Citrus Sinensis ID: 029132

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------20
Protein Sequence
MTILPHHFFQIDALDLAPRLLGKFLRRDDVLLQITEVEAYRPNDSACHGRFGITARTAPVFGPGGLAYVYLCYGLHTMLNVVADKEGVGAAVLIRSCAPVSGLKTIQQRRAQLTEKPVLLTGPGKVGQALGISTEWSNHPLYMPGGLEILDGPKPEKILIGPRVGIEYALPEHVNALWRFAIAGTPWISAPKNTLMPQ
Secondary Structure (PSIPRED)
ccccccccccccHHHHHHHccccEEEEccccEEEEEEEEccccccccccccccccccccccccccEEEEEEEEccEEEEEEEEcccccEEEEEEccccccccHHHHHHHHccccccccccccHHHHHHHHccccccccccccccccEEEEcccccccEEEccEEEEEcccccccccEEEEEEccccEEcccccccccc
Secondary Structure Prediction (SSPRO)
cccccHHHHcccHHHHHHHHHcHEEEEccccEEEEEEEEcccccccHHcccccccccccccccccEEEEEEEEcEEEEEEEEEcccccccEEEEEEcccccHHHHHHHHHcccccHHHHccccHHHHHHHcccHHcccccccccccEEEccccccccEEEcccEEEccccccHccccEEEEEcccccEcccccccccc
Coil and Loop (DISEMBL)
mtilphhffqidALDLAPRLLGKFLRRDDVLLQITEveayrpndsachgrfgitartapvfgpggLAYVYLCYGLHTMLNVVADKEGVGAAVLIRscapvsglKTIQQRRAQLtekpvlltgpgkvgqalgistewsnhplympggleildgpkpekiligprvgieyalpeHVNALWRFAiagtpwisapkntlmpq
Flexible Loop (DISEMBL)
MTILPHHFFQIDALDLAPRLLGKFLRRDDVLLQITeveayrpndsachgRFGITARTAPVFGPGGLAYVYLCYGLHTMLNVVADKEGVGAAVLIRSCAPVSGLKTIQQRRAQLtekpvlltgpgKVGQALGISTEWSNHPLYMPGGLEILDGPKPEKILIGPRVGIEYALPEHVNALWRFAIagtpwisapkntlmpq
Low Complexity Region (SEG)
MTILPHHFFQIDALDLAPRLLGKFLRRDDVLLQITEVEAYRPNDSACHGRFGITARTAPVFGPGGLAYVYLCYGLHTMLNVVADKEGVGAAVLIRSCAPVSGLKTIQQRRAQLTEKPVLLTGPGKVGQALGISTEWSNHPLYMPGGLEILDGPKPEKILIGPRVGIEYALPEHVNALWRFAIAGTPWISAPKNTLMPQ
Disordered region (IsUnstruct)
**ILPHHFFQIDALDLAPRLLGKFLRRDDVLLQITEVEAYRPNDSACHGRFGITARTAPVFGPGGLAYVYLCYGLHTMLNVVADKEGVGAAVLIRSCAPVSGLKTIQQRRAQLTEKPVLLTGPGKVGQALGISTEWSNHPLYMPGGLEILDGPKPEKILIGPRVGIEYALPEHVNALWRFAIAGTPWIS*********
Disordered Region (DISOPRED)
*TILPHHFFQIDALDLAPRLLGKFLRRDDVLLQITEVEAYRPNDSACHGRFGITARTAPVFGPGGLAYVYLCYGLHTMLNVVADKEGVGAAVLIRSCAPVSGLKTIQQ*********VLLTGPGKVGQALGISTEWSNHPLYMPGGLEILDGPKPEKILIGPRVGIEYALPEHVNALWRFAIAGTPWIS**K******
Disordered Region (DISEMBL)
MTILPHHFFQIDALDLAPRLLGKFLRRDDVLLQITEVEAYRPNDSACHGRFGITARTAPVFGPGGLAYVYLCYGLHTMLNVVADKEGVGAAVLIRSCAPVSGLKTIQQRRAQLTEKPVLLTGPGKVGQALGISTEWSNHPLYMPGGLEILDGPKPEKILIGPRVGIEYALPEHVNALWRFAIAGTPWISAPKNTLMPQ
Disordered Region (DISPRO)
*TILPHHFFQIDALDLAPRLLGKFLRRDDVLLQITEVEAYRPNDSACHGRFGITARTAPVFGPGGLAYVYLCYGLHTMLNVVADKEGVGAAVLIRSCAPVSGLKTIQQRRAQLTEKPVLLTGPGKVGQALGISTEWSNHPLYMPGGLEILDGPKPEKILIGPRVGIEYALPEHVNALWRFAIAGTPWIS*********
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MTILPHHFFQIDALDLAPRLLGKFLRRDDVLLQITEVEAYRPNDSACHGRFGITARTAPVFGPGGLAYVYLCYGLHTMLNVVADKEGVGAAVLIRSCAPVSGLKTIQQRRAQLTEKPVLLTGPGKVGQALGISTEWSNHPLYMPGGLEILDGPKPEKILIGPRVGIEYALPEHVNALWRFAIAGTPWISAPKNTLMPQ
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	198	2.2.26 [Sep-21-2011]
Q39147	254	DNA-3-methyladenine glyco	yes	no	0.994	0.775	0.808	1e-93
Q3JEY0	201	Putative 3-methyladenine	yes	no	0.979	0.965	0.553	8e-53
Q0W5C8	200	Putative 3-methyladenine	yes	no	0.949	0.94	0.386	5e-29
Q5WY41	183	Putative 3-methyladenine	yes	no	0.878	0.950	0.413	6e-28
B2A7A8	198	Putative 3-methyladenine	yes	no	0.934	0.934	0.379	1e-27
A5IG48	183	Putative 3-methyladenine	yes	no	0.878	0.950	0.403	2e-27
Q2IW19	201	Putative 3-methyladenine	yes	no	0.919	0.905	0.409	4e-27
B3QKY6	209	Putative 3-methyladenine	yes	no	0.929	0.880	0.386	6e-27
Q5ZX66	183	Putative 3-methyladenine	yes	no	0.843	0.912	0.402	2e-26
Q5X6N6	183	Putative 3-methyladenine	yes	no	0.843	0.912	0.402	2e-26

>sp|Q39147|3MG_ARATH DNA-3-methyladenine glycosylase OS=Arabidopsis thaliana GN=MAG PE=2 SV=1

 Score =  342 bits (877), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 160/198 (80%), Positives = 182/198 (91%), Gaps = 1/198 (0%)

Query: 1   MTILPHHFFQIDALDLAPRLLGKFLRRDDVLLQITEVEAYRPNDSACHGRFGITARTAPV 60
           M ++P  FFQIDALDLAPRLLGKF+RRD+V+L+ITEVEAYRPNDSACHGRFG+T RTAPV
Sbjct: 56  MKLMPPEFFQIDALDLAPRLLGKFMRRDNVVLRITEVEAYRPNDSACHGRFGVTPRTAPV 115

Query: 61  FGPGGLAYVYLCYGLHTMLNVVADKEGVGAAVLIRSCAPVSGLKTIQQRRAQLTEKPVLL 120
           FGPGG AYVYLCYGLH MLN+VADKEGVGAAVLIRSC+PVSG++TIQ+RR   T+KPVLL
Sbjct: 116 FGPGGHAYVYLCYGLHMMLNIVADKEGVGAAVLIRSCSPVSGMETIQERRGLKTDKPVLL 175

Query: 121 TGPGKVGQALGISTEWSNHPLYMPGGLEILDGPKP-EKILIGPRVGIEYALPEHVNALWR 179
            GPGKVGQALG+STEWS+HPLY PGGLE+LDG +  EK+++GPRVGI+YALPEHVNALWR
Sbjct: 176 NGPGKVGQALGLSTEWSHHPLYSPGGLELLDGGEDVEKVMVGPRVGIDYALPEHVNALWR 235

Query: 180 FAIAGTPWISAPKNTLMP 197
           FA+A TPWISAPKNTL P
Sbjct: 236 FAVADTPWISAPKNTLKP 253

Hydrolysis of the deoxyribose N-glycosidic bond to excise 3-methyladenine, and 7-methylguanine from the damaged DNA polymer formed by alkylation lesions.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 2EC: .EC: 2EC: .EC: 2EC: 1

>sp|Q3JEY0|3MGH_NITOC Putative 3-methyladenine DNA glycosylase OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=Noc_0079 PE=3 SV=1

 Score =  206 bits (524), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 109/197 (55%), Positives = 137/197 (69%), Gaps = 3/197 (1%)

Query: 3   ILPHHFFQIDALDLAPRLLGKFLRRDDVLLQITEVEAYR-PNDSACHGRFGITARTAPVF 61
           +LP  F+  DAL++A  LLG  L R+ V+L+ITEVEAYR P D+A HGR G T R  P++
Sbjct: 4   LLPPRFYARDALEVAADLLGASLCREQVVLRITEVEAYRWPEDTANHGRHGQTLRNEPLW 63

Query: 62  GPGGLAYVYLCYGLHTMLNVVADKEGVGAAVLIRSCAPVSGLKTIQQRRAQLTEKPVLLT 121
           GP G  Y+YLCYG+H +LN+V  +EG  AAVLIR+C PV+GL  IQ+RR     KP LLT
Sbjct: 64  GPPGRVYLYLCYGIHHLLNLVTGEEGQAAAVLIRACEPVAGLDLIQRRRRGKI-KPGLLT 122

Query: 122 GPGKVGQALGISTEWSNHPLYMPGGLEILDGPKPEKILIGPRVGIEYALPEHVNALWRFA 181
           GPGKVG ALG+   W++HPLY PGGLE+  G     +L GPRVGI YA PEH +A WR A
Sbjct: 123 GPGKVGAALGLDLSWNHHPLYEPGGLEVRRGTPVAALLAGPRVGIAYAHPEHRDAPWRLA 182

Query: 182 IAGTPWISAPKNTLMPQ 198
           I   PW+S  ++ L P+
Sbjct: 183 IPDNPWVSC-RSQLQPR 198

Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) (taxid: 323261)

EC: 3

EC: .

EC: 2

EC: .

EC: 2

EC: .

EC: -

>sp|Q0W5C8|3MGH_UNCMA Putative 3-methyladenine DNA glycosylase OS=Uncultured methanogenic archaeon RC-I GN=UNCMA_17850 PE=3 SV=1

 Score =  127 bits (319), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 75/194 (38%), Positives = 110/194 (56%), Gaps = 6/194 (3%)

Query: 1   MTILPHHFFQIDALDLAPRLLGKFLRRD----DVLLQITEVEAY-RPNDSACHGRFGITA 55
           M +LP  F+    L++A  LLGK L R      V L+I E EAY   ND ACH   G+TA
Sbjct: 1   MPVLPRDFYDRPTLEVARDLLGKTLVRQLPAGRVALRIVETEAYIGENDKACHASKGMTA 60

Query: 56  RTAPVFGPGGLAYVYLCYGLHTMLNVVADKEGVGAAVLIRSCAPVSGLKTIQQRRAQLTE 115
           R   +FG  G AYVYL YG++  LN+V +K+G  AAVLIR+  P+ G + +   R +  +
Sbjct: 61  RNRVMFGQPGHAYVYLIYGMYNCLNLVTEKDGYPAAVLIRAGEPIEGEEIMSSLRPKARK 120

Query: 116 KPVLLTGPGKVGQALGISTEWSNHPLYMPGGLEILDGPKPEKILIGPRVGIEYALPEHVN 175
              + +GPGK+  A+ I+   +   +   G L + DGP  +KI+  PR+G++YA  + + 
Sbjct: 121 HHEIASGPGKLCGAMSITRALNGADVCASGELYVEDGPAVKKIVACPRIGVDYAGEDALR 180

Query: 176 ALWRFAIAGTPWIS 189
             WRF    +P +S
Sbjct: 181 P-WRFYDKNSPCVS 193

Uncultured methanogenic archaeon RC-I (taxid: 351160)

EC: 3

EC: .

EC: 2

EC: .

EC: 2

EC: .

EC: -

>sp|Q5WY41|3MGH_LEGPL Putative 3-methyladenine DNA glycosylase OS=Legionella pneumophila (strain Lens) GN=lpl0898 PE=3 SV=1

 Score =  124 bits (310), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 81/196 (41%), Positives = 109/196 (55%), Gaps = 22/196 (11%)

Query: 1   MTILPHHFFQIDALDLAPRLLGKFLRRDDVLLQ----ITEVEAYR-PNDSACHGRFGITA 55
           M  LP  F++ D + +A  LLGK+L   D L +    I EVEAY   +D ACH   G+T 
Sbjct: 1   MRKLPRPFYERDTVLVAKELLGKYLVHHDGLEEKIGRIVEVEAYLGQHDLACHSSKGLTK 60

Query: 56  RTAPVFGPGGLAYVYLCYGLHTMLNVVADKEGVGAAVLIRSCAPVSGLKTIQQRRAQLTE 115
           RT  +FGP G AYVYL YG++  +NVV +KEGVG+AVLIR+  P+   K IQ R      
Sbjct: 61  RTKVMFGPAGYAYVYLIYGMYYCMNVVTEKEGVGSAVLIRALEPI---KNIQDR------ 111

Query: 116 KPVLLTGPGKVGQALGISTEWSNHPLYMPGGLEILD--GPKPEKILIGPRVGIEYALPEH 173
                 GPG + +A+ I ++  NH   +     I +  GP    I+  PR+G+ YA  E 
Sbjct: 112 ----TQGPGLLSKAMRIDSKL-NHRDLLSNDFYIAEPYGPTDFTIIEKPRIGVHYA-KEW 165

Query: 174 VNALWRFAIAGTPWIS 189
            +AL RF I   P+IS
Sbjct: 166 ADALLRFYIKDNPYIS 181

Legionella pneumophila (strain Lens) (taxid: 297245)

EC: 3

EC: .

EC: 2

EC: .

EC: 2

EC: .

EC: -

>sp|B2A7A8|3MGH_NATTJ Putative 3-methyladenine DNA glycosylase OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=Nther_0710 PE=3 SV=1

 Score =  122 bits (307), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 74/195 (37%), Positives = 104/195 (53%), Gaps = 10/195 (5%)

Query: 4   LPHHFFQIDALDLAPRLLGKFLRRD----DVLLQITEVEAYR-PNDSACHG-RFGITART 57
           L + FFQ DA+ +A  L+GK L R+    +++ +I + EAY  P D  CH  +   T RT
Sbjct: 3   LDYEFFQRDAVSVAKDLIGKLLVRNLNGEELICRIVDTEAYCGPEDKGCHAYQNKRTNRT 62

Query: 58  APVFGPGGLAYVYLCYGLHTMLNVVADKEGVGAAVLIRSCAPVSGLKTIQQRRAQLTEKP 117
             ++  GG  YVYL YGLH   NVV  K+    AV IR+  P+SGLKT++  R   + K 
Sbjct: 63  EVMYKSGGYVYVYLIYGLHYCFNVVVSKQDRPEAVFIRAGEPISGLKTMRDNRNIKSNKK 122

Query: 118 VLLT-GPGKVGQALGISTEWSNHPLYMPGGLEILDGPKPEKILIGP--RVGIEYALPEHV 174
             LT GPGK+ QA+ I    +   L     + +      +   I P  RV I+YA  E+ 
Sbjct: 123 TELTNGPGKLSQAMAIDKSLNGQDLVASKEIYLRHACDSQSYQIIPAKRVNIDYA-EEYT 181

Query: 175 NALWRFAIAGTPWIS 189
           + LWRF I   P++S
Sbjct: 182 DKLWRFYIRDNPFVS 196

Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) (taxid: 457570)

EC: 3

EC: .

EC: 2

EC: .

EC: 2

EC: .

EC: -

>sp|A5IG48|3MGH_LEGPC Putative 3-methyladenine DNA glycosylase OS=Legionella pneumophila (strain Corby) GN=LPC_2427 PE=3 SV=1

 Score =  122 bits (305), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 79/196 (40%), Positives = 107/196 (54%), Gaps = 22/196 (11%)

Query: 1   MTILPHHFFQIDALDLAPRLLGKFLRRDDVLLQ----ITEVEAYR-PNDSACHGRFGITA 55
           M  LP  F++ D + +A  LLGK+L   D L +    I EVEAY   +D ACH   G+T 
Sbjct: 1   MRKLPRPFYERDTILVAKELLGKYLVHHDGLEEKIGRIVEVEAYLGQHDLACHSSKGLTK 60

Query: 56  RTAPVFGPGGLAYVYLCYGLHTMLNVVADKEGVGAAVLIRSCAPVSGLKTIQQRRAQLTE 115
           RT  +FGP G AYVYL YG++  +NVV +KEG+G+AVLIR+  P+   K IQ R      
Sbjct: 61  RTKVMFGPAGYAYVYLIYGMYYCMNVVTEKEGIGSAVLIRALEPI---KNIQDR------ 111

Query: 116 KPVLLTGPGKVGQALGISTEWSNHPLYMPGGLEILD--GPKPEKILIGPRVGIEYALPEH 173
                 GPG + +A+ I ++  NH   +     I +   P    I+  PR+G+ YA  E 
Sbjct: 112 ----TQGPGLLSKAMRIDSKL-NHRDLLSNDFYIAEPNSPTDFTIIEKPRIGVHYA-KEW 165

Query: 174 VNALWRFAIAGTPWIS 189
            N L RF I   P+IS
Sbjct: 166 ANELLRFYIKDNPYIS 181

Legionella pneumophila (strain Corby) (taxid: 400673)

EC: 3

EC: .

