domain information 
Probab=100.00  E-value=8.7e-65  Score=428.16  Aligned_cols=155  Identities=89%  Similarity=1.457  Sum_probs=150.8

Q ss_pred             hcccCCcccCcCCCCCCCCCCCCeeEEEEEeCCCCCceEEEeccCCCeEeeeecccccccccccCcCccccCCCCCcccE
Q 028820           30 SMSRRSVAAHPWHDLEIGPGAPKIFNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDV  109 (203)
Q Consensus        30 ~~~~~~~~~spwHdipl~~~~~~~vn~VVEIPrgS~~KyEid~~~g~i~~Dr~l~~~~~yP~NYGfIPqT~~gDgDPLDv  109 (203)
                      ||+++..++|||||||++++.++.+|+||||||||++|||+|+++|.|++||++++++.||||||||||||++|||||||
T Consensus         1 ~~~~~~~~~~~whdi~~~~~~~~~v~vVIEIP~gs~~KyE~dk~~g~i~~Dr~l~~~~~yP~nYGfIP~T~~~DgDPLDv   80 (188)
T PLN02373          1 SMSRRSVAAHPWHDLEIGPGAPAIFNCVVEITKGSKVKYELDKKTGLIKVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDV   80 (188)
T ss_pred             CcccccccCCccccCCCCCCCCCEEEEEEEECCCCCeeEEEccCCCCEEEeeecccCCcCCcccccccccccCCCCccEE
Confidence            47788899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEeccccCCCceEEEEEEEeeEeeeeCCCCCcEEEEEeCCCccccCCCCCCCCChhhHHHHHHHHHHhhhccccC
Q 028820          110 LIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDCILSTIYN  184 (203)
Q Consensus       110 lvl~~~p~~~G~v~~vrviGvL~miD~gE~D~KIIaV~~~Dp~~~~i~di~Dv~~~~l~~I~~fFr~YK~l~~~~  184 (203)
                      |||++.|+.||++++||+||+|+|+|+||.|||||||+.+||+|++++|++||+++++++|+|||++||.++++.
T Consensus        81 lvl~~~~~~~G~vi~~R~iG~l~m~D~ge~D~KiIaV~~~dp~~~~i~dl~Dl~~~~l~~I~~fF~~YK~legK~  155 (188)
T PLN02373         81 LVLMQEPVLPGCFLRARAIGLMPMIDQGEKDDKIIAVCADDPEYRHYTDIKELPPHRLAEIRRFFEDYKKNENKE  155 (188)
T ss_pred             EEecCCCCCCceEEEEEEEEEEEEeeCCCCCCeEEEEECCCcccccCCChHHCCHHHHHHHHHHHHHhcccCCCe
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999554

>PRK00642 inorganic pyrophosphatase; Provisional Back     alignment and domain information
>PLN02707 Soluble inorganic pyrophosphatase Back     alignment and domain information
>PRK01250 inorganic pyrophosphatase; Provisional Back     alignment and domain information
>cd00412 pyrophosphatase Inorganic pyrophosphatase Back     alignment and domain information
>PRK02230 inorganic pyrophosphatase; Provisional Back     alignment and domain information
>PF00719 Pyrophosphatase: Inorganic pyrophosphatase; InterPro: IPR008162 Inorganic pyrophosphatase (3 Back     alignment and domain information
>KOG1626 consensus Inorganic pyrophosphatase/Nucleosome remodeling factor, subunit NURF38 [Energy production and conversion] Back     alignment and domain information
>COG0221 Ppa Inorganic pyrophosphatase [Energy production and conversion] Back     alignment and domain information
>KOG1626 consensus Inorganic pyrophosphatase/Nucleosome remodeling factor, subunit NURF38 [Energy production and conversion] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query203
1twl_A186 Inorganic Pyrophosphatase From Pyrococcus Furiosus 4e-37
1ude_A195 Crystal Structure Of The Inorganic Pyrophosphatase 2e-35
3i98_A178 X-Ray Crystallographic Structure Of Inorganic Pyrop 2e-34
3q46_A178 Magnesium Activated Inorganic Pyrophosphatase From 9e-34
3r6e_A178 The Structure Of Thermococcus Thioreducens' Inorgan 1e-31
1qez_A173 Sulfolobus Acidocaldarius Inorganic Pyrophosphatase 2e-28
3sw5_A180 Crystal Structure Of Inorganic Pyrophosphatase From 2e-28
