Citrus Sinensis ID: 029283

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190------
Protein Sequence
MAGEDRTLVEILEENNPVDMTKYMTYVSAPQAGAIATFSGTTRDTFDGKIVVELRYESYVSMAIRCIKSICSLARSSWNLHSIAVAHRLGPVPVGETSVFIAVSAVHRADALDACKFLIDELKASVPIWKKEVYSNGEVWKENSEFMERRLDLGKKDGICCGSGREVPVKSHARKTCCGAKVKVDDEGLANINSSK
Secondary Structure (PSIPRED)
cccccccEEEEEEEEccccHHHHHHHHccccccEEEEEEEEEEcccccccEEEEEEcccHHHHHHHHHHHHHHHHHHccccEEEEEEEEcccccccEEEEEEEccccHHHHHHHHHHHHHHHcccccccccEEEccccccccccHHHHHHHHcccccccccccccccccccccccccccccEEEcccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccEEEEEEcccccHHHHHHHcccccccEEEEEEEEccccccccccccEEEEEcccHHHHHHHHHHHHHHHHccEEEEEEEEEcEEEccccEEEEEEEEEccHHHHHHHHHHHHHHHHHHccEEEcccccccccHccccHcHHHHHHHHHHccccccccEEEEEEEcccccccccEEEEcccccEEEcccc
Coil and Loop (DISEMBL)
MAGEDRTLVEILEennpvdmtkymtyvsapqagaiatfsgttrdtfdgKIVVELRYESYVSMAIRCIKSICSLARSSWNLHSIAVAhrlgpvpvgetSVFIAVSAVHRADALDACKFLIDELKasvpiwkkevysngevwKENSEFMERRLDlgkkdgiccgsgrevpvksharktccgakvkvddeglaninssk
Flexible Loop (DISEMBL)
MAGEDRTLVEILEENNPVDMTKYMTYVSAPQAGAiatfsgttrdtfDGKIVVELRYESYVSMAIRCIKSICSLARSSWNLHSIAVAHRLGPVPVGETSVFIAVSAVHRADALDACKFLIDELkasvpiwkkevysngevwkensEFMERRLDLGKKDGICCGsgrevpvksharktccgakvkvddeglaninssk
Low Complexity Region (SEG)
MAGEDRTLVEILEENNPVDMTKYMTYVSAPQAGAIATFSGTTRDTFDGKIVVELRYESYVSMAIRCIKSICSLARSSWNLHSIAVAHRLGPVPVGETSVFIAVSAVHRADALDACKFLIDELKASVPIWKKEVYSNGEVWKENSEFMERRLDLGKKDGICCGSGREVPVKSHARKTCCGAKVKVDDEGLANINSSK
Disordered region (IsUnstruct)
**********ILEENNPVDMTKYMTYVSAPQAGAIATFSGTTRDTFDGKIVVELRYESYVSMAIRCIKSICSLARSSWNLHSIAVAHRLGPVPVGETSVFIAVSAVHRADALDACKFLIDELKASVPIWKKEVYSNGEVWKENSEFMERRLDLGKKDGICCGSGREVPVKSHARKTCCGAKVKV************
Disordered Region (DISOPRED)
******T***ILEENNPVDMTKYMTYVSAPQAGAIATFSGTTRDTFDGKIVVELRYESYVSMAIRCIKSICSLARSSWNLHSIAVAHRLGPVPVGETSVFIAVSAVHRADALDACKFLIDELKASVPIWKKEVYSNGEVWKENSEFM*************************************************
Disordered Region (DISEMBL)
MAGEDRTLVEILEENNPVDMTKYMTYVSAPQAGAIATFSGTTRDTFDGKIVVELRYESYVSMAIRCIKSICSLARSSWNLHSIAVAHRLGPVPVGETSVFIAVSAVHRADALDACKFLIDELKASVPIWKKEVYSNGEVWKENSEFMERRLDLGKKDGICCGSGREVPVKSHARKTCCGAKVKVDDEGLANINSSK
Disordered Region (DISPRO)
*****RTLVEILEENNPVDMTKYMTYVSAPQAGAIATFSGTTRDTFDGKIVVELRYESYVSMAIRCIKSICSLARSSWNLHSIAVAHRLGPVPVGETSVFIAVSAVHRADALDACKFLIDELKASVPIWKKEVYSNGEVWKENSEFMERRLDLGKKDGICCGSGREVPVKSHARKTCCGAKVKVDDEGLANIN***
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAGEDRTLVEILEENNPVDMTKYMTYVSAPQAGAIATFSGTTRDTFDGKIVVELRYESYVSMAIRCIKSICSLARSSWNLHSIAVAHRLGPVPVGETSVFIAVSAVHRADALDACKFLIDELKASVPIWKKEVYSNGEVWKENSEFMERRLDLGKKDGICCGSGREVPVKSHARKTCCGAKVKVDDEGLANINSSK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	196	2.2.26 [Sep-21-2011]
O22827	198	Molybdopterin synthase ca	yes	no	0.933	0.924	0.691	1e-74
Q6Z2X3	193	Molybdopterin synthase ca	yes	no	0.913	0.927	0.545	3e-49
A2X0R4	193	Molybdopterin synthase ca	N/A	no	0.913	0.927	0.540	5e-49
B4NJW0	372	Molybdopterin synthase ca	N/A	no	0.668	0.352	0.492	3e-31
Q297G3	361	Molybdopterin synthase ca	yes	no	0.739	0.401	0.472	5e-31
B4GE20	361	Molybdopterin synthase ca	N/A	no	0.739	0.401	0.472	8e-31
B4JHP4	362	Molybdopterin synthase ca	N/A	no	0.668	0.361	0.492	3e-30
Q9VBX2	367	Molybdopterin synthase ca	yes	no	0.668	0.356	0.492	4e-30
O96007	188	Molybdopterin synthase ca	yes	no	0.607	0.632	0.529	4e-30
Q171H3	155	Molybdopterin synthase ca	N/A	no	0.607	0.767	0.536	6e-30

>sp|O22827|MOC2B_ARATH Molybdopterin synthase catalytic subunit OS=Arabidopsis thaliana GN=MOCS2 PE=2 SV=1

 Score =  278 bits (712), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 130/188 (69%), Positives = 160/188 (85%), Gaps = 5/188 (2%)

Query: 1   MAGEDRTLVEILEENNPVDMTKYMTYVSAPQAGAIATFSGTTRDTFDGKIVVELRYESYV 60
           M+ E++ L+EILEE + VD+ KY+ YVSAPQAGAIATFSGTTRD F+GK V+ELRYE+YV
Sbjct: 1   MSAEEKNLIEILEEGHKVDVVKYIDYVSAPQAGAIATFSGTTRDMFEGKTVLELRYEAYV 60

Query: 61  SMAIRCIKSICSLARSSWNLHSIAVAHRLGPVPVGETSVFIAVSAVHRADALDACKFLID 120
            MA RC+ SIC+ ARS+W++H IAVAHRLGPVPVGETSV IAVS+VHRAD LDACKFLID
Sbjct: 61  PMATRCLSSICTTARSTWDIHKIAVAHRLGPVPVGETSVLIAVSSVHRADGLDACKFLID 120

Query: 121 ELKASVPIWKKEVYSNGEVWKENSEFMERRLDLG-KKDGICCGSGREVPVKSHARKTCCG 179
           ELKASVPIWKKEVY+NGE+WKENSEFME+RL+L  K+D I     ++  V+ H R+ CCG
Sbjct: 121 ELKASVPIWKKEVYTNGEIWKENSEFMEKRLELAEKRDSIV----KKTVVEEHRRRGCCG 176

Query: 180 AKVKVDDE 187
           +KV+V+++
Sbjct: 177 SKVRVEED 184

Catalytic subunit of the molybdopterin synthase complex, a complex that catalyzes the conversion of precursor Z into molybdopterin. Acts by mediating the incorporation of 2 sulfur atoms from thiocarboxylated MOCS2A into precursor Z to generate a dithiolene group.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 8EC: .EC: 1EC: .EC: 1EC: 2

>sp|Q6Z2X3|MOC2B_ORYSJ Molybdopterin synthase catalytic subunit OS=Oryza sativa subsp. japonica GN=MOCS2 PE=2 SV=1

 Score =  194 bits (494), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 102/187 (54%), Positives = 133/187 (71%), Gaps = 8/187 (4%)

Query: 2   AGEDRTLVEILEENNP-VDMTKYMTYVSAPQAGAIATFSGTTRDTFDGKIVVELRYESYV 60
           A E+  LVEIL+E +  +D+ +Y+ +V    AGAIATF GTTRD+F+G+ VVELRYE+Y 
Sbjct: 12  ATEEEDLVEILDEGSGRLDIARYVDHVRDLAAGAIATFEGTTRDSFEGRRVVELRYEAYG 71

Query: 61  SMAIRCIKSICSLARSSWNLHSIAVAHRLGPVPVGETSVFIAVSAVHRADALDACKFLID 120
           +MA R + +I   AR++ +L  +AVAHRLG VP GE SVF+A SAVHRADA++AC+++ID
Sbjct: 72  AMARRRLAAILREARAAHSLRRLAVAHRLGTVPAGEASVFVAASAVHRADAMEACRYVID 131

Query: 121 ELKASVPIWKKEVYSNGEVWKENSEFMERRLDLGKKDGICCGSGREVPVKSHAR-KTCCG 179
           E+KASVPIWKKEVY +GEVWKEN EF    LD    DG    S    P    A+   CCG
Sbjct: 132 EVKASVPIWKKEVYDDGEVWKENREF----LDRTTTDGTTASS--PAPATRPAKGGGCCG 185

Query: 180 AKVKVDD 186
            KV+V++
Sbjct: 186 RKVRVNE 192

Catalytic subunit of the molybdopterin synthase complex, a complex that catalyzes the conversion of precursor Z into molybdopterin. Acts by mediating the incorporation of 2 sulfur atoms from thiocarboxylated MOCS2A into precursor Z to generate a dithiolene group.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 2

EC: .

EC: 8

EC: .

EC: 1

EC: .

EC: 1

EC: 2

>sp|A2X0R4|MOC2B_ORYSI Molybdopterin synthase catalytic subunit OS=Oryza sativa subsp. indica GN=MOCS2 PE=3 SV=1

 Score =  194 bits (492), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 101/187 (54%), Positives = 133/187 (71%), Gaps = 8/187 (4%)

Query: 2   AGEDRTLVEILEENNP-VDMTKYMTYVSAPQAGAIATFSGTTRDTFDGKIVVELRYESYV 60
           A E+  LVEIL+E +  +D+ +Y+ +V    AGAIATF GTTRD+F+G+ VVELRYE+Y 
Sbjct: 12  ATEEEDLVEILDEGSGRLDIARYVDHVRDLAAGAIATFEGTTRDSFEGRRVVELRYEAYG 71

Query: 61  SMAIRCIKSICSLARSSWNLHSIAVAHRLGPVPVGETSVFIAVSAVHRADALDACKFLID 120
           +MA R + +I   AR++ +L  +AVAHRLG VP GE SVF+A SAVHRADA++AC+++ID
Sbjct: 72  AMARRRLAAILREARAAHSLRRLAVAHRLGTVPAGEASVFVAASAVHRADAMEACRYVID 131

Query: 121 ELKASVPIWKKEVYSNGEVWKENSEFMERRLDLGKKDGICCGSGREVPVKSHAR-KTCCG 179
           E+KASVPIWKKEVY +GEVWKEN EF    LD    DG    S    P    A+   CCG
Sbjct: 132 EVKASVPIWKKEVYDDGEVWKENREF----LDRTTTDGTTASS--PAPATRPAKGGGCCG 185

Query: 180 AKVKVDD 186
           +KV+ ++
Sbjct: 186 SKVRANE 192

Catalytic subunit of the molybdopterin synthase complex, a complex that catalyzes the conversion of precursor Z into molybdopterin. Acts by mediating the incorporation of 2 sulfur atoms from thiocarboxylated MOCS2A into precursor Z to generate a dithiolene group.

Oryza sativa subsp. indica (taxid: 39946)

EC: 2

EC: .

EC: 8

EC: .

EC: 1

EC: .

EC: 1

EC: 2

>sp|B4NJW0|MOC2B_DROWI Molybdopterin synthase catalytic subunit OS=Drosophila willistoni GN=GK13883 PE=3 SV=1

 Score =  135 bits (339), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 66/134 (49%), Positives = 88/134 (65%), Gaps = 3/134 (2%)

Query: 17  PVDMTKYMTYVSAPQAGAIATFSGTTRDTFDGKIVVELRYESYVSMAIRCIKSICSLARS 76
           P+D+T   T +  P  GA + F GTTRD+F+GK V+ L YE+Y  MAI+ +K+IC+  R+
Sbjct: 10  PLDITTLYTLLGDPGCGASSVFVGTTRDSFEGKKVLSLEYEAYEPMAIKEMKTICTDLRA 69

Query: 77  SW-NLHSIAVAHRLGPVPVGETSVFIAVSAVHRADALDACKFLIDELKASVPIWKKEVYS 135
            W +L  I + HRLG VPVGE SV IA SA HR  AL++    +D+LK  VPIWKKE+Y 
Sbjct: 70  KWPDLKHIVIYHRLGSVPVGEASVVIATSAPHRLSALESVSLAVDQLKTRVPIWKKELYE 129

Query: 136 NGE--VWKENSEFM 147
             +   WKEN E +
Sbjct: 130 GDDPAQWKENKESL 143

Catalytic subunit of the molybdopterin synthase complex, a complex that catalyzes the conversion of precursor Z into molybdopterin. Acts by mediating the incorporation of 2 sulfur atoms from thiocarboxylated MOCS2A into precursor Z to generate a dithiolene group.

Drosophila willistoni (taxid: 7260)

EC: 2

EC: .

EC: 8

EC: .

EC: 1

EC: .

EC: 1

EC: 2

>sp|Q297G3|MOC2B_DROPS Molybdopterin synthase catalytic subunit OS=Drosophila pseudoobscura pseudoobscura GN=GA10181 PE=3 SV=2

 Score =  134 bits (336), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 70/148 (47%), Positives = 94/148 (63%), Gaps = 3/148 (2%)

Query: 17  PVDMTKYMTYVSAPQAGAIATFSGTTRDTFDGKIVVELRYESYVSMAIRCIKSICSLARS 76
           P+D+T  +  +S P  GA + F GTTRD+F GK VV L YE+Y +MA++ +  ICS  R+
Sbjct: 10  PIDVTYAINLISDPSCGASSIFIGTTRDSFQGKKVVSLAYEAYENMALKEMDKICSDLRA 69

Query: 77  SW-NLHSIAVAHRLGPVPVGETSVFIAVSAVHRADALDACKFLIDELKASVPIWKKEVY- 134
           +W +L  I + HRLG VP  E SV IA SA HR+ AL A  F ID+LK+ VPIWKKE+Y 
Sbjct: 70  TWPDLKHILIYHRLGTVPENEASVVIAASAPHRSAALKAVTFAIDQLKSRVPIWKKEIYE 129

Query: 135 -SNGEVWKENSEFMERRLDLGKKDGICC 161
            ++   WKENSE +  +  L   +   C
Sbjct: 130 GNHDAEWKENSESIRPKKSLSSFNYSVC 157

Catalytic subunit of the molybdopterin synthase complex, a complex that catalyzes the conversion of precursor Z into molybdopterin. Acts by mediating the incorporation of 2 sulfur atoms from thiocarboxylated MOCS2A into precursor Z to generate a dithiolene group.

Drosophila pseudoobscura pseudoobscura (taxid: 46245)

EC: 2

EC: .

EC: 8

EC: .

EC: 1

EC: .

EC: 1

EC: 2

>sp|B4GE20|MOC2B_DROPE Molybdopterin synthase catalytic subunit OS=Drosophila persimilis GN=GL21938 PE=3 SV=1

 Score =  133 bits (334), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 70/148 (47%), Positives = 94/148 (63%), Gaps = 3/148 (2%)

Query: 17  PVDMTKYMTYVSAPQAGAIATFSGTTRDTFDGKIVVELRYESYVSMAIRCIKSICSLARS 76
           P+D+T  +  +S P  GA + F GTTRD+F GK VV L YE+Y +MA++ +  ICS  R+
Sbjct: 10  PIDVTYAINLISDPSCGASSIFIGTTRDSFQGKKVVSLAYEAYENMALKEMDKICSDLRA 69

Query: 77  SW-NLHSIAVAHRLGPVPVGETSVFIAVSAVHRADALDACKFLIDELKASVPIWKKEVY- 134
           +W +L  I + HRLG VP  E SV IA SA HR+ AL A  F ID+LK+ VPIWKKE+Y 
Sbjct: 70  TWPDLKHILIYHRLGTVPENEASVVIAASAPHRSAALKAVTFAIDQLKSRVPIWKKELYE 129

Query: 135 -SNGEVWKENSEFMERRLDLGKKDGICC 161
            ++   WKENSE +  +  L   +   C
Sbjct: 130 GNHDAEWKENSESIRPKKSLSSFNYSVC 157

Catalytic subunit of the molybdopterin synthase complex, a complex that catalyzes the conversion of precursor Z into molybdopterin. Acts by mediating the incorporation of 2 sulfur atoms from thiocarboxylated MOCS2A into precursor Z to generate a dithiolene group.

