Citrus Sinensis ID: 028983

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-
Protein Sequence
MKVDNPSKHKIQQQEEEEEEAEQMCRTIEVASVVDLSPQPAPVVTGDEVTLIPPLNFSMVDNGIFRSGFPDSANFSFLQTLRLRSIIYLCPEPYPEANTEFLKSNGIKLFQFAIEGHKEPFVNIPEDMIREALKVLLDVRNHPVLIHCKRGKHRTGCLVGCLRKLQKWCLSSVFDEYQRFAAAKARVSDQRGTRILSPALE
Secondary Structure (PSIPRED)
cccccccccHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccHHHHHHccccEEEEccccccccHHHHHHHHcccEEEEEEEcccccccccccHHHHHHHHHHHHccccccEEEEEcccccHHHHHHHHHHHHccccHHHHHHHHHHHHcccccHHHHHHHHHcccccc
Secondary Structure Prediction (SSPRO)
ccccccccccHHcHHHHHcccHHHccccEcccccccccccccccccccccccccccccccccccEcccccccccHHHHHHccccEEEEEccccccHHHHHHHHHcccEEEEEEccccccccccccHHHHHHHHHHHHccccccEEEEEccccccccHHHHHHHHHccccHHHHHHHHHHHHccHHcHHHHHHHHHcccccc
Coil and Loop (DISEMBL)
mkvdnpskhkiQQQEEEEEEAEQMCRTIEVASvvdlspqpapvvtgdevtlipplnfsmvdngifrsgfpdsanfsfLQTLRLRSIIylcpepypeantEFLKSNGIKLFQFAIeghkepfvnipEDMIREALKVLLDvrnhpvlihckrgkhrtgclVGCLRKLQKWCLSSVFDEYQRFAAAKArvsdqrgtrilspale
Flexible Loop (DISEMBL)
mkvdnpskhkiqqqeeEEEEAEQMCRTIEVASVVDLSPQPAPVVTGDEVTLIPPLNFSMVDNGIFRSGFPDSANFSFLQTLRLRSIIYLCPEPYPEANTEFLKSNGIKLFQFAIEGHKEPFVNIPEDMIREALKVLLDVRNhpvlihckrgkhrtgCLVGCLRKLQKWCLSSVFDEYQRFAAAkarvsdqrgtrilspale
Low Complexity Region (SEG)
MKVDNPSKHKIqqqeeeeeeaeqMCRTIEVASVVDLSPQPAPVVTGDEVTLIPPLNFSMVDNGIFRSGFPDSANFSFLQTLRLRSIIYLCPEPYPEANTEFLKSNGIKLFQFAIEGHKEPFVNIPEDMIREALKVLLDVRNHPVLIHCKRGKHRTGCLVGCLRKLQKWCLSSVFDEYQRFAAAKARVSDQRGTRILSPALE
Disordered region (IsUnstruct)
*************************RTIEVASVVDLSPQPAPVVTGDEVTLIPPLNFSMVDNGIFRSGFPDSANFSFLQTLRLRSIIYLCPEPYPEANTEFLKSNGIKLFQFAIEGHKEPFVNIPEDMIREALKVLLDVRNHPVLIHCKRGKHRTGCLVGCLRKLQKWCLSSVFDEYQRFAAAK*****************
Disordered Region (DISOPRED)
************************************************VTLIPPLNFSMVDNGIFRSGFPDSANFSFLQTLRLRSIIYLCPEPYPEANTEFLKSNGIKLFQFAIEGHKEPFVNIPEDMIREALKVLLDVRNHPVLIHCKRGKHRTGCLVGCLRKLQKWCLSSVFDEYQRFAAAKARVSDQRGTRILSPA**
Disordered Region (DISEMBL)
************************CRTIEVASVVDLSPQPAPVVTGDEVTLIPPLNFSMVDNGIFRSGFPDSANFSFLQTLRLRSIIYLCPEPYPEANTEFLKSNGIKLFQFAIEGHKEPFVNIPEDMIREALKVLLDVRNHPVLIHCKRGKHRTGCLVGCLRKLQKWCLSSVFDEYQRFAA*********GTRILSPALE
Disordered Region (DISPRO)
****************************E******************EVTLIPPLNFSMVDNGIFRSGFPDSANFSFLQTLRLRSIIYLCPEPYPEANTEFLKSNGIKLFQFAIEGHKEPFVNIPEDMIREALKVLLDVRNHPVLIHCKRGKHRTGCLVGCLRKLQKWCLSSVFDEYQRFAAAKARVSDQRGTRILSPAL*
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MKVDNPSKHKxxxxxxxxxxxxxxxxxxxxxSVVDLSPQPAPVVTGDEVTLIPPLNFSMVDNGIFRSGFPDSANFSFLQTLRLRSIIYLCPEPYPEANTEFLKSNGIKLFQFAIEGHKEPFVNIPEDMIREALKVLLDVRNHPVLIHCKRGKHRTGCLVGCLRKLQKWCLSSVFDEYQRFAAAKARVSDQRGTRILSPALE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	201	2.2.26 [Sep-21-2011]
Q9ZVN4	215	Probable tyrosine-protein	yes	no	0.895	0.837	0.75	1e-77
P53965	281	Tyrosine-protein phosphat	yes	no	0.900	0.644	0.492	5e-46
Q1ZXG8	166	Probable tyrosine-protein	no	no	0.741	0.897	0.409	2e-32
Q4P7L6	158	Putative tyrosine-protein	N/A	no	0.701	0.892	0.387	1e-25
Q6CTE4	210	Putative tyrosine-protein	no	no	0.686	0.657	0.403	2e-24
A5DE24	185	Putative tyrosine-protein	N/A	no	0.731	0.794	0.4	2e-24
Q6BLZ8	196	Putative tyrosine-protein	no	no	0.696	0.714	0.376	6e-24
Q75B37	225	Putative tyrosine-protein	no	no	0.696	0.622	0.403	7e-24
Q9UUF3	287	Probable tyrosine-protein	yes	no	0.681	0.477	0.375	9e-24
Q6C4X9	253	Putative tyrosine-protein	no	no	0.646	0.513	0.383	2e-22

>sp|Q9ZVN4|Y1500_ARATH Probable tyrosine-protein phosphatase At1g05000 OS=Arabidopsis thaliana GN=At1g05000 PE=1 SV=1

 Score =  288 bits (738), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 141/188 (75%), Positives = 156/188 (82%), Gaps = 8/188 (4%)

Query: 17  EEEEAEQMCRTIEVASVVDLSPQPAP--------VVTGDEVTLIPPLNFSMVDNGIFRSG 68
           E++  E  CRTI   S V+ +   AP        VV+G+E+ LIPPLNFSMVDNGIFRSG
Sbjct: 11  EQDNGEDFCRTIIEVSEVNRNVFQAPGGEADPFRVVSGEELHLIPPLNFSMVDNGIFRSG 70

Query: 69  FPDSANFSFLQTLRLRSIIYLCPEPYPEANTEFLKSNGIKLFQFAIEGHKEPFVNIPEDM 128
           FPDSANFSFLQTL LRSIIYLCPEPYPE+N +FLKSNGI+LFQF IEG+KEPFVNIP+  
Sbjct: 71  FPDSANFSFLQTLGLRSIIYLCPEPYPESNLQFLKSNGIRLFQFGIEGNKEPFVNIPDHK 130

Query: 129 IREALKVLLDVRNHPVLIHCKRGKHRTGCLVGCLRKLQKWCLSSVFDEYQRFAAAKARVS 188
           IR ALKVLLD +NHPVLIHCKRGKHRTGCLVGCLRKLQKWCL+S+FDEYQRFAAAKARVS
Sbjct: 131 IRMALKVLLDEKNHPVLIHCKRGKHRTGCLVGCLRKLQKWCLTSIFDEYQRFAAAKARVS 190

Query: 189 DQRGTRIL 196
           DQR   I 
Sbjct: 191 DQRFMEIF 198

Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 4EC: 8

>sp|P53965|SIW14_YEAST Tyrosine-protein phosphatase SIW14 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SIW14 PE=1 SV=1

 Score =  184 bits (466), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 94/191 (49%), Positives = 126/191 (65%), Gaps = 10/191 (5%)

Query: 2   KVDNPSKHKIQQQEEEEEEAEQMCRTIEVASVVDLSPQPAPVVTGDEVTLIPPLNFSMVD 61
           K D P K   + +++  +  E   +TIEV + ++        V   EV  IPP NFS V 
Sbjct: 76  KSDIPRKEFDEDEDDGYDSNEHHQKTIEVMNTLNH-------VINKEV--IPPENFSHVV 126

Query: 62  NGIFRSGFPDSANFSFL-QTLRLRSIIYLCPEPYPEANTEFLKSNGIKLFQFAIEGHKEP 120
             I+RS FP   NFSFL + L+L+SI+ L PE YP+ N  FLK  GIKL+Q  + G+KEP
Sbjct: 127 GEIYRSSFPRQENFSFLHERLKLKSILVLIPEEYPQENLNFLKLTGIKLYQVGMSGNKEP 186

Query: 121 FVNIPEDMIREALKVLLDVRNHPVLIHCKRGKHRTGCLVGCLRKLQKWCLSSVFDEYQRF 180
           FVNIP  ++ +AL+++L+  N P+LIHC RGKHRTGCL+GC+RKLQ W L+ +FDEY+RF
Sbjct: 187 FVNIPSHLLTKALEIVLNPANQPILIHCNRGKHRTGCLIGCIRKLQNWSLTMIFDEYRRF 246

Query: 181 AAAKARVSDQR 191
           A  KAR  DQ+
Sbjct: 247 AFPKARALDQQ 257

Plays a role in actin filament organization and endocytosis.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 4

EC: 8

>sp|Q1ZXG8|D1060_DICDI Probable tyrosine-protein phosphatase DG1060 OS=Dictyostelium discoideum GN=DG1060 PE=3 SV=1

 Score =  138 bits (348), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 61/149 (40%), Positives = 100/149 (67%)

Query: 52  IPPLNFSMVDNGIFRSGFPDSANFSFLQTLRLRSIIYLCPEPYPEANTEFLKSNGIKLFQ 111
           IPPLNF MV + ++RSG P+  NF FL+ L+L+ II+L P+   +    F++   I+L  
Sbjct: 5   IPPLNFGMVADDLYRSGQPNELNFPFLEKLQLKKIIFLAPDDPSQQFQNFVEDQDIELIH 64

Query: 112 FAIEGHKEPFVNIPEDMIREALKVLLDVRNHPVLIHCKRGKHRTGCLVGCLRKLQKWCLS 171
             ++ H+ P+  I E+++  ALK++L+  N+P+ I C  G+HRTG +VGCLRKLQ+W L+
Sbjct: 65  LGMDTHQNPWNPISEEIVISALKIILNPDNYPLHIMCNLGRHRTGTVVGCLRKLQRWNLT 124

Query: 172 SVFDEYQRFAAAKARVSDQRGTRILSPAL 200
           S+F+EY+RFA +K ++ +++   +    L
Sbjct: 125 SIFEEYRRFAGSKVKLLNEQFIELFDTDL 153

Dictyostelium discoideum (taxid: 44689)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 4

EC: 8

>sp|Q4P7L6|OCA1_USTMA Putative tyrosine-protein phosphatase OCA1 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=OCA1 PE=3 SV=1

 Score =  116 bits (290), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 55/142 (38%), Positives = 86/142 (60%), Gaps = 1/142 (0%)

Query: 51  LIPPLNFSMVDNGIFRSGFPDSANFSFLQTLRLRSIIYLCPEPYPEANTEFLKSNGIKLF 110
           L+PP N+ MV+   +RSG PD  NF FL+ L L+S+I+L PE       +F     I+L 
Sbjct: 2   LVPPPNYGMVEENFYRSGQPDQLNFPFLEKLGLKSVIWLAPEEPEPGFLDFCVDQNIELH 61

Query: 111 QFAIEGHKEPFVNIPEDMIREALKVLLDVRNHPVLIHCKRGKHRTGCLVGCLRKLQKWCL 170
              +      +  I E+++ +AL +L+    +PVL+ C  G+HRTG +VGC RKLQ+W L
Sbjct: 62  HLGVLYSTNAWDPITEEVVLQALHLLVQPATYPVLVMCNLGRHRTGTVVGCFRKLQRWNL 121

Query: 171 SSVFDEYQRFAAA-KARVSDQR 191
           S++ +EY+RF    K R+ +++
Sbjct: 122 SAILEEYRRFVGGQKYRILNEQ 143

Putative tyrosine-protein phosphatase required for protection against superoxide stress.

Ustilago maydis (strain 521 / FGSC 9021) (taxid: 237631)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 4

EC: 8

>sp|Q6CTE4|OCA1_KLULA Putative tyrosine-protein phosphatase OCA1 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=OCA1 PE=3 SV=1

 Score =  112 bits (280), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 61/151 (40%), Positives = 94/151 (62%), Gaps = 13/151 (8%)

Query: 51  LIPPLNFSMVDNGIFRSGFPDSANFSFLQTLRLRSIIYLCPEPYPEANTEFLKSNGIKLF 110
           ++PPLNF  V+  ++RSG P + NF FL  L+L++II+L  E   +A  EF   + I+L 
Sbjct: 39  IVPPLNFCPVERYLYRSGQPSNVNFPFLLNLKLKTIIWLANEEPQDALLEFCDDHNIQL- 97

Query: 111 QFAI---EGHKE--PFVNIPEDMIREALKVLLDVRNHPVLIHCKRGKHRTGCLVGCLRKL 165
           QFA    +G ++  P+  + E  IR AL  +++  ++P+L+ C  G+HRTG ++GCLR+L
Sbjct: 98  QFAAINPDGGEDDNPWDGLTEHSIRNALHTIVNSESYPLLVCCGMGRHRTGTVIGCLRRL 157

Query: 166 QKWCLSSVFDEYQRFAAAKARVSDQRGTRIL 196
             W L+SV +EY+RF  +       RG RIL
Sbjct: 158 MGWNLASVSEEYRRFTGS-------RGGRIL 181

Putative tyrosine-protein phosphatase required for protection against superoxide stress.

Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) (taxid: 284590)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 4

EC: 8

>sp|A5DE24|OCA1_PICGU Putative tyrosine-protein phosphatase OCA1 OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) GN=OCA1 PE=3 SV=2

 Score =  112 bits (279), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 64/160 (40%), Positives = 94/160 (58%), Gaps = 13/160 (8%)

Query: 43  VVTGDEVTLIPPLNFSMVDNGIFRSGFPDSANFSFLQTLRLRSIIYLCPEPYPEANTEFL 102
           VV    + +IPPLNF  V+  ++RSG P   N SFLQ L L++II+L  E   E   ++ 
Sbjct: 5   VVQPPSLRIIPPLNFCPVEKQLYRSGQPSIINQSFLQDLNLKTIIWLASEEPQEEFLDYC 64

Query: 103 KSNGIKL-FQFAIEG-----HKEPFVNIPEDMIREALKVLLDVRNHPVLIHCKRGKHRTG 156
             N I + F   I       +  P+ ++ E  I++AL+++ D  N+P+L+ C  G+HRTG
Sbjct: 65  SMNSINIEFVGMINDDYSYQNVNPWDSLNETTIKKALELICDRNNYPMLVCCGMGRHRTG 124

Query: 157 CLVGCLRKLQKWCLSSVFDEYQRFAAAKARVSDQRGTRIL 196
            ++GCLR+LQ W L+SV +EY+RF  A       RG RIL
Sbjct: 125 TVIGCLRRLQGWNLASVSEEYRRFTGA-------RGGRIL 157

Putative tyrosine-protein phosphatase required for protection against superoxide stress.

Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) (taxid: 294746)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 4

EC: 8

>sp|Q6BLZ8|OCA1_DEBHA Putative tyrosine-protein phosphatase OCA1 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=OCA1 PE=3 SV=1

 Score =  110 bits (275), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 58/154 (37%), Positives = 94/154 (61%), Gaps = 14/154 (9%)

Query: 49  VTLIPPLNFSMVDNGIFRSGFPDSANFSFLQTLRLRSIIYLCPEPYPEANTEFLKSNGIK 108
           V +IPPLNF  V+  ++RSG P   N SFLQ L L++I++L  E   E   ++   N I 
Sbjct: 26  VRIIPPLNFCPVEKQLYRSGQPSIINQSFLQDLNLKTILWLASEEPQEDFLDYCSMNNIA 85

Query: 109 ------LFQFAIEGHKEPFVNIPEDMIREALKVLLDVRNHPVLIHCKRGKHRTGCLVGCL 162
                 + +++ + +  P+  + ED I++AL+++ +  N+P+L+ C  G+HRTG ++GCL
Sbjct: 86  VEFVGLMNEYSYQ-NVNPWDALSEDTIKKALELICNKENYPLLVCCGMGRHRTGTVIGCL 144

Query: 163 RKLQKWCLSSVFDEYQRFAAAKARVSDQRGTRIL 196
           R+LQ W L+SV +EY+RF  +       RG RI+
Sbjct: 145 RRLQGWNLASVSEEYRRFTGS-------RGGRIM 171

Putative tyrosine-protein phosphatase required for protection against superoxide stress.

Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) (taxid: 284592)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 4

EC: 8

>sp|Q75B37|OCA1_ASHGO Putative tyrosine-protein phosphatase OCA1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=OCA1 PE=3 SV=1

 Score =  110 bits (275), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 61/151 (40%), Positives = 91/151 (60%), Gaps = 11/151 (7%)

Query: 50  TLIPPLNFSMVDNGIFRSGFPDSANFSFLQTLRLRSIIYLCPEPYPEANTEFLKSNGIKL 109
           T++PPLNF  V+  ++RSG P + NF FL  L LR+II+L  E   +A   F   + I+L
Sbjct: 36  TIVPPLNFCPVERYLYRSGQPSTVNFPFLLNLNLRTIIWLANEEPQDALLAFCDMHDIRL 95

Query: 110 FQFAI--EGHKE--PFVNIPEDMIREALKVLLDVRNHPVLIHCKRGKHRTGCLVGCLRKL 165
              AI  EG ++  P+  + E  I  AL+ ++   N+P+L+ C  G+HRTG ++GCLR++
Sbjct: 96  RFAAINPEGGEDDNPWDGLTEHSIVSALQTIVHRDNYPLLVCCGMGRHRTGTVIGCLRRI 155

Query: 166 QKWCLSSVFDEYQRFAAAKARVSDQRGTRIL 196
             W L+SV +EY+RF  +       RG RIL
Sbjct: 156 MGWNLASVSEEYRRFTGS-------RGGRIL 179

Putative tyrosine-protein phosphatase required for protection against superoxide stress.

Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) (taxid: 284811)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 4

EC: 8

>sp|Q9UUF3|YNF3_SCHPO Probable tyrosine-protein phosphatase C17A3.03c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pi043 PE=1 SV=3

 Score =  110 bits (274), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 56/149 (37%), Positives = 86/149 (57%), Gaps = 12/149 (8%)

Query: 54  PLNFSMVDNGI-FRSGFPDSANFSFLQTLRLRSIIYLCPEPYPEANTEFLKSNGIKLFQF 112
           P NF +V  GI +RS  P ++NF+FL++L +R+II L  E Y E +  +   + I  +  
Sbjct: 83  PDNFGVVYPGIIYRSACPRASNFNFLESLHIRTIISLRQEEYSEEDLHYFTKHHINYYHI 142

Query: 113 AIEGHKE-----------PFVNIPEDMIREALKVLLDVRNHPVLIHCKRGKHRTGCLVGC 161
           A+ G K            P ++  +D++R+ L++LL+  N PVL+HC RGKHRTG ++GC
Sbjct: 143 AMPGSKHRKNDCISSSSNPDISDVDDLVRKTLQLLLNKENWPVLLHCSRGKHRTGIVIGC 202

Query: 162 LRKLQKWCLSSVFDEYQRFAAAKARVSDQ 190
           LR L  W + +   EY  F+  K R  D+
Sbjct: 203 LRALMNWPVGNRLQEYISFSHPKEREVDE 231

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 4

EC: 8

>sp|Q6C4X9|OCA1_YARLI Putative tyrosine-protein phosphatase OCA1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=OCA1 PE=3 SV=1

 Score =  105 bits (262), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 51/133 (38%), Positives = 83/133 (62%), Gaps = 3/133 (2%)

Query: 55  LNFSMVDNGIFRSGFPDSANFSFLQTLRLRSIIYLCPEPYPEANTEFLKSNGIKLFQFAI 114
           LNF  V+  ++RSG P+  +F FL+ LRLR+I++L  E   +    F   + I +    +
Sbjct: 92  LNFGPVERNLYRSGQPEPISFPFLEKLRLRTILWLAVEDPSDNFLAFADDHEIVVHHLGL 151

Query: 115 --EGHKEPFVNIPEDMIREALKVLLDVRNHPVLIHCKRGKHRTGCLVGCLRKLQKWCLSS 172
             EG   P+  + E  I  AL++++D  ++P+L+ C  G+HRTG +VGCLR+LQ W L+S
Sbjct: 152 VTEG-TNPWDQLTESSIVAALQIIMDRDSYPLLVCCGMGRHRTGTIVGCLRRLQGWNLAS 210

Query: 173 VFDEYQRFAAAKA 185
           V +EY+R+A ++ 
Sbjct: 211 VSEEYRRYAGSRG 223

Putative tyrosine-protein phosphatase required for protection against superoxide stress.

Yarrowia lipolytica (strain CLIB 122 / E 150) (taxid: 284591)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 4

EC: 8

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	201
255587792	212	Tyrosine-protein phosphatase SIW14, puta	0.930	0.882	0.778	5e-80
225447153	210	PREDICTED: probable tyrosine-protein pho	0.875	0.838	0.783	9e-80
297843300	215	tyrosine specific protein phosphatase fa	0.875	0.818	0.775	1e-77
15220383	215	putative tyrosine-protein phosphatase [A	0.895	0.837	0.75	6e-76
356553721	216	PREDICTED: probable tyrosine-protein pho	0.830	0.773	0.809	2e-74
356501267	187	PREDICTED: probable tyrosine-protein pho	0.810	0.871	0.808	2e-73
224131688	214	predicted protein [Populus trichocarpa]	0.726	0.682	0.876	3e-73
357493185	220	Tyrosine specific protein phosphatase fa	0.880	0.804	0.727	5e-73
388522071	220	unknown [Medicago truncatula]	0.880	0.804	0.727	8e-73
449517415	229	PREDICTED: probable tyrosine-protein pho	0.905	0.794	0.691	5e-72

>gi|255587792|ref|XP_002534397.1| Tyrosine-protein phosphatase SIW14, putative [Ricinus communis] gi|223525370|gb|EEF27985.1| Tyrosine-protein phosphatase SIW14, putative [Ricinus communis]

 Score =  302 bits (774), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 151/194 (77%), Positives = 169/194 (87%), Gaps = 7/194 (3%)

Query: 1   MKVDNPS--KHKIQQQEEEEEEAEQMCRTIEVASVVDL-SPQPAPVVTGDEVTLIPPLNF 57
           MKV+  S   H     +++++E   MC+TIEVA VVDL  P P P+V GDE++ IPPLNF
Sbjct: 1   MKVNRHSVNSHATANSDDDDDE---MCKTIEVA-VVDLRDPPPPPLVVGDELSFIPPLNF 56

Query: 58  SMVDNGIFRSGFPDSANFSFLQTLRLRSIIYLCPEPYPEANTEFLKSNGIKLFQFAIEGH 117
           SMVDNGIFRSGFPDSANFSFLQTL LRSII LCPEPYPE NTEFLK+NGI LFQF IEG+
Sbjct: 57  SMVDNGIFRSGFPDSANFSFLQTLELRSIICLCPEPYPELNTEFLKANGITLFQFGIEGY 116

Query: 118 KEPFVNIPEDMIREALKVLLDVRNHPVLIHCKRGKHRTGCLVGCLRKLQKWCLSSVFDEY 177
           KEPFVNIPEDMIREALKV+LDVRNHPVL+HCKRGKHRTGC+VGCLRKLQ+WCL+S+FDEY
Sbjct: 117 KEPFVNIPEDMIREALKVVLDVRNHPVLVHCKRGKHRTGCVVGCLRKLQRWCLTSIFDEY 176

Query: 178 QRFAAAKARVSDQR 191
           QRFAAAKARVSDQR
Sbjct: 177 QRFAAAKARVSDQR 190

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225447153|ref|XP_002275443.1| PREDICTED: probable tyrosine-protein phosphatase At1g05000 isoform 1 [Vitis vinifera]

 Score =  301 bits (772), Expect = 9e-80,   Method: Compositional matrix adjust.
 Identities = 145/185 (78%), Positives = 157/185 (84%), Gaps = 9/185 (4%)

Query: 16  EEEEEAEQMCRTIEVASVV---DLSPQPAPVVTGDEVT------LIPPLNFSMVDNGIFR 66
           E   + + MC+TIEVASVV    LSP  A V  GDE+         PPLNF+MVDNGIFR
Sbjct: 4   ENSHDTDDMCKTIEVASVVVVDHLSPSKALVAAGDELDRDGEELFTPPLNFAMVDNGIFR 63

Query: 67  SGFPDSANFSFLQTLRLRSIIYLCPEPYPEANTEFLKSNGIKLFQFAIEGHKEPFVNIPE 126
           SGFPD+ANF+FLQTL LRSIIYLCPE YPEAN EFLKSNGIKLFQF IEG+KEPFVNIPE
Sbjct: 64  SGFPDTANFAFLQTLGLRSIIYLCPETYPEANNEFLKSNGIKLFQFGIEGYKEPFVNIPE 123

Query: 127 DMIREALKVLLDVRNHPVLIHCKRGKHRTGCLVGCLRKLQKWCLSSVFDEYQRFAAAKAR 186
           D IREALKV+LDVRNHP+LIHCKRGKHRTGC+VGCLRKLQKWCLSS+FDEYQRFAAAKAR
Sbjct: 124 DTIREALKVVLDVRNHPLLIHCKRGKHRTGCVVGCLRKLQKWCLSSIFDEYQRFAAAKAR 183

Query: 187 VSDQR 191
           VSDQR
Sbjct: 184 VSDQR 188

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297843300|ref|XP_002889531.1| tyrosine specific protein phosphatase family protein [Arabidopsis lyrata subsp. lyrata] gi|297335373|gb|EFH65790.1| tyrosine specific protein phosphatase family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  295 bits (754), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 142/183 (77%), Positives = 156/183 (85%), Gaps = 7/183 (3%)

Query: 16  EEEEEAEQMCRTIEVASVV-------DLSPQPAPVVTGDEVTLIPPLNFSMVDNGIFRSG 68
           EE++  E +CRTIEV+ V        D    P  VV+GDE+ LIPPLNFSMVDNGIFRSG
Sbjct: 11  EEDDNGEDVCRTIEVSEVDRNGFQAPDGEVDPFRVVSGDELNLIPPLNFSMVDNGIFRSG 70

Query: 69  FPDSANFSFLQTLRLRSIIYLCPEPYPEANTEFLKSNGIKLFQFAIEGHKEPFVNIPEDM 128
           FPDSANFSFLQTL LRSIIYLCPEPY E+N +FLKSNGI+LFQF IEG+KEPFVNIP+  
Sbjct: 71  FPDSANFSFLQTLGLRSIIYLCPEPYTESNLQFLKSNGIRLFQFGIEGNKEPFVNIPDRK 130

Query: 129 IREALKVLLDVRNHPVLIHCKRGKHRTGCLVGCLRKLQKWCLSSVFDEYQRFAAAKARVS 188
           IR ALKVLLD +NHPVLIHCKRGKHRTGCLVGCLRKLQKWCL+S+FDEYQRFAAAKARVS
Sbjct: 131 IRMALKVLLDEKNHPVLIHCKRGKHRTGCLVGCLRKLQKWCLTSIFDEYQRFAAAKARVS 190

Query: 189 DQR 191
           DQR
Sbjct: 191 DQR 193

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15220383|ref|NP_171993.1| putative tyrosine-protein phosphatase [Arabidopsis thaliana] gi|73921030|sp|Q9ZVN4.1|Y1500_ARATH RecName: Full=Probable tyrosine-protein phosphatase At1g05000 gi|4056425|gb|AAC97999.1| ESTs gb|H36249, gb|AA59732 and gb|AA651219 come from this gene [Arabidopsis thaliana] gi|28950701|gb|AAO63274.1| At1g05000 [Arabidopsis thaliana] gi|110736114|dbj|BAF00029.1| hypothetical protein [Arabidopsis thaliana] gi|255957210|gb|ACU43461.1| PTP135 [Arabidopsis thaliana] gi|332189656|gb|AEE27777.1| putative tyrosine-protein phosphatase [Arabidopsis thaliana]

 Score =  288 bits (738), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 141/188 (75%), Positives = 156/188 (82%), Gaps = 8/188 (4%)

Query: 17  EEEEAEQMCRTIEVASVVDLSPQPAP--------VVTGDEVTLIPPLNFSMVDNGIFRSG 68
           E++  E  CRTI   S V+ +   AP        VV+G+E+ LIPPLNFSMVDNGIFRSG
Sbjct: 11  EQDNGEDFCRTIIEVSEVNRNVFQAPGGEADPFRVVSGEELHLIPPLNFSMVDNGIFRSG 70

Query: 69  FPDSANFSFLQTLRLRSIIYLCPEPYPEANTEFLKSNGIKLFQFAIEGHKEPFVNIPEDM 128
           FPDSANFSFLQTL LRSIIYLCPEPYPE+N +FLKSNGI+LFQF IEG+KEPFVNIP+  
Sbjct: 71  FPDSANFSFLQTLGLRSIIYLCPEPYPESNLQFLKSNGIRLFQFGIEGNKEPFVNIPDHK 130

Query: 129 IREALKVLLDVRNHPVLIHCKRGKHRTGCLVGCLRKLQKWCLSSVFDEYQRFAAAKARVS 188
           IR ALKVLLD +NHPVLIHCKRGKHRTGCLVGCLRKLQKWCL+S+FDEYQRFAAAKARVS
Sbjct: 131 IRMALKVLLDEKNHPVLIHCKRGKHRTGCLVGCLRKLQKWCLTSIFDEYQRFAAAKARVS 190

Query: 189 DQRGTRIL 196
           DQR   I 
Sbjct: 191 DQRFMEIF 198

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356553721|ref|XP_003545201.1| PREDICTED: probable tyrosine-protein phosphatase At1g05000-like [Glycine max]

 Score =  283 bits (725), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 136/168 (80%), Positives = 146/168 (86%), Gaps = 1/168 (0%)

Query: 24  MCRTIEVASVVDLSPQPAPVVTGDEVTLIPPLNFSMVDNGIFRSGFPDSANFSFLQTLRL 83
           MCR I++ ++ D +     V    E   IPPLNF+MVDNGIFRSGFP+ ANFSFLQTL L
Sbjct: 26  MCRQIQL-TISDHTVAGDAVADDGEDLFIPPLNFAMVDNGIFRSGFPEPANFSFLQTLGL 84

Query: 84  RSIIYLCPEPYPEANTEFLKSNGIKLFQFAIEGHKEPFVNIPEDMIREALKVLLDVRNHP 143
           RSIIYLCPEPYPEAN EFLKSNGIKLFQF IEGHKEPFVNIPED IREAL+V+LDVRNHP
Sbjct: 85  RSIIYLCPEPYPEANMEFLKSNGIKLFQFGIEGHKEPFVNIPEDTIREALEVVLDVRNHP 144

Query: 144 VLIHCKRGKHRTGCLVGCLRKLQKWCLSSVFDEYQRFAAAKARVSDQR 191
           V+IHCKRGKHRTGCLVGC RKLQKWCLSSVFDEYQRFAAAKARVSDQR
Sbjct: 145 VIIHCKRGKHRTGCLVGCYRKLQKWCLSSVFDEYQRFAAAKARVSDQR 192

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356501267|ref|XP_003519447.1| PREDICTED: probable tyrosine-protein phosphatase At1g05000-like [Glycine max]

 Score =  280 bits (716), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 135/167 (80%), Positives = 142/167 (85%), Gaps = 4/167 (2%)

Query: 24  MCRTIEVASVVDLSPQPAPVVTGDEVTLIPPLNFSMVDNGIFRSGFPDSANFSFLQTLRL 83
           MCR I++     +S          E   IPPLNF+MVDNGIFRSGFP+ ANFSFLQTL L
Sbjct: 23  MCRQIQLT----ISDHTTAGDDDGEDLFIPPLNFAMVDNGIFRSGFPEPANFSFLQTLGL 78

Query: 84  RSIIYLCPEPYPEANTEFLKSNGIKLFQFAIEGHKEPFVNIPEDMIREALKVLLDVRNHP 143
           RSIIYLCPEPYPEAN EFLKSNGIKLFQF IEGHKEPFVNIPED IREALKV+LDVRNHP
Sbjct: 79  RSIIYLCPEPYPEANMEFLKSNGIKLFQFGIEGHKEPFVNIPEDTIREALKVVLDVRNHP 138

Query: 144 VLIHCKRGKHRTGCLVGCLRKLQKWCLSSVFDEYQRFAAAKARVSDQ 190
           V+IHCKRGKHRTGCLVGC RKLQKWCLSSVFDEYQRFAAAKARVSDQ
Sbjct: 139 VIIHCKRGKHRTGCLVGCYRKLQKWCLSSVFDEYQRFAAAKARVSDQ 185

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224131688|ref|XP_002321153.1| predicted protein [Populus trichocarpa] gi|222861926|gb|EEE99468.1| predicted protein [Populus trichocarpa]

 Score =  280 bits (715), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 128/146 (87%), Positives = 137/146 (93%)

Query: 46  GDEVTLIPPLNFSMVDNGIFRSGFPDSANFSFLQTLRLRSIIYLCPEPYPEANTEFLKSN 105
           GDE+ LIPPLNF+MVDNGIFRSGFPDSANF+FLQTL LRSII LCPEPYPEA TEFLK  
Sbjct: 47  GDELNLIPPLNFAMVDNGIFRSGFPDSANFAFLQTLGLRSIICLCPEPYPEATTEFLKDG 106

Query: 106 GIKLFQFAIEGHKEPFVNIPEDMIREALKVLLDVRNHPVLIHCKRGKHRTGCLVGCLRKL 165
           GI+L+QF IEG+KEPFVNIPED IREALKV+LD +NHPVLIHCKRGKHRTGCLVGCLRKL
Sbjct: 107 GIRLYQFGIEGYKEPFVNIPEDTIREALKVVLDAKNHPVLIHCKRGKHRTGCLVGCLRKL 166

Query: 166 QKWCLSSVFDEYQRFAAAKARVSDQR 191
           QKWCLSS+FDEYQRFAAAKARVSDQR
Sbjct: 167 QKWCLSSIFDEYQRFAAAKARVSDQR 192

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357493185|ref|XP_003616881.1| Tyrosine specific protein phosphatase family protein [Medicago truncatula] gi|355518216|gb|AES99839.1| Tyrosine specific protein phosphatase family protein [Medicago truncatula]

 Score =  279 bits (713), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 136/187 (72%), Positives = 150/187 (80%), Gaps = 10/187 (5%)

Query: 14  QEEEEEEAEQMCRTIEVASVVDLSPQPAPVVTGD---------EVTLIPPLNFSMVDNGI 64
           Q +++ +  QMCR I++ ++ D +         D         E   IPPLNF+MVDNGI
Sbjct: 13  QHKKKNQETQMCRKIKL-NISDHNNLKQTTTVDDVDVCDKIDGEDLFIPPLNFAMVDNGI 71

Query: 65  FRSGFPDSANFSFLQTLRLRSIIYLCPEPYPEANTEFLKSNGIKLFQFAIEGHKEPFVNI 124
           FRSGFP+ +NFSFLQTL L SIIYLCPEPYPEAN EFLKSNGIKL+ F IEGHKEPFVNI
Sbjct: 72  FRSGFPEPSNFSFLQTLGLGSIIYLCPEPYPEANLEFLKSNGIKLYHFGIEGHKEPFVNI 131

Query: 125 PEDMIREALKVLLDVRNHPVLIHCKRGKHRTGCLVGCLRKLQKWCLSSVFDEYQRFAAAK 184
           PED IREALKVLLDVRNHPV+IHCKRGKHRTGCLVGC RKLQKWCLSSVFDEYQRFAAAK
Sbjct: 132 PEDTIREALKVLLDVRNHPVIIHCKRGKHRTGCLVGCYRKLQKWCLSSVFDEYQRFAAAK 191

Query: 185 ARVSDQR 191
           ARVSDQR
Sbjct: 192 ARVSDQR 198

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388522071|gb|AFK49097.1| unknown [Medicago truncatula]

 Score =  278 bits (711), Expect = 8e-73,   Method: Compositional matrix adjust.
 Identities = 136/187 (72%), Positives = 150/187 (80%), Gaps = 10/187 (5%)

Query: 14  QEEEEEEAEQMCRTIEVASVVDLSPQPAPVVTGD---------EVTLIPPLNFSMVDNGI 64
           Q +++ +  QMCR I++ ++ D +         D         E   IPPLNF+MVDNGI
Sbjct: 13  QHKKKNQETQMCRKIKL-NISDHNNLKQTTTVDDVDVCDKIDGEDLFIPPLNFAMVDNGI 71

Query: 65  FRSGFPDSANFSFLQTLRLRSIIYLCPEPYPEANTEFLKSNGIKLFQFAIEGHKEPFVNI 124
           FRSGFP+ +NFSFLQTL L SIIYLCPEPYPEAN EFLKSNGIKL+ F IEGHKEPFVNI
Sbjct: 72  FRSGFPEPSNFSFLQTLGLGSIIYLCPEPYPEANLEFLKSNGIKLYHFGIEGHKEPFVNI 131

Query: 125 PEDMIREALKVLLDVRNHPVLIHCKRGKHRTGCLVGCLRKLQKWCLSSVFDEYQRFAAAK 184
           PED IREALKVLLDVRNHPV+IHCKRGKHRTGCLVGC RKLQKWCLSSVFDEYQRFAAAK
Sbjct: 132 PEDTIREALKVLLDVRNHPVIIHCKRGKHRTGCLVGCYRKLQKWCLSSVFDEYQRFAAAK 191

Query: 185 ARVSDQR 191
           ARVSDQR
Sbjct: 192 ARVSDQR 198

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449517415|ref|XP_004165741.1| PREDICTED: probable tyrosine-protein phosphatase At1g05000-like [Cucumis sativus]

 Score =  276 bits (705), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 132/191 (69%), Positives = 154/191 (80%), Gaps = 9/191 (4%)

Query: 10  KIQQQEEEEEEAEQMCRTIEV---------ASVVDLSPQPAPVVTGDEVTLIPPLNFSMV 60
           K ++  +   +++Q+CRTI+V         +S++ +         GD+   IPPLNFSMV
Sbjct: 2   KFEEPNQNHHQSKQICRTIQVDTIDHHHTISSLLAMEASEFCDKDGDDGLYIPPLNFSMV 61

Query: 61  DNGIFRSGFPDSANFSFLQTLRLRSIIYLCPEPYPEANTEFLKSNGIKLFQFAIEGHKEP 120
           DNGIFRSGFPDS NFSFLQTL LRSII LCPEPYPE N +FLKSNGI+LFQF IE  KEP
Sbjct: 62  DNGIFRSGFPDSPNFSFLQTLALRSIICLCPEPYPEHNMDFLKSNGIRLFQFGIESCKEP 121

Query: 121 FVNIPEDMIREALKVLLDVRNHPVLIHCKRGKHRTGCLVGCLRKLQKWCLSSVFDEYQRF 180
           FVNIP+D+IREALKV+LD RNHP+LIHCKRGKHRTGCLVGCLRKLQ+WCL+SVFDEYQRF
Sbjct: 122 FVNIPDDIIREALKVVLDDRNHPLLIHCKRGKHRTGCLVGCLRKLQRWCLTSVFDEYQRF 181

Query: 181 AAAKARVSDQR 191
           AAAKAR+SDQR
Sbjct: 182 AAAKARISDQR 192

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	201
TAIR|locus:2205513	247	PFA-DSP1 "AT1G05000" [Arabidop	0.467	0.380	0.735	3.7e-68
TAIR|locus:2059349	257	PFA-DSP2 "AT2G32960" [Arabidop	0.452	0.354	0.712	3.3e-63
TAIR|locus:2136718	198	PFA-DSP4 "AT4G03960" [Arabidop	0.721	0.732	0.773	5.5e-61
TAIR|locus:2075527	203	PFA-DSP3 "AT3G02800" [Arabidop	0.706	0.699	0.680	6.5e-51
TAIR|locus:2171317	204	PFA-DSP5 "AT5G16480" [Arabidop	0.721	0.710	0.668	9.5e-50
DICTYBASE|DDB_G0285909	181	DDB_G0285909 "putative protein	0.731	0.812	0.619	1.5e-49
SGD|S000004977	281	SIW14 "Tyrosine phosphatase in	0.701	0.501	0.577	2.5e-42
CGD|CAL0001689	281	SIW14 [Candida albicans (taxid	0.701	0.501	0.560	1.2e-40
UNIPROTKB|Q59MU0	281	SIW14 "Putative uncharacterize	0.701	0.501	0.560	1.2e-40
DICTYBASE|DDB_G0281953	166	DDB_G0281953 "putative tyrosin	0.696	0.843	0.428	1.1e-30

TAIR|locus:2205513 PFA-DSP1 "AT1G05000" [Arabidopsis thaliana (taxid:3702)]

 Score = 356 (130.4 bits), Expect = 3.7e-68, Sum P(2) = 3.7e-68
 Identities = 75/102 (73%), Positives = 84/102 (82%)

Query:    25 CRTI-EVASV---VDLSP----QPAPVVTGDEVTLIPPLNFSMVDNGIFRSGFPDSANFS 76
             CRTI EV+ V   V  +P     P  VV+G+E+ LIPPLNFSMVDNGIFRSGFPDSANFS
Sbjct:    19 CRTIIEVSEVNRNVFQAPGGEADPFRVVSGEELHLIPPLNFSMVDNGIFRSGFPDSANFS 78

Query:    77 FLQTLRLRSIIYLCPEPYPEANTEFLKSNGIKLFQFAIEGHK 118
             FLQTL LRSIIYLCPEPYPE+N +FLKSNGI+LFQF IEG+K
Sbjct:    79 FLQTLGLRSIIYLCPEPYPESNLQFLKSNGIRLFQFGIEGNK 120

GO:0004721 "phosphoprotein phosphatase activity" evidence=ISS

GO:0004725 "protein tyrosine phosphatase activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0016311 "dephosphorylation" evidence=IEA

GO:0016791 "phosphatase activity" evidence=IEA;IDA

GO:0007243 "intracellular protein kinase cascade" evidence=RCA

GO:0043407 "negative regulation of MAP kinase activity" evidence=RCA

TAIR|locus:2059349 PFA-DSP2 "AT2G32960" [Arabidopsis thaliana (taxid:3702)]

 Score = 333 (122.3 bits), Expect = 3.3e-63, Sum P(2) = 3.3e-63
 Identities = 72/101 (71%), Positives = 77/101 (76%)

Query:    27 TIEVASVVDLS--PQPAPVVT-------GDEVTLIPPLNFSMVDNGIFRSGFPDSANFSF 77
             TIEVA V D +   QP P  T       GDE+ LIPPLNFSMVDNGIFRSGFPDSANFSF
Sbjct:    29 TIEVAKV-DRNNVSQPPPAATAALLEVPGDELNLIPPLNFSMVDNGIFRSGFPDSANFSF 87

Query:    78 LQTLRLRSIIYLCPEPYPEANTEFLKSNGIKLFQFAIEGHK 118
             ++TL LRSII LCPEPYPE N +FLKSNGI LFQF IEG K
Sbjct:    88 IKTLGLRSIISLCPEPYPENNMQFLKSNGISLFQFGIEGSK 128

GO:0003824 "catalytic activity" evidence=ISS

GO:0004725 "protein tyrosine phosphatase activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0016311 "dephosphorylation" evidence=IEA

GO:0016791 "phosphatase activity" evidence=IEA;IDA

TAIR|locus:2136718 PFA-DSP4 "AT4G03960" [Arabidopsis thaliana (taxid:3702)]

 Score = 624 (224.7 bits), Expect = 5.5e-61, P = 5.5e-61
 Identities = 113/146 (77%), Positives = 131/146 (89%)

Query:    46 GDEVTLIPPLNFSMVDNGIFRSGFPDSANFSFLQTLRLRSIIYLCPEPYPEANTEFLKSN 105
             G E+  +PPLNF+MVDNGIFRSGFP+  +FSFLQ+LRL+SIIYLCPE YPE N EF KSN
Sbjct:    25 GGEL-FVPPLNFAMVDNGIFRSGFPEPVSFSFLQSLRLKSIIYLCPEAYPEVNREFAKSN 83

Query:   106 GIKLFQFAIEGHKEPFVNIPEDMIREALKVLLDVRNHPVLIHCKRGKHRTGCLVGCLRKL 165
             GI++FQF IE  KEPFVNIP+++IREAL+VLLD  NHPVLIHCK GKHRTGCLVGC+RK+
Sbjct:    84 GIQVFQFGIERCKEPFVNIPDEVIREALQVLLDTENHPVLIHCKSGKHRTGCLVGCVRKI 143

Query:   166 QKWCLSSVFDEYQRFAAAKARVSDQR 191
             Q+WCLSS+FDEYQRFAAAKAR+SDQR
Sbjct:   144 QRWCLSSIFDEYQRFAAAKARISDQR 169

GO:0004721 "phosphoprotein phosphatase activity" evidence=ISS

GO:0004725 "protein tyrosine phosphatase activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0016791 "phosphatase activity" evidence=IEA

GO:1900424 "regulation of defense response to bacterium" evidence=IMP

GO:0007243 "intracellular protein kinase cascade" evidence=RCA

GO:0043407 "negative regulation of MAP kinase activity" evidence=RCA

TAIR|locus:2075527 PFA-DSP3 "AT3G02800" [Arabidopsis thaliana (taxid:3702)]

 Score = 529 (191.3 bits), Expect = 6.5e-51, P = 6.5e-51
 Identities = 98/144 (68%), Positives = 116/144 (80%)

Query:    46 GDEVTLIPPLNFSMVDNGIFRSGFPDSANFSFLQTLRLRSIIYLCPEPYPEANTEFLKSN 105
             GD   L PP NFSMV++GI+RSGFP   NFSFL+TL LRSIIYLCPEPYPE N +FL++N
Sbjct:    12 GD--VLAPPSNFSMVEDGIYRSGFPRPENFSFLKTLNLRSIIYLCPEPYPEENLKFLEAN 69

Query:   106 GIKLFQFAIEGHKEPFVNIPEDMIREALKVLLDVRNHPVLIHCKRGKHRTGCLVGCLRKL 165
              IKL+QF IEG  +P   +P+D + +ALKVL+DVRNHP+LIHCKRGKHRTGCLVGCLRK+
Sbjct:    70 NIKLYQFGIEGKTDPPTPMPKDTVLDALKVLVDVRNHPILIHCKRGKHRTGCLVGCLRKV 129

Query:   166 QKWCLSSVFDEYQRFAAAKARVSD 189
             Q WCLSSV +EYQ+ A  K R  D
Sbjct:   130 QSWCLSSVLEEYQKNAGLKWRQRD 153

GO:0004721 "phosphoprotein phosphatase activity" evidence=ISS

GO:0004725 "protein tyrosine phosphatase activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM;IDA

GO:0016311 "dephosphorylation" evidence=IEA

GO:0016791 "phosphatase activity" evidence=IEA;IDA

GO:0005634 "nucleus" evidence=IDA

GO:0007243 "intracellular protein kinase cascade" evidence=RCA

GO:0009644 "response to high light intensity" evidence=RCA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0035556 "intracellular signal transduction" evidence=RCA

GO:0042542 "response to hydrogen peroxide" evidence=RCA

GO:0043407 "negative regulation of MAP kinase activity" evidence=RCA

TAIR|locus:2171317 PFA-DSP5 "AT5G16480" [Arabidopsis thaliana (taxid:3702)]

 Score = 518 (187.4 bits), Expect = 9.5e-50, P = 9.5e-50
 Identities = 97/145 (66%), Positives = 112/145 (77%)

Query:    47 DEVTLIPPLNFSMVDNGIFRSGFPDSANFSFLQTLRLRSIIYLCPEPYPEANTEFLKSNG 106
             D   LIPP NFSMV++ I+RSGFP+  NF FL TL LRSIIYLCPEPYPE N + L SN 
Sbjct:    10 DGEVLIPPPNFSMVEDEIYRSGFPELENFGFLSTLNLRSIIYLCPEPYPEDNLKSLASNN 69

Query:   107 IKLFQFAIEGHKEPFVNIPEDMIREALKVLLDVRNHPVLIHCKRGKHRTGCLVGCLRKLQ 166
             IKLFQF IEG  +P   +P+D +  AL+VL+DVRNHP+LIHCKRGKHRTGCLVGCLRK+Q
Sbjct:    70 IKLFQFGIEGKTDPPTPMPKDTVLSALRVLVDVRNHPILIHCKRGKHRTGCLVGCLRKVQ 129

Query:   167 KWCLSSVFDEYQRFAAAKARVSDQR 191
              WCLSSV +EYQ+ A  K R  D R
Sbjct:   130 NWCLSSVLEEYQKCAGLKWRQRDLR 154

GO:0004721 "phosphoprotein phosphatase activity" evidence=ISS

GO:0004725 "protein tyrosine phosphatase activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0016311 "dephosphorylation" evidence=IEA

GO:0016791 "phosphatase activity" evidence=IEA;IDA

DICTYBASE|DDB_G0285909 DDB_G0285909 "putative protein tyrosine phosphatase" [Dictyostelium discoideum (taxid:44689)]

 Score = 516 (186.7 bits), Expect = 1.5e-49, P = 1.5e-49
 Identities = 91/147 (61%), Positives = 117/147 (79%)

Query:    45 TGDEVTLIPPLNFSMVDNGIFRSGFPDSANFSFLQTLRLRSIIYLCPEPYPEANTEFLKS 104
             T ++   IPPLNFSMV  G++RSG+P+  N  FL+ L L+SI+YLCPE Y E+NT F++ 
Sbjct:    13 TKEDPLFIPPLNFSMVSRGVYRSGYPNKKNHPFLKKLGLKSILYLCPEEYSESNTNFIRK 72

Query:   105 NGIKLFQFAIEGHKEPFVNIPEDMIREALKVLLDVRNHPVLIHCKRGKHRTGCLVGCLRK 164
             +GIKL  + I G+KEPFV+IP++ IR+AL  LLDVRNHP+LIHC +GKHRTGCLVGCLRK
Sbjct:    73 HGIKLLHYRIVGNKEPFVDIPDEYIRDALVDLLDVRNHPILIHCNKGKHRTGCLVGCLRK 132

Query:   165 LQKWCLSSVFDEYQRFAAAKARVSDQR 191
             LQKW  + +FDEY+RFA +K RV DQ+
Sbjct:   133 LQKWSYTYIFDEYRRFAGSKVRVLDQQ 159

GO:0035335 "peptidyl-tyrosine dephosphorylation" evidence=IEA;ISS

GO:0016791 "phosphatase activity" evidence=IEA

GO:0016311 "dephosphorylation" evidence=IEA

GO:0004725 "protein tyrosine phosphatase activity" evidence=IEA;ISS

GO:0005575 "cellular_component" evidence=ND

GO:0006470 "protein dephosphorylation" evidence=ISS

GO:0016787 "hydrolase activity" evidence=IEA

SGD|S000004977 SIW14 "Tyrosine phosphatase involved in actin organization and endocytosis" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 448 (162.8 bits), Expect = 2.5e-42, P = 2.5e-42
 Identities = 82/142 (57%), Positives = 106/142 (74%)

Query:    51 LIPPLNFSMVDNGIFRSGFPDSANFSFL-QTLRLRSIIYLCPEPYPEANTEFLKSNGIKL 109
             +IPP NFS V   I+RS FP   NFSFL + L+L+SI+ L PE YP+ N  FLK  GIKL
Sbjct:   116 VIPPENFSHVVGEIYRSSFPRQENFSFLHERLKLKSILVLIPEEYPQENLNFLKLTGIKL 175

Query:   110 FQFAIEGHKEPFVNIPEDMIREALKVLLDVRNHPVLIHCKRGKHRTGCLVGCLRKLQKWC 169
             +Q  + G+KEPFVNIP  ++ +AL+++L+  N P+LIHC RGKHRTGCL+GC+RKLQ W 
Sbjct:   176 YQVGMSGNKEPFVNIPSHLLTKALEIVLNPANQPILIHCNRGKHRTGCLIGCIRKLQNWS 235

Query:   170 LSSVFDEYQRFAAAKARVSDQR 191
             L+ +FDEY+RFA  KAR  DQ+
Sbjct:   236 LTMIFDEYRRFAFPKARALDQQ 257

GO:0005737 "cytoplasm" evidence=IEA;IDA

GO:0016787 "hydrolase activity" evidence=IEA

GO:0035335 "peptidyl-tyrosine dephosphorylation" evidence=IEA

GO:0004725 "protein tyrosine phosphatase activity" evidence=IEA;ISS

GO:0016311 "dephosphorylation" evidence=IEA

GO:0016791 "phosphatase activity" evidence=IEA

GO:0006470 "protein dephosphorylation" evidence=ISS

GO:0006950 "response to stress" evidence=IGI

GO:0006897 "endocytosis" evidence=IMP

GO:0007015 "actin filament organization" evidence=IMP

GO:0004721 "phosphoprotein phosphatase activity" evidence=IEA

CGD|CAL0001689 SIW14 [Candida albicans (taxid:5476)]

 Score = 432 (157.1 bits), Expect = 1.2e-40, P = 1.2e-40
 Identities = 79/141 (56%), Positives = 102/141 (72%)

Query:    51 LIPPLNFSMVDNGIFRSGFPDSANFSFLQTLRLRSIIYLCPEPYPEANTEFLKSNGIKLF 110
             L PP NF+ V N I+RS FP   NF+FL+ L+L+SI+ L PE YP    EF+K+  IKLF
Sbjct:   116 LTPPENFAPVINKIYRSSFPQPNNFAFLKKLKLKSILCLIPEDYPHLQQEFIKNENIKLF 175

Query:   111 QFAIEGHKEPFVNIPEDMIREALKVLLDVRNHPVLIHCKRGKHRTGCLVGCLRKLQKWCL 170
             Q  + G+KEPFV I  D+I EA+K++L+  N P+LIHC RGKHRTGCLVG +RKLQ W L
Sbjct:   176 QLGMSGNKEPFVKISADLITEAVKIVLNPENQPILIHCNRGKHRTGCLVGVIRKLQNWSL 235

Query:   171 SSVFDEYQRFAAAKARVSDQR 191
             + +FDEY++FA  K R  DQ+
Sbjct:   236 TLIFDEYRKFACPKERPMDQQ 256

GO:0004725 "protein tyrosine phosphatase activity" evidence=TAS

GO:0006470 "protein dephosphorylation" evidence=TAS

GO:0005634 "nucleus" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0007015 "actin filament organization" evidence=IEA

GO:0006950 "response to stress" evidence=IEA

GO:0006897 "endocytosis" evidence=IEA

UNIPROTKB|Q59MU0 SIW14 "Putative uncharacterized protein SIW14" [Candida albicans SC5314 (taxid:237561)]

 Score = 432 (157.1 bits), Expect = 1.2e-40, P = 1.2e-40
 Identities = 79/141 (56%), Positives = 102/141 (72%)

Query:    51 LIPPLNFSMVDNGIFRSGFPDSANFSFLQTLRLRSIIYLCPEPYPEANTEFLKSNGIKLF 110
             L PP NF+ V N I+RS FP   NF+FL+ L+L+SI+ L PE YP    EF+K+  IKLF
Sbjct:   116 LTPPENFAPVINKIYRSSFPQPNNFAFLKKLKLKSILCLIPEDYPHLQQEFIKNENIKLF 175

Query:   111 QFAIEGHKEPFVNIPEDMIREALKVLLDVRNHPVLIHCKRGKHRTGCLVGCLRKLQKWCL 170
             Q  + G+KEPFV I  D+I EA+K++L+  N P+LIHC RGKHRTGCLVG +RKLQ W L
Sbjct:   176 QLGMSGNKEPFVKISADLITEAVKIVLNPENQPILIHCNRGKHRTGCLVGVIRKLQNWSL 235

Query:   171 SSVFDEYQRFAAAKARVSDQR 191
             + +FDEY++FA  K R  DQ+
Sbjct:   236 TLIFDEYRKFACPKERPMDQQ 256

GO:0004725 "protein tyrosine phosphatase activity" evidence=TAS

GO:0006470 "protein dephosphorylation" evidence=TAS

GO:0035335 "peptidyl-tyrosine dephosphorylation" evidence=TAS

DICTYBASE|DDB_G0281953 DDB_G0281953 "putative tyrosine phosphatase family protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 338 (124.0 bits), Expect = 1.1e-30, P = 1.1e-30
 Identities = 60/140 (42%), Positives = 98/140 (70%)

Query:    52 IPPLNFSMVDNGIFRSGFPDSANFSFLQTLRLRSIIYLCPEPYPEANTEFLKSNGIKLFQ 111
             IPPLNF MV + ++RSG P+  NF FL+ L+L+ II+L P+   +    F++   I+L  
Sbjct:     5 IPPLNFGMVADDLYRSGQPNELNFPFLEKLQLKKIIFLAPDDPSQQFQNFVEDQDIELIH 64

Query:   112 FAIEGHKEPFVNIPEDMIREALKVLLDVRNHPVLIHCKRGKHRTGCLVGCLRKLQKWCLS 171
               ++ H+ P+  I E+++  ALK++L+  N+P+ I C  G+HRTG +VGCLRKLQ+W L+
Sbjct:    65 LGMDTHQNPWNPISEEIVISALKIILNPDNYPLHIMCNLGRHRTGTVVGCLRKLQRWNLT 124

Query:   172 SVFDEYQRFAAAKARVSDQR 191
             S+F+EY+RFA +K ++ +++
Sbjct:   125 SIFEEYRRFAGSKVKLLNEQ 144

GO:0035335 "peptidyl-tyrosine dephosphorylation" evidence=IEA

GO:0004725 "protein tyrosine phosphatase activity" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0016787 "hydrolase activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0004721 "phosphoprotein phosphatase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9ZVN4	Y1500_ARATH	3, ., 1, ., 3, ., 4, 8	0.75	0.8955	0.8372	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.1.3	0.766
3rd Layer	3.1.3.48	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	201
pfam03162	150	pfam03162, Y_phosphatase2, Tyrosine phosphatase fa	5e-75
COG2365	249	COG2365, COG2365, Protein tyrosine/serine phosphat	1e-15
COG2453	180	COG2453, CDC14, Predicted protein-tyrosine phospha	8e-04
cd00127	139	cd00127, DSPc, Dual specificity phosphatases (DSP)	0.001
pfam13350	163	pfam13350, Y_phosphatase3, Tyrosine phosphatase fa	0.001
smart00195	138	smart00195, DSPc, Dual specificity phosphatase, ca	0.002
pfam00102	233	pfam00102, Y_phosphatase, Protein-tyrosine phospha	0.002

>gnl|CDD|111998 pfam03162, Y_phosphatase2, Tyrosine phosphatase family

 Score =  222 bits (567), Expect = 5e-75
 Identities = 83/141 (58%), Positives = 116/141 (82%)

Query: 51  LIPPLNFSMVDNGIFRSGFPDSANFSFLQTLRLRSIIYLCPEPYPEANTEFLKSNGIKLF 110
           L+PPLNFS V++G++RS +P + NFSFL++LRL++II L PEPYP+ N +FL+S  IKL+
Sbjct: 1   LVPPLNFSPVESGLYRSSYPRANNFSFLRSLRLKTIISLSPEPYPQDNLQFLESEHIKLY 60

Query: 111 QFAIEGHKEPFVNIPEDMIREALKVLLDVRNHPVLIHCKRGKHRTGCLVGCLRKLQKWCL 170
              +EG+K+PFVNIP  ++R ALK+LL+  N+PVLIHC RGKHRTG ++GCLRKLQKW L
Sbjct: 61  HIHMEGNKDPFVNIPSHLLRRALKLLLNKDNYPVLIHCNRGKHRTGLVIGCLRKLQKWSL 120

Query: 171 SSVFDEYQRFAAAKARVSDQR 191
           +S+ +EY+RF+ +KAR+ D+ 
Sbjct: 121 ASILNEYRRFSGSKARIVDEE 141

This family is closely related to the pfam00102 and pfam00782 families. Length = 150

>gnl|CDD|225240 COG2365, COG2365, Protein tyrosine/serine phosphatase [Signal transduction mechanisms]

 Score = 72.5 bits (178), Expect = 1e-15
 Identities = 42/134 (31%), Positives = 56/134 (41%), Gaps = 9/134 (6%)

Query: 54  PLNFSMVDNGI-FRSGFPDSANFS--FLQTLRLRSIIYLCPEPYPEANTEFLKSNGIKLF 110
           PLNF  +   I +RSG P         L  L L++II L        N E    + I   
Sbjct: 44  PLNFLGIIPIIDYRSGQPVPVQPDPELLDALYLKTIINL--RDESNTNVELYTDHLINWD 101

Query: 111 QFAIEGHKE----PFVNIPEDMIREALKVLLDVRNHPVLIHCKRGKHRTGCLVGCLRKLQ 166
           + AI   +     P      + + E L++L D  N PVLIHC  GK RTG +    RKL 
Sbjct: 102 KAAIIMFESYRSFPTREDAAERLVELLQLLADAENGPVLIHCTAGKDRTGLVAALYRKLV 161

Query: 167 KWCLSSVFDEYQRF 180
                +V  +Y   
Sbjct: 162 GGSDETVAADYLLT 175

Length = 249

>gnl|CDD|225297 COG2453, CDC14, Predicted protein-tyrosine phosphatase [Signal transduction mechanisms]

 Score = 38.2 bits (89), Expect = 8e-04
 Identities = 16/80 (20%), Positives = 32/80 (40%), Gaps = 10/80 (12%)

Query: 105 NGIKLFQFAIEGHKEPFV-NIPE--DMIREALKVLLDVRNHPVLIHCKRGKHRTGCLVG- 160
           +GI++    I     P + ++ +  D I EAL      +   V++HC+ G  R+G ++  
Sbjct: 71  DGIQVLHLPILDGTVPDLEDLDKIVDFIEEALS-----KGKKVVVHCQGGIGRSGTVIAA 125

Query: 161 -CLRKLQKWCLSSVFDEYQR 179
             +               +R
Sbjct: 126 YLMLYGGLSLADEAIAVKRR 145

Length = 180

>gnl|CDD|238073 cd00127, DSPc, Dual specificity phosphatases (DSP); Ser/Thr and Tyr protein phosphatases

 Score = 37.2 bits (87), Expect = 0.001
 Identities = 21/106 (19%), Positives = 40/106 (37%), Gaps = 13/106 (12%)

Query: 58  SMVDNGIFRSGFPDSANFSFLQTLRLRSIIYLCPEPYPEANTEFLKSNGIKLFQFAIEG- 116
           S +  G++   +P +++   L+ L +  ++ +  E       E L  +        I   
Sbjct: 3   SEITPGLYLGSYPAASDKELLKKLGITHVLNVAKEVPN----ENLFLSDFNYLYVPILDL 58

Query: 117 HKEPFVNI-PE--DMIREALKVLLDVRNHPVLIHCKRGKHRTGCLV 159
             +       E  D I +A +     +   VL+HC  G  R+  LV
Sbjct: 59  PSQDISKYFDEAVDFIDDARE-----KGGKVLVHCLAGVSRSATLV 99

Structurally similar to tyrosine-specific phosphatases but with a shallower active site cleft and a distinctive active site signature motif, HCxxGxxR. Characterized as VHR- or Cdc25-like. Length = 139

>gnl|CDD|222063 pfam13350, Y_phosphatase3, Tyrosine phosphatase family

 Score = 37.5 bits (88), Expect = 0.001
 Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 1/30 (3%)

Query: 127 DMIREALKVLLDVRNHPVLIHCKRGKHRTG 156
              R  L++L D  + PVL HC  GK RTG
Sbjct: 110 AAYRALLELLAD-PDGPVLFHCTAGKDRTG 138

This family is closely related to the pfam00102 and pfam00782 families. Length = 163

>gnl|CDD|214551 smart00195, DSPc, Dual specificity phosphatase, catalytic domain

 Score = 36.9 bits (86), Expect = 0.002
 Identities = 22/123 (17%), Positives = 46/123 (37%), Gaps = 12/123 (9%)

Query: 60  VDNGIFRSGFPDSANFSFLQTLRLRSIIYLCPEPYPEANTEFLKSNGIKLFQFAIEGHKE 119
           +   ++   + D+ N + L+ L +  +I +  E      ++F            +     
Sbjct: 4   ILPHLYLGSYSDALNLALLKKLGITHVINVTNEVPNYNGSDFTY--------LGVPIDDN 55

Query: 120 PFVNIPEDMIREALKVLLDVR--NHPVLIHCKRGKHRTGCLVGC-LRKLQKWCLSSVFDE 176
               I      EA++ + D       VL+HC+ G  R+  L+   L K +   L+  +D 
Sbjct: 56  TETKISPY-FPEAVEFIEDAESKGGKVLVHCQAGVSRSATLIIAYLMKTRNMSLNDAYDF 114

Query: 177 YQR 179
            + 
Sbjct: 115 VKD 117

Length = 138

>gnl|CDD|215717 pfam00102, Y_phosphatase, Protein-tyrosine phosphatase

 Score = 37.7 bits (88), Expect = 0.002
 Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 3/52 (5%)

Query: 127 DMIREALKVLLDVRNHPVLIHCKRGKHRTGCLVG---CLRKLQKWCLSSVFD 175
           D+IR+  K   D R+ P+++HC  G  RTG  +     L++L+      VF 
Sbjct: 154 DLIRKVRKSQADPRSGPIVVHCSAGVGRTGTFIAIDILLQQLEAEGEVDVFQ 205

Length = 233

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	201
PF03162	164	Y_phosphatase2: Tyrosine phosphatase family; Inter	100.0
KOG1572	249	consensus Predicted protein tyrosine phosphatase [	100.0
smart00195	138	DSPc Dual specificity phosphatase, catalytic domai	99.9
TIGR01244	135	conserved hypothetical protein TIGR01244. No membe	99.89
PF13350	164	Y_phosphatase3: Tyrosine phosphatase family; PDB:	99.89
cd00127	139	DSPc Dual specificity phosphatases (DSP); Ser/Thr	99.88
PTZ00242	166	protein tyrosine phosphatase; Provisional	99.85
PTZ00393	241	protein tyrosine phosphatase; Provisional	99.83
PF00782	133	DSPc: Dual specificity phosphatase, catalytic doma	99.82
PF04273	110	DUF442: Putative phosphatase (DUF442); InterPro: I	99.81
PRK12361	547	hypothetical protein; Provisional	99.78
PLN02727	986	NAD kinase	99.76
KOG1720	225	consensus Protein tyrosine phosphatase CDC14 [Defe	99.74
COG3453	130	Uncharacterized protein conserved in bacteria [Fun	99.72
COG2365	249	Protein tyrosine/serine phosphatase [Signal transd	99.68
PF05706	168	CDKN3: Cyclin-dependent kinase inhibitor 3 (CDKN3)	99.67
KOG1718	198	consensus Dual specificity phosphatase [Defense me	99.66
KOG1716	285	consensus Dual specificity phosphatase [Defense me	99.62
KOG1719	183	consensus Dual specificity phosphatase [Defense me	99.57
KOG1717	343	consensus Dual specificity phosphatase [Defense me	99.55
COG2453	180	CDC14 Predicted protein-tyrosine phosphatase [Sign	99.36
KOG2836	173	consensus Protein tyrosine phosphatase IVA1 [Signa	99.27
smart00012	105	PTPc_DSPc Protein tyrosine phosphatase, catalytic	99.01
smart00404	105	PTPc_motif Protein tyrosine phosphatase, catalytic	99.01
KOG2283	434	consensus Clathrin coat dissociation kinase GAK/PT	98.94
PF14566	149	PTPlike_phytase: Inositol hexakisphosphate; PDB: 1	98.91
cd00047	231	PTPc Protein tyrosine phosphatases (PTP) catalyze	98.64
smart00194	258	PTPc Protein tyrosine phosphatase, catalytic domai	98.59
PRK15375	535	pathogenicity island 1 effector protein StpP; Prov	98.4
KOG2386	393	consensus mRNA capping enzyme, guanylyltransferase	98.35
PHA02740	298	protein tyrosine phosphatase; Provisional	98.34
PHA02742	303	protein tyrosine phosphatase; Provisional	98.32
PHA02747	312	protein tyrosine phosphatase; Provisional	98.28
PHA02746	323	protein tyrosine phosphatase; Provisional	98.28
COG5350	172	Predicted protein tyrosine phosphatase [General fu	98.16
PF00102	235	Y_phosphatase: Protein-tyrosine phosphatase; Inter	98.15
PHA02738	320	hypothetical protein; Provisional	98.12
COG5599	302	PTP2 Protein tyrosine phosphatase [Signal transduc	98.08
KOG0791	374	consensus Protein tyrosine phosphatase, contains f	97.72
KOG0789	415	consensus Protein tyrosine phosphatase [Signal tra	97.58
KOG0792	1144	consensus Protein tyrosine phosphatase PTPMEG, con	97.51
KOG0790	600	consensus Protein tyrosine phosphatase Corkscrew a	97.35
KOG4228	1087	consensus Protein tyrosine phosphatase [Signal tra	97.04
cd01518	101	RHOD_YceA Member of the Rhodanese Homology Domain	95.63
cd01448	122	TST_Repeat_1 Thiosulfate sulfurtransferase (TST),	95.58
KOG0793	1004	consensus Protein tyrosine phosphatase [Signal tra	95.47
PLN02160	136	thiosulfate sulfurtransferase	95.22
cd01523	100	RHOD_Lact_B Member of the Rhodanese Homology Domai	94.49
COG0607	110	PspE Rhodanese-related sulfurtransferase [Inorgani	94.4
KOG4228	1087	consensus Protein tyrosine phosphatase [Signal tra	94.32
cd01533	109	4RHOD_Repeat_2 Member of the Rhodanese Homology Do	94.06
KOG4471	717	consensus Phosphatidylinositol 3-phosphate 3-phosp	94.05
PF06602	353	Myotub-related: Myotubularin-like phosphatase doma	93.95
cd01519	106	RHOD_HSP67B2 Member of the Rhodanese Homology Doma	93.72
PF04179	451	Init_tRNA_PT: Initiator tRNA phosphoribosyl transf	93.62
KOG1530	136	consensus Rhodanese-related sulfurtransferase [Ino	93.36
PRK01415	247	hypothetical protein; Validated	92.57
PF00581	113	Rhodanese: Rhodanese-like domain This Prosite entr	92.57
PF04343	122	DUF488: Protein of unknown function, DUF488; Inter	92.49
smart00450	100	RHOD Rhodanese Homology Domain. An alpha beta fold	92.22
PRK00142	314	putative rhodanese-related sulfurtransferase; Prov	90.78
KOG1089	573	consensus Myotubularin-related phosphatidylinosito	90.66
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	89.55
cd01527	99	RHOD_YgaP Member of the Rhodanese Homology Domain	89.01
cd01522	117	RHOD_1 Member of the Rhodanese Homology Domain sup	88.61
PF14671	141	DSPn: Dual specificity protein phosphatase, N-term	87.92
PRK05320	257	rhodanese superfamily protein; Provisional	87.43
PRK11784	345	tRNA 2-selenouridine synthase; Provisional	86.51
TIGR02981	101	phageshock_pspE phage shock operon rhodanese PspE.	86.2
cd01534	95	4RHOD_Repeat_3 Member of the Rhodanese Homology Do	85.42
cd01443	113	Cdc25_Acr2p Cdc25 enzymes are members of the Rhoda	85.12
PRK00162	108	glpE thiosulfate sulfurtransferase; Validated	83.59
PRK10287	104	thiosulfate:cyanide sulfurtransferase; Provisional	83.31
TIGR02990	239	ectoine_eutA ectoine utilization protein EutA. Mem	82.46
PRK09875	292	putative hydrolase; Provisional	82.21
cd01528	101	RHOD_2 Member of the Rhodanese Homology Domain sup	81.14
cd01531	113	Acr2p Eukaryotic arsenate resistance proteins are	80.13

>PF03162 Y_phosphatase2: Tyrosine phosphatase family; InterPro: IPR004861 Protein tyrosine (pTyr) phosphorylation is a common post-translational modification which can create novel recognition motifs for protein interactions and cellular localisation, affect protein stability, and regulate enzyme activity

Probab=100.00  E-value=6.2e-43  Score=280.39  Aligned_cols=151  Identities=52%  Similarity=0.911  Sum_probs=110.6

Q ss_pred             eeCCCCccccccceEecCCCChhhHHHHHhcCCcEEEEcCCCCCCCchHHHHhhCCcEEEEeeeCCCCCCCCCCCHHHHH
Q 028983           51 LIPPLNFSMVDNGIFRSGFPDSANFSFLQTLRLRSIIYLCPEPYPEANTEFLKSNGIKLFQFAIEGHKEPFVNIPEDMIR  130 (201)
Q Consensus        51 ~~pp~nf~~V~~~Lyrsg~p~~~~l~~L~~lGIktII~Lr~e~~~~~~~~~~~~~gi~~~~ipi~d~~~p~~~i~~~~i~  130 (201)
                      ++||.||+.|.++||||++|.+.++++|+++|+||||+|++++++.....+++++||+++|+++.....|.+.++.+.+.
T Consensus         1 lvpP~nF~~V~~~vYRS~~P~~~n~~fL~~L~LKTII~L~~e~~~~~~~~f~~~~~I~l~~~~~~~~~~~~~~~~~~~v~   80 (164)
T PF03162_consen    1 LVPPLNFGMVEPGVYRSAQPTPANFPFLERLGLKTIINLRPEPPSQDFLEFAEENGIKLIHIPMSSSKDPWVPISEEQVA   80 (164)
T ss_dssp             B---TT-EEEETTEEEESS--HHHHHHHHHHT-SEEEE--SS---HHHHHHHHHTT-EEEE-------GGG----HHHHH
T ss_pred             CcCCccccCCCCCccCCCCCChhhHHHHHHCCCceEEEecCCCCCHHHHHHHhhcCceEEEeccccccCccccCCHHHHH
Confidence            68999999999999999999999999999999999999999977777778999999999999999887766677889999


Q ss_pred             HHHHHHHccCCCcEEEEcCCCCChHHHHHHHHHHHCCCCHHHHHHHHHHHhcCCCCchhhhhHhhhcccCC
Q 028983          131 EALKVLLDVRNHPVLIHCKRGKHRTGCLVGCLRKLQKWCLSSVFDEYQRFAAAKARVSDQRGTRILSPALE  201 (201)
Q Consensus       131 ~~l~~l~~~~~~pVLVHC~aG~~RTG~vva~~l~~~g~s~~~ai~ey~~~~~~~~~~~~~~Fie~f~~~~~  201 (201)
                      ++++.++++.++||||||.+|++|||+|+||||++|||+.++|++||++|++++.+..+++|||.|+.++.
T Consensus        81 ~aL~~ild~~n~PvLiHC~~G~~rTG~vvg~lRk~Q~W~~~~i~~Ey~~f~~~~~~~~~~~fIe~f~~~~~  151 (164)
T PF03162_consen   81 EALEIILDPRNYPVLIHCNHGKDRTGLVVGCLRKLQGWSLSSIFDEYRRFAGPKIRYLDEQFIELFDVELV  151 (164)
T ss_dssp             HHHHHHH-GGG-SEEEE-SSSSSHHHHHHHHHHHHTTB-HHHHHHHHHHHHGGG--HHHHHHHHT------
T ss_pred             HHHHHHhCCCCCCEEEEeCCCCcchhhHHHHHHHHcCCCHHHHHHHHHHhcCCCCcHHHHHHHHhcCccee
Confidence            99999999899999999999999999999999999999999999999999999889999999999999873

Consequently, maintaining an appropriate level of protein tyrosine phosphorylation is essential for many cellular functions. Tyrosine-specific protein phosphatases (PTPase; 3.1.3.48 from EC) catalyse the removal of a phosphate group attached to a tyrosine residue, using a cysteinyl-phosphate enzyme intermediate. These enzymes are key regulatory components in signal transduction pathways (such as the MAP kinase pathway) and cell cycle control, and are important in the control of cell growth, proliferation, differentiation and transformation [, ]. The PTP superfamily can be divided into four subfamilies []: (1) pTyr-specific phosphatases (2) dual specificity phosphatases (dTyr and dSer/dThr) (3) Cdc25 phosphatases (dTyr and/or dThr) (4) LMW (low molecular weight) phosphatases Based on their cellular localisation, PTPases are also classified as: Receptor-like, which are transmembrane receptors that contain PTPase domains [] Non-receptor (intracellular) PTPases [] All PTPases carry the highly conserved active site motif C(X)5R (PTP signature motif), employ a common catalytic mechanism, and share a similar core structure made of a central parallel beta-sheet with flanking alpha-helices containing a beta-loop-alpha-loop that encompasses the PTP signature motif []. Functional diversity between PTPases is endowed by regulatory domains and subunits. This entry represents protein-tyrosine phosphatases predominantly from fungi, plants and bacteria, several of which are putative enzymes. These proteins are closely related to the Y-phosphatase and DSPc families. This entry includes the PTPase SIW14 from Saccharomyces cerevisiae (Baker's yeast), which plays a role in actin filament organisation and endocytosis.; PDB: 2Q47_A 1XRI_A.