EC: 2

EC: .

EC: 2

EC: .

EC: -

>sp|Q2IW19|3MGH_RHOP2 Putative 3-methyladenine DNA glycosylase OS=Rhodopseudomonas palustris (strain HaA2) GN=RPB_2889 PE=3 SV=1

 Score =  121 bits (303), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 77/188 (40%), Positives = 102/188 (54%), Gaps = 6/188 (3%)

Query: 4   LPHHFFQIDALDLAPRLLGKFLRRDDVLLQITEVEAYRPNDSACHGRFGITARTAPVFGP 63
           L   FF     ++AP L+G  L  + V   I EVEAY   D A H   G TAR A +FGP
Sbjct: 18  LRRRFFARSVHEVAPELIGATLLVEGVGGVIVEVEAYHHTDPAAHSYGGQTARNAVMFGP 77

Query: 64  GGLAYVYLCYGLHTMLNVVADKEGVGAAVLIRSCAPVSGLKTIQQRRAQLTEKPVLLTGP 123
            G AYVY  YG+H  +NVV + EG  +AVLIR+  P  G++ ++ RR  L +   L +GP
Sbjct: 78  PGFAYVYRSYGIHWCVNVVCEAEGSASAVLIRALQPTHGVEAMRARRG-LDDARSLCSGP 136

Query: 124 GKVGQALGISTEWSNHPLYMPGGLEILDGPKPEKILIGPRVGIEYALPEHVNALWRFAIA 183
           GK+ QALGIS   +  PL  P    I        I+ GPR+GI  A     +  WRF + 
Sbjct: 137 GKLAQALGISIAHNGLPLDAP-PFAIHRRIGEPDIVTGPRIGITKA----ADYPWRFGLK 191

Query: 184 GTPWISAP 191
           G+ ++S P
Sbjct: 192 GSRFVSVP 199

Rhodopseudomonas palustris (strain HaA2) (taxid: 316058)

EC: 3

EC: .

EC: 2

EC: .

EC: 2

EC: .

EC: -

>sp|B3QKY6|3MGH_CHLP8 Putative 3-methyladenine DNA glycosylase OS=Chlorobaculum parvum (strain NCIB 8327) GN=Cpar_0350 PE=3 SV=1

 Score =  120 bits (301), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 78/202 (38%), Positives = 112/202 (55%), Gaps = 18/202 (8%)

Query: 1   MTILPHHFFQIDALDLAPRLLGK-FLRRDDVLL----QITEVEAY-RPNDSACHGRFGIT 54
           M  L   F+Q   L+LA RLLGK F+R +D  +    +I E EAY    D ACH   G+T
Sbjct: 1   MKRLGAEFYQAPTLELAERLLGKIFVRCEDTGMVTKARIVETEAYLGEGDEACHAWRGMT 60

Query: 55  ARTAPVFGPGGLAYVYLCYGLHTMLNVVADKEGVGAAVLIRSCAPVSGLKTIQQRRAQLT 114
            R   +FGP G  Y+Y  YG H M+N+V+++EG   AVL+R+  P+ G+  +Q+RR    
Sbjct: 61  NRNRAMFGPPGHLYIYFTYGCHYMINIVSEQEGTAGAVLLRAMEPLEGIDRMQERRGTAD 120

Query: 115 EKPVLLTGPGKVGQALGISTEWSNHPLYMPGGLEILDGPKPEKILIG--PRVGIEYA--L 170
           E+  L++GPGK+ QALGI  E     L +     + D P+  + LIG  PR+GI  +  L
Sbjct: 121 ER-ALMSGPGKLAQALGIGPELYGSSL-LGESCWLEDAPEIPEELIGTSPRIGITRSTEL 178

Query: 171 PEHVNALWRFAIAGTPWISAPK 192
           P      WR  +  +P +S  +
Sbjct: 179 P------WRKFVTASPHVSTTR 194

Chlorobaculum parvum (strain NCIB 8327) (taxid: 517417)

EC: 3

EC: .

EC: 2

EC: .

EC: 2

EC: .

EC: -

>sp|Q5ZX66|3MGH_LEGPH Putative 3-methyladenine DNA glycosylase OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=lpg0866 PE=3 SV=1

 Score =  118 bits (296), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 76/189 (40%), Positives = 104/189 (55%), Gaps = 22/189 (11%)

Query: 8   FFQIDALDLAPRLLGKFLRRDDVLLQ----ITEVEAYR-PNDSACHGRFGITARTAPVFG 62
           F++ D + +A  LLGK+L   D L +    I EVEAY   +D ACH   G+T RT  +FG
Sbjct: 8   FYERDTVLVAKELLGKYLVHHDGLEEKIGRIVEVEAYLGQHDLACHSSKGLTKRTKVMFG 67

Query: 63  PGGLAYVYLCYGLHTMLNVVADKEGVGAAVLIRSCAPVSGLKTIQQRRAQLTEKPVLLTG 122
           P G AYVYL YG++  +NVV +KEG+G+AVLIR+  P+   K IQ R            G
Sbjct: 68  PAGYAYVYLIYGMYYCMNVVTEKEGIGSAVLIRALEPI---KNIQDR----------TQG 114

Query: 123 PGKVGQALGISTEWSNHPLYMPGGLEILD--GPKPEKILIGPRVGIEYALPEHVNALWRF 180
           PG + +A+ I ++  NH   +     I +   P    I+  PR+G+ YA  E  N L RF
Sbjct: 115 PGLLSKAMRIDSKL-NHRDLLSNDFYIAEPNSPTDFTIIEKPRIGVHYA-KEWANELLRF 172

Query: 181 AIAGTPWIS 189
            I   P+IS
Sbjct: 173 YIKDNPYIS 181

Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) (taxid: 272624)

EC: 3

EC: .

EC: 2

EC: .

EC: 2

EC: .

EC: -

>sp|Q5X6N6|3MGH_LEGPA Putative 3-methyladenine DNA glycosylase OS=Legionella pneumophila (strain Paris) GN=lpp0929 PE=3 SV=1

 Score =  118 bits (296), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 76/189 (40%), Positives = 104/189 (55%), Gaps = 22/189 (11%)

Query: 8   FFQIDALDLAPRLLGKFLRRDDVLLQ----ITEVEAYR-PNDSACHGRFGITARTAPVFG 62
           F++ D + +A  LLGK+L   D L +    I EVEAY   +D ACH   G+T RT  +FG
Sbjct: 8   FYERDTVLVAKELLGKYLVHHDGLEEKIGRIVEVEAYLGQHDLACHSSKGLTKRTKVMFG 67

Query: 63  PGGLAYVYLCYGLHTMLNVVADKEGVGAAVLIRSCAPVSGLKTIQQRRAQLTEKPVLLTG 122
           P G AYVYL YG++  +NVV +KEG+G+AVLIR+  P+   K IQ R            G
Sbjct: 68  PAGYAYVYLIYGMYYCMNVVTEKEGIGSAVLIRALEPI---KNIQDR----------TQG 114

Query: 123 PGKVGQALGISTEWSNHPLYMPGGLEILD--GPKPEKILIGPRVGIEYALPEHVNALWRF 180
           PG + +A+ I ++  NH   +     I +   P    I+  PR+G+ YA  E  N L RF
Sbjct: 115 PGLLSKAMRIDSKL-NHRDLLSNDFYIAEPNSPTDFTIIEKPRIGVHYA-KEWANELLRF 172

Query: 181 AIAGTPWIS 189
            I   P+IS
Sbjct: 173 YIKDNPYIS 181

Legionella pneumophila (strain Paris) (taxid: 297246)

EC: 3

EC: .

EC: 2

EC: .

EC: 2

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	198
255579017	258	DNA-3-methyladenine glycosylase, putativ	0.984	0.755	0.897	1e-100
224139902	198	predicted protein [Populus trichocarpa]	0.994	0.994	0.873	4e-98
356572126	276	PREDICTED: DNA-3-methyladenine glycosyla	0.994	0.713	0.852	6e-96
223974919	261	unknown [Zea mays]	0.984	0.747	0.851	1e-95
449437561	281	PREDICTED: DNA-3-methyladenine glycosyla	0.984	0.693	0.841	8e-95
449501918	281	PREDICTED: DNA-3-methyladenine glycosyla	0.984	0.693	0.841	9e-95
357137891	262	PREDICTED: DNA-3-methyladenine glycosyla	0.984	0.744	0.846	1e-94
413939147	263	DNA-3-methyladenine glycosylase [Zea may	0.984	0.741	0.851	1e-94
115448991	286	Os02g0774500 [Oryza sativa Japonica Grou	0.984	0.681	0.851	3e-94
326521346	262	predicted protein [Hordeum vulgare subsp	0.984	0.744	0.846	4e-94

>gi|255579017|ref|XP_002530360.1| DNA-3-methyladenine glycosylase, putative [Ricinus communis] gi|223530107|gb|EEF32021.1| DNA-3-methyladenine glycosylase, putative [Ricinus communis]

 Score =  369 bits (948), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 175/195 (89%), Positives = 185/195 (94%)

Query: 3   ILPHHFFQIDALDLAPRLLGKFLRRDDVLLQITEVEAYRPNDSACHGRFGITARTAPVFG 62
           ILP  FFQIDALDLAPRLLGKFLRRDDV+LQITEVEAYRPNDSACHGRFG+TARTAPVFG
Sbjct: 63  ILPSQFFQIDALDLAPRLLGKFLRRDDVILQITEVEAYRPNDSACHGRFGVTARTAPVFG 122

Query: 63  PGGLAYVYLCYGLHTMLNVVADKEGVGAAVLIRSCAPVSGLKTIQQRRAQLTEKPVLLTG 122
           PGG AYVYLCYGLHTMLNVVADKEGVGAAVLIRSCAP+SGL TIQQRR Q TEKPVLLTG
Sbjct: 123 PGGHAYVYLCYGLHTMLNVVADKEGVGAAVLIRSCAPISGLDTIQQRRGQKTEKPVLLTG 182

Query: 123 PGKVGQALGISTEWSNHPLYMPGGLEILDGPKPEKILIGPRVGIEYALPEHVNALWRFAI 182
           PGK+GQALGISTEWS+HPLY PGGLE+LDGP+P+ IL+GPR+GIEYALPEHVNALWRFAI
Sbjct: 183 PGKIGQALGISTEWSSHPLYSPGGLELLDGPEPKNILVGPRIGIEYALPEHVNALWRFAI 242

Query: 183 AGTPWISAPKNTLMP 197
           A TPWISAPKNTL P
Sbjct: 243 ADTPWISAPKNTLRP 257

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224139902|ref|XP_002323332.1| predicted protein [Populus trichocarpa] gi|222867962|gb|EEF05093.1| predicted protein [Populus trichocarpa]

 Score =  362 bits (929), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 172/197 (87%), Positives = 186/197 (94%)

Query: 1   MTILPHHFFQIDALDLAPRLLGKFLRRDDVLLQITEVEAYRPNDSACHGRFGITARTAPV 60
           MTILP  FFQIDALDLAPRLLGKFL+RD+V+LQITEVEAYRPNDSACHGRFGITARTAPV
Sbjct: 1   MTILPREFFQIDALDLAPRLLGKFLKRDNVVLQITEVEAYRPNDSACHGRFGITARTAPV 60

Query: 61  FGPGGLAYVYLCYGLHTMLNVVADKEGVGAAVLIRSCAPVSGLKTIQQRRAQLTEKPVLL 120
           FGPGG AYVYLCYGLHTMLNVVADKEG+GAAVLIRSCAP+SG+ TIQ+RR Q TEKP LL
Sbjct: 61  FGPGGHAYVYLCYGLHTMLNVVADKEGIGAAVLIRSCAPISGMDTIQERRGQKTEKPALL 120

Query: 121 TGPGKVGQALGISTEWSNHPLYMPGGLEILDGPKPEKILIGPRVGIEYALPEHVNALWRF 180
            GPGK+GQALGISTEWSNHPL+ PGGLE+LDGP+PEKIL+GPRVGI+YALPEHV+ALWRF
Sbjct: 121 NGPGKIGQALGISTEWSNHPLHSPGGLELLDGPEPEKILVGPRVGIDYALPEHVSALWRF 180

Query: 181 AIAGTPWISAPKNTLMP 197
           AIAGT WISAPKNTL P
Sbjct: 181 AIAGTAWISAPKNTLRP 197

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356572126|ref|XP_003554221.1| PREDICTED: DNA-3-methyladenine glycosylase-like [Glycine max]

 Score =  355 bits (910), Expect = 6e-96,   Method: Compositional matrix adjust.
 Identities = 168/197 (85%), Positives = 180/197 (91%)

Query: 1   MTILPHHFFQIDALDLAPRLLGKFLRRDDVLLQITEVEAYRPNDSACHGRFGITARTAPV 60
           M  L   FFQIDALDLAPRLLGKFLRRDDV+L+ITEVEAYRPNDSACHGRFG+T+RTAPV
Sbjct: 79  MKTLTLDFFQIDALDLAPRLLGKFLRRDDVVLRITEVEAYRPNDSACHGRFGVTSRTAPV 138

Query: 61  FGPGGLAYVYLCYGLHTMLNVVADKEGVGAAVLIRSCAPVSGLKTIQQRRAQLTEKPVLL 120
           FGPGG AYVYLCYGLH MLNVVADKEG GAAVLIRSC+PVSGL  IQQRR   TEKP+LL
Sbjct: 139 FGPGGHAYVYLCYGLHMMLNVVADKEGAGAAVLIRSCSPVSGLDVIQQRRGLKTEKPILL 198

Query: 121 TGPGKVGQALGISTEWSNHPLYMPGGLEILDGPKPEKILIGPRVGIEYALPEHVNALWRF 180
           TGPGKVGQALG+STEWSNHPLY PGGLE+LDGP+PE IL+GPRVGI+YA PEH+NALWRF
Sbjct: 199 TGPGKVGQALGLSTEWSNHPLYTPGGLELLDGPEPENILVGPRVGIQYASPEHINALWRF 258

Query: 181 AIAGTPWISAPKNTLMP 197
           AIAGTPWISAPKNTL P
Sbjct: 259 AIAGTPWISAPKNTLRP 275

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|223974919|gb|ACN31647.1| unknown [Zea mays]

 Score =  354 bits (908), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 166/195 (85%), Positives = 182/195 (93%)

Query: 4   LPHHFFQIDALDLAPRLLGKFLRRDDVLLQITEVEAYRPNDSACHGRFGITARTAPVFGP 63
           LP HFF++DALDLAPRLLGK LRRD+V+L+ITEVEAYRPNDSACHGRFGITARTAPVFGP
Sbjct: 66  LPRHFFEVDALDLAPRLLGKLLRRDEVVLRITEVEAYRPNDSACHGRFGITARTAPVFGP 125

Query: 64  GGLAYVYLCYGLHTMLNVVADKEGVGAAVLIRSCAPVSGLKTIQQRRAQLTEKPVLLTGP 123
           GG AYVYLCYGLH MLNVVAD EGVGAAVLIRSC+PVSGL+TIQ+RR Q TEKP+LLTGP
Sbjct: 126 GGHAYVYLCYGLHMMLNVVADIEGVGAAVLIRSCSPVSGLETIQRRRGQQTEKPILLTGP 185

Query: 124 GKVGQALGISTEWSNHPLYMPGGLEILDGPKPEKILIGPRVGIEYALPEHVNALWRFAIA 183
           GKVGQALG+ST+WSNHPLY PGGLE+LDGP+PE +L+GPRVGIEYA PEHV A WRFAIA
Sbjct: 186 GKVGQALGLSTDWSNHPLYAPGGLEVLDGPEPESVLVGPRVGIEYASPEHVAAPWRFAIA 245

Query: 184 GTPWISAPKNTLMPQ 198
           GTPWISAPKNTL P+
Sbjct: 246 GTPWISAPKNTLRPR 260

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449437561|ref|XP_004136560.1| PREDICTED: DNA-3-methyladenine glycosylase-like [Cucumis sativus]

 Score =  351 bits (901), Expect = 8e-95,   Method: Compositional matrix adjust.
 Identities = 164/195 (84%), Positives = 181/195 (92%)