Drosophila persimilis (taxid: 7234)

EC: 2

EC: .

EC: 8

EC: .

EC: 1

EC: .

EC: 1

EC: 2

>sp|B4JHP4|MOC2B_DROGR Molybdopterin synthase catalytic subunit OS=Drosophila grimshawi GN=GH19575 PE=3 SV=1

 Score =  131 bits (329), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 66/134 (49%), Positives = 86/134 (64%), Gaps = 3/134 (2%)

Query: 15  NNPVDMTKYMTYVSAPQAGAIATFSGTTRDTFDGKIVVELRYESYVSMAIRCIKSICSLA 74
           N+ +D+      +     GA + F GTTRD FDGK V+ L YESY  MA++ +  ICS  
Sbjct: 8   NSQIDINHIHNLLIDESCGASSVFVGTTRDNFDGKKVISLEYESYEKMALKEMSKICSQL 67

Query: 75  RSSW-NLHSIAVAHRLGPVPVGETSVFIAVSAVHRADALDACKFLIDELKASVPIWKKEV 133
           R+ W +L  IA+ HRLG VPV E SV IA SA HRA AL++  F +++LK+ VPIWKKE+
Sbjct: 68  RARWPDLKHIAIYHRLGTVPVKEASVVIATSAPHRAAALESVTFAVEQLKSRVPIWKKEI 127

Query: 134 YSNGEV--WKENSE 145
           Y N  +  WKEN E
Sbjct: 128 YENDTIGEWKENME 141

Catalytic subunit of the molybdopterin synthase complex, a complex that catalyzes the conversion of precursor Z into molybdopterin. Acts by mediating the incorporation of 2 sulfur atoms from thiocarboxylated MOCS2A into precursor Z to generate a dithiolene group.

Drosophila grimshawi (taxid: 7222)

EC: 2

EC: .

EC: 8

EC: .

EC: 1

EC: .

EC: 1

EC: 2

>sp|Q9VBX2|MOC2B_DROME Molybdopterin synthase catalytic subunit OS=Drosophila melanogaster GN=Mocs2 PE=2 SV=2

 Score =  131 bits (329), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 66/134 (49%), Positives = 86/134 (64%), Gaps = 3/134 (2%)

Query: 15  NNPVDMTKYMTYVSAPQAGAIATFSGTTRDTFDGKIVVELRYESYVSMAIRCIKSICSLA 74
           N+P+D+      ++    GA + F GTTRD F GK V+ L YE+Y SMA++ +  ICS  
Sbjct: 8   NDPIDIAHIHQLLADEGCGASSVFVGTTRDNFQGKKVLSLAYEAYDSMALKEMNKICSDL 67

Query: 75  RSSW-NLHSIAVAHRLGPVPVGETSVFIAVSAVHRADALDACKFLIDELKASVPIWKKEV 133
           RS W +L  I + HRLG VPV E SV IA S+ HR++AL++  F ID+LK  VPIWKKE+
Sbjct: 68  RSKWLDLKHIVIYHRLGTVPVCEASVVIAASSPHRSEALESVSFAIDQLKTRVPIWKKEI 127

Query: 134 Y--SNGEVWKENSE 145
           Y   N   WKEN E
Sbjct: 128 YDGDNDSEWKENKE 141

Catalytic subunit of the molybdopterin synthase complex, a complex that catalyzes the conversion of precursor Z into molybdopterin. Acts by mediating the incorporation of 2 sulfur atoms from thiocarboxylated MOCS2A into precursor Z to generate a dithiolene group.

Drosophila melanogaster (taxid: 7227)

EC: 2

EC: .

EC: 8

EC: .

EC: 1

EC: .

EC: 1

EC: 2

>sp|O96007|MOC2B_HUMAN Molybdopterin synthase catalytic subunit OS=Homo sapiens GN=MOCS2 PE=1 SV=1

 Score =  130 bits (328), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 63/119 (52%), Positives = 79/119 (66%)

Query: 27  VSAPQAGAIATFSGTTRDTFDGKIVVELRYESYVSMAIRCIKSICSLARSSWNLHSIAVA 86
           V +P  GAI+ F GTTR+ F+GK V+ L YE+Y+ MA   ++ ICS  R  W +  IAV 
Sbjct: 63  VISPLCGAISLFVGTTRNNFEGKKVISLEYEAYLPMAENEVRKICSDIRQKWPVKHIAVF 122

Query: 87  HRLGPVPVGETSVFIAVSAVHRADALDACKFLIDELKASVPIWKKEVYSNGEVWKENSE 145
           HRLG VPV E S+ IAVS+ HRA +L+A  + ID LKA VPIWKKE+Y     WK N E
Sbjct: 123 HRLGLVPVSEASIIIAVSSAHRAASLEAVSYAIDTLKAKVPIWKKEIYEESSTWKGNKE 181

Catalytic subunit of the molybdopterin synthase complex, a complex that catalyzes the conversion of precursor Z into molybdopterin. Acts by mediating the incorporation of 2 sulfur atoms from thiocarboxylated MOCS2A into precursor Z to generate a dithiolene group.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 8

EC: .

EC: 1

EC: .

EC: 1

EC: 2

>sp|Q171H3|MO2B1_AEDAE Molybdopterin synthase catalytic subunit 1 OS=Aedes aegypti GN=AAEL007640 PE=3 SV=1

 Score =  130 bits (327), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 66/123 (53%), Positives = 83/123 (67%), Gaps = 4/123 (3%)

Query: 27  VSAPQAGAIATFSGTTRDTFDGKIVVELRYESYVSMAIRCIKSICSLARSSW-NLHSIAV 85
           V+    GAI+ F GTTRD FDGK VV L YE+Y +MA++ +  IC   R+ W ++  I +
Sbjct: 20  VAHESCGAISLFVGTTRDNFDGKTVVLLEYEAYEAMALKTMNQICEELRARWPDIKHIGI 79

Query: 86  AHRLGPVPVGETSVFIAVSAVHRADALDACKFLIDELKASVPIWKKEVYSNGE---VWKE 142
            HRLG VPV E SV IAVS+ HR  +L+A  F IDELK SVP+WKKE Y++GE    WKE
Sbjct: 80  HHRLGTVPVKEASVVIAVSSPHRKSSLEAVHFAIDELKKSVPVWKKEQYADGEGCSEWKE 139

Query: 143 NSE 145
           N E
Sbjct: 140 NKE 142

Catalytic subunit of the molybdopterin synthase complex, a complex that catalyzes the conversion of precursor Z into molybdopterin. Acts by mediating the incorporation of 2 sulfur atoms from thiocarboxylated MOCS2A into precursor Z to generate a dithiolene group.

Aedes aegypti (taxid: 7159)

EC: 2

EC: .

EC: 8

EC: .

EC: 1

EC: .

EC: 1

EC: 2

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	196
224059676	201	predicted protein [Populus trichocarpa]	0.984	0.960	0.769	6e-82
255564476	192	molybdopterin synthase large subunit, pu	0.938	0.958	0.784	1e-81
356577365	188	PREDICTED: molybdopterin synthase cataly	0.948	0.989	0.75	5e-81
255638574	188	unknown [Glycine max]	0.943	0.984	0.744	9e-79
388494140	190	unknown [Lotus japonicus]	0.943	0.973	0.759	2e-78
356521709	188	PREDICTED: molybdopterin synthase cataly	0.943	0.984	0.744	2e-78
225435950	235	PREDICTED: molybdopterin synthase cataly	0.943	0.787	0.738	3e-77
357458805	192	Molybdopterin synthase catalytic subunit	0.959	0.979	0.735	3e-77
225435939	235	PREDICTED: molybdopterin synthase cataly	0.948	0.791	0.747	3e-77
449444837	236	PREDICTED: molybdopterin synthase cataly	0.948	0.788	0.754	2e-76

>gi|224059676|ref|XP_002299965.1| predicted protein [Populus trichocarpa] gi|222847223|gb|EEE84770.1| predicted protein [Populus trichocarpa]

 Score =  308 bits (790), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 150/195 (76%), Positives = 169/195 (86%), Gaps = 2/195 (1%)

Query: 1   MAGEDRTLVEILEENNPVDMTKYMTYVSAPQAGAIATFSGTTRDTFDGKIVVELRYESYV 60
           MA E++TLVEILEENN +D+ KY+ YVSA QAGAIATFSGTTRDTF+GK VVELRYE+YV
Sbjct: 1   MATEEKTLVEILEENNLIDLAKYVNYVSASQAGAIATFSGTTRDTFEGKTVVELRYEAYV 60

Query: 61  SMAIRCIKSICSLARSSWNLHSIAVAHRLGPVPVGETSVFIAVSAVHRADALDACKFLID 120
            MAIR +KSICS ARSSW++HSIAV HRLG VPVGE SVFIAVSAVHRADALDACKFLID
Sbjct: 61  PMAIRQMKSICSSARSSWDIHSIAVVHRLGTVPVGEMSVFIAVSAVHRADALDACKFLID 120

Query: 121 ELKASVPIWKKEVYSNGEVWKENSEFMERRLDLGKKDGICCGSGREVPVKSHARKTCCGA 180
           ELKASVPIWKKEVYSNGEVWKENSEFM+R+L+LGK +G CC   R V V++H  K+CCGA
Sbjct: 121 ELKASVPIWKKEVYSNGEVWKENSEFMDRKLELGKTNGSCC--RRNVKVETHGTKSCCGA 178

Query: 181 KVKVDDEGLANINSS 195
           KVKV D   A I++S
Sbjct: 179 KVKVADGAAAEISTS 193

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255564476|ref|XP_002523234.1| molybdopterin synthase large subunit, putative [Ricinus communis] gi|223537530|gb|EEF39155.1| molybdopterin synthase large subunit, putative [Ricinus communis]

 Score =  308 bits (788), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 146/186 (78%), Positives = 166/186 (89%), Gaps = 2/186 (1%)

Query: 1   MAGEDRTLVEILEENNPVDMTKYMTYVSAPQAGAIATFSGTTRDTFDGKIVVELRYESYV 60
           M  E++TLVEILEENNP+D+ KY+ YVSAPQAGAIATFSGTTRDTF+GK VVELRYE+YV
Sbjct: 2   MGSEEKTLVEILEENNPIDLAKYINYVSAPQAGAIATFSGTTRDTFEGKTVVELRYEAYV 61

Query: 61  SMAIRCIKSICSLARSSWNLHSIAVAHRLGPVPVGETSVFIAVSAVHRADALDACKFLID 120
            MAIR +KSICS AR SWN+HSIAVAHRLG VPVGETSVF+AVSAVHR DALDACKF ID
Sbjct: 62  PMAIRQLKSICSSARLSWNIHSIAVAHRLGSVPVGETSVFVAVSAVHRTDALDACKFAID 121

Query: 121 ELKASVPIWKKEVYSNGEVWKENSEFMERRLDLGKKDGICCGSGREVPVKSHARKTCCGA 180
           ELKASVPIWKKEVYSNGEVWKENSEFMERRL++GK +G CC   ++V V++H+ K+CCGA
Sbjct: 122 ELKASVPIWKKEVYSNGEVWKENSEFMERRLEIGKPEGGCC--RKKVEVETHSAKSCCGA 179

Query: 181 KVKVDD 186
           KVKV +
Sbjct: 180 KVKVSE 185

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356577365|ref|XP_003556797.1| PREDICTED: molybdopterin synthase catalytic subunit-like [Glycine max]

 Score =  305 bits (782), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 141/188 (75%), Positives = 165/188 (87%), Gaps = 2/188 (1%)

Query: 2   AGEDRTLVEILEENNPVDMTKYMTYVSAPQAGAIATFSGTTRDTFDGKIVVELRYESYVS 61
           A ED+ LVEILE  NP+D+ KYM +VSAPQAGAIATFSGTTRDTF+GK V+ELRYE+YV 
Sbjct: 3   AEEDKNLVEILENQNPIDVAKYMNFVSAPQAGAIATFSGTTRDTFEGKTVMELRYEAYVP 62

Query: 62  MAIRCIKSICSLARSSWNLHSIAVAHRLGPVPVGETSVFIAVSAVHRADALDACKFLIDE 121
           MAIRCIKSICS AR+SWNLHSIA AHRLG VPVGETSVF+AVS+VHRADAL+AC+F IDE
Sbjct: 63  MAIRCIKSICSSARASWNLHSIAAAHRLGTVPVGETSVFVAVSSVHRADALEACRFFIDE 122

Query: 122 LKASVPIWKKEVYSNGEVWKENSEFMERRLDLGKKDGICCGSGREVPVKSHARKTCCGAK 181
           +KA VPIWKKEVYSNGEVWKENSEF+ERR +LG KD  CC   ++V +K H++K+CCG K
Sbjct: 123 IKAQVPIWKKEVYSNGEVWKENSEFLERRSELGNKDAGCC--EKKVEIKEHSKKSCCGTK 180

Query: 182 VKVDDEGL 189
           V+VD+EG+
Sbjct: 181 VRVDNEGI 188

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255638574|gb|ACU19594.1| unknown [Glycine max]

 Score =  298 bits (762), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 140/188 (74%), Positives = 161/188 (85%), Gaps = 3/188 (1%)

Query: 1   MAGED-RTLVEILEENNPVDMTKYMTYVSAPQAGAIATFSGTTRDTFDGKIVVELRYESY 59
           MA ED R LVEI+E  NP+D+ KYM +V APQAGAIATFSGTTRDTF+GK VVELRYE+Y
Sbjct: 1   MAAEDDRNLVEIMETLNPIDVAKYMNFVGAPQAGAIATFSGTTRDTFEGKTVVELRYEAY 60

Query: 60  VSMAIRCIKSICSLARSSWNLHSIAVAHRLGPVPVGETSVFIAVSAVHRADALDACKFLI 119
           V MAIRCIKSICS AR+SWN+HS+AVAHRLG VPVGETSVF+AVS+VHRADAL+AC+FLI
Sbjct: 61  VPMAIRCIKSICSSARASWNIHSVAVAHRLGTVPVGETSVFVAVSSVHRADALEACRFLI 120

Query: 120 DELKASVPIWKKEVYSNGEVWKENSEFMERRLDLGKKDGICCGSGREVPVKSHARKTCCG 179
           DE+KA VPIWKKEVYSNGEVWKENSEF+ERR +LG K+  CCG   E  +K H +K+CC 
Sbjct: 121 DEIKAQVPIWKKEVYSNGEVWKENSEFLERRFELGNKNAACCGKKAE--IKEHNKKSCCR 178

Query: 180 AKVKVDDE 187
            KV+ DDE
Sbjct: 179 TKVRADDE 186

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388494140|gb|AFK35136.1| unknown [Lotus japonicus]

 Score =  297 bits (761), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 142/187 (75%), Positives = 163/187 (87%), Gaps = 2/187 (1%)

Query: 2   AGEDRTLVEILEENNPVDMTKYMTYVSAPQAGAIATFSGTTRDTFDGKIVVELRYESYVS 61
           A +D+ LVEILE  NP+D+ KYM YVSAPQAGAIATFSGTTRDTF+GK V+EL YE+YV 
Sbjct: 3   AEDDKNLVEILETPNPIDVGKYMNYVSAPQAGAIATFSGTTRDTFEGKAVLELIYEAYVP 62

Query: 62  MAIRCIKSICSLARSSWNLHSIAVAHRLGPVPVGETSVFIAVSAVHRADALDACKFLIDE 121
           MAIRCI S+CS AR+SWNLHSIAVAHRLG VPVGETSVFIAVS+VHRADAL+ACK+LIDE
Sbjct: 63  MAIRCINSVCSSARASWNLHSIAVAHRLGTVPVGETSVFIAVSSVHRADALEACKYLIDE 122

Query: 122 LKASVPIWKKEVYSNGEVWKENSEFMERRLDLGKKDGICCGSGREVPVKSHARKTCCGAK 181
           LKA+VPIWKKEVYSNGEVWKENSEF++RR +LG KD  C  SG +  VK H++K CCG K
Sbjct: 123 LKATVPIWKKEVYSNGEVWKENSEFLDRRSELGNKDVAC--SGEKAEVKDHSKKRCCGTK 180

Query: 182 VKVDDEG 188
           V+VD+EG
Sbjct: 181 VRVDNEG 187

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356521709|ref|XP_003529494.1| PREDICTED: molybdopterin synthase catalytic subunit-like [Glycine max]

 Score =  297 bits (760), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 140/188 (74%), Positives = 161/188 (85%), Gaps = 3/188 (1%)

Query: 1   MAGED-RTLVEILEENNPVDMTKYMTYVSAPQAGAIATFSGTTRDTFDGKIVVELRYESY 59
           MA ED R LVEI+E  NP+D+ KYM +V APQAGAIATFSGTTRDTF+GK VVELRYE+Y
Sbjct: 1   MAAEDDRNLVEIMETLNPIDVAKYMNFVGAPQAGAIATFSGTTRDTFEGKTVVELRYEAY 60