>KOG1572 consensus Predicted protein tyrosine phosphatase [Defense mechanisms]

Probab=100.00  E-value=8.1e-36  Score=247.45  Aligned_cols=158  Identities=68%  Similarity=1.153  Sum_probs=150.0

Q ss_pred             CCCCCCeeeeCCCCccccccceEecCCCChhhHHHHHhcCCcEEEEcCCCCCCCchHHHHhhCCcEEEEeeeCCCC----
Q 028983           43 VVTGDEVTLIPPLNFSMVDNGIFRSGFPDSANFSFLQTLRLRSIIYLCPEPYPEANTEFLKSNGIKLFQFAIEGHK----  118 (201)
Q Consensus        43 ~~~~~~~~~~pp~nf~~V~~~Lyrsg~p~~~~l~~L~~lGIktII~Lr~e~~~~~~~~~~~~~gi~~~~ipi~d~~----  118 (201)
                      .+.+.++.++||+||++|.++|||||+|.+.++.||+.+++|+||+|+++++++....|+++++|+++|+.|.+.+    
T Consensus        46 ~~~~~~~~lipPlnFs~V~~~lyRSg~P~~~NfsFL~~L~LksIisL~pE~yp~~nl~f~~~~~Ik~~~i~ie~~k~~~k  125 (249)
T KOG1572|consen   46 NSTTGEMVLIPPLNFSMVDNGLYRSGFPRPENFSFLKTLHLKSIISLCPEPYPEENLNFLESNGIKLYQIGIEGEKDNKK  125 (249)
T ss_pred             ccCCCCceecCCccccccccceeecCCCCccchHHHHHhhhheEEEecCCCCChHHHHHHHhcCceEEEEeccccccccc
Confidence            4667788899999999999999999999999999999999999999999998887778999999999999999876    


Q ss_pred             CCCCCCCHHHHHHHHHHHHccCCCcEEEEcCCCCChHHHHHHHHHHHCCCCHHHHHHHHHHHhcCCCCchhhhhHhhhcc
Q 028983          119 EPFVNIPEDMIREALKVLLDVRNHPVLIHCKRGKHRTGCLVGCLRKLQKWCLSSVFDEYQRFAAAKARVSDQRGTRILSP  198 (201)
Q Consensus       119 ~p~~~i~~~~i~~~l~~l~~~~~~pVLVHC~aG~~RTG~vva~~l~~~g~s~~~ai~ey~~~~~~~~~~~~~~Fie~f~~  198 (201)
                      .|++.+..+.|.++++.+++..|+|+|+||..|++|||++++|++++++|+...+++||+++++++.|..+++|++.||.
T Consensus       126 ~P~~~~~~~~i~~~l~~lld~~N~P~Lihc~rGkhRtg~lVgclRklq~W~lssil~Ey~~fa~sk~r~~d~~Fie~fd~  205 (249)
T KOG1572|consen  126 EPFVNIPDHSIRKALKVLLDKRNYPILIHCKRGKHRTGCLVGCLRKLQNWSLSSILDEYLRFAGSKGRRVDLRFIEMFDT  205 (249)
T ss_pred             CCCCCChHHHHHHHHHHHhcccCCceEEecCCCCcchhhhHHHHHHHhccchhHHHHHHHHhccchhHHHHHHHHHHhcc
Confidence            88888999999999999999999999999999999999999999999999999999999999999999999999999997


Q ss_pred             cC
Q 028983          199 AL  200 (201)
Q Consensus       199 ~~  200 (201)
                      +.
T Consensus       206 ~~  207 (249)
T KOG1572|consen  206 NP  207 (249)
T ss_pred             cc
Confidence            63

>smart00195 DSPc Dual specificity phosphatase, catalytic domain

Probab=99.90  E-value=6.3e-23  Score=158.37  Aligned_cols=127  Identities=18%  Similarity=0.275  Sum_probs=99.8

Q ss_pred             cccccceEecCCCChhhHHHHHhcCCcEEEEcCCCCCCCchHHHHhhCCcEEEEeeeCCCCCCCCCCCHHHHHHHHHHHH
Q 028983           58 SMVDNGIFRSGFPDSANFSFLQTLRLRSIIYLCPEPYPEANTEFLKSNGIKLFQFAIEGHKEPFVNIPEDMIREALKVLL  137 (201)
Q Consensus        58 ~~V~~~Lyrsg~p~~~~l~~L~~lGIktII~Lr~e~~~~~~~~~~~~~gi~~~~ipi~d~~~p~~~i~~~~i~~~l~~l~  137 (201)
                      ..|.++||+|++|...++++|+++||++||||+.+....      ...|++|+++|+.|...+  .+ .+.+.++++++.
T Consensus         2 ~~I~~~l~~G~~~~~~~~~~l~~~gi~~Vi~l~~~~~~~------~~~~~~~~~ipi~D~~~~--~~-~~~~~~~~~~i~   72 (138)
T smart00195        2 SEILPHLYLGSYSSALNLALLKKLGITHVINVTNEVPNL------NKKGFTYLGVPILDNTET--KI-SPYFPEAVEFIE   72 (138)
T ss_pred             cEEeCCeEECChhHcCCHHHHHHcCCCEEEEccCCCCCC------CCCCCEEEEEECCCCCCC--Ch-HHHHHHHHHHHH
Confidence            367899999999999999999999999999999874321      246899999999984322  11 345555555554


Q ss_pred             c--cCCCcEEEEcCCCCChHHHHHHHHHHH-CCCCHHHHHHHHHHHhcCCCCchhhhhHhh
Q 028983          138 D--VRNHPVLIHCKRGKHRTGCLVGCLRKL-QKWCLSSVFDEYQRFAAAKARVSDQRGTRI  195 (201)
Q Consensus       138 ~--~~~~pVLVHC~aG~~RTG~vva~~l~~-~g~s~~~ai~ey~~~~~~~~~~~~~~Fie~  195 (201)
                      .  ..++||||||.+|.+|||+++++|++. .||+.++|++.++.. ++.+. .+..|+..
T Consensus        73 ~~~~~~~~VlVHC~~G~~RS~~v~~~yl~~~~~~~~~~A~~~v~~~-R~~~~-p~~~~~~q  131 (138)
T smart00195       73 DAEKKGGKVLVHCQAGVSRSATLIIAYLMKYRNLSLNDAYDFVKDR-RPIIS-PNFGFLRQ  131 (138)
T ss_pred             HHhcCCCeEEEECCCCCchHHHHHHHHHHHHhCCCHHHHHHHHHHH-CCccC-CCHhHHHH
Confidence            3  468999999999999999999999885 799999999977755 66564 46777654

>TIGR01244 conserved hypothetical protein TIGR01244

Probab=99.89  E-value=3.3e-22  Score=155.45  Aligned_cols=117  Identities=15%  Similarity=0.193  Sum_probs=96.1

Q ss_pred             ccccccceEecCCCChhhHHHHHhcCCcEEEEcCCC-CCCC-----chHHHHhhCCcEEEEeeeCCCCCCCCCCCHHHHH
Q 028983           57 FSMVDNGIFRSGFPDSANFSFLQTLRLRSIIYLCPE-PYPE-----ANTEFLKSNGIKLFQFAIEGHKEPFVNIPEDMIR  130 (201)
Q Consensus        57 f~~V~~~Lyrsg~p~~~~l~~L~~lGIktII~Lr~e-~~~~-----~~~~~~~~~gi~~~~ipi~d~~~p~~~i~~~~i~  130 (201)
                      +..|.+.+|+|++|++.+++.|+++||++|||||++ +...     .+..++...|++|+|+|+....     ++.+.+.
T Consensus         2 ~~~i~~~~~~s~qlt~~d~~~L~~~GiktVIdlR~~~E~~~~p~~~~~~~~a~~~gl~y~~iPv~~~~-----~~~~~v~   76 (135)
T TIGR01244         2 IRKLTEHLYVSPQLTKADAAQAAQLGFKTVINNRPDREEESQPDFAQIKAAAEAAGVTYHHQPVTAGD-----ITPDDVE   76 (135)
T ss_pred             ceEcCCCeeEcCCCCHHHHHHHHHCCCcEEEECCCCCCCCCCCCHHHHHHHHHHCCCeEEEeecCCCC-----CCHHHHH
Confidence            457889999999999999999999999999999986 2211     1234566789999999998642     3467777


Q ss_pred             HHHHHHHccCCCcEEEEcCCCCChHHHHHHHHHHHCCCCHHHHHHHHHHH
Q 028983          131 EALKVLLDVRNHPVLIHCKRGKHRTGCLVGCLRKLQKWCLSSVFDEYQRF  180 (201)
Q Consensus       131 ~~l~~l~~~~~~pVLVHC~aG~~RTG~vva~~l~~~g~s~~~ai~ey~~~  180 (201)
                      .+.+.+. ..++|||+||++|+ |||+++++++...|++.++|+++.+..
T Consensus        77 ~f~~~~~-~~~~pvL~HC~sG~-Rt~~l~al~~~~~g~~~~~i~~~~~~~  124 (135)
T TIGR01244        77 TFRAAIG-AAEGPVLAYCRSGT-RSSLLWGFRQAAEGVPVEEIVRRAQAA  124 (135)
T ss_pred             HHHHHHH-hCCCCEEEEcCCCh-HHHHHHHHHHHHcCCCHHHHHHHHHHc
Confidence            6666654 46899999999999 999999999999999999999977644

No member of this family is characterized. The member from Xylella fastidiosa is a longer protein with an N-terminal region described by this model, followed by a metallo-beta-lactamase family domain and an additional C-terminal region. Members scoring above the trusted cutoff are limited to the proteobacteria.

>PF13350 Y_phosphatase3: Tyrosine phosphatase family; PDB: 1YWF_A 2OZ5_B

Probab=99.89  E-value=6.1e-23  Score=163.84  Aligned_cols=121  Identities=26%  Similarity=0.386  Sum_probs=78.3

Q ss_pred             cccccc-eEecCCCC---hhhHHHHHhcCCcEEEEcCCCCCCCchHHHHhhCCcEEEEeeeCCCCCC-------------
Q 028983           58 SMVDNG-IFRSGFPD---SANFSFLQTLRLRSIIYLCPEPYPEANTEFLKSNGIKLFQFAIEGHKEP-------------  120 (201)
Q Consensus        58 ~~V~~~-Lyrsg~p~---~~~l~~L~~lGIktII~Lr~e~~~~~~~~~~~~~gi~~~~ipi~d~~~p-------------  120 (201)
                      ..|.+| ||||+.+.   +++++.|.++||++|||||.+....... -....|++++++|+.+....             
T Consensus        14 ~~ir~g~lyRS~~l~~lt~~d~~~L~~lgI~tIiDLRs~~E~~~~p-~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~   92 (164)
T PF13350_consen   14 RRIRPGRLYRSGNLSNLTEADLERLRELGIRTIIDLRSPTERERAP-DPLIDGVQYVHIPIFGDDASSPDKLAELLQSSA   92 (164)
T ss_dssp             -TS-TTSEEEES--TT--HHHHHHHHHTT--EEEE-S-HHHHHHHS-----TT-EEEE--SS-S-TTH----------HH
T ss_pred             eeecCCcEEecCCcCcCCHHHHHHHHhCCCCEEEECCCccccccCC-CCCcCCceeeeeccccccccccccccccccccc
Confidence            467777 99999987   6789999999999999999862100000 01124999999999875332             


Q ss_pred             ------------CCCCCHHHHHHHHHHHHccCCCcEEEEcCCCCChHHHHHHHHHHHCCCCHHHHHHHHHHH
Q 028983          121 ------------FVNIPEDMIREALKVLLDVRNHPVLIHCKRGKHRTGCLVGCLRKLQKWCLSSVFDEYQRF  180 (201)
Q Consensus       121 ------------~~~i~~~~i~~~l~~l~~~~~~pVLVHC~aG~~RTG~vva~~l~~~g~s~~~ai~ey~~~  180 (201)
                                  .+....+.+.++++.|.+.. +|+||||++||||||+++|++|...|++.++|++||.+.
T Consensus        93 ~~~~~~~~~Y~~~~~~~~~~~~~~~~~l~~~~-~p~l~HC~aGKDRTG~~~alll~~lGV~~~~I~~DY~lS  163 (164)
T PF13350_consen   93 DAPRGMLEFYREMLESYAEAYRKIFELLADAP-GPVLFHCTAGKDRTGVVAALLLSLLGVPDEDIIADYLLS  163 (164)
T ss_dssp             HHHHHHHHHHHHGGGSTHHHHHHHHHHHH-TT---EEEE-SSSSSHHHHHHHHHHHHTT--HHHHHHHHHGG
T ss_pred             chhhHHHHHHHHHHHhhhHHHHHHHHHhccCC-CcEEEECCCCCccHHHHHHHHHHHcCCCHHHHHHHHHhc
Confidence                        01122577899999998755 799999999999999999999999999999999999975

>cd00127 DSPc Dual specificity phosphatases (DSP); Ser/Thr and Tyr protein phosphatases

Probab=99.88  E-value=3e-22  Score=153.87  Aligned_cols=130  Identities=18%  Similarity=0.240  Sum_probs=101.4

Q ss_pred             ccccccceEecCCCChhhHHHHHhcCCcEEEEcCCCCCCCchHHHHhhCCcEEEEeeeCCCCCCCCCCCHHHHHHHHHHH
Q 028983           57 FSMVDNGIFRSGFPDSANFSFLQTLRLRSIIYLCPEPYPEANTEFLKSNGIKLFQFAIEGHKEPFVNIPEDMIREALKVL  136 (201)
Q Consensus        57 f~~V~~~Lyrsg~p~~~~l~~L~~lGIktII~Lr~e~~~~~~~~~~~~~gi~~~~ipi~d~~~p~~~i~~~~i~~~l~~l  136 (201)
                      ..+|.++||.|++|...+.++|+++||++||||+.+...    ......|++|+|+|+.|...+.  + ...+..+++++
T Consensus         2 ~~~i~~~l~~g~~~~~~d~~~L~~~gi~~VI~l~~~~~~----~~~~~~~~~~~~~~~~D~~~~~--~-~~~~~~~~~~i   74 (139)
T cd00127           2 LSEITPGLYLGSYPAASDKELLKKLGITHVLNVAKEVPN----ENLFLSDFNYLYVPILDLPSQD--I-SKYFDEAVDFI   74 (139)
T ss_pred             cCEEcCCeEECChhHhcCHHHHHHcCCCEEEEcccCCCC----cccCCCCceEEEEEceeCCCCC--h-HHHHHHHHHHH
Confidence            457889999999999999999999999999999987542    2233579999999999876442  1 34444455554


Q ss_pred             Hc--cCCCcEEEEcCCCCChHHHHHHHHHH-HCCCCHHHHHHHHHHHhcCCCCchhhhhHhh
Q 028983          137 LD--VRNHPVLIHCKRGKHRTGCLVGCLRK-LQKWCLSSVFDEYQRFAAAKARVSDQRGTRI  195 (201)
Q Consensus       137 ~~--~~~~pVLVHC~aG~~RTG~vva~~l~-~~g~s~~~ai~ey~~~~~~~~~~~~~~Fie~  195 (201)
                      ..  ..++||||||.+|.+|||+++++|++ ..+|+.++|++.++.. ++... .++.|.++
T Consensus        75 ~~~~~~~~~vlVHC~~G~~Rs~~~~~~~l~~~~~~~~~~a~~~vr~~-r~~~~-~~~~~~~~  134 (139)
T cd00127          75 DDAREKGGKVLVHCLAGVSRSATLVIAYLMKTLGLSLREAYEFVKSR-RPIIS-PNAGFMRQ  134 (139)
T ss_pred             HHHHhcCCcEEEECCCCCchhHHHHHHHHHHHcCCCHHHHHHHHHHH-CCccC-CCHHHHHH
Confidence            33  35789999999999999999988887 5799999999987765 65554 46666654

Structurally similar to tyrosine-specific phosphatases but with a shallower active site cleft and a distinctive active site signature motif, HCxxGxxR. Characterized as VHR- or Cdc25-like.

>PTZ00242 protein tyrosine phosphatase; Provisional

Probab=99.85  E-value=3.2e-20  Score=149.10  Aligned_cols=136  Identities=16%  Similarity=0.213  Sum_probs=106.8

Q ss_pred             CccccccceEecCCCCh----hhHHHHHhcCCcEEEEcCCCCCCCchHHHHhhCCcEEEEeeeCCCCCCCCCCCHHHHHH
Q 028983           56 NFSMVDNGIFRSGFPDS----ANFSFLQTLRLRSIIYLCPEPYPEANTEFLKSNGIKLFQFAIEGHKEPFVNIPEDMIRE  131 (201)
Q Consensus        56 nf~~V~~~Lyrsg~p~~----~~l~~L~~lGIktII~Lr~e~~~~~~~~~~~~~gi~~~~ipi~d~~~p~~~i~~~~i~~  131 (201)
                      ...+|...+.....|..    .+++.|+++||++||+++.+.++   .+.++..|+.|+++|+.|...|.    .+.+.+
T Consensus        10 ~~~~~~~r~~~~~~P~~~~~~~~l~~L~~~gI~~Iv~l~~~~~~---~~~~~~~gi~~~~~p~~D~~~P~----~~~i~~   82 (166)
T PTZ00242         10 QIEYVLFKFLILDAPSPSNLPLYIKELQRYNVTHLVRVCGPTYD---AELLEKNGIEVHDWPFDDGAPPP----KAVIDN   82 (166)
T ss_pred             ceeeeceEEEEecCCCcccHHHHHHHHHhCCCeEEEecCCCCCC---HHHHHHCCCEEEecCCCCCCCCC----HHHHHH
Confidence            46677888888888886    45688999999999999876442   34667789999999999987774    555655


Q ss_pred             HHHHHHc------cCCCcEEEEcCCCCChHHHHHHHHHHHC-CCCHHHHHHHHHHHhcCCCCchhhhhHhhhcc
Q 028983          132 ALKVLLD------VRNHPVLIHCKRGKHRTGCLVGCLRKLQ-KWCLSSVFDEYQRFAAAKARVSDQRGTRILSP  198 (201)
Q Consensus       132 ~l~~l~~------~~~~pVLVHC~aG~~RTG~vva~~l~~~-g~s~~~ai~ey~~~~~~~~~~~~~~Fie~f~~  198 (201)
                      +++.+.+      ..+++|+|||.+|.||||+++++||+.. +|+.++|++.++...+......|.+|+..|.-
T Consensus        83 ~~~~i~~~~~~~~~~g~~V~VHC~aGigRSgt~~a~yL~~~~~~s~~eAi~~vr~~R~~~i~~~Q~~~l~~~~~  156 (166)
T PTZ00242         83 WLRLLDQEFAKQSTPPETIAVHCVAGLGRAPILVALALVEYGGMEPLDAVGFVREKRKGAINQTQLQFLKKYKP  156 (166)
T ss_pred             HHHHHHHHHHhhccCCCeEEEECCCCCCHHHHHHHHHHHHhCCCCHHHHHHHHHHHCCCCchHHHHHHHHHHHH
Confidence            6655532      2489999999999999999999999965 59999999988877433334468889988864

>PTZ00393 protein tyrosine phosphatase; Provisional

Probab=99.83  E-value=2.6e-19  Score=150.49  Aligned_cols=127  Identities=14%  Similarity=0.183  Sum_probs=103.9

Q ss_pred             eEecCCCCh----hhHHHHHhcCCcEEEEcCCCCCCCchHHHHhhCCcEEEEeeeCCCCCCCCCCCHHHHHHHHHHHHc-
Q 028983           64 IFRSGFPDS----ANFSFLQTLRLRSIIYLCPEPYPEANTEFLKSNGIKLFQFAIEGHKEPFVNIPEDMIREALKVLLD-  138 (201)
Q Consensus        64 Lyrsg~p~~----~~l~~L~~lGIktII~Lr~e~~~~~~~~~~~~~gi~~~~ipi~d~~~p~~~i~~~~i~~~l~~l~~-  138 (201)
                      +..-..|+.    ..++.|+++||++||+++...|+   .+.++..||+|+++|+.|...|.    .+.+.++++++.. 
T Consensus        94 fLi~~~P~~~~~~~yl~eLk~~gV~~lVrlcE~~Yd---~~~~~~~GI~~~~lpipDg~aPs----~~~i~~~l~~i~~~  166 (241)
T PTZ00393         94 ILILDAPTNDLLPLYIKEMKNYNVTDLVRTCERTYN---DGEITSAGINVHELIFPDGDAPT----VDIVSNWLTIVNNV  166 (241)
T ss_pred             EEEeCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCC---HHHHHHcCCeEEEeecCCCCCCC----HHHHHHHHHHHHHH
Confidence            556677775    45688999999999999987653   34567889999999999998885    5677777777643 


Q ss_pred             -cCCCcEEEEcCCCCChHHHHHHHHHHHCCCCHHHHHHHHHHHhcCCC-CchhhhhHhhhcc
Q 028983          139 -VRNHPVLIHCKRGKHRTGCLVGCLRKLQKWCLSSVFDEYQRFAAAKA-RVSDQRGTRILSP  198 (201)
Q Consensus       139 -~~~~pVLVHC~aG~~RTG~vva~~l~~~g~s~~~ai~ey~~~~~~~~-~~~~~~Fie~f~~  198 (201)
                       ..+++|+|||.+|.||||+++|+||+..|++.++|++.++.. ++.+ ...|.+|++.|.-
T Consensus       167 l~~g~~VaVHC~AGlGRTGtl~AayLI~~GmspeeAI~~VR~~-RPgAIn~~Q~~fL~~y~~  227 (241)
T PTZ00393        167 IKNNRAVAVHCVAGLGRAPVLASIVLIEFGMDPIDAIVFIRDR-RKGAINKRQLQFLKAYKK  227 (241)
T ss_pred             HhcCCeEEEECCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHH-CCCCCCHHHHHHHHHHHH
Confidence             368899999999999999999999999999999999988766 5544 4579999998863

>PF00782 DSPc: Dual specificity phosphatase, catalytic domain; InterPro: IPR000340 Protein tyrosine (pTyr) phosphorylation is a common post-translational modification which can create novel recognition motifs for protein interactions and cellular localisation, affect protein stability, and regulate enzyme activity

Probab=99.82  E-value=1.3e-19  Score=138.62  Aligned_cols=122  Identities=20%  Similarity=0.398  Sum_probs=93.8

Q ss_pred             eEecCCCChhhHHHHHhcCCcEEEEcCCCCCCCchHHHHhhCCcEEEEeeeCCC-CCCCCCCCHHHHHHHHHHHHc--cC
Q 028983           64 IFRSGFPDSANFSFLQTLRLRSIIYLCPEPYPEANTEFLKSNGIKLFQFAIEGH-KEPFVNIPEDMIREALKVLLD--VR  140 (201)
Q Consensus        64 Lyrsg~p~~~~l~~L~~lGIktII~Lr~e~~~~~~~~~~~~~gi~~~~ipi~d~-~~p~~~i~~~~i~~~l~~l~~--~~  140 (201)
                      ||.|+.+... ..+|+++||++|||++.+....   ...+..++.|+++|+.|. ..+.    .+.+.++.++|.+  ..
T Consensus         1 lylG~~~~a~-~~~l~~~~I~~Vin~~~~~~~~---~~~~~~~~~~~~i~~~D~~~~~~----~~~~~~~~~~i~~~~~~   72 (133)
T PF00782_consen    1 LYLGSYPAAS-IAFLKNLGITHVINLQEECPNP---YFYKPEGIEYLRIPIDDDPEEPI----LEHLDQAVEFIENAISE   72 (133)
T ss_dssp             EEEEEHHHHC-HHHHHHTTEEEEEECSSSSSTS---HHHTTTTSEEEEEEEESSTTSHG----GGGHHHHHHHHHHHHHT
T ss_pred             CEEeCHHHHh-HHHHHHCCCCEEEEccCCCcCc---hhcccCCCEEEEEEecCCCCcch----HHHHHHHHHhhhhhhcc
Confidence            6999999988 9999999999999999874322   345567999999999983 3322    2344444444433  46


Q ss_pred             CCcEEEEcCCCCChHHHHHHHHHHH-CCCCHHHHHHHHHHHhcCCCCchhhhhHhh
Q 028983          141 NHPVLIHCKRGKHRTGCLVGCLRKL-QKWCLSSVFDEYQRFAAAKARVSDQRGTRI  195 (201)
Q Consensus       141 ~~pVLVHC~aG~~RTG~vva~~l~~-~g~s~~~ai~ey~~~~~~~~~~~~~~Fie~  195 (201)
                      +++|||||.+|.+|||+++++||+. .||+.++|++.++.. ++... .+..|++.
T Consensus        73 ~~~VlVHC~~G~~RS~~v~~ayLm~~~~~~~~~A~~~v~~~-rp~~~-~~~~~~~~  126 (133)
T PF00782_consen   73 GGKVLVHCKAGLSRSGAVAAAYLMKKNGMSLEEAIEYVRSR-RPQIN-PNPSFIRQ  126 (133)
T ss_dssp             TSEEEEEESSSSSHHHHHHHHHHHHHHTSSHHHHHHHHHHH-STTST-HHHHHHHH
T ss_pred             cceeEEEeCCCcccchHHHHHHHHHHcCCCHHHHHHHHHHH-CCCCC-CCHHHHHH
Confidence            8999999999999999999999995 699999999977655 66564 45555543

Consequently, maintaining an appropriate level of protein tyrosine phosphorylation is essential for many cellular functions. Tyrosine-specific protein phosphatases (PTPase; 3.1.3.48 from EC) catalyse the removal of a phosphate group attached to a tyrosine residue, using a cysteinyl-phosphate enzyme intermediate. These enzymes are key regulatory components in signal transduction pathways (such as the MAP kinase pathway) and cell cycle control, and are important in the control of cell growth, proliferation, differentiation and transformation [, ]. The PTP superfamily can be divided into four subfamilies []: (1) pTyr-specific phosphatases (2) dual specificity phosphatases (dTyr and dSer/dThr) (3) Cdc25 phosphatases (dTyr and/or dThr) (4) LMW (low molecular weight) phosphatases Based on their cellular localisation, PTPases are also classified as: Receptor-like, which are transmembrane receptors that contain PTPase domains [] Non-receptor (intracellular) PTPases [] All PTPases carry the highly conserved active site motif C(X)5R (PTP signature motif), employ a common catalytic mechanism, and share a similar core structure made of a central parallel beta-sheet with flanking alpha-helices containing a beta-loop-alpha-loop that encompasses the PTP signature motif []. Functional diversity between PTPases is endowed by regulatory domains and subunits. This entry represents dual specificity protein-tyrosine phosphatases. Ser/Thr and Tyr dual specificity phosphatases are a group of enzymes with both Ser/Thr (3.1.3.16 from EC) and tyrosine specific protein phosphatase (3.1.3.48 from EC) activity able to remove both the serine/threonine or tyrosine-bound phosphate group from a wide range of phosphoproteins, including a number of enzymes which have been phosphorylated under the action of a kinase. Dual specificity protein phosphatases (DSPs) regulate mitogenic signal transduction and control the cell cycle. The crystal structure of a human DSP, vaccinia H1-related phosphatase (or VHR), has been determined at 2.1 angstrom resolution []. A shallow active site pocket in VHR allows for the hydrolysis of phosphorylated serine, threonine, or tyrosine protein residues, whereas the deeper active site of protein tyrosine phosphatases (PTPs) restricts substrate specificity to only phosphotyrosine. Positively charged crevices near the active site may explain the enzyme's preference for substrates with two phosphorylated residues. The VHR structure defines a conserved structural scaffold for both DSPs and PTPs. A "recognition region" connecting helix alpha1 to strand beta1, may determine differences in substrate specificity between VHR, the PTPs, and other DSPs. These proteins may also have inactive phosphatase domains, and dependent on the domain composition this loss of catalytic activity has different effects on protein function. Inactive single domain phosphatases can still specifically bind substrates, and protect again dephosphorylation, while the inactive domains of tandem phosphatases can be further subdivided into two classes. Those which bind phosphorylated tyrosine residues may recruit multi-phosphorylated substrates for the adjacent active domains and are more conserved, while the other class have accumulated several variable amino acid substitutions and have a complete loss of tyrosine binding capability. The second class shows a release of evolutionary constraint for the sites around the catalytic centre, which emphasises a difference in function from the first group. There is a region of higher conservation common to both classes, suggesting a new regulatory centre [].; GO: 0008138 protein tyrosine/serine/threonine phosphatase activity, 0006470 protein dephosphorylation; PDB: 2G6Z_A 1MKP_A 1YZ4_A 2P4D_A 1M3G_A 1ZZW_A 2OUD_A 2HXP_A 3LJ8_A 1OHD_A ....

>PF04273 DUF442: Putative phosphatase (DUF442); InterPro: IPR005939 Although this domain is uncharacterised it seems likely that it performs a phosphatase function

Probab=99.81  E-value=1e-19  Score=137.06  Aligned_cols=101  Identities=21%  Similarity=0.422  Sum_probs=71.6

Q ss_pred             ccccccceEecCCCChhhHHHHHhcCCcEEEEcCCC-CCC-----CchHHHHhhCCcEEEEeeeCCCCCCCCCCCHHHHH
Q 028983           57 FSMVDNGIFRSGFPDSANFSFLQTLRLRSIIYLCPE-PYP-----EANTEFLKSNGIKLFQFAIEGHKEPFVNIPEDMIR  130 (201)
Q Consensus        57 f~~V~~~Lyrsg~p~~~~l~~L~~lGIktII~Lr~e-~~~-----~~~~~~~~~~gi~~~~ipi~d~~~p~~~i~~~~i~  130 (201)
                      |..|++.+|.|++|++.+++.|++.|+|||||||++ +.+     ..+.+.++..|++|+|+|+...     .++.+.+.
T Consensus         2 i~~i~~~~~vs~Q~~~~d~~~la~~GfktVInlRpd~E~~~qp~~~~~~~~a~~~Gl~y~~iPv~~~-----~~~~~~v~   76 (110)
T PF04273_consen    2 IRQISDDLSVSGQPSPEDLAQLAAQGFKTVINLRPDGEEPGQPSSAEEAAAAEALGLQYVHIPVDGG-----AITEEDVE   76 (110)
T ss_dssp             -EEEETTEEEECS--HHHHHHHHHCT--EEEE-S-TTSTTT-T-HHCHHHHHHHCT-EEEE----TT-----T--HHHHH
T ss_pred             CEecCCCeEECCCCCHHHHHHHHHCCCcEEEECCCCCCCCCCCCHHHHHHHHHHcCCeEEEeecCCC-----CCCHHHHH
Confidence            678899999999999999999999999999999987 211     2356788999999999999975     23478888


Q ss_pred             HHHHHHHccCCCcEEEEcCCCCChHHHHHHHHHH
Q 028983          131 EALKVLLDVRNHPVLIHCKRGKHRTGCLVGCLRK  164 (201)
Q Consensus       131 ~~l~~l~~~~~~pVLVHC~aG~~RTG~vva~~l~  164 (201)
                      .+.+.+.. .++|||+||++|. |++.++++...
T Consensus        77 ~f~~~l~~-~~~Pvl~hC~sG~-Ra~~l~~l~~~  108 (110)
T PF04273_consen   77 AFADALES-LPKPVLAHCRSGT-RASALWALAQA  108 (110)
T ss_dssp             HHHHHHHT-TTTSEEEE-SCSH-HHHHHHHHHHH
T ss_pred             HHHHHHHh-CCCCEEEECCCCh-hHHHHHHHHhh
Confidence            77777654 6899999999997 99998887653

; GO: 0016787 hydrolase activity; PDB: 2F46_A 3GXH_B 3GXG_B.

>PRK12361 hypothetical protein; Provisional

Probab=99.78  E-value=2.3e-18  Score=160.74  Aligned_cols=134  Identities=16%  Similarity=0.244  Sum_probs=106.1

Q ss_pred             CccccccceEecCCCChhhHHHHHhcCCcEEEEcCCCCCCCchHHHHhhCCcEEEEeeeCCCCCCCCCCCHHHHHHHHHH
Q 028983           56 NFSMVDNGIFRSGFPDSANFSFLQTLRLRSIIYLCPEPYPEANTEFLKSNGIKLFQFAIEGHKEPFVNIPEDMIREALKV  135 (201)
Q Consensus        56 nf~~V~~~Lyrsg~p~~~~l~~L~~lGIktII~Lr~e~~~~~~~~~~~~~gi~~~~ipi~d~~~p~~~i~~~~i~~~l~~  135 (201)
                      .+..|.|+||.|+.|.+.+++.|+++||++||||+.+... . .......+++|+++|+.|...|.    .+++.+++++
T Consensus        94 ~~~~I~~~l~lG~~~~a~d~~~L~~~gI~~Vldlt~E~~~-~-~~~~~~~~i~yl~iPi~D~~~p~----~~~l~~a~~~  167 (547)
T PRK12361         94 AIQKIDENLYLGCRLFPADLEKLKSNKITAILDVTAEFDG-L-DWSLTEEDIDYLNIPILDHSVPT----LAQLNQAINW  167 (547)
T ss_pred             cceEEcCcEEECCCCCcccHHHHHHcCCCEEEEccccccc-c-cccccccCceEEEeecCCCCCCc----HHHHHHHHHH
Confidence            4788999999999999999999999999999999976211 1 01112358999999999987764    5778888888


Q ss_pred             HHc--cCCCcEEEEcCCCCChHHHHHHHHHHH--CCCCHHHHHHHHHHHhcCCCCc--hhhhhHhhh
Q 028983          136 LLD--VRNHPVLIHCKRGKHRTGCLVGCLRKL--QKWCLSSVFDEYQRFAAAKARV--SDQRGTRIL  196 (201)
Q Consensus       136 l~~--~~~~pVLVHC~aG~~RTG~vva~~l~~--~g~s~~~ai~ey~~~~~~~~~~--~~~~Fie~f  196 (201)
                      |.+  ..+++|||||++|.+||++++++||+.  .+|+.++|++..+.. |+.++.  .+.+.++.|
T Consensus       168 i~~~~~~~~~VlVHC~~G~sRSa~vv~ayLm~~~~~~~~~eA~~~vr~~-Rp~v~~n~~q~~~l~~~  233 (547)
T PRK12361        168 IHRQVRANKSVVVHCALGRGRSVLVLAAYLLCKDPDLTVEEVLQQIKQI-RKTARLNKRQLRALEKM  233 (547)
T ss_pred             HHHHHHCCCeEEEECCCCCCcHHHHHHHHHHHhccCCCHHHHHHHHHHH-CCCCCCCHHHHHHHHHH
Confidence            765  357999999999999999999999995  389999999977755 665643  445555444

>PLN02727 NAD kinase

Probab=99.76  E-value=3e-18  Score=164.72  Aligned_cols=102  Identities=19%  Similarity=0.345  Sum_probs=87.9

Q ss_pred             ceEecCCCChhhHHHHHhcCCcEEEEcCCCCC-----CCchHHHHhhCCcEEEEeeeCCCCCCCCCCCHHHHHHHHHHHH
Q 028983           63 GIFRSGFPDSANFSFLQTLRLRSIIYLCPEPY-----PEANTEFLKSNGIKLFQFAIEGHKEPFVNIPEDMIREALKVLL  137 (201)
Q Consensus        63 ~Lyrsg~p~~~~l~~L~~lGIktII~Lr~e~~-----~~~~~~~~~~~gi~~~~ipi~d~~~p~~~i~~~~i~~~l~~l~  137 (201)
                      .+|||+||++++++.|.+.|||||||||++..     ...+.+.+++.|++|+|+|+.+...|.    .++|.++.+.+.
T Consensus       262 ~~~rsgQpspe~la~LA~~GfKTIINLRpd~E~~q~~~~ee~eAae~~GL~yVhIPVs~~~apt----~EqVe~fa~~l~  337 (986)
T PLN02727        262 AFWRGGQVTEEGLKWLLEKGFKTIVDLRAEIVKDNFYQAAVDDAISSGKIEVVKIPVEVRTAPS----AEQVEKFASLVS  337 (986)
T ss_pred             eEEEeCCCCHHHHHHHHHCCCeEEEECCCCCcCCCchhHHHHHHHHHcCCeEEEeecCCCCCCC----HHHHHHHHHHHH
Confidence            48999999999999999999999999999732     123667788899999999998866664    789998888885


Q ss_pred             ccCCCcEEEEcCCCCChHHHHHHHHHHHC-CC
Q 028983          138 DVRNHPVLIHCKRGKHRTGCLVGCLRKLQ-KW  168 (201)
Q Consensus       138 ~~~~~pVLVHC~aG~~RTG~vva~~l~~~-g~  168 (201)
                      +..++|||+||++|.+|||+|+|||+.+. +.
T Consensus       338 ~slpkPVLvHCKSGarRAGamvA~yl~~~~~~  369 (986)
T PLN02727        338 DSSKKPIYLHSKEGVWRTSAMVSRWKQYMTRS  369 (986)
T ss_pred             hhcCCCEEEECCCCCchHHHHHHHHHHHHccc
Confidence            66799999999999999999999999953 44

>KOG1720 consensus Protein tyrosine phosphatase CDC14 [Defense mechanisms]

Probab=99.74  E-value=2.5e-17  Score=135.11  Aligned_cols=132  Identities=16%  Similarity=0.292  Sum_probs=102.6

Q ss_pred             CCeeeeCCCCccccccc-eEecCCCC------------h---hhHHHHHhcCCcEEEEcCCCCCCCchHHHHhhCCcEEE
Q 028983           47 DEVTLIPPLNFSMVDNG-IFRSGFPD------------S---ANFSFLQTLRLRSIIYLCPEPYPEANTEFLKSNGIKLF  110 (201)
Q Consensus        47 ~~~~~~pp~nf~~V~~~-Lyrsg~p~------------~---~~l~~L~~lGIktII~Lr~e~~~~~~~~~~~~~gi~~~  110 (201)
                      ++..-+++.+|.||.|+ +.+=..|.            .   .-+.++++..+++|+-|...-|+   ++.+...||.++
T Consensus        43 e~ye~ve~gdfnwI~p~~~i~f~~p~~~s~gi~~~f~~~~~~~~~~~~~~~~v~s~vrln~~~yd---~~~f~~~Gi~h~  119 (225)
T KOG1720|consen   43 EHYEAVENGDFNWIIPDRFIAFAGPHLKSRGIESGFPLHLPQPYIQYFKNNNVTSIVRLNKRLYD---AKRFTDAGIDHH  119 (225)
T ss_pred             eeeeccCCCCcceeccchhhhhcCccccccchhhcccccCChhHHHHhhhcccceEEEcCCCCCC---hHHhcccCceee
Confidence            44556778889999888 22222221            1   12477888999999999987654   455677899999


Q ss_pred             EeeeCCCCCCCCCCCHHHHHHHHHHHHc-cCCCcEEEEcCCCCChHHHHHHHHHHHC-CCCHHHHHHHHHHHhcCCCC
Q 028983          111 QFAIEGHKEPFVNIPEDMIREALKVLLD-VRNHPVLIHCKRGKHRTGCLVGCLRKLQ-KWCLSSVFDEYQRFAAAKAR  186 (201)
Q Consensus       111 ~ipi~d~~~p~~~i~~~~i~~~l~~l~~-~~~~pVLVHC~aG~~RTG~vva~~l~~~-g~s~~~ai~ey~~~~~~~~~  186 (201)
                      ++|+.|...|.    .+.+.++++++.+ .+.+.|.|||++|.||||+++|||||+. |++..++++..+.. ||++.
T Consensus       120 ~l~f~Dg~tP~----~~~v~~fv~i~e~~~~~g~iaVHCkaGlGRTG~liAc~lmy~~g~ta~eaI~~lR~~-RpG~V  192 (225)
T KOG1720|consen  120 DLFFADGSTPT----DAIVKEFVKIVENAEKGGKIAVHCKAGLGRTGTLIACYLMYEYGMTAGEAIAWLRIC-RPGAV  192 (225)
T ss_pred             eeecCCCCCCC----HHHHHHHHHHHHHHHhcCeEEEEeccCCCchhHHHHHHHHHHhCCCHHHHHHHHHhc-CCccc
Confidence            99999998885    6788888888754 2379999999999999999999999975 99999999976655 67663

>COG3453 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=99.72  E-value=1.2e-16  Score=120.54  Aligned_cols=113  Identities=20%  Similarity=0.259  Sum_probs=95.3

Q ss_pred             CccccccceEecCCCChhhHHHHHhcCCcEEEEcCCC--CC----CCchHHHHhhCCcEEEEeeeCCCCCCCCCCCHHHH
Q 028983           56 NFSMVDNGIFRSGFPDSANFSFLQTLRLRSIIYLCPE--PY----PEANTEFLKSNGIKLFQFAIEGHKEPFVNIPEDMI  129 (201)
Q Consensus        56 nf~~V~~~Lyrsg~p~~~~l~~L~~lGIktII~Lr~e--~~----~~~~~~~~~~~gi~~~~ipi~d~~~p~~~i~~~~i  129 (201)
                      .+..|.+.|+.|+|++.+++..++.+|+|+|||.|++  +.    ...+..+++..|+.|.|+|+...     .++.+.|
T Consensus         2 ~i~~I~d~lsVsgQi~~~D~~~iaa~GFksiI~nRPDgEe~~QP~~~~i~~aa~~aGl~y~~iPV~~~-----~iT~~dV   76 (130)
T COG3453           2 DIRRINDRLSVSGQISPADIASIAALGFKSIICNRPDGEEPGQPGFAAIAAAAEAAGLTYTHIPVTGG-----GITEADV   76 (130)
T ss_pred             CceecccceeecCCCCHHHHHHHHHhccceecccCCCCCCCCCCChHHHHHHHHhcCCceEEeecCCC-----CCCHHHH
Confidence            4678899999999999999999999999999999997  11    12467788899999999999885     4568888


Q ss_pred             HHHHHHHHccCCCcEEEEcCCCCChHHHHHHHHHHHCCCCHHHHHH
Q 028983          130 REALKVLLDVRNHPVLIHCKRGKHRTGCLVGCLRKLQKWCLSSVFD  175 (201)
Q Consensus       130 ~~~l~~l~~~~~~pVLVHC~aG~~RTG~vva~~l~~~g~s~~~ai~  175 (201)
                      +.+.+.+ +..++|||.||++|. |+-.+.++-....|++.+++.+
T Consensus        77 ~~f~~Al-~eaegPVlayCrsGt-Rs~~ly~~~~~~~gm~~de~~a  120 (130)
T COG3453          77 EAFQRAL-DEAEGPVLAYCRSGT-RSLNLYGLGELDGGMSRDEIEA  120 (130)
T ss_pred             HHHHHHH-HHhCCCEEeeecCCc-hHHHHHHHHHHhcCCCHHHHHH
Confidence            8665555 458999999999996 9988888877677999999876

>COG2365 Protein tyrosine/serine phosphatase [Signal transduction mechanisms]

Probab=99.68  E-value=7.7e-17  Score=137.23  Aligned_cols=127  Identities=29%  Similarity=0.312  Sum_probs=92.0

Q ss_pred             CCccccccc-eEecCCCChhhHH--HHHhcCCcEEEEcCCC-CCC-----CchHHHHhhCCcEEEEeeeCCCCCCCCCCC
Q 028983           55 LNFSMVDNG-IFRSGFPDSANFS--FLQTLRLRSIIYLCPE-PYP-----EANTEFLKSNGIKLFQFAIEGHKEPFVNIP  125 (201)
Q Consensus        55 ~nf~~V~~~-Lyrsg~p~~~~l~--~L~~lGIktII~Lr~e-~~~-----~~~~~~~~~~gi~~~~ipi~d~~~p~~~i~  125 (201)
                      .++..|.+. +|||++|.+.+..  +...++++++|+|+.+ ...     +....+....++.....+...    .....
T Consensus        45 ~~~~~i~~~~~~Rs~~p~~~~~~~~~~~~~~l~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~  120 (249)
T COG2365          45 LNFLGIIPIIDYRSGQPVPVQPDPELLDALYLKTIINLRDESNTNVELYTDHLINWDKAAIIMFESYRSFP----TREDA  120 (249)
T ss_pred             cccccccceeEcCCCCcccccCCccccccccccccccccccchhhhhhhhhhhhhhccccchhhhhhccCc----cchhh
Confidence            445555555 9999999987665  8889999999999972 111     111111222233333323222    22334


Q ss_pred             HHHHHHHHHHHHccCCCcEEEEcCCCCChHHHHHHHHHHHCCCCHHHHHHHHHHHhcCCC
Q 028983          126 EDMIREALKVLLDVRNHPVLIHCKRGKHRTGCLVGCLRKLQKWCLSSVFDEYQRFAAAKA  185 (201)
Q Consensus       126 ~~~i~~~l~~l~~~~~~pVLVHC~aG~~RTG~vva~~l~~~g~s~~~ai~ey~~~~~~~~  185 (201)
                      .+.+.+++..+++..++|||+||++|++|||+++|||++..||+.+++++||+.+.++..
T Consensus       121 ~e~~~~~~~l~~~~e~~PvL~HC~~GkdRTGl~~al~r~~~~~~~~~v~~dyl~~~~~~~  180 (249)
T COG2365         121 AERLVELLQLLADAENGPVLIHCTAGKDRTGLVAALYRKLVGGSDETVAADYLLTNRYGE  180 (249)
T ss_pred             HHHHHHHHHHHhhcccCCEEEecCCCCcchHHHHHHHHHHhCCchhHHHHHHHHcCCccc
Confidence            688888999888766799999999999999999999999999999999999999977544

>PF05706 CDKN3: Cyclin-dependent kinase inhibitor 3 (CDKN3); InterPro: IPR022778 This entry represents a domain found in cyclin-dependent kinase inhibitor 3 or kinase associated phosphatase proteins from several mammalian species

Probab=99.67  E-value=4.5e-16  Score=124.34  Aligned_cols=99  Identities=20%  Similarity=0.282  Sum_probs=63.7

Q ss_pred             hhhHHHHHhcCCcEEEEcCCC-C---CC-CchHHHHhhCCcEEEEeeeCCCCCCCCCCCHHHHHHHHHHHHc--cCCCcE
Q 028983           72 SANFSFLQTLRLRSIIYLCPE-P---YP-EANTEFLKSNGIKLFQFAIEGHKEPFVNIPEDMIREALKVLLD--VRNHPV  144 (201)
Q Consensus        72 ~~~l~~L~~lGIktII~Lr~e-~---~~-~~~~~~~~~~gi~~~~ipi~d~~~p~~~i~~~~i~~~l~~l~~--~~~~pV  144 (201)
                      ..|++.|+++|++.||.|... +   +. ..+.+.+++.||.|+|+||.|...|.    .+.+.+++..|..  .++..|
T Consensus        61 ~~DL~~Lk~~G~~~Vvtl~~~~EL~~l~Vp~L~~~~~~~Gi~~~h~PI~D~~aPd----~~~~~~i~~eL~~~L~~g~~V  136 (168)
T PF05706_consen   61 QADLERLKDWGAQDVVTLLTDHELARLGVPDLGEAAQARGIAWHHLPIPDGSAPD----FAAAWQILEELAARLENGRKV  136 (168)
T ss_dssp             HHHHHHHHHTT--EEEE-S-HHHHHHTT-TTHHHHHHHTT-EEEE----TTS-------HHHHHHHHHHHHHHHHTT--E
T ss_pred             HHHHHHHHHCCCCEEEEeCcHHHHHHcCCccHHHHHHHcCCEEEecCccCCCCCC----HHHHHHHHHHHHHHHHcCCEE
Confidence            457899999999999999985 1   21 25667888999999999999999884    3334444444433  368999


Q ss_pred             EEEcCCCCChHHHHHHHHHHHC--CCCHHHHH
Q 028983          145 LIHCKRGKHRTGCLVGCLRKLQ--KWCLSSVF  174 (201)
Q Consensus       145 LVHC~aG~~RTG~vva~~l~~~--g~s~~~ai  174 (201)
                      +|||.+|.||||+++||+|...  +++.++||
T Consensus       137 ~vHC~GGlGRtGlvAAcLLl~L~~~~~p~~AI  168 (168)
T PF05706_consen  137 LVHCRGGLGRTGLVAACLLLELGDTMSPEQAI  168 (168)
T ss_dssp             EEE-SSSSSHHHHHHHHHHHHH-SSS-HHHHH
T ss_pred             EEECCCCCCHHHHHHHHHHHHHcCCCChhhcC
Confidence            9999999999999999999965  47777775

The cyclin-dependent kinase (Cdk)-associated protein phosphatase (KAP) is a human dual specificity protein phosphatase that dephosphorylates Cdk2 on threonine 160 in a cyclin-dependent manner [], []. This domain is also found in MAP kinase phosphatase and esterases. This entry contains both eukaryotic and bacterial proteins.; GO: 0004721 phosphoprotein phosphatase activity, 0004725 protein tyrosine phosphatase activity; PDB: 1FQ1_A 1FPZ_F.

>KOG1718 consensus Dual specificity phosphatase [Defense mechanisms]

Probab=99.66  E-value=1.1e-15  Score=121.73  Aligned_cols=132  Identities=15%  Similarity=0.178  Sum_probs=101.4

Q ss_pred             CCccccccceEecCCCChhhHHHHHhcCCcEEEEcCCCCCCCchHHHHhhCCcEEEEeeeCCCCCCCCCCCHHHHHHHHH
Q 028983           55 LNFSMVDNGIFRSGFPDSANFSFLQTLRLRSIIYLCPEPYPEANTEFLKSNGIKLFQFAIEGHKEPFVNIPEDMIREALK  134 (201)
Q Consensus        55 ~nf~~V~~~Lyrsg~p~~~~l~~L~~lGIktII~Lr~e~~~~~~~~~~~~~gi~~~~ipi~d~~~p~~~i~~~~i~~~l~  134 (201)
                      ..++.|+++||.|..-.+.+-.+|++.||+.|||...|.+....      .+++|.++|+.|.....+....+.+.+.++
T Consensus        15 ~~~SqIt~sLfl~~GvaA~~k~~l~~~~It~IiNat~E~pn~~l------~~~qy~kv~~~D~p~~~l~~hfD~vAD~I~   88 (198)
T KOG1718|consen   15 GGMSQITPSLFLSNGVAANDKLLLKKRKITCIINATTEVPNTSL------PDIQYMKVPLEDTPQARLYDHFDPVADKIH   88 (198)
T ss_pred             cchhhcCcceeEeccccccCHHHHHhcCceEEEEcccCCCCccC------CCceeEEEEcccCCcchhhhhhhHHHHHHH
Confidence            46889999999996667778888999999999999998443222      489999999999754322222344555555


Q ss_pred             HHHccCCCcEEEEcCCCCChHHHHHHHHHH-HCCCCHHHHHHHHHHHhcCCCCchhhhhHhh
Q 028983          135 VLLDVRNHPVLIHCKRGKHRTGCLVGCLRK-LQKWCLSSVFDEYQRFAAAKARVSDQRGTRI  195 (201)
Q Consensus       135 ~l~~~~~~pVLVHC~aG~~RTG~vva~~l~-~~g~s~~~ai~ey~~~~~~~~~~~~~~Fie~  195 (201)
                      .+. .++|.+||||.+|.+||..++.+||+ ++++++-+|.. +.+..+|..|+ |.+|-++
T Consensus        89 ~v~-~~gG~TLvHC~AGVSRSAsLClAYLmK~~~msLreAy~-~vKa~RpiIRP-N~GFw~Q  147 (198)
T KOG1718|consen   89 SVI-MRGGKTLVHCVAGVSRSASLCLAYLMKYHCMSLREAYH-WVKARRPIIRP-NVGFWRQ  147 (198)
T ss_pred             HHH-hcCCcEEEEEccccchhHHHHHHHHHHHccchHHHHHH-HHHhhCceeCC-CccHHHH
Confidence            543 47999999999999999998888887 67999999987 56566776664 7777654

>KOG1716 consensus Dual specificity phosphatase [Defense mechanisms]

Probab=99.62  E-value=4.5e-15  Score=128.59  Aligned_cols=135  Identities=17%  Similarity=0.240  Sum_probs=105.5

Q ss_pred             CCCccccccceEecCCCChhhHHHHHhcCCcEEEEcCCCCCCCchHHHHhhCCcEEEEeeeCCCCCCCCCCCHHHHHHHH
Q 028983           54 PLNFSMVDNGIFRSGFPDSANFSFLQTLRLRSIIYLCPEPYPEANTEFLKSNGIKLFQFAIEGHKEPFVNIPEDMIREAL  133 (201)
Q Consensus        54 p~nf~~V~~~Lyrsg~p~~~~l~~L~~lGIktII~Lr~e~~~~~~~~~~~~~gi~~~~ipi~d~~~p~~~i~~~~i~~~l  133 (201)
                      ..+...|.++||.|+...+.+.+.|+++||++|+|+........   +....+++|.++|+.|....  ++ ...+.+++
T Consensus        72 ~~~~~~i~p~l~lg~~~~~~~~~~l~~~~it~vln~~~~~~~~~---~~~~~~~~y~~i~~~D~~~~--~i-~~~~~~~~  145 (285)
T KOG1716|consen   72 GNPIVEILPNLYLGSQGVASDPDLLKKLGITHVLNVSSSCPNPR---FLKEQGIKYLRIPVEDNPST--DI-LQHFPEAI  145 (285)
T ss_pred             cCCceeecCCceecCcccccchhhHHHcCCCEEEEecccCCccc---cccccCceEEeccccCCccc--cH-HHHHHHHH
Confidence            36788899999999999999999999999999999998732211   22334899999999996544  33 23455555


Q ss_pred             HHHHc--cCCCcEEEEcCCCCChHHHHHHHHHH-HCCCCHHHHHHHHHHHhcCCCCchhhhhHhhh
Q 028983          134 KVLLD--VRNHPVLIHCKRGKHRTGCLVGCLRK-LQKWCLSSVFDEYQRFAAAKARVSDQRGTRIL  196 (201)
Q Consensus       134 ~~l~~--~~~~pVLVHC~aG~~RTG~vva~~l~-~~g~s~~~ai~ey~~~~~~~~~~~~~~Fie~f  196 (201)
                      ++|..  ..++.|||||.+|.+||.+++.+|+| ..||++++|++-++.. |+.+.+ |.+|+.+.
T Consensus       146 ~fI~~a~~~~~~vlVHC~~GvSRSat~viAYlM~~~~~~l~~A~~~vk~~-R~~i~P-N~gf~~QL  209 (285)
T KOG1716|consen  146 SFIEKAREKGGKVLVHCQAGVSRSATLVIAYLMKYEGLSLEDAYELVKSR-RPIISP-NFGFLRQL  209 (285)
T ss_pred             HHHHHHHhCCCeEEEEcCCccchhHHHHHHHHHHHcCCCHHHHHHHHHHh-CCccCC-CHHHHHHH
Confidence            55543  46899999999999999998888888 5799999999977755 665644 88887654

>KOG1719 consensus Dual specificity phosphatase [Defense mechanisms]

Probab=99.57  E-value=2.5e-14  Score=112.66  Aligned_cols=116  Identities=16%  Similarity=0.381  Sum_probs=89.7

Q ss_pred             eEecCCCC-hhhHHHHHhcCCcEEEEcCCC-CCCCchHHHHhhCCcEEEEeeeCCC-CCCCCCCCHHHHHHHHHHHHc--
Q 028983           64 IFRSGFPD-SANFSFLQTLRLRSIIYLCPE-PYPEANTEFLKSNGIKLFQFAIEGH-KEPFVNIPEDMIREALKVLLD--  138 (201)
Q Consensus        64 Lyrsg~p~-~~~l~~L~~lGIktII~Lr~e-~~~~~~~~~~~~~gi~~~~ipi~d~-~~p~~~i~~~~i~~~l~~l~~--  138 (201)
                      +..|..|- ..+.+.++++|+..||.+..+ ++. .....-++.||+++.+|..|. ..|.    .+.|.+++++|..  
T Consensus        32 v~~~~~~FrS~~~~~i~ke~v~gvv~~ne~yE~~-a~s~~wk~~giE~L~i~T~D~~~~Ps----~~~i~~aVeFi~k~a  106 (183)
T KOG1719|consen   32 VILGAMPFRSMDVPLIKKENVGGVVTLNEPYELL-APSNLWKNYGIEFLVIPTRDYTGAPS----LENIQKAVEFIHKNA  106 (183)
T ss_pred             EEEeecccccccchHHHhcCCCeEEEeCCchhhh-hhhHHHHhccceeEEeccccccCCCC----HHHHHHHHHHHHhcc
Confidence            33344443 247789999999999999987 322 222345678999999999885 4553    7889999999875  


Q ss_pred             cCCCcEEEEcCCCCChHHHHHHHHHHH-CCCCHHHHHHHHHHHhcCCC
Q 028983          139 VRNHPVLIHCKRGKHRTGCLVGCLRKL-QKWCLSSVFDEYQRFAAAKA  185 (201)
Q Consensus       139 ~~~~pVLVHC~aG~~RTG~vva~~l~~-~g~s~~~ai~ey~~~~~~~~  185 (201)
                      ..++.|||||++|.+||.++++|||+. .+|+.++|++-.+.. |+..
T Consensus       107 sLGktvYVHCKAGRtRSaTvV~cYLmq~~~wtpe~A~~~vr~i-Rp~V  153 (183)
T KOG1719|consen  107 SLGKTVYVHCKAGRTRSATVVACYLMQHKNWTPEAAVEHVRKI-RPRV  153 (183)
T ss_pred             ccCCeEEEEecCCCccchhhhhhhhhhhcCCCHHHHHHHHHhc-Ccce
Confidence            357889999999999999999999996 599999999855544 6644

>KOG1717 consensus Dual specificity phosphatase [Defense mechanisms]

Probab=99.55  E-value=2.4e-14  Score=121.48  Aligned_cols=127  Identities=17%  Similarity=0.234  Sum_probs=98.1

Q ss_pred             ccccceEecCCCChhhHHHHHhcCCcEEEEcCCCCCCCchHHHHhh-CCcEEEEeeeCCCCCCCCCCCHHHHHHHHHHHH
Q 028983           59 MVDNGIFRSGFPDSANFSFLQTLRLRSIIYLCPEPYPEANTEFLKS-NGIKLFQFAIEGHKEPFVNIPEDMIREALKVLL  137 (201)
Q Consensus        59 ~V~~~Lyrsg~p~~~~l~~L~~lGIktII~Lr~e~~~~~~~~~~~~-~gi~~~~ipi~d~~~p~~~i~~~~i~~~l~~l~  137 (201)
                      .|.|.||.|+.-+..+++.|+++||++|||+++..+     ..++. ..+.|..||+.|+-..  .+ ...+-+++.+|.
T Consensus       174 ~ilp~LYLg~a~ds~NldvLkk~gI~yviNVTpnlp-----n~fe~~g~f~YkqipisDh~Sq--nl-s~ffpEAIsfId  245 (343)
T KOG1717|consen  174 EILPNLYLGCAKDSTNLDVLKKYGIKYVINVTPNLP-----NNFENNGEFIYKQIPISDHASQ--NL-SQFFPEAISFID  245 (343)
T ss_pred             hhccchhcccccccccHHHHHhcCceEEEecCCCCc-----chhhcCCceeEEeeeccchhhh--hh-hhhhHHHHHHHH
Confidence            578999999999999999999999999999998632     23333 4589999999997432  12 245667777776


Q ss_pred             c--cCCCcEEEEcCCCCChHHHHHHHHHH-HCCCCHHHHHHHHHHHhcCCCCchhhhhHhh
Q 028983          138 D--VRNHPVLIHCKRGKHRTGCLVGCLRK-LQKWCLSSVFDEYQRFAAAKARVSDQRGTRI  195 (201)
Q Consensus       138 ~--~~~~pVLVHC~aG~~RTG~vva~~l~-~~g~s~~~ai~ey~~~~~~~~~~~~~~Fie~  195 (201)
                      +  .++-.|||||-+|.+|+.+++.+||| ....+..+|++=+++... ++. .|=.|+-+
T Consensus       246 eArsk~cgvLVHClaGISRSvTvtvaYLMqkl~lslndAyd~Vk~kks-nis-PNFnFMgQ  304 (343)
T KOG1717|consen  246 EARSKNCGVLVHCLAGISRSVTVTVAYLMQKLNLSLNDAYDFVKHKKS-NIS-PNFNFMGQ  304 (343)
T ss_pred             HhhccCCcEEEeeeccccchhHHHHHHHHHHhccchhhHHHHHHHhcc-CCC-CCcchhHH
Confidence            5  35788999999999999999999999 569999999987766533 332 45566543

>COG2453 CDC14 Predicted protein-tyrosine phosphatase [Signal transduction mechanisms]

Probab=99.36  E-value=4.3e-12  Score=103.07  Aligned_cols=75  Identities=16%  Similarity=0.306  Sum_probs=60.4

Q ss_pred             HhhCCcEEEEeeeCCCCCCCCCCCHHHHHHHHHHHHc--cCCCcEEEEcCCCCChHHHHHHHHHHH--CCCCHHHHHHHH
Q 028983          102 LKSNGIKLFQFAIEGHKEPFVNIPEDMIREALKVLLD--VRNHPVLIHCKRGKHRTGCLVGCLRKL--QKWCLSSVFDEY  177 (201)
Q Consensus       102 ~~~~gi~~~~ipi~d~~~p~~~i~~~~i~~~l~~l~~--~~~~pVLVHC~aG~~RTG~vva~~l~~--~g~s~~~ai~ey  177 (201)
                      .+..|+.++++|+.|...|.    ...+.+++.+|.+  ..++.|+|||.+|.||||+++|+|+++  .++..+++++.+
T Consensus        68 ~~~~~~~~~~~~~~D~~~p~----~~~l~~~v~~i~~~~~~g~kVvVHC~~GigRSgtviaA~lm~~~~~~~~~~~i~~~  143 (180)
T COG2453          68 EENDGIQVLHLPILDGTVPD----LEDLDKIVDFIEEALSKGKKVVVHCQGGIGRSGTVIAAYLMLYGGLSLADEAIAVK  143 (180)
T ss_pred             eccCCceeeeeeecCCCCCc----HHHHHHHHHHHHHHHhcCCeEEEEcCCCCchHHHHHHHHHHHHcCCCCHHHHHHHH
Confidence            44579999999999998885    3666777777654  356799999999999999999988884  478888888866


Q ss_pred             HHH
Q 028983          178 QRF  180 (201)
Q Consensus       178 ~~~  180 (201)
                      ++.
T Consensus       144 ~~~  146 (180)
T COG2453         144 RRR  146 (180)
T ss_pred             Hhc
Confidence            655

>KOG2836 consensus Protein tyrosine phosphatase IVA1 [Signal transduction mechanisms]

Probab=99.27  E-value=1e-10  Score=90.46  Aligned_cols=127  Identities=14%  Similarity=0.212  Sum_probs=98.8

Q ss_pred             EecCCCChh----hHHHHHhcCCcEEEEcCCCCCCCchHHHHhhCCcEEEEeeeCCCCCCCCCCCHHHHHHHHHHHHc--
Q 028983           65 FRSGFPDSA----NFSFLQTLRLRSIIYLCPEPYPEANTEFLKSNGIKLFQFAIEGHKEPFVNIPEDMIREALKVLLD--  138 (201)
Q Consensus        65 yrsg~p~~~----~l~~L~~lGIktII~Lr~e~~~~~~~~~~~~~gi~~~~ipi~d~~~p~~~i~~~~i~~~l~~l~~--  138 (201)
                      .....|+.+    -++.|+++|++|||-++...|+.   ..+++.||.....|++|...|.    ...+...++.+..  
T Consensus        20 LIThnPtnaTln~fieELkKygvttvVRVCe~TYdt---~~lek~GI~Vldw~f~dg~ppp----~qvv~~w~~l~~~~f   92 (173)
T KOG2836|consen   20 LITHNPTNATLNKFIEELKKYGVTTVVRVCEPTYDT---TPLEKEGITVLDWPFDDGAPPP----NQVVDDWLSLVKTKF   92 (173)
T ss_pred             EEecCCCchhHHHHHHHHHhcCCeEEEEecccccCC---chhhhcCceEeecccccCCCCc----hHHHHHHHHHHHHHH
Confidence            344556544    35889999999999999887753   3456789999999999976553    4556666665543  


Q ss_pred             --cCCCcEEEEcCCCCChHHHHHHHHHHHCCCCHHHHHHHHHHHhcCCCCchhhhhHhhhcc
Q 028983          139 --VRNHPVLIHCKRGKHRTGCLVGCLRKLQKWCLSSVFDEYQRFAAAKARVSDQRGTRILSP  198 (201)
Q Consensus       139 --~~~~pVLVHC~aG~~RTG~vva~~l~~~g~s~~~ai~ey~~~~~~~~~~~~~~Fie~f~~  198 (201)
                        ..+..|.|||-+|.||..+++|+-|...|+..++|++-++...++....-|-.|+|.+..
T Consensus        93 ~e~p~~cvavhcvaglgrapvlvalalie~gmkyedave~ir~krrga~n~kql~~lekyrp  154 (173)
T KOG2836|consen   93 REEPGCCVAVHCVAGLGRAPVLVALALIEAGMKYEDAVEMIRQKRRGAINSKQLLYLEKYRP  154 (173)
T ss_pred             hhCCCCeEEEEeecccCcchHHHHHHHHHccccHHHHHHHHHHHhhccccHHHHHHHHHhCc
Confidence              245669999999999999999999999999999999988877665445577888887764

>smart00012 PTPc_DSPc Protein tyrosine phosphatase, catalytic domain, undefined specificity

Probab=99.01  E-value=8.9e-10  Score=79.62  Aligned_cols=82  Identities=22%  Similarity=0.227  Sum_probs=55.2

Q ss_pred             EEEEeeeCCCCCCCCCCCHHHHHHHHHHHHcc-----CCCcEEEEcCCCCChHHHHHHHHHHHCC-------CCHHHHHH
Q 028983          108 KLFQFAIEGHKEPFVNIPEDMIREALKVLLDV-----RNHPVLIHCKRGKHRTGCLVGCLRKLQK-------WCLSSVFD  175 (201)
Q Consensus       108 ~~~~ipi~d~~~p~~~i~~~~i~~~l~~l~~~-----~~~pVLVHC~aG~~RTG~vva~~l~~~g-------~s~~~ai~  175 (201)
                      .|.+.++.+...|.   ..+.+.++++.+...     .++||+|||.+|.||||++++++++..+       .+..+++.
T Consensus         4 ~~~~~~Wpd~~~P~---~~~~~~~~~~~v~~~~~~~~~~~pvlVHC~~G~gRtg~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (105)
T smart00012        4 HYHYTGWPDHGVPE---SPDSILEFLRAVKKNLNQSSSSGPVVVHCSAGVGRTGTFVALDILLQQLESETGEVDIFQTVK   80 (105)
T ss_pred             EEeeCCCCCCCCCC---CHHHHHHHHHHHHHHHHhcCCCCCEEEEeCCCCChhhHHHHHHHHHHHHHhcCCCCCHHHHHH
Confidence            35556666666663   135666677766542     2689999999999999999999887432       56778888


Q ss_pred             HHHHHhcCCCCchhhhhH
Q 028983          176 EYQRFAAAKARVSDQRGT  193 (201)
Q Consensus       176 ey~~~~~~~~~~~~~~Fi  193 (201)
                      .++.. ++.......+|.
T Consensus        81 ~ir~~-r~~~~~~~~q~~   97 (105)
T smart00012       81 ELRKQ-RPGMVQTFEQYL   97 (105)
T ss_pred             HHHhh-hhhhCCcHHHHH
Confidence            77766 433433444443

Protein tyrosine phosphatases. Homologues detected by this profile and not by those of "PTPc" or "DSPc" are predicted to be protein phosphatases with a similar fold to DSPs and PTPs, yet with unpredicted specificities.

>smart00404 PTPc_motif Protein tyrosine phosphatase, catalytic domain motif

Probab=99.01  E-value=8.9e-10  Score=79.62  Aligned_cols=82  Identities=22%  Similarity=0.227  Sum_probs=55.2

Q ss_pred             EEEEeeeCCCCCCCCCCCHHHHHHHHHHHHcc-----CCCcEEEEcCCCCChHHHHHHHHHHHCC-------CCHHHHHH
Q 028983          108 KLFQFAIEGHKEPFVNIPEDMIREALKVLLDV-----RNHPVLIHCKRGKHRTGCLVGCLRKLQK-------WCLSSVFD  175 (201)
Q Consensus       108 ~~~~ipi~d~~~p~~~i~~~~i~~~l~~l~~~-----~~~pVLVHC~aG~~RTG~vva~~l~~~g-------~s~~~ai~  175 (201)
                      .|.+.++.+...|.   ..+.+.++++.+...     .++||+|||.+|.||||++++++++..+       .+..+++.
T Consensus         4 ~~~~~~Wpd~~~P~---~~~~~~~~~~~v~~~~~~~~~~~pvlVHC~~G~gRtg~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (105)
T smart00404        4 HYHYTGWPDHGVPE---SPDSILEFLRAVKKNLNQSSSSGPVVVHCSAGVGRTGTFVALDILLQQLESETGEVDIFQTVK   80 (105)
T ss_pred             EEeeCCCCCCCCCC---CHHHHHHHHHHHHHHHHhcCCCCCEEEEeCCCCChhhHHHHHHHHHHHHHhcCCCCCHHHHHH
Confidence            35556666666663   135666677766542     2689999999999999999999887432       56778888


Q ss_pred             HHHHHhcCCCCchhhhhH
Q 028983          176 EYQRFAAAKARVSDQRGT  193 (201)
Q Consensus       176 ey~~~~~~~~~~~~~~Fi  193 (201)
                      .++.. ++.......+|.
T Consensus        81 ~ir~~-r~~~~~~~~q~~   97 (105)
T smart00404       81 ELRKQ-RPGMVQTFEQYL   97 (105)
T ss_pred             HHHhh-hhhhCCcHHHHH
Confidence            77766 433433444443

>KOG2283 consensus Clathrin coat dissociation kinase GAK/PTEN/Auxilin and related tyrosine phosphatases [Signal transduction mechanisms; General function prediction only]

Probab=98.94  E-value=2.3e-09  Score=97.75  Aligned_cols=139  Identities=19%  Similarity=0.288  Sum_probs=95.2

Q ss_pred             CCccccccceEecCCCChh-------h----HHHHHhc--CCcEEEEcCCCCCCCchHHHHhhCCcEEEEeeeCCCCCCC
Q 028983           55 LNFSMVDNGIFRSGFPDSA-------N----FSFLQTL--RLRSIIYLCPEPYPEANTEFLKSNGIKLFQFAIEGHKEPF  121 (201)
Q Consensus        55 ~nf~~V~~~Lyrsg~p~~~-------~----l~~L~~l--GIktII~Lr~e~~~~~~~~~~~~~gi~~~~ipi~d~~~p~  121 (201)
                      +.+..|+++|..++.|...       +    ..+|...  |=-.|.||+.+...+. ..    -.=+...+|+.|+..|.
T Consensus        13 LDltYIT~rIIamsfPa~~~es~yRN~l~dV~~fL~s~H~~~y~vyNL~~er~yd~-~~----f~g~V~~~~~~Dh~~P~   87 (434)
T KOG2283|consen   13 LDLTYITSRIIAMSFPAEGIESLYRNNLEDVVLFLDSKHKDHYKVYNLSSERLYDP-SR----FHGRVARFGFDDHNPPP   87 (434)
T ss_pred             ccceeeeeeEEEEeCCCCcchhhhcCCHHHHHHHHhhccCCceEEEecCccccCCc-cc----cccceeecCCCCCCCCc
Confidence            3456678888888888742       1    2556533  4445999997633221 11    12355669999999996


Q ss_pred             CCCCHHHHHHHHHHHHccCCCcEEEEcCCCCChHHHHHHHHHHHCCC--CHHHHHHHHHHHh---c---CCCCchhhhhH
Q 028983          122 VNIPEDMIREALKVLLDVRNHPVLIHCKRGKHRTGCLVGCLRKLQKW--CLSSVFDEYQRFA---A---AKARVSDQRGT  193 (201)
Q Consensus       122 ~~i~~~~i~~~l~~l~~~~~~pVLVHC~aG~~RTG~vva~~l~~~g~--s~~~ai~ey~~~~---~---~~~~~~~~~Fi  193 (201)
                      +..-...++.+=.++.......+.|||++|++|||+++++||++.|.  +.++|++-|....   +   +...+++.+|+
T Consensus        88 L~~l~~~c~~~~~WL~~d~~nVvvvHCk~Gkgrtg~~icA~L~~~~~~~ta~eald~~~~kR~~~~~~~~~~~PSq~RYv  167 (434)
T KOG2283|consen   88 LELLCPFCKSMDNWLSEDPKNVVVVHCKAGKGRTGVMICAYLIYSGISATAEEALDYFNEKRFDEGKSKGVTIPSQRRYV  167 (434)
T ss_pred             HHHHHHHHHCHHHHHhcCccceEEEEccCCCcceEEEEeHHHHhhhhcCCHHHHHHHHhhhhccccccCCccCchhhHHH
Confidence            44333444444555555457889999999999999999999998654  3789998887664   2   12257999999


Q ss_pred             hhhcc
Q 028983          194 RILSP  198 (201)
Q Consensus       194 e~f~~  198 (201)
                      .+|..
T Consensus       168 ~Y~~~  172 (434)
T KOG2283|consen  168 GYFSR  172 (434)
T ss_pred             HHHHH
Confidence            99864

>PF14566 PTPlike_phytase: Inositol hexakisphosphate; PDB: 1U24_A 2PSZ_B 3MOZ_A 3D1H_B 2B4P_B 3D1Q_A 2B4O_A 3MMJ_B 1U25_A 1U26_B

Probab=98.91  E-value=4.8e-09  Score=82.82  Aligned_cols=63  Identities=19%  Similarity=0.426  Sum_probs=47.2

Q ss_pred             hHHHHhhCCcEEEEeeeCCCCCCCCCCCHHHHHHHHHHHHc-cCCCcEEEEcCCCCChHHHHHHHHHH
Q 028983           98 NTEFLKSNGIKLFQFAIEGHKEPFVNIPEDMIREALKVLLD-VRNHPVLIHCKRGKHRTGCLVGCLRK  164 (201)
Q Consensus        98 ~~~~~~~~gi~~~~ipi~d~~~p~~~i~~~~i~~~l~~l~~-~~~~pVLVHC~aG~~RTG~vva~~l~  164 (201)
                      +...++..|+.|+.+|+.|+..|.    .+.|.++++++.+ +.+..+.|||.+|+|||.+..++|.+
T Consensus        84 e~~~~~~~g~~Y~Ripitd~~~P~----~~~iD~fi~~v~~~p~~~~l~fhC~~G~GRTTt~Mv~~~l  147 (149)
T PF14566_consen   84 EEELVEGNGLRYYRIPITDHQAPD----PEDIDAFINFVKSLPKDTWLHFHCQAGRGRTTTFMVMYDL  147 (149)
T ss_dssp             HHHHHHHTT-EEEEEEE-TTS-------HHHHHHHHHHHHTS-TT-EEEEE-SSSSHHHHHHHHHHHH
T ss_pred             HHHHHhcCCceEEEEeCCCcCCCC----HHHHHHHHHHHHhCCCCCeEEEECCCCCCHHHHHHHHHHH
Confidence            456778899999999999998885    7889999999877 35677999999999999977777655

...

>cd00047 PTPc Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways

Probab=98.64  E-value=1.5e-07  Score=78.37  Aligned_cols=68  Identities=16%  Similarity=0.241  Sum_probs=49.9

Q ss_pred             HHHHHHHHHHHcc----CCCcEEEEcCCCCChHHHHHHHHHHH------CCCCHHHHHHHHHHHhcCCCCchhhhhHhh
Q 028983          127 DMIREALKVLLDV----RNHPVLIHCKRGKHRTGCLVGCLRKL------QKWCLSSVFDEYQRFAAAKARVSDQRGTRI  195 (201)
Q Consensus       127 ~~i~~~l~~l~~~----~~~pVLVHC~aG~~RTG~vva~~l~~------~g~s~~~ai~ey~~~~~~~~~~~~~~Fie~  195 (201)
                      +.+.++++.+...    ..+||+|||.+|.||||+++|+++.+      ..++..+++..++.. ++.+.....+|.-.
T Consensus       148 ~~~~~~~~~v~~~~~~~~~~pivVHC~~G~gRsg~~~a~~~~~~~~~~~~~~~~~~~v~~iR~~-R~~~v~~~~Qy~f~  225 (231)
T cd00047         148 DSLLDLLRKVRKSQQQPGSGPIVVHCSAGVGRTGTFIAIDILLQRLEAEGVVDIFQTVKELRSQ-RPGMVQTEEQYIFL  225 (231)
T ss_pred             HHHHHHHHHHHHHhccCCCCCeEEECCCCCCccchHHHHHHHHHHHHhcCCCCHHHHHHHHHhc-cccccCCHHHHHHH
Confidence            5566677776543    37899999999999999999988653      258999999988876 44454444455433

The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr (pTyr) residues, instead of pSer or pThr. This family has a distinctive active site signature motif, HCSAGxGRxG. Characterized as either transmembrane, receptor-like or non-transmembrane (soluble) PTPs. Receptor-like PTP domains tend to occur in two copies in the cytoplasmic region of the transmembrane proteins, only one copy may be active.