Query: 1   MTILPHHFFQIDALDLAPRLLGKFLRRDDVLLQITEVEAYRPNDSACHGRFGITARTAPV 60
            TILP  FF +DALDLAPRLLGK +RRDDV+L+ITEVEAYRPNDSACHGRFG+TARTAPV
Sbjct: 84  FTILPKEFFLVDALDLAPRLLGKLIRRDDVVLRITEVEAYRPNDSACHGRFGVTARTAPV 143

Query: 61  FGPGGLAYVYLCYGLHTMLNVVADKEGVGAAVLIRSCAPVSGLKTIQQRRAQLTEKPVLL 120
           FGPGG AY+YLCYGLH MLNVVAD+ G+GAAVL+R+CAPVSGL+TIQ+RR  +T+KPVLL
Sbjct: 144 FGPGGHAYIYLCYGLHMMLNVVADEVGLGAAVLVRACAPVSGLETIQKRRGLITDKPVLL 203

Query: 121 TGPGKVGQALGISTEWSNHPLYMPGGLEILDGPKPEKILIGPRVGIEYALPEHVNALWRF 180
           TGPGKVGQALG+STEWSNHP Y PGGLE+LD PKPE IL+GPRVGIEYALPEHVNALWRF
Sbjct: 204 TGPGKVGQALGLSTEWSNHPFYTPGGLELLDAPKPESILVGPRVGIEYALPEHVNALWRF 263

Query: 181 AIAGTPWISAPKNTL 195
           AIAGTPWISAPKNTL
Sbjct: 264 AIAGTPWISAPKNTL 278

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449501918|ref|XP_004161494.1| PREDICTED: DNA-3-methyladenine glycosylase-like [Cucumis sativus]

 Score =  351 bits (900), Expect = 9e-95,   Method: Compositional matrix adjust.
 Identities = 164/195 (84%), Positives = 181/195 (92%)

Query: 1   MTILPHHFFQIDALDLAPRLLGKFLRRDDVLLQITEVEAYRPNDSACHGRFGITARTAPV 60
            TILP  FF +DALDLAPRLLGK +RRDDV+L+ITEVEAYRPNDSACHGRFG+TARTAPV
Sbjct: 84  FTILPKEFFLVDALDLAPRLLGKLIRRDDVVLRITEVEAYRPNDSACHGRFGVTARTAPV 143

Query: 61  FGPGGLAYVYLCYGLHTMLNVVADKEGVGAAVLIRSCAPVSGLKTIQQRRAQLTEKPVLL 120
           FGPGG AY+YLCYGLH MLNVVAD+ G+GAAVL+R+CAPVSGL+TIQ+RR  +T+KPVLL
Sbjct: 144 FGPGGHAYIYLCYGLHMMLNVVADEVGLGAAVLVRACAPVSGLETIQKRRGLITDKPVLL 203

Query: 121 TGPGKVGQALGISTEWSNHPLYMPGGLEILDGPKPEKILIGPRVGIEYALPEHVNALWRF 180
           TGPGKVGQALG+STEWSNHP Y PGGLE+LD PKPE IL+GPRVGIEYALPEHVNALWRF
Sbjct: 204 TGPGKVGQALGLSTEWSNHPFYTPGGLELLDAPKPESILVGPRVGIEYALPEHVNALWRF 263

Query: 181 AIAGTPWISAPKNTL 195
           AIAGTPWISAPKNTL
Sbjct: 264 AIAGTPWISAPKNTL 278

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357137891|ref|XP_003570532.1| PREDICTED: DNA-3-methyladenine glycosylase-like [Brachypodium distachyon]

 Score =  351 bits (900), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 165/195 (84%), Positives = 180/195 (92%)

Query: 4   LPHHFFQIDALDLAPRLLGKFLRRDDVLLQITEVEAYRPNDSACHGRFGITARTAPVFGP 63
           LP  FF++DALDLAPRLLGK LRRD V+L+ITEVEAYRPNDSACHGRFGITARTAPVFGP
Sbjct: 68  LPREFFEVDALDLAPRLLGKLLRRDQVVLRITEVEAYRPNDSACHGRFGITARTAPVFGP 127

Query: 64  GGLAYVYLCYGLHTMLNVVADKEGVGAAVLIRSCAPVSGLKTIQQRRAQLTEKPVLLTGP 123
           GG AYVYLCYGLH MLNVVADKEG+GAAVLIRSCAPVSGL+ IQQRR Q TEKP+LLTGP
Sbjct: 128 GGHAYVYLCYGLHMMLNVVADKEGIGAAVLIRSCAPVSGLEIIQQRRGQQTEKPILLTGP 187

Query: 124 GKVGQALGISTEWSNHPLYMPGGLEILDGPKPEKILIGPRVGIEYALPEHVNALWRFAIA 183
           GKVGQALG+ST+WSNHPLY+PGGLE+LDGP+P+ IL+GPRVGI+YA PEHV A WRFA A
Sbjct: 188 GKVGQALGLSTDWSNHPLYIPGGLEVLDGPEPKNILVGPRVGIDYASPEHVVAPWRFAFA 247

Query: 184 GTPWISAPKNTLMPQ 198
           GTPWISAPKNTL PQ
Sbjct: 248 GTPWISAPKNTLKPQ 262

Source: Brachypodium distachyon

Species: Brachypodium distachyon

Genus: Brachypodium

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|413939147|gb|AFW73698.1| DNA-3-methyladenine glycosylase [Zea mays]

 Score =  350 bits (899), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 166/195 (85%), Positives = 181/195 (92%)

Query: 4   LPHHFFQIDALDLAPRLLGKFLRRDDVLLQITEVEAYRPNDSACHGRFGITARTAPVFGP 63
           LP  FF++DALDLAPRLLGK LRRD+V+L+ITEVEAYRPNDSACHGRFGITARTAPVFGP
Sbjct: 68  LPRDFFEVDALDLAPRLLGKLLRRDEVVLRITEVEAYRPNDSACHGRFGITARTAPVFGP 127

Query: 64  GGLAYVYLCYGLHTMLNVVADKEGVGAAVLIRSCAPVSGLKTIQQRRAQLTEKPVLLTGP 123
           GG AYVYLCYGLH MLNVVAD EGVGAAVLIRSC+PVSGL+TIQ+RR Q TEKP+LLTGP
Sbjct: 128 GGHAYVYLCYGLHMMLNVVADIEGVGAAVLIRSCSPVSGLETIQRRRGQQTEKPILLTGP 187

Query: 124 GKVGQALGISTEWSNHPLYMPGGLEILDGPKPEKILIGPRVGIEYALPEHVNALWRFAIA 183
           GKVGQALG+ST+WSNHPLY PGGLE+LDGP+PE IL+GPRVGIEYA PEHV A WRFAIA
Sbjct: 188 GKVGQALGLSTDWSNHPLYAPGGLEVLDGPEPESILVGPRVGIEYASPEHVAAPWRFAIA 247

Query: 184 GTPWISAPKNTLMPQ 198
           GTPWISAPKNTL P+
Sbjct: 248 GTPWISAPKNTLRPR 262

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|115448991|ref|NP_001048275.1| Os02g0774500 [Oryza sativa Japonica Group] gi|113537806|dbj|BAF10189.1| Os02g0774500 [Oryza sativa Japonica Group] gi|215766797|dbj|BAG99025.1| unnamed protein product [Oryza sativa Japonica Group]

 Score =  349 bits (896), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 166/195 (85%), Positives = 180/195 (92%)

Query: 4   LPHHFFQIDALDLAPRLLGKFLRRDDVLLQITEVEAYRPNDSACHGRFGITARTAPVFGP 63
           LP  FF++DALDLAPRLLGK LRRD+V+L+ITEVEAYRPNDSACHGRFGITARTAPVFG 
Sbjct: 92  LPRDFFEVDALDLAPRLLGKLLRRDEVVLRITEVEAYRPNDSACHGRFGITARTAPVFGS 151

Query: 64  GGLAYVYLCYGLHTMLNVVADKEGVGAAVLIRSCAPVSGLKTIQQRRAQLTEKPVLLTGP 123
           GG AYVYLCYGLH MLNVVADKEGVGAAVLIRSCAPVSGL TIQQRR Q T+KP+LLTGP
Sbjct: 152 GGHAYVYLCYGLHMMLNVVADKEGVGAAVLIRSCAPVSGLATIQQRRGQQTDKPLLLTGP 211

Query: 124 GKVGQALGISTEWSNHPLYMPGGLEILDGPKPEKILIGPRVGIEYALPEHVNALWRFAIA 183
           GKVGQALG+ST+WSNHPLY PGGLE+LDGP+PE IL+GPRVGIEYA PEHV A WRFA+A
Sbjct: 212 GKVGQALGLSTDWSNHPLYTPGGLEVLDGPEPENILVGPRVGIEYASPEHVAAPWRFAVA 271

Query: 184 GTPWISAPKNTLMPQ 198
           GTPWISAPKNTL P+
Sbjct: 272 GTPWISAPKNTLRPR 286

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|326521346|dbj|BAJ96876.1| predicted protein [Hordeum vulgare subsp. vulgare]

 Score =  349 bits (895), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 165/195 (84%), Positives = 179/195 (91%)

Query: 4   LPHHFFQIDALDLAPRLLGKFLRRDDVLLQITEVEAYRPNDSACHGRFGITARTAPVFGP 63
           LP  FF++DALDLAPRLLGK LRRD V+L+ITEVEAYRPNDSACHGRFGITARTAPVFGP
Sbjct: 68  LPREFFEVDALDLAPRLLGKLLRRDQVVLRITEVEAYRPNDSACHGRFGITARTAPVFGP 127

Query: 64  GGLAYVYLCYGLHTMLNVVADKEGVGAAVLIRSCAPVSGLKTIQQRRAQLTEKPVLLTGP 123
           GG AYVYLCYGLH MLNVVADKEGVGAAVLIR+CAPVSGL+ IQQRR Q TEKP+LLTGP
Sbjct: 128 GGHAYVYLCYGLHMMLNVVADKEGVGAAVLIRACAPVSGLEIIQQRRGQQTEKPILLTGP 187

Query: 124 GKVGQALGISTEWSNHPLYMPGGLEILDGPKPEKILIGPRVGIEYALPEHVNALWRFAIA 183
           GKVGQALG+ST+WSNHPLY PGGLE+LD P+PE IL+GPRVGIEYA PEHV A WRFA+A
Sbjct: 188 GKVGQALGLSTDWSNHPLYTPGGLEVLDAPEPENILVGPRVGIEYASPEHVMAPWRFAVA 247

Query: 184 GTPWISAPKNTLMPQ 198
           GTPWISAPKNTL P+
Sbjct: 248 GTPWISAPKNTLRPR 262

Source: Hordeum vulgare subsp. vulgare

Species: Hordeum vulgare

Genus: Hordeum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	198
TAIR|locus:2088639	254	AT3G12040 [Arabidopsis thalian	0.994	0.775	0.808	8.6e-88
TIGR_CMR|CHY_1567	191	CHY_1567 "DNA-3-methyladenine	0.813	0.842	0.412	1.3e-22
TIGR_CMR|BA_0869	205	BA_0869 "methylpurine-DNA glyc	0.914	0.882	0.377	2.4e-21
MGI|MGI:97073	333	Mpg "N-methylpurine-DNA glycos	0.904	0.537	0.363	7.2e-20
UNIPROTKB|G5E9E2	281	MPG "N-methylpurine-DNA glycos	0.939	0.661	0.342	1.1e-18
UNIPROTKB|P29372	298	MPG "DNA-3-methyladenine glyco	0.939	0.624	0.342	1.1e-18
UNIPROTKB|Q5J9I4	293	PIG16 "Proliferation-inducing	0.939	0.634	0.342	1.1e-18
UNIPROTKB|E2QZX3	278	MPG "Uncharacterized protein"	0.904	0.643	0.36	2.8e-18
RGD|3106	317	Mpg "N-methylpurine-DNA glycos	0.914	0.570	0.356	4.6e-18
UNIPROTKB|P23571	317	Mpg "DNA-3-methyladenine glyco	0.914	0.570	0.356	4.6e-18

TAIR|locus:2088639 AT3G12040 [Arabidopsis thaliana (taxid:3702)]

 Score = 877 (313.8 bits), Expect = 8.6e-88, P = 8.6e-88
 Identities = 160/198 (80%), Positives = 182/198 (91%)

Query:     1 MTILPHHFFQIDALDLAPRLLGKFLRRDDVLLQITEVEAYRPNDSACHGRFGITARTAPV 60
             M ++P  FFQIDALDLAPRLLGKF+RRD+V+L+ITEVEAYRPNDSACHGRFG+T RTAPV
Sbjct:    56 MKLMPPEFFQIDALDLAPRLLGKFMRRDNVVLRITEVEAYRPNDSACHGRFGVTPRTAPV 115

Query:    61 FGPGGLAYVYLCYGLHTMLNVVADKEGVGAAVLIRSCAPVSGLKTIQQRRAQLTEKPVLL 120
             FGPGG AYVYLCYGLH MLN+VADKEGVGAAVLIRSC+PVSG++TIQ+RR   T+KPVLL
Sbjct:   116 FGPGGHAYVYLCYGLHMMLNIVADKEGVGAAVLIRSCSPVSGMETIQERRGLKTDKPVLL 175

Query:   121 TGPGKVGQALGISTEWSNHPLYMPGGLEILDGPKP-EKILIGPRVGIEYALPEHVNALWR 179
              GPGKVGQALG+STEWS+HPLY PGGLE+LDG +  EK+++GPRVGI+YALPEHVNALWR
Sbjct:   176 NGPGKVGQALGLSTEWSHHPLYSPGGLELLDGGEDVEKVMVGPRVGIDYALPEHVNALWR 235

Query:   180 FAIAGTPWISAPKNTLMP 197
             FA+A TPWISAPKNTL P
Sbjct:   236 FAVADTPWISAPKNTLKP 253

GO:0003677 "DNA binding" evidence=IEA;ISS

GO:0003824 "catalytic activity" evidence=IEA

GO:0003905 "alkylbase DNA N-glycosylase activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006284 "base-excision repair" evidence=IEA;ISS

TIGR_CMR|CHY_1567 CHY_1567 "DNA-3-methyladenine glycosylase" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)]

 Score = 262 (97.3 bits), Expect = 1.3e-22, P = 1.3e-22
 Identities = 71/172 (41%), Positives = 94/172 (54%)

Query:     3 ILPHHFFQIDALDLAPRLLGKFLRRD---DVLL-QITEVEAYRPNDSACHGRFGITARTA 58
             +LP  F+  D L +A  LL  +L R+    +L+ +I E EAY  ND ACH   G T R  
Sbjct:     2 LLPRQFYARDVLIVAKDLLNCYLVREYNGHLLIGKIVETEAYHQNDPACHAYRGKTKRNE 61

Query:    59 PVFGPGGLAYVYLCYGLHTMLNVVADKEGVGAAVLIRSCAPVSGLKTIQQRRAQLTEKPV 118
              +FGP G AYVY  YG+H   NVV    G   AVLIR+  PV G+  I+  R   +E+  
Sbjct:    62 VMFGPPGHAYVYFTYGMHYCFNVVTGAIGRAEAVLIRALEPVKGIDIIKTLRGGKSERE- 120

Query:   119 LLTGPGKVGQALGISTEWSNHPLYMPGG--LEILDG-PKPEK-ILIGPRVGI 166
             LL+GP K+ Q L I  + + H L   GG  L I  G P  E+ I++  R+GI
Sbjct:   121 LLSGPAKLTQGLAIDLKLNGHDL--TGGKILYITKGEPVAEEDIVVTTRIGI 170

GO:0006281 "DNA repair" evidence=ISS

GO:0019104 "DNA N-glycosylase activity" evidence=ISS

TIGR_CMR|BA_0869 BA_0869 "methylpurine-DNA glycosylase family protein" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 250 (93.1 bits), Expect = 2.4e-21, P = 2.4e-21
 Identities = 77/204 (37%), Positives = 107/204 (52%)

Query:     5 PHHFFQIDALDLAPRLLGKFL-------RRDDVLLQITEVEAYR-PNDSACHGRFGI-TA 55
             P  F++ D L++A +LLG+ L       +R  +   I EVEAY+ P+D A H   G  T 
Sbjct:     4 PPSFYEGDTLEVAKKLLGQKLVHIVNGIKRSGI---IVEVEAYKGPDDKAAHSYGGRRTD 60

Query:    56 RTAPVFGPGGLAYVYLCYGLHTMLNVVADKEGVGAAVLIRSCAPVSGLKTIQQRRAQLTE 115
             RT  +FG  G AYVYL YG++   NV+    G    VLIR+  PV G++ I+  R   T+
Sbjct:    61 RTEVMFGAPGHAYVYLIYGMYHCFNVITAPVGTPQGVLIRALEPVDGIEEIKLARYNKTD 120

Query:   116 --KPV---LLTGPGKVGQALGISTEWSNHPLYMPG-GLEILDGPK----PEKILIGPRVG 165
               K     L  GPGK+ +ALGI+ E     L      +E++   K      KI  GPR+ 
Sbjct:   121 ITKAQYKNLTNGPGKLCRALGITLEERGVSLQSDTLHIELVPEEKHISSQYKITAGPRIN 180

Query:   166 IEYALPEHVNALWRFAIAGTPWIS 189
             I+YA  E V+  WRF   G P++S
Sbjct:   181 IDYA-EEAVHYPWRFYYEGHPFVS 203

GO:0006281 "DNA repair" evidence=ISS

GO:0019104 "DNA N-glycosylase activity" evidence=ISS

MGI|MGI:97073 Mpg "N-methylpurine-DNA glycosylase" [Mus musculus (taxid:10090)]

 Score = 236 (88.1 bits), Expect = 7.2e-20, P = 7.2e-20
 Identities = 73/201 (36%), Positives = 99/201 (49%)

Query:     8 FFQIDALDLAPRLLGKFL-RR--DDVLLQ--ITEVEAYR-PNDSACHGRFGI-TARTAPV 60
             FF   A+ LA   LG+ L RR  D   L+  I E EAY  P D A H R G  T R   +
Sbjct:   110 FFDQPAVTLARAFLGQVLVRRLADGTELRGRIVETEAYLGPEDEAAHSRGGRQTPRNRGM 169

Query:    61 FGPGGLAYVYLCYGLHTMLNVVADKEGVGAAVLIRSCAPVSGLKTIQQRRAQLTEKPV-- 118
             F   G  YVYL YG++  LNV    +G GA VL+R+  P+ GL+T++Q R  L +  V  
Sbjct:   170 FMKPGTLYVYLIYGMYFCLNV--SSQGAGACVLLRALEPLEGLETMRQLRNSLRKSTVGR 227

Query:   119 ------LLTGPGKVGQALGISTEWSNHPLYMPGGLEILDGP----KPEKILIGPRVGIEY 168
                   L +GP K+ QAL I   +    L     + +  GP     P  ++   R+GI +
Sbjct:   228 SLKDRELCSGPSKLCQALAIDKSFDQRDLAQDDAVWLEHGPLESSSPAVVVAAARIGIGH 287

Query:   169 ALPEHVNALWRFAIAGTPWIS 189
             A  E      RF + G+PW+S
Sbjct:   288 A-GEWTQKPLRFYVQGSPWVS 307

GO:0003677 "DNA binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0003905 "alkylbase DNA N-glycosylase activity" evidence=IMP;IDA

GO:0005634 "nucleus" evidence=IEA

GO:0006281 "DNA repair" evidence=IEA

GO:0006284 "base-excision repair" evidence=IMP

GO:0006974 "response to DNA damage stimulus" evidence=IEA

GO:0008152 "metabolic process" evidence=IDA

GO:0008725 "DNA-3-methyladenine glycosylase activity" evidence=IEA

GO:0016787 "hydrolase activity" evidence=IEA

GO:0043916 "DNA-7-methylguanine glycosylase activity" evidence=IEA

GO:0052821 "DNA-7-methyladenine glycosylase activity" evidence=IEA

GO:0052822 "DNA-3-methylguanine glycosylase activity" evidence=IEA

UNIPROTKB|G5E9E2 MPG "N-methylpurine-DNA glycosylase, isoform CRA_b" [Homo sapiens (taxid:9606)]

 Score = 225 (84.3 bits), Expect = 1.1e-18, P = 1.1e-18
 Identities = 71/207 (34%), Positives = 106/207 (51%)

Query:     1 MTILPHHFFQIDALDLAPRLLGKFL-RR----DDVLLQITEVEAYR-PNDSACHGRFGI- 53
             +T L   FF   A+ LA   LG+ L RR     ++  +I E EAY  P D A H R G  
Sbjct:    66 LTRLGLEFFDQPAVPLARAFLGQVLVRRLPNGTELRGRIVETEAYLGPEDEAAHSRGGRQ 125

Query:    54 TARTAPVFGPGGLAYVYLCYGLHTMLNVVADKEGVGAAVLIRSCAPVSGLKTIQQRRAQL 113
             T R   +F   G  YVY+ YG++  +N+    +G GA VL+R+  P+ GL+T++Q R+ L
Sbjct:   126 TPRNRGMFMKPGTLYVYIIYGMYFCMNI--SSQGDGACVLLRALEPLEGLETMRQLRSTL 183

Query:   114 ---TEKPVL-----LTGPGKVGQALGISTEWSNHPLYMPGGLEILDGP-KPEK--ILIGP 162
                T   VL      +GP K+ QAL I+  +    L     + +  GP +P +  ++   
Sbjct:   184 RKGTASRVLKDRELCSGPSKLCQALAINKSFDQRDLAQDEAVWLERGPLEPSEPAVVAAA 243

Query:   163 RVGIEYALPEHVNALWRFAIAGTPWIS 189
             RVG+ +A  E      RF + G+PW+S
Sbjct:   244 RVGVGHA-GEWARKPLRFYVRGSPWVS 269

GO:0003677 "DNA binding" evidence=IEA

GO:0003905 "alkylbase DNA N-glycosylase activity" evidence=IEA

GO:0006284 "base-excision repair" evidence=IEA

UNIPROTKB|P29372 MPG "DNA-3-methyladenine glycosylase" [Homo sapiens (taxid:9606)]

 Score = 225 (84.3 bits), Expect = 1.1e-18, P = 1.1e-18
 Identities = 71/207 (34%), Positives = 106/207 (51%)

Query:     1 MTILPHHFFQIDALDLAPRLLGKFL-RR----DDVLLQITEVEAYR-PNDSACHGRFGI- 53
             +T L   FF   A+ LA   LG+ L RR     ++  +I E EAY  P D A H R G  
Sbjct:    83 LTRLGLEFFDQPAVPLARAFLGQVLVRRLPNGTELRGRIVETEAYLGPEDEAAHSRGGRQ 142

Query:    54 TARTAPVFGPGGLAYVYLCYGLHTMLNVVADKEGVGAAVLIRSCAPVSGLKTIQQRRAQL 113
             T R   +F   G  YVY+ YG++  +N+    +G GA VL+R+  P+ GL+T++Q R+ L
Sbjct:   143 TPRNRGMFMKPGTLYVYIIYGMYFCMNI--SSQGDGACVLLRALEPLEGLETMRQLRSTL 200

Query:   114 ---TEKPVL-----LTGPGKVGQALGISTEWSNHPLYMPGGLEILDGP-KPEK--ILIGP 162
                T   VL      +GP K+ QAL I+  +    L     + +  GP +P +  ++   
Sbjct:   201 RKGTASRVLKDRELCSGPSKLCQALAINKSFDQRDLAQDEAVWLERGPLEPSEPAVVAAA 260

Query:   163 RVGIEYALPEHVNALWRFAIAGTPWIS 189
             RVG+ +A  E      RF + G+PW+S
Sbjct:   261 RVGVGHA-GEWARKPLRFYVRGSPWVS 286

GO:0008725 "DNA-3-methyladenine glycosylase activity" evidence=IEA

GO:0043916 "DNA-7-methylguanine glycosylase activity" evidence=IEA

GO:0052821 "DNA-7-methyladenine glycosylase activity" evidence=IEA

GO:0052822 "DNA-3-methylguanine glycosylase activity" evidence=IEA

GO:0003684 "damaged DNA binding" evidence=TAS

GO:0006307 "DNA dealkylation involved in DNA repair" evidence=TAS

GO:0005654 "nucleoplasm" evidence=TAS

GO:0006281 "DNA repair" evidence=TAS

GO:0006284 "base-excision repair" evidence=TAS

GO:0006285 "base-excision repair, AP site formation" evidence=TAS

GO:0045007 "depurination" evidence=TAS

GO:0005515 "protein binding" evidence=IPI

UNIPROTKB|Q5J9I4 PIG16 "Proliferation-inducing protein 16" [Homo sapiens (taxid:9606)]

 Score = 225 (84.3 bits), Expect = 1.1e-18, P = 1.1e-18
 Identities = 71/207 (34%), Positives = 106/207 (51%)

Query:     1 MTILPHHFFQIDALDLAPRLLGKFL-RR----DDVLLQITEVEAYR-PNDSACHGRFGI- 53
             +T L   FF   A+ LA   LG+ L RR     ++  +I E EAY  P D A H R G  
Sbjct:    78 LTRLGLEFFDQPAVPLARAFLGQVLVRRLPNGTELRGRIVETEAYLGPEDEAAHSRGGRQ 137

Query:    54 TARTAPVFGPGGLAYVYLCYGLHTMLNVVADKEGVGAAVLIRSCAPVSGLKTIQQRRAQL 113
             T R   +F   G  YVY+ YG++  +N+    +G GA VL+R+  P+ GL+T++Q R+ L
Sbjct:   138 TPRNRGMFMKPGTLYVYIIYGMYFCMNI--SSQGDGACVLLRALEPLEGLETMRQLRSTL 195

Query:   114 ---TEKPVL-----LTGPGKVGQALGISTEWSNHPLYMPGGLEILDGP-KPEK--ILIGP 162
                T   VL      +GP K+ QAL I+  +    L     + +  GP +P +  ++   
Sbjct:   196 RKGTASRVLKDRELCSGPSKLCQALAINKSFDQRDLAQDEAVWLERGPLEPSEPAVVAAA 255

Query:   163 RVGIEYALPEHVNALWRFAIAGTPWIS 189
             RVG+ +A  E      RF + G+PW+S
Sbjct:   256 RVGVGHA-GEWARKPLRFYVRGSPWVS 281

GO:0003677 "DNA binding" evidence=IEA

GO:0003905 "alkylbase DNA N-glycosylase activity" evidence=IEA

GO:0006284 "base-excision repair" evidence=IEA

UNIPROTKB|E2QZX3 MPG "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 221 (82.9 bits), Expect = 2.8e-18, P = 2.8e-18
 Identities = 72/200 (36%), Positives = 101/200 (50%)

Query:     8 FFQIDALDLAPRLLGKFL-RR-DD---VLLQITEVEAYR-PNDSACHGRFGI-TARTAPV 60
             FF   A+ LA   LG+ L RR DD   +  +I E EAY  P D A H R G  T R   +
Sbjct:    70 FFDQPAVALARAFLGQVLVRRLDDGTELRGRIVETEAYLGPEDEAAHSRGGRQTPRNRGM 129

Query:    61 FGPGGLAYVYLCYGLHTMLNVVADKEGVGAAVLIRSCAPVSGLKTIQQRRAQL----TEK 116
             F   G  YVY+ YG++  LNV    +G GA VL+R+  P+ GL+T++Q R+ L    T +
Sbjct:   130 FMKPGTLYVYIIYGMYFCLNV--SSQGDGACVLLRALEPLGGLETMRQLRSTLRKGTTGR 187

Query:   117 PV----LLTGPGKVGQALGISTEWSNHPLYMPGGLEIL---DGPKPEKILIGPRVGIEYA 169
              +    L +GP K+ QAL I   +    L     + +     GP    ++   RVGI +A
Sbjct:   188 ALKDRELCSGPSKLCQALAIDKSFDQRDLAKDRAVWLERSPPGPSEPAVVAAARVGIGHA 247

Query:   170 LPEHVNALWRFAIAGTPWIS 189
               E      RF + G+PW+S
Sbjct:   248 -GEWAQKPLRFYLRGSPWVS 266

GO:0006284 "base-excision repair" evidence=IEA

GO:0003905 "alkylbase DNA N-glycosylase activity" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

RGD|3106 Mpg "N-methylpurine-DNA glycosylase" [Rattus norvegicus (taxid:10116)]

 Score = 219 (82.2 bits), Expect = 4.6e-18, P = 4.6e-18
 Identities = 72/202 (35%), Positives = 97/202 (48%)

Query:     5 PHHFFQIDALDLAPRLLGKFL-RR--DDVLLQ--ITEVEAYR-PNDSACHGRFGI-TART 57
             P +F Q  A+ LA   LG+ L RR  D   L+  I E EAY  P D A H R G  T R 
Sbjct:    94 PEYFDQ-PAVTLARAFLGQVLVRRLADGTELRGRIVETEAYLGPEDEAAHSRGGRQTPRN 152

Query:    58 APVFGPGGLAYVYLCYGLHTMLNVVADKEGVGAAVLIRSCAPVSGLKTIQQRRAQLTEKP 117
               +F   G  YVYL YG++  LNV    +G GA VL+R+  P+ GL+T++Q R  L +  
Sbjct:   153 RGMFMKPGTLYVYLIYGMYFCLNV--SSQGAGACVLLRALEPLEGLETMRQLRNSLRKST 210

Query:   118 V--------LLTGPGKVGQALGISTEWSNHPLYMPGGLEILDGP--KPEKILIGPRVGIE 167
             V        L  GP K+ QAL  S  +    L     + +  GP       ++    GI 
Sbjct:   211 VGRSLKDRELCNGPSKLCQALARSKSFDQRDLAQDEAVWLEHGPLESSSPAVVAAAAGIG 270

Query:   168 YALPEHVNALWRFAIAGTPWIS 189
             +A  E      RF + G+PW+S
Sbjct:   271 HA-GEWTQKPLRFYVQGSPWVS 291

GO:0003677 "DNA binding" evidence=IEA

GO:0003905 "alkylbase DNA N-glycosylase activity" evidence=IEA;ISO

GO:0005634 "nucleus" evidence=IEA

GO:0006284 "base-excision repair" evidence=IEA;ISO

GO:0008152 "metabolic process" evidence=ISO

GO:0008725 "DNA-3-methyladenine glycosylase activity" evidence=IEA

GO:0043916 "DNA-7-methylguanine glycosylase activity" evidence=IEA

GO:0052821 "DNA-7-methyladenine glycosylase activity" evidence=IEA

GO:0052822 "DNA-3-methylguanine glycosylase activity" evidence=IEA

UNIPROTKB|P23571 Mpg "DNA-3-methyladenine glycosylase" [Rattus norvegicus (taxid:10116)]

 Score = 219 (82.2 bits), Expect = 4.6e-18, P = 4.6e-18
 Identities = 72/202 (35%), Positives = 97/202 (48%)

Query:     5 PHHFFQIDALDLAPRLLGKFL-RR--DDVLLQ--ITEVEAYR-PNDSACHGRFGI-TART 57
             P +F Q  A+ LA   LG+ L RR  D   L+  I E EAY  P D A H R G  T R 
Sbjct:    94 PEYFDQ-PAVTLARAFLGQVLVRRLADGTELRGRIVETEAYLGPEDEAAHSRGGRQTPRN 152

Query:    58 APVFGPGGLAYVYLCYGLHTMLNVVADKEGVGAAVLIRSCAPVSGLKTIQQRRAQLTEKP 117
               +F   G  YVYL YG++  LNV    +G GA VL+R+  P+ GL+T++Q R  L +  
Sbjct:   153 RGMFMKPGTLYVYLIYGMYFCLNV--SSQGAGACVLLRALEPLEGLETMRQLRNSLRKST 210

Query:   118 V--------LLTGPGKVGQALGISTEWSNHPLYMPGGLEILDGP--KPEKILIGPRVGIE 167
             V        L  GP K+ QAL  S  +    L     + +  GP       ++    GI 
Sbjct:   211 VGRSLKDRELCNGPSKLCQALARSKSFDQRDLAQDEAVWLEHGPLESSSPAVVAAAAGIG 270

Query:   168 YALPEHVNALWRFAIAGTPWIS 189
             +A  E      RF + G+PW+S
Sbjct:   271 HA-GEWTQKPLRFYVQGSPWVS 291

GO:0003677 "DNA binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q137C7	3MGH_RHOPS	3, ., 2, ., 2, ., -	0.3756	0.9242	0.9059	yes	no
Q8NU33	3MGH_CORGL	3, ., 2, ., 2, ., -	0.4	0.9242	0.9682	yes	no
Q6A5L3	3MGH_PROAC	3, ., 2, ., 2, ., -	0.3670	0.8838	0.9162	yes	no
Q2K4W8	3MGH_RHIEC	3, ., 2, ., 2, ., -	0.3924	0.8686	0.8643	yes	no
Q5YYA5	3MGH_NOCFA	3, ., 2, ., 2, ., -	0.3578	0.9545	0.8915	yes	no
Q9Z847	3MGH_CHLPN	3, ., 2, ., 2, ., -	0.4126	0.9040	0.9132	yes	no
A5IG48	3MGH_LEGPC	3, ., 2, ., 2, ., -	0.4030	0.8787	0.9508	yes	no
Q5ZX66	3MGH_LEGPH	3, ., 2, ., 2, ., -	0.4021	0.8434	0.9125	yes	no
Q253J9	3MGH_CHLFF	3, ., 2, ., 2, ., -	0.4032	0.8888	0.9072	yes	no
Q5WY41	3MGH_LEGPL	3, ., 2, ., 2, ., -	0.4132	0.8787	0.9508	yes	no
Q0SN86	3MGH_BORAP	3, ., 2, ., 2, ., -	0.3686	0.8686	0.9247	yes	no
B8JBU6	3MGH_ANAD2	3, ., 2, ., 2, ., -	0.3854	0.8686	0.8190	yes	no
Q824B4	3MGH_CHLCV	3, ., 2, ., 2, ., -	0.4171	0.8838	0.9210	yes	no
Q39147	3MG_ARATH	3, ., 2, ., 2, ., 2, 1	0.8080	0.9949	0.7755	yes	no
A3CTY6	3MGH_METMJ	3, ., 2, ., 2, ., -	0.4009	0.8686	0.8958	yes	no
B7J1Z1	3MGH_BORBZ	3, ., 2, ., 2, ., -	0.3636	0.8686	0.9247	yes	no
B2A7A8	3MGH_NATTJ	3, ., 2, ., 2, ., -	0.3794	0.9343	0.9343	yes	no
Q8UAN8	3MGH_AGRT5	3, ., 2, ., 2, ., -	0.3957	0.8888	0.9119	yes	no
Q661J6	3MGH_BORGA	3, ., 2, ., 2, ., -	0.3484	0.8686	0.9247	yes	no
B4UIZ5	3MGH_ANASK	3, ., 2, ., 2, ., -	0.3906	0.8686	0.8190	yes	no
A1BI83	3MGH_CHLPD	3, ., 2, ., 2, ., -	0.3592	0.9292	0.9387	yes	no
Q2IW19	3MGH_RHOP2	3, ., 2, ., 2, ., -	0.4095	0.9191	0.9054	yes	no
Q3J3U4	3MGH_RHOS4	3, ., 2, ., 2, ., -	0.3978	0.8535	0.8578	yes	no
Q6N6M8	3MGH_RHOPA	3, ., 2, ., 2, ., -	0.3862	0.9242	0.8883	yes	no
B2THZ1	3MGH_CLOBB	3, ., 2, ., 2, ., -	0.3712	0.9494	0.9306	yes	no
A7HIL2	3MGH_ANADF	3, ., 2, ., 2, ., -	0.375	0.8686	0.8865	yes	no
Q4LBY8	3MGH_SODGL	3, ., 2, ., 2, ., -	0.3756	0.8131	0.9470	yes	no
Q5X6N6	3MGH_LEGPA	3, ., 2, ., 2, ., -	0.4021	0.8434	0.9125	yes	no
Q2IHD7	3MGH_ANADE	3, ., 2, ., 2, ., -	0.3958	0.8686	0.8309	yes	no
Q0W5C8	3MGH_UNCMA	3, ., 2, ., 2, ., -	0.3865	0.9494	0.94	yes	no
Q92TT1	3MGH_RHIME	3, ., 2, ., 2, ., -	0.4175	0.8737	0.9351	yes	no
A8MF35	3MGH_ALKOO	3, ., 2, ., 2, ., -	0.3718	0.9343	0.9158	yes	no
B3QKY6	3MGH_CHLP8	3, ., 2, ., 2, ., -	0.3861	0.9292	0.8803	yes	no
A6LPI2	3MGH_CLOB8	3, ., 2, ., 2, ., -	0.3694	0.9494	0.9261	yes	no
Q8KBD5	3MGH_CHLTE	3, ., 2, ., 2, ., -	0.3718	0.9444	0.8947	yes	no
Q896H4	3MGH_CLOTE	3, ., 2, ., 2, ., -	0.365	0.9343	0.9113	yes	no
O51383	3MGH_BORBU	3, ., 2, ., 2, ., -	0.3636	0.8686	0.9247	yes	no
Q5L6N0	3MGH_CHLAB	3, ., 2, ., 2, ., -	0.3947	0.8888	0.9263	yes	no
B2UXQ2	3MGH_CLOBA	3, ., 2, ., 2, ., -	0.3762	0.9494	0.9306	yes	no
Q89LR7	3MGH_BRAJA	3, ., 2, ., 2, ., -	0.3641	0.8989	0.89	yes	no
Q3B622	3MGH_PELLD	3, ., 2, ., 2, ., -	0.3869	0.9141	0.9234	yes	no
Q3JEY0	3MGH_NITOC	3, ., 2, ., 2, ., -	0.5532	0.9797	0.9651	yes	no
Q214R5	3MGH_RHOPB	3, ., 2, ., 2, ., -	0.3947	0.9090	0.9	yes	no
Q2Y9K4	3MGH_NITMU	3, ., 2, ., 2, ., -	0.3825	0.8939	0.9170	yes	no
Q3ABT8	3MGH_CARHZ	3, ., 2, ., 2, ., -	0.3692	0.9090	0.9424	yes	no
A4QAA8	3MGH_CORGB	3, ., 2, ., 2, ., -	0.4052	0.9242	0.8714	yes	no
A4J510	3MGH_DESRM	3, ., 2, ., 2, ., -	0.3724	0.9141	0.9526	yes	no
Q3SSP2	3MGH_NITWN	3, ., 2, ., 2, ., -	0.3804	0.8989	0.8557	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.2.2.21	0.991
3rd Layer	3.2.2	0.976

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	estExt_fgenesh4_pm.C_LG_XVI0187	hypothetical protein (198 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	gw1.X.1153.1	hypothetical protein; Excises uracil residues from the DNA which can arise as a result of misin [...] (216 aa)							•		0.672
	eugene3.27440001	Peptide exporter, ABC transporter family protein (648 aa)	•						•		0.554
	gw1.130.69.1	N-acetyl-gamma-glutamyl-phosphate reductase (EC-1.2.1.38) (352 aa)	•								0.503
	gw1.XVI.1419.1	hypothetical protein (428 aa)							•		0.502
	estExt_fgenesh4_pm.C_LG_II0485	argininosuccinate lyase (EC-4.3.2.1) (461 aa)	•								0.501
	estExt_Genewise1_v1.C_2320006	hypothetical protein (482 aa)	•								0.466
	gw1.V.1402.1	SubName- Full=Putative uncharacterized protein; (326 aa)	•								0.443

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	198
TIGR00567	192	TIGR00567, 3mg, DNA-3-methyladenine glycosylase (3	1e-84
cd00540	187	cd00540, AAG, Alkyladenine DNA glycosylase catalyz	1e-71
pfam02245	185	pfam02245, Pur_DNA_glyco, Methylpurine-DNA glycosy	1e-70
PRK00802	188	PRK00802, PRK00802, 3-methyladenine DNA glycosylas	2e-61
COG2094	200	COG2094, Mpg, 3-methyladenine DNA glycosylase [DNA	8e-58

>gnl|CDD|129658 TIGR00567, 3mg, DNA-3-methyladenine glycosylase (3mg)

 Score =  248 bits (634), Expect = 1e-84
 Identities = 91/193 (47%), Positives = 116/193 (60%), Gaps = 8/193 (4%)

Query: 4   LPHHFFQIDALDLAPRLLGKFLRR-----DDVLLQITEVEAYR-PNDSACHGRFG-ITAR 56
           +P  FFQ DA+ LAPRLLG+ L R      +V  +I E EAY  P DSA H R G  T R
Sbjct: 1   MPPEFFQQDAVTLAPRLLGQLLVRRLDKGTEVRGRIVETEAYMGPEDSAAHSRGGRQTPR 60

Query: 57  TAPVFGPGGLAYVYLCYGLHTMLNVVADKEGVGAAVLIRSCAPVSGLKTIQQRRAQLTEK 116
           T  +FGP G  YVY+ YG+H MLNVVA  EGV AAVLIR+  P+ GL+ +++RR +  + 
Sbjct: 61  TRGMFGPPGRLYVYIIYGMHYMLNVVAAPEGVPAAVLIRALEPLEGLELMRERRGRSLKD 120

Query: 117 PVLLTGPGKVGQALGISTEWSNHPLYMPGGLEILDGPKPEKILIGPRVGIEYALPEHVNA 176
             L  GPGK+ QALGI+  ++   L  P  L +  GP       GPRVGI+YA    +  
Sbjct: 121 RELTNGPGKLCQALGITMSFNGRDLIQPSALWLERGPLEHSAPAGPRVGIDYAGEWDI-K 179

Query: 177 LWRFAIAGTPWIS 189
            WRF + G PW+S
Sbjct: 180 PWRFYVTGNPWVS 192

This families are based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). All proteins in this family for which the function is known are involved in the base excision repair of alkylation damage to DNA. The exact specificty of the type of alkylation damage repaired by each of these varies somewhat between species. Substrates include 3-methyl adenine, 7-methyl-guanaine, and 3-methyl-guanine [DNA metabolism, DNA replication, recombination, and repair]. Length = 192

>gnl|CDD|187726 cd00540, AAG, Alkyladenine DNA glycosylase catalyzes the first step in base excision repair

 Score =  215 bits (549), Expect = 1e-71
 Identities = 86/189 (45%), Positives = 109/189 (57%), Gaps = 9/189 (4%)

Query: 8   FFQIDALDLAPRLLGKFLRRDD----VLLQITEVEAYR-PNDSACHGRFGITARTAPVFG 62
           FF  DAL++A  LLGK L R      +  +I E EAY  P+D A H   G T R   +FG
Sbjct: 1   FFDRDALEVARELLGKVLVRRLPGGVLSGRIVETEAYLGPDDPASHAYRGRTTRREAMFG 60

Query: 63  PGGLAYVYLCYGLHTMLNVVADKEGVGAAVLIRSCAPVSGLKTIQQRRAQLTEKPVLLTG 122
           P G AYVYL YG+H  LNVV   EG  AAVLIR+  P+ GL  +++RR        L  G
Sbjct: 61  PPGTAYVYLIYGMHHCLNVVTGPEGEPAAVLIRALEPLEGLDLMRRRR-GKKRGRELTNG 119

Query: 123 PGKVGQALGISTEWSNHPLYMPGGLEILDGPK--PEKILIGPRVGIEYALPEHVNALWRF 180
           PGK+ QALGI    +   L  P GL I DG +  PE+I+  PR+GI+YA  E  +  WRF
Sbjct: 120 PGKLCQALGIDKSLNGLDLTDPSGLWIEDGGERPPEEIVATPRIGIDYA-GEAADKPWRF 178

Query: 181 AIAGTPWIS 189
            + G P++S
Sbjct: 179 YVKGNPFVS 187

Alkyladenine DNA glycosylase (AAG), also known as 3-methyladenine DNA glycosylase, catalyzes the first step in base excision repair (BER) by cleaving damaged DNA bases within double-stranded DNA to produce an abasic site. AAG bends DNA by intercalating between the base pairs, causing the damaged base to flip out of the double helix and into the enzyme active site for cleavage. Although AAG represents one of six DNA glycosylase classes, it lacks the helix-hairpin-helix active site motif associated with other BER glycosylases and is structurally distinct from them. Length = 187

>gnl|CDD|216945 pfam02245, Pur_DNA_glyco, Methylpurine-DNA glycosylase (MPG)

 Score =  211 bits (541), Expect = 1e-70
 Identities = 85/190 (44%), Positives = 108/190 (56%), Gaps = 12/190 (6%)

Query: 5   PHHFFQIDALDLAPRLLGKFLRRDD----VLLQITEVEAYR-PNDSACHGRFGITARTAP 59
           P  FF  D L++A  LLGK L R      +  +I E EAY  P+D A H   G T R A 
Sbjct: 1   PREFFARDTLEVARDLLGKVLVRRLPGGTLSGRIVETEAYLGPDDPASHAYRGRTPRNAV 60

Query: 60  VFGPGGLAYVYLCYGLHTMLNVVADKEGVGAAVLIRSCAPVSGLKTIQQRRAQLTEKPVL 119
           +FGP G AYVYL YG+H  LNVV + EGV AAVLIR+  P+ GL  +++RR    ++   
Sbjct: 61  MFGPPGHAYVYLIYGMHHCLNVVTEPEGVPAAVLIRAIEPLEGLDLMRRRRG--GKRERD 118

Query: 120 LT-GPGKVGQALGISTEWSNHPLYMPGGLEILDGPK-PEKILIGPRVGIEYALPEHVNAL 177
           LT GPGK+ QALGI    +   L  P  L + D    PE+I+  PR+GI     E  +  
Sbjct: 119 LTNGPGKLCQALGIDRSHNGRDLTGPPPLWLEDDGVPPEEIVTTPRIGIS---GEAADLP 175

Query: 178 WRFAIAGTPW 187
           WRF IAG P+
Sbjct: 176 WRFYIAGNPF 185

Methylpurine-DNA glycosylase is a base excision-repair protein. It is responsible for the hydrolysis of the deoxyribose N-glycosidic bond, excising 3-methyladenine and 3-methylguanine from damaged DNA. Length = 185

>gnl|CDD|234840 PRK00802, PRK00802, 3-methyladenine DNA glycosylase; Reviewed

 Score =  188 bits (481), Expect = 2e-61
 Identities = 82/191 (42%), Positives = 109/191 (57%), Gaps = 6/191 (3%)

Query: 1   MTILPHHFFQIDALDLAPRLLGKFLR-RDDVLLQITEVEAYR-PNDSACHGRFGITARTA 58
              LP  FF  DAL++A  LLGK L     V  +I E EAY   +D A H   G T RT 
Sbjct: 2   GMPLPREFFARDALEVARDLLGKVLVHEGGVSGRIVETEAYIGADDPASHSYRGRTPRTE 61

Query: 59  PVFGPGGLAYVYLCYGLHTMLNVVADKEGVGAAVLIRSCAPVSGLKTIQQRRAQLTEKPV 118
            +FGP G AYVY  YG+H  LNVV   EG GAAVLIR+  P+ G+  +++RR     +  
Sbjct: 62  VMFGPPGHAYVYFIYGMHHCLNVVCGPEGTGAAVLIRALEPLEGIALMRRRRGGKRPEKN 121

Query: 119 LLTGPGKVGQALGISTEWSNHPLYMPGGLEILDGPKPEKILIGPRVGIEYALPEHVNALW 178
           L  GPGK+ +ALGI+   +   L+    L I DG +P +I+ GPR+GI     +  +  W
Sbjct: 122 LCNGPGKLCKALGITLADNGADLFDASPLYIEDGKEPPEIVAGPRIGI----SKARDLPW 177

Query: 179 RFAIAGTPWIS 189
           RF I G+P++S
Sbjct: 178 RFWIPGSPFVS 188

Length = 188

>gnl|CDD|225005 COG2094, Mpg, 3-methyladenine DNA glycosylase [DNA replication, recombination, and repair]

 Score =  180 bits (458), Expect = 8e-58
 Identities = 84/200 (42%), Positives = 106/200 (53%), Gaps = 13/200 (6%)

Query: 1   MTILPHHFFQIDALDLAPRLLGKFLRRDD----VLLQITEVEAYR-PNDSACHGRFGITA 55
           +  LP  FF  D L +A  LLGK L R         +I E EAY  P+D ACH   G T 
Sbjct: 3   LMPLPRSFFARDTLVVARELLGKTLVRRIGGLTTSGRIVETEAYLGPDDPACHAYRGRTK 62

Query: 56  RTAPVFGPGGLAYVYLCYGLHTMLNVVADKEGVGAAVLIRSCAPVSGLKTIQQRRAQLTE 115
           R   +FGP G AYVY  YG+H  LNVV   EG+ AAVLIR+  P  G++ ++QRR     
Sbjct: 63  RNRAMFGPPGHAYVYRIYGMHYCLNVVTGPEGIPAAVLIRAIEPEEGIEPMRQRRGV--R 120

Query: 116 KPVLLT-GPGKVGQALGISTEWSNHPLYMPG-GLEILDGPKPEKILIGPRVGIEYALPEH 173
              LLT GPGK+ +ALGI+ E +   L  P   L +  G  P  I  G R+GI  A    
Sbjct: 121 VLRLLTNGPGKLCKALGITREDNGADLINPSEPLWLELGKTPFAISAGARIGISKA---- 176

Query: 174 VNALWRFAIAGTPWISAPKN 193
            +  WRF I G P++S  + 
Sbjct: 177 TDKPWRFYITGNPFVSRRRR 196

Length = 200

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	198
TIGR00567	192	3mg DNA-3-methyladenine glycosylase (3mg). This fa	100.0
PRK00802	188	3-methyladenine DNA glycosylase; Reviewed	100.0
PF02245	184	Pur_DNA_glyco: Methylpurine-DNA glycosylase (MPG);	100.0
COG2094	200	Mpg 3-methyladenine DNA glycosylase [DNA replicati	100.0
cd00540	179	AAG Alkyladenine DNA glycosylase (AAG), also known	100.0
KOG4486	261	consensus 3-methyladenine DNA glycosylase [Replica	100.0
PF12006	313	DUF3500: Protein of unknown function (DUF3500); In	80.96

>TIGR00567 3mg DNA-3-methyladenine glycosylase (3mg)

Probab=100.00  E-value=2e-86  Score=557.31  Aligned_cols=185  Identities=49%  Similarity=0.796  Sum_probs=172.3

Q ss_pred             CCcccCCCCHHhHHhhhcCCeEEecC----e-eEEEEEeeccC-CCCCccccCCCC-CCCcccccCCCCeeEEEEecCce
Q 029132            4 LPHHFFQIDALDLAPRLLGKFLRRDD----V-LLQITEVEAYR-PNDSACHGRFGI-TARTAPVFGPGGLAYVYLCYGLH   76 (198)
Q Consensus         4 l~~~Ff~~~~~~vA~~LLG~~Lv~~~----~-~grIVEtEAY~-~~D~AsHa~~gr-T~Rn~~mfg~~G~~YVY~~YGmh   76 (198)
                      |+++||++|+++||++||||+||++.    . +|+|||||||+ ++|||||||+|| |+||++||++|||+|||+|||||
T Consensus         1 l~~~Ff~~~~~~vA~~LLGk~Lv~~~~~g~~~~grIvEtEAY~G~~D~A~Ha~~grrT~Rn~~mfg~~G~~YVY~~YGmh   80 (192)
T TIGR00567         1 MPPEFFQQDAVTLAPRLLGQLLVRRLDKGTEVRGRIVETEAYMGPEDSAAHSRGGRQTPRTRGMFGPPGRLYVYIIYGMH   80 (192)
T ss_pred             CCHHHhcCCHHHHHHHhCCCEEEEECCCCcEEEEEEEEEecccCCCCccccccCCCCCcchHHHccCCceEEEEEecCCE
Confidence            68899999999999999999999852    3 69999999999 899999999996 99999999999999999999999


Q ss_pred             eEEEEEeCCCCCccEEEeeeccccCCHHHHHHHhcccCCCCcccCChhHHHHHhcCCcccCCCCCCCCCceEEcCCCCCC
Q 029132           77 TMLNVVADKEGVGAAVLIRSCAPVSGLKTIQQRRAQLTEKPVLLTGPGKVGQALGISTEWSNHPLYMPGGLEILDGPKPE  156 (198)
Q Consensus        77 ~clNvvt~~~g~~~aVLIRA~eP~~G~~~m~~~R~~~~~~~~L~nGPGkL~~AlgI~~~~~g~~l~~~~~l~l~~~~~~~  156 (198)
                      |||||||+++|.|+||||||+||++|++.|++||+.....++|||||||||||||||+++||.||++++.|||+++..+.
T Consensus        81 ~~lNvVt~~~g~p~aVLIRA~ep~~G~~~m~~~R~~~~~~~~L~nGPGkL~~ALgI~~~~ng~~l~~~~~l~i~~~~~~~  160 (192)
T TIGR00567        81 YMLNVVAAPEGVPAAVLIRALEPLEGLELMRERRGRSLKDRELTNGPGKLCQALGITMSFNGRDLIQPSALWLERGPLEH  160 (192)
T ss_pred             EEEEEEECCCCCccEEEEEeccccCchHHHHHhcCCCccccccccCHHHHHHHhCCCHHHCCCcccCCCceEEecCCCCC
Confidence            99999999999999999999999999999999997644346899999999999999999999999876579998765556


Q ss_pred             ceeecceeeecCCCccccCceeeEEECCCCeec
Q 029132          157 KILIGPRVGIEYALPEHVNALWRFAIAGTPWIS  189 (198)
Q Consensus       157 ~I~~t~RIGI~~a~~e~~~~pwRf~i~gnp~VS  189 (198)
                      +|.+||||||++++ ||+++|||||++||||||
T Consensus       161 ~i~~t~RIGI~~a~-~~~~~pwRf~v~~n~~VS  192 (192)
T TIGR00567       161 SAPAGPRVGIDYAG-EWDIKPWRFYVTGNPWVS  192 (192)
T ss_pred             ceeeeCcccccCcc-ccccCCcEEEECCCcccC
Confidence            79999999999996 799999999999999998

This families are based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). All proteins in this family for which the function is known are involved in the base excision repair of alkylation damage to DNA. The exact specificty of the type of alkylation damage repaired by each of these varies somewhat between species. Substrates include 3-methyl adenine, 7-methyl-guanaine, and 3-methyl-guanine.

>PRK00802 3-methyladenine DNA glycosylase; Reviewed

Probab=100.00  E-value=2.3e-85  Score=549.36  Aligned_cols=185  Identities=44%  Similarity=0.719  Sum_probs=171.8

Q ss_pred             CCCCCcccCCCCHHhHHhhhcCCeEEec-CeeEEEEEeeccC-CCCCccccCCCCCCCcccccCCCCeeEEEEecCceeE
Q 029132            1 MTILPHHFFQIDALDLAPRLLGKFLRRD-DVLLQITEVEAYR-PNDSACHGRFGITARTAPVFGPGGLAYVYLCYGLHTM   78 (198)
Q Consensus         1 m~~l~~~Ff~~~~~~vA~~LLG~~Lv~~-~~~grIVEtEAY~-~~D~AsHa~~grT~Rn~~mfg~~G~~YVY~~YGmh~c   78 (198)
                      +++|+++||++|+++||++||||+||++ .++|||||||||+ ++|||||||+|||+||++||++|||+|||+|||||||
T Consensus         2 ~~~l~~~Ff~~~~~~vA~~LLGk~Lv~~~~~~grIvETEAY~G~~D~A~Ha~~grT~Rn~~mf~~~G~~YVY~~YG~h~~   81 (188)
T PRK00802          2 GMPLPREFFARDALEVARDLLGKVLVHEGGVSGRIVETEAYIGADDPASHSYRGRTPRTEVMFGPPGHAYVYFIYGMHHC   81 (188)
T ss_pred             CCccCHHHHCCCHHHHHHHhCCCEEEECCEEEEEEEEEecccCCCCccccccCCCChhhHHHcCCCceEEEEEecCceeE
Confidence            3578999999999999999999999995 5789999999999 8999999999999999999999999999999999999


Q ss_pred             EEEEeCCCCCccEEEeeeccccCCHHHHHHHhcccCCCCcccCChhHHHHHhcCCcccCCCCCCCCCceEEcCCCCCCce
Q 029132           79 LNVVADKEGVGAAVLIRSCAPVSGLKTIQQRRAQLTEKPVLLTGPGKVGQALGISTEWSNHPLYMPGGLEILDGPKPEKI  158 (198)
Q Consensus        79 lNvvt~~~g~~~aVLIRA~eP~~G~~~m~~~R~~~~~~~~L~nGPGkL~~AlgI~~~~~g~~l~~~~~l~l~~~~~~~~I  158 (198)
                      |||||+++|.|+||||||+||++|++.|++||+.+...++|||||||||||||||+++||++|++++.|||++...+.+|
T Consensus        82 lNvVt~~~g~~~aVLIRA~ep~~g~~~m~~~R~~~~~~~~L~nGPGkL~~AlgI~~~~~g~~l~~~~~l~i~~~~~~~~i  161 (188)
T PRK00802         82 LNVVCGPEGTGAAVLIRALEPLEGIALMRRRRGGKRPEKNLCNGPGKLCKALGITLADNGADLFDASPLYIEDGKEPPEI  161 (188)
T ss_pred             EEEEECCCCCccEEEEEeccccccHHHHHHhcccCCcccccccCHHHHHHHhCCCHHHCCCcccCCCCEEEecCCCCCcE
Confidence            99999999999999999999999999999999544444689999999999999999999999986557999965456689


Q ss_pred             eecceeeecCCCccccCceeeEEECCCCeec
Q 029132          159 LIGPRVGIEYALPEHVNALWRFAIAGTPWIS  189 (198)
Q Consensus       159 ~~t~RIGI~~a~~e~~~~pwRf~i~gnp~VS  189 (198)
                      ++||||||++    |+|+||||||+||||||
T Consensus       162 ~~t~RIGI~~----~~~~pwRf~i~~~~~VS  188 (188)
T PRK00802        162 VAGPRIGISK----ARDLPWRFWIPGSPFVS  188 (188)
T ss_pred             EEeCccccCc----cccCCeEEEECCCcccC
Confidence            9999999994    68999999999999998

>PF02245 Pur_DNA_glyco: Methylpurine-DNA glycosylase (MPG); InterPro: IPR003180 Methylpurine-DNA glycosylase is a base excision-repair protein

Probab=100.00  E-value=1.3e-83  Score=537.34  Aligned_cols=178  Identities=44%  Similarity=0.737  Sum_probs=148.4

Q ss_pred             CcccCCCCHHhHHhhhcCCeEEec----CeeEEEEEeeccC-CCCCccccCCCCCCCcccccCCCCeeEEEEecCceeEE
Q 029132            5 PHHFFQIDALDLAPRLLGKFLRRD----DVLLQITEVEAYR-PNDSACHGRFGITARTAPVFGPGGLAYVYLCYGLHTML   79 (198)
Q Consensus         5 ~~~Ff~~~~~~vA~~LLG~~Lv~~----~~~grIVEtEAY~-~~D~AsHa~~grT~Rn~~mfg~~G~~YVY~~YGmh~cl   79 (198)
                      |++||++|+++||++||||.||++    .++|||||||||. .+|||||||+|+|+||++||++|||+|||++|||||||
T Consensus         1 p~~Ff~r~~~~vA~~LLG~~Lv~~~~~~~~~grIvEtEAY~g~~D~AsHa~~g~T~Rn~~mf~~~G~~YVY~~YGmh~cl   80 (184)
T PF02245_consen    1 PRDFFDRDTVEVARDLLGKVLVRRIPGGELSGRIVETEAYLGPEDPASHAYRGRTPRNEVMFGPPGHAYVYLIYGMHHCL   80 (184)
T ss_dssp             --HHHSSBHHHHHHHCTT-EEEEE-TTS-EEEEEEEEEEE-STT-TTSTTGGG--STTGGGGSSTTBEEEEEETTTEEEE
T ss_pred             CcchhccCHHHHHHHhCCCEEEEEeCCCeEEEEEEEEeeccCCCCCcccccCCCCcccHHHcCCCCEEEEEEecCCeeEE
Confidence            689999999999999999999994    4889999999999 79999999999999999999999999999999999999


Q ss_pred             EEEeCCCCCccEEEeeeccccCCHHHHHHHhcccCCCCcccCChhHHHHHhcCCcccCCCCCCCCCceEE-cCCCCCCce
Q 029132           80 NVVADKEGVGAAVLIRSCAPVSGLKTIQQRRAQLTEKPVLLTGPGKVGQALGISTEWSNHPLYMPGGLEI-LDGPKPEKI  158 (198)
Q Consensus        80 Nvvt~~~g~~~aVLIRA~eP~~G~~~m~~~R~~~~~~~~L~nGPGkL~~AlgI~~~~~g~~l~~~~~l~l-~~~~~~~~I  158 (198)
                      ||||+++|.|+||||||+||++|+|.|++||+.++ ..+|||||||||||||||+++||.||++++.||| .+...+.+|
T Consensus        81 Nivt~~~g~~~aVLIRAieP~~G~~~m~~~R~~~~-~~~L~~GPGkL~~ALgI~~~~~g~~l~~~~~l~i~~~~~~~~~I  159 (184)
T PF02245_consen   81 NIVTGPEGVPEAVLIRAIEPLEGIELMRARRGGKR-DKNLTNGPGKLCQALGIDRELNGLDLCGDPSLWIEGDGVPPEEI  159 (184)
T ss_dssp             EEE-BSTT---EEEEEEEEEEE-HHHHHHHHHHHH-GGGSSSSHHHHHHHTT--GGGTT-BTTT-SSEEEEE-SB-CSGE
T ss_pred             eEEecCCCceEEEEEEeccccCCHHHHHHhcCCCC-ccccccCHHHHHHHhCCCHHHCCcccCCCCceEEccCCCCCCCE
Confidence            99999999999999999999999999999998753 4699999999999999999999999999877999 344457789


Q ss_pred             eecceeeecCCCccccCceeeEEECCCCe
Q 029132          159 LIGPRVGIEYALPEHVNALWRFAIAGTPW  187 (198)
Q Consensus       159 ~~t~RIGI~~a~~e~~~~pwRf~i~gnp~  187 (198)
                      ++||||||+    ||+|+|||||++||||
T Consensus       160 ~~t~RIGI~----~~~~~pwRF~v~gnp~  184 (184)
T PF02245_consen  160 VATPRIGIS----EWADKPWRFYVKGNPF  184 (184)
T ss_dssp             EEEE-STSG----CTTCSCEEEEETT-T-
T ss_pred             EEcCCcccC----ccccCCceeEeCCCCC
Confidence            999999999    6899999999999997

It is responsible for the hydrolysis of the deoxyribose N-glycosidic bond, excising 3-methyladenine and 3-methylguanine from damaged DNA []. Its action is induced by alkylating chemotherapeutics, as well as deaminated and lipid peroxidation-induced purine adducts []. MPG without an N-terminal extension excises hypoxanthine with one-third of the efficiency of full-length MPG under similar conditions, suggesting that is function may largely be attributable to the N-terminal extension [].; GO: 0003677 DNA binding, 0003905 alkylbase DNA N-glycosylase activity, 0006284 base-excision repair; PDB: 1BNK_A 1F6O_A 3QI5_A 3UBY_B 1F4R_A 1EWN_A.

>COG2094 Mpg 3-methyladenine DNA glycosylase [DNA replication, recombination, and repair]

Probab=100.00  E-value=4.8e-81  Score=524.03  Aligned_cols=190  Identities=43%  Similarity=0.675  Sum_probs=179.2

Q ss_pred             CCCCcccCCCCHHhHHhhhcCCeEEec--C--eeEEEEEeeccC-CCCCccccCCCCCCCcccccCCCCeeEEEEecCce
Q 029132            2 TILPHHFFQIDALDLAPRLLGKFLRRD--D--VLLQITEVEAYR-PNDSACHGRFGITARTAPVFGPGGLAYVYLCYGLH   76 (198)
Q Consensus         2 ~~l~~~Ff~~~~~~vA~~LLG~~Lv~~--~--~~grIVEtEAY~-~~D~AsHa~~grT~Rn~~mfg~~G~~YVY~~YGmh   76 (198)
                      +.||++||++|+++||++||||.|+|+  +  ++|+|||||||. ++|+|||||+|+|+||++||++|||+|||++||||
T Consensus         4 ~~~p~~F~~rd~~~vAr~LLG~~lv~~~~g~~~~g~IVEtEAY~G~~D~A~Ha~~GrT~R~~aMf~~~G~~YvY~~~G~h   83 (200)
T COG2094           4 MPLPRSFFARDTLVVARELLGKTLVRRIGGLTTSGRIVETEAYLGPDDPACHAYRGRTKRNRAMFGPPGHAYVYRIYGMH   83 (200)
T ss_pred             ccCCHhhhccCHHHHHHHhcCcEEEEecCCcEEEEEEEEEeEecCCCchhhhhccCcCcccHhhccCCceEEEEEEeccE
Confidence            458999999999999999999999976  3  789999999999 99999999999999999999999999999999999


Q ss_pred             eEEEEEeCCCCCccEEEeeeccccCCHHHHHHHhcccCCCCcccCChhHHHHHhcCCcccCCCCCCCCCc-eEEcCCCCC
Q 029132           77 TMLNVVADKEGVGAAVLIRSCAPVSGLKTIQQRRAQLTEKPVLLTGPGKVGQALGISTEWSNHPLYMPGG-LEILDGPKP  155 (198)
Q Consensus        77 ~clNvvt~~~g~~~aVLIRA~eP~~G~~~m~~~R~~~~~~~~L~nGPGkL~~AlgI~~~~~g~~l~~~~~-l~l~~~~~~  155 (198)
                      |||||||.+||.|+||||||+||++|++.|.+||+.+. .++|||||||||||||||+++||.|+.++++ ||++.++.+
T Consensus        84 ~~lNvv~~~eG~p~aVLIRAieP~eg~~~m~~rR~~~~-~~~l~nGPgkLc~ALgI~~~~~g~~l~~~~~~l~l~~~~~~  162 (200)
T COG2094          84 YCLNVVTGPEGIPAAVLIRAIEPEEGIEPMRQRRGVRV-LRLLTNGPGKLCKALGITREDNGADLINPSEPLWLELGKTP  162 (200)
T ss_pred             EEEEEEecCCCCcceEEEEeeccccccchhhhccCccc-cchhccCchHHHHHhCCCHHHcCCcccCCCCceEEecCCCC
Confidence            99999999999999999999999999999999998764 4689999999999999999999999988775 999988888


Q ss_pred             CceeecceeeecCCCccccCceeeEEECCCCeecCCCCCCC
Q 029132          156 EKILIGPRVGIEYALPEHVNALWRFAIAGTPWISAPKNTLM  196 (198)
Q Consensus       156 ~~I~~t~RIGI~~a~~e~~~~pwRf~i~gnp~VS~~r~~~~  196 (198)
                      ..|.+|+||||+++    +|+|||||++||||||+.+++-.
T Consensus       163 ~~i~~~~RIGI~~~----~~~pwRF~i~g~~~vS~~r~~~~  199 (200)
T COG2094         163 FAISAGARIGISKA----TDKPWRFYITGNPFVSRRRRSQR  199 (200)
T ss_pred             cceeeecccccccc----ccCceEEEecCCceeeecccCCC
Confidence            89999999999987    79999999999999999988743

>cd00540 AAG Alkyladenine DNA glycosylase (AAG), also known as 3-methyladenine DNA glycosylase, catalyzes the first step in base excision repair (BER) by cleaving damaged DNA bases within double-stranded DNA to produce an abasic site

Probab=100.00  E-value=9.8e-81  Score=518.12  Aligned_cols=173  Identities=45%  Similarity=0.700  Sum_probs=162.1

Q ss_pred             cCCCCHHhHHhhhcCCeEEec----CeeEEEEEeeccC-CCCCccccCCCCCCCcccccCCCCeeEEEEecCceeEEEEE
Q 029132            8 FFQIDALDLAPRLLGKFLRRD----DVLLQITEVEAYR-PNDSACHGRFGITARTAPVFGPGGLAYVYLCYGLHTMLNVV   82 (198)
Q Consensus         8 Ff~~~~~~vA~~LLG~~Lv~~----~~~grIVEtEAY~-~~D~AsHa~~grT~Rn~~mfg~~G~~YVY~~YGmh~clNvv   82 (198)
                      ||++|+++||++||||+||++    .++|||||||||. ++|||||||+|||+||.+||++|||+|||+|||||||||||
T Consensus         1 f~~~~~~~vA~~LLGk~Lv~~~~~~~~~grIvEtEAY~G~~D~A~Ha~~gr~~~~~~mfg~~G~~YVY~~YG~h~~lNvV   80 (179)
T cd00540           1 FFNRDTVEVARDLLGKVLVRRLPGGILSGRIVETEAYLGPEDPASHAYRGRTTRRTVMFGPPGHAYVYLIYGMHWCLNVV   80 (179)
T ss_pred             CCCCCHHHHHHHhCCCEEEEECCCCEEEEEEEEEeccCCCCCccccccCCCCccchhhccCCceEEEEeecCCEEEEEEE
Confidence            899999999999999999997    3789999999999 88999999999988888999999999999999999999999


Q ss_pred             eCCCCCccEEEeeeccccCCHHHHHHHhcccCCCCcccCChhHHHHHhcCCcccCCCCCCCCCceEEcCCCC-CCceeec
Q 029132           83 ADKEGVGAAVLIRSCAPVSGLKTIQQRRAQLTEKPVLLTGPGKVGQALGISTEWSNHPLYMPGGLEILDGPK-PEKILIG  161 (198)
Q Consensus        83 t~~~g~~~aVLIRA~eP~~G~~~m~~~R~~~~~~~~L~nGPGkL~~AlgI~~~~~g~~l~~~~~l~l~~~~~-~~~I~~t  161 (198)
                      |+++|.|+||||||+||++|++.|++||+.+.. ++|||||||||||||||+++||.||++++.|||+++.. +.+|++|
T Consensus        81 t~~~g~~~aVLIRAiEp~~G~~~m~~~R~~~~~-~~L~nGPGkL~~AlgI~~~~ng~~l~~~~~l~i~~~~~~~~~i~~~  159 (179)
T cd00540          81 TGPEGEPAAVLIRALEPLEGLELMRERRGGKRK-RDLTNGPGKLCQALGIDKSLNGADLTDSSPLWLEDGGPPPEEIVAT  159 (179)
T ss_pred             ECCCCCccEEEEEeeccccchhhHHhccCCCcc-CeeccChHHHHHHhCCcHHHCCCccCCCCcEEEecCCCCCCCEEEe
Confidence            999999999999999999999999999976543 68999999999999999999999998755799997653 6689999


Q ss_pred             ceeeecCCCccccCceeeEEE
Q 029132          162 PRVGIEYALPEHVNALWRFAI  182 (198)
Q Consensus       162 ~RIGI~~a~~e~~~~pwRf~i  182 (198)
                      |||||++++ ||+|+||||||
T Consensus       160 ~RIGI~~a~-e~~~~pwRf~i  179 (179)
T cd00540         160 PRIGIDYAG-EWADLPWRFYV  179 (179)
T ss_pred             CccccCCCC-ccccCCceeeC
Confidence            999999997 89999999996

AAG bends DNA by intercalating between the base pairs, causing the damaged base to flip out of the double helix and into the enzyme active site for cleavage. Although AAG represents one of six DNA glycosylase classes, it lacks the helix-hairpin-helix active site motif associated with the other BER glycosylases and is structurally quite distinct from them.

>KOG4486 consensus 3-methyladenine DNA glycosylase [Replication, recombination and repair]

Probab=100.00  E-value=1.2e-72  Score=475.90  Aligned_cols=194  Identities=37%  Similarity=0.562  Sum_probs=183.2

Q ss_pred             CCCCCcccCCCCHHhHHhhhcCCeEEecC----eeEEEEEeeccC-CCCCccccCCC-CCCCcccccCCCCeeEEEEecC
Q 029132            1 MTILPHHFFQIDALDLAPRLLGKFLRRDD----VLLQITEVEAYR-PNDSACHGRFG-ITARTAPVFGPGGLAYVYLCYG   74 (198)
Q Consensus         1 m~~l~~~Ff~~~~~~vA~~LLG~~Lv~~~----~~grIVEtEAY~-~~D~AsHa~~g-rT~Rn~~mfg~~G~~YVY~~YG   74 (198)
                      |+.|+.+||+.|++++|+.|||+.|+|+.    +.|||||||||+ ++|+|||+..| +||||+.||++|||+|||+|||
T Consensus        56 m~~mgpEFFqipA~~LArrlLG~~l~RR~~g~~~~gRIvEtEAYlgPeD~AcHsRgGr~TPRn~~mFmk~Gt~YVY~iYG  135 (261)
T KOG4486|consen   56 MMDMGPEFFQIPASQLARRLLGKMLCRRIEGRTTKGRIVETEAYLGPEDKACHSRGGRRTPRNSAMFMKAGTCYVYRIYG  135 (261)
T ss_pred             HhhcChhhhcCchHHHHHHHHHHHHhhhcCCceeeeeEEeeeeecCcchhhhhhcCCccCCCcccccccCceEEEEEeee
Confidence            56789999999999999999999999872    679999999999 99999999998 7999999999999999999999


Q ss_pred             ceeEEEEEeCCCCCccEEEeeeccccCCHHHHHHHhcccCCCCcccCChhHHHHHhcCCcccCCCCCCCCCceEEcCCC-
Q 029132           75 LHTMLNVVADKEGVGAAVLIRSCAPVSGLKTIQQRRAQLTEKPVLLTGPGKVGQALGISTEWSNHPLYMPGGLEILDGP-  153 (198)
Q Consensus        75 mh~clNvvt~~~g~~~aVLIRA~eP~~G~~~m~~~R~~~~~~~~L~nGPGkL~~AlgI~~~~~g~~l~~~~~l~l~~~~-  153 (198)
                      ||+||||++  +|.+++|||||+||++|+|.|+.||+.+.++++|||||+||||||||+++++..+|.++..+|++++. 
T Consensus       136 ~y~c~NIss--~G~GA~VLiRalePl~G~ETmreRrG~~~kdr~L~nGPsKlcQALgi~~e~d~~~La~~e~~wLe~G~e  213 (261)
T KOG4486|consen  136 RYECFNISS--VGAGAGVLVRALEPLCGVETMRERRGGRVKDRDLANGPSKLCQALGITREIDKEWLAGSEKIWLEEGRE  213 (261)
T ss_pred             ehheeeeec--cccceEEeeeccCcccchHHHHHhcCCCcCChhhhcCcHHHHHHhccccccccccccCCCcEeeecCCC
Confidence            999999999  88899999999999999999999999988889999999999999999999999999998899999974 


Q ss_pred             -CCCceeecceeeecCCCccccCceeeEEECCCCeecCCCCCCCC
Q 029132          154 -KPEKILIGPRVGIEYALPEHVNALWRFAIAGTPWISAPKNTLMP  197 (198)
Q Consensus       154 -~~~~I~~t~RIGI~~a~~e~~~~pwRf~i~gnp~VS~~r~~~~~  197 (198)
                       ..+++++++|+||++|+ ||.++|||||+.||||||..++.+.|
T Consensus       214 ~~~p~Vvag~RVGi~~Ag-Ew~~k~lRFyVrd~PWvS~~~r~~~~  257 (261)
T KOG4486|consen  214 VADPEVVAGRRVGIRNAG-EWEEKKLRFYVRDNPWVSCIRRRELG  257 (261)
T ss_pred             CCchhheeccccccchhh-hhhhhceEEEEcCCcceecchhhhcc
Confidence             34579999999999998 89999999999999999999998765

>PF12006 DUF3500: Protein of unknown function (DUF3500); InterPro: IPR021889 This family of proteins is functionally uncharacterised

Probab=80.96  E-value=0.23  Score=45.06  Aligned_cols=95  Identities=14%  Similarity=0.048  Sum_probs=65.5

Q ss_pred             CcccCCCCHHhHHhhhcCCeEEecC--eeEEEEEeeccC-CCCCccccCCCCCCCcccccCCCCe--eEEEEecCceeEE
Q 029132            5 PHHFFQIDALDLAPRLLGKFLRRDD--VLLQITEVEAYR-PNDSACHGRFGITARTAPVFGPGGL--AYVYLCYGLHTML   79 (198)
Q Consensus         5 ~~~Ff~~~~~~vA~~LLG~~Lv~~~--~~grIVEtEAY~-~~D~AsHa~~grT~Rn~~mfg~~G~--~YVY~~YGmh~cl   79 (198)
                      ..+.+..+..++|..||=..|--++  ..-.|.+.|.|+ .-....=..++.-.-+-.+||.|+.  -+-+.++|-|.|+
T Consensus        55 ~l~~lt~~Qr~~a~~lL~~~LS~~Gy~k~~~im~~d~~L~~~~~~~~~~~~~~~Y~~~ifG~Ps~~~~Wg~~f~GHHlsl  134 (313)
T PF12006_consen   55 RLDDLTDEQRKAALALLKAALSPEGYEKARGIMRLDDVLGELEGGSPTIRDPESYYFAIFGTPSTTGPWGWQFEGHHLSL  134 (313)
T ss_pred             chHhCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhhcCCcccCCCCceEEEEecCCCCCCCeeEEecccEEEE
Confidence            3445666667788888877776543  334677888887 3222222223456678899999998  7889999999999


Q ss_pred             EEEeCCCCCccEEEeeeccc
Q 029132           80 NVVADKEGVGAAVLIRSCAP   99 (198)
Q Consensus        80 Nvvt~~~g~~~aVLIRA~eP   99 (198)
                      |++........+=..-|.||
T Consensus       135 n~~~~~~~v~~tP~F~Ga~P  154 (313)
T PF12006_consen  135 NCTFVGGQVSITPTFFGAEP  154 (313)
T ss_pred             EEEEeCCCEEECceeeCCCC
Confidence            99986555544556677777

This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 335 to 438 amino acids in length. This protein has a conserved GHH sequence motif. This protein has two completely conserved G residues that may be functionally important.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	198
3qi5_A	219	Crystal Structure Of Human Alkyladenine Dna Glycosy		3e-15
1bnk_A	216	Human 3-Methyladenine Dna Glycosylase Complexed To		8e-15
1f4r_A	219	Crystal Structure Of The Human Aag Dna Repair Glyco		8e-15
1ewn_A	219	Crystal Structure Of The Human Aag Dna Repair Glyco		2e-14

>pdb|3QI5|A Chain A, Crystal Structure Of Human Alkyladenine Dna Glycosylase In Complex With 3,N4-Ethenocystosine Containing Duplex Dna Length = 219

Iteration: 1
 Score = 78.2 bits (191), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 65/206 (31%), Positives = 97/206 (47%), Gaps = 19/206 (9%)
Query: 1   MTILPHHFFQIDALDLAPRLLGKFLRR-----DDVLLQITEVEAYR-PNDSACHGRFG-I 53
           MT L   FF   A+ LA   LG+ L R      ++  +I E EAY  P D A H R G  
Sbjct: 4   MTRLGLEFFDQPAVPLARAFLGQVLVRRLPNGTELRGRIVETEAYLGPEDEAAHSRGGRQ 63
Query: 54  TARTAPVFGPGGLAYVYLCYGLHTMLNVVADKEGVGAAVLIRSCAPVSGLKTIQQRRAQL 113
           T R   +F   G  YVY+ YG++  +N+ +  +G GA VL+R+  P+ GL+T++Q R+ L
Sbjct: 64  TPRNRGMFMKPGTLYVYIIYGMYFCMNISS--QGDGACVLLRALEPLEGLETMRQLRSTL 121
Query: 114 TEKPV--------LLTGPGKVGQALGISTEWSNHPLYMPGGLEILDGP--KPEKILIGPR 163
            +           L +GP K+ QAL I+  +    L     + +  GP    E  ++   
Sbjct: 122 RKGTASRVLKDRELCSGPSKLCQALAINKSFDQRDLAQDEAVWLERGPLEPSEPAVVAAA 181
Query: 164 VGIEYALPEHVNALWRFAIAGTPWIS 189
                   E      RF + G+PW+S
Sbjct: 182 RVGVGHAGEWARKPLRFYVRGSPWVS 207

>pdb|1BNK|A Chain A, Human 3-Methyladenine Dna Glycosylase Complexed To Dna Length = 216

Iteration: 1
 Score = 76.6 bits (187), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 64/206 (31%), Positives = 97/206 (47%), Gaps = 19/206 (9%)
Query: 1   MTILPHHFFQIDALDLAPRLLGKFLRR-----DDVLLQITEVEAYR-PNDSACHGRFG-I 53
           +T L   FF   A+ LA   LG+ L R      ++  +I E EAY  P D A H R G  
Sbjct: 4   LTRLGLEFFDQPAVPLARAFLGQVLVRRLPNGTELRGRIVETEAYLGPEDEAAHSRGGRQ 63
Query: 54  TARTAPVFGPGGLAYVYLCYGLHTMLNVVADKEGVGAAVLIRSCAPVSGLKTIQQRRAQL 113
           T R   +F   G  YVY+ YG++  +N+ +  +G GA VL+R+  P+ GL+T++  R+QL
Sbjct: 64  TPRNRGMFMKPGTLYVYIIYGMYFCMNISS--QGDGACVLLRALEPLEGLETMRHVRSQL 121
Query: 114 TEKPV--------LLTGPGKVGQALGISTEWSNHPLYMPGGLEILDGP--KPEKILIGPR 163
            +           L +GP K+ QAL I+  +    L     + +  GP    E  ++   
Sbjct: 122 RKGTASRVLKDRELCSGPSKLCQALAINKSFDQRDLAQDEAVWLERGPLEPSEPAVVAAA 181
Query: 164 VGIEYALPEHVNALWRFAIAGTPWIS 189
                   E      RF + G+PW+S
Sbjct: 182 RVGVGHAGEWARKPLRFYVRGSPWVS 207

>pdb|1F4R|A Chain A, Crystal Structure Of The Human Aag Dna Repair Glycosylase Complexed With 1,N6-Ethenoadenine-Dna Length = 219

Iteration: 1
 Score = 76.6 bits (187), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 64/206 (31%), Positives = 97/206 (47%), Gaps = 19/206 (9%)
Query: 1   MTILPHHFFQIDALDLAPRLLGKFLRR-----DDVLLQITEVEAYR-PNDSACHGRFG-I 53
           +T L   FF   A+ LA   LG+ L R      ++  +I E EAY  P D A H R G  
Sbjct: 4   LTRLGLEFFDQPAVPLARAFLGQVLVRRLPNGTELRGRIVETEAYLGPEDEAAHSRGGRQ 63
Query: 54  TARTAPVFGPGGLAYVYLCYGLHTMLNVVADKEGVGAAVLIRSCAPVSGLKTIQQRRAQL 113
           T R   +F   G  YVY+ YG++  +N+ +  +G GA VL+R+  P+ GL+T++Q R+ L
Sbjct: 64  TPRNRGMFMKPGTLYVYIIYGMYFCMNISS--QGDGACVLLRALEPLEGLETMRQLRSTL 121
Query: 114 TEKPV--------LLTGPGKVGQALGISTEWSNHPLYMPGGLEILDGP--KPEKILIGPR 163
            +           L +GP K+ QAL I+  +    L     + +  GP    E  ++   
Sbjct: 122 RKGTASRVLKDRELCSGPSKLCQALAINKSFDQRDLAQDEAVWLERGPLEPSEPAVVAAA 181
Query: 164 VGIEYALPEHVNALWRFAIAGTPWIS 189
                   E      RF + G+PW+S
Sbjct: 182 RVGVGHAGEWARKPLRFYVRGSPWVS 207

>pdb|1EWN|A Chain A, Crystal Structure Of The Human Aag Dna Repair Glycosylase Complexed With 1,N6-Ethenoadenine-Dna Length = 219

Iteration: 1
 Score = 75.5 bits (184), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 63/206 (30%), Positives = 97/206 (47%), Gaps = 19/206 (9%)
Query: 1   MTILPHHFFQIDALDLAPRLLGKFLRR-----DDVLLQITEVEAYR-PNDSACHGRFG-I 53
           +T L   FF   A+ LA   LG+ L R      ++  +I E +AY  P D A H R G  
Sbjct: 4   LTRLGLEFFDQPAVPLARAFLGQVLVRRLPNGTELRGRIVETQAYLGPEDEAAHSRGGRQ 63
Query: 54  TARTAPVFGPGGLAYVYLCYGLHTMLNVVADKEGVGAAVLIRSCAPVSGLKTIQQRRAQL 113
           T R   +F   G  YVY+ YG++  +N+ +  +G GA VL+R+  P+ GL+T++Q R+ L
Sbjct: 64  TPRNRGMFMKPGTLYVYIIYGMYFCMNISS--QGDGACVLLRALEPLEGLETMRQLRSTL 121
Query: 114 TEKPV--------LLTGPGKVGQALGISTEWSNHPLYMPGGLEILDGP--KPEKILIGPR 163
            +           L +GP K+ QAL I+  +    L     + +  GP    E  ++   
Sbjct: 122 RKGTASRVLKDRELCSGPSKLCQALAINKSFDQRDLAQDEAVWLERGPLEPSEPAVVAAA 181
Query: 164 VGIEYALPEHVNALWRFAIAGTPWIS 189
                   E      RF + G+PW+S
Sbjct: 182 RVGVGHAGEWARKPLRFYVRGSPWVS 207

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	198
3uby_A	219	DNA-3-methyladenine glycosylase; alkyladenine DNA	7e-53

>3uby_A DNA-3-methyladenine glycosylase; alkyladenine DNA glycosylase fold, AAG, DNA repair, DNA BIND nucleus, hydrolase-DNA complex; HET: DNA EDC; 2.00A {Homo sapiens} PDB: 3qi5_A* 1f4r_A* 1f6o_A* 1ewn_A* 1bnk_A* Length = 219

 Score =  167 bits (425), Expect = 7e-53
 Identities = 67/210 (31%), Positives = 102/210 (48%), Gaps = 21/210 (10%)

Query: 1   MTILPHHFFQIDALDLAPRLLGKFLRR-----DDVLLQITEVEAYR-PNDSACHGRFG-I 53
           MT L   FF   A+ LA   LG+ L R      ++  +I E EAY  P D A H R G  
Sbjct: 4   MTRLGLEFFDQPAVPLARAFLGQVLVRRLPNGTELRGRIVETEAYLGPEDEAAHSRGGRQ 63

Query: 54  TARTAPVFGPGGLAYVYLCYGLHTMLNVVADKEGVGAAVLIRSCAPVSGLKTIQQRR--- 110
           T R   +F   G  YVY+ YG++  +N+    +G GA VL+R+  P+ GL+T++Q R   
Sbjct: 64  TPRNRGMFMKPGTLYVYIIYGMYFCMNIS--SQGDGACVLLRALEPLEGLETMRQLRSTL 121

Query: 111 -----AQLTEKPVLLTGPGKVGQALGISTEWSNHPLYMPGGLEILDG---PKPEKILIGP 162
                +++ +   L +GP K+ QAL I+  +    L     + +  G   P    ++   
Sbjct: 122 RKGTASRVLKDRELCSGPSKLCQALAINKSFDQRDLAQDEAVWLERGPLEPSEPAVVAAA 181

Query: 163 RVGIEYALPEHVNALWRFAIAGTPWISAPK 192
           RVG+ +A  E      RF + G+PW+S   
Sbjct: 182 RVGVGHA-GEWARKPLRFYVRGSPWVSVVD 210

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	198
3uby_A	219	DNA-3-methyladenine glycosylase; alkyladenine DNA	100.0

>3uby_A DNA-3-methyladenine glycosylase; alkyladenine DNA glycosylase fold, AAG, DNA repair, DNA BIND nucleus, hydrolase-DNA complex; HET: DNA EDC; 2.00A {Homo sapiens} SCOP: b.46.1.2 PDB: 3qi5_A* 1f4r_A* 1f6o_A* 1ewn_A* 1bnk_A*

Probab=100.00  E-value=2.2e-86  Score=565.43  Aligned_cols=191  Identities=35%  Similarity=0.539  Sum_probs=172.4

Q ss_pred             CCCCcccCCCCHHhHHhhhcCCeEEec---C--eeEEEEEeeccC-CCCCccccCCC-CCCCcccccCCCCeeEEEEecC
Q 029132            2 TILPHHFFQIDALDLAPRLLGKFLRRD---D--VLLQITEVEAYR-PNDSACHGRFG-ITARTAPVFGPGGLAYVYLCYG   74 (198)
Q Consensus         2 ~~l~~~Ff~~~~~~vA~~LLG~~Lv~~---~--~~grIVEtEAY~-~~D~AsHa~~g-rT~Rn~~mfg~~G~~YVY~~YG   74 (198)
                      ++|+++||++|+++||++||||+||++   +  ++|||||||||+ ++|||||||+| +|+||++||++|||+|||+|||
T Consensus         5 ~~L~~~Ff~r~~~~vA~~LLG~~Lv~~~~~g~~~~grIVEtEAY~G~~D~AsHa~~GrrT~Rn~~MFg~pG~~YVY~~YG   84 (219)
T 3uby_A            5 TRLGLEFFDQPAVPLARAFLGQVLVRRLPNGTELRGRIVETEAYLGPEDEAAHSRGGRQTPRNRGMFMKPGTLYVYIIYG   84 (219)
T ss_dssp             CBCCHHHHCSCHHHHHHHTTTCEEEEECTTSCEEEEEEEEEEEECSTTCTTSTTGGGCCCSGGGGGGSSTTBEEEEEETT
T ss_pred             ccCCHHHHCCCHHHHHHHhCCCEEEEEcCCCCEEEEEEEEEeeccCCCCccccccCCCCCcccHHhcCCCcEEEEEEecC
Confidence            579999999999999999999999995   3  689999999999 89999999998 6999999999999999999999


Q ss_pred             ceeEEEEEeCCCCCccEEEeeeccccCCHHHHHHHhccc--------CCCCcccCChhHHHHHhcCCcccCCCCCCCCCc
Q 029132           75 LHTMLNVVADKEGVGAAVLIRSCAPVSGLKTIQQRRAQL--------TEKPVLLTGPGKVGQALGISTEWSNHPLYMPGG  146 (198)
Q Consensus        75 mh~clNvvt~~~g~~~aVLIRA~eP~~G~~~m~~~R~~~--------~~~~~L~nGPGkL~~AlgI~~~~~g~~l~~~~~  146 (198)
                      |||||||||+.  .++||||||+||++|+|.|++||+.+        ....+|||||||||||||||+++||.||++++.
T Consensus        85 mh~clNvv~~~--~g~aVLIRA~EP~~G~e~m~~rR~~~~~~~~~~~~~~~~L~~GPGkL~~ALgI~~~~ng~dL~~~~~  162 (219)
T 3uby_A           85 MYFCMNISSQG--DGACVLLRALEPLEGLETMRQLRSTLRKGTASRVLKDRELCSGPSKLCQALAINKSFDQRDLAQDEA  162 (219)
T ss_dssp             TEEEEEEECSS--TTCEEEEEEEEEEECHHHHHHHHHHC--------CCGGGTSSSHHHHHHHTTCCGGGTTCBTTTCSS
T ss_pred             cEEEEEEEecC--CCCEEEEeccccCccHHHHHHhcccccccccccccccchhcCCHHHHHHHhCCCHHHCCCccCCCCc
Confidence            99999999965  55899999999999999999999632        124689999999999999999999999997667


Q ss_pred             eEEcCCCC---CCceeecceeeecCCCccccCceeeEEECCCCeecCCCCCC
Q 029132          147 LEILDGPK---PEKILIGPRVGIEYALPEHVNALWRFAIAGTPWISAPKNTL  195 (198)
Q Consensus       147 l~l~~~~~---~~~I~~t~RIGI~~a~~e~~~~pwRf~i~gnp~VS~~r~~~  195 (198)
                      |||+++..   +.+|++||||||++++ ||+|+||||||+||||||++|+..
T Consensus       163 l~l~~~~~~~~~~~I~~~pRIGI~~ag-e~~~~PwRF~i~g~p~VS~~r~~~  213 (219)
T 3uby_A          163 VWLERGPLEPSEPAVVAAARVGVGHAG-EWARKPLRFYVRGSPWVSVVDRVA  213 (219)
T ss_dssp             EEEECCSCCBCGGGEEEECCSCC--CT-TTTTSCCEEEETTCTTCSCCCTTT
T ss_pred             eEEecCCCCCCCCCEEEeCcccCCCCc-ccccCCceeEeCCCCeECCCcccc
Confidence            99998642   3479999999999996 799999999999999999998764

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	198
d1ewna_	214	b.46.1.2 (A:) 3-methyladenine DNA glycosylase (AAG	9e-59

>d1ewna_ b.46.1.2 (A:) 3-methyladenine DNA glycosylase (AAG, ANPG, MPG) {Human (Homo sapiens) [TaxId: 9606]} Length = 214

class: All beta proteins
fold: FMT C-terminal domain-like
superfamily: FMT C-terminal domain-like
family: 3-methyladenine DNA glycosylase (AAG, ANPG, MPG)
domain: 3-methyladenine DNA glycosylase (AAG, ANPG, MPG)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  181 bits (461), Expect = 9e-59
 Identities = 66/210 (31%), Positives = 100/210 (47%), Gaps = 21/210 (10%)

Query: 1   MTILPHHFFQIDALDLAPRLLGKFLRRDD-----VLLQITEVEAYR-PNDSACHGRFG-I 53
           +T L   FF   A+ LA   LG+ L R       +  +I E +AY  P D A H R G  
Sbjct: 2   LTRLGLEFFDQPAVPLARAFLGQVLVRRLPNGTELRGRIVETQAYLGPEDEAAHSRGGRQ 61

Query: 54  TARTAPVFGPGGLAYVYLCYGLHTMLNVVADKEGVGAAVLIRSCAPVSGLKTIQQRRAQL 113
           T R   +F   G  YVY+ YG++  +N+    +G GA VL+R+  P+ GL+T++Q R+ L
Sbjct: 62  TPRNRGMFMKPGTLYVYIIYGMYFCMNIS--SQGDGACVLLRALEPLEGLETMRQLRSTL 119

Query: 114 TEKPV--------LLTGPGKVGQALGISTEWSNHPLYMPGGLEILDGP---KPEKILIGP 162
            +           L +GP K+ QAL I+  +    L     + +  GP       ++   
Sbjct: 120 RKGTASRVLKDRELCSGPSKLCQALAINKSFDQRDLAQDEAVWLERGPLEPSEPAVVAAA 179

Query: 163 RVGIEYALPEHVNALWRFAIAGTPWISAPK 192
           RVG+ +A  E      RF + G+PW+S   
Sbjct: 180 RVGVGHA-GEWARKPLRFYVRGSPWVSVVD 208

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	198
d1ewna_	214	3-methyladenine DNA glycosylase (AAG, ANPG, MPG) {	100.0

>d1ewna_ b.46.1.2 (A:) 3-methyladenine DNA glycosylase (AAG, ANPG, MPG) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: FMT C-terminal domain-like
superfamily: FMT C-terminal domain-like
family: 3-methyladenine DNA glycosylase (AAG, ANPG, MPG)
domain: 3-methyladenine DNA glycosylase (AAG, ANPG, MPG)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.9e-86  Score=558.95  Aligned_cols=191  Identities=35%  Similarity=0.559  Sum_probs=173.9

Q ss_pred             CCCCCcccCCCCHHhHHhhhcCCeEEec---C--eeEEEEEeeccC-CCCCccccCCC-CCCCcccccCCCCeeEEEEec
Q 029132            1 MTILPHHFFQIDALDLAPRLLGKFLRRD---D--VLLQITEVEAYR-PNDSACHGRFG-ITARTAPVFGPGGLAYVYLCY   73 (198)
Q Consensus         1 m~~l~~~Ff~~~~~~vA~~LLG~~Lv~~---~--~~grIVEtEAY~-~~D~AsHa~~g-rT~Rn~~mfg~~G~~YVY~~Y   73 (198)
                      |++|+++||++|+++||++||||+|||+   +  ++|+|||||||+ ++|||||||+| +|+||++||++|||+|||++|
T Consensus         2 m~~L~~~Ff~r~~~~vA~~LLG~~Lv~~~~~g~~~~g~IvEtEAY~G~~D~A~Ha~~gr~T~Rn~~Mf~~~G~~YVY~~Y   81 (214)
T d1ewna_           2 LTRLGLEFFDQPAVPLARAFLGQVLVRRLPNGTELRGRIVETQAYLGPEDEAAHSRGGRQTPRNRGMFMKPGTLYVYIIY   81 (214)
T ss_dssp             TTBCCHHHHCSBHHHHHHHHTTCEEEEECTTSCEEEEEEEEEEEECSTTCTTSTTGGGCCCSSSGGGGSSTTBEEEEEET
T ss_pred             CccCCHHHhCCCHHHHHHHhCCCEEEEEcCCCCEEEEEEEEEeccCCCCCchhhccCCCCCchhHHhcCCCceEEEEEec
Confidence            7899999999999999999999999985   2  689999999999 89999999998 599999999999999999999


Q ss_pred             CceeEEEEEeCCCCCccEEEeeeccccCCHHHHHHHhcccC--------CCCcccCChhHHHHHhcCCcccCCCCCCCCC
Q 029132           74 GLHTMLNVVADKEGVGAAVLIRSCAPVSGLKTIQQRRAQLT--------EKPVLLTGPGKVGQALGISTEWSNHPLYMPG  145 (198)
Q Consensus        74 Gmh~clNvvt~~~g~~~aVLIRA~eP~~G~~~m~~~R~~~~--------~~~~L~nGPGkL~~AlgI~~~~~g~~l~~~~  145 (198)
                      ||||||||||  +|+|+||||||+||++|++.|+++|+.+.        +..+|||||||||||||||+++||.+|++++
T Consensus        82 G~h~~lNiv~--~g~~~aVLIRa~eP~~G~~~m~~~R~~~~~~~~~~~~~~~~L~~GPGkL~~ALgI~~~~~g~~l~~~~  159 (214)
T d1ewna_          82 GMYFCMNISS--QGDGACVLLRALEPLEGLETMRQLRSTLRKGTASRVLKDRELCSGPSKLCQALAINKSFDQRDLAQDE  159 (214)
T ss_dssp             TTEEEEEEEC--BSTTCEEEEEEEEEEECHHHHHHHTTC--------CCCGGGTSSSHHHHHHHTTCCGGGTTCBTTSCS
T ss_pred             CceEEEEEEe--cCCCceeEEeeccccccHHHHHHhhccccccccccccccccccCChHHHHHHhCCcHhhCCCccCCCC
Confidence            9999999998  47899999999999999999999997642        2357999999999999999999999999877


Q ss_pred             ceEEcCCCC---CCceeecceeeecCCCccccCceeeEEECCCCeecCCCCC
Q 029132          146 GLEILDGPK---PEKILIGPRVGIEYALPEHVNALWRFAIAGTPWISAPKNT  194 (198)
Q Consensus       146 ~l~l~~~~~---~~~I~~t~RIGI~~a~~e~~~~pwRf~i~gnp~VS~~r~~  194 (198)
                      .+|++++..   +.+|++||||||++++ ||+++|||||++||||||+++|.
T Consensus       160 ~l~i~~~~~~~~~~~I~~tpRIGI~~a~-e~~~~pwRF~i~~np~VS~~~r~  210 (214)
T d1ewna_         160 AVWLERGPLEPSEPAVVAAARVGVGHAG-EWARKPLRFYVRGSPWVSVVDRV  210 (214)
T ss_dssp             SEEEECCC------CEEEECCTTCCSCS-HHHHSCCEEEETTCTTCSSCCHH
T ss_pred             ceEEeCCCCCCCCCCEEEcCCCcccCcc-ccccCCceEEeCCCceEcCCccc
Confidence            899997642   3469999999999996 79999999999999999999864