Query: 60  VSMAIRCIKSICSLARSSWNLHSIAVAHRLGPVPVGETSVFIAVSAVHRADALDACKFLI 119
           V MAIRCIKSICS AR+SWN+HS+AVAHRLG VPVGETSVF+AVS+VHRADAL+AC+FLI
Sbjct: 61  VPMAIRCIKSICSSARASWNIHSVAVAHRLGTVPVGETSVFVAVSSVHRADALEACRFLI 120

Query: 120 DELKASVPIWKKEVYSNGEVWKENSEFMERRLDLGKKDGICCGSGREVPVKSHARKTCCG 179
           DE+KA VPIWKKEVYSNGEVWKENSEF+ERR +LG K+  CCG   E  +K H +K+CC 
Sbjct: 121 DEIKAQVPIWKKEVYSNGEVWKENSEFLERRSELGNKNAACCGKKAE--IKEHNKKSCCR 178

Query: 180 AKVKVDDE 187
            KV+ DDE
Sbjct: 179 TKVRADDE 186

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225435950|ref|XP_002268624.1| PREDICTED: molybdopterin synthase catalytic subunit [Vitis vinifera]

 Score =  293 bits (750), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 141/191 (73%), Positives = 165/191 (86%), Gaps = 6/191 (3%)

Query: 1   MAGEDRTLVEILEENNPVDMTKYMTYVSAPQAGAIATFSGTTRDTFDGKIVVELRYESYV 60
           MA E+R LVEILEE+N +D+ KY+ YVSAPQAGA+ATFSGTTRDTFDG  VVELRYE+YV
Sbjct: 1   MADEERNLVEILEEHNVIDIAKYINYVSAPQAGAVATFSGTTRDTFDGNTVVELRYEAYV 60

Query: 61  SMAIRCIKSICSLARSSWNLHSIAVAHRLGPVPVGETSVFIAVSAVHRADALDACKFLID 120
            MAIRCI  ICS AR+SW+L SIAVAHRLGPVPVGETS+FIA+S+VHRADALDACKF+ID
Sbjct: 61  PMAIRCINDICSSARASWSLISIAVAHRLGPVPVGETSIFIAISSVHRADALDACKFVID 120

Query: 121 ELKASVPIWKKEVYSNGEVWKENSEFMERRLDLG----KKDGICCGSGREVPVKSHARKT 176
           E+KASVPIWKKEVY+NGEVWKENSEF+ERR +LG    ++ G CC   R+V V++  RK+
Sbjct: 121 EIKASVPIWKKEVYANGEVWKENSEFLERRSELGNAGLQQGGTCC--SRKVKVEAKERKS 178

Query: 177 CCGAKVKVDDE 187
           CCGAKVKV+ E
Sbjct: 179 CCGAKVKVEGE 189

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357458805|ref|XP_003599683.1| Molybdopterin synthase catalytic subunit [Medicago truncatula] gi|355488731|gb|AES69934.1| Molybdopterin synthase catalytic subunit [Medicago truncatula]

 Score =  293 bits (749), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 139/189 (73%), Positives = 164/189 (86%), Gaps = 1/189 (0%)

Query: 1   MAGED-RTLVEILEENNPVDMTKYMTYVSAPQAGAIATFSGTTRDTFDGKIVVELRYESY 59
           MA ED + L+EI+E  N +D+ KYM +VSAPQAGAIATFSGTTRDTFDGKIVVEL YE+Y
Sbjct: 1   MAAEDNKDLIEIVENLNSIDVAKYMNFVSAPQAGAIATFSGTTRDTFDGKIVVELIYEAY 60

Query: 60  VSMAIRCIKSICSLARSSWNLHSIAVAHRLGPVPVGETSVFIAVSAVHRADALDACKFLI 119
           + MAIRCIKS+CS AR SWNLHSIAVAHRLG VPVG TSVFIAVS+VHRADAL+AC++LI
Sbjct: 61  IPMAIRCIKSVCSSARESWNLHSIAVAHRLGTVPVGGTSVFIAVSSVHRADALEACRYLI 120

Query: 120 DELKASVPIWKKEVYSNGEVWKENSEFMERRLDLGKKDGICCGSGREVPVKSHARKTCCG 179
           DE+KA+VPIWKKEVYSNGEVWKEN+EF+ERR +LGKKD +   S ++  +K H++K CCG
Sbjct: 121 DEIKATVPIWKKEVYSNGEVWKENTEFLERRSELGKKDVVADCSVKKSEIKEHSKKLCCG 180

Query: 180 AKVKVDDEG 188
            KV+VDDEG
Sbjct: 181 NKVRVDDEG 189

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225435939|ref|XP_002268188.1| PREDICTED: molybdopterin synthase catalytic subunit [Vitis vinifera]

 Score =  293 bits (749), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 142/190 (74%), Positives = 166/190 (87%), Gaps = 4/190 (2%)

Query: 1   MAGEDRTLVEILEENNPVDMTKYMTYVSAPQAGAIATFSGTTRDTFDGKIVVELRYESYV 60
           MA E+R LVEILEE+N +D+ KY+ YVSAPQAGA+ATFSGTTRDTFDGK VVELRYE+YV
Sbjct: 1   MADEERNLVEILEEHNVIDIAKYINYVSAPQAGAVATFSGTTRDTFDGKTVVELRYEAYV 60

Query: 61  SMAIRCIKSICSLARSSWNLHSIAVAHRLGPVPVGETSVFIAVSAVHRADALDACKFLID 120
            MAIRCI  ICS AR+SW+L SIAVAHRLGPVPVGETS+FIA+S+VHRADALDACKF+ID
Sbjct: 61  PMAIRCINDICSSARASWSLISIAVAHRLGPVPVGETSIFIAISSVHRADALDACKFVID 120

Query: 121 ELKASVPIWKKEVYSNGEVWKENSEFMERRLDLGK---KDGICCGSGREVPVKSHARKTC 177
           E+KASVPIWKKEVY+NGEVWKENSEF+ERR +LG    ++G  C S R+V V++  RK+C
Sbjct: 121 EIKASVPIWKKEVYANGEVWKENSEFLERRSELGNAGLQEGRTCCS-RKVKVETQERKSC 179

Query: 178 CGAKVKVDDE 187
           CGAKVKV+ E
Sbjct: 180 CGAKVKVEGE 189

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449444837|ref|XP_004140180.1| PREDICTED: molybdopterin synthase catalytic subunit-like [Cucumis sativus] gi|449481037|ref|XP_004156063.1| PREDICTED: molybdopterin synthase catalytic subunit-like [Cucumis sativus]

 Score =  290 bits (741), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 141/187 (75%), Positives = 159/187 (85%), Gaps = 1/187 (0%)

Query: 1   MAGEDRTLVEILEENNPVDMTKYMTYVSAPQAGAIATFSGTTRDTFDGKIVVELRYESYV 60
           M  E+RT VEILE+N P+DM KY+T+VSAPQAGAI+TFSGTTRD F+GK VVELRYE+YV
Sbjct: 1   MTSEERTFVEILEDNIPIDMAKYITFVSAPQAGAISTFSGTTRDNFEGKTVVELRYEAYV 60

Query: 61  SMAIRCIKSICSLARSSWNLHSIAVAHRLGPVPVGETSVFIAVSAVHRADALDACKFLID 120
            MAIR IKSICS ARSSWNLHSIAVAHRLGPVPVGE SVFIAVSAVHRADA+D C+F+ID
Sbjct: 61  PMAIRSIKSICSSARSSWNLHSIAVAHRLGPVPVGEISVFIAVSAVHRADAMDCCRFVID 120

Query: 121 ELKASVPIWKKEVYSNGEVWKENSEFMERRLDLGKKDGICCGSGREVPVKSHARKTCCGA 180
           ELKA VPIWKKEVY NGEVWKENSEFM+RRL+L  K+G    +  E  V  H RK+CCG+
Sbjct: 121 ELKACVPIWKKEVYDNGEVWKENSEFMDRRLELVNKEGD-DHNENETAVVRHNRKSCCGS 179

Query: 181 KVKVDDE 187
           KVKV +E
Sbjct: 180 KVKVMNE 186

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	196
TAIR|locus:2043944	198	AT2G43760 "AT2G43760" [Arabido	0.933	0.924	0.691	1.3e-68
UNIPROTKB|B4JHP4	362	GH19575 "Molybdopterin synthas	0.668	0.361	0.492	1.4e-31
UNIPROTKB|B4NJW0	372	GK13883 "Molybdopterin synthas	0.688	0.362	0.478	4.9e-30
UNIPROTKB|Q297G3	361	GA10181 "Molybdopterin synthas	0.734	0.398	0.479	4.9e-30
ZFIN|ZDB-GENE-110411-53	159	mocs2 "molybdenum cofactor syn	0.607	0.748	0.537	6.2e-30
UNIPROTKB|B4GE20	361	GL21938 "Molybdopterin synthas	0.734	0.398	0.479	7.9e-30
UNIPROTKB|O96007	188	MOCS2 "Molybdopterin synthase	0.714	0.744	0.464	1e-29
UNIPROTKB|E2R0Y2	200	MOCS2 "Uncharacterized protein	0.704	0.69	0.482	2.7e-29
UNIPROTKB|E2RI62	185	MOCS2 "Uncharacterized protein	0.704	0.745	0.482	2.7e-29
UNIPROTKB|A4FUY7	189	MOCS2 "Molybdopterin synthase	0.714	0.740	0.475	3.4e-29

TAIR|locus:2043944 AT2G43760 "AT2G43760" [Arabidopsis thaliana (taxid:3702)]

 Score = 696 (250.1 bits), Expect = 1.3e-68, P = 1.3e-68
 Identities = 130/188 (69%), Positives = 160/188 (85%)

Query:     1 MAGEDRTLVEILEENNPVDMTKYMTYVSAPQAGAIATFSGTTRDTFDGKIVVELRYESYV 60
             M+ E++ L+EILEE + VD+ KY+ YVSAPQAGAIATFSGTTRD F+GK V+ELRYE+YV
Sbjct:     1 MSAEEKNLIEILEEGHKVDVVKYIDYVSAPQAGAIATFSGTTRDMFEGKTVLELRYEAYV 60

Query:    61 SMAIRCIKSICSLARSSWNLHSIAVAHRLGPVPVGETSVFIAVSAVHRADALDACKFLID 120
              MA RC+ SIC+ ARS+W++H IAVAHRLGPVPVGETSV IAVS+VHRAD LDACKFLID
Sbjct:    61 PMATRCLSSICTTARSTWDIHKIAVAHRLGPVPVGETSVLIAVSSVHRADGLDACKFLID 120

Query:   121 ELKASVPIWKKEVYSNGEVWKENSEFMERRLDLG-KKDGICCGSGREVPVKSHARKTCCG 179
             ELKASVPIWKKEVY+NGE+WKENSEFME+RL+L  K+D I     ++  V+ H R+ CCG
Sbjct:   121 ELKASVPIWKKEVYTNGEIWKENSEFMEKRLELAEKRDSIV----KKTVVEEHRRRGCCG 176

Query:   180 AKVKVDDE 187
             +KV+V+++
Sbjct:   177 SKVRVEED 184

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=ISM

GO:0006777 "Mo-molybdopterin cofactor biosynthetic process" evidence=IEA;ISS

UNIPROTKB|B4JHP4 GH19575 "Molybdopterin synthase catalytic subunit" [Drosophila grimshawi (taxid:7222)]

 Score = 326 (119.8 bits), Expect = 1.4e-31, Sum P(2) = 1.4e-31
 Identities = 66/134 (49%), Positives = 86/134 (64%)

Query:    15 NNPVDMTKYMTYVSAPQAGAIATFSGTTRDTFDGKIVVELRYESYVSMAIRCIKSICSLA 74
             N+ +D+      +     GA + F GTTRD FDGK V+ L YESY  MA++ +  ICS  
Sbjct:     8 NSQIDINHIHNLLIDESCGASSVFVGTTRDNFDGKKVISLEYESYEKMALKEMSKICSQL 67

Query:    75 RSSW-NLHSIAVAHRLGPVPVGETSVFIAVSAVHRADALDACKFLIDELKASVPIWKKEV 133
             R+ W +L  IA+ HRLG VPV E SV IA SA HRA AL++  F +++LK+ VPIWKKE+
Sbjct:    68 RARWPDLKHIAIYHRLGTVPVKEASVVIATSAPHRAAALESVTFAVEQLKSRVPIWKKEI 127

Query:   134 YSNGEV--WKENSE 145
             Y N  +  WKEN E
Sbjct:   128 YENDTIGEWKENME 141

GO:0005829 "cytosol" evidence=ISS

GO:0006777 "Mo-molybdopterin cofactor biosynthetic process" evidence=ISS

GO:0030366 "Mo-molybdopterin synthase activity" evidence=ISS

UNIPROTKB|B4NJW0 GK13883 "Molybdopterin synthase catalytic subunit" [Drosophila willistoni (taxid:7260)]

 Score = 332 (121.9 bits), Expect = 4.9e-30, P = 4.9e-30
 Identities = 67/140 (47%), Positives = 93/140 (66%)

Query:     9 VEILEENNPVDMTKYMTYVSAPQAGAIATFSGTTRDTFDGKIVVELRYESYVSMAIRCIK 68
             +E++  ++P+D+T   T +  P  GA + F GTTRD+F+GK V+ L YE+Y  MAI+ +K
Sbjct:     4 IELI--SSPLDITTLYTLLGDPGCGASSVFVGTTRDSFEGKKVLSLEYEAYEPMAIKEMK 61

Query:    69 SICSLARSSW-NLHSIAVAHRLGPVPVGETSVFIAVSAVHRADALDACKFLIDELKASVP 127
             +IC+  R+ W +L  I + HRLG VPVGE SV IA SA HR  AL++    +D+LK  VP
Sbjct:    62 TICTDLRAKWPDLKHIVIYHRLGSVPVGEASVVIATSAPHRLSALESVSLAVDQLKTRVP 121

Query:   128 IWKKEVYSNGEV--WKENSE 145
             IWKKE+Y   +   WKEN E
Sbjct:   122 IWKKELYEGDDPAQWKENKE 141

GO:0005829 "cytosol" evidence=ISS

GO:0006777 "Mo-molybdopterin cofactor biosynthetic process" evidence=ISS

GO:0030366 "Mo-molybdopterin synthase activity" evidence=ISS

UNIPROTKB|Q297G3 GA10181 "Molybdopterin synthase catalytic subunit" [Drosophila pseudoobscura pseudoobscura (taxid:46245)]

 Score = 332 (121.9 bits), Expect = 4.9e-30, P = 4.9e-30
 Identities = 71/148 (47%), Positives = 95/148 (64%)

Query:    17 PVDMTKYMTYVSAPQAGAIATFSGTTRDTFDGKIVVELRYESYVSMAIRCIKSICSLARS 76
             P+D+T  +  +S P  GA + F GTTRD+F GK VV L YE+Y +MA++ +  ICS  R+
Sbjct:    10 PIDVTYAINLISDPSCGASSIFIGTTRDSFQGKKVVSLAYEAYENMALKEMDKICSDLRA 69

Query:    77 SW-NLHSIAVAHRLGPVPVGETSVFIAVSAVHRADALDACKFLIDELKASVPIWKKEVYS 135
             +W +L  I + HRLG VP  E SV IA SA HR+ AL A  F ID+LK+ VPIWKKE+Y 
Sbjct:    70 TWPDLKHILIYHRLGTVPENEASVVIAASAPHRSAALKAVTFAIDQLKSRVPIWKKEIYE 129

Query:   136 -NGEV-WKENSEFMERRLDLGKKD-GIC 160
              N +  WKENSE +  +  L   +  +C
Sbjct:   130 GNHDAEWKENSESIRPKKSLSSFNYSVC 157

GO:0005829 "cytosol" evidence=ISS

GO:0006777 "Mo-molybdopterin cofactor biosynthetic process" evidence=ISS

GO:0030366 "Mo-molybdopterin synthase activity" evidence=ISS

ZFIN|ZDB-GENE-110411-53 mocs2 "molybdenum cofactor synthesis 2" [Danio rerio (taxid:7955)]

 Score = 331 (121.6 bits), Expect = 6.2e-30, P = 6.2e-30
 Identities = 65/121 (53%), Positives = 84/121 (69%)

Query:    27 VSAPQAGAIATFSGTTRDTFDGKIVVELRYESYVSMAIRCIKSICSLARSSW-NLHSIAV 85
             V+ P  GA++ F GTTRD F+GK VV L YE+Y  MA   +K ICS  R+ W ++  I +
Sbjct:    26 VTCPSCGAVSLFIGTTRDNFEGKKVVRLEYEAYAPMAESKLKKICSHIRTKWPSVRHINI 85