2uxs_A169 2.7a Crystal Structure Of Inorganic Pyrophosphatase 4e-27
1sxv_A172 1.3a Crystal Structure Of Rv3628, Mycobacterium Tub 5e-27
1wcf_A171 1.54 A Crystal Structure Of Rv3628, Mycobacterium T 5e-27
4ecp_A167 X-Ray Crystal Structure Of Inorganic Pyrophosphate 7e-27
2bqx_A173 Inorganic Pyrophosphatase From The Pathogenic Bacte 2e-26
3fq3_A197 Crystal Structure Of Inorganic Phosphatase From Bru 4e-26
1ygz_A173 Crystal Structure Of Inorganic Pyrophosphatase From 5e-25
2prd_A174 Crystal Structure Of Inorganic Pyrophosphatase From 2e-24
3d63_A196 Crystal Structure Of Inorganic Pyrophosphatase From 2e-23
3ld3_A199 Crystal Structure Of Inorganic Phosphatase From Ana 2e-22
3lo0_A193 Crystal Structure Of Inorganic Pyrophosphatase From 2e-21
3d53_A173 2.2 A Crystal Structure Of Inorganic Pyrophosphatas 3e-21
2eip_A175 Inorganic Pyrophosphatase Length = 175 7e-21
1obw_A175 Structure Of Inorganic Pyrophosphatase Length = 175 1e-20
3tr4_A178 Structure Of An Inorganic Pyrophosphatase (Ppa) Fro 2e-20
1mjz_A175 Structure Of Inorganic Pyrophosphatase Mutant D97n 2e-20
1mjw_A175 Structure Of Inorganic Pyrophosphatase Mutant D42n 2e-20
1mjx_A175 Structure Of Inorganic Pyrophosphatase Mutant D65n 2e-20
1mjy_A175 Structure Of Inorganic Pyrophosphatase Mutant D70n 4e-20
2au7_A175 The R43q Active Site Variant Of E.Coli Inorganic Py 4e-20
3i4q_A176 Structure Of A Putative Inorganic Pyrophosphatase F 3e-17
1m38_A287 Structure Of Inorganic Pyrophosphatase Length = 287 2e-12
1huj_A281 Refined Structure Of Yeast Inorganic Pyrophosphatas 3e-12
1huk_A281 Refined Structure Of Yeast Inorganic Pyrophosphatas 3e-12
1wgi_A286 Structure Of Inorganic Pyrophosphatase Length = 286 3e-12
8prk_A287 The R78k And D117e Active Site Variants Of Saccharo 3e-12
2ik1_A286 Yeast Inorganic Pyrophosphatase Variant Y93f With M 7e-12
2ik0_A286 Yeast Inorganic Pyrophosphatase Variant E48d With M 7e-12
2ik7_A286 Yeast Inorganic Pyrophosphatase Variant D120n With 9e-12
117e_A286 The R78k And D117e Active Site Variants Of Saccharo 9e-12
2ik6_A286 Yeast Inorganic Pyrophosphatase Variant D120e With 9e-12
2ik9_A286 Yeast Inorganic Pyrophosphatase Variant D152e With 9e-12
2ik2_A286 Yeast Inorganic Pyrophosphatase Variant D115e With 9e-12
1ypp_A286 Acid Anhydride Hydrolase Length = 286 1e-11
1pyp_A285 X-Ray Diffraction Study Of Inorganic Pyrophosphatas 4e-11
>pdb|1TWL|A Chain A, Inorganic Pyrophosphatase From Pyrococcus Furiosus Pfu-264096-001 Length = 186 Back     alignment and structure 
Iteration: 1

 Score =  150 bits (379), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 71/139 (51%), Positives = 99/139 (71%)
Query: 37  AAHPWHDLEIGPGAPKIFNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFI 96
            ++P+HDLE GP  P++   +IEI KGS+ KYELDKK+GL+ +DRVLYS   YP +YG I
Sbjct: 8   GSNPFHDLEPGPDVPEVVYAIIEIPKGSRNKYELDKKTGLLKLDRVLYSPFFYPVDYGII 67
Query: 97  PRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHY 156
           PRT  ED+DP D+++IM+EPV P   + A+ IGL  MID G+KD K++AV  +DP ++ +
Sbjct: 68  PRTWYEDDDPFDIMVIMREPVYPLTIIEARPIGLFKMIDSGDKDYKVLAVPVEDPYFKDW 127
Query: 157 NDIKELPPHRLAEIRRFFE 175
            DI ++P   L EI  FF+
Sbjct: 128 KDIDDVPKAFLDEIAHFFK 146
>pdb|1UDE|A Chain A, Crystal Structure Of The Inorganic Pyrophosphatase From The Hyperthermophilic Archaeon Pyrococcus Horikoshii Ot3 Length = 195 Back     alignment and structure
