Citrus Sinensis ID: 028855

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200--
Protein Sequence
MSYLGVGVSPGNVPVYHGTVMKVVDRRIRLVELVLRCVICGLGVLAAVLVGTDTQVREIFSIQKKAKFTDMKALVFLVVANGIAAAYSLVQGVRCTVAMLKGSVLFNKPLAWAIFSGDQMMAYLTVAAVAAAAQSAVFAKLGQPELQWLKICNMYGKFCNQVGEGIASALLVSISMVVLSCISAFSLFRLYGGSKAKNGARW
Secondary Structure (PSIPRED)
ccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEEEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccc
Secondary Structure Prediction (SSPRO)
ccEEEccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccc
Coil and Loop (DISEMBL)
msylgvgvspgnvpvyhgtVMKVVDRRIRLVELVLRCVICGLGVLAAVLVGTDTQVREIFSIQKKAKFTDMKALVFLVVANGIAAAYSLVQGVRCTVAMLKGSVlfnkplawaifsGDQMMAYLTVAAVAAAAQSAVFAKLGQPELQWLKICNMYGKFCNQVGEGIASALLVSISMVVLSCISAFSLFrlyggskakngarw
Flexible Loop (DISEMBL)
msylgvgvspgnvpvyhgTVMKVVDRRIRLVELVLRCVICGLGVLAAVLVGTDTQVREIFSIqkkakftdmKALVFLVVANGIAAAYSLVQGVRCTVAMLKGSVLFNKPLAWAIFSGDQMMAYLTVAAVAAAAQSAVFAKLGQPELQWLKICNMYGKFCNQVGEGIASALLVSISMVVLSCISAFSlfrlyggskakngarw
Low Complexity Region (SEG)
MSYLGVGVSPGNVPVYHGTVMKVVDRRIRLVELVLRCVICGLGVLAAVLVGTDTQVREIFSIQKKAKFTDMKALVFLVVANGIAAAYSLVQGVRCTVAMLKGSVLFNKPLAWAIFSGDQMMAYLTvaavaaaaqsavfaKLGQPELQWLKICNMYGKFCNQVGEGIASALLVSISMVVLSCISAFSLFRLYGGSKAKNGARW
Disordered region (IsUnstruct)
***LGVGVSPGNVPVYHGTVMKVVDRRIRLVELVLRCVICGLGVLAAVLVGTDTQVREIFSIQKKAKFTDMKALVFLVVANGIAAAYSLVQGVRCTVAMLKGSVLFNKPLAWAIFSGDQMMAYLTVAAVAAAAQSAVFAKLGQPELQWLKICNMYGKFCNQVGEGIASALLVSISMVVLSCISAFSLFRLYG**********
Disordered Region (DISOPRED)
****************************RLVELVLRCVICGLGVLAAVLVGTDTQVREIFSIQKKAKFTDMKALVFLVVANGIAAAYSLVQGVRCTVAMLKGSVLFNKPLAWAIFSGDQMMAYLTVAAVAAAAQSAVFAKLGQPELQWLKICNMYGKFCNQVGEGIASALLVSISMVVLSCISAFSL***************
Disordered Region (DISEMBL)
MSYLGVGVSPGNVPVYHGTVMKVVDRRIRLVELVLRCVICGLGVLAAVLVGTDTQVREIFSIQKKAKFTDMKALVFLVVANGIAAAYSLVQGVRCTVAMLKGSVLFNKPLAWAIFSGDQMMAYLTVAAVAAAAQSAVFAKLGQPELQWLKICNMYGKFCNQVGEGIASALLVSISMVVLSCISAFSLFRLYGGSKAKNGARW
Disordered Region (DISPRO)
*******VSPGNVPVY*****KVVDRRIRLVELVLRCVICGLGVLAAVLVGTDTQVREIFSIQKKAKFTDMKALVFLVVANGIAAAYSLVQGVRCTVAMLKGSVLFNKPLAWAIFSGDQMMAYLTVAAVAAAAQSAVFAKLGQPELQWLKICNMYGKFCNQVGEGIASALLVSISMVVLSCISAFSLFRLYGG*********
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSYLGVGVSPGNVPVYHGTVMKVVDRRIRLVELVLRCVICGLGVLAAVLVGTDTQVREIFSIQKKAKFTDMKALVFLVVANGIAAAYSLVQGVRCTVAMLKGSVLFNKPLAWAIFSGDQMMAYLTVAAVAAAAQSAVFAKLGQPELQWLKICNMYGKFCNQVGEGIASALLVSISMVVLSCISAFSLFRLYGGSKAKNGARW
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	202	2.2.26 [Sep-21-2011]
B9HD38	202	CASP-like protein POPTRDR	yes	no	1.0	1.0	0.876	9e-97
B9IH36	202	CASP-like protein POPTRDR	no	no	1.0	1.0	0.876	3e-95
B9SA89	202	CASP-like protein RCOM_08	N/A	no	1.0	1.0	0.871	3e-93
A7R385	202	CASP-like protein GSVIVT0	yes	no	1.0	1.0	0.826	7e-93
E4MWF4	199	CASP-like protein 1 OS=Th	N/A	no	0.985	1.0	0.742	8e-79
Q8L924	201	CASP-like protein At2g357	yes	no	0.995	1.0	0.727	1e-75
D7LIK3	201	CASP-like protein ARALYDR	N/A	no	0.995	1.0	0.717	6e-74
D7M9V1	182	CASP-like protein ARALYDR	N/A	no	0.900	1.0	0.642	2e-66
Q8L9B5	182	CASP-like protein At4g164	no	no	0.900	1.0	0.642	4e-66
C5WUP3	208	CASP-like protein Sb01g04	N/A	no	0.945	0.918	0.548	2e-46

>sp|B9HD38|CSPLE_POPTR CASP-like protein POPTRDRAFT_818956 OS=Populus trichocarpa GN=POPTRDRAFT_818956 PE=3 SV=1

 Score =  352 bits (903), Expect = 9e-97,   Method: Compositional matrix adjust.
 Identities = 177/202 (87%), Positives = 192/202 (95%)

Query: 1   MSYLGVGVSPGNVPVYHGTVMKVVDRRIRLVELVLRCVICGLGVLAAVLVGTDTQVREIF 60
           MSYLGVGVSPGNVPVYHG  +KV+DRR+RL ELVLRCVIC LGVLAAVLVGTDTQV+EIF
Sbjct: 1   MSYLGVGVSPGNVPVYHGMNLKVIDRRVRLAELVLRCVICALGVLAAVLVGTDTQVKEIF 60

Query: 61  SIQKKAKFTDMKALVFLVVANGIAAAYSLVQGVRCTVAMLKGSVLFNKPLAWAIFSGDQM 120
           SIQKKA+FTDMKALVFLVVANGIAAAYSLVQGVRC V M+KGSVLF+KPLAW IFSGDQM
Sbjct: 61  SIQKKARFTDMKALVFLVVANGIAAAYSLVQGVRCVVGMVKGSVLFSKPLAWVIFSGDQM 120

Query: 121 MAYLTVAAVAAAAQSAVFAKLGQPELQWLKICNMYGKFCNQVGEGIASALLVSISMVVLS 180
           MAYLT++AVAAA QSA FAKLGQP+LQW+KICNMYGKFCNQVGEGIASALLVS+SMVVLS
Sbjct: 121 MAYLTLSAVAAAVQSASFAKLGQPDLQWMKICNMYGKFCNQVGEGIASALLVSVSMVVLS 180

Query: 181 CISAFSLFRLYGGSKAKNGARW 202
           CIS+FSLFRLYGG+K K+GARW
Sbjct: 181 CISSFSLFRLYGGNKGKDGARW 202

Populus trichocarpa (taxid: 3694)

>sp|B9IH36|CSPLJ_POPTR CASP-like protein POPTRDRAFT_575900 OS=Populus trichocarpa GN=POPTRDRAFT_575900 PE=2 SV=1

 Score =  347 bits (890), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 177/202 (87%), Positives = 191/202 (94%)

Query: 1   MSYLGVGVSPGNVPVYHGTVMKVVDRRIRLVELVLRCVICGLGVLAAVLVGTDTQVREIF 60
           MSYLGVGVSPGNVPVYHGT  KV+DRR+RL ELVLRCVIC LGVLAAVLVGTDTQV+EIF
Sbjct: 1   MSYLGVGVSPGNVPVYHGTNSKVIDRRVRLAELVLRCVICCLGVLAAVLVGTDTQVKEIF 60

Query: 61  SIQKKAKFTDMKALVFLVVANGIAAAYSLVQGVRCTVAMLKGSVLFNKPLAWAIFSGDQM 120
           SIQKKA+FTDMKALVFLV ANGIAAAYS VQGVRC V M+KGSVLF+KPLAW IFSGDQM
Sbjct: 61  SIQKKARFTDMKALVFLVAANGIAAAYSFVQGVRCVVGMVKGSVLFSKPLAWVIFSGDQM 120

Query: 121 MAYLTVAAVAAAAQSAVFAKLGQPELQWLKICNMYGKFCNQVGEGIASALLVSISMVVLS 180
           MAYLT++AVAAAAQS+VFAKLGQP+LQW+KIC MYGKFCNQVGEGIASALLVS+SMVVLS
Sbjct: 121 MAYLTMSAVAAAAQSSVFAKLGQPDLQWMKICTMYGKFCNQVGEGIASALLVSVSMVVLS 180

Query: 181 CISAFSLFRLYGGSKAKNGARW 202
           CISAFSLFRLYGG+K K+GARW
Sbjct: 181 CISAFSLFRLYGGNKGKDGARW 202

Populus trichocarpa (taxid: 3694)