Query:    86 AHRLGPVPVGETSVFIAVSAVHRADALDACKFLIDELKASVPIWKKEVYSNGE-VWKENS 144
              HRLG V V E SV I +S+ HR+D+L+A K+ ID LKA+VPIWKKE+Y +GE  WKEN 
Sbjct:    86 QHRLGLVSVTEASVIIGISSPHRSDSLEALKYCIDTLKATVPIWKKEIYESGEPCWKENK 145

Query:   145 E 145
             E
Sbjct:   146 E 146

GO:0006777 "Mo-molybdopterin cofactor biosynthetic process" evidence=IEA

UNIPROTKB|B4GE20 GL21938 "Molybdopterin synthase catalytic subunit" [Drosophila persimilis (taxid:7234)]

 Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
 Identities = 71/148 (47%), Positives = 95/148 (64%)

Query:    17 PVDMTKYMTYVSAPQAGAIATFSGTTRDTFDGKIVVELRYESYVSMAIRCIKSICSLARS 76
             P+D+T  +  +S P  GA + F GTTRD+F GK VV L YE+Y +MA++ +  ICS  R+
Sbjct:    10 PIDVTYAINLISDPSCGASSIFIGTTRDSFQGKKVVSLAYEAYENMALKEMDKICSDLRA 69

Query:    77 SW-NLHSIAVAHRLGPVPVGETSVFIAVSAVHRADALDACKFLIDELKASVPIWKKEVYS 135
             +W +L  I + HRLG VP  E SV IA SA HR+ AL A  F ID+LK+ VPIWKKE+Y 
Sbjct:    70 TWPDLKHILIYHRLGTVPENEASVVIAASAPHRSAALKAVTFAIDQLKSRVPIWKKELYE 129

Query:   136 -NGEV-WKENSEFMERRLDLGKKD-GIC 160
              N +  WKENSE +  +  L   +  +C
Sbjct:   130 GNHDAEWKENSESIRPKKSLSSFNYSVC 157

GO:0005829 "cytosol" evidence=ISS

GO:0006777 "Mo-molybdopterin cofactor biosynthetic process" evidence=ISS

GO:0030366 "Mo-molybdopterin synthase activity" evidence=ISS

UNIPROTKB|O96007 MOCS2 "Molybdopterin synthase catalytic subunit" [Homo sapiens (taxid:9606)]

 Score = 329 (120.9 bits), Expect = 1.0e-29, P = 1.0e-29
 Identities = 66/142 (46%), Positives = 87/142 (61%)

Query:     4 EDRTLVEILEENNPVDMTKYMTYVSAPQAGAIATFSGTTRDTFDGKIVVELRYESYVSMA 63
             + + ++    E   VD    +  V +P  GAI+ F GTTR+ F+GK V+ L YE+Y+ MA
Sbjct:    42 KSKDVINFTAEKLSVDEVSQL--VISPLCGAISLFVGTTRNNFEGKKVISLEYEAYLPMA 99

Query:    64 IRCIKSICSLARSSWNLHSIAVAHRLGPVPVGETSVFIAVSAVHRADALDACKFLIDELK 123
                ++ ICS  R  W +  IAV HRLG VPV E S+ IAVS+ HRA +L+A  + ID LK
Sbjct:   100 ENEVRKICSDIRQKWPVKHIAVFHRLGLVPVSEASIIIAVSSAHRAASLEAVSYAIDTLK 159

Query:   124 ASVPIWKKEVYSNGEVWKENSE 145
             A VPIWKKE+Y     WK N E
Sbjct:   160 AKVPIWKKEIYEESSTWKGNKE 181

GO:0016740 "transferase activity" evidence=IEA

GO:0042802 "identical protein binding" evidence=IEA

GO:0006777 "Mo-molybdopterin cofactor biosynthetic process" evidence=IDA

GO:0019008 "molybdopterin synthase complex" evidence=IPI

GO:0030366 "Mo-molybdopterin synthase activity" evidence=IDA;TAS

GO:0005829 "cytosol" evidence=IDA;TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

GO:0006766 "vitamin metabolic process" evidence=TAS

GO:0006767 "water-soluble vitamin metabolic process" evidence=TAS

GO:0032324 "molybdopterin cofactor biosynthetic process" evidence=TAS

GO:0005634 "nucleus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

UNIPROTKB|E2R0Y2 MOCS2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
 Identities = 68/141 (48%), Positives = 88/141 (62%)

Query:     6 RTLVEILEENNPVDMTKYMTYVSAPQAGAIATFSGTTRDTFDGKIVVELRYESYVSMAIR 65
             + +++   E   VD    +  V +P  GA++ F GTTR+ F+GK V+ L YE+Y+ MA  
Sbjct:    55 KDIIKFTAEKLSVDEVSQL--VISPLCGAVSLFVGTTRNNFEGKKVISLEYEAYLPMAEN 112

Query:    66 CIKSICSLARSSWNLHSIAVAHRLGPVPVGETSVFIAVSAVHRADALDACKFLIDELKAS 125
              I+ ICS  R  W +  IAV HRLG VPV E SV IAVS+VHRA +L A  + ID LKA 
Sbjct:   113 EIRKICSDIRQKWPVKHIAVFHRLGLVPVSEASVIIAVSSVHRASSLQAVSYAIDTLKAK 172

Query:   126 VPIWKKEVYS-NGEVWKENSE 145
             VPIWKKE+Y  +   WK N E
Sbjct:   173 VPIWKKEMYEESSSSWKRNKE 193

GO:0042802 "identical protein binding" evidence=IEA

GO:0030366 "Mo-molybdopterin synthase activity" evidence=IEA

GO:0019008 "molybdopterin synthase complex" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|E2RI62 MOCS2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
 Identities = 68/141 (48%), Positives = 88/141 (62%)

Query:     6 RTLVEILEENNPVDMTKYMTYVSAPQAGAIATFSGTTRDTFDGKIVVELRYESYVSMAIR 65
             + +++   E   VD    +  V +P  GA++ F GTTR+ F+GK V+ L YE+Y+ MA  
Sbjct:    44 KDIIKFTAEKLSVDEVSQL--VISPLCGAVSLFVGTTRNNFEGKKVISLEYEAYLPMAEN 101

Query:    66 CIKSICSLARSSWNLHSIAVAHRLGPVPVGETSVFIAVSAVHRADALDACKFLIDELKAS 125
              I+ ICS  R  W +  IAV HRLG VPV E SV IAVS+VHRA +L A  + ID LKA 
Sbjct:   102 EIRKICSDIRQKWPVKHIAVFHRLGLVPVSEASVIIAVSSVHRASSLQAVSYAIDTLKAK 161

Query:   126 VPIWKKEVYS-NGEVWKENSE 145
             VPIWKKE+Y  +   WK N E
Sbjct:   162 VPIWKKEMYEESSSSWKRNKE 182

GO:0006777 "Mo-molybdopterin cofactor biosynthetic process" evidence=IEA

UNIPROTKB|A4FUY7 MOCS2 "Molybdopterin synthase catalytic subunit" [Bos taurus (taxid:9913)]

 Score = 324 (119.1 bits), Expect = 3.4e-29, P = 3.4e-29
 Identities = 68/143 (47%), Positives = 89/143 (62%)

Query:     4 EDRTLVEILEENNPVDMTKYMTYVSAPQAGAIATFSGTTRDTFDGKIVVELRYESYVSMA 63
             + + +++   E   VD    +  V +P  GAI+ F GTTR+ F+GK V+ L YE+Y+ MA
Sbjct:    42 KSKDIIKFTSEKLSVDEVSQL--VISPLCGAISLFVGTTRNNFEGKKVISLEYEAYLPMA 99

Query:    64 IRCIKSICSLARSSWNLHSIAVAHRLGPVPVGETSVFIAVSAVHRADALDACKFLIDELK 123
                I+ ICS  R  W +  IAV HRLG VPV E SV IAVS+ HRA +L+A  + ID LK
Sbjct:   100 ENEIRKICSDMRQKWPVRHIAVFHRLGLVPVTEASVIIAVSSAHRAASLEAVSYAIDALK 159

Query:   124 ASVPIWKKEVYS-NGEVWKENSE 145
             A VPIWKKE+Y  +   WK N E
Sbjct:   160 ARVPIWKKEIYEESSSSWKRNKE 182

GO:0005829 "cytosol" evidence=ISS

GO:0030366 "Mo-molybdopterin synthase activity" evidence=ISS

GO:0006777 "Mo-molybdopterin cofactor biosynthetic process" evidence=ISS

GO:0042802 "identical protein binding" evidence=IEA

GO:0019008 "molybdopterin synthase complex" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q6Z2X3	MOC2B_ORYSJ	2, ., 8, ., 1, ., 1, 2	0.5454	0.9132	0.9274	yes	no
A4FUY7	MOC2B_BOVIN	2, ., 8, ., 1, ., 1, 2	0.5416	0.6071	0.6296	yes	no
O96007	MOC2B_HUMAN	2, ., 8, ., 1, ., 1, 2	0.5294	0.6071	0.6329	yes	no
Q7QAD7	MOC2B_ANOGA	2, ., 8, ., 1, ., 1, 2	0.5203	0.6020	0.7662	yes	no
O22827	MOC2B_ARATH	2, ., 8, ., 1, ., 1, 2	0.6914	0.9336	0.9242	yes	no
A2X0R4	MOC2B_ORYSI	2, ., 8, ., 1, ., 1, 2	0.5401	0.9132	0.9274	N/A	no
Q9Z223	MOC2B_MOUSE	2, ., 8, ., 1, ., 1, 2	0.525	0.6071	0.6296	yes	no
B5FXU9	MOC2B_TAEGU	2, ., 8, ., 1, ., 1, 2	0.5333	0.6071	0.7677	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	estExt_Genewise1_v1.C_LG_I1954	molybdopterin synthase (201 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	fgenesh4_pg.C_LG_IX001324	molybderin biosynthesis protein (355 aa)	•		•			•	•		0.996
	eugene3.00140447	molybderin biosynthesis protein (213 aa)	•		•			•	•		0.996
	fgenesh4_pm.C_LG_I001118	hypothetical protein (460 aa)	•				•	•	•		0.983
	estExt_fgenesh4_pg.C_LG_XIX0639	molybdopterin synthase (101 aa)	•		•		•	•	•		0.980
	eugene3.187150001	Predicted protein (226 aa)	•		•			•	•		0.864
	eugene3.00090140	molybdopterin biosynthesis protein MoeA (653 aa)	•		•			•	•		0.850
	eugene3.29320001	annotation not avaliable (272 aa)	•		•				•		0.845
	fgenesh4_pg.C_scaffold_620000002	Predicted protein (498 aa)	•		•			•	•		0.805
	estExt_Genewise1_v1.C_LG_VII0255	cysteine desulfurase/transaminase (EC-2.8.1.7) (452 aa)	•					•	•		0.561
	gw1.148.104.1	annotation not avaliable (335 aa)			•						0.467

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	196
PLN02390	111	PLN02390, PLN02390, molybdopterin synthase catalyt	2e-72
cd00756	124	cd00756, MoaE, MoaE family	4e-55
pfam02391	117	pfam02391, MoaE, MoaE protein	5e-45
COG0314	149	COG0314, MoaE, Molybdopterin converting factor, la	9e-44
PRK10678	150	PRK10678, moaE, molybdopterin guanine dinucleotide	2e-25
PRK14493	274	PRK14493, PRK14493, putative bifunctional molybdop	4e-18

>gnl|CDD|178014 PLN02390, PLN02390, molybdopterin synthase catalytic subunit

 Score =  213 bits (545), Expect = 2e-72
 Identities = 91/111 (81%), Positives = 101/111 (90%)

Query: 29  APQAGAIATFSGTTRDTFDGKIVVELRYESYVSMAIRCIKSICSLARSSWNLHSIAVAHR 88
            PQAGAIATFSGTTRDTF+GK V+ELRYE+YV MA+R ++ IC  ARS W+LH IAVAHR
Sbjct: 1   DPQAGAIATFSGTTRDTFEGKTVLELRYEAYVPMALRELRKICDEARSRWSLHKIAVAHR 60

Query: 89  LGPVPVGETSVFIAVSAVHRADALDACKFLIDELKASVPIWKKEVYSNGEV 139
           LGPVPVGETSVF+AVS+VHRADALDACKFLIDELKASVPIWKKEVY +GEV
Sbjct: 61  LGPVPVGETSVFVAVSSVHRADALDACKFLIDELKASVPIWKKEVYDDGEV 111

Length = 111

>gnl|CDD|238385 cd00756, MoaE, MoaE family

 Score =  170 bits (434), Expect = 4e-55
 Identities = 55/115 (47%), Positives = 74/115 (64%)

Query: 27  VSAPQAGAIATFSGTTRDTFDGKIVVELRYESYVSMAIRCIKSICSLARSSWNLHSIAVA 86
           +  P+AGA+ TF GT RD  +GK V  L YE+Y  MA + ++ I   AR  W L  +A+ 
Sbjct: 10  LRDPEAGAVVTFVGTVRDHDEGKGVEALEYEAYPPMAEKELEEIAEEARERWGLLRVAII 69

Query: 87  HRLGPVPVGETSVFIAVSAVHRADALDACKFLIDELKASVPIWKKEVYSNGEVWK 141
           HR+G +P GE  V +AVS+ HR +A +AC+FLID LK   PIWKKE++  GE W 
Sbjct: 70  HRVGRLPPGEAIVLVAVSSPHRKEAFEACEFLIDRLKHRAPIWKKEIFEGGEEWV 124

Members of this family are involved in biosynthesis of the molybdenum cofactor (Moco), an essential cofactor for a diverse group of redox enzymes. Moco biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea and eukaryotes. Moco contains a tricyclic pyranopterin, termed molybdopterin (MPT), which carries the cis-dithiolene group responsible for molybdenum ligation. This dithiolene group is generated by MPT synthase in the second major step in Moco biosynthesis. MPT synthase is a heterotetramer consisting of two large (MoaE) and two small (MoaD) subunits. Length = 124

>gnl|CDD|111299 pfam02391, MoaE, MoaE protein

 Score =  144 bits (366), Expect = 5e-45
 Identities = 54/117 (46%), Positives = 70/117 (59%)

Query: 10  EILEENNPVDMTKYMTYVSAPQAGAIATFSGTTRDTFDGKIVVELRYESYVSMAIRCIKS 69
            I   + P+D+ + +  VS P AGAI TF GT RD   GK V  L YE+Y  MA + +  
Sbjct: 1   RIELTDEPIDVDEVIEKVSEPSAGAIVTFVGTVRDHNGGKRVSRLEYEAYPEMAEKELAE 60

Query: 70  ICSLARSSWNLHSIAVAHRLGPVPVGETSVFIAVSAVHRADALDACKFLIDELKASV 126
           I   AR  W    +AV HRLG + +GE +V IAVSA HR +A +AC++ IDELK  V
Sbjct: 61  IVEEAREKWPGIDVAVVHRLGELQIGEAAVLIAVSAPHRKEAFEACEYAIDELKKRV 117

This family contains the MoaE protein that is involved in biosynthesis of molybdopterin. Molybdopterin, the universal component of the pterin molybdenum cofactors, contains a dithiolene group serving to bind Mo. Addition of the dithiolene sulfurs to a molybdopterin precursor requires the activity of the converting factor. Converting factor contains the MoaE and MoaD proteins. Length = 117

>gnl|CDD|223391 COG0314, MoaE, Molybdopterin converting factor, large subunit [Coenzyme metabolism]

 Score =  142 bits (361), Expect = 9e-44
 Identities = 47/115 (40%), Positives = 70/115 (60%)

Query: 26  YVSAPQAGAIATFSGTTRDTFDGKIVVELRYESYVSMAIRCIKSICSLARSSWNLHSIAV 85
                +AGAI TF G  R+  DG+ V  L YE+Y  MA + ++ I + A+  W L  +A+
Sbjct: 22  LSEPSEAGAIVTFVGIVREENDGRRVEALEYEAYPEMAEKELEEIAAEAKEKWGLLRVAI 81

Query: 86  AHRLGPVPVGETSVFIAVSAVHRADALDACKFLIDELKASVPIWKKEVYSNGEVW 140
            HR+G + +GE  V + V++ HR +A +AC+++ID LK   PIWKKE   +GE W
Sbjct: 82  IHRIGELKIGEAIVLVGVASAHRKEAFEACEYIIDRLKHRAPIWKKEHTEDGERW 136

Length = 149

>gnl|CDD|182642 PRK10678, moaE, molybdopterin guanine dinucleotide biosynthesis protein MoaE; Provisional

 Score = 95.6 bits (238), Expect = 2e-25
 Identities = 41/110 (37%), Positives = 60/110 (54%)

Query: 33  GAIATFSGTTRDTFDGKIVVELRYESYVSMAIRCIKSICSLARSSWNLHSIAVAHRLGPV 92
           GA+ TF+G  R+   G  V  L  E Y  M  + +  I   ARS W L  + V HR+G +
Sbjct: 29  GAVVTFTGKVRNHNLGDSVKALTLEHYPGMTEKALAEIVDEARSRWPLGRVTVIHRVGEL 88