>pdb|3I98|A Chain A, X-Ray Crystallographic Structure Of Inorganic Pyrophosphatase At 298k From Archaeon Thermococcus Thioreducens Length = 178 Back     alignment and structure
>pdb|3Q46|A Chain A, Magnesium Activated Inorganic Pyrophosphatase From Thermococcus Thioreducens Bound To Hydrolyzed Product At 0.99 Angstrom Resolution Length = 178 Back     alignment and structure
>pdb|3R6E|A Chain A, The Structure Of Thermococcus Thioreducens' Inorganic Pyrophosphatase Bound To Sulfate Length = 178 Back     alignment and structure
>pdb|1QEZ|A Chain A, Sulfolobus Acidocaldarius Inorganic Pyrophosphatase: An Archael Pyrophosphatase. Length = 173 Back     alignment and structure
>pdb|3SW5|A Chain A, Crystal Structure Of Inorganic Pyrophosphatase From Bartonella Henselae Length = 180 Back     alignment and structure
>pdb|2UXS|A Chain A, 2.7a Crystal Structure Of Inorganic Pyrophosphatase (rv3628) From Mycobacterium Tuberculosis At Ph 7.5 Length = 169 Back     alignment and structure
>pdb|1SXV|A Chain A, 1.3a Crystal Structure Of Rv3628, Mycobacterium Tuberculosis Inorganic Pyrophosphatase (Ppase) At Ph5.0 Length = 172 Back     alignment and structure
>pdb|1WCF|A Chain A, 1.54 A Crystal Structure Of Rv3628, Mycobacterium Tuberculosis Inorganic Pyrophosphatase (Ppase) At Ph7.0 Length = 171 Back     alignment and structure
>pdb|4ECP|A Chain A, X-Ray Crystal Structure Of Inorganic Pyrophosphate Ppa From Mycobacterium Leprae Length = 167 Back     alignment and structure
>pdb|2BQX|A Chain A, Inorganic Pyrophosphatase From The Pathogenic Bacterium Helicobacter Pylori-Kinetic And Structural Properties Length = 173 Back     alignment and structure
>pdb|3FQ3|A Chain A, Crystal Structure Of Inorganic Phosphatase From Brucella Melitensis Length = 197 Back     alignment and structure
>pdb|1YGZ|A Chain A, Crystal Structure Of Inorganic Pyrophosphatase From Helicobacter Pylori Length = 173 Back     alignment and structure
>pdb|2PRD|A Chain A, Crystal Structure Of Inorganic Pyrophosphatase From Thermus Thermophilus Length = 174 Back     alignment and structure
>pdb|3D63|A Chain A, Crystal Structure Of Inorganic Pyrophosphatase From Burkholderia Pseudomallei Length = 196 Back     alignment and structure
>pdb|3LD3|A Chain A, Crystal Structure Of Inorganic Phosphatase From Anaplasma Phagocytophilum At 1.75a Resolution Length = 199 Back     alignment and structure
>pdb|3LO0|A Chain A, Crystal Structure Of Inorganic Pyrophosphatase From Ehrlichia Chaffeensis Length = 193 Back     alignment and structure
>pdb|3D53|A Chain A, 2.2 A Crystal Structure Of Inorganic Pyrophosphatase From Rickettsia Prowazekii Length = 173 Back     alignment and structure
>pdb|2EIP|A Chain A, Inorganic Pyrophosphatase Length = 175 Back     alignment and structure
>pdb|1OBW|A Chain A, Structure Of Inorganic Pyrophosphatase Length = 175 Back     alignment and structure
>pdb|3TR4|A Chain A, Structure Of An Inorganic Pyrophosphatase (Ppa) From Coxiella Burnetii Length = 178 Back     alignment and structure
>pdb|1MJZ|A Chain A, Structure Of Inorganic Pyrophosphatase Mutant D97n Length = 175 Back     alignment and structure
>pdb|1MJW|A Chain A, Structure Of Inorganic Pyrophosphatase Mutant D42n Length = 175 Back     alignment and structure
>pdb|1MJX|A Chain A, Structure Of Inorganic Pyrophosphatase Mutant D65n Length = 175 Back     alignment and structure