>sp|B9SA89|CSPLB_RICCO CASP-like protein RCOM_0864260 OS=Ricinus communis GN=RCOM_0864260 PE=2 SV=1

 Score =  340 bits (873), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 176/202 (87%), Positives = 193/202 (95%)

Query: 1   MSYLGVGVSPGNVPVYHGTVMKVVDRRIRLVELVLRCVICGLGVLAAVLVGTDTQVREIF 60
           MSYLGVGVSPGNVPVYHG+ +KV+D+R+RL ELVLRC+ICGLGVLAAVLVGTDTQV+EIF
Sbjct: 1   MSYLGVGVSPGNVPVYHGSNLKVIDKRVRLAELVLRCLICGLGVLAAVLVGTDTQVKEIF 60

Query: 61  SIQKKAKFTDMKALVFLVVANGIAAAYSLVQGVRCTVAMLKGSVLFNKPLAWAIFSGDQM 120
           SIQKKA+FTDMKALVFLV+ANGIAAAYSL+QGVRC V M++GS LF+KPLAWAIFSGDQM
Sbjct: 61  SIQKKARFTDMKALVFLVIANGIAAAYSLLQGVRCVVGMVRGSALFSKPLAWAIFSGDQM 120

Query: 121 MAYLTVAAVAAAAQSAVFAKLGQPELQWLKICNMYGKFCNQVGEGIASALLVSISMVVLS 180
           MAYLTVAAVAAAAQSAVFAKLGQPELQW+KICNMYGKFCNQVGEGIASALLVS+SMVVLS
Sbjct: 121 MAYLTVAAVAAAAQSAVFAKLGQPELQWMKICNMYGKFCNQVGEGIASALLVSVSMVVLS 180

Query: 181 CISAFSLFRLYGGSKAKNGARW 202
           CISAFSLFRLYG +K K+  RW
Sbjct: 181 CISAFSLFRLYGANKGKDCTRW 202

Ricinus communis (taxid: 3988)

>sp|A7R385|CSPLC_VITVI CASP-like protein GSVIVT00013502001 OS=Vitis vinifera GN=GSVIVT00013502001 PE=2 SV=1

 Score =  339 bits (870), Expect = 7e-93,   Method: Compositional matrix adjust.
 Identities = 167/202 (82%), Positives = 190/202 (94%)

Query: 1   MSYLGVGVSPGNVPVYHGTVMKVVDRRIRLVELVLRCVICGLGVLAAVLVGTDTQVREIF 60
           MSYLGVGVSPGNVPVYHGT +KVVDRR+RL ELVLRCVICGLG+LAAVLVGTDTQV+ IF
Sbjct: 1   MSYLGVGVSPGNVPVYHGTNLKVVDRRVRLAELVLRCVICGLGILAAVLVGTDTQVKVIF 60

Query: 61  SIQKKAKFTDMKALVFLVVANGIAAAYSLVQGVRCTVAMLKGSVLFNKPLAWAIFSGDQM 120
           +IQKKAKFTDMKALVFLV+ANGIAAAYSL+QG+RC V+M++GSVLF+KPLAWAIFSGDQ+
Sbjct: 61  TIQKKAKFTDMKALVFLVIANGIAAAYSLIQGLRCVVSMVRGSVLFSKPLAWAIFSGDQV 120

Query: 121 MAYLTVAAVAAAAQSAVFAKLGQPELQWLKICNMYGKFCNQVGEGIASALLVSISMVVLS 180
           +AYLT+AAVAAAAQS+VF + GQPELQW+KICNMYGKFCNQVGEGI SA+ VS+SMV+LS
Sbjct: 121 IAYLTLAAVAAAAQSSVFGEFGQPELQWMKICNMYGKFCNQVGEGIVSAVGVSLSMVILS 180

Query: 181 CISAFSLFRLYGGSKAKNGARW 202
            ISAFSLFRLYGG+K  +G RW
Sbjct: 181 GISAFSLFRLYGGNKGTSGGRW 202

Vitis vinifera (taxid: 29760)

>sp|E4MWF4|CSPL1_THEHA CASP-like protein 1 OS=Thellungiella halophila PE=2 SV=1

 Score =  293 bits (749), Expect = 8e-79,   Method: Compositional matrix adjust.
 Identities = 150/202 (74%), Positives = 178/202 (88%), Gaps = 3/202 (1%)

Query: 1   MSYLGVGVSPGNVPVYHGTVMKVVDRRIRLVELVLRCVICGLGVLAAVLVGTDTQVREIF 60
           MSYLGVG+SP NV    GT MK++DR++RL EL+LRC +C L ++AA+L+ TDTQV+EIF
Sbjct: 1   MSYLGVGLSPVNVA---GTKMKLMDRKVRLTELILRCSVCALALVAAILIATDTQVKEIF 57

Query: 61  SIQKKAKFTDMKALVFLVVANGIAAAYSLVQGVRCTVAMLKGSVLFNKPLAWAIFSGDQM 120
           +IQKKAK+TDMKALVFLVV NGIAAAYSL+  VRC V M+KGSVLF+KPLAWAIFSGDQ 
Sbjct: 58  TIQKKAKYTDMKALVFLVVVNGIAAAYSLLHMVRCVVGMMKGSVLFSKPLAWAIFSGDQA 117

Query: 121 MAYLTVAAVAAAAQSAVFAKLGQPELQWLKICNMYGKFCNQVGEGIASALLVSISMVVLS 180
           +AYLTVA VAAAAQSA FAKLG+PELQW+KIC +YGKFCNQVGEGIA+ALL SI MV++S
Sbjct: 118 IAYLTVAGVAAAAQSAAFAKLGEPELQWMKICTIYGKFCNQVGEGIATALLASIGMVLIS 177

Query: 181 CISAFSLFRLYGGSKAKNGARW 202
            ISAF+LFRLYGG+KA+ G+RW
Sbjct: 178 SISAFALFRLYGGNKAQQGSRW 199

Thellungiella halophila (taxid: 98038)

>sp|Q8L924|CSPL7_ARATH CASP-like protein At2g35760 OS=Arabidopsis thaliana GN=At2g35760 PE=2 SV=2

 Score =  282 bits (722), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 147/202 (72%), Positives = 171/202 (84%), Gaps = 1/202 (0%)

Query: 1   MSYLGVGVSPGNVPVYHGTVMKVVDRRIRLVELVLRCVICGLGVLAAVLVGTDTQVREIF 60
           MSYLGVGVSPGNV     T MK++DR++R+ EL+LRC++C L ++AA+L+ TD QVREIF
Sbjct: 1   MSYLGVGVSPGNVS-GSTTKMKLIDRKVRVTELILRCLVCVLALVAAILIATDVQVREIF 59

Query: 61  SIQKKAKFTDMKALVFLVVANGIAAAYSLVQGVRCTVAMLKGSVLFNKPLAWAIFSGDQM 120
            IQKKAKFTDMKALV LVV NGIAA YSLVQ VRC V ++KG VLF+KPLAWAIF GDQ 
Sbjct: 60  MIQKKAKFTDMKALVLLVVVNGIAAGYSLVQAVRCVVGLMKGRVLFSKPLAWAIFFGDQA 119

Query: 121 MAYLTVAAVAAAAQSAVFAKLGQPELQWLKICNMYGKFCNQVGEGIASALLVSISMVVLS 180
           +AYL VA VAAAAQSA FAKLG+PELQW+KICNMYGKFCNQVGEGIASAL   I MV++S
Sbjct: 120 VAYLCVAGVAAAAQSAAFAKLGEPELQWMKICNMYGKFCNQVGEGIASALFACIGMVLIS 179

Query: 181 CISAFSLFRLYGGSKAKNGARW 202
           CISAF +FRLYGGSK++  +RW
Sbjct: 180 CISAFGVFRLYGGSKSRPSSRW 201

Arabidopsis thaliana (taxid: 3702)

>sp|D7LIK3|CSPL3_ARALL CASP-like protein ARALYDRAFT_482547 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_482547 PE=3 SV=1

 Score =  276 bits (706), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 145/202 (71%), Positives = 169/202 (83%), Gaps = 1/202 (0%)

Query: 1   MSYLGVGVSPGNVPVYHGTVMKVVDRRIRLVELVLRCVICGLGVLAAVLVGTDTQVREIF 60
           MSYLGVGVSPGNV     T MK++DR++R+ EL+LR ++C   ++AA+LV TD QVREIF
Sbjct: 1   MSYLGVGVSPGNV-TGSSTKMKLIDRKVRVTELILRSLVCAFALVAAILVATDVQVREIF 59

Query: 61  SIQKKAKFTDMKALVFLVVANGIAAAYSLVQGVRCTVAMLKGSVLFNKPLAWAIFSGDQM 120
           +IQKKAKFTDMKALVFLVV NGIAA YSLVQ V C V ++KGSVL ++PLAWAIF GDQ 
Sbjct: 60  TIQKKAKFTDMKALVFLVVINGIAAGYSLVQAVCCLVGLMKGSVLLSEPLAWAIFFGDQA 119

Query: 121 MAYLTVAAVAAAAQSAVFAKLGQPELQWLKICNMYGKFCNQVGEGIASALLVSISMVVLS 180
           +AYL VA VAAAAQSA FAKLGQPELQW+KIC+MYGKFCNQVGEGIASAL   I MV++S
Sbjct: 120 VAYLCVAGVAAAAQSAAFAKLGQPELQWMKICDMYGKFCNQVGEGIASALFACIGMVLIS 179

Query: 181 CISAFSLFRLYGGSKAKNGARW 202
           CISAF +FRLYGGSK +  +RW
Sbjct: 180 CISAFGVFRLYGGSKPRQSSRW 201

Arabidopsis lyrata subsp. lyrata (taxid: 81972)