>smart00194 PTPc Protein tyrosine phosphatase, catalytic domain

Probab=98.59  E-value=3e-07  Score=77.98  Aligned_cols=69  Identities=14%  Similarity=0.262  Sum_probs=49.5

Q ss_pred             HHHHHHHHHHHHcc---CCCcEEEEcCCCCChHHHHHHHHHHH------CCCCHHHHHHHHHHHhcCCCCchhhhhHhh
Q 028983          126 EDMIREALKVLLDV---RNHPVLIHCKRGKHRTGCLVGCLRKL------QKWCLSSVFDEYQRFAAAKARVSDQRGTRI  195 (201)
Q Consensus       126 ~~~i~~~l~~l~~~---~~~pVLVHC~aG~~RTG~vva~~l~~------~g~s~~~ai~ey~~~~~~~~~~~~~~Fie~  195 (201)
                      ...+.++++.+...   .++||+|||.+|.||||+++|++..+      ..++..+++..++.. |+.+...-.+|.-.
T Consensus       175 ~~~~~~~i~~v~~~~~~~~~pivVHC~~G~gRsg~f~a~~~~~~~l~~~~~v~v~~~v~~lR~~-R~~~v~~~~Qy~f~  252 (258)
T smart00194      175 PKSILDLVRAVRKSQSTSTGPIVVHCSAGVGRTGTFIAIDILLQQLEAGKEVDIFEIVKELRSQ-RPGMVQTEEQYIFL  252 (258)
T ss_pred             HHHHHHHHHHHHHhhccCCCCEEEEeCCCCCccchhhHHHHHHHHHHHcCCCCHHHHHHHHHhc-cccccCCHHHHHHH
Confidence            35566677766542   27899999999999999999987653      368899999988876 55454444444433

>PRK15375 pathogenicity island 1 effector protein StpP; Provisional

Probab=98.40  E-value=1.8e-06  Score=79.84  Aligned_cols=54  Identities=19%  Similarity=0.237  Sum_probs=42.1

Q ss_pred             EEEEcCCCCChHHHHHHHHHHHC--CCCHHHHHHHHHHHhcCC-CCchhhhhHhhhcc
Q 028983          144 VLIHCKRGKHRTGCLVGCLRKLQ--KWCLSSVFDEYQRFAAAK-ARVSDQRGTRILSP  198 (201)
Q Consensus       144 VLVHC~aG~~RTG~vva~~l~~~--g~s~~~ai~ey~~~~~~~-~~~~~~~Fie~f~~  198 (201)
                      .+|||++|.||||+++|++++..  ..+.++++.++|.. |++ -....++|.-+.++
T Consensus       469 PVVHCSAGVGRTGTFIAi~llk~~~~~sle~IV~dlR~q-Rng~MVQt~eQy~~l~~~  525 (535)
T PRK15375        469 PMIHCLGGVGRTGTMAAALVLKDNPHSNLEQVRADFRNS-RNNRMLEDASQFVQLKAM  525 (535)
T ss_pred             ceEEcCCCCchHHHHHHHHHHhccccCCHHHHHHHHHhc-CCccccccHHHHHHHHHH
Confidence            37999999999999999998752  57899999999977 544 44466777665543

>KOG2386 consensus mRNA capping enzyme, guanylyltransferase (alpha) subunit [RNA processing and modification]

Probab=98.35  E-value=1.1e-06  Score=78.99  Aligned_cols=108  Identities=19%  Similarity=0.336  Sum_probs=74.8

Q ss_pred             hhHHHHHhcCCcE--EEEcCCC-CCCCchHHHHhhCCcEEEEeeeCCCC-CCCCCCCHHHHHHHHHHHHc---cCCCcEE
Q 028983           73 ANFSFLQTLRLRS--IIYLCPE-PYPEANTEFLKSNGIKLFQFAIEGHK-EPFVNIPEDMIREALKVLLD---VRNHPVL  145 (201)
Q Consensus        73 ~~l~~L~~lGIkt--II~Lr~e-~~~~~~~~~~~~~gi~~~~ipi~d~~-~p~~~i~~~~i~~~l~~l~~---~~~~pVL  145 (201)
                      ..+..|+.+|.+.  +|||... -|.  .....+..|+.|+.+...++. .|........+. +++...+   ..+.-|+
T Consensus        52 dl~~~l~~~~~~vgl~iDltnt~ryy--~~~~~~~~g~~Y~K~~c~g~~~vp~~~~v~~fv~-~v~~f~~~~~~~~~LI~  128 (393)
T KOG2386|consen   52 DLFELLKEHNYKVGLKIDLTNTLRYY--DKPELEERGVKYLKRNCPGRGVVPRTELVDKFVK-LVKGFVDDTKLDDELIG  128 (393)
T ss_pred             HHHHHHHhcCceEEEEEeccceeeee--ccccccccceeEEEeccCCcccCCCccchHHHHH-HHHHHHhcccCCCCEEE
Confidence            3567788777655  9999976 222  123345679999999888875 343222222233 3333222   1356699


Q ss_pred             EEcCCCCChHHHHHHHHHHH-CCCCHHHHHHHHHHHhcC
Q 028983          146 IHCKRGKHRTGCLVGCLRKL-QKWCLSSVFDEYQRFAAA  183 (201)
Q Consensus       146 VHC~aG~~RTG~vva~~l~~-~g~s~~~ai~ey~~~~~~  183 (201)
                      |||++|++|||.++++||+. .+|+..+|++.+...+.+
T Consensus       129 vhcthG~NrtgyLI~~yL~~~~~~s~~~aik~f~~~r~~  167 (393)
T KOG2386|consen  129 VHCTHGLNRTGYLICAYLADVGGYSSSEAIKRFADARPP  167 (393)
T ss_pred             EeCCCcccccceeeeeeeeeccCccHHHHHHHHHHhCCC
Confidence            99999999999999999984 589999999999988554

>PHA02740 protein tyrosine phosphatase; Provisional

Probab=98.34  E-value=5.5e-06  Score=72.47  Aligned_cols=53  Identities=8%  Similarity=0.062  Sum_probs=37.9

Q ss_pred             CCCcEEEEcCCCCChHHHHHHHHHHH------CCCCHHHHHHHHHHHhcCCCCchhhhhH
Q 028983          140 RNHPVLIHCKRGKHRTGCLVGCLRKL------QKWCLSSVFDEYQRFAAAKARVSDQRGT  193 (201)
Q Consensus       140 ~~~pVLVHC~aG~~RTG~vva~~l~~------~g~s~~~ai~ey~~~~~~~~~~~~~~Fi  193 (201)
                      ..+||+|||++|.||||+++|+-..+      ..++.-+++...++- |+.....-++|+
T Consensus       220 ~~~PIVVHCSaGvGRTGtFcaiDi~l~~~~~~~~vdi~~~V~~lR~q-R~~~Vqt~~QY~  278 (298)
T PHA02740        220 KIAPIIIDCIDGISSSAVFCVFDICATEFDKTGMLSIANALKKVRQK-KYGCMNCLDDYV  278 (298)
T ss_pred             CCCCEEEECCCCCchhHHHHHHHHHHHHHHhcCcccHHHHHHHHHhh-CccccCCHHHHH
Confidence            35899999999999999999865442      357788888888866 443433344443

>PHA02742 protein tyrosine phosphatase; Provisional

Probab=98.32  E-value=3.5e-06  Score=73.78  Aligned_cols=52  Identities=19%  Similarity=0.287  Sum_probs=37.7

Q ss_pred             CCcEEEEcCCCCChHHHHHHHHHHH------CCCCHHHHHHHHHHHhcCCCCchhhhhH
Q 028983          141 NHPVLIHCKRGKHRTGCLVGCLRKL------QKWCLSSVFDEYQRFAAAKARVSDQRGT  193 (201)
Q Consensus       141 ~~pVLVHC~aG~~RTG~vva~~l~~------~g~s~~~ai~ey~~~~~~~~~~~~~~Fi  193 (201)
                      .+||+|||.+|.||||+++|+...+      ..++.-+++..++.- |+.......+|+
T Consensus       229 ~~PIvVHCsaGvGRTGtF~aid~~i~~~~~~~~v~v~~~V~~lR~q-R~~~Vqt~~QY~  286 (303)
T PHA02742        229 EPPILVHCSAGLDRAGAFCAIDICISKYNERAIIPLLSIVRDLRKQ-RHNCLSLPQQYI  286 (303)
T ss_pred             CCCeEEECCCCCchhHHHHHHHHHHHHHHhcCCCCHHHHHHHHHhh-cccccCCHHHHH
Confidence            4799999999999999999876543      245677888878766 444433455554

>PHA02747 protein tyrosine phosphatase; Provisional

Probab=98.28  E-value=5.2e-06  Score=72.99  Aligned_cols=51  Identities=18%  Similarity=0.321  Sum_probs=36.9

Q ss_pred             CcEEEEcCCCCChHHHHHHHHHHH------CCCCHHHHHHHHHHHhcCCCCchhhhhH
Q 028983          142 HPVLIHCKRGKHRTGCLVGCLRKL------QKWCLSSVFDEYQRFAAAKARVSDQRGT  193 (201)
Q Consensus       142 ~pVLVHC~aG~~RTG~vva~~l~~------~g~s~~~ai~ey~~~~~~~~~~~~~~Fi  193 (201)
                      +||+|||.+|.||||+++|+-...      ...+..+++...++- |+.....-++|+
T Consensus       230 ~PIvVHCsaGvGRtGtfcaidi~i~~l~~~~~v~v~~~V~~lR~q-R~~~Vqt~~QY~  286 (312)
T PHA02747        230 CPIVVHCSDGVGKTGIFCAVDICLNQLVKRKAICLAKTAEKIREQ-RHAGIMNFDDYL  286 (312)
T ss_pred             CCEEEEecCCCcchhHHHHHHHHHHHHHhcCCCCHHHHHHHHHhc-cccccCCHHHHH
Confidence            799999999999999999876432      357778888877766 444433344443

>PHA02746 protein tyrosine phosphatase; Provisional

Probab=98.28  E-value=5.6e-06  Score=73.13  Aligned_cols=52  Identities=17%  Similarity=0.363  Sum_probs=37.8

Q ss_pred             CCcEEEEcCCCCChHHHHHHHHHHH------CCCCHHHHHHHHHHHhcCCCCchhhhhH
Q 028983          141 NHPVLIHCKRGKHRTGCLVGCLRKL------QKWCLSSVFDEYQRFAAAKARVSDQRGT  193 (201)
Q Consensus       141 ~~pVLVHC~aG~~RTG~vva~~l~~------~g~s~~~ai~ey~~~~~~~~~~~~~~Fi  193 (201)
                      .+||+|||.+|.||||+++|+-...      ..++.-+++..++.- |+.......+|.
T Consensus       247 ~~PIvVHCsaGvGRTGtfcaid~~l~~l~~~~~vdv~~~V~~lR~q-R~~~Vqt~~QY~  304 (323)
T PHA02746        247 LGPIVVHCSAGIGRAGTFCAIDNALEQLEKEKEVCLGEIVLKIRKQ-RHSSVFLPEQYA  304 (323)
T ss_pred             CCCEEEEcCCCCCcchhHHHHHHHHHHHHhcCCCCHHHHHHHHHhc-ccccCCCHHHHH
Confidence            3799999999999999999865432      357788888888866 444433444444

>COG5350 Predicted protein tyrosine phosphatase [General function prediction only]

Probab=98.16  E-value=2.6e-05  Score=61.82  Aligned_cols=120  Identities=16%  Similarity=0.183  Sum_probs=71.5

Q ss_pred             HHHHhcCCcEEEEcCCC-CCCCchHHHHhhCCcEEEEeeeCCCCC---CCCCCCHHHHHHHHHHHHc-cCCCcEEEEcCC
Q 028983           76 SFLQTLRLRSIIYLCPE-PYPEANTEFLKSNGIKLFQFAIEGHKE---PFVNIPEDMIREALKVLLD-VRNHPVLIHCKR  150 (201)
Q Consensus        76 ~~L~~lGIktII~Lr~e-~~~~~~~~~~~~~gi~~~~ipi~d~~~---p~~~i~~~~i~~~l~~l~~-~~~~pVLVHC~a  150 (201)
                      ++....|-+..|+|... .+.........+   +++++-+.|-..   +..--.++.++..++++.. .+..|+||||.+
T Consensus        26 e~~~rh~~t~mlsl~a~~t~~~~pa~~~~e---rhL~l~fnDI~~~~~g~~ap~e~Hv~~i~DF~~~wp~~apllIHC~a  102 (172)
T COG5350          26 ETAARHGPTHMLSLLAKGTYFHRPAVIAAE---RHLTLHFNDIAEPDDGWIAPGEAHVRAIIDFADEWPRFAPLLIHCYA  102 (172)
T ss_pred             HHHhhcCCceEEEeecccccccCccccchh---hceeEeeccccCCCccccCCCHHHHHHHHHHHhcCccccceeeeecc
Confidence            44557889999999985 221111111111   222333333211   1112237889988888765 578999999999


Q ss_pred             CCChHHHHHHH--HHHHCCCCHHHHHHHHHHHhcCCCCchhhhhHhhhcccC
Q 028983          151 GKHRTGCLVGC--LRKLQKWCLSSVFDEYQRFAAAKARVSDQRGTRILSPAL  200 (201)
Q Consensus       151 G~~RTG~vva~--~l~~~g~s~~~ai~ey~~~~~~~~~~~~~~Fie~f~~~~  200 (201)
                      |.+||..++..  +-..-.....+..+..+.+ ++.+. .|.+.|..+|..|
T Consensus       103 GISRStA~A~i~a~ala~~~de~ela~~Lra~-sp~at-PN~RliaI~d~~l  152 (172)
T COG5350         103 GISRSTAAALIAALALAPDMDETELAERLRAL-SPYAT-PNPRLIAIADAAL  152 (172)
T ss_pred             ccccchHHHHHHHHhhccccChHHHHHHHHhc-CcccC-CChhHHHHHHHHH
Confidence            99999754433  3333466666666666655 44453 5888888877543

>PF00102 Y_phosphatase: Protein-tyrosine phosphatase; InterPro: IPR000242 Protein tyrosine (pTyr) phosphorylation is a common post-translational modification which can create novel recognition motifs for protein interactions and cellular localisation, affect protein stability, and regulate enzyme activity

Probab=98.15  E-value=4.5e-06  Score=68.66  Aligned_cols=69  Identities=13%  Similarity=0.189  Sum_probs=48.8

Q ss_pred             HHHHHHHHHHHc---cCCCcEEEEcCCCCChHHHHHHHHHHH------CCCCHHHHHHHHHHHhcCCCCchhhhhHhhh
Q 028983          127 DMIREALKVLLD---VRNHPVLIHCKRGKHRTGCLVGCLRKL------QKWCLSSVFDEYQRFAAAKARVSDQRGTRIL  196 (201)
Q Consensus       127 ~~i~~~l~~l~~---~~~~pVLVHC~aG~~RTG~vva~~l~~------~g~s~~~ai~ey~~~~~~~~~~~~~~Fie~f  196 (201)
                      ..+.++++.+..   ..++|++|||.+|.||||+++++.++.      ...+..+++..++.. ++.+-..-++|.=.+
T Consensus       153 ~~~~~~~~~v~~~~~~~~~pivVhc~~G~gRsg~f~~~~~~~~~~~~~~~~~v~~~~~~lR~~-R~~~i~~~~qy~f~~  230 (235)
T PF00102_consen  153 ESFLDFIRKVNKSKDDPNGPIVVHCSDGVGRSGTFCAIDILIEQLKKEGEVDVFEIVKKLRQQ-RPGAIQSPEQYRFCY  230 (235)
T ss_dssp             HHHHHHHHHHHHHHSTTSSEEEEESSSSSHHHHHHHHHHHHHHHHHHHSEECHHHHHHHHHTT-STTSSSSHHHHHHHH
T ss_pred             chhhhhhhhccccccCCccceEeecccccccccccccchhhccccccccchhhHHHHHHHHhh-CCCccCCHHHHHHHH
Confidence            445556666543   257999999999999999999988763      357888999988866 444533444554433

Consequently, maintaining an appropriate level of protein tyrosine phosphorylation is essential for many cellular functions. Tyrosine-specific protein phosphatases (PTPase; 3.1.3.48 from EC) catalyse the removal of a phosphate group attached to a tyrosine residue, using a cysteinyl-phosphate enzyme intermediate. These enzymes are key regulatory components in signal transduction pathways (such as the MAP kinase pathway) and cell cycle control, and are important in the control of cell growth, proliferation, differentiation and transformation [, ]. The PTP superfamily can be divided into four subfamilies []: (1) pTyr-specific phosphatases (2) dual specificity phosphatases (dTyr and dSer/dThr) (3) Cdc25 phosphatases (dTyr and/or dThr) (4) LMW (low molecular weight) phosphatases Based on their cellular localisation, PTPases are also classified as: Receptor-like, which are transmembrane receptors that contain PTPase domains [] Non-receptor (intracellular) PTPases [] All PTPases carry the highly conserved active site motif C(X)5R (PTP signature motif), employ a common catalytic mechanism, and share a similar core structure made of a central parallel beta-sheet with flanking alpha-helices containing a beta-loop-alpha-loop that encompasses the PTP signature motif []. Functional diversity between PTPases is endowed by regulatory domains and subunits. This entry repesents several receptor and non-receptor protein-tyrosine phosphatases. Structurally, all known receptor PTPases, are made up of a variable length extracellular domain, followed by a transmembrane region and a C-terminal catalytic cytoplasmic domain. Some of the receptor PTPases contain fibronectin type III (FN-III) repeats, immunoglobulin-like domains, MAM domains or carbonic anhydrase-like domains in their extracellular region. The cytoplasmic region generally contains two copies of the PTPase domain. The first seems to have enzymatic activity, while the second is inactive. The inactive domains of tandem phosphatases can be divided into two classes. Those which bind phosphorylated tyrosine residues may recruit multi-phosphorylated substrates for the adjacent active domains and are more conserved, while the other class have accumulated several variable amino acid substitutions and have a complete loss of tyrosine binding capability. The second class shows a release of evolutionary constraint for the sites around the catalytic centre, which emphasises a difference in function from the first group. There is a region of higher conservation common to both classes, suggesting a new regulatory centre []. PTPase domains consist of about 300 amino acids. There are two conserved cysteines, the second one has been shown to be absolutely required for activity. Furthermore, a number of conserved residues in its immediate vicinity have also been shown to be important.; GO: 0004725 protein tyrosine phosphatase activity, 0006470 protein dephosphorylation; PDB: 3O4T_A 3O4S_A 3O4U_A 2A3K_A 2QDP_A 2QDC_A 2QDM_A 2HVL_A 1ZC0_A 3D44_A ....

>PHA02738 hypothetical protein; Provisional

Probab=98.12  E-value=2e-05  Score=69.54  Aligned_cols=51  Identities=16%  Similarity=0.240  Sum_probs=36.5

Q ss_pred             CCcEEEEcCCCCChHHHHHHHHHHH------CCCCHHHHHHHHHHHhcCCCCchhhhh
Q 028983          141 NHPVLIHCKRGKHRTGCLVGCLRKL------QKWCLSSVFDEYQRFAAAKARVSDQRG  192 (201)
Q Consensus       141 ~~pVLVHC~aG~~RTG~vva~~l~~------~g~s~~~ai~ey~~~~~~~~~~~~~~F  192 (201)
                      .+||+|||.+|.||||+++|+-...      ..++.-+++..++.- |+.......+|
T Consensus       227 ~~PIVVHCs~GiGRtGtFcaidi~i~~~~~~~~vdv~~~V~~lR~q-R~~~vqt~~QY  283 (320)
T PHA02738        227 PPPIVVHCNAGLGRTPCYCVVDISISRFDACATVSIPSIVSSIRNQ-RYYSLFIPFQY  283 (320)
T ss_pred             CCCeEEEcCCCCChhhhhhHHHHHHHHHHhcCCcCHHHHHHHHHhh-hhhccCCHHHH
Confidence            4799999999999999988866432      357788888888866 43343334444

>COG5599 PTP2 Protein tyrosine phosphatase [Signal transduction mechanisms]

Probab=98.08  E-value=2.8e-06  Score=72.62  Aligned_cols=38  Identities=29%  Similarity=0.540  Sum_probs=29.8

Q ss_pred             HHHHHHHHHHHcc--CCCcEEEEcCCCCChHHHHHHHHHH
Q 028983          127 DMIREALKVLLDV--RNHPVLIHCKRGKHRTGCLVGCLRK  164 (201)
Q Consensus       127 ~~i~~~l~~l~~~--~~~pVLVHC~aG~~RTG~vva~~l~  164 (201)
                      ..+.+.++-+...  +.+|++|||.||.||||+++|+-..
T Consensus       202 ~sl~~~~~sl~~sp~~t~piiVHCSAGvGRTGTFIalD~l  241 (302)
T COG5599         202 RSLTEVIHSLNDSPVRTGPIIVHCSAGVGRTGTFIALDIL  241 (302)
T ss_pred             HHHHHHHHHhhcCcCCCCCEEEEeccCCCCcceeeeHHHH
Confidence            4455566666643  7899999999999999999986544

>KOG0791 consensus Protein tyrosine phosphatase, contains fn3 domain [Signal transduction mechanisms]

Probab=97.72  E-value=0.00013  Score=64.88  Aligned_cols=91  Identities=19%  Similarity=0.215  Sum_probs=50.2

Q ss_pred             CCcEE-EEeeeCCCCCCCCCCCHHHHHHHHHHHHccCCCcEEEEcCCCCChHHHHHHHHHHHC---CCCHHHHHHHHHHH
Q 028983          105 NGIKL-FQFAIEGHKEPFVNIPEDMIREALKVLLDVRNHPVLIHCKRGKHRTGCLVGCLRKLQ---KWCLSSVFDEYQRF  180 (201)
Q Consensus       105 ~gi~~-~~ipi~d~~~p~~~i~~~~i~~~l~~l~~~~~~pVLVHC~aG~~RTG~vva~~l~~~---g~s~~~ai~ey~~~  180 (201)
                      ..++. +..-+.|++.|.-..+.-.+..++....+...+|++|||.+|.||||+++|+=+.++   .-...+++.-+...
T Consensus       250 r~ir~f~y~~wPd~gvp~~~~sl~~f~~~~r~~~~~~~~p~iVhCSAGVgRTGTFiald~LLqq~~~~~~vdi~~iv~~l  329 (374)
T KOG0791|consen  250 RKIRHFHYTAWPDFGVPSSTESLLQFVRMVRQSLDTSKGPTIVHCSAGVGRTGTFIALDRLLQQIDSEETVDIFGVVLEL  329 (374)
T ss_pred             ceeEEEEEeeccccCCCCCchhHHHHHHHHHhhcccCCCceeEEeecccccccchHhHHHHHHHhcccccccHHHHHHHh
Confidence            34443 334556666662111112222233333445688999999999999999999887753   22344555544433


Q ss_pred             hcCCC--CchhhhhHhh
Q 028983          181 AAAKA--RVSDQRGTRI  195 (201)
Q Consensus       181 ~~~~~--~~~~~~Fie~  195 (201)
                      +....  ....+||+-+
T Consensus       330 R~~R~~mVqte~Qyvfl  346 (374)
T KOG0791|consen  330 RSARMLMVQTEDQYVFL  346 (374)
T ss_pred             hhccccccchHHHHHHH
Confidence            22222  2355555543

>KOG0789 consensus Protein tyrosine phosphatase [Signal transduction mechanisms]

Probab=97.58  E-value=0.00024  Score=63.84  Aligned_cols=55  Identities=24%  Similarity=0.270  Sum_probs=35.8

Q ss_pred             CCCcEEEEcCCCCChHHHHHHHHHH---H-CC---CCHHHHHHHHHHHhcCCCCchhhhhHhh
Q 028983          140 RNHPVLIHCKRGKHRTGCLVGCLRK---L-QK---WCLSSVFDEYQRFAAAKARVSDQRGTRI  195 (201)
Q Consensus       140 ~~~pVLVHC~aG~~RTG~vva~~l~---~-~g---~s~~~ai~ey~~~~~~~~~~~~~~Fie~  195 (201)
                      ..+|++|||.+|.||||+++++-..   . .+   -..++++...+.- |..+.....+|+-.
T Consensus       298 ~~~P~vVhcsaG~gRtgt~v~~~~~~~~~~~~~~~~~~~~~~~~iR~q-R~~~vqt~~Qy~f~  359 (415)
T KOG0789|consen  298 KQEPIEVHCSAGAGRAGTLVLIEHALIELQGPEGEPPIDEILREIRYQ-RPGAVQSPLQYLFI  359 (415)
T ss_pred             CCCCeEEECCCCCCccchHHHHHHHHHHHhcCCCCccHHHHHHHHHHH-hhhcccchhHHHHH
Confidence            4689999999999999999975522   2 21   3366666655544 55454455555433

>KOG0792 consensus Protein tyrosine phosphatase PTPMEG, contains FERM domain [Signal transduction mechanisms]

Probab=97.51  E-value=0.00032  Score=69.42  Aligned_cols=54  Identities=24%  Similarity=0.339  Sum_probs=35.7

Q ss_pred             HHHHHHHHHHHccC---CCcEEEEcCCCCChHHHHHHH----HHHHC--CCCHHHHHHHHHHH
Q 028983          127 DMIREALKVLLDVR---NHPVLIHCKRGKHRTGCLVGC----LRKLQ--KWCLSSVFDEYQRF  180 (201)
Q Consensus       127 ~~i~~~l~~l~~~~---~~pVLVHC~aG~~RTG~vva~----~l~~~--g~s~~~ai~ey~~~  180 (201)
                      ..+.+++..+...+   +-||+|||.+|.||||+++..    +++.+  .+..-+++.-.+.-
T Consensus      1046 ~~FL~FleevrsvR~~t~pPilvHCSAGiGRTGVlIl~e~~l~lle~Ne~vdi~divr~mR~Q 1108 (1144)
T KOG0792|consen 1046 NDFLDFLEEVRSVRRGTNPPILVHCSAGIGRTGVLILMETALCLLEHNEPVDILDIVRTMRDQ 1108 (1144)
T ss_pred             HHHHHHHHHHHHHhccCCCCeEEEccCCCCcceehHHHHHHHHHHhcCCCCCHHHHHHHHHHH
Confidence            44445666665422   559999999999999987653    33334  45566777755544

>KOG0790 consensus Protein tyrosine phosphatase Corkscrew and related SH2 domain enzymes [Signal transduction mechanisms]

Probab=97.35  E-value=0.00024  Score=64.83  Aligned_cols=52  Identities=19%  Similarity=0.282  Sum_probs=34.2

Q ss_pred             EEEeeeCCCCCCCCCCCHHHHHHHHHHHHcc-----CCCcEEEEcCCCCChHHHHHHHHH
Q 028983          109 LFQFAIEGHKEPFVNIPEDMIREALKVLLDV-----RNHPVLIHCKRGKHRTGCLVGCLR  163 (201)
Q Consensus       109 ~~~ipi~d~~~p~~~i~~~~i~~~l~~l~~~-----~~~pVLVHC~aG~~RTG~vva~~l  163 (201)
                      |+..-+.|++.|.   ..-.+..+|+.+...     .-+||.|||++|.||||+++.+=+
T Consensus       417 yh~~tWPDHGvP~---dPg~vLnFLe~V~~rq~~l~~AgpIvVHCSAGIGrTGTfiViD~  473 (600)
T KOG0790|consen  417 YHYLTWPDHGVPS---DPGGVLNFLEEVNHRQESLMDAGPIVVHCSAGIGRTGTFIVIDM  473 (600)
T ss_pred             hheeecccCCCcC---CccHHHHHHHHhhhhhccccccCcEEEEccCCcCCcceEEEhHH
Confidence            4445556666663   123455577666432     358999999999999997665433

>KOG4228 consensus Protein tyrosine phosphatase [Signal transduction mechanisms]

Probab=97.04  E-value=0.00029  Score=70.04  Aligned_cols=83  Identities=16%  Similarity=0.266  Sum_probs=45.4

Q ss_pred             eCCCCCCCCCCCHHHHHHHHHHHHcc---CCCcEEEEcCCCCChHHHHHHH---HHHHCCCCHHHHHHHHHHHh--cCCC
Q 028983          114 IEGHKEPFVNIPEDMIREALKVLLDV---RNHPVLIHCKRGKHRTGCLVGC---LRKLQKWCLSSVFDEYQRFA--AAKA  185 (201)
Q Consensus       114 i~d~~~p~~~i~~~~i~~~l~~l~~~---~~~pVLVHC~aG~~RTG~vva~---~l~~~g~s~~~ai~ey~~~~--~~~~  185 (201)
                      +.|++.|.   ....+.++++.+...   ..||++|||++|.||||+++++   +.++..-..-+++.-....+  |+.-
T Consensus       703 Wpd~gvPe---~~t~lL~f~rrvk~~~p~~aGPiVVHCSAGvGRTG~fi~iDaml~~~~~e~~vdiy~~v~~lR~QR~~m  779 (1087)
T KOG4228|consen  703 WPDHGVPE---TPTGLLKFRRRVKTFNPPDAGPIVVHCSAGVGRTGCFIVIDAMLDRLECEGKVDIYGHVKTLRRQRNNM  779 (1087)
T ss_pred             CCCCCCcc---cchHHHHHHHHhccCCCcCCCCEEEECCCCCCCcceEEEeHHHHHHHHhhCccceechhHHHHhccccc
Confidence            34445553   123444466666542   4699999999999999987653   33332222233333233232  2333


Q ss_pred             CchhhhhHhhhccc
Q 028983          186 RVSDQRGTRILSPA  199 (201)
Q Consensus       186 ~~~~~~Fie~f~~~  199 (201)
                      ....++|+-..++.
T Consensus       780 VQt~eQYiFi~~Al  793 (1087)
T KOG4228|consen  780 VQTEEQYIFIHEAL  793 (1087)
T ss_pred             cccHHHHHHHHHHH
Confidence            44677777655543

>cd01518 RHOD_YceA Member of the Rhodanese Homology Domain superfamily

Probab=95.63  E-value=0.073  Score=38.29  Aligned_cols=29  Identities=21%  Similarity=0.300  Sum_probs=20.9

Q ss_pred             cCCCcEEEEcCCCCChHHHHHHHHHHHCCCC
Q 028983          139 VRNHPVLIHCKRGKHRTGCLVGCLRKLQKWC  169 (201)
Q Consensus       139 ~~~~pVLVHC~aG~~RTG~vva~~l~~~g~s  169 (201)
                      ..+.+|+|+|.+|. |+...+. ++...|.+
T Consensus        59 ~~~~~ivvyC~~G~-rs~~a~~-~L~~~G~~   87 (101)
T cd01518          59 LKGKKVLMYCTGGI-RCEKASA-YLKERGFK   87 (101)
T ss_pred             cCCCEEEEECCCch-hHHHHHH-HHHHhCCc
Confidence            36789999999984 8876544 45556764

This CD includes Escherichia coli YceA, Bacillus subtilis YbfQ, and similar uncharacterized proteins.

>cd01448 TST_Repeat_1 Thiosulfate sulfurtransferase (TST), N-terminal, inactive domain

Probab=95.58  E-value=0.17  Score=37.45  Aligned_cols=84  Identities=12%  Similarity=0.008  Sum_probs=45.1

Q ss_pred             cEEEEcCCC-CCCCchHHHHhhCCcE-EEEeeeCCCCC----C-CCCCCHHHHHHHHHHHHccCCCcEEEEcCCCCChHH
Q 028983           84 RSIIYLCPE-PYPEANTEFLKSNGIK-LFQFAIEGHKE----P-FVNIPEDMIREALKVLLDVRNHPVLIHCKRGKHRTG  156 (201)
Q Consensus        84 ktII~Lr~e-~~~~~~~~~~~~~gi~-~~~ipi~d~~~----p-~~~i~~~~i~~~l~~l~~~~~~pVLVHC~aG~~RTG  156 (201)
                      -.|||+|+. ++.....++ ....|. -+++|..+...    . ..-.+.+.+.+.+....-..+.+|+|+|..| ++.+
T Consensus        16 ~~ivDvR~~~~~~~~~~~~-~~ghI~ga~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~c~~g-~~~a   93 (122)
T cd01448          16 VRILDARWYLPDRDGRKEY-LEGHIPGAVFFDLDEDLDDKSPGPHMLPSPEEFAELLGSLGISNDDTVVVYDDGG-GFFA   93 (122)
T ss_pred             eEEEEeecCCCCCchhhHH-hhCCCCCCEEcChhhccccCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEECCCC-CccH
Confidence            469999986 221111122 222232 35666544211    0 0112245566666544334689999999997 4555


Q ss_pred             HHHHHHHHHCCCC
Q 028983          157 CLVGCLRKLQKWC  169 (201)
Q Consensus       157 ~vva~~l~~~g~s  169 (201)
                      ..++.++...|++
T Consensus        94 ~~~~~~l~~~G~~  106 (122)
T cd01448          94 ARAWWTLRYFGHE  106 (122)
T ss_pred             HHHHHHHHHcCCC
Confidence            5555666677765

TST contains 2 copies of the Rhodanese Homology Domain; this is the 1st repeat, which does not contain the catalytically active Cys residue. The role of the 1st repeat is uncertain, but it is believed to be involved in protein interaction.

>KOG0793 consensus Protein tyrosine phosphatase [Signal transduction mechanisms]

Probab=95.47  E-value=0.03  Score=53.97  Aligned_cols=41  Identities=20%  Similarity=0.328  Sum_probs=30.5

Q ss_pred             CCCcEEEEcCCCCChHHHHHHHHH----HHCCCCHHHHHHHHHHH
Q 028983          140 RNHPVLIHCKRGKHRTGCLVGCLR----KLQKWCLSSVFDEYQRF  180 (201)
Q Consensus       140 ~~~pVLVHC~aG~~RTG~vva~~l----~~~g~s~~~ai~ey~~~  180 (201)
                      +.-||+|||+.|.||||+.+.+=+    |..|..--+|.+.+...
T Consensus       926 RScpIiVH~sdGaGRTG~YiliDmvl~Rm~kGakeIDIaATlEHl  970 (1004)
T KOG0793|consen  926 RSCPIIVHCSDGAGRTGTYILIDMVLNRMAKGAKEIDIAATLEHL  970 (1004)
T ss_pred             CCCceEEEccCCCCccceeeeHHHHHHHHhccchhhhHHHHHHHH
Confidence            357999999999999997665433    34577766776666665

>PLN02160 thiosulfate sulfurtransferase

Probab=95.22  E-value=0.15  Score=39.30  Aligned_cols=95  Identities=13%  Similarity=0.176  Sum_probs=48.2

Q ss_pred             hhHHHHHhcCCcEEEEcCCCCCCCchHHHHhhCCc---EEEEeeeCCCCCCCCCC-CHHHHHHHHHHHHccCCCcEEEEc
Q 028983           73 ANFSFLQTLRLRSIIYLCPEPYPEANTEFLKSNGI---KLFQFAIEGHKEPFVNI-PEDMIREALKVLLDVRNHPVLIHC  148 (201)
Q Consensus        73 ~~l~~L~~lGIktII~Lr~e~~~~~~~~~~~~~gi---~~~~ipi~d~~~p~~~i-~~~~i~~~l~~l~~~~~~pVLVHC  148 (201)
                      .++..+.+.| ..|||+|+..      ++ ....|   ..+++|..... +.-.+ +.+.+.+... +. ..+.+|++||
T Consensus        20 ~e~~~~~~~~-~~lIDVR~~~------E~-~~ghIpgA~~iniP~~~~~-~~~~l~~~~~~~~~~~-~~-~~~~~IivyC   88 (136)
T PLN02160         20 SQAKTLLQSG-HQYLDVRTQD------EF-RRGHCEAAKIVNIPYMLNT-PQGRVKNQEFLEQVSS-LL-NPADDILVGC   88 (136)
T ss_pred             HHHHHHHhCC-CEEEECCCHH------HH-hcCCCCCcceecccchhcC-cccccCCHHHHHHHHh-cc-CCCCcEEEEC
Confidence            3454444445 3799999862      11 11223   23567763321 10011 1233332222 22 3578999999


Q ss_pred             CCCCChHHHHHHHHHHHCCCC----HHHHHHHHHHH
Q 028983          149 KRGKHRTGCLVGCLRKLQKWC----LSSVFDEYQRF  180 (201)
Q Consensus       149 ~aG~~RTG~vva~~l~~~g~s----~~~ai~ey~~~  180 (201)
                      .+|. |+...+..+ ...|.+    ++.-+.++.+.
T Consensus        89 ~sG~-RS~~Aa~~L-~~~G~~~v~~l~GG~~~W~~~  122 (136)
T PLN02160         89 QSGA-RSLKATTEL-VAAGYKKVRNKGGGYLAWVDH  122 (136)
T ss_pred             CCcH-HHHHHHHHH-HHcCCCCeeecCCcHHHHhhC
Confidence            9994 887664444 455664    34444555433

>cd01523 RHOD_Lact_B Member of the Rhodanese Homology Domain superfamily

Probab=94.49  E-value=0.28  Score=35.02  Aligned_cols=28  Identities=11%  Similarity=0.216  Sum_probs=19.9

Q ss_pred             CCCcEEEEcCCCCChHHHHHHHHHHHCCCC
Q 028983          140 RNHPVLIHCKRGKHRTGCLVGCLRKLQKWC  169 (201)
Q Consensus       140 ~~~pVLVHC~aG~~RTG~vva~~l~~~g~s  169 (201)
                      .+.||+|||.+|. |+..++. .|...|.+
T Consensus        60 ~~~~ivv~C~~G~-rs~~aa~-~L~~~G~~   87 (100)
T cd01523          60 DDQEVTVICAKEG-SSQFVAE-LLAERGYD   87 (100)
T ss_pred             CCCeEEEEcCCCC-cHHHHHH-HHHHcCce
Confidence            5789999999995 7765444 44456764

This CD includes predicted proteins with rhodanese-like domains found N-terminal of the metallo-beta-lactamase domain.

>COG0607 PspE Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]

Probab=94.40  E-value=0.29  Score=35.13  Aligned_cols=75  Identities=13%  Similarity=0.182  Sum_probs=43.2

Q ss_pred             HHHHHhcCCcEEEEcCCCCCCCchHHHHhhCCcE-EEEeeeCCCCCCCCCCCHHHHHHHHHHHHccCCCcEEEEcCCCCC
Q 028983           75 FSFLQTLRLRSIIYLCPEPYPEANTEFLKSNGIK-LFQFAIEGHKEPFVNIPEDMIREALKVLLDVRNHPVLIHCKRGKH  153 (201)
Q Consensus        75 l~~L~~lGIktII~Lr~e~~~~~~~~~~~~~gi~-~~~ipi~d~~~p~~~i~~~~i~~~l~~l~~~~~~pVLVHC~aG~~  153 (201)
                      ...+...+--.|||+|...      ++...+-.. ..++|+.+...-.            .......+.+++|+|++|. 
T Consensus        12 ~~~~~~~~~~~liDvR~~~------e~~~~~i~~~~~~ip~~~~~~~~------------~~~~~~~~~~ivv~C~~G~-   72 (110)
T COG0607          12 AALLLAGEDAVLLDVREPE------EYERGHIPGAAINIPLSELKAAE------------NLLELPDDDPIVVYCASGV-   72 (110)
T ss_pred             HHHhhccCCCEEEeccChh------HhhhcCCCcceeeeecccchhhh------------cccccCCCCeEEEEeCCCC-
Confidence            3445566678899999861      111112223 6777776642210            0000246899999999996 


Q ss_pred             hHHHHHHHHHHHCCCC
Q 028983          154 RTGCLVGCLRKLQKWC  169 (201)
Q Consensus       154 RTG~vva~~l~~~g~s  169 (201)
                      |++..+. +|..+|.+
T Consensus        73 rS~~aa~-~L~~~G~~   87 (110)
T COG0607          73 RSAAAAA-ALKLAGFT   87 (110)
T ss_pred             ChHHHHH-HHHHcCCc
Confidence            8865444 45555533

>KOG4228 consensus Protein tyrosine phosphatase [Signal transduction mechanisms]

Probab=94.32  E-value=0.024  Score=56.85  Aligned_cols=30  Identities=27%  Similarity=0.548  Sum_probs=24.5

Q ss_pred             CCCcEEEEcCCCCChHHHHHHHHHHHCCCC
Q 028983          140 RNHPVLIHCKRGKHRTGCLVGCLRKLQKWC  169 (201)
Q Consensus       140 ~~~pVLVHC~aG~~RTG~vva~~l~~~g~s  169 (201)
                      ..+|+.|||..|.+|||+++|+-.....+.
T Consensus      1017 ~~~P~~Vhc~nG~~rsg~f~ai~~l~e~~~ 1046 (1087)
T KOG4228|consen 1017 ADGPIIVHCLNGVGRTGTFCAISILLERMR 1046 (1087)
T ss_pred             CCCCEEEEEcCCCcceeehHHHHHHHHHHh
Confidence            489999999999999999988776653333

>cd01533 4RHOD_Repeat_2 Member of the Rhodanese Homology Domain superfamily, repeat 2

Probab=94.06  E-value=0.15  Score=37.15  Aligned_cols=42  Identities=10%  Similarity=-0.011  Sum_probs=27.3

Q ss_pred             HHHHHHHHHHHHccCCCcEEEEcCCCCChHHHHHHHHHHHCCCC
Q 028983          126 EDMIREALKVLLDVRNHPVLIHCKRGKHRTGCLVGCLRKLQKWC  169 (201)
Q Consensus       126 ~~~i~~~l~~l~~~~~~pVLVHC~aG~~RTG~vva~~l~~~g~s  169 (201)
                      ...+...+..+....+.||+|||.+|. |+.. ++..+...|.+
T Consensus        51 ~~~l~~~~~~l~~~~~~~ivv~C~~G~-rs~~-a~~~L~~~G~~   92 (109)
T cd01533          51 GAELVLRVGELAPDPRTPIVVNCAGRT-RSII-GAQSLINAGLP   92 (109)
T ss_pred             HHHHHHHHHhcCCCCCCeEEEECCCCc-hHHH-HHHHHHHCCCC
Confidence            345555555553335789999999996 8754 44555666764

This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. This CD aligns the 2nd repeat which does contain the putative catalytic Cys residue.

>KOG4471 consensus Phosphatidylinositol 3-phosphate 3-phosphatase myotubularin MTM1 [Lipid transport and metabolism; Intracellular trafficking, secretion, and vesicular transport]

Probab=94.05  E-value=0.066  Score=50.80  Aligned_cols=26  Identities=35%  Similarity=0.504  Sum_probs=21.3

Q ss_pred             cCCCcEEEEcCCCCChHHHHHHHHHH
Q 028983          139 VRNHPVLIHCKRGKHRTGCLVGCLRK  164 (201)
Q Consensus       139 ~~~~pVLVHC~aG~~RTG~vva~~l~  164 (201)
                      ....||||||+.|.|||.-++++-+.
T Consensus       372 ~~~~sVlVHCSDGWDRT~QlvsLA~L  397 (717)
T KOG4471|consen  372 SESRSVLVHCSDGWDRTAQLVSLAML  397 (717)
T ss_pred             cCCceEEEEcCCCccchHHHHHHHHH
Confidence            46899999999999999977665443

>PF06602 Myotub-related: Myotubularin-like phosphatase domain; InterPro: IPR010569 This family represents a region within eukaryotic myotubularin-related proteins that is sometimes found with IPR004182 from INTERPRO

Probab=93.95  E-value=0.11  Score=46.57  Aligned_cols=27  Identities=33%  Similarity=0.479  Sum_probs=21.8

Q ss_pred             cCCCcEEEEcCCCCChHHHHHHHHHHH
Q 028983          139 VRNHPVLIHCKRGKHRTGCLVGCLRKL  165 (201)
Q Consensus       139 ~~~~pVLVHC~aG~~RTG~vva~~l~~  165 (201)
                      ..+.+|||||..|.|||..++++.+.+
T Consensus       229 ~~~~~Vlvh~~dGwDrt~q~~sL~ql~  255 (353)
T PF06602_consen  229 DEGSSVLVHCSDGWDRTSQLSSLAQLL  255 (353)
T ss_dssp             TT--EEEEECTTSSSHHHHHHHHHHHH
T ss_pred             ccCceEEEEcCCCCcccHHHHHHHHHH
Confidence            378999999999999999998877664

Myotubularin is a dual-specific lipid phosphatase that dephosphorylates phosphatidylinositol 3-phosphate and phosphatidylinositol (3,5)-bi-phosphate []. Mutations in gene encoding myotubularin-related proteins have been associated with disease [].; GO: 0016791 phosphatase activity, 0016311 dephosphorylation; PDB: 1M7R_B 1LW3_A 1ZVR_A 1ZSQ_A 2YF0_A.

>cd01519 RHOD_HSP67B2 Member of the Rhodanese Homology Domain superfamily

Probab=93.72  E-value=0.35  Score=34.71  Aligned_cols=76  Identities=13%  Similarity=0.263  Sum_probs=40.3

Q ss_pred             cEEEEcCCCCCCCchHHHHhhCCcE-EEEeeeCCCCCCCCCCCHHHHHHHHHHHHccCCCcEEEEcCCCCChHHHHHHHH
Q 028983           84 RSIIYLCPEPYPEANTEFLKSNGIK-LFQFAIEGHKEPFVNIPEDMIREALKVLLDVRNHPVLIHCKRGKHRTGCLVGCL  162 (201)
Q Consensus        84 ktII~Lr~e~~~~~~~~~~~~~gi~-~~~ipi~d~~~p~~~i~~~~i~~~l~~l~~~~~~pVLVHC~aG~~RTG~vva~~  162 (201)
                      ..|||+|+..      ++ ....|. -+++|+...... ...+.+.+.+.+......++.+|+|+|..|. |+.. ++.+
T Consensus        16 ~~iiDvR~~~------e~-~~ghIpgA~~ip~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ivv~c~~g~-~s~~-~~~~   85 (106)
T cd01519          16 KVLIDVREPE------EL-KTGKIPGAINIPLSSLPDA-LALSEEEFEKKYGFPKPSKDKELIFYCKAGV-RSKA-AAEL   85 (106)
T ss_pred             EEEEECCCHH------HH-hcCcCCCcEEechHHhhhh-hCCCHHHHHHHhcccCCCCCCeEEEECCCcH-HHHH-HHHH
Confidence            5799999851      11 111121 245565432111 0122344555554432245789999999985 7644 4455


Q ss_pred             HHHCCCC
Q 028983          163 RKLQKWC  169 (201)
Q Consensus       163 l~~~g~s  169 (201)
                      +...|..
T Consensus        86 l~~~G~~   92 (106)
T cd01519          86 ARSLGYE   92 (106)
T ss_pred             HHHcCCc
Confidence            5566764

This CD includes the heat shock protein 67B2 of Drosophila melanogaster and other similar proteins, many of which are uncharacterized.

>PF04179 Init_tRNA_PT: Initiator tRNA phosphoribosyl transferase ; InterPro: IPR007306 This enzyme (2

Probab=93.62  E-value=0.2  Score=46.39  Aligned_cols=101  Identities=16%  Similarity=0.239  Sum_probs=58.0

Q ss_pred             ccccceEecCCCChhhH--HHH--HhcCCcEEEEcCCCCCCCchHHHHhhCCcEEEEeeeCCCCCCCCCCCHHHHHHHHH
Q 028983           59 MVDNGIFRSGFPDSANF--SFL--QTLRLRSIIYLCPEPYPEANTEFLKSNGIKLFQFAIEGHKEPFVNIPEDMIREALK  134 (201)
Q Consensus        59 ~V~~~Lyrsg~p~~~~l--~~L--~~lGIktII~Lr~e~~~~~~~~~~~~~gi~~~~ipi~d~~~p~~~i~~~~i~~~l~  134 (201)
                      .++.+||.|.......+  ..+  ....+..||++.+.....    ......-.++|+|+...+.....+ ...+-++..
T Consensus       291 ~~~~~i~ig~~~~~l~~~~~~~~~~~~~~~~vI~~s~~~~~~----~~~~~~~~~L~l~i~~~K~gs~~L-R~~LP~i~~  365 (451)
T PF04179_consen  291 PGTTGIYIGKISSNLAISKAQLPDLESEFDCVINCSESPTPK----ESWPKSPKYLHLPIPSSKKGSRDL-RKALPKICS  365 (451)
T ss_pred             cCCCCeEEeccCCccccchhhccccCCCcCEEEEcCCCcccc----cccCCCceEEeCcCCCCcccHHHH-HHHHHHHHH
Confidence            35566887766552211  112  234677899999774321    112346789999998865432111 223333333


Q ss_pred             HHHc----cCCCcEEEEcCCCCChHH-HHHHHHHH
Q 028983          135 VLLD----VRNHPVLIHCKRGKHRTG-CLVGCLRK  164 (201)
Q Consensus       135 ~l~~----~~~~pVLVHC~aG~~RTG-~vva~~l~  164 (201)
                      ++..    ..+.+|||+|..|+|.+. ++.|++..
T Consensus       366 fv~~~L~~~~~~~iLV~C~sGkDlSVgVaLaILc~  400 (451)
T PF04179_consen  366 FVRSHLSSDPGKPILVCCDSGKDLSVGVALAILCK  400 (451)
T ss_pred             HHHHHhcccCCCcEEEEcCCcchHHHHHHHHHHHH
Confidence            3322    137899999999999985 44444444

4.2 from EC) modifies exclusively the initiator tRNA in position 64 using 5'-phosphoribosyl-1'-pyrophosphate as the modification donor. As the initiator tRNA participates both in the initiation and elongation of translation, the 2'-O-ribosyl phosphate modification discriminates the initiator tRNAs from the elongator tRNAs. ; GO: 0016763 transferase activity, transferring pentosyl groups

>KOG1530 consensus Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]

Probab=93.36  E-value=0.45  Score=36.94  Aligned_cols=79  Identities=9%  Similarity=0.012  Sum_probs=45.5

Q ss_pred             HHHHhcCCcEEEEcCCCCCCCchHHHHhhCCc-EEEEeeeCCCCCCCCCCCHHHHHHHHHHHHccCCCcEEEEcCCCCCh
Q 028983           76 SFLQTLRLRSIIYLCPEPYPEANTEFLKSNGI-KLFQFAIEGHKEPFVNIPEDMIREALKVLLDVRNHPVLIHCKRGKHR  154 (201)
Q Consensus        76 ~~L~~lGIktII~Lr~e~~~~~~~~~~~~~gi-~~~~ipi~d~~~p~~~i~~~~i~~~l~~l~~~~~~pVLVHC~aG~~R  154 (201)
                      ..|-..|=+..||+|..+       .++..++ .-++||........ .+....+.+-+..........|+|||+.|+ |
T Consensus        31 k~L~~~~~~~llDVRepe-------Efk~gh~~~siNiPy~~~~~~~-~l~~~eF~kqvg~~kp~~d~eiIf~C~SG~-R  101 (136)
T KOG1530|consen   31 KNLLQHPDVVLLDVREPE-------EFKQGHIPASINIPYMSRPGAG-ALKNPEFLKQVGSSKPPHDKEIIFGCASGV-R  101 (136)
T ss_pred             HHHhcCCCEEEEeecCHH-------HhhccCCcceEecccccccccc-ccCCHHHHHHhcccCCCCCCcEEEEeccCc-c
Confidence            334455668889999752       2233344 46888886543221 222333343444443344668999999997 8


Q ss_pred             HHHHHHHHH
Q 028983          155 TGCLVGCLR  163 (201)
Q Consensus       155 TG~vva~~l  163 (201)
                      +....-.++
T Consensus       102 s~~A~~~l~  110 (136)
T KOG1530|consen  102 SLKATKILV  110 (136)
T ss_pred             hhHHHHHHH
Confidence            866544433

>PRK01415 hypothetical protein; Validated

Probab=92.57  E-value=0.51  Score=40.39  Aligned_cols=40  Identities=18%  Similarity=0.200  Sum_probs=26.7

Q ss_pred             cCCCcEEEEcCCCCChHHHHHHHHHHHCCCC----HHHHHHHHHHH
Q 028983          139 VRNHPVLIHCKRGKHRTGCLVGCLRKLQKWC----LSSVFDEYQRF  180 (201)
Q Consensus       139 ~~~~pVLVHC~aG~~RTG~vva~~l~~~g~s----~~~ai~ey~~~  180 (201)
                      ..+.||+++|++|. |+...+ .+|..+|..    ++.=+..|...
T Consensus       169 ~k~k~Iv~yCtgGi-Rs~kAa-~~L~~~Gf~~Vy~L~GGi~~w~~~  212 (247)
T PRK01415        169 LKGKKIAMVCTGGI-RCEKST-SLLKSIGYDEVYHLKGGILQYLED  212 (247)
T ss_pred             cCCCeEEEECCCCh-HHHHHH-HHHHHcCCCcEEEechHHHHHHHh
Confidence            36789999999995 876554 455666765    44444556554

>PF00581 Rhodanese: Rhodanese-like domain This Prosite entry represents a subset of this family

Probab=92.57  E-value=1.3  Score=31.54  Aligned_cols=81  Identities=16%  Similarity=0.220  Sum_probs=44.0

Q ss_pred             hhHHHHHhcCCcEEEEcCCCCCCCchHHHHhhCCcE-EEEeeeCCCCCCCCCCCHHHHHHHHHHHHc--cCCCcEEEEcC
Q 028983           73 ANFSFLQTLRLRSIIYLCPEPYPEANTEFLKSNGIK-LFQFAIEGHKEPFVNIPEDMIREALKVLLD--VRNHPVLIHCK  149 (201)
Q Consensus        73 ~~l~~L~~lGIktII~Lr~e~~~~~~~~~~~~~gi~-~~~ipi~d~~~p~~~i~~~~i~~~l~~l~~--~~~~pVLVHC~  149 (201)
                      +++..+-..+=-.|||.|+..      ++ ....|. -+++|+............+.+...+.....  .++.+|+++|.
T Consensus         3 ~el~~~l~~~~~~liD~R~~~------~~-~~~hI~ga~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~yc~   75 (113)
T PF00581_consen    3 EELKEMLENESVLLIDVRSPE------EY-ERGHIPGAVNIPFPSLDPDEPSLSEDKLDEFLKELGKKIDKDKDIVFYCS   75 (113)
T ss_dssp             HHHHHHHTTTTEEEEEESSHH------HH-HHSBETTEEEEEGGGGSSSSSBCHHHHHHHHHHHHTHGSTTTSEEEEEES
T ss_pred             HHHHhhhhCCCeEEEEeCCHH------HH-HcCCCCCCccccccccccccccccccccccccccccccccccccceeeee
Confidence            334333344566799999751      22 222332 478888543111112224445544444433  35678999997


Q ss_pred             CCCChHHHHHHH
Q 028983          150 RGKHRTGCLVGC  161 (201)
Q Consensus       150 aG~~RTG~vva~  161 (201)
                      .|. |++..+++
T Consensus        76 ~~~-~~~~~~~~   86 (113)
T PF00581_consen   76 SGW-RSGSAAAA   86 (113)
T ss_dssp             SSC-HHHHHHHH
T ss_pred             ccc-ccchhHHH
Confidence            775 77766665

; InterPro: IPR001763 Rhodanese, a sulphurtransferase involved in cyanide detoxification (see IPR001307 from INTERPRO) shares evolutionary relationship with a large family of proteins [], including Cdc25 phosphatase catalytic domain. non-catalytic domains of eukaryotic dual-specificity MAPK-phosphatases. non-catalytic domains of yeast PTP-type MAPK-phosphatases. non-catalytic domains of yeast Ubp4, Ubp5, Ubp7. non-catalytic domains of mammalian Ubp-Y. Drosophila heat shock protein HSP-67BB. several bacterial cold-shock and phage shock proteins. plant senescence associated proteins. catalytic and non-catalytic domains of rhodanese (see IPR001307 from INTERPRO). Rhodanese has an internal duplication. This domain is found as a single copy in other proteins, including phosphatases and ubiquitin C-terminal hydrolases [].; PDB: 2J6P_D 2FSX_A 1UAR_A 1OKG_A 1GMX_A 1GN0_A 3NTD_B 3NTA_B 3NT6_A 1C25_A ....

>PF04343 DUF488: Protein of unknown function, DUF488; InterPro: IPR007438 This family includes several proteins of uncharacterised function

Probab=92.49  E-value=0.57  Score=35.28  Aligned_cols=42  Identities=21%  Similarity=0.349  Sum_probs=32.7

Q ss_pred             HHHHHhcCCcEEEEcCCCCCC-------CchHHHHhhCCcEEEEeeeCC
Q 028983           75 FSFLQTLRLRSIIYLCPEPYP-------EANTEFLKSNGIKLFQFAIEG  116 (201)
Q Consensus        75 l~~L~~lGIktII~Lr~e~~~-------~~~~~~~~~~gi~~~~ipi~d  116 (201)
                      ++.|+..||+.+||+|.-+.+       +.+..++...||.|+|+|--+
T Consensus         6 ~~~l~~~~i~~lVDVR~~P~S~~~~~~k~~l~~~l~~~gi~Y~~~~~Lg   54 (122)
T PF04343_consen    6 YDLLKKNGIRVLVDVRLWPRSRKPGFNKEDLASFLEEAGIEYVWLPELG   54 (122)
T ss_pred             HHHHHHCCCeEEEEECCCCCCCCCCCCHHHHHHHHHHCCceEeechhhc
Confidence            467899999999999976542       234567778899999998754

>smart00450 RHOD Rhodanese Homology Domain

Probab=92.22  E-value=0.95  Score=31.08  Aligned_cols=29  Identities=21%  Similarity=0.480  Sum_probs=18.8

Q ss_pred             cCCCcEEEEcCCCCChHHHHHHHHHHHCCCC
Q 028983          139 VRNHPVLIHCKRGKHRTGCLVGCLRKLQKWC  169 (201)
Q Consensus       139 ~~~~pVLVHC~aG~~RTG~vva~~l~~~g~s  169 (201)
                      ..+.+|+|+|..|. |+ ..++.++...|..
T Consensus        54 ~~~~~iv~~c~~g~-~a-~~~~~~l~~~G~~   82 (100)
T smart00450       54 DKDKPVVVYCRSGN-RS-AKAAWLLRELGFK   82 (100)
T ss_pred             CCCCeEEEEeCCCc-HH-HHHHHHHHHcCCC
Confidence            46789999997664 65 3344445555654

An alpha beta fold found duplicated in the Rhodanese protein. The the Cysteine containing enzymatically active version of the domain is also found in the CDC25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and stress proteins such as Senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions with a loss of the cysteine are also seen in Dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases. These are likely to play a role in protein interactions.

>PRK00142 putative rhodanese-related sulfurtransferase; Provisional

Probab=90.78  E-value=1.2  Score=39.32  Aligned_cols=39  Identities=18%  Similarity=0.222  Sum_probs=26.2

Q ss_pred             CCCcEEEEcCCCCChHHHHHHHHHHHCCCC----HHHHHHHHHHH
Q 028983          140 RNHPVLIHCKRGKHRTGCLVGCLRKLQKWC----LSSVFDEYQRF  180 (201)
Q Consensus       140 ~~~pVLVHC~aG~~RTG~vva~~l~~~g~s----~~~ai~ey~~~  180 (201)
                      .+.||+|||++|. |+...+ .+|..+|.+    ++.=+..|...
T Consensus       170 kdk~IvvyC~~G~-Rs~~aa-~~L~~~Gf~~V~~L~GGi~~w~~~  212 (314)
T PRK00142        170 KDKKVVMYCTGGI-RCEKAS-AWMKHEGFKEVYQLEGGIITYGED  212 (314)
T ss_pred             CcCeEEEECCCCc-HHHHHH-HHHHHcCCCcEEEecchHHHHHHh
Confidence            5789999999995 887654 455567775    34444455544

>KOG1089 consensus Myotubularin-related phosphatidylinositol 3-phosphate 3-phosphatase MTM6 [General function prediction only]

Probab=90.66  E-value=0.36  Score=45.84  Aligned_cols=26  Identities=31%  Similarity=0.468  Sum_probs=22.9

Q ss_pred             CCCcEEEEcCCCCChHHHHHHHHHHH
Q 028983          140 RNHPVLIHCKRGKHRTGCLVGCLRKL  165 (201)
Q Consensus       140 ~~~pVLVHC~aG~~RTG~vva~~l~~  165 (201)
                      .+.+|||||..|.|||..|+.+...+
T Consensus       343 ~~~sVlvhcsdGwDrT~qV~SLaQll  368 (573)
T KOG1089|consen  343 EGASVLVHCSDGWDRTCQVSSLAQLL  368 (573)
T ss_pred             CCCeEEEEccCCcchhHHHHHHHHHH
Confidence            56899999999999999999887654

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=89.55  E-value=0.95  Score=40.85  Aligned_cols=26  Identities=15%  Similarity=0.186  Sum_probs=18.7

Q ss_pred             CcEEEEcCCCCChHHHHHHHHHHHCCCC
Q 028983          142 HPVLIHCKRGKHRTGCLVGCLRKLQKWC  169 (201)
Q Consensus       142 ~pVLVHC~aG~~RTG~vva~~l~~~g~s  169 (201)
                      .||+|||.+|. ||...+ .+|..+|++
T Consensus       333 ~~Ivv~C~sG~-RS~~Aa-~~L~~~G~~  358 (370)
T PRK05600        333 DNVVVYCASGI-RSADFI-EKYSHLGHE  358 (370)
T ss_pred             CcEEEECCCCh-hHHHHH-HHHHHcCCC
Confidence            39999999995 877654 445556663

>cd01527 RHOD_YgaP Member of the Rhodanese Homology Domain superfamily

Probab=89.01  E-value=2.6  Score=29.76  Aligned_cols=27  Identities=19%  Similarity=0.261  Sum_probs=18.0

Q ss_pred             CCCcEEEEcCCCCChHHHHHHHHHHHCCC
Q 028983          140 RNHPVLIHCKRGKHRTGCLVGCLRKLQKW  168 (201)
Q Consensus       140 ~~~pVLVHC~aG~~RTG~vva~~l~~~g~  168 (201)
                      .+.+|+++|..|. |+..++.. |..+|.
T Consensus        53 ~~~~iv~~c~~g~-~s~~~~~~-L~~~g~   79 (99)
T cd01527          53 GANAIIFHCRSGM-RTQQNAER-LAAISA   79 (99)
T ss_pred             CCCcEEEEeCCCc-hHHHHHHH-HHHcCC
Confidence            5789999999985 76654444 333343

This CD includes Escherichia coli YgaP, and similar uncharacterized putative rhodanese-related sulfurtransferases.

>cd01522 RHOD_1 Member of the Rhodanese Homology Domain superfamily, subgroup 1

Probab=88.61  E-value=4.8  Score=29.73  Aligned_cols=29  Identities=21%  Similarity=0.455  Sum_probs=19.8

Q ss_pred             cCCCcEEEEcCCCCChHHHHHHHHHHHCCCC
Q 028983          139 VRNHPVLIHCKRGKHRTGCLVGCLRKLQKWC  169 (201)
Q Consensus       139 ~~~~pVLVHC~aG~~RTG~vva~~l~~~g~s  169 (201)
                      ..+.+|+|+|..|. |+...+.. +...|.+
T Consensus        62 ~~~~~ivv~C~~G~-rs~~aa~~-L~~~G~~   90 (117)
T cd01522          62 GKDRPVLLLCRSGN-RSIAAAEA-AAQAGFT   90 (117)
T ss_pred             CCCCeEEEEcCCCc-cHHHHHHH-HHHCCCC
Confidence            36789999999985 87765444 3445543

This CD includes the putative rhodanese-related sulfurtransferases of several uncharacterized proteins.

>PF14671 DSPn: Dual specificity protein phosphatase, N-terminal half; PDB: 1OHD_A 1OHE_A 1OHC_A

Probab=87.92  E-value=1.2  Score=34.92  Aligned_cols=56  Identities=7%  Similarity=0.067  Sum_probs=31.9

Q ss_pred             CHHHHHHHHHHHHc-----cCCCcEEEEcCCCCCh----HHHHHHHHHH-HCCCCHHHHHHHHHHH
Q 028983          125 PEDMIREALKVLLD-----VRNHPVLIHCKRGKHR----TGCLVGCLRK-LQKWCLSSVFDEYQRF  180 (201)
Q Consensus       125 ~~~~i~~~l~~l~~-----~~~~pVLVHC~aG~~R----TG~vva~~l~-~~g~s~~~ai~ey~~~  180 (201)
                      +..++-++...+.+     ...+..+|||++...+    +.+++++|++ ++|||.++|++-+...
T Consensus        45 nL~~lyrfc~~l~~~L~~~~~~~k~iv~yts~d~~kRaNAA~Lig~y~Vi~l~~spe~A~~~l~~~  110 (141)
T PF14671_consen   45 NLAQLYRFCCKLNKKLKSPELKKKKIVHYTSSDPKKRANAAFLIGAYAVIYLGMSPEEAYKPLASI  110 (141)
T ss_dssp             -HHHHHHHHHHHHHHHH-GGGTTSEEEEEE-S-HHHHHHHHHHHHHHHHHTS---HHHHHHHHTTT
T ss_pred             cHHHHHHHHHHHHHHHcCHHhcCCeEEEECCCChhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHhc
Confidence            34555555444332     2356788887665544    4688888988 5799999998755543

>PRK05320 rhodanese superfamily protein; Provisional

Probab=87.43  E-value=2.2  Score=36.60  Aligned_cols=28  Identities=14%  Similarity=0.019  Sum_probs=20.6

Q ss_pred             CCCcEEEEcCCCCChHHHHHHHHHHHCCCC
Q 028983          140 RNHPVLIHCKRGKHRTGCLVGCLRKLQKWC  169 (201)
Q Consensus       140 ~~~pVLVHC~aG~~RTG~vva~~l~~~g~s  169 (201)
                      .+.||+++|++|. |+..++. +|...|.+
T Consensus       174 kdk~IvvyC~~G~-Rs~~Aa~-~L~~~Gf~  201 (257)
T PRK05320        174 AGKTVVSFCTGGI-RCEKAAI-HMQEVGID  201 (257)
T ss_pred             CCCeEEEECCCCH-HHHHHHH-HHHHcCCc
Confidence            5789999999995 8876554 45556664

>PRK11784 tRNA 2-selenouridine synthase; Provisional

Probab=86.51  E-value=3.6  Score=36.83  Aligned_cols=29  Identities=31%  Similarity=0.324  Sum_probs=20.0

Q ss_pred             CCCcEEEEcCCCCChHHHHHHHHHHHCCCC
Q 028983          140 RNHPVLIHCKRGKHRTGCLVGCLRKLQKWC  169 (201)
Q Consensus       140 ~~~pVLVHC~aG~~RTG~vva~~l~~~g~s  169 (201)
                      ++.+|+|+|..|-.|++.++-.+ ...|+.
T Consensus        87 ~~~~ivvyC~rgG~RS~~aa~~L-~~~G~~  115 (345)
T PRK11784         87 ANPRGLLYCWRGGLRSGSVQQWL-KEAGID  115 (345)
T ss_pred             CCCeEEEEECCCChHHHHHHHHH-HHcCCC
Confidence            67899999975546988865444 455653

>TIGR02981 phageshock_pspE phage shock operon rhodanese PspE

Probab=86.20  E-value=1.5  Score=32.01  Aligned_cols=74  Identities=18%  Similarity=0.260  Sum_probs=41.2

Q ss_pred             HHHHhcCCcEEEEcCCCCCCCchHHHHhhCCcEEEEeeeCCCCCCCCCCCHHHHHHHHHHHHccCCCcEEEEcCCCCChH
Q 028983           76 SFLQTLRLRSIIYLCPEPYPEANTEFLKSNGIKLFQFAIEGHKEPFVNIPEDMIREALKVLLDVRNHPVLIHCKRGKHRT  155 (201)
Q Consensus        76 ~~L~~lGIktII~Lr~e~~~~~~~~~~~~~gi~~~~ipi~d~~~p~~~i~~~~i~~~l~~l~~~~~~pVLVHC~aG~~RT  155 (201)
                      ..|.-..-..+||+|+..      ++. ..     |+|  +    .++++...+.+.+..+....+.+|+++|.+|. |+
T Consensus        11 ~~~~~~~~~~lIDvR~~~------ef~-~g-----hIp--g----Ainip~~~l~~~l~~~~~~~~~~vvlyC~~G~-rS   71 (101)
T TIGR02981        11 FALPLFAAEHWIDVRIPE------QYQ-QE-----HIQ--G----AINIPLKEIKEHIATAVPDKNDTVKLYCNAGR-QS   71 (101)
T ss_pred             HhhhhccCCEEEECCCHH------HHh-cC-----CCC--C----CEECCHHHHHHHHHHhCCCCCCeEEEEeCCCH-HH
Confidence            344445667799999862      111 11     222  1    01233445555555543335788999999995 77


Q ss_pred             HHHHHHHHHHCCCC
Q 028983          156 GCLVGCLRKLQKWC  169 (201)
Q Consensus       156 G~vva~~l~~~g~s  169 (201)
                      ...+ .++...|.+
T Consensus        72 ~~aa-~~L~~~G~~   84 (101)
T TIGR02981        72 GMAK-DILLDMGYT   84 (101)
T ss_pred             HHHH-HHHHHcCCC
Confidence            6654 344455654

Members of this very narrowly defined protein family are proteins active as rhodanese (EC 2.8.1.1) and found in the extended variants of the phage shock protein (psp operon) in Escherichia coli and a few closely related species. Note that the designation phage shock protein PspE has been applied, incorrectly, in many instances where the genome lacks the phage shock regulon entirely.

>cd01534 4RHOD_Repeat_3 Member of the Rhodanese Homology Domain superfamily, repeat 3

Probab=85.42  E-value=2.5  Score=29.75  Aligned_cols=28  Identities=14%  Similarity=0.242  Sum_probs=19.5

Q ss_pred             CCCcEEEEcCCCCChHHHHHHHHHHHCCCC
Q 028983          140 RNHPVLIHCKRGKHRTGCLVGCLRKLQKWC  169 (201)
Q Consensus       140 ~~~pVLVHC~aG~~RTG~vva~~l~~~g~s  169 (201)
                      .+.+|+++|.+|. |+... +.++...|.+
T Consensus        55 ~~~~iv~~c~~G~-rs~~a-a~~L~~~G~~   82 (95)
T cd01534          55 RGARIVLADDDGV-RADMT-ASWLAQMGWE   82 (95)
T ss_pred             CCCeEEEECCCCC-hHHHH-HHHHHHcCCE
Confidence            4688999999985 77544 4444556664

This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. This CD aligns the 3rd repeat which does not contain the putative catalytic Cys residue.

>cd01443 Cdc25_Acr2p Cdc25 enzymes are members of the Rhodanese Homology Domain (RHOD) superfamily

Probab=85.12  E-value=5.3  Score=29.12  Aligned_cols=21  Identities=10%  Similarity=0.085  Sum_probs=14.7

Q ss_pred             CCCcEEEEcCCCCChHHHHHH
Q 028983          140 RNHPVLIHCKRGKHRTGCLVG  160 (201)
Q Consensus       140 ~~~pVLVHC~aG~~RTG~vva  160 (201)
                      ...+|++||..|-.|+...+.
T Consensus        65 ~~~~iv~~C~~~g~rs~~a~~   85 (113)
T cd01443          65 GVKLAIFYCGSSQGRGPRAAR   85 (113)
T ss_pred             CCCEEEEECCCCCcccHHHHH
Confidence            467899999976457655443

Also included in this CD are eukaryotic arsenate resistance proteins such as Saccharomyces cerevisiae Acr2p and similar proteins. Cdc25 phosphatases activate the cell division kinases throughout the cell cycle progression. Cdc25 phosphatases dephosphorylate phosphotyrosine and phosphothreonine residues, in order to activate their Cdk/cyclin substrates. The Cdc25 and Acr2p RHOD domains have the signature motif (H/YCxxxxxR).

>PRK00162 glpE thiosulfate sulfurtransferase; Validated

Probab=83.59  E-value=9.8  Score=27.35  Aligned_cols=39  Identities=18%  Similarity=0.297  Sum_probs=25.0

Q ss_pred             HHHHHHHHHHHccCCCcEEEEcCCCCChHHHHHHHHHHHCCCC
Q 028983          127 DMIREALKVLLDVRNHPVLIHCKRGKHRTGCLVGCLRKLQKWC  169 (201)
Q Consensus       127 ~~i~~~l~~l~~~~~~pVLVHC~aG~~RTG~vva~~l~~~g~s  169 (201)
                      ..+.+.+..+ + .+.+++|+|..|. |+.. ++..|...|++
T Consensus        46 ~~l~~~~~~~-~-~~~~ivv~c~~g~-~s~~-a~~~L~~~G~~   84 (108)
T PRK00162         46 DSLGAFMRQA-D-FDTPVMVMCYHGN-SSQG-AAQYLLQQGFD   84 (108)
T ss_pred             HHHHHHHHhc-C-CCCCEEEEeCCCC-CHHH-HHHHHHHCCch
Confidence            4455555543 2 5789999999985 6543 44455566765

>PRK10287 thiosulfate:cyanide sulfurtransferase; Provisional

Probab=83.31  E-value=3.5  Score=30.33  Aligned_cols=42  Identities=17%  Similarity=0.294  Sum_probs=25.3

Q ss_pred             HHHHHHHHHHHHccCCCcEEEEcCCCCChHHHHHHHHHHHCCCC
Q 028983          126 EDMIREALKVLLDVRNHPVLIHCKRGKHRTGCLVGCLRKLQKWC  169 (201)
Q Consensus       126 ~~~i~~~l~~l~~~~~~pVLVHC~aG~~RTG~vva~~l~~~g~s  169 (201)
                      ...+.+.++.+....+.+|+++|.+| .|+...+-.+ ...|.+
T Consensus        45 ~~~l~~~l~~l~~~~~~~IVlyC~~G-~rS~~aa~~L-~~~G~~   86 (104)
T PRK10287         45 LKEVKERIATAVPDKNDTVKLYCNAG-RQSGQAKEIL-SEMGYT   86 (104)
T ss_pred             HHHHHHHHHhcCCCCCCeEEEEeCCC-hHHHHHHHHH-HHcCCC
Confidence            34455555554333567899999988 4776654433 445554

>TIGR02990 ectoine_eutA ectoine utilization protein EutA

Probab=82.46  E-value=9.1  Score=32.45  Aligned_cols=94  Identities=19%  Similarity=0.303  Sum_probs=66.3

Q ss_pred             hhHHHHHhcCCcEEEEcCCCC--CCCchHHHHhhCCcEEEEe---eeCCCCCCCCCCCHHHHHHHHHHHHccCCCcEEEE
Q 028983           73 ANFSFLQTLRLRSIIYLCPEP--YPEANTEFLKSNGIKLFQF---AIEGHKEPFVNIPEDMIREALKVLLDVRNHPVLIH  147 (201)
Q Consensus        73 ~~l~~L~~lGIktII~Lr~e~--~~~~~~~~~~~~gi~~~~i---pi~d~~~p~~~i~~~~i~~~l~~l~~~~~~pVLVH  147 (201)
                      +-++.|+.+|++.|-=+.|-.  ....+.+++++.|++...+   .+.+... .-.++.+.+.+++..+....-..|++=
T Consensus       110 A~~~AL~alg~~RIalvTPY~~~v~~~~~~~l~~~G~eV~~~~~~~~~~~~~-ia~i~p~~i~~~~~~~~~~~aDAifis  188 (239)
T TIGR02990       110 AAVDGLAALGVRRISLLTPYTPETSRPMAQYFAVRGFEIVNFTCLGLTDDRE-MARISPDCIVEAALAAFDPDADALFLS  188 (239)
T ss_pred             HHHHHHHHcCCCEEEEECCCcHHHHHHHHHHHHhCCcEEeeeeccCCCCCce-eeecCHHHHHHHHHHhcCCCCCEEEEe
Confidence            346889999999999998831  2235678899999998766   4433221 224567888888887755556779999


Q ss_pred             cCCCCChHHHHHHHHHHHCCCC
Q 028983          148 CKRGKHRTGCLVGCLRKLQKWC  169 (201)
Q Consensus       148 C~aG~~RTG~vva~~l~~~g~s  169 (201)
                      |+.  =||.-++.-+-...|.+
T Consensus       189 CTn--Lrt~~vi~~lE~~lGkP  208 (239)
T TIGR02990       189 CTA--LRAATCAQRIEQAIGKP  208 (239)
T ss_pred             CCC--chhHHHHHHHHHHHCCC
Confidence            986  37877777776666654

Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti and Silicibacter pomeroyi. It is missing from two other species with the other ectoine transport and utilization genes: Pseudomonas putida and Agrobacterium tumefaciens.

>PRK09875 putative hydrolase; Provisional

Probab=82.21  E-value=9.2  Score=33.45  Aligned_cols=38  Identities=16%  Similarity=0.246  Sum_probs=26.2

Q ss_pred             hhHHHHHhcCCcEEEEcCCCCCC---CchHHHHhhCCcEEE
Q 028983           73 ANFSFLQTLRLRSIIYLCPEPYP---EANTEFLKSNGIKLF  110 (201)
Q Consensus        73 ~~l~~L~~lGIktII~Lr~e~~~---~~~~~~~~~~gi~~~  110 (201)
                      .++..++++|.+|||+.++..+-   ....+.+++.|++.+
T Consensus        38 ~el~~~~~~Gg~tiVd~T~~g~GRd~~~l~~is~~tgv~Iv   78 (292)
T PRK09875         38 QEMNDLMTRGVRNVIEMTNRYMGRNAQFMLDVMRETGINVV   78 (292)
T ss_pred             HHHHHHHHhCCCeEEecCCCccCcCHHHHHHHHHHhCCcEE
Confidence            36777889999999999986332   234555666676654

>cd01528 RHOD_2 Member of the Rhodanese Homology Domain superfamily, subgroup 2

Probab=81.14  E-value=5  Score=28.49  Aligned_cols=41  Identities=20%  Similarity=0.195  Sum_probs=24.3

Q ss_pred             HHHHHHHHHHHc-cCCCcEEEEcCCCCChHHHHHHHHHHHCCCC
Q 028983          127 DMIREALKVLLD-VRNHPVLIHCKRGKHRTGCLVGCLRKLQKWC  169 (201)
Q Consensus       127 ~~i~~~l~~l~~-~~~~pVLVHC~aG~~RTG~vva~~l~~~g~s  169 (201)
                      ..+.+.++.+.. ..+.||+++|..|. |+...+. ++...|.+
T Consensus        43 ~~~~~~~~~~~~~~~~~~vv~~c~~g~-rs~~~~~-~l~~~G~~   84 (101)
T cd01528          43 SEIPERSKELDSDNPDKDIVVLCHHGG-RSMQVAQ-WLLRQGFE   84 (101)
T ss_pred             HHHHHHHHHhcccCCCCeEEEEeCCCc-hHHHHHH-HHHHcCCc
Confidence            344344444432 24789999999984 7755543 44446664

Subgroup 2 includes uncharacterized putative rhodanese-related domains.