>pdb|1MJY|A Chain A, Structure Of Inorganic Pyrophosphatase Mutant D70n Length = 175 Back     alignment and structure
>pdb|2AU7|A Chain A, The R43q Active Site Variant Of E.Coli Inorganic Pyrophosphatase Length = 175 Back     alignment and structure
>pdb|3I4Q|A Chain A, Structure Of A Putative Inorganic Pyrophosphatase From The Oil- Degrading Bacterium Oleispira Antarctica Length = 176 Back     alignment and structure
>pdb|1M38|A Chain A, Structure Of Inorganic Pyrophosphatase Length = 287 Back     alignment and structure
>pdb|1HUJ|A Chain A, Refined Structure Of Yeast Inorganic Pyrophosphatase And Its K61r Mutant Length = 281 Back     alignment and structure
>pdb|1HUK|A Chain A, Refined Structure Of Yeast Inorganic Pyrophosphatase And Its K61r Mutant Length = 281 Back     alignment and structure
>pdb|1WGI|A Chain A, Structure Of Inorganic Pyrophosphatase Length = 286 Back     alignment and structure
>pdb|8PRK|A Chain A, The R78k And D117e Active Site Variants Of Saccharomyces Cerevisiae Soluble Inorganic Pyrophosphatase: Structural Studies And Mechanistic Implications Length = 287 Back     alignment and structure
>pdb|2IK1|A Chain A, Yeast Inorganic Pyrophosphatase Variant Y93f With Magnesium And Phosphate Length = 286 Back     alignment and structure
>pdb|2IK0|A Chain A, Yeast Inorganic Pyrophosphatase Variant E48d With Magnesium And Phosphate Length = 286 Back     alignment and structure
>pdb|2IK7|A Chain A, Yeast Inorganic Pyrophosphatase Variant D120n With Magnesium And Phosphate Length = 286 Back     alignment and structure
>pdb|117E|A Chain A, The R78k And D117e Active Site Variants Of Saccharomyces Cerevisiae Soluble Inorganic Pyrophosphatase: Structural Studies And Mechanistic Implications Length = 286 Back     alignment and structure
>pdb|2IK6|A Chain A, Yeast Inorganic Pyrophosphatase Variant D120e With Magnesium And Phosphate Length = 286 Back     alignment and structure
>pdb|2IK9|A Chain A, Yeast Inorganic Pyrophosphatase Variant D152e With Magnesium And Phosphate Length = 286 Back     alignment and structure
>pdb|2IK2|A Chain A, Yeast Inorganic Pyrophosphatase Variant D115e With Magnesium And Phosphate Length = 286 Back     alignment and structure
>pdb|1YPP|A Chain A, Acid Anhydride Hydrolase Length = 286 Back     alignment and structure
>pdb|1PYP|A Chain A, X-Ray Diffraction Study Of Inorganic Pyrophosphatase From Baker,S Yeast At The 3 Angstroms Resolution (Russian) Length = 285 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query203
3q46_A178 TT-ippase; inorganic pyrophosphatase, hydrolase; H 1e-86
2prd_A174 Pyrophosphate phosphohydrolase; 2.00A {Thermus the 1e-84
3ld3_A199 Inorganic pyrophosphatase; structural genomics, se 1e-83
3gvf_A196 Inorganic pyrophosphatase; structural genomics, hy 3e-83
1sxv_A172 Inorganic pyrophosphatase; structural genomics, pp 1e-82
1qez_A173 Ppase, S-ppase, protein (inorganic pyrophosphatase 3e-82
2bqx_A173 Inorganic pyrophosphatase; hydrolase; 1.90A {Helic 1e-79
3fq3_A197 Inorganic pyrophosphatase:bacterial/archaeal INOR 2e-79
2au7_A175 Inorganic pyrophosphatase; hydrolase, mutant; 1.05 8e-79
3tr4_A178 Inorganic pyrophosphatase; central intermediary me 8e-74
3d53_A173 Inorganic pyrophosphatase; seattle structural G ce 3e-73