>sp|D7M9V1|CSPL7_ARALL CASP-like protein ARALYDRAFT_915107 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_915107 PE=3 SV=1

 Score =  251 bits (641), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 117/182 (64%), Positives = 148/182 (81%)

Query: 21  MKVVDRRIRLVELVLRCVICGLGVLAAVLVGTDTQVREIFSIQKKAKFTDMKALVFLVVA 80
           MK++DRR+RL EL+LRC I    +LA +LV TDT+V+ IF+I+K AK+TDMKA+VFLVVA
Sbjct: 1   MKLIDRRMRLTELLLRCSISVFALLALILVVTDTEVKLIFTIKKTAKYTDMKAVVFLVVA 60

Query: 81  NGIAAAYSLVQGVRCTVAMLKGSVLFNKPLAWAIFSGDQMMAYLTVAAVAAAAQSAVFAK 140
           NGIAA YSL+Q VRC V  +KG VLF+KPLAWA FSGDQ MAYL VAA+AA A+S V A+
Sbjct: 61  NGIAAVYSLLQSVRCVVGTMKGRVLFSKPLAWAFFSGDQAMAYLNVAAIAATAESGVIAR 120

Query: 141 LGQPELQWLKICNMYGKFCNQVGEGIASALLVSISMVVLSCISAFSLFRLYGGSKAKNGA 200
            G+ +LQW+++CNMYGKFCNQ+  G++SALL SI+MV +SCISAFSLFRLYG ++ +   
Sbjct: 121 EGEEDLQWMRVCNMYGKFCNQMAIGVSSALLASIAMVFVSCISAFSLFRLYGATRDRRTT 180

Query: 201 RW 202
            W
Sbjct: 181 PW 182

Arabidopsis lyrata subsp. lyrata (taxid: 81972)

>sp|Q8L9B5|CSPLP_ARATH CASP-like protein At4g16442 OS=Arabidopsis thaliana GN=At4g16442 PE=2 SV=1

 Score =  250 bits (639), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 117/182 (64%), Positives = 147/182 (80%)

Query: 21  MKVVDRRIRLVELVLRCVICGLGVLAAVLVGTDTQVREIFSIQKKAKFTDMKALVFLVVA 80
           MK++DRR+RL EL+LRC I    +LA +LV TDT+V+ IF+I+K AK+TDMKA+VFLVVA
Sbjct: 1   MKLIDRRMRLTELLLRCSISVFALLALILVVTDTEVKLIFTIKKTAKYTDMKAVVFLVVA 60

Query: 81  NGIAAAYSLVQGVRCTVAMLKGSVLFNKPLAWAIFSGDQMMAYLTVAAVAAAAQSAVFAK 140
           NGIAA YSL+Q VRC V  +KG VLF+KPLAWA FSGDQ MAYL VAA+AA A+S V A+
Sbjct: 61  NGIAAVYSLLQSVRCVVGTMKGKVLFSKPLAWAFFSGDQAMAYLNVAAIAATAESGVIAR 120

Query: 141 LGQPELQWLKICNMYGKFCNQVGEGIASALLVSISMVVLSCISAFSLFRLYGGSKAKNGA 200
            G+ +LQW+++C MYGKFCNQ+  G++SALL SI+MV +SCISAFSLFRLYG +K +   
Sbjct: 121 EGEEDLQWMRVCTMYGKFCNQMAIGVSSALLASIAMVFVSCISAFSLFRLYGATKDRRTT 180

Query: 201 RW 202
            W
Sbjct: 181 PW 182

Arabidopsis thaliana (taxid: 3702)

>sp|C5WUP3|CSPL4_SORBI CASP-like protein Sb01g044070 OS=Sorghum bicolor GN=Sb01g044070 PE=3 SV=1

 Score =  185 bits (469), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 107/195 (54%), Positives = 143/195 (73%), Gaps = 4/195 (2%)

Query: 7   GVSPGNVPV-YHGTVMKV---VDRRIRLVELVLRCVICGLGVLAAVLVGTDTQVREIFSI 62
           GVSPGNVPV Y+G   +V   ++RR+R  EL +RC  CGL VLAA L+G D Q R IFS+
Sbjct: 13  GVSPGNVPVCYYGAAGRVPAALERRVRAAELFMRCAACGLAVLAAALLGADRQTRTIFSV 72

Query: 63  QKKAKFTDMKALVFLVVANGIAAAYSLVQGVRCTVAMLKGSVLFNKPLAWAIFSGDQMMA 122
           +K A+FTDM++LVFLV+ANG+AA YSL+QG RC V++L G VL N+P+AWAIFS DQ+MA
Sbjct: 73  EKTARFTDMQSLVFLVIANGMAACYSLLQGARCLVSILTGGVLINRPMAWAIFSCDQVMA 132

Query: 123 YLTVAAVAAAAQSAVFAKLGQPELQWLKICNMYGKFCNQVGEGIASALLVSISMVVLSCI 182
           Y T+ AVA A ++A+  K G  + QW+  C+ Y +FC Q G  +A A+  S++MV +S +
Sbjct: 133 YFTITAVAVAMEAAMIGKYGSLQFQWMNTCHFYKRFCAQAGGAVACAVAASLNMVGISLV 192

Query: 183 SAFSLFRLYGGSKAK 197
           SAF+LFRLYG  K +
Sbjct: 193 SAFNLFRLYGSGKGR 207

Sorghum bicolor (taxid: 4558)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	202
224086524	202	predicted protein [Populus trichocarpa]	1.0	1.0	0.876	5e-95
224139482	202	predicted protein [Populus trichocarpa]	1.0	1.0	0.876	1e-93
255563814	202	conserved hypothetical protein [Ricinus	1.0	1.0	0.871	2e-91
226713184	202	RecName: Full=CASP-like protein GSVIVT00	1.0	1.0	0.826	4e-91
356532668	203	PREDICTED: CASP-like protein GSVIVT00013	0.975	0.970	0.781	4e-88
356557971	202	PREDICTED: CASP-like protein GSVIVT00013	0.975	0.975	0.771	3e-87
444436411	203	UPF-like protein [Eucalyptus cladocalyx]	1.0	0.995	0.807	1e-83
357448001	201	hypothetical protein MTR_2g026530 [Medic	0.995	1.0	0.811	2e-83
341958528	199	RecName: Full=CASP-like protein 1 gi|312	0.985	1.0	0.742	4e-77
356562501	201	PREDICTED: CASP-like protein GSVIVT00013	0.975	0.980	0.756	2e-76

>gi|224086524|ref|XP_002307903.1| predicted protein [Populus trichocarpa] gi|341958562|sp|B9HD38.1|CSPLE_POPTR RecName: Full=CASP-like protein POPTRDRAFT_818956 gi|222853879|gb|EEE91426.1| predicted protein [Populus trichocarpa]

 Score =  352 bits (903), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 177/202 (87%), Positives = 192/202 (95%)

Query: 1   MSYLGVGVSPGNVPVYHGTVMKVVDRRIRLVELVLRCVICGLGVLAAVLVGTDTQVREIF 60
           MSYLGVGVSPGNVPVYHG  +KV+DRR+RL ELVLRCVIC LGVLAAVLVGTDTQV+EIF
Sbjct: 1   MSYLGVGVSPGNVPVYHGMNLKVIDRRVRLAELVLRCVICALGVLAAVLVGTDTQVKEIF 60

Query: 61  SIQKKAKFTDMKALVFLVVANGIAAAYSLVQGVRCTVAMLKGSVLFNKPLAWAIFSGDQM 120
           SIQKKA+FTDMKALVFLVVANGIAAAYSLVQGVRC V M+KGSVLF+KPLAW IFSGDQM
Sbjct: 61  SIQKKARFTDMKALVFLVVANGIAAAYSLVQGVRCVVGMVKGSVLFSKPLAWVIFSGDQM 120

Query: 121 MAYLTVAAVAAAAQSAVFAKLGQPELQWLKICNMYGKFCNQVGEGIASALLVSISMVVLS 180
           MAYLT++AVAAA QSA FAKLGQP+LQW+KICNMYGKFCNQVGEGIASALLVS+SMVVLS
Sbjct: 121 MAYLTLSAVAAAVQSASFAKLGQPDLQWMKICNMYGKFCNQVGEGIASALLVSVSMVVLS 180

Query: 181 CISAFSLFRLYGGSKAKNGARW 202
           CIS+FSLFRLYGG+K K+GARW
Sbjct: 181 CISSFSLFRLYGGNKGKDGARW 202

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224139482|ref|XP_002323133.1| predicted protein [Populus trichocarpa] gi|238055377|sp|B9IH36.1|CSPLJ_POPTR RecName: Full=CASP-like protein POPTRDRAFT_575900 gi|222867763|gb|EEF04894.1| predicted protein [Populus trichocarpa]

 Score =  347 bits (890), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 177/202 (87%), Positives = 191/202 (94%)

Query: 1   MSYLGVGVSPGNVPVYHGTVMKVVDRRIRLVELVLRCVICGLGVLAAVLVGTDTQVREIF 60
           MSYLGVGVSPGNVPVYHGT  KV+DRR+RL ELVLRCVIC LGVLAAVLVGTDTQV+EIF
Sbjct: 1   MSYLGVGVSPGNVPVYHGTNSKVIDRRVRLAELVLRCVICCLGVLAAVLVGTDTQVKEIF 60

Query: 61  SIQKKAKFTDMKALVFLVVANGIAAAYSLVQGVRCTVAMLKGSVLFNKPLAWAIFSGDQM 120
           SIQKKA+FTDMKALVFLV ANGIAAAYS VQGVRC V M+KGSVLF+KPLAW IFSGDQM
Sbjct: 61  SIQKKARFTDMKALVFLVAANGIAAAYSFVQGVRCVVGMVKGSVLFSKPLAWVIFSGDQM 120

Query: 121 MAYLTVAAVAAAAQSAVFAKLGQPELQWLKICNMYGKFCNQVGEGIASALLVSISMVVLS 180
           MAYLT++AVAAAAQS+VFAKLGQP+LQW+KIC MYGKFCNQVGEGIASALLVS+SMVVLS
Sbjct: 121 MAYLTMSAVAAAAQSSVFAKLGQPDLQWMKICTMYGKFCNQVGEGIASALLVSVSMVVLS 180

Query: 181 CISAFSLFRLYGGSKAKNGARW 202
           CISAFSLFRLYGG+K K+GARW
Sbjct: 181 CISAFSLFRLYGGNKGKDGARW 202

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255563814|ref|XP_002522908.1| conserved hypothetical protein [Ricinus communis] gi|288558967|sp|B9SA89.1|CSPLB_RICCO RecName: Full=CASP-like protein RCOM_0864260 gi|223537893|gb|EEF39508.1| conserved hypothetical protein [Ricinus communis]

 Score =  340 bits (873), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 176/202 (87%), Positives = 193/202 (95%)

Query: 1   MSYLGVGVSPGNVPVYHGTVMKVVDRRIRLVELVLRCVICGLGVLAAVLVGTDTQVREIF 60
           MSYLGVGVSPGNVPVYHG+ +KV+D+R+RL ELVLRC+ICGLGVLAAVLVGTDTQV+EIF
Sbjct: 1   MSYLGVGVSPGNVPVYHGSNLKVIDKRVRLAELVLRCLICGLGVLAAVLVGTDTQVKEIF 60

Query: 61  SIQKKAKFTDMKALVFLVVANGIAAAYSLVQGVRCTVAMLKGSVLFNKPLAWAIFSGDQM 120
           SIQKKA+FTDMKALVFLV+ANGIAAAYSL+QGVRC V M++GS LF+KPLAWAIFSGDQM
Sbjct: 61  SIQKKARFTDMKALVFLVIANGIAAAYSLLQGVRCVVGMVRGSALFSKPLAWAIFSGDQM 120

Query: 121 MAYLTVAAVAAAAQSAVFAKLGQPELQWLKICNMYGKFCNQVGEGIASALLVSISMVVLS 180
           MAYLTVAAVAAAAQSAVFAKLGQPELQW+KICNMYGKFCNQVGEGIASALLVS+SMVVLS
Sbjct: 121 MAYLTVAAVAAAAQSAVFAKLGQPELQWMKICNMYGKFCNQVGEGIASALLVSVSMVVLS 180

Query: 181 CISAFSLFRLYGGSKAKNGARW 202
           CISAFSLFRLYG +K K+  RW
Sbjct: 181 CISAFSLFRLYGANKGKDCTRW 202

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|226713184|sp|A7R385.1|CSPLC_VITVI RecName: Full=CASP-like protein GSVIVT00013502001

 Score =  339 bits (870), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 167/202 (82%), Positives = 190/202 (94%)

Query: 1   MSYLGVGVSPGNVPVYHGTVMKVVDRRIRLVELVLRCVICGLGVLAAVLVGTDTQVREIF 60
           MSYLGVGVSPGNVPVYHGT +KVVDRR+RL ELVLRCVICGLG+LAAVLVGTDTQV+ IF
Sbjct: 1   MSYLGVGVSPGNVPVYHGTNLKVVDRRVRLAELVLRCVICGLGILAAVLVGTDTQVKVIF 60

Query: 61  SIQKKAKFTDMKALVFLVVANGIAAAYSLVQGVRCTVAMLKGSVLFNKPLAWAIFSGDQM 120
           +IQKKAKFTDMKALVFLV+ANGIAAAYSL+QG+RC V+M++GSVLF+KPLAWAIFSGDQ+
Sbjct: 61  TIQKKAKFTDMKALVFLVIANGIAAAYSLIQGLRCVVSMVRGSVLFSKPLAWAIFSGDQV 120

Query: 121 MAYLTVAAVAAAAQSAVFAKLGQPELQWLKICNMYGKFCNQVGEGIASALLVSISMVVLS 180
           +AYLT+AAVAAAAQS+VF + GQPELQW+KICNMYGKFCNQVGEGI SA+ VS+SMV+LS
Sbjct: 121 IAYLTLAAVAAAAQSSVFGEFGQPELQWMKICNMYGKFCNQVGEGIVSAVGVSLSMVILS 180

Query: 181 CISAFSLFRLYGGSKAKNGARW 202
            ISAFSLFRLYGG+K  +G RW
Sbjct: 181 GISAFSLFRLYGGNKGTSGGRW 202

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356532668|ref|XP_003534893.1| PREDICTED: CASP-like protein GSVIVT00013502001-like isoform 1 [Glycine max]

 Score =  329 bits (844), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 154/197 (78%), Positives = 179/197 (90%)

Query: 2   SYLGVGVSPGNVPVYHGTVMKVVDRRIRLVELVLRCVICGLGVLAAVLVGTDTQVREIFS 61
           SYLGVGVSPGNVPVYH T + V+DRRI++ ELVLRCVI GLGVLAAVLVGTD+QV+E FS
Sbjct: 3   SYLGVGVSPGNVPVYHSTNVNVLDRRIKITELVLRCVILGLGVLAAVLVGTDSQVKEFFS 62

Query: 62  IQKKAKFTDMKALVFLVVANGIAAAYSLVQGVRCTVAMLKGSVLFNKPLAWAIFSGDQMM 121
            QK+AKFTDMK+LVFLVVANG+A+ YSL+QG+RC ++M++G VLF+KPLAWAIFSGDQ+M
Sbjct: 63  FQKEAKFTDMKSLVFLVVANGLASGYSLIQGLRCIISMIRGRVLFSKPLAWAIFSGDQVM 122

Query: 122 AYLTVAAVAAAAQSAVFAKLGQPELQWLKICNMYGKFCNQVGEGIASALLVSISMVVLSC 181
           AY+TVA V AA QS V A++GQPELQW+KICNMYGKFCNQVGEGIASA + S+SMVVLSC
Sbjct: 123 AYVTVATVVAAGQSGVIARVGQPELQWMKICNMYGKFCNQVGEGIASAFVASLSMVVLSC 182

Query: 182 ISAFSLFRLYGGSKAKN 198
           ISAFSLFRLYGG+K KN
Sbjct: 183 ISAFSLFRLYGGNKTKN 199

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356557971|ref|XP_003547283.1| PREDICTED: CASP-like protein GSVIVT00013502001-like [Glycine max]

 Score =  326 bits (836), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 152/197 (77%), Positives = 181/197 (91%)

Query: 2   SYLGVGVSPGNVPVYHGTVMKVVDRRIRLVELVLRCVICGLGVLAAVLVGTDTQVREIFS 61
           SYLGVGVSPGNVPVYH T +KV+DR+I++ ELVLRCVI GLGVLAAVLVGTD++V+E FS
Sbjct: 3   SYLGVGVSPGNVPVYHSTNVKVLDRKIKITELVLRCVILGLGVLAAVLVGTDSEVKEFFS 62

Query: 62  IQKKAKFTDMKALVFLVVANGIAAAYSLVQGVRCTVAMLKGSVLFNKPLAWAIFSGDQMM 121
            QK+AKFTDMK+LVFLVVANG+AA YSL+QG+RC ++M++G VLF+KPLAWAIFSGDQ+M
Sbjct: 63  FQKEAKFTDMKSLVFLVVANGLAAGYSLIQGLRCILSMIRGRVLFSKPLAWAIFSGDQVM 122

Query: 122 AYLTVAAVAAAAQSAVFAKLGQPELQWLKICNMYGKFCNQVGEGIASALLVSISMVVLSC 181
           AY+TV A+AAA QS + A++GQPELQW+KICNMYGKFCNQVGEGIASA + S+SMVV+SC
Sbjct: 123 AYVTVVALAAAGQSGMIARVGQPELQWMKICNMYGKFCNQVGEGIASAFVASLSMVVMSC 182

Query: 182 ISAFSLFRLYGGSKAKN 198
           ISAFSLFRLYGG+K KN
Sbjct: 183 ISAFSLFRLYGGNKTKN 199

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|444436411|gb|AGE09573.1| UPF-like protein [Eucalyptus cladocalyx]

 Score =  314 bits (805), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 164/203 (80%), Positives = 182/203 (89%), Gaps = 1/203 (0%)

Query: 1   MSYLGVGVSPGNVPVYHGTVMKVVDRRIRLVELVLRCVICGLGVLAAVLVGTDTQVREIF 60
           MSYLGVGVSPGNVPVYH T +KVVDRR+RL ELVLR VICGLGVL AVLVGTDTQVREIF
Sbjct: 1   MSYLGVGVSPGNVPVYHETSLKVVDRRVRLAELVLRFVICGLGVLTAVLVGTDTQVREIF 60

Query: 61  SIQKKAKFTDMKALVFLVVANGIAAAYSLVQGVRCTVAMLKGSVLFNKPLAWAIFSGDQM 120
           +IQKKAKFTDMKALVFLV+ NGIAA+YSL+Q +RC V+M++GSVLF+KPLAWAIFSGDQ+
Sbjct: 61  TIQKKAKFTDMKALVFLVIVNGIAASYSLIQALRCVVSMVRGSVLFSKPLAWAIFSGDQV 120

Query: 121 MAYLTVAAVAAAAQSAVFAKLGQPELQWLKICNMYGKFCNQVGEGIASALLVSISMVVLS 180
           MAY+T+AAVAA+AQSAV AKLGQPELQW+KIC MY KFCNQVGEGI SALLVSI MV LS
Sbjct: 121 MAYVTLAAVAASAQSAVIAKLGQPELQWMKICGMYEKFCNQVGEGIVSALLVSIGMVALS 180

Query: 181 CISAFSLFRLYGGS-KAKNGARW 202
            ISAF LFRLY GS K K+ + W
Sbjct: 181 VISAFGLFRLYNGSNKGKSNSGW 203

Source: Eucalyptus cladocalyx

Species: Eucalyptus cladocalyx

Genus: Eucalyptus

Family: Myrtaceae

Order: Myrtales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357448001|ref|XP_003594276.1| hypothetical protein MTR_2g026530 [Medicago truncatula] gi|355483324|gb|AES64527.1| hypothetical protein MTR_2g026530 [Medicago truncatula] gi|388519873|gb|AFK47998.1| unknown [Medicago truncatula]

 Score =  313 bits (803), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 164/202 (81%), Positives = 183/202 (90%), Gaps = 1/202 (0%)

Query: 1   MSYLGVGVSPGNVPVYHGTVMKVVDRRIRLVELVLRCVICGLGVLAAVLVGTDTQVREIF 60
           MSYLGVGVSPG VPVYH T MKV+DRR+R+ ELVLR V  GLGVLA VL+ TD+QVRE F
Sbjct: 1   MSYLGVGVSPGTVPVYHSTNMKVLDRRVRITELVLRFVNLGLGVLAVVLIVTDSQVREFF 60

Query: 61  SIQKKAKFTDMKALVFLVVANGIAAAYSLVQGVRCTVAMLKGSVLFNKPLAWAIFSGDQM 120
           +IQKKAKFTDMKALVFLVVAN IAA YSL+QG+RC V+M+KGSVLFNKPLAWAIFS DQ+
Sbjct: 61  TIQKKAKFTDMKALVFLVVANAIAAGYSLIQGLRCVVSMIKGSVLFNKPLAWAIFSCDQV 120

Query: 121 MAYLTVAAVAAAAQSAVFAKLGQPELQWLKICNMYGKFCNQVGEGIASALLVSISMVVLS 180
           MAY+TVAAV+AAAQSAVFAK+GQ +LQW+KICNMYGKFCNQVGEG+ASA LVS+SMVV+S
Sbjct: 121 MAYITVAAVSAAAQSAVFAKMGQEQLQWMKICNMYGKFCNQVGEGLASAFLVSLSMVVVS 180

Query: 181 CISAFSLFRLYGGSKAKNGARW 202
           CISAFSLFRLYGGSK KN A W
Sbjct: 181 CISAFSLFRLYGGSKIKN-AYW 201

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|341958528|sp|E4MWF4.1|CSPL1_THEHA RecName: Full=CASP-like protein 1 gi|312282143|dbj|BAJ33937.1| unnamed protein product [Thellungiella halophila]

 Score =  293 bits (749), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 150/202 (74%), Positives = 178/202 (88%), Gaps = 3/202 (1%)

Query: 1   MSYLGVGVSPGNVPVYHGTVMKVVDRRIRLVELVLRCVICGLGVLAAVLVGTDTQVREIF 60
           MSYLGVG+SP NV    GT MK++DR++RL EL+LRC +C L ++AA+L+ TDTQV+EIF
Sbjct: 1   MSYLGVGLSPVNVA---GTKMKLMDRKVRLTELILRCSVCALALVAAILIATDTQVKEIF 57

Query: 61  SIQKKAKFTDMKALVFLVVANGIAAAYSLVQGVRCTVAMLKGSVLFNKPLAWAIFSGDQM 120
           +IQKKAK+TDMKALVFLVV NGIAAAYSL+  VRC V M+KGSVLF+KPLAWAIFSGDQ 
Sbjct: 58  TIQKKAKYTDMKALVFLVVVNGIAAAYSLLHMVRCVVGMMKGSVLFSKPLAWAIFSGDQA 117

Query: 121 MAYLTVAAVAAAAQSAVFAKLGQPELQWLKICNMYGKFCNQVGEGIASALLVSISMVVLS 180
           +AYLTVA VAAAAQSA FAKLG+PELQW+KIC +YGKFCNQVGEGIA+ALL SI MV++S
Sbjct: 118 IAYLTVAGVAAAAQSAAFAKLGEPELQWMKICTIYGKFCNQVGEGIATALLASIGMVLIS 177

Query: 181 CISAFSLFRLYGGSKAKNGARW 202
            ISAF+LFRLYGG+KA+ G+RW
Sbjct: 178 SISAFALFRLYGGNKAQQGSRW 199

Source: Thellungiella halophila

Species: Eutrema halophilum

Genus: Eutrema

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356562501|ref|XP_003549509.1| PREDICTED: CASP-like protein GSVIVT00013502001-like [Glycine max]

 Score =  290 bits (742), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 149/197 (75%), Positives = 174/197 (88%)

Query: 1   MSYLGVGVSPGNVPVYHGTVMKVVDRRIRLVELVLRCVICGLGVLAAVLVGTDTQVREIF 60
           MSYLG+GVSPG VPVYHGT +KV+DRR+R+ ELVLRCV  GLGV+A VLV TD+QV+E F
Sbjct: 1   MSYLGLGVSPGTVPVYHGTKLKVLDRRVRITELVLRCVSLGLGVVAIVLVVTDSQVKEFF 60

Query: 61  SIQKKAKFTDMKALVFLVVANGIAAAYSLVQGVRCTVAMLKGSVLFNKPLAWAIFSGDQM 120
           S QKKAKFTDMKALVFLVVANG+   YSL+QG+RC V+M++G+VLF+KPLAW IFSGDQ+
Sbjct: 61  SFQKKAKFTDMKALVFLVVANGLTVGYSLIQGLRCVVSMVRGNVLFSKPLAWLIFSGDQV 120

Query: 121 MAYLTVAAVAAAAQSAVFAKLGQPELQWLKICNMYGKFCNQVGEGIASALLVSISMVVLS 180
           MAY+TVAAVAAA QS V  + GQ ELQW+K+CNMYGKFCNQ+GEGIASA +VS+SMVVLS
Sbjct: 121 MAYVTVAAVAAALQSGVLGRTGQAELQWMKVCNMYGKFCNQMGEGIASAFVVSLSMVVLS 180

Query: 181 CISAFSLFRLYGGSKAK 197
           CISAFSLFRLYG +K K
Sbjct: 181 CISAFSLFRLYGTNKNK 197

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	202
TAIR|locus:2058744	201	AT2G35760 "AT2G35760" [Arabido	0.995	1.0	0.668	2.1e-70
TAIR|locus:505006479	182	AT4G16442 "AT4G16442" [Arabido	0.900	1.0	0.593	2.3e-55
TAIR|locus:2117502	175	AT4G25830 "AT4G25830" [Arabido	0.787	0.908	0.347	2.5e-17
TAIR|locus:2020297	204	AT1G17200 "AT1G17200" [Arabido	0.757	0.75	0.310	1.4e-14
TAIR|locus:2130479	193	AT4G15610 "AT4G15610" [Arabido	0.782	0.818	0.315	3.8e-14
TAIR|locus:2130509	190	AT4G15630 "AT4G15630" [Arabido	0.757	0.805	0.269	1.5e-12
TAIR|locus:2150986	187	CASP5 "Casparian strip membran	0.811	0.877	0.242	6.4e-12
TAIR|locus:2091045	178	AT3G14380 "AT3G14380" [Arabido	0.782	0.887	0.259	1.7e-11
TAIR|locus:2081091	199	AT3G06390 "AT3G06390" [Arabido	0.772	0.783	0.262	3.5e-11
UNIPROTKB|A2Y2B7	162	BLE3 "CASP-like protein BLE3"	0.698	0.870	0.276	6.6e-10

TAIR|locus:2058744 AT2G35760 "AT2G35760" [Arabidopsis thaliana (taxid:3702)]

 Score = 713 (256.0 bits), Expect = 2.1e-70, P = 2.1e-70
 Identities = 135/202 (66%), Positives = 159/202 (78%)

Query:     1 MSYLGVGVSPGNVPVYHGTVMKVVDRRIRLVELVLRCVICGLGVLAAVLVGTDTQVREIF 60
             MSYLGVGVSPGNV     T MK++DR++R+ EL+LRC++C L ++AA+L+ TD QVREIF
Sbjct:     1 MSYLGVGVSPGNVSG-STTKMKLIDRKVRVTELILRCLVCVLALVAAILIATDVQVREIF 59

Query:    61 SIQKKAKFTDMKALVFLVVANGIAAAYSLVQGVRCTVAMLKGSVLFNKPLAWAIFSGDQM 120
              IQKKAKFTDMKALV LVV NGIAA YSLVQ VRC V ++KG VLF+KPLAWAIF GDQ 
Sbjct:    60 MIQKKAKFTDMKALVLLVVVNGIAAGYSLVQAVRCVVGLMKGRVLFSKPLAWAIFFGDQA 119

Query:   121 MAYLTXXXXXXXXXXXXXXKLGQPELQWLKICNMYGKFCNQVGEGIASALLVSISMVVLS 180
             +AYL               KLG+PELQW+KICNMYGKFCNQVGEGIASAL   I MV++S
Sbjct:   120 VAYLCVAGVAAAAQSAAFAKLGEPELQWMKICNMYGKFCNQVGEGIASALFACIGMVLIS 179

Query:   181 CISAFSLFRLYGGSKAKNGARW 202
             CISAF +FRLYGGSK++  +RW
Sbjct:   180 CISAFGVFRLYGGSKSRPSSRW 201

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009741 "response to brassinosteroid stimulus" evidence=RCA

GO:0015996 "chlorophyll catabolic process" evidence=RCA

TAIR|locus:505006479 AT4G16442 "AT4G16442" [Arabidopsis thaliana (taxid:3702)]

 Score = 571 (206.1 bits), Expect = 2.3e-55, P = 2.3e-55
 Identities = 108/182 (59%), Positives = 136/182 (74%)

Query:    21 MKVVDRRIRLVELVLRCVICGLGVLAAVLVGTDTQVREIFSIQKKAKFTDMKALVFLVVA 80
             MK++DRR+RL EL+LRC I    +LA +LV TDT+V+ IF+I+K AK+TDMKA+VFLVVA
Sbjct:     1 MKLIDRRMRLTELLLRCSISVFALLALILVVTDTEVKLIFTIKKTAKYTDMKAVVFLVVA 60

Query:    81 NGIAAAYSLVQGVRCTVAMLKGSVLFNKPLAWAIFSGDQMMAYLTXXXXXXXXXXXXXXK 140
             NGIAA YSL+Q VRC V  +KG VLF+KPLAWA FSGDQ MAYL               +
Sbjct:    61 NGIAAVYSLLQSVRCVVGTMKGKVLFSKPLAWAFFSGDQAMAYLNVAAIAATAESGVIAR 120

Query:   141 LGQPELQWLKICNMYGKFCNQVGEGIASALLVSISMVVLSCISAFSLFRLYGGSKAKNGA 200
              G+ +LQW+++C MYGKFCNQ+  G++SALL SI+MV +SCISAFSLFRLYG +K +   
Sbjct:   121 EGEEDLQWMRVCTMYGKFCNQMAIGVSSALLASIAMVFVSCISAFSLFRLYGATKDRRTT 180

Query:   201 RW 202
              W
Sbjct:   181 PW 182

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2117502 AT4G25830 "AT4G25830" [Arabidopsis thaliana (taxid:3702)]

 Score = 212 (79.7 bits), Expect = 2.5e-17, P = 2.5e-17
 Identities = 58/167 (34%), Positives = 85/167 (50%)

Query:    27 RIRLVELVLR-CVICGLGVLAAVLVGTDTQVREIFSIQKKAKFTDMKALVFLVVANGIAA 85
             ++R  E++LR C++  L +L + L+G D+Q +EI  I K   F  + AL   +  + + A
Sbjct:     3 KLRETEVILRLCIVFFL-LLTSCLIGLDSQTKEIAYIHKNVSFRYLLALEAELYIDVVVA 61

Query:    86 AYSLVQ-GVRCTVAMLKGSVLFNKPLAWAIFSGDQMMAYLTXXXXXXXXXXXXXXKLGQP 144
             AY+LVQ G+       K S     P  W  +  DQ  AY+                 G  
Sbjct:    62 AYNLVQLGLGWYNVEQKTS----NP-KWFSYLLDQTAAYVVFAGTSAAAQHSLLVVTGSR 116

Query:   145 ELQWLKICNMYGKFCNQVGEGIASALLVSISMVVLSCISAFSLFRLY 191
             ELQW+K C  + +FC Q+G  I    + +  MV+LS ISAF+LFRLY
Sbjct:   117 ELQWMKWCYKFTRFCFQMGSAIILNYIAAALMVLLSSISAFNLFRLY 163

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0005747 "mitochondrial respiratory chain complex I" evidence=IBA

GO:0008137 "NADH dehydrogenase (ubiquinone) activity" evidence=IBA

GO:0008150 "biological_process" evidence=ND

GO:0045333 "cellular respiration" evidence=IBA

TAIR|locus:2020297 AT1G17200 "AT1G17200" [Arabidopsis thaliana (taxid:3702)]

 Score = 186 (70.5 bits), Expect = 1.4e-14, P = 1.4e-14
 Identities = 50/161 (31%), Positives = 72/161 (44%)

Query:    28 IRLVELVLRCVICGLGVLAAVLVGTDTQVREIFSIQKKAKFTDMKALVFLVVANGIAAAY 87
             IR  E +LR    GL V A V++  D++  E  SI     ++++ A  +LV ANGI A Y
Sbjct:    30 IRTAETMLRLAPVGLCVAALVVMLKDSETNEFGSIS----YSNLTAFRYLVHANGICAGY 85

Query:    88 SLVQGVRCTVAMLKGSVLFNKPLAWAIFSGDQMMAYLTXXXXXXXXXXXXXXKLGQPELQ 147
             SL+       AM + S     P  W  F  DQ++ YL                 G   + 
Sbjct:    86 SLLSAA--IAAMPRSSSTM--PRVWTFFCLDQLLTYLVLAAGAVSAEVLYLAYNGDSAIT 141

Query:   148 WLKICNMYGKFCNQVGEGIASALLVSISMVVLSCISAFSLF 188
             W   C+ YG FC++    +     V    +VLS IS++ LF
Sbjct:   142 WSDACSSYGGFCHRATASVIITFFVVCFYIVLSLISSYKLF 182

GO:0005515 "protein binding" evidence=IPI

GO:0080167 "response to karrikin" evidence=IEP

GO:0006949 "syncytium formation" evidence=RCA

TAIR|locus:2130479 AT4G15610 "AT4G15610" [Arabidopsis thaliana (taxid:3702)]

 Score = 182 (69.1 bits), Expect = 3.8e-14, P = 3.8e-14
 Identities = 52/165 (31%), Positives = 81/165 (49%)

Query:    30 LVELVLRCVICGLGVLAAVLVGTDTQVREIF----SIQ-KKAKFTDMKALVFLVVANGIA 84
             + ++VLR V+    + + V++ T  Q + IF     I+   A+FT+  AL++ VVA  +A
Sbjct:    28 MTQVVLRFVLFAATLTSIVVMVTSKQTKNIFLPGTPIRIPAAEFTNSPALIYFVVALSVA 87

Query:    85 AAYSLVQGVRCTVAMLKGSVLFNKPLAWAIFSGDQMMAYLTXXXXXXXXXXXXXXKLGQP 144
               YS+V       A  K S      L  AI   D +M  +                 G  
Sbjct:    88 CFYSIVSTFVTVSAFKKHSCSAVLLLNLAIM--DAVMVGIVASATGAGGGVAYLGLKGNK 145

Query:   145 ELQWLKICNMYGKFCNQVGEGIASALLVSISMVVLSCISAFSLFR 189
             E++W KIC++Y KFC  VG  IA +L  S+ +++LS IS  SL++
Sbjct:   146 EVRWGKICHIYDKFCRHVGGAIAVSLFASVVLLLLSIISVLSLYK 190

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006865 "amino acid transport" evidence=RCA

GO:0009407 "toxin catabolic process" evidence=RCA

GO:0010167 "response to nitrate" evidence=RCA

GO:0010583 "response to cyclopentenone" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

TAIR|locus:2130509 AT4G15630 "AT4G15630" [Arabidopsis thaliana (taxid:3702)]

 Score = 167 (63.8 bits), Expect = 1.5e-12, P = 1.5e-12
 Identities = 45/167 (26%), Positives = 76/167 (45%)

Query:    31 VELVLRCVICGLGVLAAVLVGTDTQVREI----------FSIQKKAKFTDMKALVFLVVA 80
             +EL +R +   L ++AA ++G   Q + +           ++   AK + + A V+ + A
Sbjct:    27 LELTMRVLALVLTMVAATVLGVAKQTKVVPIKLIPTLPPLNVSTTAKASYLSAFVYNISA 86

Query:    81 NGIAAAYSLVQGVRCTVAMLKGSVLFNKPLAWAIFSGDQMMAYLTXXXXXXXXXXXXXXK 140
             N IA  Y+ +  V   V + KG    +K L  A+  GD MM  L               +
Sbjct:    87 NAIACGYTAISIV--IVMISKGKR--SKSLLMAVLIGDLMMVALLFSSTGAAGAIGLMGR 142

Query:   141 LGQPELQWLKICNMYGKFCNQVGEGIASALLVSISMVVLSCISAFSL 187
              G   + W K+C ++GKFCNQ    +A  L+ S+  ++L  + A  L
Sbjct:   143 HGNKHVMWKKVCGVFGKFCNQAAVSVAITLIASVVFMLLVVLDALKL 189

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0043424 "protein histidine kinase binding" evidence=IPI

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2150986 CASP5 "Casparian strip membrane domain protein 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 161 (61.7 bits), Expect = 6.4e-12, P = 6.4e-12
 Identities = 41/169 (24%), Positives = 78/169 (46%)

Query:    23 VVDRRIRLVELVLRCVICGLGVLAAVLVGTDTQVREIFS--IQKKAKFTDMKALVFLVVA 80
             ++ RRI ++E +LR V     + +A+L+GT  +    F+  I+ +A++ D+ AL F VVA
Sbjct:    20 LMSRRIAILEFILRIVAFFNTIGSAILMGTTHETLPFFTQFIRFQAEYNDLPALTFFVVA 79

Query:    81 NGIAAAYSLVQGVRCTVAMLKGSVLFNKPLAWAIFSGDQMMAYLTXXXXXXXXXXXXXXK 140
             N + + Y ++      V ++K      + L   I     M+  LT               
Sbjct:    80 NAVVSGYLILSLTLAFVHIVKRKTQNTRILL--IILDVAMLGLLTSGASSAAAIVYLAHN 137

Query:   141 LGQPELQWLKICNMYGKFCNQVGEGIASALLVSISMVVLSCISAFSLFR 189
              G  +  W  IC  +  FC ++   +  + +  + +++L  +SA +L R
Sbjct:   138 -GNNKTNWFAICQQFNSFCERISGSLIGSFIAIVLLILLILLSAIALSR 185

GO:0005739 "mitochondrion" evidence=ISM

GO:0005515 "protein binding" evidence=IPI

GO:0007043 "cell-cell junction assembly" evidence=IDA

GO:0042545 "cell wall modification" evidence=IMP

GO:0042803 "protein homodimerization activity" evidence=ISS

GO:0048226 "Casparian strip" evidence=IDA

TAIR|locus:2091045 AT3G14380 "AT3G14380" [Arabidopsis thaliana (taxid:3702)]

 Score = 157 (60.3 bits), Expect = 1.7e-11, P = 1.7e-11
 Identities = 43/166 (25%), Positives = 77/166 (46%)

Query:    23 VVDRRIRLVELVLRCVICGLGVLAAVLVGTDTQVREIFSIQKKAKFTDMKALVFLVVANG 82
             V++R  +  E VLR     L +   V++  ++   E  S+     ++++ A ++LV ANG
Sbjct:    15 VLNRTEKSAEAVLRVASMALSITGLVIMIKNSISNEFGSVS----YSNIGAFMYLVSANG 70

Query:    83 IAAAYSLVQGVRCTVAMLKGSVLFNKPLAWAIFSGDQMMAYLTXXXXXXXXXXXXXXKLG 142
             + AAYSL+  +    A+L      +K     +F  DQ++ Y+                 G
Sbjct:    71 VCAAYSLLSAL----AILALPCPISKVQVRTLFLLDQVVTYVVLAAGAVSAETVYLAYYG 126

Query:   143 QPELQWLKICNMYGKFCNQVGEGIASALLVSISMVVLSCISAFSLF 188
                + W   C+ YG FC+     +    +VS+  ++LS IS++ LF
Sbjct:   127 NIPITWSSACDSYGSFCHNALISVVFTFVVSLLYMLLSLISSYRLF 172

GO:0016020 "membrane" evidence=ISS

GO:0010227 "floral organ abscission" evidence=IEP

TAIR|locus:2081091 AT3G06390 "AT3G06390" [Arabidopsis thaliana (taxid:3702)]

 Score = 154 (59.3 bits), Expect = 3.5e-11, P = 3.5e-11
 Identities = 43/164 (26%), Positives = 78/164 (47%)

Query:    29 RLVELVLRCVICGLGVLAA-VLVGTD-TQVREIFSIQK----KAKFTDMKALVFLVVANG 82
             R ++++ R ++    + A  V+V +D T++ ++  +       A+F D  A ++ VVA  
Sbjct:    35 RKIDIITRVLLFSATLTALIVMVTSDQTEMTQLPGVSSPAPVSAEFNDSPAFIYFVVALV 94

Query:    83 IAAAYSLVQGVRCTVAMLKGSVLFNKPLAWAIFSGDQMMAYLTXXXXXXXXXXXXXXKLG 142
             +A+ Y+L+  +     +LK    F    +  + S D +M  +                 G
Sbjct:    95 VASFYALISTLVSISLLLKPE--FTAQFSIYLASLDMVMLGILASATGTAGGVAYIALKG 152

Query:   143 QPELQWLKICNMYGKFCNQVGEGIASALLVSISMVVLSCISAFS 186
               E+ W KICN+Y KFC  +   +A +L  S+ ++VLS  SA S
Sbjct:   153 NEEVGWNKICNVYDKFCRYIATSLALSLFASLLLLVLSIWSALS 196

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|A2Y2B7 BLE3 "CASP-like protein BLE3" [Oryza sativa Indica Group (taxid:39946)]

 Score = 142 (55.0 bits), Expect = 6.6e-10, P = 6.6e-10
 Identities = 42/152 (27%), Positives = 66/152 (43%)

Query:    29 RLVELVLRCVICGLGVLAAVLVGTDTQVREIFSIQKKAKFTDMKALVFLVVANGIAAAYS 88
             RL+  VLR         AAV++ T  +    F IQ +AK++   + +F VVA  +AAAYS
Sbjct:     6 RLMNAVLRLAAAAAAATAAVVMVTSRETTSFFGIQMEAKYSYTPSFIFFVVAYAVAAAYS 65

Query:    89 LVQGVRCTVAMLKGSVLFNKPLAWAIFSGDQMMAYLTXXXXXXXXXXXXXXKLGQPELQW 148
             L+      +A+  GS L    L     + D ++  +               K G     W
Sbjct:    66 LL-----VLAVPAGSALSRLAL-----TTDVVLGMVLAGAVASAGAISDIAKNGNSHAGW 115

Query:   149 LKICNMYGKFCNQVGEG-IASALLVSISMVVL 179
             L +C     +CN V    IA  + +++  VV+
Sbjct:   116 LPVCGQIHAYCNHVMAALIAGFVALAVHFVVV 147

GO:0009733 "response to auxin stimulus" evidence=ISS

GO:0009741 "response to brassinosteroid stimulus" evidence=ISS

GO:0009826 "unidimensional cell growth" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q10QH3	CSPLL_ORYSJ	No assigned EC number	0.4873	0.8415	0.8717	yes	no
B9HD38	CSPLE_POPTR	No assigned EC number	0.8762	1.0	1.0	yes	no
C5WUP3	CSPL4_SORBI	No assigned EC number	0.5487	0.9455	0.9182	N/A	no
D7M9V1	CSPL7_ARALL	No assigned EC number	0.6428	0.9009	1.0	N/A	no
A7R385	CSPLC_VITVI	No assigned EC number	0.8267	1.0	1.0	yes	no
B6TGJ8	CSPL8_MAIZE	No assigned EC number	0.5113	0.8217	0.8736	N/A	no
B9IH36	CSPLJ_POPTR	No assigned EC number	0.8762	1.0	1.0	no	no
D7LIK3	CSPL3_ARALL	No assigned EC number	0.7178	0.9950	1.0	N/A	no
Q8L924	CSPL7_ARATH	No assigned EC number	0.7277	0.9950	1.0	yes	no
B9SA89	CSPLB_RICCO	No assigned EC number	0.8712	1.0	1.0	N/A	no
E4MWF4	CSPL1_THEHA	No assigned EC number	0.7425	0.9851	1.0	N/A	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_fgenesh4_pg.C_LG_VI0152 hypothetical protein (203 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	202
TIGR01569	154	TIGR01569, A_tha_TIGR01569, plant integral membran	4e-44
pfam04535	150	pfam04535, DUF588, Domain of unknown function (DUF	1e-41

>gnl|CDD|233471 TIGR01569, A_tha_TIGR01569, plant integral membrane protein TIGR01569

 Score =  144 bits (364), Expect = 4e-44
 Identities = 62/157 (39%), Positives = 91/157 (57%), Gaps = 5/157 (3%)

Query: 33  LVLRCVICGLGVLAAVLVGTDTQVREIFS--IQKKAKFTDMKALVFLVVANGIAAAYSLV 90
           L+LR +     + AA+++GT+ + + +F   I  KAKF+D+ A V+ VVAN IA  YSL+
Sbjct: 1   LILRVLAFSATLAAAIVMGTNRETKVVFVQLITFKAKFSDLPAFVYFVVANAIACGYSLL 60

Query: 91  QGVRCTVAMLKGSVLFNKPLAWAIFSGDQMMAYLTVAAVAAAAQSAVFAKLGQPELQWLK 150
             V     +LK  V F      A+F  D +M  L  +  +AAA  A   KLG  E  WLK
Sbjct: 61  SLVVSIFGLLKRRVFF---KLIALFFLDLVMLALLSSGTSAAAAVAYVGKLGNKEAGWLK 117

Query: 151 ICNMYGKFCNQVGEGIASALLVSISMVVLSCISAFSL 187
           IC ++GKFC+++   +A +L   I +V+LS +SA SL
Sbjct: 118 ICGVFGKFCDRIAGSLALSLFAVILLVLLSILSAISL 154

This model describes a region of ~160 residues found exclusively in plant proteins, generally as the near complete length of the protein. At least 24 different members are found in Arabidopsis thaliana. Members have four predicted transmembrane regions, the last of which is preceded by an invariant CXXXXX[FY]C motif. The family is not functionally characterized. Length = 154

>gnl|CDD|218134 pfam04535, DUF588, Domain of unknown function (DUF588)

 Score =  137 bits (347), Expect = 1e-41
 Identities = 66/150 (44%), Positives = 90/150 (60%), Gaps = 1/150 (0%)

Query: 25  DRRIRLVELVLRCVICGLGVLAAVLVGTDTQVREIFSIQKKAKFTDMKALVFLVVANGIA 84
            R +RL ELVLR     L + AAV++GT+ Q +  F IQKKA F+D+ A  +LVVAN IA
Sbjct: 1   GRPLRLAELVLRLAAFVLALAAAVVMGTNKQTKPFFFIQKKASFSDLPAFRYLVVANAIA 60

Query: 85  AAYSLVQGVRCTVAMLKGSVLFNKPLAWAIFSGDQMMAYLTVAAVAAAAQSAVFAKLGQP 144
           A YSL+Q V     + +      K LAW +F  DQ+MAYL +AA +AAA     A+ G  
Sbjct: 61  AGYSLLQLVLSVYLLSRKK-PRTKGLAWLLFILDQVMAYLLLAAASAAAAIVYLARNGNS 119

Query: 145 ELQWLKICNMYGKFCNQVGEGIASALLVSI 174
              W+KICN +G+FCN+    +A + L  +
Sbjct: 120 HANWMKICNQFGRFCNRAAASVALSFLAFL 149

This family of plant proteins contains a domain that may have a catalytic activity. It has a conserved arginine and aspartate that could form an active site. These proteins are predicted to contain 3 or 4 transmembrane helices. Length = 150

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	202
TIGR01569	154	A_tha_TIGR01569 plant integral membrane protein TI	100.0
PF04535	149	DUF588: Domain of unknown function (DUF588); Inter	100.0
PF01284	144	MARVEL: Membrane-associating domain; InterPro: IPR	98.67

>TIGR01569 A_tha_TIGR01569 plant integral membrane protein TIGR01569

Probab=100.00  E-value=1.6e-44  Score=290.90  Aligned_cols=152  Identities=40%  Similarity=0.623  Sum_probs=144.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHhcCcceeEee--eeceeeecchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCCchh
Q 028855           33 LVLRCVICGLGVLAAVLVGTDTQVREIFS--IQKKAKFTDMKALVFLVVANGIAAAYSLVQGVRCTVAMLKGSVLFNKPL  110 (202)
Q Consensus        33 l~LR~~a~~~sl~a~~vM~t~~qt~~~~~--~~~~a~fs~~~af~ylv~an~I~~~Ysllql~~~~~~l~~~~~~~~~~~  110 (202)
                      ++||+++++++++|+++|+||+|+.+++.  +++++||+|+++|+|+|++|+|+|+|+++|++++++.+.+++..   ..
T Consensus         1 l~LR~~~~~~sl~A~vvm~t~~qt~~~~~~~~~~~a~f~d~~af~y~v~anai~~~Ysll~l~~~~~~~~~~~~~---~~   77 (154)
T TIGR01569         1 LILRVLAFSATLAAAIVMGTNRETKVVFVQLITFKAKFSDLPAFVYFVVANAIACGYSLLSLVVSIFGLLKRRVF---FK   77 (154)
T ss_pred             CcHHHHHHHHHHHHHHHhhcccceeeeecccceeeeeeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccch---hH
Confidence            47999999999999999999999999887  89999999999999999999999999999999999887776653   34


Q ss_pred             HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCcchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 028855          111 AWAIFSGDQMMAYLTVAAVAAAAQSAVFAKLGQPELQWLKICNMYGKFCNQVGEGIASALLVSISMVVLSCISAFSL  187 (202)
Q Consensus       111 ~~~~f~~Dqv~ayLL~SaasAA~av~~l~~~G~~~~~W~~vC~~~~~FC~~~~~Sv~lsf~A~~~~~~~s~lSa~~L  187 (202)
                      .|++|++||+++||++||++||+++++++|+||+|.+|+++|+++++||+|+.+|++++|+|++++++++++|++++
T Consensus        78 ~~~~f~~D~v~~~Ll~sa~sAA~av~~l~~~G~~~~~W~~iC~~~~~FC~~~~~sl~~s~~a~v~~~llsv~Sa~~~  154 (154)
T TIGR01569        78 LIALFFLDLVMLALLSSGTSAAAAVAYVGKLGNKEAGWLKICGVFGKFCDRIAGSLALSLFAVILLVLLSILSAISL  154 (154)
T ss_pred             HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            79999999999999999999999999999999999999999999999999999999999999999999999999975

This model describes a region of ~160 residues found exclusively in plant proteins, generally as the near complete length of the protein. At least 24 different members are found in Arabidopsis thaliana. Members have four predicted transmembrane regions, the last of which is preceded by an invariant CXXXXX[FY]C motif. The family is not functionally characterized.

>PF04535 DUF588: Domain of unknown function (DUF588); InterPro: IPR006702 This family of plant proteins contains a domain that may have a catalytic activity

Probab=100.00  E-value=1.6e-40  Score=265.45  Aligned_cols=149  Identities=40%  Similarity=0.638  Sum_probs=142.0

Q ss_pred             hhhhhhhhHHHHHHHHHHHHHHHHHHhcCcceeEeeeeceeeecchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcC
Q 028855           26 RRIRLVELVLRCVICGLGVLAAVLVGTDTQVREIFSIQKKAKFTDMKALVFLVVANGIAAAYSLVQGVRCTVAMLKGSVL  105 (202)
Q Consensus        26 ~~~~~~~l~LR~~a~~~sl~a~~vM~t~~qt~~~~~~~~~a~fs~~~af~ylv~an~I~~~Ysllql~~~~~~l~~~~~~  105 (202)
                      |+.+..+++||+++++++++|+++|++|+||.++..++.+++|+|+++|+|+|++|+|+|+|+++|++.+++.+.+|+ .
T Consensus         1 ~~~~~~~l~LR~~~~~~sl~a~~vm~t~~qt~~~~~~~~~~~f~~~~af~ylv~a~~i~~~Ysl~~~~~~~~~~~~~~-~   79 (149)
T PF04535_consen    1 RSLRIASLVLRLLAFVLSLAALAVMATNKQTVSVFSIQFTAKFSDYPAFRYLVAANVIACVYSLLQLVLSIYSLSRGK-L   79 (149)
T ss_pred             CCchhhhHHHHHHHHHHHHHHHHHHHhcCCcceeeccccceeecccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC-C
Confidence            456889999999999999999999999999999988999999999999999999999999999999999999888777 5


Q ss_pred             CCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCcchhhhhhhhhhhhhhhHHHHHHHHHHHHHH
Q 028855          106 FNKPLAWAIFSGDQMMAYLTVAAVAAAAQSAVFAKLGQPELQWLKICNMYGKFCNQVGEGIASALLVSIS  175 (202)
Q Consensus       106 ~~~~~~~~~f~~Dqv~ayLL~SaasAA~av~~l~~~G~~~~~W~~vC~~~~~FC~~~~~Sv~lsf~A~~~  175 (202)
                      +++...|++|++||+++||++||++||+++++++++||++.+|+++|+.+++||+|+++|++++|+|+++
T Consensus        80 ~~~~~~~~~f~~Dqv~~~ll~sa~~Aa~~~~~~~~~g~~~~~W~~vC~~~~~FC~~~~~sv~lsf~a~~~  149 (149)
T PF04535_consen   80 RSKLLAWFLFILDQVLAYLLFSAASAAAAVAYLGKKGNSHVQWSKVCSQFGKFCNRAAASVALSFLAFVA  149 (149)
T ss_pred             cccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhhccchhhHHHHHHHHHHHHHHHHHC
Confidence            6678899999999999999999999999999999999999999999999999999999999999999874

It has a conserved arginine and aspartate that could form an active site. These proteins are predicted to contain 3 or 4 transmembrane helices.

>PF01284 MARVEL: Membrane-associating domain; InterPro: IPR021128 This entry represents the ~130-residue MARVEL (MAL and related proteins for vesicle trafficking and membrane link) domain

Probab=98.67  E-value=5.9e-07  Score=69.48  Aligned_cols=141  Identities=16%  Similarity=0.018  Sum_probs=101.4

Q ss_pred             hhhhhHHHHHHHHHHHHHHHHHHhcCcceeEeeeeceeeecchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCCc
Q 028855           29 RLVELVLRCVICGLGVLAAVLVGTDTQVREIFSIQKKAKFTDMKALVFLVVANGIAAAYSLVQGVRCTVAMLKGSVLFNK  108 (202)
Q Consensus        29 ~~~~l~LR~~a~~~sl~a~~vM~t~~qt~~~~~~~~~a~fs~~~af~ylv~an~I~~~Ysllql~~~~~~l~~~~~~~~~  108 (202)
                      +....+||+++++++++.+.+++....+...      ......++..|.+.+.++...+++.-++...+.   .+..++.
T Consensus         3 ~s~~~ilR~lq~~~~~i~~~l~~~~~~~~~~------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~---~~~~~~~   73 (144)
T PF01284_consen    3 RSPSGILRILQLVFALIIFGLVASSIATGSQ------IYGGSPSACGFALFVAVLSFLYTLIFLLLYLFS---LKYRPRI   73 (144)
T ss_pred             ccHhHHHHHHHHHHHHHHHHHHHHHHhcccc------ccCCCCcchhHHHHHHHHHHHHHHHHHHHHHHH---Hhccccc
Confidence            3456899999999999999999998743221      255667888999999999999999888876654   1222233


Q ss_pred             hhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCcchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHH
Q 028855          109 PLAWAIFSGDQMMAYLTVAAVAAAAQSAVFAKLGQPELQWLKICNMYGKFCNQVGEGIASALLVSISMVVLSC  181 (202)
Q Consensus       109 ~~~~~~f~~Dqv~ayLL~SaasAA~av~~l~~~G~~~~~W~~vC~~~~~FC~~~~~Sv~lsf~A~~~~~~~s~  181 (202)
                      ...+.+++.|.+++.+-+.+..+-+.-....+.+++   +...+...+.-|+...++.+++|+.++.+..+.+
T Consensus        74 ~~~~~~~~~~~v~~il~l~a~~~~a~~~~~~~~~~~---~~~~~~~~~~~~~~~~Aa~~f~~~~~~l~~~s~~  143 (144)
T PF01284_consen   74 PWPLVEFIFDAVFAILWLAAFIALAAYLSDHSCSNT---GNDYSYSGCSRCGAWKAAAAFGFLNWLLFIVSAV  143 (144)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHHHhcCcccccC---CCCcCCCCCCcchhHHHHHHHHHHHHHHHHHHHH
Confidence            445789999999999988876664433222112211   1223334457799999999999999999988764

The MARVEL domain is a module with a four transmembrane-helix architecture that has been identified in proteins of the myelin and lymphocyte (MAL), physins, gyrins and occludin families. All described MARVEL domain-containing proteins are consistent with the M-shaped topology: four transmembrane-helix region architecture with cytoplasmic N- and C-terminal regions. Their function could be related to cholesterol-rich membrane apposition events in a variety of cellular processes, such as biogenesis of vesicular transport carriers or tight junction regulation [].

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00