Query: 93  PVGETSVFIAVSAVHRADALDACKFLIDELKASVPIWKKEVYSNGEVWKE 142
             G+  VF+ V++ HR+ A +A +F++D LK   P WK+E    G+ W E
Sbjct: 89  WPGDEIVFVGVTSAHRSSAFEAGQFIMDYLKTRAPFWKREATPEGDRWVE 138

Length = 150

>gnl|CDD|237730 PRK14493, PRK14493, putative bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MobB/MoaE; Provisional

 Score = 79.3 bits (196), Expect = 4e-18
 Identities = 42/114 (36%), Positives = 59/114 (51%), Gaps = 2/114 (1%)

Query: 29  APQAGAIATFSGTTR--DTFDGKIVVELRYESYVSMAIRCIKSICSLARSSWNLHSIAVA 86
           A +AGAIATF+G  R  +  D +    L +E Y  +A   + +I    +    +  + + 
Sbjct: 156 ADKAGAIATFTGRVRAKEDADDEPTEYLEFEKYDGVADERMAAIREELKQRDGVFEVLLH 215

Query: 87  HRLGPVPVGETSVFIAVSAVHRADALDACKFLIDELKASVPIWKKEVYSNGEVW 140
           HR G +  GE  VF+ V A HR +A  A    ID LK  VPI+KKEV  + E W
Sbjct: 216 HRTGVIEAGEDIVFVVVLAGHRQEAFRAVSDGIDRLKDEVPIFKKEVTVDEEFW 269

Length = 274

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	196
PRK10678	150	moaE molybdopterin guanine dinucleotide biosynthes	100.0
COG0314	149	MoaE Molybdopterin converting factor, large subuni	100.0
cd00756	124	MoaE MoaE family. Members of this family are invol	100.0
PLN02390	111	molybdopterin synthase catalytic subunit	100.0
KOG3307	150	consensus Molybdopterin converting factor subunit	100.0
PRK14493	274	putative bifunctional molybdopterin-guanine dinucl	100.0
PF02391	117	MoaE: MoaE protein; InterPro: IPR003448 This famil	100.0
PRK11538	105	ribosome-associated protein; Provisional	83.45

>PRK10678 moaE molybdopterin guanine dinucleotide biosynthesis protein MoaE; Provisional

Probab=100.00  E-value=6.9e-49  Score=319.57  Aligned_cols=136  Identities=32%  Similarity=0.603  Sum_probs=129.0

Q ss_pred             EEcccCCCCHHHHHHHhc-CCCccEEEEEEEEEcCCCCCeeeeEEEEEEehhhHHHHHHHHHHHHHhccCCceEEEEEEe
Q 029283           11 ILEENNPVDMTKYMTYVS-APQAGAIATFSGTTRDTFDGKIVVELRYESYVSMAIRCIKSICSLARSSWNLHSIAVAHRL   89 (196)
Q Consensus        11 i~~~~~piDl~~~~~~v~-~~~~GAIv~F~G~VR~~~~G~~V~~L~yEay~~mA~k~L~~I~~ea~~~~~l~~v~I~HR~   89 (196)
                      +.++.+|||++++++.+. +|.+||+++|.|+||+.++|+.|++|+||+|+|||++.|++|+++++++|++.++.|+||+
T Consensus         6 v~it~~~id~~~~~~~~~~~~~~GAiv~F~G~VR~~~~g~~V~~L~yeay~~ma~k~l~~I~~ea~~~~~~~~v~i~HR~   85 (150)
T PRK10678          6 IVVGPAPFSVGEEYPWLAERDEDGAVVTFTGKVRNHNLGDSVKALTLEHYPGMTEKALAEIVDEARSRWPLGRVTVIHRV   85 (150)
T ss_pred             EEEEcCCCCHHHHHHHhccCCCCceEEEEEEEECCCCCCCceeEEEEEecCcHHHHHHHHHHHHHHHhCCCCcEEEEEeE
Confidence            456779999999888765 5788999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCeEEEEEeecCChHHHHHHHHHHHHHHHhcCceeeEEEecCCceeeecCcc
Q 029283           90 GPVPVGETSVFIAVSAVHRADALDACKFLIDELKASVPIWKKEVYSNGEVWKENSEF  146 (196)
Q Consensus        90 G~L~vGE~iV~VaVss~HR~eAF~A~~~iID~lK~~vPIWKkE~~~dG~~Wv~~~~~  146 (196)
                      |.|+|||++|+|+|+|+||++||+||+|+||+||+++||||||+|.||++|+++++.
T Consensus        86 G~l~~Ge~~v~Vav~s~HR~~Af~A~~~~id~lK~~vPIWKkE~~~dG~~Wv~~~~~  142 (150)
T PRK10678         86 GELWPGDEIVFVGVTSAHRSSAFEAGQFIMDYLKTRAPFWKREATPEGDRWVEARDS  142 (150)
T ss_pred             ecccCCCEEEEEEEECCCHHHHHHHHHHHHHHHhhcCCeEEeEEcCCCCEEecCCcc
Confidence            999999999999999999999999999999999999999999999999999997643

>COG0314 MoaE Molybdopterin converting factor, large subunit [Coenzyme metabolism]

Probab=100.00  E-value=3.9e-48  Score=314.86  Aligned_cols=138  Identities=38%  Similarity=0.731  Sum_probs=131.4

Q ss_pred             EEEcccCCCCHHHHHHHhcCCC-ccEEEEEEEEEcCCCCCeeeeEEEEEEehhhHHHHHHHHHHHHHhccCCceEEEEEE
Q 029283           10 EILEENNPVDMTKYMTYVSAPQ-AGAIATFSGTTRDTFDGKIVVELRYESYVSMAIRCIKSICSLARSSWNLHSIAVAHR   88 (196)
Q Consensus        10 ~i~~~~~piDl~~~~~~v~~~~-~GAIv~F~G~VR~~~~G~~V~~L~yEay~~mA~k~L~~I~~ea~~~~~l~~v~I~HR   88 (196)
                      .+.++.+|||++++++.+..+. +|||++|+|+||+.++|++|..|+||+|++||+++|.+|+++++++|++.++.++||
T Consensus         5 ~~~v~~~~~~~~~~i~~~~~~~~~GAivtF~G~VR~~~~G~~v~~L~yEaY~~ma~k~l~~I~~e~~~k~~~~~v~i~Hr   84 (149)
T COG0314           5 RVAVTEEPFDVEELIEALSEPSEAGAIVTFVGIVREENDGRRVEALEYEAYPEMAEKELEEIAAEAKEKWGLLRVAIIHR   84 (149)
T ss_pred             eEEEecCCCCHHHHHHHHhCcccCceEEEEEEEEecCCCCceeeeEEEecCHHHHHHHHHHHHHHHHHhCCceeEEEEEe
Confidence            4455678999999999998877 999999999999999999999999999999999999999999999999999999999


Q ss_pred             eccCCCCCeEEEEEeecCChHHHHHHHHHHHHHHHhcCceeeEEEecCCceeeecCcch
Q 029283           89 LGPVPVGETSVFIAVSAVHRADALDACKFLIDELKASVPIWKKEVYSNGEVWKENSEFM  147 (196)
Q Consensus        89 ~G~L~vGE~iV~VaVss~HR~eAF~A~~~iID~lK~~vPIWKkE~~~dG~~Wv~~~~~~  147 (196)
                      +|.|.|||.+|+|+|+|+||++||+||+|+||+||+++||||+|++.||+.|+..+.-.
T Consensus        85 iG~l~~Ge~~v~v~v~s~HR~~Af~a~~~~id~lK~~aPiWKkE~~~dg~~Wv~~~~~~  143 (149)
T COG0314          85 IGELKIGEAIVLVGVASAHRKEAFEACEYIIDRLKHRAPIWKKEHTEDGERWVGDREHD  143 (149)
T ss_pred             eccccCCCcEEEEEEecccHHHHHHHHHHHHHHHHhhCCceEEEecCCCCeEEeccccc
Confidence            99999999999999999999999999999999999999999999999999999876543

>cd00756 MoaE MoaE family

Probab=100.00  E-value=8.2e-47  Score=298.24  Aligned_cols=124  Identities=45%  Similarity=0.832  Sum_probs=121.4

Q ss_pred             CCHHHHHHHhcCCCccEEEEEEEEEcCCCCCeeeeEEEEEEehhhHHHHHHHHHHHHHhccCCceEEEEEEeccCCCCCe
Q 029283           18 VDMTKYMTYVSAPQAGAIATFSGTTRDTFDGKIVVELRYESYVSMAIRCIKSICSLARSSWNLHSIAVAHRLGPVPVGET   97 (196)
Q Consensus        18 iDl~~~~~~v~~~~~GAIv~F~G~VR~~~~G~~V~~L~yEay~~mA~k~L~~I~~ea~~~~~l~~v~I~HR~G~L~vGE~   97 (196)
                      ||++.+++.+.+|.+||+++|+|+||+.++|++|.+|+||+|++||++.|++|+++++++|++.++.++||+|.|+|||+
T Consensus         1 id~~~~~~~~~~~~~GAiv~F~G~VR~~~~~~~v~~L~ye~y~~ma~~~l~~I~~e~~~k~~~~~v~v~HR~G~l~vGe~   80 (124)
T cd00756           1 FDLAELLAALRDPEAGAVVTFVGTVRDHDEGKGVEALEYEAYPPMAEKELEEIAEEARERWGLLRVAIIHRVGRLPPGEA   80 (124)
T ss_pred             CCHHHHHHhhhCCCCCEEEEEEEEECCCCCCCcEeEEEEEECchHHHHHHHHHHHHHHHhCCCceEEEEEEEcccCCCCE
Confidence            68889999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEEeecCChHHHHHHHHHHHHHHHhcCceeeEEEecCCceee
Q 029283           98 SVFIAVSAVHRADALDACKFLIDELKASVPIWKKEVYSNGEVWK  141 (196)
Q Consensus        98 iV~VaVss~HR~eAF~A~~~iID~lK~~vPIWKkE~~~dG~~Wv  141 (196)
                      +|+|+|+|+||++||+||+|+||+||+++||||+|+|.||+.|+
T Consensus        81 ~v~i~v~a~hR~~af~A~~~~id~lK~~~PiWKkE~~~~~~~Wv  124 (124)
T cd00756          81 IVLVAVSSPHRKEAFEACEFLIDRLKHRAPIWKKEIFEGGEEWV  124 (124)
T ss_pred             EEEEEEecCCHHHHHHHHHHHHHHHHhhCCEEEEEEeCCCCEEC
Confidence            99999999999999999999999999999999999999999996

Members of this family are involved in biosynthesis of the molybdenum cofactor (Moco), an essential cofactor for a diverse group of redox enzymes. Moco biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea and eukaryotes. Moco contains a tricyclic pyranopterin, termed molybdopterin (MPT), which carries the cis-dithiolene group responsible for molybdenum ligation. This dithiolene group is generated by MPT synthase in the second major step in Moco biosynthesis. MPT synthase is a heterotetramer consisting of two large (MoaE) and two small (MoaD) subunits.

>PLN02390 molybdopterin synthase catalytic subunit

Probab=100.00  E-value=2.2e-45  Score=285.94  Aligned_cols=110  Identities=82%  Similarity=1.297  Sum_probs=107.9

Q ss_pred             CCCccEEEEEEEEEcCCCCCeeeeEEEEEEehhhHHHHHHHHHHHHHhccCCceEEEEEEeccCCCCCeEEEEEeecCCh
Q 029283           29 APQAGAIATFSGTTRDTFDGKIVVELRYESYVSMAIRCIKSICSLARSSWNLHSIAVAHRLGPVPVGETSVFIAVSAVHR  108 (196)
Q Consensus        29 ~~~~GAIv~F~G~VR~~~~G~~V~~L~yEay~~mA~k~L~~I~~ea~~~~~l~~v~I~HR~G~L~vGE~iV~VaVss~HR  108 (196)
                      +|++||+++|.|+||+.++|++|..|+||+|+|||++.|++|++++.++|++.++.|+||+|.|+|||++|+|+|+|+||
T Consensus         1 ~~~~GAiv~F~G~VR~~~~g~~V~~L~yeay~~ma~~~l~~I~~e~~~~~~~~~v~i~HR~G~l~vge~~v~v~v~s~HR   80 (111)
T PLN02390          1 DPQAGAIATFSGTTRDTFEGKTVLELRYEAYVPMALRELRKICDEARSRWSLHKIAVAHRLGPVPVGETSVFVAVSSVHR   80 (111)
T ss_pred             CCCceEEEEEEEEECCCCCCCcEeeEEEEEcHHHHHHHHHHHHHHHHHhCCCceEEEEEeeecccCCCEEEEEEEECCCH
Confidence            47899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCceeeEEEecCCc
Q 029283          109 ADALDACKFLIDELKASVPIWKKEVYSNGE  138 (196)
Q Consensus       109 ~eAF~A~~~iID~lK~~vPIWKkE~~~dG~  138 (196)
                      ++||+||+|+||+||+++||||||+|.||+
T Consensus        81 ~~Af~A~~~~id~lK~~vPIWKkE~~~dG~  110 (111)
T PLN02390         81 ADALDACKFLIDELKASVPIWKKEVYDDGE  110 (111)
T ss_pred             HHHHHHHHHHHHHHhhcCCEEEeeecCCCC
Confidence            999999999999999999999999999986

>KOG3307 consensus Molybdopterin converting factor subunit 2 [Coenzyme transport and metabolism]

Probab=100.00  E-value=1.6e-45  Score=292.38  Aligned_cols=150  Identities=52%  Similarity=0.802  Sum_probs=142.5

Q ss_pred             CCCcccceEEEEcccCCCCHHHHHHHhcCCCccEEEEEEEEEcCCCCCeeeeEEEEEEehhhHHHHHHHHHHHHHhccCC
Q 029283            1 MAGEDRTLVEILEENNPVDMTKYMTYVSAPQAGAIATFSGTTRDTFDGKIVVELRYESYVSMAIRCIKSICSLARSSWNL   80 (196)
Q Consensus         1 ~~~~~~~~v~i~~~~~piDl~~~~~~v~~~~~GAIv~F~G~VR~~~~G~~V~~L~yEay~~mA~k~L~~I~~ea~~~~~l   80 (196)
                      |..+++++++|+.  +-++++.+-+.+++|.+|||.+|+|++|+.++|+.|..|+||+|.|||.+.|+.|+.++++.|++
T Consensus         1 ~~~~~k~~I~~~~--E~~~VdvV~qlVs~P~cGAIstF~GtTRdnfeGk~V~~L~Yeay~pMA~~~lr~IC~~iR~~wpv   78 (150)
T KOG3307|consen    1 MSAEEKNLIEILE--EGHKVDVVDQLVSHPSCGAISTFNGTTRDNFEGKDVSNLSYEAYDPMAYKKLRGICAEIRAEWPV   78 (150)
T ss_pred             CchhhhhHHHHHH--hccchhHHHHHhcCCcccceeeeccccccccCCceeeeeehhhhcHHHHHHHHHHHHHHHhhCch
Confidence            5678888888865  67777777788999999999999999999999999999999999999999999999999999999


Q ss_pred             ceEEEEEEeccCCCCCeEEEEEeecCChHHHHHHHHHHHHHHHhcCceeeEEEecCCceeeecCcchhhhhc
Q 029283           81 HSIAVAHRLGPVPVGETSVFIAVSAVHRADALDACKFLIDELKASVPIWKKEVYSNGEVWKENSEFMERRLD  152 (196)
Q Consensus        81 ~~v~I~HR~G~L~vGE~iV~VaVss~HR~eAF~A~~~iID~lK~~vPIWKkE~~~dG~~Wv~~~~~~~~~~~  152 (196)
                      .++++.||+|.+++||.+|+|+|||+||..+++||+++||.||..+||||||.|+.++.|++|.+|+.+|++
T Consensus        79 kkIAvfHRLG~VpvgEsSviIavSS~HRa~~l~A~~~~ID~LKa~vPIwKkE~Ye~~~vWK~N~E~~~~~~~  150 (150)
T KOG3307|consen   79 KKIAVFHRLGKVPVGESSVIIAVSSPHRATALQATEKCIDLLKAHVPIWKKEEYEVDGVWKSNIEDSKQRLE  150 (150)
T ss_pred             hhhhhhhhccCcccCcceEEEEecChhhHHHHHHHHHHHHHHHhcCCcccceeeecCccccccHHHHHhhcC
Confidence            999999999999999999999999999999999999999999999999999999999999999999998864

>PRK14493 putative bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MobB/MoaE; Provisional

Probab=100.00  E-value=6e-41  Score=294.14  Aligned_cols=131  Identities=33%  Similarity=0.465  Sum_probs=122.9

Q ss_pred             ccCCCCHHHHHHHhcC----CCccEEEEEEEEEc--CCCCCeeeeEEEEEEehhhHHHHHHHHHHHHHhccCCceEEEEE
Q 029283           14 ENNPVDMTKYMTYVSA----PQAGAIATFSGTTR--DTFDGKIVVELRYESYVSMAIRCIKSICSLARSSWNLHSIAVAH   87 (196)
Q Consensus        14 ~~~piDl~~~~~~v~~----~~~GAIv~F~G~VR--~~~~G~~V~~L~yEay~~mA~k~L~~I~~ea~~~~~l~~v~I~H   87 (196)
                      +++|||++.+++.+..    +.+||+++|.|+||  +.++|+.|+.|+|++|++||+++|++|+++++++|++.++.++|
T Consensus       137 ~~~~l~~~~li~~~~~~~~~~~~GAi~~F~G~VR~r~~~~g~~v~~L~ye~y~~~A~~~l~~I~~e~~~~~~~~~v~v~H  216 (274)
T PRK14493        137 QPPYVTLESLVAKVKRSPDADKAGAIATFTGRVRAKEDADDEPTEYLEFEKYDGVADERMAAIREELKQRDGVFEVLLHH  216 (274)
T ss_pred             cCCCCCHHHHHHHHhccCCCCCCcEEEEEEeEEEccccCCCCcEEEEEEEeCCHHHHHHHHHHHHHHHHhCCCceEEEEE
Confidence            4567889888888764    45699999999999  66678999999999999999999999999999999999999999


Q ss_pred             EeccCCCCCeEEEEEeecCChHHHHHHHHHHHHHHHhcCceeeEEEecCCceeeecC
Q 029283           88 RLGPVPVGETSVFIAVSAVHRADALDACKFLIDELKASVPIWKKEVYSNGEVWKENS  144 (196)
Q Consensus        88 R~G~L~vGE~iV~VaVss~HR~eAF~A~~~iID~lK~~vPIWKkE~~~dG~~Wv~~~  144 (196)
                      |+|.|+|||+||+|+|+|+||++||+||+|+||+||+++||||||+|.||+.|++..
T Consensus       217 r~G~l~vge~~v~v~v~a~hR~~af~a~~~~id~lK~~~piwK~e~~~~g~~Wv~~~  273 (274)
T PRK14493        217 RTGVIEAGEDIVFVVVLAGHRQEAFRAVSDGIDRLKDEVPIFKKEVTVDEEFWVHDR  273 (274)
T ss_pred             eeccccCCCeEEEEEEecCCHHHHHHHHHHHHHHHhhcCCeEEEEEcCCCCEeecCC
Confidence            999999999999999999999999999999999999999999999999999999875

>PF02391 MoaE: MoaE protein; InterPro: IPR003448 This family contains the MoaE protein that is involved in biosynthesis of molybdopterin []

Probab=100.00  E-value=6.7e-40  Score=255.74  Aligned_cols=116  Identities=39%  Similarity=0.692  Sum_probs=105.6

Q ss_pred             EEcccCCCCHHHHHHHhcCCCccEEEEEEEEEcCCCCCeeeeEEEEEEehhhHHHHHHHHHHHHHhccCCceEEEEEEec
Q 029283           11 ILEENNPVDMTKYMTYVSAPQAGAIATFSGTTRDTFDGKIVVELRYESYVSMAIRCIKSICSLARSSWNLHSIAVAHRLG   90 (196)
Q Consensus        11 i~~~~~piDl~~~~~~v~~~~~GAIv~F~G~VR~~~~G~~V~~L~yEay~~mA~k~L~~I~~ea~~~~~l~~v~I~HR~G   90 (196)
                      |.++.+|||+++++++++++.+||+++|+|+||+.++|++|+.|+|++|++||++.|++|+++++++|++..+.|+||+|
T Consensus         2 v~i~~~~i~~~~~~~~~~~~~~Gai~~F~G~VR~~~~~~~v~~L~ye~y~~ma~~~l~~I~~e~~~~~~~~~v~i~HR~G   81 (117)
T PF02391_consen    2 VRITEEPIDVDELIEKVRDPEAGAIVIFNGIVRNHSDGKKVEALEYEAYEEMAEKELEEIAEEARERFGIVDVAIVHRVG   81 (117)
T ss_dssp             EEEESS---HHHHHHHHCHTTT-EEEEEEEE--CCCTCCCEEEEEEEE-HHHHHHHHHHHHHHHHHHSTTCEEEEEEEEE
T ss_pred             EEEEcCCCCHHHHHHHhcCCCCceEEEEEEEECCCCCCccEEEEEEEEccHHHHHHHHHHHHHHHHhCCCeEEEEEEeeC
Confidence            45678999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCeEEEEEeecCChHHHHHHHHHHHHHHHhcC
Q 029283           91 PVPVGETSVFIAVSAVHRADALDACKFLIDELKASV  126 (196)
Q Consensus        91 ~L~vGE~iV~VaVss~HR~eAF~A~~~iID~lK~~v  126 (196)
                      .|+|||++|+|+|+|+||++||+||+|+||+||++|
T Consensus        82 ~l~vGe~~v~V~vsa~hR~eaf~A~~~~id~iK~~V  117 (117)
T PF02391_consen   82 RLKVGEPIVLVAVSAPHRKEAFEACEYIIDRIKKEV  117 (117)
T ss_dssp             EEETTSEEEEEEEEESSHHHHHHHHHHHHHHHHHHS
T ss_pred             CCCCCCeEEEEEEecCCHHHHHHHHHHHHHHHhhcC
Confidence            999999999999999999999999999999999986

Molybdopterin, the universal component of the pterin molybdenum cofactors, contains a dithiolene group serving to bind Mo. Addition of the dithiolene sulphurs to a molybdopterin precursor requires the activity of the converting factor. Converting factor contains the MoaE and MoaD proteins.; GO: 0006777 Mo-molybdopterin cofactor biosynthetic process; PDB: 2WP4_B 2OMD_B 1NVJ_E 1FM0_E 3BII_E 1NVI_E 1FMA_E 2QIE_K 2Q5W_E 3RPF_A ....

>PRK11538 ribosome-associated protein; Provisional

Probab=83.45  E-value=11  Score=29.16  Aligned_cols=74  Identities=11%  Similarity=0.172  Sum_probs=49.5

Q ss_pred             HHHHHHHHHHHhccCCceEEEEEEeccCCCCCeEEEEEeecCChHHHHHHHHHHHHHHHhc-CceeeEEEecCCceee
Q 029283           65 RCIKSICSLARSSWNLHSIAVAHRLGPVPVGETSVFIAVSAVHRADALDACKFLIDELKAS-VPIWKKEVYSNGEVWK  141 (196)
Q Consensus        65 k~L~~I~~ea~~~~~l~~v~I~HR~G~L~vGE~iV~VaVss~HR~eAF~A~~~iID~lK~~-vPIWKkE~~~dG~~Wv  141 (196)
                      +++.+++-++...-...++.++.--|.-..-|  .+|.+++......-..++++.+.+|.. .+....| ..+++.|+
T Consensus         4 ~~~~~~i~~~l~dkKa~DI~vlDv~~~~~~~D--y~VIatg~S~rh~~aia~~v~~~~k~~~~~~~~~e-G~~~~~Wi   78 (105)
T PRK11538          4 KALQDFVIDKIDDLKGQDIIALDVQGKSSITD--CMIICTGTSSRHVMSIADHVVQESRAAGLLPLGVE-GENAADWI   78 (105)
T ss_pred             HHHHHHHHHHHHHcCCCCeEEEECCCCCcccC--EEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCCccc-CCCCCCEE
Confidence            44555555555555677888877677767776  667777788888888899999999864 3333444 12234786

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	196
4ap8_A	135	Crystal Structure Of Human Molybdopterin Synthase C		7e-29
2wp4_A	147	Crystal Structure Of Rv3119 From Mycobacterium Tube		3e-21
2qie_A	148	Staphylococcus Aureus Molybdopterin Synthase In Com		7e-19
2q5w_E	149	The X-Ray Crystal Structure Of Molybdopterin Syntha		7e-19
1fm0_E	150	Molybdopterin Synthase (MoadMOAE) Length = 150		2e-17
3bii_E	149	Crystal Structure Of Activated Mpt Synthase Length		2e-17
1nvj_A	140	Deletion Mutant (Delta 141) Of Molybdopterin Syntha		4e-17
2omd_A	154	Crystal Structure Of Molybdopterin Converting Facto		3e-15
3rpf_A	148	Protein-Protein Complex Of Subunit 1 And 2 Of Molyb		7e-04

>pdb|4AP8|A Chain A, Crystal Structure Of Human Molybdopterin Synthase Catalytic Subunit (Mocs2b) Length = 135

Iteration: 1
 Score =  123 bits (308), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 59/108 (54%), Positives = 75/108 (69%)
Query: 27  VSAPQAGAIATFSGTTRDTFDGKIVVELRYESYVSMAIRCIKSICSLARSSWNLHSIAVA 86
           V +P  GAI+ F GTTR+ F+GK V+ L YE+Y+ MA   ++ ICS  R  W +  IAV 
Sbjct: 26  VISPLCGAISLFVGTTRNNFEGKKVISLEYEAYLPMAENEVRKICSDIRQKWPVKHIAVF 85
Query: 87  HRLGPVPVGETSVFIAVSAVHRADALDACKFLIDELKASVPIWKKEVY 134
           HRLG VPV E S+ IAVS+ HRA +L+A  + ID LKA VPIWKKE+Y
Sbjct: 86  HRLGLVPVSEASIIIAVSSAHRAASLEAVSYAIDTLKAKVPIWKKEIY 133

>pdb|2WP4|A Chain A, Crystal Structure Of Rv3119 From Mycobacterium Tuberculosis Length = 147

Iteration: 1
 Score = 98.2 bits (243), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 51/126 (40%), Positives = 67/126 (53%)
Query: 15  NNPVDMTKYMTYVSAPQAGAIATFSGTTRDTFDGKIVVELRYESYVSMAIRCIKSICSLA 74
           + P+ + + +  VS P+ G I  F G  RD   G  V  L YE+Y  M IR + SI    
Sbjct: 17  DQPLSVDEVLAAVSGPEQGGIVIFVGNVRDHNAGHDVTRLFYEAYPPMVIRTLMSIIGRC 76
Query: 75  RSSWNLHSIAVAHRLGPVPVGETSVFIAVSAVHRADALDACKFLIDELKASVPIWKKEVY 134
                   +AVAHR G + +G+ +V I  SA HRA+A DA +  I+ LK  VPIWKKE  
Sbjct: 77  EDKAEGVRVAVAHRTGELQIGDAAVVIGASAPHRAEAFDAARMCIELLKQEVPIWKKEFS 136
Query: 135 SNGEVW 140
           S G  W
Sbjct: 137 STGAEW 142

>pdb|2QIE|A Chain A, Staphylococcus Aureus Molybdopterin Synthase In Complex With Precursor Z Length = 148

Iteration: 1
 Score = 90.1 bits (222), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 67/126 (53%)
Query: 16  NPVDMTKYMTYVSAPQAGAIATFSGTTRDTFDGKIVVELRYESYVSMAIRCIKSICSLAR 75
            P+   +Y  +      GA+  F+G  R+   G     L YE+Y+ MA + +  I     
Sbjct: 9   EPIQTEQYREFTINEYQGAVVVFTGHVREWTKGVKTEYLEYEAYIPMAEKKLAQIGDEIN 68
Query: 76  SSWNLHSIAVAHRLGPVPVGETSVFIAVSAVHRADALDACKFLIDELKASVPIWKKEVYS 135
             W     ++ HR+GP+ + + +V IAVS+ HR DA  A ++ I+ +K  VPIWKKE++ 
Sbjct: 69  EKWPGTITSIVHRIGPLQISDIAVLIAVSSPHRKDAYRANEYAIERIKEIVPIWKKEIWE 128
Query: 136 NGEVWK 141
           +G  W+
Sbjct: 129 DGSKWQ 134

>pdb|2Q5W|E Chain E, The X-Ray Crystal Structure Of Molybdopterin Synthase From Staphylococcus Aureus Length = 149

Iteration: 1
 Score = 90.1 bits (222), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 41/125 (32%), Positives = 67/125 (53%)
Query: 17  PVDMTKYMTYVSAPQAGAIATFSGTTRDTFDGKIVVELRYESYVSMAIRCIKSICSLARS 76
           P+   +Y  +      GA+  F+G  R+   G     L YE+Y+ MA + +  I      
Sbjct: 11  PIQTEQYREFTINEYQGAVVVFTGHVREWTKGVKTEYLEYEAYIPMAEKKLAQIGDEINE 70
Query: 77  SWNLHSIAVAHRLGPVPVGETSVFIAVSAVHRADALDACKFLIDELKASVPIWKKEVYSN 136
            W     ++ HR+GP+ + + +V IAVS+ HR DA  A ++ I+ +K  VPIWKKE++ +
Sbjct: 71  KWPGTITSIVHRIGPLQISDIAVLIAVSSPHRKDAYRANEYAIERIKEIVPIWKKEIWED 130
Query: 137 GEVWK 141
           G  W+
Sbjct: 131 GSKWQ 135

>pdb|1FM0|E Chain E, Molybdopterin Synthase (MoadMOAE) Length = 150

Iteration: 1
 Score = 85.1 bits (209), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 41/113 (36%), Positives = 61/113 (53%)
Query: 33  GAIATFSGTTRDTFDGKIVVELRYESYVSMAIRCIKSICSLARSSWNLHSIAVAHRLGPV 92
           GA+ TF+G  R+   G  V  L  E Y  M  + +  I   AR+ W L  + V HR+G +
Sbjct: 29  GAVVTFTGKVRNHNLGDSVNALTLEHYPGMTEKALAEIVDEARNRWPLGRVTVIHRIGEL 88
Query: 93  PVGETSVFIAVSAVHRADALDACKFLIDELKASVPIWKKEVYSNGEVWKENSE 145
             G+  VF+ V++ HR+ A +A +F++D LK   P WK+E    G+ W E  E
Sbjct: 89  WPGDEIVFVGVTSAHRSSAFEAGQFIMDYLKTRAPFWKREATPEGDRWVEARE 141

>pdb|3BII|E Chain E, Crystal Structure Of Activated Mpt Synthase Length = 149

Iteration: 1
 Score = 85.1 bits (209), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 41/113 (36%), Positives = 61/113 (53%)
Query: 33  GAIATFSGTTRDTFDGKIVVELRYESYVSMAIRCIKSICSLARSSWNLHSIAVAHRLGPV 92
           GA+ TF+G  R+   G  V  L  E Y  M  + +  I   AR+ W L  + V HR+G +
Sbjct: 28  GAVVTFTGKVRNHNLGDSVNALTLEHYPGMTEKALAEIVDEARNRWPLGRVTVIHRIGEL 87
Query: 93  PVGETSVFIAVSAVHRADALDACKFLIDELKASVPIWKKEVYSNGEVWKENSE 145
             G+  VF+ V++ HR+ A +A +F++D LK   P WK+E    G+ W E  E
Sbjct: 88  WPGDEIVFVGVTSAHRSSAFEAGQFIMDYLKTRAPFWKREATPEGDRWVEARE 140

>pdb|1NVJ|A Chain A, Deletion Mutant (Delta 141) Of Molybdopterin Synthase Length = 140

Iteration: 1
 Score = 84.3 bits (207), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 40/110 (36%), Positives = 60/110 (54%)
Query: 33  GAIATFSGTTRDTFDGKIVVELRYESYVSMAIRCIKSICSLARSSWNLHSIAVAHRLGPV 92
           GA+ TF+G  R+   G  V  L  E Y  M  + +  I   AR+ W L  + V HR+G +
Sbjct: 29  GAVVTFTGKVRNHNLGDSVNALTLEHYPGMTEKALAEIVDEARNRWPLGRVTVIHRIGEL 88
Query: 93  PVGETSVFIAVSAVHRADALDACKFLIDELKASVPIWKKEVYSNGEVWKE 142
             G+  VF+ V++ HR+ A +A +F++D LK   P WK+E    G+ W E
Sbjct: 89  WPGDEIVFVGVTSAHRSSAFEAGQFIMDYLKTRAPFWKREATPEGDRWVE 138

>pdb|2OMD|A Chain A, Crystal Structure Of Molybdopterin Converting Factor Subunit 2 (Aq_2181) From Aquifex Aeolicus Vf5 Length = 154

Iteration: 1
 Score = 78.2 bits (191), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 38/106 (35%), Positives = 56/106 (52%), Gaps = 1/106 (0%)
Query: 33  GAIATFSGTTRDT-FDGKIVVELRYESYVSMAIRCIKSICSLARSSWNLHSIAVAHRLGP 91
           GA   F G  R+   DG  +  L YE+Y  MAI+ ++ I       + +  + + HRLG 
Sbjct: 32  GAQVLFLGIPRNAPEDGGNIEALEYEAYPEMAIKEMEKIRQETIEKFGVKEVFIHHRLGL 91
Query: 92  VPVGETSVFIAVSAVHRADALDACKFLIDELKASVPIWKKEVYSNG 137
           V +GE S  +     HR +   AC++ +DE K  VPIWKKE++  G
Sbjct: 92  VKIGEPSFLVLAVGGHREETFKACRYAVDETKKRVPIWKKEIFKEG 137

>pdb|3RPF|A Chain A, Protein-Protein Complex Of Subunit 1 And 2 Of Molybdopterin-Converting Factor From Helicobacter Pylori 26695 Length = 148

Iteration: 1
 Score = 40.4 bits (93), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 83  IAVAHRLGPVPVGETSVFIAVSAVHRADALDACKFLIDELKASVPIWKKEVYSNGEVW-K 141
           +  AH LG V +G++S        +R +AL+  +  I++ K + PIWK ++  N  ++ K
Sbjct: 76  LKXAHSLGDVLIGQSSFLCVSXGKNRKNALELYENFIEDFKHNAPIWKYDLIHNKRIYAK 135
Query: 142 ENSE 145
           E S 
Sbjct: 136 ERSH 139

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	196
2wp4_A	147	Molybdopterin-converting factor subunit 2 1; trans	2e-61
2q5w_E	149	Molybdopterin-converting factor subunit 2; MOCO, M	8e-60
1fm0_E	150	Molybdopterin convertin factor, subunit 2; molybde	8e-57
2omd_A	154	Molybdopterin-converting factor subunit 2; MOAE, c	3e-54
3rpf_A	148	Molybdopterin synthase catalytic subunit; MCSG, PS	6e-50

>2wp4_A Molybdopterin-converting factor subunit 2 1; transferase; 2.49A {Mycobacterium tuberculosis} Length = 147

 Score =  186 bits (475), Expect = 2e-61
 Identities = 52/143 (36%), Positives = 72/143 (50%), Gaps = 2/143 (1%)

Query: 1   MAGEDRTLVEILEENNPVDMTKYMTYVSAPQAGAIATFSGTTRDTFDGKIVVELRYESYV 60
           +A        + ++  P+ + + +  VS P+ G I  F G  RD   G  V  L YE+Y 
Sbjct: 5   VAEGAYPYCRLTDQ--PLSVDEVLAAVSGPEQGGIVIFVGNVRDHNAGHDVTRLFYEAYP 62

Query: 61  SMAIRCIKSICSLARSSWNLHSIAVAHRLGPVPVGETSVFIAVSAVHRADALDACKFLID 120
            M IR + SI            +AVAHR G + +G+ +V I  SA HRA+A DA +  I+
Sbjct: 63  PMVIRTLMSIIGRCEDKAEGVRVAVAHRTGELQIGDAAVVIGASAPHRAEAFDAARMCIE 122

Query: 121 ELKASVPIWKKEVYSNGEVWKEN 143
            LK  VPIWKKE  S G  W  +
Sbjct: 123 LLKQEVPIWKKEFSSTGAEWVGD 145

>2q5w_E Molybdopterin-converting factor subunit 2; MOCO, MPT synthase, MOAD, MOAE, transferase, molybdenum cofactor biosynthesis; 2.00A {Staphylococcus aureus} PDB: 2qie_A* Length = 149

 Score =  182 bits (465), Expect = 8e-60
 Identities = 44/137 (32%), Positives = 73/137 (53%), Gaps = 2/137 (1%)

Query: 9   VEILEENNPVDMTKYMTYVSAPQAGAIATFSGTTRDTFDGKIVVELRYESYVSMAIRCIK 68
            EI+ E  P+   +Y  +      GA+  F+G  R+   G     L YE+Y+ MA + + 
Sbjct: 5   FEIVIE--PIQTEQYREFTINEYQGAVVVFTGHVREWTKGVKTEYLEYEAYIPMAEKKLA 62

Query: 69  SICSLARSSWNLHSIAVAHRLGPVPVGETSVFIAVSAVHRADALDACKFLIDELKASVPI 128
            I       W     ++ HR+GP+ + + +V IAVS+ HR DA  A ++ I+ +K  VPI
Sbjct: 63  QIGDEINEKWPGTITSIVHRIGPLQISDIAVLIAVSSPHRKDAYRANEYAIERIKEIVPI 122

Query: 129 WKKEVYSNGEVWKENSE 145
           WKKE++ +G  W+ + +
Sbjct: 123 WKKEIWEDGSKWQGHQK 139

>1fm0_E Molybdopterin convertin factor, subunit 2; molybdenum cofactor biosynthesis, transferase; 1.45A {Escherichia coli} SCOP: d.41.5.1 PDB: 1fma_E 1nvi_E 3bii_E 1nvj_A Length = 150

 Score =  175 bits (446), Expect = 8e-57
 Identities = 44/142 (30%), Positives = 70/142 (49%), Gaps = 3/142 (2%)

Query: 5   DRTLVEILEENNPVDMTK-YMTYVSAPQAGAIATFSGTTRDTFDGKIVVELRYESYVSMA 63
             T + +  +  P  + + Y       + GA+ TF+G  R+   G  V  L  E Y  M 
Sbjct: 2   AETKIVVGPQ--PFSVGEEYPWLAERDEDGAVVTFTGKVRNHNLGDSVNALTLEHYPGMT 59

Query: 64  IRCIKSICSLARSSWNLHSIAVAHRLGPVPVGETSVFIAVSAVHRADALDACKFLIDELK 123
            + +  I   AR+ W L  + V HR+G +  G+  VF+ V++ HR+ A +A +F++D LK
Sbjct: 60  EKALAEIVDEARNRWPLGRVTVIHRIGELWPGDEIVFVGVTSAHRSSAFEAGQFIMDYLK 119

Query: 124 ASVPIWKKEVYSNGEVWKENSE 145
              P WK+E    G+ W E  E
Sbjct: 120 TRAPFWKREATPEGDRWVEARE 141

>2omd_A Molybdopterin-converting factor subunit 2; MOAE, coenzyme biosynthesis, structural genomics, NPPSFA; 2.00A {Aquifex aeolicus} Length = 154

 Score =  169 bits (429), Expect = 3e-54
 Identities = 43/148 (29%), Positives = 68/148 (45%), Gaps = 5/148 (3%)

Query: 1   MAGEDRTLVEILEENNPVDMTKYMTYVSAPQ-AGAIATFSGTTRDTF-DGKIVVELRYES 58
           M       V +  E       + ++    P+  GA   F G  R+   DG  +  L YE+
Sbjct: 1   MEVGMIPRVYLGHE--WFGAERILSEYQVPEDCGAQVLFLGIPRNAPEDGGNIEALEYEA 58

Query: 59  YVSMAIRCIKSICSLARSSWNLHSIAVAHRLGPVPVGETSVFIAVSAVHRADALDACKFL 118
           Y  MAI+ ++ I       + +  + + HRLG V +GE S  +     HR +   AC++ 
Sbjct: 59  YPEMAIKEMEKIRQETIEKFGVKEVFIHHRLGLVKIGEPSFLVLAVGGHREETFKACRYA 118

Query: 119 IDELKASVPIWKKEVYSNGEV-WKENSE 145
           +DE K  VPIWKKE++  G+  W    +
Sbjct: 119 VDETKKRVPIWKKEIFKEGKGEWVLGEK 146

>3rpf_A Molybdopterin synthase catalytic subunit; MCSG, PSI-biology, structural genomics, midwest center for S genomics, transferase; 1.90A {Helicobacter pylori} Length = 148

 Score =  157 bits (400), Expect = 6e-50
 Identities = 28/141 (19%), Positives = 60/141 (42%), Gaps = 7/141 (4%)

Query: 7   TLVEILEENNPVD--MTKYMTYVSAPQAGAIATFSGTTRDTFDGKIVVELRYESYVSMAI 64
            +++I++        +  Y     A   GA   F G  R   +   +  L ++ Y ++  
Sbjct: 3   AVLKIIQGALDTRELLKAYQEEACAKNFGAFCVFVGIVRKEDN---IQGLSFDIYEALLK 59

Query: 65  RCIKSICSLARSSWNLHSIAVAHRLGPVPVGETSVFIAVSAVHRADALDACKFLIDELKA 124
              +     A+    +  + +AH LG V +G++S        +R +AL+  +  I++ K 
Sbjct: 60  TWFEKWHHKAKDLGVV--LKMAHSLGDVLIGQSSFLCVSMGKNRKNALELYENFIEDFKH 117

Query: 125 SVPIWKKEVYSNGEVWKENSE 145
           + PIWK ++  N  ++ +   
Sbjct: 118 NAPIWKYDLIHNKRIYAKERS 138

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	196
1fm0_E	150	Molybdopterin convertin factor, subunit 2; molybde	100.0
2wp4_A	147	Molybdopterin-converting factor subunit 2 1; trans	100.0
2q5w_E	149	Molybdopterin-converting factor subunit 2; MOCO, M	100.0
2omd_A	154	Molybdopterin-converting factor subunit 2; MOAE, c	100.0
4ap8_A	135	Molybdopterin synthase catalytic subunit; transfer	100.0
3rpf_A	148	Molybdopterin synthase catalytic subunit; MCSG, PS	100.0

>1fm0_E Molybdopterin convertin factor, subunit 2; molybdenum cofactor biosynthesis, transferase; 1.45A {Escherichia coli} SCOP: d.41.5.1 PDB: 1fma_E 1nvi_E 3bii_E 1nvj_A

Probab=100.00  E-value=9.6e-51  Score=328.80  Aligned_cols=141  Identities=30%  Similarity=0.586  Sum_probs=126.8

Q ss_pred             EEEcccCCCCHHHHHHHhc-CCCccEEEEEEEEEcCCCCCeeeeEEEEEEehhhHHHHHHHHHHHHHhccCCceEEEEEE
Q 029283           10 EILEENNPVDMTKYMTYVS-APQAGAIATFSGTTRDTFDGKIVVELRYESYVSMAIRCIKSICSLARSSWNLHSIAVAHR   88 (196)
Q Consensus        10 ~i~~~~~piDl~~~~~~v~-~~~~GAIv~F~G~VR~~~~G~~V~~L~yEay~~mA~k~L~~I~~ea~~~~~l~~v~I~HR   88 (196)
                      .+.++.+|||++++++.+. ++++||+++|+|+||+.++|++|.+|+||+|++||++.|++|+++++++|++.++.|+||
T Consensus         5 ~v~i~~~~~d~~~~~~~~~~~~~~GAvv~F~G~VR~~~~g~~V~~L~ye~Y~~ma~~~l~~I~~ea~~r~~~~~v~v~HR   84 (150)
T 1fm0_E            5 KIVVGPQPFSVGEEYPWLAERDEDGAVVTFTGKVRNHNLGDSVNALTLEHYPGMTEKALAEIVDEARNRWPLGRVTVIHR   84 (150)
T ss_dssp             EEEEESSCCCHHHHHHHHTCCTTCCEEEEEEEECC-------CCCEEEEECHHHHHHHHHHHHHHHHHHSCEEEEEEEEE
T ss_pred             EEEEEcCCCCHHHHHHHHhcCCCCceEEEEEEEECCCCCCCcEeEEEEEecchHHHHHHHHHHHHHHHhCCCceEEEEEE
Confidence            4556779999999999886 589999999999999999999999999999999999999999999999999999999999


Q ss_pred             eccCCCCCeEEEEEeecCChHHHHHHHHHHHHHHHhcCceeeEEEecCCceeeecCcchhhh
Q 029283           89 LGPVPVGETSVFIAVSAVHRADALDACKFLIDELKASVPIWKKEVYSNGEVWKENSEFMERR  150 (196)
Q Consensus        89 ~G~L~vGE~iV~VaVss~HR~eAF~A~~~iID~lK~~vPIWKkE~~~dG~~Wv~~~~~~~~~  150 (196)
                      +|.|+|||+||+|+|+|+||++||+||+|+||+||+++||||||+|.||+.||++++..+..
T Consensus        85 ~G~l~vGe~~v~VaVss~HR~~Af~A~~~~iD~lK~~aPiWKkE~~~dG~~Wv~~~~~d~~~  146 (150)
T 1fm0_E           85 IGELWPGDEIVFVGVTSAHRSSAFEAGQFIMDYLKTRAPFWKREATPEGDRWVEARESDQQA  146 (150)
T ss_dssp             CEEECTTCEEEEEEEEESSHHHHHHHHHHHHHHHHHHSCEEEEEEETTEEEECCCCHHHHHH
T ss_pred             EcccCCCCEEEEEEEEcCcHHHHHHHHHHHHHHHHhcCCEEEEEEcCCCCEecCCCcCchhh
Confidence            99999999999999999999999999999999999999999999999999999998755543

>2wp4_A Molybdopterin-converting factor subunit 2 1; transferase; 2.49A {Mycobacterium tuberculosis}

Probab=100.00  E-value=9.5e-51  Score=328.00  Aligned_cols=134  Identities=38%  Similarity=0.608  Sum_probs=115.2

Q ss_pred             EEcccCCCCHHHHHHHhcCCCccEEEEEEEEEcCCCCCeeeeEEEEEEehhhHHHHHHHHHHHHHhccCCceEEEEEEec
Q 029283           11 ILEENNPVDMTKYMTYVSAPQAGAIATFSGTTRDTFDGKIVVELRYESYVSMAIRCIKSICSLARSSWNLHSIAVAHRLG   90 (196)
Q Consensus        11 i~~~~~piDl~~~~~~v~~~~~GAIv~F~G~VR~~~~G~~V~~L~yEay~~mA~k~L~~I~~ea~~~~~l~~v~I~HR~G   90 (196)
                      +.++.+|||++++++.++++++||+++|+|+||+.++|++|.+|+||+|++||++.|++|+++++++|++.++.|+||+|
T Consensus        13 ~~i~~~~~d~~~~~~~~~~~~~GAvv~F~G~VR~~~~g~~V~~Leye~y~~ma~~~l~~I~~ea~~r~~~~~v~i~HR~G   92 (147)
T 2wp4_A           13 CRLTDQPLSVDEVLAAVSGPEQGGIVIFVGNVRDHNAGHDVTRLFYEAYPPMVIRTLMSIIGRCEDKAEGVRVAVAHRTG   92 (147)
T ss_dssp             EEEESSCCCHHHHHHHHCCTTCCEEEEEEEECCC-------CEEEEECCHHHHHHHHHHHHHHHHTSSTTCEEEEEEECE
T ss_pred             EEEEcCCCCHHHHHHHhhCCCCceEEEEEEEECCCCCCCcEEEEEEEeCchHHHHHHHHHHHHHHHhCCCceEEEEEEEc
Confidence            44567999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCeEEEEEeecCChHHHHHHHHHHHHHHHhcCceeeEEEecCCceeeecC
Q 029283           91 PVPVGETSVFIAVSAVHRADALDACKFLIDELKASVPIWKKEVYSNGEVWKENS  144 (196)
Q Consensus        91 ~L~vGE~iV~VaVss~HR~eAF~A~~~iID~lK~~vPIWKkE~~~dG~~Wv~~~  144 (196)
                      .|+|||+||+|+|+|+||++||+||+|+||+||+++||||||+|.||+.||++.
T Consensus        93 ~l~vGe~~v~VaVss~HR~~Af~A~~~~iD~lK~~aPiWKkE~~~dG~~Wv~~~  146 (147)
T 2wp4_A           93 ELQIGDAAVVIGASAPHRAEAFDAARMCIELLKQEVPIWKKEFSSTGAEWVGDR  146 (147)
T ss_dssp             EECTTCEEEEEEEEESSHHHHHHHHHHHHHHHHHHCCCEEEEECC---------
T ss_pred             ccCCCCeEEEEEEeccCHHHHHHHHHHHHHHHHhhCCEEEEEEeCCCCEEeCCC
Confidence            999999999999999999999999999999999999999999999999999864

>2q5w_E Molybdopterin-converting factor subunit 2; MOCO, MPT synthase, MOAD, MOAE, transferase, molybdenum cofactor biosynthesis; 2.00A {Staphylococcus aureus} PDB: 2qie_A*

Probab=100.00  E-value=1.9e-50  Score=326.86  Aligned_cols=135  Identities=30%  Similarity=0.596  Sum_probs=129.0

Q ss_pred             EEcccCCCCHHHHHHHhcCCCccEEEEEEEEEcCCCCCeeeeEEEEEEehhhHHHHHHHHHHHHHhccCCceEEEEEEec
Q 029283           11 ILEENNPVDMTKYMTYVSAPQAGAIATFSGTTRDTFDGKIVVELRYESYVSMAIRCIKSICSLARSSWNLHSIAVAHRLG   90 (196)
Q Consensus        11 i~~~~~piDl~~~~~~v~~~~~GAIv~F~G~VR~~~~G~~V~~L~yEay~~mA~k~L~~I~~ea~~~~~l~~v~I~HR~G   90 (196)
                      +.++.+|||++++++.++++++||+++|+|+||+.++|++|.+|+||+|++||++.|++|+++++++|++.++.|+||+|
T Consensus         5 v~i~~~~~d~~~~~~~~~~~~~GAvv~F~G~VR~~~~g~~V~~L~ye~y~~ma~~~l~~I~~ea~~r~~~~~v~v~HR~G   84 (149)
T 2q5w_E            5 FEIVIEPIQTEQYREFTINEYQGAVVVFTGHVREWTKGVKTEYLEYEAYIPMAEKKLAQIGDEINEKWPGTITSIVHRIG   84 (149)
T ss_dssp             EEEESSCCCCHHHHHHHCCTTCCEEEEEEEECCSCSSSSCEEEEEEEECHHHHHHHHHHHHHHHHHHSTTCEEEEEEECE
T ss_pred             EEEECCCCCHHHHHHHhcCCCCcEEEEEEEEECCCCCCCcEEEEEEEeCchHHHHHHHHHHHHHHHhCCCcEEEEEEEEc
Confidence            34467899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCeEEEEEeecCChHHHHHHHHHHHHHHHhcCceeeEEEecCCceeeecCc
Q 029283           91 PVPVGETSVFIAVSAVHRADALDACKFLIDELKASVPIWKKEVYSNGEVWKENSE  145 (196)
Q Consensus        91 ~L~vGE~iV~VaVss~HR~eAF~A~~~iID~lK~~vPIWKkE~~~dG~~Wv~~~~  145 (196)
                      .|+|||+||+|+|+|+||++||+||+|+||+||+++||||||+|.||+.||++..
T Consensus        85 ~l~vGe~~v~VaVss~HR~~Af~A~~~~iD~lK~~aPiWKkE~~~dG~~Wv~~~~  139 (149)
T 2q5w_E           85 PLQISDIAVLIAVSSPHRKDAYRANEYAIERIKEIVPIWKKEIWEDGSKWQGHQK  139 (149)
T ss_dssp             EECTTCEEEEEEEEESSHHHHHHHHHHHHHHHHHHCCEEEEEEETTEEEECCC--
T ss_pred             ccCCCCeEEEEEEEcccHHHHHHHHHHHHHHHHhhCCEEEEEEcCCCCEEecCCC
Confidence            9999999999999999999999999999999999999999999999999998643

>2omd_A Molybdopterin-converting factor subunit 2; MOAE, coenzyme biosynthesis, structural genomics, NPPSFA; 2.00A {Aquifex aeolicus}

Probab=100.00  E-value=4.8e-50  Score=326.03  Aligned_cols=135  Identities=28%  Similarity=0.557  Sum_probs=121.2

Q ss_pred             EEcccCCCCHHHHHHHhcCCC-ccEEEEEEEEEcCCCCCe-eeeEEEEEEehhhHHHHHHHHHHHHHhccCCceEEEEEE
Q 029283           11 ILEENNPVDMTKYMTYVSAPQ-AGAIATFSGTTRDTFDGK-IVVELRYESYVSMAIRCIKSICSLARSSWNLHSIAVAHR   88 (196)
Q Consensus        11 i~~~~~piDl~~~~~~v~~~~-~GAIv~F~G~VR~~~~G~-~V~~L~yEay~~mA~k~L~~I~~ea~~~~~l~~v~I~HR   88 (196)
                      +.++.+|||++++++.+++|. +||+++|+|+||+.++|+ +|.+|+||+|++||++.|++|+++++++|++.++.|+||
T Consensus         9 ~~i~~~~~d~~~~~~~~~~~~~~GAvv~F~G~VR~~~~g~~~V~~Leye~y~~mae~~l~~I~~ea~~r~~l~~v~v~HR   88 (154)
T 2omd_A            9 VYLGHEWFGAERILSEYQVPEDCGAQVLFLGIPRNAPEDGGNIEALEYEAYPEMAIKEMEKIRQETIEKFGVKEVFIHHR   88 (154)
T ss_dssp             EEEESSCCCHHHHHHHCCCCTTCCEEEEEEECCCCCGGGTSCEEEEEEEECHHHHHHHHHHHHHHHHHHHCCSEEEEEEE
T ss_pred             EEEECCCCCHHHHHHHhcCCCCCcEEEEEEEEECCCCCCcccEEEEEEEeCchHHHHHHHHHHHHHHHhCCCceEEEEEE
Confidence            445679999999999999888 999999999999999888 999999999999999999999999999999999999999


Q ss_pred             eccCCCCCeEEEEEeecCChHHHHHHHHHHHHHHHhcCceeeEEEecCC-ceeeecCc
Q 029283           89 LGPVPVGETSVFIAVSAVHRADALDACKFLIDELKASVPIWKKEVYSNG-EVWKENSE  145 (196)
Q Consensus        89 ~G~L~vGE~iV~VaVss~HR~eAF~A~~~iID~lK~~vPIWKkE~~~dG-~~Wv~~~~  145 (196)
                      +|.|+|||+||+|+|+|+||++||+||+|+||+||+++||||||+|.|| +.||++++
T Consensus        89 ~G~l~vGe~iv~VaVss~HR~~Af~A~~~~iD~lK~~aPiWKkE~~~dG~~~Wv~~~~  146 (154)
T 2omd_A           89 LGLVKIGEPSFLVLAVGGHREETFKACRYAVDETKKRVPIWKKEIFKEGKGEWVLGEK  146 (154)
T ss_dssp             CEEEETTSCCEEEEEEESSHHHHHHHHHHHHHHHHHHSCEEEEEEEC-----------
T ss_pred             EcccCCCCeEEEEEEeccCHHHHHHHHHHHHHHHHhhCCEEEEEEeCCCCceecCCCC
Confidence            9999999999999999999999999999999999999999999999999 79998864

>4ap8_A Molybdopterin synthase catalytic subunit; transferase; 2.78A {Homo sapiens}

Probab=100.00  E-value=2.2e-49  Score=316.47  Aligned_cols=134  Identities=44%  Similarity=0.779  Sum_probs=127.3

Q ss_pred             CCCcccceEEEEcccCCCCHHHHHHHhcCCCccEEEEEEEEEcCCCCCeeeeEEEEEEehhhHHHHHHHHHHHHHhccCC
Q 029283            1 MAGEDRTLVEILEENNPVDMTKYMTYVSAPQAGAIATFSGTTRDTFDGKIVVELRYESYVSMAIRCIKSICSLARSSWNL   80 (196)
Q Consensus         1 ~~~~~~~~v~i~~~~~piDl~~~~~~v~~~~~GAIv~F~G~VR~~~~G~~V~~L~yEay~~mA~k~L~~I~~ea~~~~~l   80 (196)
                      |.++.++++.|+  .+|||++++++++.+|.+||+++|+|+||+.++|++|.+|+||+|++||++.|++|+++++++|++
T Consensus         2 v~~~~~d~i~it--~e~l~~~~~~~~v~~p~~GAvv~F~G~VR~~~~g~~V~~L~ye~y~~ma~~~l~~I~~ea~~r~~l   79 (135)
T 4ap8_A            2 VEEKSKDVINFT--AEKLSVDEVSQLVISPLCGAISLFVGTTRNNFEGKKVISLEYEAYLPMAENEVRKICSDIRQKWPV   79 (135)
T ss_dssp             CCCCCCEEEEEE--SSCCCHHHHHHHTCCTTCSEEEEEEEECCSEETTEEEEEEEEEEEETHHHHHHHHHHHHHHHHSCE
T ss_pred             cccCCCCeEEEE--cCCCCHHHHHHHhcCCCCCeEEEEEEEECCCCCCCcEEEEEEEecchHHHHHHHHHHHHHHHhcCC
Confidence            345667777775  589999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ceEEEEEEeccCCCCCeEEEEEeecCChHHHHHHHHHHHHHHHhcCceeeEEEecC
Q 029283           81 HSIAVAHRLGPVPVGETSVFIAVSAVHRADALDACKFLIDELKASVPIWKKEVYSN  136 (196)
Q Consensus        81 ~~v~I~HR~G~L~vGE~iV~VaVss~HR~eAF~A~~~iID~lK~~vPIWKkE~~~d  136 (196)
                      .++.|+||+|.|+|||+||+|+|+|+||++||+||+|+||+||+++||||||+|.|
T Consensus        80 ~~v~i~HR~G~l~~ge~~v~Vav~s~HR~~Af~A~~~~id~lK~~~PiWKkE~~~D  135 (135)
T 4ap8_A           80 KHIAVFHRLGLVPVSEASIIIAVSSAHRAASLEAVSYAIDTLKAKVPIWKKEIYEE  135 (135)
T ss_dssp             EEEEEEEECEEEETTSEEEEEEEEESSHHHHHHHHHHHHHHHHHHSCEEEEEEEC-
T ss_pred             cceeehhhcccccCCCeEEEEEEEccCHHHHHHHHHHHHHHHhhcCCceeceeccC
Confidence            99999999999999999999999999999999999999999999999999999986

>3rpf_A Molybdopterin synthase catalytic subunit; MCSG, PSI-biology, structural genomics, midwest center for S genomics, transferase; 1.90A {Helicobacter pylori}

Probab=100.00  E-value=2.4e-46  Score=302.81  Aligned_cols=132  Identities=21%  Similarity=0.396  Sum_probs=122.1

Q ss_pred             EEcccCCCCHHHHHHH----hcCCCccEEEEEEEEEcCCCCCeeeeEEEEEEehhhHHHHHHHHHHHHHhccCCceEEEE
Q 029283           11 ILEENNPVDMTKYMTY----VSAPQAGAIATFSGTTRDTFDGKIVVELRYESYVSMAIRCIKSICSLARSSWNLHSIAVA   86 (196)
Q Consensus        11 i~~~~~piDl~~~~~~----v~~~~~GAIv~F~G~VR~~~~G~~V~~L~yEay~~mA~k~L~~I~~ea~~~~~l~~v~I~   86 (196)
                      +.++.+|||++++++.    +.+|++||+++|+|+||++ +|  |++|+||+|+|||++.|++|+++++++| + ++.++
T Consensus         5 v~i~~~~~d~~~~~~~~~~~~~~~~~GAvv~F~G~VR~~-~~--V~~L~ye~y~~ma~~~l~~I~~ea~~~~-~-~v~i~   79 (148)
T 3rpf_A            5 LKIIQGALDTRELLKAYQEEACAKNFGAFCVFVGIVRKE-DN--IQGLSFDIYEALLKTWFEKWHHKAKDLG-V-VLKMA   79 (148)
T ss_dssp             EEEEESSCCHHHHHHHHHHHHHHTTCCEEEEEEEECCCC-TT--CCEEEEEECHHHHHHHHHHHHHHHHHTT-E-EEEEE
T ss_pred             EEEEcCCCCHHHHHHHHHhcccCCCCcEEEEEEEEEECC-CC--EeEEEEEcCHHHHHHHHHHHHHHHhhcC-C-EEEEE
Confidence            3446799999999885    4679999999999999997 33  9999999999999999999999999987 4 89999


Q ss_pred             EEeccCCCCCeEEEEEeecCChHHHHHHHHHHHHHHHhcCceeeEEEecCCceeeecCcch
Q 029283           87 HRLGPVPVGETSVFIAVSAVHRADALDACKFLIDELKASVPIWKKEVYSNGEVWKENSEFM  147 (196)
Q Consensus        87 HR~G~L~vGE~iV~VaVss~HR~eAF~A~~~iID~lK~~vPIWKkE~~~dG~~Wv~~~~~~  147 (196)
                      ||+|.|+|||+||+|+|+|+||++||+||+|+||+||+++||||||++.||+.|+++++-.
T Consensus        80 HR~G~l~~Ge~~v~VaVss~HR~~Af~A~~~~id~lK~~~PiWKkE~~~~g~~Wv~~r~~~  140 (148)
T 3rpf_A           80 HSLGDVLIGQSSFLCVSMGKNRKNALELYENFIEDFKHNAPIWKYDLIHNKRIYAKERSHP  140 (148)
T ss_dssp             EEEEEEETTCEEEEEEEEESSHHHHHHHHHHHHHHHHHHSCEEEEEEETTEEEECGGGCBC
T ss_pred             EEEcccCCCCEEEEEEEEcccHHHHHHHHHHHHHHHHhcCCEEEEEEeCCCcEEecCCccc
Confidence            9999999999999999999999999999999999999999999999999999999986543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	196
d1fm0e_	149	d.41.5.1 (E:) Molybdopterin synthase subunit MoaE	6e-41

>d1fm0e_ d.41.5.1 (E:) Molybdopterin synthase subunit MoaE {Escherichia coli [TaxId: 562]} Length = 149

class: Alpha and beta proteins (a+b)
fold: alpha/beta-Hammerhead
superfamily: Molybdopterin synthase subunit MoaE
family: Molybdopterin synthase subunit MoaE
domain: Molybdopterin synthase subunit MoaE
species: Escherichia coli [TaxId: 562]

 Score =  133 bits (337), Expect = 6e-41
 Identities = 44/140 (31%), Positives = 70/140 (50%), Gaps = 3/140 (2%)

Query: 7   TLVEILEENNPVDMTK-YMTYVSAPQAGAIATFSGTTRDTFDGKIVVELRYESYVSMAIR 65
           T + +  +  P  + + Y       + GA+ TF+G  R+   G  V  L  E Y  M  +
Sbjct: 3   TKIVVGPQ--PFSVGEEYPWLAERDEDGAVVTFTGKVRNHNLGDSVNALTLEHYPGMTEK 60

Query: 66  CIKSICSLARSSWNLHSIAVAHRLGPVPVGETSVFIAVSAVHRADALDACKFLIDELKAS 125
            +  I   AR+ W L  + V HR+G +  G+  VF+ V++ HR+ A +A +F++D LK  
Sbjct: 61  ALAEIVDEARNRWPLGRVTVIHRIGELWPGDEIVFVGVTSAHRSSAFEAGQFIMDYLKTR 120

Query: 126 VPIWKKEVYSNGEVWKENSE 145
            P WK+E    G+ W E  E
Sbjct: 121 APFWKREATPEGDRWVEARE 140

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	196
d1fm0e_	149	Molybdopterin synthase subunit MoaE {Escherichia c	100.0

>d1fm0e_ d.41.5.1 (E:) Molybdopterin synthase subunit MoaE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: alpha/beta-Hammerhead
superfamily: Molybdopterin synthase subunit MoaE
family: Molybdopterin synthase subunit MoaE
domain: Molybdopterin synthase subunit MoaE
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=3.3e-50  Score=323.68  Aligned_cols=141  Identities=30%  Similarity=0.588  Sum_probs=126.7

Q ss_pred             EEEEcccCCCCHHHHHHHhc-CCCccEEEEEEEEEcCCCCCeeeeEEEEEEehhhHHHHHHHHHHHHHhccCCceEEEEE
Q 029283            9 VEILEENNPVDMTKYMTYVS-APQAGAIATFSGTTRDTFDGKIVVELRYESYVSMAIRCIKSICSLARSSWNLHSIAVAH   87 (196)
Q Consensus         9 v~i~~~~~piDl~~~~~~v~-~~~~GAIv~F~G~VR~~~~G~~V~~L~yEay~~mA~k~L~~I~~ea~~~~~l~~v~I~H   87 (196)
                      ..|.++++|||++.+++.+. .|++||+++|+|+||+.++|++|+.|+||+|++||++.|++|++++.++|++.++.|+|
T Consensus         3 ~~i~i~~ep~d~~~~~~~l~~~~~~GAiv~F~G~VR~~~~g~~V~~L~ye~y~~ma~k~l~~I~~ea~~k~~l~~v~i~H   82 (149)
T d1fm0e_           3 TKIVVGPQPFSVGEEYPWLAERDEDGAVVTFTGKVRNHNLGDSVNALTLEHYPGMTEKALAEIVDEARNRWPLGRVTVIH   82 (149)
T ss_dssp             EEEEEESSCCCHHHHHHHHTCCTTCCEEEEEEEECC-------CCCEEEEECHHHHHHHHHHHHHHHHHHSCEEEEEEEE
T ss_pred             CEEEEEcCCCCHHHHHHHHhcCCCCCeEEEEEEEECCCCCCCceeEEEEEechhHHHHHHHHHHHHHHhccCcccEEEEE
Confidence            35677889999999998875 58999999999999999999999999999999999999999999999999999999999


Q ss_pred             EeccCCCCCeEEEEEeecCChHHHHHHHHHHHHHHHhcCceeeEEEecCCceeeecCcchhh
Q 029283           88 RLGPVPVGETSVFIAVSAVHRADALDACKFLIDELKASVPIWKKEVYSNGEVWKENSEFMER  149 (196)
Q Consensus        88 R~G~L~vGE~iV~VaVss~HR~eAF~A~~~iID~lK~~vPIWKkE~~~dG~~Wv~~~~~~~~  149 (196)
                      |+|.|+|||+||+|+|+|+||++||+||+|+||+||+++||||||++.||+.||+++.-...
T Consensus        83 R~G~l~vGe~~v~v~v~s~HR~~Af~a~~~~id~lK~~vPiWKkE~~~dg~~Wv~~~~~d~~  144 (149)
T d1fm0e_          83 RIGELWPGDEIVFVGVTSAHRSSAFEAGQFIMDYLKTRAPFWKREATPEGDRWVEARESDQQ  144 (149)
T ss_dssp             ECEEECTTCEEEEEEEEESSHHHHHHHHHHHHHHHHHHSCEEEEEEETTEEEECCCCHHHHH
T ss_pred             eeceecCCCeeEEEEEecCCHHHHHHHHHHHHHHHHhcCCeEeeEecCCcCeEccCcccCHH
Confidence            99999999999999999999999999999999999999999999999999999998775443