1e9g_A286 Ppase, inorganic pyrophosphatase; pyrophosphate ph 1e-62
>3q46_A TT-ippase; inorganic pyrophosphatase, hydrolase; HET: EPE; 0.99A {Thermococcus thioreducens} PDB: 3r6e_A* 3q3l_A 3i98_A 3q4w_A 3q9m_A* 3r5u_A 3r5v_A* 3q5v_A* 1ude_A 1twl_A Length = 178 Back     alignment and structure
 Score =  252 bits (645), Expect = 1e-86
 Identities = 66/138 (47%), Positives = 95/138 (68%)

Query: 39  HPWHDLEIGPGAPKIFNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPR 98
           +P+H+LE GP  P++   +IEI KGS+ KYELDK +GL+ +DRVLYS   YP +YG IP+
Sbjct: 2   NPFHELEPGPEVPEVVYALIEIPKGSRNKYELDKATGLLKLDRVLYSPFFYPVDYGIIPQ 61

Query: 99  TLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYND 158
           T  +D DP D+++IM+EPV P   + A+ IG+M M D G+KD K++AV  +DP +  + D
Sbjct: 62  TWYDDGDPFDIMVIMREPVYPLTIIEARPIGIMKMEDSGDKDWKVLAVPVEDPYFNDWKD 121

Query: 159 IKELPPHRLAEIRRFFED 176
           I ++P   L EI  FF+ 
Sbjct: 122 ISDVPKAFLDEIAHFFQR 139
>2prd_A Pyrophosphate phosphohydrolase; 2.00A {Thermus thermophilus} SCOP: b.40.5.1 Length = 174 Back     alignment and structure
>3ld3_A Inorganic pyrophosphatase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 1.75A {Anaplasma phagocytophilum} PDB: 3lo0_A Length = 199 Back     alignment and structure
>3gvf_A Inorganic pyrophosphatase; structural genomics, hydrolase, S structural genomics center for infectious disease, ssgcid; HET: PGE; 1.75A {Burkholderia pseudomallei 1710B} PDB: 3d63_A* 3eiy_A 3ej0_A* 3ej2_A* 3eiz_A* Length = 196 Back     alignment and structure
>1sxv_A Inorganic pyrophosphatase; structural genomics, ppase,, hydrolase; 1.30A {Mycobacterium tuberculosis} PDB: 1wcf_A 2uxs_A 4ecp_A Length = 172 Back     alignment and structure
>1qez_A Ppase, S-ppase, protein (inorganic pyrophosphatase); thermostability, magnesium, hydrolase; 2.70A {Sulfolobus acidocaldarius} SCOP: b.40.5.1 Length = 173 Back     alignment and structure
>2bqx_A Inorganic pyrophosphatase; hydrolase; 1.90A {Helicobacter pylori} PDB: 1ygz_A 2bqy_A Length = 173 Back     alignment and structure
>3fq3_A Inorganic pyrophosphatase:bacterial/archaeal INOR pyrophosphatase; ssgcid, inorganic phosphatase; 1.90A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3sw5_A Length = 197 Back     alignment and structure
>2au7_A Inorganic pyrophosphatase; hydrolase, mutant; 1.05A {Escherichia coli} PDB: 1i40_A 1i6t_A 1igp_A 1obw_A 2au6_A 2au8_A 2au9_A 2auu_A 1mjy_A 1faj_A 1ino_A 1ipw_A 1jfd_A 2eip_A 1mjz_A 1mjx_A 1mjw_A 3i4q_A* Length = 175 Back     alignment and structure
>3tr4_A Inorganic pyrophosphatase; central intermediary metabolism, hydrolase; HET: MSE; 2.00A {Coxiella burnetii} Length = 178 Back     alignment and structure
>3d53_A Inorganic pyrophosphatase; seattle structural G center for infectious disease, ssgcid, hydrolase, magnesium binding; 2.20A {Rickettsia prowazekii} PDB: 3emj_A* Length = 173 Back     alignment and structure
>1e9g_A Ppase, inorganic pyrophosphatase; pyrophosphate phosphohydrolase, hydrolase, manganese; HET: PO4; 1.15A {Saccharomyces cerevisiae} SCOP: b.40.5.1 PDB: 1e6a_A* 1wgi_A 1wgj_A 2ihp_A* 8prk_A 2ik6_A 2ik2_A 2ik4_A 117e_A 2ik1_A* 2ik9_A 2ik0_A 2ik7_A 1m38_A 1ypp_A 1huk_A 1huj_A 1pyp_A Length = 286 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query203
3q46_A178 TT-ippase; inorganic pyrophosphatase, hydrolase; H 100.0