>cd01531 Acr2p Eukaryotic arsenate resistance proteins are members of the Rhodanese Homology Domain superfamily

Probab=80.13  E-value=10  Score=27.57  Aligned_cols=23  Identities=17%  Similarity=0.352  Sum_probs=15.8

Q ss_pred             CCCcEEEEcCCCCChHHHHHHHH
Q 028983          140 RNHPVLIHCKRGKHRTGCLVGCL  162 (201)
Q Consensus       140 ~~~pVLVHC~aG~~RTG~vva~~  162 (201)
                      .+.+|+|||..+..|+...+..+
T Consensus        61 ~~~~iv~yC~~~~~r~~~aa~~l   83 (113)
T cd01531          61 KKDTVVFHCALSQVRGPSAARKF   83 (113)
T ss_pred             CCCeEEEEeecCCcchHHHHHHH
Confidence            46899999984445776655443

Included in this CD is the Saccharomyces cerevisiae arsenate reductase protein, Acr2p, and other yeast and plant homologs.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	201
1xri_A	151	X-ray Structure Of A Putative Phosphoprotein Phosph		4e-72

>pdb|1XRI|A Chain A, X-ray Structure Of A Putative Phosphoprotein Phosphatase From Arabidopsis Thaliana Gene At1g05000 Length = 151

Iteration: 1
 Score =  266 bits (681), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 126/146 (86%), Positives = 134/146 (91%)
Query: 51  LIPPLNFSMVDNGIFRSGFPDSANFSFLQTLRLRSIIYLCPEPYPEANTEFLKSNGIKLF 110
           LIPPLNFS VDNGIFRSGFPDSANFSFLQTL LRSIIYLCPEPYPE+N +FLKSNGI+LF
Sbjct: 2   LIPPLNFSXVDNGIFRSGFPDSANFSFLQTLGLRSIIYLCPEPYPESNLQFLKSNGIRLF 61
Query: 111 QFAIEGHKEPFVNIPEDMIREALKVLLDVRNHPVLIHCKRGKHRTGCLVGCLRKLQKWCL 170
           QF IEG+KEPFVNIP+  IR ALKVLLD +NHPVLIHCKRGKHRTGCLVGCLRKLQKWCL
Sbjct: 62  QFGIEGNKEPFVNIPDHKIRXALKVLLDEKNHPVLIHCKRGKHRTGCLVGCLRKLQKWCL 121
Query: 171 SSVFDEYQRFAAAKARVSDQRGTRIL 196
           +S+FDEYQRFAAAKARVSDQR   I 
Sbjct: 122 TSIFDEYQRFAAAKARVSDQRFXEIF 147

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	201
1xri_A	151	AT1G05000; structural genomics, protein structure	8e-60
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	7e-19
2img_A	151	Dual specificity protein phosphatase 23; DUSP23, V	3e-12
2f46_A	156	Hypothetical protein; structural genomics, joint c	5e-09
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-09
3rgo_A	157	Protein-tyrosine phosphatase mitochondrial 1; phos	8e-08
3s4o_A	167	Protein tyrosine phosphatase-like protein; structu	1e-07
2i6j_A	161	Ssoptp, sulfolobus solfataricus protein tyrosine p	1e-07
1ohe_A	348	CDC14B, CDC14B2 phosphatase; protein phosphatase,	3e-07
3rz2_A	189	Protein tyrosine phosphatase type IVA 1; tyrosine	6e-07
2c46_A	241	MRNA capping enzyme; phosphatase, transferase, hyd	1e-06
1yn9_A	169	BVP, polynucleotide 5'-phosphatase; RNA triphospha	2e-06
1rxd_A	159	Protein tyrosine phosphatase type IVA, member 1; p	2e-06
1fpz_A	212	Cyclin-dependent kinase inhibitor 3; alpha-beta sa	1e-04
2pq5_A	205	Dual specificity protein phosphatase 13; hydrolase	4e-04

>1xri_A AT1G05000; structural genomics, protein structure initiative, CESG for eukaryotic structural genomics, phosphoprote phosphatase; 3.30A {Arabidopsis thaliana} SCOP: c.45.1.1 PDB: 2q47_A Length = 151

 Score =  183 bits (465), Expect = 8e-60
 Identities = 126/141 (89%), Positives = 134/141 (95%)

Query: 51  LIPPLNFSMVDNGIFRSGFPDSANFSFLQTLRLRSIIYLCPEPYPEANTEFLKSNGIKLF 110
           LIPPLNFSMVDNGIFRSGFPDSANFSFLQTL LRSIIYLCPEPYPE+N +FLKSNGI+LF
Sbjct: 2   LIPPLNFSMVDNGIFRSGFPDSANFSFLQTLGLRSIIYLCPEPYPESNLQFLKSNGIRLF 61

Query: 111 QFAIEGHKEPFVNIPEDMIREALKVLLDVRNHPVLIHCKRGKHRTGCLVGCLRKLQKWCL 170
           QF IEG+KEPFVNIP+  IR ALKVLLD +NHPVLIHCKRGKHRTGCLVGCLRKLQKWCL
Sbjct: 62  QFGIEGNKEPFVNIPDHKIRMALKVLLDEKNHPVLIHCKRGKHRTGCLVGCLRKLQKWCL 121

Query: 171 SSVFDEYQRFAAAKARVSDQR 191
           +S+FDEYQRFAAAKARVSDQR
Sbjct: 122 TSIFDEYQRFAAAKARVSDQR 142

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A* Length = 157

 Score = 78.5 bits (193), Expect = 7e-19
 Identities = 18/116 (15%), Positives = 37/116 (31%), Gaps = 9/116 (7%)

Query: 56  NFSMVDNGIFRSGFPDSANFSFLQTLRLRSIIYLCPEPYPEANT---EFLKSNGIKLFQF 112
                   +  SG P+   FS L+   +  +I L P+   +A+    + +   G+     
Sbjct: 14  ALQQQAPQLLSSGLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQAGMDYVYI 73

Query: 113 AIEGHKEPFVNIPEDMIREALKVLLDVRNHPVLIHCKRGKHRTGCLVGCLRKLQKW 168
            ++       N   + +      +   +   VL+HC     R        +  Q  
Sbjct: 74  PVDWQ-----NPKVEDVEAFFAAMDQHKGKDVLVHCLANY-RASAFAYLYQLKQGQ 123

>2img_A Dual specificity protein phosphatase 23; DUSP23, VHZ, LDP-3, dual specicity protein phosphatase 23, DUS23_human, malate, structural genomics, PSI; 1.93A {Homo sapiens} Length = 151

 Score = 60.9 bits (148), Expect = 3e-12
 Identities = 29/114 (25%), Positives = 46/114 (40%), Gaps = 12/114 (10%)

Query: 52  IPPLNFSMVDNGIF-RSGFP-DSANFSFLQTLRLRSIIYLCPEPYPEANTEFLKSNGIKL 109
           + P NFS V  G       P   A++ FL  L +R ++ L     P +        G+ L
Sbjct: 4   VQPPNFSWVLPGRLAGLALPRLPAHYQFLLDLGVRHLVSLTERGPPHS----DSCPGLTL 59

Query: 110 FQFAIEGHKEPFVNIPEDMIREALKVLLDV--RNHPVLIHCKRGKHRTGCLVGC 161
            +  I     P      D I   ++++ +   R   V +HC  G  RTG ++ C
Sbjct: 60  HRLRIPDFCPP----APDQIDRFVQIVDEANARGEAVGVHCALGFGRTGTMLAC 109

>2f46_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.41A {Neisseria meningitidis Z2491} Length = 156

 Score = 52.3 bits (125), Expect = 5e-09
 Identities = 22/121 (18%), Positives = 45/121 (37%), Gaps = 12/121 (9%)

Query: 54  PLNFSMVDNGIFRSGFPDSANFSFLQTLRLRSIIYLCPE------PYPEANTEFLKSNGI 107
            +    +D  ++ S     A+   +  L +++II   P+      P      ++L+  G+
Sbjct: 14  KMAILKLDEHLYISPQLTKADAEQIAQLGIKTIICNRPDREEESQPDFAQIKQWLEQAGV 73

Query: 108 KLFQFAIEGHKEPFVNIPEDMIREALKVLLDVRNHPVLIHCKRGKHRTGCLVGCLRKLQK 167
             F       ++   +  E   +     L+    +PVL +C+ G  R   L G  R  + 
Sbjct: 74  TGFHHQPVTARDIQKHDVETFRQ-----LIGQAEYPVLAYCRTGT-RCSLLWGFRRAAEG 127

Query: 168 W 168
            
Sbjct: 128 M 128

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 54.1 bits (129), Expect = 5e-09
 Identities = 29/201 (14%), Positives = 58/201 (28%), Gaps = 67/201 (33%)

Query: 17  EEEEAEQMCRTIEVASVVDLSPQPAPVVTGDEVTLIPPLNFSMVDNGIFRSGFPD-SANF 75
             +E + +         +D  PQ  P     EV    P   S++              N+
Sbjct: 299 TPDEVKSLL-----LKYLDCRPQDLPR----EVLTTNPRRLSII--AESIRDGLATWDNW 347

Query: 76  SFLQTLRLRSIIYLCPEPYPEANTEFLKSNGIK-LFQ-FAIEGHKEPF---VNIPE---- 126
             +   +L +II        E++   L+    + +F   ++      F    +IP     
Sbjct: 348 KHVNCDKLTTII--------ESSLNVLEPAEYRKMFDRLSV------FPPSAHIPTILLS 393

Query: 127 ----DMIRE---------ALKVLLDVRNHPVL--IH-------CK----RGKHRTGCLVG 160
               D+I+              L++ +       I         K       HR+  +V 
Sbjct: 394 LIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRS--IVD 451

Query: 161 CLRKLQKWCLSSVF----DEY 177
                + +    +     D+Y
Sbjct: 452 HYNIPKTFDSDDLIPPYLDQY 472

>3rgo_A Protein-tyrosine phosphatase mitochondrial 1; phosphatidylglycerol phosphate (PGP) phosphatase, hydrolase; 1.93A {Mus musculus} PDB: 3rgq_A* Length = 157

 Score = 48.9 bits (117), Expect = 8e-08
 Identities = 17/130 (13%), Positives = 41/130 (31%), Gaps = 18/130 (13%)

Query: 57  FSMVDNGIFRSGFP-DSANFSFLQTLRLRSIIYLCPE---PYPEANTEFLKSNGIKLFQF 112
           +  +D+ +     P  +     +    +R +I +  E    +    ++  K  G++  + 
Sbjct: 2   YHRIDHTVLLGALPLKNMTRRLVLDENVRGVITMNEEYETRFLCNTSKEWKKAGVEQLRL 61

Query: 113 AIEGHKEPFVNIPE------DMIREALKVLLDVRNHPVLIHCKRGKHRTGCLVGC-LRKL 165
           +        V              +            V +HCK G+ R+  +V   L ++
Sbjct: 62  STVDM--TGVPTLANLHKGVQFALKYQA-----LGQCVYVHCKAGRSRSATMVAAYLIQV 114

Query: 166 QKWCLSSVFD 175
             W      +
Sbjct: 115 HNWSPEEAIE 124

>3s4o_A Protein tyrosine phosphatase-like protein; structural genomics, medical structural genomics of pathogen protozoa, MSGPP, unknown function; HET: MSE EPE; 2.30A {Leishmania major} Length = 167

 Score = 48.8 bits (116), Expect = 1e-07
 Identities = 18/104 (17%), Positives = 35/104 (33%), Gaps = 13/104 (12%)

Query: 66  RSGFPDSANFSFLQTLRLRSIIYLCPEPYPEANTEFLKSNGIKLFQFAIEGHKEP----- 120
            S  P       LQ   +R ++ +C   Y   +   +KS GI +  +  +    P     
Sbjct: 33  PSNLPTY--IKELQHRGVRHLVRVCGPTY---DATLVKSRGIDVHSWPFDDGAPPTRAVL 87

Query: 121 --FVNIPEDMIREALKVLLDVRNHPVLIHCKRGKHRTGCLVGCL 162
             ++ + +  +    +         + +HC  G  R   LV   
Sbjct: 88  DSWLKLLDTELARQQEDPSV-PPPTIGVHCVAGLGRAPILVALA 130

>2i6j_A Ssoptp, sulfolobus solfataricus protein tyrosine phosphatase; PTP domain, hydrolase; 1.66A {Sulfolobus solfataricus} PDB: 2i6i_A 2i6m_A 3ro1_A* 2i6o_A* 2dxp_A* 2i6p_A* Length = 161

 Score = 48.3 bits (115), Expect = 1e-07
 Identities = 20/110 (18%), Positives = 37/110 (33%), Gaps = 13/110 (11%)

Query: 60  VDNGIFRSGFPDSAN-FSFLQTLRLRSIIYLCPE-------PYPEANTEFLKSNGIKLFQ 111
               I  SG P + N     +   ++ ++ L  +          +     LK NG++   
Sbjct: 5   RRKTIGGSGLPYTENEILEWRKEGVKRVLVLPEDWEIEESWGDKDYYLSILKKNGLQPLH 64

Query: 112 FAIEGHKEPFVNIPEDMIREALKVLLDVRNHPVLIHCKRGKHRTGCLVGC 161
             I     P  +    +++  L           L+HC  G  RTG ++  
Sbjct: 65  IPIPDGGVPSDSQFLTIMKWLLS-----EKEGNLVHCVGGIGRTGTILAS 109

>1ohe_A CDC14B, CDC14B2 phosphatase; protein phosphatase, cell cycle, hydrolase; HET: SEP; 2.20A {Homo sapiens} SCOP: c.45.1.1 c.45.1.1 PDB: 1ohc_A 1ohd_A Length = 348

 Score = 48.5 bits (115), Expect = 3e-07
 Identities = 22/129 (17%), Positives = 41/129 (31%), Gaps = 14/129 (10%)

Query: 39  QPAPVVTGDEVTLIPPLNFSM---VDNGIFRSGFPDSANFSFLQTLR---LRSIIYLCPE 92
                  GD   +IP    +           SG+   +  +++Q  +   + +II L   
Sbjct: 169 HYEKAENGDLNWIIPDRFIAFCGPHSRARLESGYHQHSPETYIQYFKNHNVTTIIRLNKR 228

Query: 93  PYPEANTEFLKSNGIKLFQFAIEGHKEPFVNIPEDMIREALKVLLDVRNHPVLIHCKRGK 152
            Y     +     G             P   I ++ +      + +     + +H K G 
Sbjct: 229 MYD---AKRFTDAGFDHHDLFFADGSTPTDAIVKEFLD-----ICENAEGAIAVHSKAGL 280

Query: 153 HRTGCLVGC 161
            RTG L+ C
Sbjct: 281 GRTGTLIAC 289

>3rz2_A Protein tyrosine phosphatase type IVA 1; tyrosine phosphatase, dual specific phosphatase, COMP with peptide, hydrolase; 2.80A {Rattus norvegicus} PDB: 1x24_A 1zcl_A Length = 189

 Score = 47.0 bits (111), Expect = 6e-07
 Identities = 22/148 (14%), Positives = 46/148 (31%), Gaps = 8/148 (5%)

Query: 37  SPQPAPVVTGDEVTLIP-PLNFSMVDNGIFRSGFPDSANF-SFLQTLRL---RSIIYLCP 91
           S    P  +       P P+  +  +     +  P +A    F++ L+     +I+ +C 
Sbjct: 11  SSGLVPRGSHMARMNRPAPVEVTYKNMRFLITHNPTNATLNKFIEELKKYGVTTIVRVCE 70

Query: 92  EPYPEANTEFLKSNGIKLFQFAIEGHKEPFVNIPEDMIREALKVLLDVRNHPVLIHCKRG 151
             Y       ++  GI +  +  +    P   I +D +        +     + +HC  G
Sbjct: 71  ATYDT---TLVEKEGIHVLDWPFDDGAPPSNQIVDDWLSLVKIKFREEPGCCIAVHCVAG 127

Query: 152 KHRTGCLVGCLRKLQKWCLSSVFDEYQR 179
             R   LV                  ++
Sbjct: 128 LGRAPVLVALALIEGGMKYEDAVQFIRQ 155

>2c46_A MRNA capping enzyme; phosphatase, transferase, hydrolase, mRNA processing, multifunctional enzyme, nucleotidyltransferase; 1.6A {Homo sapiens} PDB: 1i9s_A 1i9t_A Length = 241

 Score = 46.3 bits (109), Expect = 1e-06
 Identities = 27/134 (20%), Positives = 51/134 (38%), Gaps = 8/134 (5%)

Query: 50  TLIPPLNFSMVDNGIFRSGFPDSANFSFLQTLRLRSIIYLCPE--PYPEANTEFLKSNGI 107
           T++ P   S V     R      +N+     +++  ++ L      Y   +   ++  GI
Sbjct: 51  TMLGPRYDSQVAEE-NRFHPSMLSNYLKSLKVKMGLLVDLTNTSRFY---DRNDIEKEGI 106

Query: 108 KLFQFAIEGHKE-PFVNIPEDMIREALKVLLDVRNHPVLIHCKRGKHRTGCLVGC-LRKL 165
           K  +   +GH E P     E  IR   +         + +HC  G +RTG L+   L + 
Sbjct: 107 KYIKLQCKGHGECPTTENTETFIRLCERFNERNPPELIGVHCTHGFNRTGFLICAFLVEK 166

Query: 166 QKWCLSSVFDEYQR 179
             W + +    + +
Sbjct: 167 MDWSIEAAVATFAQ 180

>1yn9_A BVP, polynucleotide 5'-phosphatase; RNA triphosphatase, cysteine phosphatase, P-loop, hydrolase; HET: PO4; 1.50A {Autographa californicanucleopolyhedrovirus} Length = 169

 Score = 45.3 bits (107), Expect = 2e-06
 Identities = 21/122 (17%), Positives = 41/122 (33%), Gaps = 13/122 (10%)

Query: 50  TLIPPLNF----SMVDNGIFRSGFPDSANFSFL----QTLRLRSIIYLCPE--PYPEANT 99
            +I   N     + +   +F     +   ++      Q   + +II L      Y   + 
Sbjct: 15  QVIKDSNLICFKTPLRPELFAYVTSEEDVWTAEQIVKQNPSIGAIIDLTNTSKYY---DG 71

Query: 100 EFLKSNGIKLFQFAIEGHKEPFVNIPEDMIREALKVLLDVRNHPVLIHCKRGKHRTGCLV 159
                 G+   +  + G   P  +I ++ I    +         V +HC  G +RTG +V
Sbjct: 72  VHFLRAGLLYKKIQVPGQTLPPESIVQEFIDTVKEFTEKCPGMLVGVHCTHGINRTGYMV 131

Query: 160 GC 161
             
Sbjct: 132 CR 133

>1rxd_A Protein tyrosine phosphatase type IVA, member 1; protein tyrosine phosphatase IVA1...; structural genomics, NYSGXRC, unknown function, PSI; 1.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1xm2_A 1zck_A 1r6h_A 1v3a_A Length = 159

 Score = 45.0 bits (106), Expect = 2e-06
 Identities = 19/115 (16%), Positives = 38/115 (33%), Gaps = 7/115 (6%)

Query: 69  FPDSANF-SFLQTLRL---RSIIYLCPEPYPEANTEFLKSNGIKLFQFAIEGHKEPFVNI 124
            P +A    F++ L+     +I+ +C   Y    T  ++  GI +  +  +    P   I
Sbjct: 23  NPTNATLNKFIEELKKYGVTTIVRVCEATYD---TTLVEKEGIHVLDWPFDDGAPPSNQI 79

Query: 125 PEDMIREALKVLLDVRNHPVLIHCKRGKHRTGCLVGCLRKLQKWCLSSVFDEYQR 179
            +D +        +     + +HC  G  R   LV                  ++
Sbjct: 80  VDDWLSLVKIKFREEPGCCIAVHCVAGLGRAPVLVALALIEGGMKYEDAVQFIRQ 134

>1fpz_A Cyclin-dependent kinase inhibitor 3; alpha-beta sandwich, hydrolase; 2.00A {Homo sapiens} SCOP: c.45.1.1 PDB: 1fq1_A* Length = 212

 Score = 40.1 bits (93), Expect = 1e-04
 Identities = 24/161 (14%), Positives = 45/161 (27%), Gaps = 27/161 (16%)

Query: 36  LSPQPAPVVTGDEVTLIP---PLNFSMVD-------NGIFRSGFP----------DSANF 75
            S Q +   + DE  +     P++ S +          +     P             + 
Sbjct: 5   SSIQTSEFDSSDEEPIEDEQTPIHISWLSLSRVNCSQFLGLCALPGCKFKDVRRNVQKDT 64

Query: 76  SFLQTLRLRSIIYLCPEPYPEANT-----EFLKSNGIKLFQFAIEGHKEPFVNIPEDMIR 130
             L++  ++ I   C              +  +  GI      I     P +    +++ 
Sbjct: 65  EELKSCGIQDIFVFCTRGELSKYRVPNLLDLYQQCGIITHHHPIADGGTPDIASCCEIME 124

Query: 131 EALKVLLDVRNHPVLIHCKRGKHRTGCLVGCLRKLQKWCLS 171
           E    L        LIH   G  R+  +  CL       +S
Sbjct: 125 ELTTCLK--NYRKTLIHSYGGLGRSCLVAACLLLYLSDTIS 163

>2pq5_A Dual specificity protein phosphatase 13; hydrolase, dual specificity phosphatase, DUSP13, testis and skeletal muscle specific DSP; 2.30A {Homo sapiens} PDB: 2gwo_A Length = 205

 Score = 38.9 bits (91), Expect = 4e-04
 Identities = 28/150 (18%), Positives = 54/150 (36%), Gaps = 18/150 (12%)

Query: 22  EQMCRTIEVASVVDLSPQPAPVVTGDEVTLIPPLNFSM-----VDNGIFRSGFPDSANFS 76
           +Q  R  ++   V  SP   P +   +  L      ++     V   +F      + + S
Sbjct: 6   KQDLRRPKIHGAVQASPYQPPTLASLQRLLWVRQAATLNHIDEVWPSLFLGDAYAARDKS 65

Query: 77  FLQTLRLRSIIYLCPEPYP-EANTEFLKSNGIKLFQFAIEGHKEPFVNIPE------DMI 129
            L  L +  ++      +  +   +F +   ++ +    + +  PF ++          I
Sbjct: 66  KLIQLGITHVVNAAAGKFQVDTGAKFYRGMSLEYYGIEADDN--PFFDLSVYFLPVARYI 123

Query: 130 REALKVLLDVRNHPVLIHCKRGKHRTGCLV 159
           R AL V        VL+HC  G  R+  LV
Sbjct: 124 RAALSV----PQGRVLVHCAMGVSRSATLV 149

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	201
1xri_A	151	AT1G05000; structural genomics, protein structure	100.0
4erc_A	150	Dual specificity protein phosphatase 23; alpha bet	99.95
3f81_A	183	Dual specificity protein phosphatase 3; hydrolase,	99.94
2img_A	151	Dual specificity protein phosphatase 23; DUSP23, V	99.94
3rgo_A	157	Protein-tyrosine phosphatase mitochondrial 1; phos	99.92
2e0t_A	151	Dual specificity phosphatase 26; conserved hypothe	99.92
2f46_A	156	Hypothetical protein; structural genomics, joint c	99.92
1zzw_A	149	Dual specificity protein phosphatase 10; MKP, PTP,	99.92
1yz4_A	160	DUSP15, dual specificity phosphatase-like 15 isofo	99.91
3s4e_A	144	Dual specificity protein phosphatase 19; PTP, prot	99.91
3ezz_A	144	Dual specificity protein phosphatase 4; alpha/beta	99.91
2oud_A	177	Dual specificity protein phosphatase 10; A central	99.91
2hcm_A	164	Dual specificity protein phosphatase; structural g	99.9
3emu_A	161	Leucine rich repeat and phosphatase domain contain	99.9
1wrm_A	165	Dual specificity phosphatase 22; DSP, JNK, hydrola	99.9
1fpz_A	212	Cyclin-dependent kinase inhibitor 3; alpha-beta sa	99.9
2i6j_A	161	Ssoptp, sulfolobus solfataricus protein tyrosine p	99.9
2hxp_A	155	Dual specificity protein phosphatase 9; human phos	99.9
2nt2_A	145	Protein phosphatase slingshot homolog 2; alpha/bet	99.9
2esb_A	188	Dual specificity protein phosphatase 18; alpha/bet	99.89
2pq5_A	205	Dual specificity protein phosphatase 13; hydrolase	99.89
2r0b_A	154	Serine/threonine/tyrosine-interacting protein; str	99.89
2y96_A	219	Dual specificity phosphatase DUPD1; hydrolase; 2.3	99.89
2wgp_A	190	Dual specificity protein phosphatase 14; MKP6, DUS	99.89
3s4o_A	167	Protein tyrosine phosphatase-like protein; structu	99.88
1ohe_A	348	CDC14B, CDC14B2 phosphatase; protein phosphatase,	99.88
2g6z_A	211	Dual specificity protein phosphatase 5; alpha/beta	99.87
1ywf_A	296	Phosphotyrosine protein phosphatase PTPB; four str	99.87
1rxd_A	159	Protein tyrosine phosphatase type IVA, member 1; p	99.87
3rz2_A	189	Protein tyrosine phosphatase type IVA 1; tyrosine	99.86
3cm3_A	176	Late protein H1, dual specificity protein phosphat	99.86
2q05_A	195	Late protein H1, dual specificity protein phosphat	99.86
3nme_A	294	Ptpkis1 protein, SEX4 glucan phosphatase; dual spe	99.85
1yn9_A	169	BVP, polynucleotide 5'-phosphatase; RNA triphospha	99.82
2j16_A	182	SDP-1, tyrosine-protein phosphatase YIL113W; hydro	99.78
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	99.77
2c46_A	241	MRNA capping enzyme; phosphatase, transferase, hyd	99.75
1d5r_A	324	Phosphoinositide phosphotase PTEN; C2 domain, phos	99.71
3n0a_A	361	Tyrosine-protein phosphatase auxilin; phosphatase-	99.56
3v0d_A	339	Voltage-sensor containing phosphatase; PTP, hydrol	99.55
3mmj_A	314	MYO-inositol hexaphosphate phosphohydrolase; phyta	99.41
3f41_A	629	Phytase; tandem repeat, protein tyrosine phosphata	99.21
3f41_A	629	Phytase; tandem repeat, protein tyrosine phosphata	99.18
1g4w_R	383	Protein tyrosine phosphatase SPTP; virulence facto	98.82
1fpr_A	284	Protein-tyrosine phosphatase 1C; protein tyrosine	98.78
3b7o_A	316	Tyrosine-protein phosphatase non-receptor type 11;	98.72
2b49_A	287	Protein tyrosine phosphatase, non-receptor type 3;	98.71
4az1_A	302	Tyrosine specific protein phosphatase; hydrolase,	98.7
1wch_A	315	Protein tyrosine phosphatase, non-receptor type 13	98.69
1p15_A	253	Protein-tyrosine phosphatase alpha; transmembrane,	98.68
3m4u_A	306	Tyrosine specific protein phosphatase, putative; p	98.68
1zc0_A	309	Tyrosine-protein phosphatase, non-receptor type 7;	98.67
1jln_A	297	STEP-like ptpase, protein tyrosine phosphatase, re	98.65
2hc1_A	291	Receptor-type tyrosine-protein phosphatase beta; p	98.64
4grz_A	288	Tyrosine-protein phosphatase non-receptor type 6;	98.64
2ooq_A	286	Receptor-type tyrosine-protein phosphatase T; prot	98.64
2p6x_A	309	Tyrosine-protein phosphatase non-receptor type 22;	98.63
1l8k_A	314	T-cell protein-tyrosine phosphatase; hydrolase; 2.	98.63
2cjz_A	305	Human protein tyrosine phosphatase PTPN5; protein	98.62
2oc3_A	303	Tyrosine-protein phosphatase non-receptor type 18;	98.61
2cm2_A	304	Tyrosine-protein phosphatase non-receptor type 1;	98.59
2i75_A	320	Tyrosine-protein phosphatase non-receptor type 4;	98.59
2bzl_A	325	Tyrosine-protein phosphatase, non-receptor type 14	98.58
1yfo_A	302	D1, receptor protein tyrosine phosphatase alpha; h	98.57
2i1y_A	301	Receptor-type tyrosine-protein phosphatase; recept	98.57
3s3e_A	307	Tyrosine-protein phosphatase 10D; differentiation,	98.54
2gjt_A	295	Receptor-type tyrosine-protein phosphatase PTPro;	98.52
2h4v_A	320	Receptor-type tyrosine-protein phosphatase gamma;	98.52
4i8n_A	354	Tyrosine-protein phosphatase non-receptor type 1;	98.5
3i36_A	342	Vascular protein tyrosine phosphatase 1; PTP, hydr	98.47
1ygr_A	610	CD45 protein tyrosine phosphatase; protein tyrosin	98.44
2b3o_A	532	Tyrosine-protein phosphatase, non-receptor type 6;	98.41
1lyv_A	306	Protein-tyrosine phosphatase YOPH; toxin, hydrolas	98.41
4ge6_A	314	Tyrosine-protein phosphatase non-receptor type 9;	98.4
2shp_A	525	SHP-2, SYP, SHPTP-2; tyrosine phosphatase, insulin	98.34
3ps5_A	595	Tyrosine-protein phosphatase non-receptor type 6;	98.32
2jjd_A	599	Receptor-type tyrosine-protein phosphatase epsilo;	98.31
1lar_A	575	Protein (LAR); tyrosine phosphatease, LAR protein,	98.31
1lar_A	575	Protein (LAR); tyrosine phosphatease, LAR protein,	98.28
2jjd_A	599	Receptor-type tyrosine-protein phosphatase epsilo;	98.27
1ygr_A	610	CD45 protein tyrosine phosphatase; protein tyrosin	98.26
2nlk_A	627	Protein tyrosine phosphatase, receptor type, G VA	98.23
2nlk_A	627	Protein tyrosine phosphatase, receptor type, G VA	98.06
1ohe_A	348	CDC14B, CDC14B2 phosphatase; protein phosphatase,	94.28
1vee_A	134	Proline-rich protein family; hypothetical protein,	94.26
1tq1_A	129	AT5G66040, senescence-associated family protein; C	93.64
2yf0_A	512	Myotubularin-related protein 6; hydrolase; 2.65A {	92.82
3d1p_A	139	Putative thiosulfate sulfurtransferase YOR285W; at	92.6
1zsq_A	528	Myotubularin-related protein 2; protein-phospholip	92.48
3i2v_A	127	Adenylyltransferase and sulfurtransferase MOCS3; r	92.28
2fsx_A	148	RV0390, COG0607: rhodanese-related sulfurtransfera	91.95
1lw3_A	657	Myotubularin-related protein 2; protein-phosphate	91.52
1urh_A	280	3-mercaptopyruvate sulfurtransferase; rhodanese; 2	90.42
2jtq_A	85	Phage shock protein E; solution structure rhodanes	90.13
1gmx_A	108	GLPE protein; transferase, rhodanese, sulfurtransf	86.66
3flh_A	124	Uncharacterized protein LP_1913; alpha-beta protei	85.44
3gk5_A	108	Uncharacterized rhodanese-related protein TVG08686	84.93
3iwh_A	103	Rhodanese-like domain protein; alpha-beta-alpha sa	84.1
3olh_A	302	MST, 3-mercaptopyruvate sulfurtransferase; structu	83.56
4f67_A	265	UPF0176 protein LPG2838; structural genomics, PSI-	83.28
3aay_A	277	Putative thiosulfate sulfurtransferase; sulfurtran	81.74
3g5j_A	134	Putative ATP/GTP binding protein; N-terminal domai	81.7
1e0c_A	271	Rhodanese, sulfurtransferase; sulfur metabolism, t	80.23
1rhs_A	296	Sulfur-substituted rhodanese; transferase, sulfurt	80.18

>1xri_A AT1G05000; structural genomics, protein structure initiative, CESG for eukaryotic structural genomics, phosphoprote phosphatase; 3.30A {Arabidopsis thaliana} SCOP: c.45.1.1 PDB: 2q47_A

Probab=100.00  E-value=5.8e-37  Score=238.47  Aligned_cols=150  Identities=85%  Similarity=1.385  Sum_probs=133.8

Q ss_pred             eeCCCCccccccceEecCCCChhhHHHHHhcCCcEEEEcCCCCCCCchHHHHhhCCcEEEEeeeCCCCCCCCCCCHHHHH
Q 028983           51 LIPPLNFSMVDNGIFRSGFPDSANFSFLQTLRLRSIIYLCPEPYPEANTEFLKSNGIKLFQFAIEGHKEPFVNIPEDMIR  130 (201)
Q Consensus        51 ~~pp~nf~~V~~~Lyrsg~p~~~~l~~L~~lGIktII~Lr~e~~~~~~~~~~~~~gi~~~~ipi~d~~~p~~~i~~~~i~  130 (201)
                      ++||.||.+|.++||||++|.+.++++|+++||++||||+++.......++++..|++|+++|+.|...|+..++.+.+.
T Consensus         2 ~~pp~n~~~v~~~l~~s~~~~~~d~~~L~~~gi~~Vi~l~~~~e~~~~~~~~~~~gi~~~~ipi~d~~~~~~~~~~~~~~   81 (151)
T 1xri_A            2 LIPPLNFSMVDNGIFRSGFPDSANFSFLQTLGLRSIIYLCPEPYPESNLQFLKSNGIRLFQFGIEGNKEPFVNIPDHKIR   81 (151)
T ss_dssp             BCCCTTCEEEETTEEEESCCCHHHHHHHHHHTCSEEEECCSSCCCHHHHHHHHHHTCEEEECCCCCCCGGGCCCCHHHHH
T ss_pred             ccCCcCcCeeCCCeEECCCcCccCHHHHHHCCCCEEEECCCCCcChhHHHHHHhcCCeEEecccccccCccccCCHHHHH
Confidence            78999999999999999999999999999999999999998854444456677789999999999976665566678898


Q ss_pred             HHHHHHHccCCCcEEEEcCCCCChHHHHHHHHHHHCCCCHHHHHHHHHHHhcCCCCchhhhhHhhhcccC
Q 028983          131 EALKVLLDVRNHPVLIHCKRGKHRTGCLVGCLRKLQKWCLSSVFDEYQRFAAAKARVSDQRGTRILSPAL  200 (201)
Q Consensus       131 ~~l~~l~~~~~~pVLVHC~aG~~RTG~vva~~l~~~g~s~~~ai~ey~~~~~~~~~~~~~~Fie~f~~~~  200 (201)
                      ++++.+.+..++||||||++|+||||+++|+||+.+||+.++|+++|+++++.+.+..+++|++.|++++
T Consensus        82 ~~~~~i~~~~~~~vlvHC~aG~~RTg~~~a~~l~~~g~~~~~a~~~~~~~~~~~~~~~~~qfi~~~~~~~  151 (151)
T 1xri_A           82 MALKVLLDEKNHPVLIHCKRGKHRTGCLVGCLRKLQKWCLTSIFDEYQRFAAAKARVSDQRFMEIFDVSS  151 (151)
T ss_dssp             HHHHHHHCGGGCSEEEECSSSSSHHHHHHHHHHHHTTBCHHHHHHHHHHHHGGGCCHHHHHHHHTCCCCC
T ss_pred             HHHHHHHcCCCCCEEEECCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHhcCCCccchHHHHHHHhcCCC
Confidence            8999988767899999999999999999999999999999999999999977667778999999999874

>4erc_A Dual specificity protein phosphatase 23; alpha beta, phosphatase(hydrolase), hydrolase; 1.15A {Homo sapiens} PDB: 2img_A

Probab=99.95  E-value=1.3e-27  Score=184.45  Aligned_cols=138  Identities=22%  Similarity=0.372  Sum_probs=114.3

Q ss_pred             eCCCCccccccc-eEecCCC-ChhhHHHHHhcCCcEEEEcCCCCCCCchHHHHhhCCcEEEEeeeCCCCCCCCCCCHHHH
Q 028983           52 IPPLNFSMVDNG-IFRSGFP-DSANFSFLQTLRLRSIIYLCPEPYPEANTEFLKSNGIKLFQFAIEGHKEPFVNIPEDMI  129 (201)
Q Consensus        52 ~pp~nf~~V~~~-Lyrsg~p-~~~~l~~L~~lGIktII~Lr~e~~~~~~~~~~~~~gi~~~~ipi~d~~~p~~~i~~~~i  129 (201)
                      .||.||.+|.++ ||+|++| .+.+++.|+++||++||||+.+....    .....|++|+++|+.|...|.    .+.+
T Consensus         3 ~pp~~~~~i~~~~l~~~~~p~~~~~~~~L~~~gi~~Vi~l~~~~~~~----~~~~~~~~~~~~~~~d~~~~~----~~~~   74 (150)
T 4erc_A            3 VQPPNFSWVLPGRLAGLALPRLPAHYQFLLDLGVRHLVSLTERGPPH----SDSCPGLTLHRLRIPDFCPPA----PDQI   74 (150)
T ss_dssp             CCCTTCEEEETTTEEEESCCCSHHHHHHHHHTTEEEEEECSSSCCTT----GGGCTTSEEEECCCCTTSCCC----HHHH
T ss_pred             CCCCCCEEeccCceeeecCCCCHHHHHHHHHCCCCEEEEcCCCCCCc----ccccCCceEEEEecCCCCCCC----HHHH
Confidence            589999999999 9999999 78899999999999999999873321    123369999999999987664    5677


Q ss_pred             HHHHHHHHc--cCCCcEEEEcCCCCChHHHHHHHHHHH-CCCCHHHHHHHHHHHhcCCC--CchhhhhHhhhcc
Q 028983          130 REALKVLLD--VRNHPVLIHCKRGKHRTGCLVGCLRKL-QKWCLSSVFDEYQRFAAAKA--RVSDQRGTRILSP  198 (201)
Q Consensus       130 ~~~l~~l~~--~~~~pVLVHC~aG~~RTG~vva~~l~~-~g~s~~~ai~ey~~~~~~~~--~~~~~~Fie~f~~  198 (201)
                      .++++++.+  ..++||||||.+|+||||+++++|++. .||+.++|++.++.. ++.+  ...+..|+..|.-
T Consensus        75 ~~~~~~i~~~~~~~~~vlVHC~~G~~Rsg~~~a~~l~~~~~~~~~~a~~~vr~~-R~~~~~~~~q~~~l~~~~~  147 (150)
T 4erc_A           75 DRFVQIVDEANARGEAVGVHCALGFGRTGTMLACYLVKERGLAAGDAIAEIRRL-RPGSIETYEQEKAVFQFYQ  147 (150)
T ss_dssp             HHHHHHHHHHHHTTCEEEEECSSSSHHHHHHHHHHHHHHHTCCHHHHHHHHHHH-STTCCCSHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHcCCCHHHHHHHHHHH-CCCCCCCHHHHHHHHHHHH
Confidence            777777765  468999999999999999999999885 799999999999877 5544  3467778777754

>3f81_A Dual specificity protein phosphatase 3; hydrolase, protein dual-specificity phosphatase, inhibitor; HET: STT; 1.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1vhr_A* 1j4x_A*

Probab=99.94  E-value=1e-26  Score=185.93  Aligned_cols=149  Identities=18%  Similarity=0.203  Sum_probs=116.4

Q ss_pred             CCCCeeeeCCCCccccccceEecCCCChhhHHHHHhcCCcEEEEcCCCCC---CCchHHHHhhCCcEEEEeeeCCCCCCC
Q 028983           45 TGDEVTLIPPLNFSMVDNGIFRSGFPDSANFSFLQTLRLRSIIYLCPEPY---PEANTEFLKSNGIKLFQFAIEGHKEPF  121 (201)
Q Consensus        45 ~~~~~~~~pp~nf~~V~~~Lyrsg~p~~~~l~~L~~lGIktII~Lr~e~~---~~~~~~~~~~~gi~~~~ipi~d~~~p~  121 (201)
                      .+++....|+.||.+|.|+||+|+++.+.+++.|+++||++||||+.+..   .....++++..|++|+++|+.|...+.
T Consensus        16 ~~~~~~~~p~~~~~~I~p~Lylg~~~~a~d~~~L~~~gI~~Vi~l~~~~~~~~~~~~~~~~~~~gi~~~~ip~~D~~~~~   95 (183)
T 3f81_A           16 DGSGCYSLPSQPCNEVTPRIYVGNASVAQDIPKLQKLGITHVLNAAEGRSFMHVNTNANFYKDSGITYLGIKANDTQEFN   95 (183)
T ss_dssp             CSSSCCCCCSSSEEEEETTEEEECHHHHTCHHHHHHHTCCEEEETTBSSSTTSBCCCTGGGTTTTCEEEECCCCCSTTSC
T ss_pred             cCCCcccCCCcCcceEeCCEEECCchhhhCHHHHHHCCCcEEEECCCCccccccccchhhcccCCCEEEEEEcCCCCccc
Confidence            35677789999999999999999999999999999999999999998632   122345666789999999999986653


Q ss_pred             CCCCHHHHHHHHHHHHccCCCcEEEEcCCCCChHHHHHHHHHH-HCCCCHHHHHHHHHHHhcCCCCchhhhhHhhh
Q 028983          122 VNIPEDMIREALKVLLDVRNHPVLIHCKRGKHRTGCLVGCLRK-LQKWCLSSVFDEYQRFAAAKARVSDQRGTRIL  196 (201)
Q Consensus       122 ~~i~~~~i~~~l~~l~~~~~~pVLVHC~aG~~RTG~vva~~l~-~~g~s~~~ai~ey~~~~~~~~~~~~~~Fie~f  196 (201)
                      .....+.+.++++......++||||||.+|++|||+++++|++ ..||+.++|++.++.. ++ . ..|.+|+++.
T Consensus        96 ~~~~~~~~~~~i~~~~~~~~~~VlVHC~~G~~RSg~~v~ayLm~~~~~~~~~A~~~v~~~-R~-i-~pn~~f~~qL  168 (183)
T 3f81_A           96 LSAYFERAADFIDQALAQKNGRVLVHCREGYSRSPTLVIAYLMMRQKMDVKSALSIVRQN-RE-I-GPNDGFLAQL  168 (183)
T ss_dssp             GGGGHHHHHHHHHHHHHSTTCCEEEECSSSSSHHHHHHHHHHHHHHCCCHHHHHHHHHHH-SC-C-CCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHcCCCeEEEECCCCcchHHHHHHHHHHHHhCCCHHHHHHHHHHc-CC-C-CCCHHHHHHH
Confidence            2111233344444444434899999999999999999999988 5799999999988875 65 5 3578777653

>2img_A Dual specificity protein phosphatase 23; DUSP23, VHZ, LDP-3, dual specicity protein phosphatase 23, DUS23_human, malate, structural genomics, PSI; 1.93A {Homo sapiens}

Probab=99.94  E-value=3.4e-26  Score=176.16  Aligned_cols=139  Identities=22%  Similarity=0.378  Sum_probs=114.4

Q ss_pred             eCCCCccccccc-eEecCCC-ChhhHHHHHhcCCcEEEEcCCC-CCCCchHHHHhhCCcEEEEeeeCCCCCCCCCCCHHH
Q 028983           52 IPPLNFSMVDNG-IFRSGFP-DSANFSFLQTLRLRSIIYLCPE-PYPEANTEFLKSNGIKLFQFAIEGHKEPFVNIPEDM  128 (201)
Q Consensus        52 ~pp~nf~~V~~~-Lyrsg~p-~~~~l~~L~~lGIktII~Lr~e-~~~~~~~~~~~~~gi~~~~ipi~d~~~p~~~i~~~~  128 (201)
                      .||.||.+|.++ ||+|+.| .+.+++.|+++||++||||+.+ +.+.   ..+  .++.|+++|+.|...|.    .+.
T Consensus         4 ~~p~~~~~I~~~~l~~~~~p~~~~~~~~l~~~gi~~Vv~l~~~~e~~~---~~~--~~~~~~~~~~~d~~~p~----~~~   74 (151)
T 2img_A            4 VQPPNFSWVLPGRLAGLALPRLPAHYQFLLDLGVRHLVSLTERGPPHS---DSC--PGLTLHRLRIPDFCPPA----PDQ   74 (151)
T ss_dssp             CCCTTCEEEETTTEEEESCCCSHHHHHHHHHTTEEEEEECSSSCCTTG---GGC--TTSEEEECCCCTTCCCC----HHH
T ss_pred             CCCCCcEEeecCceeeeCCCCcHHHHHHHHHCCCCEEEECCCCCCCCH---HHH--hhCCeEEEeCCCCCCCC----HHH
Confidence            589999999999 9999999 8889999999999999999987 3321   122  35779999999987774    566


Q ss_pred             HHHHHHHHHc--cCCCcEEEEcCCCCChHHHHHHHHHHHC-CCCHHHHHHHHHHHhcCCC--CchhhhhHhhhcccC
Q 028983          129 IREALKVLLD--VRNHPVLIHCKRGKHRTGCLVGCLRKLQ-KWCLSSVFDEYQRFAAAKA--RVSDQRGTRILSPAL  200 (201)
Q Consensus       129 i~~~l~~l~~--~~~~pVLVHC~aG~~RTG~vva~~l~~~-g~s~~~ai~ey~~~~~~~~--~~~~~~Fie~f~~~~  200 (201)
                      +.++++++.+  ..++||||||.+|+||||+++++|++.. ||+.++|++.++.. ++.+  ...+.+|+..|.-.|
T Consensus        75 ~~~~~~~i~~~~~~~~~vlVHC~aG~~Rsg~~~~~~l~~~~~~~~~~a~~~~r~~-R~~~~~~~~q~~~l~~~~~~L  150 (151)
T 2img_A           75 IDRFVQIVDEANARGEAVGVHCALGFGRTGTMLACYLVKERGLAAGDAIAEIRRL-RPGSIETYEQEKAVFQFYQRT  150 (151)
T ss_dssp             HHHHHHHHHHHHHTTCEEEEECSSSSSHHHHHHHHHHHHHHCCCHHHHHHHHHHH-STTCSCSHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHhCCCcEEEECCCCCChHHHHHHHHHHHHhCcCHHHHHHHHHHH-CCCCCCCHHHHHHHHHHHHHh
Confidence            7777777765  3689999999999999999999999976 99999999999877 5444  346778888886544

>3rgo_A Protein-tyrosine phosphatase mitochondrial 1; phosphatidylglycerol phosphate (PGP) phosphatase, hydrolase; 1.93A {Mus musculus} PDB: 3rgq_A*

Probab=99.92  E-value=1.4e-24  Score=168.49  Aligned_cols=136  Identities=14%  Similarity=0.259  Sum_probs=106.4

Q ss_pred             ccccccceEecCCCChhhHHHH-HhcCCcEEEEcCCCCCCC---chHHHHhhCCcEEEEeeeCCCC-CCCCCCCHHHHHH
Q 028983           57 FSMVDNGIFRSGFPDSANFSFL-QTLRLRSIIYLCPEPYPE---ANTEFLKSNGIKLFQFAIEGHK-EPFVNIPEDMIRE  131 (201)
Q Consensus        57 f~~V~~~Lyrsg~p~~~~l~~L-~~lGIktII~Lr~e~~~~---~~~~~~~~~gi~~~~ipi~d~~-~p~~~i~~~~i~~  131 (201)
                      |.+|.++||+|++|...+...+ +++||++||||+.+....   .....++..|++|+++|+.|.. .|.    .+.+.+
T Consensus         2 f~~I~~~l~~g~~~~~~~~~~ll~~~gi~~Vi~l~~~~e~~~~~~~~~~~~~~gi~~~~~p~~d~~~~~~----~~~~~~   77 (157)
T 3rgo_A            2 YHRIDHTVLLGALPLKNMTRRLVLDENVRGVITMNEEYETRFLCNTSKEWKKAGVEQLRLSTVDMTGVPT----LANLHK   77 (157)
T ss_dssp             EEECSSSEEEESCCCGGGHHHHHHHSCEEEEEEESCCTTTTTSSCCHHHHHHTTCEEEEECCCTTTSSCC----HHHHHH
T ss_pred             cccccCCeEEecCcCccchHHHHHHcCCCEEEECccccccccccCCHHHHHHCCCeEEEecCCCCCCCCh----HHHHHH
Confidence            6789999999999998877555 999999999999873211   1245667789999999999974 442    566777


Q ss_pred             HHHHHHc--cCCCcEEEEcCCCCChHHHHHHHHHHH-CCCCHHHHHHHHHHHhcCCCC--chhhhhHhhhc
Q 028983          132 ALKVLLD--VRNHPVLIHCKRGKHRTGCLVGCLRKL-QKWCLSSVFDEYQRFAAAKAR--VSDQRGTRILS  197 (201)
Q Consensus       132 ~l~~l~~--~~~~pVLVHC~aG~~RTG~vva~~l~~-~g~s~~~ai~ey~~~~~~~~~--~~~~~Fie~f~  197 (201)
                      +++++.+  ..++||||||.+|+||||+++++|++. .||+.++|++.++.. ++.+.  ..+.+|+..|.
T Consensus        78 ~~~~i~~~~~~~~~vlVHC~~G~~Rsg~~~~a~l~~~~~~~~~~a~~~v~~~-R~~~~~~~~~~~~L~~~~  147 (157)
T 3rgo_A           78 GVQFALKYQALGQCVYVHCKAGRSRSATMVAAYLIQVHNWSPEEAIEAIAKI-RSHISIRPSQLEVLKEFH  147 (157)
T ss_dssp             HHHHHHHHHHTTCEEEEESSSSSSHHHHHHHHHHHHHHTCCHHHHHHHHHHH-STTCCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCEEEEECCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHH-CCCCCCCHHHHHHHHHHH
Confidence            7777654  357899999999999999999999885 799999999988876 55443  35556666554

>2e0t_A Dual specificity phosphatase 26; conserved hypothetical protein, structural genomics, NPPSFA, project on protein structural and functional analyses; 1.67A {Homo sapiens}

Probab=99.92  E-value=4.6e-25  Score=171.09  Aligned_cols=133  Identities=14%  Similarity=0.183  Sum_probs=103.3

Q ss_pred             ccccccceEecCCCChhhHHHHHhcCCcEEEEcCCCCCCCchHHHHhhCCcEEEEeeeCCCCCCCCCCCHHHHHHHHHHH
Q 028983           57 FSMVDNGIFRSGFPDSANFSFLQTLRLRSIIYLCPEPYPEANTEFLKSNGIKLFQFAIEGHKEPFVNIPEDMIREALKVL  136 (201)
Q Consensus        57 f~~V~~~Lyrsg~p~~~~l~~L~~lGIktII~Lr~e~~~~~~~~~~~~~gi~~~~ipi~d~~~p~~~i~~~~i~~~l~~l  136 (201)
                      +..|.|+||+|+++.+.+++.|+++||++||||+.+... ...++++..|++|+++|+.|...+  ++ .+.+.++++++
T Consensus         2 ~~~I~~~ly~g~~~~~~d~~~L~~~gi~~Vi~l~~~~~~-~~~~~~~~~~i~~~~ip~~d~~~~--~l-~~~~~~~~~~i   77 (151)
T 2e0t_A            2 ADEVWPGLYLGDQDMANNRRELRRLGITHVLNASHSRWR-GTPEAYEGLGIRYLGVEAHDSPAF--DM-SIHFQTAADFI   77 (151)
T ss_dssp             EEEEETTEEEECHHHHTCHHHHHHHTCCEEEETTCCTTC-CSCTTHHHHTCEEEECCCCSSTTS--CT-HHHHHHHHHHH
T ss_pred             ccEEeCCeEECChhHhCCHHHHHHcCCCEEEEccCCccc-CCccccCCCCeEEEEEecccCCCc--cH-HHHHHHHHHHH
Confidence            568999999999999999999999999999999987431 122344556999999999986433  22 24455555555


Q ss_pred             Hc---cCCCcEEEEcCCCCChHHHHHHHHHH-HCCCCHHHHHHHHHHHhcCCCCchhhhhHhhh
Q 028983          137 LD---VRNHPVLIHCKRGKHRTGCLVGCLRK-LQKWCLSSVFDEYQRFAAAKARVSDQRGTRIL  196 (201)
Q Consensus       137 ~~---~~~~pVLVHC~aG~~RTG~vva~~l~-~~g~s~~~ai~ey~~~~~~~~~~~~~~Fie~f  196 (201)
                      ..   ..++||||||.+|++|||+++++|++ ..||+.++|++.++.. ++ . ..|.+|+++.
T Consensus        78 ~~~~~~~~~~vlVHC~aG~~RSg~~~~ayl~~~~~~~~~~a~~~v~~~-R~-i-~pn~~f~~qL  138 (151)
T 2e0t_A           78 HRALSQPGGKILVHCAVGVSRSATLVLAYLMLYHHLTLVEAIKKVKDH-RG-I-IPNRGFLRQL  138 (151)
T ss_dssp             HHHHHSTTCCEEEECSSSSHHHHHHHHHHHHHHSCCCHHHHHHHHHHT-SC-S-CCCHHHHHHH
T ss_pred             HHHHhcCCCcEEEECCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHc-CC-C-CCCHHHHHHH
Confidence            43   26899999999999999988888877 5799999999977755 55 4 3688887654

>2f46_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.41A {Neisseria meningitidis Z2491}

Probab=99.92  E-value=1.7e-24  Score=169.95  Aligned_cols=122  Identities=16%  Similarity=0.249  Sum_probs=101.3

Q ss_pred             eCCCCccccccceEecCCCChhhHHHHHhcCCcEEEEcCCC-CCC---C--chHHHHhhCCcE-EEEeeeCCCCCCCCCC
Q 028983           52 IPPLNFSMVDNGIFRSGFPDSANFSFLQTLRLRSIIYLCPE-PYP---E--ANTEFLKSNGIK-LFQFAIEGHKEPFVNI  124 (201)
Q Consensus        52 ~pp~nf~~V~~~Lyrsg~p~~~~l~~L~~lGIktII~Lr~e-~~~---~--~~~~~~~~~gi~-~~~ipi~d~~~p~~~i  124 (201)
                      ..|+||.+|.++||||+++++.+++.|+++||++|||||++ +..   .  .+.++++..||+ |+++|+.+. .+    
T Consensus        12 ~~~~n~~~v~~~l~rs~~~~~~d~~~L~~~Gi~~IIdlR~~~E~~~~p~~~~~~~~~~~~gi~~~~~iPv~~~-~~----   86 (156)
T 2f46_A           12 GNKMAILKLDEHLYISPQLTKADAEQIAQLGIKTIICNRPDREEESQPDFAQIKQWLEQAGVTGFHHQPVTAR-DI----   86 (156)
T ss_dssp             ---CCCEEEETTEEEESCCCGGGHHHHHHHTCCEEEECSCTTSSTTCCCHHHHHHHHGGGTCCEEEECCCCTT-TC----
T ss_pred             CCCcCceeccCCEEEcCCCCHHHHHHHHHCCCCEEEECCCCccccCCCcHHHHHHHHHHCCCHhheECccCCC-CC----
Confidence            45689999999999999999999999999999999999975 221   1  123467778999 999999875 33    


Q ss_pred             CHHHHHHHHHHHHccCCCcEEEEcCCCCChHHHHHHHHHHHCCCCHHHHHHHHHHH
Q 028983          125 PEDMIREALKVLLDVRNHPVLIHCKRGKHRTGCLVGCLRKLQKWCLSSVFDEYQRF  180 (201)
Q Consensus       125 ~~~~i~~~l~~l~~~~~~pVLVHC~aG~~RTG~vva~~l~~~g~s~~~ai~ey~~~  180 (201)
                      +.+.+.++++.+.+ .++||||||++|+ ||++++++|++.+||+.++|+++++..
T Consensus        87 ~~~~~~~~~~~l~~-~~~pVlvHC~sG~-Rs~~l~al~l~~~g~~~~~a~~~~~~~  140 (156)
T 2f46_A           87 QKHDVETFRQLIGQ-AEYPVLAYCRTGT-RCSLLWGFRRAAEGMPVDEIIRRAQAA  140 (156)
T ss_dssp             CHHHHHHHHHHHHT-SCSSEEEECSSSH-HHHHHHHHHHHHTTCCHHHHHHHHHHT
T ss_pred             CHHHHHHHHHHHHh-CCCCEEEECCCCC-CHHHHHHHHHHHcCCCHHHHHHHHHHc
Confidence            36778877777654 6899999999999 999999999999999999999999865

>1zzw_A Dual specificity protein phosphatase 10; MKP, PTP, hydrolase; 1.60A {Homo sapiens}

Probab=99.92  E-value=3.8e-24  Score=165.74  Aligned_cols=131  Identities=11%  Similarity=0.164  Sum_probs=102.6

Q ss_pred             CccccccceEecCCCChhhHHHHHhcCCcEEEEcCCCCCCCchHHHHhhCCcEEEEeeeCCCCCCCCCCCHHHHHHHHHH
Q 028983           56 NFSMVDNGIFRSGFPDSANFSFLQTLRLRSIIYLCPEPYPEANTEFLKSNGIKLFQFAIEGHKEPFVNIPEDMIREALKV  135 (201)
Q Consensus        56 nf~~V~~~Lyrsg~p~~~~l~~L~~lGIktII~Lr~e~~~~~~~~~~~~~gi~~~~ipi~d~~~p~~~i~~~~i~~~l~~  135 (201)
                      .+.+|.|+||+|+++.+.+++.|+++||++||||+.+. +..   .....|++|+++|+.|...+.  + .+.+.+++++
T Consensus         3 ~~~~I~~~ly~g~~~~~~d~~~L~~~gi~~Vi~l~~e~-p~~---~~~~~~~~~~~ipi~D~~~~~--~-~~~~~~~~~~   75 (149)
T 1zzw_A            3 ELTPILPFLFLGNEQDAQDLDTMQRLNIGYVINVTTHL-PLY---HYEKGLFNYKRLPATDSNKQN--L-RQYFEEAFEF   75 (149)
T ss_dssp             CCEEEETTEEEECTTGGGCHHHHHHTTEEEEEECCSSS-CCT---TGGGTCSEEEECCCCCSSSCC--C-HHHHHHHHHH
T ss_pred             CceEeeCCeEECChhHhhCHHHHHHCCCcEEEEecCCC-CCc---ccCCCCeEEEEEECCCCCccc--H-HHHHHHHHHH
Confidence            46789999999999999999999999999999999862 211   234579999999999875442  2 3445555555


Q ss_pred             HHc--cCCCcEEEEcCCCCChHHHHHHHHHH-HCCCCHHHHHHHHHHHhcCCCCchhhhhHhh
Q 028983          136 LLD--VRNHPVLIHCKRGKHRTGCLVGCLRK-LQKWCLSSVFDEYQRFAAAKARVSDQRGTRI  195 (201)
Q Consensus       136 l~~--~~~~pVLVHC~aG~~RTG~vva~~l~-~~g~s~~~ai~ey~~~~~~~~~~~~~~Fie~  195 (201)
                      +..  ..++||||||.+|++|||+++++|++ ..||+.++|++.++.. ++.+. .|.+|+++
T Consensus        76 i~~~~~~~~~VlVHC~~G~~RSg~~~~ayl~~~~~~~~~~a~~~v~~~-R~~~~-pn~~f~~q  136 (149)
T 1zzw_A           76 IEEAHQCGKGLLIHCQAGVSRSATIVIAYLMKHTRMTMTDAYKFVKGK-RPIIS-PNLNFMGQ  136 (149)
T ss_dssp             HHHHHHTTCEEEEECSSSSSHHHHHHHHHHHHHSCCCHHHHHHHHHHH-CTTCC-CCHHHHHH
T ss_pred             HHHHHHcCCeEEEECCCCCCHHHHHHHHHHHHHcCCCHHHHHHHHHHH-CCccC-CCHHHHHH
Confidence            543  26899999999999999999999988 4799999999977755 66554 46666654

>1yz4_A DUSP15, dual specificity phosphatase-like 15 isoform A; hydrolase; HET: BOG; 2.40A {Homo sapiens}

Probab=99.91  E-value=8.2e-24  Score=166.01  Aligned_cols=131  Identities=16%  Similarity=0.229  Sum_probs=102.4

Q ss_pred             CCCccccccceEecCCCChhhHHHHHhcCCcEEEEcCCCCCCCchHHHHhhCCcEEEEeeeCCCCCCCCCCCHHHHHHHH
Q 028983           54 PLNFSMVDNGIFRSGFPDSANFSFLQTLRLRSIIYLCPEPYPEANTEFLKSNGIKLFQFAIEGHKEPFVNIPEDMIREAL  133 (201)
Q Consensus        54 p~nf~~V~~~Lyrsg~p~~~~l~~L~~lGIktII~Lr~e~~~~~~~~~~~~~gi~~~~ipi~d~~~p~~~i~~~~i~~~l  133 (201)
                      +.++.+|.|+||+|+++.+.+++.|+++||++||||+.++.+  .     ..|++|+++|+.|...+.  + .+.+.+++
T Consensus         5 ~~~~~~I~~~lylg~~~~~~d~~~L~~~gI~~Vi~l~~~~~~--~-----~~~i~~~~ipi~D~~~~~--~-~~~~~~~~   74 (160)
T 1yz4_A            5 GNGMTKVLPGLYLGNFIDAKDLDQLGRNKITHIISIHESPQP--L-----LQDITYLRIPVADTPEVP--I-KKHFKECI   74 (160)
T ss_dssp             CSSSEEEETTEEEECTTGGGCHHHHHHTTCCEEEEECSSCCC--C-----CTTCEEEEECCCSCTTSC--G-GGGHHHHH
T ss_pred             CCCceEEECCEEECChhhhcCHHHHHHCCCeEEEEccCCCCC--c-----cCCCeEEEEECCCCCCcc--H-HHHHHHHH
Confidence            567999999999999999999999999999999999987432  1     258999999999876543  2 12333344


Q ss_pred             HHHHc--cCCCcEEEEcCCCCChHHHHHHHHHH-HCCCCHHHHHHHHHHHhcCCCCchhhhhHhhh
Q 028983          134 KVLLD--VRNHPVLIHCKRGKHRTGCLVGCLRK-LQKWCLSSVFDEYQRFAAAKARVSDQRGTRIL  196 (201)
Q Consensus       134 ~~l~~--~~~~pVLVHC~aG~~RTG~vva~~l~-~~g~s~~~ai~ey~~~~~~~~~~~~~~Fie~f  196 (201)
                      +++..  ..++||||||.+|++|||+++++|++ ..||+.++|++.++.. ++.+. .|.+|++++
T Consensus        75 ~~i~~~~~~~~~VlVHC~aG~~RSg~~~~aylm~~~~~~~~~a~~~v~~~-R~~~~-pn~~f~~qL  138 (160)
T 1yz4_A           75 NFIHCCRLNGGNCLVHSFAGISRSTTIVTAYVMTVTGLGWRDVLEAIKAT-RPIAN-PNPGFRQQL  138 (160)
T ss_dssp             HHHHHHHHTTCCEEEEETTSSSHHHHHHHHHHHHHHCCCHHHHHHHHHHT-CTTCC-CCHHHHHHH
T ss_pred             HHHHHHHHcCCeEEEECCCCCchHHHHHHHHHHHHcCCCHHHHHHHHHHH-CCCcC-CCHHHHHHH
Confidence            44432  26899999999999999999998887 5699999999877754 66554 477777654

>3s4e_A Dual specificity protein phosphatase 19; PTP, protein tyrosine phosphatase, hydrolase; 1.26A {Homo sapiens}

Probab=99.91  E-value=8.7e-24  Score=163.17  Aligned_cols=131  Identities=12%  Similarity=0.112  Sum_probs=103.3

Q ss_pred             CCccccccceEecCCCChhhHHHHHhcCCcEEEEcCCCCCCCchHHHHhhCCcEEEEeeeCCCCCCCCCCCHHHHHHHHH
Q 028983           55 LNFSMVDNGIFRSGFPDSANFSFLQTLRLRSIIYLCPEPYPEANTEFLKSNGIKLFQFAIEGHKEPFVNIPEDMIREALK  134 (201)
Q Consensus        55 ~nf~~V~~~Lyrsg~p~~~~l~~L~~lGIktII~Lr~e~~~~~~~~~~~~~gi~~~~ipi~d~~~p~~~i~~~~i~~~l~  134 (201)
                      .++..|.|+||+|+.+.+.+++.|+++||++||||+.+... ..     ..|++|+++|+.|...+.  + .+.+.++++
T Consensus         2 ~~~~~I~~~LylG~~~~a~~~~~L~~~gI~~Vl~l~~~~~~-~~-----~~~~~~~~ipi~D~~~~~--~-~~~~~~~~~   72 (144)
T 3s4e_A            2 SQVGVIKPWLLLGSQDAAHDLDTLKKNKVTHILNVAYGVEN-AF-----LSDFTYKSISILDLPETN--I-LSYFPECFE   72 (144)
T ss_dssp             CCCEEEETTEEEECHHHHTCHHHHHHTTCCEEEECSSSCCC-CC-----TTTSEEEECCCCCCTTSC--G-GGGHHHHHH
T ss_pred             CchhEEcCCEEECChhHhCCHHHHHHcCCCEEEEccCCCCC-CC-----CCCCEEEEEeccCCCCCc--h-HHHHHHHHH
Confidence            45788999999999999999999999999999999976321 11     248999999999875542  2 234455555


Q ss_pred             HHHc--cCCCcEEEEcCCCCChHHHHHHHHHHH-CCCCHHHHHHHHHHHhcCCCCchhhhhHhhh
Q 028983          135 VLLD--VRNHPVLIHCKRGKHRTGCLVGCLRKL-QKWCLSSVFDEYQRFAAAKARVSDQRGTRIL  196 (201)
Q Consensus       135 ~l~~--~~~~pVLVHC~aG~~RTG~vva~~l~~-~g~s~~~ai~ey~~~~~~~~~~~~~~Fie~f  196 (201)
                      +|.+  ..+++|||||.+|++|||+++++|++. .||+.++|++.++.. ++.+. .|.+|+++.
T Consensus        73 fi~~~~~~~~~VlVHC~~G~sRS~~~v~ayLm~~~~~~~~~A~~~v~~~-Rp~~~-pn~~f~~qL  135 (144)
T 3s4e_A           73 FIEEAKRKDGVVLVHSNAGVSRAAAIVIGFLMNSEQTSFTSAFSLVKNA-RPSIC-PNSGFMEQL  135 (144)
T ss_dssp             HHHHHHHTTCCEEEECSSSSSHHHHHHHHHHHHHHCCCHHHHHHHHHHH-STTCC-CCHHHHHHH
T ss_pred             HHHHHHHcCCeEEEEcCCCCchHHHHHHHHHHHHcCCCHHHHHHHHHHH-CCCcC-CCHHHHHHH
Confidence            5533  368899999999999999999999995 799999999977765 66564 577887654

>3ezz_A Dual specificity protein phosphatase 4; alpha/beta, hydrolase, nucleus; 2.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1m3g_A

Probab=99.91  E-value=7.1e-24  Score=163.32  Aligned_cols=131  Identities=10%  Similarity=0.032  Sum_probs=101.1

Q ss_pred             ccccccceEecCCCChhhHHHHHhcCCcEEEEcCCCCCCCchHHHHhhCCcEEEEeeeCCCCCCCCCCCHHHHHHHHHHH
Q 028983           57 FSMVDNGIFRSGFPDSANFSFLQTLRLRSIIYLCPEPYPEANTEFLKSNGIKLFQFAIEGHKEPFVNIPEDMIREALKVL  136 (201)
Q Consensus        57 f~~V~~~Lyrsg~p~~~~l~~L~~lGIktII~Lr~e~~~~~~~~~~~~~gi~~~~ipi~d~~~p~~~i~~~~i~~~l~~l  136 (201)
                      ...|.|+||+|+++...+.+.|+++||++||||+.+... ..     ..|++|+++|+.|...+...-..+.+.++++..
T Consensus         4 p~~I~~~lylg~~~~a~~~~~L~~~gI~~Vi~l~~~~~~-~~-----~~~~~~~~ip~~D~~~~~~~~~~~~~~~~i~~~   77 (144)
T 3ezz_A            4 PVEILPFLYLGSAYHAARRDMLDALGITALLNVSSDCPN-HF-----EGHYQYKCIPVEDNHKADISSWFMEAIEYIDAV   77 (144)
T ss_dssp             CEEEETTEEEEEHHHHTCHHHHHHTTCCEEEECSSSCCC-TT-----TTTSEEEECCCCSSSSCCTTTTHHHHHHHHHHH
T ss_pred             cceeeCCEEECChhhcCCHHHHHHCCCeEEEEccCCCCc-cC-----CCCceEEEEEcccCCCCChHHHHHHHHHHHHHH
Confidence            357889999999999999999999999999999986322 11     248999999999976653222233333344443


Q ss_pred             HccCCCcEEEEcCCCCChHHHHHHHHHHH-CCCCHHHHHHHHHHHhcCCCCchhhhhHhhh
Q 028983          137 LDVRNHPVLIHCKRGKHRTGCLVGCLRKL-QKWCLSSVFDEYQRFAAAKARVSDQRGTRIL  196 (201)
Q Consensus       137 ~~~~~~pVLVHC~aG~~RTG~vva~~l~~-~g~s~~~ai~ey~~~~~~~~~~~~~~Fie~f  196 (201)
                      . ..+++|||||.+|++|||+++++|++. .||+.++|++.++.. ++.+. .|.+|+++.
T Consensus        78 ~-~~~~~VlVHC~~G~~RS~~~~~aylm~~~~~~~~~A~~~v~~~-Rp~~~-pn~~f~~qL  135 (144)
T 3ezz_A           78 K-DCRGRVLVHSQAGISRSATICLAYLMMKKRVRLEEAFEFVKQR-RSIIS-PNFSFMGQL  135 (144)
T ss_dssp             H-HTTCCEEEEESSSSSHHHHHHHHHHHHHHTCCHHHHHHHHHTT-CTTCC-CCHHHHHHH
T ss_pred             H-hcCCeEEEECCCCCChhHHHHHHHHHHHcCCCHHHHHHHHHHH-CCccC-CCHhHHHHH
Confidence            3 367999999999999999999999985 799999999977755 66554 578887653

>2oud_A Dual specificity protein phosphatase 10; A central five-stranded B-sheet, hydrolase; 2.80A {Homo sapiens}

Probab=99.91  E-value=2e-23  Score=166.92  Aligned_cols=135  Identities=12%  Similarity=0.162  Sum_probs=105.4

Q ss_pred             eCCCCccccccceEecCCCChhhHHHHHhcCCcEEEEcCCCCCCCchHHHHhhCCcEEEEeeeCCCCCCCCCCCHHHHHH
Q 028983           52 IPPLNFSMVDNGIFRSGFPDSANFSFLQTLRLRSIIYLCPEPYPEANTEFLKSNGIKLFQFAIEGHKEPFVNIPEDMIRE  131 (201)
Q Consensus        52 ~pp~nf~~V~~~Lyrsg~p~~~~l~~L~~lGIktII~Lr~e~~~~~~~~~~~~~gi~~~~ipi~d~~~p~~~i~~~~i~~  131 (201)
                      +...++.+|.|+||+|+++...+++.|+++||++||||+.+. +..   +....|++|+++|+.|...+.  + .+.+.+
T Consensus         3 ~~~~~~~~I~p~LylG~~~~a~d~~~L~~~gI~~Vi~l~~e~-p~~---~~~~~~i~~~~ipi~D~~~~~--l-~~~~~~   75 (177)
T 2oud_A            3 IENAELTPILPFLFLGNEQDAQDLDTMQRLNIGYVINVTTHL-PLY---HYEKGLFNYKRLPATDSNKQN--L-RQYFEE   75 (177)
T ss_dssp             TCSCCCEEEETTEEEECTTTTTCHHHHHHTTEEEEEECCSSS-CCT---TTTTTCSEEEECCCCCCSSCC--C-HHHHHH
T ss_pred             CCCCCCeEEECCEEEcChhhhcCHHHHHHCCCcEEEEecCCC-Ccc---cccCCCceEEEEECCCCCccc--H-HHHHHH
Confidence            345678999999999999999999999999999999999862 211   234579999999999865442  2 345555


Q ss_pred             HHHHHHc--cCCCcEEEEcCCCCChHHHHHHHHHHH-CCCCHHHHHHHHHHHhcCCCCchhhhhHhh
Q 028983          132 ALKVLLD--VRNHPVLIHCKRGKHRTGCLVGCLRKL-QKWCLSSVFDEYQRFAAAKARVSDQRGTRI  195 (201)
Q Consensus       132 ~l~~l~~--~~~~pVLVHC~aG~~RTG~vva~~l~~-~g~s~~~ai~ey~~~~~~~~~~~~~~Fie~  195 (201)
                      +++++..  ..++||||||.+|++|||+++++|++. .||+.++|++.++.. ++.+. .|.+|+++
T Consensus        76 ~~~~i~~~~~~~~~VlVHC~aG~~RSg~~v~ayLm~~~~~~~~~A~~~v~~~-Rp~~~-pn~~f~~q  140 (177)
T 2oud_A           76 AFEFIEEAHQCGKGLLIHCQAGVSRSATIVIAYLMKHTRMTMTDAYKFVKGK-RPIIS-PNLNFMGQ  140 (177)
T ss_dssp             HHHHHHHHHHTTCEEEEECSSSSSHHHHHHHHHHHHTSCCCHHHHHHHHHHH-CTTCC-CCHHHHHH
T ss_pred             HHHHHHHHHhcCCcEEEEcCCCCCchHHHHHHHHHHHcCCCHHHHHHHHHHH-CCCcC-CCHHHHHH
Confidence            6666543  368999999999999999999999985 699999999877655 66554 46666554

>2hcm_A Dual specificity protein phosphatase; structural genomics, PSI, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Mus musculus}

Probab=99.90  E-value=2.1e-23  Score=164.25  Aligned_cols=131  Identities=11%  Similarity=0.134  Sum_probs=103.3

Q ss_pred             CCCccccccceEecCCCChhhHHHHHhcCCcEEEEcCCCCCCCchHHHHhhCCcEEEEeeeCCCCCCCCCCCHHHHHHHH
Q 028983           54 PLNFSMVDNGIFRSGFPDSANFSFLQTLRLRSIIYLCPEPYPEANTEFLKSNGIKLFQFAIEGHKEPFVNIPEDMIREAL  133 (201)
Q Consensus        54 p~nf~~V~~~Lyrsg~p~~~~l~~L~~lGIktII~Lr~e~~~~~~~~~~~~~gi~~~~ipi~d~~~p~~~i~~~~i~~~l  133 (201)
                      ..++.+|.++||.|+++...+++.|+++||++||||+.+....      ...|++|+++|+.|...+.  + .+.+.+++
T Consensus         9 ~~~~~~I~~~l~lg~~~~~~d~~~L~~~gI~~Vi~l~~~~~~~------~~~~~~~~~ip~~D~~~~~--~-~~~~~~~~   79 (164)
T 2hcm_A            9 PPPFARVAPALFIGNARAAGATELLVRAGITLCVNVSRQQPGP------RAPGVAELRVPVFDDPAED--L-LTHLEPTC   79 (164)
T ss_dssp             CCSEEEEETTEEEEEGGGGGCHHHHHHTTEEEEEECSSSCCCC------CCTTCEEEECCCCSCTTSC--C-HHHHHHHH
T ss_pred             CCCCeEEeCCEEECChhhhcCHHHHHHCCCeEEEEcCCCCCCC------CCCCCEEEEEeCcCCCCch--H-HHHHHHHH
Confidence            5789999999999999999999999999999999999874321      1258999999998865432  2 34555555


Q ss_pred             HHHHc--cCCCcEEEEcCCCCChHHHHHHHHHH-HCCCCHHHHHHHHHHHhcCCCCchhhhhHhh
Q 028983          134 KVLLD--VRNHPVLIHCKRGKHRTGCLVGCLRK-LQKWCLSSVFDEYQRFAAAKARVSDQRGTRI  195 (201)
Q Consensus       134 ~~l~~--~~~~pVLVHC~aG~~RTG~vva~~l~-~~g~s~~~ai~ey~~~~~~~~~~~~~~Fie~  195 (201)
                      +++..  ..++||||||.+|++|||+++++|++ ..||+.++|++.++.. ++.+. .|.+|+++
T Consensus        80 ~~i~~~~~~~~~VlVHC~aG~~RSg~~~~ayLm~~~~~~~~~A~~~v~~~-R~~~~-pn~~f~~q  142 (164)
T 2hcm_A           80 AAMEAAVRDGGSCLVYCKNGRSRSAAVCTAYLMRHRGHSLDRAFQMVKSA-RPVAE-PNLGFWAQ  142 (164)
T ss_dssp             HHHHHHHHTTCEEEEEESSSSHHHHHHHHHHHHHHSCCCHHHHHHHHHHH-CTTCC-CCHHHHHH
T ss_pred             HHHHHHHHcCCEEEEECCCCCchHHHHHHHHHHHHhCCCHHHHHHHHHHH-CCCcC-CCHHHHHH
Confidence            55543  36899999999999999999988888 5799999999877755 66553 46666554

>3emu_A Leucine rich repeat and phosphatase domain containing protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.30A {Entamoeba histolytica}

Probab=99.90  E-value=1.3e-23  Score=165.96  Aligned_cols=134  Identities=17%  Similarity=0.233  Sum_probs=105.6

Q ss_pred             eCCCCccccccceEecCCCChhhHHHHHhcCCcEEEEcCCCCCCCchHHHHhhCCcEEEEeeeCCCCCCCCCCCHHHHHH
Q 028983           52 IPPLNFSMVDNGIFRSGFPDSANFSFLQTLRLRSIIYLCPEPYPEANTEFLKSNGIKLFQFAIEGHKEPFVNIPEDMIRE  131 (201)
Q Consensus        52 ~pp~nf~~V~~~Lyrsg~p~~~~l~~L~~lGIktII~Lr~e~~~~~~~~~~~~~gi~~~~ipi~d~~~p~~~i~~~~i~~  131 (201)
                      .|..++..|.|+||.|+++.+.+.+.|+++||++|||++.+.. ..    + ..|++|+++|+.|...+.  + .+.+.+
T Consensus         5 ~p~~~~~~I~~~LylG~~~~a~~~~~L~~~gIt~Vlnl~~~~~-~~----~-~~~~~~~~ipi~D~~~~~--l-~~~~~~   75 (161)
T 3emu_A            5 FPTLSPTQIIQYIHLGSFLNAHNVDYIHNNNISSILLVGIEVP-SL----F-KDQCDILRLDIVSEEGHQ--L-YDSIPN   75 (161)
T ss_dssp             CGGGSCEEEETTEEEEETTGGGCHHHHHHTTEEEEEEEC-------------CTTSEEEEECCCCSSTTH--H-HHHHHH
T ss_pred             CCCCCceEEECCEEECChHHhhCHHHHHHCCCCEEEEeCCCCc-cc----c-CCCCEEEEEeCcCCCCCc--H-HHHHHH
Confidence            4557899999999999999999999999999999999998632 11    1 248999999999864431  1 345667


Q ss_pred             HHHHHHc--cCCCcEEEEcCCCCChHHHHHHHHHH-HCCCCHHHHHHHHHHHhcCCCCchhhhhHhhh
Q 028983          132 ALKVLLD--VRNHPVLIHCKRGKHRTGCLVGCLRK-LQKWCLSSVFDEYQRFAAAKARVSDQRGTRIL  196 (201)
Q Consensus       132 ~l~~l~~--~~~~pVLVHC~aG~~RTG~vva~~l~-~~g~s~~~ai~ey~~~~~~~~~~~~~~Fie~f  196 (201)
                      ++++|.+  ..+++|||||.+|++|||+++++|+| ..||+.++|++.++.. ++.+. .|.+|+++.
T Consensus        76 ~~~fI~~~~~~~~~VlVHC~~G~sRS~~vv~ayLm~~~~~s~~~A~~~v~~~-Rp~i~-pn~~f~~qL  141 (161)
T 3emu_A           76 AIKFIIRSIQRKEGVLIISGTGVNKAPAIVIAFLMYYQRLSFINAFNKVQGL-YPLID-IESGFILQL  141 (161)
T ss_dssp             HHHHHHHHHHTTCEEEEEESSSSSHHHHHHHHHHHHHTTCCHHHHHHHHHHH-CTTCC-CCHHHHHHH
T ss_pred             HHHHHHHHHhcCCeEEEEcCCCCcHHHHHHHHHHHHHhCCCHHHHHHHHHHH-CCCcC-CCHHHHHHH
Confidence            7777755  46899999999999999999999998 5799999999977755 76665 488887654

>1wrm_A Dual specificity phosphatase 22; DSP, JNK, hydrolase; HET: MES; 1.50A {Homo sapiens}

Probab=99.90  E-value=5.1e-23  Score=162.51  Aligned_cols=129  Identities=16%  Similarity=0.241  Sum_probs=100.2

Q ss_pred             CCccccccceEecCCCChhhHHHHHhcCCcEEEEcCCCCCCCchHHHHhhCCcEEEEeeeCCCCCCCCCCCHHHHHHHHH
Q 028983           55 LNFSMVDNGIFRSGFPDSANFSFLQTLRLRSIIYLCPEPYPEANTEFLKSNGIKLFQFAIEGHKEPFVNIPEDMIREALK  134 (201)
Q Consensus        55 ~nf~~V~~~Lyrsg~p~~~~l~~L~~lGIktII~Lr~e~~~~~~~~~~~~~gi~~~~ipi~d~~~p~~~i~~~~i~~~l~  134 (201)
                      .++.+|.|+||+|+++.+.+++.|+++||++||||+.+..+.       ..|++|+++|+.|...+.  +. +.+.++++
T Consensus         5 ~~~~~I~~~lylG~~~~~~d~~~L~~~gI~~Vi~l~~~~~~~-------~~~i~~~~ip~~D~~~~~--l~-~~~~~~~~   74 (165)
T 1wrm_A            5 NGMNKILPGLYIGNFKDARDAEQLSKNKVTHILSVHDSARPM-------LEGVKYLCIPAADSPSQN--LT-RHFKESIK   74 (165)
T ss_dssp             SSCEEEETTEEEECTTGGGCHHHHHHTTEEEEEECSTTCCCC-------STTCEEEECCCCSSTTSC--CG-GGHHHHHH
T ss_pred             CchheEECCEEECChhHhcCHHHHHHCCCcEEEEecCCCCCC-------CCCCeEEEEECCCCCCcc--HH-HHHHHHHH
Confidence            568899999999999999999999999999999999874321       258999999999864432  21 23344444


Q ss_pred             HHHc--cCCCcEEEEcCCCCChHHHHHHHHHHH-CCCCHHHHHHHHHHHhcCCCCchhhhhHhh
Q 028983          135 VLLD--VRNHPVLIHCKRGKHRTGCLVGCLRKL-QKWCLSSVFDEYQRFAAAKARVSDQRGTRI  195 (201)
Q Consensus       135 ~l~~--~~~~pVLVHC~aG~~RTG~vva~~l~~-~g~s~~~ai~ey~~~~~~~~~~~~~~Fie~  195 (201)
                      +|..  ..++||||||.+|++|||+++++|++. .||+.++|++.++.. ++.+. .|.+|+++
T Consensus        75 fi~~~~~~~~~VlVHC~aG~~RSg~~~~ayLm~~~~~~~~~A~~~v~~~-R~~~~-pn~~f~~q  136 (165)
T 1wrm_A           75 FIHECRLRGESCLVHCLAGVSRSVTLVIAYIMTVTDFGWEDALHTVRAG-RSCAN-PNVGFQRQ  136 (165)
T ss_dssp             HHHHHHHTTCEEEEECSSSSSHHHHHHHHHHHHTSSCCHHHHHHHHHHH-CTTCC-CCHHHHHH
T ss_pred             HHHHHHHCCCeEEEECCCCCChhHHHHHHHHHHHcCCCHHHHHHHHHHH-CCCcC-CCHhHHHH
Confidence            4432  368999999999999999998888875 699999999877755 66554 46666654

>1fpz_A Cyclin-dependent kinase inhibitor 3; alpha-beta sandwich, hydrolase; 2.00A {Homo sapiens} SCOP: c.45.1.1 PDB: 1fq1_A*

Probab=99.90  E-value=4.3e-23  Score=169.07  Aligned_cols=144  Identities=15%  Similarity=0.204  Sum_probs=112.5

Q ss_pred             eeCCCCccccccc-------eEecCCCC----------hhhHHHHHhcCCcEEEEcCCC----CCC-CchHHHHhhCCcE
Q 028983           51 LIPPLNFSMVDNG-------IFRSGFPD----------SANFSFLQTLRLRSIIYLCPE----PYP-EANTEFLKSNGIK  108 (201)
Q Consensus        51 ~~pp~nf~~V~~~-------Lyrsg~p~----------~~~l~~L~~lGIktII~Lr~e----~~~-~~~~~~~~~~gi~  108 (201)
                      ..+|.||.||.++       |..++.|.          ..+++.|+++||++||||+.+    .+. ..+.+.+...|++
T Consensus        23 ~~~p~~~~~v~~~~~~~~g~l~~~~~Pg~~~~~~~~~~~~d~~~L~~~gi~~Vv~l~~~~E~~~~~~~~~~~~~~~~gi~  102 (212)
T 1fpz_A           23 EQTPIHISWLSLSRVNCSQFLGLCALPGCKFKDVRRNVQKDTEELKSCGIQDIFVFCTRGELSKYRVPNLLDLYQQCGII  102 (212)
T ss_dssp             --CCCCCEEEECGGGTCCCEEEEESCTTCEETTEECCHHHHHHHHHHHTCCEEEECCCHHHHHHTTCTTHHHHHHHTTCE
T ss_pred             cCCCcceEEeccCCcCCCCeEEEecCCCCCCccchhhHHHHHHHHHHCCCCEEEEcCCHHHHHhcCCccHHHHHHHcCCE
Confidence            3568999999764       55677774          568999999999999999985    121 2345567788999


Q ss_pred             EEEeeeCCCCCCCCCCCHHHHHHHHHHHHc--cCCCcEEEEcCCCCChHHHHHHHHHHH--CCCCHHHHHHHHHHHhcCC
Q 028983          109 LFQFAIEGHKEPFVNIPEDMIREALKVLLD--VRNHPVLIHCKRGKHRTGCLVGCLRKL--QKWCLSSVFDEYQRFAAAK  184 (201)
Q Consensus       109 ~~~ipi~d~~~p~~~i~~~~i~~~l~~l~~--~~~~pVLVHC~aG~~RTG~vva~~l~~--~g~s~~~ai~ey~~~~~~~  184 (201)
                      |+++|+.|...|.    .+.+.++++++..  ..++||||||++|+||||+++++||+.  .||+.++|++.++...++.
T Consensus       103 ~~~~pi~d~~~p~----~~~~~~~~~~i~~~~~~~~~VlVHC~aG~gRTg~~~a~~L~~~~~g~~~~~a~~~vr~~R~~~  178 (212)
T 1fpz_A          103 THHHPIADGGTPD----IASCCEIMEELTTCLKNYRKTLIHSYGGLGRSCLVAACLLLYLSDTISPEQAIDSLRDLRGSG  178 (212)
T ss_dssp             EEECCCCTTCCCC----HHHHHHHHHHHHHHHHTTCCEEEECSSSSSHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHCTT
T ss_pred             EEEecCCCCCCCC----HHHHHHHHHHHHHHHhCCCCEEEECCCCCCHHHHHHHHHHHHhccCCCHHHHHHHHHHhCCCC
Confidence            9999999987774    4566667776654  368999999999999999999999997  3999999999998875255


Q ss_pred             CC--chhhhhHhhhcc
Q 028983          185 AR--VSDQRGTRILSP  198 (201)
Q Consensus       185 ~~--~~~~~Fie~f~~  198 (201)
                      +.  ..|..|+..|.-
T Consensus       179 ~~~~~~Q~~~l~~~~~  194 (212)
T 1fpz_A          179 AIQTIKQYNYLHEFRD  194 (212)
T ss_dssp             SSCSHHHHHHHTTHHH
T ss_pred             CCCCHHHHHHHHHHHH
Confidence            53  357788888764

>2i6j_A Ssoptp, sulfolobus solfataricus protein tyrosine phosphatase; PTP domain, hydrolase; 1.66A {Sulfolobus solfataricus} PDB: 2i6i_A 2i6m_A 3ro1_A* 2i6o_A* 2dxp_A* 2i6p_A*

Probab=99.90  E-value=3.8e-23  Score=161.05  Aligned_cols=135  Identities=21%  Similarity=0.235  Sum_probs=106.8

Q ss_pred             cccccc-eEecCCCC-hhhHHHHHhcCCcEEEEcCCC-CCCC------chHHHHhhCCcEEEEeeeCCCCCCCCCCCHHH
Q 028983           58 SMVDNG-IFRSGFPD-SANFSFLQTLRLRSIIYLCPE-PYPE------ANTEFLKSNGIKLFQFAIEGHKEPFVNIPEDM  128 (201)
Q Consensus        58 ~~V~~~-Lyrsg~p~-~~~l~~L~~lGIktII~Lr~e-~~~~------~~~~~~~~~gi~~~~ipi~d~~~p~~~i~~~~  128 (201)
                      +||.++ ||+|++|. ..+++.|+++||++||||+++ +...      .+.+.+...|++|+++|+.|...|.    .+.
T Consensus         2 ~~I~~~~l~~~~~~~~~~d~~~L~~~gi~~Vi~l~~~~e~~~~~~~~~~~~~~~~~~gi~~~~~p~~d~~~p~----~~~   77 (161)
T 2i6j_A            2 YWVRRKTIGGSGLPYTENEILEWRKEGVKRVLVLPEDWEIEESWGDKDYYLSILKKNGLQPLHIPIPDGGVPS----DSQ   77 (161)
T ss_dssp             EEEETTTEEEECCCSSHHHHHHHHHHTCCEEEECSCHHHHHHHHSCHHHHHHHHHHTTCEEEECCCCTTCCCC----HHH
T ss_pred             CcccccceeecCCCCCHHHHHHHHHCCCCEEEEcCchhhhhhhccchhhHHHHHHHcCceEEEecCCCCCCCC----hHH
Confidence            578899 99999998 578999999999999999986 2211      1223366789999999998887764    567


Q ss_pred             HHHHHHHHHccCCCcEEEEcCCCCChHHHHHHHHHHHC-CCCHHHHHHHHHHHhcCCCC--chhhhhHhhhcc
Q 028983          129 IREALKVLLDVRNHPVLIHCKRGKHRTGCLVGCLRKLQ-KWCLSSVFDEYQRFAAAKAR--VSDQRGTRILSP  198 (201)
Q Consensus       129 i~~~l~~l~~~~~~pVLVHC~aG~~RTG~vva~~l~~~-g~s~~~ai~ey~~~~~~~~~--~~~~~Fie~f~~  198 (201)
                      +.++++++.+....+ +|||++|+||||+++++|++.. ||+.++|++.++.. ++...  ..+..|+..|.-
T Consensus        78 ~~~~~~~i~~~~~~~-lVHC~aG~~Rtg~~~~~~l~~~~~~~~~~a~~~~r~~-R~~~~~~~~q~~~l~~~~~  148 (161)
T 2i6j_A           78 FLTIMKWLLSEKEGN-LVHCVGGIGRTGTILASYLILTEGLEVESAIDEVRLV-RPGAVQTYEQEMFLLRVEG  148 (161)
T ss_dssp             HHHHHHHHHHCCTTE-EEECSSSSHHHHHHHHHHHHHHHCCCHHHHHHHHHHH-STTCSCSHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCC-EEECCCCCCHHHHHHHHHHHHHcCCCHHHHHHHHHHh-CcccCCCHHHHHHHHHHHH
Confidence            888888887643334 9999999999999999999976 99999999988876 55443  356667766653

>2hxp_A Dual specificity protein phosphatase 9; human phosphatase, structural genomics, PSI-2, protein structure initiative; 1.83A {Homo sapiens} PDB: 3lj8_A 1mkp_A

Probab=99.90  E-value=2.6e-23  Score=162.79  Aligned_cols=129  Identities=20%  Similarity=0.252  Sum_probs=101.1

Q ss_pred             cccccceEecCCCChhhHHHHHhcCCcEEEEcCCCCCCCchHHHHhhC-CcEEEEeeeCCCCCCCCCCCHHHHHHHHHHH
Q 028983           58 SMVDNGIFRSGFPDSANFSFLQTLRLRSIIYLCPEPYPEANTEFLKSN-GIKLFQFAIEGHKEPFVNIPEDMIREALKVL  136 (201)
Q Consensus        58 ~~V~~~Lyrsg~p~~~~l~~L~~lGIktII~Lr~e~~~~~~~~~~~~~-gi~~~~ipi~d~~~p~~~i~~~~i~~~l~~l  136 (201)
                      .+|.|+||+|+++.+.+++.|+++||++||||+++.. .    .+... +++|+++|+.|...+.  + .+.+.++++++
T Consensus         7 ~~I~~~lylg~~~~~~d~~~L~~~gI~~Vi~l~~~~~-~----~~~~~~~i~~~~ipi~D~~~~~--l-~~~~~~~~~fi   78 (155)
T 2hxp_A            7 VQILPNLYLGSARDSANLESLAKLGIRYILNVTPNLP-N----FFEKNGDFHYKQIPISDHWSQN--L-SRFFPEAIEFI   78 (155)
T ss_dssp             EEEETTEEEECTTGGGCHHHHHHTTEEEEEECSSSCC-C----TTTTCTTCEEEECCCCGGGGGG--H-HHHHHHHHHHH
T ss_pred             eEEECCEEECChhhhcCHHHHHHCCCCEEEEeCCCCc-c----cccCCCCeEEEEEECccCCCCC--H-HHHHHHHHHHH
Confidence            5788999999999999999999999999999998632 1    22334 4999999999865442  1 23455666665


Q ss_pred             Hc--cCCCcEEEEcCCCCChHHHHHHHHHHH-CCCCHHHHHHHHHHHhcCCCCchhhhhHhhh
Q 028983          137 LD--VRNHPVLIHCKRGKHRTGCLVGCLRKL-QKWCLSSVFDEYQRFAAAKARVSDQRGTRIL  196 (201)
Q Consensus       137 ~~--~~~~pVLVHC~aG~~RTG~vva~~l~~-~g~s~~~ai~ey~~~~~~~~~~~~~~Fie~f  196 (201)
                      .+  ..++||||||.+|++|||+++++|++. .||+.++|++.++.. ++.+. .|.+|+++.
T Consensus        79 ~~~~~~~~~VlVHC~~G~~RS~~vv~ayLm~~~~~~~~~A~~~v~~~-R~~~~-pn~~f~~qL  139 (155)
T 2hxp_A           79 DEALSQNCGVLVHSLAGVSRSVTVTVAYLMQKLHLSLNDAYDLVKRK-KSNIS-PNFNFMGQL  139 (155)
T ss_dssp             HHHHHTTCEEEEECSSSSSHHHHHHHHHHHHHHTCCHHHHHHHHHHH-CSCCC-CCHHHHHHH
T ss_pred             HHHHHcCCcEEEECCCCCchhHHHHHHHHHHHcCCCHHHHHHHHHHH-CCCcC-CCHHHHHHH
Confidence            44  268999999999999999999999884 699999999966654 66564 477887654

>2nt2_A Protein phosphatase slingshot homolog 2; alpha/beta hydrolase; 2.10A {Homo sapiens}

Probab=99.90  E-value=3.6e-23  Score=159.70  Aligned_cols=129  Identities=15%  Similarity=0.139  Sum_probs=98.9

Q ss_pred             ccccccceEecCCCChhhHHHHHhcCCcEEEEcCCCCCCCchHHHHhhCCcEEEEeeeCCCCCCCCCCCHHHHHHHHHHH
Q 028983           57 FSMVDNGIFRSGFPDSANFSFLQTLRLRSIIYLCPEPYPEANTEFLKSNGIKLFQFAIEGHKEPFVNIPEDMIREALKVL  136 (201)
Q Consensus        57 f~~V~~~Lyrsg~p~~~~l~~L~~lGIktII~Lr~e~~~~~~~~~~~~~gi~~~~ipi~d~~~p~~~i~~~~i~~~l~~l  136 (201)
                      ..+|.++||+|+++.+.+++.|+++||++||||+.+... ..     ..|++|+++|+.|...+.  + .+.+.++++++
T Consensus         4 ~~~I~~~lylg~~~~~~~~~~L~~~gi~~Vi~l~~~~~~-~~-----~~~~~~~~ipi~D~~~~~--l-~~~~~~~~~fi   74 (145)
T 2nt2_A            4 PTQIFEHVFLGSEWNASNLEDLQNRGVRYILNVTREIDN-FF-----PGVFEYHNIRVYDEEATD--L-LAYWNDTYKFI   74 (145)
T ss_dssp             CEEEETTEEEECHHHHTCHHHHHHTTEEEEEECCSSSCC-SC-----BTTBEEEECCCCSSTTCC--C-GGGHHHHHHHH
T ss_pred             ccEeeCCEEECChhHhCCHHHHHHCCCCEEEEeCCCCcc-CC-----CCCcEEEEEEEeCCCCCc--H-HHHHHHHHHHH
Confidence            467889999999999999999999999999999987321 11     248999999999864442  2 12334444444


Q ss_pred             Hc--cCCCcEEEEcCCCCChHHHHHHHHHHH-CCCCHHHHHHHHHHHhcCCCCchhhhhHhhh
Q 028983          137 LD--VRNHPVLIHCKRGKHRTGCLVGCLRKL-QKWCLSSVFDEYQRFAAAKARVSDQRGTRIL  196 (201)
Q Consensus       137 ~~--~~~~pVLVHC~aG~~RTG~vva~~l~~-~g~s~~~ai~ey~~~~~~~~~~~~~~Fie~f  196 (201)
                      .+  ..++||||||.+|++|||+++++|++. .||+.++|++.++.. ++.+. .|.+|+++.
T Consensus        75 ~~~~~~~~~VlVHC~~G~~RS~~~v~ayLm~~~~~~~~~A~~~v~~~-R~~~~-pn~~f~~qL  135 (145)
T 2nt2_A           75 SKAKKHGSKCLVHSKMGVSRSASTVIAYAMKEYGWNLDRAYDYVKER-RTVTK-PNPSFMRQL  135 (145)
T ss_dssp             HHHHHTTCEEEEECSSSSSHHHHHHHHHHHHHHCCCHHHHHHHHHHH-CTTCC-CCHHHHHHH
T ss_pred             HHHHHcCCeEEEECCCCCchHHHHHHHHHHHHhCCCHHHHHHHHHHH-CCCcC-CCHHHHHHH
Confidence            32  268999999999999999999988885 699999999866654 76554 477777653

>2esb_A Dual specificity protein phosphatase 18; alpha/beta structure, hydrolase; HET: EPE; 2.00A {Homo sapiens}

Probab=99.89  E-value=1.5e-22  Score=163.58  Aligned_cols=131  Identities=13%  Similarity=0.138  Sum_probs=101.7

Q ss_pred             CCCccccccceEecCCCChhhHHHHHhcCCcEEEEcCCCCCCCchHHHHhhCCcEEEEeeeCCCCCCCCCCCHHHHHHHH
Q 028983           54 PLNFSMVDNGIFRSGFPDSANFSFLQTLRLRSIIYLCPEPYPEANTEFLKSNGIKLFQFAIEGHKEPFVNIPEDMIREAL  133 (201)
Q Consensus        54 p~nf~~V~~~Lyrsg~p~~~~l~~L~~lGIktII~Lr~e~~~~~~~~~~~~~gi~~~~ipi~d~~~p~~~i~~~~i~~~l  133 (201)
                      ..++.+|.++||.|+++.+.+.+.|+++||++||||+.+.....      ..|++|+++|+.|...+.  + .+.+.+++
T Consensus        17 ~~~~~~I~~~LylG~~~~a~d~~~L~~~gIt~Vi~l~~~~~~~~------~~~i~~~~ipi~D~~~~~--~-~~~~~~~~   87 (188)
T 2esb_A           17 VSGLSQITKSLYISNGVAANNKLMLSSNQITMVINVSVEVVNTL------YEDIQYMQVPVADSPNSR--L-CDFFDPIA   87 (188)
T ss_dssp             -CCCEEEETTEEEECTTGGGCHHHHHHTTCCEEEECCSSCCCCC------CTTCEEEECCCCSCTTSC--G-GGGHHHHH
T ss_pred             CCCceEEeCCEEEcCchHhcCHHHHHHCCCcEEEEecCCCCCcC------CCCCEEEEEeCcCCCCcc--H-HHHHHHHH
Confidence            35789999999999999999999999999999999998743211      259999999999865432  2 23344455


Q ss_pred             HHHHc--cCCCcEEEEcCCCCChHHHHHHHHHH-HCCCCHHHHHHHHHHHhcCCCCchhhhhHhh
Q 028983          134 KVLLD--VRNHPVLIHCKRGKHRTGCLVGCLRK-LQKWCLSSVFDEYQRFAAAKARVSDQRGTRI  195 (201)
Q Consensus       134 ~~l~~--~~~~pVLVHC~aG~~RTG~vva~~l~-~~g~s~~~ai~ey~~~~~~~~~~~~~~Fie~  195 (201)
                      ++|.+  ..+++|||||.+|++|||+++++|++ ..||+.++|++.++.. ++.+. .|.+|+++
T Consensus        88 ~fI~~~~~~~~~VLVHC~aG~sRS~~vv~ayLm~~~~~s~~~A~~~v~~~-Rp~~~-pn~~f~~q  150 (188)
T 2esb_A           88 DHIHSVEMKQGRTLLHCAAGVSRSAALCLAYLMKYHAMSLLDAHTWTKSC-RPIIR-PNSGFWEQ  150 (188)
T ss_dssp             HHHHHHHHTTCCEEEECSSSSSHHHHHHHHHHHHHSCCCHHHHHHHHHHH-CTTCC-CCHHHHHH
T ss_pred             HHHHHHHHcCCEEEEECCCCCchHHHHHHHHHHHHcCCCHHHHHHHHHHH-CCccC-CCHHHHHH
Confidence            55433  36899999999999999999988888 5799999999866654 76554 47777654

>2pq5_A Dual specificity protein phosphatase 13; hydrolase, dual specificity phosphatase, DUSP13, testis and skeletal muscle specific DSP; 2.30A {Homo sapiens} PDB: 2gwo_A

Probab=99.89  E-value=4.7e-23  Score=168.68  Aligned_cols=136  Identities=14%  Similarity=0.183  Sum_probs=104.7

Q ss_pred             CCccccccceEecCCCChhhHHHHHhcCCcEEEEcCCCCCCC-chHHHHhhCCcEEEEeeeCCCCCCCCCCCHHHHHHHH
Q 028983           55 LNFSMVDNGIFRSGFPDSANFSFLQTLRLRSIIYLCPEPYPE-ANTEFLKSNGIKLFQFAIEGHKEPFVNIPEDMIREAL  133 (201)
Q Consensus        55 ~nf~~V~~~Lyrsg~p~~~~l~~L~~lGIktII~Lr~e~~~~-~~~~~~~~~gi~~~~ipi~d~~~p~~~i~~~~i~~~l  133 (201)
                      .++..|.|+||+|+++.+.+++.|+++||++||||+.+.+.. ....+++..|++|+++|+.|....  ++. ..+.+++
T Consensus        44 ~~~~~I~p~LylG~~~~a~d~~~L~~~gIt~Vinl~~~~~~~~~~~~~~~~~~i~y~~ipi~D~p~~--dl~-~~f~~~~  120 (205)
T 2pq5_A           44 NHIDEVWPSLFLGDAYAARDKSKLIQLGITHVVNAAAGKFQVDTGAKFYRGMSLEYYGIEADDNPFF--DLS-VYFLPVA  120 (205)
T ss_dssp             ESEEEEETTEEEECHHHHHCHHHHHHHTCCEEEETBCSTTSCCCHHHHTTTSSCEEEECBCCCCTTS--CGG-GGHHHHH
T ss_pred             CCceEEECCEEECChhHhcCHHHHHHcCCeEEEEeCCCcccCCcchhhhccCCceEEeeecCCCCcc--hHH-HHHHHHH
Confidence            578889999999999999999999999999999999864322 223455667999999999885332  332 2233344


Q ss_pred             HHHH---ccCCCcEEEEcCCCCChHHHHHHHHHH-HCCCCHHHHHHHHHHHhcCCCCchhhhhHhhh
Q 028983          134 KVLL---DVRNHPVLIHCKRGKHRTGCLVGCLRK-LQKWCLSSVFDEYQRFAAAKARVSDQRGTRIL  196 (201)
Q Consensus       134 ~~l~---~~~~~pVLVHC~aG~~RTG~vva~~l~-~~g~s~~~ai~ey~~~~~~~~~~~~~~Fie~f  196 (201)
                      ++|.   +..+++|||||.+|++|||+++++|++ ..||+.++|++.++.. ++ . ..|.+|+++.
T Consensus       121 ~fI~~~l~~~~~~VLVHC~aG~sRS~tvv~aYLm~~~~~s~~~A~~~vr~~-R~-i-~pn~gf~~qL  184 (205)
T 2pq5_A          121 RYIRAALSVPQGRVLVHCAMGVSRSATLVLAFLMIYENMTLVEAIQTVQAH-RN-I-CPNSGFLRQL  184 (205)
T ss_dssp             HHHHHHHTSTTCCEEEECSSSSSHHHHHHHHHHHHHSCCCHHHHHHHHTTT-SC-C-CCCHHHHHHH
T ss_pred             HHHHHHHhcCCCeEEEECCCCCcHHHHHHHHHHHHHcCCCHHHHHHHHHHc-CC-C-CCCHHHHHHH
Confidence            4433   236899999999999999999999988 5799999999977644 55 4 4688888764

>2r0b_A Serine/threonine/tyrosine-interacting protein; structural genomics, phosphatase, PSI-2, protein structure initiative; 1.60A {Homo sapiens}

Probab=99.89  E-value=8.8e-23  Score=158.66  Aligned_cols=137  Identities=15%  Similarity=0.115  Sum_probs=98.6

Q ss_pred             CCccccccceEecCCCCh--hhHHHHHhcCCcEEEEcCCCCCCCc-hHHHHhhCCcEEEEeeeCCCCCCCCCCCHHHHHH
Q 028983           55 LNFSMVDNGIFRSGFPDS--ANFSFLQTLRLRSIIYLCPEPYPEA-NTEFLKSNGIKLFQFAIEGHKEPFVNIPEDMIRE  131 (201)
Q Consensus        55 ~nf~~V~~~Lyrsg~p~~--~~l~~L~~lGIktII~Lr~e~~~~~-~~~~~~~~gi~~~~ipi~d~~~p~~~i~~~~i~~  131 (201)
                      .++.+|.|+||.|+.+..  .+++.|+++||++||||+.+..... ...+  ..|++|+++|+.|...+...-..+.+.+
T Consensus         4 ~~~~~I~~~lylG~~~~~~~~d~~~L~~~gI~~Vi~l~~~~e~~~~~~~~--~~~~~~~~ip~~d~~~~~l~~~~~~~~~   81 (154)
T 2r0b_A            4 REMQEILPGLFLGPYSSAMKSKLPVLQKHGITHIICIRQNIEANFIKPNF--QQLFRYLVLDIADNPVENIIRFFPMTKE   81 (154)
T ss_dssp             CSCEEEETTEEEECGGGGSGGGHHHHHHTTCCEEEEEECGGGTTTSSCCC--TTTSEEEEEECCSSTTSCCGGGHHHHHH
T ss_pred             cchheEeCCeEECCHHHhhhccHHHHHHcCCeEEEEeCCccccccCCCCC--cCceeEEEEECCCCCcccHHHHHHHHHH
Confidence            457889999999999876  6899999999999999997621100 0011  2589999999998644321111233333


Q ss_pred             HHHHHHccCCCcEEEEcCCCCChHHHHHHHHHHH-CCCCHHHHHHHHHHHhcCCCCchhhhhHhhh
Q 028983          132 ALKVLLDVRNHPVLIHCKRGKHRTGCLVGCLRKL-QKWCLSSVFDEYQRFAAAKARVSDQRGTRIL  196 (201)
Q Consensus       132 ~l~~l~~~~~~pVLVHC~aG~~RTG~vva~~l~~-~g~s~~~ai~ey~~~~~~~~~~~~~~Fie~f  196 (201)
                      +++...+ .++||||||.+|++|||+++++|++. .||+.++|++.++.. ++.+. .|.+|+++.
T Consensus        82 ~i~~~~~-~~~~vlvHC~aG~~RS~~~~~ayl~~~~~~~~~~a~~~v~~~-R~~~~-pn~~f~~qL  144 (154)
T 2r0b_A           82 FIDGSLQ-MGGKVLVHGNAGISRSAAFVIAYIMETFGMKYRDAFAYVQER-RFCIN-PNAGFVHQL  144 (154)
T ss_dssp             HHHHHHH-TTCCEEEECSSSSSHHHHHHHHHHHHHHTCCHHHHHHHHHHH-STTCC-CCHHHHHHH
T ss_pred             HHHHHHh-cCCCEEEEcCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHH-CCccC-CCHHHHHHH
Confidence            4444333 68999999999999999999998885 799999999866655 66554 466776543

>2y96_A Dual specificity phosphatase DUPD1; hydrolase; 2.38A {Homo sapiens}

Probab=99.89  E-value=9.8e-23  Score=168.72  Aligned_cols=136  Identities=10%  Similarity=0.151  Sum_probs=106.2

Q ss_pred             CCccccccceEecCCCChhhHHHHHhcCCcEEEEcCCCCCC-CchHHHHhhCCcEEEEeeeCCCCCCCCCCCHHHHHHHH
Q 028983           55 LNFSMVDNGIFRSGFPDSANFSFLQTLRLRSIIYLCPEPYP-EANTEFLKSNGIKLFQFAIEGHKEPFVNIPEDMIREAL  133 (201)
Q Consensus        55 ~nf~~V~~~Lyrsg~p~~~~l~~L~~lGIktII~Lr~e~~~-~~~~~~~~~~gi~~~~ipi~d~~~p~~~i~~~~i~~~l  133 (201)
                      .++..|.|+||+|+++.+.+++.|+++||++||||+.+.+. .....+++..|++|+++|+.|...+  ++. +.+.+++
T Consensus        52 ~~~~~I~p~LylG~~~~a~d~~~L~~~gIt~VInl~~~~~~~~~~~~~~~~~~i~y~~ipi~D~~~~--~l~-~~~~~~~  128 (219)
T 2y96_A           52 THVNEVWPKLYIGDEATALDRYRLQKAGFTHVLNAAHGRWNVDTGPDYYRDMDIQYHGVEADDLPTF--DLS-VFFYPAA  128 (219)
T ss_dssp             CSEEEEETTEEEECHHHHHCHHHHHHTTCCEEEETTBSTTSBCCHHHHTTTSCCEEEECCCCSSTTS--CGG-GGHHHHH
T ss_pred             CCceEEECCEEECChhHhCCHHHHHHCCCeEEEECCCCccccccchhhhcccCcEEEEEECCCCCch--hHH-HHHHHHH
Confidence            46888999999999999999999999999999999976432 2234566678999999999986444  221 3344444


Q ss_pred             HHHHc---cCCCcEEEEcCCCCChHHHHHHHHHH-HCCCCHHHHHHHHHHHhcCCCCchhhhhHhhh
Q 028983          134 KVLLD---VRNHPVLIHCKRGKHRTGCLVGCLRK-LQKWCLSSVFDEYQRFAAAKARVSDQRGTRIL  196 (201)
Q Consensus       134 ~~l~~---~~~~pVLVHC~aG~~RTG~vva~~l~-~~g~s~~~ai~ey~~~~~~~~~~~~~~Fie~f  196 (201)
                      ++|.+   ..+++|||||.+|++|||+++++|+| ..||+.++|++.++.. ++ + ..|.+|+++.
T Consensus       129 ~fI~~~l~~~~~~VLVHC~aG~sRS~tvv~aYLm~~~~~s~~eAl~~vr~~-R~-i-~pn~~f~~qL  192 (219)
T 2y96_A          129 AFIDRALSDDHSKILVHCVMGRSRSATLVLAYLMIHKDMTLVDAIQQVAKN-RC-V-LPNRGFLKQL  192 (219)
T ss_dssp             HHHHHHHTSTTCCEEEECSSSSSHHHHHHHHHHHHHSCCCHHHHHHHHHTT-SC-C-CCCHHHHHHH
T ss_pred             HHHHHHHHccCCeEEEECCCCCCHHHHHHHHHHHHHcCCCHHHHHHHHHHh-CC-C-CCCHHHHHHH
Confidence            44433   36899999999999999999999988 5799999999988865 54 4 3688887653

>2wgp_A Dual specificity protein phosphatase 14; MKP6, DUSP14, hydrolase, dual specifici phosphatase; 1.88A {Homo sapiens}

Probab=99.89  E-value=1.4e-22  Score=164.00  Aligned_cols=130  Identities=12%  Similarity=0.103  Sum_probs=100.8

Q ss_pred             CCccccccceEecCCCChhhHHHHHhcCCcEEEEcCCCCCCCchHHHHhhCCcEEEEeeeCCCCCCCCCCCHHHHHHHHH
Q 028983           55 LNFSMVDNGIFRSGFPDSANFSFLQTLRLRSIIYLCPEPYPEANTEFLKSNGIKLFQFAIEGHKEPFVNIPEDMIREALK  134 (201)
Q Consensus        55 ~nf~~V~~~Lyrsg~p~~~~l~~L~~lGIktII~Lr~e~~~~~~~~~~~~~gi~~~~ipi~d~~~p~~~i~~~~i~~~l~  134 (201)
                      .++.+|.++||+|+++.+.+++.|+++||++||||+.+.....      ..|++|+++|+.|...+..   .+.+.++++
T Consensus        24 ~~~~~I~~~LylG~~~~a~d~~~L~~~gI~~Vi~l~~~~~~~~------~~gi~y~~ipi~D~~~~~l---~~~~~~~~~   94 (190)
T 2wgp_A           24 GGIAQITSSLFLGRGSVASNRHLLQARGITCIVNATIEIPNFN------WPQFEYVKVPLADMPHAPI---GLYFDTVAD   94 (190)
T ss_dssp             TTEEEEETTEEEECHHHHTCHHHHHHTTCCEEEECCSSSCCCC------CTTSEEEECCCCSSTTSCG---GGGHHHHHH
T ss_pred             CCceEEeCcEEEcChhhhcCHHHHHHCCCcEEEEecCCCCCCC------CCCCEEEEEEcccCCCCCH---HHHHHHHHH
Confidence            5788999999999999999999999999999999998732211      2489999999998765532   123334444


Q ss_pred             HHHc--cCCCcEEEEcCCCCChHHHHHHHHHHH-CCCCHHHHHHHHHHHhcCCCCchhhhhHhh
Q 028983          135 VLLD--VRNHPVLIHCKRGKHRTGCLVGCLRKL-QKWCLSSVFDEYQRFAAAKARVSDQRGTRI  195 (201)
Q Consensus       135 ~l~~--~~~~pVLVHC~aG~~RTG~vva~~l~~-~g~s~~~ai~ey~~~~~~~~~~~~~~Fie~  195 (201)
                      ++..  ..++||||||.+|++|||+++++|++. .||+.++|++.++.. ++.+. .|.+|+++
T Consensus        95 fi~~~~~~~~~VlVHC~aG~~RSgtvv~ayLm~~~~~s~~~A~~~v~~~-R~~~~-pn~~f~~q  156 (190)
T 2wgp_A           95 KIHSVSRKHGATLVHCAAGVSRSATLCIAYLMKFHNVCLLEAYNWVKAR-RPVIR-PNVGFWRQ  156 (190)
T ss_dssp             HHHHHHHTTCCEEEECSSSSSHHHHHHHHHHHHHHCCCHHHHHHHHHHH-CTTCC-CCHHHHHH
T ss_pred             HHHHHHhcCCCEEEECCCCCCHHHHHHHHHHHHHcCCCHHHHHHHHHHH-CCCcC-CCHHHHHH
Confidence            4432  268999999999999999999988885 699999999877655 66554 46667654

>3s4o_A Protein tyrosine phosphatase-like protein; structural genomics, medical structural genomics of pathogen protozoa, MSGPP, unknown function; HET: MSE EPE; 2.30A {Leishmania major}

Probab=99.88  E-value=6.1e-22  Score=154.64  Aligned_cols=127  Identities=17%  Similarity=0.216  Sum_probs=100.3

Q ss_pred             ceEecCCCChh----hHHHHHhcCCcEEEEcCCCCCCCchHHHHhhCCcEEEEeeeCCCCCCCCCCCHHHHHHHHHHHHc
Q 028983           63 GIFRSGFPDSA----NFSFLQTLRLRSIIYLCPEPYPEANTEFLKSNGIKLFQFAIEGHKEPFVNIPEDMIREALKVLLD  138 (201)
Q Consensus        63 ~Lyrsg~p~~~----~l~~L~~lGIktII~Lr~e~~~~~~~~~~~~~gi~~~~ipi~d~~~p~~~i~~~~i~~~l~~l~~  138 (201)
                      .+.++..|...    +++.|+++||++||+|+.+.+.   ...++..|++|+++|+.|...|.    .+.+.++++.+..
T Consensus        24 ~~i~tq~P~~~t~~~~~~~l~~~gi~~Iv~l~~~~~~---~~~~~~~~i~~~~~p~~d~~~p~----~~~~~~~~~~i~~   96 (167)
T 3s4o_A           24 HFLILDAPSPSNLPTYIKELQHRGVRHLVRVCGPTYD---ATLVKSRGIDVHSWPFDDGAPPT----RAVLDSWLKLLDT   96 (167)
T ss_dssp             EEEEECCCCGGGHHHHHHHHHTTTEEEEEECSCCCSC---THHHHTTTCEEEECCCCTTCCCC----HHHHHHHHHHHHH
T ss_pred             eEEEeCCCchhhHHHHHHHHHHCCCCEEEECCCCCCC---HHHHHHCCCeEEEeccCCCCCCC----HHHHHHHHHHHHH
Confidence            46677778753    5788999999999999988543   34566789999999999987774    3445555544432


Q ss_pred             ----------cCCCcEEEEcCCCCChHHHHHHHHHHHC-CCCHHHHHHHHHHHhcCCC-CchhhhhHhhhc
Q 028983          139 ----------VRNHPVLIHCKRGKHRTGCLVGCLRKLQ-KWCLSSVFDEYQRFAAAKA-RVSDQRGTRILS  197 (201)
Q Consensus       139 ----------~~~~pVLVHC~aG~~RTG~vva~~l~~~-g~s~~~ai~ey~~~~~~~~-~~~~~~Fie~f~  197 (201)
                                ..++||||||++|+||||+++++||+.. ||+.++|++.+++. |+.+ ...|.+|++.|+
T Consensus        97 ~~~~~~~~~~~~~~~vlVHC~aG~~RTg~~~a~~L~~~~~~~~~~a~~~vr~~-R~~~v~~~Q~~fl~~~~  166 (167)
T 3s4o_A           97 ELARQQEDPSVPPPTIGVHCVAGLGRAPILVALALVEYGNVSALDAIALIREK-RKGAINQTQMHWITKYK  166 (167)
T ss_dssp             HHHHHHHCTTCCCCEEEEECSSSSSHHHHHHHHHHHHTTCCCHHHHHHHHHHH-STTCSCHHHHHHHHHCC
T ss_pred             HHHHHhhccccCCCcEEEECCCCCCHHHHHHHHHHHHhCCCCHHHHHHHHHHH-CCCCCCHHHHHHHHhhC
Confidence                      2389999999999999999999999987 99999999998877 4433 457899998886

>1ohe_A CDC14B, CDC14B2 phosphatase; protein phosphatase, cell cycle, hydrolase; HET: SEP; 2.20A {Homo sapiens} SCOP: c.45.1.1 c.45.1.1 PDB: 1ohc_A 1ohd_A

Probab=99.88  E-value=3.3e-22  Score=176.24  Aligned_cols=137  Identities=13%  Similarity=0.187  Sum_probs=112.0

Q ss_pred             eCCCCccccccc-eEecCCCC--------------hhhHHHHHhcCCcEEEEcCCCCCCCchHHHHhhCCcEEEEeeeCC
Q 028983           52 IPPLNFSMVDNG-IFRSGFPD--------------SANFSFLQTLRLRSIIYLCPEPYPEANTEFLKSNGIKLFQFAIEG  116 (201)
Q Consensus        52 ~pp~nf~~V~~~-Lyrsg~p~--------------~~~l~~L~~lGIktII~Lr~e~~~~~~~~~~~~~gi~~~~ipi~d  116 (201)
                      +.+.++.+|.|+ +++++.|.              ..++++|+++||++||||+.+.+.   .+.+...|++|+++|+.|
T Consensus       173 v~~~~~~~I~p~~~i~~~~P~~~~~~~~~~~~~~~~~~~~~L~~~GI~~VInL~~~~y~---~~~~~~~gi~~~~ipi~D  249 (348)
T 1ohe_A          173 AENGDLNWIIPDRFIAFCGPHSRARLESGYHQHSPETYIQYFKNHNVTTIIRLNKRMYD---AKRFTDAGFDHHDLFFAD  249 (348)
T ss_dssp             GGGTCEEEEETTTEEEECCCCSSCBCSTTCCBCCTHHHHHHHHHTTEEEEEECSCCSSC---THHHHTTTCEEEECCCCT
T ss_pred             ccCCCCCEEeCCeEEEECCCccccccccccccCCHHHHHHHHHHcCCCEEEECCCCcCC---hhhhhcCCcEEEEecCCC
Confidence            456788999998 88888874              246889999999999999976442   234566799999999999


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHccCCCcEEEEcCCCCChHHHHHHHHHHH-CCCCHHHHHHHHHHHhcCC-CCchhhhhHh
Q 028983          117 HKEPFVNIPEDMIREALKVLLDVRNHPVLIHCKRGKHRTGCLVGCLRKL-QKWCLSSVFDEYQRFAAAK-ARVSDQRGTR  194 (201)
Q Consensus       117 ~~~p~~~i~~~~i~~~l~~l~~~~~~pVLVHC~aG~~RTG~vva~~l~~-~g~s~~~ai~ey~~~~~~~-~~~~~~~Fie  194 (201)
                      ...|.    .+.+.++++.+.+ .++||+|||++|+||||+++++|++. .||+.++|++.++.. |+. ....|++|++
T Consensus       250 ~~~P~----~~~~~~fi~~~~~-~~~~VLVHC~aG~gRTGtvvaayLm~~~g~s~~eAl~~vr~~-Rp~~i~~pnq~Fl~  323 (348)
T 1ohe_A          250 GSTPT----DAIVKEFLDICEN-AEGAIAVHSKAGLGRTGTLIACYIMKHYRMTAAETIAWVRIC-RPGSVIGPQQQFLV  323 (348)
T ss_dssp             TCCCC----HHHHHHHHHHHHS-CSSEEEEECSSSSHHHHHHHHHHHHHHHCCCHHHHHHHHHHH-STTCSCTHHHHHHH
T ss_pred             CCCCC----HHHHHHHHHHHHh-CCCcEEEECCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHh-CCCCccCHHHHHHH
Confidence            87774    5667778777654 68999999999999999999999997 799999999988877 543 3446999998


Q ss_pred             hhc
Q 028983          195 ILS  197 (201)
Q Consensus       195 ~f~  197 (201)
                      ++.
T Consensus       324 qL~  326 (348)
T 1ohe_A          324 MKQ  326 (348)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            875

>2g6z_A Dual specificity protein phosphatase 5; alpha/beta, hydrolase; 2.70A {Homo sapiens}

Probab=99.87  E-value=5.9e-22  Score=163.56  Aligned_cols=128  Identities=13%  Similarity=0.129  Sum_probs=100.6

Q ss_pred             ccccccceEecCCCChhhHHHHHhcCCcEEEEcCCCCCCCchHHHHhhCCcEEEEeeeCCCCCCCCCCCHHHHHHHHHHH
Q 028983           57 FSMVDNGIFRSGFPDSANFSFLQTLRLRSIIYLCPEPYPEANTEFLKSNGIKLFQFAIEGHKEPFVNIPEDMIREALKVL  136 (201)
Q Consensus        57 f~~V~~~Lyrsg~p~~~~l~~L~~lGIktII~Lr~e~~~~~~~~~~~~~gi~~~~ipi~d~~~p~~~i~~~~i~~~l~~l  136 (201)
                      ..+|.++||+|+++...+++.|+++||++||||+.+... ..     ..|++|+++|+.|...+.  + .+.+.+++++|
T Consensus         6 p~eI~p~LylG~~~~a~d~~~L~~~GIt~VInl~~e~~~-~~-----~~gi~y~~ipi~D~~~~~--l-~~~~~~~~~fI   76 (211)
T 2g6z_A            6 PVEILPFLYLGSAYHASKCEFLANLHITALLNVSRRTSE-AC-----MTHLHYKWIPVEDSHTAD--I-SSHFQEAIDFI   76 (211)
T ss_dssp             CEEEETTEEEEEHHHHTCHHHHHHHTCCEEEECSSCCCC-TT-----CTTSEEEECCCCSSTTSC--C-GGGHHHHHHHH
T ss_pred             CeEEECCEEEcCCccccCHHHHHHCCCCEEEEcCCCCcc-cc-----ccCCEEEEeeCCCCCCCC--H-HHHHHHHHHHH
Confidence            567889999999999999999999999999999987321 11     268999999999876553  2 23444455554


Q ss_pred             Hc--cCCCcEEEEcCCCCChHHHHHHHHHHH-CCCCHHHHHHHHHHHhcCCCCchhhhhHhh
Q 028983          137 LD--VRNHPVLIHCKRGKHRTGCLVGCLRKL-QKWCLSSVFDEYQRFAAAKARVSDQRGTRI  195 (201)
Q Consensus       137 ~~--~~~~pVLVHC~aG~~RTG~vva~~l~~-~g~s~~~ai~ey~~~~~~~~~~~~~~Fie~  195 (201)
                      .+  ..+++|||||.+|++|||+++++||+. .||+.++|++.++.. ++.+. .|.+|+++
T Consensus        77 ~~~~~~~~~VLVHC~aG~sRSgtvv~AYLm~~~g~s~~eAl~~vr~~-Rp~i~-pN~~f~~q  136 (211)
T 2g6z_A           77 DCVREKGGKVLVHSEAGISRSPTICMAYLMKTKQFRLKEAFDYIKQR-RSMVS-PNFGFMGQ  136 (211)
T ss_dssp             HHHHHTTCCEEEEESSSSSHHHHHHHHHHHHHHCCCHHHHHHHHHHH-CTTCC-CCHHHHHH
T ss_pred             HHHHhcCCeEEEECCCCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHH-CCCcC-CCHHHHHH
Confidence            33  368999999999999999999999885 699999999877765 66554 47777665

>1ywf_A Phosphotyrosine protein phosphatase PTPB; four stranded parallel beta sheet with flanking helices, structural genomics, PSI; 1.71A {Mycobacterium tuberculosis} SCOP: c.45.1.5 PDB: 2oz5_A*

Probab=99.87  E-value=7.8e-22  Score=170.27  Aligned_cols=129  Identities=22%  Similarity=0.292  Sum_probs=94.5

Q ss_pred             eCCCCcccc-------ccc-eEecCCCC---hhhHHHHHhcCCcEEEEcCCCCCCCchHHHHhhCCcEEEEeeeCCCCC-
Q 028983           52 IPPLNFSMV-------DNG-IFRSGFPD---SANFSFLQTLRLRSIIYLCPEPYPEANTEFLKSNGIKLFQFAIEGHKE-  119 (201)
Q Consensus        52 ~pp~nf~~V-------~~~-Lyrsg~p~---~~~l~~L~~lGIktII~Lr~e~~~~~~~~~~~~~gi~~~~ipi~d~~~-  119 (201)
                      ....||+-+       .+| ||||++|+   ++++++|+++||++|||||++.............|++|+++|+.+... 
T Consensus        27 ~g~~NfRDlGGy~t~vr~G~lyRS~~l~~lt~~d~~~L~~lGI~tVIDLR~~~E~~~~~pd~~~~Gi~~~~iPi~~~~~~  106 (296)
T 1ywf_A           27 PGAWNFRDVADTATALRPGRLFRSSELSRLDDAGRATLRRLGITDVADLRSSREVARRGPGRVPDGIDVHLLPFPDLADD  106 (296)
T ss_dssp             TTCCSCEEGGGTCTTSCTTSEEEESCCTTCCHHHHHHHHHHTCCEEEECCCHHHHHHHCSCCCCTTCEEEECCCCCSCC-
T ss_pred             CCCCccccCCCccccccCcceeccCCcccCCHHHHHHHHhCCCCEEEECcChhhhhccCCCCCCCCCEEEEecCcccccc
Confidence            345677764       456 99999986   789999999999999999975110000001124699999999987432 


Q ss_pred             ------CC-C----------------CC----C--------------------HHHHHHHHHHHHccCCCcEEEEcCCCC
Q 028983          120 ------PF-V----------------NI----P--------------------EDMIREALKVLLDVRNHPVLIHCKRGK  152 (201)
Q Consensus       120 ------p~-~----------------~i----~--------------------~~~i~~~l~~l~~~~~~pVLVHC~aG~  152 (201)
                            |. .                ..    .                    ...+.++++.+.+  ++||||||++||
T Consensus       107 ~~~~~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~m~~~Y~~~~~~~~~~~~~~~~l~~l~~--~~pvl~HC~aGk  184 (296)
T 1ywf_A          107 DADDSAPHETAFKRLLTNDGSNGESGESSQSINDAATRYMTDEYRQFPTRNGAQRALHRVVTLLAA--GRPVLTHCFAGK  184 (296)
T ss_dssp             ------------------------------CCCHHHHHHHHHHHHHGGGSTTHHHHHHHHHHHHHT--TCCEEEECSSSS
T ss_pred             ccccccchhhHHHHHhhhcccccccchhhhcccchHHHHHHHHHHHHHhcchhHHHHHHHHHHhcc--CCCEEEECCCCC
Confidence                  10 0                00    0                    1235556666653  899999999999


Q ss_pred             ChHHHHHHHHHHHCCCCHHHHHHHHHHHhc
Q 028983          153 HRTGCLVGCLRKLQKWCLSSVFDEYQRFAA  182 (201)
Q Consensus       153 ~RTG~vva~~l~~~g~s~~~ai~ey~~~~~  182 (201)
                      ||||+++||+|..+||+.++|++||.+++.
T Consensus       185 DRTG~~~alll~~~g~~~~~I~~DY~~Tn~  214 (296)
T 1ywf_A          185 DRTGFVVALVLEAVGLDRDVIVADYLRSND  214 (296)
T ss_dssp             SHHHHHHHHHHHHTTCCHHHHHHHHHGGGG
T ss_pred             ccccHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence            999999999999999999999999998854

>1rxd_A Protein tyrosine phosphatase type IVA, member 1; protein tyrosine phosphatase IVA1...; structural genomics, NYSGXRC, unknown function, PSI; 1.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1xm2_A 1zck_A 1r6h_A 1v3a_A

Probab=99.87  E-value=2.3e-21  Score=150.19  Aligned_cols=136  Identities=13%  Similarity=0.203  Sum_probs=101.8

Q ss_pred             CccccccceEecCCCChh---h-HHHHHhcCCcEEEEcCCCCCCCchHHHHhhCCcEEEEeeeCCCCCCCCCCCHHHHHH
Q 028983           56 NFSMVDNGIFRSGFPDSA---N-FSFLQTLRLRSIIYLCPEPYPEANTEFLKSNGIKLFQFAIEGHKEPFVNIPEDMIRE  131 (201)
Q Consensus        56 nf~~V~~~Lyrsg~p~~~---~-l~~L~~lGIktII~Lr~e~~~~~~~~~~~~~gi~~~~ipi~d~~~p~~~i~~~~i~~  131 (201)
                      ++......+|+++.|...   + ++.|.++||++||+|+...+..   ......|+.|+++|+.+...|.    .+.+.+
T Consensus        10 ~~~~~~~~~i~s~~p~~~t~~df~~~l~~~gi~~Iv~l~~~~~~~---~~~~~~~~~~~~~p~~d~~~~~----~~~~~~   82 (159)
T 1rxd_A           10 EVTYKNMRFLITHNPTNATLNKFIEELKKYGVTTIVRVCEATYDT---TLVEKEGIHVLDWPFDDGAPPS----NQIVDD   82 (159)
T ss_dssp             EEEETTEEEEECCCCCGGGHHHHHHHHHHTTEEEEEECSCCCSCC---HHHHHTTCEEEECCC--CCCCC----HHHHHH
T ss_pred             cccCCCceEEEeCCCccccHHHHHHHHHHcCCCEEEEcCCCccCH---HHHHHcCCEEEeCCCcCCCCCC----HHHHHH
Confidence            343444459999999864   3 6889999999999999875432   2345679999999988765553    455555


Q ss_pred             HHHHHHc----cCCCcEEEEcCCCCChHHHHHHHHHHHCCCCHHHHHHHHHHHhcCCCCchhhhhHhhhcc
Q 028983          132 ALKVLLD----VRNHPVLIHCKRGKHRTGCLVGCLRKLQKWCLSSVFDEYQRFAAAKARVSDQRGTRILSP  198 (201)
Q Consensus       132 ~l~~l~~----~~~~pVLVHC~aG~~RTG~vva~~l~~~g~s~~~ai~ey~~~~~~~~~~~~~~Fie~f~~  198 (201)
                      +++.+.+    ..++||+|||++|+||||+++++|++..||+.++|++.++..........+.+|+..|.-
T Consensus        83 ~~~~i~~~~~~~~~~~vlVHC~aG~~Rtg~~~a~~l~~~~~~~~~a~~~vr~~R~~~~~~~q~~~l~~~~~  153 (159)
T 1rxd_A           83 WLSLVKIKFREEPGCCIAVHCVAGLGRAPVLVALALIEGGMKYEDAVQFIRQKRRGAFNSKQLLYLEKYRP  153 (159)
T ss_dssp             HHHHHHHHHHHSTTCEEEEECSSSSTTHHHHHHHHHHHTTCCHHHHHHHHHTTCTTCCCHHHHHHHHHCCC
T ss_pred             HHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
Confidence            6555533    357999999999999999999999999999999999988876333334467788888764

>3rz2_A Protein tyrosine phosphatase type IVA 1; tyrosine phosphatase, dual specific phosphatase, COMP with peptide, hydrolase; 2.80A {Rattus norvegicus} PDB: 1x24_A 1zcl_A

Probab=99.86  E-value=3.4e-21  Score=155.24  Aligned_cols=134  Identities=13%  Similarity=0.212  Sum_probs=105.0

Q ss_pred             cccceEecCCCCh----hhHHHHHhcCCcEEEEcCCCCCCCchHHHHhhCCcEEEEeeeCCCCCCCCCCCHHHHHHHHHH
Q 028983           60 VDNGIFRSGFPDS----ANFSFLQTLRLRSIIYLCPEPYPEANTEFLKSNGIKLFQFAIEGHKEPFVNIPEDMIREALKV  135 (201)
Q Consensus        60 V~~~Lyrsg~p~~----~~l~~L~~lGIktII~Lr~e~~~~~~~~~~~~~gi~~~~ipi~d~~~p~~~i~~~~i~~~l~~  135 (201)
                      ....+..+..|..    .+++.|+++||++||||+.+.+.   ...+...|++|+++|+.|...|.    .+.+.++++.
T Consensus        35 ~~~r~I~tq~P~~~t~~~~~~~L~~~gi~~Iv~l~~~~~~---~~~~~~~~i~~~~~pi~d~~~~~----~~~~~~~~~~  107 (189)
T 3rz2_A           35 KNMRFLITHNPTNATLNKFIEELKKYGVTTIVRVCEATYD---TTLVEKEGIHVLDWPFDDGAPPS----NQIVDDWLSL  107 (189)
T ss_dssp             TTEEEEEECCCCTTTHHHHHHHHHTTTEEEEEECSCCCSC---CHHHHHSSCEEEECCCCSSSCCC----SHHHHHHHHH
T ss_pred             CCCeEEEeCCCCcccHHHHHHHHHHcCCcEEEEeCCCcCC---HHHHHHcCcEEEEecCCCCCCCC----HHHHHHHHHH
Confidence            3344777777764    46789999999999999987543   34556789999999998876654    3556666666


Q ss_pred             HH----ccCCCcEEEEcCCCCChHHHHHHHHHHHCCCCHHHHHHHHHHHhcCCCCchhhhhHhhhcccC
Q 028983          136 LL----DVRNHPVLIHCKRGKHRTGCLVGCLRKLQKWCLSSVFDEYQRFAAAKARVSDQRGTRILSPAL  200 (201)
Q Consensus       136 l~----~~~~~pVLVHC~aG~~RTG~vva~~l~~~g~s~~~ai~ey~~~~~~~~~~~~~~Fie~f~~~~  200 (201)
                      +.    ...++||+|||.+|+||||+++++|++..||+.++|++.++..........+.+|++.|.-.+
T Consensus       108 i~~~~~~~~~~~VlVHC~aG~gRSg~~va~~L~~~g~~~~~a~~~vr~~R~~~v~~~Q~~~l~~~~~~l  176 (189)
T 3rz2_A          108 VKIKFREEPGCCIAVHCVAGLGRAPVLVALALIEGGMKYEDAVQFIRQKRRGAFNSKQLLYLEKYRPKM  176 (189)
T ss_dssp             HHHHHHHSTTCEEEEECSSSSTTHHHHHHHHHHTTTCCHHHHHHHHHTTSSSCCCHHHHHHHHHCCCCC
T ss_pred             HHHHHHhCCCCcEEEECCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHh
Confidence            54    346899999999999999999999999999999999998887744333557889999887543

>3cm3_A Late protein H1, dual specificity protein phosphatase; dual-specificity phosphatase, VH1, hydrolase; 1.32A {Vaccinia virus} PDB: 2rf6_A 2p4d_A

Probab=99.86  E-value=2.3e-21  Score=154.47  Aligned_cols=132  Identities=15%  Similarity=0.246  Sum_probs=100.6

Q ss_pred             eCCCCccccccceEecCCCChhhHHHHHhcCC--cEEEEcCCCCCCCchHHHHhhCCcEEEEeeeCCCCCCCCCCCHHHH
Q 028983           52 IPPLNFSMVDNGIFRSGFPDSANFSFLQTLRL--RSIIYLCPEPYPEANTEFLKSNGIKLFQFAIEGHKEPFVNIPEDMI  129 (201)
Q Consensus        52 ~pp~nf~~V~~~Lyrsg~p~~~~l~~L~~lGI--ktII~Lr~e~~~~~~~~~~~~~gi~~~~ipi~d~~~p~~~i~~~~i  129 (201)
                      .++.++.+|.++||+|+++.+.+.   +++||  ++||||+.+....      ...|++|+++|+.|...+......+.+
T Consensus        27 ~~~~~~~~I~~~lylg~~~~a~~~---~~~gI~~~~Ii~l~~~~~~~------~~~~~~~~~~p~~d~~~~~l~~~~~~~   97 (176)
T 3cm3_A           27 KSPTIMTRVTNNVYLGNYKNAMDA---PSSEVKFKYVLNLTMDKYTL------PNSNINIIHIPLVDDTTTDISKYFDDV   97 (176)
T ss_dssp             CCCCSCEECSSSEEEECHHHHHTG---GGSSSCCSEEEECSSSCCCC------TTSCCEEEECCCCCSSSCCCGGGHHHH
T ss_pred             cCCCCceEEeCCEEEcCHHHhhCH---HHcCCCCCEEEEecCCCCCc------CCCCCEEEEEECCCCCcccHHHHHHHH
Confidence            467899999999999999887766   88999  9999999874321      136899999999987554321112333


Q ss_pred             HHHHHHHHccCCCcEEEEcCCCCChHHHHHHHHHHH-CCCC-----HHHHHHHHHHHhcCCCCchhhhhHhh
Q 028983          130 REALKVLLDVRNHPVLIHCKRGKHRTGCLVGCLRKL-QKWC-----LSSVFDEYQRFAAAKARVSDQRGTRI  195 (201)
Q Consensus       130 ~~~l~~l~~~~~~pVLVHC~aG~~RTG~vva~~l~~-~g~s-----~~~ai~ey~~~~~~~~~~~~~~Fie~  195 (201)
                      .++++.... .++||||||.+|++|||+++++|++. .+|+     .++|++.++.. |+.+. .|.+|+++
T Consensus        98 ~~~i~~~~~-~~~~VlVHC~aG~~RSg~~v~aylm~~~~~~~~~v~~~~A~~~vr~~-R~~~~-pn~~f~~q  166 (176)
T 3cm3_A           98 TAFLSKCDQ-RNEPVLVHSAAGVNRSGAMILAYLMSKNKESLPMLYFLYVYHSMRDL-RGAFV-ENPSFKRQ  166 (176)
T ss_dssp             HHHHHHHHH-HTCCEEEECSSSSSHHHHHHHHHHHHHCCSSCHHHHHHHHHHHHHHH-HSCCC-CCHHHHHH
T ss_pred             HHHHHHHHH-CCCcEEEECCcCCCHHHHHHHHHHHHHhCCCCccccHHHHHHHHHHH-CCCCC-CCHHHHHH
Confidence            344444433 58999999999999999999999995 6999     99999988866 65553 46666654

>2q05_A Late protein H1, dual specificity protein phosphatase; structural genomics, APC7320, P protein structure initiative; HET: MSE; 2.57A {Vaccinia virus WR}

Probab=99.86  E-value=2.9e-21  Score=156.85  Aligned_cols=131  Identities=17%  Similarity=0.299  Sum_probs=98.5

Q ss_pred             eCCCCccccccceEecCCCChhhHHHHHhcCC--cEEEEcCCCCCCCchHHHHhhCCcEEEEeeeCCCCCCCCCCCHHHH
Q 028983           52 IPPLNFSMVDNGIFRSGFPDSANFSFLQTLRL--RSIIYLCPEPYPEANTEFLKSNGIKLFQFAIEGHKEPFVNIPEDMI  129 (201)
Q Consensus        52 ~pp~nf~~V~~~Lyrsg~p~~~~l~~L~~lGI--ktII~Lr~e~~~~~~~~~~~~~gi~~~~ipi~d~~~p~~~i~~~~i  129 (201)
                      .++.++.+|.++||+|+++...+.   +++||  ++||||+.+...      ....|++|+++|+.|...+........+
T Consensus        44 ~~~~~~~~I~~~Lylg~~~~~~~~---~~~gI~~~~Vi~l~~~~~~------~~~~~~~~~~~p~~d~~~~~l~~~~~~~  114 (195)
T 2q05_A           44 KSPTIMTRVTNNVYLGNYKNAMDA---PSSEVKFKYVLNLTMDKYT------LPNSNINIIHIPLVDDTTTDISKYFDDV  114 (195)
T ss_dssp             CBCCSCEECSSSEEEECHHHHHHS---TTSSSCCSEEEECSSSCCC------CTTCCCEEEECCCCCSSSCCCGGGHHHH
T ss_pred             cCCCCCeEEeCCEEECchhhhhCH---HhCCCCCCEEEEECCCCCC------cccCCcEEEEEEcCCCCcccHHHHHHHH
Confidence            357899999999999999887666   88999  999999987432      1236999999999986443211112344


Q ss_pred             HHHHHHHHccCCCcEEEEcCCCCChHHHHHHHHHHH-CCCC-----HHHHHHHHHHHhcCCCCchhhhhHh
Q 028983          130 REALKVLLDVRNHPVLIHCKRGKHRTGCLVGCLRKL-QKWC-----LSSVFDEYQRFAAAKARVSDQRGTR  194 (201)
Q Consensus       130 ~~~l~~l~~~~~~pVLVHC~aG~~RTG~vva~~l~~-~g~s-----~~~ai~ey~~~~~~~~~~~~~~Fie  194 (201)
                      .++++.+.. .++||||||++|++|||+++++|++. .||+     .++|++.++.. |+.+. .+..|++
T Consensus       115 ~~~i~~~~~-~~~~VlVHC~aG~~RSg~~v~~yL~~~~~~~~~~v~~~~A~~~vr~~-R~~~~-~n~~f~~  182 (195)
T 2q05_A          115 TAFLSKCDQ-RNEPVLVHCAAGVNRSGAMILAYLMSKNKESLPMLYFLYVYHSMRDL-RGAFV-ENPSFKR  182 (195)
T ss_dssp             HHHHHHHHH-TTCCEEEECSSSSSHHHHHHHHHHHHHCCSSCHHHHHHHHHHHHHHH-HSCCC-CCHHHHH
T ss_pred             HHHHHHHHH-cCCcEEEEcCCCCChHHHHHHHHHHHHhCCCccccCHHHHHHHHHHH-CCCCC-CCHHHHH
Confidence            445554433 68999999999999999999999995 7999     99999988866 55453 3444443

>3nme_A Ptpkis1 protein, SEX4 glucan phosphatase; dual specificity phosphatase, carbohydrate BIND hydrolase; 2.40A {Arabidopsis thaliana}

Probab=99.85  E-value=1.1e-21  Score=169.09  Aligned_cols=136  Identities=11%  Similarity=0.125  Sum_probs=103.3

Q ss_pred             CCCCccccccceEecCCC-ChhhHHHHHhcCCcEEEEcCCCCC------C-CchHHHHhhC-CcEEEEeeeCCCCCCCCC
Q 028983           53 PPLNFSMVDNGIFRSGFP-DSANFSFLQTLRLRSIIYLCPEPY------P-EANTEFLKSN-GIKLFQFAIEGHKEPFVN  123 (201)
Q Consensus        53 pp~nf~~V~~~Lyrsg~p-~~~~l~~L~~lGIktII~Lr~e~~------~-~~~~~~~~~~-gi~~~~ipi~d~~~p~~~  123 (201)
                      -.+||.+|.|+||.|+.| ++.+++.|+++||++||||+.+..      . ....+.++.. ||+|+++|+.|...|.  
T Consensus         9 ~~~n~s~I~p~LylGs~~~~~~d~~~L~~~GIt~Vlnl~~~~e~~~~g~~~~~~~~~~~~~~gi~~~~ipi~D~~~~~--   86 (294)
T 3nme_A            9 LGMNYNFIRPDLIVGSCLQTPEDVDKLRKIGVKTIFCLQQDPDLEYFGVDISSIQAYAKKYSDIQHIRCEIRDFDAFD--   86 (294)
T ss_dssp             GCCCEEEEETTEEEECCCCSTHHHHHHHHTTEEEEEECCCHHHHHHTTCCHHHHHHHHHTCTTCEEEECCCCTTCHHH--
T ss_pred             CCCCceEEeCCEEEEcCCCCHHHHHHHHHCCCCEEEECCCCcchhhccCChhhhhhhhhhcCCcEEEEEeCCCCCCCC--
Confidence            368999999999999987 578999999999999999998621      1 1123444554 7999999999976542  


Q ss_pred             CCHHHHHHHHHHHHc---cCCCcEEEEcCCCCChHHHHHHHHHHH-CCCCHHHHHHHHHHHhcCCCCchhhhhHh
Q 028983          124 IPEDMIREALKVLLD---VRNHPVLIHCKRGKHRTGCLVGCLRKL-QKWCLSSVFDEYQRFAAAKARVSDQRGTR  194 (201)
Q Consensus       124 i~~~~i~~~l~~l~~---~~~~pVLVHC~aG~~RTG~vva~~l~~-~g~s~~~ai~ey~~~~~~~~~~~~~~Fie  194 (201)
                      + ...+.+++++|.+   ..+++|||||.+|++|||+++++|||. .||+.++|++.++.. |+. . .|..|+.
T Consensus        87 l-~~~~~~~~~~I~~~l~~~g~~VLVHC~aG~sRS~tvv~ayLm~~~g~s~~~A~~~v~~~-Rp~-~-Pn~~~l~  157 (294)
T 3nme_A           87 L-RMRLPAVVGTLYKAVKRNGGVTYVHSTAGMGRAPAVALTYMFWVQGYKLMEAHKLLMSK-RSC-F-PKLDAIR  157 (294)
T ss_dssp             H-HHHHHHHHHHHHHHHHHHCSEEEEECSSSSSHHHHHHHHHHHHTSCCCHHHHHHHHHHH-CCC-C-CCHHHHH
T ss_pred             H-HHHHHHHHHHHHHHHHhCCCEEEEECCCCCchhHHHHHHHHHHHhCCCHHHHHHHHHHh-CCC-C-CChhhhh
Confidence            1 2445556666543   347899999999999999999999996 599999999988766 554 2 3544443

>1yn9_A BVP, polynucleotide 5'-phosphatase; RNA triphosphatase, cysteine phosphatase, P-loop, hydrolase; HET: PO4; 1.50A {Autographa californicanucleopolyhedrovirus}

Probab=99.82  E-value=6.9e-20  Score=144.75  Aligned_cols=113  Identities=17%  Similarity=0.225  Sum_probs=87.0

Q ss_pred             HHH-hcCCcEEEEcCCCCCCCchHHHHhhCCcEEEEeeeCCCCCCCCCCCHHHHHHHHHHHH----ccCCCcEEEEcCCC
Q 028983           77 FLQ-TLRLRSIIYLCPEPYPEANTEFLKSNGIKLFQFAIEGHKEPFVNIPEDMIREALKVLL----DVRNHPVLIHCKRG  151 (201)
Q Consensus        77 ~L~-~lGIktII~Lr~e~~~~~~~~~~~~~gi~~~~ipi~d~~~p~~~i~~~~i~~~l~~l~----~~~~~pVLVHC~aG  151 (201)
                      +|+ +.||++||||+.++.. ...+.+...|++|+++|+.|...|.    .+.+.++++.+.    ...++||+|||++|
T Consensus        49 ll~~~~gi~~Vi~l~~~~~~-~~~~~~~~~gi~~~~~~~~d~~~p~----~~~~~~~~~~~~~~~~~~~~~~vlVHC~aG  123 (169)
T 1yn9_A           49 IVKQNPSIGAIIDLTNTSKY-YDGVHFLRAGLLYKKIQVPGQTLPP----ESIVQEFIDTVKEFTEKCPGMLVGVHCTHG  123 (169)
T ss_dssp             HHHHCTTEEEEEECCSCSCS-CCTHHHHHTTCEEEECCCCSSSCCC----HHHHHHHHHHHHHHHHHSTTSEEEEECSSS
T ss_pred             HHhhCCCcCEEEEcCCCCCC-CCHHHHHhcCCEEEEEeCCCCCCCC----HHHHHHHHHHHHHHHHhCCCCcEEEECCCC
Confidence            555 7999999999976311 1234566789999999999987774    344444444432    23689999999999


Q ss_pred             CChHHHHHHHHHHH-CCCCHHHHHHHHHHHhcCCCCchhhhhHhhh
Q 028983          152 KHRTGCLVGCLRKL-QKWCLSSVFDEYQRFAAAKARVSDQRGTRIL  196 (201)
Q Consensus       152 ~~RTG~vva~~l~~-~g~s~~~ai~ey~~~~~~~~~~~~~~Fie~f  196 (201)
                      +||||+++++||+. .||+.++|++.++.. |+.+. .+.+|+++.
T Consensus       124 ~~RTg~~va~~L~~~~~~~~~~a~~~~r~~-R~~~~-~~~~f~~qL  167 (169)
T 1yn9_A          124 INRTGYMVCRYLMHTLGIAPQEAIDRFEKA-RGHKI-ERQNYVQDL  167 (169)
T ss_dssp             SHHHHHHHHHHHHHHHCCCHHHHHHHHHHH-HTSCC-CCHHHHHHH
T ss_pred             CChHHHHHHHHHHHHhCCCHHHHHHHHHHH-CCCCC-CCHHHHHHH
Confidence            99999999999997 899999999988877 55453 588998864

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=99.77  E-value=5.2e-18  Score=133.22  Aligned_cols=138  Identities=14%  Similarity=0.192  Sum_probs=108.9

Q ss_pred             eeCCCCccccccceEecCCCChhhHHHHHhcCCcEEEEcCCCCCCC---chHHHHhhCCcEEEEeeeCCCCCCCCCCCHH
Q 028983           51 LIPPLNFSMVDNGIFRSGFPDSANFSFLQTLRLRSIIYLCPEPYPE---ANTEFLKSNGIKLFQFAIEGHKEPFVNIPED  127 (201)
Q Consensus        51 ~~pp~nf~~V~~~Lyrsg~p~~~~l~~L~~lGIktII~Lr~e~~~~---~~~~~~~~~gi~~~~ipi~d~~~p~~~i~~~  127 (201)
                      +....||.+|.++||+|++|..+....|++.|+++||+++.+....   ...+.++..|++++++|++.. .|    +.+
T Consensus         9 l~~~~n~~~V~~~l~~s~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~G~~~~~i~~Dv~-~~----~~~   83 (157)
T 3gxh_A            9 LQGIRALQQQAPQLLSSGLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQAGMDYVYIPVDWQ-NP----KVE   83 (157)
T ss_dssp             TTTSTTCEEEETTEEEEBCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHTTCEEEECCCCTT-SC----CHH
T ss_pred             hhcCcChheecCceeEcCCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHcCCeEEEecCCCC-CC----CHH
Confidence            3446899999999999999999999999999999999999763221   235567788999999999543 33    368


Q ss_pred             HHHHHHHHHHccCCCcEEEEcCCCCChHHHHHHHHHHHCCCCHHHHHHHHHHHhcCCCC---chhhhhHhhhc
Q 028983          128 MIREALKVLLDVRNHPVLIHCKRGKHRTGCLVGCLRKLQKWCLSSVFDEYQRFAAAKAR---VSDQRGTRILS  197 (201)
Q Consensus       128 ~i~~~l~~l~~~~~~pVLVHC~aG~~RTG~vva~~l~~~g~s~~~ai~ey~~~~~~~~~---~~~~~Fie~f~  197 (201)
                      .+.++++.+.+..+++|||||++|. |+|.++++|++.+||+.++| +..+ ..+| ..   ...++||+.+.
T Consensus        84 ~v~~~~~~i~~~~G~dVLVnnAgg~-r~~~l~~~~~~~~G~~~~~A-~~v~-~~rp-i~~~~~~w~~~~~~~~  152 (157)
T 3gxh_A           84 DVEAFFAAMDQHKGKDVLVHCLANY-RASAFAYLYQLKQGQNPNMA-QTMT-PWND-ELAIYPKWQALLTEVS  152 (157)
T ss_dssp             HHHHHHHHHHHTTTSCEEEECSBSH-HHHHHHHHHHHHTTCCCCHH-HHTG-GGTT-CGGGCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCCCCEEEECCCCC-CHHHHHHHHHHHcCCCHHHH-HHHH-hhCc-ccCCcHHHHHHHHHHH
Confidence            8999999887655569999999886 99999999998899999999 4444 4465 42   35667777654

>2c46_A MRNA capping enzyme; phosphatase, transferase, hydrolase, mRNA processing, multifunctional enzyme, nucleotidyltransferase; 1.6A {Homo sapiens} PDB: 1i9s_A 1i9t_A

Probab=99.75  E-value=5.7e-18  Score=142.15  Aligned_cols=112  Identities=15%  Similarity=0.333  Sum_probs=86.6

Q ss_pred             HHHHhc--CCcEEEEcCCCC-CCCchHHHHhhCCcEEEEeeeCCC-CCCCCCCCHHHHHHHHHHHHcc----CCCcEEEE
Q 028983           76 SFLQTL--RLRSIIYLCPEP-YPEANTEFLKSNGIKLFQFAIEGH-KEPFVNIPEDMIREALKVLLDV----RNHPVLIH  147 (201)
Q Consensus        76 ~~L~~l--GIktII~Lr~e~-~~~~~~~~~~~~gi~~~~ipi~d~-~~p~~~i~~~~i~~~l~~l~~~----~~~pVLVH  147 (201)
                      ++|++.  ||++||||+.+. +.  ..+.++..||+|+++|+.|+ ..|.    .+.+.++++.+.+.    .++||+||
T Consensus        74 ~~l~~~~~~i~~VInL~~e~~~y--~~~~~~~~gi~y~~~p~~D~~~~P~----~~~l~~~~~~i~~~~~~~~~~~VlVH  147 (241)
T 2c46_A           74 NYLKSLKVKMGLLVDLTNTSRFY--DRNDIEKEGIKYIKLQCKGHGECPT----TENTETFIRLCERFNERNPPELIGVH  147 (241)
T ss_dssp             HHHHHHTCEEEEEEECSSCSCSS--CTHHHHTTTCEEEECCCCCTTCCCC----HHHHHHHHHHHTTC-----CEEEEEE
T ss_pred             HHHHHhCCCcceeeeccCCCCCC--CHHHHHHCCCEEEEEecCCCCCCCC----hHHHHHHHHHHHHHHHhCCCCeEEEE
Confidence            667766  999999999863 22  23456778999999999885 4553    67778888877542    25899999


Q ss_pred             cCCCCChHHHHHHHHHHH-CCCCHHHHHHHHHHHhcCCCCchhhhhHhh
Q 028983          148 CKRGKHRTGCLVGCLRKL-QKWCLSSVFDEYQRFAAAKARVSDQRGTRI  195 (201)
Q Consensus       148 C~aG~~RTG~vva~~l~~-~g~s~~~ai~ey~~~~~~~~~~~~~~Fie~  195 (201)
                      |++|+||||+++++||+. .||+.++|++.++.. |+... .+..|++.
T Consensus       148 C~aG~gRTGt~ia~yLm~~~~~s~~eAi~~vr~~-R~~~i-~~~~~l~~  194 (241)
T 2c46_A          148 CTHGFNRTGFLICAFLVEKMDWSIEAAVATFAQA-RPPGI-YKGDYLKE  194 (241)
T ss_dssp             CSSSSHHHHHHHHHHHHHTTCCCHHHHHHHHHHH-STTCC-CCHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHHhCCCHHHHHHHHHHH-CCCCC-CCHHHHHH
Confidence            999999999999999997 699999999988876 55443 35566543

>1d5r_A Phosphoinositide phosphotase PTEN; C2 domain, phosphotidylinositol, hydrolase; HET: TLA; 2.10A {Homo sapiens} SCOP: b.7.1.1 c.45.1.1

Probab=99.71  E-value=7.3e-18  Score=146.88  Aligned_cols=135  Identities=27%  Similarity=0.368  Sum_probs=98.2

Q ss_pred             CCCccccccceEecCCCChh-------h----HHHHH--hcCCcEEEEcCCC-CCCCchHHHHhhCCcEEEEeeeCCCCC
Q 028983           54 PLNFSMVDNGIFRSGFPDSA-------N----FSFLQ--TLRLRSIIYLCPE-PYPEANTEFLKSNGIKLFQFAIEGHKE  119 (201)
Q Consensus        54 p~nf~~V~~~Lyrsg~p~~~-------~----l~~L~--~lGIktII~Lr~e-~~~~~~~~~~~~~gi~~~~ipi~d~~~  119 (201)
                      .+++.+|+++|+.++.|...       .    +.+|.  ..+...|+||+.+ .|..      +..+++++++|+.|...
T Consensus        16 ~ldl~~It~~li~~~~P~~~~e~l~r~~i~~Vv~~l~~~~~~~~~v~nl~~e~~y~~------~~~~~~~~~~~~~D~~~   89 (324)
T 1d5r_A           16 DLDLTYIYPNIIAMGFPAERLEGVYRNNIDDVVRFLDSKHKNHYKIYNLCAERHYDT------AKFNCRVAQYPFEDHNP   89 (324)
T ss_dssp             TBSEEEEETTEEEECCCBSSCCTTCCCBHHHHHHHHHHHSSSCEEEEEEESSCCCCT------TSCSSCEEEEEECTTSC
T ss_pred             ccceEEEcCcEEEEeCCCCcchhhhccCHHHHHHHHHhcCCCcEEEEEcCCCCCCCh------HHhCCeEEEEeecCCCC
Confidence            47899999999999999631       1    23333  2466779999765 3321      12367899999999988


Q ss_pred             CCCCCCHHHHHHHHHHHHc----cCCCcEEEEcCCCCChHHHHHHHHHHHCCC--CHHHHHHHHHHHhc--CCC--Cchh
Q 028983          120 PFVNIPEDMIREALKVLLD----VRNHPVLIHCKRGKHRTGCLVGCLRKLQKW--CLSSVFDEYQRFAA--AKA--RVSD  189 (201)
Q Consensus       120 p~~~i~~~~i~~~l~~l~~----~~~~pVLVHC~aG~~RTG~vva~~l~~~g~--s~~~ai~ey~~~~~--~~~--~~~~  189 (201)
                      |.    .+.+.++++.+.+    ..++||+|||++|+||||+++|||++..++  +.++|++.++....  ++.  ...|
T Consensus        90 P~----~~~l~~~~~~i~~~l~~~~~~~VlVHC~aG~gRTGt~ia~yL~~~~~~~~~~eal~~~~~~R~~r~~~v~~~~Q  165 (324)
T 1d5r_A           90 PQ----LELIKPFCEDLDQWLSEDDNHVAAIHCKAGKGRTGVMICAYLLHRGKFLKAQEALDFYGEVRTRDKKGVTIPSQ  165 (324)
T ss_dssp             CC----HHHHHHHHHHHHHHHTTTSCSEEEEECSSSSHHHHHHHHHHHHHHTSCSSHHHHHHHHHHHHCSSSCSSCSHHH
T ss_pred             Cc----HHHHHHHHHHHHHHHHhcCCCeEEEECCCCCChhHHHHHHHHHHhcCCCCHHHHHHHHHHhhccCCCCCCCHHH
Confidence            85    3455555544432    246899999999999999999999998754  89999998876532  222  4589


Q ss_pred             hhhHhhhcc
Q 028983          190 QRGTRILSP  198 (201)
Q Consensus       190 ~~Fie~f~~  198 (201)
                      .+|++.|+.
T Consensus       166 ~~yl~~~~~  174 (324)
T 1d5r_A          166 RRYVYYYSY  174 (324)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            999999864

>3n0a_A Tyrosine-protein phosphatase auxilin; phosphatase-like domain, C2 domain, hydrolase; 2.20A {Bos taurus}

Probab=99.56  E-value=1.2e-14  Score=128.45  Aligned_cols=135  Identities=17%  Similarity=0.224  Sum_probs=97.5

Q ss_pred             CCCccccccceEecCCCChh-----------hHHHHHh--cCCcEEEEcCCCCCCCchHHHHhhCCcEEEEeeeCCCCCC
Q 028983           54 PLNFSMVDNGIFRSGFPDSA-----------NFSFLQT--LRLRSIIYLCPEPYPEANTEFLKSNGIKLFQFAIEGHKEP  120 (201)
Q Consensus        54 p~nf~~V~~~Lyrsg~p~~~-----------~l~~L~~--lGIktII~Lr~e~~~~~~~~~~~~~gi~~~~ipi~d~~~p  120 (201)
                      .+.+.+|+++|...+.|...           -..+|.+  -|--.|+||+...|+..   .+   .-+++++|+.|...|
T Consensus        21 ~LDltyIT~riIam~~P~~~~e~~yrn~i~~v~~~L~~~H~~~y~V~NLse~~Yd~~---~f---~~~V~~~~~pD~~~P   94 (361)
T 3n0a_A           21 DLDFTYVTSRIIVMSFPLDSVDIGFRNQVDDIRSFLDSRHLDHYTVYNLSPKSYRTA---KF---HSRVSECSWPIRQAP   94 (361)
T ss_dssp             SCEEEESSSSEEEEEC------------CHHHHHHHHHHHTTCEEEEECSSSCCGGG---SC---GGGEEECCCCSSSCC
T ss_pred             CccEEEEcCCEEEEECCCCCchhhhcCCHHHHHHHHHHhCCCeEEEEECCCCCCChh---hc---CCcEEEeecCCCCCC
Confidence            56778888888888888642           2356654  37888999987655321   11   236889999999888


Q ss_pred             CCCCCHHHHHHHHHHHH----ccCCCcEEEEcCCCCChHHHHHHHHHHHCCC--CHHHHHHHHHHHhcC-CCCchhhhhH
Q 028983          121 FVNIPEDMIREALKVLL----DVRNHPVLIHCKRGKHRTGCLVGCLRKLQKW--CLSSVFDEYQRFAAA-KARVSDQRGT  193 (201)
Q Consensus       121 ~~~i~~~~i~~~l~~l~----~~~~~pVLVHC~aG~~RTG~vva~~l~~~g~--s~~~ai~ey~~~~~~-~~~~~~~~Fi  193 (201)
                      .    .+.+.++++.+.    ...+++|+|||++|+||||+++||||++.|+  +.++|++.++..... ...++|.+|+
T Consensus        95 ~----l~~l~~~~~~i~~~l~~~~~~~v~VHC~aG~GRtg~~ia~~Li~~~~~~~~~eAl~~~~~~R~~~~~~psQ~ryv  170 (361)
T 3n0a_A           95 S----LHNLFAVCRNMYNWLLQNPKNVCVVHCLDGRAASSILVGAMFIFCNLYSTPGPAVRLLYAKRPGIGLSPSHRRYL  170 (361)
T ss_dssp             C----HHHHHHHHHHHHHHHHHCTTCEEEEEECSCTHHHHHHHHHHHHHTTSCSSHHHHHHHHHHHSTTCCCCHHHHHHH
T ss_pred             C----HHHHHHHHHHHHHHHhcCCCCeEEEEeCCCCccHHHHHHHHHHHhcCCCCHHHHHHHHHHhCCCCCCCHHHHHHH
Confidence            5    455555555543    2356799999999999999999999998865  899999988876332 2246999999


Q ss_pred             hhhcc
Q 028983          194 RILSP  198 (201)
Q Consensus       194 e~f~~  198 (201)
                      +.|.-
T Consensus       171 ~yf~~  175 (361)
T 3n0a_A          171 GYMCD  175 (361)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99863

>3v0d_A Voltage-sensor containing phosphatase; PTP, hydrolase; HET: PO4; 1.10A {Ciona intestinalis} PDB: 3v0f_A* 3v0g_A 3v0h_A* 3awf_A 3v0j_A 3awe_A 3awg_A 3v0e_A 3v0i_A

Probab=99.55  E-value=2.2e-14  Score=125.93  Aligned_cols=134  Identities=21%  Similarity=0.254  Sum_probs=99.0

Q ss_pred             CCccccccceEecCCCChh----------h-HHHHHh--cCCcEEEEcCCCCCCCchHHHHhhCCcEEEEeeeCCCCCCC
Q 028983           55 LNFSMVDNGIFRSGFPDSA----------N-FSFLQT--LRLRSIIYLCPEPYPEANTEFLKSNGIKLFQFAIEGHKEPF  121 (201)
Q Consensus        55 ~nf~~V~~~Lyrsg~p~~~----------~-l~~L~~--lGIktII~Lr~e~~~~~~~~~~~~~gi~~~~ipi~d~~~p~  121 (201)
                      +.+.+|+++|..++.|...          + ..+|.+  -|--.|+||+.+...+. ..    -+.++.++|+.|...|.
T Consensus        25 LDltyIT~riIam~~P~~~~e~~yRn~i~dv~~~L~~~h~~~y~V~NL~sE~~Yd~-~~----f~~~v~~~p~pD~~~P~   99 (339)
T 3v0d_A           25 LDLTYVTDHVIAMSFPSSGRQSLFRNPIGEVSRFFKTKHPDKFRIYNLCSERGYDE-TK----FDNHVYRVMIDDHNVPT   99 (339)
T ss_dssp             EEEEEEETTEEEECCEESSSCCTTSEEHHHHHHHHHHHSTTCEEEEEEETTCCCCG-GG----GTTCEEEEEECTTSCCC
T ss_pred             eeEEEEecCEEEEECCCCCchhhccCCHHHHHHHHHHhCCCceEEEECCCCCCCCh-HH----cCCeEEEeccCCCCCCC
Confidence            5678999999889988532          2 255553  35778999987632211 11    24578899999998885


Q ss_pred             CCCCHHHHHHHHHHHHc----cCCCcEEEEcCCCCChHHHHHHHHHHHCCC--CHHHHHHHHHHHhcC-------CC--C
Q 028983          122 VNIPEDMIREALKVLLD----VRNHPVLIHCKRGKHRTGCLVGCLRKLQKW--CLSSVFDEYQRFAAA-------KA--R  186 (201)
Q Consensus       122 ~~i~~~~i~~~l~~l~~----~~~~pVLVHC~aG~~RTG~vva~~l~~~g~--s~~~ai~ey~~~~~~-------~~--~  186 (201)
                          .+.+.++++.+.+    ..+++|+|||.+|+||||+++||||+..|+  +.++|++.++..+..       ++  .
T Consensus       100 ----~~~l~~~~~~v~~~l~~~~~~~v~vHC~~G~gRtg~~ia~~Li~~~~~~~~~~Al~~~~~~R~~~~~~~~~~~v~~  175 (339)
T 3v0d_A          100 ----LVDLLKFIDDAKVWMTSDPDHVIAIHSKGGKGRTGTLVSSWLLEDGKFDTAKEALEYFGSRRTDFEVGDVFQGVET  175 (339)
T ss_dssp             ----HHHHHHHHHHHHHHHHTCTTCEEEEECSSSSHHHHHHHHHHHHHTTSCSSHHHHHHHHHHHHSSCCTTSCCCCC-C
T ss_pred             ----HHHHHHHHHHHHHHHhcCCCCeEEEEeCCCCcchHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCccccccccccCC
Confidence                4566656555532    245799999999999999999999998865  899999988876432       12  4


Q ss_pred             chhhhhHhhhc
Q 028983          187 VSDQRGTRILS  197 (201)
Q Consensus       187 ~~~~~Fie~f~  197 (201)
                      ++|.+|+..|.
T Consensus       176 psQ~Ryv~yf~  186 (339)
T 3v0d_A          176 ASQIRYVGYFE  186 (339)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            69999999986

>3mmj_A MYO-inositol hexaphosphate phosphohydrolase; phytase, protein tyrosine phosphatase, inositol phosphate, I phosphatase; HET: IHP; 1.60A {Selenomonas ruminantium} SCOP: c.45.1.4 PDB: 1u24_A 1u25_A* 1u26_A* 3o3l_A* 3moz_A* 2pt0_A 2psz_A 3d1h_A 3d1o_A 3d1q_A 2b4u_A 2b4p_A 2b4o_A

Probab=99.41  E-value=1.2e-12  Score=113.39  Aligned_cols=80  Identities=16%  Similarity=0.213  Sum_probs=67.6

Q ss_pred             HHHHhhCCcEEEEeeeCCCCCCCCCCCHHHHHHHHHHHHc-cCCCcEEEEcCCCCChHHHHHHHHHH-H-CCCCHHHHHH
Q 028983           99 TEFLKSNGIKLFQFAIEGHKEPFVNIPEDMIREALKVLLD-VRNHPVLIHCKRGKHRTGCLVGCLRK-L-QKWCLSSVFD  175 (201)
Q Consensus        99 ~~~~~~~gi~~~~ipi~d~~~p~~~i~~~~i~~~l~~l~~-~~~~pVLVHC~aG~~RTG~vva~~l~-~-~g~s~~~ai~  175 (201)
                      .+.++..|++|+++|+.|+..|.    .+.+.++++++.. ..+.+++|||.+|.||||+++++|++ . .+|+.++|++
T Consensus       174 ~e~~~~~Gl~Y~rlPi~D~~aP~----~e~id~fl~~v~~l~~~~~i~vHC~aG~GRTgt~ma~y~ll~~~~vs~eeii~  249 (314)
T 3mmj_A          174 QEVAEAAGMRYFRIAATDHVWPT----PENIDRFLAFYRTLPQDAWLHFHSEAGVGRTTAFMVMTDMLKNPSVSLKDILY  249 (314)
T ss_dssp             HHHHHHTTCEEEEEEECTTSCCC----HHHHHHHHHHHHTCCTTCEEEEECSSSSHHHHHHHHHHHHHHCTTSCHHHHHH
T ss_pred             HHHHHhCCCEEEEeCcCCCCCCC----HHHHHHHHHHHHHcCCCCCEEEECCCCCchHHHHHHHHHHHHCCCCCHHHHHH
Confidence            34567789999999999998885    6788888888765 35689999999999999999999855 3 4999999999


Q ss_pred             HHHHHhc
Q 028983          176 EYQRFAA  182 (201)
Q Consensus       176 ey~~~~~  182 (201)
                      ..+...+
T Consensus       250 r~~~lgg  256 (314)
T 3mmj_A          250 RQHEIGG  256 (314)
T ss_dssp             HHHHTTS
T ss_pred             HHHHhCC
Confidence            8887755

>3f41_A Phytase; tandem repeat, protein tyrosine phosphatase, inositol phosphatase, hydrolase; 2.30A {Mitsuokella multacida}

Probab=99.21  E-value=8.1e-11  Score=109.91  Aligned_cols=79  Identities=16%  Similarity=0.296  Sum_probs=67.9

Q ss_pred             HHHhhCCcEEEEeeeCCCCCCCCCCCHHHHHHHHHHHHc-cCCCcEEEEcCCCCChHHHHHHHHHHH---CCCCHHHHHH
Q 028983          100 EFLKSNGIKLFQFAIEGHKEPFVNIPEDMIREALKVLLD-VRNHPVLIHCKRGKHRTGCLVGCLRKL---QKWCLSSVFD  175 (201)
Q Consensus       100 ~~~~~~gi~~~~ipi~d~~~p~~~i~~~~i~~~l~~l~~-~~~~pVLVHC~aG~~RTG~vva~~l~~---~g~s~~~ai~  175 (201)
                      +.++..|+.|+++|+.|...|.    .+.|.++++++.. ..+.+++|||.+|.||||++++||+++   .+++.++|+.
T Consensus       194 el~~~~Gl~Y~Ripi~D~~~P~----~e~id~fl~~v~~l~~~~~i~vHC~AG~GRTgT~m~~y~m~k~~~~~s~~diI~  269 (629)
T 3f41_A          194 EMVKQHGANYFRLTLQDHFRPD----DPDVDKFLEFYKSLPKDAWLHYHCYAGMGRTTIFMVMHDILKNAKDVSFDDIIQ  269 (629)
T ss_dssp             HHHHTTTCEEEEEEECTTSCCC----HHHHHHHHHHHHTSCTTCEEEEECSSSSHHHHHHHHHHHHHHHTTTSCHHHHHH
T ss_pred             HHHHhCCCeEEEccCCCCCCCC----HHHHHHHHHHHHhcCCCCCEEEECCCCCCHHHHHHHHHHHHhccCCCCHHHHHH
Confidence            4577899999999999998885    6788888888865 356899999999999999999999775   4799999999


Q ss_pred             HHHHHhc
Q 028983          176 EYQRFAA  182 (201)
Q Consensus       176 ey~~~~~  182 (201)
                      ..+...+
T Consensus       270 Rq~~lgg  276 (629)
T 3f41_A          270 RQKLIGI  276 (629)
T ss_dssp             HHHHHSS
T ss_pred             HHHHhcC
Confidence            8887755

>3f41_A Phytase; tandem repeat, protein tyrosine phosphatase, inositol phosphatase, hydrolase; 2.30A {Mitsuokella multacida}

Probab=99.18  E-value=1.1e-10  Score=109.03  Aligned_cols=79  Identities=18%  Similarity=0.311  Sum_probs=67.5

Q ss_pred             HHHhhCCcEEEEeeeCCCCCCCCCCCHHHHHHHHHHHHc-cCCCcEEEEcCCCCChHHHHHHHHHHHC--CCCHHHHHHH
Q 028983          100 EFLKSNGIKLFQFAIEGHKEPFVNIPEDMIREALKVLLD-VRNHPVLIHCKRGKHRTGCLVGCLRKLQ--KWCLSSVFDE  176 (201)
Q Consensus       100 ~~~~~~gi~~~~ipi~d~~~p~~~i~~~~i~~~l~~l~~-~~~~pVLVHC~aG~~RTG~vva~~l~~~--g~s~~~ai~e  176 (201)
                      +.++..|+.|+++|+.|...|.    .+.+.++++++.. ..+++++|||.+|.||||++++||+++.  ++++++|++.
T Consensus       492 e~~~~~Gi~Y~Ripi~D~~aP~----~e~id~fl~~v~~lp~~~~v~vHC~aG~GRTtT~mv~y~m~k~~~~s~~dii~r  567 (629)
T 3f41_A          492 QLVEKNGLHYYRIAATDHIWPS----AANIDEFINFTRTMPANAWLHFHCQAGAGRTTAYMAMYDMMKNPDVSLGDILSR  567 (629)
T ss_dssp             HHHHHTTCEEEEEEECTTSCCC----HHHHHHHHHHHHHSCTTCEEEEECSSSSHHHHHHHHHHHHHHCTTSCHHHHHHH
T ss_pred             HHHHhCCCEEEEeCCCCCCCCC----HHHHHHHHHHHHhcCCCCCEEEeCCCCCchHHHHHHHHHHHHcCCCCHHHHHHH
Confidence            3567899999999999999885    6788888888765 3578999999999999999999997753  8999999998


Q ss_pred             HHHHhc
Q 028983          177 YQRFAA  182 (201)
Q Consensus       177 y~~~~~  182 (201)
                      .....+
T Consensus       568 q~~lgg  573 (629)
T 3f41_A          568 QYLLGG  573 (629)
T ss_dssp             HHHHTS
T ss_pred             HHhhCc
Confidence            887754

>1g4w_R Protein tyrosine phosphatase SPTP; virulence factor, GTPase activating protein, 4-helix bundle, disorder, signaling protein; 2.20A {Salmonella typhimurium} SCOP: a.24.11.1 c.45.1.2 PDB: 1g4u_S

Probab=98.82  E-value=1.3e-08  Score=90.49  Aligned_cols=86  Identities=17%  Similarity=0.208  Sum_probs=59.6

Q ss_pred             cEEEEee-eCCCCCCCCCCCHHHHHHHHHHHHcc-----------CCCcEEEEcCCCCChHHHHHHHHHHHC--CCCHHH
Q 028983          107 IKLFQFA-IEGHKEPFVNIPEDMIREALKVLLDV-----------RNHPVLIHCKRGKHRTGCLVGCLRKLQ--KWCLSS  172 (201)
Q Consensus       107 i~~~~ip-i~d~~~p~~~i~~~~i~~~l~~l~~~-----------~~~pVLVHC~aG~~RTG~vva~~l~~~--g~s~~~  172 (201)
                      |.++|++ +.|++.|.   +.+.+.++++.+...           ..+|++|||.+|.||||++++++++..  .++..+
T Consensus       271 V~h~~y~~WpD~gvP~---~~~~ll~~i~~v~~~~~~~~~~~~~~~~~PivVHCsAGvGRTGtfiaidll~~~~~vdv~~  347 (383)
T 1g4w_R          271 IPVLHVKNWPDHQPLP---STDQLEYLADRVKNSNQNGAPGRSSSDKHLPMIHCLGGVGRTGTMAAALVLKDNPHSNLEQ  347 (383)
T ss_dssp             EEEEEECSCCTTSCCS---SHHHHHHHHHHHHTSCCCCCTTCSCTTSSCCEEESSSSSHHHHHHHHHHHHHHCTTCCHHH
T ss_pred             EEEEeeCCcCCcCCCC---CHHHHHHHHHHHHHHHhhhccccccCCCCCEEEEeCcCCcHHHHHHHHHHHHhCCCCCHHH
Confidence            4455555 56666653   245666677776542           247999999999999999999998754  499999


Q ss_pred             HHHHHHHHhcCC-CCc--hhhhhHhhh
Q 028983          173 VFDEYQRFAAAK-ARV--SDQRGTRIL  196 (201)
Q Consensus       173 ai~ey~~~~~~~-~~~--~~~~Fie~f  196 (201)
                      ++..++.. |++ ...  .|-.|+..+
T Consensus       348 ~v~~lR~q-R~g~~Vqt~~Qy~fl~~~  373 (383)
T 1g4w_R          348 VRADFRDS-RNNRMLEDASQFVQLKAM  373 (383)
T ss_dssp             HHHHHHHH-TCTTTTCCHHHHHHHHHH
T ss_pred             HHHHHHhh-CCCCCCCCHHHHHHHHHH
Confidence            99988876 553 433  344555443

>1fpr_A Protein-tyrosine phosphatase 1C; protein tyrosine phosphatase, substrate specificity, residue shift, signaling protein; HET: PTR; 2.50A {Homo sapiens} SCOP: c.45.1.2 PDB: 1gwz_A

Probab=98.78  E-value=6.7e-09  Score=88.43  Aligned_cols=76  Identities=12%  Similarity=0.131  Sum_probs=50.0

Q ss_pred             eeCCCCCCCCCCCHHHHHHHHHHHHc-----cCCCcEEEEcCCCCChHHHHHHHHHHH-----CC----CCHHHHHHHHH
Q 028983          113 AIEGHKEPFVNIPEDMIREALKVLLD-----VRNHPVLIHCKRGKHRTGCLVGCLRKL-----QK----WCLSSVFDEYQ  178 (201)
Q Consensus       113 pi~d~~~p~~~i~~~~i~~~l~~l~~-----~~~~pVLVHC~aG~~RTG~vva~~l~~-----~g----~s~~~ai~ey~  178 (201)
                      ++.|++.|.   +...+.++++.+..     ..++||+|||++|.||||+++|+++++     .|    ++..+++..++
T Consensus       174 ~WpD~~vP~---~~~~~l~~~~~v~~~~~~~~~~~pivVHCsaGvGRTGtfia~~~~l~~l~~~g~~~~vdv~~~v~~lR  250 (284)
T 1fpr_A          174 SWPDHGVPS---EPGGVLSFLDQINQRQESLPHAGPIIVHSSAGIGRTGTIIVIDMLMENISTKGLDCDIDIQKTIQMVR  250 (284)
T ss_dssp             CSCTTSCCS---CSHHHHHHHHHHHHHHTTSTTCCCEEEESSBSSHHHHHHHHHHHHHHHHHHHCTTSCCCHHHHHHHHH
T ss_pred             CCCCCCCCC---CHHHHHHHHHHHHHHHhhcCCCCcEEEEcCCCCcHHHHHHHHHHHHHHHHhcCCCceecHHHHHHHHH
Confidence            445555553   12444456665532     257999999999999999999987542     35    67889998887


Q ss_pred             HHhcCCCCchhhhh
Q 028983          179 RFAAAKARVSDQRG  192 (201)
Q Consensus       179 ~~~~~~~~~~~~~F  192 (201)
                      .. |+......++|
T Consensus       251 ~q-R~~~Vqt~~Qy  263 (284)
T 1fpr_A          251 AQ-RSGMVQTEAQY  263 (284)
T ss_dssp             TT-STTSSCSSHHH
T ss_pred             hh-CCCCCCCHHHH
Confidence            66 55553333333

>3b7o_A Tyrosine-protein phosphatase non-receptor type 11; SHP2, PTPN11, tyrosine phosphatase, structural genomics, STR genomics consortium, SGC, deafness; 1.60A {Homo sapiens} PDB: 3jrl_A* 3mow_A* 3o5x_A*

Probab=98.72  E-value=3.2e-08  Score=85.66  Aligned_cols=78  Identities=14%  Similarity=0.168  Sum_probs=52.3

Q ss_pred             eeeCCCCCCCCCCCHHHHHHHHHHHHc-----cCCCcEEEEcCCCCChHHHHHHHHHHH-----CC----CCHHHHHHHH
Q 028983          112 FAIEGHKEPFVNIPEDMIREALKVLLD-----VRNHPVLIHCKRGKHRTGCLVGCLRKL-----QK----WCLSSVFDEY  177 (201)
Q Consensus       112 ipi~d~~~p~~~i~~~~i~~~l~~l~~-----~~~~pVLVHC~aG~~RTG~vva~~l~~-----~g----~s~~~ai~ey  177 (201)
                      .++.|.+.|.   +...+.++++.+..     ..++||+|||.+|.||||+++|+++++     .|    ++..+++..+
T Consensus       208 ~~WpD~gvP~---~~~~~l~fl~~v~~~~~~~~~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~g~~~~vdv~~~v~~l  284 (316)
T 3b7o_A          208 RTWPDHGVPS---DPGGVLDFLEEVHHKQESIMDAGPVVVHCSAGIGRTGTFIVIDILIDIIREKGVDCDIDVPKTIQMV  284 (316)
T ss_dssp             CCCCSSSCCS---SSHHHHHHHHHHHHHHHTSTTCCCEEEEESSSSHHHHHHHHHHHHHHHHHHHCTTSCCCHHHHHHHH
T ss_pred             cCcccCCCCC---ChHHHHHHHHHHHHHHhhcCCCCCEEEEcCCCCcHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHH
Confidence            3456666663   12444556665532     257999999999999999999986542     35    6788899888


Q ss_pred             HHHhcCCCCchhhhhH
Q 028983          178 QRFAAAKARVSDQRGT  193 (201)
Q Consensus       178 ~~~~~~~~~~~~~~Fi  193 (201)
                      +.. |+......+||.
T Consensus       285 R~q-R~~~Vqt~~Qy~  299 (316)
T 3b7o_A          285 RSQ-RSGMVQTEAQYR  299 (316)
T ss_dssp             HTT-STTCSCSHHHHH
T ss_pred             HHh-CCCCCCCHHHHH
Confidence            866 555544444443

>2b49_A Protein tyrosine phosphatase, non-receptor type 3; human, STRU genomics, structural genomics consortium, SGC, hydrolase; 1.54A {Homo sapiens}

Probab=98.71  E-value=2.8e-08  Score=84.87  Aligned_cols=77  Identities=22%  Similarity=0.235  Sum_probs=51.3

Q ss_pred             eeCCCCCCCCCCCHHHHHHHHHHHHc--cCCCcEEEEcCCCCChHHHHHHHHHH----HC--CCCHHHHHHHHHHHhcCC
Q 028983          113 AIEGHKEPFVNIPEDMIREALKVLLD--VRNHPVLIHCKRGKHRTGCLVGCLRK----LQ--KWCLSSVFDEYQRFAAAK  184 (201)
Q Consensus       113 pi~d~~~p~~~i~~~~i~~~l~~l~~--~~~~pVLVHC~aG~~RTG~vva~~l~----~~--g~s~~~ai~ey~~~~~~~  184 (201)
                      .+.|++.|.   +.+.+.++++.+..  ..++||+|||++|.||||+++++...    ..  .++..+++...+.. |+.
T Consensus       182 ~WpD~gvP~---~~~~~l~~i~~v~~~~~~~~PivVHCsaGvGRTGtfia~d~~~~~l~~~~~v~~~~~v~~lR~q-R~~  257 (287)
T 2b49_A          182 AWPDHGVPD---DSSDFLEFVNYVRSLRVDSEPVLVHCSAGIGRTGVLVTMETAMCLTERNLPIYPLDIVRKMRDQ-RAM  257 (287)
T ss_dssp             CSCSSSCCS---SCHHHHHHHHHHHHHCCTTCCEEEECSSSSHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHTT-STT
T ss_pred             cCCCCCCCC---CHHHHHHHHHHHHHhccCCCcEEEEcCCCCcHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHh-ccc
Confidence            345555553   12455557776654  24799999999999999999987643    22  47888999877755 555


Q ss_pred             CCchhhhhH
Q 028983          185 ARVSDQRGT  193 (201)
Q Consensus       185 ~~~~~~~Fi  193 (201)
                      .....++|.
T Consensus       258 ~Vqt~~Qy~  266 (287)
T 2b49_A          258 MVQTSSQYK  266 (287)
T ss_dssp             CSCSHHHHH
T ss_pred             ccCCHHHHH
Confidence            544444443

>4az1_A Tyrosine specific protein phosphatase; hydrolase, drug design; 2.18A {Trypanosoma cruzi}

Probab=98.70  E-value=5.6e-08  Score=83.45  Aligned_cols=67  Identities=21%  Similarity=0.284  Sum_probs=48.8

Q ss_pred             HHHHHHHHHHHHcc-CCCcEEEEcCCCCChHHHHHHHHHHH-----CC---CCHHHHHHHHHHHhcCCCCchhhhhH
Q 028983          126 EDMIREALKVLLDV-RNHPVLIHCKRGKHRTGCLVGCLRKL-----QK---WCLSSVFDEYQRFAAAKARVSDQRGT  193 (201)
Q Consensus       126 ~~~i~~~l~~l~~~-~~~pVLVHC~aG~~RTG~vva~~l~~-----~g---~s~~~ai~ey~~~~~~~~~~~~~~Fi  193 (201)
                      ...+.++++.+... ..+||+|||.+|.||||+++|+..++     .+   ++..+++...+.. |+......+||+
T Consensus       203 ~~~~l~~~~~v~~~~~~~PivVHCsaGvGRTGtfiai~~~~~~l~~~~~~~~~v~~~v~~lR~q-R~~~Vqt~~QY~  278 (302)
T 4az1_A          203 ATSLEALLTNVKNSPTTVPVVVHCSAGIGRTGTLIGAYAALTHLERGTLTDTTVYDVVSAMRRQ-RFGMVQRMEQYF  278 (302)
T ss_dssp             HHHHHHHHHHHHHSCTTSCEEEESSSSSSHHHHHHHHHHHHHHHHTTCCCTTHHHHHHHHHHHH-STTCSCSHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCCCEEEECCCCCcHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHhc-CcccCCCHHHHH
Confidence            56666777777553 46999999999999999999987653     13   6678888888766 555543444444

>1wch_A Protein tyrosine phosphatase, non-receptor type 13; hydrolase, phosphate ION, colorectal cancer alternative splicing, coiled coil, cytoskeleton; 1.85A {Homo sapiens} SCOP: c.45.1.2

Probab=98.69  E-value=9.1e-08  Score=82.82  Aligned_cols=76  Identities=17%  Similarity=0.239  Sum_probs=52.0

Q ss_pred             eCCCCCCCCCCCHHHHHHHHHHHHc-cCCCcEEEEcCCCCChHHHHHHHHHHH------CCCCHHHHHHHHHHHhcCCCC
Q 028983          114 IEGHKEPFVNIPEDMIREALKVLLD-VRNHPVLIHCKRGKHRTGCLVGCLRKL------QKWCLSSVFDEYQRFAAAKAR  186 (201)
Q Consensus       114 i~d~~~p~~~i~~~~i~~~l~~l~~-~~~~pVLVHC~aG~~RTG~vva~~l~~------~g~s~~~ai~ey~~~~~~~~~  186 (201)
                      +.|.+.|.   +.+.+.++++.+.. ..++||+|||.+|.||||+++|+..++      ..++..+++..++.. |+...
T Consensus       214 WPD~gvP~---~~~~ll~~i~~v~~~~~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~~~vdv~~~v~~lR~q-R~~~V  289 (315)
T 1wch_A          214 WPDHDTPS---QPDDLLTFISYMRHIHRSGPIITHCSAGIGRSGTLICIDVVLGLISQDLDFDISDLVRCMRLQ-RHGMV  289 (315)
T ss_dssp             CCTTSCCS---CHHHHHHHHHHHHHHCCSSCEEEECSSSSHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHTT-STTCS
T ss_pred             cCCCCCCC---CHHHHHHHHHHHHhhCCCCCEEEEcCCCCcHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHh-CcccC
Confidence            34444442   24566667776654 357999999999999999999987642      257888999988765 55553


Q ss_pred             chhhhhH
Q 028983          187 VSDQRGT  193 (201)
Q Consensus       187 ~~~~~Fi  193 (201)
                      ...++|.
T Consensus       290 qt~~Qy~  296 (315)
T 1wch_A          290 QTEDQYI  296 (315)
T ss_dssp             CSHHHHH
T ss_pred             CCHHHHH
Confidence            3444443

>1p15_A Protein-tyrosine phosphatase alpha; transmembrane, hydrolase, phosphorylation; 2.00A {Mus musculus} SCOP: c.45.1.2

Probab=98.68  E-value=1.9e-08  Score=84.32  Aligned_cols=76  Identities=14%  Similarity=0.142  Sum_probs=49.8

Q ss_pred             eeCCCCCCCCCCCHHHHHHHHHHHHc----cCCCcEEEEcCCCCChHHHHHHHHHHH------CCCCHHHHHHHHHHHhc
Q 028983          113 AIEGHKEPFVNIPEDMIREALKVLLD----VRNHPVLIHCKRGKHRTGCLVGCLRKL------QKWCLSSVFDEYQRFAA  182 (201)
Q Consensus       113 pi~d~~~p~~~i~~~~i~~~l~~l~~----~~~~pVLVHC~aG~~RTG~vva~~l~~------~g~s~~~ai~ey~~~~~  182 (201)
                      .+.|.+.|..   ...+.++++.+..    ..++||+|||.+|.||||+++|+++++      ..++..+++..++.. |
T Consensus       147 ~Wpd~gvP~~---~~~~l~~i~~v~~~~~~~~~~pivVHCsaGvGRTGtfia~~~~~~~l~~~~~vdv~~~v~~lR~q-R  222 (253)
T 1p15_A          147 GWPEVGIPSD---GKGMINIIAAVQKQQQQSGNHPITVHCSAGAGRTGTFCALSTVLERVKAEGILDVFQTVKSLRLQ-R  222 (253)
T ss_dssp             CSCSSSCCSS---SCSHHHHHHHHHHHTTTTTSCCEEEESSSSSHHHHHHHHHHHHHHHHHHHSCCCTTHHHHHHHTT-S
T ss_pred             CCCCCCCCCC---HHHHHHHHHHHHHhhhccCCCCEEEEcCCCCchhHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHh-C
Confidence            3456566631   1233445554432    357999999999999999999987764      257778888888765 5


Q ss_pred             CCCCchhhhh
Q 028983          183 AKARVSDQRG  192 (201)
Q Consensus       183 ~~~~~~~~~F  192 (201)
                      +......+||
T Consensus       223 ~~~Vqt~~Qy  232 (253)
T 1p15_A          223 PHMVQTLEQY  232 (253)
T ss_dssp             TTSSCSTTTT
T ss_pred             ccccCCHHHH
Confidence            5553333333

>3m4u_A Tyrosine specific protein phosphatase, putative; protein tyrosine phosphatase, hydrolase; 2.39A {Trypanosoma brucei}

Probab=98.68  E-value=9.8e-08  Score=82.06  Aligned_cols=67  Identities=22%  Similarity=0.324  Sum_probs=48.0

Q ss_pred             HHHHHHHHHHHHcc-CCCcEEEEcCCCCChHHHHHHHHHHH----C--CCC--HHHHHHHHHHHhcCCCCchhhhhH
Q 028983          126 EDMIREALKVLLDV-RNHPVLIHCKRGKHRTGCLVGCLRKL----Q--KWC--LSSVFDEYQRFAAAKARVSDQRGT  193 (201)
Q Consensus       126 ~~~i~~~l~~l~~~-~~~pVLVHC~aG~~RTG~vva~~l~~----~--g~s--~~~ai~ey~~~~~~~~~~~~~~Fi  193 (201)
                      ...+.++++.+... .++||+|||.+|.||||+++|+..++    .  ..+  ..+++..++.. |+......+||.
T Consensus       206 ~~~~l~~~~~v~~~~~~~PivVHCsaGvGRTGtfiai~~~l~~l~~~~~~d~~v~~~v~~lR~q-R~~~Vqt~~Qy~  281 (306)
T 3m4u_A          206 AASFDELLSVIKNCVTTSPILVHCSAGIGRTGTLIGAYAALLHIERGILTDSTVYSIVAAMKQK-RFGMVQRLEQYA  281 (306)
T ss_dssp             HHHHHHHHHHHHTCCCSSCEEEECSSSSHHHHHHHHHHHHHHHHHTTCCCTTHHHHHHHHHHHH-STTSSCSHHHHH
T ss_pred             HHHHHHHHHHHHhhCCCCCEEEEcCCCCcchheeehHHHHHHHHHcCCCcchHHHHHHHHHHhc-CccccCCHHHHH
Confidence            56677788777653 47999999999999999999877663    2  344  66888888766 555533444444

>1zc0_A Tyrosine-protein phosphatase, non-receptor type 7; heptp, human tyrosine phosphatase catalytic domain, LC-PTP, hydrolase; 1.85A {Homo sapiens} PDB: 2gp0_A 2qdc_A 2hvl_A 2qdp_A 2qdm_A 3o4s_A 3o4t_A* 3o4u_A* 3d44_A* 3d42_A* 2a3k_A

Probab=98.67  E-value=1.1e-07  Score=82.09  Aligned_cols=76  Identities=13%  Similarity=0.229  Sum_probs=52.9

Q ss_pred             eCCCCCCCCCCCHHHHHHHHHHHHc-----cCCCcEEEEcCCCCChHHHHHHHHHHH------CCCCHHHHHHHHHHHhc
Q 028983          114 IEGHKEPFVNIPEDMIREALKVLLD-----VRNHPVLIHCKRGKHRTGCLVGCLRKL------QKWCLSSVFDEYQRFAA  182 (201)
Q Consensus       114 i~d~~~p~~~i~~~~i~~~l~~l~~-----~~~~pVLVHC~aG~~RTG~vva~~l~~------~g~s~~~ai~ey~~~~~  182 (201)
                      +.|.+.|.   +...+.++++.+..     ..++||+|||.+|.||||+++|+++++      ..++..+++..++.. |
T Consensus       204 WpD~gvP~---~~~~ll~~i~~v~~~~~~~~~~~PIvVHCsaGvGRTGtfiai~~~l~~l~~~~~vdv~~~v~~lR~q-R  279 (309)
T 1zc0_A          204 WPDHQTPE---SAGPLLRLVAEVEESPETAAHPGPIVVHCSAGIGRTGCFIATRIGCQQLKARGEVDILGIVCQLRLD-R  279 (309)
T ss_dssp             CCTTSCCS---CHHHHHHHHHHHHTSCCCCSSCCCEEEEESSSSHHHHHHHHHHHHHHHHHHHSEECHHHHHHHHHHH-S
T ss_pred             ccCCCCCC---CHHHHHHHHHHHHHHHhhcCCCCCEEEEeCCCcchhHHHHHHHHHHHHHHhcCcccHHHHHHHHHhh-C
Confidence            34555552   24556667777643     247999999999999999999987653      367888999988876 5


Q ss_pred             CCCCchhhhhH
Q 028983          183 AKARVSDQRGT  193 (201)
Q Consensus       183 ~~~~~~~~~Fi  193 (201)
                      +......+||.
T Consensus       280 ~~~Vqt~~Qy~  290 (309)
T 1zc0_A          280 GGMIQTAEQYQ  290 (309)
T ss_dssp             TTCSCCHHHHH
T ss_pred             CCCCCCHHHHH
Confidence            55533444443

>1jln_A STEP-like ptpase, protein tyrosine phosphatase, receptor type, R; PTP-SL, PTPBR7, ERK2-MAP kinase regulation, hydrolase; 1.81A {Mus musculus} SCOP: c.45.1.2 PDB: 2a8b_A

Probab=98.65  E-value=1e-07  Score=81.81  Aligned_cols=76  Identities=17%  Similarity=0.211  Sum_probs=51.2

Q ss_pred             eCCCCCCCCCCCHHHHHHHHHHHHc-----cCCCcEEEEcCCCCChHHHHHHHHHHH------CCCCHHHHHHHHHHHhc
Q 028983          114 IEGHKEPFVNIPEDMIREALKVLLD-----VRNHPVLIHCKRGKHRTGCLVGCLRKL------QKWCLSSVFDEYQRFAA  182 (201)
Q Consensus       114 i~d~~~p~~~i~~~~i~~~l~~l~~-----~~~~pVLVHC~aG~~RTG~vva~~l~~------~g~s~~~ai~ey~~~~~  182 (201)
                      +.|++.|.   +...+.++++.+..     ..++||+|||.+|.||||+++|+.+++      ..++..+++..++.. |
T Consensus       193 WPD~gvP~---~~~~ll~~i~~v~~~~~~~~~~~PivVHCsaGvGRTGtfia~~~~~~~l~~~~~vdv~~~v~~lR~q-R  268 (297)
T 1jln_A          193 WPDHKTPD---SAQPLLQLMLDVEEDRLASEGRGPVVVHCSAGIGRTGCFIATSIGCQQLKEEGVVDALSIVCQLRVD-R  268 (297)
T ss_dssp             SCTTSSCS---CSHHHHHHHHHHHHHHHTCTTSCCEEEESSSSSHHHHHHHHHHHHHHHHHHHSEECHHHHHHHHHHH-S
T ss_pred             CCCCCCCC---CHHHHHHHHHHHHHHHhhcCCCCCEEEEeCCCchhhHHHHHHHHHHHHHHhcCcccHHHHHHHHHHh-C
Confidence            45666663   12344556665532     357999999999999999999987642      357888999988876 5


Q ss_pred             CCCCchhhhhH
Q 028983          183 AKARVSDQRGT  193 (201)
Q Consensus       183 ~~~~~~~~~Fi  193 (201)
                      +......+||.
T Consensus       269 ~~~Vqt~~Qy~  279 (297)
T 1jln_A          269 GGMVQTSEQYE  279 (297)
T ss_dssp             TTSSCSHHHHH
T ss_pred             cCcCCcHHHHH
Confidence            55533344443

>2hc1_A Receptor-type tyrosine-protein phosphatase beta; protein tyrosine phosphatase, WPD-loop, sulfamic acid, inhibitor, drug design, hydrolase; 1.30A {Homo sapiens} PDB: 2h03_A 2hc2_A 2i4g_A* 2h04_A* 2h02_A 2i3u_A 2i3r_A 2i4e_A* 2i4h_A* 2i5x_A* 2ahs_A

Probab=98.64  E-value=1.3e-07  Score=80.81  Aligned_cols=67  Identities=18%  Similarity=0.306  Sum_probs=46.4

Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHHc-----cCCCcEEEEcCCCCChHHHHHHHHHHH------CCCCHHHHHHHHHHHhcC
Q 028983          115 EGHKEPFVNIPEDMIREALKVLLD-----VRNHPVLIHCKRGKHRTGCLVGCLRKL------QKWCLSSVFDEYQRFAAA  183 (201)
Q Consensus       115 ~d~~~p~~~i~~~~i~~~l~~l~~-----~~~~pVLVHC~aG~~RTG~vva~~l~~------~g~s~~~ai~ey~~~~~~  183 (201)
                      .|++.|.   +...+.++++.+.+     ..++||+|||++|.||||+++|+.+++      ..++..+++..++.. |+
T Consensus       190 PD~gvP~---~~~~ll~~i~~v~~~~~~~~~~~PivVHCsaGvGRTGtfiai~~~l~~l~~~~~vdv~~~v~~lR~q-R~  265 (291)
T 2hc1_A          190 PDHGVPE---TTQSLIQFVRTVRDYINRSPGAGPTVVHCSAGVGRTGTFIALDRILQQLDSKDSVDIYGAVHDLRLH-RV  265 (291)
T ss_dssp             CSSSCCS---CHHHHHHHHHHHHHHHHHSSCCCCEEEECSSSSHHHHHHHHHHHHHHHHHHCC-CCHHHHHHHHHTT-ST
T ss_pred             CCCCCCC---CHHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCCchhHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHh-Cc
Confidence            4555552   23455556655432     357899999999999999999987764      247777888877765 55


Q ss_pred             CC
Q 028983          184 KA  185 (201)
Q Consensus       184 ~~  185 (201)
                      ..
T Consensus       266 ~~  267 (291)
T 2hc1_A          266 HM  267 (291)
T ss_dssp             TS
T ss_pred             cc
Confidence            45

>4grz_A Tyrosine-protein phosphatase non-receptor type 6; phosphatase domain, hydrolase; 1.37A {Homo sapiens} PDB: 4gry_A 4gs0_A* 1gwz_A 1fpr_A*

Probab=98.64  E-value=1.3e-07  Score=80.57  Aligned_cols=66  Identities=11%  Similarity=0.122  Sum_probs=45.9

Q ss_pred             HHHHHHHHHHHc-----cCCCcEEEEcCCCCChHHHHHHHHHHH-----CC----CCHHHHHHHHHHHhcCCCCchhhhh
Q 028983          127 DMIREALKVLLD-----VRNHPVLIHCKRGKHRTGCLVGCLRKL-----QK----WCLSSVFDEYQRFAAAKARVSDQRG  192 (201)
Q Consensus       127 ~~i~~~l~~l~~-----~~~~pVLVHC~aG~~RTG~vva~~l~~-----~g----~s~~~ai~ey~~~~~~~~~~~~~~F  192 (201)
                      ..+.++++.+..     ...+||+|||.+|.||||+++|+.+++     .|    ++..+++..++.. |+......++|
T Consensus       187 ~~~l~~~~~v~~~~~~~~~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~~~~~~vdv~~~v~~lR~q-R~~~Vqt~~Qy  265 (288)
T 4grz_A          187 GGVLSFLDQINQRQESLPHAGPIIVHSSAGIGRTGTIIVIDMLMENISTKGLDCDIDIQKTIQMVRAQ-RSGMVQTEAQY  265 (288)
T ss_dssp             HHHHHHHHHHHHHHHHSTTCCCEEEECSSSSHHHHHHHHHHHHHHHHHHHCTTSCCCHHHHHHHHHTT-STTCSCSHHHH
T ss_pred             HHHHHHHHHHHHHHhhcCCCCcEEEEeCCCCcHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHh-cccccCCHHHH
Confidence            444445555432     257999999999999999999987653     24    7888999888766 55554344444


Q ss_pred             H
Q 028983          193 T  193 (201)
Q Consensus       193 i  193 (201)
                      .
T Consensus       266 ~  266 (288)
T 4grz_A          266 K  266 (288)
T ss_dssp             H
T ss_pred             H
Confidence            3

>2ooq_A Receptor-type tyrosine-protein phosphatase T; protein tyrosine phosphatase, human, structural GE structural genomics consortium, SGC, hydrolase; HET: B3P; 1.80A {Homo sapiens} PDB: 1rpm_A 2c7s_A

Probab=98.64  E-value=6e-08  Score=82.77  Aligned_cols=77  Identities=16%  Similarity=0.214  Sum_probs=52.0

Q ss_pred             eCCCCCCCCCCCHHHHHHHHHHHHc---cCCCcEEEEcCCCCChHHHHHHHHHHH------CCCCHHHHHHHHHHHhcCC
Q 028983          114 IEGHKEPFVNIPEDMIREALKVLLD---VRNHPVLIHCKRGKHRTGCLVGCLRKL------QKWCLSSVFDEYQRFAAAK  184 (201)
Q Consensus       114 i~d~~~p~~~i~~~~i~~~l~~l~~---~~~~pVLVHC~aG~~RTG~vva~~l~~------~g~s~~~ai~ey~~~~~~~  184 (201)
                      +.|++.|.   +...+.++++.+..   ..++||+|||.+|.||||+++|+.+++      ..++..+++..++.. |+.
T Consensus       185 WpD~gvP~---~~~~ll~~i~~v~~~~~~~~~PivVHCsaGvGRTGtfiai~~~l~~l~~~~~vdv~~~v~~lR~q-R~~  260 (286)
T 2ooq_A          185 WPDHGVPC---YATGLLGFVRQVKFLNPPEAGPIVVHCSAGAGRTGCFIAIDTMLDMAENEGVVDIFNCVRELRAQ-RVN  260 (286)
T ss_dssp             CCTTCCCS---CSHHHHHHHHHHHHHSCTTSCCEEEECSSSSHHHHHHHHHHHHHHHHHHHSEECHHHHHHHHHHH-STT
T ss_pred             CCCCCCCC---CHHHHHHHHHHHHHhcCCCCCcEEEEeCCCCcHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHhh-Ccc
Confidence            45555553   12445556666543   257999999999999999999987664      246788888888876 555


Q ss_pred             CCchhhhhHh
Q 028983          185 ARVSDQRGTR  194 (201)
Q Consensus       185 ~~~~~~~Fie  194 (201)
                      .....+||.-
T Consensus       261 ~Vqt~~Qy~f  270 (286)
T 2ooq_A          261 LVQTEEQYVF  270 (286)
T ss_dssp             SSCSHHHHHH
T ss_pred             cCCCHHHHHH
Confidence            5444445443

>2p6x_A Tyrosine-protein phosphatase non-receptor type 22; tyrosine phosphatase, lymphoid phosphatase, PEP, LYP, struct genomics; 1.90A {Homo sapiens} PDB: 3h2x_A 3brh_A 2qct_A* 2qcj_A* 3olr_A* 3omh_A*

Probab=98.63  E-value=1.1e-07  Score=82.19  Aligned_cols=78  Identities=19%  Similarity=0.205  Sum_probs=51.1

Q ss_pred             eCCCCCCCCCCCHHHHHHHHHHHHc---cCCCcEEEEcCCCCChHHHHHHHHHH----HCC-----CCHHHHHHHHHHHh
Q 028983          114 IEGHKEPFVNIPEDMIREALKVLLD---VRNHPVLIHCKRGKHRTGCLVGCLRK----LQK-----WCLSSVFDEYQRFA  181 (201)
Q Consensus       114 i~d~~~p~~~i~~~~i~~~l~~l~~---~~~~pVLVHC~aG~~RTG~vva~~l~----~~g-----~s~~~ai~ey~~~~  181 (201)
                      +.|.+.|.   +.+.+.++++.+..   ..++||+|||++|.||||+++|+...    ..|     ++..+++..++.. 
T Consensus       193 WPD~gvP~---~~~~~l~~i~~v~~~~~~~~~PivVHCsaGvGRTGtfiaid~~~~~l~~~~~~~~~dv~~~v~~lR~q-  268 (309)
T 2p6x_A          193 WPDHDVPS---SIDPILELIWDVRCYQEDDSVPICIHCSAGCGRTGVICAIDYTWMLLKDGIIPENFSVFSLIREMRTQ-  268 (309)
T ss_dssp             CCCTTCGG---GGHHHHHHHHHHHHHCCSCSSCEEEECSSSSSHHHHHHHHHHHHHHHHTTCCCTTCCHHHHHHHHHTT-
T ss_pred             cccCCCCC---CHHHHHHHHHHHHHHhccCCCcEEEEeCCCCcHHHHHHHHHHHHHHHHhCCCCCccCHHHHHHHHHHh-
Confidence            44555552   23445556665543   25799999999999999999997532    234     6788899888866 


Q ss_pred             cCCCCchhhhhHhh
Q 028983          182 AAKARVSDQRGTRI  195 (201)
Q Consensus       182 ~~~~~~~~~~Fie~  195 (201)
                      |+......++|.-.
T Consensus       269 R~~~Vqt~~Qy~fi  282 (309)
T 2p6x_A          269 RPSLVQTQEQYELV  282 (309)
T ss_dssp             STTSSCSHHHHHHH
T ss_pred             CccccCCHHHHHHH
Confidence            55554444555433

>1l8k_A T-cell protein-tyrosine phosphatase; hydrolase; 2.56A {Homo sapiens} SCOP: c.45.1.2

Probab=98.63  E-value=9.5e-08  Score=82.59  Aligned_cols=65  Identities=15%  Similarity=0.196  Sum_probs=45.5

Q ss_pred             HHHHHHHHHHHc-----cCCCcEEEEcCCCCChHHHHHHHHHHH------CCCCHHHHHHHHHHHhcCCCCchhhhh
Q 028983          127 DMIREALKVLLD-----VRNHPVLIHCKRGKHRTGCLVGCLRKL------QKWCLSSVFDEYQRFAAAKARVSDQRG  192 (201)
Q Consensus       127 ~~i~~~l~~l~~-----~~~~pVLVHC~aG~~RTG~vva~~l~~------~g~s~~~ai~ey~~~~~~~~~~~~~~F  192 (201)
                      +.+.++++.+..     ..++||+|||.+|.||||+++++...+      ..++..+++..++.. |+......+||
T Consensus       190 ~~~l~~l~~v~~~~~~~~~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~~~vdv~~~v~~lR~q-R~~~Vqt~~Qy  265 (314)
T 1l8k_A          190 ASFLNFLFKVRESGSLNPDHGPAVIHCSAGIGRSGTFSLVDTCLVLMEKGDDINIKQVLLNMRKY-RMGLIQTPDQL  265 (314)
T ss_dssp             HHHHHHHHHHHHTTTTSTTSCCEEEEESSSSSHHHHHHHHHHHHHHSSSSCCCCHHHHHHHHTTT-BTTCSCSHHHH
T ss_pred             HHHHHHHHHHHHHhhccCCCCcEEEEcCCCCcHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHh-ccccCCCHHHH
Confidence            445556666543     247999999999999999999975432      248899999988766 55453333444

>2cjz_A Human protein tyrosine phosphatase PTPN5; protein phosphatase, STEP, hydrolase; HET: PTR; 1.70A {Homo sapiens} PDB: 2bij_A 2bv5_A*

Probab=98.62  E-value=1.9e-07  Score=80.43  Aligned_cols=67  Identities=10%  Similarity=0.116  Sum_probs=47.5

Q ss_pred             HHHHHHHHHHHHc------cCCCcEEEEcCCCCChHHHHHHHHHHH------CCCCHHHHHHHHHHHhcCCCCchhhhhH
Q 028983          126 EDMIREALKVLLD------VRNHPVLIHCKRGKHRTGCLVGCLRKL------QKWCLSSVFDEYQRFAAAKARVSDQRGT  193 (201)
Q Consensus       126 ~~~i~~~l~~l~~------~~~~pVLVHC~aG~~RTG~vva~~l~~------~g~s~~~ai~ey~~~~~~~~~~~~~~Fi  193 (201)
                      ...+.++++.+..      ..++||+|||.+|.||||+++|+.+.+      ..++..+++..++.. |+......++|.
T Consensus       210 ~~~ll~~i~~v~~~~~~~~~~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~~~vdv~~~v~~lR~q-R~~~Vqt~~QY~  288 (305)
T 2cjz_A          210 APPLLHLVREVEEAAQQEGPHCAPIIVHSSAGIGRTGCFIATSICCQQLRQEGVVDILKTTCQLRQD-RGGMIQTCEQYQ  288 (305)
T ss_dssp             HHHHHHHHHHHHHHHHHTCSSCCCEEEEESSSSHHHHHHHHHHHHHHHHHHHSCBCHHHHHHHHHHH-STTSSCSHHHHH
T ss_pred             HHHHHHHHHHHHHHhhcccCCCCCEEEEeCCCcchhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHh-CcccCCCHHHHH
Confidence            3455556665532      357999999999999999999987652      468888999988876 555543444443

>2oc3_A Tyrosine-protein phosphatase non-receptor type 18; protein tyrosine phosphatase, human, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}

Probab=98.61  E-value=8.2e-08  Score=82.59  Aligned_cols=65  Identities=20%  Similarity=0.260  Sum_probs=45.1

Q ss_pred             HHHHHHHHHHHc---cCCCcEEEEcCCCCChHHHHHHHH----HHHC-----CCCHHHHHHHHHHHhcCCCCchhhhh
Q 028983          127 DMIREALKVLLD---VRNHPVLIHCKRGKHRTGCLVGCL----RKLQ-----KWCLSSVFDEYQRFAAAKARVSDQRG  192 (201)
Q Consensus       127 ~~i~~~l~~l~~---~~~~pVLVHC~aG~~RTG~vva~~----l~~~-----g~s~~~ai~ey~~~~~~~~~~~~~~F  192 (201)
                      +.+.++++.+..   ..++||+|||.+|.||||+++++.    ++..     .++..+++...+.. |+......++|
T Consensus       209 ~~~l~~i~~v~~~~~~~~~PivVHCsaGvGRTGtfiaid~~~~~ll~~~~~~~vdv~~~v~~lR~q-R~~~Vqt~~Qy  285 (303)
T 2oc3_A          209 DHMLAMVEEARRLQGSGPEPLCVHCSAGCGRTGVLCTVDYVRQLLLTQMIPPDFSLFDVVLKMRKQ-RPAAVQTEEQY  285 (303)
T ss_dssp             HHHHHHHHHHHHHHCSSCCCEEEECSSSSHHHHHHHHHHHHHHHHHTTCCCTTCCHHHHHHHHHTT-STTSSCSHHHH
T ss_pred             HHHHHHHHHHHHHhcCCCCcEEEEECCCCcceeEEEeHHHHHHHHHhcccCCCcCHHHHHHHHHhh-ccccCCCHHHH
Confidence            444456555532   357899999999999999999987    4442     46788888888765 55453333444

>2cm2_A Tyrosine-protein phosphatase non-receptor type 1; polymorphism, phosphorylation, endoplasmic reticulum, oxidation, hydrolase, acetylation; 1.5A {Homo sapiens} SCOP: c.45.1.2 PDB: 2cm3_A 2cmb_A* 2cmc_A* 2cne_A* 3a5j_A 2cma_A 3a5k_A 3eu0_A 3sme_A 2azr_A* 2b07_A* 2h4g_A* 2h4k_A* 2hb1_A* 2qbp_A* 2qbq_A* 2qbr_A* 2qbs_A* 2zmm_A* 2zn7_A* ...

Probab=98.59  E-value=1.4e-07  Score=81.22  Aligned_cols=65  Identities=17%  Similarity=0.200  Sum_probs=44.4

Q ss_pred             HHHHHHHHHHHc-----cCCCcEEEEcCCCCChHHHHHHHHH----HH-C----CCCHHHHHHHHHHHhcCCCCchhhhh
Q 028983          127 DMIREALKVLLD-----VRNHPVLIHCKRGKHRTGCLVGCLR----KL-Q----KWCLSSVFDEYQRFAAAKARVSDQRG  192 (201)
Q Consensus       127 ~~i~~~l~~l~~-----~~~~pVLVHC~aG~~RTG~vva~~l----~~-~----g~s~~~ai~ey~~~~~~~~~~~~~~F  192 (201)
                      ..+.++++.+..     ..++||+|||.+|.||||+++++..    +. .    .++..+++..++.. |+......++|
T Consensus       195 ~~~l~~l~~v~~~~~~~~~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~~~~~~vdv~~~v~~lR~q-R~~~Vqt~~Qy  273 (304)
T 2cm2_A          195 ASFLNFLFKVRESGSLSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKRKDPSSVDIKKVLLEMRKF-RMGLIQTADQL  273 (304)
T ss_dssp             HHHHHHHHHHHHHTTTSTTSBCEEEESSSSSSHHHHHHHHHHHHHHHHHSSCGGGCCHHHHHHHHTTT-STTCSCSHHHH
T ss_pred             HHHHHHHHHHHHHhhccCCCCcEEEEcCcCCchhhHHHHHHHHHHHHHhcCCCcccCHHHHHHHHHHh-cccccCCHHHH
Confidence            445556665543     2478999999999999999998742    22 2    37888999887755 55553344444

>2i75_A Tyrosine-protein phosphatase non-receptor type 4; PTPN4, PTP, tyrosine phosphatase, MEG-1, structural genomics structural genomics consortium, SGC; 2.45A {Homo sapiens}

Probab=98.59  E-value=1.8e-07  Score=81.20  Aligned_cols=77  Identities=17%  Similarity=0.158  Sum_probs=49.9

Q ss_pred             eeCCCCCCCCCCCHHHHHHHHHHHHc---cCCCcEEEEcCCCCChHHHHHHHHHH----HC--CCCHHHHHHHHHHHhcC
Q 028983          113 AIEGHKEPFVNIPEDMIREALKVLLD---VRNHPVLIHCKRGKHRTGCLVGCLRK----LQ--KWCLSSVFDEYQRFAAA  183 (201)
Q Consensus       113 pi~d~~~p~~~i~~~~i~~~l~~l~~---~~~~pVLVHC~aG~~RTG~vva~~l~----~~--g~s~~~ai~ey~~~~~~  183 (201)
                      .+.|++.|.   +...+.++++.+..   ..++||+|||.+|.||||+++++...    ..  .++..+++..++.. |+
T Consensus       209 ~WPD~gvP~---~~~~~l~~i~~v~~~~~~~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~~~v~~~~~v~~lR~q-R~  284 (320)
T 2i75_A          209 AWPDHGVPD---DSSDFLDFVCHVRNKRAGKEEPVVVHCSAGIGRTGVLITMETAMCLIECNQPVYPLDIVRTMRDQ-RA  284 (320)
T ss_dssp             CCCSSSSCS---CTHHHHHHHHHHHHHHTTCCSCEEEECSSSSSHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHTT-ST
T ss_pred             CCCCCCCCC---chHHHHHHHHHHHHHhccCCCCEEEEcCCCCcHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHh-Cc
Confidence            345555552   22455556666543   24799999999999999999986432    22  47788999877755 55


Q ss_pred             CCCchhhhhH
Q 028983          184 KARVSDQRGT  193 (201)
Q Consensus       184 ~~~~~~~~Fi  193 (201)
                      ......++|.
T Consensus       285 ~~Vqt~~Qy~  294 (320)
T 2i75_A          285 MMIQTPSQYR  294 (320)
T ss_dssp             TCSCSHHHHH
T ss_pred             CCCCCHHHHH
Confidence            5533344443

>2bzl_A Tyrosine-protein phosphatase, non-receptor type 14; PTPN14, hydrolase; 1.65A {Homo sapiens}

Probab=98.58  E-value=3.5e-07  Score=79.39  Aligned_cols=53  Identities=19%  Similarity=0.251  Sum_probs=40.5

Q ss_pred             CCCcEEEEcCCCCChHHHHHHHHHHH------CCCCHHHHHHHHHHHhcCCCCchhhhhH
Q 028983          140 RNHPVLIHCKRGKHRTGCLVGCLRKL------QKWCLSSVFDEYQRFAAAKARVSDQRGT  193 (201)
Q Consensus       140 ~~~pVLVHC~aG~~RTG~vva~~l~~------~g~s~~~ai~ey~~~~~~~~~~~~~~Fi  193 (201)
                      .++||+|||++|.||||+++|+..++      ..++..+++..++.. |+......+||.
T Consensus       251 ~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~~~vdv~~~v~~lR~q-R~~~Vqt~~QY~  309 (325)
T 2bzl_A          251 RHPPIVVHCSAGVGRTGVLILSELMIYCLEHNEKVEVPMMLRLLREQ-RMFMIQTIAQYK  309 (325)
T ss_dssp             CCCCEEEESSSSSHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHTT-STTCSCSHHHHH
T ss_pred             CCCCEEEEeCCCCcHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHh-cccCCCCHHHHH
Confidence            47999999999999999999987763      357888999888865 554533444544

>1yfo_A D1, receptor protein tyrosine phosphatase alpha; hydrolase, signal transduction, glycoprotein, phosphorylation, signal; 2.25A {Mus musculus} SCOP: c.45.1.2

Probab=98.57  E-value=6.3e-08  Score=83.26  Aligned_cols=76  Identities=18%  Similarity=0.176  Sum_probs=50.9

Q ss_pred             eCCCCCCCCCCCHHHHHHHHHHHHc---cCCCcEEEEcCCCCChHHHHHHHHHHH------CCCCHHHHHHHHHHHhcCC
Q 028983          114 IEGHKEPFVNIPEDMIREALKVLLD---VRNHPVLIHCKRGKHRTGCLVGCLRKL------QKWCLSSVFDEYQRFAAAK  184 (201)
Q Consensus       114 i~d~~~p~~~i~~~~i~~~l~~l~~---~~~~pVLVHC~aG~~RTG~vva~~l~~------~g~s~~~ai~ey~~~~~~~  184 (201)
                      +.|++.|.   +...+.++++.+..   ..++||+|||.+|.||||+++++..++      ..++..+++..++.. |+.
T Consensus       198 WpD~gvP~---~~~~~l~~i~~v~~~~~~~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~~~vdv~~~v~~lR~q-R~~  273 (302)
T 1yfo_A          198 WPDFGVPF---TPIGMLKFLKKVKACNPQYAGAIVVHCSAGVGRTGTFVVIDAMLDMMHSERKVDVYGFVSRIRAQ-RCQ  273 (302)
T ss_dssp             CCSSSCCS---CSHHHHHHHHHHHHHSCTTSCCEEEECSSSSHHHHHHHHHHHHHHHHHHSSEECHHHHHHHHTTT-STT
T ss_pred             cCCCCcCC---CHHHHHHHHHHHHHhccCCCCCEEEECCCCCcHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHh-ccc
Confidence            44555553   12445556666543   347999999999999999999976653      257888898887765 555


Q ss_pred             CCchhhhhH
Q 028983          185 ARVSDQRGT  193 (201)
Q Consensus       185 ~~~~~~~Fi  193 (201)
                      .....+||.
T Consensus       274 ~Vqt~~Qy~  282 (302)
T 1yfo_A          274 MVQTDMQYV  282 (302)
T ss_dssp             SSCSHHHHH
T ss_pred             cCCCHHHHH
Confidence            533444443

>2i1y_A Receptor-type tyrosine-protein phosphatase; receptor-type protein tyrosine phosphatase precursor, phosph structural genomics, PSI; 2.23A {Homo sapiens} PDB: 2qep_A

Probab=98.57  E-value=1.7e-07  Score=80.51  Aligned_cols=66  Identities=15%  Similarity=0.214  Sum_probs=46.8

Q ss_pred             HHHHHHHHHHHc---cCCCcEEEEcCCCCChHHHHHHHHHHH----C---CCCHHHHHHHHHHHhcCCCCchhhhhH
Q 028983          127 DMIREALKVLLD---VRNHPVLIHCKRGKHRTGCLVGCLRKL----Q---KWCLSSVFDEYQRFAAAKARVSDQRGT  193 (201)
Q Consensus       127 ~~i~~~l~~l~~---~~~~pVLVHC~aG~~RTG~vva~~l~~----~---g~s~~~ai~ey~~~~~~~~~~~~~~Fi  193 (201)
                      ..+.++++.+..   ..++||+|||.+|.||||+++|+.+++    .   .++..+++...+.. |+......++|.
T Consensus       207 ~~ll~~~~~v~~~~~~~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~~~~vdv~~~v~~lR~q-R~~~Vqt~~QY~  282 (301)
T 2i1y_A          207 RPLLDFRRKVNKCYRGRSCPIIVHCSDGAGRTGTYILIDMVLNRMAKGVKEIDIAATLEHVRDQ-RPGLVRSKDQFE  282 (301)
T ss_dssp             HHHHHHHHHHHHSCCCSSCCEEEECSSSSHHHHHHHHHHHHHHHHHTTCSCCCHHHHHHHHHTT-STTCSCSHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCCCCEEEEECCCCchhHHHHHHHHHHHHHHhcCCCcCHHHHHHHHHHh-CccccCCHHHHH
Confidence            455557666643   246899999999999999999986542    2   37888999888765 555544445544

>3s3e_A Tyrosine-protein phosphatase 10D; differentiation, neurogenesis, signal transduction, developm protein, hydrolase; 2.40A {Drosophila melanogaster} PDB: 3s3f_A 3s3h_A* 3s3k_A*

Probab=98.54  E-value=2.6e-07  Score=79.66  Aligned_cols=66  Identities=15%  Similarity=0.270  Sum_probs=46.9

Q ss_pred             HHHHHHHHHHHc---cCCCcEEEEcCCCCChHHHHHHHHHHH------CCCCHHHHHHHHHHHhcCCCCchhhhhH
Q 028983          127 DMIREALKVLLD---VRNHPVLIHCKRGKHRTGCLVGCLRKL------QKWCLSSVFDEYQRFAAAKARVSDQRGT  193 (201)
Q Consensus       127 ~~i~~~l~~l~~---~~~~pVLVHC~aG~~RTG~vva~~l~~------~g~s~~~ai~ey~~~~~~~~~~~~~~Fi  193 (201)
                      ..+.++++.+..   ...+||+|||++|.||||+++|+..++      ..++..+++..++.- |+......+||+
T Consensus       218 ~~ll~fi~~v~~~~~~~~~PIvVHCsaGvGRTGtfiaid~~l~~l~~~~~vdv~~~V~~lR~q-R~~mVqt~~QY~  292 (307)
T 3s3e_A          218 QTLVRFVRAFRDRIGAEQRPIVVHCSAGVGRSGTFITLDRILQQINTSDYVDIFGIVYAMRKE-RVWMVQTEQQYI  292 (307)
T ss_dssp             HHHHHHHHHHHHHHCSCCSCEEEECSSSSHHHHHHHHHHHHHHHTTTCSEECHHHHHHHHHHH-STTSSCCHHHHH
T ss_pred             HHHHHHHHHHHHHhcCCCCCEEEEcCCCchHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHhh-CCCCcCCHHHHH
Confidence            445556665543   357899999999999999999977764      245677888887766 555544556664

>2gjt_A Receptor-type tyrosine-protein phosphatase PTPro; tyrosine phosphatase, glepp1, PTPU2, structural genom structural genomics consortium, SGC; 2.15A {Homo sapiens} PDB: 2g59_A 2pi7_A

Probab=98.52  E-value=1.9e-07  Score=79.91  Aligned_cols=78  Identities=21%  Similarity=0.333  Sum_probs=48.9

Q ss_pred             eeCCCCCCCCCCCHHHHHHHHHHHHc---cCCCcEEEEcCCCCChHHHHHHHHHHH------CCCCHHHHHHHHHHHhcC
Q 028983          113 AIEGHKEPFVNIPEDMIREALKVLLD---VRNHPVLIHCKRGKHRTGCLVGCLRKL------QKWCLSSVFDEYQRFAAA  183 (201)
Q Consensus       113 pi~d~~~p~~~i~~~~i~~~l~~l~~---~~~~pVLVHC~aG~~RTG~vva~~l~~------~g~s~~~ai~ey~~~~~~  183 (201)
                      .+.|++.|... ..+.+.++++.+..   ..++||+|||.+|.||||+++|+..++      ..++..+++..++.. |+
T Consensus       186 ~WPD~gvP~~~-~~~~~l~~i~~v~~~~~~~~~PivVHCsaGvGRTGtfiaid~ll~~l~~~~~vdv~~~v~~lR~q-R~  263 (295)
T 2gjt_A          186 AWPDHGVPTAN-AAESILQFVHMVRQQATKSKGPMIIHCSAGVGRTGTFIALDRLLQHIRDHEFVDILGLVSEMRSY-RM  263 (295)
T ss_dssp             CCCCSSSCCHH-HHHHHHHHHHHHHHHHHHCCSCEEEESSSSSHHHHHHHHHHHHHHHHHHCSEECHHHHHHHHHTT-ST
T ss_pred             CCCCCCCCCcc-cHHHHHHHHHHHHHhhccCCCcEEEEECCCCccchHHHHHHHHHHHHHhcCCCCHHHHHHHHHhh-cc
Confidence            44565556310 01244445554432   368999999999999999999874332      246788888887765 55


Q ss_pred             CCCchhhhh
Q 028983          184 KARVSDQRG  192 (201)
Q Consensus       184 ~~~~~~~~F  192 (201)
                      ......+||
T Consensus       264 ~~Vqt~~Qy  272 (295)
T 2gjt_A          264 SMVQTEEQY  272 (295)
T ss_dssp             TSSCSHHHH
T ss_pred             ccCCCHHHH
Confidence            453334444

>2h4v_A Receptor-type tyrosine-protein phosphatase gamma; tyrosine receptor phosphatase, human, structural GENO structural genomics consortium, SGC; HET: FLC; 1.55A {Homo sapiens} PDB: 3qcd_A 3qcc_A 3qcb_A 3qce_A* 3qcf_A* 3qcg_A* 3qch_A* 3qci_A* 3qcj_A* 3qck_A* 2pbn_A 2hy3_A 3qcm_A* 3qcl_A* 3qcn_A

Probab=98.52  E-value=1.4e-07  Score=81.79  Aligned_cols=78  Identities=14%  Similarity=0.086  Sum_probs=51.2

Q ss_pred             eeCCCCCCCCCCCHHHHHHHHHHHHc---cCCCcEEEEcCCCCChHHHHHHHHHHH------CCCCHHHHHHHHHHHhcC
Q 028983          113 AIEGHKEPFVNIPEDMIREALKVLLD---VRNHPVLIHCKRGKHRTGCLVGCLRKL------QKWCLSSVFDEYQRFAAA  183 (201)
Q Consensus       113 pi~d~~~p~~~i~~~~i~~~l~~l~~---~~~~pVLVHC~aG~~RTG~vva~~l~~------~g~s~~~ai~ey~~~~~~  183 (201)
                      .+.|.+.|.   ....+.++++.+..   ...+||+|||.+|.||||+++|+.+++      ..++..+++..++.. |+
T Consensus       218 ~WPD~gvP~---~~~~~l~~i~~~~~~~~~~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~~~vdv~~~v~~lR~q-R~  293 (320)
T 2h4v_A          218 QWPDMGVPE---YALPVLTFVRRSSAARMPETGPVLVHCSAGVGRTGTYIVIDSMLQQIKDKSTVNVLGFLKHIRTQ-RN  293 (320)
T ss_dssp             CCCSSSSCS---CSHHHHHHHHHHHHTCCTTCCCEEEESSSSSHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHTTT-ST
T ss_pred             CCCcCCCCC---CHHHHHHHHHHHHhhccCCCCCEEEECCCCCcHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHh-Cc
Confidence            345555553   12334446555432   246999999999999999999987664      257788888877755 55


Q ss_pred             CCCchhhhhHh
Q 028983          184 KARVSDQRGTR  194 (201)
Q Consensus       184 ~~~~~~~~Fie  194 (201)
                      ......+||+-
T Consensus       294 ~~Vqt~~QY~F  304 (320)
T 2h4v_A          294 YLVQTEEQYIF  304 (320)
T ss_dssp             TSSCSHHHHHH
T ss_pred             ccCCcHHHHHH
Confidence            55444455543

>4i8n_A Tyrosine-protein phosphatase non-receptor type 1; PTP1B, hydrolase-hydrolase inhibitor CO; HET: 1CG; 2.50A {Homo sapiens}

Probab=98.50  E-value=3.3e-07  Score=80.48  Aligned_cols=68  Identities=16%  Similarity=0.196  Sum_probs=46.8

Q ss_pred             HHHHHHHHHHHHcc-----CCCcEEEEcCCCCChHHHHHHHHHH---H------CCCCHHHHHHHHHHHhcCCCCchhhh
Q 028983          126 EDMIREALKVLLDV-----RNHPVLIHCKRGKHRTGCLVGCLRK---L------QKWCLSSVFDEYQRFAAAKARVSDQR  191 (201)
Q Consensus       126 ~~~i~~~l~~l~~~-----~~~pVLVHC~aG~~RTG~vva~~l~---~------~g~s~~~ai~ey~~~~~~~~~~~~~~  191 (201)
                      ...+.+++..+...     ..+||+|||.+|.||||+++++...   +      ..++..+++..++.. |+......+|
T Consensus       222 ~~~~l~~l~~v~~~~~~~~~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~~~~~~vdv~~~V~~lR~q-R~~mVqt~~Q  300 (354)
T 4i8n_A          222 PASFLNFLFKVRESGSLSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKRKDPSSVDIKKVLLEMRKF-RMGLIQTADQ  300 (354)
T ss_dssp             HHHHHHHHHHHHHTTTTCTTSCCEEEECSSSSHHHHHHHHHHHHHHHHHHHTCGGGCCHHHHHHHHHTT-STTCSCSHHH
T ss_pred             HHHHHHHHHHHHHHhhccCCCCCEEEEeCCCcchHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHh-CcccccCHHH
Confidence            45556676666432     4689999999999999999886532   1      157788888888866 5555444555


Q ss_pred             hHh
Q 028983          192 GTR  194 (201)
Q Consensus       192 Fie  194 (201)
                      |.=
T Consensus       301 Y~F  303 (354)
T 4i8n_A          301 LRF  303 (354)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            543

>3i36_A Vascular protein tyrosine phosphatase 1; PTP, hydrolase; 1.84A {Rattus norvegicus} PDB: 2nz6_A 2cfv_A

Probab=98.47  E-value=3.2e-07  Score=80.23  Aligned_cols=76  Identities=17%  Similarity=0.273  Sum_probs=49.3

Q ss_pred             eCCCCCCCCCCCHHHHHHHHHHHHc-----cCCCcEEEEcCCCCChHHHHHHHHHHH------CCCCHHHHHHHHHHHhc
Q 028983          114 IEGHKEPFVNIPEDMIREALKVLLD-----VRNHPVLIHCKRGKHRTGCLVGCLRKL------QKWCLSSVFDEYQRFAA  182 (201)
Q Consensus       114 i~d~~~p~~~i~~~~i~~~l~~l~~-----~~~~pVLVHC~aG~~RTG~vva~~l~~------~g~s~~~ai~ey~~~~~  182 (201)
                      +.|++.|.   +.+.+..++..+..     ..++||+|||++|.||||+++|+..++      ..++..+++..++.. |
T Consensus       208 WPD~gvP~---~~~~ll~f~~~v~~~~~~~~~~~PiVVHCSAGvGRTGtfiaid~~l~~l~~~~~vdv~~~V~~lR~q-R  283 (342)
T 3i36_A          208 WPDHGVPD---TTDLLINFRYLVRDYMKQIPPESPILVHCSAGVGRTGTFIAIDRLIYQIENENTVDVYGIVYDLRMH-R  283 (342)
T ss_dssp             SCSSSSCS---CSHHHHHHHHHHHHHHTTSCSSCCEEEESSSSSHHHHHHHHHHHHHHHHHHHSEECHHHHHHHHHTT-S
T ss_pred             cCcCCCCC---CHHHHHHHHHHHHHHHHhCCCCCCEEEEcCCCChHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHh-C
Confidence            34555553   22344445444432     247899999999999999999976553      357788888887766 5


Q ss_pred             CCCCchhhhhH
Q 028983          183 AKARVSDQRGT  193 (201)
Q Consensus       183 ~~~~~~~~~Fi  193 (201)
                      +......+||+
T Consensus       284 ~~mVqt~~QY~  294 (342)
T 3i36_A          284 PLMVQTEDQYV  294 (342)
T ss_dssp             TTSSCSHHHHH
T ss_pred             ccccCCHHHHH
Confidence            54533444544

>1ygr_A CD45 protein tyrosine phosphatase; protein tyrosine phosphatase, RPTP, LCA, lymphocyte activation, hydrolase; HET: PTR; 2.90A {Homo sapiens} PDB: 1ygu_A*

Probab=98.44  E-value=1.3e-06  Score=81.51  Aligned_cols=76  Identities=17%  Similarity=0.259  Sum_probs=52.5

Q ss_pred             eCCCCCCCCCCCHHHHHHHHHHHHcc-------------CCCcEEEEcCCCCChHHHHHHHHHHH------CCCCHHHHH
Q 028983          114 IEGHKEPFVNIPEDMIREALKVLLDV-------------RNHPVLIHCKRGKHRTGCLVGCLRKL------QKWCLSSVF  174 (201)
Q Consensus       114 i~d~~~p~~~i~~~~i~~~l~~l~~~-------------~~~pVLVHC~aG~~RTG~vva~~l~~------~g~s~~~ai  174 (201)
                      +.|++.|.   +...+.++++.+...             .++||+|||++|.||||+++|+..++      ..++..+++
T Consensus       502 WPd~gvP~---~~~~ll~~i~~v~~~~~~~~~~~~~~~~~~~PivVHCsaGvGRTGtf~ai~~~l~~~~~~~~vdv~~~V  578 (610)
T 1ygr_A          502 WSVEQLPA---EPKELISMIQVVKQKLPQKNSSEGNKHHKSTPLLIHCRDGSQQTGIFCALLNLLESAETEEVVDIFQVV  578 (610)
T ss_dssp             CCSSSCCS---CHHHHHHHHHHHHTTSCCCC-------CCCCCEEEEESSSSTTHHHHHHHHHHHHHHHHSSBCCHHHHH
T ss_pred             CCCCCCCC---CHHHHHHHHHHHHHHhhhhccccccccCCCCCEEEEeCCCCcchhHHHHHHHHHHHHhhCCccCHHHHH
Confidence            44445552   345666677766431             36899999999999999999987653      247888999


Q ss_pred             HHHHHHhcCCCCchhhhhH
Q 028983          175 DEYQRFAAAKARVSDQRGT  193 (201)
Q Consensus       175 ~ey~~~~~~~~~~~~~~Fi  193 (201)
                      ..++.. |+......++|.
T Consensus       579 ~~lR~q-R~~~Vqt~~QY~  596 (610)
T 1ygr_A          579 KALRKA-RLGMVSTFEQYQ  596 (610)
T ss_dssp             HHHHHH-STTTTCSHHHHH
T ss_pred             HHHHHh-CccccCCHHHHH
Confidence            988876 555544444544

>2b3o_A Tyrosine-protein phosphatase, non-receptor type 6; protein tyrosine phosphatase, SHP-1, signaling, hydrolase; 2.80A {Homo sapiens} PDB: 1x6c_A 2rmx_A* 2yu7_A*

Probab=98.41  E-value=1.1e-06  Score=80.80  Aligned_cols=65  Identities=12%  Similarity=0.181  Sum_probs=45.4

Q ss_pred             HHHHHHHHHHHc-----cCCCcEEEEcCCCCChHHHHHHHHHHH-----CC----CCHHHHHHHHHHHhcCCCCchhhhh
Q 028983          127 DMIREALKVLLD-----VRNHPVLIHCKRGKHRTGCLVGCLRKL-----QK----WCLSSVFDEYQRFAAAKARVSDQRG  192 (201)
Q Consensus       127 ~~i~~~l~~l~~-----~~~~pVLVHC~aG~~RTG~vva~~l~~-----~g----~s~~~ai~ey~~~~~~~~~~~~~~F  192 (201)
                      ..+.++++.+..     ..++||+|||.+|.||||+++|+.+++     .|    ++..+++..++.. |+......++|
T Consensus       427 ~~~l~~~~~v~~~~~~~~~~~PivVHCsaG~GRTGtfia~d~~~~~l~~~~~~~~vdv~~~v~~lR~q-R~~~Vqt~~Qy  505 (532)
T 2b3o_A          427 GGVLSFLDQINQRQESLPHAGPIIVHCSAGIGRTGTIIVIDMLMENISTKGLDCDIDIQKTIQMVRAQ-RSGMVQTEAQY  505 (532)
T ss_dssp             HHHHHHHHHHHHHHHHSTTCCCEEEECSSSSSHHHHHHHHHHHHHHHHHSCTTSCCCHHHHHHHHTTT-STTSSCSHHHH
T ss_pred             HHHHHHHHHHHHHHhhcCCCCCEEEEcCCCCchhHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHhh-CcccCCCHHHH
Confidence            445556665532     257999999999999999999986653     24    7788888877766 55453344444

>1lyv_A Protein-tyrosine phosphatase YOPH; toxin, hydrolase; 1.36A {Yersinia enterocolitica} SCOP: c.45.1.2 PDB: 1qz0_A* 1ytn_A 1ytw_A 2i42_A 2y2f_A* 2ydu_A* 1xxp_A* 3blu_A* 1ypt_A* 3blt_A* 1xxv_A* 3f9b_A 3f9a_A 3f99_A 3bm8_A* 1pa9_A* 1yts_A

Probab=98.41  E-value=8.9e-07  Score=76.16  Aligned_cols=55  Identities=15%  Similarity=0.198  Sum_probs=41.8

Q ss_pred             CCCcEEEEcCCCCChHHHHHHHHHHHC----CCCHHHHHHHHHHHhcCC-CCchhhhhHhh
Q 028983          140 RNHPVLIHCKRGKHRTGCLVGCLRKLQ----KWCLSSVFDEYQRFAAAK-ARVSDQRGTRI  195 (201)
Q Consensus       140 ~~~pVLVHC~aG~~RTG~vva~~l~~~----g~s~~~ai~ey~~~~~~~-~~~~~~~Fie~  195 (201)
                      ..+|++|||++|.||||+++++..++.    .++..+++..++.- |+. .....+||.-.
T Consensus       233 ~~~piVVHCSAGvGRTGtfiaid~ll~~~~~~vdv~~~V~~lR~q-R~~~mVQt~~QY~fi  292 (306)
T 1lyv_A          233 SKLRPVIHSRAGVGRTAQLIGAMCMNDSRNSQLSVEDMVSQMRVQ-RNGIMVQKDEQLDVL  292 (306)
T ss_dssp             TSSCCEEECSSSSSHHHHHHHHHHHTCGGGTTCCHHHHHHHHHHH-TCTTSSCSHHHHHHH
T ss_pred             CCCCcEEEcCCCCchhHHHHHHHHHHHhhcCCCCHHHHHHHHHhc-CCcCcCCCHHHHHHH
Confidence            357899999999999999999877643    68899999988876 554 43445555433

>4ge6_A Tyrosine-protein phosphatase non-receptor type 9; hydrolase-hydrolase inhibitor complex; HET: B26; 1.40A {Homo sapiens} PDB: 4ge2_A* 4ge5_A* 2pa5_A*

Probab=98.40  E-value=7.1e-07  Score=77.10  Aligned_cols=53  Identities=17%  Similarity=0.193  Sum_probs=38.6

Q ss_pred             CCcEEEEcCCCCChHHHHHHHHHHH------CCCCHHHHHHHHHHHhcCCCCchhhhhHh
Q 028983          141 NHPVLIHCKRGKHRTGCLVGCLRKL------QKWCLSSVFDEYQRFAAAKARVSDQRGTR  194 (201)
Q Consensus       141 ~~pVLVHC~aG~~RTG~vva~~l~~------~g~s~~~ai~ey~~~~~~~~~~~~~~Fie  194 (201)
                      ++||+|||++|.||||+++++-..+      ..++..+++..++.- |+......+||+=
T Consensus       233 ~~PivVHCSaGvGRTGtfiaid~~l~~l~~~~~vdv~~~V~~lR~q-R~~mVqt~~QY~F  291 (314)
T 4ge6_A          233 EPPIVVHCSAGIGRTGTFCSLDICLAQLEELGTLNVFQTVSRMRTQ-RAFSIQTPEQYYF  291 (314)
T ss_dssp             SCCEEEECSSSSHHHHHHHHHHHHHHHHHHHSCBCHHHHHHHHTTT-STTCSCSHHHHHH
T ss_pred             CCCEEEECCCCCcHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHhh-cccccCCHHHHHH
Confidence            5799999999999999999865542      467778888877755 5445444555543

>2shp_A SHP-2, SYP, SHPTP-2; tyrosine phosphatase, insulin signaling, SH2 protein; HET: CAT; 2.00A {Homo sapiens} SCOP: c.45.1.2 d.93.1.1 d.93.1.1

Probab=98.34  E-value=1.8e-06  Score=79.20  Aligned_cols=67  Identities=13%  Similarity=0.184  Sum_probs=46.7

Q ss_pred             HHHHHHHHHHHHc-----cCCCcEEEEcCCCCChHHHHHHHHHHH-----CC----CCHHHHHHHHHHHhcCCCCchhhh
Q 028983          126 EDMIREALKVLLD-----VRNHPVLIHCKRGKHRTGCLVGCLRKL-----QK----WCLSSVFDEYQRFAAAKARVSDQR  191 (201)
Q Consensus       126 ~~~i~~~l~~l~~-----~~~~pVLVHC~aG~~RTG~vva~~l~~-----~g----~s~~~ai~ey~~~~~~~~~~~~~~  191 (201)
                      ...+.++++.+..     ..++||+|||.+|.||||+++|+..++     .|    ++..+++..++.. |+......+|
T Consensus       432 ~~~~l~~~~~v~~~~~~~~~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~~~~~~vdv~~~v~~lR~q-R~~~Vqt~~Q  510 (525)
T 2shp_A          432 PGGVLDFLEEVHHKQESIMDAGPVVVHCSAGIGRTGTFIVIDILIDIIREKGVDCDIDVPKTIQMVRSQ-RSGMVQTEAQ  510 (525)
T ss_dssp             HHHHHHHHHHHHHHHHHSTTCCCEEEECSSSSHHHHHHHHHHHHHHHHHHHCTTSEECHHHHHHHHHTT-STTSSCCHHH
T ss_pred             hHHHHHHHHHHHHHHhccCCCCCEEEEcCCCCchhHHHHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHh-CcccCCCHHH
Confidence            4555556666532     257999999999999999999985542     24    5777888887766 5555444455


Q ss_pred             hH
Q 028983          192 GT  193 (201)
Q Consensus       192 Fi  193 (201)
                      |+
T Consensus       511 Y~  512 (525)
T 2shp_A          511 YR  512 (525)
T ss_dssp             HH
T ss_pred             HH
Confidence            54

>3ps5_A Tyrosine-protein phosphatase non-receptor type 6; SH2, PTP, hydrolase, signaling protein; 3.10A {Homo sapiens}

Probab=98.32  E-value=1.6e-06  Score=80.85  Aligned_cols=66  Identities=11%  Similarity=0.122  Sum_probs=45.3

Q ss_pred             HHHHHHHHHHHc-----cCCCcEEEEcCCCCChHHHHHHHHHHH-----CC----CCHHHHHHHHHHHhcCCCCchhhhh
Q 028983          127 DMIREALKVLLD-----VRNHPVLIHCKRGKHRTGCLVGCLRKL-----QK----WCLSSVFDEYQRFAAAKARVSDQRG  192 (201)
Q Consensus       127 ~~i~~~l~~l~~-----~~~~pVLVHC~aG~~RTG~vva~~l~~-----~g----~s~~~ai~ey~~~~~~~~~~~~~~F  192 (201)
                      ..+.++++.+..     ...+||+|||.+|.||||+++|+..++     .|    ++..+++..++.. |+......+||
T Consensus       427 ~~~l~fl~~v~~~~~~~~~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~~~~~~vdv~~~V~~lR~q-R~~mVqt~~QY  505 (595)
T 3ps5_A          427 GGVLSFLDQINQRQESLPHAGPIIVHSSAGIGRTGTIIVIDMLMENISTKGLDCDIDIQKTIQMVRAQ-RSGMVQTEAQY  505 (595)
T ss_dssp             HHHHHHHHHHHHHHHHCTTCCCEEEECSSSSHHHHHHHHHHHHHHHHHHHCSSCEECHHHHHHHHHTT-STTSSCSHHHH
T ss_pred             HHHHHHHHHHHHHHhhcCCCCCEEEEcCCCCchHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHhh-cccccCCHHHH
Confidence            444456655532     257899999999999999999986542     24    6788888877755 55454444554


Q ss_pred             H
Q 028983          193 T  193 (201)
Q Consensus       193 i  193 (201)
                      +
T Consensus       506 ~  506 (595)
T 3ps5_A          506 K  506 (595)
T ss_dssp             H
T ss_pred             H
Confidence            4

>2jjd_A Receptor-type tyrosine-protein phosphatase epsilo; transmembrane, phosphoprotein, consorti structural, glycoprotein, SGC, PTPRE, membrane genomics; 3.20A {Homo sapiens}

Probab=98.31  E-value=8.8e-07  Score=82.64  Aligned_cols=76  Identities=21%  Similarity=0.249  Sum_probs=51.0

Q ss_pred             eCCCCCCCCCCCHHHHHHHHHHHHc---cCCCcEEEEcCCCCChHHHHHHHHHHH------CCCCHHHHHHHHHHHhcCC
Q 028983          114 IEGHKEPFVNIPEDMIREALKVLLD---VRNHPVLIHCKRGKHRTGCLVGCLRKL------QKWCLSSVFDEYQRFAAAK  184 (201)
Q Consensus       114 i~d~~~p~~~i~~~~i~~~l~~l~~---~~~~pVLVHC~aG~~RTG~vva~~l~~------~g~s~~~ai~ey~~~~~~~  184 (201)
                      +.|.+.|.   +...+.++++.+..   ...+||+|||++|.||||+++++..++      ..++..+++..++.. |+.
T Consensus       196 WpD~gvP~---~~~~~l~~~~~v~~~~~~~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~~~v~v~~~v~~lR~q-R~~  271 (599)
T 2jjd_A          196 WPDFGVPF---TPIGMLKFLKKVKTLNPVHAGPIVVHCSAGVGRTGTFIVIDAMMAMMHAEQKVDVFEFVSRIRNQ-RPQ  271 (599)
T ss_dssp             CCSSSCCS---CSHHHHHHHHHHHHHSCTTCCCEEEECSSSSSHHHHHHHHHHHHHHHHHHSEECHHHHHHHHHTT-STT
T ss_pred             CCCCCCCC---ChHHHHHHHHHHHhhccCCCceEEEEeCCCCcccchhhHHHHHHHHHhccCCcCHHHHHHHHHHh-hhc
Confidence            34555552   23455557666653   246899999999999999999864332      478899999988866 554


Q ss_pred             CCchhhhhH
Q 028983          185 ARVSDQRGT  193 (201)
Q Consensus       185 ~~~~~~~Fi  193 (201)
                      .....++|.
T Consensus       272 ~Vqt~~Qy~  280 (599)
T 2jjd_A          272 MVQTDMQYT  280 (599)
T ss_dssp             CSCCHHHHH
T ss_pred             cccchHHhe
Confidence            533444443

>1lar_A Protein (LAR); tyrosine phosphatease, LAR protein, hydrolase; 2.00A {Homo sapiens} SCOP: c.45.1.2 c.45.1.2 PDB: 2fh7_A 2nv5_A

Probab=98.31  E-value=1e-06  Score=81.75  Aligned_cols=76  Identities=12%  Similarity=0.143  Sum_probs=50.1

Q ss_pred             eCCCCCCCCCCCHHHHHHHHHHHHc-----cCCCcEEEEcCCCCChHHHHHHHHHHH------CCCCHHHHHHHHHHHhc
Q 028983          114 IEGHKEPFVNIPEDMIREALKVLLD-----VRNHPVLIHCKRGKHRTGCLVGCLRKL------QKWCLSSVFDEYQRFAA  182 (201)
Q Consensus       114 i~d~~~p~~~i~~~~i~~~l~~l~~-----~~~~pVLVHC~aG~~RTG~vva~~l~~------~g~s~~~ai~ey~~~~~  182 (201)
                      +.|++.|.   +...+.++++.+..     ..++||+|||++|.||||+++|+.+++      ..++..+++..++.. |
T Consensus       471 WPD~gvP~---~~~~~l~~i~~v~~~~~~~~~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~~~vdv~~~v~~lR~q-R  546 (575)
T 1lar_A          471 WPEQGVPK---TGEGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGRTGVFITLSIVLERMRYEGVVDMFQTVKTLRTQ-R  546 (575)
T ss_dssp             SCSSSCCS---SCHHHHHHHHHHHHHHHHTTCCSCEEEESSSSSSHHHHHHHHHHHHHHHHHHSEECHHHHHHHHTTT-S
T ss_pred             CCCCCCCC---CHHHHHHHHHHHHHHHhhcCCCCcEEEEECCCCchHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHhh-C
Confidence            44555553   22344446555432     247999999999999999999987663      356788888877765 5


Q ss_pred             CCCCchhhhhH
Q 028983          183 AKARVSDQRGT  193 (201)
Q Consensus       183 ~~~~~~~~~Fi  193 (201)
                      +......++|.
T Consensus       547 ~~~Vqt~~Qy~  557 (575)
T 1lar_A          547 PAMVQTEDQYQ  557 (575)
T ss_dssp             TTSSCSHHHHH
T ss_pred             chhcCCHHHHH
Confidence            55543444443

>1lar_A Protein (LAR); tyrosine phosphatease, LAR protein, hydrolase; 2.00A {Homo sapiens} SCOP: c.45.1.2 c.45.1.2 PDB: 2fh7_A 2nv5_A

Probab=98.28  E-value=1.6e-06  Score=80.41  Aligned_cols=75  Identities=17%  Similarity=0.209  Sum_probs=50.1

Q ss_pred             eCCCCCCCCCCCHHHHHHHHHHHHc---cCCCcEEEEcCCCCChHHHHHHHHHHH------CCCCHHHHHHHHHHHhcCC
Q 028983          114 IEGHKEPFVNIPEDMIREALKVLLD---VRNHPVLIHCKRGKHRTGCLVGCLRKL------QKWCLSSVFDEYQRFAAAK  184 (201)
Q Consensus       114 i~d~~~p~~~i~~~~i~~~l~~l~~---~~~~pVLVHC~aG~~RTG~vva~~l~~------~g~s~~~ai~ey~~~~~~~  184 (201)
                      +.|++.|.   +...+.++++.+..   ...+||+|||++|.||||+++++..++      ..++..+++..++.. |+.
T Consensus       182 WpD~gvP~---~~~~~l~~~~~v~~~~~~~~~pivVHCsaGvGRTGtfiaid~~l~~l~~~~~v~i~~~v~~lR~q-R~~  257 (575)
T 1lar_A          182 WPDHGVPE---YPTPILAFLRRVKACNPLDAGPMVVHCSAGVGRTGCFIVIDAMLERMKHEKTVDIYGHVTCMRSQ-RNY  257 (575)
T ss_dssp             SCSSSCCS---CSHHHHHHHHHHHHHSCTTCCCEEEESSSSSSHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHTT-STT
T ss_pred             CCCCCccc---CHHHHHHHHHHHHHhcCCCCCCEEEEecCCCcceeEEEEhHHHHHHHhccCCCCHHHHHHHHHhh-hhc
Confidence            45555553   12445556666543   246899999999999999999976653      357788888877765 554


Q ss_pred             CCchhhhh
Q 028983          185 ARVSDQRG  192 (201)
Q Consensus       185 ~~~~~~~F  192 (201)
                      .....++|
T Consensus       258 ~Vqt~~Qy  265 (575)
T 1lar_A          258 MVQTEDQY  265 (575)
T ss_dssp             SSCSHHHH
T ss_pred             cCCCHHHH
Confidence            53333443

>2jjd_A Receptor-type tyrosine-protein phosphatase epsilo; transmembrane, phosphoprotein, consorti structural, glycoprotein, SGC, PTPRE, membrane genomics; 3.20A {Homo sapiens}

Probab=98.27  E-value=2.8e-06  Score=79.26  Aligned_cols=76  Identities=14%  Similarity=0.177  Sum_probs=50.7

Q ss_pred             eCCCCCCCCCCCHHHHHHHHHHHHc----cCCCcEEEEcCCCCChHHHHHHHHHHH------CCCCHHHHHHHHHHHhcC
Q 028983          114 IEGHKEPFVNIPEDMIREALKVLLD----VRNHPVLIHCKRGKHRTGCLVGCLRKL------QKWCLSSVFDEYQRFAAA  183 (201)
Q Consensus       114 i~d~~~p~~~i~~~~i~~~l~~l~~----~~~~pVLVHC~aG~~RTG~vva~~l~~------~g~s~~~ai~ey~~~~~~  183 (201)
                      +.|.+.|.   +...+.++++.+..    ..++||+|||++|.||||+++|+..++      ..++..+++..++.. |+
T Consensus       490 WPD~gvP~---~~~~ll~~i~~v~~~~~~~~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~~~vdv~~~V~~lR~q-R~  565 (599)
T 2jjd_A          490 WPEIGIPA---EGKGMIDLIAAVQKQQQQTGNHPITVHCSAGAGRTGTFIALSNILERVKAEGLLDVFQAVKSLRLQ-RP  565 (599)
T ss_dssp             SCSSSCCS---CCHHHHHHHHHHHHHHHHSTTCCEEEECSSSSSHHHHHHHHHHHHHHHHHHSEECHHHHHHHHHTT-ST
T ss_pred             CCCCCCCC---ChHHHHHHHHHHHHHHhccCCCcEEEEeCCCCchHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHhh-Cc
Confidence            44555553   22344456655532    357999999999999999999987654      236788888888866 55


Q ss_pred             CCCchhhhhH
Q 028983          184 KARVSDQRGT  193 (201)
Q Consensus       184 ~~~~~~~~Fi  193 (201)
                      ......+||.
T Consensus       566 ~mVqt~~QY~  575 (599)
T 2jjd_A          566 HMVQTLEQYE  575 (599)
T ss_dssp             TSSCSHHHHH
T ss_pred             cccCCHHHHH
Confidence            5544445544

>1ygr_A CD45 protein tyrosine phosphatase; protein tyrosine phosphatase, RPTP, LCA, lymphocyte activation, hydrolase; HET: PTR; 2.90A {Homo sapiens} PDB: 1ygu_A*

Probab=98.26  E-value=3.3e-06  Score=78.89  Aligned_cols=76  Identities=16%  Similarity=0.162  Sum_probs=51.3

Q ss_pred             eCCCCCCCCCCCHHHHHHHHHHHHc---cCCCcEEEEcCCCCChHHHHHHHHHHH------CCCCHHHHHHHHHHHhcCC
Q 028983          114 IEGHKEPFVNIPEDMIREALKVLLD---VRNHPVLIHCKRGKHRTGCLVGCLRKL------QKWCLSSVFDEYQRFAAAK  184 (201)
Q Consensus       114 i~d~~~p~~~i~~~~i~~~l~~l~~---~~~~pVLVHC~aG~~RTG~vva~~l~~------~g~s~~~ai~ey~~~~~~~  184 (201)
                      +.|++.|.   +...+.++++.+..   ...+||+|||.+|.||||+++|+..++      ..++..+++..++.. |+.
T Consensus       196 WPD~gvP~---~~~~~l~~~~~v~~~~~~~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~~~v~v~~~v~~lR~q-R~~  271 (610)
T 1ygr_A          196 WPDHGVPE---DPHLLLKLRRRVNAFSNFFSGPIVVHSSAGVGRTGTYIGIDAMLEGLEAENKVDVYGYVVKLRRQ-RCL  271 (610)
T ss_dssp             CCTTSCCS---CHHHHHHHHHHHTTSCCTTCCCEEEECSSSSHHHHHHHHHHHHHHTHHHHSEECHHHHHHHHHTT-STT
T ss_pred             CCCCCCCC---CHHHHHHHHHHHHHhhccCCCCeEEEcCCCCCchhhHHHHHHHHHHHhcCCCCCHHHHHHHHHhh-hcC
Confidence            34445552   24556667666543   136899999999999999999987664      357788888887765 544


Q ss_pred             CCchhhhhH
Q 028983          185 ARVSDQRGT  193 (201)
Q Consensus       185 ~~~~~~~Fi  193 (201)
                      .....++|+
T Consensus       272 ~Vqt~~Qy~  280 (610)
T 1ygr_A          272 MVQVEAQYI  280 (610)
T ss_dssp             SSCCHHHHH
T ss_pred             CcCcHHHHH
Confidence            533444443

>2nlk_A Protein tyrosine phosphatase, receptor type, G VA (fragment); PTPRG, R-PTP gamma, protein tyrosine phosphatase gamma, D3S1 HPTPG, RPTPG, PTPG; 2.40A {Homo sapiens}

Probab=98.23  E-value=2.3e-06  Score=80.23  Aligned_cols=54  Identities=13%  Similarity=0.082  Sum_probs=40.6

Q ss_pred             cCCCcEEEEcCCCCChHHHHHHHHHHH------CCCCHHHHHHHHHHHhcCCCCchhhhhH
Q 028983          139 VRNHPVLIHCKRGKHRTGCLVGCLRKL------QKWCLSSVFDEYQRFAAAKARVSDQRGT  193 (201)
Q Consensus       139 ~~~~pVLVHC~aG~~RTG~vva~~l~~------~g~s~~~ai~ey~~~~~~~~~~~~~~Fi  193 (201)
                      ..++||+|||.+|.||||+++|+...+      ..++..+++..++.. |+......++|.
T Consensus       517 ~~~~PivVHCsaGiGRtGtf~a~~~~l~~l~~~~~vdv~~~v~~lR~q-R~~~Vqt~~Qy~  576 (627)
T 2nlk_A          517 TRDGPTIVHDEYGAVSAGMLCALTTLSQQLENENAVDVFQVAKMINLM-RPGVFTDIEQYQ  576 (627)
T ss_dssp             TCCSCEEEEESSSCHHHHHHHHHHHHHHHHHHHSEECHHHHHHHHHHH-STTSSCSHHHHH
T ss_pred             cCCCeEEEEeCCCCchHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHh-hhhhcCCHHHHH
Confidence            467999999999999999999987653      357888999988876 555533344443

>2nlk_A Protein tyrosine phosphatase, receptor type, G VA (fragment); PTPRG, R-PTP gamma, protein tyrosine phosphatase gamma, D3S1 HPTPG, RPTPG, PTPG; 2.40A {Homo sapiens}

Probab=98.06  E-value=6.6e-06  Score=77.13  Aligned_cols=76  Identities=14%  Similarity=0.103  Sum_probs=48.7

Q ss_pred             eCCCCCCCCCCCHHHHHHHHHHHHc---cCCCcEEEEcCCCCChHHHHHHHHHHH------CCCCHHHHHHHHHHHhcCC
Q 028983          114 IEGHKEPFVNIPEDMIREALKVLLD---VRNHPVLIHCKRGKHRTGCLVGCLRKL------QKWCLSSVFDEYQRFAAAK  184 (201)
Q Consensus       114 i~d~~~p~~~i~~~~i~~~l~~l~~---~~~~pVLVHC~aG~~RTG~vva~~l~~------~g~s~~~ai~ey~~~~~~~  184 (201)
                      +.|++.|.   +...+.++++.+..   ...+||+|||.+|.||||+++++..++      ..++..+++...+.. |+.
T Consensus       201 WPD~gvP~---~~~~ll~~i~~~~~~~~~~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~~~v~v~~~v~~lR~q-R~~  276 (627)
T 2nlk_A          201 WPDMGVPE---YALPVLTFVRRSSAARMPETGPVLVHCSAGVGRTGTYIVIDSMLQQIKDKSTVNVLGFLKHIRTQ-RNY  276 (627)
T ss_dssp             CCSSSSCS---CSHHHHHHHHHHHHTCCSSCCCEEEECSSSSHHHHHHHHHHHHHHHHHHHSEECHHHHHHHHTTT-STT
T ss_pred             CCCCCCCc---ChHHHHHHHHHHHhhccCCCceEEEEcCCCCCCccEEEEHHHHHHHHHhCCCCCHHHHHHHHHhh-CCC
Confidence            44555553   12344445555432   246999999999999999999876553      357778888877655 544


Q ss_pred             CCchhhhhH
Q 028983          185 ARVSDQRGT  193 (201)
Q Consensus       185 ~~~~~~~Fi  193 (201)
                      .....++|+
T Consensus       277 ~Vqt~~Qy~  285 (627)
T 2nlk_A          277 LVQTEEQYI  285 (627)
T ss_dssp             SSCCHHHHH
T ss_pred             CCCcHHHHH
Confidence            433444443

>1ohe_A CDC14B, CDC14B2 phosphatase; protein phosphatase, cell cycle, hydrolase; HET: SEP; 2.20A {Homo sapiens} SCOP: c.45.1.1 c.45.1.1 PDB: 1ohc_A 1ohd_A

Probab=94.28  E-value=0.076  Score=46.16  Aligned_cols=56  Identities=11%  Similarity=0.057  Sum_probs=40.0

Q ss_pred             CHHHHHHHHHHHHc-----cCCCcEEEEcCCCCC--h--HHHHHHHHHH-HCCCCHHHHHHHHHHH
Q 028983          125 PEDMIREALKVLLD-----VRNHPVLIHCKRGKH--R--TGCLVGCLRK-LQKWCLSSVFDEYQRF  180 (201)
Q Consensus       125 ~~~~i~~~l~~l~~-----~~~~pVLVHC~aG~~--R--TG~vva~~l~-~~g~s~~~ai~ey~~~  180 (201)
                      +..++-++...+.+     .....++|||+.|..  |  +.++++||++ .+||+.++|+..+...
T Consensus        55 ~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~r~naa~L~~~y~~~~~~~~~~~a~~~~~~~  120 (348)
T 1ohe_A           55 NLAMVYRYCCKINKKLKSITMLRKKIVHFTGSDQRKQANAAFLVGCYMVIYLGRTPEEAYRILIFG  120 (348)
T ss_dssp             CHHHHHHHHHHHHHHHHCGGGTTSEEEEEECSCHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHTTT
T ss_pred             cHHHHHHHHHHHHHHHhChhhcCCEEEEECCCCchHHHHHHHHHHHHHHHhcCCCHHHHHHHHHhc
Confidence            44555555544432     135789999999975  3  6788899988 5799999998866643

>1vee_A Proline-rich protein family; hypothetical protein, structural genomics, rhodanese domain, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} PDB: 2dcq_A

Probab=94.26  E-value=0.071  Score=39.39  Aligned_cols=28  Identities=18%  Similarity=0.125  Sum_probs=19.5

Q ss_pred             CCCcEEEEcCCCCChHHHHHHHHHHHCCCC
Q 028983          140 RNHPVLIHCKRGKHRTGCLVGCLRKLQKWC  169 (201)
Q Consensus       140 ~~~pVLVHC~aG~~RTG~vva~~l~~~g~s  169 (201)
                      .+.||+|+|.+|. ||..++. +|...|.+
T Consensus        73 ~~~~ivv~C~sG~-RS~~aa~-~L~~~G~~  100 (134)
T 1vee_A           73 ENTTLYILDKFDG-NSELVAE-LVALNGFK  100 (134)
T ss_dssp             GGCEEEEECSSST-THHHHHH-HHHHHTCS
T ss_pred             CCCEEEEEeCCCC-cHHHHHH-HHHHcCCc
Confidence            5789999999996 8865444 44444553

>1tq1_A AT5G66040, senescence-associated family protein; CESG, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: c.46.1.3

Probab=93.64  E-value=0.1  Score=38.23  Aligned_cols=85  Identities=9%  Similarity=0.062  Sum_probs=42.8

Q ss_pred             hhhHHHHHhcCCcEEEEcCCCCCCCchHHHHhhCCc-EEEEeeeCCCCCCCCCCCHHHHHHHHHHHHccCCCcEEEEcCC
Q 028983           72 SANFSFLQTLRLRSIIYLCPEPYPEANTEFLKSNGI-KLFQFAIEGHKEPFVNIPEDMIREALKVLLDVRNHPVLIHCKR  150 (201)
Q Consensus        72 ~~~l~~L~~lGIktII~Lr~e~~~~~~~~~~~~~gi-~~~~ipi~d~~~p~~~i~~~~i~~~l~~l~~~~~~pVLVHC~a  150 (201)
                      +.++..+.+.++ .|||+|+..      ++ ....| .-+++|+.....+....+.+.+.+.+..+  ..+.||+|+|..
T Consensus        22 ~~e~~~~l~~~~-~lIDvR~~~------e~-~~ghIpgAinip~~~~~~~~~~~~~~~~~~~~~~l--~~~~~ivvyC~~   91 (129)
T 1tq1_A           22 VTVAHDLLLAGH-RYLDVRTPE------EF-SQGHACGAINVPYMNRGASGMSKNTDFLEQVSSHF--GQSDNIIVGCQS   91 (129)
T ss_dssp             HHHHHHHHHHTC-CEEEESCHH------HH-HHCCBTTBEECCSCCCSTTTCCCTTTHHHHHTTTC--CTTSSEEEEESS
T ss_pred             HHHHHHHhcCCC-EEEECCCHH------HH-hcCCCCCcEECcHhhcccccccCCHHHHHHHHhhC--CCCCeEEEECCC
Confidence            344443333344 699999851      12 12223 23677874322111001123344333322  357899999999


Q ss_pred             CCChHHHHHHHHHHHCCC
Q 028983          151 GKHRTGCLVGCLRKLQKW  168 (201)
Q Consensus       151 G~~RTG~vva~~l~~~g~  168 (201)
                      |. |+..++..+. ..|.
T Consensus        92 G~-rs~~aa~~L~-~~G~  107 (129)
T 1tq1_A           92 GG-RSIKATTDLL-HAGF  107 (129)
T ss_dssp             CS-HHHHHHHHHH-HHHC
T ss_pred             Cc-HHHHHHHHHH-HcCC
Confidence            85 7765554443 3344

>2yf0_A Myotubularin-related protein 6; hydrolase; 2.65A {Homo sapiens}

Probab=92.82  E-value=0.13  Score=47.08  Aligned_cols=27  Identities=37%  Similarity=0.516  Sum_probs=23.5

Q ss_pred             cCCCcEEEEcCCCCChHHHHHHHHHHH
Q 028983          139 VRNHPVLIHCKRGKHRTGCLVGCLRKL  165 (201)
Q Consensus       139 ~~~~pVLVHC~aG~~RTG~vva~~l~~  165 (201)
                      ..+.+|||||..|.|||..++++.+.+
T Consensus       327 ~~g~sVLVhcsDGwDrT~ql~SLaqll  353 (512)
T 2yf0_A          327 VENASVLVHCSDGWDRTSQVCSLGSLL  353 (512)
T ss_dssp             TTCCCEEECTTTSSSHHHHHHHHHHHH
T ss_pred             hCCCeEEEECCCCccccHHHHHHHHHH
Confidence            368999999999999999998877653

>3d1p_A Putative thiosulfate sulfurtransferase YOR285W; atomic structure, atomic resolution structure, PSI, MCSG; HET: MSE; 0.98A {Saccharomyces cerevisiae}

Probab=92.60  E-value=0.19  Score=37.03  Aligned_cols=89  Identities=9%  Similarity=0.123  Sum_probs=46.4

Q ss_pred             ChhhHHHHHhc--CCcEEEEcCCCCCCCchHHHHhhCCcE-EEEeeeCCCCCCCCCCCHHHHHHHHHHHHccCCCcEEEE
Q 028983           71 DSANFSFLQTL--RLRSIIYLCPEPYPEANTEFLKSNGIK-LFQFAIEGHKEPFVNIPEDMIREALKVLLDVRNHPVLIH  147 (201)
Q Consensus        71 ~~~~l~~L~~l--GIktII~Lr~e~~~~~~~~~~~~~gi~-~~~ipi~d~~~p~~~i~~~~i~~~l~~l~~~~~~pVLVH  147 (201)
                      +..++..+-+.  +=-.|||+|+..      ++ ....|. -+++|+...... ...+.+.+.+.+....-..+.+|+|+
T Consensus        26 s~~el~~~l~~~~~~~~liDvR~~~------e~-~~ghIpgAinip~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~ivvy   97 (139)
T 3d1p_A           26 SFEDMKRIVGKHDPNVVLVDVREPS------EY-SIVHIPASINVPYRSHPDA-FALDPLEFEKQIGIPKPDSAKELIFY   97 (139)
T ss_dssp             CHHHHHHHHHHTCTTEEEEECSCHH------HH-HHCCCTTCEECCTTTCTTG-GGSCHHHHHHHHSSCCCCTTSEEEEE
T ss_pred             cHHHHHHHHhCCCCCeEEEECcCHH------HH-hCCCCCCcEEcCHHHhhhh-ccCCHHHHHHHHhccCCCCCCeEEEE
Confidence            34455443322  334699999851      12 122232 367887654221 12233445444432111357899999


Q ss_pred             cCCCCChHHHHHHHHHHHCCCC
Q 028983          148 CKRGKHRTGCLVGCLRKLQKWC  169 (201)
Q Consensus       148 C~aG~~RTG~vva~~l~~~g~s  169 (201)
                      |..|. |+.. ++.+|...|.+
T Consensus        98 C~~G~-rs~~-aa~~L~~~G~~  117 (139)
T 3d1p_A           98 CASGK-RGGE-AQKVASSHGYS  117 (139)
T ss_dssp             CSSSH-HHHH-HHHHHHTTTCC
T ss_pred             CCCCc-hHHH-HHHHHHHcCCC
Confidence            99984 6654 44555556764

>1zsq_A Myotubularin-related protein 2; protein-phospholipid complex, hydrolase; HET: PIB; 1.82A {Homo sapiens} SCOP: b.55.1.8 c.45.1.3 PDB: 1zvr_A*

Probab=92.48  E-value=0.18  Score=46.37  Aligned_cols=26  Identities=23%  Similarity=0.304  Sum_probs=22.3

Q ss_pred             CCCcEEEEcCCCCChHHHHHHHHHHH
Q 028983          140 RNHPVLIHCKRGKHRTGCLVGCLRKL  165 (201)
Q Consensus       140 ~~~pVLVHC~aG~~RTG~vva~~l~~  165 (201)
                      .+.+|||||..|.|||..++++.+.+
T Consensus       340 ~~~sVLvhcsdGwDrT~ql~SLaqll  365 (528)
T 1zsq_A          340 GKTSVVVHSSDGWDRTAQLTSLAMLM  365 (528)
T ss_dssp             TCCCEEEECSSSSSHHHHHHHHHHHH
T ss_pred             CCceEEEECCCCccchHHHHHHHHHH
Confidence            45699999999999999998877653

>3i2v_A Adenylyltransferase and sulfurtransferase MOCS3; rhodanese, UBA4, structural genomics, ubiquitin biology, structural genomics consortium, SGC; 1.25A {Homo sapiens}

Probab=92.28  E-value=0.21  Score=35.81  Aligned_cols=23  Identities=30%  Similarity=0.530  Sum_probs=16.6

Q ss_pred             CcEEEEcCCCCChHHHHHHHHHHH
Q 028983          142 HPVLIHCKRGKHRTGCLVGCLRKL  165 (201)
Q Consensus       142 ~pVLVHC~aG~~RTG~vva~~l~~  165 (201)
                      .+|+|+|..|. |+..++..++..
T Consensus        73 ~~ivv~C~~G~-rs~~a~~~L~~~   95 (127)
T 3i2v_A           73 VPIYVICKLGN-DSQKAVKILQSL   95 (127)
T ss_dssp             EEEEEECSSSS-HHHHHHHHHHHH
T ss_pred             CeEEEEcCCCC-cHHHHHHHHHHh
Confidence            49999999985 877655555444

>2fsx_A RV0390, COG0607: rhodanese-related sulfurtransferase; RV0390 BR SAD DATA with FBAR, structural genomics, PSI; 1.80A {Mycobacterium tuberculosis}

Probab=91.95  E-value=0.27  Score=36.73  Aligned_cols=28  Identities=18%  Similarity=0.342  Sum_probs=18.5

Q ss_pred             CCCcEEEEcCCCCChHHHHHHHHHHHCCCC
Q 028983          140 RNHPVLIHCKRGKHRTGCLVGCLRKLQKWC  169 (201)
Q Consensus       140 ~~~pVLVHC~aG~~RTG~vva~~l~~~g~s  169 (201)
                      .+.+|+|+|..|. |+.. ++.+|...|.+
T Consensus        79 ~~~~ivvyC~~G~-rS~~-aa~~L~~~G~~  106 (148)
T 2fsx_A           79 HERPVIFLCRSGN-RSIG-AAEVATEAGIT  106 (148)
T ss_dssp             --CCEEEECSSSS-THHH-HHHHHHHTTCC
T ss_pred             CCCEEEEEcCCCh-hHHH-HHHHHHHcCCc
Confidence            5789999999995 8764 44455555653

>1lw3_A Myotubularin-related protein 2; protein-phosphate complex, hydrolase; 2.30A {Homo sapiens} SCOP: b.55.1.8 c.45.1.3 PDB: 1m7r_A

Probab=91.52  E-value=0.26  Score=46.38  Aligned_cols=26  Identities=23%  Similarity=0.304  Sum_probs=22.3

Q ss_pred             CCCcEEEEcCCCCChHHHHHHHHHHH
Q 028983          140 RNHPVLIHCKRGKHRTGCLVGCLRKL  165 (201)
Q Consensus       140 ~~~pVLVHC~aG~~RTG~vva~~l~~  165 (201)
                      .+.+|||||..|.|||..++++...+
T Consensus       412 ~~~sVLVhcsDGwDrT~qlsSLaQLl  437 (657)
T 1lw3_A          412 GKTSVVVHSSDGWDRTAQLTSLAMLM  437 (657)
T ss_dssp             TCCCEEEECSSSSSHHHHHHHHHHHH
T ss_pred             CCceEEEECCCCccchHHHHHHHHHH
Confidence            45699999999999999998877653

>1urh_A 3-mercaptopyruvate sulfurtransferase; rhodanese; 2.8A {Escherichia coli} SCOP: c.46.1.2 c.46.1.2

Probab=90.42  E-value=0.67  Score=38.01  Aligned_cols=59  Identities=7%  Similarity=-0.019  Sum_probs=32.5

Q ss_pred             EEEeeeCCCCCCCCCCCHHHHHHHHHHHHccCCCcEEEEcCCCCChHHHHHHHHHHHCCCC
Q 028983          109 LFQFAIEGHKEPFVNIPEDMIREALKVLLDVRNHPVLIHCKRGKHRTGCLVGCLRKLQKWC  169 (201)
Q Consensus       109 ~~~ipi~d~~~p~~~i~~~~i~~~l~~l~~~~~~pVLVHC~aG~~RTG~vva~~l~~~g~s  169 (201)
                      -+++|+.+......-.+.+.+.+.+....-..+.||+|+|.+|. |+..++ .+|...|.+
T Consensus       198 A~nip~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ivv~C~~G~-rs~~a~-~~L~~~G~~  256 (280)
T 1urh_A          198 ALNVPWTELVREGELKTTDELDAIFFGRGVSYDKPIIVSCGSGV-TAAVVL-LALATLDVP  256 (280)
T ss_dssp             CEECCGGGGBSSSSBCCHHHHHHHHHTTTCCSSSCEEEECCSSS-THHHHH-HHHHHTTCS
T ss_pred             ceEeeHHHhhcCCccCCHHHHHHHHHHcCCCCCCCEEEECChHH-HHHHHH-HHHHHcCCC
Confidence            36777755322100113456665555321135789999999985 766544 444455653

>2jtq_A Phage shock protein E; solution structure rhodanese, stress response, transferase; NMR {Escherichia coli} PDB: 2jtr_A 2jts_A

Probab=90.13  E-value=0.61  Score=31.18  Aligned_cols=43  Identities=16%  Similarity=0.335  Sum_probs=27.3

Q ss_pred             CHHHHHHHHHHHHccCCCcEEEEcCCCCChHHHHHHHHHHHCCCC
Q 028983          125 PEDMIREALKVLLDVRNHPVLIHCKRGKHRTGCLVGCLRKLQKWC  169 (201)
Q Consensus       125 ~~~~i~~~l~~l~~~~~~pVLVHC~aG~~RTG~vva~~l~~~g~s  169 (201)
                      +.+.+.+.+..+.-..+.+|+++|..|. |+..+ +.+|...|.+
T Consensus        25 p~~~l~~~~~~l~~~~~~~ivv~C~~g~-rs~~a-a~~L~~~G~~   67 (85)
T 2jtq_A           25 PLKEVKERIATAVPDKNDTVKVYCNAGR-QSGQA-KEILSEMGYT   67 (85)
T ss_dssp             CHHHHHHHHHHHCCCTTSEEEEEESSSH-HHHHH-HHHHHHTTCS
T ss_pred             CHHHHHHHHHHhCCCCCCcEEEEcCCCc-hHHHH-HHHHHHcCCC
Confidence            3456666666653246789999999984 76554 4444455653

>1gmx_A GLPE protein; transferase, rhodanese, sulfurtransferase, glycerol metabolism; 1.1A {Escherichia coli} SCOP: c.46.1.3 PDB: 1gn0_A

Probab=86.66  E-value=1.1  Score=31.24  Aligned_cols=40  Identities=15%  Similarity=0.215  Sum_probs=25.4

Q ss_pred             HHHHHHHHHHHHccCCCcEEEEcCCCCChHHHHHHHHHHHCCCC
Q 028983          126 EDMIREALKVLLDVRNHPVLIHCKRGKHRTGCLVGCLRKLQKWC  169 (201)
Q Consensus       126 ~~~i~~~l~~l~~~~~~pVLVHC~aG~~RTG~vva~~l~~~g~s  169 (201)
                      .+.+.+.+..+  ..+.||+|+|..|. |+..++. +|...|.+
T Consensus        45 ~~~l~~~~~~l--~~~~~ivvyc~~g~-rs~~a~~-~L~~~G~~   84 (108)
T 1gmx_A           45 NDTLGAFMRDN--DFDTPVMVMCYHGN-SSKGAAQ-YLLQQGYD   84 (108)
T ss_dssp             HHHHHHHHHHS--CTTSCEEEECSSSS-HHHHHHH-HHHHHTCS
T ss_pred             HHHHHHHHHhc--CCCCCEEEEcCCCc-hHHHHHH-HHHHcCCc
Confidence            45555555553  36789999999985 7665444 34444553

>3flh_A Uncharacterized protein LP_1913; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} PDB: 3fnj_A 3i3u_A

Probab=85.44  E-value=0.51  Score=34.14  Aligned_cols=79  Identities=11%  Similarity=0.020  Sum_probs=42.6

Q ss_pred             ChhhHHHHHhcCC--cEEEEcCCCCCCCchHHHHhhCCcEEEEeeeCCCCCCCCCCCHHHHHHHHHHHHccCCCcEEEEc
Q 028983           71 DSANFSFLQTLRL--RSIIYLCPEPYPEANTEFLKSNGIKLFQFAIEGHKEPFVNIPEDMIREALKVLLDVRNHPVLIHC  148 (201)
Q Consensus        71 ~~~~l~~L~~lGI--ktII~Lr~e~~~~~~~~~~~~~gi~~~~ipi~d~~~p~~~i~~~~i~~~l~~l~~~~~~pVLVHC  148 (201)
                      ++.++..+-+.|-  -.|||+|+..      ++... |    |||=.      +.++.+.+.+.+..+  ..+.+|+|+|
T Consensus        18 s~~el~~~l~~~~~~~~liDvR~~~------e~~~~-g----hIpgA------~nip~~~l~~~~~~l--~~~~~ivvyC   78 (124)
T 3flh_A           18 DHHTVLADMQNATGKYVVLDVRNAP------AQVKK-D----QIKGA------IAMPAKDLATRIGEL--DPAKTYVVYD   78 (124)
T ss_dssp             CHHHHHHHHHHTCCCEEEEECCCSC------HHHHC-C----EETTC------EECCHHHHHHHGGGS--CTTSEEEEEC
T ss_pred             cHHHHHHHHHcCCCCEEEEECCCHH------HHHhc-C----cCCCC------EECCHHHHHHHHhcC--CCCCeEEEEe
Confidence            4445544433343  4799999852      12111 1    22210      123344555444332  3578999999


Q ss_pred             CCCCChH-HHHHHHHHHHCCCC
Q 028983          149 KRGKHRT-GCLVGCLRKLQKWC  169 (201)
Q Consensus       149 ~aG~~RT-G~vva~~l~~~g~s  169 (201)
                      ..|. |+ +..++.+|...|..
T Consensus        79 ~~g~-r~~s~~a~~~L~~~G~~   99 (124)
T 3flh_A           79 WTGG-TTLGKTALLVLLSAGFE   99 (124)
T ss_dssp             SSSS-CSHHHHHHHHHHHHTCE
T ss_pred             CCCC-chHHHHHHHHHHHcCCe
Confidence            9996 64 45555566666763

>3gk5_A Uncharacterized rhodanese-related protein TVG0868615; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Thermoplasma volcanium GSS1}

Probab=84.93  E-value=0.58  Score=32.99  Aligned_cols=39  Identities=21%  Similarity=0.284  Sum_probs=24.3

Q ss_pred             HHHHHHHHHHHHccCCCcEEEEcCCCCChHHHHHHHHHHHCCC
Q 028983          126 EDMIREALKVLLDVRNHPVLIHCKRGKHRTGCLVGCLRKLQKW  168 (201)
Q Consensus       126 ~~~i~~~l~~l~~~~~~pVLVHC~aG~~RTG~vva~~l~~~g~  168 (201)
                      .+.+.+.+..+  ..+.+|+++|..|. |+. .++.+|...|.
T Consensus        42 ~~~l~~~~~~l--~~~~~ivvyC~~G~-rs~-~aa~~L~~~G~   80 (108)
T 3gk5_A           42 ISELREKWKIL--ERDKKYAVICAHGN-RSA-AAVEFLSQLGL   80 (108)
T ss_dssp             HHHHHHHGGGS--CTTSCEEEECSSSH-HHH-HHHHHHHTTTC
T ss_pred             HHHHHHHHHhC--CCCCeEEEEcCCCc-HHH-HHHHHHHHcCC
Confidence            34454444433  36789999999884 765 44455555665

>3iwh_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics, C structural genomics of infectious diseases, csgid; 2.00A {Staphylococcus aureus subsp} PDB: 3mzz_A

Probab=84.10  E-value=0.87  Score=32.13  Aligned_cols=28  Identities=18%  Similarity=0.145  Sum_probs=19.9

Q ss_pred             CCCcEEEEcCCCCChHHHHHHHHHHHCCCC
Q 028983          140 RNHPVLIHCKRGKHRTGCLVGCLRKLQKWC  169 (201)
Q Consensus       140 ~~~pVLVHC~aG~~RTG~vva~~l~~~g~s  169 (201)
                      .+.||+|+|.+|. |+..+ +.+|...|.+
T Consensus        55 ~~~~ivv~C~~G~-rS~~a-a~~L~~~G~~   82 (103)
T 3iwh_A           55 KNEIYYIVCAGGV-RSAKV-VEYLEANGID   82 (103)
T ss_dssp             TTSEEEEECSSSS-HHHHH-HHHHHTTTCE
T ss_pred             CCCeEEEECCCCH-HHHHH-HHHHHHcCCC
Confidence            6789999999985 87654 4455555653

>3olh_A MST, 3-mercaptopyruvate sulfurtransferase; structural genomics, structural genomics consortium, SGC, RH fold; 2.50A {Homo sapiens}

Probab=83.56  E-value=1.4  Score=36.83  Aligned_cols=53  Identities=13%  Similarity=0.069  Sum_probs=31.8

Q ss_pred             HHHHHHHHHHHHccCCCcEEEEcCCCCChHHHHHHHHHHHCCCC----HHHHHHHHHHH
Q 028983          126 EDMIREALKVLLDVRNHPVLIHCKRGKHRTGCLVGCLRKLQKWC----LSSVFDEYQRF  180 (201)
Q Consensus       126 ~~~i~~~l~~l~~~~~~pVLVHC~aG~~RTG~vva~~l~~~g~s----~~~ai~ey~~~  180 (201)
                      .+.+.+.+....-..+.||+++|.+|. |+..+ +..|...|+.    ++.-+.++...
T Consensus       239 ~~~l~~~~~~~~~~~~~~iv~yC~sG~-rs~~a-~~~L~~~G~~~v~~~~Gg~~~W~~~  295 (302)
T 3olh_A          239 PEEIRHLFQEKKVDLSKPLVATCGSGV-TACHV-ALGAYLCGKPDVPIYDGSWVEWYMR  295 (302)
T ss_dssp             HHHHHHHHHHTTCCTTSCEEEECSSSS-TTHHH-HHHHHTTTCCCCCEESSHHHHHHHH
T ss_pred             HHHHHHHHHhcCCCCCCCEEEECCChH-HHHHH-HHHHHHcCCCCeeEeCCcHHHHhhc
Confidence            456666665432235789999999996 77644 3445556664    23334555543

>4f67_A UPF0176 protein LPG2838; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium; 1.79A {Legionella pneumophila subsp}

Probab=83.28  E-value=1.2  Score=37.15  Aligned_cols=41  Identities=15%  Similarity=0.163  Sum_probs=26.1

Q ss_pred             cCCCcEEEEcCCCCChHHHHHHHHHHHCCCC----HHHHHHHHHHHh
Q 028983          139 VRNHPVLIHCKRGKHRTGCLVGCLRKLQKWC----LSSVFDEYQRFA  181 (201)
Q Consensus       139 ~~~~pVLVHC~aG~~RTG~vva~~l~~~g~s----~~~ai~ey~~~~  181 (201)
                      ..+.+|+++|.+|. |+..+ +.+|...|.+    ++.=+..|....
T Consensus       179 ~kdk~IVvyC~~G~-RS~~A-a~~L~~~Gf~nV~~L~GGi~aW~~~~  223 (265)
T 4f67_A          179 KKDKKIAMFCTGGI-RCEKT-TAYMKELGFEHVYQLHDGILNYLESI  223 (265)
T ss_dssp             GTTSCEEEECSSSH-HHHHH-HHHHHHHTCSSEEEETTHHHHHHHHS
T ss_pred             CCCCeEEEEeCCCh-HHHHH-HHHHHHcCCCCEEEecCHHHHHHHhc
Confidence            46899999999885 76544 4445555664    344455566553

>3aay_A Putative thiosulfate sulfurtransferase; sulfurtranserase, structural genomics, PSI, structure initiative; 1.90A {Mycobacterium tuberculosis} PDB: 3aax_A 3hwi_A

Probab=81.74  E-value=1.4  Score=35.97  Aligned_cols=42  Identities=10%  Similarity=0.093  Sum_probs=27.2

Q ss_pred             HHHHHHHHHHHHccCCCcEEEEcCCCCChHHHHHHHHHH-HCCCC
Q 028983          126 EDMIREALKVLLDVRNHPVLIHCKRGKHRTGCLVGCLRK-LQKWC  169 (201)
Q Consensus       126 ~~~i~~~l~~l~~~~~~pVLVHC~aG~~RTG~vva~~l~-~~g~s  169 (201)
                      .+.+.+.+..+.-..+.+|+++|.+|. |+.. ++.+|. ..|+.
T Consensus       211 ~~~l~~~~~~~~~~~~~~iv~yC~~G~-rs~~-a~~~L~~~~G~~  253 (277)
T 3aay_A          211 DEELAKLYADAGLDNSKETIAYCRIGE-RSSH-TWFVLRELLGHQ  253 (277)
T ss_dssp             HHHHHHHHHHHTCCTTSCEEEECSSHH-HHHH-HHHHHHTTSCCS
T ss_pred             HHHHHHHHHHcCCCCCCCEEEEcCcHH-HHHH-HHHHHHHHcCCC
Confidence            456666665432236789999999986 7654 444555 46775

>3g5j_A Putative ATP/GTP binding protein; N-terminal domain of ATP/GTP binding protein, PSI, MCSG, STR genomics, protein structure initiative; HET: PGE; 1.76A {Clostridium difficile}

Probab=81.70  E-value=4.3  Score=28.77  Aligned_cols=27  Identities=26%  Similarity=0.354  Sum_probs=17.6

Q ss_pred             CC-CcEEEEcC-CCCChHHHHHHHHHHHCCC
Q 028983          140 RN-HPVLIHCK-RGKHRTGCLVGCLRKLQKW  168 (201)
Q Consensus       140 ~~-~pVLVHC~-aG~~RTG~vva~~l~~~g~  168 (201)
                      .+ .+|+|+|. +| .|+.. ++.+|...|.
T Consensus        87 ~~~~~ivvyC~~~G-~rs~~-a~~~L~~~G~  115 (134)
T 3g5j_A           87 LNYDNIVIYCARGG-MRSGS-IVNLLSSLGV  115 (134)
T ss_dssp             TTCSEEEEECSSSS-HHHHH-HHHHHHHTTC
T ss_pred             cCCCeEEEEECCCC-hHHHH-HHHHHHHcCC
Confidence            45 89999995 66 36654 4444555565

>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X

Probab=80.23  E-value=1.8  Score=35.19  Aligned_cols=40  Identities=20%  Similarity=0.252  Sum_probs=25.0

Q ss_pred             HHHHHHHHHHccCCCcEEEEcCCCCChHHHHHHHHHHHCCCC
Q 028983          128 MIREALKVLLDVRNHPVLIHCKRGKHRTGCLVGCLRKLQKWC  169 (201)
Q Consensus       128 ~i~~~l~~l~~~~~~pVLVHC~aG~~RTG~vva~~l~~~g~s  169 (201)
                      .+.+.+..+.-..+.+|+|||.+|. |+.. ++.+|...|+.
T Consensus       210 ~l~~~~~~~~~~~~~~ivvyC~~G~-rs~~-a~~~L~~~G~~  249 (271)
T 1e0c_A          210 DIAGRLEELGITPDKEIVTHCQTHH-RSGL-TYLIAKALGYP  249 (271)
T ss_dssp             THHHHHHHTTCCTTSEEEEECSSSS-HHHH-HHHHHHHTTCS
T ss_pred             HHHHHHHHcCCCCCCCEEEECCchH-HHHH-HHHHHHHcCCC
Confidence            4444454322236789999999995 7654 44455566764

>1rhs_A Sulfur-substituted rhodanese; transferase, sulfurtransferase; 1.36A {Bos taurus} SCOP: c.46.1.2 c.46.1.2 PDB: 1boh_A 1boi_A 1orb_A 2ora_A 1dp2_A* 1rhd_A

Probab=80.18  E-value=2.4  Score=35.06  Aligned_cols=52  Identities=12%  Similarity=0.157  Sum_probs=31.1

Q ss_pred             HHHHHHHHHHHHccCCCcEEEEcCCCCChHHHHHHHHHHHCCCC----HHHHHHHHHH
Q 028983          126 EDMIREALKVLLDVRNHPVLIHCKRGKHRTGCLVGCLRKLQKWC----LSSVFDEYQR  179 (201)
Q Consensus       126 ~~~i~~~l~~l~~~~~~pVLVHC~aG~~RTG~vva~~l~~~g~s----~~~ai~ey~~  179 (201)
                      .+.+.+.+....-..+.+|++||.+|. |+...+.. |...|+.    ++.-+.++..
T Consensus       225 ~~~l~~~~~~~~~~~~~~ivv~C~sG~-rs~~a~~~-L~~~G~~~v~~~~GG~~~W~~  280 (296)
T 1rhs_A          225 PEELRAMFEAKKVDLTKPLIATCRKGV-TACHIALA-AYLCGKPDVAIYDGSWFEWFH  280 (296)
T ss_dssp             HHHHHHHHHHTTCCTTSCEEEECSSSS-THHHHHHH-HHHTTCCCCEEESSHHHHHHH
T ss_pred             HHHHHHHHHHcCCCCCCCEEEECCcHH-HHHHHHHH-HHHcCCCCceeeCCcHHHHhc
Confidence            355655555421136789999999995 77665444 4455664    3344455554

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	201
d1xria_	151	c.45.1.1 (A:) Putative phosphatase At1g05000 {Thal	1e-49
d1vhra_	178	c.45.1.1 (A:) VH1-related dual-specificity phospha	6e-10
d1rxda_	152	c.45.1.1 (A:) Protein tyrosine phosphatase type IV	2e-08
d1ohea2	182	c.45.1.1 (A:199-380) Proline directed phosphatase	1e-07
d1i9sa_	194	c.45.1.1 (A:) mRNA capping enzyme, triphosphatase	9e-07
d1fpza_	176	c.45.1.1 (A:) Kinase associated phosphatase (kap)	2e-06
d1d5ra2	174	c.45.1.1 (A:14-187) Phoshphoinositide phosphatase	7e-05
d1ywfa1	272	c.45.1.5 (A:4-275) Phosphotyrosine protein phospha	3e-04
d1m3ga_	145	c.45.1.1 (A:) Mapk phosphatase {Human (Homo sapien	8e-04
d2pt0a1	313	c.45.1.4 (A:34-346) Myo-inositol hexaphosphate pho	0.002

>d1xria_ c.45.1.1 (A:) Putative phosphatase At1g05000 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 151

class: Alpha and beta proteins (a/b)
fold: (Phosphotyrosine protein) phosphatases II
superfamily: (Phosphotyrosine protein) phosphatases II
family: Dual specificity phosphatase-like
domain: Putative phosphatase At1g05000
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  156 bits (394), Expect = 1e-49
 Identities = 126/141 (89%), Positives = 134/141 (95%)

Query: 51  LIPPLNFSMVDNGIFRSGFPDSANFSFLQTLRLRSIIYLCPEPYPEANTEFLKSNGIKLF 110
           LIPPLNFSMVDNGIFRSGFPDSANFSFLQTL LRSIIYLCPEPYPE+N +FLKSNGI+LF
Sbjct: 2   LIPPLNFSMVDNGIFRSGFPDSANFSFLQTLGLRSIIYLCPEPYPESNLQFLKSNGIRLF 61

Query: 111 QFAIEGHKEPFVNIPEDMIREALKVLLDVRNHPVLIHCKRGKHRTGCLVGCLRKLQKWCL 170
           QF IEG+KEPFVNIP+  IR ALKVLLD +NHPVLIHCKRGKHRTGCLVGCLRKLQKWCL
Sbjct: 62  QFGIEGNKEPFVNIPDHKIRMALKVLLDEKNHPVLIHCKRGKHRTGCLVGCLRKLQKWCL 121

Query: 171 SSVFDEYQRFAAAKARVSDQR 191
           +S+FDEYQRFAAAKARVSDQR
Sbjct: 122 TSIFDEYQRFAAAKARVSDQR 142

>d1vhra_ c.45.1.1 (A:) VH1-related dual-specificity phosphatase, VHR {Human (Homo sapiens) [TaxId: 9606]} Length = 178

class: Alpha and beta proteins (a/b)
fold: (Phosphotyrosine protein) phosphatases II
superfamily: (Phosphotyrosine protein) phosphatases II
family: Dual specificity phosphatase-like
domain: VH1-related dual-specificity phosphatase, VHR
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.0 bits (129), Expect = 6e-10
 Identities = 26/128 (20%), Positives = 46/128 (35%), Gaps = 4/128 (3%)

Query: 52  IPPLNFSMVDNGIFRSGFPDSANFSFLQTLRLRSIIYLCPEPYP---EANTEFLKSNGIK 108
           +P    + V   I+      + +   LQ L +  ++             N  F K +GI 
Sbjct: 18  LPSQPCNEVTPRIYVGNASVAQDIPKLQKLGITHVLNAAEGRSFMHVNTNANFYKDSGIT 77

Query: 109 LFQFAIEGHKEPFVNIPEDMIREALKVLLDVRNHPVLIHCKRGKHRTGCLVGC-LRKLQK 167
                    +E  ++   +   + +   L  +N  VL+HC+ G  R+  LV   L   QK
Sbjct: 78  YLGIKANDTQEFNLSAYFERAADFIDQALAQKNGRVLVHCREGYSRSPTLVIAYLMMRQK 137

Query: 168 WCLSSVFD 175
             + S   
Sbjct: 138 MDVKSALS 145

>d1rxda_ c.45.1.1 (A:) Protein tyrosine phosphatase type IVa {Human (Homo sapiens), pr-1 [TaxId: 9606]} Length = 152

class: Alpha and beta proteins (a/b)
fold: (Phosphotyrosine protein) phosphatases II
superfamily: (Phosphotyrosine protein) phosphatases II
family: Dual specificity phosphatase-like
domain: Protein tyrosine phosphatase type IVa
species: Human (Homo sapiens), pr-1 [TaxId: 9606]

 Score = 49.3 bits (117), Expect = 2e-08
 Identities = 14/104 (13%), Positives = 32/104 (30%)

Query: 76  SFLQTLRLRSIIYLCPEPYPEANTEFLKSNGIKLFQFAIEGHKEPFVNIPEDMIREALKV 135
            F++ L+   +  +        +T  ++  GI +  +  +    P   I +D +      
Sbjct: 24  KFIEELKKYGVTTIVRVCEATYDTTLVEKEGIHVLDWPFDDGAPPSNQIVDDWLSLVKIK 83

Query: 136 LLDVRNHPVLIHCKRGKHRTGCLVGCLRKLQKWCLSSVFDEYQR 179
             +     + +HC  G  R   LV                  ++
Sbjct: 84  FREEPGCCIAVHCVAGLGRAPVLVALALIEGGMKYEDAVQFIRQ 127

>d1ohea2 c.45.1.1 (A:199-380) Proline directed phosphatase CDC14b2 {Human (Homo sapiens) [TaxId: 9606]} Length = 182

class: Alpha and beta proteins (a/b)
fold: (Phosphotyrosine protein) phosphatases II
superfamily: (Phosphotyrosine protein) phosphatases II
family: Dual specificity phosphatase-like
domain: Proline directed phosphatase CDC14b2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.3 bits (112), Expect = 1e-07
 Identities = 18/127 (14%), Positives = 38/127 (29%), Gaps = 11/127 (8%)

Query: 54  PLNFSMVDNGIFRSGFPDSANFSFLQTLRLRSIIYLCPEPYPEANTEFLKSNGIKLFQFA 113
           P + + +++G  +          + +   + +II L    Y           G       
Sbjct: 32  PHSRARLESGYHQ--HSPETYIQYFKNHNVTTIIRLNKRMYDAKRFTD---AGFDHHDLF 86

Query: 114 IEGHKEPFVNIPEDMIREALKVLLDVRNHPVLIHCKRGKHRTGCLVGC-LRKLQKWCLSS 172
                 P   I ++ +              + +H K G  RTG L+ C + K  +   + 
Sbjct: 87  FADGSTPTDAIVKEFLDICEN-----AEGAIAVHSKAGLGRTGTLIACYIMKHYRMTAAE 141

Query: 173 VFDEYQR 179
                + 
Sbjct: 142 TIAWVRI 148

>d1i9sa_ c.45.1.1 (A:) mRNA capping enzyme, triphosphatase domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 194

class: Alpha and beta proteins (a/b)
fold: (Phosphotyrosine protein) phosphatases II
superfamily: (Phosphotyrosine protein) phosphatases II
family: Dual specificity phosphatase-like
domain: mRNA capping enzyme, triphosphatase domain
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 45.1 bits (106), Expect = 9e-07
 Identities = 27/141 (19%), Positives = 53/141 (37%), Gaps = 5/141 (3%)

Query: 43  VVTGDEVTLIPPLNFSMVDNGIFRSGFPDSANFSFLQT--LRLRSIIYLCPEPYPEANTE 100
            V G  + L   L           + F  S   ++L++  +++  ++ L        +  
Sbjct: 15  PVAGRFLPLKTMLGPRYDSQVAEENRFHPSMLSNYLKSLKVKMSLLVDLTNTS-RFYDRN 73

Query: 101 FLKSNGIKLFQFAIEGHKE-PFVNIPEDMIREALKVLLDVRNHPVLIHCKRGKHRTGCLV 159
            ++  GIK  +   +GH E P     E  IR   +         + +HC  G +RTG L+
Sbjct: 74  DIEKEGIKYIKLQCKGHGECPTTENTETFIRLCERFNERSPPELIGVHCTHGFNRTGFLI 133

Query: 160 GC-LRKLQKWCLSSVFDEYQR 179
              L +   W + +    + +
Sbjct: 134 CAFLVEKMDWSIEAAVATFAQ 154

>d1fpza_ c.45.1.1 (A:) Kinase associated phosphatase (kap) {Human (Homo sapiens) [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a/b)
fold: (Phosphotyrosine protein) phosphatases II
superfamily: (Phosphotyrosine protein) phosphatases II
family: Dual specificity phosphatase-like
domain: Kinase associated phosphatase (kap)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.9 bits (103), Expect = 2e-06
 Identities = 17/109 (15%), Positives = 30/109 (27%), Gaps = 9/109 (8%)

Query: 78  LQTLRLRSIIYLCPEPYPEANT-----EFLKSNGIKLFQFAIEGHKEPFVNIPEDMIREA 132
           L++  ++ I   C              +  +  GI      I     P +    +++ E 
Sbjct: 43  LKSCGIQDIFVFCTRGELSKYRVPNLLDLYQQCGIITHHHPIADGGTPDIASCCEIMEEL 102

Query: 133 LKVLLDVRNHPVLIHCKRGKHRTGCLVGC--LRKLQKWCLSSVFDEYQR 179
              L        LIH   G  R+  +  C  L            D  + 
Sbjct: 103 TTCLK--NYRKTLIHSYGGLGRSCLVAACLLLYLSDTISPEQAIDSLRD 149

>d1d5ra2 c.45.1.1 (A:14-187) Phoshphoinositide phosphatase Pten (Pten tumor suppressor), N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 174

class: Alpha and beta proteins (a/b)
fold: (Phosphotyrosine protein) phosphatases II
superfamily: (Phosphotyrosine protein) phosphatases II
family: Dual specificity phosphatase-like
domain: Phoshphoinositide phosphatase Pten (Pten tumor suppressor), N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.6 bits (92), Expect = 7e-05
 Identities = 27/124 (21%), Positives = 50/124 (40%), Gaps = 6/124 (4%)

Query: 63  GIFRSGFPDSANFSFLQTLRLRSIIYLCPEPYPEANTEFLKSNGIKLFQFAIEGHKEPFV 122
           G++R+   D   F   +      I  LC E + +   +F      ++ Q+  E H  P +
Sbjct: 31  GVYRNNIDDVVRFLDSKHKNHYKIYNLCAERHYDT-AKF----NCRVAQYPFEDHNPPQL 85

Query: 123 NIPEDMIREALKVLLDVRNHPVLIHCKRGKHRTGCLVGCLRKLQKWCLSSVFDEYQRFAA 182
            + +    +  + L +  NH   IHCK GK RTG ++      +   L +  +    +  
Sbjct: 86  ELIKPFCEDLDQWLSEDDNHVAAIHCKAGKGRTGVMICAYLLHRGKFLKAQ-EALDFYGE 144

Query: 183 AKAR 186
            + R
Sbjct: 145 VRTR 148

>d1ywfa1 c.45.1.5 (A:4-275) Phosphotyrosine protein phosphatase PtpB {Mycobacterium tuberculosis [TaxId: 1773]} Length = 272

class: Alpha and beta proteins (a/b)
fold: (Phosphotyrosine protein) phosphatases II
superfamily: (Phosphotyrosine protein) phosphatases II
family: Mycobacterial PtpB-like
domain: Phosphotyrosine protein phosphatase PtpB
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 38.3 bits (88), Expect = 3e-04
 Identities = 30/155 (19%), Positives = 55/155 (35%), Gaps = 23/155 (14%)

Query: 19  EEAEQMCRTIEVASVVDL-------SPQPAPVVTGDEVTLIPPLNFSMVDNGIFRSGFPD 71
           +      R + +  V DL          P  V  G +V L+P                 D
Sbjct: 35  DAGRATLRRLGITDVADLRSSREVARRGPGRVPDGIDVHLLP----------FPDLADDD 84

Query: 72  SANFSFLQTLRLRSIIYLCPEPYPEANTEFLKSNGIKLFQFAIEGHKE-PFVNIPEDMIR 130
           + + +  +T   R    L  +     + E  +S      ++  + +++ P  N  +  + 
Sbjct: 85  ADDSAPHETAFKR---LLTNDGSNGESGESSQSINDAATRYMTDEYRQFPTRNGAQRALH 141

Query: 131 EALKVLLDVRNHPVLIHCKRGKHRTGCLVGCLRKL 165
             + +L      PVL HC  GK RTG +V  + + 
Sbjct: 142 RVVTLLAA--GRPVLTHCFAGKDRTGFVVALVLEA 174

>d1m3ga_ c.45.1.1 (A:) Mapk phosphatase {Human (Homo sapiens), pac-1 [TaxId: 9606]} Length = 145

class: Alpha and beta proteins (a/b)
fold: (Phosphotyrosine protein) phosphatases II
superfamily: (Phosphotyrosine protein) phosphatases II
family: Dual specificity phosphatase-like
domain: Mapk phosphatase
species: Human (Homo sapiens), pac-1 [TaxId: 9606]

 Score = 35.9 bits (82), Expect = 8e-04
 Identities = 15/121 (12%), Positives = 37/121 (30%), Gaps = 12/121 (9%)

Query: 58  SMVDNGIFRSGFPDSANFSFLQTLRLRSIIYLCPEP--YPEANTEFLKSNGIKLFQFAIE 115
             +   +F      S++   LQ   + +++ +      + E    +            I 
Sbjct: 5   VEILPYLFLGSCSHSSDLQGLQACGITAVLNVSASCPNHFEGLFRYKSIPVEDNQMVEIS 64

Query: 116 GHKEPFVNIPEDMIREALKVLLDVRNHPVLIHCKRGKHRTGCLVGC-LRKLQKWCLSSVF 174
              +  +   + +               VL+H + G  R+  +    L + ++  L   F
Sbjct: 65  AWFQEAIGFIDWVKN---------SGGRVLVHSQAGISRSATICLAYLMQSRRVRLDEAF 115

Query: 175 D 175
           D
Sbjct: 116 D 116

>d2pt0a1 c.45.1.4 (A:34-346) Myo-inositol hexaphosphate phosphohydrolase (phytase) PhyA {Selenomonas ruminantium [TaxId: 971]} Length = 313

class: Alpha and beta proteins (a/b)
fold: (Phosphotyrosine protein) phosphatases II
superfamily: (Phosphotyrosine protein) phosphatases II
family: Myo-inositol hexaphosphate phosphohydrolase (phytase) PhyA
domain: Myo-inositol hexaphosphate phosphohydrolase (phytase) PhyA
species: Selenomonas ruminantium [TaxId: 971]

 Score = 35.8 bits (82), Expect = 0.002
 Identities = 13/63 (20%), Positives = 25/63 (39%), Gaps = 5/63 (7%)

Query: 100 EFLKSNGIKLFQFAIEGHKEPFVNIPEDMIREALKVLLDV-RNHPVLIHCKRGKHRTGCL 158
           E  ++ G++ F+ A   H  P      + I   L     + ++  +  HC+ G  RT   
Sbjct: 174 EVAEAAGMRYFRIAATDHVWP----TPENIDRFLAFYRTLPQDAWLHFHCEAGVGRTTAF 229

Query: 159 VGC 161
           +  
Sbjct: 230 MVM 232

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	201
d1xria_	151	Putative phosphatase At1g05000 {Thale cress (Arabi	100.0
d1ohea2	182	Proline directed phosphatase CDC14b2 {Human (Homo	99.91
d1vhra_	178	VH1-related dual-specificity phosphatase, VHR {Hum	99.9
d1fpza_	176	Kinase associated phosphatase (kap) {Human (Homo s	99.87
d1rxda_	152	Protein tyrosine phosphatase type IVa {Human (Homo	99.87
d1mkpa_	144	Mapk phosphatase {Human (Homo sapiens), pyst1 (mkp	99.86
d1m3ga_	145	Mapk phosphatase {Human (Homo sapiens), pac-1 [Tax	99.84
d1ywfa1	272	Phosphotyrosine protein phosphatase PtpB {Mycobact	99.81
d1i9sa_	194	mRNA capping enzyme, triphosphatase domain {Mouse	99.69
d1d5ra2	174	Phoshphoinositide phosphatase Pten (Pten tumor sup	99.62
d2pt0a1	313	Myo-inositol hexaphosphate phosphohydrolase (phyta	99.23
d1g4us2	243	SptP tyrosine phosphatase, catalytic domain {Salmo	98.63
d1wcha_	308	Tyrosine-protein phosphatase, non-receptor type 13	98.47
d1lyva_	283	Protein-tyrosine phosphatase YopH, catalytic domai	98.31
d1jlna_	297	Tyrosine phosphatase {Mouse (Mus musculus), ptp-sl	98.3
d1lara1	317	RPTP Lar {Human (Homo sapiens) [TaxId: 9606]}	98.29
d1l8ka_	273	Tyrosine phosphatase {Human (Homo sapiens), T-cell	98.28
d1rpma_	278	Tyrosine phosphatase {Human (Homo sapiens), mu [Ta	98.28
d2shpa1	307	Tyrosine phosphatase {Human (Homo sapiens), shp-2	98.27
d1yfoa_	288	Tyrosine phosphatase {Mouse (Mus musculus) [TaxId:	98.25
d1p15a_	245	Protein-tyrosine phosphatase alpha {Mouse (Mus mus	98.19
d1fpra_	284	Tyrosine phosphatase {Human (Homo sapiens), shp-1	98.18
d2f71a1	297	Tyrosine phosphatase {Human (Homo sapiens), 1B [Ta	98.15
d1lara2	249	RPTP Lar {Human (Homo sapiens) [TaxId: 9606]}	98.0
d1tq1a_	119	Thiosulfate sulfurtransferase/Senescence-associate	95.41
d1urha2	120	3-mercaptopyruvate sulfurtransferase {Escherichia	94.42
d1zsqa2	387	Myotubularin-related protein 2, C-terminal domain	93.23
d1ohea1	157	Proline directed phosphatase CDC14b2 {Human (Homo	89.89
d1yt8a4	130	Thiosulfate sulfurtransferase PA2603 {Pseudomonas	89.49
d1uara2	141	Sulfurtransferase {Thermus thermophilus [TaxId: 27	89.3
d1gmxa_	108	Sulfurtransferase GlpE {Escherichia coli [TaxId: 5	88.32
d1t3ka_	132	Dual specificity phosphatase Cdc25 {Thale cress (A	87.27
d1rhsa2	144	Rhodanese {Cow (Bos taurus) [TaxId: 9913]}	86.38
d1yt8a1	136	Thiosulfate sulfurtransferase PA2603 {Pseudomonas	82.46

>d1xria_ c.45.1.1 (A:) Putative phosphatase At1g05000 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: (Phosphotyrosine protein) phosphatases II
superfamily: (Phosphotyrosine protein) phosphatases II
family: Dual specificity phosphatase-like
domain: Putative phosphatase At1g05000
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=4e-41  Score=261.99  Aligned_cols=150  Identities=85%  Similarity=1.389  Sum_probs=138.7

Q ss_pred             eeeCCCCccccccceEecCCCChhhHHHHHhcCCcEEEEcCCCCCCCchHHHHhhCCcEEEEeeeCCCCCCCCCCCHHHH
Q 028983           50 TLIPPLNFSMVDNGIFRSGFPDSANFSFLQTLRLRSIIYLCPEPYPEANTEFLKSNGIKLFQFAIEGHKEPFVNIPEDMI  129 (201)
Q Consensus        50 ~~~pp~nf~~V~~~Lyrsg~p~~~~l~~L~~lGIktII~Lr~e~~~~~~~~~~~~~gi~~~~ipi~d~~~p~~~i~~~~i  129 (201)
                      +++||.||++|.++|||||+|++.++++|+++|||||||||+++......+++...||+|+++|+.+...+......+.+
T Consensus         1 ~~~pp~nF~~V~~~lyRs~~~t~~~~~~L~~lgIktIidLr~~~e~~~~~~~~~~~gi~~~~ip~~~~~~~~~~~~~~~~   80 (151)
T d1xria_           1 HLIPPLNFSMVDNGIFRSGFPDSANFSFLQTLGLRSIIYLCPEPYPESNLQFLKSNGIRLFQFGIEGNKEPFVNIPDHKI   80 (151)
T ss_dssp             CBCCCTTCEEEETTEEEESCCCHHHHHHHHHHTCSEEEECCSSCCCHHHHHHHHHHTCEEEECCCCCCCGGGCCCCHHHH
T ss_pred             CCCCCcccceecCCceecCCCCHHHHHHHHHCCCCEEEECCCcchhhcccchhhhcCceEeecCccccccccccccHHHH
Confidence            47999999999999999999999999999999999999999986666677888889999999999998776666678899


Q ss_pred             HHHHHHHHccCCCcEEEEcCCCCChHHHHHHHHHHHCCCCHHHHHHHHHHHhcCCCCchhhhhHhhhccc
Q 028983          130 REALKVLLDVRNHPVLIHCKRGKHRTGCLVGCLRKLQKWCLSSVFDEYQRFAAAKARVSDQRGTRILSPA  199 (201)
Q Consensus       130 ~~~l~~l~~~~~~pVLVHC~aG~~RTG~vva~~l~~~g~s~~~ai~ey~~~~~~~~~~~~~~Fie~f~~~  199 (201)
                      ..+++.+.+..++||||||++|+||||+++|+||+.+||+.++|++||++++.+..+..+++|||.|+++
T Consensus        81 ~~~~~~~~~~~~~pvlvHC~~GkdRTG~v~a~~l~~~g~~~~~i~~dy~~~~~~~~~~~~~~fiE~f~~~  150 (151)
T d1xria_          81 RMALKVLLDEKNHPVLIHCKRGKHRTGCLVGCLRKLQKWCLTSIFDEYQRFAAAKARVSDQRFMEIFDVS  150 (151)
T ss_dssp             HHHHHHHHCGGGCSEEEECSSSSSHHHHHHHHHHHHTTBCHHHHHHHHHHHHGGGCCHHHHHHHHTCCCC
T ss_pred             HHHHHHHhcCCCCCEEEEcCCCchHHHHHHHHHHHHcCCCHHHHHHHHHHhccCcccHHHHHHHHHhCCC
Confidence            9999999888899999999999999999999999999999999999999998888888899999999975

>d1ohea2 c.45.1.1 (A:199-380) Proline directed phosphatase CDC14b2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: (Phosphotyrosine protein) phosphatases II
superfamily: (Phosphotyrosine protein) phosphatases II
family: Dual specificity phosphatase-like
domain: Proline directed phosphatase CDC14b2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=3e-24  Score=171.57  Aligned_cols=135  Identities=14%  Similarity=0.213  Sum_probs=108.8

Q ss_pred             Cccccccc-eEecCCCCh--------------hhHHHHHhcCCcEEEEcCCCCCCCchHHHHhhCCcEEEEeeeCCCCCC
Q 028983           56 NFSMVDNG-IFRSGFPDS--------------ANFSFLQTLRLRSIIYLCPEPYPEANTEFLKSNGIKLFQFAIEGHKEP  120 (201)
Q Consensus        56 nf~~V~~~-Lyrsg~p~~--------------~~l~~L~~lGIktII~Lr~e~~~~~~~~~~~~~gi~~~~ipi~d~~~p  120 (201)
                      +|.||.|+ +..++.|..              ..+++|+++||++||||+.+.++   .+.+...||+|+++|+.|...|
T Consensus        17 D~~wI~P~~~ia~s~P~~~~~~~~~~~~~~~~~~l~~l~~~gi~~Ii~l~~~~~~---~~~~~~~gi~~~~~p~~D~~~P   93 (182)
T d1ohea2          17 DLNWIIPDRFIAFCGPHSRARLESGYHQHSPETYIQYFKNHNVTTIIRLNKRMYD---AKRFTDAGFDHHDLFFADGSTP   93 (182)
T ss_dssp             CEEEEETTTEEEECCCCSSCBCSTTCCBCCTHHHHHHHHHTTEEEEEECSCCSSC---THHHHTTTCEEEECCCCTTCCC
T ss_pred             CcceEccCCeEEEcCCCccccccccccccCHHHHHHHHHhcCCCEEEEecCCCcC---ccccccCCcEEEecCCCCCCCc
Confidence            47777776 555566642              23789999999999999987543   3556778999999999998887


Q ss_pred             CCCCCHHHHHHHHHHHHccCCCcEEEEcCCCCChHHHHHHHHHHH-CCCCHHHHHHHHHHHhcCCC-CchhhhhHhhhcc
Q 028983          121 FVNIPEDMIREALKVLLDVRNHPVLIHCKRGKHRTGCLVGCLRKL-QKWCLSSVFDEYQRFAAAKA-RVSDQRGTRILSP  198 (201)
Q Consensus       121 ~~~i~~~~i~~~l~~l~~~~~~pVLVHC~aG~~RTG~vva~~l~~-~g~s~~~ai~ey~~~~~~~~-~~~~~~Fie~f~~  198 (201)
                      .    .+.+.++++.+.+ .++||+|||.+|+||||+++|+||+. .||+.++|++.++.. |+.+ ...|++|+..|+.
T Consensus        94 ~----~~~i~~~i~~~~~-~~~~V~VHC~~G~gRsgt~~a~yL~~~~~~~~~~Al~~vr~~-Rp~~i~~~qq~fl~~~~~  167 (182)
T d1ohea2          94 T----DAIVKEFLDICEN-AEGAIAVHSKAGLGRTGTLIACYIMKHYRMTAAETIAWVRIC-RPGSVIGPQQQFLVMKQT  167 (182)
T ss_dssp             C----HHHHHHHHHHHHS-CSSEEEEECSSSSHHHHHHHHHHHHHHHCCCHHHHHHHHHHH-STTCSCTHHHHHHHHHHH
T ss_pred             C----HHHHHHHHHHHHc-CCCcEEEEeCCCCcchHHHHHHHHHHHcCCCHHHHHHHHHHH-CCCCccCHHHHHHHHHHH
Confidence            4    6788888888764 68999999999999999999999985 699999999988766 5543 4578899988764


Q ss_pred             c
Q 028983          199 A  199 (201)
Q Consensus       199 ~  199 (201)
                      .
T Consensus       168 ~  168 (182)
T d1ohea2         168 N  168 (182)
T ss_dssp             H
T ss_pred             H
Confidence            3

>d1vhra_ c.45.1.1 (A:) VH1-related dual-specificity phosphatase, VHR {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: (Phosphotyrosine protein) phosphatases II
superfamily: (Phosphotyrosine protein) phosphatases II
family: Dual specificity phosphatase-like
domain: VH1-related dual-specificity phosphatase, VHR
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=9.6e-24  Score=167.35  Aligned_cols=146  Identities=18%  Similarity=0.228  Sum_probs=112.3

Q ss_pred             CCCCCeeeeCCCCccccccceEecCCCChhhHHHHHhcCCcEEEEcCCCCC---CCchHHHHhhCCcEEEEeeeCCCCCC
Q 028983           44 VTGDEVTLIPPLNFSMVDNGIFRSGFPDSANFSFLQTLRLRSIIYLCPEPY---PEANTEFLKSNGIKLFQFAIEGHKEP  120 (201)
Q Consensus        44 ~~~~~~~~~pp~nf~~V~~~Lyrsg~p~~~~l~~L~~lGIktII~Lr~e~~---~~~~~~~~~~~gi~~~~ipi~d~~~p  120 (201)
                      .++.+.+..|...+.+|.|+||.|+.+.+.+.+.|+++||++|||++.+..   ......+.+..|++|+++|+.|...+
T Consensus        10 ~~~~~~~~~p~~p~~~I~~~LylG~~~~a~d~~~L~~~gI~~Iin~~~~~~~~~~~~~~~~~~~~~i~y~~ipi~D~~~~   89 (178)
T d1vhra_          10 SDGSGCYSLPSQPCNEVTPRIYVGNASVAQDIPKLQKLGITHVLNAAEGRSFMHVNTNANFYKDSGITYLGIKANDTQEF   89 (178)
T ss_dssp             SSSSSCCCCCSSSEEEEETTEEEECHHHHTCHHHHHHHTCCEEEETTBSSSTTSBCCCHHHHTTTTCEEEECCCCCSTTC
T ss_pred             hCCCccccCCCCCcCEeeCCEEECChhHhcCHHHHHHcCCEEEEEcCcccccccccccccccccCCcEEEEEecCCCcch
Confidence            445566667777799999999999999999999999999999999997621   12345667788999999999986543


Q ss_pred             CCCCCHHHHHHHHHHH---HccCCCcEEEEcCCCCChHHHHHHHHHH-HCCCCHHHHHHHHHHHhcCCCCchhhhhHhh
Q 028983          121 FVNIPEDMIREALKVL---LDVRNHPVLIHCKRGKHRTGCLVGCLRK-LQKWCLSSVFDEYQRFAAAKARVSDQRGTRI  195 (201)
Q Consensus       121 ~~~i~~~~i~~~l~~l---~~~~~~pVLVHC~aG~~RTG~vva~~l~-~~g~s~~~ai~ey~~~~~~~~~~~~~~Fie~  195 (201)
                      .  + .+.+.+++++|   ....+++|||||.+|.+|||+++++|++ ..||++++|++-++ ..++ .. .|..|+++
T Consensus        90 ~--i-~~~~~~~~~fi~~~~~~~~~~VLVHC~~G~sRS~~vv~aYLm~~~~~s~~~A~~~vr-~~R~-i~-pn~~f~~q  162 (178)
T d1vhra_          90 N--L-SAYFERAADFIDQALAQKNGRVLVHCREGYSRSPTLVIAYLMMRQKMDVKSALSIVR-QNRE-IG-PNDGFLAQ  162 (178)
T ss_dssp             C--G-GGGHHHHHHHHHHHHTSTTCCEEEECSSSSSHHHHHHHHHHHHHSCCCHHHHHHHHH-HHSC-CC-CCHHHHHH
T ss_pred             h--H-HHHHHHHHHHhhhhhhcCCceEEEEcCCCCccHHHHHHHHHHHhcCCCHHHHHHHHH-hCCC-CC-CCHHHHHH
Confidence            2  2 23344444444   3345679999999999999999999998 56999999998554 5566 43 58877764

>d1fpza_ c.45.1.1 (A:) Kinase associated phosphatase (kap) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: (Phosphotyrosine protein) phosphatases II
superfamily: (Phosphotyrosine protein) phosphatases II
family: Dual specificity phosphatase-like
domain: Kinase associated phosphatase (kap)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=2.4e-21  Score=153.49  Aligned_cols=135  Identities=15%  Similarity=0.186  Sum_probs=106.0

Q ss_pred             cccceEecCCCC----------hhhHHHHHhcCCcEEEEcCCCC----C-CCchHHHHhhCCcEEEEeeeCCCCCCCCCC
Q 028983           60 VDNGIFRSGFPD----------SANFSFLQTLRLRSIIYLCPEP----Y-PEANTEFLKSNGIKLFQFAIEGHKEPFVNI  124 (201)
Q Consensus        60 V~~~Lyrsg~p~----------~~~l~~L~~lGIktII~Lr~e~----~-~~~~~~~~~~~gi~~~~ipi~d~~~p~~~i  124 (201)
                      +.+.|-.++.|.          ..+++.|++.||++||||..+.    + .....+.++..||+|+|+|+.|...|.   
T Consensus        15 ~~~~lgl~~~Pg~~~~~~~r~~~~dl~~L~~~gi~~Vv~L~~~~E~~~~~~~~~~~~~~~~gi~~~~~p~~D~~~p~---   91 (176)
T d1fpza_          15 CSQFLGLCALPGCKFKDVRRNVQKDTEELKSCGIQDIFVFCTRGELSKYRVPNLLDLYQQCGIITHHHPIADGGTPD---   91 (176)
T ss_dssp             CCCEEEEESCTTCEETTEECCHHHHHHHHHHHTCCEEEECCCHHHHHHTTCTTHHHHHHHTTCEEEECCCCTTCCCC---
T ss_pred             CccceEEecCCCCCCcccccCHHHHHHHHHhCCCCEEEEeCChhhhhhcCCCcHHHHHHHcCCEEEeCCccCCCchh---
Confidence            344466666664          3578999999999999999751    1 123566778899999999999998885   


Q ss_pred             CHHHHHHHHHHHHc--cCCCcEEEEcCCCCChHHHHHHHHHHH--CCCCHHHHHHHHHHHhcCCC--CchhhhhHhhhcc
Q 028983          125 PEDMIREALKVLLD--VRNHPVLIHCKRGKHRTGCLVGCLRKL--QKWCLSSVFDEYQRFAAAKA--RVSDQRGTRILSP  198 (201)
Q Consensus       125 ~~~~i~~~l~~l~~--~~~~pVLVHC~aG~~RTG~vva~~l~~--~g~s~~~ai~ey~~~~~~~~--~~~~~~Fie~f~~  198 (201)
                       .+.+.++++.+.+  .++++|+|||++|+||||+++++||+.  .|++.++|++.++...++.+  ...|.+|+..|.-
T Consensus        92 -~~~~~~~~~~i~~~l~~~~~V~VHC~~G~gRtg~v~~~~Li~~~~~~~~~~Ai~~vr~~R~~~~i~t~~Q~~~l~~f~~  170 (176)
T d1fpza_          92 -IASCCEIMEELTTCLKNYRKTLIHSYGGLGRSCLVAACLLLYLSDTISPEQAIDSLRDLRGSGAIQTIKQYNYLHEFRD  170 (176)
T ss_dssp             -HHHHHHHHHHHHHHHHTTCCEEEECSSSSSHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHCTTSSCSHHHHHHHTTHHH
T ss_pred             -hHHHHHHHHHHHHHHHcCCeEEEEecCCCCchHHHHHHHHHHHhcCCCHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHH
Confidence             5666667776654  368899999999999999999999985  48999999999988755544  3478999998863

>d1rxda_ c.45.1.1 (A:) Protein tyrosine phosphatase type IVa {Human (Homo sapiens), pr-1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: (Phosphotyrosine protein) phosphatases II
superfamily: (Phosphotyrosine protein) phosphatases II
family: Dual specificity phosphatase-like
domain: Protein tyrosine phosphatase type IVa
species: Human (Homo sapiens), pr-1 [TaxId: 9606]

Probab=99.87  E-value=9.2e-22  Score=151.48  Aligned_cols=129  Identities=15%  Similarity=0.243  Sum_probs=98.9

Q ss_pred             eEecCCCChh----hHHHHHhcCCcEEEEcCCCCCCCchHHHHhhCCcEEEEeeeCCCCCCCCCCCHHHHHHHHHHHH--
Q 028983           64 IFRSGFPDSA----NFSFLQTLRLRSIIYLCPEPYPEANTEFLKSNGIKLFQFAIEGHKEPFVNIPEDMIREALKVLL--  137 (201)
Q Consensus        64 Lyrsg~p~~~----~l~~L~~lGIktII~Lr~e~~~~~~~~~~~~~gi~~~~ipi~d~~~p~~~i~~~~i~~~l~~l~--  137 (201)
                      +.....|...    -++.|++.||++||+|+.+.+.   ...++..|++|+++|+.|...|.    .+.+.++++.+.  
T Consensus        11 fI~tq~P~~~t~~~f~~~l~~~~i~~Iv~l~e~~y~---~~~~~~~~i~~~~~~~~d~~~p~----~~~~~~~~~~~~~~   83 (152)
T d1rxda_          11 FLITHNPTNATLNKFIEELKKYGVTTIVRVCEATYD---TTLVEKEGIHVLDWPFDDGAPPS----NQIVDDWLSLVKIK   83 (152)
T ss_dssp             EEECCCCCGGGHHHHHHHHHHTTEEEEEECSCCCSC---CHHHHHTTCEEEECCC--CCCCC----HHHHHHHHHHHHHH
T ss_pred             EEEECCCCchhHHHHHHHHHHhCCeEEeecccccCC---chheeecceEEEEeeCCCCCCCC----HHHHHHHHHHHHHH
Confidence            3345567654    3577899999999999987553   34567789999999999987774    455555554443  


Q ss_pred             --ccCCCcEEEEcCCCCChHHHHHHHHHHHCCCCHHHHHHHHHHHhcCCC-CchhhhhHhhhcccC
Q 028983          138 --DVRNHPVLIHCKRGKHRTGCLVGCLRKLQKWCLSSVFDEYQRFAAAKA-RVSDQRGTRILSPAL  200 (201)
Q Consensus       138 --~~~~~pVLVHC~aG~~RTG~vva~~l~~~g~s~~~ai~ey~~~~~~~~-~~~~~~Fie~f~~~~  200 (201)
                        ...++||+|||++|.||||+++|+|++..||+.++|++.++.. |+++ ...|.+|++.|...+
T Consensus        84 ~~~~~~~~v~VHC~~G~gRsg~~~a~~l~~~~~~~~~av~~vr~~-R~~~i~~~Q~~fl~~y~~~~  148 (152)
T d1rxda_          84 FREEPGCCIAVHCVAGLGRAPVLVALALIEGGMKYEDAVQFIRQK-RRGAFNSKQLLYLEKYRPKM  148 (152)
T ss_dssp             HHHSTTCEEEEECSSSSTTHHHHHHHHHHHTTCCHHHHHHHHHTT-CTTCCCHHHHHHHHHCCCCC
T ss_pred             HHhCCCCCEEEEEcCCcccHHHHHHHHHHHhCcCHHHHHHHHHHh-CCCCCchHHHHHHHHHHHHH
Confidence              3468999999999999999999999999999999999988755 5544 336889999998654

>d1mkpa_ c.45.1.1 (A:) Mapk phosphatase {Human (Homo sapiens), pyst1 (mkp3) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: (Phosphotyrosine protein) phosphatases II
superfamily: (Phosphotyrosine protein) phosphatases II
family: Dual specificity phosphatase-like
domain: Mapk phosphatase
species: Human (Homo sapiens), pyst1 (mkp3) [TaxId: 9606]

Probab=99.86  E-value=1.2e-21  Score=149.61  Aligned_cols=131  Identities=14%  Similarity=0.085  Sum_probs=99.0

Q ss_pred             cccccceEecCCCChhhHHHHHhcCCcEEEEcCCCCCCCchHHHHhhCCcEEEEeeeCCCCCCCCCCCHHHHHHHHHHHH
Q 028983           58 SMVDNGIFRSGFPDSANFSFLQTLRLRSIIYLCPEPYPEANTEFLKSNGIKLFQFAIEGHKEPFVNIPEDMIREALKVLL  137 (201)
Q Consensus        58 ~~V~~~Lyrsg~p~~~~l~~L~~lGIktII~Lr~e~~~~~~~~~~~~~gi~~~~ipi~d~~~p~~~i~~~~i~~~l~~l~  137 (201)
                      ..|.|+||.|+...+.+.+.|+++||++|||++.+... .   +....++.|.++|+.|...+...-..+.+.++++...
T Consensus         5 ~eI~p~lylG~~~~a~~~~~l~~~gI~~Iin~~~~~~~-~---~~~~~~~~y~~~~~~D~~~~~i~~~~~~~~~~i~~~~   80 (144)
T d1mkpa_           5 VEILPFLYLGCAKDSTNLDVLEEFGIKYILNVTPNLPN-L---FENAGEFKYKQIPISDHWSQNLSQFFPEAISFIDEAR   80 (144)
T ss_dssp             EEEETTEEEECTTSCCCHHHHHHTTEEEEEECCSSCCC-E---EEEETTEEEEECCCCCSTTCCSGGGHHHHHHHHHHHH
T ss_pred             CeEECCEEECChhHhcCHHHHHhCCCcEEEEccccCCc-c---ccCCCceEEEEEEEecCCCCCHHHHHHHHHHHHHHhh
Confidence            46889999999999999999999999999999876321 1   1234689999999998755422111233333444433


Q ss_pred             ccCCCcEEEEcCCCCChHHHHHHHHHHH-CCCCHHHHHHHHHHHhcCCCCchhhhhHhh
Q 028983          138 DVRNHPVLIHCKRGKHRTGCLVGCLRKL-QKWCLSSVFDEYQRFAAAKARVSDQRGTRI  195 (201)
Q Consensus       138 ~~~~~pVLVHC~aG~~RTG~vva~~l~~-~g~s~~~ai~ey~~~~~~~~~~~~~~Fie~  195 (201)
                       ..+++|||||.+|.+|||+++++|||. .||+.++|++-++.. ++.+. .|..|+++
T Consensus        81 -~~~~~VlVHC~~G~~RS~~vv~aYLm~~~~~~~~~A~~~v~~~-Rp~i~-pn~~f~~q  136 (144)
T d1mkpa_          81 -GKNCGVLVHSLAGISRSVTVTVAYLMQKLNLSMNDAYDIVKMK-KSNIS-PNFNFMGQ  136 (144)
T ss_dssp             -HTTCEEEEECSSCSHHHHHHHHHHHHHHHTCCHHHHHHHHHHH-CTTCC-CCSTTHHH
T ss_pred             -hccceEEEEecccccchHHHHHHHHHHHhCCCHHHHHHHHHHH-CCCCC-CCHHHHHH
Confidence             378999999999999999999999985 699999999977755 66664 36666653

>d1m3ga_ c.45.1.1 (A:) Mapk phosphatase {Human (Homo sapiens), pac-1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: (Phosphotyrosine protein) phosphatases II
superfamily: (Phosphotyrosine protein) phosphatases II
family: Dual specificity phosphatase-like
domain: Mapk phosphatase
species: Human (Homo sapiens), pac-1 [TaxId: 9606]

Probab=99.84  E-value=2e-21  Score=149.10  Aligned_cols=128  Identities=10%  Similarity=0.033  Sum_probs=97.1

Q ss_pred             cccccceEecCCCChhhHHHHHhcCCcEEEEcCCCCCCCchHHHHhhCCcEEEEeeeCCCCCCCCCCCHHHHHHHHHHHH
Q 028983           58 SMVDNGIFRSGFPDSANFSFLQTLRLRSIIYLCPEPYPEANTEFLKSNGIKLFQFAIEGHKEPFVNIPEDMIREALKVLL  137 (201)
Q Consensus        58 ~~V~~~Lyrsg~p~~~~l~~L~~lGIktII~Lr~e~~~~~~~~~~~~~gi~~~~ipi~d~~~p~~~i~~~~i~~~l~~l~  137 (201)
                      ..|.|+||.|+.+.+.+.++|+++||++|||+..+.+. .     ...++.|+++|+.|.......-..+.+.++++...
T Consensus         5 ~eI~p~LylG~~~~a~~~~~L~~~gI~~Iin~~~~~~~-~-----~~~~~~y~~i~i~D~~~~~i~~~~~~~~~~i~~~~   78 (145)
T d1m3ga_           5 VEILPYLFLGSCSHSSDLQGLQACGITAVLNVSASCPN-H-----FEGLFRYKSIPVEDNQMVEISAWFQEAIGFIDWVK   78 (145)
T ss_dssp             EEETTTEEECCSTHHHHHHHHHHHTCSEEEECSSSSSE-E-----ECSSSEEEECCCCCSTTCCCTTSHHHHHHHHHHHH
T ss_pred             eEEECCEEEcChhhhcCHHHHHHcCCcEEEEecCCCCc-C-----CCCceEEEEEeccCCchhhHHHHHHHHHHHHHHhh
Confidence            36789999999999999999999999999999876321 1     12478999999998654322222344444554433


Q ss_pred             ccCCCcEEEEcCCCCChHHHHHHHHHHH-CCCCHHHHHHHHHHHhcCCCCchhhhhHh
Q 028983          138 DVRNHPVLIHCKRGKHRTGCLVGCLRKL-QKWCLSSVFDEYQRFAAAKARVSDQRGTR  194 (201)
Q Consensus       138 ~~~~~pVLVHC~aG~~RTG~vva~~l~~-~g~s~~~ai~ey~~~~~~~~~~~~~~Fie  194 (201)
                       .++++|||||.+|.+||++++++|+|. .||++++|++.++.. ++.+. .|..|+.
T Consensus        79 -~~~~~VlVHC~~G~sRS~~v~~aYLm~~~~~~~~~A~~~v~~~-Rp~v~-pn~~f~~  133 (145)
T d1m3ga_          79 -NSGGRVLVHSQAGISRSATICLAYLMQSRRVRLDEAFDFVKQR-RGVIS-PNFSFMG  133 (145)
T ss_dssp             -HTTCCEEECCSSSSSHHHHHHHHHHHHTTCCHHHHHHHHHSCS-CCCCS-SCSSCCC
T ss_pred             -ccCceEEEEcccccccHHHHHHHHHHHHhCCCHHHHHHHHHHH-CCCCC-CCHHHHH
Confidence             368999999999999999999999985 699999999966544 66564 3666665

>d1ywfa1 c.45.1.5 (A:4-275) Phosphotyrosine protein phosphatase PtpB {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: (Phosphotyrosine protein) phosphatases II
superfamily: (Phosphotyrosine protein) phosphatases II
family: Mycobacterial PtpB-like
domain: Phosphotyrosine protein phosphatase PtpB
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.81  E-value=7.5e-20  Score=153.70  Aligned_cols=117  Identities=22%  Similarity=0.347  Sum_probs=84.1

Q ss_pred             ccccc-eEecCCCC---hhhHHHHHhcCCcEEEEcCCC-C----CCCchHHHHhhCCcEEEEeeeCCCCCC-------C-
Q 028983           59 MVDNG-IFRSGFPD---SANFSFLQTLRLRSIIYLCPE-P----YPEANTEFLKSNGIKLFQFAIEGHKEP-------F-  121 (201)
Q Consensus        59 ~V~~~-Lyrsg~p~---~~~l~~L~~lGIktII~Lr~e-~----~~~~~~~~~~~~gi~~~~ipi~d~~~p-------~-  121 (201)
                      .|.+| ||||+.++   +.+++.|.++||++|||||+. |    .+...     ..|++++++|+......       . 
T Consensus        18 ~vr~g~l~RS~~l~~lt~~d~~~L~~lgI~tViDLRs~~E~~~~~~~~~-----~~~~~~~~~p~~~~~~~~~~~~~~~~   92 (272)
T d1ywfa1          18 ALRPGRLFRSSELSRLDDAGRATLRRLGITDVADLRSSREVARRGPGRV-----PDGIDVHLLPFPDLADDDADDSAPHE   92 (272)
T ss_dssp             TSCTTSEEEESCCTTCCHHHHHHHHHHTCCEEEECCCHHHHHHHCSCCC-----CTTCEEEECCCCCSCC----------
T ss_pred             cccCCceEecCCcCcCCHHHHHHHHHCCCcEEEECCCHHHHhhcCCCCC-----CCCceEEEecCcccccccccccchhh
Confidence            46678 99999986   578999999999999999985 1    11111     24889999998653110       0 


Q ss_pred             --------------------CCCCH--------------------HHHHHHHHHHHccCCCcEEEEcCCCCChHHHHHHH
Q 028983          122 --------------------VNIPE--------------------DMIREALKVLLDVRNHPVLIHCKRGKHRTGCLVGC  161 (201)
Q Consensus       122 --------------------~~i~~--------------------~~i~~~l~~l~~~~~~pVLVHC~aG~~RTG~vva~  161 (201)
                                          .....                    ..+..++..+  ..++|+||||++||||||+++|+
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~Y~~~~~~~~~~~~~~~~~~~~--~~~~pvL~HCtaGKDRTG~~aal  170 (272)
T d1ywfa1          93 TAFKRLLTNDGSNGESGESSQSINDAATRYMTDEYRQFPTRNGAQRALHRVVTLL--AAGRPVLTHCFAGKDRTGFVVAL  170 (272)
T ss_dssp             ---------------------CCCHHHHHHHHHHHHHGGGSTTHHHHHHHHHHHH--HTTCCEEEECSSSSSHHHHHHHH
T ss_pred             HHHHHHhhhccccchhhhhhhhhhhHHHHHHHHHHHHHHhcchHHHHHHHHHHHh--ccCCCEEEecCCCCcchHHHHHH
Confidence                                00000                    0011112221  36899999999999999999999


Q ss_pred             HHHHCCCCHHHHHHHHHHHhc
Q 028983          162 LRKLQKWCLSSVFDEYQRFAA  182 (201)
Q Consensus       162 ~l~~~g~s~~~ai~ey~~~~~  182 (201)
                      +|...|++.++|++||..++.
T Consensus       171 lL~llGV~~e~I~~DYllSn~  191 (272)
T d1ywfa1         171 VLEAVGLDRDVIVADYLRSND  191 (272)
T ss_dssp             HHHHTTCCHHHHHHHHHGGGG
T ss_pred             HHHHcCCCHHHHHHHHHhhhh
Confidence            999999999999999998754

>d1i9sa_ c.45.1.1 (A:) mRNA capping enzyme, triphosphatase domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: (Phosphotyrosine protein) phosphatases II
superfamily: (Phosphotyrosine protein) phosphatases II
family: Dual specificity phosphatase-like
domain: mRNA capping enzyme, triphosphatase domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.69  E-value=1.2e-16  Score=127.89  Aligned_cols=110  Identities=15%  Similarity=0.268  Sum_probs=82.8

Q ss_pred             hcCCcEEEEcCCCCCCCchHHHHhhCCcEEEEeeeCCCC-CCCCCCCHHHHHHHHHHHHc----cCCCcEEEEcCCCCCh
Q 028983           80 TLRLRSIIYLCPEPYPEANTEFLKSNGIKLFQFAIEGHK-EPFVNIPEDMIREALKVLLD----VRNHPVLIHCKRGKHR  154 (201)
Q Consensus        80 ~lGIktII~Lr~e~~~~~~~~~~~~~gi~~~~ipi~d~~-~p~~~i~~~~i~~~l~~l~~----~~~~pVLVHC~aG~~R  154 (201)
                      ..++..||||+.+... -....++..||+|+++|+.+.+ .|.    .+.+.++++.+..    ..+++|+|||.+|+||
T Consensus        54 ~~~~~~vinlt~~~~~-Y~~~~~~~~gi~~~~~~~~~~~~~P~----~~~~~~f~~~v~~~~~~~~~~~V~VHC~~G~~R  128 (194)
T d1i9sa_          54 KVKMSLLVDLTNTSRF-YDRNDIEKEGIKYIKLQCKGHGECPT----TENTETFIRLCERFNERSPPELIGVHCTHGFNR  128 (194)
T ss_dssp             TCCEEEEEECSSCSSS-SCTHHHHTTTCEEEECCCCCTTCCCC----HHHHHHHHHHHTTC-----CCEEEEECSSSSHH
T ss_pred             CCCceEEEEccCCCCC-cCHHHHHhcCceEEEecCCCCCCCCC----hHHHHHHHHHHHHHHHhCCCCeEEEECCCCCCc
Confidence            4678899999976321 1134567889999999998754 453    6777777776643    2478999999999999


Q ss_pred             HHHHHHHHHHH-CCCCHHHHHHHHHHHhcCCCCchhhhhHhhh
Q 028983          155 TGCLVGCLRKL-QKWCLSSVFDEYQRFAAAKARVSDQRGTRIL  196 (201)
Q Consensus       155 TG~vva~~l~~-~g~s~~~ai~ey~~~~~~~~~~~~~~Fie~f  196 (201)
                      ||+++++||+. .||+.++|++.++.. |+.+. .+..|++.+
T Consensus       129 sg~~i~ayL~~~~~~s~~~Ai~~~~~~-Rp~~i-~~~~~~~~L  169 (194)
T d1i9sa_         129 TGFLICAFLVEKMDWSIEAAVATFAQA-RPPGI-YKGDYLKEL  169 (194)
T ss_dssp             HHHHHHHHHHHHHCCCHHHHHHHHHHH-STTCC-CCHHHHHHH
T ss_pred             cHHHHHHHHHHHcCCCHHHHHHHHHHH-CCCCC-CCHHHHHHH
Confidence            99999999985 699999999988755 66553 467777644

>d1d5ra2 c.45.1.1 (A:14-187) Phoshphoinositide phosphatase Pten (Pten tumor suppressor), N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: (Phosphotyrosine protein) phosphatases II
superfamily: (Phosphotyrosine protein) phosphatases II
family: Dual specificity phosphatase-like
domain: Phoshphoinositide phosphatase Pten (Pten tumor suppressor), N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=1.1e-15  Score=119.81  Aligned_cols=134  Identities=25%  Similarity=0.358  Sum_probs=95.6

Q ss_pred             CccccccceEecCCCChh----------h-HHHHHh--cCCcEEEEcCCCCCCCchHHHHhhCCcEEEEeeeCCCCCCCC
Q 028983           56 NFSMVDNGIFRSGFPDSA----------N-FSFLQT--LRLRSIIYLCPEPYPEANTEFLKSNGIKLFQFAIEGHKEPFV  122 (201)
Q Consensus        56 nf~~V~~~Lyrsg~p~~~----------~-l~~L~~--lGIktII~Lr~e~~~~~~~~~~~~~gi~~~~ipi~d~~~p~~  122 (201)
                      .+.+|+++|+.++.|...          + ..+|+.  .+.-.|+||+.+...+.     ...+++++++|+.|...|. 
T Consensus        11 Dlt~It~riiv~~~P~~~~e~~~~~~i~~v~~~l~~~~~~~~~v~nl~~~~~y~~-----~~~~~~~~~~~~~d~~~Ps-   84 (174)
T d1d5ra2          11 DLTYIYPNIIAMGFPAERLEGVYRNNIDDVVRFLDSKHKNHYKIYNLCAERHYDT-----AKFNCRVAQYPFEDHNPPQ-   84 (174)
T ss_dssp             SEEEEETTEEEECCCBSSCCTTCCCBHHHHHHHHHHHSSSCEEEEEEESSCCCCT-----TSCSSCEEEEEECTTSCCC-
T ss_pred             ceeEEeCCEEEEeCCCCCcHHhhcCCHHHHHHHHHhccCCcEEEEecccCCCCCh-----HHcCCeEEEeCCCCCCCcC-
Confidence            456789998888888532          1 244443  45667889876522111     1247899999999998885 


Q ss_pred             CCCHHHHHHHHHHHHc----cCCCcEEEEcCCCCChHHHHHHHHHHHC-C-CCHHHHHHHHHHHhc--CCC--Cchhhhh
Q 028983          123 NIPEDMIREALKVLLD----VRNHPVLIHCKRGKHRTGCLVGCLRKLQ-K-WCLSSVFDEYQRFAA--AKA--RVSDQRG  192 (201)
Q Consensus       123 ~i~~~~i~~~l~~l~~----~~~~pVLVHC~aG~~RTG~vva~~l~~~-g-~s~~~ai~ey~~~~~--~~~--~~~~~~F  192 (201)
                         .+.+.++++.+..    ..+++|+|||++|+||||+++|+||+.. + .+.++|++-++....  ++.  .++|.+|
T Consensus        85 ---~~~i~~~~~~~~~~~~~~~~~~v~VHC~~G~gRSg~~~~ayL~~~~~~~~~~~al~~~~~~R~~~~~~v~~psQ~ry  161 (174)
T d1d5ra2          85 ---LELIKPFCEDLDQWLSEDDNHVAAIHCKAGKGRTGVMICAYLLHRGKFLKAQEALDFYGEVRTRDKKGVTIPSQRRY  161 (174)
T ss_dssp             ---HHHHHHHHHHHHHHHTTTSCSEEEEECSSSSHHHHHHHHHHHHHHTSCSSHHHHHHHHHHHHCSSSCSSCSHHHHHH
T ss_pred             ---HHHHHHHHHHHHHHhccCCCCEEEEEeCCCcchhHHHHHHHHHHHcCCCCHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence               5666666665532    3468899999999999999999999976 4 389999987776642  222  3579999


Q ss_pred             Hhhhcc
Q 028983          193 TRILSP  198 (201)
Q Consensus       193 ie~f~~  198 (201)
                      ++.|.-
T Consensus       162 l~yf~~  167 (174)
T d1d5ra2         162 VYYYSY  167 (174)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            998863

>d2pt0a1 c.45.1.4 (A:34-346) Myo-inositol hexaphosphate phosphohydrolase (phytase) PhyA {Selenomonas ruminantium [TaxId: 971]}

class: Alpha and beta proteins (a/b)
fold: (Phosphotyrosine protein) phosphatases II
superfamily: (Phosphotyrosine protein) phosphatases II
family: Myo-inositol hexaphosphate phosphohydrolase (phytase) PhyA
domain: Myo-inositol hexaphosphate phosphohydrolase (phytase) PhyA
species: Selenomonas ruminantium [TaxId: 971]

Probab=99.23  E-value=1.4e-11  Score=104.85  Aligned_cols=77  Identities=19%  Similarity=0.291  Sum_probs=66.0

Q ss_pred             hHHHHhhCCcEEEEeeeCCCCCCCCCCCHHHHHHHHHHHHc-cCCCcEEEEcCCCCChHHHHHHHHHHH--CCCCHHHHH
Q 028983           98 NTEFLKSNGIKLFQFAIEGHKEPFVNIPEDMIREALKVLLD-VRNHPVLIHCKRGKHRTGCLVGCLRKL--QKWCLSSVF  174 (201)
Q Consensus        98 ~~~~~~~~gi~~~~ipi~d~~~p~~~i~~~~i~~~l~~l~~-~~~~pVLVHC~aG~~RTG~vva~~l~~--~g~s~~~ai  174 (201)
                      +.+.++..|++|+++|+.|+..|.    .+.+..+++++.+ ..++|++|||.+|+||||+++++|++.  .+++.++|+
T Consensus       172 e~~~~e~~g~~Y~ripi~D~~~P~----~~~id~~i~~i~~~~~~~~ivvhc~~g~~rt~~~~~~~~~~~~~~~~~~d~i  247 (313)
T d2pt0a1         172 EQEVAEAAGMRYFRIAATDHVWPT----PENIDRFLAFYRTLPQDAWLHFHCEAGVGRTTAFMVMTDMLKNPSVSLKDIL  247 (313)
T ss_dssp             HHHHHHHTTCEEEEEEECTTSCCC----HHHHHHHHHHHHTCCTTCEEEEECSSSSHHHHHHHHHHHHHHCTTSCHHHHH
T ss_pred             HHHHHHhhCceEEEecCCCCCCCC----HHHHHHHHHHHHhCCCCCCEEEECCCCCcHHHHHHHHHHHHHccCCCHHHHH
Confidence            456778899999999999999985    6889999998876 457899999999999999999999875  478999999


Q ss_pred             HHHH
Q 028983          175 DEYQ  178 (201)
Q Consensus       175 ~ey~  178 (201)
                      +.-.
T Consensus       248 ~rq~  251 (313)
T d2pt0a1         248 YRQH  251 (313)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            7433

>d1g4us2 c.45.1.2 (S:297-539) SptP tyrosine phosphatase, catalytic domain {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: (Phosphotyrosine protein) phosphatases II
superfamily: (Phosphotyrosine protein) phosphatases II
family: Higher-molecular-weight phosphotyrosine protein phosphatases
domain: SptP tyrosine phosphatase, catalytic domain
species: Salmonella typhimurium [TaxId: 90371]

Probab=98.63  E-value=6.1e-08  Score=78.59  Aligned_cols=72  Identities=17%  Similarity=0.213  Sum_probs=50.2

Q ss_pred             HHHHHHHHHHHHcc-----------CCCcEEEEcCCCCChHHHHHHHHHHH--CCCCHHHHHHHHHHHhcCCCCchhhhh
Q 028983          126 EDMIREALKVLLDV-----------RNHPVLIHCKRGKHRTGCLVGCLRKL--QKWCLSSVFDEYQRFAAAKARVSDQRG  192 (201)
Q Consensus       126 ~~~i~~~l~~l~~~-----------~~~pVLVHC~aG~~RTG~vva~~l~~--~g~s~~~ai~ey~~~~~~~~~~~~~~F  192 (201)
                      .+.+..+++.+...           ..+|++|||.+|.||||+++|+..+.  ..++..+++.++|..+.+......+||
T Consensus       152 ~~~l~~li~~v~~~~~~~~~~~~~~~~~PivVHCsaGvGRTGtf~a~~~l~~~~~vdv~~iv~~lR~qR~~~mVqt~~QY  231 (243)
T d1g4us2         152 TDQLEYLADRVKNSNQNGAPGRSSSDKHLPMIHCLGGVGRTGTMAAALVLKDNPHSNLEQVRADFRDSRNNRMLEDASQF  231 (243)
T ss_dssp             HHHHHHHHHHHHC-------------CCCEEEECSSSSSHHHHHHHHHHHHHCTTCCHHHHHHHHHTTSCTTTTCCHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhhcccCCCCCCEEEEECCCCCcchHHHHHHHHHhcCCCCHHHHHHHHHhcCCCCCCCCHHHH
Confidence            55666676666431           25799999999999999999987764  368888999988877333333345666


Q ss_pred             Hhhhc
Q 028983          193 TRILS  197 (201)
Q Consensus       193 ie~f~  197 (201)
                      .-.++
T Consensus       232 ~flY~  236 (243)
T d1g4us2         232 VQLKA  236 (243)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            54443

>d1wcha_ c.45.1.2 (A:) Tyrosine-protein phosphatase, non-receptor type 13 (PTPL1) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: (Phosphotyrosine protein) phosphatases II
superfamily: (Phosphotyrosine protein) phosphatases II
family: Higher-molecular-weight phosphotyrosine protein phosphatases
domain: Tyrosine-protein phosphatase, non-receptor type 13 (PTPL1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.47  E-value=4.6e-07  Score=75.98  Aligned_cols=67  Identities=16%  Similarity=0.227  Sum_probs=48.2

Q ss_pred             HHHHHHHHHHHHc-cCCCcEEEEcCCCCChHHHHHHHHHHH------CCCCHHHHHHHHHHHhcCCCCchhhhhH
Q 028983          126 EDMIREALKVLLD-VRNHPVLIHCKRGKHRTGCLVGCLRKL------QKWCLSSVFDEYQRFAAAKARVSDQRGT  193 (201)
Q Consensus       126 ~~~i~~~l~~l~~-~~~~pVLVHC~aG~~RTG~vva~~l~~------~g~s~~~ai~ey~~~~~~~~~~~~~~Fi  193 (201)
                      ...+.++++.+.. ..++||+|||.+|.||||+++|+..++      ..++.-+++..++.. |+.......+|.
T Consensus       216 ~~~~l~~l~~v~~~~~~~PivVHCsaGvGRtG~fia~d~~l~~l~~~~~vdv~~~v~~lR~q-R~~~Vqt~~QY~  289 (308)
T d1wcha_         216 PDDLLTFISYMRHIHRSGPIITHCSAGIGRSGTLICIDVVLGLISQDLDFDISDLVRCMRLQ-RHGMVQTEDQYI  289 (308)
T ss_dssp             HHHHHHHHHHHHHHCCSSCEEEECSSSSHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHTT-STTCSCSHHHHH
T ss_pred             chhHHHHHHHHHHhccCCcEEEEeccccchhHHHHHHHHHHHHHHccCCCCHHHHHHHHHhh-CcccCCCHHHHH
Confidence            4566667777654 467899999999999999999866542      367788888877755 555544455554

>d1lyva_ c.45.1.2 (A:) Protein-tyrosine phosphatase YopH, catalytic domain {Yersinia enterocolitica [TaxId: 630]}

class: Alpha and beta proteins (a/b)
fold: (Phosphotyrosine protein) phosphatases II
superfamily: (Phosphotyrosine protein) phosphatases II
family: Higher-molecular-weight phosphotyrosine protein phosphatases
domain: Protein-tyrosine phosphatase YopH, catalytic domain
species: Yersinia enterocolitica [TaxId: 630]

Probab=98.31  E-value=1.5e-06  Score=71.57  Aligned_cols=58  Identities=14%  Similarity=0.197  Sum_probs=42.3

Q ss_pred             CCCcEEEEcCCCCChHHHHHHHHHHH----CCCCHHHHHHHHHHHhcCCCCchhhhhHhhhc
Q 028983          140 RNHPVLIHCKRGKHRTGCLVGCLRKL----QKWCLSSVFDEYQRFAAAKARVSDQRGTRILS  197 (201)
Q Consensus       140 ~~~pVLVHC~aG~~RTG~vva~~l~~----~g~s~~~ai~ey~~~~~~~~~~~~~~Fie~f~  197 (201)
                      ..+|++|||.+|.||||+++|++...    ..++..+++..++.-+.+.-....+||.-.++
T Consensus       210 ~~~PivVHCs~GvGRtGtfia~~~~~~~~~~~vdv~~~v~~lR~qR~~~mVqt~~QY~fly~  271 (283)
T d1lyva_         210 SKLRPVIHSRAGVGRTAQLIGAMCMNDSRNSQLSVEDMVSQMRVQRNGIMVQKDEQLDVLIK  271 (283)
T ss_dssp             TSSCCEEECSSSSSHHHHHHHHHHHTCGGGTTCCHHHHHHHHHHHTCTTSSCSHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCcHHHHHHHHHHHHHhccCCCCHHHHHHHHHhcCCCCCCCCHHHHHHHHH
Confidence            45799999999999999998876653    36788899998887733333335566655444

>d1jlna_ c.45.1.2 (A:) Tyrosine phosphatase {Mouse (Mus musculus), ptp-sl/br7 [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: (Phosphotyrosine protein) phosphatases II
superfamily: (Phosphotyrosine protein) phosphatases II
family: Higher-molecular-weight phosphotyrosine protein phosphatases
domain: Tyrosine phosphatase
species: Mouse (Mus musculus), ptp-sl/br7 [TaxId: 10090]

Probab=98.30  E-value=1.4e-06  Score=72.44  Aligned_cols=66  Identities=15%  Similarity=0.190  Sum_probs=45.4

Q ss_pred             HHHHHHHHHHHc-----cCCCcEEEEcCCCCChHHHHHHHHHHH------CCCCHHHHHHHHHHHhcCCCCchhhhhH
Q 028983          127 DMIREALKVLLD-----VRNHPVLIHCKRGKHRTGCLVGCLRKL------QKWCLSSVFDEYQRFAAAKARVSDQRGT  193 (201)
Q Consensus       127 ~~i~~~l~~l~~-----~~~~pVLVHC~aG~~RTG~vva~~l~~------~g~s~~~ai~ey~~~~~~~~~~~~~~Fi  193 (201)
                      ..+.+++..+..     ...+||+|||.+|.||||+++|+...+      ..++.-+++...+.. |+......+||.
T Consensus       203 ~~~l~~i~~v~~~~~~~~~~~PivVHCsaGvGRtG~fial~~~l~~l~~~~~vdv~~~v~~lR~q-R~~~Vqt~~QY~  279 (297)
T d1jlna_         203 QPLLQLMLDVEEDRLASEGRGPVVVHCSAGIGRTGCFIATSIGCQQLKEEGVVDALSIVCQLRVD-RGGMVQTSEQYE  279 (297)
T ss_dssp             HHHHHHHHHHHHHHHTCTTSCCEEEESSSSSHHHHHHHHHHHHHHHHHHHSEECHHHHHHHHHHH-STTSSCSHHHHH
T ss_pred             HHHHHHHHHHHHHHhcccCCCceEEEecccccchhHHHHHHHHHHHHhhcCCCCHHHHHHHHHhh-cccccCCHHHHH
Confidence            344445555432     246899999999999999999866553      357778888888766 555543444543

>d1lara1 c.45.1.2 (A:1307-1623) RPTP Lar {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: (Phosphotyrosine protein) phosphatases II
superfamily: (Phosphotyrosine protein) phosphatases II
family: Higher-molecular-weight phosphotyrosine protein phosphatases
domain: RPTP Lar
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.29  E-value=1.4e-06  Score=73.02  Aligned_cols=66  Identities=17%  Similarity=0.233  Sum_probs=46.4

Q ss_pred             HHHHHHHHHHHc---cCCCcEEEEcCCCCChHHHHHHHHHHH------CCCCHHHHHHHHHHHhcCCCCchhhhhH
Q 028983          127 DMIREALKVLLD---VRNHPVLIHCKRGKHRTGCLVGCLRKL------QKWCLSSVFDEYQRFAAAKARVSDQRGT  193 (201)
Q Consensus       127 ~~i~~~l~~l~~---~~~~pVLVHC~aG~~RTG~vva~~l~~------~g~s~~~ai~ey~~~~~~~~~~~~~~Fi  193 (201)
                      ..+.++++.+..   ...+||+|||.+|.||||+++|+...+      .-++..+++..++.. |+......++|.
T Consensus       192 ~~~l~~i~~v~~~~~~~~~PivVHCs~GvGRtG~f~al~~~~~~l~~~~~vdv~~~v~~lR~q-R~~~V~t~~QY~  266 (317)
T d1lara1         192 TPILAFLRRVKACNPLDAGPMVVHCSAGVGRTGCFIVIDAMLERMKHEKTVDIYGHVTCMRSQ-RNYMVQTEDQYV  266 (317)
T ss_dssp             HHHHHHHHHHHHHSCTTCCCEEEESSSSSSHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHTT-STTSSCSHHHHH
T ss_pred             HHHHHHHHHHHHhhcCCCCcEEEEecccccceeeeehhHhHHHHHhcCCCCCHHHHHHHHHhh-cccccCCHHHHH
Confidence            455556666543   347899999999999999999865432      368888999888866 554544455553

>d1l8ka_ c.45.1.2 (A:) Tyrosine phosphatase {Human (Homo sapiens), T-cell [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: (Phosphotyrosine protein) phosphatases II
superfamily: (Phosphotyrosine protein) phosphatases II
family: Higher-molecular-weight phosphotyrosine protein phosphatases
domain: Tyrosine phosphatase
species: Human (Homo sapiens), T-cell [TaxId: 9606]

Probab=98.28  E-value=1.3e-06  Score=71.51  Aligned_cols=67  Identities=15%  Similarity=0.173  Sum_probs=45.4

Q ss_pred             HHHHHHHHHHHc-----cCCCcEEEEcCCCCChHHHHHHHHHHH------CCCCHHHHHHHHHHHhcCCCCchhhhhHh
Q 028983          127 DMIREALKVLLD-----VRNHPVLIHCKRGKHRTGCLVGCLRKL------QKWCLSSVFDEYQRFAAAKARVSDQRGTR  194 (201)
Q Consensus       127 ~~i~~~l~~l~~-----~~~~pVLVHC~aG~~RTG~vva~~l~~------~g~s~~~ai~ey~~~~~~~~~~~~~~Fie  194 (201)
                      ..+..++..+..     ...+||+|||.+|.||||+++|+...+      ..++..+++...+.. |+.......+|.=
T Consensus       186 ~~~~~l~~~v~~~~~~~~~~~PivVHCs~GvgRtGtf~al~~~~~~l~~~~~vdv~~~v~~lR~q-R~~~Vqt~~QY~f  263 (273)
T d1l8ka_         186 ASFLNFLFKVRESGSLNPDHGPAVIHCSAGIGRSGTFSLVDTCLVLMEKGDDINIKQVLLNMRKY-RMGLIQTPDQLRF  263 (273)
T ss_dssp             HHHHHHHHHHHHTTTTSTTSCCEEEEESSSSSHHHHHHHHHHHHHHSSSSCCCCHHHHHHHHTTT-BTTCSCSHHHHHH
T ss_pred             HHHHHHHHHHHHhhccCCCCceEEEEecccccceehHHHHHHHHHHHHhCCCcCHHHHHHHHHHh-cccccCCHHHHHH
Confidence            344445554433     235799999999999999999876553      357788888877755 5555445555543

>d1rpma_ c.45.1.2 (A:) Tyrosine phosphatase {Human (Homo sapiens), mu [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: (Phosphotyrosine protein) phosphatases II
superfamily: (Phosphotyrosine protein) phosphatases II
family: Higher-molecular-weight phosphotyrosine protein phosphatases
domain: Tyrosine phosphatase
species: Human (Homo sapiens), mu [TaxId: 9606]

Probab=98.28  E-value=1.1e-06  Score=72.23  Aligned_cols=69  Identities=16%  Similarity=0.219  Sum_probs=48.0

Q ss_pred             HHHHHHHHHHHc---cCCCcEEEEcCCCCChHHHHHHHHHHH------CCCCHHHHHHHHHHHhcCCCCchhhhhHhhh
Q 028983          127 DMIREALKVLLD---VRNHPVLIHCKRGKHRTGCLVGCLRKL------QKWCLSSVFDEYQRFAAAKARVSDQRGTRIL  196 (201)
Q Consensus       127 ~~i~~~l~~l~~---~~~~pVLVHC~aG~~RTG~vva~~l~~------~g~s~~~ai~ey~~~~~~~~~~~~~~Fie~f  196 (201)
                      ..+.++++.+..   ...+||+|||.+|.||||+++++...+      .-.+.-+++...+.. |+.....-.+|.=.+
T Consensus       193 ~~~l~~i~~v~~~~~~~~~PivVHCs~G~gRsG~f~al~~~~~~l~~~~~vdv~~~v~~lR~q-R~~~V~t~~QY~f~y  270 (278)
T d1rpma_         193 TGLLGFVRQVKSKSPPSAGPLVVHCSAGAGRTGCFIVIDIMLDMAEREGVVDIYNCVRELRSR-RVNMVQTEEQYVFIH  270 (278)
T ss_dssp             HHHHHHHHHHHHHSCTTSCCEEEESSSSSHHHHHHHHHHHHHHHHHHHSEECHHHHHHHHHHH-STTSSCSHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCCCCEEEEeCCCchhhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHhh-cccccCCHHHHHHHH
Confidence            455556666543   246899999999999999999866542      346788898888866 655544555555443

>d2shpa1 c.45.1.2 (A:219-525) Tyrosine phosphatase {Human (Homo sapiens), shp-2 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: (Phosphotyrosine protein) phosphatases II
superfamily: (Phosphotyrosine protein) phosphatases II
family: Higher-molecular-weight phosphotyrosine protein phosphatases
domain: Tyrosine phosphatase
species: Human (Homo sapiens), shp-2 [TaxId: 9606]

Probab=98.27  E-value=2e-06  Score=71.79  Aligned_cols=67  Identities=13%  Similarity=0.184  Sum_probs=45.0

Q ss_pred             HHHHHHHHHHHHc-----cCCCcEEEEcCCCCChHHHHHHHHHH---H--CC----CCHHHHHHHHHHHhcCCCCchhhh
Q 028983          126 EDMIREALKVLLD-----VRNHPVLIHCKRGKHRTGCLVGCLRK---L--QK----WCLSSVFDEYQRFAAAKARVSDQR  191 (201)
Q Consensus       126 ~~~i~~~l~~l~~-----~~~~pVLVHC~aG~~RTG~vva~~l~---~--~g----~s~~~ai~ey~~~~~~~~~~~~~~  191 (201)
                      ...+.+++..+..     ...+||+|||.+|.||||+++|+...   +  .|    ++.-+++...+.. |+......++
T Consensus       214 ~~~ll~li~~v~~~~~~~~~~~PivVHCs~GvgRtGtfia~~~~l~~l~~~~~~~~vdv~~~V~~lR~q-R~~~Vqt~~Q  292 (307)
T d2shpa1         214 PGGVLDFLEEVHHKQESIMDAGPVVVHCSAGIGRTGTFIVIDILIDIIREKGVDCDIDVPKTIQMVRSQ-RSGMVQTEAQ  292 (307)
T ss_dssp             HHHHHHHHHHHHHHHHHSTTCCCEEEECSSSSHHHHHHHHHHHHHHHHHHHCTTSEECHHHHHHHHHTT-STTSSCCHHH
T ss_pred             hHHHHHHHHHHHHHhhcccCCCCEEEEeCCCCcHHHHHHHHHHHHHHHHHcCCCCccCHHHHHHHHHhh-cccccCCHHH
Confidence            4555556665532     24689999999999999999886433   1  24    5777888888866 5555444555


Q ss_pred             hH
Q 028983          192 GT  193 (201)
Q Consensus       192 Fi  193 (201)
                      |.
T Consensus       293 Y~  294 (307)
T d2shpa1         293 YR  294 (307)
T ss_dssp             HH
T ss_pred             HH
Confidence            54

>d1yfoa_ c.45.1.2 (A:) Tyrosine phosphatase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: (Phosphotyrosine protein) phosphatases II
superfamily: (Phosphotyrosine protein) phosphatases II
family: Higher-molecular-weight phosphotyrosine protein phosphatases
domain: Tyrosine phosphatase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.25  E-value=9.1e-07  Score=73.09  Aligned_cols=69  Identities=19%  Similarity=0.154  Sum_probs=47.6

Q ss_pred             HHHHHHHHHHHc---cCCCcEEEEcCCCCChHHHHHHHHHHH------CCCCHHHHHHHHHHHhcCCCCchhhhhHhhh
Q 028983          127 DMIREALKVLLD---VRNHPVLIHCKRGKHRTGCLVGCLRKL------QKWCLSSVFDEYQRFAAAKARVSDQRGTRIL  196 (201)
Q Consensus       127 ~~i~~~l~~l~~---~~~~pVLVHC~aG~~RTG~vva~~l~~------~g~s~~~ai~ey~~~~~~~~~~~~~~Fie~f  196 (201)
                      ..+.++++.+..   ..++||+|||.+|.||||+++|+...+      ..++..+++..++.. |+.......+|.=.+
T Consensus       202 ~~~l~l~~~v~~~~~~~~~PivVHCs~G~gRtG~f~al~~~~~~l~~~~~vdv~~~v~~lR~q-R~~~V~t~~QY~f~y  279 (288)
T d1yfoa_         202 IGMLKFLKKVKACNPQYAGAIVVHCSAGVGRTGTFVVIDAMLDMMHSERKVDVYGFVSRIRAQ-RCQMVQTDMQYVFIY  279 (288)
T ss_dssp             HHHHHHHHHHHHHSCTTSCCEEEECSSSSHHHHHHHHHHHHHHHHHHSSEECHHHHHHHHTTT-STTSSCSHHHHHHHH
T ss_pred             HHHHHHHHHHHHhccccCCcEEEEeCCCCcccHHHHHHHHHHHHHHhCCCCCHHHHHHHHHhh-ccccCCCHHHHHHHH
Confidence            445556665543   347899999999999999999876553      357788888888766 555544555555433

>d1p15a_ c.45.1.2 (A:) Protein-tyrosine phosphatase alpha {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: (Phosphotyrosine protein) phosphatases II
superfamily: (Phosphotyrosine protein) phosphatases II
family: Higher-molecular-weight phosphotyrosine protein phosphatases
domain: Protein-tyrosine phosphatase alpha
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.19  E-value=2.7e-06  Score=68.49  Aligned_cols=52  Identities=19%  Similarity=0.257  Sum_probs=38.0

Q ss_pred             CCCcEEEEcCCCCChHHHHHHHHHHH------CCCCHHHHHHHHHHHhcCCCCchhhhh
Q 028983          140 RNHPVLIHCKRGKHRTGCLVGCLRKL------QKWCLSSVFDEYQRFAAAKARVSDQRG  192 (201)
Q Consensus       140 ~~~pVLVHC~aG~~RTG~vva~~l~~------~g~s~~~ai~ey~~~~~~~~~~~~~~F  192 (201)
                      .++||+|||.+|.||||+++++....      .-++..+++...+.. |+.....-.+|
T Consensus       175 ~~~PivVHCs~G~gRsg~f~a~~~~~~~l~~~~~vdv~~~v~~lR~q-R~~~vqt~~QY  232 (245)
T d1p15a_         175 GNHPITVHCSAGAGRTGTFCALSTVLERVKAEGILDVFQTVKSLRLQ-RPHMVQTLEQY  232 (245)
T ss_dssp             TSCCEEEESSSSSHHHHHHHHHHHHHHHHHHHSCCCTTHHHHHHHTT-STTSSCSTTTT
T ss_pred             CCCCEEEEcCCCCccccHHHHHHHHHHHHHcCCCcCHHHHHHHHHHh-cccccCCHHHH
Confidence            46899999999999999999865442      357788888888866 55443333333

>d1fpra_ c.45.1.2 (A:) Tyrosine phosphatase {Human (Homo sapiens), shp-1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: (Phosphotyrosine protein) phosphatases II
superfamily: (Phosphotyrosine protein) phosphatases II
family: Higher-molecular-weight phosphotyrosine protein phosphatases
domain: Tyrosine phosphatase
species: Human (Homo sapiens), shp-1 [TaxId: 9606]

Probab=98.18  E-value=2.9e-06  Score=69.81  Aligned_cols=65  Identities=11%  Similarity=0.123  Sum_probs=42.8

Q ss_pred             HHHHHHHHHHHc-----cCCCcEEEEcCCCCChHHHHHHHHHH---H--CC----CCHHHHHHHHHHHhcCCCCchhhhh
Q 028983          127 DMIREALKVLLD-----VRNHPVLIHCKRGKHRTGCLVGCLRK---L--QK----WCLSSVFDEYQRFAAAKARVSDQRG  192 (201)
Q Consensus       127 ~~i~~~l~~l~~-----~~~~pVLVHC~aG~~RTG~vva~~l~---~--~g----~s~~~ai~ey~~~~~~~~~~~~~~F  192 (201)
                      ..+.+++..+..     ...+||+|||.+|.||||+++|+...   +  .+    ++.-+++...+.. |+.....-.+|
T Consensus       185 ~~~l~l~~~v~~~~~~~~~~~PivVHCs~G~gRtG~fial~~~~~~l~~~~~~~~vdv~~~v~~lR~q-R~~~V~t~~QY  263 (284)
T d1fpra_         185 GGVLSFLDQINQRQESLPHAGPIIVHSSAGIGRTGTIIVIDMLMENISTKGLDCDIDIQKTIQMVRAQ-RSGMVQTEAQY  263 (284)
T ss_dssp             HHHHHHHHHHHHHHTTSTTCCCEEEESSBSSHHHHHHHHHHHHHHHHHHHCTTSCCCHHHHHHHHHTT-STTSSCSSHHH
T ss_pred             HHHHHHHHHHHHHHhhcCCCCCEEEEeCCCCccchHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHhh-CccccCCHHHH
Confidence            444556555532     13579999999999999999986543   1  23    6777888877765 55443334443

>d2f71a1 c.45.1.2 (A:2-298) Tyrosine phosphatase {Human (Homo sapiens), 1B [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: (Phosphotyrosine protein) phosphatases II
superfamily: (Phosphotyrosine protein) phosphatases II
family: Higher-molecular-weight phosphotyrosine protein phosphatases
domain: Tyrosine phosphatase
species: Human (Homo sapiens), 1B [TaxId: 9606]

Probab=98.15  E-value=3e-06  Score=70.21  Aligned_cols=67  Identities=16%  Similarity=0.184  Sum_probs=44.4

Q ss_pred             HHHHHHHHHHHHc-----cCCCcEEEEcCCCCChHHHHHHHHH----HH-----CCCCHHHHHHHHHHHhcCCCCchhhh
Q 028983          126 EDMIREALKVLLD-----VRNHPVLIHCKRGKHRTGCLVGCLR----KL-----QKWCLSSVFDEYQRFAAAKARVSDQR  191 (201)
Q Consensus       126 ~~~i~~~l~~l~~-----~~~~pVLVHC~aG~~RTG~vva~~l----~~-----~g~s~~~ai~ey~~~~~~~~~~~~~~  191 (201)
                      ...+..++..+..     ...+||+|||.+|.||||+++|+..    +.     ..++..+++..++.. |+.......+
T Consensus       187 ~~~~l~l~~~v~~~~~~~~~~~PivVHCs~G~gRtGtf~ald~~~~~l~~~~~~~~vdV~~~v~~lR~q-R~~~Vqt~~Q  265 (297)
T d2f71a1         187 PASFLNFLFKVRESGSLSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKRKDPSSVDIKKVLLEMRKF-RMGLIQTADQ  265 (297)
T ss_dssp             HHHHHHHHHHHHHTTTTCTTSCCEEEECSSSSHHHHHHHHHHHHHHHHHHHTCGGGCCHHHHHHHHTTT-STTCSCSHHH
T ss_pred             HHHHHHHHHHHHHhhccCCCCceEEEeeccccCceehhHHHHHHHHHHHhhcCCCccCHHHHHHHHHhh-cccccCCHHH
Confidence            4455556665543     2357999999999999999998632    21     136778888877755 5555445555


Q ss_pred             hH
Q 028983          192 GT  193 (201)
Q Consensus       192 Fi  193 (201)
                      |.
T Consensus       266 Y~  267 (297)
T d2f71a1         266 LR  267 (297)
T ss_dssp             HH
T ss_pred             HH
Confidence            54

>d1lara2 c.45.1.2 (A:1628-1876) RPTP Lar {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: (Phosphotyrosine protein) phosphatases II
superfamily: (Phosphotyrosine protein) phosphatases II
family: Higher-molecular-weight phosphotyrosine protein phosphatases
domain: RPTP Lar
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.00  E-value=1.2e-05  Score=64.71  Aligned_cols=65  Identities=12%  Similarity=0.174  Sum_probs=42.5

Q ss_pred             HHHHHHHHHHHc-----cCCCcEEEEcCCCCChHHHHHHHHHHH------CCCCHHHHHHHHHHHhcCCCCchhhhh
Q 028983          127 DMIREALKVLLD-----VRNHPVLIHCKRGKHRTGCLVGCLRKL------QKWCLSSVFDEYQRFAAAKARVSDQRG  192 (201)
Q Consensus       127 ~~i~~~l~~l~~-----~~~~pVLVHC~aG~~RTG~vva~~l~~------~g~s~~~ai~ey~~~~~~~~~~~~~~F  192 (201)
                      ..+.+++..+..     ...+||+|||.+|.||||+++++...+      .-++..+++...+.. |+.....-.+|
T Consensus       160 ~~~~~li~~v~~~~~~~~~~~pivVhc~~G~gRsg~f~~~~~~~~~l~~~~~vdv~~~v~~lR~q-R~~~v~~~~Qy  235 (249)
T d1lara2         160 EGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGRTGVFITLSIVLERMRYEGVVDMFQTVKTLRTQ-RPAMVQTEDQY  235 (249)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCSCEEEESSSSSSHHHHHHHHHHHHHHHHHHSEECHHHHHHHHTTT-STTSSCSHHHH
T ss_pred             HHHHHHHHHHHHhhhhcCCCCcEEEECCCCCeeehHHHHHHHHHHHHHcCCCCCHHHHHHHHHhh-cccccCCHHHH
Confidence            344445554432     257899999999999999998865432      236677888877655 55453344444

>d1tq1a_ c.46.1.3 (A:) Thiosulfate sulfurtransferase/Senescence-associated protein {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Single-domain sulfurtransferase
domain: Thiosulfate sulfurtransferase/Senescence-associated protein
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.41  E-value=0.012  Score=41.21  Aligned_cols=84  Identities=8%  Similarity=0.018  Sum_probs=44.8

Q ss_pred             hHHHHHhcCCcEEEEcCCCCCCCchHHHHhhCCcE-EEEeeeCCCCCCCCCCCHHHHHHHHHHHHccCCCcEEEEcCCCC
Q 028983           74 NFSFLQTLRLRSIIYLCPEPYPEANTEFLKSNGIK-LFQFAIEGHKEPFVNIPEDMIREALKVLLDVRNHPVLIHCKRGK  152 (201)
Q Consensus        74 ~l~~L~~lGIktII~Lr~e~~~~~~~~~~~~~gi~-~~~ipi~d~~~p~~~i~~~~i~~~l~~l~~~~~~pVLVHC~aG~  152 (201)
                      ....|.+.|. .+||+|++.      ++. ...|. -+++|+.+..........+.+.+....+  .++.+|+|+|.+|.
T Consensus        14 ~a~~l~~~g~-~liDvR~~~------e~~-~ghi~ga~~ip~~~~~~~~~~~~~~~~~~~~~~~--~~~~~iv~~C~~G~   83 (119)
T d1tq1a_          14 VAHDLLLAGH-RYLDVRTPE------EFS-QGHACGAINVPYMNRGASGMSKNTDFLEQVSSHF--GQSDNIIVGCQSGG   83 (119)
T ss_dssp             HHHHHHHHTC-CEEEESCHH------HHH-HCCBTTBEECCSCCCSTTTCCCTTTHHHHHTTTC--CTTSSEEEEESSCS
T ss_pred             HHHHHHHCcC-EEEECCCHH------HHH-cCCCCCccchhhcccccccccccHHHHHHHHHhc--CCCcEEEEEcCCcC
Confidence            3444445576 489999751      222 22332 4677775532211112233444333222  26789999999985


Q ss_pred             ChHHHHHHHHHHHCCCC
Q 028983          153 HRTGCLVGCLRKLQKWC  169 (201)
Q Consensus       153 ~RTG~vva~~l~~~g~s  169 (201)
                       |+..+ +.+|...|++
T Consensus        84 -rs~~a-~~~L~~~G~~   98 (119)
T d1tq1a_          84 -RSIKA-TTDLLHAGFT   98 (119)
T ss_dssp             -HHHHH-HHHHHHHHCC
T ss_pred             -cHHHH-HHHHHhcccC
Confidence             76654 4444444553

>d1urha2 c.46.1.2 (A:149-268) 3-mercaptopyruvate sulfurtransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: 3-mercaptopyruvate sulfurtransferase
species: Escherichia coli [TaxId: 562]

Probab=94.42  E-value=0.075  Score=36.46  Aligned_cols=95  Identities=9%  Similarity=0.035  Sum_probs=48.2

Q ss_pred             hhHHHHHhcCCcEEEEcCCCC-CC---CchHHHHhhCCcE-EEEeeeCCCCCCCCCCCHHHHHHHHHHHHccCCCcEEEE
Q 028983           73 ANFSFLQTLRLRSIIYLCPEP-YP---EANTEFLKSNGIK-LFQFAIEGHKEPFVNIPEDMIREALKVLLDVRNHPVLIH  147 (201)
Q Consensus        73 ~~l~~L~~lGIktII~Lr~e~-~~---~~~~~~~~~~gi~-~~~ipi~d~~~p~~~i~~~~i~~~l~~l~~~~~~pVLVH  147 (201)
                      .++..+.+.+--.|||.|+.+ +.   ...........|. -+++|...........+.+.+.+.+....-..+.+|+++
T Consensus         9 ~ev~~~~~~~~~~liD~R~~~~f~G~~~~~~~~~~~G~Ipga~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ii~y   88 (120)
T d1urha2           9 TDVLLASHENTAQIIDARPAARFNAEVDEPRPGLRRGHIPGALNVPWTELVREGELKTTDELDAIFFGRGVSYDKPIIVS   88 (120)
T ss_dssp             HHHHHHHHHTCSEEEECSCHHHHSSCCCC----CCSSSCTTCEECCGGGGBSSSSBCCHHHHHHHHHTTTCCSSSCEEEE
T ss_pred             HHHHHHhhCCCcEEEeCCCHHHcCcccCCcccccccccccccchhchhhcccccccCCHHHhhhhhhhcccCccCceEEE
Confidence            344455556667899999851 11   0000001111121 234554332111112235666666665433468899999


Q ss_pred             cCCCCChHHHHHHHHHHHCCCC
Q 028983          148 CKRGKHRTGCLVGCLRKLQKWC  169 (201)
Q Consensus       148 C~aG~~RTG~vva~~l~~~g~s  169 (201)
                      |.+|. |++.++- +|...|.+
T Consensus        89 C~sG~-~A~~~~~-~L~~lG~~  108 (120)
T d1urha2          89 CGSGV-TAAVVLL-ALATLDVP  108 (120)
T ss_dssp             CCSSS-THHHHHH-HHHHTTCS
T ss_pred             ccchh-HHHHHHH-HHHHcCCC
Confidence            99986 7665443 34555654

>d1zsqa2 c.45.1.3 (A:199-585) Myotubularin-related protein 2, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: (Phosphotyrosine protein) phosphatases II
superfamily: (Phosphotyrosine protein) phosphatases II
family: Myotubularin-like phosphatases
domain: Myotubularin-related protein 2, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.23  E-value=0.055  Score=45.76  Aligned_cols=26  Identities=23%  Similarity=0.304  Sum_probs=22.6

Q ss_pred             CCCcEEEEcCCCCChHHHHHHHHHHH
Q 028983          140 RNHPVLIHCKRGKHRTGCLVGCLRKL  165 (201)
Q Consensus       140 ~~~pVLVHC~aG~~RTG~vva~~l~~  165 (201)
                      .+.+|||||..|.|||..++++...+
T Consensus       211 ~~~sVlVh~sdGwD~T~qvsSL~ql~  236 (387)
T d1zsqa2         211 GKTSVVVHSSDGWDRTAQLTSLAMLM  236 (387)
T ss_dssp             TCCCEEEECSSSSSHHHHHHHHHHHH
T ss_pred             CCCeEEEeCCCCCchhHHHHHHHHHH
Confidence            45699999999999999999887764

>d1ohea1 c.45.1.1 (A:42-198) Proline directed phosphatase CDC14b2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: (Phosphotyrosine protein) phosphatases II
superfamily: (Phosphotyrosine protein) phosphatases II
family: Dual specificity phosphatase-like
domain: Proline directed phosphatase CDC14b2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.89  E-value=0.32  Score=35.84  Aligned_cols=56  Identities=13%  Similarity=0.094  Sum_probs=37.9

Q ss_pred             CHHHHHHHHHHHHc----c-CCCcEEEEcCCCCCh----HHHHHHHHHH-HCCCCHHHHHHHHHHH
Q 028983          125 PEDMIREALKVLLD----V-RNHPVLIHCKRGKHR----TGCLVGCLRK-LQKWCLSSVFDEYQRF  180 (201)
Q Consensus       125 ~~~~i~~~l~~l~~----~-~~~pVLVHC~aG~~R----TG~vva~~l~-~~g~s~~~ai~ey~~~  180 (201)
                      +..++-++...+..    . ..+..+|||++...+    +.+++|||++ .++|+.++|+.-+...
T Consensus        52 NL~~lyrfc~~l~~~L~~~~~~~k~Iv~yts~d~~kraNAa~Lig~Y~Vi~l~~sp~~a~~~l~~~  117 (157)
T d1ohea1          52 NLAMVYRYCCKINKKLKSITMLRKKIVHFTGSDQRKQANAAFLVGCYMVIYLGRTPEEAYRILIFG  117 (157)
T ss_dssp             CHHHHHHHHHHHHHHHHCGGGTTSEEEEEECSCHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHTTT
T ss_pred             hHHHHHHHHHHHHHHHcChhhcCCeEEEECCCCHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHhc
Confidence            45555555444332    1 245677888876665    6788999988 6899999998766543

>d1yt8a4 c.46.1.2 (A:243-372) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Thiosulfate sulfurtransferase PA2603
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=89.49  E-value=0.2  Score=35.13  Aligned_cols=41  Identities=12%  Similarity=0.195  Sum_probs=26.4

Q ss_pred             HHHHHHHHHHHHccCCCcEEEEcCCCCChHHHHHHHHHHHCCC
Q 028983          126 EDMIREALKVLLDVRNHPVLIHCKRGKHRTGCLVGCLRKLQKW  168 (201)
Q Consensus       126 ~~~i~~~l~~l~~~~~~pVLVHC~aG~~RTG~vva~~l~~~g~  168 (201)
                      ...+......+.-..+.+|+++|.+|. |+.. ++.+|..+|+
T Consensus        65 ~~~~~~~~~~~~~~~~~~ivl~C~~G~-rS~~-aa~~L~~~G~  105 (130)
T d1yt8a4          65 GGQLVQETDHVASVRGARLVLVDDDGV-RANM-SASWLAQMGW  105 (130)
T ss_dssp             HHHHHHSHHHHCCSBTCEEEEECSSSS-HHHH-HHHHHHHTTC
T ss_pred             ccccccccccccCCccceEEeecCCCc-cHHH-HHHHHHHcCC
Confidence            344444444443346889999999884 8666 4555555666

>d1uara2 c.46.1.2 (A:145-285) Sulfurtransferase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Sulfurtransferase
species: Thermus thermophilus [TaxId: 274]

Probab=89.30  E-value=0.17  Score=36.35  Aligned_cols=69  Identities=12%  Similarity=0.147  Sum_probs=39.5

Q ss_pred             EEEeeeCCCCCCC-CCCCHHHHHHHHHHHHccCCCcEEEEcCCCCChHHHHHHHHHHHCCCC----HHHHHHHHH
Q 028983          109 LFQFAIEGHKEPF-VNIPEDMIREALKVLLDVRNHPVLIHCKRGKHRTGCLVGCLRKLQKWC----LSSVFDEYQ  178 (201)
Q Consensus       109 ~~~ipi~d~~~p~-~~i~~~~i~~~l~~l~~~~~~pVLVHC~aG~~RTG~vva~~l~~~g~s----~~~ai~ey~  178 (201)
                      -+++|+.+...+. ...+.+.+.+.+..+--..+.+|+++|.+|. |++..+.++....|++    ++--+.++.
T Consensus        56 A~nlp~~~~~~~~~~~~~~~~~~~~~~~~gi~~d~~vV~yC~~G~-~As~~~~~l~~~~G~~~v~~ydGs~~eW~  129 (141)
T d1uara2          56 AKNIPWAKAVNPDGTFKSAEELRALYEPLGITKDKDIVVYCRIAE-RSSHSWFVLKYLLGYPHVKNYDGSWTEWG  129 (141)
T ss_dssp             CEECCGGGGBCTTSCBCCHHHHHHHHGGGTCCTTSEEEEECSSHH-HHHHHHHHHHTTSCCSCEEEESSHHHHHT
T ss_pred             ccccccccccccccccccHHHHHHHHHHhCCCCCCeEEEEecCcc-hHHHHHHHHHHHcCCCCeeEeCCcHHHHh
Confidence            3567764421111 1234677777766542246789999999984 6655444443346776    444455553

>d1gmxa_ c.46.1.3 (A:) Sulfurtransferase GlpE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Single-domain sulfurtransferase
domain: Sulfurtransferase GlpE
species: Escherichia coli [TaxId: 562]

Probab=88.32  E-value=0.34  Score=32.61  Aligned_cols=42  Identities=14%  Similarity=0.220  Sum_probs=28.9

Q ss_pred             CCHHHHHHHHHHHHccCCCcEEEEcCCCCChHHHHHHHHHHHCCCC
Q 028983          124 IPEDMIREALKVLLDVRNHPVLIHCKRGKHRTGCLVGCLRKLQKWC  169 (201)
Q Consensus       124 i~~~~i~~~l~~l~~~~~~pVLVHC~aG~~RTG~vva~~l~~~g~s  169 (201)
                      ++.+.+.+.+..+  ..+.||+|+|..|. |+..+ +-+|..+|++
T Consensus        43 ip~~~l~~~~~~~--~~~~~ivv~c~~g~-rs~~~-a~~L~~~G~~   84 (108)
T d1gmxa_          43 LTNDTLGAFMRDN--DFDTPVMVMCYHGN-SSKGA-AQYLLQQGYD   84 (108)
T ss_dssp             CCHHHHHHHHHHS--CTTSCEEEECSSSS-HHHHH-HHHHHHHTCS
T ss_pred             ccchhHHHHhhhc--cccCcccccCCCCh-HHHHH-HHHHHHcCCC
Confidence            3456777666654  36899999999985 87654 4455556765

>d1t3ka_ c.46.1.1 (A:) Dual specificity phosphatase Cdc25 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Cell cycle control phosphatase, catalytic domain
domain: Dual specificity phosphatase Cdc25
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=87.27  E-value=0.34  Score=33.75  Aligned_cols=63  Identities=16%  Similarity=0.142  Sum_probs=36.6

Q ss_pred             cEEEEcCCCCCCCchHHHHhhCCcE-EEEeeeCCCCCCCCCCCHHHHHHHHHHHHccCCCcEEEEcCCCCChHHHHHHHH
Q 028983           84 RSIIYLCPEPYPEANTEFLKSNGIK-LFQFAIEGHKEPFVNIPEDMIREALKVLLDVRNHPVLIHCKRGKHRTGCLVGCL  162 (201)
Q Consensus        84 ktII~Lr~e~~~~~~~~~~~~~gi~-~~~ipi~d~~~p~~~i~~~~i~~~l~~l~~~~~~pVLVHC~aG~~RTG~vva~~  162 (201)
                      -.|||+|.+.      ++ +...|. -+|+|.....        +.+.+.++.+  ..+.++++||..|..|+...+..+
T Consensus        24 v~iIDvR~~~------e~-~~ghIpgAinip~~~~~--------~~~~~~~~~~--~~~~~iv~~c~~~~~~~~~aa~~l   86 (132)
T d1t3ka_          24 IAIIDVRDEE------RN-YDGHIAGSLHYASGSFD--------DKISHLVQNV--KDKDTLVFHSALSQVRGPTCARRL   86 (132)
T ss_dssp             EEEEEESCSH------HH-HSSCCCSSEEECCSSSS--------TTHHHHHHTC--CSCCEEEESSSCCSSSHHHHHHHH
T ss_pred             eEEEEccCHH------HH-HhccCcccceeeeeccc--------cccccccccc--ccccceEEEeccccccchHHHHHH
Confidence            3799999752      12 222332 4677775431        2233333322  357889999999988877665544


Q ss_pred             H
Q 028983          163 R  163 (201)
Q Consensus       163 l  163 (201)
                      .
T Consensus        87 ~   87 (132)
T d1t3ka_          87 V   87 (132)
T ss_dssp             H
T ss_pred             H
Confidence            4

>d1rhsa2 c.46.1.2 (A:150-293) Rhodanese {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Rhodanese
species: Cow (Bos taurus) [TaxId: 9913]

Probab=86.38  E-value=0.7  Score=32.89  Aligned_cols=54  Identities=11%  Similarity=0.123  Sum_probs=35.0

Q ss_pred             CHHHHHHHHHHHHccCCCcEEEEcCCCCChHHHHHHHHHHHCCCC----HHHHHHHHHHH
Q 028983          125 PEDMIREALKVLLDVRNHPVLIHCKRGKHRTGCLVGCLRKLQKWC----LSSVFDEYQRF  180 (201)
Q Consensus       125 ~~~~i~~~l~~l~~~~~~pVLVHC~aG~~RTG~vva~~l~~~g~s----~~~ai~ey~~~  180 (201)
                      +.+.+++.+...--..+.+|+++|.+|. |++.++. .+...|..    .+--+.|+...
T Consensus        75 ~~~~l~~~~~~~gi~~~~~iI~yC~sG~-~A~~~~~-~l~~lG~~~v~~YdGsw~eW~~~  132 (144)
T d1rhsa2          75 SPEELRAMFEAKKVDLTKPLIATCRKGV-TACHIAL-AAYLCGKPDVAIYDGSWFEWFHR  132 (144)
T ss_dssp             CHHHHHHHHHHTTCCTTSCEEEECSSSS-THHHHHH-HHHHTTCCCCEEESSHHHHHHHH
T ss_pred             CHHHHHHHHHHcCCCCCCCEEEEecccc-hHHHHHH-HHHHcCCCCCEEeCCCHHHHhhc
Confidence            4677777776543246789999999986 7665443 44555664    34556667654

>d1yt8a1 c.46.1.2 (A:107-242) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Thiosulfate sulfurtransferase PA2603
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=82.46  E-value=0.42  Score=33.69  Aligned_cols=79  Identities=11%  Similarity=-0.027  Sum_probs=43.6

Q ss_pred             CChhhHHHHHhcCC-cEEEEcCCCCCCCchHHHHhhCCcE-EEEeeeCCCCCCCCCCCHHHHHHHHHHHHccCCCcEEEE
Q 028983           70 PDSANFSFLQTLRL-RSIIYLCPEPYPEANTEFLKSNGIK-LFQFAIEGHKEPFVNIPEDMIREALKVLLDVRNHPVLIH  147 (201)
Q Consensus        70 p~~~~l~~L~~lGI-ktII~Lr~e~~~~~~~~~~~~~gi~-~~~ipi~d~~~p~~~i~~~~i~~~l~~l~~~~~~pVLVH  147 (201)
                      .++.++..+-+.+- -.|||+|+..      ++ +...|. -+|+|.            ..+...+..+....+.+|+++
T Consensus        26 Is~~el~~~l~~~~~~~liDvR~~~------e~-~~ghIpGAi~ip~------------~~l~~~~~~l~~~~~~~iV~~   86 (136)
T d1yt8a1          26 LAAEEVQALLDARAEAVILDARRFD------EY-QTMSIPGGISVPG------------AELVLRVAELAPDPRTRVIVN   86 (136)
T ss_dssp             ECHHHHHHHHHTTCSEEEEECSCHH------HH-HHSBCTTCEECCG------------GGHHHHHHHHCCSTTSEEEEE
T ss_pred             cCHHHHHHHHhcCCCcEEEEcCChh------hc-cceecCCchhhhh------------hHHHHHhhcccccccceEEEE
Confidence            45666655444454 3589999751      11 111121 234443            233444555443357899999


Q ss_pred             cCCCCChHHHHHHHHHHHCCCC
Q 028983          148 CKRGKHRTGCLVGCLRKLQKWC  169 (201)
Q Consensus       148 C~aG~~RTG~vva~~l~~~g~s  169 (201)
                      |..|. |+..++. +|...|++
T Consensus        87 C~~g~-rs~~aa~-~L~~~G~~  106 (136)
T d1yt8a1          87 CAGRT-RSIIGTQ-SLLNAGIP  106 (136)
T ss_dssp             CSSSH-HHHHHHH-HHHHTTCS
T ss_pred             cCCCC-chHHHHH-HHHHcCCC
Confidence            99885 8766544 45555653