2prd_A174 Pyrophosphate phosphohydrolase; 2.00A {Thermus the 100.0
3fq3_A197 Inorganic pyrophosphatase:bacterial/archaeal INOR 100.0
3gvf_A196 Inorganic pyrophosphatase; structural genomics, hy 100.0
3ld3_A199 Inorganic pyrophosphatase; structural genomics, se 100.0
1e9g_A286 Ppase, inorganic pyrophosphatase; pyrophosphate ph 100.0
2au7_A175 Inorganic pyrophosphatase; hydrolase, mutant; 1.05 100.0
3d53_A173 Inorganic pyrophosphatase; seattle structural G ce 100.0
2bqx_A173 Inorganic pyrophosphatase; hydrolase; 1.90A {Helic 100.0
3tr4_A178 Inorganic pyrophosphatase; central intermediary me 100.0
1qez_A173 Ppase, S-ppase, protein (inorganic pyrophosphatase 100.0
1sxv_A172 Inorganic pyrophosphatase; structural genomics, pp 100.0
>3q46_A TT-ippase; inorganic pyrophosphatase, hydrolase; HET: EPE; 0.99A {Thermococcus thioreducens} SCOP: b.40.5.1 PDB: 3r6e_A* 3q3l_A 3i98_A 3q4w_A 3q9m_A* 3r5u_A 3r5v_A* 3q5v_A* 1ude_A 1twl_A Back     alignment and structure
Probab=100.00  E-value=3.3e-65  Score=426.38  Aligned_cols=149  Identities=44%  Similarity=0.805  Sum_probs=143.8

Q ss_pred             cCcCCCCCCCCCCCCeeEEEEEeCCCCCceEEEeccCCCeEeeeecccccccccccCcCccccCCCCCcccEEEeccccC
Q 028820           38 AHPWHDLEIGPGAPKIFNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPV  117 (203)
Q Consensus        38 ~spwHdipl~~~~~~~vn~VVEIPrgS~~KyEid~~~g~i~~Dr~l~~~~~yP~NYGfIPqT~~gDgDPLDvlvl~~~p~  117 (203)
                      +|||||||++.+.|+.|||||||||||++|||+|+++|.+++||++++++.||+|||||||||++||||||||||++.|+
T Consensus         1 ~spwhdi~~g~~~p~~~nvvIEIP~gs~~KyE~dk~~g~i~~DR~l~~~~~YP~NYGfIP~Tl~~DgDPlDvlvl~~~~~   80 (178)
T 3q46_A            1 MNPFHELEPGPEVPEVVYALIEIPKGSRNKYELDKATGLLKLDRVLYSPFFYPVDYGIIPQTWYDDGDPFDIMVIMREPV   80 (178)
T ss_dssp             CCTTTTSCSCSBTTTBCCCEEEECTTCCEEEEECTTTSCEEEEEECSSSCCCSSEEEECTTCCBTTTBCCEEEECCSSCC
T ss_pred             CCccccCCCCCCCCCEEEEEEEECCCCCeeEEECCCCCCEEEeecccCCCCCCcccccCCCccCCCCCeeEEEEEcCCCC
Confidence            58999999999899999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCceEEEEEEEeeEeeeeCCCCCcEEEEEeCCCccccCCCCCCCCChhhHHHHHHHHHHhhhccccCCc
Q 028820          118 LPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDCILSTIYNGS  186 (203)
Q Consensus       118 ~~G~v~~vrviGvL~miD~gE~D~KIIaV~~~Dp~~~~i~di~Dv~~~~l~~I~~fFr~YK~l~~~~~~  186 (203)
                      .||++++||+||+|+|+|+||+|||||||+.+||+|++++|++||+++++++|+|||++||.++++.-+
T Consensus        81 ~pG~vi~~r~iGvl~m~Dege~D~KiiaV~~~Dp~~~~i~di~Dl~~~~l~~i~~fF~~YK~legK~v~  149 (178)
T 3q46_A           81 YPLTIIEARPIGIMKMEDSGDKDWKVLAVPVEDPYFNDWKDISDVPKAFLDEIAHFFQRYKELQGKTTK  149 (178)
T ss_dssp             CTTCBC-CEEEEEEEEEETTEECCEEEEECTTCGGGTTCCSGGGSCHHHHHHHHHHHHHTTGGGTCCEE
T ss_pred             CCceEEEEEEEEEEEeecCCCccceEEEeeCCCccccccCChHHCCHHHHHHHHHHHHHhcCcCCCceE
Confidence            999999999999999999999999999999999999999999999999999999999999999954433
>2prd_A Pyrophosphate phosphohydrolase; 2.00A {Thermus thermophilus} SCOP: b.40.5.1 Back     alignment and structure
>3fq3_A Inorganic pyrophosphatase:bacterial/archaeal INOR pyrophosphatase; ssgcid, inorganic phosphatase; 1.90A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3sw5_A Back     alignment and structure
>3gvf_A Inorganic pyrophosphatase; structural genomics, hydrolase, S structural genomics center for infectious disease, ssgcid; HET: PGE; 1.75A {Burkholderia pseudomallei 1710B} PDB: 3d63_A* 3eiy_A 3ej0_A* 3ej2_A* 3eiz_A* Back     alignment and structure
>3ld3_A Inorganic pyrophosphatase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 1.75A {Anaplasma phagocytophilum} PDB: 3lo0_A Back     alignment and structure
>1e9g_A Ppase, inorganic pyrophosphatase; pyrophosphate phosphohydrolase, hydrolase, manganese; HET: PO4; 1.15A {Saccharomyces cerevisiae} SCOP: b.40.5.1 PDB: 1e6a_A* 1wgi_A 1wgj_A 2ihp_A* 8prk_A 2ik6_A 2ik2_A 2ik4_A 117e_A 2ik1_A* 2ik9_A 2ik0_A 2ik7_A 1m38_A 1ypp_A 1huk_A 1huj_A 1pyp_A Back     alignment and structure
>2au7_A Inorganic pyrophosphatase; hydrolase, mutant; 1.05A {Escherichia coli} PDB: 1i40_A 1i6t_A 1igp_A 1obw_A 2au6_A 2au8_A 2au9_A 2auu_A 1mjy_A 1faj_A 1ino_A 1ipw_A 1jfd_A 2eip_A 1mjz_A 1mjx_A 1mjw_A 3i4q_A* Back     alignment and structure
>3d53_A Inorganic pyrophosphatase; seattle structural G center for infectious disease, ssgcid, hydrolase, magnesium binding; 2.20A {Rickettsia prowazekii} PDB: 3emj_A* Back     alignment and structure
>2bqx_A Inorganic pyrophosphatase; hydrolase; 1.90A {Helicobacter pylori} PDB: 1ygz_A 2bqy_A Back     alignment and structure
>3tr4_A Inorganic pyrophosphatase; central intermediary metabolism, hydrolase; HET: MSE; 2.00A {Coxiella burnetii} SCOP: b.40.5.0 Back     alignment and structure
>1qez_A Ppase, S-ppase, protein (inorganic pyrophosphatase); thermostability, magnesium, hydrolase; 2.70A {Sulfolobus acidocaldarius} SCOP: b.40.5.1 Back     alignment and structure
>1sxv_A Inorganic pyrophosphatase; structural genomics, ppase,, hydrolase; 1.30A {Mycobacterium tuberculosis} PDB: 1wcf_A 2uxs_A 4ecp_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 203
d1twla_173 b.40.5.1 (A:) Inorganic pyrophosphatase {Pyrococcu 5e-57
d2prda_174 b.40.5.1 (A:) Inorganic pyrophosphatase {Thermus t 1e-52
d1i40a_175 b.40.5.1 (A:) Inorganic pyrophosphatase {Escherich 1e-49
d1e9ga_284 b.40.5.1 (A:) Inorganic pyrophosphatase {Baker's y 2e-49
d1qeza_170 b.40.5.1 (A:) Inorganic pyrophosphatase {Archaeon 7e-48
>d1twla_ b.40.5.1 (A:) Inorganic pyrophosphatase {Pyrococcus furiosus [TaxId: 2261]} Length = 173 Back     information, alignment and structure

class: All beta proteins
fold: OB-fold
superfamily: Inorganic pyrophosphatase
family: Inorganic pyrophosphatase
domain: Inorganic pyrophosphatase
species: Pyrococcus furiosus [TaxId: 2261]

 Score =  175 bits (446), Expect = 5e-57
 Identities = 71/138 (51%), Positives = 98/138 (71%)

Query: 39  HPWHDLEIGPGAPKIFNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPR 98
           +P+HDLE GP  P++   +IEI KGS+ KYELDKK+GL+ +DRVLYS   YP +YG IPR
Sbjct: 1   NPFHDLEPGPDVPEVVYAIIEIPKGSRNKYELDKKTGLLKLDRVLYSPFFYPVDYGIIPR 60

Query: 99  TLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYND 158
           T  ED+DP D+++IM+EPV P   + A+ IGL  MID G+KD K++AV  +DP ++ + D
Sbjct: 61  TWYEDDDPFDIMVIMREPVYPLTIIEARPIGLFKMIDSGDKDYKVLAVPVEDPYFKDWKD 120

Query: 159 IKELPPHRLAEIRRFFED 176
           I ++P   L EI  FF+ 
Sbjct: 121 IDDVPKAFLDEIAHFFKR 138
>d2prda_ b.40.5.1 (A:) Inorganic pyrophosphatase {Thermus thermophilus [TaxId: 274]} Length = 174 Back     information, alignment and structure
>d1i40a_ b.40.5.1 (A:) Inorganic pyrophosphatase {Escherichia coli [TaxId: 562]} Length = 175 Back     information, alignment and structure
>d1e9ga_ b.40.5.1 (A:) Inorganic pyrophosphatase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 284 Back     information, alignment and structure
>d1qeza_ b.40.5.1 (A:) Inorganic pyrophosphatase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]} Length = 170 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query203
d1twla_173 Inorganic pyrophosphatase {Pyrococcus furiosus [Ta 100.0
d2prda_174 Inorganic pyrophosphatase {Thermus thermophilus [T 100.0
d1e9ga_284 Inorganic pyrophosphatase {Baker's yeast (Saccharo 100.0
d1qeza_170 Inorganic pyrophosphatase {Archaeon Sulfolobus aci 100.0
d1i40a_175 Inorganic pyrophosphatase {Escherichia coli [TaxId 100.0
>d1twla_ b.40.5.1 (A:) Inorganic pyrophosphatase {Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
class: All beta proteins
fold: OB-fold
superfamily: Inorganic pyrophosphatase
family: Inorganic pyrophosphatase
domain: Inorganic pyrophosphatase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=100.00  E-value=4.6e-63  Score=409.23  Aligned_cols=150  Identities=47%  Similarity=0.843  Sum_probs=143.7

Q ss_pred             CcCCCCCCCCCCCCeeEEEEEeCCCCCceEEEeccCCCeEeeeecccccccccccCcCccccCCCCCcccEEEeccccCC
Q 028820           39 HPWHDLEIGPGAPKIFNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVL  118 (203)
Q Consensus        39 spwHdipl~~~~~~~vn~VVEIPrgS~~KyEid~~~g~i~~Dr~l~~~~~yP~NYGfIPqT~~gDgDPLDvlvl~~~p~~  118 (203)
                      |||||||++++.|++|||||||||||++|||+|+++|.+++||.+++++.||||||||||||++||||||||||++.|+.
T Consensus         1 ~pwhdi~~~~~~p~~vn~viEIP~gs~~KyE~dk~~g~~~~dr~l~~~~~yP~nYGfiP~T~~~DgDPLDvlvl~~~~~~   80 (173)
T d1twla_           1 NPFHDLEPGPDVPEVVYAIIEIPKGSRNKYELDKKTGLLKLDRVLYSPFFYPVDYGIIPRTWYEDDDPFDIMVIMREPVY   80 (173)
T ss_dssp             CHHHHSCSCSBTTTBEEEEEEECTTCSEEEEECTTTCCEEEEEECSSSCCCSSEEEECTTCCBCCB-CCEEEECCSSCCC
T ss_pred             CCccCCCCCCCCCCeEEEEEEECCCCCcCEEEccCCCceeeeeecCCCccCCcccceeeccccCCCCCchheeccccccC
Confidence            79999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CceEEEEEEEeeEeeeeCCCCCcEEEEEeCCCccccCCCCCCCCChhhHHHHHHHHHHhhhccccCCcee
Q 028820          119 PGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDCILSTIYNGSIC  188 (203)
Q Consensus       119 ~G~v~~vrviGvL~miD~gE~D~KIIaV~~~Dp~~~~i~di~Dv~~~~l~~I~~fFr~YK~l~~~~~~~~  188 (203)
                      +|++++||+||+|+|+|+||.|||||||+++||++++++|++||+++++++|++||++||.++++.=++.
T Consensus        81 ~G~vv~~r~iG~l~m~D~ge~D~Kiiav~~~dp~~~~i~~i~dl~~~~l~~I~~fF~~YK~~egK~v~v~  150 (173)
T d1twla_          81 PLTIIEARPIGLFKMIDSGDKDYKVLAVPVEDPYFKDWKDIDDVPKAFLDEIAHFFKRYKELQGKEIIVE  150 (173)
T ss_dssp             TTCEEEEEEEEEEEEEETTEECCEEEEEETTCGGGTTCCSGGGSCHHHHHHHHHHHHHTTGGGTCCEEEE
T ss_pred             CceEEEEEEEEEEEeccCCCccceEEEEecCCchhhccCChHHCCHHHHHHHHHHHHHcCCCCCCceEEc
Confidence            9999999999999999999999999999999999999999999999999999999999999986543333
>d2prda_ b.40.5.1 (A:) Inorganic pyrophosphatase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1e9ga_ b.40.5.1 (A:) Inorganic pyrophosphatase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1qeza_ b.40.5.1 (A:) Inorganic pyrophosphatase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]} Back     information, alignment and structure
>d1i40a_ b.40.5.1 (A:) Inorganic pyrophosphatase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure