Citrus Sinensis ID: 029285

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190------
Protein Sequence
MRKDSSIICNNYVNRLSVNFTLTYTSSQFYQTTTVRKCRCNGQFLTTKAKMSVEGGILKKEPIRDSDKIDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQVDG
Secondary Structure (PSIPRED)
ccccccEEEEccccEEEEEcccccccccEEEEEEEEEcEEccccEEEcccccccccccccccccccccccccEEEEEEEEEEcccHHHHHHHHHHccccEEEccccccccccEEEEEEcccEEEEEEEccccccccccccccccccEEEEEEccHHHHHHHHHHcccEEEEcccccEEEEEEcccccEEEEEEEcc
Secondary Structure Prediction (SSPRO)
cccccEEEEccccEEEEEcccccccccHHHcccHHccccccccccccccEEcccccEEEEEcccccccccccccEEEEEEEEEccHHHHHHHHHHHcccEEccccHHHcccccHccccccccEEEEEcccccccccccccHccccccEEEEEccHHHHHHHHHHcccEEEEcccccEEEEEEccccccEEEEEEcc
Coil and Loop (DISEMBL)
mrkdssiicnnyvnRLSVNFTLTytssqfyqtttvrkcrcngqflttkAKMSveggilkkepirdsdkidygvVSVHHVGILCENLERSLEFYQNILGLeinearphdklpyrgaWLWVGAEMIhlmelpnpdplsgrpehggrdrhtciaIRDVSKLKMILDKAGisytlsksgrpaiftrdpdanaleftqvdg
Flexible Loop (DISEMBL)
mrkdssiicNNYVNRLSVNFTLTYTSSQFYQTTTVRKCRCNGQflttkakmsveggilkkepirdsdkIDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGIsytlsksgrpaiftrdpdanaleftqvdg
Low Complexity Region (SEG)
MRKDSSIICNNYVNRLSVNFtltytssqfyqtttVRKCRCNGQFLTTKAKMSVEGGILKKEPIRDSDKIDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQVDG
Disordered region (IsUnstruct)
******IICNNYVNRLSVNFTLTYTSSQFYQTTTVRKCRCNGQFLTTKAKMSVEGGILKKEPIRDSDKIDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMEL*****************HTCIAIRDVSKLKMILDKAGISYTLS************************
Disordered Region (DISOPRED)
****SSI*CNNYVNRLSV********************************************************SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQVD*
Disordered Region (DISEMBL)
MRKDSSIICNNYVNRLSVNFTLTYTSSQFYQTTTVRKCRCNGQFLTTKAKMSVEGGILKKEPIRDSDKIDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLS********DRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQVDG
Disordered Region (DISPRO)
****SSIICNNYVNRLSVNFTLTYTSSQFYQTTTVRKCRCNGQFLTTKAKMSVEGGILKKEPIRDSDKIDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQVDG
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MRKDSSIICNNYVNRLSVNFTLTYTSSQFYQTTTVRKCRCNGQFLTTKAKMSVEGGILKKEPIRDSDKIDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQVDG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	196	2.2.26 [Sep-21-2011]
P45871	128	Uncharacterized protein Y	yes	no	0.602	0.921	0.298	8e-07
Q96PE7	176	Methylmalonyl-CoA epimera	yes	no	0.525	0.585	0.304	3e-05
Q9D1I5	178	Methylmalonyl-CoA epimera	yes	no	0.545	0.601	0.271	0.0003

>sp|P45871|YWKD_BACSU Uncharacterized protein YwkD OS=Bacillus subtilis (strain 168) GN=ywkD PE=4 SV=1

 Score = 53.5 bits (127), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 56/124 (45%), Gaps = 6/124 (4%)

Query: 75  SVHHVGILCENLERSLEFYQNILGLE-INEARPHDKLPYRGAWLWVGAEMIHLMELPNPD 133
           S+HH+ I+C + E+S  FY + LG + I E    ++  Y+      G+ +I L   P+P 
Sbjct: 5   SIHHIAIICSDYEKSKAFYVHKLGFQVIQETYREERGSYKLDLSLNGSYVIELFSFPDPP 64

Query: 134 PLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISY----TLSKSGRPAIFTRDPDANAL 189
               RPE  G  RH    +  + K    L + GI      T   +G+   F  DPD   L
Sbjct: 65  ERQTRPEAAGL-RHLAFTVGSLDKAVQELHEKGIETEPIRTDPLTGKRFTFFFDPDQLPL 123

Query: 190 EFTQ 193
           E  +
Sbjct: 124 ELYE 127

Bacillus subtilis (strain 168) (taxid: 224308)

>sp|Q96PE7|MCEE_HUMAN Methylmalonyl-CoA epimerase, mitochondrial OS=Homo sapiens GN=MCEE PE=1 SV=1

 Score = 48.5 bits (114), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 59/125 (47%), Gaps = 22/125 (17%)

Query: 76  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHL----MELPN 131
           ++HV I   +LE++  FY+NILG +++EA P   LP  G    V    ++L    MEL +
Sbjct: 48  LNHVAIAVPDLEKAAAFYKNILGAQVSEAVP---LPEHG----VSVVFVNLGNTKMELLH 100

Query: 132 P----DPLSG--RPEHGGRDRHTCIAIRDVSKLKMILDKAGI-----SYTLSKSGRPAIF 180
           P     P++G  +    G   H CI + +++   M L K  I        +   G+P IF
Sbjct: 101 PLGRDSPIAGFLQKNKAGGMHHICIEVDNINAAVMDLKKKKIRSLSEEVKIGAHGKPVIF 160

Query: 181 TRDPD 185
               D
Sbjct: 161 LHPKD 165

Homo sapiens (taxid: 9606)

EC: 5

EC: .

EC: 1

EC: .

EC: 9

EC: 9

EC: .

EC: 1

>sp|Q9D1I5|MCEE_MOUSE Methylmalonyl-CoA epimerase, mitochondrial OS=Mus musculus GN=Mcee PE=2 SV=1

 Score = 45.1 bits (105), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/129 (27%), Positives = 59/129 (45%), Gaps = 22/129 (17%)

Query: 76  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHL----MELPN 131
           ++HV +   +LE++  FY+++LG +++E  P   LP  G    V    ++L    MEL +
Sbjct: 50  LNHVAVAVPDLEKASSFYRDVLGAQVSEVVP---LPEHG----VSVVFVNLGNTKMELLH 102

Query: 132 P----DPLSG--RPEHGGRDRHTCIAIRDVSKLKMILDKAGI-----SYTLSKSGRPAIF 180
           P     P++G  +    G   H CI + ++S   M L K  I        +   G+P IF
Sbjct: 103 PLGSDSPITGFLQKNKAGGMHHVCIEVDNISAAVMDLKKKKIRSLSDEAKIGAHGKPVIF 162

Query: 181 TRDPDANAL 189
               D   +
Sbjct: 163 LHPKDCGGV 171

Mus musculus (taxid: 10090)

EC: 5

EC: .

EC: 1

EC: .

EC: 9

EC: 9

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	196
388493084	200	unknown [Lotus japonicus]	0.923	0.905	0.724	2e-73
359807103	206	uncharacterized protein LOC100805881 [Gl	0.948	0.902	0.705	7e-72
449489903	206	PREDICTED: uncharacterized LOC101203815	0.908	0.864	0.726	3e-71
356547897	209	PREDICTED: uncharacterized protein LOC10	0.943	0.885	0.705	6e-71
297738629	199	unnamed protein product [Vitis vinifera]	0.933	0.919	0.711	8e-71
15242020	197	Lactoylglutathione lyase / glyoxalase I	0.857	0.852	0.754	9e-71
225444850	205	PREDICTED: uncharacterized protein ywkD-	0.933	0.892	0.711	9e-71
147789730	205	hypothetical protein VITISV_016330 [Viti	0.933	0.892	0.711	9e-71
297796591	196	lactoylglutathione lyase family protein	0.836	0.836	0.773	8e-70
449452528	175	PREDICTED: uncharacterized protein LOC10	0.841	0.942	0.760	3e-69

>gi|388493084|gb|AFK34608.1| unknown [Lotus japonicus]

 Score =  280 bits (716), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 134/185 (72%), Positives = 155/185 (83%), Gaps = 4/185 (2%)

Query: 11  NYVNRLSVNFTLTYTSSQFYQTTTVRKCRCNGQFLTTKAKMSVEGGILKKEPIRDSDKID 70
           NYV+   +   L    S+FY  + V+  RC    ++ KA+++VEG +L KE    ++  D
Sbjct: 19  NYVSFSPLTMNL---RSKFYHAS-VKNGRCYVPSMSIKAQVAVEGDVLDKESEPINEGSD 74

Query: 71  YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELP 130
           YGVVS+HHVGILCENLER L+FYQN+LGLEINEARPHDKLPYRGAWLWVG+EMIHLMELP
Sbjct: 75  YGVVSIHHVGILCENLERPLDFYQNVLGLEINEARPHDKLPYRGAWLWVGSEMIHLMELP 134

Query: 131 NPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALE 190
           NPDPL+GRP+HGGRDRHTCIAIRDVSKLK ILDKAGISYTLS+SGRPAIFTRDPDANALE
Sbjct: 135 NPDPLTGRPQHGGRDRHTCIAIRDVSKLKAILDKAGISYTLSRSGRPAIFTRDPDANALE 194

Query: 191 FTQVD 195
           FTQ+D
Sbjct: 195 FTQID 199

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359807103|ref|NP_001241602.1| uncharacterized protein LOC100805881 [Glycine max] gi|255638057|gb|ACU19343.1| unknown [Glycine max]

 Score =  275 bits (703), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 132/187 (70%), Positives = 154/187 (82%), Gaps = 1/187 (0%)

Query: 10  NNYVNRLSVNFTLTYTSSQFYQTTTVRKCRCNGQFLTTKAKMSVEGGILKKEPIRDSDKI 69
           N  +N +S +   T   S+F + + VR  R +   LT K++ +VEG +L+KE +  +++ 
Sbjct: 21  NQKLNYVSFSPMTTNLQSKFCRAS-VRNGRWHVPSLTIKSQAAVEGDVLEKESVSINEES 79

Query: 70  DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMEL 129
           DYGVV +HHVGILCENLERSLEFYQN+LGL+INEARPHDKLPYRGAWLWVG+EMIHLMEL
Sbjct: 80  DYGVVCMHHVGILCENLERSLEFYQNVLGLKINEARPHDKLPYRGAWLWVGSEMIHLMEL 139

Query: 130 PNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANAL 189
           PNPDPL+GR +HGGRDRHTCIAIRDVSKLK I DKAGI YTLS SGRPAIF RDPDANAL
Sbjct: 140 PNPDPLTGRAQHGGRDRHTCIAIRDVSKLKAIFDKAGIPYTLSHSGRPAIFARDPDANAL 199

Query: 190 EFTQVDG 196
           EFTQVDG
Sbjct: 200 EFTQVDG 206

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449489903|ref|XP_004158454.1| PREDICTED: uncharacterized LOC101203815 [Cucumis sativus]

 Score =  273 bits (697), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 133/183 (72%), Positives = 148/183 (80%), Gaps = 5/183 (2%)

Query: 19  NFTLTYTSSQFYQTTTVRK---CRCNGQFLTTKAKMSVEGGILKK--EPIRDSDKIDYGV 73
           NF+   T+S F +   + +   C  +G   TT+AK  +E  +L+K  EPI    + DYG 
Sbjct: 24  NFSSISTNSSFKKHGKIERVGGCGYHGSCFTTRAKGGIEQDVLEKDKEPIEIDVENDYGA 83

Query: 74  VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPD 133
           V VHHVG+LCENLERSL FY NILGL+INEARPHDKLPYRGAWLWVGAEMIHLMELPNPD
Sbjct: 84  VGVHHVGVLCENLERSLHFYLNILGLQINEARPHDKLPYRGAWLWVGAEMIHLMELPNPD 143

Query: 134 PLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQ 193
           PL+GRPEHGGRDRHTC+ IRDVSKLK ILDKAGI YTLSKSGRPAIFTRDPDANALEFTQ
Sbjct: 144 PLTGRPEHGGRDRHTCLGIRDVSKLKAILDKAGIPYTLSKSGRPAIFTRDPDANALEFTQ 203

Query: 194 VDG 196
           VDG
Sbjct: 204 VDG 206

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356547897|ref|XP_003542341.1| PREDICTED: uncharacterized protein LOC100788142 [Glycine max]

 Score =  272 bits (695), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 132/187 (70%), Positives = 154/187 (82%), Gaps = 2/187 (1%)

Query: 10  NNYVNRLSVNFTLTYTSSQFYQTTTVRKCRCNGQFLTTKAKMSVEGGIL-KKEPIRDSDK 68
           N  +N    +F+     S+FY  + VR  R N   +T KA+ +VEG +L  +E I  +++
Sbjct: 23  NQKLNYTHKSFSPINLQSKFYHAS-VRNGRWNVPSMTIKAQAAVEGDVLLDEESICVNEE 81

Query: 69  IDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLME 128
            DYGVV +HHVGILCENLERSL+FYQN+LGL+INEARPH+KLPYRGAWLWVG+EMIHLME
Sbjct: 82  SDYGVVCMHHVGILCENLERSLDFYQNVLGLKINEARPHNKLPYRGAWLWVGSEMIHLME 141

Query: 129 LPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANA 188
           LPNPDPL+GRP+HGGRDRHTCIAIRDVSKLK I DKAGI+YTLS SGRPAIFTRDPDANA
Sbjct: 142 LPNPDPLTGRPQHGGRDRHTCIAIRDVSKLKAIFDKAGIAYTLSHSGRPAIFTRDPDANA 201

Query: 189 LEFTQVD 195
           LEFTQVD
Sbjct: 202 LEFTQVD 208

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297738629|emb|CBI27874.3| unnamed protein product [Vitis vinifera]

 Score =  271 bits (694), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 131/184 (71%), Positives = 146/184 (79%), Gaps = 1/184 (0%)

Query: 13  VNRLSVNFTLTYTSSQFYQTTTVRKCRCNGQFLTTKAKMSVEGGILKKEPIRDSDKIDYG 72
           VNR S+N T++          TVR    +G  L T AKMSVEG ++ KE I    K D G
Sbjct: 17  VNRFSLN-TISRNLLSNRNQLTVRNGPTHGHRLITTAKMSVEGDVMVKEAISTDQKNDIG 75

Query: 73  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 132
           +VS+HHVGILCENLERS +FY N+LG  +NEARP+DKLPYRGAWLWVG+EMIHLMELPNP
Sbjct: 76  IVSLHHVGILCENLERSFDFYHNLLGFPVNEARPNDKLPYRGAWLWVGSEMIHLMELPNP 135

Query: 133 DPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFT 192
           DPL+GRPEHGGRDRH CIAIRDVSKLK ILD+AGI YTLSKSGRPAIFTRDPDANALEF 
Sbjct: 136 DPLTGRPEHGGRDRHACIAIRDVSKLKEILDEAGIPYTLSKSGRPAIFTRDPDANALEFV 195

Query: 193 QVDG 196
           QVD 
Sbjct: 196 QVDA 199

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15242020|ref|NP_200514.1| Lactoylglutathione lyase / glyoxalase I family protein [Arabidopsis thaliana] gi|8777444|dbj|BAA97034.1| unnamed protein product [Arabidopsis thaliana] gi|21594695|gb|AAM66034.1| unknown [Arabidopsis thaliana] gi|88193792|gb|ABD42985.1| At5g57040 [Arabidopsis thaliana] gi|110742698|dbj|BAE99260.1| hypothetical protein [Arabidopsis thaliana] gi|332009455|gb|AED96838.1| Lactoylglutathione lyase / glyoxalase I family protein [Arabidopsis thaliana]

 Score =  271 bits (694), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 132/175 (75%), Positives = 151/175 (86%), Gaps = 7/175 (4%)

Query: 25  TSSQF-YQTTTVRKCRCNGQFLTTKAKM---SVEG-GILKKEPIRDSDKIDYGVVSVHHV 79
           T  +F +Q  +VRK R N +F + KAK    S+EG  +++++ +  ++K DYGVV VHHV
Sbjct: 25  TKERFEFQKKSVRKERINVRFYSLKAKAQGSSIEGISVVQEKEL--NNKTDYGVVGVHHV 82

Query: 80  GILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRP 139
           G+LCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG+EMIHLMELPNPDPL+GRP
Sbjct: 83  GLLCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGSEMIHLMELPNPDPLTGRP 142

Query: 140 EHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQV 194
           EHGGRDRH CIAIRDVS LK ILDKAGI+YT+SKSGRPAIFTRDPDANALEFTQV
Sbjct: 143 EHGGRDRHACIAIRDVSNLKEILDKAGIAYTMSKSGRPAIFTRDPDANALEFTQV 197

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225444850|ref|XP_002281014.1| PREDICTED: uncharacterized protein ywkD-like [Vitis vinifera]

 Score =  271 bits (694), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 131/184 (71%), Positives = 146/184 (79%), Gaps = 1/184 (0%)

Query: 13  VNRLSVNFTLTYTSSQFYQTTTVRKCRCNGQFLTTKAKMSVEGGILKKEPIRDSDKIDYG 72
           VNR S+N T++          TVR    +G  L T AKMSVEG ++ KE I    K D G
Sbjct: 23  VNRFSLN-TISRNLLSNRNQLTVRNGPTHGHRLITTAKMSVEGDVMVKEAISTDQKNDIG 81

Query: 73  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 132
           +VS+HHVGILCENLERS +FY N+LG  +NEARP+DKLPYRGAWLWVG+EMIHLMELPNP
Sbjct: 82  IVSLHHVGILCENLERSFDFYHNLLGFPVNEARPNDKLPYRGAWLWVGSEMIHLMELPNP 141

Query: 133 DPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFT 192
           DPL+GRPEHGGRDRH CIAIRDVSKLK ILD+AGI YTLSKSGRPAIFTRDPDANALEF 
Sbjct: 142 DPLTGRPEHGGRDRHACIAIRDVSKLKEILDEAGIPYTLSKSGRPAIFTRDPDANALEFV 201

Query: 193 QVDG 196
           QVD 
Sbjct: 202 QVDA 205

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147789730|emb|CAN63060.1| hypothetical protein VITISV_016330 [Vitis vinifera]

 Score =  271 bits (693), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 131/184 (71%), Positives = 146/184 (79%), Gaps = 1/184 (0%)

Query: 13  VNRLSVNFTLTYTSSQFYQTTTVRKCRCNGQFLTTKAKMSVEGGILKKEPIRDSDKIDYG 72
           VNR S+N T++          TVR    +G  L T AKMSVEG ++ KE I    K D G
Sbjct: 23  VNRFSLN-TISRNLLSNRNQLTVRNGPTHGHRLITTAKMSVEGDVMVKEAISTDQKNDIG 81

Query: 73  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 132
           +VS+HHVGILCENLERS +FY N+LG  +NEARP+DKLPYRGAWLWVG+EMIHLMELPNP
Sbjct: 82  IVSLHHVGILCENLERSFDFYHNLLGFPVNEARPNDKLPYRGAWLWVGSEMIHLMELPNP 141

Query: 133 DPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFT 192
           DPL+GRPEHGGRDRH CIAIRDVSKLK ILD+AGI YTLSKSGRPAIFTRDPDANALEF 
Sbjct: 142 DPLTGRPEHGGRDRHACIAIRDVSKLKEILDEAGIPYTLSKSGRPAIFTRDPDANALEFV 201

Query: 193 QVDG 196
           QVD 
Sbjct: 202 QVDA 205

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297796591|ref|XP_002866180.1| lactoylglutathione lyase family protein [Arabidopsis lyrata subsp. lyrata] gi|297312015|gb|EFH42439.1| lactoylglutathione lyase family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  268 bits (685), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 130/168 (77%), Positives = 145/168 (86%), Gaps = 4/168 (2%)

Query: 30  YQTTTVRKCRCNGQFLT---TKAKMSVEGGILKKEPIRDSDKIDYGVVSVHHVGILCENL 86
           +Q  ++RK R N +F +    KA+ S+EG I   E  + ++K DYGVV VHHVG+LCENL
Sbjct: 30  FQKKSLRKERINVRFCSLKANKAQGSIEG-ISVVEEKQLNNKTDYGVVGVHHVGLLCENL 88

Query: 87  ERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDR 146
           ERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG+EMIHLMELPNPDPL+GRPEHGGRDR
Sbjct: 89  ERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGSEMIHLMELPNPDPLTGRPEHGGRDR 148

Query: 147 HTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQV 194
           H CIAIRDVS LK ILDKAGI+YT+SKSGRPAIFTRDPDANALEFTQV
Sbjct: 149 HACIAIRDVSNLKEILDKAGIAYTMSKSGRPAIFTRDPDANALEFTQV 196

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449452528|ref|XP_004144011.1| PREDICTED: uncharacterized protein LOC101203815 [Cucumis sativus]

 Score =  266 bits (681), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 127/167 (76%), Positives = 139/167 (83%), Gaps = 2/167 (1%)

Query: 32  TTTVRKCRCNGQFLTTKAKMSVEGGILKK--EPIRDSDKIDYGVVSVHHVGILCENLERS 89
              + +   +G   TT+AK  +E  +L+K  EPI    + DYG V VHHVG+LCENLERS
Sbjct: 9   VVVIMEVALHGSCFTTRAKGGIEQDVLEKDKEPIEIDVENDYGAVGVHHVGVLCENLERS 68

Query: 90  LEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTC 149
           L FY NILGL+INEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPL+GRPEHGGRDRHTC
Sbjct: 69  LHFYLNILGLQINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLTGRPEHGGRDRHTC 128

Query: 150 IAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQVDG 196
           + IRDVSKLK ILDKAGI YTLSKSGRPAIFTRDPDANALEFTQVDG
Sbjct: 129 LGIRDVSKLKAILDKAGIPYTLSKSGRPAIFTRDPDANALEFTQVDG 175

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	196
TAIR|locus:2164600	197	AT5G57040 "AT5G57040" [Arabido	0.806	0.802	0.786	9.4e-66
TAIR|locus:2016254	167	GLYI7 "AT1G80160" [Arabidopsis	0.617	0.724	0.304	1.9e-12
TAIR|locus:2037728	174	GLYI4 "AT1G15380" [Arabidopsis	0.617	0.695	0.304	1e-11
TIGR_CMR|BA_0607	128	BA_0607 "glyoxylase family pro	0.596	0.914	0.344	1.3e-11
TAIR|locus:2057522	184	GLYI8 "AT2G28420" [Arabidopsis	0.591	0.630	0.296	7.6e-09
UNIPROTKB|Q9KL58	127	VC_A0890 "Glyoxylase I family	0.586	0.905	0.296	1.1e-07
TIGR_CMR|VC_A0890	127	VC_A0890 "glyoxylase I family	0.586	0.905	0.296	1.1e-07
TIGR_CMR|CPS_2825	128	CPS_2825 "glyoxylase family pr	0.596	0.914	0.284	3.8e-07
UNIPROTKB|E2REA1	189	MCEE "Uncharacterized protein"	0.561	0.582	0.285	4.4e-06
UNIPROTKB|Q96PE7	176	MCEE "Methylmalonyl-CoA epimer	0.561	0.625	0.293	1e-05

TAIR|locus:2164600 AT5G57040 "AT5G57040" [Arabidopsis thaliana (taxid:3702)]

 Score = 669 (240.6 bits), Expect = 9.4e-66, P = 9.4e-66
 Identities = 129/164 (78%), Positives = 145/164 (88%)

Query:    35 VRKCRCNGQFLTTKAKM---SVEG-GILKKEPIRDSDKIDYGVVSVHHVGILCENLERSL 90
             VRK R N +F + KAK    S+EG  +++++ +  ++K DYGVV VHHVG+LCENLERSL
Sbjct:    36 VRKERINVRFYSLKAKAQGSSIEGISVVQEKEL--NNKTDYGVVGVHHVGLLCENLERSL 93

Query:    91 EFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI 150
             EFYQNILGLEINEARPHDKLPYRGAWLWVG+EMIHLMELPNPDPL+GRPEHGGRDRH CI
Sbjct:    94 EFYQNILGLEINEARPHDKLPYRGAWLWVGSEMIHLMELPNPDPLTGRPEHGGRDRHACI 153

Query:   151 AIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQV 194
             AIRDVS LK ILDKAGI+YT+SKSGRPAIFTRDPDANALEFTQV
Sbjct:   154 AIRDVSNLKEILDKAGIAYTMSKSGRPAIFTRDPDANALEFTQV 197

GO:0003824 "catalytic activity" evidence=ISS

GO:0008152 "metabolic process" evidence=ISS

GO:0009507 "chloroplast" evidence=IDA

TAIR|locus:2016254 GLYI7 "AT1G80160" [Arabidopsis thaliana (taxid:3702)]

 Score = 166 (63.5 bits), Expect = 1.9e-12, P = 1.9e-12
 Identities = 39/128 (30%), Positives = 64/128 (50%)

Query:    73 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 132
             + S++H+ +LC ++E S+ FYQN+LG  +   RP D   + GAWL+     IHL++ P P
Sbjct:    11 IKSLNHISLLCRSVEESISFYQNVLGF-LPIRRP-DSFDFDGAWLFGHGIGIHLLQSPEP 68

Query:   133 DPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYT---LSKSGRPA--IFTRDPDAN 187
             + L  + E   +D H       +  ++  L +  I Y    + + G     +F  DPDA 
Sbjct:    69 EKLLKKTEINPKDNHISFQCESMEAVEKKLKEMEIEYVRAVVEEGGIQVDQLFFHDPDAF 128

Query:   188 ALEFTQVD 195
              +E    D
Sbjct:   129 MIEICNCD 136

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=ISS

GO:0009414 "response to water deprivation" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

GO:0046482 "para-aminobenzoic acid metabolic process" evidence=RCA

TAIR|locus:2037728 GLYI4 "AT1G15380" [Arabidopsis thaliana (taxid:3702)]

 Score = 159 (61.0 bits), Expect = 1.0e-11, P = 1.0e-11
 Identities = 39/128 (30%), Positives = 63/128 (49%)

Query:    73 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 132
             + S++HV +LC +++ S+ FYQ +LG  I   RP + L + GAWL+     IHL+  P P
Sbjct:    11 LTSLNHVSVLCRSVDESMNFYQKVLGF-IPIRRP-ESLNFEGAWLFGHGIGIHLLCAPEP 68

Query:   133 DPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYT--LSKSGR---PAIFTRDPDAN 187
             + L  +     +D H       +  ++  L++ GI Y   L + G      +F  DPD  
Sbjct:    69 EKLPKKTAINPKDNHISFQCESMGVVEKKLEEMGIDYVRALVEEGGIQVDQLFFHDPDGF 128

Query:   188 ALEFTQVD 195
              +E    D
Sbjct:   129 MIEICNCD 136

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=ISS

GO:0009744 "response to sucrose stimulus" evidence=RCA

GO:0009750 "response to fructose stimulus" evidence=RCA

TIGR_CMR|BA_0607 BA_0607 "glyoxylase family protein" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 158 (60.7 bits), Expect = 1.3e-11, P = 1.3e-11
 Identities = 43/125 (34%), Positives = 61/125 (48%)

Query:    76 VHHVGILCENLERSLEFYQNILGLE-INEARPHDKLPYRGAWLWVGAE-MIHLMELPNPD 133
             VHHV I+C N E S +FY  ILG + INE    ++  Y+   L VG E  I L   PNP 
Sbjct:     6 VHHVAIICSNYEVSKDFYTRILGFKAINEVYRKERDSYK-LDLCVGKEYQIELFSFPNPP 64

Query:   134 PLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANAL 189
                  PE  G  RH   A+ ++ +    L + G+     +    +G+  +F +DPD   L
Sbjct:    65 KRPSFPEAAGL-RHLAFAVTNIEEAVQDLSQCGVETEAIRIDEITGKKFVFFQDPDGLPL 123

Query:   190 EFTQV 194
             E  +V
Sbjct:   124 ELYEV 128

GO:0003824 "catalytic activity" evidence=ISS

GO:0008152 "metabolic process" evidence=ISS

TAIR|locus:2057522 GLYI8 "AT2G28420" [Arabidopsis thaliana (taxid:3702)]

 Score = 132 (51.5 bits), Expect = 7.6e-09, P = 7.6e-09
 Identities = 37/125 (29%), Positives = 61/125 (48%)

Query:    73 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 132
             +++++HV  LC+++++SLEFY  +LG  +   RP     + GAWL+     IHL++  + 
Sbjct:    18 LMALNHVSRLCKDVKKSLEFYTKVLGF-VEIERPAS-FDFDGAWLFNYGVGIHLVQAKDQ 75

Query:   133 DPLSGRPEH-GGRDRHTCIAIRDVSKLKMILDKAGISY---TLSKSGRPAI---FTRDPD 185
             D L    +H    D H      D+  L+  L +  + Y   T+      AI   F  DPD
Sbjct:    76 DKLPSDTDHLDPMDNHISFQCEDMEALEKRLKEVKVKYIKRTVGDEKDAAIDQLFFNDPD 135

Query:   186 ANALE 190
                +E
Sbjct:   136 GFMVE 140

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=ISS

GO:0009845 "seed germination" evidence=RCA

GO:0016114 "terpenoid biosynthetic process" evidence=RCA

GO:0019915 "lipid storage" evidence=RCA

GO:0050826 "response to freezing" evidence=RCA

UNIPROTKB|Q9KL58 VC_A0890 "Glyoxylase I family protein" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)]

 Score = 121 (47.7 bits), Expect = 1.1e-07, P = 1.1e-07
 Identities = 37/125 (29%), Positives = 52/125 (41%)

Query:    76 VHHVGILCENLERSLEFYQNILGLEI---NEARPHDKLPYRGAWLWVGAEMIHLMELPNP 132
             +HH  I+C +  RS  FY  ILGL +   N     D   Y+          I L   P  
Sbjct:     5 IHHAAIICSDYPRSKAFYTEILGLRVLAENYRAARDS--YKLDLALPDGSQIELFSFPKA 62

Query:   133 DPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANA 188
                   PE  G  RH    + DV+++K  L++ G+S    +    +G+   F  DPD   
Sbjct:    63 PERPSFPEAQGL-RHLAFVVDDVAEIKAQLEQQGVSVEPIRIDEYTGKAYTFFADPDGLP 121

Query:   189 LEFTQ 193
             LE  Q
Sbjct:   122 LELYQ 126

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|VC_A0890 VC_A0890 "glyoxylase I family protein" [Vibrio cholerae O1 biovar El Tor (taxid:686)]

 Score = 121 (47.7 bits), Expect = 1.1e-07, P = 1.1e-07
 Identities = 37/125 (29%), Positives = 52/125 (41%)

Query:    76 VHHVGILCENLERSLEFYQNILGLEI---NEARPHDKLPYRGAWLWVGAEMIHLMELPNP 132
             +HH  I+C +  RS  FY  ILGL +   N     D   Y+          I L   P  
Sbjct:     5 IHHAAIICSDYPRSKAFYTEILGLRVLAENYRAARDS--YKLDLALPDGSQIELFSFPKA 62

Query:   133 DPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANA 188
                   PE  G  RH    + DV+++K  L++ G+S    +    +G+   F  DPD   
Sbjct:    63 PERPSFPEAQGL-RHLAFVVDDVAEIKAQLEQQGVSVEPIRIDEYTGKAYTFFADPDGLP 121

Query:   189 LEFTQ 193
             LE  Q
Sbjct:   122 LELYQ 126

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|CPS_2825 CPS_2825 "glyoxylase family protein" [Colwellia psychrerythraea 34H (taxid:167879)]

 Score = 116 (45.9 bits), Expect = 3.8e-07, P = 3.8e-07
 Identities = 35/123 (28%), Positives = 53/123 (43%)

Query:    76 VHHVGILCENLERSLEFYQNILGLEI-NEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP 134
             +HHV I+C + E+S +FY  ILG +I  E    D+  ++          I L   P+   
Sbjct:     5 IHHVAIICSDYEKSKDFYTRILGFKIIAENYRADRDSFKLDLALADGTQIELFSFPDAPK 64

Query:   135 LSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGI---SYTLSK-SGRPAIFTRDPDANALE 190
                 PE  G  RH    + +V  +   L   G+   S  + + +G+   F  DPD   LE
Sbjct:    65 RPSFPEAQGL-RHLAFNVENVEAVSQYLTNLGVDVESIRVDEYTGKQFTFFSDPDGLPLE 123

Query:   191 FTQ 193
               Q
Sbjct:   124 LYQ 126

GO:0003824 "catalytic activity" evidence=ISS

GO:0008152 "metabolic process" evidence=ISS

UNIPROTKB|E2REA1 MCEE "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 118 (46.6 bits), Expect = 4.4e-06, P = 4.4e-06
 Identities = 36/126 (28%), Positives = 62/126 (49%)

Query:    76 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGA---WLWVGAEMIHLME-LPN 131
             ++H+ +   +LE++  FY+NILG +I+E  P   LP  G    ++ +G   + L+  L N
Sbjct:    61 LNHIAVAVPDLEKAKAFYKNILGAQISEVVP---LPEHGVSVVFVNLGNTKMELLHPLGN 117

Query:   132 PDPLSG--RPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKS------GRPAIFTRD 183
               P++G  +    G   H CI + D++   M L +  I  +LS+       G+P IF   
Sbjct:   118 DSPIAGFLQKNKAGGMHHICIEVDDINAAVMDLKEKNIR-SLSEETKIGAHGKPVIFLHP 176

Query:   184 PDANAL 189
              D   +
Sbjct:   177 KDCGGI 182

GO:0046491 "L-methylmalonyl-CoA metabolic process" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0004493 "methylmalonyl-CoA epimerase activity" evidence=IEA

UNIPROTKB|Q96PE7 MCEE "Methylmalonyl-CoA epimerase, mitochondrial" [Homo sapiens (taxid:9606)]

 Score = 114 (45.2 bits), Expect = 1.0e-05, P = 1.0e-05
 Identities = 37/126 (29%), Positives = 62/126 (49%)

Query:    76 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGA---WLWVGAEMIHLME-LPN 131
             ++HV I   +LE++  FY+NILG +++EA P   LP  G    ++ +G   + L+  L  
Sbjct:    48 LNHVAIAVPDLEKAAAFYKNILGAQVSEAVP---LPEHGVSVVFVNLGNTKMELLHPLGR 104

Query:   132 PDPLSG--RPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKS------GRPAIFTRD 183
               P++G  +    G   H CI + +++   M L K  I  +LS+       G+P IF   
Sbjct:   105 DSPIAGFLQKNKAGGMHHICIEVDNINAAVMDLKKKKIR-SLSEEVKIGAHGKPVIFLHP 163

Query:   184 PDANAL 189
              D   +
Sbjct:   164 KDCGGV 169

GO:0046491 "L-methylmalonyl-CoA metabolic process" evidence=IDA

GO:0004493 "methylmalonyl-CoA epimerase activity" evidence=IDA

GO:0005759 "mitochondrial matrix" evidence=TAS

GO:0006635 "fatty acid beta-oxidation" evidence=TAS

GO:0019626 "short-chain fatty acid catabolic process" evidence=TAS

GO:0044255 "cellular lipid metabolic process" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.13.11.39	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00016519001 SubName- Full=Chromosome chr11 scaffold_13, whole genome shotgun sequence; (199 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	196
cd07245	114	cd07245, Glo_EDI_BRP_like_9, This conserved domain	2e-36
pfam00903	120	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resist	2e-13
cd06587	110	cd06587, Glo_EDI_BRP_like, This domain superfamily	1e-12
cd08354	122	cd08354, Glo_EDI_BRP_like_13, This conserved domai	3e-12
COG0346	138	COG0346, GloA, Lactoylglutathione lyase and relate	3e-12
cd08352	125	cd08352, Glo_EDI_BRP_like_1, This conserved domain	1e-11
pfam12681	109	pfam12681, Glyoxalase_2, Glyoxalase-like domain	1e-08
PRK11478	129	PRK11478, PRK11478, putative lyase; Provisional	3e-08
cd08346	126	cd08346, PcpA_N_like, N-terminal domain of Sphingo	7e-08
cd07253	125	cd07253, Glo_EDI_BRP_like_2, This conserved domain	1e-06
pfam13669	110	pfam13669, Glyoxalase_4, Glyoxalase/Bleomycin resi	6e-06
TIGR03081	128	TIGR03081, metmalonyl_epim, methylmalonyl-CoA epim	7e-06
cd07233	121	cd07233, Glyoxalase_I, Glyoxalase I catalyzes the	8e-06
cd07255	125	cd07255, Glo_EDI_BRP_like_12, This conserved domai	1e-04
cd07249	128	cd07249, MMCE, Methylmalonyl-CoA epimerase (MMCE)	4e-04
cd08357	125	cd08357, Glo_EDI_BRP_like_18, This conserved domai	0.001
cd07242	128	cd07242, Glo_EDI_BRP_like_6, This conserved domain	0.002
cd07244	121	cd07244, FosA, FosA, a Fosfomycin resistance prote	0.003

>gnl|CDD|176669 cd07245, Glo_EDI_BRP_like_9, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score =  122 bits (309), Expect = 2e-36
 Identities = 44/120 (36%), Positives = 59/120 (49%), Gaps = 10/120 (8%)

Query: 76  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-AEMIHLMELPNPDP 134
           + HV +   +LE S  FY ++LGLE     P     + GAWL+ G    +HL+E   PD 
Sbjct: 1   LDHVALRVPDLEASRAFYTDVLGLEEGPRPPF---LFPGAWLYAGDGPQLHLIEEDPPDA 57

Query: 135 LSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKS---GRPAIFTRDPDANALEF 191
           L   PE  GRD H    + D+   +  L  AG+ YT S     G   +F RDPD N +E 
Sbjct: 58  L---PEGPGRDDHIAFRVDDLDAFRARLKAAGVPYTESDVPGDGVRQLFVRDPDGNRIEL 114

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases. Length = 114

>gnl|CDD|216182 pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily

 Score = 63.6 bits (155), Expect = 2e-13
 Identities = 30/120 (25%), Positives = 50/120 (41%), Gaps = 5/120 (4%)

Query: 76  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPL 135
           + HV +   +LE+SL+FY ++LG ++ E     + P R A+   G  ++ L+    P P 
Sbjct: 2   IDHVALRVGDLEKSLDFYTDVLGFKLVEEVDDGEGPLRSAFFTAGGRVLELLLNETPPPA 61

Query: 136 SGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEF 191
           +              ++ DV      L  AG+           G    + RDPD N +E 
Sbjct: 62  AAGFGGHHI-AFIAFSVDDVDAAYDRLKAAGVEIVREPGRHGWGGRYSYFRDPDGNLIEL 120

Length = 120

>gnl|CDD|211348 cd06587, Glo_EDI_BRP_like, This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

 Score = 61.3 bits (149), Expect = 1e-12
 Identities = 33/118 (27%), Positives = 48/118 (40%), Gaps = 12/118 (10%)

Query: 78  HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSG 137
           HVG+   +LE ++ FY+++LG E+      D      A+L +G   + L E   P     
Sbjct: 1   HVGLTVPDLEAAVAFYEDVLGFEV---LERDGGGAEFAFLRLGGTRLELFEGDEP----- 52

Query: 138 RPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP----AIFTRDPDANALEF 191
            P  GG   H    + DV      L  AG+         P      + RDPD N +E 
Sbjct: 53  APPSGGGGVHLAFEVDDVDAAVERLKAAGVEILGGPREEPWGGRVAYFRDPDGNLIEL 110

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. Glyoxylase I catalyzes the glutathione-dependent inactivation of toxic methylglyoxal, requiring zinc or nickel ions for activity. The antibiotic resistance proteins in this family use a variety of mechanisms to block the function of antibiotics. Bleomycin resistance protein (BLMA) sequesters bleomycin's activity by directly binding to it. Whereas, three types of fosfomycin resistance proteins employ different mechanisms to render fosfomycin inactive by modifying the fosfomycin molecule. Although the proteins in this superfamily are functionally distinct, their structures are similar. The difference among the three dimensional structures of the three types of proteins in this superfamily is interesting from an evolutionary perspective. Both glyoxalase I and BLMA show domain swapping between subunits. However, there is no domain swapping for type 1 extradiol dioxygenases. Length = 110

>gnl|CDD|176702 cd08354, Glo_EDI_BRP_like_13, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 60.8 bits (148), Expect = 3e-12
 Identities = 35/116 (30%), Positives = 54/116 (46%), Gaps = 13/116 (11%)

Query: 84  ENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-AEMIHLMELPNPDPLSGR-PEH 141
           ++LE +  FY+++LGLE        K   R A+ WVG   M+ L +        G  P H
Sbjct: 9   DDLEAAEAFYEDVLGLE-----LMLKEDRRLAFFWVGGRGMLLLFDPGATSTPGGEIPPH 63

Query: 142 GGRDR-HTCIAIR--DVSKLKMILDKAGI---SYTLSKSGRPAIFTRDPDANALEF 191
           GG    H   AI   ++++ +  L+  G+   S      G  +++ RDPD N LE 
Sbjct: 64  GGSGPGHFAFAIPAEELAEWEAHLEAKGVAIESEVQWPRGGRSLYFRDPDGNLLEL 119

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 122

>gnl|CDD|223423 COG0346, GloA, Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]

 Score = 60.9 bits (147), Expect = 3e-12
 Identities = 31/136 (22%), Positives = 48/136 (35%), Gaps = 18/136 (13%)

Query: 76  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMEL------ 129
           +HHV +   +LE S++FY ++LGL + +   ++     G  L          EL      
Sbjct: 3   IHHVTLAVPDLEASIDFYTDVLGLRLVKDTVNEADDGGGYHLLFLDGDGGPGELLAFFGF 62

Query: 130 -------PNPDPLSGRPEHGGRDRHTCIAIRD---VSKLKMILDKAGISYTLSKSGRPA- 178
                     D   G P       H    + D          LD  G+   L + GR   
Sbjct: 63  EGRAGTGFVGDVALGVPGGDLGLGHLAFEVDDEAFGDAALAFLDPDGVRIELGEPGRGGV 122

Query: 179 -IFTRDPDANALEFTQ 193
            ++ RDPD   +E   
Sbjct: 123 HVYFRDPDGILIELAT 138

Length = 138

>gnl|CDD|211358 cd08352, Glo_EDI_BRP_like_1, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 58.9 bits (143), Expect = 1e-11
 Identities = 40/132 (30%), Positives = 51/132 (38%), Gaps = 22/132 (16%)

Query: 75  SVHHVGILCENLERSLEFYQNILGLEI-----NEARPHDKLPYRGAWLWVGAEMIHLMEL 129
            +HHV I+C +  RS EFY  +LGL +        R   KL         G   I L   
Sbjct: 3   GIHHVAIICSDYARSKEFYVEVLGLTLIRETYRPERKSYKLDLA----LNGEYQIELFSF 58

Query: 130 PNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGIS--------YTLSKSGRPAIFT 181
           PNP P    PE  G  RH   A+ D+      L   G+         +T    G+   F 
Sbjct: 59  PNPPPRPSYPEACGL-RHLAFAVEDIEAAVAELKAHGVEVEPIRVDEFT----GKRFTFF 113

Query: 182 RDPDANALEFTQ 193
            DPD   LE  +
Sbjct: 114 YDPDGLPLELYE 125

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping. Length = 125

>gnl|CDD|221708 pfam12681, Glyoxalase_2, Glyoxalase-like domain

 Score = 50.5 bits (121), Expect = 1e-08
 Identities = 30/115 (26%), Positives = 45/115 (39%), Gaps = 11/115 (9%)

Query: 81  ILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPE 140
           +   +LE +  FY+ +LG E+ E    +   +R   +      I L+ LP PD       
Sbjct: 1   LPVSDLEAARAFYEELLGFEVEE-EDGEYAEFRLGLVLALGGFIELIGLPEPDA------ 53

Query: 141 HGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP----AIFTRDPDANALEF 191
            GG   H    + D+  L   L  AG +        P      + RDPD N +E 
Sbjct: 54  PGGGGVHLYFEVDDLDALVARLKAAGGTILEPPEDTPWGGREFYVRDPDGNLIEL 108

This domain is related to the Glyoxalase domain pfam00903. Length = 109

>gnl|CDD|183156 PRK11478, PRK11478, putative lyase; Provisional

 Score = 49.9 bits (119), Expect = 3e-08
 Identities = 32/127 (25%), Positives = 51/127 (40%), Gaps = 6/127 (4%)

Query: 72  GVVSVHHVGILCENLERSLEFYQNILGLE-INEARPHDKLPYRGAWLWVGAEMIHLMELP 130
           G+  VHH+ I+  +   S  FY +ILG    +E     +  ++G     G  +I L   P
Sbjct: 3   GLKQVHHIAIIATDYAVSKAFYCDILGFTLQSEVYREARDSWKGDLALNGQYVIELFSFP 62

Query: 131 NPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDA 186
            P     RPE  G  RH   ++ D+      L+   +     +    + +   F  DPD 
Sbjct: 63  FPPERPSRPEACGL-RHLAFSVDDIDAAVAHLESHNVKCEAIRVDPYTQKRFTFFNDPDG 121

Query: 187 NALEFTQ 193
             LE  +
Sbjct: 122 LPLELYE 128

Length = 129

>gnl|CDD|211356 cd08346, PcpA_N_like, N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

 Score = 48.8 bits (117), Expect = 7e-08
 Identities = 30/127 (23%), Positives = 57/127 (44%), Gaps = 12/127 (9%)

Query: 76  VHHVGILCENLERSLEFYQNILGLE-----INEARPHDKLPYRGAWLWVGAEMIHLMELP 130
           +HHV ++  + + +++FY ++LGL      +N+  P     + G  L     ++   E P
Sbjct: 2   LHHVTLVTRDAQETVDFYTDVLGLRLVKKTVNQDDPGTYHLFFGDGLGSPGTLLTFFEWP 61

Query: 131 NPDPLSGRPEHGGRDRHTCIAIRDVSKL---KMILDKAGISYT--LSKSGRPAIFTRDPD 185
           +  P  GR   G    H   ++   + L   +  L  AG+  +  + + G  +++  DPD
Sbjct: 62  DAGP-KGRRGPGQI-HHIAFSVPSEASLEAWRERLRAAGVPVSGVVDRFGERSLYFEDPD 119

Query: 186 ANALEFT 192
              LE T
Sbjct: 120 GIRLELT 126

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. Length = 126

>gnl|CDD|176676 cd07253, Glo_EDI_BRP_like_2, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 45.3 bits (108), Expect = 1e-06
 Identities = 29/128 (22%), Positives = 54/128 (42%), Gaps = 15/128 (11%)

Query: 73  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 132
           +  + HV +   ++E +L+FY  +LG+E+               L  G++ I+L  +   
Sbjct: 1   IKRIDHVVLTVADIEATLDFYTRVLGMEVVRFGEEVGRKA----LRFGSQKINLHPVGGE 56

Query: 133 -DPLSGRPEHGGRDRHTCIAI-RDVSKLKMILDKAGISYTLSKSGR-------PAIFTRD 183
            +P +G P   G D   C+     + +L   L+  G+        R        +++ RD
Sbjct: 57  FEPAAGSPGP-GSD-DLCLITEPPIDELVAHLEAHGVPIEEGPVPRTGARGPITSVYFRD 114

Query: 184 PDANALEF 191
           PD N +E 
Sbjct: 115 PDGNLIEL 122

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping. Length = 125

>gnl|CDD|222305 pfam13669, Glyoxalase_4, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily

 Score = 43.4 bits (103), Expect = 6e-06
 Identities = 22/110 (20%), Positives = 39/110 (35%), Gaps = 6/110 (5%)

Query: 77  HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLS 136
           HH+GI+  +L+ +  F+ ++LGL        +      A+  +G      +EL  P    
Sbjct: 1   HHIGIVVPDLDAAAAFWVDLLGLGPWGDYRDEPQNVDLAFARLGDGPAVEVELIQPLDGE 60

Query: 137 GRPE-HGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKS-----GRPAIF 180
              +  G    H    + D+      L+  G+            GR   F
Sbjct: 61  SFLDKGGPGLHHIAYWVDDLDAAVARLEAQGVRVAPKGPRAGAAGRRVAF 110

Length = 110

>gnl|CDD|213772 TIGR03081, metmalonyl_epim, methylmalonyl-CoA epimerase

 Score = 43.5 bits (103), Expect = 7e-06
 Identities = 24/94 (25%), Positives = 48/94 (51%), Gaps = 2/94 (2%)

Query: 76  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPD-P 134
           + HVGI   +LE + +FY+++LG +++E     +   +  ++ +G   + L+E    D P
Sbjct: 2   IDHVGIAVPDLEEAAKFYEDVLGAQVSEIEELPEQGVKVVFIALGNTKVELLEPLGEDSP 61

Query: 135 LSGRPE-HGGRDRHTCIAIRDVSKLKMILDKAGI 167
           ++   E +GG   H  I + D+      L + G+
Sbjct: 62  IAKFLEKNGGGIHHIAIEVDDIEAALETLKEKGV 95

Members of this protein family are the enzyme methylmalonyl-CoA epimerase (EC 5.1.99.1), also called methylmalonyl-CoA racemase. This enzyme converts (2R)-methylmalonyl-CoA to (2S)-methylmalonyl-CoA, which is then a substrate for methylmalonyl-CoA mutase (TIGR00642). It is known in bacteria, archaea, and as a mitochondrial protein in animals. It is closely related to lactoylglutathione lyase (TIGR00068), which is also called glyoxylase I, and is also a homodimer. Length = 128

>gnl|CDD|176659 cd07233, Glyoxalase_I, Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

 Score = 42.9 bits (102), Expect = 8e-06
 Identities = 28/115 (24%), Positives = 50/115 (43%), Gaps = 10/115 (8%)

Query: 78  HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIH-LMELP-NPDPL 135
           H  +  ++LE+SL+FY ++LG+++   +   +  +   +L    E    ++EL  N    
Sbjct: 3   HTMLRVKDLEKSLDFYTDVLGMKLLRRKDFPEGKFTLVFLGYPDEDSEGVLELTYNWG-- 60

Query: 136 SGRPEHGGRD-RHTCIAIRDVSKLKMILDKAGISYT----LSKSGRPAIFTRDPD 185
           +  P   G    H   A+ DV      L++ G+  T           A F +DPD
Sbjct: 61  TEEPYDNGNGFGHLAFAVDDVYAACERLEEMGVEVTKPPGDGGMKGIA-FIKDPD 114

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic glyoxalase I uses nickel. However, eukaryotic Trypanosomatid parasites also use nickel as a cofactor, which could possibly be explained by acquiring their GLOI gene by horizontal gene transfer. Human glyoxalase I is a two-domain enzyme and it has the structure of a domain-swapped dimer with two active sites located at the dimer interface. In yeast, in various plants, insects and Plasmodia, glyoxalase I is four-domain, possibly the result of a further gene duplication and an additional gene fusing event. Length = 121

>gnl|CDD|211352 cd07255, Glo_EDI_BRP_like_12, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 40.2 bits (95), Expect = 1e-04
 Identities = 34/121 (28%), Positives = 47/121 (38%), Gaps = 28/121 (23%)

Query: 85  NLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHG-- 142
           +LERSL FYQ++LGLE+ E           A L  G     L+ L   DP +     G  
Sbjct: 12  DLERSLAFYQDVLGLEVLERTDS------TAVLGTG-GKRPLLVL-EEDPDAPPAPPGTT 63

Query: 143 GRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP-----------AIFTRDPDANALEF 191
           G   H  I +   + L   L        L + G P           A++  DP+ N +E 
Sbjct: 64  GLY-HFAILLPSRADLARAL------RRLIELGIPLEGASDHLVSEALYLSDPEGNGIEI 116

Query: 192 T 192
            
Sbjct: 117 Y 117

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 125

>gnl|CDD|211350 cd07249, MMCE, Methylmalonyl-CoA epimerase (MMCE)

 Score = 38.3 bits (90), Expect = 4e-04
 Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 5/62 (8%)

Query: 76  VHHVGILCENLERSLEFYQNILGL---EINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 132
           + H+GI   +LE +L+FY+++LG+   E  E      +  R A+L +G   I L+E  + 
Sbjct: 1   IDHIGIAVPDLEAALKFYRDVLGVGPWEREEVPSEQGV--RLAFLGLGNVQIELIEPLDD 58

Query: 133 DP 134
           D 
Sbjct: 59  DS 60

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases. Length = 128

>gnl|CDD|176705 cd08357, Glo_EDI_BRP_like_18, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 37.2 bits (87), Expect = 0.001
 Identities = 33/134 (24%), Positives = 53/134 (39%), Gaps = 31/134 (23%)

Query: 77  HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-----GAEMI-HLMELP 130
            H+ I   +LE +  FY ++LG    E R  +         WV     G +++ HL   P
Sbjct: 1   FHLAIPVRDLEAARAFYGDVLGC--KEGRSSET--------WVDFDFFGHQLVAHLS--P 48

Query: 131 NPDPLSGRPEHGGRD---RHTCIAIR--DVSKLKMILDKAGISYTLSKS----GRP---- 177
           N +  +      G      H  + +   +   L   L+ AG+ + +       G+P    
Sbjct: 49  NFNADASDNAVDGHPVPVPHFGLILSEEEFDALAERLEAAGVEFLIEPYTRFEGQPGEQE 108

Query: 178 AIFTRDPDANALEF 191
             F +DP  NALEF
Sbjct: 109 TFFLKDPSGNALEF 122

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping. Length = 125

>gnl|CDD|176666 cd07242, Glo_EDI_BRP_like_6, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 36.5 bits (85), Expect = 0.002
 Identities = 12/25 (48%), Positives = 16/25 (64%)

Query: 75 SVHHVGILCENLERSLEFYQNILGL 99
           +HHV +   +LERS  FY  +LGL
Sbjct: 1  GIHHVELTVRDLERSRAFYDWLLGL 25

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping. Length = 128

>gnl|CDD|176668 cd07244, FosA, FosA, a Fosfomycin resistance protein, catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive

 Score = 35.8 bits (83), Expect = 0.003
 Identities = 30/119 (25%), Positives = 53/119 (44%), Gaps = 16/119 (13%)

Query: 75  SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP 134
            ++H+ +   +LERS+ FY ++LG      + H +   +GA+L  G   + L    N  P
Sbjct: 1   GINHITLAVSDLERSVAFYVDLLGF-----KLHVRWD-KGAYLEAGDLWLCLSVDANVGP 54

Query: 135 LSGRPEHGGRDRHTCIAIR--DVSKLKMILDKAGI-SYTLSKSGRPAIFTRDPDANALE 190
                       H   ++   D + LK  L +AG+  +  + S   + +  DPD + LE
Sbjct: 55  AK-------DYTHYAFSVSEEDFASLKEKLRQAGVKEWKENTSEGDSFYFLDPDGHKLE 106

This subfamily family contains FosA, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosA, catalyzes the addition of glutathione to the antibiotic fosfomycin, (1R,2S)-epoxypropylphosphonic acid, making it inactive. FosA is a Mn(II) dependent enzyme. It is evolutionarily related to glyoxalase I and type I extradiol dioxygenases. Length = 121

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	196
PLN02367	233	lactoylglutathione lyase	99.86
cd08353	142	Glo_EDI_BRP_like_7 This conserved domain belongs t	99.86
PRK11478	129	putative lyase; Provisional	99.85
PLN03042	185	Lactoylglutathione lyase; Provisional	99.84
cd07241	125	Glo_EDI_BRP_like_3 This conserved domain belongs t	99.83
TIGR03645	162	glyox_marine lactoylglutathione lyase family prote	99.83
cd08352	125	Glo_EDI_BRP_like_1 This conserved domain belongs t	99.83
cd08342	136	HPPD_N_like N-terminal domain of 4-hydroxyphenylpy	99.82
cd07243	143	2_3_CTD_C C-terminal domain of catechol 2,3-dioxyg	99.81
cd07233	121	Glyoxalase_I Glyoxalase I catalyzes the isomerizat	99.81
cd07253	125	Glo_EDI_BRP_like_2 This conserved domain belongs t	99.81
TIGR03081	128	metmalonyl_epim methylmalonyl-CoA epimerase. Membe	99.81
cd07245	114	Glo_EDI_BRP_like_9 This conserved domain belongs t	99.81
TIGR00068	150	glyox_I lactoylglutathione lyase. Glyoxylase I is	99.81
cd08364	131	FosX FosX, a fosfomycin resistance protein, cataly	99.8
PRK04101	139	fosfomycin resistance protein FosB; Provisional	99.79
PRK10291	129	glyoxalase I; Provisional	99.79
PLN02300	286	lactoylglutathione lyase	99.79
cd08347	157	PcpA_C_like C-terminal domain of Sphingobium chlor	99.78
cd08363	131	FosB FosB, a fosfomycin resistance protein, cataly	99.78
cd08355	122	Glo_EDI_BRP_like_14 This conserved domain belongs	99.77
cd09014	166	BphC-JF8_C_like C-terminal, catalytic, domain of B	99.77
cd07242	128	Glo_EDI_BRP_like_6 This conserved domain belongs t	99.77
cd07257	153	THT_oxygenase_C The C-terminal domain of 2,4,5-Tri	99.77
cd07263	119	Glo_EDI_BRP_like_16 This conserved domain belongs	99.77
cd07247	114	SgaA_N_like N-terminal domain of Streptomyces gris	99.77
cd07265	122	2_3_CTD_N N-terminal domain of catechol 2,3-dioxyg	99.77
cd07255	125	Glo_EDI_BRP_like_12 This conserved domain belongs	99.77
cd07252	120	BphC1-RGP6_N_like N-terminal domain of 2,3-dihydro	99.77
cd08346	126	PcpA_N_like N-terminal domain of Sphingobium chlor	99.76
cd09011	120	Glo_EDI_BRP_like_23 This conserved domain belongs	99.76
cd08361	124	PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cuma	99.76
PF00903	128	Glyoxalase: Glyoxalase/Bleomycin resistance protei	99.76
cd09013	121	BphC-JF8_N_like N-terminal, non-catalytic, domain	99.76
cd07267	113	THT_Oxygenase_N N-terminal domain of 2,4,5-trihydr	99.76
cd07264	125	Glo_EDI_BRP_like_15 This conserved domain belongs	99.76
cd07249	128	MMCE Methylmalonyl-CoA epimerase (MMCE). MMCE, als	99.75
cd08360	134	MhqB_like_C C-terminal domain of Burkholderia sp.	99.75
cd07246	122	Glo_EDI_BRP_like_8 This conserved domain belongs t	99.75
cd08351	123	ChaP_like ChaP, an enzyme involved in the biosynth	99.75
cd08348	134	BphC2-C3-RGP6_C_like The single-domain 2,3-dihydro	99.75
cd07244	121	FosA FosA, a Fosfomycin resistance protein, cataly	99.75
cd08358	127	Glo_EDI_BRP_like_21 This conserved domain belongs	99.74
cd07256	161	HPCD_C_class_II C-terminal domain of 3,4-dihydroxy	99.74
cd07237	154	BphC1-RGP6_C_like C-terminal domain of 2,3-dihydro	99.74
cd08362	120	BphC5-RrK37_N_like N-terminal, non-catalytic, doma	99.74
cd07240	117	ED_TypeI_classII_N N-terminal domain of type I, cl	99.74
cd08345	113	Fosfomycin_RP Fosfomycin resistant protein; inhibi	99.73
cd08359	119	Glo_EDI_BRP_like_22 This conserved domain belongs	99.73
cd07239	144	BphC5-RK37_C_like C-terminal, catalytic, domain of	99.72
cd07235	122	MRD Mitomycin C resistance protein (MRD). Mitomyci	99.71
cd08354	122	Glo_EDI_BRP_like_13 This conserved domain belongs	99.71
cd08343	131	ED_TypeI_classII_C C-terminal domain of type I, cl	99.71
cd08349	112	BLMA_like Bleomycin binding protein (BLMA) and sim	99.71
cd09012	124	Glo_EDI_BRP_like_24 This conserved domain belongs	99.7
cd08350	120	BLMT_like BLMT, a bleomycin resistance protein enc	99.7
cd06587	112	Glo_EDI_BRP_like This domain superfamily is found	99.7
PRK06724	128	hypothetical protein; Provisional	99.7
cd08357	125	Glo_EDI_BRP_like_18 This conserved domain belongs	99.69
cd07266	121	HPCD_N_class_II N-terminal domain of 3,4-dihydroxy	99.69
cd08356	113	Glo_EDI_BRP_like_17 This conserved domain belongs	99.68
cd07254	120	Glo_EDI_BRP_like_20 This conserved domain belongs	99.68
cd07258	141	PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cuma	99.68
TIGR03211	303	catechol_2_3 catechol 2,3 dioxygenase. Members of	99.68
cd07262	123	Glo_EDI_BRP_like_19 This conserved domain belongs	99.67
PF12681	108	Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B	99.66
cd07238	112	Glo_EDI_BRP_like_5 This conserved domain belongs t	99.66
cd07261	114	Glo_EDI_BRP_like_11 This conserved domain belongs	99.66
TIGR02295	294	HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase. T	99.65
cd08344	112	MhqB_like_N N-terminal domain of MhqB, a type I ex	99.65
cd07251	121	Glo_EDI_BRP_like_10 This conserved domain belongs	99.65
TIGR03213	286	23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase	99.64
TIGR03213	286	23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase	99.63
TIGR03211	303	catechol_2_3 catechol 2,3 dioxygenase. Members of	99.6
KOG2944	170	consensus Glyoxalase [Carbohydrate transport and m	99.59
TIGR02295	294	HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase. T	99.59
PF13669	109	Glyoxalase_4: Glyoxalase/Bleomycin resistance prot	99.58
PLN02300	286	lactoylglutathione lyase	99.58
COG3565	138	Predicted dioxygenase of extradiol dioxygenase fam	99.46
COG3324	127	Predicted enzyme related to lactoylglutathione lya	99.42
COG2514	265	Predicted ring-cleavage extradiol dioxygenase [Gen	99.41
COG3607	133	Predicted lactoylglutathione lyase [General functi	99.41
cd07250	191	HPPD_C_like C-terminal domain of 4-hydroxyphenylpy	99.33
cd06588	128	PhnB_like Escherichia coli PhnB and similar protei	99.27
KOG2943	299	consensus Predicted glyoxalase [Carbohydrate trans	99.25
TIGR01263	353	4HPPD 4-hydroxyphenylpyruvate dioxygenase. This pr	99.21
COG0346	138	GloA Lactoylglutathione lyase and related lyases [	99.19
COG2764	136	PhnB Uncharacterized protein conserved in bacteria	99.16
TIGR01263	353	4HPPD 4-hydroxyphenylpyruvate dioxygenase. This pr	99.12
PLN02875	398	4-hydroxyphenylpyruvate dioxygenase	98.92
PRK01037	357	trmD tRNA (guanine-N(1)-)-methyltransferase/unknow	98.8
PF13468	175	Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B.	98.71
KOG2943	299	consensus Predicted glyoxalase [Carbohydrate trans	98.67
COG2514	265	Predicted ring-cleavage extradiol dioxygenase [Gen	98.58
PF14506	125	CppA_N: CppA N-terminal; PDB: 3E0R_D.	98.55
PRK10148	147	hypothetical protein; Provisional	98.51
PF14696	139	Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, H	98.36
PLN02875	398	4-hydroxyphenylpyruvate dioxygenase	98.22
COG3185	363	4-hydroxyphenylpyruvate dioxygenase and related he	98.02
KOG0638	381	consensus 4-hydroxyphenylpyruvate dioxygenase [Ami	98.02
PF06983	116	3-dmu-9_3-mt: 3-demethylubiquinone-9 3-methyltrans	97.43
COG3185	363	4-hydroxyphenylpyruvate dioxygenase and related he	97.31
PF15067	236	FAM124: FAM124 family	97.1
KOG0638	381	consensus 4-hydroxyphenylpyruvate dioxygenase [Ami	96.31
PF13669	109	Glyoxalase_4: Glyoxalase/Bleomycin resistance prot	95.88
PF14507	101	CppA_C: CppA C-terminal; PDB: 3E0R_D.	95.22
KOG2944	170	consensus Glyoxalase [Carbohydrate transport and m	94.17
cd08353	142	Glo_EDI_BRP_like_7 This conserved domain belongs t	93.7
PLN02367	233	lactoylglutathione lyase	92.28
cd07249	128	MMCE Methylmalonyl-CoA epimerase (MMCE). MMCE, als	92.14
cd08342	136	HPPD_N_like N-terminal domain of 4-hydroxyphenylpy	91.18
PRK11478	129	putative lyase; Provisional	90.79
cd08347	157	PcpA_C_like C-terminal domain of Sphingobium chlor	90.49
cd08352	125	Glo_EDI_BRP_like_1 This conserved domain belongs t	89.95
PF13670	83	PepSY_2: Peptidase propeptide and YPEB domain This	89.8
PLN03042	185	Lactoylglutathione lyase; Provisional	88.72
cd07242	128	Glo_EDI_BRP_like_6 This conserved domain belongs t	88.66
cd07268	149	Glo_EDI_BRP_like_4 This conserved domain belongs t	88.65
PF06185	185	YecM: YecM protein; InterPro: IPR010393 This famil	88.5
TIGR03645	162	glyox_marine lactoylglutathione lyase family prote	87.72
cd06587	112	Glo_EDI_BRP_like This domain superfamily is found	87.3
PRK10291	129	glyoxalase I; Provisional	87.3
TIGR03081	128	metmalonyl_epim methylmalonyl-CoA epimerase. Membe	86.9
cd08346	126	PcpA_N_like N-terminal domain of Sphingobium chlor	86.65
cd07245	114	Glo_EDI_BRP_like_9 This conserved domain belongs t	86.04
PRK11700	187	hypothetical protein; Provisional	86.01
cd07233	121	Glyoxalase_I Glyoxalase I catalyzes the isomerizat	85.47
cd07235	122	MRD Mitomycin C resistance protein (MRD). Mitomyci	85.43
cd08348	134	BphC2-C3-RGP6_C_like The single-domain 2,3-dihydro	84.95
cd07241	125	Glo_EDI_BRP_like_3 This conserved domain belongs t	84.55
PF12681	108	Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B	82.98
cd07263	119	Glo_EDI_BRP_like_16 This conserved domain belongs	82.74
cd07255	125	Glo_EDI_BRP_like_12 This conserved domain belongs	82.5
cd07252	120	BphC1-RGP6_N_like N-terminal domain of 2,3-dihydro	80.96

>PLN02367 lactoylglutathione lyase

Probab=99.86  E-value=4.5e-20  Score=147.30  Aligned_cols=122  Identities=16%  Similarity=0.227  Sum_probs=95.4

Q ss_pred             ceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeC-------------------CeEEEEEecCCCCC
Q 029285           74 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-------------------AEMIHLMELPNPDP  134 (196)
Q Consensus        74 ~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g-------------------~~~l~l~~~~~~~~  134 (196)
                      -.+.|++|+|+|++++++||+++|||++..+.+.++..+..+|+..+                   +..++|........
T Consensus        74 ~~~~HtmlRVkDle~Sl~FYt~vLGm~ll~r~d~pe~~f~lyFL~~~~~~~~p~d~~~r~~~~~~~~~~LELt~n~g~e~  153 (233)
T PLN02367         74 YIMQQTMYRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTASAPTDPTERTVWTFGQKATIELTHNWGTES  153 (233)
T ss_pred             cEEEEEEEEeCCHHHHHHHHHHhcCCEEeEEEecCCCcEEEEEeecCCccccccccccceeeccCCCCEEEEecCCCCCc
Confidence            47899999999999999999999999999887777766777777531                   24788876544321


Q ss_pred             --CCCCC--C--CCCCceEEEEEECCHHHHHHHHHHCCCeEEeeCC-C--ceEEEEEcCCCCeEEEEeec
Q 029285          135 --LSGRP--E--HGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKS-G--RPAIFTRDPDANALEFTQVD  195 (196)
Q Consensus       135 --~~~~p--~--~~~~~~hi~f~v~dl~~~~~~l~~~G~~~~~~~~-g--~~~~~~~DPdG~~iEl~e~~  195 (196)
                        .....  .  ...+.+||||.|+|+++++++|+++|+++...+. +  .+.+|++|||||.|||+|..
T Consensus       154 ~~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~erL~a~Gv~~v~~P~~g~~~riaFIkDPDGn~IEL~e~~  223 (233)
T PLN02367        154 DPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFEELGVEFVKKPNDGKMKGIAFIKDPDGYWIEIFDLK  223 (233)
T ss_pred             cccchhcccCCCCCCCceEEEEEcCCHHHHHHHHHHCCCEEEeCCccCCceEEEEEECCCCCEEEEEecc
Confidence              11111  1  1257899999999999999999999999976542 2  46789999999999999865

>cd08353 Glo_EDI_BRP_like_7 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.86  E-value=3.8e-20  Score=137.53  Aligned_cols=121  Identities=21%  Similarity=0.343  Sum_probs=90.7

Q ss_pred             eceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCC-----------CCceeEEEEe--CCeEEEEEecCCCCCCCC--
Q 029285           73 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDK-----------LPYRGAWLWV--GAEMIHLMELPNPDPLSG--  137 (196)
Q Consensus        73 i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~-----------~~~~~~~l~~--g~~~l~l~~~~~~~~~~~--  137 (196)
                      +.+++||+|.|+|+++|++||++ |||++..+....+           .....+++..  ++..++|+....+.....  
T Consensus         1 ~~~i~Hi~i~v~Dl~~s~~FY~~-LG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~iel~~~~~~~~~~~~~   79 (142)
T cd08353           1 VSRMDNVGIVVRDLEAAIAFFLE-LGLELEGRAEIEGEWADRVTGLDGVRVEIAMLRTPDGHSRLELSKFHHPAVIADHR   79 (142)
T ss_pred             CceeeeEEEEeCCHHHHHHHHHH-cCCEEccccccChHHHHHhcCCCCceEEEEEEeCCCCCceEEEEEecCCCCcCcCC
Confidence            35899999999999999999999 9999875443211           1123345543  456889987654432211  


Q ss_pred             -CCCCCCCceEEEEEECCHHHHHHHHHHCCCeEEeeC----CCceEEEEEcCCCCeEEEEee
Q 029285          138 -RPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQV  194 (196)
Q Consensus       138 -~p~~~~~~~hi~f~v~dl~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~iEl~e~  194 (196)
                       ....+.+..|+||.|+|+++++++|+++|+++..++    .+.+.+|++||||+.|||.|.
T Consensus        80 ~~~~~~~g~~hia~~v~d~d~~~~~l~~~G~~~~~~~~~~~~~~r~~~~~DPdG~~iEl~e~  141 (142)
T cd08353          80 PAPVNALGLRRVMFAVDDIDARVARLRKHGAELVGEVVQYENSYRLCYIRGPEGILIELAEQ  141 (142)
T ss_pred             CCCCCCCCceEEEEEeCCHHHHHHHHHHCCCceeCCceecCCCeEEEEEECCCCCEEEeeec
Confidence             123455788999999999999999999999986543    457889999999999999984

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>PRK11478 putative lyase; Provisional

Probab=99.85  E-value=4.9e-20  Score=134.41  Aligned_cols=122  Identities=24%  Similarity=0.380  Sum_probs=88.2

Q ss_pred             ceeceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEe-CCeEEEEEecCCCCCCCCCCCCCCCceEEE
Q 029285           71 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNPDPLSGRPEHGGRDRHTC  149 (196)
Q Consensus        71 ~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~-g~~~l~l~~~~~~~~~~~~p~~~~~~~hi~  149 (196)
                      +.+.+++||+|.|+|+++|++||+++|||++..+...+........+.. ++..++|+..+.+......+ ...+..|++
T Consensus         2 ~~i~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~-~~~g~~hi~   80 (129)
T PRK11478          2 LGLKQVHHIAIIATDYAVSKAFYCDILGFTLQSEVYREARDSWKGDLALNGQYVIELFSFPFPPERPSRP-EACGLRHLA   80 (129)
T ss_pred             CCcceecEEEEEcCCHHHHHHHHHHHhCCEecccccccccccceeeEecCCCcEEEEEEecCCCCCCCCC-CCCceeEEE
Confidence            3567899999999999999999999999998643221111111122333 44578887654332211111 234678999


Q ss_pred             EEECCHHHHHHHHHHCCCeEEee----CCCceEEEEEcCCCCeEEEEe
Q 029285          150 IAIRDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQ  193 (196)
Q Consensus       150 f~v~dl~~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdG~~iEl~e  193 (196)
                      |.|+|+++++++|+++|+++...    ..|.+.+|++|||||.|||+|
T Consensus        81 f~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iEl~~  128 (129)
T PRK11478         81 FSVDDIDAAVAHLESHNVKCEAIRVDPYTQKRFTFFNDPDGLPLELYE  128 (129)
T ss_pred             EEeCCHHHHHHHHHHcCCeeeccccCCCCCCEEEEEECCCCCEEEEEe
Confidence            99999999999999999998643    246788999999999999987

>PLN03042 Lactoylglutathione lyase; Provisional

Probab=99.84  E-value=2.2e-19  Score=139.94  Aligned_cols=123  Identities=17%  Similarity=0.220  Sum_probs=92.6

Q ss_pred             eceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEe-------------------CCeEEEEEecCCCC
Q 029285           73 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-------------------GAEMIHLMELPNPD  133 (196)
Q Consensus        73 i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~-------------------g~~~l~l~~~~~~~  133 (196)
                      --++.|++|+|.|+++|++||+++|||++..+...+...+..+|+..                   ++..++|+......
T Consensus        25 ~~~~~Ht~i~V~Dle~Si~FY~~vLG~~~~~r~~~~~~~~~~~fl~~~~~~~~~~~~~~~~~~l~~~~~~lEL~~~~~~~  104 (185)
T PLN03042         25 GYIMQQTMFRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDSETAPTDPPERTVWTFGRKATIELTHNWGTE  104 (185)
T ss_pred             CcEEEEEEEeeCCHHHHHHHHHhhcCCEEEEEEEcCCCceEEEEEecCCcccCCcchhhcccccccCCCEEEEEEcCCCc
Confidence            35799999999999999999999999999887655454455555542                   23478888654332


Q ss_pred             CCC------CCCCCCCCceEEEEEECCHHHHHHHHHHCCCeEEeeCC---CceEEEEEcCCCCeEEEEeec
Q 029285          134 PLS------GRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKS---GRPAIFTRDPDANALEFTQVD  195 (196)
Q Consensus       134 ~~~------~~p~~~~~~~hi~f~v~dl~~~~~~l~~~G~~~~~~~~---g~~~~~~~DPdG~~iEl~e~~  195 (196)
                      ..+      ..+..+.++.|++|.|+|+++++++|+++|+.+...+.   +.+.+|++|||||.|||++..
T Consensus       105 ~~p~~~~~~~~~~~~~G~~Hlaf~V~Dvd~~~~~L~~~Gv~v~~~p~~~~~~~~~fi~DPdG~~IEl~e~~  175 (185)
T PLN03042        105 SDPEFKGYHNGNSDPRGFGHIGITVDDVYKACERFEKLGVEFVKKPDDGKMKGLAFIKDPDGYWIEIFDLK  175 (185)
T ss_pred             ccccccccccCCCCCCCccEEEEEcCCHHHHHHHHHHCCCeEEeCCccCCceeEEEEECCCCCEEEEEECC
Confidence            110      01112347899999999999999999999999875442   346688899999999999864

>cd07241 Glo_EDI_BRP_like_3 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.83  E-value=1.7e-19  Score=130.18  Aligned_cols=117  Identities=23%  Similarity=0.318  Sum_probs=85.7

Q ss_pred             eeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeC-CeEEEEEecCCCCCCCCCCCCCCCceEEEEEEC
Q 029285           75 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-AEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR  153 (196)
Q Consensus        75 ~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g-~~~l~l~~~~~~~~~~~~p~~~~~~~hi~f~v~  153 (196)
                      +++||+|.|+|++++++||+++|||++..+...+...+...|+..+ +..++|+..+...... ......+..|+||.|+
T Consensus         1 ~~~Hi~l~v~dl~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~g~~hi~f~v~   79 (125)
T cd07241           1 KIEHVAIWTKDLERMKAFYVTYFGATSNEKYHNPRKGFESYFLSFDDGARLELMTRPDIAPSP-NEGERTGWAHLAFSVG   79 (125)
T ss_pred             CceEEEEEecCHHHHHHHHHHHhCCEeeceEeCCCCCceEEEEecCCCcEEEEEcCcccCCCc-ccCCCCceEEEEEECC
Confidence            4789999999999999999999999986543322333445677664 4578888644322111 1123346789999996


Q ss_pred             ---CHHHHHHHHHHCCCeEEeeC----CCceEEEEEcCCCCeEEEE
Q 029285          154 ---DVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFT  192 (196)
Q Consensus       154 ---dl~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~iEl~  192 (196)
                         ++++++++|+++|+++...+    .|.+.++++|||||.|||.
T Consensus        80 ~~~~v~~~~~~l~~~g~~~~~~~~~~~~g~~~~~~~DPdG~~iE~~  125 (125)
T cd07241          80 SKEAVDELTERLRADGYLIIGEPRTTGDGYYESVILDPEGNRIEIT  125 (125)
T ss_pred             CHHHHHHHHHHHHHCCCEEEeCceecCCCeEEEEEECCCCCEEEeC
Confidence               58999999999999987643    3456688999999999983

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>TIGR03645 glyox_marine lactoylglutathione lyase family protein

Probab=99.83  E-value=2.5e-19  Score=136.95  Aligned_cols=122  Identities=22%  Similarity=0.272  Sum_probs=90.2

Q ss_pred             ceeeEEEEEcCCHHHHHHHHHhccCCEEeeec----CC--------------CCCCceeEEEEeC-CeEEEEEecCCCCC
Q 029285           74 VSVHHVGILCENLERSLEFYQNILGLEINEAR----PH--------------DKLPYRGAWLWVG-AEMIHLMELPNPDP  134 (196)
Q Consensus        74 ~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~----~~--------------~~~~~~~~~l~~g-~~~l~l~~~~~~~~  134 (196)
                      .+++||+|.|.|+++|++||+++|||++..+.    +.              .......+++..+ +..++|++...+..
T Consensus         3 ~~i~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ieL~~~~~~~~   82 (162)
T TIGR03645         3 RTFSHIGISVPDLDAAVKFYTEVLGWYLIMPPTEIVEDDSAIGEMCTDVFGEGWGSFKIAHLSTGDRIGVELFEFKNQEN   82 (162)
T ss_pred             ceEEEEEEEeCCHHHHHHHHHHhcCCEEEeccccccCCCCCCCchhhHHhCCCcceeeEEEEecCCCCcEEEEeccCCCC
Confidence            57999999999999999999999999875321    11              0112445667655 45799998765433


Q ss_pred             CCCC-CCCCCCceEEEEEECCHHHHHHHHHHCCCeEEeeC-----C---CceEEEEEcCCCCeEEEEeec
Q 029285          135 LSGR-PEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK-----S---GRPAIFTRDPDANALEFTQVD  195 (196)
Q Consensus       135 ~~~~-p~~~~~~~hi~f~v~dl~~~~~~l~~~G~~~~~~~-----~---g~~~~~~~DPdG~~iEl~e~~  195 (196)
                      +... ...+.+..|+||.|+|+++++++|+++|+.+....     .   +.+.+|++|||||.|||++.+
T Consensus        83 ~~~~~~~~~~g~~Hla~~v~dida~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~  152 (162)
T TIGR03645        83 PEDNFEYWKTGVFHFCVQDPDVEGLAERIVAAGGKKRMPVPRYYYPGEKPYRMIYMEDPFGNILEIYSHS  152 (162)
T ss_pred             CCcccccccccceEEEEEcCCHHHHHHHHHHcCCcccCCCccccCCCCCceEEEEEECCCCCEEEEEEcC
Confidence            2221 12346789999999999999999999998753321     1   247899999999999999864

Members of this protein family share homology with lactoylglutathione lyase (glyoxalase I) and are found mainly in marine members of the gammaproteobacteria, including CPS_0532 from Colwellia psychrerythraea 34H. This family excludes a well-separated, more narrowly distributed paralogous family, exemplified by CPS_3492 from C. psychrerythraea. The function is of this protein family is unknown.

>cd08352 Glo_EDI_BRP_like_1 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.83  E-value=3.4e-19  Score=128.31  Aligned_cols=119  Identities=27%  Similarity=0.453  Sum_probs=87.2

Q ss_pred             ceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEe-CCeEEEEEecCCCCCCCCCCCCCCCceEEEEEE
Q 029285           74 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  152 (196)
Q Consensus        74 ~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~-g~~~l~l~~~~~~~~~~~~p~~~~~~~hi~f~v  152 (196)
                      .+++||+|.|.|++++++||+++|||++...............+.. ++..++++...........+ .+.+..|++|.|
T Consensus         2 ~~~~hi~l~v~d~~~a~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~-~~~g~~h~~~~v   80 (125)
T cd08352           2 FGIHHVAIICSDYEKSKEFYVEILGFKVIREVYRPERGSYKLDLLLNGGYQLELFSFPNPPERPSYP-EACGLRHLAFSV   80 (125)
T ss_pred             CccceEEEEcCCHHHHHHHHHHhcCCEEeeeeecCCCCcEEEEEecCCCcEEEEEEcCCCCCCCCCC-cCCCceEEEEEe
Confidence            5789999999999999999999999998765322221111223333 45677777654332211112 235678999999


Q ss_pred             CCHHHHHHHHHHCCCeEEeeC----CCceEEEEEcCCCCeEEEEe
Q 029285          153 RDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQ  193 (196)
Q Consensus       153 ~dl~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~iEl~e  193 (196)
                      +|+++++++++++|+++...+    .+.+.+|++||+||.|||+|
T Consensus        81 ~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DP~G~~iEl~~  125 (125)
T cd08352          81 EDIEAAVKHLKAKGVEVEPIRVDEFTGKRFTFFYDPDGLPLELYE  125 (125)
T ss_pred             CCHHHHHHHHHHcCCccccccccCCCceEEEEEECCCCCEEEecC
Confidence            999999999999999886532    35678999999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08342 HPPD_N_like N-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HPPD) and hydroxymandelate Synthase (HmaS)

Probab=99.82  E-value=3.1e-19  Score=132.25  Aligned_cols=118  Identities=12%  Similarity=0.039  Sum_probs=89.2

Q ss_pred             eeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCeEEEEEecCCCCCCCC--CCCCCCCceEEEEEEC
Q 029285           76 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSG--RPEHGGRDRHTCIAIR  153 (196)
Q Consensus        76 l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~--~p~~~~~~~hi~f~v~  153 (196)
                      ++|++|.|.|++++++||+++|||++......+  .....++..++..+.|...........  ....+.+..|++|.|+
T Consensus         1 ~~Hi~i~V~D~e~s~~FY~~vLGf~~~~~~~~~--~~~~~~~~~g~~~l~l~~~~~~~~~~~~~~~~~~~g~~hia~~V~   78 (136)
T cd08342           1 FDHVEFYVGNAKQLASWFSTKLGFEPVAYHGSE--DKASYLLRQGDINFVLNSPLNSFAPVADFLEKHGDGVCDVAFRVD   78 (136)
T ss_pred             CeEEEEEeCCHHHHHHHHHHhcCCeEEEecCCC--ceEEEEEEcCCEEEEEecCCCCCCchHHHHHhcCCceEEEEEEeC
Confidence            589999999999999999999999998754432  123355555666777665433221111  1224567789999999


Q ss_pred             CHHHHHHHHHHCCCeEEeeC----CCceEEEEEcCCCCeEEEEeec
Q 029285          154 DVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQVD  195 (196)
Q Consensus       154 dl~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~iEl~e~~  195 (196)
                      |+++++++|+++|+++..++    .+.+.++++||||+.|||.|..
T Consensus        79 Dvda~~~~l~~~G~~v~~~p~~~~~~~~~~~i~dp~G~~ie~~~~~  124 (136)
T cd08342          79 DAAAAYERAVARGAKPVQEPVEEPGELKIAAIKGYGDSLHTLVDRK  124 (136)
T ss_pred             CHHHHHHHHHHcCCeEccCceecCCeEEEEEEeccCCcEEEEEecC
Confidence            99999999999999996443    4568999999999999999964

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of HPP to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two, instead of three, su

>cd07243 2_3_CTD_C C-terminal domain of catechol 2,3-dioxygenase

Probab=99.81  E-value=1.1e-18  Score=130.71  Aligned_cols=114  Identities=17%  Similarity=0.252  Sum_probs=82.9

Q ss_pred             ceeceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCC-ceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEE
Q 029285           71 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLP-YRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTC  149 (196)
Q Consensus        71 ~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~-~~~~~l~~g~~~l~l~~~~~~~~~~~~p~~~~~~~hi~  149 (196)
                      +.+.+++||+|.|+|++++++||+++|||++..+...+... ....|+..+.. .+.......      |  +++.+|+|
T Consensus         2 ~~~~~l~Hv~l~v~Dle~s~~FY~~vLGf~~~~~~~~~~~~~~~~~~l~~~~~-~h~~~~~~~------~--~~~~~Hia   72 (143)
T cd07243           2 IGAHRLDHCLLTGEDIAETTRFFTDVLDFYLAERVVDPDGGTRVGSFLSCSNK-PHDIAFVGG------P--DGKLHHFS   72 (143)
T ss_pred             CCCceeCEEEEecCCHHHHHHHHHHhcCCEEEEEEecCCCCeEEEEEEecCCC-cceEEEecC------C--CCCceEEE
Confidence            34678999999999999999999999999987654322211 23567765443 222222111      1  24678999


Q ss_pred             EEECCHHH---HHHHHHHCCCeEEeeC-----CCceEEEEEcCCCCeEEEEe
Q 029285          150 IAIRDVSK---LKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQ  193 (196)
Q Consensus       150 f~v~dl~~---~~~~l~~~G~~~~~~~-----~g~~~~~~~DPdG~~iEl~e  193 (196)
                      |.|+|+++   +.++|+++|+++...+     .+++.+||+|||||.|||.+
T Consensus        73 f~v~d~~~l~~~~~~l~~~Gv~i~~~p~~~~~~~~~~~yf~DPdG~~iEl~~  124 (143)
T cd07243          73 FFLESWEDVLKAGDIISMNDVSIDIGPTRHGITRGQTIYFFDPSGNRNETFA  124 (143)
T ss_pred             EEcCCHHHHHHHHHHHHHcCCceEECCcCCCCCCceEEEEECCCCCEEEEec
Confidence            99999887   5689999999986543     23578999999999999975

This subfamily contains the C-terminal, catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the C-terminal domain.

>cd07233 Glyoxalase_I Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

Probab=99.81  E-value=1.6e-18  Score=124.66  Aligned_cols=114  Identities=21%  Similarity=0.315  Sum_probs=86.5

Q ss_pred             eeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCC----eEEEEEecCCCCCCCCCCCCCCCceEEEEE
Q 029285           76 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA----EMIHLMELPNPDPLSGRPEHGGRDRHTCIA  151 (196)
Q Consensus        76 l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~----~~l~l~~~~~~~~~~~~p~~~~~~~hi~f~  151 (196)
                      +.||+|.|+|+++|++||+++|||++....+.++.....+|+..++    ..+++........   ....+.+..|++|.
T Consensus         1 ~~hv~i~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~---~~~~~~~~~~i~~~   77 (121)
T cd07233           1 FLHTMLRVKDLEKSLDFYTDVLGMKLLRRKDFPEGKFTLVFLGYPDEDSEGVLELTYNWGTEE---PYDNGNGFGHLAFA   77 (121)
T ss_pred             CeeEEEEecCcHHHHHHHHhccCCeEEEEEecCCCceEEEEecCCCCCCccEEEEEecCCCCC---CcCCCCCeEEEEEE
Confidence            5799999999999999999999999887544333334556777654    4566654322211   11223467899999


Q ss_pred             ECCHHHHHHHHHHCCCeEEeeC---CCceEEEEEcCCCCeEEEE
Q 029285          152 IRDVSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFT  192 (196)
Q Consensus       152 v~dl~~~~~~l~~~G~~~~~~~---~g~~~~~~~DPdG~~iEl~  192 (196)
                      ++|+++++++++++|+.+...+   .+++.+|++|||||+|||+
T Consensus        78 v~did~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DpdG~~iE~~  121 (121)
T cd07233          78 VDDVYAACERLEEMGVEVTKPPGDGGMKGIAFIKDPDGYWIELI  121 (121)
T ss_pred             eCCHHHHHHHHHHCCCEEeeCCccCCCceEEEEECCCCCEEEeC
Confidence            9999999999999999997664   3467899999999999984

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic gly

>cd07253 Glo_EDI_BRP_like_2 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.81  E-value=1.8e-18  Score=124.50  Aligned_cols=117  Identities=21%  Similarity=0.373  Sum_probs=88.3

Q ss_pred             eceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEEEE
Q 029285           73 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  152 (196)
Q Consensus        73 i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~p~~~~~~~hi~f~v  152 (196)
                      +.+++|+.|.|.|++++++||+++|||++....+..    ...++..++..+++......... .....+.+..|++|.+
T Consensus         1 ~~~l~hi~l~v~d~~~s~~Fy~~~lG~~~~~~~~~~----~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~hi~~~~   75 (125)
T cd07253           1 IKRIDHVVLTVADIEATLDFYTRVLGMEVVRFGEEV----GRKALRFGSQKINLHPVGGEFEP-AAGSPGPGSDDLCLIT   75 (125)
T ss_pred             CcccceEEEEecCHHHHHHHHHHHhCceeecccccC----CceEEEeCCEEEEEecCCCccCc-CccCCCCCCceEEEEe
Confidence            357899999999999999999999999988654321    23456677777777764432211 1122345678999999


Q ss_pred             CC-HHHHHHHHHHCCCeEEeeC-------CCceEEEEEcCCCCeEEEEee
Q 029285          153 RD-VSKLKMILDKAGISYTLSK-------SGRPAIFTRDPDANALEFTQV  194 (196)
Q Consensus       153 ~d-l~~~~~~l~~~G~~~~~~~-------~g~~~~~~~DPdG~~iEl~e~  194 (196)
                      ++ +++++++|+++|+++...+       .+++.+||+|||||.|||.++
T Consensus        76 ~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~ve~~~~  125 (125)
T cd07253          76 EPPIDELVAHLEAHGVPIEEGPVPRTGARGPITSVYFRDPDGNLIELSNY  125 (125)
T ss_pred             cccHHHHHHHHHHCCceeecCcccccCCCCCccEEEEECCCCCEEEeeeC
Confidence            84 9999999999999885432       125789999999999999874

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>TIGR03081 metmalonyl_epim methylmalonyl-CoA epimerase

Probab=99.81  E-value=4.6e-19  Score=128.71  Aligned_cols=119  Identities=20%  Similarity=0.400  Sum_probs=88.4

Q ss_pred             eeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCeEEEEEecCCCCCCCC--CCCCCCCceEEEEEE
Q 029285           75 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSG--RPEHGGRDRHTCIAI  152 (196)
Q Consensus        75 ~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~--~p~~~~~~~hi~f~v  152 (196)
                      +++|++|.|+|++++++||+++|||++....+........+++..++..++|...........  ....+.+..|+||.|
T Consensus         1 ~i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~g~~~i~~~v   80 (128)
T TIGR03081         1 RIDHVGIAVPDLEEAAKLYEDVLGAHVSHIEEVPEQGVKVVFIALGNTKVELLEPLGEDSPIAKFLEKNGGGIHHIAIEV   80 (128)
T ss_pred             CCCEEEEEeCCHHHHHHHHHHHhCCCCccceeCCCCCcEEEEEecCCEEEEEEecCCCCChHHHHHhcCCCceEEEEEEc
Confidence            478999999999999999999999998764333333445677777878888876432211111  012245678999999


Q ss_pred             CCHHHHHHHHHHCCCeEEee-C----CCceEEEE--EcCCCCeEEEEe
Q 029285          153 RDVSKLKMILDKAGISYTLS-K----SGRPAIFT--RDPDANALEFTQ  193 (196)
Q Consensus       153 ~dl~~~~~~l~~~G~~~~~~-~----~g~~~~~~--~DPdG~~iEl~e  193 (196)
                      +|+++++++|+++|+++..+ +    .|.+.+|+  +||||+.||+.|
T Consensus        81 ~di~~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~~~~dp~G~~~E~~~  128 (128)
T TIGR03081        81 DDIEAALETLKEKGVRLIDEEPRIGAGGKPVAFLHPKSTGGVLIELEE  128 (128)
T ss_pred             CCHHHHHHHHHHCCCcccCCCCccCCCCCEEEEecccccCcEEEEecC
Confidence            99999999999999988643 2    23455666  799999999976

Members of this protein family are the enzyme methylmalonyl-CoA epimerase (EC 5.1.99.1), also called methylmalonyl-CoA racemase. This enzyme converts (2R)-methylmalonyl-CoA to (2S)-methylmalonyl-CoA, which is then a substrate for methylmalonyl-CoA mutase (TIGR00642). It is known in bacteria, archaea, and as a mitochondrial protein in animals. It is closely related to lactoylglutathione lyase (TIGR00068), which is also called glyoxylase I, and is also a homodimer.

>cd07245 Glo_EDI_BRP_like_9 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.81  E-value=9.3e-19  Score=123.40  Aligned_cols=110  Identities=40%  Similarity=0.745  Sum_probs=86.5

Q ss_pred             eeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCe-EEEEEecCCCCCCCCCCCCCCCceEEEEEECC
Q 029285           76 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE-MIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD  154 (196)
Q Consensus        76 l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~-~l~l~~~~~~~~~~~~p~~~~~~~hi~f~v~d  154 (196)
                      ++|++|.|.|++++++||+++|||++..+....   ...+|+..++. .+++...+.....   +..+++..|++|.|+|
T Consensus         1 i~Hi~l~v~d~~~~~~FY~~~lG~~~~~~~~~~---~~~~~~~~~~~~~i~l~~~~~~~~~---~~~~~~~~~~~~~v~d   74 (114)
T cd07245           1 LDHVALRVPDLEASRAFYTDVLGLEEGPRPPFL---FPGAWLYAGDGPQLHLIEEDPPDAL---PEGPGRDDHIAFRVDD   74 (114)
T ss_pred             CCeEEEecCCHHHHHHHHHHccCCcccCcCCCC---CCceEEEeCCCcEEEEEecCCCccc---cCCCcccceEEEEeCC
Confidence            589999999999999999999999987543321   23477877765 7788765443221   2233466899999999


Q ss_pred             HHHHHHHHHHCCCeEEeeC---CCceEEEEEcCCCCeEEE
Q 029285          155 VSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEF  191 (196)
Q Consensus       155 l~~~~~~l~~~G~~~~~~~---~g~~~~~~~DPdG~~iEl  191 (196)
                      +++++++++++|+++...+   .+.+.+++.||+||.|||
T Consensus        75 ~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~DP~G~~iE~  114 (114)
T cd07245          75 LDAFRARLKAAGVPYTESDVPGDGVRQLFVRDPDGNRIEL  114 (114)
T ss_pred             HHHHHHHHHHcCCCcccccCCCCCccEEEEECCCCCEEeC
Confidence            9999999999999986654   457889999999999996

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases.

>TIGR00068 glyox_I lactoylglutathione lyase

Probab=99.81  E-value=1.2e-18  Score=131.12  Aligned_cols=120  Identities=23%  Similarity=0.334  Sum_probs=86.6

Q ss_pred             eeceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCe----EEEEEecCCCCCCCCCCCCCCCceE
Q 029285           72 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE----MIHLMELPNPDPLSGRPEHGGRDRH  147 (196)
Q Consensus        72 ~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~----~l~l~~~~~~~~~~~~p~~~~~~~h  147 (196)
                      ..++++||.|.|.|+++|++||+++|||++..+.+.....+..+|+..++.    .+++.......    ....+.+..|
T Consensus        14 ~~~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~----~~~~~~g~~h   89 (150)
T TIGR00068        14 KKRRLLHTMLRVGDLDKSLDFYTEVLGMKLLRKRDFPEMKFSLAFLGYGDETSAAVIELTHNWGTE----KYDLGNGFGH   89 (150)
T ss_pred             CCceEEEEEEEecCHHHHHHHHHHhcCCEEEEEeccCCCceEEEEecCCCCCCccEEEEeecCCCC----cccCCCceeE
Confidence            357899999999999999999999999998765543333334455554421    23332211111    1122346789


Q ss_pred             EEEEECCHHHHHHHHHHCCCeEEeeC-----CCceEEEEEcCCCCeEEEEeec
Q 029285          148 TCIAIRDVSKLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQVD  195 (196)
Q Consensus       148 i~f~v~dl~~~~~~l~~~G~~~~~~~-----~g~~~~~~~DPdG~~iEl~e~~  195 (196)
                      ++|.|+|+++++++|.++|+++..++     .+.+.+||+|||||.|||++..
T Consensus        90 i~f~v~dld~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  142 (150)
T TIGR00068        90 IAIGVDDVYKACERVRALGGNVVREPGPVKGGTTVIAFVEDPDGYKIELIQRK  142 (150)
T ss_pred             EEEecCCHHHHHHHHHHcCCccccCCcccCCCceEEEEEECCCCCEEEEEECC
Confidence            99999999999999999999876543     2246789999999999999864

Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits this model twice.

>cd08364 FosX FosX, a fosfomycin resistance protein, catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1

Probab=99.80  E-value=3.4e-18  Score=125.93  Aligned_cols=114  Identities=17%  Similarity=0.289  Sum_probs=85.5

Q ss_pred             eceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCC-ceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEEE
Q 029285           73 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLP-YRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIA  151 (196)
Q Consensus        73 i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~-~~~~~l~~g~~~l~l~~~~~~~~~~~~p~~~~~~~hi~f~  151 (196)
                      +.+++||+|.|+|++++++||+++|||++..+.+..... ....|+..++..+++.....+        ..++.+|++|.
T Consensus         2 i~~i~hv~l~V~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~--------~~~~~~Hiaf~   73 (131)
T cd08364           2 IEGLSHITLIVKDLNKTTAFLQNIFNAREVYSSGDKTFSLSKEKFFLIGGLWIAIMEGDSL--------QERTYNHIAFK   73 (131)
T ss_pred             cccEeEEEEEeCCHHHHHHHHHHHhCCeeEEecccccccccceeEEEcCCeEEEEecCCCC--------CCCCceEEEEE
Confidence            568999999999999999999999999886653322111 112345566667776532221        12357899999


Q ss_pred             EC--CHHHHHHHHHHCCCeEEeeC---C-CceEEEEEcCCCCeEEEEee
Q 029285          152 IR--DVSKLKMILDKAGISYTLSK---S-GRPAIFTRDPDANALEFTQV  194 (196)
Q Consensus       152 v~--dl~~~~~~l~~~G~~~~~~~---~-g~~~~~~~DPdG~~iEl~e~  194 (196)
                      |+  ++++++++|+++|+++....   . +++.+||+|||||.|||.+.
T Consensus        74 v~~~~ld~~~~~l~~~gv~~~~~~~~~~~~g~~~yf~DPdG~~iEl~~~  122 (131)
T cd08364          74 ISDSDVDEYTERIKALGVEMKPPRPRVQGEGRSIYFYDFDNHLFELHTG  122 (131)
T ss_pred             cCHHHHHHHHHHHHHCCCEEecCCccccCCceEEEEECCCCCEEEEecC
Confidence            98  79999999999999886542   2 36899999999999999864

This subfamily family contains FosX, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of the configuration at C1 in the presence of Mn(II). The hydrated fosfomycin loses the inhibition activity. FosX is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>PRK04101 fosfomycin resistance protein FosB; Provisional

Probab=99.79  E-value=5.3e-18  Score=126.06  Aligned_cols=112  Identities=23%  Similarity=0.374  Sum_probs=87.3

Q ss_pred             eceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEEEE
Q 029285           73 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  152 (196)
Q Consensus        73 i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~p~~~~~~~hi~f~v  152 (196)
                      +.+++|+.|.|+|++++++||+++|||++..+.+      ..+++..++..+.+...+...    ......+..|++|.+
T Consensus         2 i~~i~hi~L~v~Dl~~s~~FY~~~lG~~~~~~~~------~~~~~~~~g~~l~l~~~~~~~----~~~~~~~~~hiaf~v   71 (139)
T PRK04101          2 LKGINHICFSVSNLEKSIEFYEKVLGAKLLVKGR------KTAYFDLNGLWIALNEEKDIP----RNEIHQSYTHIAFSI   71 (139)
T ss_pred             CCcEEEEEEEecCHHHHHHHHHhccCCEEEeecC------eeEEEecCCeEEEeeccCCCC----CccCCCCeeEEEEEe
Confidence            5689999999999999999999999999875422      246777777777765432211    111234568999999


Q ss_pred             C--CHHHHHHHHHHCCCeEEeeC----CCceEEEEEcCCCCeEEEEee
Q 029285          153 R--DVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQV  194 (196)
Q Consensus       153 ~--dl~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~iEl~e~  194 (196)
                      +  |+++++++|+++|+++...+    .+++.+|++|||||.|||.+-
T Consensus        72 ~~~dv~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~DPdGn~iEl~~~  119 (139)
T PRK04101         72 EEEDFDHWYQRLKENDVNILPGRERDERDKKSIYFTDPDGHKFEFHTG  119 (139)
T ss_pred             cHHHHHHHHHHHHHCCceEcCCccccCCCceEEEEECCCCCEEEEEeC
Confidence            8  99999999999999986432    357999999999999999864

>PRK10291 glyoxalase I; Provisional

Probab=99.79  E-value=2.3e-18  Score=126.17  Aligned_cols=112  Identities=22%  Similarity=0.354  Sum_probs=82.4

Q ss_pred             EEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCe----EEEEEecCCCCCCCCCCCCCCCceEEEEEECCH
Q 029285           80 GILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE----MIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDV  155 (196)
Q Consensus        80 ~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~----~l~l~~~~~~~~~~~~p~~~~~~~hi~f~v~dl  155 (196)
                      +|.|.|+++|++||+++|||++..+...+...+..+|+..++.    .+++..... .   .....+.+.+|+||.|+|+
T Consensus         1 ~l~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~---~~~~~g~~~~hlaf~V~d~   76 (129)
T PRK10291          1 MLRVGDLQRSIDFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWG-V---DKYELGTAYGHIALSVDNA   76 (129)
T ss_pred             CEEecCHHHHHHHHHhccCCEEEEeecCCCCcEEEEEEccCCCCCcceEEeeecCC-C---CCCcCCCCeeEEEEEeCCH
Confidence            4789999999999999999998876555555556777765532    344432111 1   1122345788999999999


Q ss_pred             HHHHHHHHHCCCeEEeeC----CC-ceEEEEEcCCCCeEEEEeec
Q 029285          156 SKLKMILDKAGISYTLSK----SG-RPAIFTRDPDANALEFTQVD  195 (196)
Q Consensus       156 ~~~~~~l~~~G~~~~~~~----~g-~~~~~~~DPdG~~iEl~e~~  195 (196)
                      ++++++|+++|+++..++    .+ .+.+|++|||||.|||.+..
T Consensus        77 ~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~i~DPdG~~iel~~~~  121 (129)
T PRK10291         77 AEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEK  121 (129)
T ss_pred             HHHHHHHHHcCCccccCCcccCCCceEEEEEECCCCCEEEEEEcc
Confidence            999999999999886432    33 35688999999999999853

>PLN02300 lactoylglutathione lyase

Probab=99.79  E-value=4.1e-18  Score=141.30  Aligned_cols=123  Identities=25%  Similarity=0.335  Sum_probs=91.8

Q ss_pred             CCceeceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCe----EEEEEecCCCCCCCCCCCCCCC
Q 029285           69 IDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE----MIHLMELPNPDPLSGRPEHGGR  144 (196)
Q Consensus        69 ~~~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~----~l~l~~~~~~~~~~~~p~~~~~  144 (196)
                      .-+.+.+++|++|.|+|++++++||+++|||++..+...+...+..+|+..++.    .+++......    .....+.+
T Consensus        18 ~~~~i~~l~Hv~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~----~~~~~~~g   93 (286)
T PLN02300         18 PKKDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSNFVVELTYNYGV----DKYDIGTG   93 (286)
T ss_pred             CccccceEEEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCcEEEEEEccCCCCCceEEEEeccCCC----CccccCCC
Confidence            336789999999999999999999999999999875443344445677765432    3444322111    11223457


Q ss_pred             ceEEEEEECCHHHHHHHHHHCCCeEEeeC----CC-ceEEEEEcCCCCeEEEEeec
Q 029285          145 DRHTCIAIRDVSKLKMILDKAGISYTLSK----SG-RPAIFTRDPDANALEFTQVD  195 (196)
Q Consensus       145 ~~hi~f~v~dl~~~~~~l~~~G~~~~~~~----~g-~~~~~~~DPdG~~iEl~e~~  195 (196)
                      ..|++|.|+|+++++++++++|+++...+    .+ .+.+|++|||||.|||++..
T Consensus        94 ~~hia~~v~dvd~~~~~l~~~G~~i~~~~~~~~~g~~~~~~~~DPdG~~iEl~~~~  149 (286)
T PLN02300         94 FGHFGIAVEDVAKTVELVKAKGGKVTREPGPVKGGKSVIAFVKDPDGYKFELIQRG  149 (286)
T ss_pred             ccEEEEEeCCHHHHHHHHHHCCCeeecCCcccCCCceEEEEEECCCCCEEEEEeCC
Confidence            78999999999999999999999886543    22 46789999999999999864

>cd08347 PcpA_C_like C-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=99.78  E-value=7.6e-18  Score=128.15  Aligned_cols=113  Identities=19%  Similarity=0.300  Sum_probs=85.1

Q ss_pred             eeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeC---CeEEEEEecCCCCCCCCCCCCCCCceEEEEE
Q 029285           75 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG---AEMIHLMELPNPDPLSGRPEHGGRDRHTCIA  151 (196)
Q Consensus        75 ~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g---~~~l~l~~~~~~~~~~~~p~~~~~~~hi~f~  151 (196)
                      +++||+|.|+|+++|++||+++|||++..+.+     ....|+..+   +..++|+......  ...+ ..+++.|++|.
T Consensus         1 gl~HI~i~V~Dle~s~~FY~~~LG~~~~~~~~-----~~~~~~~~~~~~~~~l~l~~~~~~~--~~~~-~~~~l~Hiaf~   72 (157)
T cd08347           1 GLHGVTLTVRDPEATAAFLTDVLGFREVGEEG-----DRVRLEEGGGGPGAVVDVLEEPDQP--RGRP-GAGTVHHVAFR   72 (157)
T ss_pred             CcccEEEEeCCHHHHHHHHHHhcCCEEEeeeC-----CEEEEEecCCCCCCEEEEEeCCCCC--CCcc-cCCceEEEEEE
Confidence            57999999999999999999999999986543     123455544   5677777643211  1111 22467899999


Q ss_pred             ECC---HHHHHHHHHHCCCeEEeeC--CCceEEEEEcCCCCeEEEEeec
Q 029285          152 IRD---VSKLKMILDKAGISYTLSK--SGRPAIFTRDPDANALEFTQVD  195 (196)
Q Consensus       152 v~d---l~~~~~~l~~~G~~~~~~~--~g~~~~~~~DPdG~~iEl~e~~  195 (196)
                      |+|   +++++++|+++|+.+....  .+.+.+||+|||||.|||.+..
T Consensus        73 v~d~~dvd~~~~~L~~~Gv~~~~~~~~~~~~s~yf~DPdG~~iEl~~~~  121 (157)
T cd08347          73 VPDDEELEAWKERLEALGLPVSGIVDRFYFKSLYFREPGGILFEIATDG  121 (157)
T ss_pred             CCCHHHHHHHHHHHHHCCCCcccccccccEEEEEEECCCCcEEEEEECC
Confidence            998   8999999999999765432  2357899999999999999865

The C-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd08363 FosB FosB, a fosfomycin resistance protein, catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin

Probab=99.78  E-value=4.7e-18  Score=125.26  Aligned_cols=110  Identities=23%  Similarity=0.399  Sum_probs=85.4

Q ss_pred             eeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEEEEC--
Q 029285           76 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR--  153 (196)
Q Consensus        76 l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~p~~~~~~~hi~f~v~--  153 (196)
                      ++||.|.|+|++++++||+++|||++..+.+      ..+++..++..+.+...+...    .....++.+|++|.++  
T Consensus         1 i~HV~l~V~Dl~~a~~FY~~~LG~~~~~~~~------~~~~~~~~~~~l~l~~~~~~~----~~~~~~~~~hiaf~v~~~   70 (131)
T cd08363           1 INHMTFSVSNLDKSISFYKHVFMEKLLVLGE------KTAYFTIGGTWLALNEEPDIP----RNEIRQSYTHIAFTIEDS   70 (131)
T ss_pred             CceEEEEECCHHHHHHHHHHhhCCEEeccCC------ccceEeeCceEEEEEccCCCC----cCCcCccceEEEEEecHH
Confidence            5799999999999999999999999875322      135677777777776543211    1112346789999998  


Q ss_pred             CHHHHHHHHHHCCCeEEeeC----CCceEEEEEcCCCCeEEEEeec
Q 029285          154 DVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQVD  195 (196)
Q Consensus       154 dl~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~iEl~e~~  195 (196)
                      ++++++++|+++|+.+..++    .+++.+||+|||||.|||.+.+
T Consensus        71 dld~~~~~l~~~G~~~~~~~~~~~~~~~~~~f~DPdG~~iEl~~~~  116 (131)
T cd08363          71 EFDAFYTRLKEAGVNILPGRKRDVRDRKSIYFTDPDGHKLEVHTGT  116 (131)
T ss_pred             HHHHHHHHHHHcCCcccCCCccccCcceEEEEECCCCCEEEEecCc
Confidence            59999999999999876432    3578999999999999999865

This subfamily family contains FosB, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosB catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin, (1R,2S)-epoxypropylphosphonic acid, rendering it inactive. FosB is evolutionarily related to glyoxalase I and type I extradiol dioxygenases

>cd08355 Glo_EDI_BRP_like_14 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.77  E-value=3.3e-17  Score=118.46  Aligned_cols=116  Identities=16%  Similarity=0.186  Sum_probs=85.2

Q ss_pred             EEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEEEECCHHHH
Q 029285           79 VGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKL  158 (196)
Q Consensus        79 v~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~p~~~~~~~hi~f~v~dl~~~  158 (196)
                      -.|.|+|++++++||+++||+++....+.+......+.+..++..+.+................++..|++|.|+|++++
T Consensus         3 p~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~d~d~~   82 (122)
T cd08355           3 PTLRYRDAAAAIDWLTDAFGFEERLVVPDDDGGVAHAELRFGDGGVMVGSVRDDYRASSARAGGAGTQGVYVVVDDVDAH   82 (122)
T ss_pred             EEEEECCHHHHHHHHHHhcCCEEEEEEeCCCCcEEEEEEEECCEEEEEecCCCcccccccccCCCceEEEEEEECCHHHH
Confidence            46899999999999999999999876543332223455677776677765443221110112234557999999999999


Q ss_pred             HHHHHHCCCeEEeeC----CCceEEEEEcCCCCeEEEEee
Q 029285          159 KMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQV  194 (196)
Q Consensus       159 ~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~iEl~e~  194 (196)
                      ++++.++|+++..++    +|.+.++++|||||.|+|.++
T Consensus        83 ~~~l~~~G~~v~~~~~~~~~g~~~~~~~DPdG~~~~l~~~  122 (122)
T cd08355          83 YERARAAGAEILREPTDTPYGSREFTARDPEGNLWTFGTY  122 (122)
T ss_pred             HHHHHHCCCEEeeCccccCCCcEEEEEECCCCCEEEEecC
Confidence            999999999887442    567889999999999999864

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd09014 BphC-JF8_C_like C-terminal, catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=99.77  E-value=1.6e-17  Score=127.45  Aligned_cols=118  Identities=21%  Similarity=0.343  Sum_probs=84.8

Q ss_pred             ceeceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEE
Q 029285           71 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI  150 (196)
Q Consensus        71 ~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~p~~~~~~~hi~f  150 (196)
                      |.+.+++|++|.|+|++++++||+++|||++......+......+|+...+....+........      ..+++.|+||
T Consensus         2 ~~i~~i~Hi~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~------~~~~~~hiaf   75 (166)
T cd09014           2 VGVRRLDHVNLLASDVDANRDFMEEVLGFRLREQIRLDNGKEAGAWMSVSNKVHDVAYTRDPAG------ARGRLHHLAY   75 (166)
T ss_pred             CCcceeeeEEEEcCCHHHHHHHHHHccCCEEEEEEecCCCceEEEEEeCCCCceeEEEecCCCC------CCCCceEEEE
Confidence            5688999999999999999999999999998765433322234578776543222322211110      1235789999


Q ss_pred             EECCH---HHHHHHHHHCCCeEEeeC-----CCceEEEEEcCCCCeEEEEee
Q 029285          151 AIRDV---SKLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQV  194 (196)
Q Consensus       151 ~v~dl---~~~~~~l~~~G~~~~~~~-----~g~~~~~~~DPdG~~iEl~e~  194 (196)
                      .|+|.   ++++++|+++|+++...+     .....+|++|||||.|||.+.
T Consensus        76 ~v~~~~~l~~~~~~l~~~Gv~i~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~  127 (166)
T cd09014          76 ALDTREDVLRAADIFLENGIFIEAGPGKHGIQQTFFLYVYEPGGNRVELFGG  127 (166)
T ss_pred             ECCCHHHHHHHHHHHHHcCCccccCCcccCCCCceEEEEECCCCCEEEEEEc
Confidence            99855   477889999999985432     123568999999999999886

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C. Th

>cd07242 Glo_EDI_BRP_like_6 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.77  E-value=2.4e-17  Score=119.96  Aligned_cols=114  Identities=25%  Similarity=0.346  Sum_probs=86.7

Q ss_pred             eeeEEEEEcCCHHHHHHHHHhcc---CCEEeeecCCCCCCceeEEEEe-CCeEEEEEecCCCCCCCCCCCCCCCceEEEE
Q 029285           75 SVHHVGILCENLERSLEFYQNIL---GLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNPDPLSGRPEHGGRDRHTCI  150 (196)
Q Consensus        75 ~l~hv~l~v~Dl~~a~~FY~~vL---G~~~~~~~~~~~~~~~~~~l~~-g~~~l~l~~~~~~~~~~~~p~~~~~~~hi~f  150 (196)
                      +++||+|.|+|++++++||+++|   ||++..+.+.     ...|... ++..+.|+........ .....+.+..|++|
T Consensus         1 ~i~Hv~i~v~d~~~~~~Fy~~~l~~~G~~~~~~~~~-----~~~~~~~~~~~~i~l~~~~~~~~~-~~~~~~~g~~hia~   74 (128)
T cd07242           1 GIHHVELTVRDLERSRAFYDWLLGLLGFEEVKEWED-----GRSWRAGDGGTYLVLQQADGESAG-RHDRRNPGLHHLAF   74 (128)
T ss_pred             CCceEEEEeCCHHHHHHHHHHHHhhcCCEEEEeecc-----CceEEecCCceEEEEEecccCCCc-ccccCCcCeeEEEE
Confidence            47999999999999999999999   9998875421     1245553 6678888766544321 11123456789999


Q ss_pred             EEC---CHHHHHHHHHHCCCeEEeeC-------CCceEEEEEcCCCCeEEEEee
Q 029285          151 AIR---DVSKLKMILDKAGISYTLSK-------SGRPAIFTRDPDANALEFTQV  194 (196)
Q Consensus       151 ~v~---dl~~~~~~l~~~G~~~~~~~-------~g~~~~~~~DPdG~~iEl~e~  194 (196)
                      .|+   |+++++++|+++|+++...+       .+.+.+|++|||||.+||..+
T Consensus        75 ~v~~~~d~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~DpdG~~ie~~~~  128 (128)
T cd07242          75 RAPSREAVDELYARLAKRGAEILYAPREPYAGGPGYYALFFEDPDGIRLELVAP  128 (128)
T ss_pred             EcCCHHHHHHHHHHHHHcCCeEecCCcccccCCCcEEEEEEECCCCcEEEEEeC
Confidence            997   58899999999999986543       246899999999999999863

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07257 THT_oxygenase_C The C-terminal domain of 2,4,5-Trihydroxytoluene (THT) oxygenase, which is an extradiol dioxygenease in the 2,4-dinitrotoluene (DNT) degradation pathway

Probab=99.77  E-value=4.8e-18  Score=128.55  Aligned_cols=113  Identities=15%  Similarity=0.153  Sum_probs=80.7

Q ss_pred             eeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCC-CCCceeEEEEeCCe--EEEEEecCCCCCCCCCCCCCCCceEEEEE
Q 029285           75 SVHHVGILCENLERSLEFYQNILGLEINEARPHD-KLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHTCIA  151 (196)
Q Consensus        75 ~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~-~~~~~~~~l~~g~~--~l~l~~~~~~~~~~~~p~~~~~~~hi~f~  151 (196)
                      +++||+|.|+|++++++||+++|||++..+...+ ......+|+..++.  .+........      +..+++++|+||.
T Consensus         1 ri~Hv~l~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~------~~~~~g~~Hiaf~   74 (153)
T cd07257           1 RLGHVVLEVPDFAASFDWYTETFGLKPSDVIYLPGPGNPVAAFLRLDRGEEYVDHHTLALA------QGPESGVHHAAFE   74 (153)
T ss_pred             CccEEEEecCCHHHHHHHHHHhcCCeEEeeEecCCCCCcEEEEEecCCCCCcccchHHHHh------cCCCCceeEEEEE
Confidence            4789999999999999999999999987643322 12235677776431  1111000000      0113578999999


Q ss_pred             ECCHHHHH---HHHHHCCCeEEeeCC----C-ceEEEEEcCCCCeEEEEe
Q 029285          152 IRDVSKLK---MILDKAGISYTLSKS----G-RPAIFTRDPDANALEFTQ  193 (196)
Q Consensus       152 v~dl~~~~---~~l~~~G~~~~~~~~----g-~~~~~~~DPdG~~iEl~e  193 (196)
                      |+|++++.   ++|+++|+++.+.+.    | ...+|++|||||.|||+.
T Consensus        75 v~die~~~~~~~~L~~~Gv~v~~~~g~~~~g~~~~~y~~DPdG~~iEl~~  124 (153)
T cd07257          75 VHDFDAQGLGHDYLREKGYEHVWGVGRHILGSQIFDYWFDPWGFIVEHYT  124 (153)
T ss_pred             cCCHHHHHHHHHHHHHCCCcEeecCCccCCCCCEEEEEECCCCCEEEEEc
Confidence            99999986   999999999876531    2 456799999999999985

This subfamily contains the C-terminal, catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>cd07263 Glo_EDI_BRP_like_16 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.77  E-value=2.6e-17  Score=117.26  Aligned_cols=113  Identities=21%  Similarity=0.303  Sum_probs=81.6

Q ss_pred             EEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeC---CeEEEEEecCCCCCCCCCCCCCCCceEEEEEECC
Q 029285           78 HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG---AEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD  154 (196)
Q Consensus        78 hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g---~~~l~l~~~~~~~~~~~~p~~~~~~~hi~f~v~d  154 (196)
                      ||+|.|.|++++++||+++|||++..+.+... ......+..+   +..+++.....+..  ..+...++..|++|.|+|
T Consensus         1 Hv~l~v~d~~~~~~fY~~~lG~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~v~d   77 (119)
T cd07263           1 LVSLYVDDQDKALAFYTEKLGFEVREDVPMGG-GFRWVTVAPPGSPETSLVLAPPANPAA--MSGLQPGGTPGLVLATDD   77 (119)
T ss_pred             CceEEeCCHHHHHHHHHhccCeEEEEeeccCC-CcEEEEEeCCCCCeeEEEEeCCCCccc--cccccCCCceEEEEEehH
Confidence            89999999999999999999999987654211 1222223322   23455443333221  122234567799999999


Q ss_pred             HHHHHHHHHHCCCeEEeeC---CCceEEEEEcCCCCeEEEEe
Q 029285          155 VSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQ  193 (196)
Q Consensus       155 l~~~~~~l~~~G~~~~~~~---~g~~~~~~~DPdG~~iEl~e  193 (196)
                      +++++++++++|+++...+   .+++.++++|||||.|||.|
T Consensus        78 i~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~  119 (119)
T cd07263          78 IDATYEELKARGVEFSEEPREMPYGTVAVFRDPDGNLFVLVQ  119 (119)
T ss_pred             HHHHHHHHHhCCCEEeeccccCCCceEEEEECCCCCEEEEeC
Confidence            9999999999999887654   34689999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07247 SgaA_N_like N-terminal domain of Streptomyces griseus SgaA (suppression of growth disturbance caused by A-factor at a high concentration under high osmolality during early growth phase), and similar domains

Probab=99.77  E-value=3.4e-17  Score=116.85  Aligned_cols=109  Identities=17%  Similarity=0.192  Sum_probs=83.0

Q ss_pred             eeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCC-eEEEEEecCCCCCCCCCCCCCCCceEEEEEECC
Q 029285           76 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA-EMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD  154 (196)
Q Consensus        76 l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~-~~l~l~~~~~~~~~~~~p~~~~~~~hi~f~v~d  154 (196)
                      +.|++|+|+|++++++||+++||+++..... +.  ...+++..++ ..+.++......     + ..+...|++|.++|
T Consensus         1 ~~hi~l~v~d~~~s~~FY~~~lG~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~f~v~d   71 (114)
T cd07247           1 PVWFELPTTDPERAKAFYGAVFGWTFEDMGD-GG--GDYAVFSTGGGAVGGLMKAPEPA-----A-GSPPGWLVYFAVDD   71 (114)
T ss_pred             CEEEEeeCCCHHHHHHHHHhccCceeeeccC-CC--CceEEEEeCCccEEEEecCCCCC-----C-CCCCeEEEEEEeCC
Confidence            3699999999999999999999999876443 11  2335566664 455555544321     1 12355799999999


Q ss_pred             HHHHHHHHHHCCCeEEeeC----CCceEEEEEcCCCCeEEEEe
Q 029285          155 VSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQ  193 (196)
Q Consensus       155 l~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~iEl~e  193 (196)
                      +++++++|.++|+++..++    .+++.++++|||||.|+|+|
T Consensus        72 i~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~DPdG~~~~l~~  114 (114)
T cd07247          72 VDAAAARVEAAGGKVLVPPTDIPGVGRFAVFADPEGAVFGLWQ  114 (114)
T ss_pred             HHHHHHHHHHCCCEEEeCCcccCCcEEEEEEECCCCCEEEeEC
Confidence            9999999999999887553    35789999999999999986

SgaA suppresses the growth disturbances caused by high osmolarity and a high concentration of A-factor, a microbial hormone, during the early growth phase in Streptomyces griseus. A-factor (2-isocapryloyl-3R-hydroxymethyl-gamma-butyrolactone) controls morphological differentiation and secondary metabolism in Streptomyces griseus. It is a chemical signaling molecule that at a very low concentration acts as a switch for yellow pigment production, aerial mycelium formation, streptomycin production, and streptomycin resistance. The structure and amino acid sequence of SgaA are closely related to a group of antibiotics resistance proteins, including bleomycin resistance protein, mitomycin resistance protein, and fosfomycin resistance proteins. SgaA might also function as a strep

>cd07265 2_3_CTD_N N-terminal domain of catechol 2,3-dioxygenase

Probab=99.77  E-value=2.4e-17  Score=119.33  Aligned_cols=108  Identities=16%  Similarity=0.187  Sum_probs=80.1

Q ss_pred             eceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCC--eEEEEEecCCCCCCCCCCCCCCCceEEEE
Q 029285           73 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA--EMIHLMELPNPDPLSGRPEHGGRDRHTCI  150 (196)
Q Consensus        73 i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~--~~l~l~~~~~~~~~~~~p~~~~~~~hi~f  150 (196)
                      +.+++|+.|.|.|++++++||+++|||++....+.     ..+|+...+  ....+.....         ...+..|++|
T Consensus         2 ~~~l~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~---------~~~~~~hiaf   67 (122)
T cd07265           2 VLRPGHVQLRVLDLEEAIKHYREVLGLDEVGRDDQ-----GRVYLKAWDEFDHHSIVLREA---------DTAGLDFMGF   67 (122)
T ss_pred             cceEeEEEEEeCCHHHHHHHHHhccCCEeeeecCC-----ceEEEEccCCCcccEEEeccC---------CCCCeeEEEE
Confidence            57899999999999999999999999998765321     135555421  1122221111         1235689999


Q ss_pred             EEC---CHHHHHHHHHHCCCeEEeeC----C-CceEEEEEcCCCCeEEEEee
Q 029285          151 AIR---DVSKLKMILDKAGISYTLSK----S-GRPAIFTRDPDANALEFTQV  194 (196)
Q Consensus       151 ~v~---dl~~~~~~l~~~G~~~~~~~----~-g~~~~~~~DPdG~~iEl~e~  194 (196)
                      .|+   ++++++++|+++|+++...+    . .++.+||+|||||.|||.+.
T Consensus        68 ~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iE~~~~  119 (122)
T cd07265          68 KVLDDADLEKLEARLQAYGVAVERIPAGELPGVGRRVRFQLPSGHTMELYAD  119 (122)
T ss_pred             EeCCHHHHHHHHHHHHHCCCcEEEcccCCCCCCceEEEEECCCCCEEEEEEe
Confidence            997   88899999999999986532    2 25789999999999999875

This subfamily contains the N-terminal, non-catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the N-terminal do

>cd07255 Glo_EDI_BRP_like_12 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.77  E-value=4.6e-17  Score=117.88  Aligned_cols=112  Identities=29%  Similarity=0.381  Sum_probs=84.4

Q ss_pred             ceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCC--eEEEEEecCCCCCCCCCCCCCCCceEEEEE
Q 029285           74 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA--EMIHLMELPNPDPLSGRPEHGGRDRHTCIA  151 (196)
Q Consensus        74 ~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~--~~l~l~~~~~~~~~~~~p~~~~~~~hi~f~  151 (196)
                      ++++||.|.|.|++++++||+++|||++....+      ..+++..++  ..+.|...+...   ..+....+..|++|.
T Consensus         1 ~~i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~~------~~~~l~~~~~~~~l~l~~~~~~~---~~~~~~~~~~hi~f~   71 (125)
T cd07255           1 TRIGAVTLRVADLERSLAFYQDVLGLEVLERTD------STAVLGTGGKRPLLVLEEDPDAP---PAPPGATGLYHFAIL   71 (125)
T ss_pred             CEEEEEEEEECCHHHHHHHHHhccCcEEEEcCC------CEEEEecCCCeEEEEEEeCCCCC---cccCCCCcEEEEEEE
Confidence            478999999999999999999999999987522      246676665  355555443221   112233467899999


Q ss_pred             EC---CHHHHHHHHHHCCCeEEeeCC--CceEEEEEcCCCCeEEEEee
Q 029285          152 IR---DVSKLKMILDKAGISYTLSKS--GRPAIFTRDPDANALEFTQV  194 (196)
Q Consensus       152 v~---dl~~~~~~l~~~G~~~~~~~~--g~~~~~~~DPdG~~iEl~e~  194 (196)
                      |+   ++++++++|+++|+++.....  ..+.+|++|||||.+||.+.
T Consensus        72 v~~~~~v~~~~~~l~~~g~~~~~~~~~~~~~~~~~~DPdG~~iEi~~~  119 (125)
T cd07255          72 LPSRADLAAALRRLIELGIPLVGASDHLVSEALYLSDPEGNGIEIYAD  119 (125)
T ss_pred             CCCHHHHHHHHHHHHHcCCceeccccccceeEEEEECCCCCEEEEEEe
Confidence            98   588999999999998764432  24789999999999999875

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07252 BphC1-RGP6_N_like N-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=99.77  E-value=2.6e-17  Score=119.15  Aligned_cols=106  Identities=18%  Similarity=0.225  Sum_probs=80.5

Q ss_pred             eeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEEEEC-
Q 029285           75 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR-  153 (196)
Q Consensus        75 ~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~p~~~~~~~hi~f~v~-  153 (196)
                      ++.||+|.|+|+++|++||+++|||++..+.+.     ..+|+..++..+.+...+..         ..+..|++|.++ 
T Consensus         2 ~l~~v~l~v~Dl~~s~~FY~~~LG~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~~---------~~~~~~~~f~v~~   67 (120)
T cd07252           2 SLGYLGVESSDLDAWRRFATDVLGLQVGDRPED-----GALYLRMDDRAWRIAVHPGE---------ADDLAYAGWEVAD   67 (120)
T ss_pred             cccEEEEEeCCHHHHHHHHHhccCceeccCCCC-----CeEEEEccCCceEEEEEeCC---------CCceeEEEEEECC
Confidence            689999999999999999999999998654221     24677766544444332211         135679999997 


Q ss_pred             --CHHHHHHHHHHCCCeEEeeC-------CCceEEEEEcCCCCeEEEEee
Q 029285          154 --DVSKLKMILDKAGISYTLSK-------SGRPAIFTRDPDANALEFTQV  194 (196)
Q Consensus       154 --dl~~~~~~l~~~G~~~~~~~-------~g~~~~~~~DPdG~~iEl~e~  194 (196)
                        |+++++++|+++|+++...+       .+++.+||+|||||.|||..-
T Consensus        68 ~~dl~~~~~~l~~~Gv~~~~~~~~~~~~~~~~~~~~~~DPdG~~iE~~~~  117 (120)
T cd07252          68 EAALDALAARLRAAGVAVEEGSAELAAERGVEGLIRFADPDGNRHELFWG  117 (120)
T ss_pred             HHHHHHHHHHHHHcCCeEEEcCHHHHhhCCCcEEEEEECCCCCEEEEEec
Confidence              58888999999999987532       224789999999999999864

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the N-terminal, non-catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of 2,3-dihydroxybiphenyl 1,2-dioxygenases. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its N-

>cd08346 PcpA_N_like N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=99.76  E-value=1.7e-17  Score=119.65  Aligned_cols=116  Identities=21%  Similarity=0.406  Sum_probs=84.7

Q ss_pred             eeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCC-CceeEEEEe----CCeEEEEEecCCCCCCCCCCCCCCCceEEE
Q 029285           75 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKL-PYRGAWLWV----GAEMIHLMELPNPDPLSGRPEHGGRDRHTC  149 (196)
Q Consensus        75 ~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~-~~~~~~l~~----g~~~l~l~~~~~~~~~~~~p~~~~~~~hi~  149 (196)
                      +++||+|.|.|++++++||+++|||++..+.+.... .....++..    ++..++|+..+.....  .+...++..|++
T Consensus         1 ~i~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~--~~~~~~~~~hi~   78 (126)
T cd08346           1 GLHHVTLITRDAQETVDFYTDVLGLRLVKKTVNQDDPGTYHLFFGDGLGSPGTLLTFFEWPDAGPK--GRRGPGQIHHIA   78 (126)
T ss_pred             CcccEEEEcCChhHhHHHHHHccCCEEeeeEeccCCCceEEEEEecCCCCCCCEEEEEecCCCCCC--CCCCCCcEEEEE
Confidence            478999999999999999999999998876543221 122333433    3457778766443211  112234578999


Q ss_pred             EEEC---CHHHHHHHHHHCCCeEEee--CCCceEEEEEcCCCCeEEEE
Q 029285          150 IAIR---DVSKLKMILDKAGISYTLS--KSGRPAIFTRDPDANALEFT  192 (196)
Q Consensus       150 f~v~---dl~~~~~~l~~~G~~~~~~--~~g~~~~~~~DPdG~~iEl~  192 (196)
                      |.|+   ++++++++++++|+++...  ..+++.+|++|||||.|||.
T Consensus        79 f~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~DP~G~~iE~~  126 (126)
T cd08346          79 FSVPSEASLDAWRERLRAAGVPVSGVVDHFGERSIYFEDPDGLRLELT  126 (126)
T ss_pred             EEcCCHHHHHHHHHHHHHcCCcccceEeecceEEEEEECCCCCEEEeC
Confidence            9999   5799999999999987543  24678999999999999984

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd09011 Glo_EDI_BRP_like_23 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.76  E-value=2.5e-17  Score=118.97  Aligned_cols=114  Identities=14%  Similarity=0.144  Sum_probs=77.3

Q ss_pred             ceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEEEEC
Q 029285           74 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR  153 (196)
Q Consensus        74 ~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~p~~~~~~~hi~f~v~  153 (196)
                      +++.|+.|.|+|+++|++||+++|||++....+  .    ...+ .++..+++...............+++..|++|.|+
T Consensus         1 ~~~~~~~l~v~D~~~a~~FY~~~lG~~~~~~~~--~----~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~v~   73 (120)
T cd09011           1 MKFKNPLLVVKDIEKSKKFYEKVLGLKVVMDFG--E----NVTF-EGGFALQEGYSWLEGISKADIIEKSNNFELYFEEE   73 (120)
T ss_pred             CEEEEEEEEECCHHHHHHHHHHhcCCEEeeccC--c----eEEE-eccceeccchhhhccCCcccccccCCceEEEEEeh
Confidence            368899999999999999999999999864321  1    1112 12222222211100000111112345579999999


Q ss_pred             CHHHHHHHHHHCCC-eEEee----CCCceEEEEEcCCCCeEEEEee
Q 029285          154 DVSKLKMILDKAGI-SYTLS----KSGRPAIFTRDPDANALEFTQV  194 (196)
Q Consensus       154 dl~~~~~~l~~~G~-~~~~~----~~g~~~~~~~DPdG~~iEl~e~  194 (196)
                      |+++++++|+++|+ ++..+    ++|.+.++|+|||||.|||.+.
T Consensus        74 dvd~~~~~l~~~g~~~~~~~~~~~~~g~r~~~~~DPdGn~iei~~~  119 (120)
T cd09011          74 DFDAFLDKLKRYDNIEYVHPIKEHPWGQRVVRFYDPDKHIIEVGES  119 (120)
T ss_pred             hhHHHHHHHHhcCCcEEecCcccCCCccEEEEEECCCCCEEEEecc
Confidence            99999999999985 56433    3567899999999999999874

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08361 PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=99.76  E-value=3.7e-17  Score=119.24  Aligned_cols=108  Identities=19%  Similarity=0.285  Sum_probs=81.7

Q ss_pred             eeceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEEE
Q 029285           72 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIA  151 (196)
Q Consensus        72 ~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~p~~~~~~~hi~f~  151 (196)
                      ++.++.||.|.|+|++++.+||+++|||++..+.+      ..+|+..++....+......          .+..|++|.
T Consensus         3 ~~~~l~~v~l~v~d~~~s~~FY~~vLG~~~~~~~~------~~~~l~~~~~~~~i~l~~~~----------~~~~~iaf~   66 (124)
T cd08361           3 ELQDIAYVRLGTRDLAGATRFATDILGLQVAERTA------KATYFRSDARDHTLVYIEGD----------PAEQASGFE   66 (124)
T ss_pred             eEEEeeEEEEeeCCHHHHHHHHHhccCceeccCCC------CeEEEEcCCccEEEEEEeCC----------CceEEEEEE
Confidence            46789999999999999999999999999875421      24778776432222221111          134789999


Q ss_pred             ECC---HHHHHHHHHHCCCeEEeeC-------CCceEEEEEcCCCCeEEEEeec
Q 029285          152 IRD---VSKLKMILDKAGISYTLSK-------SGRPAIFTRDPDANALEFTQVD  195 (196)
Q Consensus       152 v~d---l~~~~~~l~~~G~~~~~~~-------~g~~~~~~~DPdG~~iEl~e~~  195 (196)
                      |++   +++++++|+++|+++...+       .+.+.+||+|||||.|||+..+
T Consensus        67 v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~f~DPdG~~iE~~~~~  120 (124)
T cd08361          67 LRDDDALESAATELEQYGHEVRRGTAEECELRKVKAFIAFRDPSGNSIELVVRP  120 (124)
T ss_pred             ECCHHHHHHHHHHHHHcCCceEEcCHHHhhcCCcceEEEEECcCCCEEEEEEee
Confidence            985   9999999999999886542       2356789999999999998764

This subfamily contains the N-terminal, non-catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>PF00903 Glyoxalase: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily This Prosite is specific to glyoxalases This Prosite is specific to Extradiol ring-cleavage dioxygenases This prints entry is specific to bleomycin resistance protein

Probab=99.76  E-value=2.1e-18  Score=124.35  Aligned_cols=117  Identities=26%  Similarity=0.447  Sum_probs=84.3

Q ss_pred             eeeEEEEEcCCHHHHHHHHHhccCCEEeeecC--CCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCC-CCCCceEEEEE
Q 029285           75 SVHHVGILCENLERSLEFYQNILGLEINEARP--HDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPE-HGGRDRHTCIA  151 (196)
Q Consensus        75 ~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~--~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~p~-~~~~~~hi~f~  151 (196)
                      +++||+|.|+|++++++||+++|||++.....  .........++..++..++++....+........ ......|+++.
T Consensus         1 ~l~Hi~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~   80 (128)
T PF00903_consen    1 GLDHIAIRVKDLEKAIDFYTDVLGFRLVEESDNDGEGGDLRIAFLRIGEGHIELFLNPSPPPRASGHSFPEHGGHHIAFL   80 (128)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTTSEEEEEEEEESTTEEEEEEEEESTSSCEEEEEEESSSSSSEEEHHHSHTSEEEEEE
T ss_pred             CeEEEEEEcCCHHHHHHHHHHHhCCcEEeeeccccccccccceeecccccceeeeeeccccccccccccccccceeEEEE
Confidence            68999999999999999999999999998766  2222334566777777788876654432211110 00134577777


Q ss_pred             EC---CHHHHHHHHHHCCCeEEeeC----CC-ceEEEEEcCCCCeEEE
Q 029285          152 IR---DVSKLKMILDKAGISYTLSK----SG-RPAIFTRDPDANALEF  191 (196)
Q Consensus       152 v~---dl~~~~~~l~~~G~~~~~~~----~g-~~~~~~~DPdG~~iEl  191 (196)
                      +.   |+++++++|++.|+++..++    .+ ...+|++|||||.|||
T Consensus        81 ~~~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~y~~Dp~G~~iE~  128 (128)
T PF00903_consen   81 AFDVDDLDAAYERLKAQGVEIVEEPDRYYFGSGYSFYFRDPDGNLIEF  128 (128)
T ss_dssp             ESSHHHHHHHHHHHHHTTGEEEEEEEEHSTTCEEEEEEEETTSEEEEE
T ss_pred             eccHHHHHHHHHHHhhcCccEEecCCCCCCCCEEEEEEECCCCCEEEC
Confidence            66   77788999999999987664    23 4446799999999997

; InterPro: IPR004360 Glyoxalase I (4.4.1.5 from EC) (lactoylglutathione lyase) catalyzes the first step of the glyoxal pathway. S-lactoylglutathione is then converted by glyoxalase II to lactic acid []. Glyoxalase I is an ubiquitous enzyme which binds one mole of zinc per subunit. The bacterial and yeast enzymes are monomeric while the mammalian one is homodimeric. The sequence of glyoxalase I is well conserved. The domain represented by this entry is found in glyoxalase I and in other related proteins, including fosfomycin resistance proteins FosB [], FosA [], FosX [] and dioxygenases (eg. 4-hydroxyphenylpyruvate dioxygenase).; PDB: 1CJX_A 1NPB_E 3OJT_C 3OJN_A 2IG9_B 3OJJ_B 3OJK_D 1Q0C_D 1F1X_C 3BZA_B ....

>cd09013 BphC-JF8_N_like N-terminal, non-catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=99.76  E-value=3.3e-17  Score=118.49  Aligned_cols=111  Identities=20%  Similarity=0.285  Sum_probs=82.3

Q ss_pred             ceeceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCe-EEEEEecCCCCCCCCCCCCCCCceEEE
Q 029285           71 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE-MIHLMELPNPDPLSGRPEHGGRDRHTC  149 (196)
Q Consensus        71 ~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~-~l~l~~~~~~~~~~~~p~~~~~~~hi~  149 (196)
                      |.+.+++|+.|.|+|++++++||+++|||++..+.+      ..+|+..++. ..+.+.....        ...+..|++
T Consensus         2 ~~i~~i~hv~l~v~dl~~a~~FY~~~lG~~~~~~~~------~~~~l~~~~~~~~~~~~l~~~--------~~~~~~h~a   67 (121)
T cd09013           2 FDIAHLAHVELLTPKPEESLWFFTDVLGLEETGREG------QSVYLRAWGDYEHHSLKLTES--------PEAGLGHIA   67 (121)
T ss_pred             CCccEeeEEEEEeCCHHHHHHHHHhCcCCEEEeecC------CeEEEEeccCCCccEEEEeeC--------CCCceEEEE
Confidence            457899999999999999999999999999887532      2356655331 1111111111        123678999


Q ss_pred             EEEC---CHHHHHHHHHHCCCeEEee---CCCceEEEEEcCCCCeEEEEeec
Q 029285          150 IAIR---DVSKLKMILDKAGISYTLS---KSGRPAIFTRDPDANALEFTQVD  195 (196)
Q Consensus       150 f~v~---dl~~~~~~l~~~G~~~~~~---~~g~~~~~~~DPdG~~iEl~e~~  195 (196)
                      |.|+   ++++++++++++|+++...   +..+..+|++|||||.|||+...
T Consensus        68 f~v~~~~~v~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~  119 (121)
T cd09013          68 WRASSPEALERRVAALEASGLGIGWIEGDPGHGKAYRFRSPDGHPMELYWEV  119 (121)
T ss_pred             EEcCCHHHHHHHHHHHHHcCCccccccCCCCCcceEEEECCCCCEEEEEEec
Confidence            9997   6788899999999987532   24467899999999999998754

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C

>cd07267 THT_Oxygenase_N N-terminal domain of 2,4,5-trihydroxytoluene (THT) oxygenase

Probab=99.76  E-value=4.4e-17  Score=116.76  Aligned_cols=106  Identities=15%  Similarity=0.181  Sum_probs=80.9

Q ss_pred             eceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEEEE
Q 029285           73 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  152 (196)
Q Consensus        73 i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~p~~~~~~~hi~f~v  152 (196)
                      +.+++|+.|.|+|+++|++||++ |||++..+.+      ..+|+..++....++......        .++..|++|.|
T Consensus         1 ~~~l~hv~l~v~Dl~~s~~FY~~-lGl~~~~~~~------~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~af~v   65 (113)
T cd07267           1 LTDIAHVRFEHPDLDKAERFLTD-FGLEVAARTD------DELYYRGYGTDPFVYVARKGE--------KARFVGAAFEA   65 (113)
T ss_pred             CcEEEEEEEccCCHHHHHHHHHH-cCCEEEEecC------CeEEEecCCCccEEEEcccCC--------cCcccEEEEEE
Confidence            46899999999999999999999 9999875432      246776654333333222111        13667999999


Q ss_pred             CCHHHHHHHHHHCCCeEEee---CCCceEEEEEcCCCCeEEEEe
Q 029285          153 RDVSKLKMILDKAGISYTLS---KSGRPAIFTRDPDANALEFTQ  193 (196)
Q Consensus       153 ~dl~~~~~~l~~~G~~~~~~---~~g~~~~~~~DPdG~~iEl~e  193 (196)
                      +|.+++.+.+++.|+.+...   +.+++.++|+|||||.|||+.
T Consensus        66 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~  109 (113)
T cd07267          66 ASRADLEKAAALPGASVIDDLEAPGGGKRVTLTDPDGFPVELVY  109 (113)
T ss_pred             CCHHHHHHHHHcCCCeeecCCCCCCCceEEEEECCCCCEEEEEe
Confidence            99999999999999977543   456789999999999999975

This subfamily contains the N-terminal, non-catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>cd07264 Glo_EDI_BRP_like_15 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.76  E-value=4.8e-17  Score=117.67  Aligned_cols=115  Identities=18%  Similarity=0.218  Sum_probs=80.9

Q ss_pred             eeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCeEEEEEecCCC--CCC----CCCCCCCCCceEEE
Q 029285           76 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP--DPL----SGRPEHGGRDRHTC  149 (196)
Q Consensus        76 l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~--~~~----~~~p~~~~~~~hi~  149 (196)
                      +.|+.|+|+|++++.+||+++|||++....+.+.  +  ..+..++..+.+......  ...    +..+...++..|++
T Consensus         1 ~~~~~l~v~D~~~s~~FY~~~lG~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (125)
T cd07264           1 FGYTIIYVEDVEKTLEFYERAFGFERRFLHESGD--Y--GELETGETTLAFASHDLAESNLKGGFVKADPAQPPAGFEIA   76 (125)
T ss_pred             CceEEEEEcCHHHHHHHHHHhhCCeEEeecCCCc--E--EEecCCcEEEEEEcccccccccccCccCCccccCCCcEEEE
Confidence            4699999999999999999999999875433211  1  223345555555543211  000    01122223346999


Q ss_pred             EEECCHHHHHHHHHHCCCeEEee----CCCceEEEEEcCCCCeEEEEee
Q 029285          150 IAIRDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  194 (196)
Q Consensus       150 f~v~dl~~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdG~~iEl~e~  194 (196)
                      |.|+|+++++++++++|+++..+    +.|.+.++++|||||.|||.++
T Consensus        77 ~~v~di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~~~~~~~  125 (125)
T cd07264          77 FVTDDVAAAFARAVEAGAVLVSEPKEKPWGQTVAYVRDINGFLIELCSP  125 (125)
T ss_pred             EEcCCHHHHHHHHHHcCCEeccCCccCCCCcEEEEEECCCCCEEEEecC
Confidence            99999999999999999988544    3566889999999999999874

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07249 MMCE Methylmalonyl-CoA epimerase (MMCE)

Probab=99.75  E-value=2.8e-17  Score=118.96  Aligned_cols=118  Identities=22%  Similarity=0.354  Sum_probs=88.4

Q ss_pred             eeEEEEEcCCHHHHHHHHHhccCCEEeeecCCC-CCCceeEEEEeCCeEEEEEecCCCCCCCC--CCCCCCCceEEEEEE
Q 029285           76 VHHVGILCENLERSLEFYQNILGLEINEARPHD-KLPYRGAWLWVGAEMIHLMELPNPDPLSG--RPEHGGRDRHTCIAI  152 (196)
Q Consensus        76 l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~-~~~~~~~~l~~g~~~l~l~~~~~~~~~~~--~p~~~~~~~hi~f~v  152 (196)
                      ++||.|+|.|++++.+||+++|||+.....+.. ......+|+..++..++|+..........  ....+.+..|++|.|
T Consensus         1 ~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~g~~h~~f~v   80 (128)
T cd07249           1 IDHIGIAVPDLEAAIKFYRDVLGVGPWEEEEVPPEQGVRVAFLGLGNVQIELIEPLDDDSPIAKFLEKRGEGLHHIAFEV   80 (128)
T ss_pred             CcEEEEEeCCHHHHHHHHHHhhCCCCccccccCcccccEEEEEEcCCEEEEEEEECCCCCcHHHHHhcCCCceEEEEEEe
Confidence            479999999999999999999999998755432 22345678888888888887543322111  112456778999999


Q ss_pred             CCHHHHHHHHHHCCCeEEeeC----CCceEEEEEcCC---CCeEEEEe
Q 029285          153 RDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPD---ANALEFTQ  193 (196)
Q Consensus       153 ~dl~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPd---G~~iEl~e  193 (196)
                      +|+++++++++++|+++..++    .+++.+++.||+   |+.|||+|
T Consensus        81 ~d~~~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~d~~~~~g~~iE~~~  128 (128)
T cd07249          81 DDIDAALARLKAQGVRLLQEGPRIGAGGKRVAFLHPKDTGGVLIELVE  128 (128)
T ss_pred             CCHHHHHHHHHHCCCeeeccCCCccCCCCEEEEEecCCCceEEEEecC
Confidence            999999999999999987654    234555555555   99999975

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases.

>cd08360 MhqB_like_C C-terminal domain of Burkholderia sp

Probab=99.75  E-value=6.1e-17  Score=119.55  Aligned_cols=106  Identities=20%  Similarity=0.342  Sum_probs=80.6

Q ss_pred             ceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCC----eEEEEEecCCCCCCCCCCCCCCCceEEE
Q 029285           74 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA----EMIHLMELPNPDPLSGRPEHGGRDRHTC  149 (196)
Q Consensus        74 ~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~----~~l~l~~~~~~~~~~~~p~~~~~~~hi~  149 (196)
                      .+++||+|.|.|+++|++||+++|||++..+.+     ...+|+..++    ..+.+...+.         ...+++|++
T Consensus         2 ~~l~hi~l~v~dl~~s~~FY~~vlGl~~~~~~~-----~~~~~~~~~~~~~~~~i~l~~~~~---------~~~g~~hia   67 (134)
T cd08360           2 RRLGHVVLFVPDVEAAEAFYRDRLGFRVSDRFK-----GRGAFLRAAGGGDHHNLFLIKTPA---------PMAGFHHAA   67 (134)
T ss_pred             ceeeEEEEEcCCHHHHHHHHHHhcCCEEEEEec-----CcEEEEECCCCCCCcEEEEecCCC---------CCCcceEEE
Confidence            478999999999999999999999999876532     1356777652    2344433221         135788999


Q ss_pred             EEECCHHHHH---HHHHHCCCeEEeeC-----CCceEEEEEcCCCCeEEEEe
Q 029285          150 IAIRDVSKLK---MILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQ  193 (196)
Q Consensus       150 f~v~dl~~~~---~~l~~~G~~~~~~~-----~g~~~~~~~DPdG~~iEl~e  193 (196)
                      |.|+|++++.   ++|+++|+++...+     .+.+.+|++||+||.|||..
T Consensus        68 f~v~d~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~y~~DP~G~~iEl~~  119 (134)
T cd08360          68 FEVGDIDEVMLGGNHMLRAGYQTGWGPGRHRIGSNYFWYFRDPWGGEVEYGA  119 (134)
T ss_pred             EEeCCHHHHHHHHHHHHHcCCccccCCCCcCCCccEEEEEECCCCCEEEEEc
Confidence            9999888776   59999999876533     23467899999999999985

NF100 MhqB and similar proteins; MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. This subfamily contains the C-terminal, catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07246 Glo_EDI_BRP_like_8 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.75  E-value=1.4e-16  Score=114.49  Aligned_cols=113  Identities=19%  Similarity=0.175  Sum_probs=84.8

Q ss_pred             EEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEEEECCHHHH
Q 029285           79 VGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKL  158 (196)
Q Consensus        79 v~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~p~~~~~~~hi~f~v~dl~~~  158 (196)
                      +.|+|+|++++.+||+++||+++......+......+.+..++..+.+........  ......++..|++|.|+|++++
T Consensus         5 ~~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~v~d~~~~   82 (122)
T cd07246           5 PYLIVRDAAAAIDFYKKAFGAEELERMPDDDGRVMHAELRIGDSVLMLADEFPEHG--SPASWGGTPVSLHLYVEDVDAT   82 (122)
T ss_pred             EEEEECCHHHHHHHHHHhhCCEEEEEEeCCCCCEEEEEEEECCEEEEEecCCcccC--CCCCCCCceEEEEEEeCCHHHH
Confidence            46899999999999999999999876543333333455677777777765322111  1111234567999999999999


Q ss_pred             HHHHHHCCCeEEee----CCCceEEEEEcCCCCeEEEEe
Q 029285          159 KMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQ  193 (196)
Q Consensus       159 ~~~l~~~G~~~~~~----~~g~~~~~~~DPdG~~iEl~e  193 (196)
                      ++++.+.|+++..+    ++|.+.++++|||||.|+|.|
T Consensus        83 ~~~l~~~G~~~~~~~~~~~~g~~~~~~~DP~G~~~~l~~  121 (122)
T cd07246          83 FARAVAAGATSVMPPADQFWGDRYGGVRDPFGHRWWIAT  121 (122)
T ss_pred             HHHHHHCCCeEecCcccccccceEEEEECCCCCEEEEec
Confidence            99999999988644    356789999999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd08351 ChaP_like ChaP, an enzyme involved in the biosynthesis of the antitumor agent chartreusin (cha); and similar proteins

Probab=99.75  E-value=6.8e-17  Score=117.38  Aligned_cols=106  Identities=21%  Similarity=0.306  Sum_probs=80.3

Q ss_pred             ceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeC-CeEEEEEecCCCCCCCCCCCCCCCceEEEEEE
Q 029285           74 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-AEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  152 (196)
Q Consensus        74 ~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g-~~~l~l~~~~~~~~~~~~p~~~~~~~hi~f~v  152 (196)
                      .+++|+.|.|+|+++|++||+++|||++.....      ..+++..+ +..+.+.....          ..+..|++|.+
T Consensus         3 ~~~~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~------~~~~~~~~~~~~l~~~~~~~----------~~~~~h~a~~v   66 (123)
T cd08351           3 VTLNHTIVPARDREASAEFYAEILGLPWAKPFG------PFAVVKLDNGVSLDFAQPDG----------EIPPQHYAFLV   66 (123)
T ss_pred             ceEeEEEEEcCCHHHHHHHHHHhcCCEeeeccC------CEEEEEcCCCcEEEEecCCC----------CCCcceEEEEe
Confidence            578999999999999999999999999875221      12334443 33555543211          12347999988


Q ss_pred             C--CHHHHHHHHHHCCCeEEee-----------CCCceEEEEEcCCCCeEEEEeec
Q 029285          153 R--DVSKLKMILDKAGISYTLS-----------KSGRPAIFTRDPDANALEFTQVD  195 (196)
Q Consensus       153 ~--dl~~~~~~l~~~G~~~~~~-----------~~g~~~~~~~DPdG~~iEl~e~~  195 (196)
                      +  |+++++++|+++|+++...           ..|++.+||+|||||.|||.+.|
T Consensus        67 ~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~g~~~~~f~DPdG~~iEl~~~~  122 (123)
T cd08351          67 SEEEFDRIFARIRERGIDYWADPQRTEPGQINTNDGGRGVYFLDPDGHLLEIITRP  122 (123)
T ss_pred             CHHHHHHHHHHHHHcCCceecCCcccccccccCCCCeeEEEEECCCCCEEEEEecc
Confidence            7  6999999999999987432           24679999999999999999875

ChaP is an enzyme involved in the biosynthesis of the potent antitumor agent chartreusin (cha). Cha is an aromatic polyketide glycoside produced by Streptomyces chartreusis. ChaP may play a role as a meta-cleavage dioxygenase in the oxidative rearrangement of the anthracyclic polyketide. ChaP belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd08348 BphC2-C3-RGP6_C_like The single-domain 2,3-dihydroxybiphenyl 1,2-dioxygenases (BphC, EC 1

Probab=99.75  E-value=1.2e-16  Score=117.39  Aligned_cols=113  Identities=25%  Similarity=0.363  Sum_probs=84.1

Q ss_pred             eeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeC---CeEEEEEecCCCCCCCCCCCCCCCceEEEEE
Q 029285           75 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG---AEMIHLMELPNPDPLSGRPEHGGRDRHTCIA  151 (196)
Q Consensus        75 ~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g---~~~l~l~~~~~~~~~~~~p~~~~~~~hi~f~  151 (196)
                      +++|+.|.|+|++++++||+++|||++....+.    ....|+..+   +..+.++.......    +....+..|++|.
T Consensus         1 ~i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~----~~~~~~~~~~~~~~~l~l~~~~~~~~----~~~~~~~~h~~f~   72 (134)
T cd08348           1 RLSHVVLYVRDLEAMVRFYRDVLGFTVTDRGPL----GGLVFLSRDPDEHHQIALITGRPAAP----PPGPAGLNHIAFE   72 (134)
T ss_pred             CeeEEEEEecCHHHHHHHHHHhcCCEEEeeccC----CcEEEEEecCCCceEEEEEecCCCCC----CCCCCCceEEEEE
Confidence            478999999999999999999999998765432    134566655   23566665433211    1223467899999


Q ss_pred             ECCHH---HHHHHHHHCCCeEEeeC--CCceEEEEEcCCCCeEEEEeec
Q 029285          152 IRDVS---KLKMILDKAGISYTLSK--SGRPAIFTRDPDANALEFTQVD  195 (196)
Q Consensus       152 v~dl~---~~~~~l~~~G~~~~~~~--~g~~~~~~~DPdG~~iEl~e~~  195 (196)
                      |++++   +++++|.+.|+++....  .+++.++++|||||.|||.+..
T Consensus        73 v~~~~~v~~~~~~l~~~G~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~  121 (134)
T cd08348          73 VDSLDDLRDLYERLRAAGITPVWPVDHGNAWSIYFRDPDGNRLELFVDT  121 (134)
T ss_pred             eCCHHHHHHHHHHHHHCCCCccccCCCCceeEEEEECCCCCEEEEEEcC
Confidence            99765   57899999999876543  3468899999999999999753

13.11.39) from Rhodococcus globerulus P6, BphC2-RGP6 and BphC3-RGP6, and similar proteins. This subfamily contains Rhodococcus globerulus P6 BphC2-RGP6 and BphC3-RGP6, and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, yielding 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid. This is the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Most type I extradiol dioxygenases are activated by Fe(II). Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC2-RGP6 and BphC3-RGP6 are

>cd07244 FosA FosA, a Fosfomycin resistance protein, catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive

Probab=99.75  E-value=4.4e-17  Score=118.03  Aligned_cols=106  Identities=26%  Similarity=0.427  Sum_probs=82.0

Q ss_pred             eeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEEEEC-
Q 029285           75 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR-  153 (196)
Q Consensus        75 ~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~p~~~~~~~hi~f~v~-  153 (196)
                      +++|+.|.|+|++++++||+++|||++....+      ..+|+..++..+.+...+...       ..++..|++|.++ 
T Consensus         1 ~i~hv~l~v~d~~~~~~FY~~vLG~~~~~~~~------~~~~~~~~~~~~~l~~~~~~~-------~~~~~~hi~f~v~~   67 (121)
T cd07244           1 GINHITLAVSDLERSVAFYVDLLGFKLHVRWD------KGAYLEAGDLWLCLSVDANVG-------PAKDYTHYAFSVSE   67 (121)
T ss_pred             CcceEEEEECCHHHHHHHHHHhcCCEEEEecC------CceEEecCCEEEEEecCCCCC-------CCCCeeeEEEEeCH
Confidence            47899999999999999999999999876543      135677777655554322110       1245679999984 


Q ss_pred             -CHHHHHHHHHHCCCeEEeeC-CCceEEEEEcCCCCeEEEEe
Q 029285          154 -DVSKLKMILDKAGISYTLSK-SGRPAIFTRDPDANALEFTQ  193 (196)
Q Consensus       154 -dl~~~~~~l~~~G~~~~~~~-~g~~~~~~~DPdG~~iEl~e  193 (196)
                       |+++++++++++|+++...+ ..++.+||+|||||.|||+.
T Consensus        68 ~dl~~~~~~l~~~G~~~~~~~~~~~~~~~f~DPdG~~ie~~~  109 (121)
T cd07244          68 EDFASLKEKLRQAGVKEWKENTSEGDSFYFLDPDGHKLELHV  109 (121)
T ss_pred             HHHHHHHHHHHHcCCcccCCCCCCccEEEEECCCCCEEEEEe
Confidence             89999999999999886543 33678999999999999986

This subfamily family contains FosA, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosA, catalyzes the addition of glutathione to the antibiotic fosfomycin, (1R,2S)-epoxypropylphosphonic acid, making it inactive. FosA is a Mn(II) dependent enzyme. It is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd08358 Glo_EDI_BRP_like_21 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.74  E-value=7.7e-17  Score=118.39  Aligned_cols=110  Identities=15%  Similarity=0.180  Sum_probs=77.6

Q ss_pred             eeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCC-----------CCceeEEEEeC----CeEEEEEecCCCCCCCCCC
Q 029285           75 SVHHVGILCENLERSLEFYQNILGLEINEARPHDK-----------LPYRGAWLWVG----AEMIHLMELPNPDPLSGRP  139 (196)
Q Consensus        75 ~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~-----------~~~~~~~l~~g----~~~l~l~~~~~~~~~~~~p  139 (196)
                      ++.|++|+|.|+++|++||+++|||++..+.+.++           ......++..+    +..++|.......+    +
T Consensus         2 ~~~Hv~irV~DlerSi~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~lEL~~n~~~~~----~   77 (127)
T cd08358           2 RALHFVFKVGNRNKTIKFYREVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMIGYGPEDDHFVVELTYNYGIGD----Y   77 (127)
T ss_pred             ceEEEEEEeCCHHHHHHHHHHhcCCEEEeeecCccccccccccCCCCcEEEEEEecCCCCCccEEEeEecCCCCC----C
Confidence            67899999999999999999999999877654443           11112334432    23666665332211    1


Q ss_pred             CCCCCceEEEEEECCHHHHHHHHHHCCCeEEeeCCCceEEEEEcCCCCeEEEEe
Q 029285          140 EHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQ  193 (196)
Q Consensus       140 ~~~~~~~hi~f~v~dl~~~~~~l~~~G~~~~~~~~g~~~~~~~DPdG~~iEl~e  193 (196)
                      ..+.+  |++|.|++. ++.++|+++|+++...+.+  .+|++||||+.|||..
T Consensus        78 ~~g~~--~~hlav~~~-d~~~~l~~~Gv~~~~~~~~--~~fi~DPDG~~ie~~~  126 (127)
T cd08358          78 ELGND--FLGITIHSK-QAVSNAKKHNWPVTEVEDG--VYEVKAPGGYKFYLID  126 (127)
T ss_pred             CCCCC--EEEEEEECH-HHHHHHHHCCCceecCCCC--EEEEECCCCCEEEEec
Confidence            22333  677777766 5669999999999876654  8999999999999963

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07256 HPCD_C_class_II C-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD), which catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate; belongs to the type I class II family of extradiol dioxygenases

Probab=99.74  E-value=8.8e-17  Score=122.63  Aligned_cols=112  Identities=21%  Similarity=0.324  Sum_probs=78.4

Q ss_pred             ceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEEEEC
Q 029285           74 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR  153 (196)
Q Consensus        74 ~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~p~~~~~~~hi~f~v~  153 (196)
                      ++++||+|.|+|++++++||+++|||++......+.......|+..++....+.....         .+.+..|++|.|+
T Consensus         2 ~~l~Hv~l~V~Dl~~s~~FY~~vLGl~~~~~~~~~~~~~~~~~l~~~~~~~~i~l~~~---------~~~~~~Hiaf~v~   72 (161)
T cd07256           2 QRLDHFNLRVPDVDAGLAYYRDELGFRVSEYTEDDDGTTWAAWLHRKGGVHDTALTGG---------NGPRLHHVAFWVP   72 (161)
T ss_pred             ceEEEEEEecCCHHHHHHHHHhccCCEEEEEeccCCCcEEEEEEecCCCcceEEEecC---------CCCceeEEEEEcC
Confidence            5789999999999999999999999998754332222233466655433222211111         1236789999998


Q ss_pred             C---HHHHHHHHHHCCCeE--EeeC-----CCceEEEEEcCCCCeEEEEee
Q 029285          154 D---VSKLKMILDKAGISY--TLSK-----SGRPAIFTRDPDANALEFTQV  194 (196)
Q Consensus       154 d---l~~~~~~l~~~G~~~--~~~~-----~g~~~~~~~DPdG~~iEl~e~  194 (196)
                      +   +++++++|+++|+..  ...+     .+.+.+|++|||||.|||++.
T Consensus        73 ~~~~v~~~~~~L~~~G~~~~~~~~p~~~g~~~~~~~y~~DPdG~~iEl~~~  123 (161)
T cd07256          73 EPHNIIRTCDLLAAAGYSDRIERGPGRHGISNAFFLYLRDPDGHRIEIYTG  123 (161)
T ss_pred             CHHHHHHHHHHHHHcCCCcccccCCCccCCCCceEEEEECCCCCeEEEeec
Confidence            5   677788999999863  2221     234679999999999999864

This subfamily contains the C-terminal, catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of

>cd07237 BphC1-RGP6_C_like C-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=99.74  E-value=6.7e-17  Score=122.42  Aligned_cols=112  Identities=17%  Similarity=0.283  Sum_probs=82.9

Q ss_pred             eceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCC---CCCceeEEEEeCCe--EEEEEecCCCCCCCCCCCCCCCceE
Q 029285           73 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHD---KLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRH  147 (196)
Q Consensus        73 i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~---~~~~~~~~l~~g~~--~l~l~~~~~~~~~~~~p~~~~~~~h  147 (196)
                      .++++||+|.|+|++++++||+++|||++.......   ......+|+..++.  .+.+.....          +++..|
T Consensus         7 ~~~l~Hi~l~v~Dl~~a~~FY~~~LGl~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~----------~~g~~H   76 (154)
T cd07237           7 DQGLGHVVLATPDPDEAHAFYRDVLGFRLSDEIDIPLPPGPTARVTFLHCNGRHHSLALAEGPG----------PKRIHH   76 (154)
T ss_pred             CCccCEEEEEeCCHHHHHHHHHHccCCEEEEEEcccCCCCCcceEEEEEeCCCCCCEEEEcCCC----------CceeEE
Confidence            367999999999999999999999999987643221   11234567776542  233322211          246889


Q ss_pred             EEEEECCHH---HHHHHHHHCCCeEEeeC-----CCceEEEEEcCCCCeEEEEee
Q 029285          148 TCIAIRDVS---KLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQV  194 (196)
Q Consensus       148 i~f~v~dl~---~~~~~l~~~G~~~~~~~-----~g~~~~~~~DPdG~~iEl~e~  194 (196)
                      ++|.|+|++   +++++|+++|+++...+     .+.+.+|++|||||.|||...
T Consensus        77 iaf~V~d~~~l~~~~~~L~~~G~~v~~~~~~~~~~~~~~~y~~DPdG~~iEl~~~  131 (154)
T cd07237          77 LMLEVTSLDDVGRAYDRVRARGIPIAMTLGRHTNDRMLSFYVRTPSGFAIEYGWG  131 (154)
T ss_pred             EEEEcCCHHHHHHHHHHHHHcCCceeccCCccCCCCcEEEEEECCCCcEEEeccC
Confidence            999998665   57999999999986543     246889999999999999764

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the C-terminal, catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its C-terminal repeat is represented in thi

>cd08362 BphC5-RrK37_N_like N-terminal, non-catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Rhodococcus rhodochrous K37, and similar proteins

Probab=99.74  E-value=8.3e-17  Score=115.74  Aligned_cols=108  Identities=21%  Similarity=0.311  Sum_probs=81.4

Q ss_pred             eceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEEEE
Q 029285           73 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  152 (196)
Q Consensus        73 i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~p~~~~~~~hi~f~v  152 (196)
                      +.+++|+.|.|+|++++++||+++|||++....+      ..+|+..++...+++......        ..+..|++|.+
T Consensus         1 ~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~v   66 (120)
T cd08362           1 VTALRGVGLGVPDLAAAAAFYREVWGLSVVAEDD------GIVYLRATGSEHHILRLRRSD--------RNRLDVVSFSV   66 (120)
T ss_pred             CceeeEEEEecCCHHHHHHHHHhCcCcEEEEecC------CEEEEECCCCccEEEEeccCC--------CCCCceEEEEe
Confidence            3589999999999999999999999999875432      235676554333333322111        12457999999


Q ss_pred             C---CHHHHHHHHHHCCCeEEeeC------CCceEEEEEcCCCCeEEEEee
Q 029285          153 R---DVSKLKMILDKAGISYTLSK------SGRPAIFTRDPDANALEFTQV  194 (196)
Q Consensus       153 ~---dl~~~~~~l~~~G~~~~~~~------~g~~~~~~~DPdG~~iEl~e~  194 (196)
                      +   ++++++++++++|+++..++      .+++.++++||+||.|||.+.
T Consensus        67 ~~~~~l~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~  117 (120)
T cd08362          67 ASRADVDALARQVAARGGTVLSEPGATDDPGGGYGFRFFDPDGRLIEFSAD  117 (120)
T ss_pred             CCHHHHHHHHHHHHHcCCceecCCcccCCCCCceEEEEECCCCCEEEEEec
Confidence            4   78999999999999986542      356889999999999999874

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the N-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dioxyge

>cd07240 ED_TypeI_classII_N N-terminal domain of type I, class II extradiol dioxygenases; non-catalytic domain

Probab=99.74  E-value=1.3e-16  Score=114.03  Aligned_cols=106  Identities=21%  Similarity=0.294  Sum_probs=83.0

Q ss_pred             ceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeC-CeEEEEEecCCCCCCCCCCCCCCCceEEEEEE
Q 029285           74 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-AEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  152 (196)
Q Consensus        74 ~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g-~~~l~l~~~~~~~~~~~~p~~~~~~~hi~f~v  152 (196)
                      ++++|+.|.|+|++++++||+++|||++....+      ..+|+..+ +..+.+.....+         ..+..|++|.|
T Consensus         1 ~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~---------~~~~~h~~~~v   65 (117)
T cd07240           1 RRIAYAELEVPDLERALEFYTDVLGLTVLDRDA------GSVYLRCSEDDHHSLVLTEGD---------EPGVDALGFEV   65 (117)
T ss_pred             CceeEEEEecCCHHHHHHHHHhccCcEEEeecC------CeEEEecCCCCcEEEEEEeCC---------CCCceeEEEEc
Confidence            468999999999999999999999999987542      24778776 344444322211         13568999999


Q ss_pred             C---CHHHHHHHHHHCCCeEEeeC----CCceEEEEEcCCCCeEEEEee
Q 029285          153 R---DVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQV  194 (196)
Q Consensus       153 ~---dl~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~iEl~e~  194 (196)
                      +   ++++++++++++|+++...+    .+++.+++.||+||.+|+...
T Consensus        66 ~~~~~v~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~  114 (117)
T cd07240          66 ASEEDLEALAAHLEAAGVAPEEASDPEPGVGRGLRFQDPDGHLLELFVE  114 (117)
T ss_pred             CCHHHHHHHHHHHHHcCCceEEcCccCCCCceEEEEECCCCCEEEEEEc
Confidence            8   68889999999999986643    356899999999999999864

This family contains the N-terminal, non-catalytic, domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this fa

>cd08345 Fosfomycin_RP Fosfomycin resistant protein; inhibits the biological function of fosfomycin

Probab=99.73  E-value=9.4e-17  Score=114.26  Aligned_cols=105  Identities=23%  Similarity=0.399  Sum_probs=80.7

Q ss_pred             EEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEEEEC--CH
Q 029285           78 HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR--DV  155 (196)
Q Consensus        78 hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~p~~~~~~~hi~f~v~--dl  155 (196)
                      ||.|.|+|++++++||+++|||++..+.+      ..+|+..++..+.+...+...      ...++..|++|.|+  ++
T Consensus         1 Hv~l~v~d~~~s~~Fy~~~lg~~~~~~~~------~~~~~~~~~~~l~~~~~~~~~------~~~~~~~hiaf~v~~~d~   68 (113)
T cd08345           1 HITLIVKDLNKSIAFYRDILGAELIYSSS------KEAYFELAGLWICLMEEDSLQ------GPERTYTHIAFQIQSEEF   68 (113)
T ss_pred             CeeEEECCHHHHHHHHHHhcCCeeeeccC------ceeEEEecCeEEEeccCCCcC------CCCCCccEEEEEcCHHHH
Confidence            89999999999999999999999876432      235666666666655433211      12245679999995  89


Q ss_pred             HHHHHHHHHCCCeEEeeC----CCceEEEEEcCCCCeEEEEee
Q 029285          156 SKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQV  194 (196)
Q Consensus       156 ~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~iEl~e~  194 (196)
                      +++++++.++|+++....    .+++.+|++|||||.|||..-
T Consensus        69 ~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DPdG~~iEi~~~  111 (113)
T cd08345          69 DEYTERLKALGVEMKPERPRVQGEGRSIYFYDPDGHLLELHAG  111 (113)
T ss_pred             HHHHHHHHHcCCccCCCccccCCCceEEEEECCCCCEEEEEeC
Confidence            999999999999986431    257899999999999999864

This family contains three types of fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. The three types of fosfomycin resistance proteins, employ different mechanisms to render fosfomycin [(1R,2S)-epoxypropylphosphonic acid] inactive. FosB catalyzes the addition of L-cysteine to the epoxide ring of fosfomycin. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1. FosA catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive. Catalytic activities of both FosX and FosA are Mn(II)-dependent, but FosB is activated by Mg(II). Fosfomycin resistant proteins are evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd08359 Glo_EDI_BRP_like_22 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.73  E-value=2.6e-16  Score=113.04  Aligned_cols=109  Identities=17%  Similarity=0.171  Sum_probs=78.2

Q ss_pred             EEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCe--EEEEEecCCCCCC-CCCCCCCCCceEEEEEECC
Q 029285           78 HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPL-SGRPEHGGRDRHTCIAIRD  154 (196)
Q Consensus        78 hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~--~l~l~~~~~~~~~-~~~p~~~~~~~hi~f~v~d  154 (196)
                      ++.|.|+|++++++||+++|||++....+      ..+.+..++.  .+.+......... ...+..+.+ .|++|.|+|
T Consensus         4 ~~~l~v~D~~~s~~FY~~~lG~~~~~~~~------~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~-~~~~~~v~d   76 (119)
T cd08359           4 YPVIVTDDLAETADFYVRHFGFTVVFDSD------WYVSLRSPDGGVELAFMLPGHETVPAAQYQFQGQG-LILNFEVDD   76 (119)
T ss_pred             eeEEEECCHHHHHHHHHHhhCcEEEeccC------cEEEEecCCCceEEEEccCCCCCCcchhcccCCce-EEEEEEECC
Confidence            67899999999999999999999886421      1233444443  4444433222111 011222333 499999999


Q ss_pred             HHHHHHHHHHCCCeEEeeC----CCceEEEEEcCCCCeEEEEe
Q 029285          155 VSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQ  193 (196)
Q Consensus       155 l~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~iEl~e  193 (196)
                      ++++++++.++|+++..++    +|.+.++++|||||.|||.|
T Consensus        77 id~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DP~G~~ie~~~  119 (119)
T cd08359          77 VDAEYERLKAEGLPIVLPLRDEPWGQRHFIVRDPNGVLIDIVQ  119 (119)
T ss_pred             HHHHHHHHHhcCCCeeeccccCCCcceEEEEECCCCCEEEEEC
Confidence            9999999999999876442    46689999999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd07239 BphC5-RK37_C_like C-terminal, catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacterium Rhodococcus rhodochrous K37 and similar proteins

Probab=99.72  E-value=2.5e-16  Score=118.12  Aligned_cols=105  Identities=17%  Similarity=0.347  Sum_probs=79.9

Q ss_pred             ceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCe--EEEEEecCCCCCCCCCCCCCCCceEEEEE
Q 029285           74 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHTCIA  151 (196)
Q Consensus        74 ~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~--~l~l~~~~~~~~~~~~p~~~~~~~hi~f~  151 (196)
                      .+++|+.|.|+|++++++||+++|||++.....     ...+|+..++.  .+.+..  ..         .++..|++|.
T Consensus         3 ~~l~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~-----~~~~~l~~~~~~~~~~l~~--~~---------~~~~~hiaf~   66 (144)
T cd07239           3 VKISHVVLNSPDVDKTVAFYEDVLGFRVSDWLG-----DQMAFLRCNSDHHSIAIAR--GP---------HPSLNHVAFE   66 (144)
T ss_pred             ceeeEEEEECCCHHHHHHHHHhcCCCEEEEeeC-----CeEEEEECCCCcceEEEcc--CC---------CCceEEEEEE
Confidence            478999999999999999999999999875422     12467777643  333321  11         2367899999


Q ss_pred             ECCHHHHH---HHHHHCCCeEEeeC-----CCceEEEEEcCCCCeEEEEee
Q 029285          152 IRDVSKLK---MILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQV  194 (196)
Q Consensus       152 v~dl~~~~---~~l~~~G~~~~~~~-----~g~~~~~~~DPdG~~iEl~e~  194 (196)
                      |+|++++.   ++|+++|+++...+     .+.+.+||+||+||.|||.+.
T Consensus        67 v~d~~~l~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~yf~DPdG~~iE~~~~  117 (144)
T cd07239          67 MPSIDEVMRGIGRMIDKGIDILWGPGRHGPGDNTFAYFLDPGGFVIEYTSE  117 (144)
T ss_pred             CCCHHHHHHHHHHHHHcCCceeeCCcccCCCCCEEEEEECCCCcEEEeccC
Confidence            99888775   89999999986542     224678999999999999875

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the C-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dio

>cd07235 MRD Mitomycin C resistance protein (MRD)

Probab=99.71  E-value=2.9e-16  Score=113.37  Aligned_cols=112  Identities=21%  Similarity=0.294  Sum_probs=77.9

Q ss_pred             eeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeC-CeEEEEEecCCCCC-CCCCCCCCCCceEEEEEEC
Q 029285           76 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-AEMIHLMELPNPDP-LSGRPEHGGRDRHTCIAIR  153 (196)
Q Consensus        76 l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g-~~~l~l~~~~~~~~-~~~~p~~~~~~~hi~f~v~  153 (196)
                      ++||+|.|+|+++|++||+. |||++......    ...+++..+ +..+.|........ ....+...++..|++|.+.
T Consensus         1 ~~~i~l~V~D~~~a~~FY~~-LGf~~~~~~~~----~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~   75 (122)
T cd07235           1 LDAVGIVVADMAKSLDFYRR-LGFDFPEEADD----EPHVEAVLPGGVRLAWDTVESIRSFTPGWTPTGGHRIALAFLCE   75 (122)
T ss_pred             CceEEEEeccHHHHHHHHHH-hCceecCCcCC----CCcEEEEeCCCEEEEEEcccceeeecCCCCCCCCCcEEEEEEcC
Confidence            57999999999999999975 99998643321    123445555 45555543322110 0111222335568999875


Q ss_pred             ---CHHHHHHHHHHCCCeEEeeC----CCceEEEEEcCCCCeEEEE
Q 029285          154 ---DVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFT  192 (196)
Q Consensus       154 ---dl~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~iEl~  192 (196)
                         |+++++++|+++|+++..++    +|.+.++++|||||.|||+
T Consensus        76 ~~~dvd~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~  121 (122)
T cd07235          76 TPAEVDALYAELVGAGYPGHKEPWDAPWGQRYAIVKDPDGNLVDLF  121 (122)
T ss_pred             CHHHHHHHHHHHHHCCCCcCCCCccCCCCCEEEEEECCCCCEEEEe
Confidence               89999999999999876443    5668899999999999996

Mitomycin C (MC) is a naturally occurring antibiotic, and antitumor agent used in the treatment of cancer. Its antitumor activity is exerted primarily through monofunctional and bifunctional alkylation of DNA. MRD binds to MC and functions as a component of the MC exporting system. MC is bound to MRD by a stacking interaction between a His and a Trp. MRD adopts a structural fold similar to bleomycin resistance protein, glyoxalase I, and extradiol dioxygenases; and it has binding sites at an identical location to binding sites in these evolutionarily related enzymes.

>cd08354 Glo_EDI_BRP_like_13 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.71  E-value=4e-16  Score=112.23  Aligned_cols=113  Identities=27%  Similarity=0.518  Sum_probs=83.7

Q ss_pred             eeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCC-eEEEEEecCCCCCC-CC-CCCCCCCceEEEEEE
Q 029285           76 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA-EMIHLMELPNPDPL-SG-RPEHGGRDRHTCIAI  152 (196)
Q Consensus        76 l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~-~~l~l~~~~~~~~~-~~-~p~~~~~~~hi~f~v  152 (196)
                      +.|+.|+|.|++++++||+++|||++..+ +.+    ..+++..++ ..+.++........ .. .+....+..|++|.+
T Consensus         1 ~~~~~l~v~d~~~s~~Fy~~~lG~~~~~~-~~~----~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v   75 (122)
T cd08354           1 ILETALYVDDLEAAEAFYEDVLGLELMLK-EDR----RLAFFWVGGRGMLLLFDPGATSTPGGEIPPHGGSGPGHFAFAI   75 (122)
T ss_pred             CeEEEEEeCCHHHHHHHHHhccCCEEeec-CCC----ceEEEEcCCCcEEEEEecCCcccccCCCCCCCCCCccEEEEEc
Confidence            36899999999999999999999998864 211    236677776 45666654432110 00 111234667999998


Q ss_pred             C--CHHHHHHHHHHCCCeEEeeC---CCceEEEEEcCCCCeEEEEe
Q 029285          153 R--DVSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQ  193 (196)
Q Consensus       153 ~--dl~~~~~~l~~~G~~~~~~~---~g~~~~~~~DPdG~~iEl~e  193 (196)
                      +  |++++++++.++|+++....   .+++.++++|||||.|||.+
T Consensus        76 ~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~  121 (122)
T cd08354          76 PAEELAEWEAHLEAKGVAIESEVQWPRGGRSLYFRDPDGNLLELAT  121 (122)
T ss_pred             CHHHHHHHHHHHHhcCCceeccccCCCCeeEEEEECCCCCEEEEec
Confidence            5  89999999999999886543   46789999999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08343 ED_TypeI_classII_C C-terminal domain of type I, class II extradiol dioxygenases; catalytic domain

Probab=99.71  E-value=5.6e-16  Score=113.80  Aligned_cols=107  Identities=19%  Similarity=0.331  Sum_probs=80.8

Q ss_pred             eEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCe--EEEEEecCCCCCCCCCCCCCCCceEEEEEECC
Q 029285           77 HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD  154 (196)
Q Consensus        77 ~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~--~l~l~~~~~~~~~~~~p~~~~~~~hi~f~v~d  154 (196)
                      +||+|.|+|++++++||+++||+++......+ .....+|+..++.  .+.+.....          ..+..|++|.|+|
T Consensus         1 ~Hv~l~V~dl~~a~~Fy~~~lG~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~----------~~~~~hl~~~v~d   69 (131)
T cd08343           1 DHVVLRTPDVAATAAFYTEVLGFRVSDRVGDP-GVDAAAFLRCDEDHHDLALFPGPE----------RPGLHHVAFEVES   69 (131)
T ss_pred             CcEEEEcCCHHHHHHHHHhcCCCEEEEEEccC-CceeEEEEEcCCCcceEEEEcCCC----------CCCeeEEEEEcCC
Confidence            59999999999999999999999987654422 2234577777653  333333211          2467899999997


Q ss_pred             HH---HHHHHHHHCCCeEEeeC-----CCceEEEEEcCCCCeEEEEee
Q 029285          155 VS---KLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQV  194 (196)
Q Consensus       155 l~---~~~~~l~~~G~~~~~~~-----~g~~~~~~~DPdG~~iEl~e~  194 (196)
                      ++   +++++++++|+++...+     .+.+.++|+|||||.|||.+.
T Consensus        70 ~~~~~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~~DPdG~~iei~~~  117 (131)
T cd08343          70 LDDILRAADRLAANGIQIEFGPGRHGPGNNLFLYFRDPDGNRVELSAE  117 (131)
T ss_pred             HHHHHHHHHHHHHcCCeeEECCCccCCCCcEEEEEECCCCCEEEEEcC
Confidence            75   67899999999886542     235788999999999999874

This family contains the C-terminal, catalytic domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this family are

>cd08349 BLMA_like Bleomycin binding protein (BLMA) and similar proteins; BLMA confers bleomycin (Bm) resistance by directly binding to Bm

Probab=99.71  E-value=7.8e-16  Score=108.95  Aligned_cols=105  Identities=30%  Similarity=0.470  Sum_probs=80.3

Q ss_pred             EEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEEEECCHHHHH
Q 029285           80 GILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLK  159 (196)
Q Consensus        80 ~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~p~~~~~~~hi~f~v~dl~~~~  159 (196)
                      .|.|+|++++++||+++|||++....+.    ...+++..++..++|.........     ...+..|++|.++|+++++
T Consensus         3 ~i~v~d~~~s~~FY~~~lg~~~~~~~~~----~~~~~~~~~~~~~~l~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~   73 (112)
T cd08349           3 VLPVSDIERSLAFYRDVLGFEVDWEHPE----PGYAFLSRGGAQLMLSEHDGDEPV-----PLGRGGSVYIEVEDVDALY   73 (112)
T ss_pred             EEEECCHHHHHHHHHhccCeEEEEEcCC----CcEEEEEeCCEEEEEeccCCCCCC-----CCCCcEEEEEEeCCHHHHH
Confidence            6899999999999999999998875431    123556667777777655433211     2234569999999999999


Q ss_pred             HHHHHCCCe-EEee----CCCceEEEEEcCCCCeEEEEe
Q 029285          160 MILDKAGIS-YTLS----KSGRPAIFTRDPDANALEFTQ  193 (196)
Q Consensus       160 ~~l~~~G~~-~~~~----~~g~~~~~~~DPdG~~iEl~e  193 (196)
                      ++++++|+. +..+    ..|.+.++++||+||.|||.|
T Consensus        74 ~~l~~~G~~~~~~~~~~~~~g~~~~~~~DP~G~~ie~~~  112 (112)
T cd08349          74 AELKAKGADLIVYPPEDQPWGMREFAVRDPDGNLLRFGE  112 (112)
T ss_pred             HHHHHcCCcceecCccCCCcccEEEEEECCCCCEEEecC
Confidence            999999998 4333    245688999999999999986

BLMA also called Bleomycin resistance protein, confers Bm resistance by directly binding to Bm. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMA is produced by actinomycetes to protect themselves against their own lethal compound. BLMA has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMAs are dimers and each dimer binds to two Bm molecules at the Bm-binding pockets formed at the dimer interface; two Bm molecules are bound per dimer. BLMA belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. As for the large

>cd09012 Glo_EDI_BRP_like_24 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.70  E-value=3.8e-16  Score=113.38  Aligned_cols=113  Identities=17%  Similarity=0.141  Sum_probs=78.7

Q ss_pred             eeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeC-CeEEEEEecCCCCCCCC--CC-CCCCCceEEEEE
Q 029285           76 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-AEMIHLMELPNPDPLSG--RP-EHGGRDRHTCIA  151 (196)
Q Consensus        76 l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g-~~~l~l~~~~~~~~~~~--~p-~~~~~~~hi~f~  151 (196)
                      +.+|.|.|.|+++|++||++ |||+.......+.    .+++..+ +..++|...........  .+ ...++..|++|.
T Consensus         1 ~~~v~l~V~Dl~~s~~FY~~-lGf~~~~~~~~~~----~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~l~f~   75 (124)
T cd09012           1 MIFINLPVKDLEKSTAFYTA-LGFEFNPQFSDEK----AACMVISDNIFVMLLTEDFFQTFTPKPIADTKKSTEVLISLS   75 (124)
T ss_pred             CEEEEeecCCHHHHHHHHHH-CCCEEccccCCCC----eEEEEECCceEEEEEcHHHHhhccCCCcccCCCCCeEEEEEe
Confidence            36899999999999999987 8999875333222    2444454 45677765432110000  00 123345699999


Q ss_pred             EC---CHHHHHHHHHHCCCeEEeeC---CCceEEEEEcCCCCeEEEEe
Q 029285          152 IR---DVSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQ  193 (196)
Q Consensus       152 v~---dl~~~~~~l~~~G~~~~~~~---~g~~~~~~~DPdG~~iEl~e  193 (196)
                      |+   ++++++++++++|+++..++   .+++.+|++|||||.|||..
T Consensus        76 v~~~~~vd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~DPdG~~ie~~~  123 (124)
T cd09012          76 ADSREEVDELVEKALAAGGKEFREPQDHGFMYGRSFADLDGHLWEVLW  123 (124)
T ss_pred             CCCHHHHHHHHHHHHHCCCcccCCcccCCceEEEEEECCCCCEEEEEE
Confidence            98   58889999999999986544   23567899999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08350 BLMT_like BLMT, a bleomycin resistance protein encoded on the transposon Tn5, and similar proteins

Probab=99.70  E-value=5.5e-16  Score=112.03  Aligned_cols=104  Identities=25%  Similarity=0.374  Sum_probs=79.3

Q ss_pred             EEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEEEECCHHH
Q 029285           78 HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSK  157 (196)
Q Consensus        78 hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~p~~~~~~~hi~f~v~dl~~  157 (196)
                      ...|.|+|+++|++||++ |||++..+.+.     ..+++..++..++|.......     +  .....|++|.|+|+++
T Consensus         5 ~~~l~v~Dl~~s~~FY~~-lG~~~~~~~~~-----~~~~~~~~~~~l~l~~~~~~~-----~--~~~~~~~~~~v~dvd~   71 (120)
T cd08350           5 IPNLPSRDLDATEAFYAR-LGFSVGYRQAA-----GYMILRRGDLELHFFAHPDLD-----P--ATSPFGCCLRLPDVAA   71 (120)
T ss_pred             cceeEcCCHHHHHHHHHH-cCCEEEecCCC-----CEEEEEcCCEEEEEEecCcCC-----C--CCCcceEEEEeCCHHH
Confidence            457999999999999999 99998765432     234566677788887643211     1  1123579999999999


Q ss_pred             HHHHHHHCCCeEE-------ee----CCCceEEEEEcCCCCeEEEEee
Q 029285          158 LKMILDKAGISYT-------LS----KSGRPAIFTRDPDANALEFTQV  194 (196)
Q Consensus       158 ~~~~l~~~G~~~~-------~~----~~g~~~~~~~DPdG~~iEl~e~  194 (196)
                      ++++|+++|+.+.       ..    ++|.+.++++|||||.|||.|.
T Consensus        72 ~~~~l~~~G~~~~~~~~~~~~~~~~~~~g~~~~~~~DPdG~~ie~~~~  119 (120)
T cd08350          72 LHAEFRAAGLPETGSGIPRITPPEDQPWGMREFALVDPDGNLLRFGQP  119 (120)
T ss_pred             HHHHHHHhCccccccCCCcccCCcCCCCceeEEEEECCCCCEEEeecC
Confidence            9999999999742       11    2577899999999999999884

BLMT is a bleomycin (Bm) resistance protein, encoded by the ble gene on the transposon Tn5. This protein confers a survival advantage to Escherichia coli host cells. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMT has strong binding affinity to Bm and it protects against this lethal compound through drug sequestering. BLMT has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMT is a dimer with two Bm-binding pockets formed at the dimer interface.

>cd06587 Glo_EDI_BRP_like This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

Probab=99.70  E-value=6.2e-16  Score=107.69  Aligned_cols=108  Identities=30%  Similarity=0.442  Sum_probs=86.7

Q ss_pred             EEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEEEECCHHH
Q 029285           78 HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSK  157 (196)
Q Consensus        78 hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~p~~~~~~~hi~f~v~dl~~  157 (196)
                      |+.|.|+|++++++||+++||+++......  .....+++..++..++|...++....    ..+.+..|++|.|+|+++
T Consensus         1 Hi~i~~~d~~~~~~fy~~~lg~~~~~~~~~--~~~~~~~~~~~~~~i~l~~~~~~~~~----~~~~~~~~~~~~v~~~~~   74 (112)
T cd06587           1 HVGLTVSDLEAAVAFYEEVLGFEVLFRNGN--GGAEFAVLGLGGTRLELFEGDEPAPA----PSGGGGVHLAFEVDDVDA   74 (112)
T ss_pred             CcceeeCCHHHHHHHHHhccCCEEEEeecc--CCEEEEEEecCCceEEEecCCCCCCc----ccCCCeeEEEEECCCHHH
Confidence            899999999999999999999998876542  12345667767778888876654321    234567899999999999


Q ss_pred             HHHHHHHCCCeEEeeC----CCceEEEEEcCCCCeEEE
Q 029285          158 LKMILDKAGISYTLSK----SGRPAIFTRDPDANALEF  191 (196)
Q Consensus       158 ~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~iEl  191 (196)
                      ++++|.++|+.+...+    .+...+++.||+|+.|||
T Consensus        75 ~~~~l~~~g~~~~~~~~~~~~~~~~~~~~Dp~G~~~~~  112 (112)
T cd06587          75 AYERLKAAGVEVLGEPREEPWGGRVAYFRDPDGNLIEL  112 (112)
T ss_pred             HHHHHHHcCCcccCCCcCCCCCcEEEEEECCCCcEEeC
Confidence            9999999999886653    457999999999999986

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain clas

>PRK06724 hypothetical protein; Provisional

Probab=99.70  E-value=5.6e-16  Score=114.03  Aligned_cols=107  Identities=22%  Similarity=0.308  Sum_probs=74.8

Q ss_pred             eceeeEEEEEcCCHHHHHHHHHhcc---CCEEeeecCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEE
Q 029285           73 VVSVHHVGILCENLERSLEFYQNIL---GLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTC  149 (196)
Q Consensus        73 i~~l~hv~l~v~Dl~~a~~FY~~vL---G~~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~p~~~~~~~hi~  149 (196)
                      +.+++||.|.|+|+++|++||+++|   |++.....         .| ..++..+.|.......     + ...+..|+|
T Consensus         5 ~~~i~Hv~l~V~Dle~s~~FY~~vlg~lg~~~~~~~---------~~-~~g~~~l~l~~~~~~~-----~-~~~g~~h~a   68 (128)
T PRK06724          5 RAGIHHIEFWVANLEESISFYDMLFSIIGWRKLNEV---------AY-STGESEIYFKEVDEEI-----V-RTLGPRHIC   68 (128)
T ss_pred             CcccCEEEEEeCCHHHHHHHHHHHHhhCCcEEeeeE---------ee-eCCCeeEEEecCCccc-----c-CCCCceeEE
Confidence            4579999999999999999999966   56543210         11 1223334443322110     1 123568999


Q ss_pred             EEE---CCHHHHHHHHHHCCCeEEeeC-------CCceEEEEEcCCCCeEEEEeec
Q 029285          150 IAI---RDVSKLKMILDKAGISYTLSK-------SGRPAIFTRDPDANALEFTQVD  195 (196)
Q Consensus       150 f~v---~dl~~~~~~l~~~G~~~~~~~-------~g~~~~~~~DPdG~~iEl~e~~  195 (196)
                      |.|   +++++++++|+++|+++..++       +|.+.+||+|||||.|||..-+
T Consensus        69 f~v~~~~dvd~~~~~l~~~G~~~~~~p~~~~~~~~g~~~~~f~DPdG~~iEl~~~~  124 (128)
T PRK06724         69 YQAINRKVVDEVAEFLSSTKIKIIRGPMEMNHYSEGYYTIDFYDPNGFIIEVAYTP  124 (128)
T ss_pred             EecCChHHHHHHHHHHHHCCCEEecCCcccCCCCCCEEEEEEECCCCCEEEEEeCC
Confidence            998   589999999999999885432       2347899999999999997643

>cd08357 Glo_EDI_BRP_like_18 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.69  E-value=7.9e-16  Score=111.12  Aligned_cols=111  Identities=22%  Similarity=0.294  Sum_probs=75.0

Q ss_pred             EEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCeEEEEEecCCCCCC--C-CCCCCCCCceEEEE--EE
Q 029285           78 HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPL--S-GRPEHGGRDRHTCI--AI  152 (196)
Q Consensus        78 hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~--~-~~p~~~~~~~hi~f--~v  152 (196)
                      ||+|.|+|+++|++||+++|||++....+  .    .+.+..++..+.+.........  . .......+..|++|  .+
T Consensus         2 Hi~l~v~Dl~~s~~FY~~~lG~~~~~~~~--~----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~   75 (125)
T cd08357           2 HLAIPVRDLEAARAFYGDVLGCKEGRSSE--T----WVDFDFFGHQLVAHLSPNFNADASDNAVDGHPVPVPHFGLILSE   75 (125)
T ss_pred             eEEEEeCCHHHHHHHHHHhcCCEEeeccC--C----cccccccCcEEEEEeccCCCcccccCCCCCCccCCceEEEEEeH
Confidence            99999999999999999999999865321  1    1223344444444433221110  0 01112223457655  56


Q ss_pred             CCHHHHHHHHHHCCCeEEeeC--------CCceEEEEEcCCCCeEEEEee
Q 029285          153 RDVSKLKMILDKAGISYTLSK--------SGRPAIFTRDPDANALEFTQV  194 (196)
Q Consensus       153 ~dl~~~~~~l~~~G~~~~~~~--------~g~~~~~~~DPdG~~iEl~e~  194 (196)
                      +|+++++++|+++|+++..++        .+.+.+|++|||||.|||..+
T Consensus        76 ~dv~~~~~~l~~~g~~~~~~p~~~~~~~~~~~~~~~~~DPdG~~iE~~~~  125 (125)
T cd08357          76 EEFDALAERLEAAGVEFLIEPYTRFEGQPGEQETFFLKDPSGNALEFKAF  125 (125)
T ss_pred             HHHHHHHHHHHHCCCcEecCcceeccCCcCceeEEEEECCCCCEEEEeeC
Confidence            799999999999999887432        235889999999999999863

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07266 HPCD_N_class_II N-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD); belongs to the type I class II family of extradiol dioxygenases

Probab=99.69  E-value=7.7e-16  Score=111.02  Aligned_cols=107  Identities=23%  Similarity=0.311  Sum_probs=79.2

Q ss_pred             eceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeC--CeEEEEEecCCCCCCCCCCCCCCCceEEEE
Q 029285           73 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG--AEMIHLMELPNPDPLSGRPEHGGRDRHTCI  150 (196)
Q Consensus        73 i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g--~~~l~l~~~~~~~~~~~~p~~~~~~~hi~f  150 (196)
                      ++++.|+.|.|+|++++++||+++|||++....+      ..+|+...  +....+......         .++..|++|
T Consensus         2 ~~~i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~---------~~~~~hi~~   66 (121)
T cd07266           2 ILRLGHVELRVTDLEKSREFYVDVLGLVETEEDD------DRIYLRGLEEFIHHSLVLTKAP---------VAGLGHIAF   66 (121)
T ss_pred             cceeeEEEEEcCCHHHHHHHHHhccCCEEeccCC------CeEEEEecCCCceEEEEEeeCC---------CCceeEEEE
Confidence            5689999999999999999999999999876432      13556532  222333322111         135789999


Q ss_pred             EEC---CHHHHHHHHHHCCCeEEee----C-CCceEEEEEcCCCCeEEEEee
Q 029285          151 AIR---DVSKLKMILDKAGISYTLS----K-SGRPAIFTRDPDANALEFTQV  194 (196)
Q Consensus       151 ~v~---dl~~~~~~l~~~G~~~~~~----~-~g~~~~~~~DPdG~~iEl~e~  194 (196)
                      .|.   ++++++++++++|+++...    . .+++.+|+.|||||.|||+..
T Consensus        67 ~v~~~~dv~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DPdG~~ve~~~~  118 (121)
T cd07266          67 RVRSEEDLDKAEAFFQELGLPTEWVEAGEEPGQGRALRVEDPLGFPIEFYAE  118 (121)
T ss_pred             ECCCHHHHHHHHHHHHHcCCCcccccCCcCCCCccEEEEECCCCCEEEEEec
Confidence            995   8888999999999988643    1 235789999999999999863

This subfamily contains the N-terminal, non-catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of extradiol dioxygenases. The class III 3,4-dihydroxyphenylacetate 2,3-dioxygenases belong to a differ

>cd08356 Glo_EDI_BRP_like_17 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.68  E-value=9.3e-16  Score=110.11  Aligned_cols=100  Identities=18%  Similarity=0.213  Sum_probs=76.4

Q ss_pred             EEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEEEECCHHHH
Q 029285           79 VGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKL  158 (196)
Q Consensus        79 v~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~p~~~~~~~hi~f~v~dl~~~  158 (196)
                      ..|.|+|+++|++||++ |||++....+      ..+++..++..+.|........        ....+++|.|+|++++
T Consensus         5 ~~l~v~Dl~~s~~FY~~-LGf~~~~~~~------~~~~l~~~~~~l~l~~~~~~~~--------~~~~~~~~~v~did~~   69 (113)
T cd08356           5 PFIPAKDFAESKQFYQA-LGFELEWEND------NLAYFRLGNCAFYLQDYYVKDW--------AENSMLHLEVDDLEAY   69 (113)
T ss_pred             eccccccHHHHHHHHHH-hCCeeEecCC------CEEEEEcCCEEEEeecCCCccc--------ccCCEEEEEECCHHHH
Confidence            46889999999999988 9999987532      2477888877776654221111        1235799999999999


Q ss_pred             HHHHHHCCCeEE---------eeCCCceEEEEEcCCCCeEEEEe
Q 029285          159 KMILDKAGISYT---------LSKSGRPAIFTRDPDANALEFTQ  193 (196)
Q Consensus       159 ~~~l~~~G~~~~---------~~~~g~~~~~~~DPdG~~iEl~e  193 (196)
                      +++|+++|+++.         ..++|.+.++|+|||||.|+|.|
T Consensus        70 ~~~l~~~G~~~~~~~~~~~~~~~~~g~r~f~~~DPdGn~~~~~~  113 (113)
T cd08356          70 YEHIKALGLPKKFPGVKLPPITQPWWGREFFLHDPSGVLWHIGQ  113 (113)
T ss_pred             HHHHHHcCCcccccceecCccccCCCcEEEEEECCCccEEEeeC
Confidence            999999998642         12467899999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07254 Glo_EDI_BRP_like_20 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.68  E-value=2.6e-15  Score=108.21  Aligned_cols=107  Identities=24%  Similarity=0.431  Sum_probs=77.4

Q ss_pred             eEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEEEECC--
Q 029285           77 HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD--  154 (196)
Q Consensus        77 ~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~p~~~~~~~hi~f~v~d--  154 (196)
                      .|+.|.|+|++++.+||+++||++.....+  .   ...|. .++..+.+........    +  .++..|++|.+++  
T Consensus         3 ~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~--~---~~~~~-~~~~~~~~~~~~~~~~----~--~~~~~h~~f~v~~~~   70 (120)
T cd07254           3 FHVALNVDDLEASIAFYSKLFGVEPTKVRD--D---YAKFL-LEDPRLNFVLNERPGA----P--GGGLNHLGVQVDSAE   70 (120)
T ss_pred             EEEEEEeCCHHHHHHHHHHHhCCeEecccC--C---eeEEE-ecCCceEEEEecCCCC----C--CCCeeEEEEEeCCHH
Confidence            599999999999999999999999865432  1   12333 3333344433222111    1  1467899999987  


Q ss_pred             -HHHHHHHHHHCCCeEEeeCC------CceEEEEEcCCCCeEEEEeec
Q 029285          155 -VSKLKMILDKAGISYTLSKS------GRPAIFTRDPDANALEFTQVD  195 (196)
Q Consensus       155 -l~~~~~~l~~~G~~~~~~~~------g~~~~~~~DPdG~~iEl~e~~  195 (196)
                       ++++++++.++|+++...+.      +.+.+|++|||||.|||++..
T Consensus        71 dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~  118 (120)
T cd07254          71 EVAEAKARAEAAGLPTFKEEDTTCCYAVQDKVWVTDPDGNAWEVFVTL  118 (120)
T ss_pred             HHHHHHHHHHHcCCeEEccCCcccccCCcceEEEECCCCCEEEEEEee
Confidence             78899999999999875432      246799999999999999864

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and types I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07258 PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=99.68  E-value=1.1e-15  Score=114.29  Aligned_cols=104  Identities=18%  Similarity=0.273  Sum_probs=77.8

Q ss_pred             eEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCe-EEEEEecCCCCCCCCCCCCCCCceEEEEEECCH
Q 029285           77 HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE-MIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDV  155 (196)
Q Consensus        77 ~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~-~l~l~~~~~~~~~~~~p~~~~~~~hi~f~v~dl  155 (196)
                      +||.|.|+|++++++||+++|||++..+...     ..+|+...+. ..+.+...        +...++++|++|.|+|+
T Consensus         1 ~Hv~l~V~Dle~s~~Fy~~vLG~~~~~~~~~-----~~~~l~~~~~~~~h~~~~~--------~~~~~gl~Hiaf~v~~~   67 (141)
T cd07258           1 GHVVIGSENFEASRDSLVEDFGFRVSDLIED-----RIVFMRCHPNPFHHTFAVG--------PASSSHFHHVNFMVTDI   67 (141)
T ss_pred             CcEEEecCCHHHHHHHHHhcCCCEeeeeeCC-----EEEEEEcCCCCCcceeeec--------cCCCCceEEEEEECCCH
Confidence            5999999999999999999999998765321     3577775432 22333211        11235889999999865


Q ss_pred             ---HHHHHHHHHCCCeEEeeC-----CCceEEEEEcCCCCeEEEEe
Q 029285          156 ---SKLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQ  193 (196)
Q Consensus       156 ---~~~~~~l~~~G~~~~~~~-----~g~~~~~~~DPdG~~iEl~e  193 (196)
                         ++++++|+++|+++...+     .+.+.+|++||||+.|||..
T Consensus        68 ~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~  113 (141)
T cd07258          68 DDIGKALYRIKAHDVKVVFGPGRHPPSDSIFFYFLDPDGITVEYSF  113 (141)
T ss_pred             HHHHHHHHHHHHCCCcEEeCCceECCCCCEEEEEECCCCCEEEEEe
Confidence               567999999999886442     34688999999999999975

This subfamily contains the C-terminal, catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as for other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>TIGR03211 catechol_2_3 catechol 2,3 dioxygenase

Probab=99.68  E-value=1.3e-15  Score=126.90  Aligned_cols=114  Identities=20%  Similarity=0.327  Sum_probs=81.5

Q ss_pred             CCceeceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCc-eeEEEEeCCeE--EEEEecCCCCCCCCCCCCCCCc
Q 029285           69 IDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPY-RGAWLWVGAEM--IHLMELPNPDPLSGRPEHGGRD  145 (196)
Q Consensus        69 ~~~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~-~~~~l~~g~~~--l~l~~~~~~~~~~~~p~~~~~~  145 (196)
                      .++.+.+++||+|.|+|++++++||+++|||++..+...+.... ..+|+..++..  +.+..  .       + ..+..
T Consensus       139 ~~~~~~~i~Hi~l~V~Dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-------~-~~g~~  208 (303)
T TIGR03211       139 RGVGARRLDHCLLYGEDVAENTRFFTEVLGFRLTEQVVLGDGKEQAAAWLSVSNKAHDIAFVG--D-------P-EPGKL  208 (303)
T ss_pred             CCcCceeEEEEeEEeCCHHHHHHHHHHhcCCEEEeeEEcCCCcEEEEEEEEcCCCCcccceec--C-------C-CCCce
Confidence            44667899999999999999999999999999875432222211 34566554321  21111  0       1 12347


Q ss_pred             eEEEEEECCH---HHHHHHHHHCCCeEEeeC--C---CceEEEEEcCCCCeEEEE
Q 029285          146 RHTCIAIRDV---SKLKMILDKAGISYTLSK--S---GRPAIFTRDPDANALEFT  192 (196)
Q Consensus       146 ~hi~f~v~dl---~~~~~~l~~~G~~~~~~~--~---g~~~~~~~DPdG~~iEl~  192 (196)
                      +|+||.|+|+   ++++++|+++|+++..++  .   +++.+||+|||||.|||.
T Consensus       209 ~Hiaf~v~~~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iEl~  263 (303)
T TIGR03211       209 HHVSFFLDSWEDVLKAADVMSKNDVSIDIGPTRHGITRGQTIYFFDPSGNRNETF  263 (303)
T ss_pred             EEEEEEcCCHHHHHHHHHHHHhCCCceeeCCcccCCCCceEEEEECCCCCEEEEe
Confidence            8999999964   457889999999986543  1   257899999999999997

Members of this family all are enzymes active as catechol 2,3 dioxygenase (1.13.11.2), although some members have highly significant activity on catechol derivatives such as 3-methylcatechol, 3-chlorocatechol, and 4-chlorocatechol (see Mars, et al.). This enzyme is also called metapyrocatechase, as it performs a meta-cleavage (an extradiol ring cleavage), in contrast to the ortho-cleavage (intradiol ring cleavage)performed by catechol 1,2-dioxygenase (EC 1.13.11.1), also called pyrocatechase.

>cd07262 Glo_EDI_BRP_like_19 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.67  E-value=2.7e-15  Score=108.43  Aligned_cols=107  Identities=23%  Similarity=0.319  Sum_probs=75.8

Q ss_pred             eeEEEEEcCCHHHHHHHHHhc---cCCEEeeecCCCCCCceeEEEEeC--CeEEEEEecCCCCCCCCCCCCCCCceEEEE
Q 029285           76 VHHVGILCENLERSLEFYQNI---LGLEINEARPHDKLPYRGAWLWVG--AEMIHLMELPNPDPLSGRPEHGGRDRHTCI  150 (196)
Q Consensus        76 l~hv~l~v~Dl~~a~~FY~~v---LG~~~~~~~~~~~~~~~~~~l~~g--~~~l~l~~~~~~~~~~~~p~~~~~~~hi~f  150 (196)
                      ++|+.|.|+|+++|++||+++   ||+++..+.+  .   ...++..+  +..+.+.......     +...++..|++|
T Consensus         1 l~hv~l~v~d~~~s~~FY~~~f~~lg~~~~~~~~--~---~~~~~~~~~~~~~~~l~~~~~~~-----~~~~~~~~hi~f   70 (123)
T cd07262           1 IDHVTLGVNDLERARAFYDAVLAPLGIKRVMEDG--P---GAVGYGKGGGGPDFWVTKPFDGE-----PATAGNGTHVAF   70 (123)
T ss_pred             CcEEEEecCcHHHHHHHHHHHHhhcCceEEeecC--C---ceeEeccCCCCceEEEeccccCC-----CCCCCCceEEEE
Confidence            579999999999999999998   6999875431  1   11233333  3466665432211     111223479999


Q ss_pred             EECC---HHHHHHHHHHCCCeEEeeC-------CCceEEEEEcCCCCeEEEE
Q 029285          151 AIRD---VSKLKMILDKAGISYTLSK-------SGRPAIFTRDPDANALEFT  192 (196)
Q Consensus       151 ~v~d---l~~~~~~l~~~G~~~~~~~-------~g~~~~~~~DPdG~~iEl~  192 (196)
                      .|++   ++++++++.++|+.+..++       .+.+.+|++|||||.|||+
T Consensus        71 ~v~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~DPdG~~ie~~  122 (123)
T cd07262          71 AAPSREAVDAFHAAALAAGGTDEGAPGLRPHYGPGYYAAYVRDPDGNKIEAV  122 (123)
T ss_pred             ECCCHHHHHHHHHHHHHcCCccCCCCCCCCCCCCCeEEEEEECCCCCEEEEe
Confidence            9996   7888999999999876543       1245789999999999996

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>PF12681 Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B 1JIF_B 1JIE_B 1QTO_A 3OXH_A 2PJS_A 2RBB_A 3SK1_B 3SK2_B 3RRI_A

Probab=99.66  E-value=4.1e-15  Score=104.78  Aligned_cols=100  Identities=28%  Similarity=0.532  Sum_probs=72.8

Q ss_pred             EEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCC----eEEEEEecCCCCCCCCCCCCCCCceEEEEEECCHH
Q 029285           81 ILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA----EMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVS  156 (196)
Q Consensus        81 l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~----~~l~l~~~~~~~~~~~~p~~~~~~~hi~f~v~dl~  156 (196)
                      |.|+|++++++||+++|||++....+      ..+.+..+.    ....+...+..      +....+..|++|.|+|++
T Consensus         1 l~v~d~~~a~~FY~~~lg~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~v~dv~   68 (108)
T PF12681_consen    1 LPVSDLEAAAAFYEDVLGFEVVFDDP------DYVDFSLGFRFHDGVIEFLQFPDP------PGPPGGGFHLCFEVEDVD   68 (108)
T ss_dssp             EEESSHHHHHHHHHHTTTSEEEEEET------SEEEEEETEEEEEEEEEEEEEESS------SSSSSSEEEEEEEESHHH
T ss_pred             CccCCHHHHHHHHHHhcCCEEEEeCC------CeEEEEeccchhhhhHHHccCCcc------ccCCCceeEEEEEEcCHH
Confidence            68999999999999999999998433      123444432    12333333221      112346689999999999


Q ss_pred             HHHHHHHHCCCeEEee----CCCceEEEEEcCCCCeEEEE
Q 029285          157 KLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFT  192 (196)
Q Consensus       157 ~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdG~~iEl~  192 (196)
                      +++++++++|+++..+    +.|.+.+++.|||||.|||+
T Consensus        69 ~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~ie~~  108 (108)
T PF12681_consen   69 ALYERLKELGAEIVTEPRDDPWGQRSFYFIDPDGNRIEFC  108 (108)
T ss_dssp             HHHHHHHHTTSEEEEEEEEETTSEEEEEEE-TTS-EEEEE
T ss_pred             HHHHHHHHCCCeEeeCCEEcCCCeEEEEEECCCCCEEEeC
Confidence            9999999999997543    35679999999999999985

...

>cd07238 Glo_EDI_BRP_like_5 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.66  E-value=4.7e-15  Score=105.58  Aligned_cols=102  Identities=18%  Similarity=0.168  Sum_probs=75.3

Q ss_pred             EEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCC---eEEEEEecCCCCCCCCCCCCCCCceEEEEEECC
Q 029285           78 HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA---EMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD  154 (196)
Q Consensus        78 hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~---~~l~l~~~~~~~~~~~~p~~~~~~~hi~f~v~d  154 (196)
                      +..|+|+|++++++||+++|||+.....   .   ..+++..++   ..+.+......         +....|++|.|+|
T Consensus         3 ~~~l~v~Dl~~s~~FY~~~lG~~~~~~~---~---~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~i~~~v~d   67 (112)
T cd07238           3 VPNLPVADPEAAAAFYADVLGLDVVMDH---G---WIATFASPQNMTVQVSLATEGGT---------ATVVPDLSIEVDD   67 (112)
T ss_pred             cceEecCCHHHHHHHHHHhcCceEEEcC---C---ceEEEeecCCCCcEEEEecCCCC---------CCCCCEEEEEeCC
Confidence            3478999999999999999999986431   1   223344332   34444433211         1234699999999


Q ss_pred             HHHHHHHHHHCCCeEEeeC----CCceEEEEEcCCCCeEEEEee
Q 029285          155 VSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQV  194 (196)
Q Consensus       155 l~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~iEl~e~  194 (196)
                      +++++++|+++|+.+..++    +|.+.+++.|||||.|+|.+.
T Consensus        68 ~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DP~Gn~i~~~~~  111 (112)
T cd07238          68 VDAALARAVAAGFAIVYGPTDEPWGVRRFFVRDPFGKLVNILTH  111 (112)
T ss_pred             HHHHHHHHHhcCCeEecCCccCCCceEEEEEECCCCCEEEEEEc
Confidence            9999999999999986543    456889999999999999874

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structure of this family is a that of a strand-swapped dimer.

>cd07261 Glo_EDI_BRP_like_11 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.66  E-value=4.8e-15  Score=105.76  Aligned_cols=106  Identities=22%  Similarity=0.265  Sum_probs=77.8

Q ss_pred             EEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEe-CCeEEEEEecCCCCCCCCCCCCCCCceEEEEEECC---
Q 029285           79 VGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD---  154 (196)
Q Consensus        79 v~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~-g~~~l~l~~~~~~~~~~~~p~~~~~~~hi~f~v~d---  154 (196)
                      +.|.|+|+++|++||+++||+++....+  .    .+++.. ++..+.++.......   .+...++..|++|.+++   
T Consensus         2 ~~l~v~d~~~a~~FY~~~lg~~~~~~~~--~----~~~~~~~~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~v~~~~~   72 (114)
T cd07261           2 VLLYVEDPAASAEFYSELLGREPVELSP--T----FALFVLGSGVKLGLWSRHTVEP---ASDATGGGSELAFMVDDGAA   72 (114)
T ss_pred             EEEEECCHHHHHHHHHHHcCCCccCCCC--c----eEEEEeCCCcEEEEeeccccCC---CCCCCCCceEEEEEcCCHHH
Confidence            6799999999999999999999775322  1    234444 456777776443221   11123456799999985   


Q ss_pred             HHHHHHHHHHCCCeEEeeC---CCceEEEEEcCCCCeEEEEe
Q 029285          155 VSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQ  193 (196)
Q Consensus       155 l~~~~~~l~~~G~~~~~~~---~g~~~~~~~DPdG~~iEl~e  193 (196)
                      ++++++++.++|+++..++   ..++.++++|||||.|||+.
T Consensus        73 ~~~~~~~~~~~g~~v~~~~~~~~~g~~~~~~DPdGn~ie~~~  114 (114)
T cd07261          73 VDALYAEWQAKGVKIIQEPTEMDFGYTFVALDPDGHRLRVFA  114 (114)
T ss_pred             HHHHHHHHHHCCCeEecCccccCCccEEEEECCCCCEEEeeC
Confidence            8889999999999987653   22478999999999999973

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>TIGR02295 HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase

Probab=99.65  E-value=3.6e-15  Score=123.66  Aligned_cols=115  Identities=26%  Similarity=0.393  Sum_probs=82.1

Q ss_pred             CCceeceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCe--EEEEEecCCCCCCCCCCCCCCCce
Q 029285           69 IDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDR  146 (196)
Q Consensus        69 ~~~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~--~l~l~~~~~~~~~~~~p~~~~~~~  146 (196)
                      .++.+++++||+|.|+|+++|++||+++|||++..............|+..++.  .+.+..           ..+++++
T Consensus       130 ~~~~~~~i~Hv~l~v~dl~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~  198 (294)
T TIGR02295       130 RGVSPVRLDHFNVFVPDVQRALRFYKEELGFRVTEYTEDDEGNLAAAWLHRKGGVHDIALTN-----------GNGPRLH  198 (294)
T ss_pred             CCccceeeeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCcEEEEEEecCCCcCceEeec-----------CCCCcee
Confidence            355788999999999999999999999999998765433222233456654332  122211           1134789


Q ss_pred             EEEEEECCH---HHHHHHHHHCCCe--EEeeC--C---CceEEEEEcCCCCeEEEEee
Q 029285          147 HTCIAIRDV---SKLKMILDKAGIS--YTLSK--S---GRPAIFTRDPDANALEFTQV  194 (196)
Q Consensus       147 hi~f~v~dl---~~~~~~l~~~G~~--~~~~~--~---g~~~~~~~DPdG~~iEl~e~  194 (196)
                      |+||.|+|.   ++++++|+++|++  +...+  .   +...+|++||+||.|||++.
T Consensus       199 Hiaf~v~d~~~v~~~~~~l~~~G~~~~~~~~p~~~~~~~~~~~y~~DP~G~~iEl~~~  256 (294)
T TIGR02295       199 HIAYWVHDPLNIIKACDILASAGLSDSIERGPGRHGVSNAFFLYLRDPDGHRIELYTG  256 (294)
T ss_pred             eEEEEcCCHHHHHHHHHHHHhCCCCcccccCCccCCCCcceEEEEECCCCCEEEEEec
Confidence            999999984   4568899999987  54332  1   24679999999999999864

The enzyme from Bacillus brevis contains manganese.

>cd08344 MhqB_like_N N-terminal domain of MhqB, a type I extradiol dioxygenase, and similar proteins

Probab=99.65  E-value=5e-15  Score=105.77  Aligned_cols=100  Identities=26%  Similarity=0.400  Sum_probs=71.1

Q ss_pred             eeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEe-CCe--EEEEEecCCCCCCCCCCCCCCCceE--EE
Q 029285           75 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAE--MIHLMELPNPDPLSGRPEHGGRDRH--TC  149 (196)
Q Consensus        75 ~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~-g~~--~l~l~~~~~~~~~~~~p~~~~~~~h--i~  149 (196)
                      +++||+|.|.|++++++||+ .|||++..+.+       ..++.. ++.  .+.+...  .         .....|  +.
T Consensus         2 ~i~hv~l~v~d~~~s~~FY~-~lG~~~~~~~~-------~~~~~~~~~~~~~~~~~~~--~---------~~~~~~~~~~   62 (112)
T cd08344           2 SIDHFALEVPDLEVARRFYE-AFGLDVREEGD-------GLELRTAGNDHRWARLLEG--A---------RKRLAYLSFG   62 (112)
T ss_pred             ceeEEEEecCCHHHHHHHHH-HhCCcEEeecC-------ceEEEecCCCceEEEeecC--C---------CCceeeEEEE
Confidence            68999999999999999998 69999875421       133333 222  2323211  1         112344  44


Q ss_pred             EEECCHHHHHHHHHHCCCeEEeeC--CCceEEEEEcCCCCeEEEEe
Q 029285          150 IAIRDVSKLKMILDKAGISYTLSK--SGRPAIFTRDPDANALEFTQ  193 (196)
Q Consensus       150 f~v~dl~~~~~~l~~~G~~~~~~~--~g~~~~~~~DPdG~~iEl~e  193 (196)
                      +.++|+++++++|+++|+++...+  .+.+.+||+|||||.|||..
T Consensus        63 ~~~~d~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~DP~Gn~iel~~  108 (112)
T cd08344          63 IFEDDFAAFARHLEAAGVALAAAPPGADPDGVWFRDPDGNLLQVKV  108 (112)
T ss_pred             eEhhhHHHHHHHHHHcCCceecCCCcCCCCEEEEECCCCCEEEEec
Confidence            455799999999999999986543  34578999999999999985

This subfamily contains the N-terminal, non-catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07251 Glo_EDI_BRP_like_10 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.65  E-value=5.4e-15  Score=106.03  Aligned_cols=110  Identities=20%  Similarity=0.277  Sum_probs=79.1

Q ss_pred             EEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCC--CCCCCceEEEEEE---C
Q 029285           79 VGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRP--EHGGRDRHTCIAI---R  153 (196)
Q Consensus        79 v~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~p--~~~~~~~hi~f~v---~  153 (196)
                      |.|.|+|+++|.+||+++|||++..+ +.+    ...++..++..++++..+........+  ..+.+..|++|.+   +
T Consensus         2 i~l~v~d~~~a~~FY~~~lg~~~~~~-~~~----~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (121)
T cd07251           2 ITLGVADLARSRAFYEALLGWKPSAD-SND----GVAFFQLGGLVLALFPREELAKDAGVPVPPPGFSGITLAHNVRSEE   76 (121)
T ss_pred             eeEeeCCHHHHHHHHHHhcCceeccc-CCC----ceEEEEcCCeEEEEecchhhhhhcCCCCCCCCccceEEEEEcCCHH
Confidence            78999999999999999999998765 111    235677777788887644221111111  1222334566665   5


Q ss_pred             CHHHHHHHHHHCCCeEEeeC----CCceEEEEEcCCCCeEEEEe
Q 029285          154 DVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQ  193 (196)
Q Consensus       154 dl~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~iEl~e  193 (196)
                      |++++++++++.|+++..++    +|++.++++||+||.|||..
T Consensus        77 d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DP~Gn~iei~~  120 (121)
T cd07251          77 EVDAVLARAAAAGATIVKPPQDVFWGGYSGYFADPDGHLWEVAH  120 (121)
T ss_pred             HHHHHHHHHHhCCCEEecCCccCCCCceEEEEECCCCCEEEEee
Confidence            89999999999999986543    45789999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>TIGR03213 23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase

Probab=99.64  E-value=4.7e-15  Score=122.77  Aligned_cols=107  Identities=21%  Similarity=0.280  Sum_probs=80.1

Q ss_pred             eceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEEEE
Q 029285           73 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  152 (196)
Q Consensus        73 i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~p~~~~~~~hi~f~v  152 (196)
                      +.+++|++|.|+|+++|++||+++|||++..+.+  .   ...|+..++....+.....+.         .+..|++|.|
T Consensus         1 ~~~i~~v~l~V~Dl~~s~~FY~~~LGl~~~~~~~--~---~~~~~~~~~~~~~~~l~~~~~---------~~~~~~~f~V   66 (286)
T TIGR03213         1 VRGLGYLGIGVSDVDAWREFATEVLGMMVASEGE--N---DALYLRLDSRAHRIAVHPGES---------DDLAYAGWEV   66 (286)
T ss_pred             CceeeEEEEEeCCHHHHHHHHHhccCcccccCCC--C---ceEEEEcCCCceEEEEEECCc---------CCeeeEeeee
Confidence            4689999999999999999999999999765322  1   124667764323332222111         2457899999


Q ss_pred             CC---HHHHHHHHHHCCCeEEeeC-------CCceEEEEEcCCCCeEEEEe
Q 029285          153 RD---VSKLKMILDKAGISYTLSK-------SGRPAIFTRDPDANALEFTQ  193 (196)
Q Consensus       153 ~d---l~~~~~~l~~~G~~~~~~~-------~g~~~~~~~DPdG~~iEl~e  193 (196)
                      ++   ++++.++|+++|+++...+       .++..++|.|||||.|||+.
T Consensus        67 ~~~~~l~~~~~~L~~~Gv~~~~~~~~~~~~~~~~~~~~f~DPdGn~lEl~~  117 (286)
T TIGR03213        67 ADEAGLDQVKEKLEKAGVAVTVASAAEARERGVLGLIKFTDPGGNPLEIYY  117 (286)
T ss_pred             CCHHHHHHHHHHHHHcCCceEECCHHHhhhccceEEEEEECCCCCEEEEEE
Confidence            98   8889999999999987532       23578999999999999986

Members of this protein family all have activity as 2,3-dihydroxybiphenyl 1,2-dioxygenase, the third enzyme of a pathway for biphenyl degradation. Many of the extradiol ring-cleaving dioxygenases, to which these proteins belong, act on a range of related substrates. Note that some members of this family may be found operons for toluene or naphthalene degradation, where other activities of the same enzyme may be more significant; the trusted cutoff for this model is set relatively high to exclude most such instances.

>TIGR03213 23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase

Probab=99.63  E-value=9.7e-15  Score=120.89  Aligned_cols=112  Identities=15%  Similarity=0.262  Sum_probs=81.0

Q ss_pred             eceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCC--C-CCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEE
Q 029285           73 VVSVHHVGILCENLERSLEFYQNILGLEINEARPH--D-KLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTC  149 (196)
Q Consensus        73 i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~--~-~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~p~~~~~~~hi~  149 (196)
                      +.+++||+|.|+|+++|++||+++|||++..+...  + ...+..+|+..++....+.....+        ..++.+|++
T Consensus       140 ~~~l~Hv~l~v~Dle~s~~FY~~~LGf~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~l~~~~--------~~~~~~Hia  211 (286)
T TIGR03213       140 DQGLGHIVLRVPDVDAALAFYTEVLGFQLSDVIDLPAGPGVTVRPYFLHCNERHHSLAFAAGP--------SEKRLNHLM  211 (286)
T ss_pred             CccccEEEEEcCCHHHHHHHHHHccCCeEEEeEcccCCCCCcceEEEEEECCCcceEEEecCC--------CCCceEEEE
Confidence            56899999999999999999999999998764321  1 111245777776433222211111        124688999


Q ss_pred             EEECCHHH---HHHHHHHCCCeEEeeC-----CCceEEEEEcCCCCeEEEEe
Q 029285          150 IAIRDVSK---LKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQ  193 (196)
Q Consensus       150 f~v~dl~~---~~~~l~~~G~~~~~~~-----~g~~~~~~~DPdG~~iEl~e  193 (196)
                      |.|+|+++   ++++|+++|+ ....+     .+...+|++||+|+.||+..
T Consensus       212 f~v~d~~~v~~~~~~l~~~G~-~~~~~~r~~~~~~~~~y~~DP~G~~iE~~~  262 (286)
T TIGR03213       212 LEVDTLDDVGLALDRVDADGI-VASTLGRHTNDHMVSFYVATPSGWLVEYGW  262 (286)
T ss_pred             EEcCCHHHHHHHHHHHHHCCC-EEecCCcCCCCCeEEEEEECCCCcEEEeec
Confidence            99998777   7999999999 43322     34678999999999999975

Members of this protein family all have activity as 2,3-dihydroxybiphenyl 1,2-dioxygenase, the third enzyme of a pathway for biphenyl degradation. Many of the extradiol ring-cleaving dioxygenases, to which these proteins belong, act on a range of related substrates. Note that some members of this family may be found operons for toluene or naphthalene degradation, where other activities of the same enzyme may be more significant; the trusted cutoff for this model is set relatively high to exclude most such instances.

>TIGR03211 catechol_2_3 catechol 2,3 dioxygenase

Probab=99.60  E-value=1.5e-14  Score=120.49  Aligned_cols=105  Identities=21%  Similarity=0.262  Sum_probs=79.4

Q ss_pred             eceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeC----CeEEEEEecCCCCCCCCCCCCCCCceEE
Q 029285           73 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG----AEMIHLMELPNPDPLSGRPEHGGRDRHT  148 (196)
Q Consensus        73 i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g----~~~l~l~~~~~~~~~~~~p~~~~~~~hi  148 (196)
                      +++++|+.|.|+|++++++||+++|||++..+.+.      .+++...    ...+.+..  .         ...+..|+
T Consensus         2 i~~i~Hi~l~V~Dle~s~~FY~~~LG~~~~~~~~~------~~~~~~~~~~~~~~~~l~~--~---------~~~g~~hi   64 (303)
T TIGR03211         2 VMRLGHVELRVLDLEESLKHYTDVLGLEETGRDGQ------RVYLKAWDEWDHYSVILTE--A---------DTAGLDHM   64 (303)
T ss_pred             cceeeEEEEEeCCHHHHHHHHHHhcCCEEeeecCc------eEEEEeccccccceEeecc--C---------CCCceeEE
Confidence            56899999999999999999999999998764321      2444432    11222221  1         12357899


Q ss_pred             EEEEC---CHHHHHHHHHHCCCeEEeeC-----CCceEEEEEcCCCCeEEEEee
Q 029285          149 CIAIR---DVSKLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQV  194 (196)
Q Consensus       149 ~f~v~---dl~~~~~~l~~~G~~~~~~~-----~g~~~~~~~DPdG~~iEl~e~  194 (196)
                      +|.|+   ++++++++|+++|+++...+     ..++.+||+|||||.|||.+.
T Consensus        65 af~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~DPdG~~iEl~~~  118 (303)
T TIGR03211        65 AFKVESEADLERLVKRLEAYGVGTGWIPAGELPGVGRRVRFTLPSGHTMELYAE  118 (303)
T ss_pred             EEEeCCHHHHHHHHHHHHHcCCCeeeccCCCCCCcceEEEEECCCCCEEEEEEc
Confidence            99998   78899999999999986533     236789999999999999974

Members of this family all are enzymes active as catechol 2,3 dioxygenase (1.13.11.2), although some members have highly significant activity on catechol derivatives such as 3-methylcatechol, 3-chlorocatechol, and 4-chlorocatechol (see Mars, et al.). This enzyme is also called metapyrocatechase, as it performs a meta-cleavage (an extradiol ring cleavage), in contrast to the ortho-cleavage (intradiol ring cleavage)performed by catechol 1,2-dioxygenase (EC 1.13.11.1), also called pyrocatechase.

>KOG2944 consensus Glyoxalase [Carbohydrate transport and metabolism]

Probab=99.59  E-value=2.3e-14  Score=106.36  Aligned_cols=120  Identities=18%  Similarity=0.305  Sum_probs=78.5

Q ss_pred             ceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCeEEEEEecCCCCCCCC----CCCCCC-CceEE
Q 029285           74 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSG----RPEHGG-RDRHT  148 (196)
Q Consensus        74 ~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~----~p~~~~-~~~hi  148 (196)
                      .++.|+.|.+++.-+...||..+||++.....+.+... ...|+......++|...-.....+.    .+...+ +++||
T Consensus        41 tr~~gm~l~~~~~fke~~Fsl~fL~~~~~~~vP~~~~~-~~v~~~~~~~~~ELthn~Gtes~~~~~~~ngN~~prGfgHI  119 (170)
T KOG2944|consen   41 TRVNGMALLVPDDFKEAKFSLYFLGAEVSEDVPKPEHG-VSVFVFSRNAKLELTHNWGTESPPDQAYLNGNKEPRGFGHI  119 (170)
T ss_pred             hhhccceeechhhhhHhhhHHHhhcccccccCccCCCC-CceEEecccCceeeecCCCCCCCcchhhcCCCCCCCccceE
Confidence            34445555555555555555555555444333332222 2267777777788876544433331    122333 88999


Q ss_pred             EEEECCHHHHHHHHHHCCCeEEeeCC-C--ceEEEEEcCCCCeEEEEee
Q 029285          149 CIAIRDVSKLKMILDKAGISYTLSKS-G--RPAIFTRDPDANALEFTQV  194 (196)
Q Consensus       149 ~f~v~dl~~~~~~l~~~G~~~~~~~~-g--~~~~~~~DPdG~~iEl~e~  194 (196)
                      ||.|+|++.++++|+++|+++...++ |  ...+|+.||||+.|||...
T Consensus       120 ci~V~di~sac~~lkekGV~f~Kk~~dGk~K~iaF~~dpDgywiei~~~  168 (170)
T KOG2944|consen  120 CIEVDDINSACERLKEKGVRFKKKLKDGKMKPIAFLHDPDGYWIEIELE  168 (170)
T ss_pred             EEEeCCHHHHHHHHHHhCceeeecCCCccccceeEEECCCCCeEEEeec
Confidence            99999999999999999999876654 4  3679999999999999754

>TIGR02295 HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase

Probab=99.59  E-value=5.2e-14  Score=116.73  Aligned_cols=107  Identities=21%  Similarity=0.285  Sum_probs=80.2

Q ss_pred             eceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCC--eEEEEEecCCCCCCCCCCCCCCCceEEEE
Q 029285           73 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA--EMIHLMELPNPDPLSGRPEHGGRDRHTCI  150 (196)
Q Consensus        73 i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~--~~l~l~~~~~~~~~~~~p~~~~~~~hi~f  150 (196)
                      |.+++||.|.|+|++++++||+++|||++..+.+      ..+|+...+  ....+.....+         ..+..|++|
T Consensus         2 i~~i~hv~l~v~Dl~~s~~FY~~vLGl~~~~~~~------~~~~~~~~~~~~~~~l~l~~~~---------~~~~~hiaf   66 (294)
T TIGR02295         2 ILRTGHVELRVTDLDKSREFYVDLLGFRETESDK------EYIYLRGIEEFQHHSLVLTKAP---------SAALSYIGF   66 (294)
T ss_pred             CceeeEEEEEeCCHHHHHHHHHHccCCEEEEecC------CeEEEeccCcCCceEEEeeeCC---------CcCccEEEE
Confidence            5789999999999999999999999999876532      135554321  11222211111         135689999


Q ss_pred             EEC---CHHHHHHHHHHCCCeEEeeC--CCceEEEEEcCCCCeEEEEee
Q 029285          151 AIR---DVSKLKMILDKAGISYTLSK--SGRPAIFTRDPDANALEFTQV  194 (196)
Q Consensus       151 ~v~---dl~~~~~~l~~~G~~~~~~~--~g~~~~~~~DPdG~~iEl~e~  194 (196)
                      .|+   |+++++++|+++|+++...+  .+.+.+||+|||||.|||.+.
T Consensus        67 ~v~~~~dl~~~~~~l~~~Gv~v~~~~~~~~~~~~~~~DPdG~~iEl~~~  115 (294)
T TIGR02295        67 RVSKEEDLDKAADFFQKLGHPVRLVRDGGQPEALRVEDPFGYPIEFYFE  115 (294)
T ss_pred             EeCCHHHHHHHHHHHHhcCCcEEeecCCCCceEEEEECCCCCEEEEEEc
Confidence            997   78899999999999987543  346899999999999999873

The enzyme from Bacillus brevis contains manganese.

>PF13669 Glyoxalase_4: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; PDB: 3RMU_B 3ISQ_A 1JC5_D 1JC4_D 3HDP_A 2QH0_A 3GM5_A 3OA4_A 3CT8_A

Probab=99.58  E-value=1.2e-14  Score=103.63  Aligned_cols=94  Identities=26%  Similarity=0.393  Sum_probs=77.2

Q ss_pred             eEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCC--eEEEEEecCCCCCCCCCCCCCCCceEEEEEECC
Q 029285           77 HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA--EMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD  154 (196)
Q Consensus        77 ~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~--~~l~l~~~~~~~~~~~~p~~~~~~~hi~f~v~d  154 (196)
                      +||+|.|+|+++|++||+++||+........+....+.+|+..++  ..++|+++.......  ...+.+++||||.|+|
T Consensus         1 dHv~i~V~Dl~~a~~~~~~~lG~~~~~~~~~~~~~v~~~~~~~~~~~~~iELi~p~~~~~~~--~~~~~gi~Hia~~v~D   78 (109)
T PF13669_consen    1 DHVGIVVPDLDAAAAFYCDVLGFEPWERYRDEPQGVRVAFLYLGDGPVQIELIQPLDGDSPL--DRGGGGIHHIAFEVDD   78 (109)
T ss_dssp             EEEEEEES-HHHHHHHHHHCTTHEEEEEEEEGCTTEEEEEEEETTETEEEEEEEESSTTCHH--HHTSSEEEEEEEEESH
T ss_pred             CEEEEEcCCHHHHHHHHHHhhCCcEEEEEecCCCCEEEEEEEeCCCcEEEEEEEeCCCCccc--ccCCCCEEEEEEEeCC
Confidence            699999999999999999999999877666666667788998887  589999876654111  1267789999999999


Q ss_pred             HHHHHHHHHHCCCeEEee
Q 029285          155 VSKLKMILDKAGISYTLS  172 (196)
Q Consensus       155 l~~~~~~l~~~G~~~~~~  172 (196)
                      +++..++|+++|+++...
T Consensus        79 ~d~~~~~l~~~G~~~~~~   96 (109)
T PF13669_consen   79 LDAAIARLEAQGFRVLDE   96 (109)
T ss_dssp             HHHHHHHHHHTTECEEEC
T ss_pred             HHHHHHHHHHCCCEEccc
Confidence            999999999999998653

>PLN02300 lactoylglutathione lyase

Probab=99.58  E-value=5.4e-14  Score=116.67  Aligned_cols=119  Identities=20%  Similarity=0.234  Sum_probs=88.4

Q ss_pred             eceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCC----eEEEEEecCCCCCCCCCCCCCCCceEE
Q 029285           73 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA----EMIHLMELPNPDPLSGRPEHGGRDRHT  148 (196)
Q Consensus        73 i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~----~~l~l~~~~~~~~~~~~p~~~~~~~hi  148 (196)
                      ..++.|+.|.|+|++++.+||+++|||++......+...+..+++..++    ..+++......    ..+..+++..|+
T Consensus       152 ~~~~~~~~l~~~d~~~a~~Fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~----~~~~~g~~~~~i  227 (286)
T PLN02300        152 PEPLCQVMLRVGDLDRSIKFYEKAFGMKLLRKRDNPEYKYTIAMMGYGPEDKTTVLELTYNYGV----TEYTKGNAYAQI  227 (286)
T ss_pred             CCcceeEEEEeCCHHHHHHHHHhccCCEEEeeecccccceEEEEEecCCCCCccEEEEeecCCC----CccccCCceeEE
Confidence            3578899999999999999999999999986544334445666665432    23444321111    112335677899


Q ss_pred             EEEECCHHHHHHHHHHCCCeEEeeC---CC--ceEEEEEcCCCCeEEEEeec
Q 029285          149 CIAIRDVSKLKMILDKAGISYTLSK---SG--RPAIFTRDPDANALEFTQVD  195 (196)
Q Consensus       149 ~f~v~dl~~~~~~l~~~G~~~~~~~---~g--~~~~~~~DPdG~~iEl~e~~  195 (196)
                      +|.|+|+++++++++++|+++..++   ++  ++.++++||||+.++|++..
T Consensus       228 ~~~v~di~~~~~~~~~~G~~v~~~p~~~p~~~~~~~~~~DPdG~~i~~~~~~  279 (286)
T PLN02300        228 AIGTDDVYKTAEAIKLVGGKITREPGPLPGINTKITACLDPDGWKTVFVDNI  279 (286)
T ss_pred             EEecCCHHHHHHHHHHcCCeEecCCccCCCCceEEEEEECCCCCEEEEEccc
Confidence            9999999999999999999987643   23  47899999999999999864

>COG3565 Predicted dioxygenase of extradiol dioxygenase family [General function prediction only]

Probab=99.46  E-value=1e-12  Score=92.63  Aligned_cols=111  Identities=25%  Similarity=0.442  Sum_probs=77.4

Q ss_pred             eeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeC--CeEEEEEecCCCCCCCCCCC--CCCCceEEEEE
Q 029285           76 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG--AEMIHLMELPNPDPLSGRPE--HGGRDRHTCIA  151 (196)
Q Consensus        76 l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g--~~~l~l~~~~~~~~~~~~p~--~~~~~~hi~f~  151 (196)
                      +-|++|.|+|+++++.||.++||.+.....+        .|+.++  |.++.....+.++.....+.  ++--..|++..
T Consensus         5 ~FHLA~pV~Dl~~tr~FYgevlG~~~GRstd--------~wvdfDfyGHQ~v~Hl~~q~~~~~~g~V~~~~v~~pHfGvV   76 (138)
T COG3565           5 PFHLAIPVNDLDETRRFYGEVLGCKEGRSTD--------TWVDFDFYGHQVVAHLTPQPDSQGSGKVDGHGVPPPHFGVV   76 (138)
T ss_pred             ceEEeeeccccHHHHhhhhhhcccccccccc--------eEEEeeecccEEEEEecCCcccccCcccCCCCCCCccceEE
Confidence            5699999999999999999999999765432        566654  44444433333322211122  22233466654


Q ss_pred             --ECCHHHHHHHHHHCCCeEEeeC--------CCceEEEEEcCCCCeEEEEee
Q 029285          152 --IRDVSKLKMILDKAGISYTLSK--------SGRPAIFTRDPDANALEFTQV  194 (196)
Q Consensus       152 --v~dl~~~~~~l~~~G~~~~~~~--------~g~~~~~~~DPdG~~iEl~e~  194 (196)
                        ++|.-++.++|+++|+.+..++        ...+.+|+.||.||.+|+...
T Consensus        77 l~~edW~alaerlea~gi~~~i~P~vRF~Ge~gEq~TlFl~DP~gN~lEfK~f  129 (138)
T COG3565          77 LPVEDWFALAERLEAAGIPFHIPPKVRFKGEPGEQRTLFLFDPSGNALEFKGF  129 (138)
T ss_pred             EEHHHHHHHHHHHHHcCCCcccCceEEecCCccceEEEEEECCCCCeeeeecc
Confidence              5588899999999999875543        347899999999999999753

>COG3324 Predicted enzyme related to lactoylglutathione lyase [General function prediction only]

Probab=99.42  E-value=7.7e-12  Score=91.13  Aligned_cols=113  Identities=19%  Similarity=0.214  Sum_probs=80.4

Q ss_pred             ceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCC-e-EEEEEecCCCCCCCCCCCCCCCceEEEEE
Q 029285           74 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA-E-MIHLMELPNPDPLSGRPEHGGRDRHTCIA  151 (196)
Q Consensus        74 ~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~-~-~l~l~~~~~~~~~~~~p~~~~~~~hi~f~  151 (196)
                      ..+.|..|++.|++++++||.++|||+.....+..+  ...+.+..++ . .-.+...+..     .|.  +..-++.|.
T Consensus         8 ~~i~w~Ei~~~D~~ra~~FY~~vFgW~~~~~~~~~~--~~y~~f~~~~~~~gG~l~~~~~~-----~p~--~~~~~iy~~   78 (127)
T COG3324           8 GTIVWFELPVSDLERAKAFYEKVFGWTFEDYFDMGE--MRYAVFPADGAGAGGGLMARPGS-----PPG--GGGWVIYFA   78 (127)
T ss_pred             CccEEEeeecCCHHHHHHHHHHhhCceecccccCCC--ceEEEEECCCccccceeccCCcC-----CCC--CCCEEEEEe
Confidence            457899999999999999999999999876433222  2333333332 1 1111111111     111  234578899


Q ss_pred             ECCHHHHHHHHHHCCCeEEeeC----CCceEEEEEcCCCCeEEEEeec
Q 029285          152 IRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQVD  195 (196)
Q Consensus       152 v~dl~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~iEl~e~~  195 (196)
                      |+|+++..++..+.|..+..++    .+++.+.+.||+||+|.|+++.
T Consensus        79 v~did~~l~rv~~~GG~V~~p~~~~p~~G~~a~~~Dp~Gn~~~l~s~~  126 (127)
T COG3324          79 VDDIDATLERVVAAGGKVLRPKTEFPGGGRIAHFVDPEGNRFGLWSPA  126 (127)
T ss_pred             cCChHHHHHHHHhcCCeEEecccccCCceEEEEEECCCCCEEEEeecC
Confidence            9999999999999999987653    4789999999999999999865

>COG2514 Predicted ring-cleavage extradiol dioxygenase [General function prediction only]

Probab=99.41  E-value=5e-12  Score=101.86  Aligned_cols=112  Identities=25%  Similarity=0.397  Sum_probs=87.0

Q ss_pred             ceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCe-EEEEEecCCCCCCCCCCCCCCCceEEEEEE
Q 029285           74 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE-MIHLMELPNPDPLSGRPEHGGRDRHTCIAI  152 (196)
Q Consensus        74 ~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~-~l~l~~~~~~~~~~~~p~~~~~~~hi~f~v  152 (196)
                      +.++.+.|.|+|++++..||+++||+++..+.+      ..+-+..++. -+.|.+.++...   .+....+..|++|.+
T Consensus         9 ~~v~~v~L~vrdL~~~~~FY~~ilGL~v~~~~~------~~v~L~vgg~~LL~L~q~~~a~~---~~~~~aGLyH~AfLl   79 (265)
T COG2514           9 TFVGAVTLNVRDLDSMTSFYQEILGLQVLEETD------GSVTLGVGGTPLLTLEQFPDARR---PPPRAAGLYHTAFLL   79 (265)
T ss_pred             cEEEEEEEEeccHHHHHHHHHHhhCCeeeeccC------ceEEEeeCCEEEEEEEeCCCCCC---CCccccceeeeeeec
Confidence            578999999999999999999999999998654      2345777776 455555444432   223456888999999


Q ss_pred             C---CHHHHHHHHHHCCCeEEeeCC--CceEEEEEcCCCCeEEEEee
Q 029285          153 R---DVSKLKMILDKAGISYTLSKS--GRPAIFTRDPDANALEFTQV  194 (196)
Q Consensus       153 ~---dl~~~~~~l~~~G~~~~~~~~--g~~~~~~~DPdG~~iEl~e~  194 (196)
                      +   |+..+..++.+.|+.+....+  -..++|+.|||||-||++..
T Consensus        80 P~r~~L~~~l~hl~~~~~~l~Ga~DH~vSEAlYl~DPEGNGIEiYaD  126 (265)
T COG2514          80 PTREDLARVLNHLAEEGIPLVGASDHLVSEALYLEDPEGNGIEIYAD  126 (265)
T ss_pred             CCHHHHHHHHHHHHhcCCcccccCcchhheeeeecCCCCCeEEEEec
Confidence            9   677778899999998864332  36789999999999999875

>COG3607 Predicted lactoylglutathione lyase [General function prediction only]

Probab=99.41  E-value=3.1e-12  Score=91.51  Aligned_cols=118  Identities=20%  Similarity=0.253  Sum_probs=85.8

Q ss_pred             eeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCC---CCCCCCceEEEEE
Q 029285           75 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGR---PEHGGRDRHTCIA  151 (196)
Q Consensus        75 ~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~---p~~~~~~~hi~f~  151 (196)
                      .+-.|.|.|+|+++|.+||+. |||+......++.   ..+++..++..+.|.+......-...   ......-..+|+.
T Consensus         3 ~mIFvNLPVkDL~~S~~Fy~a-lGfk~Npq~sde~---a~~mi~~~ni~vMLL~~~~fq~F~~~~i~dt~~s~evli~ls   78 (133)
T COG3607           3 QMIFVNLPVKDLEASKAFYTA-LGFKFNPQFSDED---AACMIISDNIFVMLLEEARFQTFTKRQIADTTKSREVLISLS   78 (133)
T ss_pred             eEEEEecchhhHHHHHHHHHH-hCcccCCCccccc---ceeEEEeccEEEEEeccHHhhhhcccccccccCCceEEEEec
Confidence            456799999999999999998 9999998655433   34566667777777765433211111   1123344578888


Q ss_pred             EC---CHHHHHHHHHHCCCeEEeeC--CC-ceEEEEEcCCCCeEEEEeecC
Q 029285          152 IR---DVSKLKMILDKAGISYTLSK--SG-RPAIFTRDPDANALEFTQVDG  196 (196)
Q Consensus       152 v~---dl~~~~~~l~~~G~~~~~~~--~g-~~~~~~~DPdG~~iEl~e~~~  196 (196)
                      +.   +++++.++..+.|.++..++  .| .+...|.|||||.||+...+|
T Consensus        79 ~~s~eevd~~v~ka~eaGGk~~~~~~d~gfMYg~~fqDpDGh~wE~l~m~~  129 (133)
T COG3607          79 AGSREEVDELVDKALEAGGKPANEPQDEGFMYGRSFQDPDGHVWEFLWMDP  129 (133)
T ss_pred             cCcHHHHHHHHHHHHHcCCCCCCCccccccccceeeeCCCCCeEEEEEeCH
Confidence            87   77888999999999885544  22 577889999999999998875

>cd07250 HPPD_C_like C-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HppD) and hydroxymandelate Synthase (HmaS)

Probab=99.33  E-value=8.1e-12  Score=97.94  Aligned_cols=99  Identities=18%  Similarity=0.158  Sum_probs=72.1

Q ss_pred             ceeeEEEEEcC--CHHHHHHHHHhccCCEEeeecCCCC--CCceeEEEEeC--CeEEEEEecCCCCCCC--CC---CCCC
Q 029285           74 VSVHHVGILCE--NLERSLEFYQNILGLEINEARPHDK--LPYRGAWLWVG--AEMIHLMELPNPDPLS--GR---PEHG  142 (196)
Q Consensus        74 ~~l~hv~l~v~--Dl~~a~~FY~~vLG~~~~~~~~~~~--~~~~~~~l~~g--~~~l~l~~~~~~~~~~--~~---p~~~  142 (196)
                      .+++||++.|+  |++++++||+++|||+.....+.++  ...+...+..+  +..+.|.+...+....  ..   ...+
T Consensus         2 ~~iDHv~i~V~~~dl~~a~~fY~~~LGf~~~~~~~~~~~~~~~~s~~l~~~~g~i~l~L~~~~~~~~~s~~~~fl~~~~G   81 (191)
T cd07250           2 TRIDHVVGNVPDGEMDSWVDFYRKVLGFHRFWSFDIEDPYSGLRSRVLASPDGKIRIPLNEPASGKRKSQIQEFLEYYGG   81 (191)
T ss_pred             ceeeEEEeecChhHHHHHHHHHHHhhCCceeeEEccCcCcccEEEEEEECCCCcEEEEEecCCCCCCccHHHHHHHHhCC
Confidence            57899999999  9999999999999999887554332  22333445543  3567777654421111  10   1136


Q ss_pred             CCceEEEEEECCHHHHHHHHHHCCCeEEee
Q 029285          143 GRDRHTCIAIRDVSKLKMILDKAGISYTLS  172 (196)
Q Consensus       143 ~~~~hi~f~v~dl~~~~~~l~~~G~~~~~~  172 (196)
                      .|.+||||.|+|+++++++|+++|+++...
T Consensus        82 ~Gv~HIAf~vdDI~~~~~~L~~~Gv~~l~~  111 (191)
T cd07250          82 AGVQHIALATDDIFATVAALRARGVEFLPI  111 (191)
T ss_pred             CceeEEEEECCCHHHHHHHHHHcCCeeccC
Confidence            788999999999999999999999988544

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of 4-hydroxyphenylpyruvate to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two,

>cd06588 PhnB_like Escherichia coli PhnB and similar proteins; the E

Probab=99.27  E-value=3.1e-10  Score=83.05  Aligned_cols=108  Identities=18%  Similarity=0.135  Sum_probs=77.2

Q ss_pred             EEEEc-CCHHHHHHHHHhccCCEEeeecCCCC----------CCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceE
Q 029285           79 VGILC-ENLERSLEFYQNILGLEINEARPHDK----------LPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRH  147 (196)
Q Consensus        79 v~l~v-~Dl~~a~~FY~~vLG~~~~~~~~~~~----------~~~~~~~l~~g~~~l~l~~~~~~~~~~~~p~~~~~~~h  147 (196)
                      ..|.+ .|.++|++||+++||+++......+.          .....+-+..++..+.+.........     .++...+
T Consensus         3 p~L~~~~~~~eAi~FY~~~fg~~~~~~~~~~~~~~~~~~~~~~~i~ha~l~i~g~~l~~~d~~~~~~~-----~~~~~~~   77 (128)
T cd06588           3 PYLWFNGNAEEALEFYQSVFGGEITSLTRYGEGPPPDPEEPEGKVMHAELTIGGQRLMASDGGPGFPF-----TFGNGIS   77 (128)
T ss_pred             eEEeeCCCHHHHHHHHHHHhCCEeEEEEEcCCCCCCCCCCcCCcEEEEEEEECCEEEEEEcCCCCCCC-----CCCCCEE
Confidence            34667 89999999999999999997654221          22345678888888877764332211     1233458


Q ss_pred             EEEEECC---HHHHHHHHHHCCCeEEee----CCCceEEEEEcCCCCeEEEE
Q 029285          148 TCIAIRD---VSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFT  192 (196)
Q Consensus       148 i~f~v~d---l~~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdG~~iEl~  192 (196)
                      +++.|++   +++++++|.+.| .+..+    ++|.+...++||+|+.|+|.
T Consensus        78 l~i~~~~~e~v~~~~~~l~~~g-~~~~~~~~~~~g~~~~~v~Dp~G~~W~i~  128 (128)
T cd06588          78 LSVECDSEEEADRLFEALSEGG-TVLMPLQKTFWSPLFGWVTDRFGVSWQIN  128 (128)
T ss_pred             EEEECCCHHHHHHHHHHHhcCC-eEeccchhcCcccccEEEECCCCCEEEeC
Confidence            9999886   667789988777 55433    46778999999999999973

coli phnB gene is found next to an operon involved in the cleavage of carbon-phosphorus bonds in unactivated alkylphosphonates. The Escherichia coli phnB gene is found next to an operon of fourteen genes (phnC-to-phnP) related to the cleavage of carbon-phosphorus (C-P) bonds in unactivated alkylphosphonates, supporting bacterial growth on alkylphosphonates as the sole phosphorus source. It was originally considered part of that operon. PhnB appears to play no direct catalytic role in the usage of alkylphosphonate. Although many of the proteins in this family have been annotated as 3-demethylubiquinone-9 3-methyltransferase enzymes by automatic annotation programs, the experimental evidence for this assignment is lacking. In Escherichia coli, the gene coding 3-demethylubiquinone-9 3-methyltransferase enzyme is ubiG, which belongs to the AdoMet-MTase protein family. PhnB-like proteins adopt a structural fold similar to

>KOG2943 consensus Predicted glyoxalase [Carbohydrate transport and metabolism]

Probab=99.25  E-value=2.8e-11  Score=95.67  Aligned_cols=116  Identities=18%  Similarity=0.210  Sum_probs=87.7

Q ss_pred             ceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCC-----------CCceeEEEEeCCeEEEEEecCCCCCCCCCCCCC
Q 029285           74 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDK-----------LPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHG  142 (196)
Q Consensus        74 ~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~-----------~~~~~~~l~~g~~~l~l~~~~~~~~~~~~p~~~  142 (196)
                      .++.|+.+.|.|.++++.||+++|||++....+.++           .....+|+..|...-|++.--...-....++.|
T Consensus        16 ~r~LH~VfkVgdr~kti~Fyt~vlgMkvLRheef~egc~aacngpyd~kwSktmvGyGpEdshFViELTYNYgV~~YelG   95 (299)
T KOG2943|consen   16 RRALHYVFKVGDRAKTIDFYTEVLGMKVLRHEEFEEGCEAACNGPYDGKWSKTMVGYGPEDSHFVIELTYNYGVSKYELG   95 (299)
T ss_pred             hheeeEeEeecchHHHHHHHHHhhcceeeehhhhhhhhhhhcCCCcccchhhhheecCCCcccEEEEEEeccCccceecc
Confidence            578899999999999999999999999998666555           334456777776554554222222223456788


Q ss_pred             CCceEEEEEECCHHHHHHHHHHCCCeEEeeCCCceEEEEEcCCCCeEEEEe
Q 029285          143 GRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQ  193 (196)
Q Consensus       143 ~~~~hi~f~v~dl~~~~~~l~~~G~~~~~~~~g~~~~~~~DPdG~~iEl~e  193 (196)
                      +++.||.+.++|+-...+.+...|.    ...|.-.+++.||||+.+++.+
T Consensus        96 ndfg~i~I~s~dv~~~ve~v~~p~~----~~~g~~~~~v~dPdGykF~l~~  142 (299)
T KOG2943|consen   96 NDFGGITIASDDVFSKVEKVNAPGG----KGSGCGIAFVKDPDGYKFYLID  142 (299)
T ss_pred             CCcccEEEeHHHHHHHHHHhcCcCC----cccceEEEEEECCCCcEEEEec
Confidence            8999999999999888888887664    2234466889999999999986

>TIGR01263 4HPPD 4-hydroxyphenylpyruvate dioxygenase

Probab=99.21  E-value=2.1e-10  Score=98.01  Aligned_cols=105  Identities=17%  Similarity=0.195  Sum_probs=74.3

Q ss_pred             CCceeceeeEEEEEcC--CHHHHHHHHHhccCCEEeeecCCCC--CCceeEEEEe--CCeEEEEEecCCCCCCC--C---
Q 029285           69 IDYGVVSVHHVGILCE--NLERSLEFYQNILGLEINEARPHDK--LPYRGAWLWV--GAEMIHLMELPNPDPLS--G---  137 (196)
Q Consensus        69 ~~~~i~~l~hv~l~v~--Dl~~a~~FY~~vLG~~~~~~~~~~~--~~~~~~~l~~--g~~~l~l~~~~~~~~~~--~---  137 (196)
                      .++.+.+++||++.|.  |++++++||+++|||+.....+...  .......+..  ++..++|.++.......  .   
T Consensus       152 ~~~~~~~iDHv~i~V~~~dl~~~~~fY~~~lGf~~~~~~~~~~~~~~~~s~~~~~~~g~~~i~L~ep~~~~~~s~i~~fl  231 (353)
T TIGR01263       152 PGVGLIAIDHLVGNVYRGQMEPWAEFYEKIFGFREIRSFDIKTEYSALNSIVMASPDGKVKIPLNEPASGKDKSQIEEFL  231 (353)
T ss_pred             CCCCeEEeeeeEcccCCccHHHHHHHHHHHhCCceeeEEEeccCCccEEEEEEECCCCcEEEEEeccCCCCCCCHHHHHH
Confidence            4567889999999999  9999999999999999876543211  1112222332  34678887653221111  1   


Q ss_pred             CCCCCCCceEEEEEECCHHHHHHHHHHCCCeEEeeC
Q 029285          138 RPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK  173 (196)
Q Consensus       138 ~p~~~~~~~hi~f~v~dl~~~~~~l~~~G~~~~~~~  173 (196)
                      ....+.|++||||.|+|+++++++|+++|+++...|
T Consensus       232 ~~~~g~Gv~HiAf~vdDi~~~~~~l~~~Gv~~l~~P  267 (353)
T TIGR01263       232 EFYNGAGVQHIALNTDDIVRTVRALRARGVEFLDTP  267 (353)
T ss_pred             HHcCCCCccEEEEEcCCHHHHHHHHHHcCCccCcCC
Confidence            112367899999999999999999999999886543

This protein oxidizes 4-hydroxyphenylpyruvate, a tyrosine and phenylalanine catabolite, to homogentisate. Homogentisate can undergo a further non-enzymatic oxidation and polymerization into brown pigments that protect some bacterial species from light. A similar process occurs spontaneously in blood and is hemolytic (see PubMed:8000039). In some bacterial species, this enzyme has been studied as a hemolysin.

>COG0346 GloA Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]

Probab=99.19  E-value=5.9e-11  Score=84.69  Aligned_cols=120  Identities=22%  Similarity=0.311  Sum_probs=72.5

Q ss_pred             ceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCce-eEEEEeCC--eEEEEEecC-------CCC-CCCCCCCCC
Q 029285           74 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYR-GAWLWVGA--EMIHLMELP-------NPD-PLSGRPEHG  142 (196)
Q Consensus        74 ~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~-~~~l~~g~--~~l~l~~~~-------~~~-~~~~~p~~~  142 (196)
                      ++++||+|.|+|+++|++||+++||+++............ ...+....  .........       ... .........
T Consensus         1 ~~l~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (138)
T COG0346           1 MGIHHVTLAVPDLEASIDFYTDVLGLRLVKDTVNEADDGGGYHLLFLDGDGGPGELLAFFGFEGRAGTGFVGDVALGVPG   80 (138)
T ss_pred             CceEEEEEeeCCHhHhHHHHHhhcCCeeeeecccccCCceEEEEEeccCCCCcccceeecccccccccccccceEEeecC
Confidence            3689999999999999999999999999986654332210 11111111  011111100       000 000000111


Q ss_pred             --CCceEEEEEECC---HHHHHHHHHHCCCeEEeeC--CCceEEEEEcCCCCeEEEEe
Q 029285          143 --GRDRHTCIAIRD---VSKLKMILDKAGISYTLSK--SGRPAIFTRDPDANALEFTQ  193 (196)
Q Consensus       143 --~~~~hi~f~v~d---l~~~~~~l~~~G~~~~~~~--~g~~~~~~~DPdG~~iEl~e  193 (196)
                        .+..|+++.+++   ...........|..+....  ..+..+|++||||+.+||.+
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~dp~g~~~e~~~  138 (138)
T COG0346          81 GDLGLGHLAFEVDDEAFGDAALAFLDPDGVRIELGEPGRGGVHVYFRDPDGILIELAT  138 (138)
T ss_pred             chhccCceeEecccccccceEEEeeCCCCCEEEeecCCCcceEEEEECCCCcEEEeeC
Confidence              246799999998   5566667777787765432  12238999999999999974

>COG2764 PhnB Uncharacterized protein conserved in bacteria [Function unknown]

Probab=99.16  E-value=2.6e-09  Score=79.04  Aligned_cols=113  Identities=19%  Similarity=0.164  Sum_probs=85.8

Q ss_pred             EEEcC-CHHHHHHHHHhccCCEEeeecCCCC----------CCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEE
Q 029285           80 GILCE-NLERSLEFYQNILGLEINEARPHDK----------LPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHT  148 (196)
Q Consensus        80 ~l~v~-Dl~~a~~FY~~vLG~~~~~~~~~~~----------~~~~~~~l~~g~~~l~l~~~~~~~~~~~~p~~~~~~~hi  148 (196)
                      -|.++ |.++|++||+++||.++..+.+..+          ...-++-|.++++.+.+........   ....++....|
T Consensus         5 Yl~f~gn~~~Al~fY~~vFgae~~~~~~~~d~~~~~~~~~~~~i~HA~l~i~g~~im~sd~~~~~~---~~~~~~~s~~l   81 (136)
T COG2764           5 YLFFNGNAREALAFYKEVFGAEELKRVPFGDMPSSAGEPPGGRIMHAELRIGGSTIMLSDAFPDMG---ATEGGGTSLSL   81 (136)
T ss_pred             EEEECCCHHHHHHHHHHHhCceEEEEEEcCccCccccccccCceEEEEEEECCEEEEEecCCCccC---cccCCCeeEEE
Confidence            46778 9999999999999999998777666          3455677888888887765432221   11112223467


Q ss_pred             EEEECCHHHHHHHHHHCCCeEEee----CCCceEEEEEcCCCCeEEEEeec
Q 029285          149 CIAIRDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVD  195 (196)
Q Consensus       149 ~f~v~dl~~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdG~~iEl~e~~  195 (196)
                      .+.+.|++.+++++.+.|++++.+    .+|.+...++||.|+.|.|....
T Consensus        82 ~~~~~d~da~f~~a~~aGa~v~mpl~~~fwG~r~G~v~D~fGv~W~l~~~~  132 (136)
T COG2764          82 DLYVEDVDAVFERAAAAGATVVMPLEDTFWGDRYGQVTDPFGVVWMLNTPV  132 (136)
T ss_pred             EEEehHHHHHHHHHHhcCCeEEecchhcCcccceEEEECCCCCEEEEecCc
Confidence            777889999999999999888665    37889999999999999998653

>TIGR01263 4HPPD 4-hydroxyphenylpyruvate dioxygenase

Probab=99.12  E-value=2.1e-09  Score=91.78  Aligned_cols=97  Identities=12%  Similarity=0.130  Sum_probs=72.5

Q ss_pred             eeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCeEEEEEecCCCCCCCC--CCCCCCCceEEEEEE
Q 029285           75 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSG--RPEHGGRDRHTCIAI  152 (196)
Q Consensus        75 ~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~--~p~~~~~~~hi~f~v  152 (196)
                      +++||.|+|+|++++++||.+.|||+......... ....+.+..|+..++|.....+.....  ...++.+.+|+||.|
T Consensus         2 ~i~hi~~~V~D~~~a~~~y~~~LGf~~~~~~~~~~-~~~~~~~~~G~~~l~L~~~~~~~s~~~~~~~~hg~gv~~iaf~V   80 (353)
T TIGR01263         2 GFDFVEFYVGDAKQAAYYYFTRFGFEKVAKETGHR-EKASHVLRQGQINFVLTAPYSSDSPAADFAAKHGDGVKDVAFRV   80 (353)
T ss_pred             ceEEEEEEeCCHHHHHHHHHHhcCCcEEEEeecCC-ceeEEEEEeCCEEEEEecCCCCCchHHHHHHhCCCceEEEEEEE
Confidence            68999999999999999999999999987521111 112334566777888886554332111  123677889999999


Q ss_pred             CCHHHHHHHHHHCCCeEEee
Q 029285          153 RDVSKLKMILDKAGISYTLS  172 (196)
Q Consensus       153 ~dl~~~~~~l~~~G~~~~~~  172 (196)
                      +|++++++++.++|+.+..+
T Consensus        81 ~Dv~~a~~~l~~~Ga~~v~~  100 (353)
T TIGR01263        81 DDAAAAFEAAVERGAEPVQA  100 (353)
T ss_pred             CCHHHHHHHHHHCCCEeccC
Confidence            99999999999999988543

This protein oxidizes 4-hydroxyphenylpyruvate, a tyrosine and phenylalanine catabolite, to homogentisate. Homogentisate can undergo a further non-enzymatic oxidation and polymerization into brown pigments that protect some bacterial species from light. A similar process occurs spontaneously in blood and is hemolytic (see PubMed:8000039). In some bacterial species, this enzyme has been studied as a hemolysin.

>PLN02875 4-hydroxyphenylpyruvate dioxygenase

Probab=98.92  E-value=9.9e-09  Score=88.46  Aligned_cols=101  Identities=13%  Similarity=0.118  Sum_probs=75.1

Q ss_pred             ceeceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCC-----CceeEEEEeCC--eEEEEEecCCC---CCCCCC--
Q 029285           71 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKL-----PYRGAWLWVGA--EMIHLMELPNP---DPLSGR--  138 (196)
Q Consensus        71 ~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~-----~~~~~~l~~g~--~~l~l~~~~~~---~~~~~~--  138 (196)
                      ..+.+++||++.|++++.++.||+++|||+.....+.++.     ..+...+..++  ..+.|.++...   ......  
T Consensus       176 ~gl~~IDHi~iaV~~ld~a~~fY~~vlGf~~~~~~d~~~i~~~~sgl~S~vl~sp~g~v~ipLnEP~~~~~~~SqI~eFL  255 (398)
T PLN02875        176 YGLRRLDHAVGNVPNLLPAVNYIAGFTGFHEFAEFTAEDVGTVDSGLNSMVLASNNEMVLLPLNEPTFGTKRKSQIQTYL  255 (398)
T ss_pred             CCcceeCcceechhhHHHHHHHHHHhcCCeeeeeeccccccccccceEEEEEEcCCCcEEEEeccCCCCCCCcChHHHHH
Confidence            3467999999999999999999999999998864443222     23455566543  57888776532   121111  


Q ss_pred             -CCCCCCceEEEEEECCHHHHHHHHHHC----CCeEEe
Q 029285          139 -PEHGGRDRHTCIAIRDVSKLKMILDKA----GISYTL  171 (196)
Q Consensus       139 -p~~~~~~~hi~f~v~dl~~~~~~l~~~----G~~~~~  171 (196)
                       ...|+|++||||.++||.++.++|+++    |+++..
T Consensus       256 ~~~~G~GIQHIAl~tdDI~~av~~Lra~~~~~Gv~fL~  293 (398)
T PLN02875        256 EHNEGPGLQHLALKSDDIFGTLREMRARSHIGGFEFMP  293 (398)
T ss_pred             HhcCCCCeeEEEeecCCHHHHHHHHHhccccCCeecCC
Confidence             224689999999999999999999999    998865

>PRK01037 trmD tRNA (guanine-N(1)-)-methyltransferase/unknown domain fusion protein; Reviewed

Probab=98.80  E-value=3.8e-08  Score=82.68  Aligned_cols=103  Identities=19%  Similarity=0.235  Sum_probs=69.3

Q ss_pred             eeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCeEEEEE-ecCCCCCCCCCCCCCCCceEEEEEEC
Q 029285           75 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLM-ELPNPDPLSGRPEHGGRDRHTCIAIR  153 (196)
Q Consensus        75 ~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~l~l~-~~~~~~~~~~~p~~~~~~~hi~f~v~  153 (196)
                      ..-||+|.|+|+++|++||+++|++..   ..++..    +-+  ++..+.+. ..++.        ....-.-+|+.++
T Consensus       247 ~~IfVNLpV~DL~rS~~FYt~LF~~n~---Fsde~a----~cm--~dtI~vMllt~~D~--------~~~~evLl~Ls~~  309 (357)
T PRK01037        247 KTFSVVLEVQDLRRAKKFYSKMFGLEC---WDGDKL----FLL--GKTSLYLQQTKAEK--------KNRGTTTLSLELE  309 (357)
T ss_pred             ceEEEEeeeCCHHHHHHHHHHHhCCCC---CCCCcc----ccc--cCcEEEEEecCCCC--------CCcceEEEEeccC
Confidence            556999999999999999999877773   222221    112  44433333 22211        1123456999988


Q ss_pred             ---CHHHHHHHHHHCCCeEEeeC-CCceEEEEEcCCCCeEEEEee
Q 029285          154 ---DVSKLKMILDKAGISYTLSK-SGRPAIFTRDPDANALEFTQV  194 (196)
Q Consensus       154 ---dl~~~~~~l~~~G~~~~~~~-~g~~~~~~~DPdG~~iEl~e~  194 (196)
                         ++++++++..++|.....++ +.+..--|.|||||.||++..
T Consensus       310 Sre~VD~lv~~A~aaGG~~~~~~~D~Gf~rsf~D~DGH~WEi~~~  354 (357)
T PRK01037        310 CEHDFVRFLRRWEMLGGELGEQADGHFPLRLVFDLDGHIWVVSCV  354 (357)
T ss_pred             CHHHHHHHHHHHHHcCCCCCCCcccccCcceeECCCCCEEEEEEE
Confidence               77788999999998654333 223377899999999999864

>PF13468 Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B

Probab=98.71  E-value=4.9e-08  Score=75.26  Aligned_cols=93  Identities=19%  Similarity=0.307  Sum_probs=59.5

Q ss_pred             eeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCeEEEEEecCCCCCCC--CCC------CCCCCceE
Q 029285           76 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLS--GRP------EHGGRDRH  147 (196)
Q Consensus        76 l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~--~~p------~~~~~~~h  147 (196)
                      ++|+.+.|+|++++.++|++.|||.+.........+..++.+.+++..|||+.........  ...      ..+.+..+
T Consensus         1 lDH~v~~v~dl~~a~~~~~~~lGf~~~~gg~h~~~GT~N~li~f~~~YlEli~i~~~~~~~~~~~~~~~~~~~~~~g~~~   80 (175)
T PF13468_consen    1 LDHLVIAVRDLDAAVERFEQRLGFTVTPGGEHPGWGTANALIPFGDGYLELIAIDPEAPAPDRGRWFGLDRLAGGEGLYG   80 (175)
T ss_dssp             EEEEEEE-TTGGG----GGGS--S--EEEEE-TTT-EEEEEEE-SSSEEEEEEES-HHHSTGGGT-TTTHHHHT--EEEE
T ss_pred             CCEEEEEcCCHHHHHHhhhhcceEeecCCCcCCCCccEEEEEeeCCceEEEEEeCCcccccccccceechhhcCCCCeEE
Confidence            6899999999999999998889999998777766677778788887799999864332211  110      14678889


Q ss_pred             EEEEECCHHHHHHHHHHCCCe
Q 029285          148 TCIAIRDVSKLKMILDKAGIS  168 (196)
Q Consensus       148 i~f~v~dl~~~~~~l~~~G~~  168 (196)
                      +|+.++|+++..++|++.|+.
T Consensus        81 ~~l~t~d~~~~~~~l~~~G~~  101 (175)
T PF13468_consen   81 WALRTDDIEAVAARLRAAGLD  101 (175)
T ss_dssp             EEEE-S-HHHHHHHHHTTT-E
T ss_pred             EEEecCCHHHHHHHHHhcCCC
Confidence            999999999999999999975

>KOG2943 consensus Predicted glyoxalase [Carbohydrate transport and metabolism]

Probab=98.67  E-value=1.2e-07  Score=75.38  Aligned_cols=110  Identities=22%  Similarity=0.308  Sum_probs=75.8

Q ss_pred             eeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCe--EEEEEecCCCCCCCCCCCCCCCceEEEEEE
Q 029285           75 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHTCIAI  152 (196)
Q Consensus        75 ~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~--~l~l~~~~~~~~~~~~p~~~~~~~hi~f~v  152 (196)
                      .+..|.|.|.|+++|++||.++|||++.+..    ..+..+.|..++.  .++|....+....      ..+...++|.+
T Consensus       149 pv~~V~l~VgdL~ks~kyw~~~lgM~ileke----ek~t~~~mgYgd~q~~LElt~~~~~id~------~kg~griafai  218 (299)
T KOG2943|consen  149 PVLQVMLNVGDLQKSIKYWEKLLGMKILEKE----EKYTRARMGYGDEQCVLELTYNYDVIDR------AKGFGRIAFAI  218 (299)
T ss_pred             CeEEEEEEehhHHHHHHHHHHHhCcchhhhh----hhhhhhhhccCCcceEEEEEeccCcccc------cccceeEEEec
Confidence            4679999999999999999999999999752    2234456766654  4555544333211      12445566665


Q ss_pred             C--CHHHHHHHHHHCCCeEEe-----eCCC---ceEEEEEcCCCCeEEEEee
Q 029285          153 R--DVSKLKMILDKAGISYTL-----SKSG---RPAIFTRDPDANALEFTQV  194 (196)
Q Consensus       153 ~--dl~~~~~~l~~~G~~~~~-----~~~g---~~~~~~~DPdG~~iEl~e~  194 (196)
                      +  ++..+.+.++..+.++..     +.+|   ...+.+.||||+.+.|+..
T Consensus       219 p~d~~~~l~e~iK~~n~~i~~~lttl~tPgka~vqvvil~DPDgheicfVdd  270 (299)
T KOG2943|consen  219 PTDDLPKLQEAIKSANGTILTPLTTLDTPGKATVQVVILADPDGHEICFVDD  270 (299)
T ss_pred             cccccccHHHHHHHhccccccceeeccCCCcceeEEEEEECCCCceEEEecc
Confidence            5  888888888877655522     1222   4778899999999998753

>COG2514 Predicted ring-cleavage extradiol dioxygenase [General function prediction only]

Probab=98.58  E-value=4.5e-07  Score=73.43  Aligned_cols=97  Identities=24%  Similarity=0.318  Sum_probs=66.4

Q ss_pred             eceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCeEEEEEe--cCCCCCCCCCCCCCCCceEEEE
Q 029285           73 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLME--LPNPDPLSGRPEHGGRDRHTCI  150 (196)
Q Consensus        73 i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~l~l~~--~~~~~~~~~~p~~~~~~~hi~f  150 (196)
                      -..++||.|.|.|++++.+||+++|||+...+.+      ...|+..|+...|+..  +..... ...+....++..+.+
T Consensus       166 ~t~IGHvHL~v~~l~eA~~fY~~~LG~~~~~~~~------~A~F~a~G~YHHHia~N~W~s~~~-~~~~~~~~GLa~~~i  238 (265)
T COG2514         166 GTIIGHVHLKVADLEEAEQFYEDVLGLEVTARGP------SALFLASGDYHHHLAANTWNSRGA-RPRNANASGLAWLEI  238 (265)
T ss_pred             CcEEeEEEEEeCCHHHHHHHHHHhcCCeeeecCC------cceEEecCCcceeEEEeccccCCC-CCCCCCCCCcceEEE
Confidence            4679999999999999999999999999998622      2478999988777754  332221 122234456777888


Q ss_pred             EECCHHHHHHHHHHCCCeEEeeCCCceEEEEEcCCCCeEEEE
Q 029285          151 AIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFT  192 (196)
Q Consensus       151 ~v~dl~~~~~~l~~~G~~~~~~~~g~~~~~~~DPdG~~iEl~  192 (196)
                      .+++-..+...             +.+   ..||+|+.+.+.
T Consensus       239 ~~~~~~~l~~~-------------~~~---~~Dp~G~~i~~~  264 (265)
T COG2514         239 HTPDPEKLDAT-------------GTR---LTDPWGIVIRVV  264 (265)
T ss_pred             EcCCccccccc-------------ccc---eecCCCceEEEe
Confidence            87763322110             011   189999999875

>PF14506 CppA_N: CppA N-terminal; PDB: 3E0R_D

Probab=98.55  E-value=4.6e-06  Score=59.70  Aligned_cols=110  Identities=18%  Similarity=0.185  Sum_probs=63.6

Q ss_pred             eEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeC--CeEEEEEecCCCCCCCCCCCCCCCceEEEEEECC
Q 029285           77 HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG--AEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD  154 (196)
Q Consensus        77 ~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g--~~~l~l~~~~~~~~~~~~p~~~~~~~hi~f~v~d  154 (196)
                      .+-+|+|+|-+..++||++.|||++..+..      ..+++...  ...+.|-+.+....+  .-+..-...++.+.|++
T Consensus         2 ~~PvlRVnnR~~ni~FY~~~LGfkll~EEn------a~a~lg~~~~~erlvlEESP~~rtr--~V~G~KKl~~ivIkv~~   73 (125)
T PF14506_consen    2 IIPVLRVNNRDLNIDFYQKTLGFKLLSEEN------ALAILGDQQKEERLVLEESPSMRTR--AVEGPKKLNRIVIKVPN   73 (125)
T ss_dssp             EEEEEEESSHHHHHHHHTTTT--EEEEEET------TEEEEE-TT--EEEEEEE--TTT-B----SSS-SEEEEEEEESS
T ss_pred             cCceEEEcCHHHhHHHHHhccCcEEeeccc------cEEEecCCCCceEEEEecCCccccc--cccCcceeeEEEEEcCC
Confidence            466899999999999999999999987542      23455443  235555555544321  11112357799999998


Q ss_pred             HHHHHHHHHHCCCeEEe--eCCCceEEEEEcCCCCeEEEEeec
Q 029285          155 VSKLKMILDKAGISYTL--SKSGRPAIFTRDPDANALEFTQVD  195 (196)
Q Consensus       155 l~~~~~~l~~~G~~~~~--~~~g~~~~~~~DPdG~~iEl~e~~  195 (196)
                      -.++- .|.++|..+..  ....+++|-+.+|+|+.|.+...+
T Consensus        74 ~~EIe-~LLar~~~~~~l~kg~~gyAfe~vSPEgd~~llhaEd  115 (125)
T PF14506_consen   74 PKEIE-ALLARGAQYDRLYKGKNGYAFEAVSPEGDRFLLHAED  115 (125)
T ss_dssp             HHHHH-HHHHC-S--SEEEE-SSSEEEEEE-TT--EEEEE--S
T ss_pred             HHHHH-HHHhcccccceeEEcCCceEEEEECCCCCEEEEEEcC
Confidence            77653 44455555432  234578899999999999998654

>PRK10148 hypothetical protein; Provisional

Probab=98.51  E-value=1.2e-05  Score=60.37  Aligned_cols=108  Identities=14%  Similarity=0.034  Sum_probs=72.1

Q ss_pred             EEEcC-CHHHHHHHHHhccCCEEeeecCC--------------------CCCCceeEEEEeCCeEEEEEecCCCCCCCCC
Q 029285           80 GILCE-NLERSLEFYQNILGLEINEARPH--------------------DKLPYRGAWLWVGAEMIHLMELPNPDPLSGR  138 (196)
Q Consensus        80 ~l~v~-Dl~~a~~FY~~vLG~~~~~~~~~--------------------~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~  138 (196)
                      -|..+ |.++|++||+++||.++......                    .+...-++-+.+++..+.+.......     
T Consensus         6 yL~f~g~a~eAi~FY~~~Fgae~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~Ha~l~i~g~~lm~sD~~~~~-----   80 (147)
T PRK10148          6 YLSFAGNCADAIAYYQQTLGAELLYKISFGEMPKSAQDSEEGCPSGMQFPDTAIAHANVRIAGSDIMMSDAIPSG-----   80 (147)
T ss_pred             EEEeCCCHHHHHHHHHHHhCCEEEEEEEcccCCccccccccCCCccccCcCCcEEEEEEEECCEEEEEECCCCCc-----
Confidence            45564 89999999999999988653210                    11223456788888766665422111     


Q ss_pred             CCCCCCceEEEEEECCHHH---HHHHHHHCCCeEEee----CCCceEEEEEcCCCCeEEEEee
Q 029285          139 PEHGGRDRHTCIAIRDVSK---LKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  194 (196)
Q Consensus       139 p~~~~~~~hi~f~v~dl~~---~~~~l~~~G~~~~~~----~~g~~~~~~~DPdG~~iEl~e~  194 (196)
                      +..+ ...++++.++|.++   ++++| +.|.++..+    .+|.+...|+||.|+.|.|...
T Consensus        81 ~~~~-~~~~l~l~~~d~ee~~~~~~aL-a~gg~v~mpl~~~~wg~~~g~v~D~fGi~W~l~~~  141 (147)
T PRK10148         81 KAHY-SGFTLVLDTQDVEEGKRWFDNL-AANGKIEMAWQETFWAHGFGKVTDKFGVPWMINVV  141 (147)
T ss_pred             CCCC-CeEEEEEECCCHHHHHHHHHHh-hCCCEEEecchhcchhhccEEEECCCCCEEEEEec
Confidence            1111 23578888888877   45666 466777544    3677889999999999999764

>PF14696 Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal ; PDB: 1CJX_A 2R5V_A

Probab=98.36  E-value=1.8e-06  Score=64.16  Aligned_cols=121  Identities=11%  Similarity=0.040  Sum_probs=76.1

Q ss_pred             CCCceeceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceE
Q 029285           68 KIDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRH  147 (196)
Q Consensus        68 ~~~~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~p~~~~~~~h  147 (196)
                      .+|+.+.+++||.+.+.|.++...+++ .|||+.+.+.....    ...++-|+..+.|-..++.........+|.+..-
T Consensus         2 ~nP~g~~G~dFvEFa~~~~~~l~~~~~-~lGF~~~a~hrsk~----v~l~rQG~I~~vln~ep~s~a~~~~~~HG~sv~a   76 (139)
T PF14696_consen    2 DNPLGLDGFDFVEFAVPDAQALAQLFT-ALGFQPVARHRSKD----VTLYRQGDINFVLNSEPDSFAAEFAAQHGPSVCA   76 (139)
T ss_dssp             --TT-EEEEEEEEEE-SSTTSCHHHHC-CCCEEEECCECCCS----EEEEEETTEEEEEEEESTSCHHHHHHHHSSEEEE
T ss_pred             CCCCCCCCeEEEEEecCCHHHHHHHHH-HhCcceEEecCCcc----eEEEEeCCEEEEEeCCCcchHHHHHHhcCCEEEE
Confidence            478899999999999999877777775 59999998654322    2345667777777553322110001336788899


Q ss_pred             EEEEECCHHHHHHHHHHCCCeEEeeCC---CceEEEEEcCCCCeEEEEe
Q 029285          148 TCIAIRDVSKLKMILDKAGISYTLSKS---GRPAIFTRDPDANALEFTQ  193 (196)
Q Consensus       148 i~f~v~dl~~~~~~l~~~G~~~~~~~~---g~~~~~~~DPdG~~iEl~e  193 (196)
                      ++|.|+|...++++..++|.+....+.   .-..--++-+.|-++-|++
T Consensus        77 iafrV~Da~~A~~rA~~~GA~~~~~~~~~~e~~~paI~g~G~sl~yfVd  125 (139)
T PF14696_consen   77 IAFRVDDAAAAYERAVALGAEPVQEPTGPGELNIPAIRGIGGSLHYFVD  125 (139)
T ss_dssp             EEEEES-HHHHHHHHHHTT--EEEEEEETT-BEEEEEE-CCC-EEEEEE
T ss_pred             EEEEeCCHHHHHHHHHHcCCcCcccCCCCCcEeeeeEEccCCCEEEEEe
Confidence            999999999999999999998755431   1233345555555555554

>PLN02875 4-hydroxyphenylpyruvate dioxygenase

Probab=98.22  E-value=3.6e-05  Score=66.66  Aligned_cols=118  Identities=14%  Similarity=0.130  Sum_probs=79.5

Q ss_pred             eeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCC--CceeEEEEeCCeEEEEEecCCCC--C----------CC---C-
Q 029285           76 VHHVGILCENLERSLEFYQNILGLEINEARPHDKL--PYRGAWLWVGAEMIHLMELPNPD--P----------LS---G-  137 (196)
Q Consensus        76 l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~--~~~~~~l~~g~~~l~l~~~~~~~--~----------~~---~-  137 (196)
                      ++||.++|.|.+++..||+..|||+.+.....+..  ......++-|+..+.+-....+.  .          .+   . 
T Consensus         1 ~dhvef~v~da~~~~~~f~~~~GF~~~a~~~~~tg~~~~~s~~~r~g~i~fv~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (398)
T PLN02875          1 FHHVEFWCGDATNTARRFSWGLGMPLVAKSDLTTGNTTYASYLLRSGDLVFLFTAPYSPKIGAGDDDPASTAPHPSFSSD   80 (398)
T ss_pred             CeEEEEEcCCHHHHHHHHHHhcCCCeEeecCCCCCCcceEEEEEEeCCEEEEEeCCCCCccccccccccccccccccCcH
Confidence            58999999999999999999999998875542121  12234456666666666552220  0          00   0 


Q ss_pred             -----CCCCCCCceEEEEEECCHHHHHHHHHHCCCeEEeeCCC---------ceEEEEEcCCCCeEEEEe
Q 029285          138 -----RPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSG---------RPAIFTRDPDANALEFTQ  193 (196)
Q Consensus       138 -----~p~~~~~~~hi~f~v~dl~~~~~~l~~~G~~~~~~~~g---------~~~~~~~DPdG~~iEl~e  193 (196)
                           ...+|.+..-++|.|+|++++++++.++|..+..++.+         -...-+.-++|..+-|++
T Consensus        81 ~a~~~~~~HG~gV~dvaf~V~Da~~a~~~A~~~Ga~~~~~~~~~~d~~~~g~~~~~~I~~~G~~~h~lVd  150 (398)
T PLN02875         81 AARRFFAKHGLAVRAVGVLVEDAEEAFRTSVAHGARPVLEPTELGDEASGGKAVIAEVELYGDVVLRYVS  150 (398)
T ss_pred             HHHHHHHHcCCeeeEEEEEECCHHHHHHHHHHCCCeeccCCccccccccCceEEEEEEEccCCcEEEEEc
Confidence                 02367888899999999999999999999887544311         122335566666666665

>COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins [Amino acid transport and metabolism / General function prediction only]

Probab=98.02  E-value=1.7e-05  Score=66.59  Aligned_cols=103  Identities=16%  Similarity=0.211  Sum_probs=70.7

Q ss_pred             CceeceeeEEEEEcC--CHHHHHHHHHhccCCEEeeecCCCCC--Ccee-EEEEeCC-eEEEEEecCCCCCCCC---CCC
Q 029285           70 DYGVVSVHHVGILCE--NLERSLEFYQNILGLEINEARPHDKL--PYRG-AWLWVGA-EMIHLMELPNPDPLSG---RPE  140 (196)
Q Consensus        70 ~~~i~~l~hv~l~v~--Dl~~a~~FY~~vLG~~~~~~~~~~~~--~~~~-~~l~~g~-~~l~l~~~~~~~~~~~---~p~  140 (196)
                      ...+..++|+...|+  .++.+..||+.+|||+.....+..+.  ..+. ++....+ .++-|-...+..+..+   ..-
T Consensus       162 ~~g~~~IDHl~~nv~~~~md~w~~FY~~if~~~~~~~fdi~~p~tgl~Sram~Sp~G~vrlplN~s~~~~sqi~efl~~y  241 (363)
T COG3185         162 GVGLTAIDHLTHNVKAGQMDTWVLFYESLFGFREIQYFDIPGPITGLRSRAMVSPCGKVRLPLNESADDKSQIGEFLREY  241 (363)
T ss_pred             ccCceeechhhhhcchhhHHHHHHHHHHHhCccceeeEeccCCcccEEEeeEecCCCcEEeecccCCCchhHHHHHHHHh
Confidence            344578999998876  99999999999999998865543331  1222 2233223 3555544433322111   123


Q ss_pred             CCCCceEEEEEECCHHHHHHHHHHCCCeEEee
Q 029285          141 HGGRDRHTCIAIRDVSKLKMILDKAGISYTLS  172 (196)
Q Consensus       141 ~~~~~~hi~f~v~dl~~~~~~l~~~G~~~~~~  172 (196)
                      .|.|+.||+|.++|+-++.++|+++|+++...
T Consensus       242 ~G~GIQHIA~~T~dI~~tv~~lr~rG~~fl~i  273 (363)
T COG3185         242 RGEGIQHIAFGTDDIYATVAALRERGVKFLPI  273 (363)
T ss_pred             CCCcceEEEecccHHHHHHHHHHHcCCccCCC
Confidence            67899999999999999999999999987543

>KOG0638 consensus 4-hydroxyphenylpyruvate dioxygenase [Amino acid transport and metabolism]

Probab=98.02  E-value=2.2e-05  Score=64.99  Aligned_cols=103  Identities=16%  Similarity=0.163  Sum_probs=72.4

Q ss_pred             ceeceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCC--ceeEEEEeCCeEEEEEecCCCCC-CC--CCCCCCCCc
Q 029285           71 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLP--YRGAWLWVGAEMIHLMELPNPDP-LS--GRPEHGGRD  145 (196)
Q Consensus        71 ~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~--~~~~~l~~g~~~l~l~~~~~~~~-~~--~~p~~~~~~  145 (196)
                      -++.+++||.+.|.|...+..||+..|||+....+.-+...  ....-++-|...+.+...-.+.. ..  ..+.+|.+.
T Consensus        13 g~~l~f~Hi~F~vgna~q~A~~y~~~fGfep~A~~~letg~~~~~s~alr~g~~vFv~~s~~~p~~~~~G~~l~~Hgdgv   92 (381)
T KOG0638|consen   13 GKFLRFHHIEFWVGNAKQAARWYCSGFGFEPLAYRGLETGSREWASHALRQGKIVFVFNSAYNPDNSEYGDHLVKHGDGV   92 (381)
T ss_pred             cceeeeeEEEEEecCcHHHHHHHHhhcCCcchhcccccccchHHHHHHhhcCCEEEEEecCCCCCchhhhhhhhhcccch
Confidence            34789999999999999999999999999987644322211  11112344445455544433322 11  125577788


Q ss_pred             eEEEEEECCHHHHHHHHHHCCCeEEeeC
Q 029285          146 RHTCIAIRDVSKLKMILDKAGISYTLSK  173 (196)
Q Consensus       146 ~hi~f~v~dl~~~~~~l~~~G~~~~~~~  173 (196)
                      ..+||+|+|++.+.+.+.++|+.+..++
T Consensus        93 kdvafeVeD~da~~~~~va~Ga~v~~~p  120 (381)
T KOG0638|consen   93 KDVAFEVEDADAIFQEAVANGAKVVRPP  120 (381)
T ss_pred             hceEEEecchHHHHHHHHHcCCcccCCc
Confidence            8999999999999999999999886554

>PF06983 3-dmu-9_3-mt: 3-demethylubiquinone-9 3-methyltransferase; PDB: 1U7I_A 1TSJ_A 1U69_D 3L20_B 3OMS_A

Probab=97.43  E-value=0.0047  Score=44.47  Aligned_cols=96  Identities=22%  Similarity=0.212  Sum_probs=60.3

Q ss_pred             CCHHHHHHHHHhccCCEEeee---cCCC----CCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEEEECCHH
Q 029285           84 ENLERSLEFYQNILGLEINEA---RPHD----KLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVS  156 (196)
Q Consensus        84 ~Dl~~a~~FY~~vLG~~~~~~---~~~~----~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~p~~~~~~~hi~f~v~dl~  156 (196)
                      .|.++|.+||.++||-..+..   .+..    ....-.+.+..++..+.........     + .+ ....+++.+++.+
T Consensus        11 g~a~eA~~fY~~vf~~~~i~~~~~~~~~~~~~~~~v~ha~l~i~g~~lm~~D~~~~~-----~-~~-~~~sl~i~~~~~e   83 (116)
T PF06983_consen   11 GNAEEALEFYKEVFGGSEIMTFGDYPDDEPEWKDKVMHAELTIGGQKLMASDGGPDF-----P-FG-NNISLCIECDDEE   83 (116)
T ss_dssp             S-HHHHHHHHHHHSTTEEEEEEEE-TTTCTTHTTSEEEEEEEETTEEEEEEEESTS-----------TTEEEEEEESSHH
T ss_pred             CCHHHHHHHHHHHcCCCEEEEEeECCCCCCCCCCcEEEEEEEECCeEEEEECCCCCC-----C-CC-CcEEEEEEcCCHH
Confidence            699999999999999533321   1211    1123356788888887776554111     1 11 2357889999666


Q ss_pred             HH---HHHHHHCCCeEEeeCCCceEEEEEcCCCCeEEEE
Q 029285          157 KL---KMILDKAGISYTLSKSGRPAIFTRDPDANALEFT  192 (196)
Q Consensus       157 ~~---~~~l~~~G~~~~~~~~g~~~~~~~DPdG~~iEl~  192 (196)
                      ++   +++|.+.|-      +....-.+.|..|..|.|+
T Consensus        84 e~~~~f~~Ls~gG~------~~~~~G~v~DkFGv~Wqiv  116 (116)
T PF06983_consen   84 EIDRIFDKLSEGGQ------WFSRYGWVTDKFGVSWQIV  116 (116)
T ss_dssp             HHHHHHHHHHTTTE------TCCEEEEEE-TTS-EEEEE
T ss_pred             HHHHHHHHHHcCCC------ccceeEEEEeCCCCEEEeC
Confidence            54   677777774      3337789999999999885

>COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins [Amino acid transport and metabolism / General function prediction only]

Probab=97.31  E-value=0.0038  Score=52.68  Aligned_cols=117  Identities=13%  Similarity=0.078  Sum_probs=78.1

Q ss_pred             CCCCCCceeceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEE-eCCeEEEEEecCCCCCCCCCCCCCC
Q 029285           65 DSDKIDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLW-VGAEMIHLMELPNPDPLSGRPEHGG  143 (196)
Q Consensus        65 ~~~~~~~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~-~g~~~l~l~~~~~~~~~~~~p~~~~  143 (196)
                      ....+|+...++.+|.++|.|.+.+..=|-..|||+...+....     .+.+. -|+..+.+-..+.+........+|+
T Consensus        12 ~~~~~P~~~~GfeFvEf~~~d~~~~l~~l~~~lGF~~~~~Hrsk-----~v~l~rQGdinlvvn~~~~s~a~~f~~~Hgp   86 (363)
T COG3185          12 DTLANPEGTDGFEFVEFAVPDPQEALGALLGQLGFTAVAKHRSK-----AVTLYRQGDINLVVNAEPDSFAAEFLDKHGP   86 (363)
T ss_pred             ccccCCCCCCceeEEEEecCCHHHHHHHHHHHhCcccccccccc-----ceeEEEeCCEEEEEcCCCcchhhHHHHhcCC
Confidence            34456777889999999999995444445555999988754432     23343 3554444443333211111245777


Q ss_pred             CceEEEEEECCHHHHHHHHHHCCCeEEeeC-------------CCceEEEEEcCCC
Q 029285          144 RDRHTCIAIRDVSKLKMILDKAGISYTLSK-------------SGRPAIFTRDPDA  186 (196)
Q Consensus       144 ~~~hi~f~v~dl~~~~~~l~~~G~~~~~~~-------------~g~~~~~~~DPdG  186 (196)
                      ...-++|.|+|...++++..+.|.+....+             .|+..+|+.|.+|
T Consensus        87 s~~a~a~~V~DA~~A~a~A~a~gA~~~~~~~g~~e~~ipai~giggsllyfvd~~~  142 (363)
T COG3185          87 SACAMAFRVDDAEQALARALALGARTIDTEIGAGEVDIPAIRGIGGSLLYFVDRYG  142 (363)
T ss_pred             chheeEEeeCCHHHHHHHHHHcCCccccCCCCCccccccceeccCCcEEEEeccCC
Confidence            888999999999999999999998542221             3567788888873

>PF15067 FAM124: FAM124 family

Probab=97.10  E-value=0.0038  Score=49.86  Aligned_cols=103  Identities=19%  Similarity=0.276  Sum_probs=62.6

Q ss_pred             eeeEEEEEcC--CHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEe---CCeEEEEEecCCCCCCCCCCCCCCCceEEE
Q 029285           75 SVHHVGILCE--NLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV---GAEMIHLMELPNPDPLSGRPEHGGRDRHTC  149 (196)
Q Consensus        75 ~l~hv~l~v~--Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~---g~~~l~l~~~~~~~~~~~~p~~~~~~~hi~  149 (196)
                      .+-.+.|+|+  |.+.++.||+-+|+-+...+.+  ++    +|+..   .+..+.|.-...+......|.   ...-+.
T Consensus       128 EilRftly~~~~N~~d~vr~Yelil~~~~~~~k~--~F----C~F~lys~~~~~iQlsLK~lp~~~~p~p~---esavLq  198 (236)
T PF15067_consen  128 EILRFTLYCSFDNYEDMVRFYELILQREPTQQKE--DF----CFFTLYSQPGLDIQLSLKQLPPGMSPEPT---ESAVLQ  198 (236)
T ss_pred             cEEEEEEEecCCCHHHHHHHHHHHhccCcceeeC--Cc----EEEEEecCCCeEEEEEeccCCCCCCcccc---cceEEE
Confidence            4567889999  9999999999999988765443  21    44433   233444443322211111122   223599


Q ss_pred             EEECCHHHHHHHHHHCCCeEEeeCCCceEEEEEcCCCCeEEE
Q 029285          150 IAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEF  191 (196)
Q Consensus       150 f~v~dl~~~~~~l~~~G~~~~~~~~g~~~~~~~DPdG~~iEl  191 (196)
                      |.|.|+.+++-.|-.--..|...     .--+.|||||.|-+
T Consensus       199 F~V~~igqLvpLLPnpc~PIS~~-----rWqT~D~DGNkILL  235 (236)
T PF15067_consen  199 FRVEDIGQLVPLLPNPCSPISET-----RWQTEDYDGNKILL  235 (236)
T ss_pred             EEecchhhhcccCCCCcccccCC-----cceeeCCCCCEecc
Confidence            99999999865443333222222     24579999999854

>KOG0638 consensus 4-hydroxyphenylpyruvate dioxygenase [Amino acid transport and metabolism]

Probab=96.31  E-value=0.0031  Score=52.56  Aligned_cols=124  Identities=16%  Similarity=0.123  Sum_probs=80.7

Q ss_pred             ceeceeeEEEEEcC--CHHHHHHHHHhccCCEEeeecCCCCCCce-----eEEEEeCCeEEEEEecC-CCCCCC-C----
Q 029285           71 YGVVSVHHVGILCE--NLERSLEFYQNILGLEINEARPHDKLPYR-----GAWLWVGAEMIHLMELP-NPDPLS-G----  137 (196)
Q Consensus        71 ~~i~~l~hv~l~v~--Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~-----~~~l~~g~~~l~l~~~~-~~~~~~-~----  137 (196)
                      +.+.+++|+...++  .++.+..||.+.|||..-+..++......     ..-+......+.+.... .+.... .    
T Consensus       174 ~~~~~iDH~vgn~p~~em~sa~~wy~~~l~Fhrfwsvdd~~v~te~SaLrs~vlan~~esi~mpinEp~~G~k~ksQIqe  253 (381)
T KOG0638|consen  174 GGLNRIDHVVGNQPDGEMESALRWYEKCLGFHRFWSVDDSQVHTEYSALRSIVLANYEESIKMPINEPAPGKKKKSQIQE  253 (381)
T ss_pred             cceeehhhhhccCCcccchHHHHHHHHhhcccccccCCcchhhhHHHHHHHHHHhcCCccEEEeccCCCCCCccHHHHHH
Confidence            55789999999999  78899999999999998776654432211     11122223333322111 111110 1    


Q ss_pred             --CCCCCCCceEEEEEECCHHHHHHHHHHCCCeEEeeCC-------------------C------ceEEEEEcCCCCeEE
Q 029285          138 --RPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKS-------------------G------RPAIFTRDPDANALE  190 (196)
Q Consensus       138 --~p~~~~~~~hi~f~v~dl~~~~~~l~~~G~~~~~~~~-------------------g------~~~~~~~DPdG~~iE  190 (196)
                        ....|+|..||++.++|+-++.+.|+++|.++..+|.                   .      -....=.|-.|+.+.
T Consensus       254 yv~y~gG~GvQHiaL~tedIi~Ai~~lr~rG~eFLs~Ps~YYqnl~erl~~~~~~vked~~~l~el~ILvD~De~gyLLQ  333 (381)
T KOG0638|consen  254 YVEYHGGAGVQHIALNTEDIIEAIRGLRARGGEFLSPPSTYYQNLKERLSTSIRKVKEDIKLLEELGILVDFDENGYLLQ  333 (381)
T ss_pred             HHHhcCCCceeeeeecchHHHHHHHHHHhcCCccccCCHHHHHhHHHHhhhhhhhhhccHHHHHHcCeEEecCCCcEEee
Confidence              1235778999999999999999999999999864331                   0      122333577899988


Q ss_pred             EEee
Q 029285          191 FTQV  194 (196)
Q Consensus       191 l~e~  194 (196)
                      |+.-
T Consensus       334 IFTK  337 (381)
T KOG0638|consen  334 IFTK  337 (381)
T ss_pred             eecc
Confidence            8753

>PF13669 Glyoxalase_4: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; PDB: 3RMU_B 3ISQ_A 1JC5_D 1JC4_D 3HDP_A 2QH0_A 3GM5_A 3OA4_A 3CT8_A

Probab=95.88  E-value=0.044  Score=38.44  Aligned_cols=50  Identities=18%  Similarity=0.122  Sum_probs=39.4

Q ss_pred             eEEEEEECCHHHHHHHHHH-CCCeEEee----CCCceEEEEEcCCC-CeEEEEeec
Q 029285          146 RHTCIAIRDVSKLKMILDK-AGISYTLS----KSGRPAIFTRDPDA-NALEFTQVD  195 (196)
Q Consensus       146 ~hi~f~v~dl~~~~~~l~~-~G~~~~~~----~~g~~~~~~~DPdG-~~iEl~e~~  195 (196)
                      +|++|.|+|++++.+.+.+ .|+.....    ..+.+..++..++| ..|||.++.
T Consensus         1 dHv~i~V~Dl~~a~~~~~~~lG~~~~~~~~~~~~~v~~~~~~~~~~~~~iELi~p~   56 (109)
T PF13669_consen    1 DHVGIVVPDLDAAAAFYCDVLGFEPWERYRDEPQGVRVAFLYLGDGPVQIELIQPL   56 (109)
T ss_dssp             EEEEEEES-HHHHHHHHHHCTTHEEEEEEEEGCTTEEEEEEEETTETEEEEEEEES
T ss_pred             CEEEEEcCCHHHHHHHHHHhhCCcEEEEEecCCCCEEEEEEEeCCCcEEEEEEEeC
Confidence            5999999999999999998 89765432    23456778888888 689999875

>PF14507 CppA_C: CppA C-terminal; PDB: 3E0R_D

Probab=95.22  E-value=0.061  Score=37.69  Aligned_cols=91  Identities=19%  Similarity=0.266  Sum_probs=43.1

Q ss_pred             eeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEEEEC-
Q 029285           75 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR-  153 (196)
Q Consensus        75 ~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~p~~~~~~~hi~f~v~-  153 (196)
                      .+..+.|.|.| +++++||+++||-.+.                   ..+.+.+..+++-... +...=+.-.+-|.|+ 
T Consensus         5 ~~e~i~LNV~d-~~~~~fy~~~f~~~~~-------------------~~l~f~ea~G~DL~~~-~~~twDLe~Lkf~V~~   63 (101)
T PF14507_consen    5 EFESIELNVPD-AKSQSFYQSIFGGQLP-------------------FFLTFQEAQGPDLTIE-NNETWDLEMLKFQVPK   63 (101)
T ss_dssp             EE-EEEEEE-T--T---S--H---HHHT-------------------TTEEEEE---CCGSS--TTSBSSEEEEEEEES-
T ss_pred             EEEEEEEeCCC-hhHHHHHHhccccCCC-------------------ceEEEeeccCCccccC-CCcEEeeEEEEEEecC
Confidence            35678999999 8899999998862211                   2244444444332221 112224557888888 


Q ss_pred             --CHHHHHHHHHHCCCeEEeeCCCceEEEEEcCCCCeE
Q 029285          154 --DVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANAL  189 (196)
Q Consensus       154 --dl~~~~~~l~~~G~~~~~~~~g~~~~~~~DPdG~~i  189 (196)
                        |+..+.+++.+.++  -. +...+.+-+.||.|..|
T Consensus        64 ~~Dl~~L~~~le~~~~--fi-dKk~k~l~~~Dps~IEl   98 (101)
T PF14507_consen   64 DFDLAALKSHLEEQEF--FI-DKKEKFLVTSDPSQIEL   98 (101)
T ss_dssp             S--HHHHHHHTTTS-E--E---TT-SEEEEE-TTS-EE
T ss_pred             cccHHHHHHHhcccce--Ee-cCCceEEEEECCcceEE
Confidence              77888999988432  22 23367788999998766

>KOG2944 consensus Glyoxalase [Carbohydrate transport and metabolism]

Probab=94.17  E-value=0.23  Score=37.55  Aligned_cols=53  Identities=15%  Similarity=0.174  Sum_probs=39.9

Q ss_pred             ceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEe-CCeEEEEEe
Q 029285           74 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLME  128 (196)
Q Consensus        74 ~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~-g~~~l~l~~  128 (196)
                      .+++||+|.|+|++++..-+++ +|.+...+.++... ...+|+.. ++..+++..
T Consensus       114 rGfgHIci~V~di~sac~~lke-kGV~f~Kk~~dGk~-K~iaF~~dpDgywiei~~  167 (170)
T KOG2944|consen  114 RGFGHICIEVDDINSACERLKE-KGVRFKKKLKDGKM-KPIAFLHDPDGYWIEIEL  167 (170)
T ss_pred             CccceEEEEeCCHHHHHHHHHH-hCceeeecCCCccc-cceeEEECCCCCeEEEee
Confidence            6899999999999999999999 99997766554443 34566654 355666653

>cd08353 Glo_EDI_BRP_like_7 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=93.70  E-value=0.28  Score=35.52  Aligned_cols=54  Identities=15%  Similarity=0.231  Sum_probs=38.6

Q ss_pred             ceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEe-CCeEEEEEe
Q 029285           74 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLME  128 (196)
Q Consensus        74 ~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~-g~~~l~l~~  128 (196)
                      .++.|+++.|.|++++.+-..+ .|.++...........+.+|+.. +|..++|++
T Consensus        86 ~g~~hia~~v~d~d~~~~~l~~-~G~~~~~~~~~~~~~~r~~~~~DPdG~~iEl~e  140 (142)
T cd08353          86 LGLRRVMFAVDDIDARVARLRK-HGAELVGEVVQYENSYRLCYIRGPEGILIELAE  140 (142)
T ss_pred             CCceEEEEEeCCHHHHHHHHHH-CCCceeCCceecCCCeEEEEEECCCCCEEEeee
Confidence            4688999999999999999998 89988753222222345555654 356777775

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>PLN02367 lactoylglutathione lyase

Probab=92.28  E-value=0.86  Score=36.86  Aligned_cols=56  Identities=21%  Similarity=0.361  Sum_probs=41.9

Q ss_pred             ceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEe-CCeEEEEEecCC
Q 029285           74 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPN  131 (196)
Q Consensus        74 ~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~-g~~~l~l~~~~~  131 (196)
                      .+++|+++.|.|++++.+-..+ .|.++... +......+.+|+.. +|..++|++...
T Consensus       168 ~G~~HIaf~VdDVdaa~erL~a-~Gv~~v~~-P~~g~~~riaFIkDPDGn~IEL~e~~~  224 (233)
T PLN02367        168 RGFGHIGITVDDVYKACERFEE-LGVEFVKK-PNDGKMKGIAFIKDPDGYWIEIFDLKT  224 (233)
T ss_pred             CCceEEEEEcCCHHHHHHHHHH-CCCEEEeC-CccCCceEEEEEECCCCCEEEEEeccc
Confidence            4899999999999999999988 99999853 32222234566654 467899987654

>cd07249 MMCE Methylmalonyl-CoA epimerase (MMCE)

Probab=92.14  E-value=0.79  Score=32.04  Aligned_cols=53  Identities=19%  Similarity=0.321  Sum_probs=35.3

Q ss_pred             ceeeEEEEEcCCHHHHHHHHHhccCCEEeeecC-CCCCCceeEEEEeC---CeEEEEE
Q 029285           74 VSVHHVGILCENLERSLEFYQNILGLEINEARP-HDKLPYRGAWLWVG---AEMIHLM  127 (196)
Q Consensus        74 ~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~-~~~~~~~~~~l~~g---~~~l~l~  127 (196)
                      .++.|+++.|.|++++.+...+ .|.++..... .........|+..+   |..++++
T Consensus        71 ~g~~h~~f~v~d~~~~~~~l~~-~G~~~~~~~~~~~~~g~~~~~~d~~~~~g~~iE~~  127 (128)
T cd07249          71 EGLHHIAFEVDDIDAALARLKA-QGVRLLQEGPRIGAGGKRVAFLHPKDTGGVLIELV  127 (128)
T ss_pred             CceEEEEEEeCCHHHHHHHHHH-CCCeeeccCCCccCCCCEEEEEecCCCceEEEEec
Confidence            5688999999999999999988 7998876432 12222333444444   4455554

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases.

>cd08342 HPPD_N_like N-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HPPD) and hydroxymandelate Synthase (HmaS)

Probab=91.18  E-value=1.4  Score=31.81  Aligned_cols=58  Identities=12%  Similarity=0.015  Sum_probs=43.4

Q ss_pred             ceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEe-CCeEEEEEecCCC
Q 029285           74 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNP  132 (196)
Q Consensus        74 ~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~-g~~~l~l~~~~~~  132 (196)
                      .++.|+++.|.|++++.+-.++ .|.++...........+.+++.. +|..++|++....
T Consensus        68 ~g~~hia~~V~Dvda~~~~l~~-~G~~v~~~p~~~~~~~~~~~i~dp~G~~ie~~~~~~~  126 (136)
T cd08342          68 DGVCDVAFRVDDAAAAYERAVA-RGAKPVQEPVEEPGELKIAAIKGYGDSLHTLVDRKGY  126 (136)
T ss_pred             CceEEEEEEeCCHHHHHHHHHH-cCCeEccCceecCCeEEEEEEeccCCcEEEEEecCCC
Confidence            4688999999999999999988 89999864333234456667765 4678999986544

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of HPP to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two, instead of three, su

>PRK11478 putative lyase; Provisional

Probab=90.79  E-value=1.7  Score=30.56  Aligned_cols=54  Identities=9%  Similarity=0.174  Sum_probs=36.0

Q ss_pred             ceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEe-CCeEEEEEe
Q 029285           74 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLME  128 (196)
Q Consensus        74 ~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~-g~~~l~l~~  128 (196)
                      .++.|+++.|.|++++.+-..+ .|.++.........+.+.+|+.. +|..+++++
T Consensus        74 ~g~~hi~f~v~d~~~~~~~l~~-~G~~~~~~~~~~~~g~~~~~~~DPdG~~iEl~~  128 (129)
T PRK11478         74 CGLRHLAFSVDDIDAAVAHLES-HNVKCEAIRVDPYTQKRFTFFNDPDGLPLELYE  128 (129)
T ss_pred             CceeEEEEEeCCHHHHHHHHHH-cCCeeeccccCCCCCCEEEEEECCCCCEEEEEe
Confidence            4678999999999999998877 89987643222222234455543 355677664

>cd08347 PcpA_C_like C-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=90.49  E-value=1.6  Score=32.81  Aligned_cols=51  Identities=10%  Similarity=0.087  Sum_probs=34.8

Q ss_pred             CceEEEEEECCHHHHHHHHHH-CCCeEEeeCCCceEEEEEc-CCCCeEEEEee
Q 029285          144 RDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRD-PDANALEFTQV  194 (196)
Q Consensus       144 ~~~hi~f~v~dl~~~~~~l~~-~G~~~~~~~~g~~~~~~~D-PdG~~iEl~e~  194 (196)
                      |++|+++.|+|+++..+...+ .|.++.....+...++..+ .+|..++|.+.
T Consensus         1 gl~HI~i~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~l~l~~~   53 (157)
T cd08347           1 GLHGVTLTVRDPEATAAFLTDVLGFREVGEEGDRVRLEEGGGGPGAVVDVLEE   53 (157)
T ss_pred             CcccEEEEeCCHHHHHHHHHHhcCCEEEeeeCCEEEEEecCCCCCCEEEEEeC
Confidence            468999999999999999876 5887755433322222222 24788888764

The C-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd08352 Glo_EDI_BRP_like_1 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=89.95  E-value=2.8  Score=28.86  Aligned_cols=50  Identities=18%  Similarity=0.049  Sum_probs=35.7

Q ss_pred             CceEEEEEECCHHHHHHHHH-HCCCeEEeeC---C-CceEEEEEcCCCCeEEEEe
Q 029285          144 RDRHTCIAIRDVSKLKMILD-KAGISYTLSK---S-GRPAIFTRDPDANALEFTQ  193 (196)
Q Consensus       144 ~~~hi~f~v~dl~~~~~~l~-~~G~~~~~~~---~-g~~~~~~~DPdG~~iEl~e  193 (196)
                      ++.|+++.|.|++++.+.+. ..|..+....   . ....+.+..+++..+++..
T Consensus         3 ~~~hi~l~v~d~~~a~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~   57 (125)
T cd08352           3 GIHHVAIICSDYEKSKEFYVEILGFKVIREVYRPERGSYKLDLLLNGGYQLELFS   57 (125)
T ss_pred             ccceEEEEcCCHHHHHHHHHHhcCCEEeeeeecCCCCcEEEEEecCCCcEEEEEE
Confidence            56899999999999999987 4898875432   1 1233445556677777765

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>PF13670 PepSY_2: Peptidase propeptide and YPEB domain This Prosite motif covers only the active site

Probab=89.80  E-value=1.4  Score=29.35  Aligned_cols=40  Identities=18%  Similarity=0.225  Sum_probs=33.4

Q ss_pred             CHHHHHHHHHHCCCeEEe---eCCCceEEEEEcCCCCeEEEEe
Q 029285          154 DVSKLKMILDKAGISYTL---SKSGRPAIFTRDPDANALEFTQ  193 (196)
Q Consensus       154 dl~~~~~~l~~~G~~~~~---~~~g~~~~~~~DPdG~~iEl~e  193 (196)
                      ..+++.+.+++.|+.+..   +.+|.+.+...|.||+.+|+.=
T Consensus        30 ~~~~~~~~l~~~G~~v~~ve~~~~g~yev~~~~~dG~~~ev~v   72 (83)
T PF13670_consen   30 SIEQAVAKLEAQGYQVREVEFDDDGCYEVEARDKDGKKVEVYV   72 (83)
T ss_pred             CHHHHHHHHHhcCCceEEEEEcCCCEEEEEEEECCCCEEEEEE
Confidence            789999999999997643   2456788999999999999864

This is family M4 in the peptidase classification.

>PLN03042 Lactoylglutathione lyase; Provisional

Probab=88.72  E-value=2.9  Score=32.55  Aligned_cols=56  Identities=21%  Similarity=0.356  Sum_probs=39.9

Q ss_pred             ceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEe-CCeEEEEEecCC
Q 029285           74 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPN  131 (196)
Q Consensus        74 ~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~-g~~~l~l~~~~~  131 (196)
                      .++.|+++.|.|++++.+...+ .|+.+... +......+.+|+.. +|..++|++...
T Consensus       120 ~G~~Hlaf~V~Dvd~~~~~L~~-~Gv~v~~~-p~~~~~~~~~fi~DPdG~~IEl~e~~~  176 (185)
T PLN03042        120 RGFGHIGITVDDVYKACERFEK-LGVEFVKK-PDDGKMKGLAFIKDPDGYWIEIFDLKR  176 (185)
T ss_pred             CCccEEEEEcCCHHHHHHHHHH-CCCeEEeC-CccCCceeEEEEECCCCCEEEEEECCC
Confidence            4799999999999999999998 99988743 22221223455543 467888887544

>cd07242 Glo_EDI_BRP_like_6 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=88.66  E-value=2.5  Score=29.64  Aligned_cols=50  Identities=14%  Similarity=0.164  Sum_probs=33.4

Q ss_pred             CceEEEEEECCHHHHHHHHHHC----CCeEEeeCCCceEEEEEcCCCCeEEEEee
Q 029285          144 RDRHTCIAIRDVSKLKMILDKA----GISYTLSKSGRPAIFTRDPDANALEFTQV  194 (196)
Q Consensus       144 ~~~hi~f~v~dl~~~~~~l~~~----G~~~~~~~~g~~~~~~~DPdG~~iEl~e~  194 (196)
                      ++.|+++.|+|++++.+.+.+.    |.+......+ ...|+...++..+++.+.
T Consensus         1 ~i~Hv~i~v~d~~~~~~Fy~~~l~~~G~~~~~~~~~-~~~~~~~~~~~~i~l~~~   54 (128)
T cd07242           1 GIHHVELTVRDLERSRAFYDWLLGLLGFEEVKEWED-GRSWRAGDGGTYLVLQQA   54 (128)
T ss_pred             CCceEEEEeCCHHHHHHHHHHHHhhcCCEEEEeecc-CceEEecCCceEEEEEec
Confidence            3579999999999998888775    8877554322 223333344566666654

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07268 Glo_EDI_BRP_like_4 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=88.65  E-value=8.5  Score=28.87  Aligned_cols=73  Identities=16%  Similarity=0.143  Sum_probs=46.4

Q ss_pred             eeEEEEEcCCHHHHHHHHHhccCCEEeee-cCCCCCCceeEE------EEeCCeEEEEEecCCCCCCCCCCCCCCCceEE
Q 029285           76 VHHVGILCENLERSLEFYQNILGLEINEA-RPHDKLPYRGAW------LWVGAEMIHLMELPNPDPLSGRPEHGGRDRHT  148 (196)
Q Consensus        76 l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~-~~~~~~~~~~~~------l~~g~~~l~l~~~~~~~~~~~~p~~~~~~~hi  148 (196)
                      ++|++|+|++.+.+.+|-+..+..-.... ..-.+.  ..+-      +.+++..+..++.+-+...  .+.+ .|.-||
T Consensus         2 ~DHialR~n~~~~A~~w~~~l~~~G~llSen~INGR--PI~l~~L~qPl~~~~~~I~cvELP~P~~k--~Yp~-eGWEHI   76 (149)
T cd07268           2 IDHIALRVNENQTAERWKEGLLQCGELLSENEINGR--PIALIKLEKPLQFAGWSISIVELPFPKDK--KYPQ-EGWEHI   76 (149)
T ss_pred             CceEEEeeCCHHHHHHHHHHHHHhchhhhccccCCe--eEEEEEcCCCceeCCcEEEEEEeCCCCCC--CCCC-CCceEE
Confidence            58999999999999999988764432221 111111  1122      4456778888888766432  2222 356799


Q ss_pred             EEEEC
Q 029285          149 CIAIR  153 (196)
Q Consensus       149 ~f~v~  153 (196)
                      -+.++
T Consensus        77 E~Vlp   81 (149)
T cd07268          77 EIVIP   81 (149)
T ss_pred             EEEec
Confidence            99988

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>PF06185 YecM: YecM protein; InterPro: IPR010393 This family consists of several bacterial YecM proteins of unknown function

Probab=88.50  E-value=5.1  Score=31.23  Aligned_cols=77  Identities=19%  Similarity=0.141  Sum_probs=43.1

Q ss_pred             ceeeEEEEEcCCHHHHHHHHHhccCCEEeee-cCCCCCCcee----EEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEE
Q 029285           74 VSVHHVGILCENLERSLEFYQNILGLEINEA-RPHDKLPYRG----AWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHT  148 (196)
Q Consensus        74 ~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~-~~~~~~~~~~----~~l~~g~~~l~l~~~~~~~~~~~~p~~~~~~~hi  148 (196)
                      ..++|++++|++.+.+.+|-+..+..-..-. ..-.+.+...    .=+.+++..+.+++.+-+...  .+.+ .|.-||
T Consensus        33 ~~~DHialRvn~~~~A~~~~~~l~~~G~llSen~INGRPI~l~~L~qPL~~~~~~I~~vELP~P~~K--~Yp~-eGWEHI  109 (185)
T PF06185_consen   33 YEIDHIALRVNSNETAERWKQALLQCGELLSENMINGRPICLFKLNQPLQFGGWSIDCVELPYPKDK--RYPQ-EGWEHI  109 (185)
T ss_dssp             -EEEEEEEE-S-HHHHHHHHHHHTTTEEEEEEEEETTEEEEEEEEEEEEEETTEEEEEEEEE---SS----SS--EEEEE
T ss_pred             cCCcEEEEecCCHHHHHHHHHHHHHhChhhhhceeCCeeEEEEEcCCchhcCCeeEEEEEeCCCCCC--CCCC-CCceEE
Confidence            4689999999999999999999876643321 1111111100    114567888999988766431  2222 366799


Q ss_pred             EEEEC
Q 029285          149 CIAIR  153 (196)
Q Consensus       149 ~f~v~  153 (196)
                      -|.++
T Consensus       110 E~Vip  114 (185)
T PF06185_consen  110 EFVIP  114 (185)
T ss_dssp             EEE--
T ss_pred             EEEec
Confidence            99998

; PDB: 1K4N_A.

>TIGR03645 glyox_marine lactoylglutathione lyase family protein

Probab=87.72  E-value=3.6  Score=30.91  Aligned_cols=52  Identities=13%  Similarity=0.139  Sum_probs=37.6

Q ss_pred             CceEEEEEECCHHHHHHHHHH-CCCeEEee-----C----C--------C-----ceEEEEEcCCCCeEEEEeec
Q 029285          144 RDRHTCIAIRDVSKLKMILDK-AGISYTLS-----K----S--------G-----RPAIFTRDPDANALEFTQVD  195 (196)
Q Consensus       144 ~~~hi~f~v~dl~~~~~~l~~-~G~~~~~~-----~----~--------g-----~~~~~~~DPdG~~iEl~e~~  195 (196)
                      ++.|+++.|.|+++..+..++ .|.++...     .    .        |     ....++..++|..||+.+.+
T Consensus         4 ~i~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ieL~~~~   78 (162)
T TIGR03645         4 TFSHIGISVPDLDAAVKFYTEVLGWYLIMPPTEIVEDDSAIGEMCTDVFGEGWGSFKIAHLSTGDRIGVELFEFK   78 (162)
T ss_pred             eEEEEEEEeCCHHHHHHHHHHhcCCEEEeccccccCCCCCCCchhhHHhCCCcceeeEEEEecCCCCcEEEEecc
Confidence            578999999999999999876 68766311     0    0        1     23456666778889999864

Members of this protein family share homology with lactoylglutathione lyase (glyoxalase I) and are found mainly in marine members of the gammaproteobacteria, including CPS_0532 from Colwellia psychrerythraea 34H. This family excludes a well-separated, more narrowly distributed paralogous family, exemplified by CPS_3492 from C. psychrerythraea. The function is of this protein family is unknown.

>cd06587 Glo_EDI_BRP_like This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

Probab=87.30  E-value=3  Score=27.53  Aligned_cols=48  Identities=15%  Similarity=0.214  Sum_probs=36.5

Q ss_pred             EEEEEECCHHHHHHHHHH-CCCeEEeeCC--CceEEEEEcCCCCeEEEEeec
Q 029285          147 HTCIAIRDVSKLKMILDK-AGISYTLSKS--GRPAIFTRDPDANALEFTQVD  195 (196)
Q Consensus       147 hi~f~v~dl~~~~~~l~~-~G~~~~~~~~--g~~~~~~~DPdG~~iEl~e~~  195 (196)
                      |+.+.++|+++..+.+.+ .|.+......  +....++.++ +..++|.+.+
T Consensus         1 Hi~i~~~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~-~~~i~l~~~~   51 (112)
T cd06587           1 HVGLTVSDLEAAVAFYEEVLGFEVLFRNGNGGAEFAVLGLG-GTRLELFEGD   51 (112)
T ss_pred             CcceeeCCHHHHHHHHHhccCCEEEEeeccCCEEEEEEecC-CceEEEecCC
Confidence            788999999999999987 9988766553  3455666655 7888887754

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain clas

>PRK10291 glyoxalase I; Provisional

Probab=87.30  E-value=4.1  Score=28.86  Aligned_cols=57  Identities=16%  Similarity=0.132  Sum_probs=39.0

Q ss_pred             ceeeEEEEEcCCHHHHHHHHHhccCCEEeeec-CCCCCCceeEEEEe-CCeEEEEEecCC
Q 029285           74 VSVHHVGILCENLERSLEFYQNILGLEINEAR-PHDKLPYRGAWLWV-GAEMIHLMELPN  131 (196)
Q Consensus        74 ~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~-~~~~~~~~~~~l~~-g~~~l~l~~~~~  131 (196)
                      .++.|+++.|.|++++.+-.++ .|.++.... +........+|+.. +|..++|++...
T Consensus        64 ~~~~hlaf~V~d~~~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~i~DPdG~~iel~~~~~  122 (129)
T PRK10291         64 TAYGHIALSVDNAAEACEKIRQ-NGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKD  122 (129)
T ss_pred             CCeeEEEEEeCCHHHHHHHHHH-cCCccccCCcccCCCceEEEEEECCCCCEEEEEEccc
Confidence            3688999999999999998887 898876421 22122223455543 467899988653

>TIGR03081 metmalonyl_epim methylmalonyl-CoA epimerase

Probab=86.90  E-value=2.7  Score=29.32  Aligned_cols=53  Identities=25%  Similarity=0.385  Sum_probs=34.1

Q ss_pred             ceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCC-CCceeEEEE---eCCeEEEEE
Q 029285           74 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDK-LPYRGAWLW---VGAEMIHLM  127 (196)
Q Consensus        74 ~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~-~~~~~~~l~---~g~~~l~l~  127 (196)
                      .++.|+++.|.|++++.+.... .|.++....+... .+.+.+|+.   .+|..++++
T Consensus        71 ~g~~~i~~~v~di~~~~~~l~~-~G~~~~~~~~~~~~~g~~~~~~~~~dp~G~~~E~~  127 (128)
T TIGR03081        71 GGIHHIAIEVDDIEAALETLKE-KGVRLIDEEPRIGAGGKPVAFLHPKSTGGVLIELE  127 (128)
T ss_pred             CceEEEEEEcCCHHHHHHHHHH-CCCcccCCCCccCCCCCEEEEecccccCcEEEEec
Confidence            4678999999999999998877 7888765322221 122334552   245555554

Members of this protein family are the enzyme methylmalonyl-CoA epimerase (EC 5.1.99.1), also called methylmalonyl-CoA racemase. This enzyme converts (2R)-methylmalonyl-CoA to (2S)-methylmalonyl-CoA, which is then a substrate for methylmalonyl-CoA mutase (TIGR00642). It is known in bacteria, archaea, and as a mitochondrial protein in animals. It is closely related to lactoylglutathione lyase (TIGR00068), which is also called glyoxylase I, and is also a homodimer.

>cd08346 PcpA_N_like N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=86.65  E-value=4.4  Score=27.98  Aligned_cols=51  Identities=18%  Similarity=0.228  Sum_probs=35.8

Q ss_pred             CceEEEEEECCHHHHHHHHHH-CCCeEEeeC---C--CceEEEEEcC---CCCeEEEEee
Q 029285          144 RDRHTCIAIRDVSKLKMILDK-AGISYTLSK---S--GRPAIFTRDP---DANALEFTQV  194 (196)
Q Consensus       144 ~~~hi~f~v~dl~~~~~~l~~-~G~~~~~~~---~--g~~~~~~~DP---dG~~iEl~e~  194 (196)
                      ++.|+++.|+|++++.+...+ .|.+.....   .  +...+++.+.   .|..++|.+.
T Consensus         1 ~i~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~   60 (126)
T cd08346           1 GLHHVTLITRDAQETVDFYTDVLGLRLVKKTVNQDDPGTYHLFFGDGLGSPGTLLTFFEW   60 (126)
T ss_pred             CcccEEEEcCChhHhHHHHHHccCCEEeeeEeccCCCceEEEEEecCCCCCCCEEEEEec
Confidence            357999999999999999876 688765432   1  1234555554   5677888764

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07245 Glo_EDI_BRP_like_9 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=86.04  E-value=3.2  Score=27.84  Aligned_cols=50  Identities=12%  Similarity=0.143  Sum_probs=33.3

Q ss_pred             ceEEEEEECCHHHHHHHHH-HCCCeEEeeCCC-ceEEEEEcCCCCeEEEEee
Q 029285          145 DRHTCIAIRDVSKLKMILD-KAGISYTLSKSG-RPAIFTRDPDANALEFTQV  194 (196)
Q Consensus       145 ~~hi~f~v~dl~~~~~~l~-~~G~~~~~~~~g-~~~~~~~DPdG~~iEl~e~  194 (196)
                      ++|+++.|+|++++.+... -.|......... ....++..+++..++|.+.
T Consensus         1 i~Hi~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~i~l~~~   52 (114)
T cd07245           1 LDHVALRVPDLEASRAFYTDVLGLEEGPRPPFLFPGAWLYAGDGPQLHLIEE   52 (114)
T ss_pred             CCeEEEecCCHHHHHHHHHHccCCcccCcCCCCCCceEEEeCCCcEEEEEec
Confidence            3699999999999988875 677765433221 2334555555556777654

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases.

>PRK11700 hypothetical protein; Provisional

Probab=86.01  E-value=9.8  Score=29.67  Aligned_cols=76  Identities=21%  Similarity=0.205  Sum_probs=48.1

Q ss_pred             eceeeEEEEEcCCHHHHHHHHHhccCCEEee-ecCCCCCCceeEE------EEeCCeEEEEEecCCCCCCCCCCCCCCCc
Q 029285           73 VVSVHHVGILCENLERSLEFYQNILGLEINE-ARPHDKLPYRGAW------LWVGAEMIHLMELPNPDPLSGRPEHGGRD  145 (196)
Q Consensus        73 i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~-~~~~~~~~~~~~~------l~~g~~~l~l~~~~~~~~~~~~p~~~~~~  145 (196)
                      -...+|++++|++.+.|.+|-+..+..-..- ...-.+.  ..+-      +.+++..+..++.+-+...  .+.+ .|.
T Consensus        37 ~~~~DHialR~n~~~tAe~w~~~l~~~G~llSen~INGR--PI~l~~L~qPl~~~~w~I~cvELP~P~~k--~Yp~-eGW  111 (187)
T PRK11700         37 QLEADHIALRCNQNETAERWRQGFLQCGELLSENIINGR--PICLFELDQPLQVGHWSIDCVELPYPGEK--RYPH-EGW  111 (187)
T ss_pred             cccCcEEEEeeCCHHHHHHHHHHHHHhchhhhccccCCe--eEEEEEcCCCceeCCcEEEEEEeCCCCCC--CCCC-CCc
Confidence            3467999999999999999988866442221 1111111  1222      4456778888888766432  2222 356


Q ss_pred             eEEEEEEC
Q 029285          146 RHTCIAIR  153 (196)
Q Consensus       146 ~hi~f~v~  153 (196)
                      -||-+.++
T Consensus       112 EHIElVlp  119 (187)
T PRK11700        112 EHIELVLP  119 (187)
T ss_pred             eEEEEEec
Confidence            79999988

>cd07233 Glyoxalase_I Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

Probab=85.47  E-value=4.8  Score=27.69  Aligned_cols=50  Identities=24%  Similarity=0.279  Sum_probs=34.7

Q ss_pred             ceEEEEEECCHHHHHHHHHH-CCCeEEeeC--C--CceEEEEEcCC---CCeEEEEee
Q 029285          145 DRHTCIAIRDVSKLKMILDK-AGISYTLSK--S--GRPAIFTRDPD---ANALEFTQV  194 (196)
Q Consensus       145 ~~hi~f~v~dl~~~~~~l~~-~G~~~~~~~--~--g~~~~~~~DPd---G~~iEl~e~  194 (196)
                      +.|+++.|+|++++.+...+ .|.+.....  .  +...+++..++   +..+++.+.
T Consensus         1 ~~hv~i~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~   58 (121)
T cd07233           1 FLHTMLRVKDLEKSLDFYTDVLGMKLLRRKDFPEGKFTLVFLGYPDEDSEGVLELTYN   58 (121)
T ss_pred             CeeEEEEecCcHHHHHHHHhccCCeEEEEEecCCCceEEEEecCCCCCCccEEEEEec
Confidence            36999999999999999976 498875432  2  22335555554   567877653

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic gly

>cd07235 MRD Mitomycin C resistance protein (MRD)

Probab=85.43  E-value=3.6  Score=28.61  Aligned_cols=46  Identities=15%  Similarity=0.248  Sum_probs=29.5

Q ss_pred             eEEEEEECCHHHHHHHHHHCCCeEEeeCCCceEEEEEcCCCCeEEE
Q 029285          146 RHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEF  191 (196)
Q Consensus       146 ~hi~f~v~dl~~~~~~l~~~G~~~~~~~~g~~~~~~~DPdG~~iEl  191 (196)
                      .|+.+.|+|+++..+..++.|.++.....+...+.+..++|..+.+
T Consensus         2 ~~i~l~V~D~~~a~~FY~~LGf~~~~~~~~~~~~~~~~~~~~~l~l   47 (122)
T cd07235           2 DAVGIVVADMAKSLDFYRRLGFDFPEEADDEPHVEAVLPGGVRLAW   47 (122)
T ss_pred             ceEEEEeccHHHHHHHHHHhCceecCCcCCCCcEEEEeCCCEEEEE
Confidence            5899999999999998887888764332211223344444444433

Mitomycin C (MC) is a naturally occurring antibiotic, and antitumor agent used in the treatment of cancer. Its antitumor activity is exerted primarily through monofunctional and bifunctional alkylation of DNA. MRD binds to MC and functions as a component of the MC exporting system. MC is bound to MRD by a stacking interaction between a His and a Trp. MRD adopts a structural fold similar to bleomycin resistance protein, glyoxalase I, and extradiol dioxygenases; and it has binding sites at an identical location to binding sites in these evolutionarily related enzymes.

>cd08348 BphC2-C3-RGP6_C_like The single-domain 2,3-dihydroxybiphenyl 1,2-dioxygenases (BphC, EC 1

Probab=84.95  E-value=7.5  Score=27.48  Aligned_cols=50  Identities=12%  Similarity=0.167  Sum_probs=34.3

Q ss_pred             ceEEEEEECCHHHHHHHHHH-CCCeEEeeCCCceEEEEEcC--CCCeEEEEee
Q 029285          145 DRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDP--DANALEFTQV  194 (196)
Q Consensus       145 ~~hi~f~v~dl~~~~~~l~~-~G~~~~~~~~g~~~~~~~DP--dG~~iEl~e~  194 (196)
                      +.|+.+.|.|++++.+...+ .|.++.....+....++..+  .+..+.+.+.
T Consensus         2 i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~   54 (134)
T cd08348           2 LSHVVLYVRDLEAMVRFYRDVLGFTVTDRGPLGGLVFLSRDPDEHHQIALITG   54 (134)
T ss_pred             eeEEEEEecCHHHHHHHHHHhcCCEEEeeccCCcEEEEEecCCCceEEEEEec
Confidence            57999999999999999876 88887654432234454443  3456766553

13.11.39) from Rhodococcus globerulus P6, BphC2-RGP6 and BphC3-RGP6, and similar proteins. This subfamily contains Rhodococcus globerulus P6 BphC2-RGP6 and BphC3-RGP6, and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, yielding 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid. This is the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Most type I extradiol dioxygenases are activated by Fe(II). Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC2-RGP6 and BphC3-RGP6 are

>cd07241 Glo_EDI_BRP_like_3 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=84.55  E-value=7.3  Score=26.80  Aligned_cols=50  Identities=20%  Similarity=0.227  Sum_probs=33.7

Q ss_pred             ceEEEEEECCHHHHHHHHHH-CCCeEEee---C-CCceEEEEEcCCCCeEEEEee
Q 029285          145 DRHTCIAIRDVSKLKMILDK-AGISYTLS---K-SGRPAIFTRDPDANALEFTQV  194 (196)
Q Consensus       145 ~~hi~f~v~dl~~~~~~l~~-~G~~~~~~---~-~g~~~~~~~DPdG~~iEl~e~  194 (196)
                      ++|+++.|+|+++..+...+ .|.++...   + .+....|+.-.+|..+++.+.
T Consensus         2 ~~Hi~l~v~dl~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~   56 (125)
T cd07241           2 IEHVAIWTKDLERMKAFYVTYFGATSNEKYHNPRKGFESYFLSFDDGARLELMTR   56 (125)
T ss_pred             ceEEEEEecCHHHHHHHHHHHhCCEeeceEeCCCCCceEEEEecCCCcEEEEEcC
Confidence            57999999999999988876 57765321   1 233344454446777888753

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>PF12681 Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B 1JIF_B 1JIE_B 1QTO_A 3OXH_A 2PJS_A 2RBB_A 3SK1_B 3SK2_B 3RRI_A

Probab=82.98  E-value=5.5  Score=26.82  Aligned_cols=54  Identities=19%  Similarity=0.182  Sum_probs=34.9

Q ss_pred             eceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEe-CCeEEEEE
Q 029285           73 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLM  127 (196)
Q Consensus        73 i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~-g~~~l~l~  127 (196)
                      ..+..|+.+.|.|++++.+...+ +|.++.........+.+..++.- +|..++++
T Consensus        54 ~~~~~~~~~~v~dv~~~~~~l~~-~G~~~~~~~~~~~~g~~~~~~~DPdG~~ie~~  108 (108)
T PF12681_consen   54 PGGGFHLCFEVEDVDALYERLKE-LGAEIVTEPRDDPWGQRSFYFIDPDGNRIEFC  108 (108)
T ss_dssp             SSSEEEEEEEESHHHHHHHHHHH-TTSEEEEEEEEETTSEEEEEEE-TTS-EEEEE
T ss_pred             CCceeEEEEEEcCHHHHHHHHHH-CCCeEeeCCEEcCCCeEEEEEECCCCCEEEeC
Confidence            34678999999999999999998 89997653322222334444443 35555553

...

>cd07263 Glo_EDI_BRP_like_16 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=82.74  E-value=5.7  Score=26.94  Aligned_cols=31  Identities=13%  Similarity=0.225  Sum_probs=26.5

Q ss_pred             ceeeEEEEEcCCHHHHHHHHHhccCCEEeeec
Q 029285           74 VSVHHVGILCENLERSLEFYQNILGLEINEAR  105 (196)
Q Consensus        74 ~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~  105 (196)
                      .+..|+.+.|.|++++.+--.+ .|+++....
T Consensus        66 ~~~~~~~~~v~di~~~~~~l~~-~g~~~~~~~   96 (119)
T cd07263          66 GGTPGLVLATDDIDATYEELKA-RGVEFSEEP   96 (119)
T ss_pred             CCceEEEEEehHHHHHHHHHHh-CCCEEeecc
Confidence            4678999999999999999987 899887543

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07255 Glo_EDI_BRP_like_12 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=82.50  E-value=9.1  Score=26.51  Aligned_cols=48  Identities=8%  Similarity=0.095  Sum_probs=33.1

Q ss_pred             CceEEEEEECCHHHHHHHHHH-CCCeEEeeCCCceEEEEEcCC-CCeEEEEe
Q 029285          144 RDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDPD-ANALEFTQ  193 (196)
Q Consensus       144 ~~~hi~f~v~dl~~~~~~l~~-~G~~~~~~~~g~~~~~~~DPd-G~~iEl~e  193 (196)
                      .+.|+.+.|+|+++..+...+ .|.++.....  ..+++..++ +..+.|.+
T Consensus         2 ~i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~~--~~~~l~~~~~~~~l~l~~   51 (125)
T cd07255           2 RIGAVTLRVADLERSLAFYQDVLGLEVLERTD--STAVLGTGGKRPLLVLEE   51 (125)
T ss_pred             EEEEEEEEECCHHHHHHHHHhccCcEEEEcCC--CEEEEecCCCeEEEEEEe
Confidence            467999999999999998875 7888765532  234444443 45566654

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07252 BphC1-RGP6_N_like N-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=80.96  E-value=9.7  Score=26.54  Aligned_cols=48  Identities=10%  Similarity=0.059  Sum_probs=31.6

Q ss_pred             CceEEEEEECCHHHHHHHHHH-CCCeEEeeCCCceEEEEEcC-CCCeEEEE
Q 029285          144 RDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDP-DANALEFT  192 (196)
Q Consensus       144 ~~~hi~f~v~dl~~~~~~l~~-~G~~~~~~~~g~~~~~~~DP-dG~~iEl~  192 (196)
                      ++.|+++.|+|++++.+...+ .|.++.....+ ..+++..+ .+..+.+.
T Consensus         2 ~l~~v~l~v~Dl~~s~~FY~~~LG~~~~~~~~~-~~~~~~~~~~~~~~~l~   51 (120)
T cd07252           2 SLGYLGVESSDLDAWRRFATDVLGLQVGDRPED-GALYLRMDDRAWRIAVH   51 (120)
T ss_pred             cccEEEEEeCCHHHHHHHHHhccCceeccCCCC-CeEEEEccCCceEEEEE
Confidence            457999999999999998876 68876544222 23444443 33445554

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the N-terminal, non-catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of 2,3-dihydroxybiphenyl 1,2-dioxygenases. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its N-

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	196
3rmu_A	134	Crystal Structure Of Human Methylmalonyl-Coa Epimer		2e-06

>pdb|3RMU|A Chain A, Crystal Structure Of Human Methylmalonyl-Coa Epimerase, Mcee Length = 134

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 58/121 (47%), Gaps = 14/121 (11%)
Query: 76  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRG---AWLWVG---AEMIHLMEL 129
           ++HV I   +LE++  FY+NILG +++EA P   LP  G    ++ +G    E++H + L
Sbjct: 6   LNHVAIAVPDLEKAAAFYKNILGAQVSEAVP---LPEHGVSVVFVNLGNTKMELLHPLGL 62
Query: 130 PNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGI-----SYTLSKSGRPAIFTRDP 184
            +P     +    G   H CI + +++   M L K  I        +   G+P IF    
Sbjct: 63  DSPIAGFLQKNKAGGMHHICIEVDNINAAVMDLKKKKIRSLSEEVKIGAHGKPVIFLHPK 122
Query: 185 D 185
           D
Sbjct: 123 D 123

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	196
2p25_A	126	Glyoxalase family protein; structural genomics, MC	5e-32
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	1e-28
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	5e-28
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	2e-25
1nki_A	135	Probable fosfomycin resistance protein; potassium	2e-23
3ghj_A	141	Putative integron gene cassette protein; integron	6e-23
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	3e-22
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	1e-20
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	7e-20
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	2e-19
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	6e-18
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	1e-17
3huh_A	152	Virulence protein STM3117; structural genomics, ny	3e-17
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	4e-17
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	2e-16
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	3e-16
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	8e-16
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	1e-14
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	2e-14
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	5e-14
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	5e-14
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	2e-12
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	6e-06
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	2e-12
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	4e-12
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	1e-05
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	4e-11
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	5e-11
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	5e-11
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	6e-11
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	2e-10
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	3e-10
3rri_A	135	Glyoxalase/bleomycin resistance protein/dioxygena;	6e-10
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	2e-09
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	5e-09
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	1e-08
3fcd_A	134	Lyase, ORF125EGC139; lactoylglutathione lyase, YEC	1e-08
2i7r_A	118	Conserved domain protein; structural genomics cons	2e-08
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	4e-08
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	3e-06
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	4e-08
3m2o_A	164	Glyoxalase/bleomycin resistance protein; unknown f	7e-08
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	7e-08
3bt3_A	148	Glyoxalase-related enzyme, ARAC type; VOC superfam	8e-08
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	1e-07
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	2e-07
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	8e-06
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	2e-07
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	4e-07
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	6e-07
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	9e-07
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	1e-06
3eck_A	365	Protein (homoprotocatechuate 2,3-dioxygenase); oxi	2e-06
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	2e-06
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	2e-06
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	2e-04
1xrk_A	124	Bleomycin resistance protein; arm exchange, ligand	8e-06
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	1e-05
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	3e-05
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	6e-05
1qto_A	122	Bleomycin-binding protein; arm-exchange, antibioti	6e-05
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	7e-05
1ecs_A	126	Bleomycin resistance protein; arm-exchange, antibi	7e-05
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	8e-05
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	8e-05
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	1e-04
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	2e-04
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	2e-04
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	7e-04

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis} Length = 126

 Score =  111 bits (279), Expect = 5e-32
 Identities = 27/123 (21%), Positives = 47/123 (38%), Gaps = 5/123 (4%)

Query: 75  SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP 134
            +HHV I   N + +  FY   LG E+       +       L +G++ + +        
Sbjct: 5   EIHHVAINASNYQATKNFYVEKLGFEVLRENHRPEKNDIKLDLKLGSQELEIFISDQFPA 64

Query: 135 LSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALE 190
               PE  G  RH    +  + ++   L++ GI     +    +G+   F  DPD   LE
Sbjct: 65  RPSYPEALGL-RHLAFKVEHIEEVIAFLNEQGIETEPLRVDDFTGKKMTFFFDPDGLPLE 123

Query: 191 FTQ 193
             +
Sbjct: 124 LHE 126

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str} Length = 126

 Score =  102 bits (257), Expect = 1e-28
 Identities = 26/125 (20%), Positives = 45/125 (36%), Gaps = 13/125 (10%)

Query: 73  VVSVHHVGILC--ENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELP 130
           +  + HV +       E +  FY   +G+E    +P +     G W   G + IH+    
Sbjct: 8   IQGIDHVQVAAPVGCEEEARAFYGETIGMEEIP-KPEELKKRGGCWFKCGNQEIHIGVEQ 66

Query: 131 NPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKS--GRPAIFTRDPDANA 188
           N +P         +  H    +  + + K  L K GI      +       +  DP  N 
Sbjct: 67  NFNP--------AKRAHPAFYVLKIDEFKQELIKQGIEVIDDHARPDVIRFYVSDPFGNR 118

Query: 189 LEFTQ 193
           +EF +
Sbjct: 119 IEFME 123

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans} Length = 134

 Score =  101 bits (253), Expect = 5e-28
 Identities = 31/129 (24%), Positives = 44/129 (34%), Gaps = 11/129 (8%)

Query: 76  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLM-------E 128
           VHHV ++  + ++S EFY N LG E+       K       L  G   + +         
Sbjct: 6   VHHVALIVSDYDKSYEFYVNQLGFEVIRENHRPKRHDYKLDLKCGDIELEIFGNKLTDSN 65

Query: 129 LPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYT----LSKSGRPAIFTRDP 184
              P      P      RH    + DV   +  L   GI          +G+   F  DP
Sbjct: 66  YCAPPERISWPREACGLRHLAFYVEDVEASRQELIALGIRVEEVRYDDYTGKKMAFFFDP 125

Query: 185 DANALEFTQ 193
           D   LE  +
Sbjct: 126 DGLPLELHE 134

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2 Length = 141

 Score = 94.9 bits (236), Expect = 2e-25
 Identities = 27/122 (22%), Positives = 51/122 (41%), Gaps = 12/122 (9%)

Query: 73  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 132
           + S++H+ +   +L++S+ F+  +LGL ++           GA+L  G   + L      
Sbjct: 2   LQSLNHLTLAVSDLQKSVTFWHELLGLTLHARWNT------GAYLTCGDLWVCLSYDEAR 55

Query: 133 DPLSGRPEHGGRDRHTCIAIR--DVSKLKMILDKAGISY-TLSKSGRPAIFTRDPDANAL 189
                 P       H    +   D   L   L++AG++    +KS   + +  DPD + L
Sbjct: 56  QY---VPPQESDYTHYAFTVAEEDFEPLSQRLEQAGVTIWKQNKSEGASFYFLDPDGHKL 112

Query: 190 EF 191
           E 
Sbjct: 113 EL 114

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A Length = 135

 Score = 89.5 bits (222), Expect = 2e-23
 Identities = 26/120 (21%), Positives = 51/120 (42%), Gaps = 11/120 (9%)

Query: 73  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 132
           +  ++H+ +   +L  S+ FY+++LG  +      +    +GA+L +G+  + L   P  
Sbjct: 2   LTGLNHLTLAVADLPASIAFYRDLLGFRL------EARWDQGAYLELGSLWLCLSREPQY 55

Query: 133 DPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISY-TLSKSGRPAIFTRDPDANALEF 191
               G P          IA  D ++    L   G+     ++S   + +  DPD + LE 
Sbjct: 56  ----GGPAADYTHYAFGIAAADFARFAAQLRAHGVREWKQNRSEGDSFYFLDPDGHRLEA 111

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium} Length = 141

 Score = 88.5 bits (220), Expect = 6e-23
 Identities = 29/124 (23%), Positives = 52/124 (41%), Gaps = 18/124 (14%)

Query: 75  SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP 134
            +  V +  +NLE+S +FY  ILG E        +  +   W+   A M+ L E      
Sbjct: 28  GLFEVAVKVKNLEKSSQFYTEILGFEAGLLDSARR--WNFLWVSGRAGMVVLQE------ 79

Query: 135 LSGRPEHGGRDRHTCIAI--RDVSKLKMILDKAGISYTLSKSGRP----AIFTRDPDANA 188
                +   + +H    +   ++  LK  L+  G+S     +       +++  DP+ +A
Sbjct: 80  ----EKENWQQQHFSFRVEKSEIEPLKKALESKGVSVHGPVNQEWMQAVSLYFADPNGHA 135

Query: 189 LEFT 192
           LEFT
Sbjct: 136 LEFT 139

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102} Length = 156

 Score = 87.2 bits (216), Expect = 3e-22
 Identities = 26/130 (20%), Positives = 43/130 (33%), Gaps = 13/130 (10%)

Query: 76  VHHVGILCENLERSLEFYQNILGLEI------NEARPHDKLPYRGAWLWVGAE-MIHLME 128
           VHH+ +  ++++ S  FY  ILGL                   + A        ++ L  
Sbjct: 20  VHHIALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASGKVANFITPDGTILDLFG 79

Query: 129 LPNPDPLSGRPEH-GGRDRHTCIAIRDVSKLKMI--LDKAGISYTLSKSGRP---AIFTR 182
            P   P    PE    R  H    I      + +  + +  I+       RP    ++  
Sbjct: 80  EPELSPPDPNPEKTFTRAYHLAFDIDPQLFDRAVTVIGENKIAIAHGPVTRPTGRGVYFY 139

Query: 183 DPDANALEFT 192
           DPD   +E  
Sbjct: 140 DPDGFMIEIR 149

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP} Length = 136

 Score = 80.5 bits (199), Expect = 7e-20
 Identities = 28/124 (22%), Positives = 44/124 (35%), Gaps = 7/124 (5%)

Query: 73  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 132
           +  V HV +   +L+ S  +Y  IL  +       D   +       G   I L E    
Sbjct: 3   LSGVSHVSLTVRDLDISCRWYTEILDWKELVRGRGDTTSFAHGV-LPGGLSIVLREHDGG 61

Query: 133 DPLSGRPEHGGRDRHTCIAIRDVSKLKMI---LDKAGISYT--LSKSGRPAIFTRDPDAN 187
                     G D H   ++  ++ L ++   L KAG ++T          +  RD D  
Sbjct: 62  GTDLFDETRPGLD-HLSFSVESMTDLDVLEERLAKAGAAFTPTQELPFGWILAFRDADNI 120

Query: 188 ALEF 191
           ALE 
Sbjct: 121 ALEA 124

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens} Length = 160

 Score = 80.2 bits (198), Expect = 2e-19
 Identities = 28/131 (21%), Positives = 55/131 (41%), Gaps = 15/131 (11%)

Query: 73  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPN- 131
             ++    +  ++L+ +  FY+++ GLE        KLP +  +   G +M+ L +    
Sbjct: 6   PSAIMETALYADDLDAAEAFYRDVFGLE-----MVLKLPGQLVFFKCGRQMLLLFDPQES 60

Query: 132 --PDPLSGRPEHGGRDR-HTCIAIR---DVSKLKMILDKAGI---SYTLSKSGRPAIFTR 182
              D  +  P HG   + H C       +V + K   +   I    Y    +G  +++ R
Sbjct: 61  SRADANNPIPRHGAVGQGHFCFYADDKAEVDEWKTRFEALEIPVEHYHRWPNGSYSVYIR 120

Query: 183 DPDANALEFTQ 193
           DP  N++E  +
Sbjct: 121 DPAGNSVEVGE 131

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} Length = 134

 Score = 75.2 bits (185), Expect = 6e-18
 Identities = 32/128 (25%), Positives = 56/128 (43%), Gaps = 10/128 (7%)

Query: 76  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP- 134
           ++HV I   +LE++  FY+NILG +++EA P  +      ++ +G   + L+     D  
Sbjct: 6   LNHVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVNLGNTKMELLHPLGLDSP 65

Query: 135 --LSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYT-----LSKSGRPAIF--TRDPD 185
                +    G   H CI + +++   M L K  I        +   G+P IF   +D  
Sbjct: 66  IAGFLQKNKAGGMHHICIEVDNINAAVMDLKKKKIRSLSEEVKIGAHGKPVIFLHPKDCG 125

Query: 186 ANALEFTQ 193
              +E  Q
Sbjct: 126 GVLVELEQ 133

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2 Length = 139

 Score = 74.9 bits (184), Expect = 1e-17
 Identities = 17/124 (13%), Positives = 38/124 (30%), Gaps = 11/124 (8%)

Query: 73  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLP-YRGAWLWVGAEMIHLMELPN 131
           +  + H+  +  +LER     + +       A   ++    R  +  +G   + +M+   
Sbjct: 2   IEGLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGDIWVAIMQGEK 61

Query: 132 PDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDAN 187
                   E         I   D  +    + K G+     +        +I+  D D +
Sbjct: 62  L------AERSYNHIAFKIDDADFDRYAERVGKLGLDMRPPRPRVEGEGRSIYFYDDDNH 115

Query: 188 ALEF 191
             E 
Sbjct: 116 MFEL 119

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygenase, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A Length = 152

 Score = 74.3 bits (182), Expect = 3e-17
 Identities = 25/128 (19%), Positives = 49/128 (38%), Gaps = 13/128 (10%)

Query: 73  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 132
           +  + H+ +   ++  ++ FY+ +LG      + +         L  GA+ I+L +    
Sbjct: 21  IDRIDHLVLTVSDISTTIRFYEEVLGFSAVTFKQNR------KALIFGAQKINLHQQEME 74

Query: 133 DPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP-------AIFTRDPD 185
                     G      I    ++ +   + +AGIS       R        +I+ RDPD
Sbjct: 75  FEPKASRPTPGSADLCFITSTPINDVVSEILQAGISIVEGPVERTGATGEIMSIYIRDPD 134

Query: 186 ANALEFTQ 193
            N +E +Q
Sbjct: 135 GNLIEISQ 142

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A Length = 133

 Score = 73.2 bits (180), Expect = 4e-17
 Identities = 22/125 (17%), Positives = 49/125 (39%), Gaps = 7/125 (5%)

Query: 76  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPD-P 134
           VHH+G   +N++ +L+ ++ +  +E +E    +       ++  G   + L+     D P
Sbjct: 8   VHHIGYAVKNIDSALKKFKRLGYVEESEVVRDEVRKVYIQFVINGGYRVELVAPDGEDSP 67

Query: 135 LSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGIS------YTLSKSGRPAIFTRDPDANA 188
           ++   + G    H C  + D+ K    + + G +         +   R   F    D   
Sbjct: 68  INKTIKKGSTPYHICYEVEDIQKSIEEMSQIGYTLFKKAEIAPAIDNRKVAFLFSTDIGL 127

Query: 189 LEFTQ 193
           +E  +
Sbjct: 128 IELLE 132

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A Length = 133

 Score = 71.4 bits (175), Expect = 2e-16
 Identities = 18/124 (14%), Positives = 41/124 (33%), Gaps = 11/124 (8%)

Query: 73  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLP-YRGAWLWVGAEMIHLMELPN 131
           +  + H+ ++ ++L ++  F QNI   E   +         +  +  +    I +ME  +
Sbjct: 2   ISGLSHITLIVKDLNKTTAFLQNIFNAEEIYSSGDKTFSLSKEKFFLIAGLWICIMEGDS 61

Query: 132 PDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDAN 187
                   E         I   +V +    +   G+     +        +I+  D D +
Sbjct: 62  L------QERTYNHIAFQIQSEEVDEYTERIKALGVEMKPERPRVQGEGRSIYFYDFDNH 115

Query: 188 ALEF 191
             E 
Sbjct: 116 LFEL 119

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str} Length = 127

 Score = 70.7 bits (173), Expect = 3e-16
 Identities = 22/125 (17%), Positives = 43/125 (34%), Gaps = 10/125 (8%)

Query: 76  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE-MIHLMELPNPDP 134
           + HV +   NLE+  +FY    G   N+   +    +   +L       + +M   +   
Sbjct: 4   IEHVALWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSFEDGARLEIMSRTDVTG 63

Query: 135 LSGRPEHGGRDRHTCIAIRDVSKLKMI---LDKAGISYT----LSKSGRPAIFTRDPDAN 187
            +     G    H  I+      +  +   L + G +      ++  G       DP+ N
Sbjct: 64  KTTGENLGW--AHIAISTGTKEAVDELTEKLRQDGFAIAGEPRMTGDGYYESVVLDPEGN 121

Query: 188 ALEFT 192
            +E T
Sbjct: 122 RIEIT 126

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A* Length = 133

 Score = 69.6 bits (170), Expect = 8e-16
 Identities = 22/126 (17%), Positives = 45/126 (35%), Gaps = 13/126 (10%)

Query: 73  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 132
           +  + H+ +   ++  +  FY+ +LG++                L  G + I+L +L N 
Sbjct: 8   ISHLDHLVLTVADIPTTTNFYEKVLGMKAVSFGAG------RIALEFGHQKINLHQLGNE 61

Query: 133 DPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGR-------PAIFTRDPD 185
                +    G      I    +S     ++  G++       R        + + RDPD
Sbjct: 62  FEPKAQNVRVGSADLCFITDTVLSDAMKHVEDQGVTIMEGPVKRTGAQGAITSFYFRDPD 121

Query: 186 ANALEF 191
            N +E 
Sbjct: 122 GNLIEV 127

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans} Length = 161

 Score = 67.2 bits (164), Expect = 1e-14
 Identities = 23/127 (18%), Positives = 45/127 (35%), Gaps = 9/127 (7%)

Query: 76  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPD-- 133
           + H+GI   +++  L FY   L L++           + A+L +G   I L+E  + +  
Sbjct: 9   LDHIGIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQGVKIAFLEIGESKIELLEPLSEESP 68

Query: 134 PLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISY-----TLSKSGRPAIF--TRDPDA 186
                 + G    H  I ++ + +    + + G+            G    F   R    
Sbjct: 69  IAKFIQKRGEGIHHIAIGVKSIEERIQEVKENGVQMINDEPVPGARGAQVAFLHPRSARG 128

Query: 187 NALEFTQ 193
              EF +
Sbjct: 129 VLYEFCE 135

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125} Length = 146

 Score = 66.8 bits (163), Expect = 2e-14
 Identities = 24/126 (19%), Positives = 39/126 (30%), Gaps = 13/126 (10%)

Query: 76  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPL 135
           +HHV I  ++LE S+ F+  +LG    E         RG     G   +  ++  +    
Sbjct: 21  LHHVEINVDHLEESIAFWDWLLGELGYE-DYQS--WSRGKSYKHGKTYLVFVQTEDRFQT 77

Query: 136 SGRPEHGGRDRHTCIAIRD---VSKLKMILDKAGISYTLSKSGRP-------AIFTRDPD 185
                      H          V +L   L + G                  A+F  DP+
Sbjct: 78  PTFHRKRTGLNHLAFHAASREKVDELTQKLKERGDPILYEDRHPFAGGPNHYAVFCEDPN 137

Query: 186 ANALEF 191
              +E 
Sbjct: 138 RIKVEI 143

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6 Length = 153

 Score = 65.6 bits (160), Expect = 5e-14
 Identities = 18/142 (12%), Positives = 47/142 (33%), Gaps = 23/142 (16%)

Query: 73  VVSVHHVGILCENLERSLEFYQNILGLEI-----NEARPHDKLP------YRGAWLWV-- 119
           ++ + +V I+ E+L+ ++ F++  +GL +      E     ++          A +    
Sbjct: 9   LLRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPD 67

Query: 120 GAEMIHLMELPNPDPLSGRPEHGGRD---RHTCIAIRDVSKLKMILDKAGISYTLSKSGR 176
           G   I L     P  ++                  + D+ ++   L K G    + +  +
Sbjct: 68  GHSRIELSRFLTPPTIADHRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAE-LVGEVVQ 126

Query: 177 P-----AIFTRDPDANALEFTQ 193
                   + R  +   +   +
Sbjct: 127 YENSYRLCYIRGVEGILIGLAE 148

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens} Length = 147

 Score = 65.5 bits (159), Expect = 5e-14
 Identities = 22/124 (17%), Positives = 43/124 (34%), Gaps = 13/124 (10%)

Query: 75  SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP 134
            + H+ +  ++++ +  FY  ILG+E+   +           L  G +  +L E+     
Sbjct: 27  RLDHIVMTVKSIKDTTMFYSKILGMEVMTFKEDR------KALCFGDQKFNLHEVGKEFE 80

Query: 135 LSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP-------AIFTRDPDAN 187
                   G      I    + ++   L    +        R        +I+ RDPD N
Sbjct: 81  PKAAHPVPGSLDICLITEVPLEEMIQHLKACDVPIEEGPVPRTGAKGPIMSIYFRDPDRN 140

Query: 188 ALEF 191
            +E 
Sbjct: 141 LIEV 144

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp} Length = 335

 Score = 63.6 bits (154), Expect = 2e-12
 Identities = 24/127 (18%), Positives = 45/127 (35%), Gaps = 9/127 (7%)

Query: 76  VHHVGILCENLERSLEFYQNILGLEI-----NEARPHDKLPYRGAWLWVGAEMIHLMELP 130
           +HH+  +  + + + +FY  +LGL +     N   P     Y G     G     +   P
Sbjct: 9   IHHITAIVGHPQENTDFYAGVLGLRLVKQTVNFDDPGTYHLYFGN--EGGKPGTIITFFP 66

Query: 131 NPDPLSGRPEHGGRDRHT-CIAIRDVSKLKMILDKAGISYTLSKS-GRPAIFTRDPDANA 188
                 G    G     +  +    ++  +  L+K  + YT  +  G   +   DP    
Sbjct: 67  WAGARQGVIGDGQVGVTSYVVPKGAMAFWEKRLEKFNVPYTKIERFGEQYVEFDDPHGLH 126

Query: 189 LEFTQVD 195
           LE  + +
Sbjct: 127 LEIVERE 133

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp} Length = 335

 Score = 44.7 bits (105), Expect = 6e-06
 Identities = 21/122 (17%), Positives = 31/122 (25%), Gaps = 14/122 (11%)

Query: 76  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPL 135
                +L E  +++ +  +NI+GLE                      +I L   P     
Sbjct: 154 FGGATLLSEQPDKTADLLENIMGLERVGKEGDFVRYRSAGD---IGNVIDLKLTPIGRGQ 210

Query: 136 SGRPEHGGRDRHTCIAIRDVSKLKMILDK---AGISYTLSKSGR---PAIFTRDPDANAL 189
            G     G   H      D              G   T     R    AI+ R+      
Sbjct: 211 MGA----GTVHHIAWRANDDEDQLDWQRYIASHGYGVT-PVRDRNYFNAIYFREHGEILF 265

Query: 190 EF 191
           E 
Sbjct: 266 EI 267

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus} Length = 145

 Score = 60.8 bits (147), Expect = 2e-12
 Identities = 23/129 (17%), Positives = 46/129 (35%), Gaps = 21/129 (16%)

Query: 81  ILCENLERSLEFYQNILGLEINEARPHDKLPYR---GAWLWVGAEMIHLMELPNPDPLSG 137
           + C ++  S  F+ ++LG E+   RP ++  Y    G  +     M+  +   +   LSG
Sbjct: 11  LYCFDINVSQSFFVDVLGFEVKYERPDEEFVYLTLDGVDV-----MLEGIAGKSRKWLSG 65

Query: 138 RPEHG-GRDRHTCIAIRDVSKLKMILDKAGISYTL------------SKSGRPAIFTRDP 184
             E   G   +    + D+  L   ++++                  S + +     + P
Sbjct: 66  DLEFPLGSGVNFQWDVIDIEPLYQRVNESAADSIYLALESKSYQCGDSIATQKQFMVQTP 125

Query: 185 DANALEFTQ 193
           D     F Q
Sbjct: 126 DGYLFRFCQ 134

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10 Length = 338

 Score = 62.7 bits (152), Expect = 4e-12
 Identities = 21/129 (16%), Positives = 43/129 (33%), Gaps = 11/129 (8%)

Query: 76  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMEL----PN 131
            HH+ ++ +N   +  FY+N+LGL   +   +   P     L+ G +             
Sbjct: 31  HHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPS-MYHLFYGDKTGSPGTELSFFEI 89

Query: 132 PDPLSGRPEHGGRDRHTCIAIRDVSKL---KMILDKAGISYT--LSKSGRPAIFTRDPDA 186
           P                 + +     L   K   +K  + ++   + + RPA+   D + 
Sbjct: 90  PLVGRTYRGTNA-ITRIGLLVPSEDSLHYWKERFEKFDVKHSEMTTYANRPALQFEDAEG 148

Query: 187 NALEFTQVD 195
             L     +
Sbjct: 149 LRLVLLVSN 157

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10 Length = 338

 Score = 43.9 bits (103), Expect = 1e-05
 Identities = 15/123 (12%), Positives = 40/123 (32%), Gaps = 13/123 (10%)

Query: 76  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPL 135
           +  V +    L++       I G          +      +  +  E    + +   D  
Sbjct: 181 MGSVELTVRRLDKMASTLTEIFGY-----TEVSRNDQEAIFQSIKGEAFGEIVVKYLDGP 235

Query: 136 SGRPEHGGRDRHTCIAIRDVSKL---KMILDKAGISYTLSKSGR---PAIFTRDPDANAL 189
           + +P  G    H  I +++ ++L   +  + + G   +     R    +++ R+ +    
Sbjct: 236 TEKPGRGS-IHHLAIRVKNDAELAYWEEQVKQRGFHSS-GIIDRFYFKSLYFRESNGILF 293

Query: 190 EFT 192
           E  
Sbjct: 294 EIA 296

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans} Length = 141

 Score = 57.6 bits (139), Expect = 4e-11
 Identities = 25/130 (19%), Positives = 38/130 (29%), Gaps = 13/130 (10%)

Query: 75  SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLP-YRGAWLWVG---AEMIHLMELP 130
            + +V I   ++     FYQ + G +  E+               +G    E   LM+L 
Sbjct: 8   DLSYVNIFTRDIVAMSAFYQQVFGFQEIESIRSPIFRGLDTGKSCIGFNAHEAYELMQLA 67

Query: 131 NPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGIS-----YTLSKSGRPAIFTRDPD 185
                SG                 V KL  +   AG +     Y        A+   DP+
Sbjct: 68  QFSETSGIKFLLN---FDVDTKEAVDKLVPVAIAAGATLIKAPYETYYHWYQAVL-LDPE 123

Query: 186 ANALEFTQVD 195
            N      V 
Sbjct: 124 RNVFRINNVL 133

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str} Length = 141

 Score = 57.2 bits (138), Expect = 5e-11
 Identities = 23/121 (19%), Positives = 42/121 (34%), Gaps = 8/121 (6%)

Query: 77  HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLS 136
            +      ++ RS  FY++ LGL+I E      L   G  +  G  +   +   + D   
Sbjct: 10  VNPIPFVRDINRSKSFYRDRLGLKILEDFGSFVLFETGFAIHEGRSLEETIWRTSSDA-- 67

Query: 137 GRPEHGGRDRHTCIAIRDVSKLKMILDKAGISY----TLSKSGRPAIFTRDPDANALEFT 192
            +  +G R+        DV      +    +           G+      DPD +A+E  
Sbjct: 68  -QEAYGRRNMLLYFEHADVDAAFQDI-APHVELIHPLERQAWGQRVFRFYDPDGHAIEVG 125

Query: 193 Q 193
           +
Sbjct: 126 E 126

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2 Length = 113

 Score = 56.6 bits (137), Expect = 5e-11
 Identities = 14/118 (11%), Positives = 33/118 (27%), Gaps = 16/118 (13%)

Query: 77  HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLS 136
            H+ +   ++  + EF +   GL  +            A+  +      ++ L     + 
Sbjct: 5   KHLNLTVADVVAAREFLEKYFGLTCSGT-------RGNAFAVMRDNDGFILTL-----MK 52

Query: 137 GRPEHGGRDRHTCIAIRDVSKLKMILDK---AGISYTLSKSGRP-AIFTRDPDANALE 190
           G+     +  H         ++  I  +    G      K       +   P    +E
Sbjct: 53  GKEVQYPKTFHVGFPQESEEQVDKINQRLKEDGFLVEPPKHAHAYTFYVEAPGGFTIE 110

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A* Length = 252

 Score = 58.9 bits (142), Expect = 6e-11
 Identities = 22/129 (17%), Positives = 39/129 (30%), Gaps = 25/129 (19%)

Query: 73  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 132
           + S+  + +    L+R L FY N+LG +    +           + +G   I        
Sbjct: 24  MTSIKQLTLYTAELDRMLAFYTNMLGAQHVHEQA------DAFTIQLGVSQIQFRA---- 73

Query: 133 DPLSGRPEHGGRDRHTCIAI--RDVSKLKMILDKAGISYTLSKSGRP--------AIFTR 182
              +          H  I I      + K  L   G   T +   +         + +  
Sbjct: 74  ---AADGTKPF--YHIAINIAANHFQEGKAWLSGFGELLTENDEDQAYFPFFNAYSCYVE 128

Query: 183 DPDANALEF 191
           DP  N +E 
Sbjct: 129 DPSGNIIEL 137

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100} Length = 128

 Score = 55.7 bits (134), Expect = 2e-10
 Identities = 26/128 (20%), Positives = 47/128 (36%), Gaps = 15/128 (11%)

Query: 74  VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPD 133
           + +  + I   +L+  L FY+ I+G +   A   DK                L  + NP 
Sbjct: 5   LLITSITINTSHLQGMLGFYR-IIGFQF-TASKVDKGSEVHR-AVHNGVEFSLYSIQNPQ 61

Query: 134 PLSGRPEHGGRDRHTCIAIRDVSK-LKMILDKAGISYTL----SKSGRPAIFTRDPDANA 188
                             I D+ K ++ ++   G    L       G+ AI   DPD ++
Sbjct: 62  R------SQIPSLQLGFQITDLEKTVQELVKIPGAMCILDPTDMPDGKKAIV-LDPDGHS 114

Query: 189 LEFTQVDG 196
           +E  +++G
Sbjct: 115 IELCELEG 122

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila} Length = 155

 Score = 55.5 bits (133), Expect = 3e-10
 Identities = 18/126 (14%), Positives = 37/126 (29%), Gaps = 8/126 (6%)

Query: 76  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPL 135
           +H   +  ++  ++  FY   LG  +    P     +         +   L+  P+    
Sbjct: 27  IHLTNVFVDDQAKAESFYTGKLGFLVKADVPVGADRWLTVVSPEAPDGTQLLLEPSSHAA 86

Query: 136 SG---RPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTL----SKSGRPAIFTRDPDANA 188
                             A+ D++     L   G+ +T           AI   D   N 
Sbjct: 87  VTPFKEALVADGIPAASFAVDDIAAEYERLSALGVRFTQEPTDMGPVVTAIL-DDTCGNL 145

Query: 189 LEFTQV 194
           ++  Q+
Sbjct: 146 IQLMQI 151

>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp} Length = 135

 Score = 54.4 bits (130), Expect = 6e-10
 Identities = 25/125 (20%), Positives = 41/125 (32%), Gaps = 16/125 (12%)

Query: 75  SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP 134
            V H+ I   +L+ + +FY   LG ++    P           +    + HL +  + + 
Sbjct: 9   DVFHLAIPARDLDEAYDFYVTKLGCKLARRYPD----RITLDFFGDQLVCHLSDRWDREV 64

Query: 135 LSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGR--------PAIFTRDPDA 186
                  G     T    +    L  +  + GI +    S R           F  DP  
Sbjct: 65  SMYPRHFG----ITFRDKKHFDNLYKLAKQRGIPFYHDLSRRFEGLIEEHETFFLIDPSN 120

Query: 187 NALEF 191
           N LEF
Sbjct: 121 NLLEF 125

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei} Length = 144

 Score = 52.9 bits (127), Expect = 2e-09
 Identities = 20/122 (16%), Positives = 41/122 (33%), Gaps = 19/122 (15%)

Query: 78  HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSG 137
              +   +L  +LEFY+ +L   +  A   +          +   ++          ++G
Sbjct: 9   LSRLYVADLNPALEFYEELLETPV--AMRFEIPQTGVELAQISTILL----------IAG 56

Query: 138 RPEHGGRDRHTCIAIR--DVSKLKMILDKAGISYTL----SKSGRPAIFTRDPDANALEF 191
             E     R+T        + K K  L++ G           +GR     R  D + +E+
Sbjct: 57  SEEALKPFRNTQATFLVDSLDKFKTFLEENGAEIIRGPSKVPTGRNMTV-RHSDGSVIEY 115

Query: 192 TQ 193
            +
Sbjct: 116 VE 117

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis} Length = 159

 Score = 52.2 bits (125), Expect = 5e-09
 Identities = 21/142 (14%), Positives = 45/142 (31%), Gaps = 20/142 (14%)

Query: 72  GVVSVHHVGILCENLERSLEFYQNILGLE-----INEARPHDKLPYRG---------AWL 117
            + +   +GI+  ++E SL+ Y    G+E       +        + G         A+ 
Sbjct: 16  DMRNTVQIGIVVRDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAKLAFF 75

Query: 118 WVGAEMIHLMELPNPD-PLSGRPEHGGRD-RHTCIAIRDVSKLKMILDKAGIS--YTLSK 173
            +G   + L+E            +  G    H    ++D+ +    L + G+        
Sbjct: 76  ELGPLQLELIEPDENPSTWREFLDKNGEGIHHIAFVVKDMDRKVEELYRKGMKVIQKGDF 135

Query: 174 SGRPAIF--TRDPDANALEFTQ 193
            G    +  T       +E  +
Sbjct: 136 EGGRYAYIDTLRALKVMIELLE 157

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi} Length = 150

 Score = 51.2 bits (122), Expect = 1e-08
 Identities = 21/125 (16%), Positives = 33/125 (26%), Gaps = 14/125 (11%)

Query: 75  SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP 134
            V  + +   +LE S  FY    G       P         +  +   ++    + N   
Sbjct: 5   QVAVITLGIGDLEASARFYGEGFGWAPVFRNPE------IIFYQMNGFVLATWLVQNLQE 58

Query: 135 LSGRPEHGGRDRHT----CIAIRDVSKLKMILDKAGISYTLSKSGRP----AIFTRDPDA 186
             G                 A  +V+ L   L  AG          P      +  DPD 
Sbjct: 59  DVGVAVTSRPGSMALAHNVRAETEVAPLMERLVAAGGQLLRPADAPPHGGLRGYVADPDG 118

Query: 187 NALEF 191
           +  E 
Sbjct: 119 HIWEI 123

>3fcd_A Lyase, ORF125EGC139; lactoylglutathione lyase, YECM, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.92A {Uncultured bacterium} Length = 134

 Score = 50.6 bits (121), Expect = 1e-08
 Identities = 23/121 (19%), Positives = 41/121 (33%), Gaps = 18/121 (14%)

Query: 81  ILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPE 140
           +   +++ +L  + + LG E+     +       A+L +    + L+E P          
Sbjct: 13  LHIPDMQEALTLFCDTLGFELKYRHSNY------AYLELSGCGLRLLEEPARKI----IP 62

Query: 141 HGGRDRHTCIAIRDV----SKLKMILDKAGISYTLSKSGRP----AIFTRDPDANALEFT 192
            G      CI + D+    +KL   L+             P        R PD + L FT
Sbjct: 63  DGIARVAICIDVSDIDSLHTKLSPALENLPADQVEPLKNMPYGQREFQVRMPDGDWLNFT 122

Query: 193 Q 193
            
Sbjct: 123 A 123

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2 Length = 118

 Score = 49.4 bits (118), Expect = 2e-08
 Identities = 18/121 (14%), Positives = 42/121 (34%), Gaps = 15/121 (12%)

Query: 78  HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSG 137
            + I+  N+ +     ++IL  + + A          A   +G+  + L +         
Sbjct: 8   QLDIIVSNVPQVCADLEHILDKKADYANDG------FAQFTIGSHCLMLSQNH-----LV 56

Query: 138 RPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP----AIFTRDPDANALEFTQ 193
             E+        I + DV +    L++ GI      +       ++  + P    L+F +
Sbjct: 57  PLENFQSGIIIHIEVEDVDQNYKRLNELGIKVLHGPTVTDWGTESLLVQGPAGLVLDFYR 116

Query: 194 V 194
           +
Sbjct: 117 M 117

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3 Length = 307

 Score = 51.0 bits (122), Expect = 4e-08
 Identities = 18/132 (13%), Positives = 40/132 (30%), Gaps = 24/132 (18%)

Query: 70  DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMEL 129
           + GV+   HV +   ++ ++LE Y  +LGL   +     ++  +                
Sbjct: 2   NKGVMRPGHVQLRVLDMSKALEHYVELLGLIEMDRDDQGRVYLKA--------------W 47

Query: 130 PNPDPLSGRPEHGGRDRHTCIAIR-----DVSKLKMILDKAGISYTLSKSG-----RPAI 179
              D  S             +  +      + +L+  L   G +     +G        +
Sbjct: 48  TEVDKFSLVLREADEPGMDFMGFKVVDEDALRQLERDLMAYGCAVEQLPAGELNSCGRRV 107

Query: 180 FTRDPDANALEF 191
             + P  +  E 
Sbjct: 108 RFQAPSGHHFEL 119

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3 Length = 307

 Score = 45.2 bits (107), Expect = 3e-06
 Identities = 18/132 (13%), Positives = 37/132 (28%), Gaps = 22/132 (16%)

Query: 72  GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPN 131
             V   H  +  + L  + + +  +LG  + E    +       +L +  +   +  + +
Sbjct: 147 AAVRFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTKAHDVAFIHH 206

Query: 132 PDPLSGRPEHGGRDRHTCIA---IRDVSKLKMILDKAG--ISYTLSKSGR----PAIFT- 181
           P+         GR  H         D+ +   ++      I        R          
Sbjct: 207 PEK--------GRLHHVSFHLETWEDLLRAADLISMTDTSIDIGP---TRHGLTHGKTIY 255

Query: 182 -RDPDANALEFT 192
             DP  N  E  
Sbjct: 256 FFDPSGNRNEVF 267

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens} Length = 144

 Score = 49.3 bits (117), Expect = 4e-08
 Identities = 17/126 (13%), Positives = 41/126 (32%), Gaps = 14/126 (11%)

Query: 77  HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLS 136
               +  +N   S +FY+ +LG++  E+ P         ++      + L      +P  
Sbjct: 27  DFTILYVDNPPASTQFYKALLGVDPVESSPT-----FSLFVLANGMKLGLWSRHTVEP-- 79

Query: 137 GRPEHGGRDRHTCIAIRDVSKLKMI---LDKAGISYTLSKSGRP---AIFTRDPDANALE 190
            +    G        + + +++         +G++     +           DPD++ L 
Sbjct: 80  -KASVTGGGGELAFRVENDAQVDETFAGWKASGVAMLQQPAKMEFGYTFTAADPDSHRLR 138

Query: 191 FTQVDG 196
                G
Sbjct: 139 VYAFAG 144

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1 Length = 144

 Score = 48.6 bits (116), Expect = 7e-08
 Identities = 27/115 (23%), Positives = 45/115 (39%), Gaps = 14/115 (12%)

Query: 78  HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE------MIHLMELPN 131
           H  I   +L+RS++FY   LG++    R  D    +   +++G        ++ L     
Sbjct: 11  HTMIRVGDLDRSIKFYTERLGMK--VLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYG 68

Query: 132 PDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTL-SKSGRPAIFTRDPD 185
                   +H     H  I + DV +L   + K  +      +SG  A F  DPD
Sbjct: 69  VTS----YKHDEAYGHIAIGVEDVKELVADMRKHDVPIDYEDESGFMA-FVVDPD 118

>3bt3_A Glyoxalase-related enzyme, ARAC type; VOC superfamily, PSI-2, NYSGXRC, structural genomics, prote structure initiative; 2.50A {Clostridium phytofermentans} Length = 148

 Score = 48.5 bits (115), Expect = 8e-08
 Identities = 20/145 (13%), Positives = 48/145 (33%), Gaps = 11/145 (7%)

Query: 57  ILKKEPIRDSDKIDYGVVSVHHVGIL-CENLERSLEFYQNILGLEINEARPHDKLPYRGA 115
           +  +  I+ S   + G V   +  +   +++++++++++ ILG   +     D+      
Sbjct: 2   LENERLIKMSRFSERGYVVRENGPVYFTKDMDKTVKWFEEILGWSGDIVARDDEGFGDYG 61

Query: 116 WLWVGA---EMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLS 172
            ++       + HL          G P  G       + I  +  L   + + G      
Sbjct: 62  CVFDYPSEVAVAHLTPFRGFHLFKGEPIKGV---AGFMMIEGIDALHKYVKENGWDQISD 118

Query: 173 KSGRP----AIFTRDPDANALEFTQ 193
              +P           D   L F +
Sbjct: 119 IYTQPWGARECSITTTDGCILRFFE 143

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* Length = 184

 Score = 48.5 bits (115), Expect = 1e-07
 Identities = 23/136 (16%), Positives = 46/136 (33%), Gaps = 27/136 (19%)

Query: 77  HHVGILCENLERSLEFYQNILGLEINEARPHDKLPY-------------------RGAWL 117
               +  ++ ++SL+FY  +LGL + +      + +                   + AW 
Sbjct: 33  QQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAWT 92

Query: 118 WVGAEMIHLMELPNPDPLSGRPEHGGRD-----RHTCIAIRDVSKLKMILDKAGISYT-L 171
           +     + L      +    +  H G        H  IA+ DV       ++ G+ +   
Sbjct: 93  FSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKK 152

Query: 172 SKSGRPAI--FTRDPD 185
              G+     F +DPD
Sbjct: 153 PDDGKMKGLAFIQDPD 168

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii} Length = 339

 Score = 49.2 bits (117), Expect = 2e-07
 Identities = 18/129 (13%), Positives = 39/129 (30%), Gaps = 23/129 (17%)

Query: 71  YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELP 130
           + +  +    +     + +L+F+   LG+ +   R    +  RG                
Sbjct: 7   FDIAHLARAELFSPKPQETLDFFTKFLGMYVTH-REGQSVYLRG--------------YE 51

Query: 131 NPDPLSGRPEHGGRDRHTCIAIR-----DVSKLKMILDKAGISYTLSKS---GRPAIFTR 182
           +P P S +            A+R      + +    L    +  T S+           +
Sbjct: 52  DPYPWSLKITEAPEAGMGHAAMRTSSPEALERRAKSLTDGNVDGTWSEDQFGYGKTFEYQ 111

Query: 183 DPDANALEF 191
            PD + L+ 
Sbjct: 112 SPDGHNLQL 120

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii} Length = 339

 Score = 44.2 bits (104), Expect = 8e-06
 Identities = 18/128 (14%), Positives = 38/128 (29%), Gaps = 15/128 (11%)

Query: 73  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 132
           V  + H+ ++  ++    + ++  LG    E R  D     GAW+        +  + + 
Sbjct: 151 VKRIDHLNLMSSDVTAVKDSFERHLGFRTTE-RVVDGNVEIGAWMSSNLLGHEVACMRDM 209

Query: 133 DPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAG--ISYTLSKSGR----PAIFT--RDP 184
               G+  H      T    +       +       I        +     + F    +P
Sbjct: 210 TGGHGKLHHLAFFYGT---GQHNIDAVEMFRDYDIQIEAGP---DKHGITQSQFLYVFEP 263

Query: 185 DANALEFT 192
             N +E  
Sbjct: 264 GGNRIELF 271

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila} Length = 148

 Score = 47.4 bits (112), Expect = 2e-07
 Identities = 20/118 (16%), Positives = 38/118 (32%), Gaps = 8/118 (6%)

Query: 77  HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLS 136
           + V    +N  +S EFY+N+L  +  E+ P         ++      + L      +P +
Sbjct: 8   NLVLFYVKNPAKSEEFYKNLLDTQPIESSPT-----FAMFVMKTGLRLGLWAQEEIEPKA 62

Query: 137 GRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP---AIFTRDPDANALEF 191
            +   G        +   V ++        IS     +           DPD + L  
Sbjct: 63  HQTGGGMELSFQVNSNEMVDEIHRQWSDKEISIIQPPTQMDFGYTFVGVDPDEHRLRI 120

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A Length = 135

 Score = 46.2 bits (110), Expect = 4e-07
 Identities = 26/119 (21%), Positives = 46/119 (38%), Gaps = 17/119 (14%)

Query: 78  HVGILCENLERSLEFYQNILGLEINEARPHD------KLPYRGAWLWVGAEMIHLMELPN 131
           H  +   +L+RS++FY  +LG++    R  +       L + G        +I L     
Sbjct: 5   HTMLRVGDLQRSIDFYTKVLGMK--LLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWG 62

Query: 132 PDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYT----LSKSGRPAI-FTRDPD 185
            D      E G    H  +++ + ++    + + G + T      K G   I F  DPD
Sbjct: 63  VDK----YELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPD 117

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A Length = 148

 Score = 46.2 bits (109), Expect = 6e-07
 Identities = 18/138 (13%), Positives = 40/138 (28%), Gaps = 17/138 (12%)

Query: 73  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV------GAEMIHL 126
            + + HV   C + + + ++YQ   G        + +       +            + +
Sbjct: 7   FICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQV 66

Query: 127 MELPNPD-PLSGRPEHGGRDR---HTCIAIRDVSKLKMILDKAGISY-----TLSKSGRP 177
           M   N +  ++             H    + D+  +   L + G+        L   G  
Sbjct: 67  MAPLNDESTVAKWLAKHNGRAGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGGNR 126

Query: 178 AIF--TRDPDANALEFTQ 193
             F   +      +E TQ
Sbjct: 127 INFMHPKSGKGVLIELTQ 144

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A Length = 323

 Score = 46.9 bits (111), Expect = 9e-07
 Identities = 23/129 (17%), Positives = 41/129 (31%), Gaps = 25/129 (19%)

Query: 73  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 132
           +V   ++ I+  +L +S EFY ++LGL + E    + +  R               L   
Sbjct: 15  IVRCAYMEIVVTDLAKSREFYVDVLGLHVTE-EDENTIYLRS--------------LEEF 59

Query: 133 DPLSGRPEHGGRDRHTCIAIR-----DVSKLKMILDKAGISYT-----LSKSGRPAIFTR 182
              +     G        A R     +V   +    + G          +K    ++   
Sbjct: 60  IHHNLVLRQGPIAAVAAFAYRVKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRVE 119

Query: 183 DPDANALEF 191
           DP     EF
Sbjct: 120 DPLGFPYEF 128

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2 Length = 119

 Score = 44.7 bits (106), Expect = 1e-06
 Identities = 20/124 (16%), Positives = 33/124 (26%), Gaps = 16/124 (12%)

Query: 74  VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPD 133
           V      I      R+  FY +ILG+ +  A  H              E    +      
Sbjct: 6   VRRVVANIATPEPARAQAFYGDILGMPV--AMDHG----WIVTHASPLEAHAQVSFAREG 59

Query: 134 PLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP----AIFTRDPDANAL 189
                   G       I + +  ++   + KAG+               +F RDP    +
Sbjct: 60  G------SGTDVPDLSIEVDNFDEVHARILKAGLPIEYGPVTEAWGVQRLFLRDPFGKLI 113

Query: 190 EFTQ 193
               
Sbjct: 114 NILS 117

>3eck_A Protein (homoprotocatechuate 2,3-dioxygenase); oxidoreductase, extradiol, FEII, crystal packing; HET: XXG; 1.60A {Brevibacterium fuscum} SCOP: d.32.1.3 d.32.1.3 PDB: 3ecj_A* 3ojn_A* 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* Length = 365

 Score = 46.2 bits (109), Expect = 2e-06
 Identities = 22/129 (17%), Positives = 41/129 (31%), Gaps = 25/129 (19%)

Query: 73  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 132
           ++   +  ++  +L +S  FY ++LGL ++     +++  R                   
Sbjct: 15  ILRCAYAELVVTDLAKSRNFYVDVLGLHVSY-EDENQIYLRSFE--------------EF 59

Query: 133 DPLSGRPEHGGRDRHTCIAIR-----DVSKLKMILDKAGISYTLSKSG-----RPAIFTR 182
              +     G       +A R     DV K +    + G      K G       A+   
Sbjct: 60  IHHNLVLTKGPVAALKAMAFRVRTPEDVDKAEAYYQELGCRTERRKDGFVKGIGDALRVE 119

Query: 183 DPDANALEF 191
           DP     EF
Sbjct: 120 DPLGFPYEF 128

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A* Length = 138

 Score = 44.4 bits (105), Expect = 2e-06
 Identities = 25/122 (20%), Positives = 45/122 (36%), Gaps = 9/122 (7%)

Query: 77  HHVGILCENLERSLEFYQNILGLEI---NEARPHDKLPYRGAWLWVGAEMIHLMELPNPD 133
               ++ E++ +SLEFY+  LG+EI    ++ PH +    G    +  + +  +   +P+
Sbjct: 6   SLFAVVVEDMAKSLEFYRK-LGVEIPAEADSAPHTEAVLDGGIR-LAWDTVETVRSYDPE 63

Query: 134 PLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP----AIFTRDPDANAL 189
             +    H             V K    L  AG    L              +DPD N +
Sbjct: 64  WQAPTGGHRFAIAFEFPDTASVDKKYAELVDAGYEGHLKPWNAVWGQRYAIVKDPDGNVV 123

Query: 190 EF 191
           + 
Sbjct: 124 DL 125

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A* Length = 309

 Score = 45.6 bits (108), Expect = 2e-06
 Identities = 21/130 (16%), Positives = 39/130 (30%), Gaps = 24/130 (18%)

Query: 72  GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPN 131
           GV+   H  +   NLE  + FY+N+LGL         ++ ++              +   
Sbjct: 5   GVLRPGHAQVRVLNLEEGIHFYRNVLGLVETGRDDQGRVYFKC------------WD--E 50

Query: 132 PDPLSGRPEHGGRDRHTCIAIR-----DVSKLKMILDKAGISYTLSKSGRP-----AIFT 181
            D                   +      + KL   L   G++ T   +G        +  
Sbjct: 51  RDHSCYIIREADTAGIDFFGFKVLDKATLEKLDADLQAYGLTTTRIPAGEMLETGERVRF 110

Query: 182 RDPDANALEF 191
             P  + +E 
Sbjct: 111 ELPSGHLIEL 120

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A* Length = 309

 Score = 40.2 bits (94), Expect = 2e-04
 Identities = 19/132 (14%), Positives = 36/132 (27%), Gaps = 23/132 (17%)

Query: 72  GVVSVHHVGILCENLERSLEFYQNILGLEINEA-RPHDKLPYRGAWLWVGAEMIHLMELP 130
             + + H  +   N+    + +  +LG  + E     D     G WL    ++  +  + 
Sbjct: 148 APIQLDHCLLYGPNIAEVQKIFTEVLGFYLVERVLSPDGDSDMGIWLSCSHKVHDIAFVE 207

Query: 131 NPDPLSGRPEHGGRDRHTCIA---IRDVSKLKMILDKAG--ISYTLSKSGR----PAIFT 181
            P+         G+  H          V +   I+      +        R         
Sbjct: 208 YPEK--------GKLHHCSFLLESWEQVLRAGDIMSMNEVNVDIGP---TRHGVTRGCTI 256

Query: 182 --RDPDANALEF 191
              DP  N  E 
Sbjct: 257 YAWDPSGNRFET 268

>1xrk_A Bleomycin resistance protein; arm exchange, ligand binding protein, thermostable mutant, antibiotic inhibitor; HET: BLM; 1.50A {Streptoalloteichus hindustanus} SCOP: d.32.1.2 PDB: 2zhp_A* 1byl_A Length = 124

 Score = 42.6 bits (100), Expect = 8e-06
 Identities = 15/122 (12%), Positives = 34/122 (27%), Gaps = 25/122 (20%)

Query: 83  CENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHG 142
             ++  ++EF+ + LG         D      A +      + +  + +           
Sbjct: 13  ARDVAEAVEFWTDRLGFSR--VFVEDDF----AGVVRDDVTLFISAVQDQVV-------- 58

Query: 143 GRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP-----------AIFTRDPDANALEF 191
             +    + +R + +L     +   +     SG                 RDP  N + F
Sbjct: 59  PDNTQAWVWVRGLDELYAEWSEVVSTNFRDASGPAMTEIVEQPWGREFALRDPAGNCVHF 118

Query: 192 TQ 193
             
Sbjct: 119 VA 120

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans} Length = 310

 Score = 43.3 bits (102), Expect = 1e-05
 Identities = 21/130 (16%), Positives = 39/130 (30%), Gaps = 24/130 (18%)

Query: 72  GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPN 131
            V  + +VG   ++ +    FY ++ GLE       +   ++                  
Sbjct: 5   RVTEIRYVGYGVKDFDAEKAFYADVWGLEPVG-EDANNAWFKAQG--------------A 49

Query: 132 PDPLSGRPEHGGRDRHTCIAIR-----DVSKLKMILDKAGISYTLSKSGRPAIFTRDPDA 186
            +    +      +R   IA+      DV  L+  ++ AG          PA+       
Sbjct: 50  DEHHVVQLRRADENRIDVIALAADSRSDVDALRASVEAAGCKVA----SEPAVLATPGGG 105

Query: 187 NALEFTQVDG 196
               F   DG
Sbjct: 106 YGFRFFSPDG 115

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A Length = 305

 Score = 42.7 bits (100), Expect = 3e-05
 Identities = 21/132 (15%), Positives = 42/132 (31%), Gaps = 28/132 (21%)

Query: 72  GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPN 131
            V  + ++G+   NL+   ++   I+G+++ +    D++ Y                   
Sbjct: 3   KVTELGYLGLSVSNLDAWRDYAAGIMGMQVVDDGEDDRI-YLRMD--------------- 46

Query: 132 PDPLSGRPEHGGRDRHTCIAIR-----DVSKLKMILDKAGISYTLSKSG-------RPAI 179
                      G D    I  R     ++ +L   L  AGI + ++             +
Sbjct: 47  RWHHRIVLHADGSDDLAYIGWRVAGPVELDELAEQLKNAGIPFEVASDADAAERRVLGLV 106

Query: 180 FTRDPDANALEF 191
              DP  N  E 
Sbjct: 107 KLHDPGGNPTEI 118

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP} Length = 137

 Score = 40.6 bits (95), Expect = 6e-05
 Identities = 23/120 (19%), Positives = 45/120 (37%), Gaps = 9/120 (7%)

Query: 79  VGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGR 138
           V +   + +R++++   + G  +   +P        A L  G  ++ +     P  +S  
Sbjct: 6   VELAYTDPDRAVDWLVRVFGFRLLLRQPAIGTIRH-ADLDTGGGIVMVRRTGEPYTVS-- 62

Query: 139 PEHGGRDRHTCIAIRDVSKLKMILDKAG--ISYTLSKS---GRPAIFTRDPDANALEFTQ 193
              G   +   + + DV +  M    AG  I   L       R  +  RD + +  EFT+
Sbjct: 63  CAGGHTCKQVIVWVSDVDEHFMRSTAAGADIVQPLQDKPWGLRQYLV-RDLEGHLWEFTR 121

>1qto_A Bleomycin-binding protein; arm-exchange, antibiotic inhibitor; 1.50A {Streptomyces verticillus} SCOP: d.32.1.2 PDB: 1jie_A* 1jif_A Length = 122

 Score = 39.8 bits (93), Expect = 6e-05
 Identities = 21/123 (17%), Positives = 42/123 (34%), Gaps = 27/123 (21%)

Query: 83  CENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHG 142
             ++  ++ F+ + LG E  +    D   +  A +  G   +H+    +        ++ 
Sbjct: 13  AVDVPANVSFWVDTLGFEK-DFGDRD---F--AGVRRGDIRLHISRTEHQIV----ADNT 62

Query: 143 GRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAI-----------FT-RDPDANALE 190
                  I + D   L     +A  +   + +  PA+           F  RDP  N + 
Sbjct: 63  S----AWIEVTDPDALHEEWARAVSTD-YADTSGPAMTPVGESPAGREFAVRDPAGNCVH 117

Query: 191 FTQ 193
           FT 
Sbjct: 118 FTA 120

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8 Length = 139

 Score = 40.3 bits (94), Expect = 7e-05
 Identities = 21/118 (17%), Positives = 33/118 (27%), Gaps = 9/118 (7%)

Query: 85  NLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGR 144
            L+  + FY+  L L+           Y G    +     HL E                
Sbjct: 21  QLDEIIRFYEEGLCLKR-IGEFSQHNGYDGVMFGLPHADYHL-EF-TQYEGGSTAPVPHP 77

Query: 145 DRHTCIAIRDVSKLKMI---LDKAGISYTLSKS---GRPAIFTRDPDANALEFTQVDG 196
           D      + +  +L  I   L   G     S++       +   DPD   + F    G
Sbjct: 78  DSLLVFYVPNAVELAAITSKLKHMGYQEVESENPYWSNGGVTIEDPDGWRIVFMNSKG 135

>1ecs_A Bleomycin resistance protein; arm-exchange, antibiotic inhibitor; HET: PG4; 1.70A {Klebsiella pneumoniae} SCOP: d.32.1.2 PDB: 1ewj_A* 1niq_B* 1mh6_A Length = 126

 Score = 39.9 bits (93), Expect = 7e-05
 Identities = 24/126 (19%), Positives = 39/126 (30%), Gaps = 29/126 (23%)

Query: 83  CENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV--GAEMIHLMELPNPDPLSGRPE 140
             + + +  FY+  LG  I              W+ +  G  M+     P  DPL+    
Sbjct: 11  SRDFDSTAAFYER-LGFGIVFRDAG--------WMILQRGDLMLEFFAHPGLDPLASWFS 61

Query: 141 HGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGR----------PAIFT-RDPDANAL 189
                   C+ + D+++        GI  T S   R            +    DPD   L
Sbjct: 62  -------CCLRLDDLAEFYRQCKSVGIQETSSGYPRIHAPELQGWGGTMAALVDPDGTLL 114

Query: 190 EFTQVD 195
              Q +
Sbjct: 115 RLIQNE 120

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A Length = 302

 Score = 41.1 bits (96), Expect = 8e-05
 Identities = 22/132 (16%), Positives = 41/132 (31%), Gaps = 28/132 (21%)

Query: 72  GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPN 131
            V+ + ++GI  ++ +    F  ++LGL++ +    D+   R                 +
Sbjct: 6   AVIELGYMGISVKDPDAWKSFATDMLGLQVLDEGEKDRFYLRM----------------D 49

Query: 132 PDPLSGRPEHGGRDRHTCIAIR-----DVSKLKMILDKAGISYTLSKS-------GRPAI 179
                    H G+D    +  R     +   L   L  AG    +              +
Sbjct: 50  YWHHRIVVHHNGQDDLEYLGWRVAGKPEFEALGQKLIDAGYKIRICDKVEAQERMVLGLM 109

Query: 180 FTRDPDANALEF 191
            T DP  N  E 
Sbjct: 110 KTEDPGGNPTEI 121

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A* Length = 132

 Score = 40.0 bits (93), Expect = 8e-05
 Identities = 18/132 (13%), Positives = 39/132 (29%), Gaps = 19/132 (14%)

Query: 73  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 132
            ++ +   +   N+ERS +FY+ I   E     P      R        + +  +     
Sbjct: 11  TITPNLQLVYVSNVERSTDFYRFIFKKEPVFVTP------RYVAFPSSGDALFAIWSGGE 64

Query: 133 DPLSGRPEHGGRDRHTCIAIRDVSKLKMILDK------AGISYTLSKSGRP---AIFTRD 183
           +P++  P          I +     +  + ++        I                  D
Sbjct: 65  EPVAEIPRFS----EIGIMLPTGEDVDKLFNEWTKQKSHQIIVIKEPYTDVFGRTFLISD 120

Query: 184 PDANALEFTQVD 195
           PD + +    +D
Sbjct: 121 PDGHIIRVCPLD 132

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B* Length = 292

 Score = 40.8 bits (95), Expect = 1e-04
 Identities = 17/131 (12%), Positives = 37/131 (28%), Gaps = 29/131 (22%)

Query: 73  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 132
           +  + ++G   +++     F    +GL        D   YR                 + 
Sbjct: 2   IERLGYLGFAVKDVPAWDHFLTKSVGLMAAG-SAGDAALYRA----------------DQ 44

Query: 133 DPLSGRPEHGGRDRHTCIAIR-----DVSKLKMILDKAGISYTLSKS-------GRPAIF 180
                  + G  D      +       + ++   L +AG+++T               + 
Sbjct: 45  RAWRIAVQPGELDDLAYAGLEVDDAAALERMADKLRQAGVAFTRGDEALMQQRKVMGLLC 104

Query: 181 TRDPDANALEF 191
            +DP    LE 
Sbjct: 105 LQDPFGLPLEI 115

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A* Length = 300

 Score = 40.3 bits (94), Expect = 2e-04
 Identities = 24/135 (17%), Positives = 44/135 (32%), Gaps = 19/135 (14%)

Query: 72  GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPN 131
           G   + HV +   +   +L FY+++LG  + ++                A +       N
Sbjct: 139 GEQGMGHVVLSTRDDAEALHFYRDVLGFRLRDSMRLPPQMVGRPADGPPAWLRFFGC--N 196

Query: 132 PDPLS---GRPEHGGRDRHTCIAIRDVSKLKMILDKAG-----ISYTLSKSGR----PAI 179
           P   S             H  + +     + + LD+A      +S TL   GR      +
Sbjct: 197 PRHHSLAFLPMPTSSGIVHLMVEVEQADDVGLCLDRALRRKVPMSATL---GRHVNDLML 253

Query: 180 FT--RDPDANALEFT 192
               + P    +EF 
Sbjct: 254 SFYMKTPGGFDIEFG 268

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A* Length = 300

 Score = 40.0 bits (93), Expect = 2e-04
 Identities = 21/132 (15%), Positives = 39/132 (29%), Gaps = 28/132 (21%)

Query: 72  GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPN 131
            + S+ ++ I   ++    E+   +LG+   +  P   L  R          + +     
Sbjct: 2   SIRSLGYLRIEATDMAAWREYGLKVLGMVEGKGAPEGALYLRM---DDFPARLVV----- 53

Query: 132 PDPLSGRPEHGGRDRHTCIAIR-----DVSKLKMILDKAGISYTLSKSG-------RPAI 179
                     G  DR             + +++  LD  G  Y  + +           I
Sbjct: 54  --------VPGEHDRLLEAGWECANAEGLQEIRNRLDLEGTPYKEATAAELADRRVDEMI 105

Query: 180 FTRDPDANALEF 191
              DP  N LE 
Sbjct: 106 RFADPSGNCLEV 117

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A* Length = 297

 Score = 38.3 bits (89), Expect = 7e-04
 Identities = 21/131 (16%), Positives = 38/131 (29%), Gaps = 29/131 (22%)

Query: 73  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 132
           + S+ ++G    ++     F    LGL        +   +R       A  I +      
Sbjct: 2   IRSLGYMGFAVSDVAAWRSFLTQKLGLMEAG-TTDNGDLFRI---DSRAWRIAV------ 51

Query: 133 DPLSGRPEHGGRDRHTCIAIR-----DVSKLKMILDKAGISYTLSKS-------GRPAIF 180
                  + G  D              ++++   L +AGI+ T   +           I 
Sbjct: 52  -------QQGEVDDLAFAGYEVADAAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLIT 104

Query: 181 TRDPDANALEF 191
             DP    LE 
Sbjct: 105 FADPFGLPLEI 115

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	196
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	99.91
2p25_A	126	Glyoxalase family protein; structural genomics, MC	99.88
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	99.88
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	99.88
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	99.87
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	99.86
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	99.86
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	99.86
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	99.86
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	99.86
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	99.86
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	99.85
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	99.85
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	99.85
3huh_A	152	Virulence protein STM3117; structural genomics, ny	99.85
3ghj_A	141	Putative integron gene cassette protein; integron	99.85
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	99.84
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	99.84
3vw9_A	187	Lactoylglutathione lyase; glyoxalase, lyase-lyase	99.83
1nki_A	135	Probable fosfomycin resistance protein; potassium	99.83
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	99.83
4hc5_A	133	Glyoxalase/bleomycin resistance protein/dioxygena;	99.82
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	99.82
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	99.82
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	99.82
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	99.82
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	99.82
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	99.82
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	99.81
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	99.8
2i7r_A	118	Conserved domain protein; structural genomics cons	99.8
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	99.8
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	99.79
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	99.79
3rri_A	135	Glyoxalase/bleomycin resistance protein/dioxygena;	99.79
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	99.79
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	99.79
4gym_A	149	Glyoxalase/bleomycin resistance protein/dioxygena;	99.79
3m2o_A	164	Glyoxalase/bleomycin resistance protein; unknown f	99.78
1xrk_A	124	Bleomycin resistance protein; arm exchange, ligand	99.78
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	99.78
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	99.77
3fcd_A	134	Lyase, ORF125EGC139; lactoylglutathione lyase, YEC	99.77
2r6u_A	148	Uncharacterized protein; structural genomics, PSI-	99.77
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	99.77
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	99.77
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	99.76
1ecs_A	126	Bleomycin resistance protein; arm-exchange, antibi	99.75
1qto_A	122	Bleomycin-binding protein; arm-exchange, antibioti	99.74
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	99.74
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	99.74
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	99.73
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	99.71
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	99.69
3bt3_A	148	Glyoxalase-related enzyme, ARAC type; VOC superfam	99.69
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	99.68
3zi1_A	330	Glyoxalase domain-containing protein 4; isomerase;	99.68
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	99.67
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	99.67
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	99.67
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	99.67
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	99.66
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	99.66
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	99.66
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	99.65
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	99.65
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	99.64
4ghg_A	365	Homoprotocatechuate 2,3-dioxygenase; oxygen activa	99.64
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	99.64
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	99.64
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	99.63
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	99.63
3zi1_A	330	Glyoxalase domain-containing protein 4; isomerase;	99.63
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	99.62
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	99.62
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	99.62
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	99.61
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	99.6
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	99.6
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	99.59
2r5v_A	357	PCZA361.1; dioxygenase, non-heme iron, vancomycin,	99.59
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	99.59
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	99.59
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	99.58
1xy7_A	166	Unknown protein; structural genomics, protein stru	99.56
1t47_A	381	4-hydroxyphenylpyruvate dioxygenase; triketone inh	99.54
2zw5_A	301	Bleomycin acetyltransferase; dimer, two domains; H	99.52
4ghg_A	365	Homoprotocatechuate 2,3-dioxygenase; oxygen activa	99.51
1sqd_A	424	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.49
2r5v_A	357	PCZA361.1; dioxygenase, non-heme iron, vancomycin,	99.49
1u6l_A	149	Hypothetical protein; structural genomics, PSI, pr	99.44
1u7i_A	136	Hypothetical protein; structural genomics, PA1358,	99.41
1t47_A	381	4-hydroxyphenylpyruvate dioxygenase; triketone inh	99.39
1sp8_A	418	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.38
1cjx_A	357	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.35
1tsj_A	139	Conserved hypothetical protein; structural genomic	99.34
1cjx_A	357	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.34
3isq_A	393	4-hydroxyphenylpyruvate dioxygenase; tyrosine meta	99.33
3l20_A	172	Putative uncharacterized protein; hypothetical pro	99.29
1sqd_A	424	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.25
1sp8_A	418	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.23
3oms_A	138	PHNB protein; structural genomics, PSI-2, protein	99.17
3e0r_A	244	C3-degrading proteinase (CPPA protein); MCSG, PSI,	99.12
3isq_A	393	4-hydroxyphenylpyruvate dioxygenase; tyrosine meta	99.09
1u69_A	163	Hypothetical protein; structural genomics, MSCG, p	98.4
3p8a_A	274	Uncharacterized protein; mainly antiparallel beta	98.09
3opy_B	941	6-phosphofructo-1-kinase beta-subunit; ATP binding	97.98
3e0r_A	244	C3-degrading proteinase (CPPA protein); MCSG, PSI,	96.98
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	96.34
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	93.61
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	92.25
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	91.97
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	91.43
3opy_A	989	6-phosphofructo-1-kinase alpha-subunit; ATP bindin	91.07
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	91.05
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	90.99
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	90.71
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	90.51
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	90.38
3ghj_A	141	Putative integron gene cassette protein; integron	89.99
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	89.7
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	89.17
2p25_A	126	Glyoxalase family protein; structural genomics, MC	88.42
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	87.87
3vw9_A	187	Lactoylglutathione lyase; glyoxalase, lyase-lyase	87.86
4hc5_A	133	Glyoxalase/bleomycin resistance protein/dioxygena;	87.4
3huh_A	152	Virulence protein STM3117; structural genomics, ny	86.12
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	85.97
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	85.7
3p8a_A	274	Uncharacterized protein; mainly antiparallel beta	85.6
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	85.46
1k4n_A	192	Protein EC4020, protein YECM; structural genomics,	84.84
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	84.44
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	84.21
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	84.19
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	83.87
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	82.17
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	82.11
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	81.38
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	81.18
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	80.65

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans}

Probab=99.91  E-value=3e-23  Score=149.34  Aligned_cols=123  Identities=25%  Similarity=0.329  Sum_probs=98.6

Q ss_pred             ceeceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCeEEEEEe-------cCCCCCCCCCCCCCC
Q 029285           71 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLME-------LPNPDPLSGRPEHGG  143 (196)
Q Consensus        71 ~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~l~l~~-------~~~~~~~~~~p~~~~  143 (196)
                      |++++++||+|.|+|++++++||+++|||++..+.+........+++..++..++|+.       .+........+..+.
T Consensus         1 M~i~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~   80 (134)
T 3l7t_A            1 MKLKAVHHVALIVSDYDKSYEFYVNQLGFEVIRENHRPKRHDYKLDLKCGDIELEIFGNKLTDSNYCAPPERISWPREAC   80 (134)
T ss_dssp             -CCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEETTTTEEEEEEEETTEEEEEEECCTTSTTCCCCCCCCCSSSCCS
T ss_pred             CceeeEeEEEEEeCCHHHHHHHHHHhcCCEEEEEeecCCCcceEEEEecCCeEEEEEecccccccccCCccccCCCCCCC
Confidence            4578999999999999999999999999999876554444445678888999999998       333222222333556


Q ss_pred             CceEEEEEECCHHHHHHHHHHCCCeEEee----CCCceEEEEEcCCCCeEEEEe
Q 029285          144 RDRHTCIAIRDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQ  193 (196)
Q Consensus       144 ~~~hi~f~v~dl~~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdG~~iEl~e  193 (196)
                      +..|++|.|+|+++++++|+++|+++...    ..|.+.++++|||||.|||+|
T Consensus        81 g~~~~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~e  134 (134)
T 3l7t_A           81 GLRHLAFYVEDVEASRQELIALGIRVEEVRYDDYTGKKMAFFFDPDGLPLELHE  134 (134)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHTCCCCCCEECTTSCCEEEEEECTTCCEEEEEC
T ss_pred             CeEEEEEEECCHHHHHHHHHhCCCcccceeccCCCceEEEEEECCCCCEEEEeC
Confidence            78899999999999999999999988543    346789999999999999986

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis}

Probab=99.88  E-value=7.2e-22  Score=140.98  Aligned_cols=122  Identities=20%  Similarity=0.253  Sum_probs=93.6

Q ss_pred             ceeceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEE
Q 029285           71 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI  150 (196)
Q Consensus        71 ~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~p~~~~~~~hi~f  150 (196)
                      |++.+++|+.|.|+|++++++||+++|||++..+..........+++..++..++|+........+.. ..+.+..|++|
T Consensus         1 M~~~~i~hi~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~-~~~~g~~~~~~   79 (126)
T 2p25_A            1 MFFKEIHHVAINASNYQATKNFYVEKLGFEVLRENHRPEKNDIKLDLKLGSQELEIFISDQFPARPSY-PEALGLRHLAF   79 (126)
T ss_dssp             CTTSCCCCEEEEESCHHHHHHHHTTTTCCEEEEEEEEGGGTEEEEEEEETTEEEEEEECTTCCCCCCS-SCCSSCCCEEE
T ss_pred             CcccccceEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCcceEEEEecCCeEEEEEeccCCCCCCCC-CCCccceEEEE
Confidence            45678999999999999999999999999988643221222234668888878888876543222111 23446679999


Q ss_pred             EECCHHHHHHHHHHCCCeEEee----CCCceEEEEEcCCCCeEEEEe
Q 029285          151 AIRDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQ  193 (196)
Q Consensus       151 ~v~dl~~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdG~~iEl~e  193 (196)
                      .|+|+++++++|+++|+++...    ..|.+.+|++|||||.|||.|
T Consensus        80 ~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~e  126 (126)
T 2p25_A           80 KVEHIEEVIAFLNEQGIETEPLRVDDFTGKKMTFFFDPDGLPLELHE  126 (126)
T ss_dssp             ECSCHHHHHHHHHHTTCCCCCCEECTTTCCEEEEEECTTCCEEEEEC
T ss_pred             EeCCHHHHHHHHHHcCCccccccccCCCCcEEEEEECCCCCEEEeeC
Confidence            9999999999999999987543    245688999999999999986

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}

Probab=99.88  E-value=2.7e-21  Score=143.02  Aligned_cols=130  Identities=18%  Similarity=0.201  Sum_probs=98.6

Q ss_pred             CCCCCceeceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCC------CCceeEEEEeCC-eEEEEEecCCCCCCCCC
Q 029285           66 SDKIDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDK------LPYRGAWLWVGA-EMIHLMELPNPDPLSGR  138 (196)
Q Consensus        66 ~~~~~~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~------~~~~~~~l~~g~-~~l~l~~~~~~~~~~~~  138 (196)
                      ....++++.+++||+|.|.|++++++||+++|||++........      .....+|+..++ ..++|+......+....
T Consensus        10 ~~~~~~~~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~   89 (156)
T 3kol_A           10 SVLAPGNLRKVHHIALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASGKVANFITPDGTILDLFGEPELSPPDPN   89 (156)
T ss_dssp             CCCCTTSSCCCCEEEEEESCHHHHHHHHTTTSCCEECCTTTSCTTTHHHHHTTSEEEEECTTSCEEEEEECTTCCCSSSS
T ss_pred             cccCccccceEeEEEEEeCCHHHHHHHHHhhcCCEEEeecccCcchhcccCCCcEEEEEeCCCCEEEEEecCCCCcCCCC
Confidence            33456678999999999999999999999999999986322111      112347788765 78899887654322111


Q ss_pred             -CCCCCCceEEEEEEC--CHHHHHHHHHHCCCeEEeeC---CCceEEEEEcCCCCeEEEEeec
Q 029285          139 -PEHGGRDRHTCIAIR--DVSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQVD  195 (196)
Q Consensus       139 -p~~~~~~~hi~f~v~--dl~~~~~~l~~~G~~~~~~~---~g~~~~~~~DPdG~~iEl~e~~  195 (196)
                       .....+..|++|.|+  |+++++++|+++|+++...+   ..++.+||+|||||.|||.+.+
T Consensus        90 ~~~~~~~~~h~~~~v~~~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~DPdG~~iel~~~~  152 (156)
T 3kol_A           90 PEKTFTRAYHLAFDIDPQLFDRAVTVIGENKIAIAHGPVTRPTGRGVYFYDPDGFMIEIRCDP  152 (156)
T ss_dssp             TTCCCSSCCEEEEECCGGGHHHHHHHHHHTTCCEEEEEEEC-CCEEEEEECTTSCEEEEEECC
T ss_pred             CCCCCCceEEEEEEecHHHHHHHHHHHHHCCCccccCceecCCccEEEEECCCCCEEEEEecC
Confidence             223456789999999  99999999999999986442   3457999999999999999875

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A

Probab=99.88  E-value=5.6e-22  Score=143.68  Aligned_cols=120  Identities=18%  Similarity=0.282  Sum_probs=94.8

Q ss_pred             eceeeEEEEEcCCHHHHHHHHHhccCCEEeeec-CCCCCCceeEEEEeCCeEEEEEecCCCCCCCCC-CCCCCCceEEEE
Q 029285           73 VVSVHHVGILCENLERSLEFYQNILGLEINEAR-PHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGR-PEHGGRDRHTCI  150 (196)
Q Consensus        73 i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~-~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~-p~~~~~~~hi~f  150 (196)
                      +++++||+|.|+|+++|++||+ +|||++..+. ..+......+|+..++..++|+........... ...+.+.+|++|
T Consensus         5 ~~~i~hv~i~v~Dl~~a~~FY~-~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~g~~hiaf   83 (133)
T 3hdp_A            5 SLKVHHIGYAVKNIDSALKKFK-RLGYVEESEVVRDEVRKVYIQFVINGGYRVELVAPDGEDSPINKTIKKGSTPYHICY   83 (133)
T ss_dssp             CCCEEEEEEECSCHHHHHHHHH-HTTCEECSCCEEETTTTEEEEEEEETTEEEEEEEESSTTCTHHHHTTTSCEEEEEEE
T ss_pred             ceeeCEEEEEECCHHHHHHHHH-HcCCeeecceeccCCcceEEEEEeCCCEEEEEEecCCCCChHHHHHhcCCceEEEEE
Confidence            5789999999999999999999 9999987642 122334567888889999999986543221100 111567789999


Q ss_pred             EECCHHHHHHHHHHCCCeEEee------CCCceEEEEEcCCCCeEEEEe
Q 029285          151 AIRDVSKLKMILDKAGISYTLS------KSGRPAIFTRDPDANALEFTQ  193 (196)
Q Consensus       151 ~v~dl~~~~~~l~~~G~~~~~~------~~g~~~~~~~DPdG~~iEl~e  193 (196)
                      .|+|+++++++|+++|+++...      .+|.+.+|++|||||.|||+|
T Consensus        84 ~v~di~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~dPdG~~iEl~e  132 (133)
T 3hdp_A           84 EVEDIQKSIEEMSQIGYTLFKKAEIAPAIDNRKVAFLFSTDIGLIELLE  132 (133)
T ss_dssp             EESCHHHHHHHHTTTTEEEEEEEEEEGGGTTEEEEEEEETTTEEEEEEE
T ss_pred             EcCCHHHHHHHHHHcCCccccCCeecccCCCceEEEEECCCceEEEEec
Confidence            9999999999999999988643      256789999999999999998

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis}

Probab=99.87  E-value=2.9e-22  Score=150.02  Aligned_cols=132  Identities=17%  Similarity=0.201  Sum_probs=103.1

Q ss_pred             cCCCCCCceeceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCC--------------CCCceeEEEEeCCeEEEEEec
Q 029285           64 RDSDKIDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHD--------------KLPYRGAWLWVGAEMIHLMEL  129 (196)
Q Consensus        64 ~~~~~~~~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~--------------~~~~~~~~l~~g~~~l~l~~~  129 (196)
                      ..+...+..+.+++||+|.|+|++++++||+++|||++..+...+              ......+|+..++..++|++.
T Consensus         8 ~~~~~~~~~~~~i~Hv~i~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~leL~~~   87 (159)
T 3gm5_A            8 HSMSKNILDMRNTVQIGIVVRDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAKLAFFELGPLQLELIEP   87 (159)
T ss_dssp             -CCCSSCCCGGGCEEEEEECSCHHHHHHHHHHHTTCCCCCCEECCCHHHHCCEETTEECCCCEEEEEEEETTEEEEEEEE
T ss_pred             ccccccccccccccEEEEEeCCHHHHHHHHHHhhCCCCceEEecCCcccccceeecccccceEEEEEEecCCEEEEEEEE
Confidence            445566777899999999999999999999999999977543222              134567888899999999986


Q ss_pred             CCCCCCCCC--CCCCCCceEEEEEECCHHHHHHHHHHCCCeEEee--CCCceEEEEEcCC--CCeEEEEeec
Q 029285          130 PNPDPLSGR--PEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLS--KSGRPAIFTRDPD--ANALEFTQVD  195 (196)
Q Consensus       130 ~~~~~~~~~--p~~~~~~~hi~f~v~dl~~~~~~l~~~G~~~~~~--~~g~~~~~~~DPd--G~~iEl~e~~  195 (196)
                      .........  ...+.+++|+||.|+|+++++++|+++|+++...  ..|.+.+|++|||  |+.|||+|.+
T Consensus        88 ~~~~~~~~~~l~~~~~g~~Hiaf~v~di~~~~~~l~~~G~~~~~~~~~~g~~~~~~~dpd~~G~~iEl~e~~  159 (159)
T 3gm5_A           88 DENPSTWREFLDKNGEGIHHIAFVVKDMDRKVEELYRKGMKVIQKGDFEGGRYAYIDTLRALKVMIELLENY  159 (159)
T ss_dssp             CSSSCHHHHHHHHHCSEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEETTEEEEEESCHHHHSSEEEEEEEC
T ss_pred             CCCCChhHHHhhcCCceEEEEEEEcCCHHHHHHHHHHCCCcEeeccccCCeeEEEEeccccCcEEEEEEecC
Confidence            443210000  0135578899999999999999999999998654  3578999999999  9999999975

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A*

Probab=99.86  E-value=1.1e-20  Score=136.13  Aligned_cols=120  Identities=18%  Similarity=0.286  Sum_probs=95.6

Q ss_pred             CCceeceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEE
Q 029285           69 IDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHT  148 (196)
Q Consensus        69 ~~~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~p~~~~~~~hi  148 (196)
                      ..|.+.+++|+.|.|+|++++++||+++|||++....+      ..+++..++..+.|.......... .+....+..|+
T Consensus         4 ~~m~~~~i~hi~l~v~D~~~a~~FY~~~lG~~~~~~~~------~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~   76 (133)
T 3ey7_A            4 FLMKISHLDHLVLTVADIPTTTNFYEKVLGMKAVSFGA------GRIALEFGHQKINLHQLGNEFEPK-AQNVRVGSADL   76 (133)
T ss_dssp             CCCCCCEEEEEEEEESCHHHHHHHHHHHHCCEEEEETT------TEEEEEETTEEEEEEETTSCCSSC-CTTCCTTCCEE
T ss_pred             eEeEecccCEEEEEECCHHHHHHHHHHccCceEEEecC------CeEEEEcCCEEEEEEcCCCCcccc-CCCCCCCccEE
Confidence            34668899999999999999999999999999987532      246788899889998765442211 12234566899


Q ss_pred             EEEECC-HHHHHHHHHHCCCeEEeeC----C--C-ceEEEEEcCCCCeEEEEeec
Q 029285          149 CIAIRD-VSKLKMILDKAGISYTLSK----S--G-RPAIFTRDPDANALEFTQVD  195 (196)
Q Consensus       149 ~f~v~d-l~~~~~~l~~~G~~~~~~~----~--g-~~~~~~~DPdG~~iEl~e~~  195 (196)
                      +|.|+| +++++++|+++|+++...+    .  + .+.+|++|||||.|||.|++
T Consensus        77 ~~~v~dd~~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~~~  131 (133)
T 3ey7_A           77 CFITDTVLSDAMKHVEDQGVTIMEGPVKRTGAQGAITSFYFRDPDGNLIEVSTYS  131 (133)
T ss_dssp             EEECSSCHHHHHHHHHHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEEESC
T ss_pred             EEEeCcHHHHHHHHHHHCCCccccCCccccCCCCCeEEEEEECCCCCEEEEEecC
Confidence            999997 9999999999999875432    1  1 38899999999999999975

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} SCOP: d.32.1.0

Probab=99.86  E-value=2.1e-21  Score=139.61  Aligned_cols=122  Identities=26%  Similarity=0.427  Sum_probs=94.6

Q ss_pred             eceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCC---CCCCCCceEEE
Q 029285           73 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGR---PEHGGRDRHTC  149 (196)
Q Consensus        73 i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~---p~~~~~~~hi~  149 (196)
                      +.+++|++|.|+|++++++||+++|||++..+.+.+......+|+..++..++|+...........   ...+++..|++
T Consensus         3 ~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~~hi~   82 (134)
T 3rmu_A            3 LGRLNHVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVNLGNTKMELLHPLGLDSPIAGFLQKNKAGGMHHIC   82 (134)
T ss_dssp             EEEEEEEEEECSCHHHHHHHHHHTSCCEECCCEEEGGGTEEEEEEECSSSEEEEEEECSTTCTTHHHHHHCTTCEEEEEE
T ss_pred             cceeeeEEEEeCCHHHHHHHHHHhcCCEEeEeeecCCCCEEEEEEecCCEEEEEEecCCCCchhhhhhhccCCCCceEEE
Confidence            678999999999999999999999999988654433334567889889889999876543221100   01345778999


Q ss_pred             EEECCHHHHHHHHHHCCCeEEeeC-----CCceEEEE--EcCCCCeEEEEee
Q 029285          150 IAIRDVSKLKMILDKAGISYTLSK-----SGRPAIFT--RDPDANALEFTQV  194 (196)
Q Consensus       150 f~v~dl~~~~~~l~~~G~~~~~~~-----~g~~~~~~--~DPdG~~iEl~e~  194 (196)
                      |.|+|+++++++|+++|+++..++     .|.+.+|+  +|||||.|||.|.
T Consensus        83 ~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~e~  134 (134)
T 3rmu_A           83 IEVDNINAAVMDLKKKKIRSLSEEVKIGAHGKPVIFLHPKDCGGVLVELEQA  134 (134)
T ss_dssp             EEESCHHHHHHHHHHTTCTTBCCCCEECTTSSEEEEECSCSSCCSCEEEEEC
T ss_pred             EEcCCHHHHHHHHHHcCCcccCCCcccCCCCceEEEEecCCCCcEEEEEEcC
Confidence            999999999999999999875432     34556676  8999999999984

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1

Probab=99.86  E-value=1.4e-20  Score=138.65  Aligned_cols=121  Identities=21%  Similarity=0.278  Sum_probs=93.7

Q ss_pred             CceeceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCC----eEEEEEecCCCCCCCCCCCCCCCc
Q 029285           70 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA----EMIHLMELPNPDPLSGRPEHGGRD  145 (196)
Q Consensus        70 ~~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~----~~l~l~~~~~~~~~~~~p~~~~~~  145 (196)
                      .|.+.+++|+.|.|+|++++++||+++|||++..+.+.++..+..+|+..++    ..++|+.......    +..+.+.
T Consensus         3 ~m~~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~----~~~~~~~   78 (144)
T 2c21_A            3 HMPSRRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGVTS----YKHDEAY   78 (144)
T ss_dssp             ---CCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTTTSCEEEEEEETTCCC----CCCCSSE
T ss_pred             CCccceeEEEEEEeCCHHHHHHHHHhcCCCEEEEeeecCCCCeEEEEEEcCCCCCceEEEEEecCCCCC----CCCCCCc
Confidence            3567899999999999999999999999999987543222234557888764    5788887654221    1123567


Q ss_pred             eEEEEEECCHHHHHHHHHHCCCeEEeeCCCceEE-EEEcCCCCeEEEEeec
Q 029285          146 RHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAI-FTRDPDANALEFTQVD  195 (196)
Q Consensus       146 ~hi~f~v~dl~~~~~~l~~~G~~~~~~~~g~~~~-~~~DPdG~~iEl~e~~  195 (196)
                      .|++|.|+|+++++++|+++|+++... .|.+.+ ||+|||||.|||.+..
T Consensus        79 ~h~~f~v~d~~~~~~~l~~~G~~~~~~-~g~~~~~~~~DPdG~~iel~~~~  128 (144)
T 2c21_A           79 GHIAIGVEDVKELVADMRKHDVPIDYE-DESGFMAFVVDPDGYYIELLNEK  128 (144)
T ss_dssp             EEEEEEESCHHHHHHHHHHTTCCEEEE-CSSSSEEEEECTTSCEEEEEEHH
T ss_pred             eEEEEEeCCHHHHHHHHHHCCCEEecc-CCcEEEEEEECCCCCEEEEEEcC
Confidence            899999999999999999999998777 665555 9999999999999853

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str}

Probab=99.86  E-value=1.9e-20  Score=134.68  Aligned_cols=116  Identities=21%  Similarity=0.296  Sum_probs=93.2

Q ss_pred             ceeceeeEEEEEc--CCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEE
Q 029285           71 YGVVSVHHVGILC--ENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHT  148 (196)
Q Consensus        71 ~~i~~l~hv~l~v--~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~p~~~~~~~hi  148 (196)
                      |++.+++|+.|.|  +|++++++||+++|||++..+.+.. .....+|+..++..++|...+...        ..+..|+
T Consensus         6 m~~~~i~hv~l~v~~~D~~~a~~FY~~~lG~~~~~~~~~~-~~~~~~~~~~~~~~l~l~~~~~~~--------~~~~~~~   76 (126)
T 2qqz_A            6 NYIQGIDHVQVAAPVGCEEEARAFYGETIGMEEIPKPEEL-KKRGGCWFKCGNQEIHIGVEQNFN--------PAKRAHP   76 (126)
T ss_dssp             CCEEEEEEEEEEECTTTHHHHHHHHTTTTCCEEECCCGGG-GGGCCEEEEETTEEEEEEECTTCC--------CCSSSCE
T ss_pred             cccceeeeEEEEcccccHHHHHHHHHhcCCCEEecCcccc-cCCCceEEEeCCEEEEEEecCCCC--------CCCceEE
Confidence            4578999999999  8999999999999999988643210 011347888888888887642211        1356799


Q ss_pred             EEEECCHHHHHHHHHHCCCeEEeeC--CCceEEEEEcCCCCeEEEEeec
Q 029285          149 CIAIRDVSKLKMILDKAGISYTLSK--SGRPAIFTRDPDANALEFTQVD  195 (196)
Q Consensus       149 ~f~v~dl~~~~~~l~~~G~~~~~~~--~g~~~~~~~DPdG~~iEl~e~~  195 (196)
                      +|.|+|+++++++|+++|+++...+  +|.+.++++|||||.|||.+..
T Consensus        77 ~f~v~d~~~~~~~l~~~G~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  125 (126)
T 2qqz_A           77 AFYVLKIDEFKQELIKQGIEVIDDHARPDVIRFYVSDPFGNRIEFMENK  125 (126)
T ss_dssp             EEEETTHHHHHHHHHHTTCCCEEECSSTTEEEEEEECTTSCEEEEEEEC
T ss_pred             EEEcCCHHHHHHHHHHcCCCccCCCCCCCeeEEEEECCCCCEEEEEeCC
Confidence            9999999999999999999886654  4678999999999999999975

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila}

Probab=99.86  E-value=5e-22  Score=148.65  Aligned_cols=121  Identities=15%  Similarity=0.184  Sum_probs=83.4

Q ss_pred             eceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEe-CC-e-EEEEEecC-CCCCCCC-CCCCCCCceE
Q 029285           73 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GA-E-MIHLMELP-NPDPLSG-RPEHGGRDRH  147 (196)
Q Consensus        73 i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~-g~-~-~l~l~~~~-~~~~~~~-~p~~~~~~~h  147 (196)
                      .++++|+.|+|+|+++|++||+++|||++..+.+.+.  .+...+.. ++ . .+.+.... .+..... ....+.+..|
T Consensus        24 ~Mri~~v~I~V~Dle~A~~FY~dvLGf~v~~d~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~~~  101 (155)
T 4g6x_A           24 AMRIHLTNVFVDDQAKAESFYTGKLGFLVKADVPVGA--DRWLTVVSPEAPDGTQLLLEPSSHAAVTPFKEALVADGIPA  101 (155)
T ss_dssp             CCCCCEEEEEESCHHHHHHHHHHTTCCEEEEEEEETT--EEEEEEECTTCTTSCEEEEEECCSTTHHHHHHHHHHTTCCS
T ss_pred             ceEEEEEEEEeCCHHHHHHHHHHHhCCEEEEeecCCC--ceEEEEeccCCCcceEEEeccCCCccccccccccccCCceE
Confidence            3578999999999999999999999999876554332  12222222 22 1 22222221 1110000 0112346679


Q ss_pred             EEEEECCHHHHHHHHHHCCCeEEeeC---CCceEEEEEcCCCCeEEEEeec
Q 029285          148 TCIAIRDVSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQVD  195 (196)
Q Consensus       148 i~f~v~dl~~~~~~l~~~G~~~~~~~---~g~~~~~~~DPdG~~iEl~e~~  195 (196)
                      ++|.|+|+++++++|+++|+++..++   .+++.+||+|||||.|||+|..
T Consensus       102 l~f~VdDvda~~~~l~~~Gv~~~~~p~~~~~g~~~~f~DPdGn~iel~q~~  152 (155)
T 4g6x_A          102 ASFAVDDIAAEYERLSALGVRFTQEPTDMGPVVTAILDDTCGNLIQLMQIA  152 (155)
T ss_dssp             EEEEESCHHHHHHHHHHTTCCEEEEEEECSSCEEEEEECSSSCEEEEEEC-
T ss_pred             EEeeechhhhhhhHHhcCCcEEeeCCEEcCCeEEEEEECCCCCEEEEEEEC
Confidence            99999999999999999999986543   4568899999999999999964

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}

Probab=99.86  E-value=1e-20  Score=135.41  Aligned_cols=118  Identities=19%  Similarity=0.276  Sum_probs=91.8

Q ss_pred             ceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeC-CeEEEEEecCCCCCCCCCCCCCCCceEEEEEE
Q 029285           74 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-AEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  152 (196)
Q Consensus        74 ~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g-~~~l~l~~~~~~~~~~~~p~~~~~~~hi~f~v  152 (196)
                      ++++|+.|.|+|++++++||+++|||++..+...+...+...|+..+ +..++|+..+.....+  ...+.+..|++|.|
T Consensus         2 m~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~--~~~~~g~~hi~~~v   79 (127)
T 3e5d_A            2 MKIEHVALWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSFEDGARLEIMSRTDVTGKT--TGENLGWAHIAIST   79 (127)
T ss_dssp             CCCCEEEEECSSHHHHHHHHHHHHCCEECCCEEEGGGTEEEEEEECSSSCEEEEEEETTCCCCC--CSSCSSCCCEEEEC
T ss_pred             CEEEEEEEEECCHHHHHHHHHHhcCCeeecccccCCCCccEEEEEcCCCcEEEEEecCCCCCCC--CcCCCceEEEEEEc
Confidence            46899999999999999999999999998753332333456777764 5688888766443221  11345678999999


Q ss_pred             CC---HHHHHHHHHHCCCeEEeeC----CCceEEEEEcCCCCeEEEEe
Q 029285          153 RD---VSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQ  193 (196)
Q Consensus       153 ~d---l~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~iEl~e  193 (196)
                      +|   +++++++|+++|+++...+    +|.+.++++|||||.|||+.
T Consensus        80 ~d~~~v~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~  127 (127)
T 3e5d_A           80 GTKEAVDELTEKLRQDGFAIAGEPRMTGDGYYESVVLDPEGNRIEITW  127 (127)
T ss_dssp             SSHHHHHHHHHHHHHTTCCEEEEEEECTTSCEEEEEECTTSCEEEEEC
T ss_pred             CCHHHHHHHHHHHHHcCCeEecCcccCCCCcEEEEEECCCCCEEEEeC
Confidence            98   8899999999999986542    45688999999999999963

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A

Probab=99.85  E-value=4.7e-20  Score=133.33  Aligned_cols=118  Identities=21%  Similarity=0.345  Sum_probs=91.1

Q ss_pred             ceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCC----eEEEEEecCCCCCCCCCCCCCCCceEEE
Q 029285           74 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA----EMIHLMELPNPDPLSGRPEHGGRDRHTC  149 (196)
Q Consensus        74 ~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~----~~l~l~~~~~~~~~~~~p~~~~~~~hi~  149 (196)
                      ++++|+.|.|.|++++++||+++|||++....+.+...+..+|+..++    ..++|........    ...+.+..|++
T Consensus         1 m~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~----~~~~~~~~~~~   76 (135)
T 1f9z_A            1 MRLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDK----YELGTAYGHIA   76 (135)
T ss_dssp             CCEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESSCTTTSCEEEEEEETTCCC----CCCCSSEEEEE
T ss_pred             CcceEEEEEeCCHHHHHHHHHhccCcEEEEecccCCCceEEEEEecCCCCCCcEEEEEEcCCCCc----ccCCCCccEEE
Confidence            468999999999999999999999999987654333344567787764    5788875433211    11234677999


Q ss_pred             EEECCHHHHHHHHHHCCCeEEeeC----CCc-eEEEEEcCCCCeEEEEeec
Q 029285          150 IAIRDVSKLKMILDKAGISYTLSK----SGR-PAIFTRDPDANALEFTQVD  195 (196)
Q Consensus       150 f~v~dl~~~~~~l~~~G~~~~~~~----~g~-~~~~~~DPdG~~iEl~e~~  195 (196)
                      |.|+|+++++++|+++|+++..++    .|. +.++++|||||.|||.+..
T Consensus        77 ~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~~~  127 (135)
T 1f9z_A           77 LSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEK  127 (135)
T ss_dssp             EECSCHHHHHHHHHHTTCEEEEEEEECTTSCCEEEEEECTTSCEEEEEEC-
T ss_pred             EEeCCHHHHHHHHHHCCCEEecCCccCCCCceeEEEEECCCCCEEEEEecC
Confidence            999999999999999999986542    343 6789999999999999864

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP}

Probab=99.85  E-value=6.1e-21  Score=139.12  Aligned_cols=124  Identities=23%  Similarity=0.188  Sum_probs=93.5

Q ss_pred             ceeceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEE
Q 029285           71 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI  150 (196)
Q Consensus        71 ~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~p~~~~~~~hi~f  150 (196)
                      |++.+++|+.|.|+|++++++||+++|||++..+.+.....+..+++. ++..++|.......... ......+..|++|
T Consensus         1 M~i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~-~~~~l~l~~~~~~~~~~-~~~~~~g~~h~~f   78 (136)
T 2rk0_A            1 MSLSGVSHVSLTVRDLDISCRWYTEILDWKELVRGRGDTTSFAHGVLP-GGLSIVLREHDGGGTDL-FDETRPGLDHLSF   78 (136)
T ss_dssp             -CEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEECSSEEEEEEECT-TSCEEEEEEETTCSSSC-CCTTSSEEEEEEE
T ss_pred             CCCCcccEEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCceEEEEEc-CCCEEEEEeCCCCcccC-CCCCCCCcceEEE
Confidence            457899999999999999999999999999987654332223345555 77788888765432111 1123346789999


Q ss_pred             EE---CCHHHHHHHHHHCCCeEEeeC--CCceEEEEEcCCCCeEEEEeecC
Q 029285          151 AI---RDVSKLKMILDKAGISYTLSK--SGRPAIFTRDPDANALEFTQVDG  196 (196)
Q Consensus       151 ~v---~dl~~~~~~l~~~G~~~~~~~--~g~~~~~~~DPdG~~iEl~e~~~  196 (196)
                      .|   +|+++++++|+++|+++....  ..++.+||+|||||.|||.+..+
T Consensus        79 ~v~~~~d~~~~~~~l~~~G~~~~~~~~~~~g~~~~~~DPdG~~iel~~~~~  129 (136)
T 2rk0_A           79 SVESMTDLDVLEERLAKAGAAFTPTQELPFGWILAFRDADNIALEAMLGRE  129 (136)
T ss_dssp             EESSHHHHHHHHHHHHHHTCCBCCCEEETTEEEEEEECTTCCEEEEEEECT
T ss_pred             EeCCHHHHHHHHHHHHHCCCcccCccccCCceEEEEECCCCCEEEEEEcCC
Confidence            99   899999999999999875432  22488999999999999998753

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans}

Probab=99.85  E-value=2.3e-21  Score=145.93  Aligned_cols=125  Identities=18%  Similarity=0.279  Sum_probs=97.7

Q ss_pred             eeceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCC--CCCCCCceEEE
Q 029285           72 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGR--PEHGGRDRHTC  149 (196)
Q Consensus        72 ~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~--p~~~~~~~hi~  149 (196)
                      ++.+++||+|.|+|+++|++||+++|||++..+.+........+|+..++..++|+...........  ...+.+..|++
T Consensus         5 ~~~~i~Hv~l~V~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g~~~l~l~~~~~~~~~~~~~~~~~~~g~~Hia   84 (161)
T 3oa4_A            5 KSNKLDHIGIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQGVKIAFLEIGESKIELLEPLSEESPIAKFIQKRGEGIHHIA   84 (161)
T ss_dssp             CCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEEGGGTEEEEEEEETTEEEEEEEESSTTSHHHHHHHHHCSEEEEEE
T ss_pred             ccCcCCEEEEEECCHHHHHHHHHHccCCeEeeeeccCCCCeEEEEEeCCCeEEEEEeECCCCChHHHHhhcCCCCeEEEE
Confidence            4679999999999999999999999999998755433444567889999999999986544311100  11345788999


Q ss_pred             EEECCHHHHHHHHHHCCCeEEee-C----CCceEEEEE--cCCCCeEEEEeecC
Q 029285          150 IAIRDVSKLKMILDKAGISYTLS-K----SGRPAIFTR--DPDANALEFTQVDG  196 (196)
Q Consensus       150 f~v~dl~~~~~~l~~~G~~~~~~-~----~g~~~~~~~--DPdG~~iEl~e~~~  196 (196)
                      |.|+|+++++++|+++|+++... +    .|.+.+|++  |||||.|||.|.++
T Consensus        85 f~V~Did~~~~~l~~~G~~~~~~~~~~~~~g~~~~f~~~~DPdG~~iEl~~~~~  138 (161)
T 3oa4_A           85 IGVKSIEERIQEVKENGVQMINDEPVPGARGAQVAFLHPRSARGVLYEFCEKKE  138 (161)
T ss_dssp             EECSCHHHHHHHHHHTTCCBSCSSCEECGGGCEEEEBCGGGTTTCCEEEEECCC
T ss_pred             EEECCHHHHHHHHHHCCCEecccCcccCCCCcEEEEEeccCCCeEEEEEEecCC
Confidence            99999999999999999988544 2    345666773  99999999999753

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygen virulence, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A

Probab=99.85  E-value=4.8e-20  Score=136.78  Aligned_cols=122  Identities=20%  Similarity=0.315  Sum_probs=93.2

Q ss_pred             CCCceeceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceE
Q 029285           68 KIDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRH  147 (196)
Q Consensus        68 ~~~~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~p~~~~~~~h  147 (196)
                      ...|++.+++||.|.|.|++++++||+++|||++....+      ..+++..++..++|.......... .+....+..|
T Consensus        16 ~~~m~i~~l~hv~l~v~D~~~a~~FY~~vLG~~~~~~~~------~~~~l~~~~~~l~l~~~~~~~~~~-~~~~~~g~~h   88 (152)
T 3huh_A           16 SIQMIIDRIDHLVLTVSDISTTIRFYEEVLGFSAVTFKQ------NRKALIFGAQKINLHQQEMEFEPK-ASRPTPGSAD   88 (152)
T ss_dssp             ----CEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEETT------TEEEEEETTEEEEEEETTBCCSSC-CSSCCTTCCE
T ss_pred             cCCcccceeeEEEEEeCCHHHHHHHHHhcCCCEEEEccC------CeEEEEeCCeEEEEeccCCcCCCc-CcCCCCCccE
Confidence            345678999999999999999999999999999987632      347788899889998765432111 1223346689


Q ss_pred             EEEEEC-CHHHHHHHHHHCCCeEEeeC----C--C-ceEEEEEcCCCCeEEEEeecC
Q 029285          148 TCIAIR-DVSKLKMILDKAGISYTLSK----S--G-RPAIFTRDPDANALEFTQVDG  196 (196)
Q Consensus       148 i~f~v~-dl~~~~~~l~~~G~~~~~~~----~--g-~~~~~~~DPdG~~iEl~e~~~  196 (196)
                      ++|.+. |+++++++|+++|+++...+    .  | .+.+||+|||||.|||.+..+
T Consensus        89 i~f~~~~dl~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdG~~iEl~~~~~  145 (152)
T 3huh_A           89 LCFITSTPINDVVSEILQAGISIVEGPVERTGATGEIMSIYIRDPDGNLIEISQYVE  145 (152)
T ss_dssp             EEEEESSCHHHHHHHHHHTTCCCSEEEEEEEETTEEEEEEEEECTTCCEEEEEEC--
T ss_pred             EEEEecCCHHHHHHHHHHCCCeEecCCccccCCCCcEEEEEEECCCCCEEEEEeccc
Confidence            999998 99999999999999875432    1  2 388999999999999998653

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium}

Probab=99.85  E-value=4.1e-20  Score=136.20  Aligned_cols=121  Identities=26%  Similarity=0.412  Sum_probs=88.2

Q ss_pred             eccccCCCCCCceeceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCC--eEEEEEecCCCCCCCC
Q 029285           60 KEPIRDSDKIDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA--EMIHLMELPNPDPLSG  137 (196)
Q Consensus        60 ~e~~~~~~~~~~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~--~~l~l~~~~~~~~~~~  137 (196)
                      .+........+|++.+++||.|.|.|++++++||+++|||++....+..    ..+|+..++  ..++|...+..     
T Consensus        13 ~~~~~~~~~~~m~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~----~~~~~~~~~~~~~l~l~~~~~~-----   83 (141)
T 3ghj_A           13 GRENLYFQGVPMNIKGLFEVAVKVKNLEKSSQFYTEILGFEAGLLDSAR----RWNFLWVSGRAGMVVLQEEKEN-----   83 (141)
T ss_dssp             -------------CCCCCEEEEEESCHHHHHHHHHHTSCCEEEEEETTT----TEEEEEETTTTEEEEEEECCSS-----
T ss_pred             chhhhhhccCceeeceecEEEEEeCCHHHHHHHHHHhcCCEEEEecCCC----cEEEEEecCCCcEEEEeccCCC-----
Confidence            3445555667788999999999999999999999999999998865321    346777764  67787765221     


Q ss_pred             CCCCCCCceEEEEEEC--CHHHHHHHHHHCCCeEEeeC----CCceEEEEEcCCCCeEEEEee
Q 029285          138 RPEHGGRDRHTCIAIR--DVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQV  194 (196)
Q Consensus       138 ~p~~~~~~~hi~f~v~--dl~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~iEl~e~  194 (196)
                           .+..|++|.|+  |+++++++|+++|+++..+.    .+.+.+||+|||||.|||++.
T Consensus        84 -----~~~~h~~~~v~~~dld~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  141 (141)
T 3ghj_A           84 -----WQQQHFSFRVEKSEIEPLKKALESKGVSVHGPVNQEWMQAVSLYFADPNGHALEFTAL  141 (141)
T ss_dssp             -----CCCCEEEEEECGGGHHHHHHHHHHTTCCCEEEEEEGGGTEEEEEEECTTCCEEEEEEC
T ss_pred             -----CCCceEEEEEeHHHHHHHHHHHHHCCCeEeCCcccCCCCceEEEEECCCCCEEEEEEC
Confidence                 24579999998  99999999999999886332    346899999999999999863

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6

Probab=99.84  E-value=1.1e-19  Score=133.98  Aligned_cols=124  Identities=14%  Similarity=0.216  Sum_probs=93.3

Q ss_pred             ceeceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCC-----------CCCCceeEEEEeCC--eEEEEEecCCCCCC--
Q 029285           71 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPH-----------DKLPYRGAWLWVGA--EMIHLMELPNPDPL--  135 (196)
Q Consensus        71 ~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~-----------~~~~~~~~~l~~g~--~~l~l~~~~~~~~~--  135 (196)
                      +.+.+++|+.|.|+|++++++||++ |||++....+.           .......+++..++  ..++|+....+...  
T Consensus         7 ~~~~~i~hv~l~v~D~~~a~~FY~~-lG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~l~l~~~~~~~~~~~   85 (153)
T 1ss4_A            7 NKLLRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHSRIELSRFLTPPTIAD   85 (153)
T ss_dssp             CCEEEEEEEEEECSCHHHHHHHHHH-HTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTSSCEEEEEEEEESCCCCB
T ss_pred             ccccceeeEEEEeCCHHHHHHHHHH-CCCEEEeeccCCcchhheeeCCCCCcEEEEEEECCCCCcEEEEEEecCCCCccc
Confidence            3578999999999999999999999 99998864321           11234567788753  68888865322211  


Q ss_pred             C-CCCCCCCCceEEEEEECCHHHHHHHHHHCCCeEEeeC----CCceEEEEEcCCCCeEEEEeec
Q 029285          136 S-GRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQVD  195 (196)
Q Consensus       136 ~-~~p~~~~~~~hi~f~v~dl~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~iEl~e~~  195 (196)
                      . ..+..+.+.+|++|.|+|+++++++|+++|+++..++    +|.+.+||+|||||.|||.+..
T Consensus        86 ~~~~~~~~~g~~hl~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  150 (153)
T 1ss4_A           86 HRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYENSYRLCYIRGVEGILIGLAEEL  150 (153)
T ss_dssp             CTTCCSSSBEEEEEEEEESCHHHHHHHHHHTTCEESSCCEEETTTEEEEEEECGGGCEEEEEEEC
T ss_pred             ccCCCCCCCceEEEEEEeCCHHHHHHHHHHCCCeecCCCcccCCceEEEEEECCCCCEEEEEecc
Confidence            0 1122345677999999999999999999999885432    5678899999999999999864

>3vw9_A Lactoylglutathione lyase; glyoxalase, lyase-lyase inhibitor complex; HET: EPE HPJ; 1.47A {Homo sapiens} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* 2za0_A*

Probab=99.83  E-value=1e-19  Score=139.54  Aligned_cols=125  Identities=15%  Similarity=0.200  Sum_probs=95.5

Q ss_pred             ceeceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCC-------------------eEEEEEecCC
Q 029285           71 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA-------------------EMIHLMELPN  131 (196)
Q Consensus        71 ~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~-------------------~~l~l~~~~~  131 (196)
                      ....+++||+|.|+|++++++||+++|||++..+.+.....+...++..++                   ..++|+....
T Consensus        30 ~~~~~l~Hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~  109 (187)
T 3vw9_A           30 TKDFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWG  109 (187)
T ss_dssp             GTTCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESCCGGGSCSSHHHHHHHHTTCSSEEEEEEETT
T ss_pred             cceeEEEEEEEEeCCHHHHHHHHHHhcCcEEeeccccCCCceeEEEecCCCcccccccccchhhhcccCCceEEEEEecC
Confidence            345789999999999999999999999999998766555556667777653                   4788865432


Q ss_pred             CCCCC-CC----CCCCCCceEEEEEECCHHHHHHHHHHCCCeEEeeCC---CceEEEEEcCCCCeEEEEeec
Q 029285          132 PDPLS-GR----PEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKS---GRPAIFTRDPDANALEFTQVD  195 (196)
Q Consensus       132 ~~~~~-~~----p~~~~~~~hi~f~v~dl~~~~~~l~~~G~~~~~~~~---g~~~~~~~DPdG~~iEl~e~~  195 (196)
                      ..... ..    .....+..|++|.|+|+++++++|+++|+++...+.   .+..+|++|||||.|||+|..
T Consensus       110 ~~~~~~~~~~~g~~~~~g~~hl~f~v~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  181 (187)
T 3vw9_A          110 TEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILNPN  181 (187)
T ss_dssp             GGGCTTCCCCCSSSSSCBEEEEEEECSCHHHHHHHHHHTTCCEEECTTSSSSTTCEEEECTTCCEEEEECGG
T ss_pred             CCCCCccccccCCCCCCceeEEEEEECCHHHHHHHHHHCCCeEeeCCccCCcceEEEEECCCCCEEEEEEcc
Confidence            21111 01    112347789999999999999999999999977652   245689999999999999864

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A

Probab=99.83  E-value=3.2e-19  Score=129.88  Aligned_cols=111  Identities=23%  Similarity=0.383  Sum_probs=91.3

Q ss_pred             eceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEEEE
Q 029285           73 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  152 (196)
Q Consensus        73 i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~p~~~~~~~hi~f~v  152 (196)
                      +.+++|+.|.|+|++++++||+++|||++....+      ..+|+..++..++|......      +....+..|++|.|
T Consensus         2 i~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~------~~~~~~~~~~~l~l~~~~~~------~~~~~~~~h~~~~v   69 (135)
T 1nki_A            2 LTGLNHLTLAVADLPASIAFYRDLLGFRLEARWD------QGAYLELGSLWLCLSREPQY------GGPAADYTHYAFGI   69 (135)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET------TEEEEEETTEEEEEEECTTC------CCCCSSSCEEEEEE
T ss_pred             CceEeEEEEEeCCHHHHHHHHHHhcCCEEEEcCC------CceEEecCCEEEEEEeCCCC------CCCCCCcceEEEEc
Confidence            6789999999999999999999999999987542      23678888888888765321      12234668999999


Q ss_pred             C--CHHHHHHHHHHCCCeEEeeC-CCceEEEEEcCCCCeEEEEeec
Q 029285          153 R--DVSKLKMILDKAGISYTLSK-SGRPAIFTRDPDANALEFTQVD  195 (196)
Q Consensus       153 ~--dl~~~~~~l~~~G~~~~~~~-~g~~~~~~~DPdG~~iEl~e~~  195 (196)
                      +  |+++++++|+++|+++..++ .+++.++++|||||.|||.+.+
T Consensus        70 ~~~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  115 (135)
T 1nki_A           70 AAADFARFAAQLRAHGVREWKQNRSEGDSFYFLDPDGHRLEAHVGD  115 (135)
T ss_dssp             CHHHHHHHHHHHHHTTCCEEECCCSSSCEEEEECTTCCEEEEESCC
T ss_pred             cHHHHHHHHHHHHHCCCceecCCCCCeEEEEEECCCCCEEEEEECC
Confidence            8  99999999999999987654 4578999999999999999864

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2

Probab=99.83  E-value=3.5e-19  Score=130.64  Aligned_cols=114  Identities=23%  Similarity=0.377  Sum_probs=92.6

Q ss_pred             eceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEEEE
Q 029285           73 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  152 (196)
Q Consensus        73 i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~p~~~~~~~hi~f~v  152 (196)
                      +.+++||.|.|+|++++++||+++|||++....+      ..+|+..++..++|.......   ..+....+..|++|.|
T Consensus         2 i~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~------~~~~~~~~~~~l~l~~~~~~~---~~~~~~~~~~hi~~~v   72 (141)
T 1npb_A            2 LQSLNHLTLAVSDLQKSVTFWHELLGLTLHARWN------TGAYLTCGDLWVCLSYDEARQ---YVPPQESDYTHYAFTV   72 (141)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHTTSCCEEEEEET------TEEEEEETTEEEEEEECTTCC---CCCGGGSCSCEEEEEC
T ss_pred             CceEEEEEEEeCCHHHHHHHHHhccCCEEEeecC------CcEEEEECCEEEEEEECCCCC---CCCCCCCCceEEEEEe
Confidence            5789999999999999999999999999987542      246788888888888754321   1122334668999999


Q ss_pred             C--CHHHHHHHHHHCCCeEEeeC-CCceEEEEEcCCCCeEEEEeec
Q 029285          153 R--DVSKLKMILDKAGISYTLSK-SGRPAIFTRDPDANALEFTQVD  195 (196)
Q Consensus       153 ~--dl~~~~~~l~~~G~~~~~~~-~g~~~~~~~DPdG~~iEl~e~~  195 (196)
                      +  |+++++++|+++|+++...+ .+++.++++|||||.|||.+.+
T Consensus        73 ~~~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  118 (141)
T 1npb_A           73 AEEDFEPLSQRLEQAGVTIWKQNKSEGASFYFLDPDGHKLELHVGS  118 (141)
T ss_dssp             CHHHHHHHHHHHHHTTCCEEECCCSSSEEEEEECTTCCEEEEEECC
T ss_pred             CHHHHHHHHHHHHHCCCeEeccCCCceeEEEEECCCCCEEEEEECc
Confidence            7  99999999999999987654 4578999999999999999864

>4hc5_A Glyoxalase/bleomycin resistance protein/dioxygena; MCSG, GEBA genomes, structural genomics, midwest center for structural genomics; HET: MSE GOL; 1.45A {Sphaerobacter thermophilus}

Probab=99.82  E-value=2.8e-19  Score=128.70  Aligned_cols=119  Identities=22%  Similarity=0.274  Sum_probs=89.1

Q ss_pred             CceeceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeC--CeEEEEEecCCCCCCCCCCCCCCCceE
Q 029285           70 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG--AEMIHLMELPNPDPLSGRPEHGGRDRH  147 (196)
Q Consensus        70 ~~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g--~~~l~l~~~~~~~~~~~~p~~~~~~~h  147 (196)
                      .+++.+++|+.|.|+|++++++||+++|||++....+.+. ....+.+..+  +..++|........    +...++..|
T Consensus         8 ~~m~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~-~~~~~~~~~~~~~~~l~l~~~~~~~~----~~~~~~~~~   82 (133)
T 4hc5_A            8 SLMIAYVHSATIIVSDQEKALDFYVNTLGFEKVFDNQLDP-NMRFVTVVPPGAQTQVALGLPSWYED----GRKPGGYTG   82 (133)
T ss_dssp             CCSCCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEET-TEEEEEEECTTCSCEEEEECGGGCSS----CCCSCEEEE
T ss_pred             cccccceeEEEEEECCHHHHHHHHHhCcCCcEeeecccCC-CceEEEEECCCCceEEEEecCccccc----ccCCCCeEE
Confidence            4557899999999999999999999999999987653211 1122334433  34677776542111    112246689


Q ss_pred             EEEEECCHHHHHHHHHHCCCeEEee----CCCceEEEEEcCCCCeEEEEe
Q 029285          148 TCIAIRDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQ  193 (196)
Q Consensus       148 i~f~v~dl~~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdG~~iEl~e  193 (196)
                      ++|.|+|+++++++|+++|+++..+    +.|.+.++++|||||.|||.|
T Consensus        83 ~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DP~G~~~el~e  132 (133)
T 4hc5_A           83 ISLITRDIDEAYKTLTERGVTFTKPPEMMPWGQRATWFSDPDGNQFFLVE  132 (133)
T ss_dssp             EEEEESCHHHHHHHHHHTTCEESSSCEECTTSCEEEEEECTTCEEEEEEE
T ss_pred             EEEEeCCHHHHHHHHHHCCCEeecCCCcCCCCCEEEEEECCCCCEEEEEe
Confidence            9999999999999999999998643    345699999999999999987

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2

Probab=99.82  E-value=2.6e-19  Score=131.03  Aligned_cols=115  Identities=15%  Similarity=0.271  Sum_probs=89.2

Q ss_pred             eceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCc-eeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEEE
Q 029285           73 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPY-RGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIA  151 (196)
Q Consensus        73 i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~-~~~~l~~g~~~l~l~~~~~~~~~~~~p~~~~~~~hi~f~  151 (196)
                      +.+++|+.|.|+|++++++||+++|||++....+...... ...|+..++..++|+..+..      |  ..+..|++|.
T Consensus         2 i~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~g~~~l~l~~~~~~------~--~~~~~h~~~~   73 (139)
T 1r9c_A            2 IEGLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGDIWVAIMQGEKL------A--ERSYNHIAFK   73 (139)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHHHCCEEEEEGGGSTTCCSCEEEEEETTEEEEEEECCCC------S--SCCSCEEEEE
T ss_pred             CceEEEEEEEeCCHHHHHHHHHHhhCCEEeecCCCccccccceEEEEECCEEEEEEeCCCC------C--CCCeeEEEEE
Confidence            5789999999999999999999999999987543211110 11267788888888764321      1  2466899999


Q ss_pred             EC--CHHHHHHHHHHCCCeEEeeC----CCceEEEEEcCCCCeEEEEeec
Q 029285          152 IR--DVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQVD  195 (196)
Q Consensus       152 v~--dl~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~iEl~e~~  195 (196)
                      |+  |+++++++|+++|+++..++    ++++.+|++|||||.|||.+.+
T Consensus        74 v~~~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  123 (139)
T 1r9c_A           74 IDDADFDRYAERVGKLGLDMRPPRPRVEGEGRSIYFYDDDNHMFELHTGT  123 (139)
T ss_dssp             CCGGGHHHHHHHHHHHTCCBCCCCC-----CCEEEEECTTSCEEEEECCC
T ss_pred             cCHHHHHHHHHHHHHCCCcccCCcccCCCCeEEEEEECCCCCEEEEEeCC
Confidence            99  99999999999999886543    3578899999999999999853

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens}

Probab=99.82  E-value=3.4e-19  Score=131.94  Aligned_cols=119  Identities=18%  Similarity=0.294  Sum_probs=91.2

Q ss_pred             CCceeceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEE
Q 029285           69 IDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHT  148 (196)
Q Consensus        69 ~~~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~p~~~~~~~hi  148 (196)
                      ++|++.+++||.|.|+|++++++||+++|||++....+      ...++..++..+.|........... .....+..|+
T Consensus        21 ~~m~i~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~------~~~~l~~g~~~l~l~~~~~~~~~~~-~~~~~g~~~~   93 (147)
T 3zw5_A           21 QSMLIRRLDHIVMTVKSIKDTTMFYSKILGMEVMTFKE------DRKALCFGDQKFNLHEVGKEFEPKA-AHPVPGSLDI   93 (147)
T ss_dssp             HHTSCEEEEEEEEEESCHHHHHHHHHHHHCCEEEEETT------TEEEEEETTEEEEEEETTSCCSSCC-SSCCTTCCEE
T ss_pred             cceecccccEEEEEeCCHHHHHHHHHHhcCCEEEecCC------CceEEEECCcEEEEEEcCCCcCccc-CCCCCCCceE
Confidence            35668899999999999999999999999999986432      1356888888888887654322111 1122355789


Q ss_pred             EEEEC-CHHHHHHHHHHCCCeEEeeC---C---C-ceEEEEEcCCCCeEEEEee
Q 029285          149 CIAIR-DVSKLKMILDKAGISYTLSK---S---G-RPAIFTRDPDANALEFTQV  194 (196)
Q Consensus       149 ~f~v~-dl~~~~~~l~~~G~~~~~~~---~---g-~~~~~~~DPdG~~iEl~e~  194 (196)
                      +|.+. |+++++++|+++|+++...+   .   | .+.+||+|||||.|||.++
T Consensus        94 ~~~~~~dl~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdGn~iEl~~y  147 (147)
T 3zw5_A           94 CLITEVPLEEMIQHLKACDVPIEEGPVPRTGAKGPIMSIYFRDPDRNLIEVSNY  147 (147)
T ss_dssp             EEECSSCHHHHHHHHHHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEEEC
T ss_pred             EEEeccCHHHHHHHHHHcCCceeeCcccccCCCCceEEEEEECCCCCEEEEecC
Confidence            99886 99999999999999875432   1   2 3689999999999999874

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens}

Probab=99.82  E-value=7.4e-20  Score=137.59  Aligned_cols=120  Identities=18%  Similarity=0.342  Sum_probs=93.6

Q ss_pred             ceeceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCeEEEEEecCCCCC-C--CCCC-CCCCCce
Q 029285           71 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP-L--SGRP-EHGGRDR  146 (196)
Q Consensus        71 ~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~-~--~~~p-~~~~~~~  146 (196)
                      +++.+++||.|.|+|++++++||+++|||++....+.     ..+|+..++..+.++....... .  ...+ ..+.+..
T Consensus         4 ~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~-----~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~   78 (160)
T 3r4q_A            4 KPPSAIMETALYADDLDAAEAFYRDVFGLEMVLKLPG-----QLVFFKCGRQMLLLFDPQESSRADANNPIPRHGAVGQG   78 (160)
T ss_dssp             CCCSCEEEEEEECSCHHHHHHHHHHHSCCEEEEEETT-----TEEEEEETTEEEEEECHHHHTCCCTTCCSCCCEEEEEC
T ss_pred             cccccccEEEEEeCCHHHHHHHHHHhcCCEEEEecCC-----cEEEEeCCCEEEEEEecCCccCccccCCCCcCCCccee
Confidence            4578999999999999999999999999999876542     3577888888777775432211 0  0111 2234568


Q ss_pred             EEEEEE---CCHHHHHHHHHHCCCeEEee---CCCceEEEEEcCCCCeEEEEeec
Q 029285          147 HTCIAI---RDVSKLKMILDKAGISYTLS---KSGRPAIFTRDPDANALEFTQVD  195 (196)
Q Consensus       147 hi~f~v---~dl~~~~~~l~~~G~~~~~~---~~g~~~~~~~DPdG~~iEl~e~~  195 (196)
                      |++|.|   +|+++++++|+++|+++..+   +.|++.++++|||||.|||.+.+
T Consensus        79 hi~f~V~~~~dld~~~~~l~~~G~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  133 (160)
T 3r4q_A           79 HFCFYADDKAEVDEWKTRFEALEIPVEHYHRWPNGSYSVYIRDPAGNSVEVGEGK  133 (160)
T ss_dssp             EEEEEESSHHHHHHHHHHHHTTTCCCCEEEECTTSCEEEEEECTTCCEEEEEEGG
T ss_pred             EEEEEeCCHHHHHHHHHHHHHCCCEEeccccccCCcEEEEEECCCCCEEEEEeCC
Confidence            999999   89999999999999988543   24789999999999999999864

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A*

Probab=99.82  E-value=5.7e-19  Score=128.19  Aligned_cols=112  Identities=19%  Similarity=0.140  Sum_probs=87.3

Q ss_pred             eceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeC-CeEEEEEecCCCCCCCCCCCCCCCceEEEEE
Q 029285           73 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-AEMIHLMELPNPDPLSGRPEHGGRDRHTCIA  151 (196)
Q Consensus        73 i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g-~~~l~l~~~~~~~~~~~~p~~~~~~~hi~f~  151 (196)
                      +.+++||.|.|+|++++++||+++|||++....+      ..+++..+ +..+.|+....+.     +...++..|++|.
T Consensus        11 ~~~i~~v~l~v~D~~~s~~FY~~~lG~~~~~~~~------~~~~~~~~~~~~l~l~~~~~~~-----~~~~~~~~~~~~~   79 (132)
T 3sk2_A           11 TITPNLQLVYVSNVERSTDFYRFIFKKEPVFVTP------RYVAFPSSGDALFAIWSGGEEP-----VAEIPRFSEIGIM   79 (132)
T ss_dssp             CCCCCEEEEECSCHHHHHHHHHHHHTCCCSEECS------SEEEEECSTTCEEEEESSSCCC-----CTTSCCCEEEEEE
T ss_pred             cceeeEEEEEECCHHHHHHHHHHHcCCeEEEcCC------CEEEEEcCCCcEEEEEeCCCCC-----cCCCCCcceEEEE
Confidence            4689999999999999999999999999876543      22445544 5688888765221     1123456799999


Q ss_pred             ECC---HHHHHHHHHH---CCCeEEeeC---CCceEEEEEcCCCCeEEEEeec
Q 029285          152 IRD---VSKLKMILDK---AGISYTLSK---SGRPAIFTRDPDANALEFTQVD  195 (196)
Q Consensus       152 v~d---l~~~~~~l~~---~G~~~~~~~---~g~~~~~~~DPdG~~iEl~e~~  195 (196)
                      |+|   +++++++|++   +|+++..++   ..++.++|+|||||.|||.++|
T Consensus        80 v~~~~dv~~~~~~l~~~~~~G~~~~~~p~~~~~g~~~~~~DPdGn~iel~~~d  132 (132)
T 3sk2_A           80 LPTGEDVDKLFNEWTKQKSHQIIVIKEPYTDVFGRTFLISDPDGHIIRVCPLD  132 (132)
T ss_dssp             ESSHHHHHHHHHHHHHCSSSCCEEEEEEEEETTEEEEEEECTTCCEEEEEECC
T ss_pred             eCCHHHHHHHHHHHHhhhcCCCEEeeCCcccCceEEEEEECCCCCEEEEEeCC
Confidence            986   9999999999   999986442   2238999999999999999875

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A

Probab=99.82  E-value=4e-20  Score=135.70  Aligned_cols=124  Identities=15%  Similarity=0.249  Sum_probs=93.5

Q ss_pred             eeceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCC------eEEEEEecCCCCCCCC-C-CCCC-
Q 029285           72 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA------EMIHLMELPNPDPLSG-R-PEHG-  142 (196)
Q Consensus        72 ~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~------~~l~l~~~~~~~~~~~-~-p~~~-  142 (196)
                      ++.+++|+.|.|+|++++++||+++|||++....+.+......+++..++      ..++|++......... . ...+ 
T Consensus         6 m~~~~~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~   85 (148)
T 1jc4_A            6 LFICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLNDESTVAKWLAKHNG   85 (148)
T ss_dssp             CCSEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEESSTTSHHHHHHHHTTT
T ss_pred             ccceeeEEEEEeCCHHHHHHHHHHccCceeeecccCCCCCeEEEEEEcCCCCcCcceEEEEeecCCCCChHHHHHHhCCC
Confidence            46799999999999999999999999999987543323334567888876      6788887654321100 0 0122 


Q ss_pred             -CCceEEEEEECCHHHHHHHHHHCCCeEE-eeC----CCceEEEE--EcCCCCeEEEEeec
Q 029285          143 -GRDRHTCIAIRDVSKLKMILDKAGISYT-LSK----SGRPAIFT--RDPDANALEFTQVD  195 (196)
Q Consensus       143 -~~~~hi~f~v~dl~~~~~~l~~~G~~~~-~~~----~g~~~~~~--~DPdG~~iEl~e~~  195 (196)
                       .+..|++|.|+|+++++++|+++|+++. ..+    .|.+.+|+  +|||||.|||.+.+
T Consensus        86 ~~g~~h~~~~v~d~~~~~~~l~~~G~~~~~~~p~~~~~g~~~~~~~~~DPdG~~iel~~~~  146 (148)
T 1jc4_A           86 RAGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGGNRINFMHPKSGKGVLIELTQYP  146 (148)
T ss_dssp             CCEEEEEEEECSCHHHHHHHHHHHTCCBSCSSCEECSSSCEEEEBCGGGGTTSCEEEEECC
T ss_pred             CCceEEEEEECCCHHHHHHHHHHCCCeecCcCcccCCCceEEEEEeecCCCcEEEEEEecC
Confidence             4678999999999999999999999876 222    34466666  99999999999875

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A

Probab=99.82  E-value=4.7e-19  Score=128.12  Aligned_cols=115  Identities=16%  Similarity=0.278  Sum_probs=88.3

Q ss_pred             eceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCc-eeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEEE
Q 029285           73 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPY-RGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIA  151 (196)
Q Consensus        73 i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~-~~~~l~~g~~~l~l~~~~~~~~~~~~p~~~~~~~hi~f~  151 (196)
                      +.+++|+.|.|+|++++++||+++|||++....+...... ...++..++..++|...+..      +  ..+..|++|.
T Consensus         2 i~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~------~--~~~~~h~~~~   73 (133)
T 2p7o_A            2 ISGLSHITLIVKDLNKTTAFLQNIFNAEEIYSSGDKTFSLSKEKFFLIAGLWICIMEGDSL------Q--ERTYNHIAFQ   73 (133)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHHHHCCEECC-----CCCSSCEEEEEETTEEEEEEECSSC------C--CCCSCEEEEE
T ss_pred             CceEEEEEEEcCCHHHHHHHHHHhcCCEEeeecCCcccccCCceEEEeCCEEEEEecCCCC------C--CCCeeEEEEE
Confidence            5789999999999999999999999999886543211110 11367788888888764321      1  2466899999


Q ss_pred             EC--CHHHHHHHHHHCCCeEEeeC----CCceEEEEEcCCCCeEEEEeec
Q 029285          152 IR--DVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQVD  195 (196)
Q Consensus       152 v~--dl~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~iEl~e~~  195 (196)
                      |+  |+++++++|+++|+++..++    ++++.++++|||||.|||.+.+
T Consensus        74 v~~~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  123 (133)
T 2p7o_A           74 IQSEEVDEYTERIKALGVEMKPERPRVQGEGRSIYFYDFDNHLFELHAGT  123 (133)
T ss_dssp             CCGGGHHHHHHHHHHHTCCEECCCCCCTTCCCEEEEECSSSCEEEEECSS
T ss_pred             cCHHHHHHHHHHHHHCCCcccCCCccCCCCeeEEEEECCCCCEEEEEcCC
Confidence            95  99999999999999987653    3568999999999999999864

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi}

Probab=99.81  E-value=1.1e-19  Score=134.92  Aligned_cols=119  Identities=17%  Similarity=0.124  Sum_probs=90.8

Q ss_pred             ceeceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCC-CCCCCceEEE
Q 029285           71 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRP-EHGGRDRHTC  149 (196)
Q Consensus        71 ~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~p-~~~~~~~hi~  149 (196)
                      |++.++.|+.|.|+|++++++||+++|||++....+      ..+++..++..+.|+...........+ ..+.+..|++
T Consensus         1 MM~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~------~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~l~   74 (150)
T 3bqx_A            1 MSLQQVAVITLGIGDLEASARFYGEGFGWAPVFRNP------EIIFYQMNGFVLATWLVQNLQEDVGVAVTSRPGSMALA   74 (150)
T ss_dssp             --CCCCCEEEEEESCHHHHHHHHHHTSCCCCSEECS------SEEEEECSSSEEEEEEHHHHHHHHSSCCCSSCCSCEEE
T ss_pred             CCccceEEEEEEcCCHHHHHHHHHHhcCCEeecCCC------CEEEEEcCCEEEEEEeccccccccCCCCCCCCCeEEEE
Confidence            345789999999999999999999999999876531      346788888888888753210000001 1134567999


Q ss_pred             EEE---CCHHHHHHHHHHCCCeEEeeC----CCceEEEEEcCCCCeEEEEeec
Q 029285          150 IAI---RDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQVD  195 (196)
Q Consensus       150 f~v---~dl~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~iEl~e~~  195 (196)
                      |.|   +|+++++++|+++|+++..++    .|.+.++|+|||||.|||.+.+
T Consensus        75 f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  127 (150)
T 3bqx_A           75 HNVRAETEVAPLMERLVAAGGQLLRPADAPPHGGLRGYVADPDGHIWEIAFNP  127 (150)
T ss_dssp             EECSSGGGHHHHHHHHHHTTCEEEEEEECCTTSSEEEEEECTTCCEEEEEECT
T ss_pred             EEeCCHHHHHHHHHHHHHCCCEEecCCcccCCCCEEEEEECCCCCEEEEEeCC
Confidence            999   899999999999999986542    3668999999999999999865

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A*

Probab=99.80  E-value=7.7e-19  Score=134.53  Aligned_cols=125  Identities=16%  Similarity=0.202  Sum_probs=91.2

Q ss_pred             ceeceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeC-------------------CeEEEEEecCC
Q 029285           71 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-------------------AEMIHLMELPN  131 (196)
Q Consensus        71 ~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g-------------------~~~l~l~~~~~  131 (196)
                      +.+++++|+.|.|.|++++++||+++|||++......+...+...++..+                   +..++|+....
T Consensus        27 ~~~~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~L~~~~~  106 (184)
T 2za0_A           27 TKDFLLQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAWTFSRKATLELTHNWG  106 (184)
T ss_dssp             GTTCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESCCGGGSCSSHHHHHHHHTTSSSEEEEEEETT
T ss_pred             ccceeEEEEEEEeCCHHHHHHHHHHhcCCEEEEeccCCCCCceeEEecccccccCCcccchheeeecCCCceEEEEecCC
Confidence            44679999999999999999999999999998754322222334455542                   35788876533


Q ss_pred             CCCCCC-----CCCCCCCceEEEEEECCHHHHHHHHHHCCCeEEeeCC---CceEEEEEcCCCCeEEEEeec
Q 029285          132 PDPLSG-----RPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKS---GRPAIFTRDPDANALEFTQVD  195 (196)
Q Consensus       132 ~~~~~~-----~p~~~~~~~hi~f~v~dl~~~~~~l~~~G~~~~~~~~---g~~~~~~~DPdG~~iEl~e~~  195 (196)
                      ....+.     ......+..|++|.|+|+++++++|+++|+++...+.   +++.+||+|||||.|||.+..
T Consensus       107 ~~~~~~~~~~~~~~~~~g~~hi~f~v~dvd~~~~~l~~~G~~~~~~p~~~~~~~~~~~~DPdG~~iel~~~~  178 (184)
T 2za0_A          107 TEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILNPN  178 (184)
T ss_dssp             GGGCTTCCCCCSSSSSCCEEEEEEECSCHHHHHHHHHHTTCCEEECTTSSSSTTCEEEECTTCCEEEEECTT
T ss_pred             CCCCcccccccCCCCCCCeeEEEEEeCCHHHHHHHHHHCCCeeecCCcCCCceeEEEEECCCCCEEEEEecC
Confidence            110000     0111246689999999999999999999999876542   356799999999999999864

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2

Probab=99.80  E-value=1.3e-18  Score=123.62  Aligned_cols=111  Identities=18%  Similarity=0.246  Sum_probs=84.9

Q ss_pred             ceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEEEEC
Q 029285           74 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR  153 (196)
Q Consensus        74 ~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~p~~~~~~~hi~f~v~  153 (196)
                      +++.|+.|.|+|++++++||+++|||++....+      ..+++..++..+.+.... ..+.   ...+.+ .|++|.|+
T Consensus         4 m~i~~v~l~v~D~~~a~~FY~~~lG~~~~~~~~------~~~~~~~~~~~l~l~~~~-~~~~---~~~~~~-~~~~~~v~   72 (118)
T 2i7r_A            4 MNLNQLDIIVSNVPQVCADLEHILDKKADYAND------GFAQFTIGSHCLMLSQNH-LVPL---ENFQSG-IIIHIEVE   72 (118)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHHHTSCCSEEET------TEEEEEETTEEEEEESSC-SSSC---CCCCSC-EEEEEECS
T ss_pred             ceeeEEEEEeCCHHHHHHHHHHHhCCeeEEeCC------CEEEEEeCCeEEEEEcCC-CCCc---ccCCCe-EEEEEEEC
Confidence            579999999999999999999999999875432      146677887766553221 1110   111223 58999999


Q ss_pred             CHHHHHHHHHHCCCeEEee----CCCceEEEEEcCCCCeEEEEeec
Q 029285          154 DVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVD  195 (196)
Q Consensus       154 dl~~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdG~~iEl~e~~  195 (196)
                      |+++++++|+++|+++..+    +.|.+.++++|||||.|||.+.+
T Consensus        73 d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  118 (118)
T 2i7r_A           73 DVDQNYKRLNELGIKVLHGPTVTDWGTESLLVQGPAGLVLDFYRMK  118 (118)
T ss_dssp             CHHHHHHHHHHHTCCEEEEEEECTTSCEEEEEECGGGCEEEEEECC
T ss_pred             CHHHHHHHHHHCCCceecCCccccCccEEEEEECCCccEEEEEecC
Confidence            9999999999999987543    24668999999999999999864

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}

Probab=99.80  E-value=1.6e-18  Score=125.72  Aligned_cols=112  Identities=19%  Similarity=0.279  Sum_probs=81.7

Q ss_pred             ceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEE-eCCeEEEEEecCCCCCCCCCCCCCCCceEEEEEE
Q 029285           74 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLW-VGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  152 (196)
Q Consensus        74 ~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~-~g~~~l~l~~~~~~~~~~~~p~~~~~~~hi~f~v  152 (196)
                      ..++||.|.|+|++++++||++ |||++....... .  ..+++. .++..+.|.......      ...++..|++|.|
T Consensus         5 ~~i~hv~l~v~D~~~a~~FY~~-LG~~~~~~~~~~-~--~~~~~~~~~~~~l~l~~~~~~~------~~~~~~~~l~f~v   74 (128)
T 3g12_A            5 LLITSITINTSHLQGMLGFYRI-IGFQFTASKVDK-G--SEVHRAVHNGVEFSLYSIQNPQ------RSQIPSLQLGFQI   74 (128)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHH-HTCCCEEC--------CCEEEEEETTEEEEEEECCCCS------SCCCCSEEEEEEE
T ss_pred             ceEEEEEEEcCCHHHHHHHHHH-CCCEEecccCCC-C--CEEEEEeCCCeEEEEEECCCCc------CCCCCceEEEEEe
Confidence            4789999999999999999999 999987642211 1  235565 577778876543311      1122346899999


Q ss_pred             CCHHHHHHHHHHCCCe-EEee----CCCceEEEEEcCCCCeEEEEeecC
Q 029285          153 RDVSKLKMILDKAGIS-YTLS----KSGRPAIFTRDPDANALEFTQVDG  196 (196)
Q Consensus       153 ~dl~~~~~~l~~~G~~-~~~~----~~g~~~~~~~DPdG~~iEl~e~~~  196 (196)
                      +|+++++++|+++|++ +..+    ++|.+ ++|+|||||.|||.+.++
T Consensus        75 ~dvd~~~~~l~~~G~~~~~~~p~~~~~G~~-~~~~DPdGn~iel~~~~~  122 (128)
T 3g12_A           75 TDLEKTVQELVKIPGAMCILDPTDMPDGKK-AIVLDPDGHSIELCELEG  122 (128)
T ss_dssp             SCHHHHHHHHTTSTTCEEEEEEEECC-CEE-EEEECTTCCEEEEEC---
T ss_pred             CCHHHHHHHHHHCCCceeccCceeCCCccE-EEEECCCCCEEEEEEecc
Confidence            9999999999999999 6433    24555 999999999999998753

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A*

Probab=99.79  E-value=6.1e-19  Score=128.84  Aligned_cols=119  Identities=20%  Similarity=0.251  Sum_probs=88.7

Q ss_pred             eceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEe-CCeEEEEEecCCCC--CCCCCCCCCCCceEEE
Q 029285           73 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNPD--PLSGRPEHGGRDRHTC  149 (196)
Q Consensus        73 i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~-g~~~l~l~~~~~~~--~~~~~p~~~~~~~hi~  149 (196)
                      ++++.|+.|.|+|++++++||++ |||++..+.+..    ..+.+.. ++..+.|+......  .....+..+++..|++
T Consensus         2 ~~~l~hv~l~v~D~~~a~~FY~~-LG~~~~~~~~~~----~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~l~   76 (138)
T 2a4x_A            2 SARISLFAVVVEDMAKSLEFYRK-LGVEIPAEADSA----PHTEAVLDGGIRLAWDTVETVRSYDPEWQAPTGGHRFAIA   76 (138)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHT-TTCCCCGGGGGC----SEEEEECTTSCEEEEEEHHHHHHHCTTCCCCBSSCSEEEE
T ss_pred             cceeeEEEEEECCHHHHHHHHHH-cCCcEEecCCCC----ceEEEEcCCCeEEEEecCccchhhCcccCCCCCCCeEEEE
Confidence            36899999999999999999999 999987654321    1344555 56678887642110  0001122335678999


Q ss_pred             EEEC---CHHHHHHHHHHCCCeEEee----CCCceEEEEEcCCCCeEEEEeecC
Q 029285          150 IAIR---DVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVDG  196 (196)
Q Consensus       150 f~v~---dl~~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdG~~iEl~e~~~  196 (196)
                      |.|+   |+++++++|+++|+++..+    +.|.+.++|+|||||.|||.+..|
T Consensus        77 f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~~  130 (138)
T 2a4x_A           77 FEFPDTASVDKKYAELVDAGYEGHLKPWNAVWGQRYAIVKDPDGNVVDLFAPLP  130 (138)
T ss_dssp             EECSSHHHHHHHHHHHHHTTCCEEEEEEEETTTEEEEEEECTTCCEEEEEEECT
T ss_pred             EEeCCHHHHHHHHHHHHHCCCceeeCCcccCCCcEEEEEECCCCCEEEEEeCCc
Confidence            9999   9999999999999988643    346689999999999999998764

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125}

Probab=99.79  E-value=8.1e-19  Score=130.04  Aligned_cols=120  Identities=19%  Similarity=0.232  Sum_probs=91.2

Q ss_pred             CCceeceeeEEEEEcCCHHHHHHHH---HhccCCEEeeecCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCc
Q 029285           69 IDYGVVSVHHVGILCENLERSLEFY---QNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRD  145 (196)
Q Consensus        69 ~~~~i~~l~hv~l~v~Dl~~a~~FY---~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~p~~~~~~  145 (196)
                      +-+.+.+++|+.|.|+|++++++||   +++|||++....+.     ...|+. ++..++|+....+...........+.
T Consensus        14 ~~~~~~~i~hv~l~v~Dl~~a~~FY~~~~~~LG~~~~~~~~~-----~~~~~~-g~~~l~l~~~~~~~~~~~~~~~~~g~   87 (146)
T 3ct8_A           14 NLYFQGMLHHVEINVDHLEESIAFWDWLLGELGYEDYQSWSR-----GKSYKH-GKTYLVFVQTEDRFQTPTFHRKRTGL   87 (146)
T ss_dssp             CTTTTTSCCEEEEEESCHHHHHHHHHHHHHHTTCEEEEEETT-----EEEEEE-TTEEEEEEECCGGGSCSCCCTTSSSC
T ss_pred             ccccccceeEEEEEeCCHHHHHHHHHhhhhhCCCEEEEecCC-----CceEec-CCeEEEEEEcCCCcccccccccCCCc
Confidence            4455789999999999999999999   99999999876432     125776 77788888765311000111122456


Q ss_pred             eEEEEEEC---CHHHHHHHHHHCCCeEEee-C------CCceEEEEEcCCCCeEEEEee
Q 029285          146 RHTCIAIR---DVSKLKMILDKAGISYTLS-K------SGRPAIFTRDPDANALEFTQV  194 (196)
Q Consensus       146 ~hi~f~v~---dl~~~~~~l~~~G~~~~~~-~------~g~~~~~~~DPdG~~iEl~e~  194 (196)
                      .|++|.|+   |+++++++|+++|+++... +      ++.+.+||+|||||.|||.++
T Consensus        88 ~hi~f~v~~~~dv~~~~~~l~~~G~~~~~~~p~~~~~g~~~~~~~~~DPdG~~iel~~p  146 (146)
T 3ct8_A           88 NHLAFHAASREKVDELTQKLKERGDPILYEDRHPFAGGPNHYAVFCEDPNRIKVEIVAP  146 (146)
T ss_dssp             CEEEEECSCHHHHHHHHHHHHHHTCCBCCTTTTTCTTCTTCCEEEEECTTCCEEEEECC
T ss_pred             eEEEEECCCHHHHHHHHHHHHHcCCccccCCCccccCCCceEEEEEECCCCCEEEEEeC
Confidence            89999999   9999999999999988652 2      236789999999999999874

>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp}

Probab=99.79  E-value=4.3e-18  Score=123.47  Aligned_cols=112  Identities=22%  Similarity=0.261  Sum_probs=85.1

Q ss_pred             eceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEEEE
Q 029285           73 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  152 (196)
Q Consensus        73 i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~p~~~~~~~hi~f~v  152 (196)
                      .++++||.|.|+|++++++||+++|||++....+      ..+.+..++..+.+........    | ...+..|++|.+
T Consensus         7 ~~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~------~~~~~~~~g~~~~l~~~~~~~~----~-~~~~~~h~~~~~   75 (135)
T 3rri_A            7 PNDVFHLAIPARDLDEAYDFYVTKLGCKLARRYP------DRITLDFFGDQLVCHLSDRWDR----E-VSMYPRHFGITF   75 (135)
T ss_dssp             TTSEEEEEEEESCHHHHHHHHTTTTCCEEEEEET------TEEEEEETTEEEEEEECSCSCS----S-CCSSSCEEEEEC
T ss_pred             CCccceEEEEcCCHHHHHHHHHHhcCCEeeccCC------CcEEEEEeCCEEEEEEcCcccc----c-CCCCCCeEEEEE
Confidence            4689999999999999999999999999976432      1244555666677665443221    1 223467999998


Q ss_pred             C---CHHHHHHHHHHCCCeEEeeC--------CCceEEEEEcCCCCeEEEEeec
Q 029285          153 R---DVSKLKMILDKAGISYTLSK--------SGRPAIFTRDPDANALEFTQVD  195 (196)
Q Consensus       153 ~---dl~~~~~~l~~~G~~~~~~~--------~g~~~~~~~DPdG~~iEl~e~~  195 (196)
                      .   |+++++++|+++|+++..++        .+.+.+||+|||||.|||.++.
T Consensus        76 ~~~~d~~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~~~~DPdGn~iel~~~~  129 (135)
T 3rri_A           76 RDKKHFDNLYKLAKQRGIPFYHDLSRRFEGLIEEHETFFLIDPSNNLLEFKYYF  129 (135)
T ss_dssp             SSHHHHHHHHHHHHHTTCCEEEEEEEESTTSTTCEEEEEEECTTCCEEEEEEES
T ss_pred             cChHhHHHHHHHHHHcCCceecCcccccCCCCCceEEEEEECCCCCEEEEEEEC
Confidence            6   59999999999999885432        2347899999999999999874

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP}

Probab=99.79  E-value=5.1e-18  Score=123.63  Aligned_cols=115  Identities=19%  Similarity=0.237  Sum_probs=87.8

Q ss_pred             eEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCce-EEEEEECCH
Q 029285           77 HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDR-HTCIAIRDV  155 (196)
Q Consensus        77 ~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~p~~~~~~~-hi~f~v~dl  155 (196)
                      -.+.|.|+|++++++||+++|||++..+.+.+ .....+.+..++..+.|.........   +..++... |++|.|+|+
T Consensus         4 ~~i~l~v~D~~~a~~FY~~~lG~~~~~~~~~~-g~~~~~~l~~~~~~l~l~~~~~~~~~---~~~~~~~~~~~~~~v~dv   79 (137)
T 3itw_A            4 MVVELAYTDPDRAVDWLVRVFGFRLLLRQPAI-GTIRHADLDTGGGIVMVRRTGEPYTV---SCAGGHTCKQVIVWVSDV   79 (137)
T ss_dssp             CEEEEEESCHHHHHHHHHHHHCCEEEEEESSS-SSCSEEEEECSSSEEEEEETTCCSSC---EECCCCCCCEEEEEESCH
T ss_pred             EEEEEEECCHHHHHHHHHHccCCEEEEEecCC-CcEEEEEEecCCeEEEEEecCCCcCc---cCCCCCcEEEEEEEeCCH
Confidence            46899999999999999999999998765543 22335667778888888764322111   11222334 999999999


Q ss_pred             HHHHHHHHHCCCeEEee----CCCceEEEEEcCCCCeEEEEeec
Q 029285          156 SKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVD  195 (196)
Q Consensus       156 ~~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdG~~iEl~e~~  195 (196)
                      ++++++|+++|+++..+    +.|.+.++|+|||||.|||.+..
T Consensus        80 ~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  123 (137)
T 3itw_A           80 DEHFMRSTAAGADIVQPLQDKPWGLRQYLVRDLEGHLWEFTRHL  123 (137)
T ss_dssp             HHHHHHHHHTTCEEEEEEEEETTTEEEEEEECSSSCEEEEEECC
T ss_pred             HHHHHHHHHcCCeeccCccccCCCcEEEEEECCCCCEEEEEEEc
Confidence            99999999999988644    35679999999999999999863

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila}

Probab=99.79  E-value=2.5e-18  Score=127.92  Aligned_cols=114  Identities=18%  Similarity=0.202  Sum_probs=85.9

Q ss_pred             eceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEe-CCeEEEEEecCCCCCCCCCCCCCCCceEEEEE
Q 029285           73 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNPDPLSGRPEHGGRDRHTCIA  151 (196)
Q Consensus        73 i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~-g~~~l~l~~~~~~~~~~~~p~~~~~~~hi~f~  151 (196)
                      +.++.||.|.|.|++++++||+++|||++....+      ..+++.. ++..+.|+........   +...++..|++|.
T Consensus         4 ~~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~------~~~~~~~~~g~~l~l~~~~~~~~~---~~~~~~~~~l~f~   74 (148)
T 3rhe_A            4 LSDPNLVLFYVKNPAKSEEFYKNLLDTQPIESSP------TFAMFVMKTGLRLGLWAQEEIEPK---AHQTGGGMELSFQ   74 (148)
T ss_dssp             ---CEEEEEEESCHHHHHHHHHHHHTCCCSEECS------SEEEEECTTSCEEEEEEGGGCSSC---CC----CEEEEEE
T ss_pred             cccccEEEEEeCCHHHHHHHHHHHcCCEEeccCC------CEEEEEcCCCcEEEEecCCcCCcc---ccCCCCeEEEEEE
Confidence            4689999999999999999999999999887542      2466776 6778888766433211   1123355799999


Q ss_pred             ECC---HHHHHHHHHHCCCeEEeeC---CCceEEEEEcCCCCeEEEEeec
Q 029285          152 IRD---VSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQVD  195 (196)
Q Consensus       152 v~d---l~~~~~~l~~~G~~~~~~~---~g~~~~~~~DPdG~~iEl~e~~  195 (196)
                      |++   +++++++|+++|+++..++   ..++.++|+|||||.|||.+..
T Consensus        75 v~d~~dvd~~~~~l~~~G~~i~~~p~~~~~G~~~~~~DPdG~~iel~~~~  124 (148)
T 3rhe_A           75 VNSNEMVDEIHRQWSDKEISIIQPPTQMDFGYTFVGVDPDEHRLRIFCLK  124 (148)
T ss_dssp             CSCHHHHHHHHHHHHHTTCCEEEEEEEETTEEEEEEECTTCCEEEEEEEC
T ss_pred             cCCHHHHHHHHHHHHhCCCEEEeCCeecCCCcEEEEECCCCCEEEEEEcC
Confidence            987   9999999999999986432   2248899999999999999875

>4gym_A Glyoxalase/bleomycin resistance protein/dioxygena; PSI-biology, midwest center for structural genomics, MCSG, oxidoreductase; HET: MSE; 1.56A {Conexibacter woesei}

Probab=99.79  E-value=3.5e-18  Score=126.50  Aligned_cols=120  Identities=13%  Similarity=0.128  Sum_probs=83.9

Q ss_pred             eceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCeEEEEEecCCC---CCCCCCCCCCCCceEEE
Q 029285           73 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP---DPLSGRPEHGGRDRHTC  149 (196)
Q Consensus        73 i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~---~~~~~~p~~~~~~~hi~  149 (196)
                      ..++.||.|.|+|+++|++||++ ||+........+.   ...+...++..+.+......   ......+..+++..|++
T Consensus         7 ~~rl~~V~L~V~Dl~~s~~FY~~-lg~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a   82 (149)
T 4gym_A            7 QSRLTFVNLPVADVAASQAFFGT-LGFEFNPKFTDES---CACMVVSEQAFVMLIDRARFADFTSKPIADATATTEAIVC   82 (149)
T ss_dssp             CCCCEEEEEEESCHHHHHHHHHH-TTCEECGGGCBTT---EEEEEEETTEEEEEEEHHHHGGGCSSCBCCTTTCBSCEEE
T ss_pred             CccEEEEEEEeCCHHHHHHHHHH-hCCCcceeecCCc---eeEEeecCcceEeeeccccccccccccCCCCCCCCeeEEE
Confidence            45789999999999999999998 6666655443222   22334445555555543211   11111222344557999


Q ss_pred             EEEC---CHHHHHHHHHHCCCeEEeeC---CCceEEEEEcCCCCeEEEEeecC
Q 029285          150 IAIR---DVSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQVDG  196 (196)
Q Consensus       150 f~v~---dl~~~~~~l~~~G~~~~~~~---~g~~~~~~~DPdG~~iEl~e~~~  196 (196)
                      |.|+   +++++++++.+.|+.+..++   .+++.+||+|||||.|||++++|
T Consensus        83 ~~v~~~~~vd~~~~~~~~~g~~~~~~p~~~~~~~~~~f~DPDGn~iEi~~~~p  135 (149)
T 4gym_A           83 VSAIDRDDVDRFADTALGAGGTVARDPMDYGFMYGRSFHDLDGHLWEVMWMSA  135 (149)
T ss_dssp             EECSSHHHHHHHHHHHHHTTCEECSCCEECSSEEEEEEECTTCCEEEEEEECT
T ss_pred             EEeccHHHHHHHHHHHHhcCceeeccccccCCEEEEEEEcCCCCEEEEEEECh
Confidence            9997   67788999999999986543   45789999999999999998765

>1xrk_A Bleomycin resistance protein; arm exchange, ligand binding protein, thermostable mutant, antibiotic inhibitor; HET: BLM; 1.50A {Streptoalloteichus hindustanus} SCOP: d.32.1.2 PDB: 2zhp_A* 1byl_A

Probab=99.78  E-value=9.8e-18  Score=120.45  Aligned_cols=107  Identities=12%  Similarity=0.156  Sum_probs=85.1

Q ss_pred             ceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEEEEC
Q 029285           74 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR  153 (196)
Q Consensus        74 ~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~p~~~~~~~hi~f~v~  153 (196)
                      ....|+.|.|+|++++++||+++|||++....+      ..+++..++..++|.......        .++..|++|.|+
T Consensus         4 ~~~~~~~l~v~D~~~a~~FY~~~lG~~~~~~~~------~~~~~~~~~~~l~l~~~~~~~--------~~~~~~~~~~v~   69 (124)
T 1xrk_A            4 LTSAVPVLTARDVAEAVEFWTDRLGFSRVFVED------DFAGVVRDDVTLFISAVQDQV--------VPDNTQAWVWVR   69 (124)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHHTTCCEEEEECS------SEEEEEETTEEEEEEECSCTT--------TGGGCEEEEEEE
T ss_pred             ccceeEEEEcCCHHHHHHHHHHccCceEEecCC------CEEEEEECCEEEEEEcCCCCC--------CCCceEEEEEEC
Confidence            456899999999999999999999999987521      235677788888887654311        123469999999


Q ss_pred             CHHHHHHHHHHC------CC--eEEee----CCCceEEEEEcCCCCeEEEEeec
Q 029285          154 DVSKLKMILDKA------GI--SYTLS----KSGRPAIFTRDPDANALEFTQVD  195 (196)
Q Consensus       154 dl~~~~~~l~~~------G~--~~~~~----~~g~~~~~~~DPdG~~iEl~e~~  195 (196)
                      |+++++++|+++      |+  ++..+    +.| +.++++|||||.|||.+..
T Consensus        70 dv~~~~~~l~~~~~~~~~G~~~~~~~~~~~~~~g-~~~~~~DPdG~~iel~~~~  122 (124)
T 1xrk_A           70 GLDELYAEWSEVVSTNFRDASGPAMTEIVEQPWG-REFALRDPAGNCVHFVAEE  122 (124)
T ss_dssp             CHHHHHHHHTTTSBSCTTTCSSCEECCCEEETTE-EEEEEECTTCCEEEEEEC-
T ss_pred             CHHHHHHHHHHhcccccCCccccccCCceecCCC-CEEEEECCCCCEEEEEEec
Confidence            999999999999      99  76543    245 8999999999999999853

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2

Probab=99.78  E-value=2.4e-18  Score=122.05  Aligned_cols=108  Identities=18%  Similarity=0.209  Sum_probs=82.0

Q ss_pred             ceeceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCC---eEEEEEecCCCCCCCCCCCCCCCceE
Q 029285           71 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA---EMIHLMELPNPDPLSGRPEHGGRDRH  147 (196)
Q Consensus        71 ~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~---~~l~l~~~~~~~~~~~~p~~~~~~~h  147 (196)
                      |.+.++ |+.|.|+|++++++||+++|||++... +  .   ..+++..++   ..+.+.....         ..+...|
T Consensus         4 m~i~~i-~v~l~v~d~~~a~~FY~~~lG~~~~~~-~--~---~~~~~~~~~~~~~~l~l~~~~~---------~~~~~~~   67 (119)
T 2pjs_A            4 MAVRRV-VANIATPEPARAQAFYGDILGMPVAMD-H--G---WIVTHASPLEAHAQVSFAREGG---------SGTDVPD   67 (119)
T ss_dssp             -CEEEE-EEEEECSCGGGGHHHHTTTTCCCEEEE-C--S---SEEEEEEEEEEEEEEEEESSSB---------TTBCCCS
T ss_pred             cceeEE-EEEEEcCCHHHHHHHHHHhcCCEEEec-C--C---EEEEEecCCCCcEEEEEEcCCC---------CCCceeE
Confidence            557788 999999999999999999999998864 1  1   234555542   2444443211         1124569


Q ss_pred             EEEEECCHHHHHHHHHHCCCeEEee----CCCceEEEEEcCCCCeEEEEee
Q 029285          148 TCIAIRDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  194 (196)
Q Consensus       148 i~f~v~dl~~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdG~~iEl~e~  194 (196)
                      ++|.|+|+++++++|+++|+++..+    +.|.+.++++|||||.|||.+.
T Consensus        68 ~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~  118 (119)
T 2pjs_A           68 LSIEVDNFDEVHARILKAGLPIEYGPVTEAWGVQRLFLRDPFGKLINILSH  118 (119)
T ss_dssp             EEEEESCHHHHHHHHHHTTCCCSEEEEECTTSCEEEEEECTTSCEEEEEEC
T ss_pred             EEEEECCHHHHHHHHHHCCCccccCCccCCCccEEEEEECCCCCEEEEEec
Confidence            9999999999999999999987443    3466899999999999999985

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens}

Probab=99.77  E-value=4e-18  Score=126.10  Aligned_cols=114  Identities=16%  Similarity=0.215  Sum_probs=88.2

Q ss_pred             ceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeC-CeEEEEEecCCCCCCCCCCCCCCCceEEEEEE
Q 029285           74 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-AEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  152 (196)
Q Consensus        74 ~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g-~~~l~l~~~~~~~~~~~~p~~~~~~~hi~f~v  152 (196)
                      .++.|+.|.|+|++++++||+++|||++..+.+      ..+++..+ +..+.|+......+.   +..+.+..|++|.|
T Consensus        24 ~~l~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~------~~~~~~~~~~~~l~l~~~~~~~~~---~~~~~~~~hl~f~v   94 (144)
T 2kjz_A           24 THPDFTILYVDNPPASTQFYKALLGVDPVESSP------TFSLFVLANGMKLGLWSRHTVEPK---ASVTGGGGELAFRV   94 (144)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHHHTCCCSEEET------TEEEEECTTSCEEEEEETTSCSSC---CCCSSSSCEEEEEC
T ss_pred             CceeEEEEEeCCHHHHHHHHHHccCCEeccCCC------CeEEEEcCCCcEEEEEeCCCCCCc---cCCCCCceEEEEEe
Confidence            389999999999999999999999999886542      13667776 467888765432211   12234678999999


Q ss_pred             C---CHHHHHHHHHHCCCeEEeeC---CCceEEEEEcCCCCeEEEEeecC
Q 029285          153 R---DVSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQVDG  196 (196)
Q Consensus       153 ~---dl~~~~~~l~~~G~~~~~~~---~g~~~~~~~DPdG~~iEl~e~~~  196 (196)
                      +   |+++++++|+++|+++..++   ..++.++|+|||||.|||.+..+
T Consensus        95 ~d~~dv~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~DPdG~~iel~~~~g  144 (144)
T 2kjz_A           95 ENDAQVDETFAGWKASGVAMLQQPAKMEFGYTFTAADPDSHRLRVYAFAG  144 (144)
T ss_dssp             SSHHHHHHHHHHHHHTTCCCCSCCEEETTEEEEEECCTTCCEEEEEEECC
T ss_pred             CCHHHHHHHHHHHHHCCCeEecCceecCCceEEEEECCCCCEEEEEecCC
Confidence            8   57999999999999875432   23488999999999999999764

>3fcd_A Lyase, ORF125EGC139; lactoylglutathione lyase, YECM, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.92A {Uncultured bacterium} SCOP: d.32.1.0

Probab=99.77  E-value=1.6e-17  Score=121.06  Aligned_cols=111  Identities=22%  Similarity=0.273  Sum_probs=83.5

Q ss_pred             eeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEEEECC
Q 029285           75 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD  154 (196)
Q Consensus        75 ~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~p~~~~~~~hi~f~v~d  154 (196)
                      .-.+..|.|+|+++|++||+++|||++..+.+      ..+++..++..++|........   .|. +.+..|++|.|+|
T Consensus         7 ~~~~~~l~v~D~~~a~~FY~~~LG~~~~~~~~------~~~~l~~~~~~l~l~~~~~~~~---~~~-~~~~~~l~~~v~d   76 (134)
T 3fcd_A            7 HQITPFLHIPDMQEALTLFCDTLGFELKYRHS------NYAYLELSGCGLRLLEEPARKI---IPD-GIARVAICIDVSD   76 (134)
T ss_dssp             CEEEEEEEESCHHHHHHHHTTTTCCEEEEEET------TEEEEEETTEEEEEEECCCC-------------EEEEEECSC
T ss_pred             hcceeEEEECCHHHHHHHHHhccCcEEEEeCC------CeEEEEECCEEEEEEeCCCCCc---CCC-CCceEEEEEEeCC
Confidence            34567899999999999999999999987643      2477888888899887654321   121 2234699999999


Q ss_pred             HHHHHHHHHHCCC----eEE----eeCCCceEEEEEcCCCCeEEEEeec
Q 029285          155 VSKLKMILDKAGI----SYT----LSKSGRPAIFTRDPDANALEFTQVD  195 (196)
Q Consensus       155 l~~~~~~l~~~G~----~~~----~~~~g~~~~~~~DPdG~~iEl~e~~  195 (196)
                      +++++++|+++|+    ++.    ..++|.+.++|+|||||.|||.+..
T Consensus        77 v~~~~~~l~~~g~~~g~~i~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  125 (134)
T 3fcd_A           77 IDSLHTKLSPALENLPADQVEPLKNMPYGQREFQVRMPDGDWLNFTAPL  125 (134)
T ss_dssp             HHHHHHHHHHHHTTSCGGGEEEEEECTTSEEEEEEECTTSCEEEEEEEC
T ss_pred             HHHHHHHHHhcCCccCCccccCCcccCCCcEEEEEECCCCCEEEEEEcc
Confidence            9999999996654    322    2345668999999999999999875

>2r6u_A Uncharacterized protein; structural genomics, PSI-2, RHA04853, MCSG, protein structur initiative, midwest center for structural genomics; 1.50A {Rhodococcus SP}

Probab=99.77  E-value=2.9e-18  Score=127.53  Aligned_cols=116  Identities=16%  Similarity=0.147  Sum_probs=85.1

Q ss_pred             ceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCeEEEEEecCCCCCCCC---CCCCCCCceEEEE
Q 029285           74 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSG---RPEHGGRDRHTCI  150 (196)
Q Consensus        74 ~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~---~p~~~~~~~hi~f  150 (196)
                      .++.|+.|.|.|++++++||+++|||++... +.    ...+++..++..++|+....+.....   .+. ..+ .|++|
T Consensus        24 ~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~-~~----~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~-~~g-~~l~f   96 (148)
T 2r6u_A           24 GRIVHFEIPFDDGDRARAFYRDAFGWAIAEI-PD----MDYSMVTTGPVGESGMPDEPGYINGGMMQRGE-VTT-PVVTV   96 (148)
T ss_dssp             CCEEEEEEEESSHHHHHHHHHHHHCCEEEEE-TT----TTEEEEECSCBCTTSSBCSSSCBCEEEEESSS-SCS-CEEEE
T ss_pred             CceEEEEEEeCCHHHHHHHHHHccCcEEEEC-CC----CCEEEEEeCCcceeecccCCcccccceeecCC-CCe-EEEEE
Confidence            6899999999999999999999999999873 21    13467777765444433322110000   011 123 49999


Q ss_pred             EECCHHHHHHHHHHCCCeEEeeC---C-CceEEEEEcCCCCeEEEEeecC
Q 029285          151 AIRDVSKLKMILDKAGISYTLSK---S-GRPAIFTRDPDANALEFTQVDG  196 (196)
Q Consensus       151 ~v~dl~~~~~~l~~~G~~~~~~~---~-g~~~~~~~DPdG~~iEl~e~~~  196 (196)
                      .|+|+++++++|+++|+++..++   . .++.++|+|||||.|||.+..+
T Consensus        97 ~v~dld~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~DPdG~~iel~~~~~  146 (148)
T 2r6u_A           97 DVESIESALERIESLGGKTVTGRTPVGNMGFAAYFTDSEGNVVGLWETAR  146 (148)
T ss_dssp             ECSCHHHHHHHHHHTTCEEEEEEEEETTTEEEEEEECTTSCEEEEEEECC
T ss_pred             EcCCHHHHHHHHHHcCCeEecCCeecCCCEEEEEEECCCCCEEEEEecCC
Confidence            99999999999999999986542   2 2589999999999999999753

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans}

Probab=99.77  E-value=7e-18  Score=123.62  Aligned_cols=116  Identities=17%  Similarity=0.118  Sum_probs=85.1

Q ss_pred             eeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCeEEEEEecCC---CCCCCCCCCCCCCceEEEEE
Q 029285           75 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPN---PDPLSGRPEHGGRDRHTCIA  151 (196)
Q Consensus        75 ~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~---~~~~~~~p~~~~~~~hi~f~  151 (196)
                      ++.|+.|.|+|++++++||+++|||++..+.+.+.    .+++..++..+.+.....   .......+..+.+ .|++|.
T Consensus         8 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~----~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~-~~~~f~   82 (141)
T 2rbb_A            8 DLSYVNIFTRDIVAMSAFYQQVFGFQEIESIRSPI----FRGLDTGKSCIGFNAHEAYELMQLAQFSETSGIK-FLLNFD   82 (141)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEECGGGCBTT----EEEEECSSSEEEEECTHHHHHTTCGGGCCCBSCC-EEEEEE
T ss_pred             cccEEEEEECCHHHHHHHHHHhcCCeeecccCCCc----eEEeecCCEEEEEcCccccccccccccCCCCCCe-EEEEEE
Confidence            89999999999999999999999999875432221    355666776777654210   0000000112233 599999


Q ss_pred             EC---CHHHHHHHHHHCCCeEEeeC----CCceEEEEEcCCCCeEEEEeec
Q 029285          152 IR---DVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQVD  195 (196)
Q Consensus       152 v~---dl~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~iEl~e~~  195 (196)
                      |+   |+++++++|+++|+++..++    +|.+.++|+|||||.|||.+..
T Consensus        83 v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  133 (141)
T 2rbb_A           83 VDTKEAVDKLVPVAIAAGATLIKAPYETYYHWYQAVLLDPERNVFRINNVL  133 (141)
T ss_dssp             CSCHHHHHHHHHHHHHTTCEEEEEEEECTTSEEEEEEECTTSCEEEEEEEC
T ss_pred             cCCHHHHHHHHHHHHHcCCeEecCccccCCccEEEEEECCCCCEEEEEEcc
Confidence            99   59999999999999875442    4679999999999999999864

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei}

Probab=99.77  E-value=3.2e-18  Score=126.94  Aligned_cols=114  Identities=14%  Similarity=0.241  Sum_probs=84.1

Q ss_pred             ceeceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEE
Q 029285           71 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI  150 (196)
Q Consensus        71 ~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~p~~~~~~~hi~f  150 (196)
                      |.+.++. +.|.|+|++++++||+++|||++..+........  .....++  ++++.......      ...+..|++|
T Consensus         3 M~i~~i~-i~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~--~~~~~~~--~~l~~~~~~~~------~~~~~~hl~f   71 (144)
T 3r6a_A            3 MKILQIL-SRLYVADLNPALEFYEELLETPVAMRFEIPQTGV--ELAQIST--ILLIAGSEEAL------KPFRNTQATF   71 (144)
T ss_dssp             CCEEEEE-EEEEESCHHHHHHHHHHHTTCCCCEECCCSCSSC--EEEEETT--EEEEESCHHHH------GGGGGCCEEE
T ss_pred             EEEEEEE-EEEEECCHHHHHHHHHHhcCCEEEEEeccCCccE--EEEEecc--EEEecCCcccC------CCCcceEEEE
Confidence            4466777 9999999999999999999999887654322222  2233444  55555431110      1124479999


Q ss_pred             EECCHHHHHHHHHHCCCeEEeeC---CCceEEEEEcCCCCeEEEEeec
Q 029285          151 AIRDVSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQVD  195 (196)
Q Consensus       151 ~v~dl~~~~~~l~~~G~~~~~~~---~g~~~~~~~DPdG~~iEl~e~~  195 (196)
                      .|+|+++++++|+++|+++..++   ..++.++|+|||||.|||.|..
T Consensus        72 ~V~d~d~~~~~l~~~G~~v~~~p~~~~~G~~~~~~DPdG~~iel~~~~  119 (144)
T 3r6a_A           72 LVDSLDKFKTFLEENGAEIIRGPSKVPTGRNMTVRHSDGSVIEYVEHS  119 (144)
T ss_dssp             EESCHHHHHHHHHHTTCEEEEEEEEETTEEEEEEECTTSCEEEEEEEC
T ss_pred             EeCCHHHHHHHHHHcCCEEecCCccCCCceEEEEECCCCCEEEEEEcC
Confidence            99999999999999999986542   3348899999999999999865

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2

Probab=99.76  E-value=6.9e-18  Score=118.75  Aligned_cols=106  Identities=16%  Similarity=0.229  Sum_probs=82.5

Q ss_pred             ceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCC-eEEEEEecCCCCCCCCCCCCCCCceEEEEEE
Q 029285           74 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA-EMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  152 (196)
Q Consensus        74 ~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~-~~l~l~~~~~~~~~~~~p~~~~~~~hi~f~v  152 (196)
                      ++++|+.|.|+|++++++||+++|||++....+  .   ..+|+..++ ..+.+......      +  .++..|++|.|
T Consensus         2 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~--~---~~~~~~~~~~~~l~l~~~~~~------~--~~~~~~~~~~v   68 (113)
T 1xqa_A            2 MGIKHLNLTVADVVAAREFLEKYFGLTCSGTRG--N---AFAVMRDNDGFILTLMKGKEV------Q--YPKTFHVGFPQ   68 (113)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHHHCCEEEEEET--T---TEEEEECTTCCEEEEEECSSC------C--CCTTCCEEEEC
T ss_pred             CeeEEEEEEeCCHHHHHHHHHHhCCCEEeccCC--C---cEEEEEcCCCcEEEEEeCCCC------C--CCceeEEEEEc
Confidence            468999999999999999999999999886432  1   236777654 56777764321      1  13567999999


Q ss_pred             ---CCHHHHHHHHHHCCCeEEeeC-CCceEEEEEcCCCCeEEEE
Q 029285          153 ---RDVSKLKMILDKAGISYTLSK-SGRPAIFTRDPDANALEFT  192 (196)
Q Consensus       153 ---~dl~~~~~~l~~~G~~~~~~~-~g~~~~~~~DPdG~~iEl~  192 (196)
                         +|+++++++|+++|+++..+. .+++.++++|||||.|||.
T Consensus        69 ~~~~d~~~~~~~l~~~G~~~~~p~~~~~~~~~~~DPdG~~iel~  112 (113)
T 1xqa_A           69 ESEEQVDKINQRLKEDGFLVEPPKHAHAYTFYVEAPGGFTIEVM  112 (113)
T ss_dssp             SSHHHHHHHHHHHHHTTCCCCCCEEC-CEEEEEEETTTEEEEEE
T ss_pred             CCHHHHHHHHHHHHHCCCEEecCcCCCcEEEEEECCCCcEEEEe
Confidence               799999999999999875321 2268899999999999996

>1ecs_A Bleomycin resistance protein; arm-exchange, antibiotic inhibitor; HET: PG4; 1.70A {Klebsiella pneumoniae} SCOP: d.32.1.2 PDB: 1ewj_A* 1niq_B* 1mh6_A

Probab=99.75  E-value=1e-16  Score=115.28  Aligned_cols=106  Identities=20%  Similarity=0.271  Sum_probs=84.1

Q ss_pred             eeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEEEECCH
Q 029285           76 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDV  155 (196)
Q Consensus        76 l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~p~~~~~~~hi~f~v~dl  155 (196)
                      ..++.|.|+|++++++||++ |||++..+.   .   ..+++..++..++|...+...     +  ..+..|++|.|+|+
T Consensus         4 ~~~~~l~v~D~~~a~~FY~~-LG~~~~~~~---~---~~~~~~~~~~~l~l~~~~~~~-----~--~~~~~~~~~~v~dv   69 (126)
T 1ecs_A            4 QATPNLPSRDFDSTAAFYER-LGFGIVFRD---A---GWMILQRGDLMLEFFAHPGLD-----P--LASWFSCCLRLDDL   69 (126)
T ss_dssp             EEEEEEEESCHHHHHHHHHT-TTCEEEEEC---S---SEEEEEETTEEEEEEECTTCC-----G--GGCCCEEEEEESCH
T ss_pred             cEEEEEEeCCHHHHHHHHHH-CCCEEEecC---C---CEEEEEeCCEEEEEEeCCCCC-----C--CCcceEEEEEECCH
Confidence            46899999999999999998 999998651   1   246677888888887653311     1  13557999999999


Q ss_pred             HHHHHHHHHCCCeE-------Eee----CCCceEEEEEcCCCCeEEEEeec
Q 029285          156 SKLKMILDKAGISY-------TLS----KSGRPAIFTRDPDANALEFTQVD  195 (196)
Q Consensus       156 ~~~~~~l~~~G~~~-------~~~----~~g~~~~~~~DPdG~~iEl~e~~  195 (196)
                      ++++++|+++|+++       ..+    ++|.+.++++|||||.|||.+..
T Consensus        70 ~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  120 (126)
T 1ecs_A           70 AEFYRQCKSVGIQETSSGYPRIHAPELQGWGGTMAALVDPDGTLLRLIQNE  120 (126)
T ss_dssp             HHHHHHHHHTTCCBCSSSSSEEEEEEECTTSSEEEEEECTTSCEEEEEECC
T ss_pred             HHHHHHHHHCCCccccccCccccCCcccCcccEEEEEECCCCCEEEEecch
Confidence            99999999999983       322    24668999999999999999864

>1qto_A Bleomycin-binding protein; arm-exchange, antibiotic inhibitor; 1.50A {Streptomyces verticillus} SCOP: d.32.1.2 PDB: 1jie_A* 1jif_A

Probab=99.74  E-value=2.1e-17  Score=118.35  Aligned_cols=104  Identities=17%  Similarity=0.197  Sum_probs=82.9

Q ss_pred             eeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEEEECCH
Q 029285           76 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDV  155 (196)
Q Consensus        76 l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~p~~~~~~~hi~f~v~dl  155 (196)
                      ..++.|.|.|++++++||+++|||++....+      ..+++..++..++|......      +  .+...|++|.|+|+
T Consensus         6 ~~~~~l~v~D~~~a~~FY~~~LG~~~~~~~~------~~~~~~~~~~~l~l~~~~~~------~--~~~~~~~~~~v~dv   71 (122)
T 1qto_A            6 GAVPVLTAVDVPANVSFWVDTLGFEKDFGDR------DFAGVRRGDIRLHISRTEHQ------I--VADNTSAWIEVTDP   71 (122)
T ss_dssp             CCCCEEEESSHHHHHHHHHHTTCCEEEEECS------SEEEEEETTEEEEEEECSCH------H--HHTTCEEEEEESCH
T ss_pred             ceeEEEEcCCHHHHHHHHHhccCcEEeeCCC------CEEEEEECCEEEEEEcCCCC------C--CCCceEEEEEECCH
Confidence            3578999999999999999999999986521      24667788888888764321      1  11236999999999


Q ss_pred             HHHHHHHHHC------CC--eEEee----CCCceEEEEEcCCCCeEEEEee
Q 029285          156 SKLKMILDKA------GI--SYTLS----KSGRPAIFTRDPDANALEFTQV  194 (196)
Q Consensus       156 ~~~~~~l~~~------G~--~~~~~----~~g~~~~~~~DPdG~~iEl~e~  194 (196)
                      ++++++|+++      |+  .+..+    +.| +.++++|||||.|||.+.
T Consensus        72 d~~~~~l~~~~~~~~~G~~~~~~~~~~~~~~g-~~~~~~DPdG~~iel~~~  121 (122)
T 1qto_A           72 DALHEEWARAVSTDYADTSGPAMTPVGESPAG-REFAVRDPAGNCVHFTAG  121 (122)
T ss_dssp             HHHHHHHTTTSCSCTTCTTSCEECCCEEETTE-EEEEEECTTSCEEEEEEC
T ss_pred             HHHHHHHHhhccccccCccccccCCCcCCCCC-cEEEEECCCCCEEEEecC
Confidence            9999999999      99  76543    245 889999999999999985

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8

Probab=99.74  E-value=1.7e-17  Score=121.30  Aligned_cols=116  Identities=12%  Similarity=0.144  Sum_probs=83.5

Q ss_pred             eeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCe--EEEEEecCCCCCCCCCCCCCCCceEEEEEE
Q 029285           75 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHTCIAI  152 (196)
Q Consensus        75 ~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~--~l~l~~~~~~~~~~~~p~~~~~~~hi~f~v  152 (196)
                      ...||.|.|+|++++++||+++|||++..+.+. ...+..+++..++.  .+++........    ...+.+..|++|.|
T Consensus        11 ~~~~i~l~v~Dl~~s~~FY~~~LG~~~~~~~~~-~~~~~~~~~~~~~~~~~l~l~~~~~~~~----~~~~~~~~hi~~~v   85 (139)
T 1twu_A           11 AQIRIARPTGQLDEIIRFYEEGLCLKRIGEFSQ-HNGYDGVMFGLPHADYHLEFTQYEGGST----APVPHPDSLLVFYV   85 (139)
T ss_dssp             SCEEEEEECSCHHHHHHHHTTTSCCCEEEEEEE-ETTEEEEEEESSSSSEEEEEEEETTCCC----CCCCCTTCEEEEEC
T ss_pred             ceeEEeeEeCCHHHHHHHHHhcCCcEEEEeccC-CCCeeEEEEecCCCceEEEEeecCCCCC----CCCCCCccEEEEEe
Confidence            457899999999999999999999998865432 12345567776643  466655433211    11234568999999


Q ss_pred             CCH---HHHHHHHHHCCCeEEe--eC-CCceEEEEEcCCCCeEEEEeec
Q 029285          153 RDV---SKLKMILDKAGISYTL--SK-SGRPAIFTRDPDANALEFTQVD  195 (196)
Q Consensus       153 ~dl---~~~~~~l~~~G~~~~~--~~-~g~~~~~~~DPdG~~iEl~e~~  195 (196)
                      +|+   ++++++|+++|+.+..  .+ .+....||+|||||.|||.+..
T Consensus        86 ~d~~~l~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~DPdG~~iel~~~~  134 (139)
T 1twu_A           86 PNAVELAAITSKLKHMGYQEVESENPYWSNGGVTIEDPDGWRIVFMNSK  134 (139)
T ss_dssp             CCHHHHHHHHHHHHHTTCCEECCSSHHHHSSEEEEECTTCCEEEEESSC
T ss_pred             CCcchHHHHHHHHHHcCCcCcCCCCcccCCCCeEEECCCCCEEEEEEcC
Confidence            999   9999999999999873  21 1112247999999999999753

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus}

Probab=99.74  E-value=4.6e-17  Score=119.85  Aligned_cols=114  Identities=18%  Similarity=0.238  Sum_probs=83.0

Q ss_pred             eEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCeEEEEEecCCCCC-C---CCCCCCCCCceEEEEEE
Q 029285           77 HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP-L---SGRPEHGGRDRHTCIAI  152 (196)
Q Consensus        77 ~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~-~---~~~p~~~~~~~hi~f~v  152 (196)
                      ..+.|.|+|+++|++||+++|||++....+..    ..+++..++..++|........ .   ...+..+.+. +++|.|
T Consensus         7 ~~~~l~v~Dl~~s~~FY~~~LG~~~~~~~~~~----~~~~l~~g~~~l~l~~~~~~~~~~~~~~~~~~~~~g~-~~~~~v   81 (145)
T 2rk9_A            7 VVPELYCFDINVSQSFFVDVLGFEVKYERPDE----EFVYLTLDGVDVMLEGIAGKSRKWLSGDLEFPLGSGV-NFQWDV   81 (145)
T ss_dssp             EEEEEEESSHHHHHHHHHHTTCCEEEEEEGGG----TEEEEEETTEEEEEEEC-----------CCSSTTTTE-EEEEEC
T ss_pred             ceEEEEECCHHHHHHHHHhccCCEEEeecCCC----CEEEEEcCCeEEEEEeccCCCcccccCccccCCCCce-EEEEEE
Confidence            46899999999999999999999998533221    2367888888888886532111 0   0111122344 499999


Q ss_pred             CCHHHHHHHHHH-CCCeEEeeC-----------CCceEEEEEcCCCCeEEEEeec
Q 029285          153 RDVSKLKMILDK-AGISYTLSK-----------SGRPAIFTRDPDANALEFTQVD  195 (196)
Q Consensus       153 ~dl~~~~~~l~~-~G~~~~~~~-----------~g~~~~~~~DPdG~~iEl~e~~  195 (196)
                      +|+++++++|++ +|+++..++           .+++.++|+|||||.|||.+..
T Consensus        82 ~dvd~~~~~l~~~~G~~~~~~~~~~~~g~~~~~~~~~~~~~~DPdG~~iel~~~~  136 (145)
T 2rk9_A           82 IDIEPLYQRVNESAADSIYLALESKSYQCGDSIATQKQFMVQTPDGYLFRFCQDI  136 (145)
T ss_dssp             SCHHHHHHHHHHHHGGGEEEEEEEEEC-----CCEEEEEEEECTTCCEEEEEEC-
T ss_pred             CCHHHHHHHHHhhCCCeEecCccccccccCCCCCcceEEEEECCCCCEEEEEEcC
Confidence            999999999999 999875432           2358899999999999999864

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp}

Probab=99.73  E-value=7.2e-17  Score=135.45  Aligned_cols=122  Identities=16%  Similarity=0.256  Sum_probs=92.6

Q ss_pred             ceeceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCC-CCceeEEEEeC----CeEEEEEecCCCCCCCCCCCCCCCc
Q 029285           71 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDK-LPYRGAWLWVG----AEMIHLMELPNPDPLSGRPEHGGRD  145 (196)
Q Consensus        71 ~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~-~~~~~~~l~~g----~~~l~l~~~~~~~~~~~~p~~~~~~  145 (196)
                      |++.+++||+|.|+|++++++||+++|||++..+....+ ......++...    +..++|+..+....  ..+ ..++.
T Consensus         4 ~~i~~i~Hv~l~v~Dl~~s~~FY~~vLGl~~v~~~~~~~~~~~~~l~~~~~~g~~g~~l~l~~~~~~~~--~~~-~~~~~   80 (335)
T 3oaj_A            4 KKTMGIHHITAIVGHPQENTDFYAGVLGLRLVKQTVNFDDPGTYHLYFGNEGGKPGTIITFFPWAGARQ--GVI-GDGQV   80 (335)
T ss_dssp             CCCCSEEEEEEEESCHHHHHHHHTTTTCCEEEEEEECSSCTTSEEEEEESTTCCTTSEEEEEECTTCCB--CBC-CBSEE
T ss_pred             ccCCcccEEEEEeCCHHHHHHHHHHhcCCEEEeeecCCCCCceEEEEEecCCCCCCcEEEEEECCCCCC--CCC-CCCce
Confidence            457899999999999999999999999999987643221 12223344432    45788887654321  111 12467


Q ss_pred             eEEEEEEC--CHHHHHHHHHHCCCeEEe-eCCCceEEEEEcCCCCeEEEEeec
Q 029285          146 RHTCIAIR--DVSKLKMILDKAGISYTL-SKSGRPAIFTRDPDANALEFTQVD  195 (196)
Q Consensus       146 ~hi~f~v~--dl~~~~~~l~~~G~~~~~-~~~g~~~~~~~DPdG~~iEl~e~~  195 (196)
                      .|++|.|+  |+++++++|+++|+++.. ...+.+.+||+|||||.|||++..
T Consensus        81 ~hiaf~V~~~dl~~~~~rL~~~Gv~~~~~~~~g~~~~~f~DPdGn~iEl~~~~  133 (335)
T 3oaj_A           81 GVTSYVVPKGAMAFWEKRLEKFNVPYTKIERFGEQYVEFDDPHGLHLEIVERE  133 (335)
T ss_dssp             EEEEEEECTTCHHHHHHHHHHTTCCCEEEEETTEEEEEEECTTSCEEEEEECS
T ss_pred             EEEEEEecHHHHHHHHHHHHhCcceeeeeccCCcEEEEEECCCCCEEEEEEeC
Confidence            89999999  999999999999998764 345678999999999999999864

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str}

Probab=99.71  E-value=2.5e-17  Score=120.23  Aligned_cols=115  Identities=18%  Similarity=0.159  Sum_probs=80.4

Q ss_pred             ceeceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCeEEEE-----Ee-cCCCCCCCCCCCCCCC
Q 029285           71 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHL-----ME-LPNPDPLSGRPEHGGR  144 (196)
Q Consensus        71 ~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~l~l-----~~-~~~~~~~~~~p~~~~~  144 (196)
                      +.+++++|+.|.|+|++++++||+++|||++....+  .    .+++. .+..++.     .. .+....  ..+..+.+
T Consensus         4 ~~~~~l~~v~l~v~D~~~a~~FY~~~LG~~~~~~~~--~----~~~~~-~g~~l~~~~~~~~~~~~~~~~--~~~~~~~~   74 (141)
T 2qnt_A            4 FQGMRFVNPIPFVRDINRSKSFYRDRLGLKILEDFG--S----FVLFE-TGFAIHEGRSLEETIWRTSSD--AQEAYGRR   74 (141)
T ss_dssp             CCSCCCCCCCCEESCHHHHHHHHHHTTCCCEEEECS--S----EEEET-TSCEEEEHHHHHHHHHSCCC----CCCSCCS
T ss_pred             ccccccceEEEEECCHHHHHHHHHHhcCCEEEEEcC--C----cEEEe-ccceeccCchhhhhccccCCc--cccccCCC
Confidence            345789999999999999999999999999886432  1    12232 2333331     01 010100  11122346


Q ss_pred             ceEEEEEECCHHHHHHHHHHCCCeEEee----CCCceEEEEEcCCCCeEEEEeec
Q 029285          145 DRHTCIAIRDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVD  195 (196)
Q Consensus       145 ~~hi~f~v~dl~~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdG~~iEl~e~~  195 (196)
                      ..|++|.|+|+++++++|++ |+++..+    +.|.+.++++|||||.|||.+..
T Consensus        75 ~~~~~~~v~dv~~~~~~l~~-G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  128 (141)
T 2qnt_A           75 NMLLYFEHADVDAAFQDIAP-HVELIHPLERQAWGQRVFRFYDPDGHAIEVGESL  128 (141)
T ss_dssp             SCEEEEEESCHHHHHC-CGG-GSCEEEEEEECTTSCEEEEEECTTCCEEEEEECC
T ss_pred             ceEEEEEeCcHHHHHHHHHc-CCccccCCccCCCCCEEEEEECCCCCEEEEEecc
Confidence            68999999999999999999 9987543    24568999999999999999863

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii}

Probab=99.69  E-value=1.7e-16  Score=132.95  Aligned_cols=116  Identities=14%  Similarity=0.183  Sum_probs=90.1

Q ss_pred             CceeceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCe--EEEEEecCCCCCCCCCCCCCCCceE
Q 029285           70 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRH  147 (196)
Q Consensus        70 ~~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~--~l~l~~~~~~~~~~~~p~~~~~~~h  147 (196)
                      ++.+.+++||+|.|+|++++++||+++|||++..... +......+|+..++.  .+.+.....+        ..++.+|
T Consensus       148 g~~~~~l~Hv~l~v~D~~~a~~FY~~vLG~~~~~~~~-~~g~~~~~~l~~~~~~~~l~~~~~~~~--------~~~~~~H  218 (339)
T 3lm4_A          148 GIPVKRIDHLNLMSSDVTAVKDSFERHLGFRTTERVV-DGNVEIGAWMSSNLLGHEVACMRDMTG--------GHGKLHH  218 (339)
T ss_dssp             SSCCCEEEEEEEEESCHHHHHHHHHHHHCCEEEEEEE-ETTEEEEEEEESSSSSCSEEEEECTTS--------CCSEEEE
T ss_pred             CCCcceeeeEEEEcCCHHHHHHHHHHhCCCeEEEEEe-cCCcEEEEEEEeCCCceEEEEeccCCC--------CCCceeE
Confidence            4578999999999999999999999999999987654 222235678887653  5666652111        1246899


Q ss_pred             EEEEECC---HHHHHHHHHHCCCeEEeeC-----CCceEEEEEcCCCCeEEEEee
Q 029285          148 TCIAIRD---VSKLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQV  194 (196)
Q Consensus       148 i~f~v~d---l~~~~~~l~~~G~~~~~~~-----~g~~~~~~~DPdG~~iEl~e~  194 (196)
                      ++|.|+|   +++++++|+++|+++...+     .+.+.+|++|||||.|||++.
T Consensus       219 iaf~v~d~~~v~~~~~~l~~~G~~i~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~  273 (339)
T 3lm4_A          219 LAFFYGTGQHNIDAVEMFRDYDIQIEAGPDKHGITQSQFLYVFEPGGNRIELFGE  273 (339)
T ss_dssp             EEEECCCHHHHHHHHHHHHHTTCEEEEEEEEETGGGEEEEEEECTTSCEEEEECC
T ss_pred             EEEEeCCHHHHHHHHHHHHHCCCeEEeCCcccccCCceEEEEEcCCCCEEEEEEc
Confidence            9999999   7788999999999987543     225779999999999999853

>3bt3_A Glyoxalase-related enzyme, ARAC type; VOC superfamily, PSI-2, NYSGXRC, structural genomics, prote structure initiative; 2.50A {Clostridium phytofermentans}

Probab=99.69  E-value=4.8e-16  Score=114.86  Aligned_cols=111  Identities=14%  Similarity=0.122  Sum_probs=76.1

Q ss_pred             eceeeEEEEEcCCHHHHHHHHHhccCCEEeee-cCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEE---
Q 029285           73 VVSVHHVGILCENLERSLEFYQNILGLEINEA-RPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHT---  148 (196)
Q Consensus        73 i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~-~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~p~~~~~~~hi---  148 (196)
                      +.++.|+.|.|+|++++++||+++|||++... ...+.    ..++   +..++|. ...+..   .+. .....|+   
T Consensus        19 ~~~~~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~----~~~~---g~~l~l~-~~~~~~---~~~-~~~~~~~~~g   86 (148)
T 3bt3_A           19 VVRENGPVYFTKDMDKTVKWFEEILGWSGDIVARDDEG----FGDY---GCVFDYP-SEVAVA---HLT-PFRGFHLFKG   86 (148)
T ss_dssp             EEEECCCEEEESCHHHHHHHHHHTTCCEEEEEEECTTS----CEEE---EEEESSC-TTTTSC---C---CCCSEEEEES
T ss_pred             eEEeeeEEEEECCHHHHHHHHHhccCCEEEeeeecCCC----ccEE---ccEEEEe-ccCCCc---ccc-cccccceeec
Confidence            67899999999999999999999999998641 22222    2334   3333331 111111   000 0011222   


Q ss_pred             -------EE-EECCHHHHHHHHHHCCCeEEee----CCCceEEEEEcCCCCeEEEEeec
Q 029285          149 -------CI-AIRDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVD  195 (196)
Q Consensus       149 -------~f-~v~dl~~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdG~~iEl~e~~  195 (196)
                             +| .|+|+++++++|+++|+++..+    ++|.+.++++|||||.|||.+..
T Consensus        87 ~~~~~~~~~~~v~dvd~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  145 (148)
T 3bt3_A           87 EPIKGVAGFMMIEGIDALHKYVKENGWDQISDIYTQPWGARECSITTTDGCILRFFESI  145 (148)
T ss_dssp             CCCSSEEEEEEEECHHHHHHHHHHTTCCCBCCCEEETTTEEEEEEECTTSCEEEEEEEC
T ss_pred             cCCCccEEEEEcCCHHHHHHHHHHcCCccccCcccCCCccEEEEEECCCCCEEEEeeec
Confidence                   55 9999999999999999987543    35668899999999999999864

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A*

Probab=99.68  E-value=3.2e-16  Score=126.72  Aligned_cols=109  Identities=18%  Similarity=0.229  Sum_probs=87.6

Q ss_pred             ceeceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEE
Q 029285           71 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI  150 (196)
Q Consensus        71 ~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~p~~~~~~~hi~f  150 (196)
                      ..+.+++||.|.|+|++++++||+++|||++..+.+      ..+++..++..+.|...+..         +.+..|++|
T Consensus        22 ~~~~~l~hV~L~V~Dle~s~~FY~~vLGl~~~~~~~------~~~~L~~g~~~l~l~~~~~~---------~~~~~hiaf   86 (252)
T 3pkv_A           22 GHMTSIKQLTLYTAELDRMLAFYTNMLGAQHVHEQA------DAFTIQLGVSQIQFRAAADG---------TKPFYHIAI   86 (252)
T ss_dssp             ---CCEEEEEEEESCHHHHHHHHHHHHCGGGEEECS------SEEEEEETTEEEEEEECCTT---------CCCCCEEEE
T ss_pred             CcCceEEEEEEEeCCHHHHHHHHHHhcCCEEEEccC------CEEEEEeCCEEEEEEECCCC---------CCCeeEEEE
Confidence            346799999999999999999999999999887543      23678888888888765422         124679999


Q ss_pred             EEC--CHHHHHHHHHHCCCeEEe---------eCCCceEEEEEcCCCCeEEEEeec
Q 029285          151 AIR--DVSKLKMILDKAGISYTL---------SKSGRPAIFTRDPDANALEFTQVD  195 (196)
Q Consensus       151 ~v~--dl~~~~~~l~~~G~~~~~---------~~~g~~~~~~~DPdG~~iEl~e~~  195 (196)
                      .|+  ++++++++|+++ +++..         .+.+.+.+||+|||||.|||++.+
T Consensus        87 ~V~~~dld~~~~rL~~~-v~~~~~~~~~~~~~~~~g~~~~~f~DPdGn~iEl~~~~  141 (252)
T 3pkv_A           87 NIAANHFQEGKAWLSGF-GELLTENDEDQAYFPFFNAYSCYVEDPSGNIIELISRQ  141 (252)
T ss_dssp             EECTTCHHHHHHHHTTS-SCCCCBTTBSCEEETTTTEEEEEEECTTCCEEEEEEES
T ss_pred             EecHHHHHHHHHHHHhc-ceEeccCCccccccccCCeEEEEEECCCCCEEEEEEeC
Confidence            986  799999999999 88854         134679999999999999999864

>3zi1_A Glyoxalase domain-containing protein 4; isomerase; 1.90A {Homo sapiens}

Probab=99.68  E-value=5e-16  Score=129.87  Aligned_cols=117  Identities=12%  Similarity=0.066  Sum_probs=87.8

Q ss_pred             CceeceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCC-----------CCCceeEEEEeC----CeEEEEEecCCCCC
Q 029285           70 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHD-----------KLPYRGAWLWVG----AEMIHLMELPNPDP  134 (196)
Q Consensus        70 ~~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~-----------~~~~~~~~l~~g----~~~l~l~~~~~~~~  134 (196)
                      .|.+++++||+|.|+|++++++||+++|||++..+.+..           ......+|+..+    ...++|....... 
T Consensus        22 ~M~~~~i~Hv~l~V~Dle~s~~FY~~vLGl~~~~~~~~~~~~~a~~~g~~~~~~~~~~l~~~~~~~~~~leL~~~~~~~-  100 (330)
T 3zi1_A           22 SMAARRALHFVFKVGNRFQTARFYRDVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMVGFGPEDDHFVAELTYNYGVG-  100 (330)
T ss_dssp             GCSCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEEC---------CCCSCEEEEEEESSCTTTCCEEEEEEETTCC-
T ss_pred             ecccceeeEEEEEeCCHHHHHHHHHHhcCCeEEEEeecchhhhhhccCCcCCceEEEEEecCCCCCccEEEEeccCCCC-
Confidence            355779999999999999999999999999998655433           223345666654    2367776543221 


Q ss_pred             CCCCCCCCCCceEEEEEECCHHHHHHHHHHCCCeEEeeCCCceEEEEEcCCCCeEEEEeec
Q 029285          135 LSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQVD  195 (196)
Q Consensus       135 ~~~~p~~~~~~~hi~f~v~dl~~~~~~l~~~G~~~~~~~~g~~~~~~~DPdG~~iEl~e~~  195 (196)
                         ....+.++.|++|.|+|+   +++++++|+++...+.  ..+|++|||||.|||++..
T Consensus       101 ---~~~~~~g~~hiaf~V~d~---~~~l~~~G~~~~~~~~--~~~~~~DPdG~~iel~~~~  153 (330)
T 3zi1_A          101 ---DYKLGNDFMGITLASSQA---VSNARKLEWPLTEVAE--GVFETEAPGGYKFYLQNRS  153 (330)
T ss_dssp             ---CCCBCSSEEEEEEECHHH---HHHHHHHTCCCEEEET--TEEEEECTTSCEEEEESSC
T ss_pred             ---ccccCCCeeEEEEECchH---HHHHHHcCCceeccCC--ceEEEECCCCCEEEEEecC
Confidence               122355789999999987   6788899999876653  3799999999999999854

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A*

Probab=99.67  E-value=4.8e-16  Score=128.13  Aligned_cols=115  Identities=17%  Similarity=0.278  Sum_probs=86.8

Q ss_pred             CceeceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCC-CCceeEEEEeCCe--EEEEEecCCCCCCCCCCCCCCCce
Q 029285           70 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDK-LPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDR  146 (196)
Q Consensus        70 ~~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~-~~~~~~~l~~g~~--~l~l~~~~~~~~~~~~p~~~~~~~  146 (196)
                      .+.+.+++||+|.|+|++++++||+++|||++........ ......|+..++.  .+.+...+          ..++.+
T Consensus       146 ~~~~~~i~Hv~l~v~D~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~  215 (309)
T 3hpy_A          146 GIAPIQLDHCLLYGPNIAEVQKIFTEVLGFYLVERVLSPDGDSDMGIWLSCSHKVHDIAFVEYP----------EKGKLH  215 (309)
T ss_dssp             SSCCSEEEEEEEEESCHHHHHHHHHHTSCCEEEEEEECSSSCSEEEEEEESSSSSCSEEEEECS----------STTEEE
T ss_pred             CcccceeeeEEEEeCCHHHHHHHHHHhcCCEEEEEEecCCCCceEEEEEecCCCceeEEEecCC----------CCCcee
Confidence            4568899999999999999999999999999876543322 2245678877653  34443321          124689


Q ss_pred             EEEEEECCHHH---HHHHHHHCCCeEEeeC-----CCceEEEEEcCCCCeEEEEee
Q 029285          147 HTCIAIRDVSK---LKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQV  194 (196)
Q Consensus       147 hi~f~v~dl~~---~~~~l~~~G~~~~~~~-----~g~~~~~~~DPdG~~iEl~e~  194 (196)
                      |++|.|+|+++   ++++|+++|+++...+     .+.+.+|++|||||.|||...
T Consensus       216 Hiaf~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~  271 (309)
T 3hpy_A          216 HCSFLLESWEQVLRAGDIMSMNEVNVDIGPTRHGVTRGCTIYAWDPSGNRFETFMG  271 (309)
T ss_dssp             EEEEECSSHHHHHHHHHHHHHTTCCBSSCSEECSSSSEEEEEEECTTSCEEEEEEE
T ss_pred             EEEEECCCHHHHHHHHHHHHHCCCEEEeCCccCCCCccEEEEEECCCCCEEEEEeC
Confidence            99999997765   5789999999875432     246789999999999999864

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A*

Probab=99.67  E-value=9.2e-16  Score=126.42  Aligned_cols=109  Identities=19%  Similarity=0.224  Sum_probs=85.1

Q ss_pred             ceeceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEe-CC---eEEEEEecCCCCCCCCCCCCCCCce
Q 029285           71 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GA---EMIHLMELPNPDPLSGRPEHGGRDR  146 (196)
Q Consensus        71 ~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~-g~---~~l~l~~~~~~~~~~~~p~~~~~~~  146 (196)
                      |.+.+++||.|.|+|++++++||+++|||++..+.+.     ..+|+.. ++   ..+.+....           ..+..
T Consensus         4 ~~i~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~-----~~~~l~~~~~~~~~~l~l~~~~-----------~~~~~   67 (309)
T 3hpy_A            4 TGVLRPGHAQVRVLNLEEGIHFYRNVLGLVETGRDDQ-----GRVYFKCWDERDHSCYIIREAD-----------TAGID   67 (309)
T ss_dssp             CSEEEEEEEEEEESSHHHHHHHHHHTSCCEEEEECTT-----SCEEEECTTCCBSCSEEEEECS-----------SCEEE
T ss_pred             cccceeeEEEEEcCCHHHHHHHHHhccCCEEEEEcCC-----CeEEEEeccCCCceEEEEEeCC-----------CCcee
Confidence            4578999999999999999999999999999876421     2356665 43   234444321           13678


Q ss_pred             EEEEEECC---HHHHHHHHHHCCCeEEeeC-----CCceEEEEEcCCCCeEEEEeec
Q 029285          147 HTCIAIRD---VSKLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQVD  195 (196)
Q Consensus       147 hi~f~v~d---l~~~~~~l~~~G~~~~~~~-----~g~~~~~~~DPdG~~iEl~e~~  195 (196)
                      |++|.|++   +++++++|+++|+++...+     .+++.+||+|||||.|||++..
T Consensus        68 h~a~~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~f~DPdG~~iel~~~~  124 (309)
T 3hpy_A           68 FFGFKVLDKATLEKLDADLQAYGLTTTRIPAGEMLETGERVRFELPSGHLIELYAEK  124 (309)
T ss_dssp             EEEEEESCHHHHHHHHHHHHHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESCB
T ss_pred             EEEEEECCHHHHHHHHHHHHhCCCceeeccCCccCCCeeEEEEECCCCCEEEEEEcc
Confidence            99999996   8899999999999886543     3468999999999999998753

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A

Probab=99.67  E-value=1.3e-15  Score=126.52  Aligned_cols=112  Identities=17%  Similarity=0.220  Sum_probs=86.9

Q ss_pred             CceeceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCC--eEEEEEecCCCCCCCCCCCCCCCceE
Q 029285           70 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA--EMIHLMELPNPDPLSGRPEHGGRDRH  147 (196)
Q Consensus        70 ~~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~--~~l~l~~~~~~~~~~~~p~~~~~~~h  147 (196)
                      ++.+.+++|+.|.|+|++++++|| ++|||++......+......+|+..++  ..+.+...+           +.+.+|
T Consensus       147 ~~~~~~l~Hv~l~v~D~~~a~~FY-~~LGf~~~~~~~~~~g~~~~~f~~~~~~~~~~~~~~~~-----------~~~~~H  214 (323)
T 1f1u_A          147 AGELVRLDHFNQVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQTVHDTALTGGN-----------GPRMHH  214 (323)
T ss_dssp             TTCCCEEEEEEEEESCHHHHHHHH-HHTTCEEEEEEECTTCCEEEEEEESSSSSCSEEEEESS-----------BSEEEE
T ss_pred             CCCCceeeeEEEecCCHHHHHHHH-HhCCCeEEEEEEcCCCcEEEEEEEcCCCcccEEEeCCC-----------CCCceE
Confidence            466889999999999999999999 999999887554333333567777653  244444221           127789


Q ss_pred             EEEEECCHHH---HHHHHHHCCC--eEEeeC-----CCceEEEEEcCCCCeEEEEe
Q 029285          148 TCIAIRDVSK---LKMILDKAGI--SYTLSK-----SGRPAIFTRDPDANALEFTQ  193 (196)
Q Consensus       148 i~f~v~dl~~---~~~~l~~~G~--~~~~~~-----~g~~~~~~~DPdG~~iEl~e  193 (196)
                      ++|.|+|+++   ++++|+++|+  ++...+     .+...+|++|||||.|||.+
T Consensus       215 iaf~v~d~d~v~~~~~~l~~~G~~~~i~~~p~~~~~~~~~~~y~~DPdG~~iE~~~  270 (323)
T 1f1u_A          215 VAFATHEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDGHRIEIYT  270 (323)
T ss_dssp             EEEECSSHHHHHHHHHHHHHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEE
T ss_pred             EEEECCCHHHHHHHHHHHHHCCCccccccCCCccCCCCcEEEEEECCCCCEEEEEe
Confidence            9999999998   9999999999  886432     34678999999999999986

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp}

Probab=99.67  E-value=6.2e-16  Score=129.75  Aligned_cols=116  Identities=16%  Similarity=0.164  Sum_probs=87.7

Q ss_pred             ceeceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCC--eEEEEEecCCCCCCCCCCCCCCCceEE
Q 029285           71 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA--EMIHLMELPNPDPLSGRPEHGGRDRHT  148 (196)
Q Consensus        71 ~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~--~~l~l~~~~~~~~~~~~p~~~~~~~hi  148 (196)
                      ..+.+++||+|.|+|++++.+||+++|||++..+.+  .    .+++..++  ..+++...+...  ...+. .++++|+
T Consensus       149 ~~i~gl~Hv~L~v~Dle~t~~FY~~vLG~~~~~~~~--~----~~~~~~g~~~~~l~l~~~~~~~--~~~~g-~g~~~Hi  219 (335)
T 3oaj_A          149 VAIKGFGGATLLSEQPDKTADLLENIMGLERVGKEG--D----FVRYRSAGDIGNVIDLKLTPIG--RGQMG-AGTVHHI  219 (335)
T ss_dssp             TSCCEEEEEEEECSSHHHHHHHHHHTSCCEEEEEET--T----EEEEECSSSSSCEEEEESSCCC--BCBCS-BTEEEEE
T ss_pred             hhhccccceEEEECCHHHHHHHHHHHhCCEEeeccC--C----EEEEEeCCCCcEEEEEeCCCCC--cCCCC-CcceEEE
Confidence            467899999999999999999999999999987642  1    23444443  467777643321  11122 2468899


Q ss_pred             EEEECC---HHHHHHHHHHCCCeEEee--CCCceEEEEEcCCCCeEEEEeec
Q 029285          149 CIAIRD---VSKLKMILDKAGISYTLS--KSGRPAIFTRDPDANALEFTQVD  195 (196)
Q Consensus       149 ~f~v~d---l~~~~~~l~~~G~~~~~~--~~g~~~~~~~DPdG~~iEl~e~~  195 (196)
                      ||.|+|   ++++.++|+++|+.+...  +...+++||+||+||.|||.+..
T Consensus       220 Af~v~d~~~l~~~~~~L~~~G~~~~~~~~r~~~~siYfrDP~G~~iEl~td~  271 (335)
T 3oaj_A          220 AWRANDDEDQLDWQRYIASHGYGVTPVRDRNYFNAIYFREHGEILFEIATDP  271 (335)
T ss_dssp             EEEESSHHHHHHHHHHHHHTTCCCCCCEECSSSEEEEEECTTSCEEEEEESC
T ss_pred             EEEcCCHHHHHHHHHHHHHCCCCccccccCCcEEEEEEECCCCcEEEEEeCC
Confidence            999998   566899999999987543  33468899999999999999863

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A*

Probab=99.66  E-value=8.9e-16  Score=125.62  Aligned_cols=108  Identities=16%  Similarity=0.139  Sum_probs=84.9

Q ss_pred             eceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEEEE
Q 029285           73 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  152 (196)
Q Consensus        73 i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~p~~~~~~~hi~f~v  152 (196)
                      +++++||.|.|.|++++++||+++|||++..+.+      ..+++..++..+.|...+..         ..+..|++|.|
T Consensus         2 i~~i~hv~l~v~Dl~~s~~FY~~~LG~~~~~~~~------~~~~~~~~~~~~~l~~~~~~---------~~~~~~~~f~v   66 (297)
T 1lgt_A            2 IRSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTD------NGDLFRIDSRAWRIAVQQGE---------VDDLAFAGYEV   66 (297)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET------TEEEEESSSBSCSEEEEECT---------TCEEEEEEEEE
T ss_pred             ceEEEEEEEEcCCHHHHHHHHHHccCCEEeecCC------CeEEEEeCCCcEEEEEecCC---------CCCccEEEEEe
Confidence            6789999999999999999999999999987542      13667766543333222111         13668999999


Q ss_pred             C---CHHHHHHHHHHCCCeEEeeC-------CCceEEEEEcCCCCeEEEEeec
Q 029285          153 R---DVSKLKMILDKAGISYTLSK-------SGRPAIFTRDPDANALEFTQVD  195 (196)
Q Consensus       153 ~---dl~~~~~~l~~~G~~~~~~~-------~g~~~~~~~DPdG~~iEl~e~~  195 (196)
                      +   |+++++++|+++|+++...+       .+++.++|+|||||.|||++..
T Consensus        67 ~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  119 (297)
T 1lgt_A           67 ADAAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITFADPFGLPLEIYYGA  119 (297)
T ss_dssp             SSHHHHHHHHHHHHHTTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEECC
T ss_pred             CCHHHHHHHHHHHHHCCCeEEeCCccccccCCceeEEEEECCCCCEEEEEECc
Confidence            9   99999999999999886532       4578999999999999999854

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3

Probab=99.66  E-value=1.7e-15  Score=124.49  Aligned_cols=115  Identities=16%  Similarity=0.262  Sum_probs=84.5

Q ss_pred             CceeceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCC--eEEEEEecCCCCCCCCCCCCCCCceE
Q 029285           70 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA--EMIHLMELPNPDPLSGRPEHGGRDRH  147 (196)
Q Consensus        70 ~~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~--~~l~l~~~~~~~~~~~~p~~~~~~~h  147 (196)
                      .+.+.+++||.|.|+|++++++||+++|||++..............|+..++  ..+.+...+          ..+...|
T Consensus       145 ~~~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~----------~~g~~~h  214 (307)
T 1mpy_A          145 GMAAVRFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTKAHDVAFIHHP----------EKGRLHH  214 (307)
T ss_dssp             TTCCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEECTTCCEEEEEEESSSBSCSEEEEECS----------SSSEEEE
T ss_pred             CCCcCceeeEEEEcCCHHHHHHHHHHHcCCeeEeeeecCCCcEEEEEEEcCCCceeEEEecCC----------CCCcceE
Confidence            4678899999999999999999999999999886543211111235666643  245544321          1123689


Q ss_pred             EEEEEC---CHHHHHHHHHHCCCeEEeeC----C-CceEEEEEcCCCCeEEEEee
Q 029285          148 TCIAIR---DVSKLKMILDKAGISYTLSK----S-GRPAIFTRDPDANALEFTQV  194 (196)
Q Consensus       148 i~f~v~---dl~~~~~~l~~~G~~~~~~~----~-g~~~~~~~DPdG~~iEl~e~  194 (196)
                      ++|.|+   ++++++++|+++|+++..++    . .++.+||+|||||.|||.+.
T Consensus       215 i~f~v~d~~dv~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  269 (307)
T 1mpy_A          215 VSFHLETWEDLLRAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSGNRNEVFCG  269 (307)
T ss_dssp             EEEECSCHHHHHHHHHHHHHHTCCEEEEEEECSSTTCEEEEEECTTSCEEEEEEC
T ss_pred             EEEEcCCHHHHHHHHHHHHHCCCceeeCCccCCCCCceEEEEECCCCcEEEEEec
Confidence            999999   56677899999999885432    2 26789999999999999985

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10

Probab=99.66  E-value=1.6e-15  Score=126.70  Aligned_cols=121  Identities=15%  Similarity=0.205  Sum_probs=87.5

Q ss_pred             eeceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCC-CCceeEEEEeC----CeEEEEEecCCCCCCCCCCCCCCCce
Q 029285           72 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDK-LPYRGAWLWVG----AEMIHLMELPNPDPLSGRPEHGGRDR  146 (196)
Q Consensus        72 ~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~-~~~~~~~l~~g----~~~l~l~~~~~~~~~~~~p~~~~~~~  146 (196)
                      .+.+++||.|.|+|+++|++||+++|||++..+..... ......++..+    +..+.++..+....  . .....+..
T Consensus        27 ~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~l~~~~~~~~--~-~~~~~~~~  103 (338)
T 1zsw_A           27 EIKGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFEIPLVGR--T-YRGTNAIT  103 (338)
T ss_dssp             CCCSEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEETTEEEEEEEEEESTTCCTTSEEEEEECTTCCB--C-BCCBSEEE
T ss_pred             cCccccEEEEEcCCHHHHHHHHHHhcCCEEEEeecccCCCceEEEEEcCCCCCCCCEEEEEECCCCcc--C-cCCCCCee
Confidence            47899999999999999999999999999886542111 11112223332    34677776543211  1 11124578


Q ss_pred             EEEEEEC---CHHHHHHHHHHCCCeEEeeC--CCceEEEEEcCCCCeEEEEeec
Q 029285          147 HTCIAIR---DVSKLKMILDKAGISYTLSK--SGRPAIFTRDPDANALEFTQVD  195 (196)
Q Consensus       147 hi~f~v~---dl~~~~~~l~~~G~~~~~~~--~g~~~~~~~DPdG~~iEl~e~~  195 (196)
                      |++|.|+   |+++++++|+++|+++...+  .|.+.+||+|||||.|||++..
T Consensus       104 hiaf~v~~~~dld~~~~~l~~~G~~~~~~~~~~G~~~~~f~DPdG~~iel~~~~  157 (338)
T 1zsw_A          104 RIGLLVPSEDSLHYWKERFEKFDVKHSEMTTYANRPALQFEDAEGLRLVLLVSN  157 (338)
T ss_dssp             EEEEEESCHHHHHHHHHHHHHTTCEECCSEEETTEEEEEEECTTCCEEEEEECT
T ss_pred             eEEEEcCCHHHHHHHHHHHHHCCCccccccccCCcEEEEEECCCCCEEEEEEcC
Confidence            9999998   78999999999999886442  4668999999999999999864

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A*

Probab=99.65  E-value=2.4e-15  Score=123.19  Aligned_cols=113  Identities=12%  Similarity=0.222  Sum_probs=84.3

Q ss_pred             eeceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCC---------CCCceeEEEEeCC--eEEEEEecCCCCCCCCCCC
Q 029285           72 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHD---------KLPYRGAWLWVGA--EMIHLMELPNPDPLSGRPE  140 (196)
Q Consensus        72 ~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~---------~~~~~~~~l~~g~--~~l~l~~~~~~~~~~~~p~  140 (196)
                      .+.+++|+.|.|+|++++++||+++|||++.......         ......+|+..++  ..+.+...+          
T Consensus       139 ~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~----------  208 (300)
T 2zyq_A          139 GEQGMGHVVLSTRDDAEALHFYRDVLGFRLRDSMRLPPQMVGRPADGPPAWLRFFGCNPRHHSLAFLPMP----------  208 (300)
T ss_dssp             GGGCSCEEEEECSCHHHHHHHHHTTTCCEEEEEEEECGGGGTCCTTSCCEEEEEEESSSBSCSEEEESSC----------
T ss_pred             CCCccCeEEEEeCCHHHHHHHHHHhcCCEEeeeecccccccccCCCCCceEEEEEEECCCccEEEEecCC----------
Confidence            4678999999999999999999999999987532211         1123456777654  245555321          


Q ss_pred             CCCCceEEEEEECCHHH---HHHHHHHCCCeEEeeC----C-CceEEEEEcCCCCeEEEEee
Q 029285          141 HGGRDRHTCIAIRDVSK---LKMILDKAGISYTLSK----S-GRPAIFTRDPDANALEFTQV  194 (196)
Q Consensus       141 ~~~~~~hi~f~v~dl~~---~~~~l~~~G~~~~~~~----~-g~~~~~~~DPdG~~iEl~e~  194 (196)
                      ...+.+|++|.|+|+++   ++++|+++|+++...+    . +.+.+||+|||||.|||.+.
T Consensus       209 ~~~g~~h~af~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iEl~~~  270 (300)
T 2zyq_A          209 TSSGIVHLMVEVEQADDVGLCLDRALRRKVPMSATLGRHVNDLMLSFYMKTPGGFDIEFGCE  270 (300)
T ss_dssp             CSSSEEEEEEEBSSHHHHHHHHHHHHHTTCCEEEEEEEESSSCCEEEEEECTTSSEEEEEEC
T ss_pred             CCCCceEEEEEeCCHHHHHHHHHHHHHCCCceeecccccCCCCeEEEEEECCCCCEEEEEeC
Confidence            12467899999998665   5999999999886542    2 36789999999999999863

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B*

Probab=99.65  E-value=1e-15  Score=125.00  Aligned_cols=108  Identities=13%  Similarity=0.135  Sum_probs=83.9

Q ss_pred             eceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEEEE
Q 029285           73 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  152 (196)
Q Consensus        73 i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~p~~~~~~~hi~f~v  152 (196)
                      +++++||.|.|.|++++++||+++|||++..+.+      ..+|+..++..+.+......         ..+..|++|.|
T Consensus         2 i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~------~~~~l~~~~~~~~l~~~~~~---------~~~~~~~~f~v   66 (292)
T 1kw3_B            2 IERLGYLGFAVKDVPAWDHFLTKSVGLMAAGSAG------DAALYRADQRAWRIAVQPGE---------LDDLAYAGLEV   66 (292)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET------TEEEEESSSBSCSEEEEECT---------TCEEEEEEEEC
T ss_pred             ceeEEEEEEEeCCHHHHHHHHHhcCCCEEeecCC------CeEEEEcCCceEEEEEccCC---------CCCccEEEEEE
Confidence            5789999999999999999999999999987532      13567666543222221111         13568999999


Q ss_pred             C---CHHHHHHHHHHCCCeEEeeC-------CCceEEEEEcCCCCeEEEEeec
Q 029285          153 R---DVSKLKMILDKAGISYTLSK-------SGRPAIFTRDPDANALEFTQVD  195 (196)
Q Consensus       153 ~---dl~~~~~~l~~~G~~~~~~~-------~g~~~~~~~DPdG~~iEl~e~~  195 (196)
                      +   |+++++++|+++|+++...+       .+++.++|+|||||.|||.+..
T Consensus        67 ~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  119 (292)
T 1kw3_B           67 DDAAALERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQDPFGLPLEIYYGP  119 (292)
T ss_dssp             SSHHHHHHHHHHHHHHTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEECC
T ss_pred             CCHHHHHHHHHHHHHcCCeEeecCcccccccCceEEEEEECCCCCEEEEEECc
Confidence            8   99999999999999886543       4578899999999999999853

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A

Probab=99.64  E-value=1.4e-15  Score=125.13  Aligned_cols=109  Identities=17%  Similarity=0.156  Sum_probs=84.6

Q ss_pred             CceeceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCC--eEEEEEecCCCCCCCCCCCCCCCceE
Q 029285           70 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA--EMIHLMELPNPDPLSGRPEHGGRDRH  147 (196)
Q Consensus        70 ~~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~--~~l~l~~~~~~~~~~~~p~~~~~~~h  147 (196)
                      .|.+.+++||.|.|+|++++++||+++|||++..+.+  .   ...|+..++  ..+.+....           ..+..|
T Consensus         4 ~m~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~--~---~~~~~~~~~~~~~l~l~~~~-----------~~~~~~   67 (302)
T 2ehz_A            4 QAAVIELGYMGISVKDPDAWKSFATDMLGLQVLDEGE--K---DRFYLRMDYWHHRIVVHHNG-----------QDDLEY   67 (302)
T ss_dssp             CCCEEEEEEEEEECSCHHHHHHHHHHTTCCEEECCSC--S---SEEEEESSSBSCSEEEESSC-----------CSEEEE
T ss_pred             cccccEeeEEEEEeCCHHHHHHHHHhcCCCEEEeccC--C---cceEEEeCCCceEEEEecCC-----------CCCeeE
Confidence            3668899999999999999999999999999986432  1   246676643  234443211           135689


Q ss_pred             EEEEEC---CHHHHHHHHHHCCCeEEeeC-------CCceEEEEEcCCCCeEEEEee
Q 029285          148 TCIAIR---DVSKLKMILDKAGISYTLSK-------SGRPAIFTRDPDANALEFTQV  194 (196)
Q Consensus       148 i~f~v~---dl~~~~~~l~~~G~~~~~~~-------~g~~~~~~~DPdG~~iEl~e~  194 (196)
                      ++|.|+   |+++++++|+++|+++...+       .+++.++|+|||||.|||.+.
T Consensus        68 ~~~~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  124 (302)
T 2ehz_A           68 LGWRVAGKPEFEALGQKLIDAGYKIRICDKVEAQERMVLGLMKTEDPGGNPTEIFWG  124 (302)
T ss_dssp             EEEEESSHHHHHHHHHHHHHTTCCCEECCHHHHHHHTEEEEEEEECTTSCEEEEEEE
T ss_pred             EEEEECCHHHHHHHHHHHHHCCCcEEECCccccccccceEEEEEECCCCCEEEEEEC
Confidence            999995   78999999999999886543       246889999999999999985

>4ghg_A Homoprotocatechuate 2,3-dioxygenase; oxygen activation, Fe(II), 2-His-1-carboxylate triad, 4-nitrocatechol, OXY complex, oxidoreductase; HET: P6G PG4 DHY; 1.50A {Brevibacterium fuscum} PDB: 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* 3ojn_A* 4ghh_A* 4ghc_A 4ghd_A* 4ghe_A* 4ghf_A* 3eck_A* 3ecj_A*

Probab=99.64  E-value=6.5e-15  Score=124.93  Aligned_cols=111  Identities=20%  Similarity=0.223  Sum_probs=86.6

Q ss_pred             CCCCceeceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCe----EEEEEecCCCCCCCCCCCCC
Q 029285           67 DKIDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE----MIHLMELPNPDPLSGRPEHG  142 (196)
Q Consensus        67 ~~~~~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~----~l~l~~~~~~~~~~~~p~~~  142 (196)
                      ..++..|++++||.|.|.|++++++||+++|||+++.+.+      ..+|+..++.    .+.+...+           .
T Consensus         9 ~~P~p~I~rl~hV~l~V~DLe~s~~FY~dvLGL~~~~~~~------~~~~lr~~~~~~~~~l~l~~~~-----------~   71 (365)
T 4ghg_A            9 VAPAPDILRCAYAELVVTDLAKSRNFYVDVLGLHVSYEDE------NQIYLRSFEEFIHHNLVLTKGP-----------V   71 (365)
T ss_dssp             SSCCCCEEEEEEEEEEESCHHHHHHHHTTTTCCEEEEECS------SEEEEECTTCCSSCSEEEEECS-----------S
T ss_pred             CCCCCCCCEEEEEEEEeCCHHHHHHHHhhCCCCEEEEEcC------CEEEEEeCCCCcceEEEeccCC-----------C
Confidence            3356679999999999999999999999999999987643      2467776542    23333221           1


Q ss_pred             CCceEEEEEEC---CHHHHHHHHHHCCCeEEeeC-----CCceEEEEEcCCCCeEEEEee
Q 029285          143 GRDRHTCIAIR---DVSKLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQV  194 (196)
Q Consensus       143 ~~~~hi~f~v~---dl~~~~~~l~~~G~~~~~~~-----~g~~~~~~~DPdG~~iEl~e~  194 (196)
                      .++.|++|.|.   +++++.++|+++|+.+...+     .+++.++|+|||||.|||+..
T Consensus        72 ~gl~~~a~~v~s~~dLd~~~~~L~~~Gv~v~~~~~~~~~~~g~~~~f~DPdG~~iEl~~~  131 (365)
T 4ghg_A           72 AALKAMAFRVRTPEDVDKAEAYYQELGCRTERRKDGFVKGIGDALRVEDPLGFPYEFFFE  131 (365)
T ss_dssp             CEEEEEEEEESSHHHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECC
T ss_pred             CCcceEEEEeCCHHHHHHHHHHHHHcCCcceeccccccCCCceEEEEECCCCCEEEEEEE
Confidence            36789999998   57888999999999987643     236889999999999999853

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A*

Probab=99.64  E-value=1.4e-15  Score=124.58  Aligned_cols=107  Identities=17%  Similarity=0.167  Sum_probs=83.2

Q ss_pred             ceeceeeEEEEEcCCHHHHHHHHHhccCCEEee-ecCCCCCCceeEEEEeCCe--EEEEEecCCCCCCCCCCCCCCCceE
Q 029285           71 YGVVSVHHVGILCENLERSLEFYQNILGLEINE-ARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRH  147 (196)
Q Consensus        71 ~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~-~~~~~~~~~~~~~l~~g~~--~l~l~~~~~~~~~~~~p~~~~~~~h  147 (196)
                      |++++++|+.|.|+|++++++||+++|||++.. +.+      ..+|+..++.  .+.+....           ..+..|
T Consensus         1 M~i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~------~~~~~~~~~~~~~l~l~~~~-----------~~~~~~   63 (300)
T 2zyq_A            1 MSIRSLGYLRIEATDMAAWREYGLKVLGMVEGKGAPE------GALYLRMDDFPARLVVVPGE-----------HDRLLE   63 (300)
T ss_dssp             -CCCEEEEEEEEESCHHHHHHHHHHTSCCEECSSCCS------SCEEEESSSSSCSEEEEECS-----------SCEEEE
T ss_pred             CCcceEEEEEEEeCCHHHHHHHHHHccCCEEeccCCC------CeEEEEeCCCcEEEEEecCC-----------CCCcce
Confidence            457899999999999999999999999999876 321      1356766553  34443311           136689


Q ss_pred             EEEEECC---HHHHHHHHHHCCCeEEeeC-------CCceEEEEEcCCCCeEEEEee
Q 029285          148 TCIAIRD---VSKLKMILDKAGISYTLSK-------SGRPAIFTRDPDANALEFTQV  194 (196)
Q Consensus       148 i~f~v~d---l~~~~~~l~~~G~~~~~~~-------~g~~~~~~~DPdG~~iEl~e~  194 (196)
                      ++|.|++   +++++++|+++|+++...+       .+++.++|+|||||.|||++.
T Consensus        64 ~~~~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  120 (300)
T 2zyq_A           64 AGWECANAEGLQEIRNRLDLEGTPYKEATAAELADRRVDEMIRFADPSGNCLEVFHG  120 (300)
T ss_dssp             EEEECSSHHHHHHHHHHHHHHTCCCEECCHHHHHHHTCSEEEEEECTTCCEEEEEEC
T ss_pred             EEEEeCCHHHHHHHHHHHHHcCCeEEeCChhhcccccceEEEEEECCCCCEEEEEEc
Confidence            9999974   8889999999999886532       457889999999999999986

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10

Probab=99.64  E-value=3.1e-15  Score=125.01  Aligned_cols=116  Identities=14%  Similarity=0.210  Sum_probs=85.0

Q ss_pred             CceeceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEe--CCe--EEEEEecCCCCCCCCCCCCCCCc
Q 029285           70 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV--GAE--MIHLMELPNPDPLSGRPEHGGRD  145 (196)
Q Consensus        70 ~~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~--g~~--~l~l~~~~~~~~~~~~p~~~~~~  145 (196)
                      .+.+.+++||.|.|+|++++++||+++|||++....+  .    .+++..  ++.  .+..+....+   ...+. .++.
T Consensus       175 ~~~~~~l~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~--~----~~~~~~~~~g~~~~~~~~~~~~~---~~~~~-~~~~  244 (338)
T 1zsw_A          175 KHQIQGMGSVELTVRRLDKMASTLTEIFGYTEVSRND--Q----EAIFQSIKGEAFGEIVVKYLDGP---TEKPG-RGSI  244 (338)
T ss_dssp             GGSCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEECS--S----EEEEESSTTCSTTCEEEEECCSS---BCBCC-BTCE
T ss_pred             cccCceEEEEEEEECCHHHHHHHHHHhcCCEEEeecC--C----eEEEEecCCCCceEEEEeccCCC---CCCCC-CCce
Confidence            4568899999999999999999999999999987543  1    244445  232  3443332111   01111 2456


Q ss_pred             eEEEEEEC---CHHHHHHHHHHCCCeEEee--CCCceEEEEEcCCCCeEEEEeec
Q 029285          146 RHTCIAIR---DVSKLKMILDKAGISYTLS--KSGRPAIFTRDPDANALEFTQVD  195 (196)
Q Consensus       146 ~hi~f~v~---dl~~~~~~l~~~G~~~~~~--~~g~~~~~~~DPdG~~iEl~e~~  195 (196)
                      .|++|.|+   |+++++++|+++|+++...  ..+.+.+||+|||||.|||.+..
T Consensus       245 ~hiaf~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~  299 (338)
T 1zsw_A          245 HHLAIRVKNDAELAYWEEQVKQRGFHSSGIIDRFYFKSLYFRESNGILFEIATDG  299 (338)
T ss_dssp             EEEEEEESSHHHHHHHHHHHHHTTCCCCCCEECSSEEEEEEECTTCCEEEEEEEE
T ss_pred             EEEEEEeCCHHHHHHHHHHHHHCCCceeeeeecCceEEEEEECCCCCEEEEEEcC
Confidence            89999999   7899999999999988522  24568899999999999999853

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans}

Probab=99.63  E-value=4.9e-15  Score=122.51  Aligned_cols=108  Identities=16%  Similarity=0.240  Sum_probs=85.4

Q ss_pred             CceeceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCe--EEEEEecCCCCCCCCCCCCCCCceE
Q 029285           70 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRH  147 (196)
Q Consensus        70 ~~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~--~l~l~~~~~~~~~~~~p~~~~~~~h  147 (196)
                      +..+.+++||.|.|+|++++++||+++|||++......     ..+|+..++.  .+.+...         +   .+.+|
T Consensus       136 ~~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~-----~~~fl~~~~~~~~l~l~~~---------~---~g~~h  198 (310)
T 3b59_A          136 EGVPVKISHIVLHSPNHQDMVKFFTDVLGFKVSDWLGD-----FMCFLRCNSAHHRIAILPG---------P---PCLNH  198 (310)
T ss_dssp             CCCCCEEEEEEEEETTHHHHHHHHHHTSCCEEEEEETT-----TEEEEESSSBSCSEEEEES---------S---SEEEE
T ss_pred             CCcCcEeceEEEecCCHHHHHHHHHhCCCCEEEEeeCC-----eEEEEecCCCcceEEEECC---------C---CceEE
Confidence            35678999999999999999999999999999865421     3577877543  4555432         1   26789


Q ss_pred             EEEEECCHHHH---HHHHHHCCCeEEeeC-----CCceEEEEEcCCCCeEEEEee
Q 029285          148 TCIAIRDVSKL---KMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQV  194 (196)
Q Consensus       148 i~f~v~dl~~~---~~~l~~~G~~~~~~~-----~g~~~~~~~DPdG~~iEl~e~  194 (196)
                      ++|.|+|++++   +++|+++|+++...+     .+.+.+|++|||||.|||.+.
T Consensus       199 i~f~v~d~d~~~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~  253 (310)
T 3b59_A          199 VAYDMLSVDDMMRGAHRLKVKGIDIGWGPGRHTAGNNTFSYFVTPGGFVTEYTSE  253 (310)
T ss_dssp             EEEECSSHHHHHHHHHHHHHTTCCCSEEEEECSTTCCEEEEEECTTSCEEEEEEC
T ss_pred             EEEEcCCHHHHHHHHHHHHHcCCceeecCccccCCCcEEEEEECCCCCEEEEEeC
Confidence            99999998777   999999999876542     235789999999999999873

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A

Probab=99.63  E-value=3e-15  Score=123.11  Aligned_cols=108  Identities=17%  Similarity=0.214  Sum_probs=85.5

Q ss_pred             ceeceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCC--eEEEEEecCCCCCCCCCCCCCCCceEE
Q 029285           71 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA--EMIHLMELPNPDPLSGRPEHGGRDRHT  148 (196)
Q Consensus        71 ~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~--~~l~l~~~~~~~~~~~~p~~~~~~~hi  148 (196)
                      |.+.+++||.|.|+|++++++||+++|||++.....  .   ..+|+..++  ..+.|....           ..+..|+
T Consensus         2 m~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~--~---~~~~~~~~~~~~~l~l~~~~-----------~~~~~~~   65 (305)
T 2wl9_A            2 AKVTELGYLGLSVSNLDAWRDYAAGIMGMQVVDDGE--D---DRIYLRMDRWHHRIVLHADG-----------SDDLAYI   65 (305)
T ss_dssp             CCCCEEEEEEEECSCHHHHHHHHTTTTCCEEECCSC--T---TEEEEECSSBSCSEEEECSS-----------CCEEEEE
T ss_pred             CccceeeEEEEEeCCHHHHHHHHHhccCCEEeeccC--C---CeEEEEeCCCeEEEEEEECC-----------CCCeEEE
Confidence            357899999999999999999999999999876222  1   245777765  456665321           1356899


Q ss_pred             EEEEC---CHHHHHHHHHHCCCeEEeeC-------CCceEEEEEcCCCCeEEEEee
Q 029285          149 CIAIR---DVSKLKMILDKAGISYTLSK-------SGRPAIFTRDPDANALEFTQV  194 (196)
Q Consensus       149 ~f~v~---dl~~~~~~l~~~G~~~~~~~-------~g~~~~~~~DPdG~~iEl~e~  194 (196)
                      +|.|+   |+++++++|+++|+++...+       .+++.++|+|||||.|||.+.
T Consensus        66 ~f~v~~~~dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~~~DPdG~~iel~~~  121 (305)
T 2wl9_A           66 GWRVAGPVELDELAEQLKNAGIPFEVASDADAAERRVLGLVKLHDPGGNPTEIFYG  121 (305)
T ss_dssp             EEECSSHHHHHHHHHHHHHTTCCCEECCHHHHHHTTEEEEEEEECTTCCEEEEEEE
T ss_pred             EEEECCHHHHHHHHHHHHHCCCceEeCCcccccccCcEEEEEEECCCCCEEEEEEC
Confidence            99997   69999999999999986542       236889999999999999986

>3zi1_A Glyoxalase domain-containing protein 4; isomerase; 1.90A {Homo sapiens}

Probab=99.63  E-value=8.5e-15  Score=122.42  Aligned_cols=111  Identities=17%  Similarity=0.289  Sum_probs=85.2

Q ss_pred             ceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCe--EEEEEecCCCCCCCCCCCCCCCceEEEEE
Q 029285           74 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHTCIA  151 (196)
Q Consensus        74 ~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~--~l~l~~~~~~~~~~~~p~~~~~~~hi~f~  151 (196)
                      ..+.||.|.|.|++++++||+++|||++....+...    .+|+..++.  .+++......      ...+.+..|++|.
T Consensus       158 ~~i~hv~L~v~Dl~~a~~FY~~vLG~~~~~~~~~~~----~~~l~~g~~~~~l~l~~~~~~------~~~~~~~~hiaf~  227 (330)
T 3zi1_A          158 DPVLKVTLAVSDLQKSLNYWCNLLGMKIYENDEEKQ----RALLGYADNQCKLELQGVKGG------VDHAAAFGRIAFS  227 (330)
T ss_dssp             CSEEEEEEEESCHHHHHHHHHHTTCCEEEEEETTTT----EEEEESSTTSCEEEEEECSSC------CCCBTTCCEEEEE
T ss_pred             CceeEEEEECCCHHHHHHHHHHhcCCEEEeeccCCc----EEEEEeCCceEEEEECCCCCC------CCCCCCCceEEEE
Confidence            357899999999999999999999999998655332    467877754  4554433221      1123456799999


Q ss_pred             EC--CHHHHHHHHHHCCCeEEeeC--------CCceEEEEEcCCCCeEEEEee
Q 029285          152 IR--DVSKLKMILDKAGISYTLSK--------SGRPAIFTRDPDANALEFTQV  194 (196)
Q Consensus       152 v~--dl~~~~~~l~~~G~~~~~~~--------~g~~~~~~~DPdG~~iEl~e~  194 (196)
                      |+  |+++++++|+++|+++..++        .+.+.+||+|||||.|||++.
T Consensus       228 v~~~dld~~~~rl~~~G~~i~~~~~~~~~pg~~g~~~~~f~DPdG~~iEl~~~  280 (330)
T 3zi1_A          228 CPQKELPDLEDLMKRENQKILTPLVSLDTPGKATVQVVILADPDGHEICFVGD  280 (330)
T ss_dssp             ECGGGHHHHHHHHHHTTCEEEEEEEEECCTTSCCEEEEEEECTTCCEEEEEEH
T ss_pred             EEcccHHHHHHHHHHcCCcEecCceecccCCCCceEEEEEECCCCCEEEEEEe
Confidence            96  89999999999999975432        256899999999999999985

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3

Probab=99.62  E-value=2.4e-15  Score=123.64  Aligned_cols=108  Identities=16%  Similarity=0.151  Sum_probs=84.1

Q ss_pred             eceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCC--eEEEEEecCCCCCCCCCCCCCCCceEEEE
Q 029285           73 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA--EMIHLMELPNPDPLSGRPEHGGRDRHTCI  150 (196)
Q Consensus        73 i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~--~~l~l~~~~~~~~~~~~p~~~~~~~hi~f  150 (196)
                      +++++||.|.|+|++++++||+++|||++..+.+.     ..+|+..++  ..+.|......         ..+..|++|
T Consensus         5 i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~-----~~~~l~~~~~~~~~~l~~~~~~---------~~~~~~~~f   70 (307)
T 1mpy_A            5 VMRPGHVQLRVLDMSKALEHYVELLGLIEMDRDDQ-----GRVYLKAWTEVDKFSLVLREAD---------EPGMDFMGF   70 (307)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHTTCCEEEEECTT-----SCEEEECTTCCBSCSEEEEECS---------SCEEEEEEE
T ss_pred             cceeeeEEEEeCCHHHHHHHHHHccCCEEEeecCC-----CcEEEEecCCCCceEEEEccCC---------CCCcceEEE
Confidence            67999999999999999999999999999875432     126676643  23333322111         126689999


Q ss_pred             EE---CCHHHHHHHHHHCCCeEEeeC-----CCceEEEEEcCCCCeEEEEee
Q 029285          151 AI---RDVSKLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQV  194 (196)
Q Consensus       151 ~v---~dl~~~~~~l~~~G~~~~~~~-----~g~~~~~~~DPdG~~iEl~e~  194 (196)
                      .|   +|+++++++|+++|+++...+     .+++.++|+|||||.|||++.
T Consensus        71 ~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  122 (307)
T 1mpy_A           71 KVVDEDALRQLERDLMAYGCAVEQLPAGELNSCGRRVRFQAPSGHHFELYAD  122 (307)
T ss_dssp             EESCHHHHHHHHHHHHHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESC
T ss_pred             EeCCHHHHHHHHHHHHHcCCceecCCcccCCCceEEEEEECCCCCEEEEEEc
Confidence            99   799999999999999886554     246889999999999999984

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A

Probab=99.62  E-value=9.6e-15  Score=121.37  Aligned_cols=109  Identities=19%  Similarity=0.222  Sum_probs=86.8

Q ss_pred             CCceeceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEe-CC---eEEEEEecCCCCCCCCCCCCCCC
Q 029285           69 IDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GA---EMIHLMELPNPDPLSGRPEHGGR  144 (196)
Q Consensus        69 ~~~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~-g~---~~l~l~~~~~~~~~~~~p~~~~~  144 (196)
                      ..+++.+++|+.|.|.|++++++||+++|||++..+.+      ..+++.. ++   ..+.+....           ..+
T Consensus        11 ~~~~i~~l~hv~l~v~Dl~~a~~FY~~vlG~~~~~~~~------~~~~l~~~~~~~~~~l~l~~~~-----------~~~   73 (323)
T 1f1u_A           11 PAPDIVRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDE------NTIYLRSLEEFIHHNLVLRQGP-----------IAA   73 (323)
T ss_dssp             CCCCEEEEEEEEEEESCHHHHHHHHTTTTCCEEEEECS------SEEEEECTTCCSSCSEEEEECS-----------SCE
T ss_pred             CCcccceeeEEEEEeCCHHHHHHHHHhCCCCEEeeecC------CEEEEEecCCCCcEEEEEEECC-----------CCC
Confidence            55778999999999999999999999999999987532      2466764 32   245554321           125


Q ss_pred             ceEEEEEE---CCHHHHHHHHHHCCCeEEeeCC-----CceEEEEEcCCCCeEEEEee
Q 029285          145 DRHTCIAI---RDVSKLKMILDKAGISYTLSKS-----GRPAIFTRDPDANALEFTQV  194 (196)
Q Consensus       145 ~~hi~f~v---~dl~~~~~~l~~~G~~~~~~~~-----g~~~~~~~DPdG~~iEl~e~  194 (196)
                      ..|++|.|   +|+++++++|+++|+++...+.     +++.++|+||+||.|||++.
T Consensus        74 ~~~~~f~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~DP~G~~iel~~~  131 (323)
T 1f1u_A           74 VAAFAYRVKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRVEDPLGFPYEFFYE  131 (323)
T ss_dssp             EEEEEEEESSHHHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECC
T ss_pred             eeEEEEEeCCHHHHHHHHHHHHhCCCcEEeccccccCCcceEEEEECCCCCEEEEEEe
Confidence            67999999   6999999999999999876543     46889999999999999875

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis}

Probab=99.62  E-value=1.6e-14  Score=118.12  Aligned_cols=115  Identities=15%  Similarity=0.123  Sum_probs=83.4

Q ss_pred             eceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEEEE
Q 029285           73 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  152 (196)
Q Consensus        73 i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~p~~~~~~~hi~f~v  152 (196)
                      ...+.|+.|.|+|++++++||+++|||++......+..  ..+++..++..+..+ ....      +.......|++|.|
T Consensus       162 ~~~~~~~~l~v~D~~~a~~FY~~vlG~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~~~~~v  232 (282)
T 3oxh_A          162 TGTLIWNELLTDKPDLALAFYEAVVGLTHSSMEIAAGQ--NYRVLKAGDAEVGGC-MEPP------MPGVPNHWHVYFAV  232 (282)
T ss_dssp             TTSEEEEEEECSCHHHHHHHHHHHHCCEEEEC---------CEEEEETTEEEEEE-ECCS------STTCCSEEEEEEEC
T ss_pred             CCccEEEEEEcCCHHHHHHHHHHHhCCeeeeccCCCCc--ceEEEEcCCccEeee-cCCC------CCCCCCeEEEEEEe
Confidence            35789999999999999999999999998864311111  234566666544323 1111      11122456899999


Q ss_pred             CCHHHHHHHHHHCCCeEEee----CCCceEEEEEcCCCCeEEEEeecC
Q 029285          153 RDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVDG  196 (196)
Q Consensus       153 ~dl~~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdG~~iEl~e~~~  196 (196)
                      +|+++++++++++|+++..+    +.+++.++++|||||.|+|++..+
T Consensus       233 ~dvd~~~~~~~~~G~~~~~~p~~~~~~~~~~~~~DPdGn~~~l~~~~~  280 (282)
T 3oxh_A          233 DDADATAAKAAAAGGQVIAEPADIPSVGRFAVLSDPQGAIFSVLKAAP  280 (282)
T ss_dssp             SCHHHHHHHHHHTTCEEEEEEEEETTTEEEEEEECTTSCEEEEEEEC-
T ss_pred             CCHHHHHHHHHHcCCEEecCCeEcCCCeEEEEEECCCCCEEEEEecCC
Confidence            99999999999999998654    345889999999999999999764

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii}

Probab=99.61  E-value=1.5e-14  Score=121.21  Aligned_cols=108  Identities=13%  Similarity=0.250  Sum_probs=84.8

Q ss_pred             CceeceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCC----eEEEEEecCCCCCCCCCCCCCCCc
Q 029285           70 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA----EMIHLMELPNPDPLSGRPEHGGRD  145 (196)
Q Consensus        70 ~~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~----~~l~l~~~~~~~~~~~~p~~~~~~  145 (196)
                      .+.+.+++||.|.|+|++++++||+++|||++..+.+      ...|+...+    ..+.+...+           ..+.
T Consensus         6 ~~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~------~~~~l~~~~~~~~~~l~l~~~~-----------~~g~   68 (339)
T 3lm4_A            6 RFDIAHLARAELFSPKPQETLDFFTKFLGMYVTHREG------QSVYLRGYEDPYPWSLKITEAP-----------EAGM   68 (339)
T ss_dssp             GGSEEEEEEEEEEESSHHHHHHHHHHTTCCEEEEEET------TEEEEECTTCSSSCSEEEEECS-----------SCEE
T ss_pred             CCCCcEEEEEEEEeCCHHHHHHHHHhcCCCEEEEecC------CEEEEEecCCCCceEEEEeeCC-----------CCCc
Confidence            4568999999999999999999999999999987632      235666521    233343321           1367


Q ss_pred             eEEEEEECC---HHHHHHHHHHCCCeEEeeC---CCceEEEEEcCCCCeEEEEee
Q 029285          146 RHTCIAIRD---VSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQV  194 (196)
Q Consensus       146 ~hi~f~v~d---l~~~~~~l~~~G~~~~~~~---~g~~~~~~~DPdG~~iEl~e~  194 (196)
                      .|++|.|++   +++++++|+++|+++...+   .+++.++|+|||||.|||+..
T Consensus        69 ~~~af~v~~~~dld~~~~~l~~~G~~~~~~~~~~~~~~~~~f~DPdG~~iel~~~  123 (339)
T 3lm4_A           69 GHAAMRTSSPEALERRAKSLTDGNVDGTWSEDQFGYGKTFEYQSPDGHNLQLLWE  123 (339)
T ss_dssp             EEEEEEESSHHHHHHHHHHHHHTTCCEEEECCSTTBCCEEEEECTTCCEEEEECC
T ss_pred             ceEEEEeCCHHHHHHHHHHHHHCCCceeeccCCCCceEEEEEECCCCCEEEEEEe
Confidence            899999997   8899999999999987654   347899999999999999863

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans}

Probab=99.60  E-value=9.2e-15  Score=120.88  Aligned_cols=108  Identities=20%  Similarity=0.290  Sum_probs=87.0

Q ss_pred             ceeceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCC----eEEEEEecCCCCCCCCCCCCCCCce
Q 029285           71 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA----EMIHLMELPNPDPLSGRPEHGGRDR  146 (196)
Q Consensus        71 ~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~----~~l~l~~~~~~~~~~~~p~~~~~~~  146 (196)
                      +.+.++.|+.|.|+|++++++||+++|||++..+.+      ..+++..++    ..+.|...+           ..+..
T Consensus         4 ~~i~~l~~v~l~v~Dl~~a~~FY~~vlG~~~~~~~~------~~~~l~~~~~~~~~~l~l~~~~-----------~~~~~   66 (310)
T 3b59_A            4 SRVTEIRYVGYGVKDFDAEKAFYADVWGLEPVGEDA------NNAWFKAQGADEHHVVQLRRAD-----------ENRID   66 (310)
T ss_dssp             CCEEEEEEEEEEESSHHHHHHHHHHTTCCEEEEECS------SEEEEECTTSCCSCSEEEEECS-----------SCEEE
T ss_pred             eecceeeEEEEecCCHHHHHHHHHhCcCCEEeeecC------CeEEEEECCCCCCEEEEEEECC-----------CCCee
Confidence            568899999999999999999999999999987532      246777765    466665432           13567


Q ss_pred             EEEEEE---CCHHHHHHHHHHCCCeEEee------CCCceEEEEEcCCCCeEEEEeec
Q 029285          147 HTCIAI---RDVSKLKMILDKAGISYTLS------KSGRPAIFTRDPDANALEFTQVD  195 (196)
Q Consensus       147 hi~f~v---~dl~~~~~~l~~~G~~~~~~------~~g~~~~~~~DPdG~~iEl~e~~  195 (196)
                      |++|.|   +|+++++++|+++|+++...      +.+++.++|+||+||.|||++..
T Consensus        67 ~~~~~v~~~~dld~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  124 (310)
T 3b59_A           67 VIALAADSRSDVDALRASVEAAGCKVASEPAVLATPGGGYGFRFFSPDGLLFEVSSDV  124 (310)
T ss_dssp             EEEEEESSHHHHHHHHHHHHHHTCCBCCCSEECCSTTCCEEEEEECTTSCEEEEEECC
T ss_pred             EEEEEeCCHHHHHHHHHHHHhCCCeEeecCccccccCCceEEEEECCCCCEEEEEEcc
Confidence            999999   68999999999999987543      24578999999999999999754

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A

Probab=99.60  E-value=5.1e-15  Score=121.72  Aligned_cols=112  Identities=16%  Similarity=0.143  Sum_probs=81.0

Q ss_pred             eeceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCC--CC-CceeEEEEeCCe--EEEEEecCCCCCCCCCCCCCCCce
Q 029285           72 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHD--KL-PYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDR  146 (196)
Q Consensus        72 ~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~--~~-~~~~~~l~~g~~--~l~l~~~~~~~~~~~~p~~~~~~~  146 (196)
                      .+.+++||.|.|+|+++|++|| ++|||++.......  .. ....+|+..++.  .+.+...         + ..++.+
T Consensus       143 ~~~~i~hv~l~v~D~~~s~~FY-~vLG~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~---------~-~~~~~~  211 (305)
T 2wl9_A          143 EGQGLGHIIIREDDVEEATRFY-RLLGLEGAVEYKFALPNGAVGTPVFMHCNDRHHSLAFGVG---------P-MDKRIN  211 (305)
T ss_dssp             TTTCSCEEEECCSCHHHHHHHH-HHHTCEEEECBCEECTTSCEECCEEEESSSSSCSEEECCS---------C-CSSSEE
T ss_pred             CCceeeeEEEECCCHHHHHHHH-HHcCCeeeeeEecccCCCccceEEEEEcCCCceEEEEecC---------C-CCCCce
Confidence            4578999999999999999999 99999987532111  11 123467776542  3333221         1 124678


Q ss_pred             EEEEEECC---HHHHHHHHHHCCCeEEeeC----C-CceEEEEEcCCCCeEEEEee
Q 029285          147 HTCIAIRD---VSKLKMILDKAGISYTLSK----S-GRPAIFTRDPDANALEFTQV  194 (196)
Q Consensus       147 hi~f~v~d---l~~~~~~l~~~G~~~~~~~----~-g~~~~~~~DPdG~~iEl~e~  194 (196)
                      |++|.|+|   +++++++|+++|+++...+    . +.+.+||+|||||.|||.+.
T Consensus       212 hiaf~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~  267 (305)
T 2wl9_A          212 HLMIEYTHLDDLGYAHDLVRQQKIDVTLQIGKHSNDEALTFYCANPSGWLWEPGWG  267 (305)
T ss_dssp             EEEEEESSHHHHHHHHHHHHHTTCCEEEEEEECTTTCCEEEEEECTTSSEEEEEEC
T ss_pred             EEEEEcCCHHHHHHHHHHHHHcCCCccccCcccCCCCcEEEEEECCCCCEEEEEeC
Confidence            99999998   5567889999999986542    2 35778999999999999873

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A*

Probab=99.59  E-value=1.7e-14  Score=118.01  Aligned_cols=112  Identities=13%  Similarity=0.242  Sum_probs=82.8

Q ss_pred             eeceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCC---CCCCceeEEEEeCC--eEEEEEecCCCCCCCCCCCCCCCce
Q 029285           72 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPH---DKLPYRGAWLWVGA--EMIHLMELPNPDPLSGRPEHGGRDR  146 (196)
Q Consensus        72 ~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~---~~~~~~~~~l~~g~--~~l~l~~~~~~~~~~~~p~~~~~~~  146 (196)
                      .+.+++|+.|.|+|++++++||+++|||++......   +.......|+..++  ..+.+...  +       . .++..
T Consensus       139 ~~~~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~--~-------~-~~~~~  208 (297)
T 1lgt_A          139 GEQGLGHFVRCVPDSDKALAFYTDVLGFQLSDVIDMKMGPDVTVPAYFLHCNERHHTLAIAAF--P-------L-PKRIH  208 (297)
T ss_dssp             GGGCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSBSCSEEEECC--C-------C-SSSEE
T ss_pred             CccccceEEEecCCHHHHHHHHHHhcCCeeeeEEeccCCCCccceEEEEEeCCCcceEEEEcC--C-------C-CCCce
Confidence            468999999999999999999999999998754211   11112346776654  34555532  1       1 24678


Q ss_pred             EEEEEECCHHHHH---HHHHHCCCeEEeeC----CC-ceEEEEEcCCCCeEEEEee
Q 029285          147 HTCIAIRDVSKLK---MILDKAGISYTLSK----SG-RPAIFTRDPDANALEFTQV  194 (196)
Q Consensus       147 hi~f~v~dl~~~~---~~l~~~G~~~~~~~----~g-~~~~~~~DPdG~~iEl~e~  194 (196)
                      |++|.|+|++++.   ++ +++|+++...+    .+ .+.+||+|||||.|||.+.
T Consensus       209 hiaf~v~d~~~~~~~~~~-~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~  263 (297)
T 1lgt_A          209 HFMLEVASLDDVGFAFDR-VDADGLITSTLGRHTNDHMVSFYASTPSGVEVEYGWS  263 (297)
T ss_dssp             EEEEEBSCHHHHHHHHHH-HHTTTCEEEEEEEESSSCCEEEEEECTTSCEEEEEEC
T ss_pred             EEEEeCCCHHHHHHHHHH-HhCCCcccccCcccCCCCcEEEEEECCCCcEEEEecC
Confidence            9999999988776   88 99999886543    23 4569999999999999874

>2r5v_A PCZA361.1; dioxygenase, non-heme iron, vancomycin, oxidoreductase; HET: HHH; 2.30A {Amycolatopsis orientalis}

Probab=99.59  E-value=2.1e-15  Score=127.01  Aligned_cols=126  Identities=14%  Similarity=0.221  Sum_probs=92.4

Q ss_pred             CCceeceeeEEEEEcC--CHHHHHHHHHhccCCEEeeecC--CCCCCceeEEEEeC--CeEEEEEecCCCCCCCC---C-
Q 029285           69 IDYGVVSVHHVGILCE--NLERSLEFYQNILGLEINEARP--HDKLPYRGAWLWVG--AEMIHLMELPNPDPLSG---R-  138 (196)
Q Consensus        69 ~~~~i~~l~hv~l~v~--Dl~~a~~FY~~vLG~~~~~~~~--~~~~~~~~~~l~~g--~~~l~l~~~~~~~~~~~---~-  138 (196)
                      .++.+++++||+|.|+  |++++++||+++|||++....+  .+....+.+|+..+  +..++|.+.........   . 
T Consensus       152 ~~~~~~~l~Hv~l~V~~~D~~~~~~FY~~vLGf~~~~~~~~~~~~~~~~~~~l~~~~g~~~l~l~~~~~~~~~~~~~~~~  231 (357)
T 2r5v_A          152 GDVDLLGIDHFAICLNAGDLGPTVEYYERALGFRQIFDEHIVVGAQAMNSTVVQSASGAVTLTLIEPDRNADPGQIDEFL  231 (357)
T ss_dssp             TTCCCCEEEEEEEECCTTCHHHHHHHHHHHHCCEEEEEEEEEETTEEEEEEEEECTTSCCEEEEEEECTTSBCCHHHHHH
T ss_pred             CCCCcceEeEEEEEEchhhHHHHHHHHHHhcCCcEEEEEeeccCCcceEEEEEECCCCCEEEEEeeecCCCCCchhHHHH
Confidence            3466889999999999  9999999999999999885431  11222355677764  35788877543211100   0 


Q ss_pred             -CCCCCCceEEEEEECCHHHHHHHHHHCCCeEEeeCC------Cc---------------eEEEEEcCCCCeEEEEee
Q 029285          139 -PEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKS------GR---------------PAIFTRDPDANALEFTQV  194 (196)
Q Consensus       139 -p~~~~~~~hi~f~v~dl~~~~~~l~~~G~~~~~~~~------g~---------------~~~~~~DPdG~~iEl~e~  194 (196)
                       ...+++++||||.|+|+++++++|+++|+++...+.      +.               ..+|++||||++|||++.
T Consensus       232 ~~~~~~g~~Hiaf~v~Di~~~~~~L~~~Gv~~~~~p~~yy~~~~~r~~~~~~~~~~~~~~~~l~~~Dp~G~llqi~t~  309 (357)
T 2r5v_A          232 KDHQGAGVQHIAFNSNDAVRAVKALSERGVEFLKTPGAYYDLLGERITLQTHSLDDLRATNVLADEDHGGQLFQIFTA  309 (357)
T ss_dssp             HHHTSSEEEEEEEECSCHHHHHHHHHHTTCCBCCCCHHHHHTTTTTCCCSSSCHHHHHHHTCEEEEETTEEEEEEEBC
T ss_pred             HhcCCCCccEEEEEcCCHHHHHHHHHHcCCCcCCCchhHHHHHHHhhccchhhHHHHHHcCeEEecCCCceEEEEEcc
Confidence             002457899999999999999999999998765531      11               379999999999999984

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B*

Probab=99.59  E-value=1.2e-14  Score=118.65  Aligned_cols=113  Identities=17%  Similarity=0.212  Sum_probs=82.3

Q ss_pred             ceeceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCC--CC-CceeEEEEeCC--eEEEEEecCCCCCCCCCCCCCCCc
Q 029285           71 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHD--KL-PYRGAWLWVGA--EMIHLMELPNPDPLSGRPEHGGRD  145 (196)
Q Consensus        71 ~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~--~~-~~~~~~l~~g~--~~l~l~~~~~~~~~~~~p~~~~~~  145 (196)
                      +.+.+++|+.|.|+|++++++||+++|||++.......  .. ....+|+..++  ..+.+...+.          .++.
T Consensus       138 ~~~~~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~  207 (292)
T 1kw3_B          138 TGDQGIGHFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNGRHHTIALAAFPI----------PKRI  207 (292)
T ss_dssp             CGGGCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSBSCSEEEECCSC----------SSSE
T ss_pred             cCCcccceEEEecCCHHHHHHHHHhccCCEEeeeeecccCCCccceEEEEEECCCcceEEEecCCC----------CCce
Confidence            56789999999999999999999999999987543211  00 12346777653  2455443211          2467


Q ss_pred             eEEEEEECCHHH---HHHHHHHCCCeEEeeC----C-CceEEEEEcCCCC-eEEEEee
Q 029285          146 RHTCIAIRDVSK---LKMILDKAGISYTLSK----S-GRPAIFTRDPDAN-ALEFTQV  194 (196)
Q Consensus       146 ~hi~f~v~dl~~---~~~~l~~~G~~~~~~~----~-g~~~~~~~DPdG~-~iEl~e~  194 (196)
                      +|++|.|+|+++   ++++|+ +|+++...+    . +.+.+||+||||| .|||.+.
T Consensus       208 ~hiaf~v~d~~~v~~~~~~l~-~G~~~~~~p~~~~~~~~~~~y~~DPdG~~~iEl~~~  264 (292)
T 1kw3_B          208 HHFMLQANTIDDVGYAFDRLD-AAGRITSLLGRHTNDQTLSFYADTPSPMIEVEFGWG  264 (292)
T ss_dssp             EEEEEEBSSHHHHHHHHHHHH-HTTCBCBCSEEESSSCCEEEEEECSSTTCEEEEEEC
T ss_pred             EEEEEEcCCHHHHHHHHHHHh-CCCceeecCcccCCCCeEEEEEECCCCCeeEEEEEC
Confidence            899999998765   577899 999876442    2 3567899999999 9999874

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis}

Probab=99.59  E-value=3e-14  Score=116.48  Aligned_cols=117  Identities=16%  Similarity=0.165  Sum_probs=84.2

Q ss_pred             eceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCeE-EEEEecCCCCCCCCCCCCCCCceEEEEE
Q 029285           73 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEM-IHLMELPNPDPLSGRPEHGGRDRHTCIA  151 (196)
Q Consensus        73 i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~-l~l~~~~~~~~~~~~p~~~~~~~hi~f~  151 (196)
                      ...+.|+.|.|.|++++++||+++|||++....+.... ....++..++.. ..+.......     +...+...+++|.
T Consensus        30 ~g~~~~v~l~v~D~~~a~~FY~~vlG~~~~~~~~~~~~-~~~~~~~~~g~~~~~l~~~~~~~-----~~~~~~~~~~~~~  103 (282)
T 3oxh_A           30 QGTPNWVDLQTTDQSAAKKFYTSLFGWGYDDNPVPGGG-GVYSMATLNGEAVAAIAPMPPGA-----PEGMPPIWNTYIA  103 (282)
T ss_dssp             TTSEEEEEEEESCHHHHHHHHHHHHCCEEEEEC------CCEEEEEETTEEEEEEEECCSCC--------CCCEEEEEEE
T ss_pred             CCCcEEEEEecCCHHHHHHHHHHhcCcEEeecCCCCCc-cCEEEEEeCCeeeEeeccCCCCC-----CCCCCCcEEEEEE
Confidence            45799999999999999999999999998865432110 023456666653 3344332211     1122345689999


Q ss_pred             ECCHHHHHHHHHHCCCeEEeeC----CCceEEEEEcCCCCeEEEEeec
Q 029285          152 IRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQVD  195 (196)
Q Consensus       152 v~dl~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~iEl~e~~  195 (196)
                      |+|+++++++++++|+++..++    ..++.++|+||+||.|||++..
T Consensus       104 v~d~d~~~~~l~~~G~~~~~~p~~~~~~g~~~~~~DP~G~~i~l~~~~  151 (282)
T 3oxh_A          104 VDDVDAVVDKVVPGGGQVMMPAFDIGDAGRMSFITDPTGAAVGLWQAN  151 (282)
T ss_dssp             CSCHHHHHTTTTTTTCEEEEEEEEETTTEEEEEEECTTCCEEEEEEES
T ss_pred             eCCHHHHHHHHHHCCCEEEECCEecCCCeEEEEEECCCCCEEEEEEcc
Confidence            9999999999999999986543    3468999999999999999864

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A

Probab=99.58  E-value=9.3e-15  Score=120.09  Aligned_cols=112  Identities=14%  Similarity=0.151  Sum_probs=79.4

Q ss_pred             eeceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCC--CC-CceeEEEEeCCe--EEEEEecCCCCCCCCCCCCCCCce
Q 029285           72 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHD--KL-PYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDR  146 (196)
Q Consensus        72 ~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~--~~-~~~~~~l~~g~~--~l~l~~~~~~~~~~~~p~~~~~~~  146 (196)
                      ..++++|+.|.|+|++++++|| ++|||++......+  .. ....+|+..++.  .+.+..  .       + ..++.+
T Consensus       146 ~~~~l~hv~l~v~D~~~a~~FY-~~lG~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~-------~-~~~~~~  214 (302)
T 2ehz_A          146 GDQGLGHCIVRQTDVAEAHKFY-SLLGFRGDVEYRIPLPNGMTAELSFMHCNARDHSIAFGA--M-------P-AAKRLN  214 (302)
T ss_dssp             GGGCSCEEEECCSCHHHHHHHH-HHTTCBCCEEEEEECTTSCEEEEEEEBSSSBSCSEEECS--C-------C-CSSSEE
T ss_pred             CCCccceEEEEcCCHHHHHHHH-HhcCCeeeeEEeccCCCCcceEEEEEEeCCCCcEEEEec--C-------C-CCCcee
Confidence            3568999999999999999999 99999986432111  11 123456665532  233221  1       1 124678


Q ss_pred             EEEEEECCHHH---HHHHHHHCCCeEEeeC----C-CceEEEEEcCCCCeEEEEee
Q 029285          147 HTCIAIRDVSK---LKMILDKAGISYTLSK----S-GRPAIFTRDPDANALEFTQV  194 (196)
Q Consensus       147 hi~f~v~dl~~---~~~~l~~~G~~~~~~~----~-g~~~~~~~DPdG~~iEl~e~  194 (196)
                      |++|.|+|+++   ++++|+++|+++..++    . +.+.+|++|||||.|||.+.
T Consensus       215 hiaf~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iEl~~~  270 (302)
T 2ehz_A          215 HLMLEYTHMEDLGYTHQQFVKNEIDIALQLGIHANDKALTFYGATPSGWLIEPGWR  270 (302)
T ss_dssp             EEEEEESSHHHHHHHHHHHHHTTCCEEEEEEECTTTCCEEEEEECTTSSEEEEEEC
T ss_pred             EEEEEcCCHHHHHHHHHHHHHCCCcEEeCCcccCCCCceEEEEECCCCcEEEEEEC
Confidence            99999998775   5779999999986542    2 35789999999999999864

>1xy7_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G48480, reductively methylated protein, CATH 3.10.180 fold; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.9 PDB: 2q48_A

Probab=99.56  E-value=9.3e-14  Score=105.18  Aligned_cols=116  Identities=12%  Similarity=0.086  Sum_probs=79.2

Q ss_pred             eeeEEEEEcCC--HHHHHHHHHhccCCEEeeec-------CCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCC--C
Q 029285           75 SVHHVGILCEN--LERSLEFYQNILGLEINEAR-------PHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHG--G  143 (196)
Q Consensus        75 ~l~hv~l~v~D--l~~a~~FY~~vLG~~~~~~~-------~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~p~~~--~  143 (196)
                      .-.++.|.|+|  +++|++||+++|||++....       +........+.+..++..+.+.......   ..+...  +
T Consensus        24 ~~i~~~L~v~D~~~~~A~~FY~~vfG~~~~~~~~~~~~~~~~~~~~~~~a~l~~~g~~l~l~~~~~~~---~~~~~~~~~  100 (166)
T 1xy7_A           24 TEFKQMLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLAGSSFVVCDVSSLP---GFSTAKSEG  100 (166)
T ss_dssp             EEEEEEEEECTTCHHHHHHHHHHHHCCEEC---------------CCCEEEEEETTEEEEEEEGGGST---TCCCCCTTS
T ss_pred             ceEEEEEEECCcCHHHHHHHHHHHhCCEEEEEEccCCCCCCCCCCcEEEEEEEECCeEEEEeCCCccc---CCccccCCC
Confidence            34688999999  99999999999999987533       1111122334567777777665421110   111111  1


Q ss_pred             CceEEEEEECCHHHHHHHHHHCCCeEEeeC------CCceEEEEEcCCCCeEEEEeec
Q 029285          144 RDRHTCIAIRDVSKLKMILDKAGISYTLSK------SGRPAIFTRDPDANALEFTQVD  195 (196)
Q Consensus       144 ~~~hi~f~v~dl~~~~~~l~~~G~~~~~~~------~g~~~~~~~DPdG~~iEl~e~~  195 (196)
                      ...|++|.|+|+++++++|+++|++ ..++      + ++.++|+||+||.|+|.+..
T Consensus       101 ~g~~l~~~vdDvda~~~~l~~~G~~-~~~~~~~~~~~-~r~~~v~DP~G~~~~l~~~~  156 (166)
T 1xy7_A          101 SGVTFLLGTKDAEAAVAKAVDAGAV-KVEVTEAEVEL-GFKGKVTDPFGVTWIFAEKK  156 (166)
T ss_dssp             CCCEEEEECSCHHHHHHHHHHTTCE-ECCCCHHHHHT-TEEEEEECTTSCEEEEEC--
T ss_pred             CcEEEEEEcCCHHHHHHHHHHCCCE-ECCcccccCcc-cEEEEEECCCCCEEEEEeec
Confidence            2248999999999999999999998 6543      3 68999999999999998753

>1t47_A 4-hydroxyphenylpyruvate dioxygenase; triketone inhibitor, iron, oxidoreductase; HET: NTD; 2.50A {Streptomyces avermitilis} SCOP: d.32.1.3 d.32.1.3

Probab=99.54  E-value=5.6e-14  Score=119.67  Aligned_cols=128  Identities=12%  Similarity=0.076  Sum_probs=95.2

Q ss_pred             CCCceeceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCC--CCCCceeEEEEeCCeEEEEEecCCCCCC----CCC--C
Q 029285           68 KIDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPH--DKLPYRGAWLWVGAEMIHLMELPNPDPL----SGR--P  139 (196)
Q Consensus        68 ~~~~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~--~~~~~~~~~l~~g~~~l~l~~~~~~~~~----~~~--p  139 (196)
                      .++|.+++++||.|.|.|++++++||+++|||+++.+...  .........+..++..+.|.....+...    ...  .
T Consensus        15 ~~~~~i~~i~hV~i~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~~~~~~g~~~l~l~~~~~~~~~~~~~~~~~~~   94 (381)
T 1t47_A           15 ADPFPVKGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSARFVLTSVIKPATPWGHFLADHVA   94 (381)
T ss_dssp             -CCSCCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEEESSCCSHHHHHHHHHHH
T ss_pred             CCCCcCceEEEEEEEECCHHHHHHHHHHcCCCEEEEEEcCCCCCceEEEEEEecCCEEEEEecCCCCCCcchhHHHHHHH
Confidence            3578899999999999999999999999999999875321  1112234556677778888865332211    000  1


Q ss_pred             CCCCCceEEEEEECCHHHHHHHHHHCCCeEEeeCC----C---ceEEEEEcCCCCeEEEEeec
Q 029285          140 EHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKS----G---RPAIFTRDPDANALEFTQVD  195 (196)
Q Consensus       140 ~~~~~~~hi~f~v~dl~~~~~~l~~~G~~~~~~~~----g---~~~~~~~DPdG~~iEl~e~~  195 (196)
                      .++.+..|++|.|+|+++++++++++|+++..++.    +   ...+.++||+|+.++|++..
T Consensus        95 ~~g~gv~~iaf~V~D~~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~~pgg~~~~lv~~~  157 (381)
T 1t47_A           95 EHGDGVVDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEHGTVVLAAIATYGKTRHTLVDRT  157 (381)
T ss_dssp             HHCSEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEE
T ss_pred             hcCCceEEEEEEECCHHHHHHHHHHcCCEEeeccccccCCCCeEEEEEEecCCCcEEEEEecC
Confidence            13568899999999999999999999999865431    2   25688999999999999863

>2zw5_A Bleomycin acetyltransferase; dimer, two domains; HET: COA; 2.40A {Streptomyces verticillus} PDB: 2zw4_A* 2zw6_A 2zw7_A*

Probab=99.52  E-value=3.8e-13  Score=109.27  Aligned_cols=109  Identities=13%  Similarity=0.054  Sum_probs=79.2

Q ss_pred             eeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCC----eEEEEEecCCCCCCCCCCCCCCCceEEEE
Q 029285           75 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA----EMIHLMELPNPDPLSGRPEHGGRDRHTCI  150 (196)
Q Consensus        75 ~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~----~~l~l~~~~~~~~~~~~p~~~~~~~hi~f  150 (196)
                      ...++.|.|.|+++|++||+++|||++....+.+   ...+++..++    ..+.+...+.        ..++...+++|
T Consensus       183 ~~~~~~l~v~D~~~a~~FY~~~lG~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~  251 (301)
T 2zw5_A          183 LAVITELPVRDVAATLRLVEAALGARTAFAIGDP---PEFAEAALTPWSAGPRFRLAAVPG--------PGPVEPVRLHL  251 (301)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHHSCCEEEEEEETT---EEEEEEESSSSSSSSEEEEEECCC--------SSCCCCCEEEE
T ss_pred             ceeEEEEEeCCHHHHHHHHHHhcCCeEeeecCCC---ccEEEEEcCCCccccccccccCCC--------cCCCCceEEEE
Confidence            3468899999999999999999999988533321   1223455555    3333322111        11123458999


Q ss_pred             EEC-CHHHHHHHHHHCCCeEEeeC----CCceEEEEEcCCCCeEEEEee
Q 029285          151 AIR-DVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQV  194 (196)
Q Consensus       151 ~v~-dl~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~iEl~e~  194 (196)
                      .|+ |++++++++.++|+++..++    +|.+.++|+|||||.|+|.++
T Consensus       252 ~v~~dvd~~~~~~~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~~~~~~~  300 (301)
T 2zw5_A          252 DAAGTADSLHRRAVDAGARVDGPPVRRPWGRSEFVITLPEGHELTVSAP  300 (301)
T ss_dssp             EEESCHHHHHHHHHHTTCCEEEEEEECTTSCEEEEEECTTSCEEEEEEC
T ss_pred             EcCccHHHHHHHHHHcCCccccCcccCCCcceEEEEECCCCCEEEeeCC
Confidence            999 99999999999999986543    467899999999999999985

>4ghg_A Homoprotocatechuate 2,3-dioxygenase; oxygen activation, Fe(II), 2-His-1-carboxylate triad, 4-nitrocatechol, OXY complex, oxidoreductase; HET: P6G PG4 DHY; 1.50A {Brevibacterium fuscum} PDB: 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* 3ojn_A* 4ghh_A* 4ghc_A 4ghd_A* 4ghe_A* 4ghf_A* 3eck_A* 3ecj_A*

Probab=99.51  E-value=3.1e-13  Score=114.55  Aligned_cols=114  Identities=18%  Similarity=0.254  Sum_probs=86.0

Q ss_pred             CCceeceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCe--EEEEEecCCCCCCCCCCCCCCCce
Q 029285           69 IDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDR  146 (196)
Q Consensus        69 ~~~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~--~l~l~~~~~~~~~~~~p~~~~~~~  146 (196)
                      ....+.+++||.|.|.|++++.+||++ |||.+.............+|+..++.  .+.+...           .+++++
T Consensus       146 ~~~~~~rlgHV~L~v~D~~~t~~Fy~~-LGf~~sd~~~~~~g~~~~~f~~~~~~hH~la~~~~-----------~~~~lh  213 (365)
T 4ghg_A          146 SAGELVRLDHFNQVTPDVPRGRKYLED-LGFRVTEDIQDDEGTTYAAWMHRKGTVHDTALTGG-----------NGPRLH  213 (365)
T ss_dssp             CTTCCCEEEEEEEEESCHHHHHHHHHH-TTCEEEEEEECTTSCEEEEEEESSSSSCSEEEEES-----------SBSEEE
T ss_pred             ccccCcceeEEEEeecCHHHHHHHHHh-cCCEEEEEEecCCCceeEEeeecCCcccceeeecC-----------CCCcee
Confidence            345678999999999999999999987 99998876655555556788887754  3333321           124789


Q ss_pred             EEEEEECCHHHH---HHHHHHCCCe--EEeeC-----CCceEEEEEcCCCCeEEEEee
Q 029285          147 HTCIAIRDVSKL---KMILDKAGIS--YTLSK-----SGRPAIFTRDPDANALEFTQV  194 (196)
Q Consensus       147 hi~f~v~dl~~~---~~~l~~~G~~--~~~~~-----~g~~~~~~~DPdG~~iEl~e~  194 (196)
                      |++|.|+|++++   .++|.++|+.  +.+.+     ....++||+||+||.+|+...
T Consensus       214 Hvaf~v~d~d~v~~~~d~l~~~g~~~~i~~GpgRH~~~~~~f~Y~~dP~G~~iE~~t~  271 (365)
T 4ghg_A          214 HVAFSTHEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDNHRIEIYTQ  271 (365)
T ss_dssp             EEEEECSSHHHHHHHHHHHHHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEEC
T ss_pred             EEEEecCCHHHHHHHHHHHHhCCCCceeEeCCCccCCCCcEEEEEECCCCceEEEEcC
Confidence            999999988765   6788899984  44332     346789999999999999763

>1sqd_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.3 d.32.1.3 PDB: 1tfz_A* 1tg5_A* 1sp9_A

Probab=99.49  E-value=4.9e-13  Score=115.49  Aligned_cols=126  Identities=13%  Similarity=0.129  Sum_probs=93.1

Q ss_pred             CceeceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCC--CCCceeEEEEeCCeEEEEEecCCCCC------------C
Q 029285           70 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHD--KLPYRGAWLWVGAEMIHLMELPNPDP------------L  135 (196)
Q Consensus        70 ~~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~--~~~~~~~~l~~g~~~l~l~~~~~~~~------------~  135 (196)
                      .|.+++++||.|+|.|+++|++||+++|||++..+.+.+  .......++..++..+.|.....+..            .
T Consensus        20 ~~~i~~i~HV~i~V~Dle~a~~FY~~~LGf~~v~~~~~~~g~~~~~~~~l~~g~~~l~L~~~~~~~~~~~~~~~~~~~p~   99 (424)
T 1sqd_A           20 KFKVKRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGDLRFLFTAPYSPSLSAGEIKPTTTASI   99 (424)
T ss_dssp             SSCEEEEEEEEEECSCHHHHHHHHHHHHTCEEEEEESGGGTCSSEEEEEEEETTEEEEEEEECCGGGTTTCCGGGCCCSS
T ss_pred             cccCCeEEEEEEEECCHHHHHHHHHHcCCCEEEEEEcCCCCceeEEEEEEcCCCEEEEEecCCCCccccccccccccccc
Confidence            677899999999999999999999999999998764322  12233455677788888887632210            0


Q ss_pred             CCC---------CCCCCCceEEEEEECCHHHHHHHHHHCCCeEEeeC----CCceEEEEEcCCCCeEEEEeec
Q 029285          136 SGR---------PEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQVD  195 (196)
Q Consensus       136 ~~~---------p~~~~~~~hi~f~v~dl~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~iEl~e~~  195 (196)
                      +..         ..++.+.+|++|.|+|+++++++++++|+++..++    .+.....+++|+|+.++|++.+
T Consensus       100 ~~~~~~~~~~~~~~~g~gv~~iAf~VdDvdaa~~~l~a~Ga~~~~~P~~~~~~~~~~~i~~~Gg~~~~lvd~~  172 (424)
T 1sqd_A          100 PSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGAIPSSPPIVLNEAVTIAEVKLYGDVVLRYVSYK  172 (424)
T ss_dssp             TTCCHHHHHHHHHHHCSEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEEETTTEEEEEEEEETTEEEEEEEEC
T ss_pred             ccccchHHHHHHHhcCCeEEEEEEEeCCHHHHHHHHHHcCCEEeecCcCCCCceEEEEEEcCCCcEEEEEecC
Confidence            000         12346889999999999999999999999986543    2335667778888888887754

>2r5v_A PCZA361.1; dioxygenase, non-heme iron, vancomycin, oxidoreductase; HET: HHH; 2.30A {Amycolatopsis orientalis}

Probab=99.49  E-value=1.4e-13  Score=115.86  Aligned_cols=123  Identities=15%  Similarity=0.092  Sum_probs=90.7

Q ss_pred             ceeceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCeEEEEEecCCCCCCCC--CCCCCCCceEE
Q 029285           71 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSG--RPEHGGRDRHT  148 (196)
Q Consensus        71 ~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~--~p~~~~~~~hi  148 (196)
                      |.+++++||.|.|.|++++++||+++|||+++.+....+.  ....+..|+..+.|.....+.....  ...++.+..|+
T Consensus         1 ~~i~~l~hv~~~v~D~~~a~~fy~~~LGf~~~~~~~~~~g--~~~~~~~g~~~l~l~~~~~~~~~~~~~~~~~g~g~~~i   78 (357)
T 2r5v_A            1 MQNFEIDYVEMYVENLEVAAFSWVDKYAFAVAGTSRSADH--RSIALRQGQVTLVLTEPTSDRHPAAAYLQTHGDGVADI   78 (357)
T ss_dssp             -CCCEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTE--EEEEEEETTEEEEEEEESSTTSHHHHHHHHHSSEEEEE
T ss_pred             CCCceEEEEEEEECCHHHHHHHHHHcCCCeEEEEEcCCCc--eEEEEEeCCEEEEEeCCCCCCCHHHHHHHhcCCeEEEE
Confidence            4578999999999999999999999999999875432211  3344566777777775322211000  01134578899


Q ss_pred             EEEECCHHHHHHHHHHCCCeEEeeC----CC-ceEEEEEcCCCCeEEEEeec
Q 029285          149 CIAIRDVSKLKMILDKAGISYTLSK----SG-RPAIFTRDPDANALEFTQVD  195 (196)
Q Consensus       149 ~f~v~dl~~~~~~l~~~G~~~~~~~----~g-~~~~~~~DPdG~~iEl~e~~  195 (196)
                      +|.|+|+++++++++++|+++...+    .| ...+.++||+|..++|++..
T Consensus        79 af~V~D~~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~~p~g~~~~lv~~~  130 (357)
T 2r5v_A           79 AMATSDVAAAYEAAVRAGAEAVRAPGQHSEAAVTTATIGGFGDVVHTLIQRD  130 (357)
T ss_dssp             EEEESCHHHHHHHHHHTTCCEEEEEECCC-CCCCEEEEECSTTCEEEEEECC
T ss_pred             EEEECCHHHHHHHHHHcCCeEeECcEecCCCeEEEEEEeccCCeEEEEEecc
Confidence            9999999999999999999986543    23 35788999999999998853

>1u6l_A Hypothetical protein; structural genomics, PSI, protein STRU initiative, NEW YORK SGX research center for structural GEN nysgxrc; 2.81A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=99.44  E-value=8e-12  Score=92.76  Aligned_cols=112  Identities=14%  Similarity=0.039  Sum_probs=77.7

Q ss_pred             EEEEEcC-CHHHHHHHHHhccCCEEeeecCCCC------------CCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCC
Q 029285           78 HVGILCE-NLERSLEFYQNILGLEINEARPHDK------------LPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGR  144 (196)
Q Consensus        78 hv~l~v~-Dl~~a~~FY~~vLG~~~~~~~~~~~------------~~~~~~~l~~g~~~l~l~~~~~~~~~~~~p~~~~~  144 (196)
                      +..|.|. |+++|++||+++||+++.......+            .....+-+..++..+.+.... +.  ...+. ..+
T Consensus         6 ~p~L~v~~d~~~A~~FY~~vfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~l~~~~~~l~~~d~~-~~--~~~~~-~~g   81 (149)
T 1u6l_A            6 VPYLIFNGNCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPADWKDKIMHARLVVGSFALMASDNH-PA--YPYEG-IKG   81 (149)
T ss_dssp             EEEEEESSCHHHHHHHHHHHHCSEEEEEEESTTTTC----CCSSCCCEEEEEEEETTEEEEEEECC-TT--SCCCC-CCS
T ss_pred             EEEEEECCCHHHHHHHHHHHhCCEEEEEEEcccCCcccCCCcccCCcEEEEEEEECCEEEEEEcCC-Cc--cCCCC-CCc
Confidence            4788898 9999999999999999875421110            112234466777766655421 11  01121 122


Q ss_pred             ceEEEEEECC---HHHHHHHHHHCCCeEEee----CCCceEEEEEcCCCCeEEEEeec
Q 029285          145 DRHTCIAIRD---VSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVD  195 (196)
Q Consensus       145 ~~hi~f~v~d---l~~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdG~~iEl~e~~  195 (196)
                       .+++|.|+|   +++++++|+ .|.++..+    ++|.+.++|+||+|+.|+|.+..
T Consensus        82 -~~l~~~v~d~~evd~~~~~l~-~Gg~i~~p~~~~~wG~r~~~v~Dp~G~~w~l~~~~  137 (149)
T 1u6l_A           82 -CSISLNVDSKAEAERLFNALA-EGGSVQMPLGPTFWAASFGMFTDRFGVAWMVNCEQ  137 (149)
T ss_dssp             -EEEEEECSSHHHHHHHHHHHH-TTSEEEEEEEEETTEEEEEEEECTTSCEEEEEESC
T ss_pred             -eEEEEEcCCHHHHHHHHHHHH-CCCEEeecccccCcccceEEEECCCCCEEEEEEec
Confidence             489999998   789999985 78887544    35678899999999999998753

>1u7i_A Hypothetical protein; structural genomics, PA1358, PSI, PROT structure initiative; HET: MSE; 1.40A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=99.41  E-value=1.9e-11  Score=89.20  Aligned_cols=110  Identities=11%  Similarity=0.093  Sum_probs=77.4

Q ss_pred             EEEEcC--CHHHHHHHHHhcc-CCEEeee--cCC----CCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEE
Q 029285           79 VGILCE--NLERSLEFYQNIL-GLEINEA--RPH----DKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTC  149 (196)
Q Consensus        79 v~l~v~--Dl~~a~~FY~~vL-G~~~~~~--~~~----~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~p~~~~~~~hi~  149 (196)
                      ..|.+.  |+++|++||+++| |+++...  .+.    .......+-+..++..+.+.......   ..+  .+....++
T Consensus         9 ~~L~v~~~d~~~A~~FY~~~f~G~~~~~~~~~~~~~~~~~~~~~~a~~~~~g~~~~~~~~~~~~---~~~--~~~~~~l~   83 (136)
T 1u7i_A            9 PFLMFQGVQAEAAMNFYLSLFDDAEILQIQRYGAEGPGPEGSVLKALFRLGDQSVHCIDSHVRH---AFD--FTPAFSFF   83 (136)
T ss_dssp             EEEEEESSCHHHHHHHHHHHCSSEEEEEEEECCTTCSSCTTSEEEEEEEETTEEEEEEEESSCC---SCC--CCTTEEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHcCCCEeeEEEEcccCCCCCCCcEEEEEEEECCEEEEEECCCCCC---CCC--CCCceEEE
Confidence            667776  9999999999999 9998752  211    11122344566777766555432111   111  12224799


Q ss_pred             EEECC---HHHHHHHHHHCCCeEEee----CCCceEEEEEcCCCCeEEEEee
Q 029285          150 IAIRD---VSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  194 (196)
Q Consensus       150 f~v~d---l~~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdG~~iEl~e~  194 (196)
                      |.|+|   +++++++|. +|.++..+    ++|.+.++++||+|+.|+|.+.
T Consensus        84 ~~v~d~~evd~~~~~l~-~Gg~v~~p~~~~~~G~~~~~~~Dp~G~~w~l~~~  134 (136)
T 1u7i_A           84 VDCESNAQIERLAEALS-DGGKALMPLGDYGFSQRFAWLADRFGVSWQLNLA  134 (136)
T ss_dssp             EECCCHHHHHHHHHHHH-TTSEEEEEEECCSSSSEEEEEECTTSCEEEEEEC
T ss_pred             EEcCCHHHHHHHHHHHH-cCCEEecccccCCCcceEEEEECCCCCEEEEEec
Confidence            99999   999999999 99988654    3567889999999999999874

>1t47_A 4-hydroxyphenylpyruvate dioxygenase; triketone inhibitor, iron, oxidoreductase; HET: NTD; 2.50A {Streptomyces avermitilis} SCOP: d.32.1.3 d.32.1.3

Probab=99.39  E-value=1.4e-12  Score=110.97  Aligned_cols=127  Identities=13%  Similarity=0.133  Sum_probs=90.4

Q ss_pred             CCceeceeeEEEEEcC--CHHHHHHHHHhccCCEEeeecC-----CCCCCceeEEEEeC--CeEEEEEecCCCCCCCC--
Q 029285           69 IDYGVVSVHHVGILCE--NLERSLEFYQNILGLEINEARP-----HDKLPYRGAWLWVG--AEMIHLMELPNPDPLSG--  137 (196)
Q Consensus        69 ~~~~i~~l~hv~l~v~--Dl~~a~~FY~~vLG~~~~~~~~-----~~~~~~~~~~l~~g--~~~l~l~~~~~~~~~~~--  137 (196)
                      ....+.+++||++.|+  |++++++||+++|||++....+     .+....+..++..+  ...+.|.+.........  
T Consensus       178 ~~~~~~~idHv~l~V~~~dl~~a~~FY~~vLGf~~~~~~~~~~i~~~~~~~~~~~l~~~~g~v~i~l~~~~~~~~~s~~~  257 (381)
T 1t47_A          178 AHRTFQAIDHCVGNVELGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADGTLKVKFPINEPALAKKKSQID  257 (381)
T ss_dssp             SSCSCCEEEEEEEECCTTCHHHHHHHHHHHHCCEECSCCBCHHHHTTTTSEEEEEEECTTSCSEEEEEEECCSSSCCHHH
T ss_pred             CCCCceEEeEEEEeeccccHHHHHHHHHHhhCCEEeeecCcceeccCCccEEEEEEECCCCcEEEEEecCCcCCCccHHH
Confidence            3456789999999999  9999999999999999886532     22223345556543  34677776542111100  


Q ss_pred             C--C-CCCCCceEEEEEECCHHHHHHHHHHCCCeEEeeCCC---------------------ceEEEEEcCCCCeEEEEe
Q 029285          138 R--P-EHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSG---------------------RPAIFTRDPDANALEFTQ  193 (196)
Q Consensus       138 ~--p-~~~~~~~hi~f~v~dl~~~~~~l~~~G~~~~~~~~g---------------------~~~~~~~DPdG~~iEl~e  193 (196)
                      .  . ..+++++||||.|+|+.+++++|+++|+++...+..                     ...++-+||+|+.++|++
T Consensus       258 ~~l~~~~g~Gv~HiAf~vdDi~~~~~~L~~~Gv~~~~~p~~Yy~~l~~R~~~~~~~~~~l~~~~il~d~d~~g~llqift  337 (381)
T 1t47_A          258 EYLEFYGGAGVQHIALNTGDIVETVRTMRAAGVQFLDTPDSYYDTLGEWVGDTRVPVDTLRELKILADRDEDGYLLQIFT  337 (381)
T ss_dssp             HHHHHHTSCEEEEEEEECSCHHHHHHHHHHTTCCBCCCCGGGTTSHHHHHCCCSSCHHHHHHHTCEEEECSSCEEEEEEB
T ss_pred             HHHHHhCCCCcceEEEecCCHHHHHHHHHHcCCccCCCCccHHHHHHHhccccchhHHHHHHhCeEEeeCCCCeEEEEec
Confidence            0  0 135678999999999999999999999998655421                     124777999999999987


Q ss_pred             ec
Q 029285          194 VD  195 (196)
Q Consensus       194 ~~  195 (196)
                      .+
T Consensus       338 ~~  339 (381)
T 1t47_A          338 KP  339 (381)
T ss_dssp             CC
T ss_pred             cC
Confidence            43

>1sp8_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 2.00A {Zea mays} SCOP: d.32.1.3 d.32.1.3

Probab=99.38  E-value=9.4e-12  Score=107.26  Aligned_cols=127  Identities=13%  Similarity=0.116  Sum_probs=91.3

Q ss_pred             CCceeceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCC--CCceeEEEEeCCeEEEEEecCCCCC------CC----
Q 029285           69 IDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDK--LPYRGAWLWVGAEMIHLMELPNPDP------LS----  136 (196)
Q Consensus        69 ~~~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~--~~~~~~~l~~g~~~l~l~~~~~~~~------~~----  136 (196)
                      ..+.+++++||.|.|.|++++++||++.|||++..+.+.+.  ......++..|+..+.|.....+..      .+    
T Consensus        25 ~~~~i~~l~hV~i~V~Dle~a~~fY~~~LGf~~~~~~~~~~G~~~~~~~~~~~G~~~l~L~~~~~~~~~~~~~p~~~~~~  104 (418)
T 1sp8_A           25 DRFHTLAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGSLSFLFTAPYAHGADAATAALPSFSA  104 (418)
T ss_dssp             CSSCEEEEEEEEEECSCHHHHHHHHHHHHTCCEEEEESGGGTCCSEEEEEEEETTEEEEEEEECCSSCCGGGCSSTTCCH
T ss_pred             ccccCceEEEEEEEeCCHHHHHHHHHHhCCCEEEEEEcCCCCCcceEEEEEeeCCEEEEEecCCCCcccccccccccccc
Confidence            36778999999999999999999999999999987643221  1234455677888888886633211      00    


Q ss_pred             C-----CCCCCCCceEEEEEECCHHHHHHHHHHCCCeEEeeC----CCceEEEEEcCCCCeEEEEeec
Q 029285          137 G-----RPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQVD  195 (196)
Q Consensus       137 ~-----~p~~~~~~~hi~f~v~dl~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~iEl~e~~  195 (196)
                      .     ...++.+.+|++|.|+|+++++++++++|+++...+    .+.+...+++|+|..++|++.+
T Consensus       105 ~~~~~~~~~hg~gv~~iAf~V~Dv~~a~~~l~~~Ga~~~~~p~~~~~~~~~~~i~~~Gg~~~~lvd~~  172 (418)
T 1sp8_A          105 AAARRFAADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPVDLGRGFRLAEVELYGDVVLRYVSYP  172 (418)
T ss_dssp             HHHHHHHHHHSSEEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEEETTEEEEEEEEETTEEEEEEECC
T ss_pred             hhHHHHHhhcCCeeEEEEEEeCCHHHHHHHHHHCCCEEEeccccccCceEEEEEecCCCEEEEEEccC
Confidence            0     012456889999999999999999999999886543    2234455667777777766643

>1cjx_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase, iron; 2.40A {Pseudomonas fluorescens} SCOP: d.32.1.3 d.32.1.3

Probab=99.35  E-value=4.4e-13  Score=113.07  Aligned_cols=127  Identities=13%  Similarity=0.100  Sum_probs=88.5

Q ss_pred             CCceeceeeEEEEEcC--CHHHHHHHHHhccCCEEeeecCCCC--CCc--eeEEEEeCCeEEEEEec-CCCCCCCCC---
Q 029285           69 IDYGVVSVHHVGILCE--NLERSLEFYQNILGLEINEARPHDK--LPY--RGAWLWVGAEMIHLMEL-PNPDPLSGR---  138 (196)
Q Consensus        69 ~~~~i~~l~hv~l~v~--Dl~~a~~FY~~vLG~~~~~~~~~~~--~~~--~~~~l~~g~~~l~l~~~-~~~~~~~~~---  138 (196)
                      .+..+.+++||++.|+  |++++++||+++|||++....+...  ...  ..+++..++..++|.+. .........   
T Consensus       152 ~~~~i~~idHv~l~V~~~dl~~a~~FY~~vLGf~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~L~~~~~~~~~~~~~~~~  231 (357)
T 1cjx_A          152 VGAGLKVIDHLTHNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAPDGMIRIPLNEESSKGAGQIEEFLM  231 (357)
T ss_dssp             CTTSEEEEEEECEECCTTHHHHHHHHHHHHHCCEEEEEEEEECSSCEEEEEEEECTTSSCEEEEEEECTTCCSHHHHHHH
T ss_pred             CCCCeeEECceEEeechhhHHHHHHHHHHhhCCceeeEEEeccCCcceEEEEEECCCCCEEEEEeeecCCCCChHHHhHH
Confidence            3456889999999999  9999999999999999886543111  111  12233334568888876 322111000   


Q ss_pred             CCCCCCceEEEEEECCHHHHHHHHHHCCCeEEe-eCC-------------Cc--------eEEEEEc----CCCCeEEEE
Q 029285          139 PEHGGRDRHTCIAIRDVSKLKMILDKAGISYTL-SKS-------------GR--------PAIFTRD----PDANALEFT  192 (196)
Q Consensus       139 p~~~~~~~hi~f~v~dl~~~~~~l~~~G~~~~~-~~~-------------g~--------~~~~~~D----PdG~~iEl~  192 (196)
                      ...+++.+||||.|+|+++++++|+++|+++.. .+.             +.        ..++-+|    |+|+.++|+
T Consensus       232 ~~~g~g~~HiAf~v~Di~~~~~~L~~~Gv~~~~~~p~~Yy~~l~~r~~~~~~~~~~l~~~~il~d~d~~~~~~g~llqif  311 (357)
T 1cjx_A          232 QFNGEGIQHVAFLTDDLVKTWDALKKIGMRFMTAPPDTYYEMLEGRLPDHGEPVDQLQARGILLDGSSVEGDKRLLLQIF  311 (357)
T ss_dssp             HHTSSBCCEEEEEESCHHHHHHHHHHTTCCBCCCCCHHHHHTHHHHSTTCCCCHHHHHHHTCEEEEEEETTEEEEEEEEE
T ss_pred             hcCCCCeeEEEEEcCCHHHHHHHHHHcCCcccCCCChHHHHHHHHHhccccccHHHHHHcCeEEecCCCCCCCCeEEEEe
Confidence            013457899999999999999999999999866 331             11        1477788    889999998


Q ss_pred             eec
Q 029285          193 QVD  195 (196)
Q Consensus       193 e~~  195 (196)
                      +.+
T Consensus       312 t~~  314 (357)
T 1cjx_A          312 SET  314 (357)
T ss_dssp             BCC
T ss_pred             ccC
Confidence            743

>1tsj_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, nysgxrc; 2.60A {Staphylococcus aureus subsp} SCOP: d.32.1.7

Probab=99.34  E-value=3.8e-11  Score=88.40  Aligned_cols=112  Identities=8%  Similarity=0.098  Sum_probs=76.5

Q ss_pred             eceeeEEEEEcCCHHHHHHHHHhcc-CCEEeeecCCC------CCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCc
Q 029285           73 VVSVHHVGILCENLERSLEFYQNIL-GLEINEARPHD------KLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRD  145 (196)
Q Consensus        73 i~~l~hv~l~v~Dl~~a~~FY~~vL-G~~~~~~~~~~------~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~p~~~~~~  145 (196)
                      ++++....+.+.|+++|++||+++| |+++.......      +.....+-+..++..+.+.... +.    .+   .. 
T Consensus         3 ~~~i~p~l~~~~d~~eA~~FY~~~f~G~~~~~~~~~~~~~~~~~~~v~ha~l~~~~~~~m~~d~~-~~----~~---~~-   73 (139)
T 1tsj_A            3 IPKITTFLMFNNQAEEAVKLYTSLFEDSEIITMAKYGENGPGDPGTVQHSIFTLNGQVFMAIDAN-SG----TE---LP-   73 (139)
T ss_dssp             CCSEEEEEECSSCHHHHHHHHHHHSSSCEEEEEEECC-----CTTSEEEEEEEETTEEEEEEC---------------C-
T ss_pred             CCceeEEEEECCCHHHHHHHHHHHcCCCEEEEEEecCcCCCCCCCcEEEEEEEECCEEEEEECCC-CC----CC---ce-
Confidence            3455656566679999999999999 99987432111      1223345567777765554321 11    11   11 


Q ss_pred             eEEEEEECC---HHHHHHHHHHCCCeEEee----CCCceEEEEEcCCCCeEEEEee
Q 029285          146 RHTCIAIRD---VSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  194 (196)
Q Consensus       146 ~hi~f~v~d---l~~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdG~~iEl~e~  194 (196)
                      ..+++.|+|   +++++++|. .|.++..+    ++|.+..+|+||+|+.|+|...
T Consensus        74 ~sl~~~~~d~~evd~~~~~l~-~G~~v~~p~~~~~wG~~~g~v~Dp~G~~W~i~~~  128 (139)
T 1tsj_A           74 ISLFVTVKDTIEMERLFNGLK-DEGAILMPKTNMPPYREFAWVQDKFGVSFQLALP  128 (139)
T ss_dssp             CCEEEECSSHHHHHHHHHHHH-TTCEEEEEEEEETTEEEEEEEECTTSCEEEEEEC
T ss_pred             EEEEEECCCHHHHHHHHHHHh-CCCEEeecccccCCCceEEEEECCCCCEEEEeec
Confidence            468899987   778899998 68887654    4788999999999999999874

>1cjx_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase, iron; 2.40A {Pseudomonas fluorescens} SCOP: d.32.1.3 d.32.1.3

Probab=99.34  E-value=9.9e-13  Score=110.90  Aligned_cols=122  Identities=12%  Similarity=0.046  Sum_probs=88.2

Q ss_pred             CCceeceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEE
Q 029285           69 IDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHT  148 (196)
Q Consensus        69 ~~~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~p~~~~~~~hi  148 (196)
                      ++|.+.+++||.+.|.|++++.+|| +.|||+++.+....    ....+..++..+.+...+..........++.+..|+
T Consensus         6 ~~~~i~~l~hV~~~V~D~~~~~~fy-~~LGf~~~~~~~~~----~~~l~~~g~~~l~l~~~~~~~~~~~~~~~g~gv~~i   80 (357)
T 1cjx_A            6 NPMGLMGFEFIEFASPTPGTLEPIF-EIMGFTKVATHRSK----NVHLYRQGEINLILNNEPNSIASYFAAEHGPSVCGM   80 (357)
T ss_dssp             CTTCEEEEEEEEEECSSTTSSHHHH-HHTTCEEEEEESSS----SEEEEEETTEEEEEECCSSSHHHHHHHHHSSEEEEE
T ss_pred             CCcccceEEEEEEEeCCHHHHHHHH-HHCCCEEEEEeCCe----eEEEEecCCEEEEEECCCCchhhhhhhhcCCeEEEE
Confidence            5788999999999999999999999 78999998754321    234456677666665422110000001245688999


Q ss_pred             EEEECCHHHHHHHHHHCCCeEEeeCCC---ceEEEEEcCCCCeEEEEeec
Q 029285          149 CIAIRDVSKLKMILDKAGISYTLSKSG---RPAIFTRDPDANALEFTQVD  195 (196)
Q Consensus       149 ~f~v~dl~~~~~~l~~~G~~~~~~~~g---~~~~~~~DPdG~~iEl~e~~  195 (196)
                      +|.|+|+++++++++++|+++...+.+   .....+++|+|..++|++..
T Consensus        81 af~V~D~~~~~~~l~~~G~~~~~~~~~~g~~~~~~~~~~gg~~~~~vd~~  130 (357)
T 1cjx_A           81 AFRVKDSQKAYNRALELGAQPIHIDTGPMELNLPAIKGIGGAPLYLIDRF  130 (357)
T ss_dssp             EEEESCHHHHHHHHHHTTCCBCCCCCCTTCBCCCEEECGGGCEEEEECCC
T ss_pred             EEEeCCHHHHHHHHHHcCCEEeecCCCCCcEEEEeeeCCCCeEEEEECCC
Confidence            999999999999999999988655432   24567788888888887653

>3isq_A 4-hydroxyphenylpyruvate dioxygenase; tyrosine metabolism, DIS mutation, iron, mental retardation, metal-binding, oxidored phenylalanine catabolism; 1.75A {Homo sapiens} PDB: 1sqi_A*

Probab=99.33  E-value=6.8e-12  Score=107.26  Aligned_cols=126  Identities=14%  Similarity=0.114  Sum_probs=95.2

Q ss_pred             CCceeceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCC--CceeEEEEeCCeEEEEEecCCCCC-CCC--CCCCCC
Q 029285           69 IDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKL--PYRGAWLWVGAEMIHLMELPNPDP-LSG--RPEHGG  143 (196)
Q Consensus        69 ~~~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~--~~~~~~l~~g~~~l~l~~~~~~~~-~~~--~p~~~~  143 (196)
                      ..+.+++++||+|.|.|++++++||+++|||+.....+.+..  ......+..|+..+.|..+..+.. ...  ...++.
T Consensus         5 ~~~~i~~i~Hv~i~V~d~~~a~~fY~~~LGf~~v~~~~~e~g~r~~~~~~l~~G~i~~~L~~p~~p~s~~~a~fl~~hG~   84 (393)
T 3isq_A            5 ERGRFLHFHSVTFWVGNAKQAASFYCSKMGFEPLAYRGLETGSREVVSHVIKQGKIVFVLSSALNPWNKEMGDHLVKHGD   84 (393)
T ss_dssp             SSCEEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEEESSTTCHHHHHHHHHHCS
T ss_pred             CCCCCceEeEEEEEECCHHHHHHHHHHhcCCEEEEEEcCCCCcEEEEEEEEecCCEEEEEecCCCCCchHHHHHHHhcCC
Confidence            356789999999999999999999999999999875442211  122456777888888887543321 111  012466


Q ss_pred             CceEEEEEECCHHHHHHHHHHCCCeEEeeC----C--C-ceEEEEEcCCCCeEEEEee
Q 029285          144 RDRHTCIAIRDVSKLKMILDKAGISYTLSK----S--G-RPAIFTRDPDANALEFTQV  194 (196)
Q Consensus       144 ~~~hi~f~v~dl~~~~~~l~~~G~~~~~~~----~--g-~~~~~~~DPdG~~iEl~e~  194 (196)
                      +.+|++|.|+|++++++++.++|+++..++    +  | .....+++|.|..+.|++.
T Consensus        85 Gv~~iAf~VdDvdaa~~ra~a~Ga~~v~eP~~~~~~~G~v~~a~I~~~Gd~~h~lVdr  142 (393)
T 3isq_A           85 GVKDIAFEVEDCDYIVQKARERGAKIMREPWVEQDKFGKVKFAVLQTYGDTTHTLVEK  142 (393)
T ss_dssp             EEEEEEEEEECHHHHHHHHHHHTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEE
T ss_pred             cEEEEEEEeCCHHHHHHHHHHCCCeEecCccccccCCceeEEEEEEeCCCcEEEEecc
Confidence            889999999999999999999999986554    2  2 3567789999999998874

>3l20_A Putative uncharacterized protein; hypothetical protein, unknown function; 2.45A {Staphylococcus aureus}

Probab=99.29  E-value=2.6e-10  Score=86.90  Aligned_cols=113  Identities=13%  Similarity=0.003  Sum_probs=80.3

Q ss_pred             eEEEEEcCCHHHHHHHHHhccCCEEeeecCCCC--------------CCceeEEEEeCCeEEEEEecCCCCCCCCCCCCC
Q 029285           77 HHVGILCENLERSLEFYQNILGLEINEARPHDK--------------LPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHG  142 (196)
Q Consensus        77 ~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~--------------~~~~~~~l~~g~~~l~l~~~~~~~~~~~~p~~~  142 (196)
                      -...|.++|.++|++||+++||+++.......+              ...-.+.|.+++..+.+......     .+..+
T Consensus        27 i~PyL~f~~a~eAi~FY~~vFG~~~~~~~~~~d~p~~~~~~~~~~~~g~v~hael~i~g~~lm~~D~~g~-----~~~~~  101 (172)
T 3l20_A           27 LFPYIAFENSKEALAYYEEVFGATDVKRLEVGEEQASHFGMTKEEAQEATMHAEFEVLGVKVLCSDSFGR-----ADKIN  101 (172)
T ss_dssp             EEEEEEESCHHHHHHHHHHHSCCEEEEEEECCTTTTTTTTCCHHHHHTCEEEEEEEETTEEEEEEECTTC-----CCCCC
T ss_pred             EEEEEEECCHHHHHHHHHHHcCCEEEEEEEcccCCcccccCCcccCCCcEEEEEEEECCEEEEEECCCCC-----CCCCC
Confidence            345666779999999999999999875433211              22345678888888877763211     11112


Q ss_pred             CCceEEEEEE--------CCHHHHHHHHHHCC-CeEEee----CCCceEEEEEcCCCCeEEEEeec
Q 029285          143 GRDRHTCIAI--------RDVSKLKMILDKAG-ISYTLS----KSGRPAIFTRDPDANALEFTQVD  195 (196)
Q Consensus       143 ~~~~hi~f~v--------~dl~~~~~~l~~~G-~~~~~~----~~g~~~~~~~DPdG~~iEl~e~~  195 (196)
                       ....+++.+        +|+++++++|.+.| +++..+    ++|.+..+|+||+|+.|+|...+
T Consensus       102 -~~~sl~l~~~~~d~~~~~dvd~~~~~l~~~G~a~v~~p~~~~~wG~r~g~v~DpfG~~W~i~~~~  166 (172)
T 3l20_A          102 -NGISLLIDYDVNNKEDADKVEAFYEQIKDHSSIEIELPFADQFWGGKMGVFTDKYGVRWMLHGQD  166 (172)
T ss_dssp             -SSEEEEEEEETTCHHHHHHHHHHHHHHTTCTTCEEEEEEEECTTSSEEEEEECTTSCEEEEEEEC
T ss_pred             -CcEEEEEEEccCccCcHHHHHHHHHHHHhCCCceEecCccccCCCcEEEEEECCCCCEEEEEeCC
Confidence             224567777        58899999999999 677554    46788999999999999997643

>1sqd_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.3 d.32.1.3 PDB: 1tfz_A* 1tg5_A* 1sp9_A

Probab=99.25  E-value=1.7e-11  Score=105.89  Aligned_cols=126  Identities=16%  Similarity=0.180  Sum_probs=88.4

Q ss_pred             CCceeceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCC-----CCceeEEEEeC--CeEEEEEecCC---CCCCCCC
Q 029285           69 IDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDK-----LPYRGAWLWVG--AEMIHLMELPN---PDPLSGR  138 (196)
Q Consensus        69 ~~~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~-----~~~~~~~l~~g--~~~l~l~~~~~---~~~~~~~  138 (196)
                      .+..+.+++||++.|.|++++++||+++|||++....+.++     ......|+..+  ...+.|.+...   .......
T Consensus       196 ~~~~~~~idHv~i~V~dl~~a~~FY~~~LGf~~~~~~~~~d~~~~~~gl~s~~l~~~~g~~~l~l~e~~~~~~~~s~i~~  275 (424)
T 1sqd_A          196 LDYGIRRLDHAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLASNDEMVLLPINEPVHGTKRKSQIQT  275 (424)
T ss_dssp             CCSSEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEC--------CCEEEEEEECTTSCSEEEEEEECCC---CCHHHH
T ss_pred             CcCCcceEeeEEEeeCCHHHHHHHHHHhhCCeEEEEEcccccccccccceEEEEEcCCCcEEEEEecccccCCCcchhhh
Confidence            45567899999999999999999999999999987654322     23345566643  45788877642   1111101


Q ss_pred             C---CCCCCceEEEEEECCHHHHHHHHHH----CCCeEEeeCCC------------------------ceEEEEEcCCCC
Q 029285          139 P---EHGGRDRHTCIAIRDVSKLKMILDK----AGISYTLSKSG------------------------RPAIFTRDPDAN  187 (196)
Q Consensus       139 p---~~~~~~~hi~f~v~dl~~~~~~l~~----~G~~~~~~~~g------------------------~~~~~~~DPdG~  187 (196)
                      .   ..+.|++||||.|+|+.+++++|++    +|+++...++.                        ...++=+|.+|+
T Consensus       276 fl~~~~G~G~~HIAf~vdDI~~a~~~L~~r~~~~Gv~~l~~pp~~YY~~l~~r~~~~~~~~~~~~l~~~~IL~D~d~~g~  355 (424)
T 1sqd_A          276 YLEHNEGAGLQHLALMSEDIFRTLREMRKRSSIGGFDFMPSPPPTYYQNLKKRVGDVLSDDQIKECEELGILVDRDDQGT  355 (424)
T ss_dssp             HHHHHTSCEEEEEEEEESCHHHHHHHHHHHGGGTSCCBCCCCCHHHHHHHHHHHTTTSCHHHHHHHHHHTCEEEECSSEE
T ss_pred             hhhhcCCCCcCEEEEEeCCHHHHHHHHHhhhccCCcEEecCCCcchhHHHHHhhccccchhhHHHHHHcCeEEecCCCCe
Confidence            0   1456899999999999999999999    89988765311                        123556777788


Q ss_pred             eEEEEee
Q 029285          188 ALEFTQV  194 (196)
Q Consensus       188 ~iEl~e~  194 (196)
                      .++|++.
T Consensus       356 llqift~  362 (424)
T 1sqd_A          356 LLQIFTK  362 (424)
T ss_dssp             EEEEEBC
T ss_pred             EEEEEcc
Confidence            8777753

>1sp8_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 2.00A {Zea mays} SCOP: d.32.1.3 d.32.1.3

Probab=99.23  E-value=5.3e-11  Score=102.55  Aligned_cols=105  Identities=14%  Similarity=0.153  Sum_probs=76.3

Q ss_pred             CCceeceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCC-----CCceeEEEEeC--CeEEEEEecCCC---CCCCCC
Q 029285           69 IDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDK-----LPYRGAWLWVG--AEMIHLMELPNP---DPLSGR  138 (196)
Q Consensus        69 ~~~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~-----~~~~~~~l~~g--~~~l~l~~~~~~---~~~~~~  138 (196)
                      .+..+.+++||++.|.|++++++||+++|||++....+.++     ......|+..+  ...+.|.+....   ......
T Consensus       193 ~~~~~~~idHv~i~V~dl~~a~~FY~~vLGf~~~~~~~~~d~~~~~~gl~s~~l~~~~g~i~l~l~e~~~~~~~~s~i~~  272 (418)
T 1sp8_A          193 ADYGLSRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSENVLLPLNEPVHGTKRRSQIQT  272 (418)
T ss_dssp             CCCSEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEC--------CEEEEEEECSSSCCEEEEEEECCCSSSCCHHHH
T ss_pred             CCCCcceEeeEEEecCCHHHHHHHHHHHcCCEEEEEecccccccccccceEEEEEcCCCcEEEEEeecccccCCCcchhh
Confidence            44567899999999999999999999999999987653222     13355677654  457777766421   111000


Q ss_pred             C---CCCCCceEEEEEECCHHHHHHHHHH----CCCeEEeeC
Q 029285          139 P---EHGGRDRHTCIAIRDVSKLKMILDK----AGISYTLSK  173 (196)
Q Consensus       139 p---~~~~~~~hi~f~v~dl~~~~~~l~~----~G~~~~~~~  173 (196)
                      .   ..+.+++||||.|+|+.+++++|++    +|+++...|
T Consensus       273 fl~~~~G~G~~HIAf~vdDI~~a~~~L~~r~~~~Gv~~l~~P  314 (418)
T 1sp8_A          273 FLDHHGGPGVQHMALASDDVLRTLREMQARSAMGGFEFMAPP  314 (418)
T ss_dssp             HHHHHTSSEEEEEEEEETTHHHHHHHHHTSGGGTSCCBCCCC
T ss_pred             hhhccCCCCcCEEEEEeCCHHHHHHHHhhhhccCCeEEccCC
Confidence            0   1356899999999999999999999    799987653

>3oms_A PHNB protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, methyltransferase, GL family; 1.90A {Bacillus cereus} SCOP: d.32.1.0

Probab=99.17  E-value=1.3e-09  Score=80.03  Aligned_cols=109  Identities=9%  Similarity=0.035  Sum_probs=76.5

Q ss_pred             EEEEcC-CHHHHHHHHHhccC-CEEeee--cC----CCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEE
Q 029285           79 VGILCE-NLERSLEFYQNILG-LEINEA--RP----HDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI  150 (196)
Q Consensus        79 v~l~v~-Dl~~a~~FY~~vLG-~~~~~~--~~----~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~p~~~~~~~hi~f  150 (196)
                      ..|.++ |.++|++||+++|| .++...  .+    ........+.+.+++..+.+........    ... +....+++
T Consensus        13 P~L~f~g~a~eA~~FY~~vFg~~~i~~~~~~~~~~~~~~g~v~ha~l~i~g~~lm~~d~~~~~~----~~~-~~~~~l~l   87 (138)
T 3oms_A           13 TFLMFEGKAEEAMNFYTSLFDQSEIVSISRYDENGPGKEGTVIHATFTLNGQEFMCIDSYVNHN----FTF-TPAMSLYV   87 (138)
T ss_dssp             EEEEESSCHHHHHHHHHTTSTTCCEEEEEECCTTCSSCTTSEEEEEEEETTEEEEEEECSSCCS----CCC-CTTSCEEE
T ss_pred             EEEEECCCHHHHHHHHHHHcCCceEEEEEecCCCCCCCCCcEEEEEEEECCEEEEEEcCCCCCC----CCC-CCCEEEEE
Confidence            456667 89999999999999 566432  21    1223344677888998887775322111    111 12246999


Q ss_pred             EECC---HHHHHHHHHHCCCeEEee----CCCceEEEEEcCCCCeEEEEe
Q 029285          151 AIRD---VSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQ  193 (196)
Q Consensus       151 ~v~d---l~~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdG~~iEl~e  193 (196)
                      .|+|   +++++++|. .|.++..+    ++|.+..+++||+|+.|.|..
T Consensus        88 ~~~d~~evd~~~~~l~-~Gg~v~~p~~~~~wg~~~~~~~Dp~G~~W~i~~  136 (138)
T 3oms_A           88 TCETEEEIDTVFHKLA-QDGAILMPLGSYPFSKKFGWLNDKYGVSWQLTL  136 (138)
T ss_dssp             EESSHHHHHHHHHHHH-TTCEEEEEEEEETTEEEEEEEECTTSCEEEEEE
T ss_pred             EcCCHHHHHHHHHHHH-cCCeEecCcccccCCcEEEEEECCCCCEEEEEe
Confidence            9999   999999996 57777544    467789999999999999975

>3e0r_A C3-degrading proteinase (CPPA protein); MCSG, PSI, SAD, structural GE protein structure initiative; 2.30A {Streptococcus pneumoniae}

Probab=99.12  E-value=2e-09  Score=85.64  Aligned_cols=108  Identities=15%  Similarity=0.081  Sum_probs=74.8

Q ss_pred             eeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCe--EEEEEecCCCCCCCCCCCCCCCceEE---EE
Q 029285           76 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHT---CI  150 (196)
Q Consensus        76 l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~--~l~l~~~~~~~~~~~~p~~~~~~~hi---~f  150 (196)
                      .-+..|+|+|++++++||+++|||++..+..      ..+++..++.  .+.|-+.+....     ....|..|+   ++
T Consensus        11 ~~~p~LrV~nr~~~~~FY~~vlG~kll~ee~------~~a~lg~~~~~~~L~lEEsp~~~~-----~~~~Glkh~a~i~i   79 (244)
T 3e0r_A           11 RIIPTLKANNRKLNETFYIETLGMKALLEES------AFLSLGDQTGLEKLVLEEAPSMRT-----RKVEGRKKLARLIV   79 (244)
T ss_dssp             EEEEEEEESSHHHHHHHHTTTTCCEEEEECS------SEEEEECTTCCEEEEEEECCTTTC-----BCCCSSCSEEEEEE
T ss_pred             EEeeEEEECCHHHHHHHHHhccCcEEeeccC------cEEEeecCCCcceEEEEeCCCccc-----ccccccceeeeEEE
Confidence            4678999999999999999999999887543      2466666543  333334232211     112355566   69


Q ss_pred             EECCHHHHHHHHHHCCCeEE--eeCCCceEEEEEcCCCCeEEEEeec
Q 029285          151 AIRDVSKLKMILDKAGISYT--LSKSGRPAIFTRDPDANALEFTQVD  195 (196)
Q Consensus       151 ~v~dl~~~~~~l~~~G~~~~--~~~~g~~~~~~~DPdG~~iEl~e~~  195 (196)
                      .|++-.++-+-|.. +..+.  ...+.++++|+.|||||.|||+..+
T Consensus        80 ~vp~~~el~~lL~~-~~~~~~~~~gdhgyA~yl~dPEGn~ieiyae~  125 (244)
T 3e0r_A           80 KVENPLEIEGILSK-TDSIHRLYKGQNGYAFEIFSPEDDLILIHAED  125 (244)
T ss_dssp             EESSHHHHHHHHTT-CSCCSEEEECSSSEEEEEECTTCCEEEEECCS
T ss_pred             EcCCHHHHHHHHhc-ccccccccccCCcEEEEEECCCCCeEEEEEcC
Confidence            99988887666555 55442  3344567899999999999998754

>3isq_A 4-hydroxyphenylpyruvate dioxygenase; tyrosine metabolism, DIS mutation, iron, mental retardation, metal-binding, oxidored phenylalanine catabolism; 1.75A {Homo sapiens} PDB: 1sqi_A*

Probab=99.09  E-value=2.5e-10  Score=97.57  Aligned_cols=104  Identities=12%  Similarity=0.056  Sum_probs=75.1

Q ss_pred             CCceeceeeEEEEEcCC--HHHHHHHHHhccCCEEeeecCCCC-----CCceeEEEEeC--CeEEEEEecCCCCCCC--C
Q 029285           69 IDYGVVSVHHVGILCEN--LERSLEFYQNILGLEINEARPHDK-----LPYRGAWLWVG--AEMIHLMELPNPDPLS--G  137 (196)
Q Consensus        69 ~~~~i~~l~hv~l~v~D--l~~a~~FY~~vLG~~~~~~~~~~~-----~~~~~~~l~~g--~~~l~l~~~~~~~~~~--~  137 (196)
                      .+..+.+++||++.|+|  ++++++||+++|||+.....+.+.     ...+...+..+  ...++|.+........  .
T Consensus       167 ~~~~l~~IDHv~i~V~~~~l~~a~~fY~~~lGf~~~~~~d~~~i~~~~~gl~s~~~~~~~g~v~i~L~ep~~~~~~s~I~  246 (393)
T 3isq_A          167 PKCSLEMIDHIVGNQPDQEMVSASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESIKMPINEPAPGKKKSQIQ  246 (393)
T ss_dssp             CCCCEEEEEEEEEECCTTCHHHHHHHHHHHHCCEEEEEECTTTSBCSSCEEEEEEEECTTSSCEEEEEEEECCSBCCHHH
T ss_pred             CCCCeeEEeEEEEecCccHHHHHHHHHHHHhCCEEeccccccccccCCCcEEEEEEECCCCCEEEEEecCCCCCCCCHHH
Confidence            34568899999999998  999999999999999876543211     22333445443  3588888765321111  0


Q ss_pred             C---CCCCCCceEEEEEECCHHHHHHHHHHCCCeEEee
Q 029285          138 R---PEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLS  172 (196)
Q Consensus       138 ~---p~~~~~~~hi~f~v~dl~~~~~~l~~~G~~~~~~  172 (196)
                      .   ...|.|++||||.|+|+.+++++|+++|+++...
T Consensus       247 ~fL~~~~G~Gi~HiA~~~dDi~~~~~~l~~~Gv~~l~~  284 (393)
T 3isq_A          247 EYVDYNGGAGVQHIALKTEDIITAIRHLRERGLEFLSV  284 (393)
T ss_dssp             HHHHHHTSSEEEEEEEEESCHHHHHHHHHHTTCCBCCC
T ss_pred             HHHHHcCCCCcceEEEEcCCHHHHHHHHHHcCCccCCC
Confidence            0   1136789999999999999999999999988643

>1u69_A Hypothetical protein; structural genomics, MSCG, pseudomonas aeruginosa PAO1, HYPO protein, protein structure initiative (PSI); 1.60A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=98.40  E-value=1.4e-05  Score=60.07  Aligned_cols=102  Identities=12%  Similarity=0.025  Sum_probs=70.5

Q ss_pred             EEEEcC-CHHHHHHHHHhcc-CCEEee--ecCC-----CCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEE
Q 029285           79 VGILCE-NLERSLEFYQNIL-GLEINE--ARPH-----DKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTC  149 (196)
Q Consensus        79 v~l~v~-Dl~~a~~FY~~vL-G~~~~~--~~~~-----~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~p~~~~~~~hi~  149 (196)
                      ..|.++ |.+++++||+++| |.++..  +.+.     ++...-++-+.+++..+.+.... +    ..+. ..+ ..++
T Consensus         9 PyL~f~g~a~eAi~FY~~vF~ga~i~~~~~~~~~~~~~~~g~Vmhael~i~g~~~m~~d~~-p----~~~~-~~~-~sl~   81 (163)
T 1u69_A            9 ICLWYDSAALEAATFYAETFPDSAVLAVHRAPGDYPSGKEGDVLTVEFRVMGIPCLGLNGG-P----AFRH-SEA-FSFQ   81 (163)
T ss_dssp             EEEEESSCHHHHHHHHHHHSTTEEEEEEEECSSCBTTBCTTSEEEEEEEETTEEEEEEECC-T----TCCC-CTT-EEEE
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCEEeEEEeccCCCCCCCCCeEEEEEEEECCEEEEEECCC-C----CcCC-CCc-eEEE
Confidence            345666 9999999999999 998874  2211     12234457788888877776431 1    1111 122 3788


Q ss_pred             EEECC---HHHHHHHHHHCCCeEEeeCCCceEEEEEcCCCCeEEEEe
Q 029285          150 IAIRD---VSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQ  193 (196)
Q Consensus       150 f~v~d---l~~~~~~l~~~G~~~~~~~~g~~~~~~~DPdG~~iEl~e  193 (196)
                      +.++|   +++++++|.+.|.++.  ..    -.++||.|+.|.|..
T Consensus        82 v~~~d~~e~d~~~~~L~~~Gg~v~--~~----G~v~D~fGv~W~i~~  122 (163)
T 1u69_A           82 VATDDQAETDRLWNAIVDNGGEES--AC----GWCRDKWGISWQITP  122 (163)
T ss_dssp             EEESSHHHHHHHHHHHHHTTCEEC--ST----TEEECTTSCEEEEEE
T ss_pred             EEeCCHHHHHHHHHHHHhCCCEEE--EE----EEEECCCCCEEEEEe
Confidence            88887   6677889987788776  22    479999999999875

>3p8a_A Uncharacterized protein; mainly antiparallel beta sheets, alpha and beta protein, UNK function; HET: MSE BTB PG4; 1.95A {Staphylococcus aureus}

Probab=98.09  E-value=4.2e-06  Score=68.02  Aligned_cols=91  Identities=12%  Similarity=0.223  Sum_probs=68.2

Q ss_pred             eceeeEEEEEcCCHHHHHHHHHhccC-----CEEeeecCCCCCCceeEEEEeCCeEEEEEecCCCCC--------CC--C
Q 029285           73 VVSVHHVGILCENLERSLEFYQNILG-----LEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP--------LS--G  137 (196)
Q Consensus        73 i~~l~hv~l~v~Dl~~a~~FY~~vLG-----~~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~--------~~--~  137 (196)
                      ..+++|+.+.|++++        .||     |.+.........+..++.+.+++..|||+...+...        ..  .
T Consensus        22 ~~~lDHlVi~v~~l~--------~lG~~~~~f~~~~GG~H~~~GT~N~Li~fdg~YLElIai~~~~~~~~~~~~~~~~~~   93 (274)
T 3p8a_A           22 ILKFDHIIHYIDQLD--------RFSFPGDVIKLHSGGYHHKYGTFNKLGYINENYIELLDVENNEKLKKMAKTIEGGVA   93 (274)
T ss_dssp             CCEEEEEEEECTTGG--------GCCCGGGSSCCEEEEEETTTTEEEEEEECSSSEEEEEEESCHHHHHHHTTSTGGGTC
T ss_pred             cccCCEEEEEeccHH--------HcCCccceEEeCCCccCCCCCCEEEEEeeCCEEEEEEeecCcccccccccccCccch
Confidence            578999999999884        467     887765544455666777777889999998765310        00  0


Q ss_pred             C------CCCCCCceEEEEEECCHHHHHHHHHHCCCeEEe
Q 029285          138 R------PEHGGRDRHTCIAIRDVSKLKMILDKAGISYTL  171 (196)
Q Consensus       138 ~------p~~~~~~~hi~f~v~dl~~~~~~l~~~G~~~~~  171 (196)
                      .      ...+.++.++++.++|+++..+++.++|+.+..
T Consensus        94 f~~~~~~~~~geGl~~~alrt~Di~a~~a~l~~~Gl~~~~  133 (274)
T 3p8a_A           94 FATQIVQEKYEQGFKNICLHTNDIEAVKNKLQSEQVEVVG  133 (274)
T ss_dssp             TTTHHHHTTTCCEEEEEEEECSCHHHHHHHHHTTTCEEEE
T ss_pred             HHHHhhhhccCCCeEEEEEecCCHHHHHHHHHHcCCCcCC
Confidence            0      234678999999999999999999999997754

>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}

Probab=97.98  E-value=1.7e-05  Score=73.65  Aligned_cols=120  Identities=19%  Similarity=0.251  Sum_probs=75.5

Q ss_pred             eceeeEEEEEc---CCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCC--eEEEEEec-CCCC----------CCC
Q 029285           73 VVSVHHVGILC---ENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA--EMIHLMEL-PNPD----------PLS  136 (196)
Q Consensus        73 i~~l~hv~l~v---~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~--~~l~l~~~-~~~~----------~~~  136 (196)
                      +.+...+.++.   .-++++++||+++|++.......   .....+++...+  ..+++... .+..          ...
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (941)
T 3opy_B            7 FNGTSFITLFAPNISLLQASIDFYTNFLGFAIRKNSN---QKLFWLQLEEDQNNVSIQLILDPEHAASVSQIDQNIRNLT   83 (941)
T ss_dssp             SCEEEEEEEECCC-CC-HHHHHHHHHTTCCEECSSCS---CCC---EECCTTSCCEEEEECSSCSCHHHHHHHHHHHCCC
T ss_pred             ecceeEEEEEeCCHHHHHHHHHHHHhhccceeccccC---CcceeEEEecCCCeEEEEEEeccccchhHHHHHHHHhhhh
Confidence            34555666664   46899999999999998765322   111234453332  35555433 1110          000


Q ss_pred             C---CCCCCCCceEEEEEECCHHHHHHHHHHCCCeEEeeCC--CceEEEEEcCCCCeEEEEeec
Q 029285          137 G---RPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKS--GRPAIFTRDPDANALEFTQVD  195 (196)
Q Consensus       137 ~---~p~~~~~~~hi~f~v~dl~~~~~~l~~~G~~~~~~~~--g~~~~~~~DPdG~~iEl~e~~  195 (196)
                      .   .-..-+...|+.|.+.|++++.+.|.+.+.++...|.  +...+|+.||+||.|+|.+..
T Consensus        84 ~~~~~~dW~~~~~~l~f~~~dL~~~~~~L~~~~~~~Q~~ps~~~~~e~yt~DPlGNvIgfs~~~  147 (941)
T 3opy_B           84 RSLYRKDWRSIQSNIAFKSSSLSKLVKLLKDGGHPVQQSPNEISPFEVYTVDPLGSLIGFSGFK  147 (941)
T ss_dssp             ----------CCCEEEEEESCHHHHHHHHHTTTCCCBCSSSSCSCEEECCSSCCEEEECC-CCS
T ss_pred             cccccccccccCceEEEEeCCHHHHHHHHHhcCCccccCCCcCCCceEEeECCCCCEEEEeccC
Confidence            0   0111123349999999999999999999998877776  678899999999999998753

>3e0r_A C3-degrading proteinase (CPPA protein); MCSG, PSI, SAD, structural GE protein structure initiative; 2.30A {Streptococcus pneumoniae}

Probab=96.98  E-value=0.001  Score=52.77  Aligned_cols=94  Identities=9%  Similarity=0.081  Sum_probs=63.0

Q ss_pred             ceeceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEE
Q 029285           71 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI  150 (196)
Q Consensus        71 ~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~p~~~~~~~hi~f  150 (196)
                      +.--.+ ||.|.|.|++++  ||++ +|+                     +..+.+++...++-+ ..+...-++-.+.|
T Consensus       148 Ls~fti-~I~LnV~d~~~s--Fy~~-~~~---------------------~~~~~F~~a~G~dl~-~~~~~t~gLe~l~~  201 (244)
T 3e0r_A          148 LSKFEI-SMELHLPTDIES--FLES-SEI---------------------GASLDFIPAQGQDLT-VDNTVTWDLSMLKF  201 (244)
T ss_dssp             CSSEEE-EEEEEECTTCCC--SCCH-HHH---------------------TTTEEEEECCCTTTT-CCTTSBSSEEEEEE
T ss_pred             CCCcEE-EEEEEcCchHHH--Hhhc-cCC---------------------cccEEEEcccCCCCC-CCCCCccCceEEEE
Confidence            333446 999999999998  9986 433                     112334443333222 22334446778888


Q ss_pred             EEC--CHHHHHHHHHHCCCeEEeeCCCceEEEEEcCCCCeEEEEe
Q 029285          151 AIR--DVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQ  193 (196)
Q Consensus       151 ~v~--dl~~~~~~l~~~G~~~~~~~~g~~~~~~~DPdG~~iEl~e  193 (196)
                      .|+  |+.++.++|+++|.-+   ......+.+.||.|+.|-|.+
T Consensus       202 ~v~~~dl~~l~~~L~~~g~~i---dkk~~~l~~~DpsgIeiwF~~  243 (244)
T 3e0r_A          202 LVNELDIASLRQKFESTEYFI---PKSEKFFLGKDRNNVELWFEE  243 (244)
T ss_dssp             EESSCCHHHHHHHTTTSCEEC---CTTCCEEEEECTTSCEEEEEE
T ss_pred             EeCHHHHHHHHHHHHhCCceE---cccCCEEEEECCCCCEEEEEE
Confidence            887  7889999999987622   223567899999999998875

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A*

Probab=96.34  E-value=0.019  Score=45.64  Aligned_cols=35  Identities=11%  Similarity=0.174  Sum_probs=31.1

Q ss_pred             CceeceeeEEEEEcCCHHHHHHHHHhccCCEEeeec
Q 029285           70 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEAR  105 (196)
Q Consensus        70 ~~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~  105 (196)
                      +..+.+++||+|.|.|++++.+|| ++|||+...+.
T Consensus       153 ~~~i~glghV~L~v~d~~~~~~fl-~~LG~~~~~~~  187 (252)
T 3pkv_A          153 ADQLLSIGEINITTSDVEQAATRL-KQAELPVKLDQ  187 (252)
T ss_dssp             GGGCCEEEEEEEECSCHHHHHHHH-HHTTCCCCGGG
T ss_pred             HHHCcEeeeEEEEeCCHHHHHHHH-HHcCCCcccCC
Confidence            345789999999999999999999 99999988653

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans}

Probab=93.61  E-value=0.076  Score=38.41  Aligned_cols=59  Identities=15%  Similarity=0.239  Sum_probs=42.7

Q ss_pred             ceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCC-CCCCceeEEE---EeCCeEEEEEecCCCC
Q 029285           74 VSVHHVGILCENLERSLEFYQNILGLEINEARPH-DKLPYRGAWL---WVGAEMIHLMELPNPD  133 (196)
Q Consensus        74 ~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~-~~~~~~~~~l---~~g~~~l~l~~~~~~~  133 (196)
                      .++.|+++.|.|++++.+-..+ .|.++....+. ...+.+.+|+   ..+|..++|++.....
T Consensus        78 ~g~~Hiaf~V~Did~~~~~l~~-~G~~~~~~~~~~~~~g~~~~f~~~~DPdG~~iEl~~~~~~~  140 (161)
T 3oa4_A           78 EGIHHIAIGVKSIEERIQEVKE-NGVQMINDEPVPGARGAQVAFLHPRSARGVLYEFCEKKEQA  140 (161)
T ss_dssp             SEEEEEEEECSCHHHHHHHHHH-TTCCBSCSSCEECGGGCEEEEBCGGGTTTCCEEEEECCCCC
T ss_pred             CCeEEEEEEECCHHHHHHHHHH-CCCEecccCcccCCCCcEEEEEeccCCCeEEEEEEecCCcc
Confidence            4789999999999999999988 89987654221 1112345666   3457899999876554

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2

Probab=92.25  E-value=0.7  Score=30.56  Aligned_cols=50  Identities=20%  Similarity=0.294  Sum_probs=38.3

Q ss_pred             CceEEEEEECCHHHHHHHHHH-CCCeEEeeCCCceEEEEEcCCCCeEEEEee
Q 029285          144 RDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDPDANALEFTQV  194 (196)
Q Consensus       144 ~~~hi~f~v~dl~~~~~~l~~-~G~~~~~~~~g~~~~~~~DPdG~~iEl~e~  194 (196)
                      ++.|+.+.|+|++++.+...+ .|.++..... ....++..++|..+++.+.
T Consensus         3 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~-~~~~~~~~~~~~~l~l~~~   53 (113)
T 1xqa_A            3 GIKHLNLTVADVVAAREFLEKYFGLTCSGTRG-NAFAVMRDNDGFILTLMKG   53 (113)
T ss_dssp             CCCEEEEEESCHHHHHHHHHHHHCCEEEEEET-TTEEEEECTTCCEEEEEEC
T ss_pred             eeEEEEEEeCCHHHHHHHHHHhCCCEEeccCC-CcEEEEEcCCCcEEEEEeC
Confidence            467999999999999998876 8988765432 2446677777888888764

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}

Probab=91.97  E-value=0.86  Score=31.75  Aligned_cols=54  Identities=11%  Similarity=0.164  Sum_probs=41.7

Q ss_pred             CCCceEEEEEECCHHHHHHHHHH-CCCeEEeeC----------CCceEEEEEcCCCCeEEEEeec
Q 029285          142 GGRDRHTCIAIRDVSKLKMILDK-AGISYTLSK----------SGRPAIFTRDPDANALEFTQVD  195 (196)
Q Consensus       142 ~~~~~hi~f~v~dl~~~~~~l~~-~G~~~~~~~----------~g~~~~~~~DPdG~~iEl~e~~  195 (196)
                      -.++.|+++.|.|++++.+...+ .|.++....          ..+..+++.-++|..++|.+.+
T Consensus        17 ~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~   81 (156)
T 3kol_A           17 LRKVHHIALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASGKVANFITPDGTILDLFGEP   81 (156)
T ss_dssp             SCCCCEEEEEESCHHHHHHHHTTTSCCEECCTTTSCTTTHHHHHTTSEEEEECTTSCEEEEEECT
T ss_pred             cceEeEEEEEeCCHHHHHHHHHhhcCCEEEeecccCcchhcccCCCcEEEEEeCCCCEEEEEecC
Confidence            35788999999999999999987 798876521          1234577777888999998753

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis}

Probab=91.43  E-value=0.36  Score=34.43  Aligned_cols=53  Identities=21%  Similarity=0.359  Sum_probs=38.9

Q ss_pred             ceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEe-C--CeEEEEEec
Q 029285           74 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-G--AEMIHLMEL  129 (196)
Q Consensus        74 ~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~-g--~~~l~l~~~  129 (196)
                      .+++|+++.|.|++++.+...+ .|.++....+..  ..+.+|+.. +  |..++|++.
T Consensus       103 ~g~~Hiaf~v~di~~~~~~l~~-~G~~~~~~~~~~--g~~~~~~~dpd~~G~~iEl~e~  158 (159)
T 3gm5_A          103 EGIHHIAFVVKDMDRKVEELYR-KGMKVIQKGDFE--GGRYAYIDTLRALKVMIELLEN  158 (159)
T ss_dssp             SEEEEEEEECSCHHHHHHHHHH-TTCCEEEEEEET--TEEEEEESCHHHHSSEEEEEEE
T ss_pred             ceEEEEEEEcCCHHHHHHHHHH-CCCcEeeccccC--CeeEEEEeccccCcEEEEEEec
Confidence            4789999999999999999998 899887643322  234555543 3  668888764

>3opy_A 6-phosphofructo-1-kinase alpha-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}

Probab=91.07  E-value=2.1  Score=40.23  Aligned_cols=48  Identities=25%  Similarity=0.279  Sum_probs=35.2

Q ss_pred             eEEEEEECCHHHHHHHHHHCCCeEEeeCCCceEEEEEcCCCCeEEEEe
Q 029285          146 RHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQ  193 (196)
Q Consensus       146 ~hi~f~v~dl~~~~~~l~~~G~~~~~~~~g~~~~~~~DPdG~~iEl~e  193 (196)
                      ..+.|.+.|+.++.+.|.+..+...+..-....+|+.||=||.+.|..
T Consensus       125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dp~~~~~~~~~  172 (989)
T 3opy_A          125 GEVTFFTASIDKLKAKLIEIGAEIIPSKIDLVEFSTRDPMGDVISFSS  172 (989)
T ss_dssp             CEEEEECSCHHHHHHHHHHSSCCBCCCC--CCCEEEESSSEEEEECCS
T ss_pred             ceEEEEeCcHHHHHHHhhhcccccCCCCCCceeEEEecCCCCEEeeec
Confidence            468999999999999999873332222222456999999999998754

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans}

Probab=91.05  E-value=0.58  Score=31.55  Aligned_cols=54  Identities=20%  Similarity=0.302  Sum_probs=36.5

Q ss_pred             eceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEe-CCeEEEEE
Q 029285           73 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLM  127 (196)
Q Consensus        73 i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~-g~~~l~l~  127 (196)
                      -.++.|+++.|.|++++.+-..+ .|.++...........+.+++.. +|..++|+
T Consensus        79 ~~g~~~~~~~v~d~~~~~~~l~~-~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~  133 (134)
T 3l7t_A           79 ACGLRHLAFYVEDVEASRQELIA-LGIRVEEVRYDDYTGKKMAFFFDPDGLPLELH  133 (134)
T ss_dssp             CSEEEEEEEECSCHHHHHHHHHH-HTCCCCCCEECTTSCCEEEEEECTTCCEEEEE
T ss_pred             CCCeEEEEEEECCHHHHHHHHHh-CCCcccceeccCCCceEEEEEECCCCCEEEEe
Confidence            45789999999999999999988 88887643222122234455543 35566665

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A

Probab=90.99  E-value=0.79  Score=31.68  Aligned_cols=52  Identities=12%  Similarity=0.040  Sum_probs=40.1

Q ss_pred             CCceEEEEEECCHHHHHHHHHH-CCCeEEeeC----CCceEEEEEcCCC-----CeEEEEee
Q 029285          143 GRDRHTCIAIRDVSKLKMILDK-AGISYTLSK----SGRPAIFTRDPDA-----NALEFTQV  194 (196)
Q Consensus       143 ~~~~hi~f~v~dl~~~~~~l~~-~G~~~~~~~----~g~~~~~~~DPdG-----~~iEl~e~  194 (196)
                      .++.|+.+.|.|++++.+...+ .|.++....    .+...+++..+++     ..++|.+.
T Consensus         8 ~~~~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~l~~~   69 (148)
T 1jc4_A            8 ICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAP   69 (148)
T ss_dssp             SEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEE
T ss_pred             ceeeEEEEEeCCHHHHHHHHHHccCceeeecccCCCCCeEEEEEEcCCCCcCcceEEEEeec
Confidence            3678999999999999998874 898876432    2345677887775     78999875

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6

Probab=90.71  E-value=0.65  Score=32.37  Aligned_cols=51  Identities=12%  Similarity=0.251  Sum_probs=38.7

Q ss_pred             CceEEEEEECCHHHHHHHHHHCCCeEEeeC---------------CCceEEEEEcCCC-CeEEEEee
Q 029285          144 RDRHTCIAIRDVSKLKMILDKAGISYTLSK---------------SGRPAIFTRDPDA-NALEFTQV  194 (196)
Q Consensus       144 ~~~hi~f~v~dl~~~~~~l~~~G~~~~~~~---------------~g~~~~~~~DPdG-~~iEl~e~  194 (196)
                      ++.|+++.|+|++++.+...+.|.++....               .+....++.-++| ..++|.+.
T Consensus        11 ~i~hv~l~v~D~~~a~~FY~~lG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~l~l~~~   77 (153)
T 1ss4_A           11 RMDNVSIVVESLDNAISFFEEIGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHSRIELSRF   77 (153)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTSSCEEEEEEE
T ss_pred             ceeeEEEEeCCHHHHHHHHHHCCCEEEeeccCCcchhheeeCCCCCcEEEEEEECCCCCcEEEEEEe
Confidence            578999999999999988877898875321               2245677777776 78888874

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A

Probab=90.51  E-value=0.94  Score=30.82  Aligned_cols=52  Identities=12%  Similarity=0.116  Sum_probs=38.4

Q ss_pred             CCceEEEEEECCHHHHHHHHHHCCCeEEee----C-CCceEEEEEcCCCCeEEEEeec
Q 029285          143 GRDRHTCIAIRDVSKLKMILDKAGISYTLS----K-SGRPAIFTRDPDANALEFTQVD  195 (196)
Q Consensus       143 ~~~~hi~f~v~dl~~~~~~l~~~G~~~~~~----~-~g~~~~~~~DPdG~~iEl~e~~  195 (196)
                      .++.|+++.|+|++++.+.....|.+....    + .+.+..++.. +|..+|+.+..
T Consensus         6 ~~i~hv~i~v~Dl~~a~~FY~~lG~~~~~~~~~~~~~~~~~~~~~~-~~~~l~l~~~~   62 (133)
T 3hdp_A            6 LKVHHIGYAVKNIDSALKKFKRLGYVEESEVVRDEVRKVYIQFVIN-GGYRVELVAPD   62 (133)
T ss_dssp             CCEEEEEEECSCHHHHHHHHHHTTCEECSCCEEETTTTEEEEEEEE-TTEEEEEEEES
T ss_pred             eeeCEEEEEECCHHHHHHHHHHcCCeeecceeccCCcceEEEEEeC-CCEEEEEEecC
Confidence            367899999999999999888899887432    2 2335555555 57788888753

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}

Probab=90.38  E-value=0.98  Score=30.27  Aligned_cols=52  Identities=15%  Similarity=0.144  Sum_probs=39.6

Q ss_pred             CceEEEEEECCHHHHHHHHH-HCCCeEEee----CCCceEEEEEcCCCCeEEEEeec
Q 029285          144 RDRHTCIAIRDVSKLKMILD-KAGISYTLS----KSGRPAIFTRDPDANALEFTQVD  195 (196)
Q Consensus       144 ~~~hi~f~v~dl~~~~~~l~-~~G~~~~~~----~~g~~~~~~~DPdG~~iEl~e~~  195 (196)
                      .+.|+++.|.|++++.+... -.|.+....    ..+...+++..++|..++|.+.+
T Consensus         3 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~   59 (127)
T 3e5d_A            3 KIEHVALWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSFEDGARLEIMSRT   59 (127)
T ss_dssp             CCCEEEEECSSHHHHHHHHHHHHCCEECCCEEEGGGTEEEEEEECSSSCEEEEEEET
T ss_pred             EEEEEEEEECCHHHHHHHHHHhcCCeeecccccCCCCccEEEEEcCCCcEEEEEecC
Confidence            46799999999999999885 468877543    12346677777779999998764

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium}

Probab=89.99  E-value=1.5  Score=30.55  Aligned_cols=53  Identities=13%  Similarity=0.091  Sum_probs=38.5

Q ss_pred             CCCceEEEEEECCHHHHHHHHHH-CCCeEEeeCCCceEEEE-EcCCCCeEEEEee
Q 029285          142 GGRDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFT-RDPDANALEFTQV  194 (196)
Q Consensus       142 ~~~~~hi~f~v~dl~~~~~~l~~-~G~~~~~~~~g~~~~~~-~DPdG~~iEl~e~  194 (196)
                      -.++.|+++.|.|++++.+...+ .|.++.....+....++ .+..+..++|.+.
T Consensus        26 i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~l~l~~~   80 (141)
T 3ghj_A           26 IKGLFEVAVKVKNLEKSSQFYTEILGFEAGLLDSARRWNFLWVSGRAGMVVLQEE   80 (141)
T ss_dssp             CCCCCEEEEEESCHHHHHHHHHHTSCCEEEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred             eceecEEEEEeCCHHHHHHHHHHhcCCEEEEecCCCcEEEEEecCCCcEEEEecc
Confidence            35688999999999999999965 89988765433333343 3445778888764

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} SCOP: d.32.1.0

Probab=89.70  E-value=1.7  Score=29.12  Aligned_cols=50  Identities=20%  Similarity=0.312  Sum_probs=36.8

Q ss_pred             CceEEEEEECCHHHHHHHHHH-CCCeEEee---C-CCceEEEEEcCCCCeEEEEee
Q 029285          144 RDRHTCIAIRDVSKLKMILDK-AGISYTLS---K-SGRPAIFTRDPDANALEFTQV  194 (196)
Q Consensus       144 ~~~hi~f~v~dl~~~~~~l~~-~G~~~~~~---~-~g~~~~~~~DPdG~~iEl~e~  194 (196)
                      ++.|+++.|+|++++.+...+ .|.++...   + .+...+++.. +|..+++.+.
T Consensus         5 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~   59 (134)
T 3rmu_A            5 RLNHVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVNL-GNTKMELLHP   59 (134)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHTSCCEECCCEEEGGGTEEEEEEEC-SSSEEEEEEE
T ss_pred             eeeeEEEEeCCHHHHHHHHHHhcCCEEeEeeecCCCCEEEEEEec-CCEEEEEEec
Confidence            578999999999999999988 89887543   1 2334455554 5678888764

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A

Probab=89.17  E-value=2.1  Score=28.90  Aligned_cols=57  Identities=16%  Similarity=0.081  Sum_probs=38.0

Q ss_pred             eeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCC-ceeEEEEe-CCeEEEEEecCCC
Q 029285           75 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLP-YRGAWLWV-GAEMIHLMELPNP  132 (196)
Q Consensus        75 ~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~-~~~~~l~~-g~~~l~l~~~~~~  132 (196)
                      ++.|+++.|.|++++.+-..+ .|.++.........+ .+.+++.. +|..++|++....
T Consensus        71 ~~~~~~~~v~d~~~~~~~l~~-~G~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~~~~~  129 (135)
T 1f9z_A           71 AYGHIALSVDNAAEACEKIRQ-NGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKDA  129 (135)
T ss_dssp             SEEEEEEECSCHHHHHHHHHH-TTCEEEEEEEECTTSCCEEEEEECTTSCEEEEEEC---
T ss_pred             CccEEEEEeCCHHHHHHHHHH-CCCEEecCCccCCCCceeEEEEECCCCCEEEEEecCCC
Confidence            678999999999999999987 899887532111112 23455544 5778999876543

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis}

Probab=88.42  E-value=0.94  Score=30.21  Aligned_cols=53  Identities=17%  Similarity=0.322  Sum_probs=34.7

Q ss_pred             ceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEe-CCeEEEEE
Q 029285           74 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLM  127 (196)
Q Consensus        74 ~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~-g~~~l~l~  127 (196)
                      .++.|+++.|.|++++.+...+ .|.++.........+.+.+++.. +|..++|+
T Consensus        72 ~g~~~~~~~v~d~~~~~~~l~~-~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~  125 (126)
T 2p25_A           72 LGLRHLAFKVEHIEEVIAFLNE-QGIETEPLRVDDFTGKKMTFFFDPDGLPLELH  125 (126)
T ss_dssp             SSCCCEEEECSCHHHHHHHHHH-TTCCCCCCEECTTTCCEEEEEECTTCCEEEEE
T ss_pred             ccceEEEEEeCCHHHHHHHHHH-cCCccccccccCCCCcEEEEEECCCCCEEEee
Confidence            4678999999999999999887 78876542211122234455543 35566665

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A*

Probab=87.87  E-value=1.2  Score=30.79  Aligned_cols=50  Identities=14%  Similarity=0.136  Sum_probs=36.2

Q ss_pred             CceEEEEEECCHHHHHHHHHHCCCeEEeeCCCceEEEEEcCCCCeEEEEe
Q 029285          144 RDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQ  193 (196)
Q Consensus       144 ~~~hi~f~v~dl~~~~~~l~~~G~~~~~~~~g~~~~~~~DPdG~~iEl~e  193 (196)
                      ++.|+.+.|+|++++.+...+.|.++.....+...+.+.-++|..++|.+
T Consensus         4 ~l~hv~l~v~D~~~a~~FY~~LG~~~~~~~~~~~~~~~~~~~~~~l~l~~   53 (138)
T 2a4x_A            4 RISLFAVVVEDMAKSLEFYRKLGVEIPAEADSAPHTEAVLDGGIRLAWDT   53 (138)
T ss_dssp             EEEEEEEEESCHHHHHHHHHTTTCCCCGGGGGCSEEEEECTTSCEEEEEE
T ss_pred             eeeEEEEEECCHHHHHHHHHHcCCcEEecCCCCceEEEEcCCCeEEEEec
Confidence            56899999999999999888888877544322223444446777888775

>3vw9_A Lactoylglutathione lyase; glyoxalase, lyase-lyase inhibitor complex; HET: EPE HPJ; 1.47A {Homo sapiens} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* 2za0_A*

Probab=87.86  E-value=1.6  Score=31.85  Aligned_cols=55  Identities=13%  Similarity=0.173  Sum_probs=39.9

Q ss_pred             ceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEe-CCeEEEEEecC
Q 029285           74 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELP  130 (196)
Q Consensus        74 ~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~-g~~~l~l~~~~  130 (196)
                      .++.|+++.|.|++++.+-..+ .|.++...... ......+|+.. +|..++|++..
T Consensus       126 ~g~~hl~f~v~dv~~~~~~l~~-~G~~~~~~~~~-~~~~~~~~~~DPdG~~iel~~~~  181 (187)
T 3vw9_A          126 RGFGHIGIAVPDVYSACKRFEE-LGVKFVKKPDD-GKMKGLAFIQDPDGYWIEILNPN  181 (187)
T ss_dssp             CBEEEEEEECSCHHHHHHHHHH-TTCCEEECTTS-SSSTTCEEEECTTCCEEEEECGG
T ss_pred             CceeEEEEEECCHHHHHHHHHH-CCCeEeeCCcc-CCcceEEEEECCCCCEEEEEEcc
Confidence            4788999999999999999988 89998764322 21123345554 47789998754

>4hc5_A Glyoxalase/bleomycin resistance protein/dioxygena; MCSG, GEBA genomes, structural genomics, midwest center for structural genomics; HET: MSE GOL; 1.45A {Sphaerobacter thermophilus}

Probab=87.40  E-value=2.6  Score=28.26  Aligned_cols=54  Identities=9%  Similarity=0.234  Sum_probs=36.4

Q ss_pred             ceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEe-CCeEEEEEe
Q 029285           74 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLME  128 (196)
Q Consensus        74 ~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~-g~~~l~l~~  128 (196)
                      .+..|+.+.|.|++++.+-..+ .|.++.........+.+.+++.. +|..++|.+
T Consensus        78 ~~~~~~~~~v~d~~~~~~~l~~-~G~~~~~~~~~~~~g~~~~~~~DP~G~~~el~e  132 (133)
T 4hc5_A           78 GGYTGISLITRDIDEAYKTLTE-RGVTFTKPPEMMPWGQRATWFSDPDGNQFFLVE  132 (133)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHH-TTCEESSSCEECTTSCEEEEEECTTCEEEEEEE
T ss_pred             CCeEEEEEEeCCHHHHHHHHHH-CCCEeecCCCcCCCCCEEEEEECCCCCEEEEEe
Confidence            4678999999999999999998 79998742211112224445544 356777664

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygen virulence, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A

Probab=86.12  E-value=2.9  Score=29.10  Aligned_cols=48  Identities=21%  Similarity=0.215  Sum_probs=34.1

Q ss_pred             CCceEEEEEECCHHHHHHHHHH-CCCeEEeeCCCceEEEEEcCCCCeEEEEe
Q 029285          143 GRDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDPDANALEFTQ  193 (196)
Q Consensus       143 ~~~~hi~f~v~dl~~~~~~l~~-~G~~~~~~~~g~~~~~~~DPdG~~iEl~e  193 (196)
                      .++.|+++.|.|++++.+...+ .|.++.....+.  .++.- +|..++|.+
T Consensus        22 ~~l~hv~l~v~D~~~a~~FY~~vLG~~~~~~~~~~--~~l~~-~~~~l~l~~   70 (152)
T 3huh_A           22 DRIDHLVLTVSDISTTIRFYEEVLGFSAVTFKQNR--KALIF-GAQKINLHQ   70 (152)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHHTTCCEEEEETTTE--EEEEE-TTEEEEEEE
T ss_pred             ceeeEEEEEeCCHHHHHHHHHhcCCCEEEEccCCe--EEEEe-CCeEEEEec
Confidence            3678999999999999999988 899887664332  22222 345666654

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A*

Probab=85.97  E-value=2.5  Score=30.65  Aligned_cols=55  Identities=15%  Similarity=0.199  Sum_probs=39.0

Q ss_pred             ceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEe-CCeEEEEEecC
Q 029285           74 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELP  130 (196)
Q Consensus        74 ~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~-g~~~l~l~~~~  130 (196)
                      .++.|++|.|.|++++.+-..+ .|.++..... .....+.+|+.. +|..++|++..
T Consensus       123 ~g~~hi~f~v~dvd~~~~~l~~-~G~~~~~~p~-~~~~~~~~~~~DPdG~~iel~~~~  178 (184)
T 2za0_A          123 RGFGHIGIAVPDVYSACKRFEE-LGVKFVKKPD-DGKMKGLAFIQDPDGYWIEILNPN  178 (184)
T ss_dssp             CCEEEEEEECSCHHHHHHHHHH-TTCCEEECTT-SSSSTTCEEEECTTCCEEEEECTT
T ss_pred             CCeeEEEEEeCCHHHHHHHHHH-CCCeeecCCc-CCCceeEEEEECCCCCEEEEEecC
Confidence            4678999999999999999998 8998875322 111123455554 46788888653

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP}

Probab=85.70  E-value=2.5  Score=28.90  Aligned_cols=50  Identities=10%  Similarity=0.004  Sum_probs=35.4

Q ss_pred             CceEEEEEECCHHHHHHHHHH-CCCeEEeeCCC---ceEEEEEcCCCCeEEEEee
Q 029285          144 RDRHTCIAIRDVSKLKMILDK-AGISYTLSKSG---RPAIFTRDPDANALEFTQV  194 (196)
Q Consensus       144 ~~~hi~f~v~dl~~~~~~l~~-~G~~~~~~~~g---~~~~~~~DPdG~~iEl~e~  194 (196)
                      ++.|+++.|+|++++.+...+ .|.++.....+   .....+.. +|..++|.+.
T Consensus         5 ~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~-~~~~l~l~~~   58 (136)
T 2rk0_A            5 GVSHVSLTVRDLDISCRWYTEILDWKELVRGRGDTTSFAHGVLP-GGLSIVLREH   58 (136)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEEEEEEECSSEEEEEEECT-TSCEEEEEEE
T ss_pred             cccEEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCceEEEEEc-CCCEEEEEeC
Confidence            467999999999999998866 79887654321   22222233 7888998876

>3p8a_A Uncharacterized protein; mainly antiparallel beta sheets, alpha and beta protein, UNK function; HET: MSE BTB PG4; 1.95A {Staphylococcus aureus}

Probab=85.60  E-value=2  Score=34.46  Aligned_cols=35  Identities=14%  Similarity=0.201  Sum_probs=31.2

Q ss_pred             ceeceeeEEEEEcCCHHHHHHHHHhccCCEEeeec
Q 029285           71 YGVVSVHHVGILCENLERSLEFYQNILGLEINEAR  105 (196)
Q Consensus        71 ~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~  105 (196)
                      -...++.+|.+.+.|.+++++.|.++||.......
T Consensus       186 nGa~gI~~vvi~~~dp~~~~~~~~~l~g~~~~~~~  220 (274)
T 3p8a_A          186 QKQFSIETVIVKSKNRSQTVSNWLKWFDMDIVEEN  220 (274)
T ss_dssp             CTTEEEEEEEEEETTHHHHHHHHHHHHCCEEEEEC
T ss_pred             CccceEEEEEEEeCCHHHHHHHHHHHhCCCccccC
Confidence            34679999999999999999999999999997654

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}

Probab=85.46  E-value=1.4  Score=30.27  Aligned_cols=51  Identities=10%  Similarity=0.094  Sum_probs=34.3

Q ss_pred             CceEEEEEECCHHHHHHHHHHCCCeEEeeCCC-ceEEEEEcCCCCeEEEEee
Q 029285          144 RDRHTCIAIRDVSKLKMILDKAGISYTLSKSG-RPAIFTRDPDANALEFTQV  194 (196)
Q Consensus       144 ~~~hi~f~v~dl~~~~~~l~~~G~~~~~~~~g-~~~~~~~DPdG~~iEl~e~  194 (196)
                      .+.|+++.|+|+++..+...+.|+++.....+ +..+++...+|..++|...
T Consensus         6 ~i~hv~l~v~D~~~a~~FY~~LG~~~~~~~~~~~~~~~~~~~~~~~l~l~~~   57 (128)
T 3g12_A            6 LITSITINTSHLQGMLGFYRIIGFQFTASKVDKGSEVHRAVHNGVEFSLYSI   57 (128)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHHTCCCEEC-----CCEEEEEETTEEEEEEEC
T ss_pred             eEEEEEEEcCCHHHHHHHHHHCCCEEecccCCCCCEEEEEeCCCeEEEEEEC
Confidence            56899999999999988887788887655222 2334444345667776543

>1k4n_A Protein EC4020, protein YECM; structural genomics, A NEW fold of protein, PSI, protein structure initiative; 1.60A {Escherichia coli} SCOP: d.32.1.5

Probab=84.84  E-value=10  Score=28.63  Aligned_cols=95  Identities=17%  Similarity=0.188  Sum_probs=59.5

Q ss_pred             ceeeEEEEEcCCHHHHHHHHHhccCCE-EeeecCCCCCCcee----EEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEE
Q 029285           74 VSVHHVGILCENLERSLEFYQNILGLE-INEARPHDKLPYRG----AWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHT  148 (196)
Q Consensus        74 ~~l~hv~l~v~Dl~~a~~FY~~vLG~~-~~~~~~~~~~~~~~----~~l~~g~~~l~l~~~~~~~~~~~~p~~~~~~~hi  148 (196)
                      ..++|++++|++.+.+.+|-+..+..- +..+..-.+.+.-.    .=+.+++..+.+++.+-+...  .+.+ .|.-||
T Consensus        42 ~~~DHIalRvn~~~~Ae~~~~~l~~~G~llSen~INGRPI~l~~L~qPL~~~~~~I~cvELP~P~~K--~Yp~-eGWEHI  118 (192)
T 1k4n_A           42 LTADHISLRCHQNATAERWRRGFEQCGELLSENMINGRPICLFKLHEPVQVAHWQFSIVELPWPGEK--RYPH-EGWEHI  118 (192)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHHTTTEEEEEEEEETTEEEEEEEEEEEEEETTEEEEEEEEECCCSS--CCSS-CEEEEE
T ss_pred             ccCcEEEEecCCHHHHHHHHHHHHHhchhhhccccCCeeEEEEEcCCCceeCCeEEEEEEcCCCCCC--CCCC-CCceEE
Confidence            468999999999999999999987643 22221111111100    114567889999988776531  2223 467899


Q ss_pred             EEEEC----CHHHHHHH------HHHCCCeEEe
Q 029285          149 CIAIR----DVSKLKMI------LDKAGISYTL  171 (196)
Q Consensus       149 ~f~v~----dl~~~~~~------l~~~G~~~~~  171 (196)
                      -|.++    ++++..++      +.+.|+++..
T Consensus       119 E~Vlp~~~~t~~~~~~~l~~~~~~~~~gikvK~  151 (192)
T 1k4n_A          119 EIVLPGDPETLNARALALLSDEGLSLPGISVKT  151 (192)
T ss_dssp             EEECCSCGGGHHHHHHHTSCHHHHHSTTCEEEE
T ss_pred             EEEecCCcCCHHHHHHHHhhcccccCCCcEEEe
Confidence            99988    33443333      3346788754

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1

Probab=84.44  E-value=5  Score=27.62  Aligned_cols=52  Identities=19%  Similarity=0.181  Sum_probs=38.3

Q ss_pred             CCceEEEEEECCHHHHHHHHHH-CCCeEEeeC---CC-ceEEEEEcCC---CCeEEEEee
Q 029285          143 GRDRHTCIAIRDVSKLKMILDK-AGISYTLSK---SG-RPAIFTRDPD---ANALEFTQV  194 (196)
Q Consensus       143 ~~~~hi~f~v~dl~~~~~~l~~-~G~~~~~~~---~g-~~~~~~~DPd---G~~iEl~e~  194 (196)
                      .++.|+.+.|.|+++..+...+ .|.++....   .+ ....++.-++   +..++|.+.
T Consensus         7 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~   66 (144)
T 2c21_A            7 RRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYN   66 (144)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTTTSCEEEEEEE
T ss_pred             ceeEEEEEEeCCHHHHHHHHHhcCCCEEEEeeecCCCCeEEEEEEcCCCCCceEEEEEec
Confidence            3678999999999999999875 899875432   22 2346666554   588998875

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila}

Probab=84.21  E-value=1.8  Score=30.62  Aligned_cols=55  Identities=15%  Similarity=0.184  Sum_probs=38.0

Q ss_pred             eeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEe-CCeEEEEEecCC
Q 029285           75 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPN  131 (196)
Q Consensus        75 ~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~-g~~~l~l~~~~~  131 (196)
                      ++.|+.+.|.|++++.+-..+ .|.++......... .+.+++.- +|..++|++...
T Consensus        98 g~~~l~f~VdDvda~~~~l~~-~Gv~~~~~p~~~~~-g~~~~f~DPdGn~iel~q~~~  153 (155)
T 4g6x_A           98 GIPAASFAVDDIAAEYERLSA-LGVRFTQEPTDMGP-VVTAILDDTCGNLIQLMQIAY  153 (155)
T ss_dssp             TCCSEEEEESCHHHHHHHHHH-TTCCEEEEEEECSS-CEEEEEECSSSCEEEEEEC--
T ss_pred             CceEEEeeechhhhhhhHHhc-CCcEEeeCCEEcCC-eEEEEEECCCCCEEEEEEECC
Confidence            567999999999999999988 89887653221121 24556654 477899988643

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A*

Probab=84.19  E-value=3.8  Score=27.36  Aligned_cols=48  Identities=17%  Similarity=0.247  Sum_probs=33.5

Q ss_pred             CCceEEEEEECCHHHHHHHHHH-CCCeEEeeCCCceEEEEEcCCCCeEEEEe
Q 029285          143 GRDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDPDANALEFTQ  193 (196)
Q Consensus       143 ~~~~hi~f~v~dl~~~~~~l~~-~G~~~~~~~~g~~~~~~~DPdG~~iEl~e  193 (196)
                      .++.|+++.|+|++++.+...+ .|.++.....+.  +++.- +|..+++.+
T Consensus         9 ~~i~hi~l~v~D~~~a~~FY~~~lG~~~~~~~~~~--~~~~~-~~~~~~l~~   57 (133)
T 3ey7_A            9 SHLDHLVLTVADIPTTTNFYEKVLGMKAVSFGAGR--IALEF-GHQKINLHQ   57 (133)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHHHHCCEEEEETTTE--EEEEE-TTEEEEEEE
T ss_pred             cccCEEEEEECCHHHHHHHHHHccCceEEEecCCe--EEEEc-CCEEEEEEc
Confidence            4678999999999999999887 899887654332  22222 345566554

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str}

Probab=82.17  E-value=4  Score=27.28  Aligned_cols=53  Identities=11%  Similarity=0.079  Sum_probs=37.6

Q ss_pred             ceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEe-CCeEEEEEec
Q 029285           74 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMEL  129 (196)
Q Consensus        74 ~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~-g~~~l~l~~~  129 (196)
                      .+..|+++.|.|++++.+...+ .|.++....+  ....+.+++.. +|..++|.+.
T Consensus        71 ~~~~~~~f~v~d~~~~~~~l~~-~G~~~~~~~~--~~g~~~~~~~DPdG~~iel~~~  124 (126)
T 2qqz_A           71 AKRAHPAFYVLKIDEFKQELIK-QGIEVIDDHA--RPDVIRFYVSDPFGNRIEFMEN  124 (126)
T ss_dssp             CSSSCEEEEETTHHHHHHHHHH-TTCCCEEECS--STTEEEEEEECTTSCEEEEEEE
T ss_pred             CCceEEEEEcCCHHHHHHHHHH-cCCCccCCCC--CCCeeEEEEECCCCCEEEEEeC
Confidence            4678999999999999999988 7988775432  22234455544 4667887764

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A*

Probab=82.11  E-value=4.6  Score=27.38  Aligned_cols=49  Identities=2%  Similarity=-0.114  Sum_probs=34.4

Q ss_pred             CCceEEEEEECCHHHHHHHHHH-CCCeEEeeCCCceEEEEEcCCCCeEEEEe
Q 029285          143 GRDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDPDANALEFTQ  193 (196)
Q Consensus       143 ~~~~hi~f~v~dl~~~~~~l~~-~G~~~~~~~~g~~~~~~~DPdG~~iEl~e  193 (196)
                      .++.|+.+.|.|+++..+...+ .|.++....+  ..+.+...+|..+.|.+
T Consensus        12 ~~i~~v~l~v~D~~~s~~FY~~~lG~~~~~~~~--~~~~~~~~~~~~l~l~~   61 (132)
T 3sk2_A           12 ITPNLQLVYVSNVERSTDFYRFIFKKEPVFVTP--RYVAFPSSGDALFAIWS   61 (132)
T ss_dssp             CCCCEEEEECSCHHHHHHHHHHHHTCCCSEECS--SEEEEECSTTCEEEEES
T ss_pred             ceeeEEEEEECCHHHHHHHHHHHcCCeEEEcCC--CEEEEEcCCCcEEEEEe
Confidence            4778999999999999888875 7877654332  22344555667777765

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125}

Probab=81.38  E-value=7.1  Score=27.16  Aligned_cols=49  Identities=18%  Similarity=0.152  Sum_probs=35.8

Q ss_pred             CCceEEEEEECCHHHHHHHH----HHCCCeEEeeCCCceEEEEEcCCCCeEEEEee
Q 029285          143 GRDRHTCIAIRDVSKLKMIL----DKAGISYTLSKSGRPAIFTRDPDANALEFTQV  194 (196)
Q Consensus       143 ~~~~hi~f~v~dl~~~~~~l----~~~G~~~~~~~~g~~~~~~~DPdG~~iEl~e~  194 (196)
                      .++.|+++.|.|++++.+..    +..|.++.....++. .|+.  +|..++|.+.
T Consensus        19 ~~i~hv~l~v~Dl~~a~~FY~~~~~~LG~~~~~~~~~~~-~~~~--g~~~l~l~~~   71 (146)
T 3ct8_A           19 GMLHHVEINVDHLEESIAFWDWLLGELGYEDYQSWSRGK-SYKH--GKTYLVFVQT   71 (146)
T ss_dssp             TSCCEEEEEESCHHHHHHHHHHHHHHTTCEEEEEETTEE-EEEE--TTEEEEEEEC
T ss_pred             cceeEEEEEeCCHHHHHHHHHhhhhhCCCEEEEecCCCc-eEec--CCeEEEEEEc
Confidence            36789999999999998887    568998865543332 3444  5667888764

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens}

Probab=81.18  E-value=3.9  Score=28.52  Aligned_cols=49  Identities=8%  Similarity=-0.014  Sum_probs=34.8

Q ss_pred             CceEEEEEECCHHHHHHHHHH-CCCeEEeeCCCceEEEEEcCCCCeEEEEee
Q 029285          144 RDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDPDANALEFTQV  194 (196)
Q Consensus       144 ~~~hi~f~v~dl~~~~~~l~~-~G~~~~~~~~g~~~~~~~DPdG~~iEl~e~  194 (196)
                      ++.|+.+.|+|++++.+...+ .|.++....++  ..++.-.+|..++|.+.
T Consensus        25 ~l~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~--~~~~~~~~~~~l~l~~~   74 (144)
T 2kjz_A           25 HPDFTILYVDNPPASTQFYKALLGVDPVESSPT--FSLFVLANGMKLGLWSR   74 (144)
T ss_dssp             CCCEEEEEESCHHHHHHHHHHHHTCCCSEEETT--EEEEECTTSCEEEEEET
T ss_pred             ceeEEEEEeCCHHHHHHHHHHccCCEeccCCCC--eEEEEcCCCcEEEEEeC
Confidence            678999999999999888876 78776543322  24455455777877653

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2

Probab=80.65  E-value=3.6  Score=27.12  Aligned_cols=53  Identities=15%  Similarity=0.196  Sum_probs=35.0

Q ss_pred             eeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEe-CCeEEEEEe
Q 029285           75 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLME  128 (196)
Q Consensus        75 ~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~-g~~~l~l~~  128 (196)
                      ...|+.+.|.|++++.+-..+ .|.++.........+.+..++.. +|..++|++
T Consensus        64 ~~~~~~~~v~d~~~~~~~l~~-~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~  117 (119)
T 2pjs_A           64 DVPDLSIEVDNFDEVHARILK-AGLPIEYGPVTEAWGVQRLFLRDPFGKLINILS  117 (119)
T ss_dssp             CCCSEEEEESCHHHHHHHHHH-TTCCCSEEEEECTTSCEEEEEECTTSCEEEEEE
T ss_pred             ceeEEEEEECCHHHHHHHHHH-CCCccccCCccCCCccEEEEEECCCCCEEEEEe
Confidence            457999999999999999987 78876543211112234455544 466777765

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	196
d1zswa1	144	d.32.1.10 (A:1-144) Hypothetical protein BC1024 {B	2e-15
d2c21a1	139	d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathion	2e-14
d1f9za_	135	d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lya	9e-13
d1r9ca_	130	d.32.1.2 (A:) Fosfomycin resistance protein FosX {	1e-12
d1nkia_	134	d.32.1.2 (A:) Fosfomycin resistance protein A (Fos	1e-11
d1qipa_	176	d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lya	3e-11
d1npba_	140	d.32.1.2 (A:) Fosfomycin resistance protein A (Fos	7e-11
d1zswa2	170	d.32.1.10 (A:145-314) Hypothetical protein BC1024	2e-10
d1mpya2	162	d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (met	2e-10
d1f1ua2	176	d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxy	4e-10
d1xrka_	120	d.32.1.2 (A:) Bleomycin resistance protein, BRP {S	1e-09
d1xqaa_	113	d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillu	1e-08
d1jc4a_	145	d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propion	2e-08
d2i7ra1	115	d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Str	2e-08
d1mpya1	145	d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metap	4e-08
d1ss4a_	149	d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillu	4e-08
d1twua_	137	d.32.1.8 (A:) Hypothetical protein YycE {Bacillus	7e-08
d1klla_	128	d.32.1.2 (A:) Mitomycin resistance protein D, MRD	1e-07
d1lgta1	131	d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygena	1e-07
d1sqia1	149	d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxyge	2e-07
d1f1ua1	146	d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxyge	4e-07
d1sp8a2	224	d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxy	9e-07
d1t47a1	163	d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxyg	2e-06
d1kw3b2	156	d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxyge	3e-06
d1kw3b1	132	d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygena	6e-06
d2pjsa1	111	d.32.1.2 (A:3-113) Uncharacterized protein Atu1953	2e-05
d1sp8a1	172	d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxyg	2e-05
d1jifa_	122	d.32.1.2 (A:) Bleomycin resistance protein, BRP {S	3e-05
d1ecsa_	120	d.32.1.2 (A:) Bleomycin resistance protein, BRP {K	6e-05
d1sqda1	167	d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxyg	4e-04
d1sqda2	230	d.32.1.3 (A:181-410) 4-hydroxyphenylpyruvate dioxy	0.002

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]} Length = 144

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

 Score = 67.7 bits (164), Expect = 2e-15
 Identities = 23/133 (17%), Positives = 46/133 (34%), Gaps = 7/133 (5%)

Query: 71  YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV---GAEMIHLM 127
           Y +   HH+ ++ +N   +  FY+N+LGL   +   +   P      +    G+    L 
Sbjct: 2   YEIKGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELS 61

Query: 128 ELPNPDPLSGRPEHGGRDR--HTCIAIRDVSKLKMILDKAGISYT--LSKSGRPAIFTRD 183
               P             R      +   +   K   +K  + ++   + + RPA+   D
Sbjct: 62  FFEIPLVGRTYRGTNAITRIGLLVPSEDSLHYWKERFEKFDVKHSEMTTYANRPALQFED 121

Query: 184 PDANALEFTQVDG 196
            +   L     +G
Sbjct: 122 AEGLRLVLLVSNG 134

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]} Length = 139

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

 Score = 65.1 bits (157), Expect = 2e-14
 Identities = 26/118 (22%), Positives = 44/118 (37%)

Query: 76  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPL 135
           + H  I   +L+RS++FY   LG+++       +  Y   +L  G EM   +     +  
Sbjct: 4   MLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYG 63

Query: 136 SGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQ 193
               +H     H  I + DV +L   + K  +            F  DPD   +E   
Sbjct: 64  VTSYKHDEAYGHIAIGVEDVKELVADMRKHDVPIDYEDESGFMAFVVDPDGYYIELLN 121

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]} Length = 135

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

 Score = 60.8 bits (146), Expect = 9e-13
 Identities = 22/122 (18%), Positives = 49/122 (40%), Gaps = 5/122 (4%)

Query: 77  HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLS 136
            H  +   +L+RS++FY  +LG+++     + +  Y  A++  G E    +     +   
Sbjct: 4   LHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGV 63

Query: 137 GRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP-----AIFTRDPDANALEF 191
            + E G    H  +++ + ++    + + G + T              F  DPD   +E 
Sbjct: 64  DKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIEL 123

Query: 192 TQ 193
            +
Sbjct: 124 IE 125

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]} Length = 130

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

 Score = 59.9 bits (144), Expect = 1e-12
 Identities = 16/122 (13%), Positives = 34/122 (27%), Gaps = 11/122 (9%)

Query: 75  SVHHVGILCENLERSLEFYQNILGLEINEARPH-DKLPYRGAWLWVGAEMIHLMELPNPD 133
            + H+  +  +LER     + +       A         R  +  +G   + +M+     
Sbjct: 4   GLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGDIWVAIMQGEKLA 63

Query: 134 PLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP----AIFTRDPDANAL 189
                           I   D  +    + K G+     +        +I+  D D +  
Sbjct: 64  E------RSYNHIAFKIDDADFDRYAERVGKLGLDMRPPRPRVEGEGRSIYFYDDDNHMF 117

Query: 190 EF 191
           E 
Sbjct: 118 EL 119

>d1nkia_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Pseudomonas aeruginosa [TaxId: 287]} Length = 134

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 57.6 bits (138), Expect = 1e-11
 Identities = 25/118 (21%), Positives = 48/118 (40%), Gaps = 11/118 (9%)

Query: 75  SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP 134
            ++H+ +   +L  S+ FY+++LG  +           +GA+L +G+  + L   P    
Sbjct: 4   GLNHLTLAVADLPASIAFYRDLLGFRLEAR------WDQGAYLELGSLWLCLSREPQYGG 57

Query: 135 LSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISY-TLSKSGRPAIFTRDPDANALEF 191
               P          IA  D ++    L   G+     ++S   + +  DPD + LE 
Sbjct: 58  ----PAADYTHYAFGIAAADFARFAAQLRAHGVREWKQNRSEGDSFYFLDPDGHRLEA 111

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.3 bits (137), Expect = 3e-11
 Identities = 21/144 (14%), Positives = 46/144 (31%), Gaps = 27/144 (18%)

Query: 77  HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE-------------- 122
               +  ++ ++SL+FY  +LG+ + +      + +   +L    +              
Sbjct: 25  QQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWA 84

Query: 123 -----MIHLMELPNPDPLSGRPEHGGRD-----RHTCIAIRDVSKLKMILDKAGISYT-- 170
                 + L      +    +  H G        H  IA+ DV       ++ G+ +   
Sbjct: 85  LSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKK 144

Query: 171 -LSKSGRPAIFTRDPDANALEFTQ 193
                 +   F +DPD   +E   
Sbjct: 145 PDDGKMKGLAFIQDPDGYWIEILN 168

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]} Length = 140

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

 Score = 55.8 bits (133), Expect = 7e-11
 Identities = 24/118 (20%), Positives = 46/118 (38%), Gaps = 8/118 (6%)

Query: 75  SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP 134
           S++H+ +   +L++S+ F+  +LGL ++           G      +       +P    
Sbjct: 4   SLNHLTLAVSDLQKSVTFWHELLGLTLHARWNTGAYLTCGDLWVCLSYDEARQYVP---- 59

Query: 135 LSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLS-KSGRPAIFTRDPDANALEF 191
                E         +A  D   L   L++AG++     KS   + +  DPD + LE 
Sbjct: 60  ---PQESDYTHYAFTVAEEDFEPLSQRLEQAGVTIWKQNKSEGASFYFLDPDGHKLEL 114

>d1zswa2 d.32.1.10 (A:145-314) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]} Length = 170

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

 Score = 55.1 bits (132), Expect = 2e-10
 Identities = 12/127 (9%), Positives = 31/127 (24%), Gaps = 9/127 (7%)

Query: 70  DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMEL 129
            + +  +  V +    L++       I G          +      +  +  E    + +
Sbjct: 7   KHQIQGMGSVELTVRRLDKMASTLTEIFGY-----TEVSRNDQEAIFQSIKGEAFGEIVV 61

Query: 130 PNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKS----GRPAIFTRDPD 185
              D  + +P  G           D              +  S         +++ R+ +
Sbjct: 62  KYLDGPTEKPGRGSIHHLAIRVKNDAELAYWEEQVKQRGFHSSGIIDRFYFKSLYFRESN 121

Query: 186 ANALEFT 192
               E  
Sbjct: 122 GILFEIA 128

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]} Length = 162

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

 Score = 55.3 bits (132), Expect = 2e-10
 Identities = 13/120 (10%), Positives = 32/120 (26%)

Query: 72  GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPN 131
             V   H  +  + L  + + +  +LG  + E    +       +L +  +   +  + +
Sbjct: 2   AAVRFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTKAHDVAFIHH 61

Query: 132 PDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEF 191
           P+           +    +                       +    I+  DP  N  E 
Sbjct: 62  PEKGRLHHVSFHLETWEDLLRAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSGNRNEV 121

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]} Length = 176

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

 Score = 54.5 bits (130), Expect = 4e-10
 Identities = 19/120 (15%), Positives = 37/120 (30%), Gaps = 2/120 (1%)

Query: 73  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 132
           +V + H   +  ++ R   + +  LG  ++E           AW+     +         
Sbjct: 3   LVRLDHFNQVTPDVPRGRAYLE-DLGFRVSEDIKDSDGVTYAAWMHRKQTVHDTALTGGN 61

Query: 133 DPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGR-PAIFTRDPDANALEF 191
            P          ++H  I I D      I D+               ++  DPD + +E 
Sbjct: 62  GPRMHHVAFATHEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDGHRIEI 121

>d1xrka_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptoalloteichus hindustanus [TaxId: 2017]} Length = 120

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptoalloteichus hindustanus [TaxId: 2017]

 Score = 51.9 bits (123), Expect = 1e-09
 Identities = 11/116 (9%), Positives = 27/116 (23%), Gaps = 9/116 (7%)

Query: 81  ILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPE 140
           +   ++  ++EF+ + LG                A +      + +  + +         
Sbjct: 10  LTARDVAEAVEFWTDRLGFSRVFVEDDF------AGVVRDDVTLFISAVQDQVVPDNTQA 63

Query: 141 HGGRDRHTCIAIRDVSKLKMILDKAGISYTLS---KSGRPAIFTRDPDANALEFTQ 193
                    +       +      A          +        RDP  N + F  
Sbjct: 64  WVWVRGLDELYAEWSEVVSTNFRDASGPAMTEIVEQPWGREFALRDPAGNCVHFVA 119

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]} Length = 113

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

 Score = 49.0 bits (115), Expect = 1e-08
 Identities = 15/118 (12%), Positives = 32/118 (27%), Gaps = 10/118 (8%)

Query: 76  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPL 135
           + H+ +   ++  + EF +   GL  +  R +     R    ++   M            
Sbjct: 4   IKHLNLTVADVVAAREFLEKYFGLTCSGTRGNAFAVMRDNDGFILTLMKGKEV------- 56

Query: 136 SGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP-AIFTRDPDANALEFT 192
             +            +   V K+   L + G      K       +   P    +E  
Sbjct: 57  --QYPKTFHVGFPQESEEQVDKINQRLKEDGFLVEPPKHAHAYTFYVEAPGGFTIEVM 112

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]} Length = 145

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

 Score = 49.2 bits (116), Expect = 2e-08
 Identities = 17/138 (12%), Positives = 40/138 (28%), Gaps = 17/138 (12%)

Query: 73  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLW---------VGAEM 123
            + + HV   C + + + ++YQ   G        + +       +             ++
Sbjct: 5   FICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQV 64

Query: 124 IHLMELPNPDPLSGRPEHGGRD-RHTCIAIRDVSKLKMILDKAGISYT-----LSKSGRP 177
           +  +   +         +G     H    + D+  +   L + G+        L   G  
Sbjct: 65  MAPLNDESTVAKWLAKHNGRAGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGGNR 124

Query: 178 AIF--TRDPDANALEFTQ 193
             F   +      +E TQ
Sbjct: 125 INFMHPKSGKGVLIELTQ 142

>d2i7ra1 d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Streptococcus pneumoniae [TaxId: 1313]} Length = 115

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypotheical protein SP0731
species: Streptococcus pneumoniae [TaxId: 1313]

 Score = 48.3 bits (114), Expect = 2e-08
 Identities = 17/124 (13%), Positives = 43/124 (34%), Gaps = 15/124 (12%)

Query: 75  SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP 134
           +++ + I+  N+ +     ++IL  + + A           +      ++       P  
Sbjct: 2   NLNQLDIIVSNVPQVCADLEHILDKKADYANDG-----FAQFTIGSHCLMLSQNHLVP-- 54

Query: 135 LSGRPEHGGRDRHTCIAIRDV----SKLKMILDKAGISYTLSKSGRPAIFTRDPDANALE 190
                E+        I + DV     +L  +  K     T++  G  ++  + P    L+
Sbjct: 55  ----LENFQSGIIIHIEVEDVDQNYKRLNELGIKVLHGPTVTDWGTESLLVQGPAGLVLD 110

Query: 191 FTQV 194
           F ++
Sbjct: 111 FYRM 114

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]} Length = 145

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

 Score = 48.4 bits (114), Expect = 4e-08
 Identities = 20/125 (16%), Positives = 38/125 (30%), Gaps = 14/125 (11%)

Query: 72  GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPN 131
           GV+   HV +   ++ ++LE Y  +LGL        D+      +L    E+     +  
Sbjct: 4   GVMRPGHVQLRVLDMSKALEHYVELLGLI-----EMDRDDQGRVYLKAWTEVDKFSLVLR 58

Query: 132 PDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP-----AIFTRDPDA 186
                G    G +        +    L       G +     +G        +  + P  
Sbjct: 59  EADEPGMDFMGFKVVDEDALRQLERDLM----AYGCAVEQLPAGELNSCGRRVRFQAPSG 114

Query: 187 NALEF 191
           +  E 
Sbjct: 115 HHFEL 119

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]} Length = 149

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

 Score = 48.1 bits (113), Expect = 4e-08
 Identities = 15/140 (10%), Positives = 39/140 (27%), Gaps = 19/140 (13%)

Query: 73  VVSVHHVGILCENLERSLEFYQNILGLEINE------------ARPHDKLPYRGAWLWVG 120
           ++ + +V I+ E+L+ ++ F++ I                         +         G
Sbjct: 7   LLRMDNVSIVVESLDNAISFFEEIGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDG 66

Query: 121 AEMIHLMELPNPDPLSGRPEHGGRD---RHTCIAIRDVSKLKMILDKAGISY----TLSK 173
              I L     P  ++                  + D+ ++   L K G          +
Sbjct: 67  HSRIELSRFLTPPTIADHRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYE 126

Query: 174 SGRPAIFTRDPDANALEFTQ 193
           +     + R  +   +   +
Sbjct: 127 NSYRLCYIRGVEGILIGLAE 146

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]} Length = 137

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

 Score = 47.6 bits (112), Expect = 7e-08
 Identities = 17/125 (13%), Positives = 30/125 (24%), Gaps = 9/125 (7%)

Query: 78  HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSG 137
            +      L+  + FY+  L L+                +  G                 
Sbjct: 12  RIARPTGQLDEIIRFYEEGLCLKRIG---EFSQHNGYDGVMFGLPHADYHLEFTQYEGGS 68

Query: 138 RPEHGGRDRHTCIAIRDVSKLKMI---LDKAGISYTLSKS---GRPAIFTRDPDANALEF 191
                  D      + +  +L  I   L   G     S++       +   DPD   + F
Sbjct: 69  TAPVPHPDSLLVFYVPNAVELAAITSKLKHMGYQEVESENPYWSNGGVTIEDPDGWRIVF 128

Query: 192 TQVDG 196
               G
Sbjct: 129 MNSKG 133

>d1klla_ d.32.1.2 (A:) Mitomycin resistance protein D, MRD {Streptomyces lavendulae [TaxId: 1914]} Length = 128

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Mitomycin resistance protein D, MRD
species: Streptomyces lavendulae [TaxId: 1914]

 Score = 46.6 bits (109), Expect = 1e-07
 Identities = 21/124 (16%), Positives = 40/124 (32%), Gaps = 7/124 (5%)

Query: 76  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPL 135
           +    ++ E++ +S+EFY+  +G+EI                 +      +  + + DP 
Sbjct: 3   ISLFAVVVEDMAKSMEFYRK-MGVEIPAEADSAPHTEAVLDGGIRLAWDTVETVRSYDPE 61

Query: 136 SGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK------SGRPAIFTRDPDANAL 189
              P  G R           S  K   +     Y           G+     +DPD N +
Sbjct: 62  WQAPTGGHRFAIAFEFPDTASVDKKYAELVDAGYEGHLKPWNAVWGQRYAIVKDPDGNVV 121

Query: 190 EFTQ 193
           +   
Sbjct: 122 DLFA 125

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]} Length = 131

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

 Score = 46.5 bits (109), Expect = 1e-07
 Identities = 18/126 (14%), Positives = 36/126 (28%), Gaps = 19/126 (15%)

Query: 73  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 132
           + S+ ++G    ++     F    LGL       +      G    + +    +      
Sbjct: 2   IRSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTDN------GDLFRIDSRAWRIAVQQGE 55

Query: 133 DPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP-------AIFTRDPD 185
                     G   +       ++++   L +AGI+ T   +           I   DP 
Sbjct: 56  VD---DLAFAG---YEVADAAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITFADPF 109

Query: 186 ANALEF 191
              LE 
Sbjct: 110 GLPLEI 115

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]} Length = 149

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.0 bits (108), Expect = 2e-07
 Identities = 14/101 (13%), Positives = 30/101 (29%), Gaps = 5/101 (4%)

Query: 72  GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPN 131
             +  H V     N +++  FY N +G E    +  +          +    I  +    
Sbjct: 8   RFLHFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQGKIVFVLCSA 67

Query: 132 PDPLSG-----RPEHGGRDRHTCIAIRDVSKLKMILDKAGI 167
            +P +        +HG   +     + D   +     + G 
Sbjct: 68  LNPWNKEMGDHLVKHGDGVKDIAFEVEDCEHIVQKARERGA 108

>d1f1ua1 d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]} Length = 146

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

 Score = 45.4 bits (106), Expect = 4e-07
 Identities = 19/124 (15%), Positives = 39/124 (31%), Gaps = 15/124 (12%)

Query: 73  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 132
           +V   ++ I+  +L +S EFY ++LGL + E   +               ++    +   
Sbjct: 14  IVRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDENTIYLRSLEEFIHHNLVLRQGPIAAV 73

Query: 133 DPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP-----AIFTRDPDAN 187
                         +   +  +V   +    + G      K G       ++   DP   
Sbjct: 74  ----------AAFAYRVKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRVEDPLGF 123

Query: 188 ALEF 191
             EF
Sbjct: 124 PYEF 127

>d1sp8a2 d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]} Length = 224

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

 Score = 45.5 bits (107), Expect = 9e-07
 Identities = 14/112 (12%), Positives = 29/112 (25%), Gaps = 13/112 (11%)

Query: 69  IDYGVVSVHHVGILCENLERSLEFYQNILGLEI-------NEARPHDKLPYRGAWLWVGA 121
            DYG+    H+      L  +  ++    G          +       L           
Sbjct: 3   ADYGLSRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSEN 62

Query: 122 EMIHLMELPNPDPLSGRPE------HGGRDRHTCIAIRDVSKLKMILDKAGI 167
            ++ L E  +      + +       G   +H  +A  DV +    +     
Sbjct: 63  VLLPLNEPVHGTKRRSQIQTFLDHHGGPGVQHMALASDDVLRTLREMQARSA 114

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]} Length = 163

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

 Score = 43.7 bits (102), Expect = 2e-06
 Identities = 16/105 (15%), Positives = 31/105 (29%), Gaps = 8/105 (7%)

Query: 71  YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV--GAEMIHLME 128
           + V  +  V     N +++  +Y    G+++      +      A   +  G+    L  
Sbjct: 3   FPVKGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSARFVLTS 62

Query: 129 LPNPDPLSGRP------EHGGRDRHTCIAIRDVSKLKMILDKAGI 167
           +  P    G        EHG       I + D         + G 
Sbjct: 63  VIKPATPWGHFLADHVAEHGDGVVDLAIEVPDARAAHAYAIEHGA 107

>d1kw3b2 d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]} Length = 156

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

 Score = 43.2 bits (101), Expect = 3e-06
 Identities = 20/124 (16%), Positives = 37/124 (29%), Gaps = 11/124 (8%)

Query: 76  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPL 135
           + H      +  +++ FY  +LG  +++       P            +H     +   L
Sbjct: 11  IGHFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAH----FLHCNGRHHTIAL 66

Query: 136 SGRPEHGGRDRHT--CIAIRDVSKLKMILDKAGI-SYTLSKSGRP---AIFTRDPDAN-A 188
           +  P              I DV      LD AG  +  L +       + +   P     
Sbjct: 67  AAFPIPKRIHHFMLQANTIDDVGYAFDRLDAAGRITSLLGRHTNDQTLSFYADTPSPMIE 126

Query: 189 LEFT 192
           +EF 
Sbjct: 127 VEFG 130

>d1kw3b1 d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]} Length = 132

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

 Score = 41.9 bits (97), Expect = 6e-06
 Identities = 17/129 (13%), Positives = 37/129 (28%), Gaps = 25/129 (19%)

Query: 73  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 132
           +  + ++G   +++     F    +GL               A          +   P  
Sbjct: 2   IERLGYLGFAVKDVPAWDHFLTKSVGLM------AAGSAGDAALYRADQRAWRIAVQPGE 55

Query: 133 DPLSGRPEHGGRDRHTCIAIRDVSKLKMILDK---AGISYTLSKSGRP-------AIFTR 182
                         +  + + D + L+ + DK   AG+++T               +  +
Sbjct: 56  LD---------DLAYAGLEVDDAAALERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQ 106

Query: 183 DPDANALEF 191
           DP    LE 
Sbjct: 107 DPFGLPLEI 115

>d2pjsa1 d.32.1.2 (A:3-113) Uncharacterized protein Atu1953 {Agrobacterium tumefaciens [TaxId: 358]} Length = 111

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Uncharacterized protein Atu1953
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 40.4 bits (93), Expect = 2e-05
 Identities = 17/118 (14%), Positives = 29/118 (24%), Gaps = 16/118 (13%)

Query: 78  HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSG 137
              I      R+  FY +ILG+                      E    +          
Sbjct: 5   VANIATPEPARAQAFYGDILGMP------VAMDHGWIVTHASPLEAHAQVSFAREGG--- 55

Query: 138 RPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP----AIFTRDPDANALEF 191
               G       I + +  ++   + KAG+               +F RDP    +  
Sbjct: 56  ---SGTDVPDLSIEVDNFDEVHARILKAGLPIEYGPVTEAWGVQRLFLRDPFGKLINI 110

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]} Length = 172

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

 Score = 41.0 bits (95), Expect = 2e-05
 Identities = 8/57 (14%), Positives = 20/57 (35%)

Query: 71  YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLM 127
           +  ++ HHV + C +   +   +   LG  +             A L + +  +  +
Sbjct: 9   FHTLAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGSLSFL 65

>d1jifa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptomyces verticillus [TaxId: 29309]} Length = 122

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptomyces verticillus [TaxId: 29309]

 Score = 39.7 bits (91), Expect = 3e-05
 Identities = 12/115 (10%), Positives = 27/115 (23%), Gaps = 9/115 (7%)

Query: 81  ILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPE 140
           +   ++  ++ F+ + LG E +              +  G   +H+    +         
Sbjct: 11  LTAVDVPANVSFWVDTLGFEKDFGDRDFA------GVRRGDIRLHISRTEHQIVADNTSA 64

Query: 141 HGGRDRHTCIAIRDVSKLKMILDKAGISYTL---SKSGRPAIFTRDPDANALEFT 192
                    +       +                          RDP  N + FT
Sbjct: 65  WIEVTDPDALHEEWARAVSTDYADTSGPAMTPVGESPAGREFAVRDPAGNCVHFT 119

>d1ecsa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Klebsiella pneumoniae [TaxId: 573]} Length = 120

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Klebsiella pneumoniae [TaxId: 573]

 Score = 38.8 bits (89), Expect = 6e-05
 Identities = 15/115 (13%), Positives = 24/115 (20%), Gaps = 3/115 (2%)

Query: 81  ILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPE 140
           +   + + +  FY+  LG  I                 +     H    P     S    
Sbjct: 8   LPSRDFDSTAAFYER-LGFGI--VFRDAGWMILQRGDLMLEFFAHPGLDPLASWFSCCLR 64

Query: 141 HGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQVD 195
                           +          +  L   G       DPD   L   Q +
Sbjct: 65  LDDLAEFYRQCKSVGIQETSSGYPRIHAPELQGWGGTMAALVDPDGTLLRLIQNE 119

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 167

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 37.1 bits (85), Expect = 4e-04
 Identities = 9/62 (14%), Positives = 20/62 (32%), Gaps = 1/62 (1%)

Query: 71  YGVVSVHHVGILCENLERSLEFYQNILGLE-INEARPHDKLPYRGAWLWVGAEMIHLMEL 129
           + V   HH+   C +       +   LG+    ++          ++L    ++  L   
Sbjct: 8   FKVKRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGDLRFLFTA 67

Query: 130 PN 131
           P 
Sbjct: 68  PY 69

>d1sqda2 d.32.1.3 (A:181-410) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 230

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 35.9 bits (82), Expect = 0.002
 Identities = 15/128 (11%), Positives = 35/128 (27%), Gaps = 17/128 (13%)

Query: 62  PIRDSDKIDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGA------ 115
               S  +DYG+  + H       L  +L +     G         D +    +      
Sbjct: 9   EDASSFPLDYGIRRLDHAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAV 68

Query: 116 -WLWVGAEMIHLMELPNPDPLSGRPEH------GGRDRHTCIAIRD----VSKLKMILDK 164
                   ++ + E  +      + +       G   +H  +   D    + +++     
Sbjct: 69  LASNDEMVLLPINEPVHGTKRKSQIQTYLEHNEGAGLQHLALMSEDIFRTLREMRKRSSI 128

Query: 165 AGISYTLS 172
            G  +  S
Sbjct: 129 GGFDFMPS 136

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	196
d1ss4a_	149	Hypothetical protein BC1747 {Bacillus cereus (stra	99.85
d1r9ca_	130	Fosfomycin resistance protein FosX {Mesorhizobium	99.85
d2i7ra1	115	Hypotheical protein SP0731 {Streptococcus pneumoni	99.85
d1f9za_	135	Glyoxalase I (lactoylglutathione lyase) {Escherich	99.84
d1zswa1	144	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.84
d1npba_	140	Fosfomycin resistance protein A (FosA) {Serratia m	99.84
d1nkia_	134	Fosfomycin resistance protein A (FosA) {Pseudomona	99.83
d1mpya2	162	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	99.83
d1jc4a_	145	Methylmalonyl-CoA epimerase {Propionibacterium she	99.83
d1xqaa_	113	Hypothetical protein BC3580 {Bacillus cereus [TaxI	99.82
d2c21a1	139	Glyoxalase I (lactoylglutathione lyase) {Leishmani	99.82
d1qipa_	176	Glyoxalase I (lactoylglutathione lyase) {Human (Ho	99.82
d1lgta1	131	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.82
d1zswa2	170	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.81
d1kw3b1	132	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.79
d1twua_	137	Hypothetical protein YycE {Bacillus subtilis [TaxI	99.79
d1klla_	128	Mitomycin resistance protein D, MRD {Streptomyces	99.78
d1f1ua1	146	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	99.77
d2pjsa1	111	Uncharacterized protein Atu1953 {Agrobacterium tum	99.76
d1t47a1	163	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	99.76
d1f1ua2	176	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	99.74
d1sqda1	167	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	99.74
d1mpya1	145	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	99.73
d1ecsa_	120	Bleomycin resistance protein, BRP {Klebsiella pneu	99.72
d1sqia1	149	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	99.71
d1kw3b2	156	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.71
d1sp8a1	172	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	99.7
d1jifa_	122	Bleomycin resistance protein, BRP {Streptomyces ve	99.7
d1xy7a_	135	Hypothetical protein At5g48480 {Thale cress (Arabi	99.63
d1xrka_	120	Bleomycin resistance protein, BRP {Streptoalloteic	99.63
d1cjxa1	150	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	99.52
d1sp8a2	224	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	99.28
d1u6la_	137	Hypothetical protein PA1353 {Pseudomonas aeruginos	99.19
d1cjxa2	203	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	99.15
d1t47a2	199	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	99.11
d1sqia2	210	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	99.07
d1sqda2	230	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	98.98
d1u7ia_	134	Hypothetical protein PA1358 {Pseudomonas aeruginos	98.93
d1tsja_	129	Hypothetical protein MW1090 {Staphylococcus aureus	98.46
d1u69a_	156	Hypothetical protein PA2721 {Pseudomonas aeruginos	97.42
d1ss4a_	149	Hypothetical protein BC1747 {Bacillus cereus (stra	94.41
d1sqda1	167	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	94.33
d1sp8a1	172	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	94.08
d1xqaa_	113	Hypothetical protein BC3580 {Bacillus cereus [TaxI	93.34
d1jc4a_	145	Methylmalonyl-CoA epimerase {Propionibacterium she	91.13
d1cjxa1	150	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	89.76
d1k4na_	190	Hypothetical protein YecM (EC4020) {Escherichia co	89.01
d1qipa_	176	Glyoxalase I (lactoylglutathione lyase) {Human (Ho	84.62
d1klla_	128	Mitomycin resistance protein D, MRD {Streptomyces	83.83
d1lgta1	131	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	83.14
d1sqia1	149	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	83.03
d1t47a1	163	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	82.57
d1zswa2	170	Hypothetical protein BC1024 {Bacillus cereus [TaxI	81.55
d2g3aa1	137	Probable acetyltransferase Atu2258 {Agrobacterium	81.27
d1zswa1	144	Hypothetical protein BC1024 {Bacillus cereus [TaxI	81.22

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

Probab=99.85  E-value=1.1e-20  Score=137.97  Aligned_cols=123  Identities=14%  Similarity=0.227  Sum_probs=92.3

Q ss_pred             eeceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCC-----------CCCceeEEEEeC--CeEEEEEecCCCCCC---
Q 029285           72 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHD-----------KLPYRGAWLWVG--AEMIHLMELPNPDPL---  135 (196)
Q Consensus        72 ~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~-----------~~~~~~~~l~~g--~~~l~l~~~~~~~~~---  135 (196)
                      ++++++||+|.|+|+++|++||++ |||++..+.+..           ......+++...  ...++|++.......   
T Consensus         6 ~~~ri~Hv~i~v~Dle~s~~FY~~-LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~   84 (149)
T d1ss4a_           6 KLLRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHSRIELSRFLTPPTIADH   84 (149)
T ss_dssp             CEEEEEEEEEECSCHHHHHHHHHH-HTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTSSCEEEEEEEEESCCCCBC
T ss_pred             CCCEEeEEEEEeCCHHHHHHHHHH-cCCcEeeeeccceeeeeeeeccCCCceeEEEEeecccceEEEEEeeccccCcccc
Confidence            478999999999999999999999 999988754321           222345566654  347777654332221   


Q ss_pred             CCCCCCCCCceEEEEEECCHHHHHHHHHHCCCeEEeeC----CCceEEEEEcCCCCeEEEEeec
Q 029285          136 SGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQVD  195 (196)
Q Consensus       136 ~~~p~~~~~~~hi~f~v~dl~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~iEl~e~~  195 (196)
                      ...+....+..|++|.|+|+++++++|+++|+++..++    .+.+.+|++||||+.|||+|.-
T Consensus        85 ~~~~~~~~g~~hi~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~e~~  148 (149)
T d1ss4a_          85 RTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYENSYRLCYIRGVEGILIGLAEEL  148 (149)
T ss_dssp             TTCCSSSBEEEEEEEEESCHHHHHHHHHHTTCEESSCCEEETTTEEEEEEECGGGCEEEEEEEC
T ss_pred             cccCCCCcceeEEEEeechhHHHHHHHHHCCCeEccCCeECCCCeEEEEEECCCCCEEEEEEcc
Confidence            12233455788999999999999999999999885443    5568899999999999999863

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

Probab=99.85  E-value=9.8e-21  Score=135.64  Aligned_cols=116  Identities=15%  Similarity=0.243  Sum_probs=91.5

Q ss_pred             eeceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCC-CceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEE
Q 029285           72 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKL-PYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI  150 (196)
Q Consensus        72 ~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~-~~~~~~l~~g~~~l~l~~~~~~~~~~~~p~~~~~~~hi~f  150 (196)
                      ++.+++||+|.|+|++++++||+++|||++..+.+.... .....++..++..+++.......        ..+..|++|
T Consensus         1 Mi~~i~Hi~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~f   72 (130)
T d1r9ca_           1 MIEGLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGDIWVAIMQGEKLA--------ERSYNHIAF   72 (130)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHHHCCEEEEEGGGSTTCCSCEEEEEETTEEEEEEECCCCS--------SCCSCEEEE
T ss_pred             CCCcEeEEEEEeCCHHHHHHHHHHhcCCEEEEEcCCccccceeEEEEecCCEEEeeccccccc--------ccceeeeee
Confidence            367899999999999999999999999999876554332 34567888888877776643321        135578999


Q ss_pred             EEC--CHHHHHHHHHHCCCeEEeeC----CCceEEEEEcCCCCeEEEEeec
Q 029285          151 AIR--DVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQVD  195 (196)
Q Consensus       151 ~v~--dl~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~iEl~e~~  195 (196)
                      .++  |+++++++|+++|+++..++    .+++.+||+|||||.|||.+.+
T Consensus        73 ~v~~~dv~~~~~~l~~~gv~i~~~~~~~~~~~~~~~~~DPdGn~iEl~~~~  123 (130)
T d1r9ca_          73 KIDDADFDRYAERVGKLGLDMRPPRPRVEGEGRSIYFYDDDNHMFELHTGT  123 (130)
T ss_dssp             ECCGGGHHHHHHHHHHHTCCBCCCCC-----CCEEEEECTTSCEEEEECCC
T ss_pred             cccHHHHHHHHHHHHHCCCeEecCCcccCCCEEEEEEECCCCCEEEEEECC
Confidence            876  89999999999999985442    3578899999999999998754

>d2i7ra1 d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypotheical protein SP0731
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.85  E-value=8.9e-21  Score=133.85  Aligned_cols=110  Identities=16%  Similarity=0.190  Sum_probs=89.0

Q ss_pred             ceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEEEEC
Q 029285           74 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR  153 (196)
Q Consensus        74 ~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~p~~~~~~~hi~f~v~  153 (196)
                      +++.|+.|.|+|+++|++||+++||+++....+      ..+++..|+..+.|........    + ..+...+++|.|+
T Consensus         1 m~l~~i~i~V~di~~a~~FYe~~lg~~~~~~~~------~~~~~~~g~~~l~l~~~~~~~~----~-~~~~~~~~~f~v~   69 (115)
T d2i7ra1           1 MNLNQLDIIVSNVPQVCADLEHILDKKADYAND------GFAQFTIGSHCLMLSQNHLVPL----E-NFQSGIIIHIEVE   69 (115)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHHHTSCCSEEET------TEEEEEETTEEEEEESSCSSSC----C-CCCSCEEEEEECS
T ss_pred             CcceEEEEEECCHHHHHHHHHHhhCCceeeecC------CeEEEEEcCceeeeeecccCCC----C-CCCcceEEEEEEC
Confidence            468999999999999999999999999876443      2367888998888876433211    1 1223358999999


Q ss_pred             CHHHHHHHHHHCCCeEEee----CCCceEEEEEcCCCCeEEEEee
Q 029285          154 DVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  194 (196)
Q Consensus       154 dl~~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdG~~iEl~e~  194 (196)
                      |+++++++|+++|+++..+    ++|.+.++|+|||||.|||+|.
T Consensus        70 D~d~~~~~l~~~G~~i~~~~~~~~~g~~~~~~~DPdGn~ie~~~~  114 (115)
T d2i7ra1          70 DVDQNYKRLNELGIKVLHGPTVTDWGTESLLVQGPAGLVLDFYRM  114 (115)
T ss_dssp             CHHHHHHHHHHHTCCEEEEEEECTTSCEEEEEECGGGCEEEEEEC
T ss_pred             CHHHHHHHHHhhccccccceEEeeCCeEEEEEECCCCCEEEEEEe
Confidence            9999999999999988654    4677899999999999999986

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

Probab=99.84  E-value=9.6e-21  Score=135.06  Aligned_cols=118  Identities=19%  Similarity=0.320  Sum_probs=85.4

Q ss_pred             ceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCC-e---EEEEEecCCCCCCCCCCCCCCCceEEE
Q 029285           74 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA-E---MIHLMELPNPDPLSGRPEHGGRDRHTC  149 (196)
Q Consensus        74 ~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~-~---~l~l~~~~~~~~~~~~p~~~~~~~hi~  149 (196)
                      |++.|++|+|+|+++|++||+++|||++..+.+.........++.... .   ..........    ..+....+..|++
T Consensus         1 Mkl~Hv~i~V~Dl~~s~~FY~~iLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~   76 (135)
T d1f9za_           1 MRLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGV----DKYELGTAYGHIA   76 (135)
T ss_dssp             CCEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESSCTTTSCEEEEEEETTC----CCCCCCSSEEEEE
T ss_pred             CcceEEEEEcCCHHHHHHHHHHHhCCEEEeeccccccceeeeeeccceeeecccccccccccc----ccccccccceeec
Confidence            578999999999999999999999999987665444444344444331 1   1111111111    1122345678999


Q ss_pred             EEECCHHHHHHHHHHCCCeEEeeC-----CCceEEEEEcCCCCeEEEEeec
Q 029285          150 IAIRDVSKLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQVD  195 (196)
Q Consensus       150 f~v~dl~~~~~~l~~~G~~~~~~~-----~g~~~~~~~DPdG~~iEl~e~~  195 (196)
                      +.+++++.+.+++++.|..+...+     .+.+.+|++|||||.|||+|.+
T Consensus        77 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~q~~  127 (135)
T d1f9za_          77 LSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEK  127 (135)
T ss_dssp             EECSCHHHHHHHHHHTTCEEEEEEEECTTSCCEEEEEECTTSCEEEEEEC-
T ss_pred             cchHHHHHHHHHHHHcCCCeecCCccccCCCeEEEEEECCCCCEEEEEECC
Confidence            999999999999999999876542     3467889999999999999975

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.84  E-value=3.2e-20  Score=135.25  Aligned_cols=123  Identities=17%  Similarity=0.249  Sum_probs=87.9

Q ss_pred             ceeceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCC-ceeEEEEeC----CeEEEEEecCCCCCCCCCCCCCCCc
Q 029285           71 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLP-YRGAWLWVG----AEMIHLMELPNPDPLSGRPEHGGRD  145 (196)
Q Consensus        71 ~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~-~~~~~l~~g----~~~l~l~~~~~~~~~~~~p~~~~~~  145 (196)
                      ++|.+++||+|.|+|+++|++||+++|||++..+....+.. ....++...    ...+.+...+....  ..+ ..+++
T Consensus         2 ~~i~gl~Hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~-~~~~~   78 (144)
T d1zswa1           2 YEIKGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFEIPLVGR--TYR-GTNAI   78 (144)
T ss_dssp             SCCCSEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEETTEEEEEEEEEESTTCCTTSEEEEEECTTCCB--CBC-CBSEE
T ss_pred             CcccceeeEEEEeCCHHHHHHHHHHHhCCeeEeeeccccCCceeEEEecccccceeeEEeecccccccC--Ccc-CCCce
Confidence            45789999999999999999999999999998765433221 112222222    12444444433221  111 12357


Q ss_pred             eEEEEEECC---HHHHHHHHHHCCCeEEee--CCCceEEEEEcCCCCeEEEEeecC
Q 029285          146 RHTCIAIRD---VSKLKMILDKAGISYTLS--KSGRPAIFTRDPDANALEFTQVDG  196 (196)
Q Consensus       146 ~hi~f~v~d---l~~~~~~l~~~G~~~~~~--~~g~~~~~~~DPdG~~iEl~e~~~  196 (196)
                      +|++|.|++   ++++.++|++.|+.+...  ..+.+.+||+|||||.|||++.++
T Consensus        79 ~Hiaf~v~~~~~l~~~~~~l~~~gv~~~~~~~~~~~~~~yf~DPdG~~iEl~~~~~  134 (144)
T d1zswa1          79 TRIGLLVPSEDSLHYWKERFEKFDVKHSEMTTYANRPALQFEDAEGLRLVLLVSNG  134 (144)
T ss_dssp             EEEEEEESCHHHHHHHHHHHHHTTCEECCSEEETTEEEEEEECTTCCEEEEEECTT
T ss_pred             eEEEEecCCchhHHHHhhhhhccceeeeCccccCCeEEEEEECCCCCEEEEEEeCC
Confidence            899999997   677889999999988543  357889999999999999998753

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

Probab=99.84  E-value=8.4e-20  Score=132.49  Aligned_cols=114  Identities=23%  Similarity=0.379  Sum_probs=90.5

Q ss_pred             eeceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEEE
Q 029285           72 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIA  151 (196)
Q Consensus        72 ~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~p~~~~~~~hi~f~  151 (196)
                      ++.+++||+|.|+|++++++||+++|||++.....      ...++..++..+.+.........   +.......|++|.
T Consensus         1 Mi~~l~Hi~l~v~d~~~~~~FY~~vLG~~~~~~~~------~~~~~~~~~~~~~l~~~~~~~~~---~~~~~~~~h~~~~   71 (140)
T d1npba_           1 MLQSLNHLTLAVSDLQKSVTFWHELLGLTLHARWN------TGAYLTCGDLWVCLSYDEARQYV---PPQESDYTHYAFT   71 (140)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHTTSCCEEEEEET------TEEEEEETTEEEEEEECTTCCCC---CGGGSCSCEEEEE
T ss_pred             CCCcEeEEEEEeCCHHHHHHHHHHHhCCEEEEEec------cccccccccccceeecccccccC---CCcCCccceeeee
Confidence            36799999999999999999999999999987543      23567778777777655433221   2233456788998


Q ss_pred             EC--CHHHHHHHHHHCCCeEEeeC-CCceEEEEEcCCCCeEEEEee
Q 029285          152 IR--DVSKLKMILDKAGISYTLSK-SGRPAIFTRDPDANALEFTQV  194 (196)
Q Consensus       152 v~--dl~~~~~~l~~~G~~~~~~~-~g~~~~~~~DPdG~~iEl~e~  194 (196)
                      ++  |+++++++|+++|+++...+ .+++.+||+|||||.|||.+.
T Consensus        72 ~~~~d~~~~~~~l~~~Gv~~~~~~~~~~~~~~~~DPdGn~iEi~~~  117 (140)
T d1npba_          72 VAEEDFEPLSQRLEQAGVTIWKQNKSEGASFYFLDPDGHKLELHVG  117 (140)
T ss_dssp             CCHHHHHHHHHHHHHTTCCEEECCCSSSEEEEEECTTCCEEEEEEC
T ss_pred             chHHHHHHHHHHHHHCCCeEeecCCCCceEEEEECCCCCEEEEEEC
Confidence            85  89999999999999987654 568999999999999999875

>d1nkia_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.83  E-value=1.9e-19  Score=129.65  Aligned_cols=111  Identities=22%  Similarity=0.358  Sum_probs=88.3

Q ss_pred             eeceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEEE
Q 029285           72 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIA  151 (196)
Q Consensus        72 ~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~p~~~~~~~hi~f~  151 (196)
                      ++.+++||+|.|+|++++++||+++||+++..+.+      ...++..++..++..........      ..+..|++|.
T Consensus         1 mi~~i~Hv~l~v~d~~~~~~FY~~~lG~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~------~~~~~h~~~~   68 (134)
T d1nkia_           1 MLTGLNHLTLAVADLPASIAFYRDLLGFRLEARWD------QGAYLELGSLWLCLSREPQYGGP------AADYTHYAFG   68 (134)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET------TEEEEEETTEEEEEEECTTCCCC------CSSSCEEEEE
T ss_pred             CCCcEeEEEEEeCCHHHHHHHHHHhhCCeEEEecc------ceeeeecCCeEEEEeeecccccc------ccccccchhc
Confidence            36789999999999999999999999999987654      24678888887777665443221      1244566666


Q ss_pred             E--CCHHHHHHHHHHCCCeEEeeC-CCceEEEEEcCCCCeEEEEee
Q 029285          152 I--RDVSKLKMILDKAGISYTLSK-SGRPAIFTRDPDANALEFTQV  194 (196)
Q Consensus       152 v--~dl~~~~~~l~~~G~~~~~~~-~g~~~~~~~DPdG~~iEl~e~  194 (196)
                      +  +|+++++++|+++|+++...+ .+++.+||+|||||.|||+..
T Consensus        69 ~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~f~DPdGn~iEl~~~  114 (134)
T d1nkia_          69 IAAADFARFAAQLRAHGVREWKQNRSEGDSFYFLDPDGHRLEAHVG  114 (134)
T ss_dssp             ECHHHHHHHHHHHHHTTCCEEECCCSSSCEEEEECTTCCEEEEESC
T ss_pred             cccchHHHHHHHHHHCCCcCccCCCcceeEEEEECCCCCEEEEEEC
Confidence            6  599999999999999987665 447889999999999999764

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=99.83  E-value=5.4e-20  Score=137.34  Aligned_cols=116  Identities=15%  Similarity=0.239  Sum_probs=87.1

Q ss_pred             ceeceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEE
Q 029285           71 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI  150 (196)
Q Consensus        71 ~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~p~~~~~~~hi~f  150 (196)
                      |..++++||+|+|+|++++++||+++|||++..+...........|+..+...........+        ..++..|++|
T Consensus         1 m~~~rldHv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~h~~~   72 (162)
T d1mpya2           1 MAAVRFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTKAHDVAFIHHP--------EKGRLHHVSF   72 (162)
T ss_dssp             TCCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEECTTCCEEEEEEESSSBSCSEEEEECS--------SSSEEEEEEE
T ss_pred             CCcccccEEEEECCCHHHHHHHHHHccCCEEEEEEccccccceeeeeecccccccccccccC--------CCCccceeEE
Confidence            45678999999999999999999999999998876665555555666655432222211111        1236789999


Q ss_pred             EECCHH---HHHHHHHHCCCeEEeeC-----CCceEEEEEcCCCCeEEEEee
Q 029285          151 AIRDVS---KLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQV  194 (196)
Q Consensus       151 ~v~dl~---~~~~~l~~~G~~~~~~~-----~g~~~~~~~DPdG~~iEl~e~  194 (196)
                      .+.+++   +++++|++.|+++...+     .+.+.+|++|||||.|||++.
T Consensus        73 ~~~~~~~~~~~~~~L~~~gv~~~~~p~~~~~g~~~~~y~~DPdGn~iEl~~~  124 (162)
T d1mpya2          73 HLETWEDLLRAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSGNRNEVFCG  124 (162)
T ss_dssp             ECSCHHHHHHHHHHHHHHTCCEEEEEEECSSTTCEEEEEECTTSCEEEEEEC
T ss_pred             EEeeehhhhhHHHHHHHcCCccccCccccCCCCeEEEEEECCCCCEEEEEEC
Confidence            998666   67889999999886543     235889999999999999874

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

Probab=99.83  E-value=1.4e-20  Score=136.45  Aligned_cols=123  Identities=14%  Similarity=0.249  Sum_probs=92.9

Q ss_pred             eceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEE------eCCeEEEEEecCCCCCCCC----CCCCC
Q 029285           73 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLW------VGAEMIHLMELPNPDPLSG----RPEHG  142 (196)
Q Consensus        73 i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~------~g~~~l~l~~~~~~~~~~~----~p~~~  142 (196)
                      +++++||+|.|+|+++|++||+++||+++.............++..      .++..+++++.........    .....
T Consensus         5 ~~~i~Hi~i~v~Dl~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~~~~~~~~~   84 (145)
T d1jc4a_           5 FICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLNDESTVAKWLAKHNGR   84 (145)
T ss_dssp             CSEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEESSTTSHHHHHHHHTTTC
T ss_pred             ceEEeEEEEEeCCHHHHHHHHHhhccCceeeeeeecccceEEEeeeceeccccccchhhhhhhhcccCcccccccccCCC
Confidence            7899999999999999999999999999887655444444443332      3456888887654432211    12345


Q ss_pred             CCceEEEEEECCHHHHHHHHHHCCCeEEeeC-----CCceEEEE--EcCCCCeEEEEeec
Q 029285          143 GRDRHTCIAIRDVSKLKMILDKAGISYTLSK-----SGRPAIFT--RDPDANALEFTQVD  195 (196)
Q Consensus       143 ~~~~hi~f~v~dl~~~~~~l~~~G~~~~~~~-----~g~~~~~~--~DPdG~~iEl~e~~  195 (196)
                      .++.|+||.|+|+++++++|+++|+++..++     .|.+.+|+  +||+|+.|||.|.+
T Consensus        85 ~g~~Hia~~v~di~~~~~~l~~~Gv~~~~~~~~~~~~g~~~~f~~p~dp~G~~iEl~e~p  144 (145)
T d1jc4a_          85 AGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGGNRINFMHPKSGKGVLIELTQYP  144 (145)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHHTCCBSCSSCEECSSSCEEEEBCGGGGTTSCEEEEECC
T ss_pred             CcceEEEEecchHHHHHHHHHHCCCEEeCCCceECCCCCEEEEEeccCCCCeEEEEEECC
Confidence            6789999999999999999999999985332     34455555  69999999999975

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

Probab=99.82  E-value=5.4e-20  Score=128.37  Aligned_cols=107  Identities=16%  Similarity=0.226  Sum_probs=81.1

Q ss_pred             ceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeC-CeEEEEEecCCCCCCCCCCCCCCCceEEEEEE
Q 029285           74 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-AEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  152 (196)
Q Consensus        74 ~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g-~~~l~l~~~~~~~~~~~~p~~~~~~~hi~f~v  152 (196)
                      ++++||.|.|+|++++++||+++|||++..+.+.     ...++..+ +..+.+.......        .++..|++|.|
T Consensus         2 m~i~Hi~l~v~Dl~~a~~FY~~~lG~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~--------~~~~~h~~f~v   68 (113)
T d1xqaa_           2 MGIKHLNLTVADVVAAREFLEKYFGLTCSGTRGN-----AFAVMRDNDGFILTLMKGKEVQ--------YPKTFHVGFPQ   68 (113)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHHHCCEEEEEETT-----TEEEEECTTCCEEEEEECSSCC--------CCTTCCEEEEC
T ss_pred             CcccEEEEEeCCHHHHHHHHHHhhCCEEEEeecC-----cceeeeecceeeeeeeeeeccc--------ccccceeeeee
Confidence            5789999999999999999999999999876532     12333333 3456665543322        13567999999


Q ss_pred             CC---HHHHHHHHHHCCCeEEeeC-CCceEEEEEcCCCCeEEEEe
Q 029285          153 RD---VSKLKMILDKAGISYTLSK-SGRPAIFTRDPDANALEFTQ  193 (196)
Q Consensus       153 ~d---l~~~~~~l~~~G~~~~~~~-~g~~~~~~~DPdG~~iEl~e  193 (196)
                      +|   ++++++++++.|+++...+ .+++.+||+|||||.|||..
T Consensus        69 ~~~~~v~~~~~~l~~~G~~~~~~~~~~~~~~~~~DPdG~~iEi~c  113 (113)
T d1xqaa_          69 ESEEQVDKINQRLKEDGFLVEPPKHAHAYTFYVEAPGGFTIEVMC  113 (113)
T ss_dssp             SSHHHHHHHHHHHHHTTCCCCCCEEC-CEEEEEEETTTEEEEEEC
T ss_pred             ccccchhhhhhhHHHcCCccccCCCCceEEEEEECCCCCEEEEEC
Confidence            86   6678899999999876554 45789999999999999963

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

Probab=99.82  E-value=5.7e-20  Score=131.23  Aligned_cols=118  Identities=21%  Similarity=0.275  Sum_probs=86.6

Q ss_pred             ceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCe---EEEEEecCCCCCCCCCCCCCCCceEEEE
Q 029285           74 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE---MIHLMELPNPDPLSGRPEHGGRDRHTCI  150 (196)
Q Consensus        74 ~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~---~l~l~~~~~~~~~~~~p~~~~~~~hi~f  150 (196)
                      .+++||+|.|+|+++|++||+++|||++..+.+.........+......   ...........   ..........++++
T Consensus         2 ~r~~Hv~l~V~Dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~   78 (139)
T d2c21a1           2 RRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGV---TSYKHDEAYGHIAI   78 (139)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTTTSCEEEEEEETTC---CCCCCCSSEEEEEE
T ss_pred             CceEEEEEEeCCHHHHHHHHHHHhCCEeeccccccccceeeeeecccccccccccccccccCc---ccccCCCccceeee
Confidence            4799999999999999999999999999876654343333333333221   11111111111   11223345678999


Q ss_pred             EECCHHHHHHHHHHCCCeEEeeCCCceEEEEEcCCCCeEEEEee
Q 029285          151 AIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQV  194 (196)
Q Consensus       151 ~v~dl~~~~~~l~~~G~~~~~~~~g~~~~~~~DPdG~~iEl~e~  194 (196)
                      .++++.++++.+...++++...+.+.+.+||+|||||.|||++.
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~DPdGn~iEl~~~  122 (139)
T d2c21a1          79 GVEDVKELVADMRKHDVPIDYEDESGFMAFVVDPDGYYIELLNE  122 (139)
T ss_dssp             EESCHHHHHHHHHHTTCCEEEECSSSSEEEEECTTSCEEEEEEH
T ss_pred             ehhhHHHHHHHHHHcCCceeeCCCCcEEEEEECCCCCEEEEEEC
Confidence            99999999999999999998888889999999999999999984

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=2.4e-19  Score=134.83  Aligned_cols=124  Identities=16%  Similarity=0.221  Sum_probs=89.5

Q ss_pred             eeceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCC-------------------eEEEEEecCCC
Q 029285           72 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA-------------------EMIHLMELPNP  132 (196)
Q Consensus        72 ~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~-------------------~~l~l~~~~~~  132 (196)
                      ...+++|++|+|+|+++|++||+++|||++.............+|+..+.                   ....+......
T Consensus        20 ~~~~l~Hi~l~V~Dl~~si~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   99 (176)
T d1qipa_          20 KDFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWGT   99 (176)
T ss_dssp             TTCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESCCGGGSCSSHHHHHHHHTTSSSEEEEEEETTG
T ss_pred             cceEEeEEEEEeCCHHHHHHHHHHhhCCeEeeeecccCCceEEEEeecCCccccccccccccccccccccceeEEEeecc
Confidence            34579999999999999999999999999887665555555555554421                   12222222211


Q ss_pred             --CCCC---CCCCCCCCceEEEEEECCHHHHHHHHHHCCCeEEeeCC---CceEEEEEcCCCCeEEEEeec
Q 029285          133 --DPLS---GRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKS---GRPAIFTRDPDANALEFTQVD  195 (196)
Q Consensus       133 --~~~~---~~p~~~~~~~hi~f~v~dl~~~~~~l~~~G~~~~~~~~---g~~~~~~~DPdG~~iEl~e~~  195 (196)
                        ....   .......++.|+|+.++|+++++++|+++|+++...+.   +...+||+|||||.|||+|..
T Consensus       100 ~~~~~~~~~~~~~~~~g~~h~~~~~~d~~~~~~~l~~~Gv~~~~~p~~g~~~~~~f~~DPdG~~IElvq~~  170 (176)
T d1qipa_         100 EDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILNPN  170 (176)
T ss_dssp             GGCTTCCCBCSSSSSCBEEEEEEECSCHHHHHHHHHHTTCEEEECTTSSSSTTCEEEECTTCCEEEEECTT
T ss_pred             ccccCcCccCCCCCccceeEEEeeHHHHHHHHHHHHHCCCEEeeCCccCCceEEEEEECCCCCEEEEEeCC
Confidence              1111   11123457789999999999999999999999987652   356689999999999999965

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

Probab=99.82  E-value=1.3e-19  Score=130.69  Aligned_cols=105  Identities=17%  Similarity=0.165  Sum_probs=84.0

Q ss_pred             eeceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCe--EEEEEecCCCCCCCCCCCCCCCceEEE
Q 029285           72 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHTC  149 (196)
Q Consensus        72 ~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~--~l~l~~~~~~~~~~~~p~~~~~~~hi~  149 (196)
                      +|.+++||+|.|+|++++++||+++|||++..+.+      ..+|++.++.  .+.+...+           ..+..|++
T Consensus         1 ~I~~l~hv~i~V~Dl~~s~~FY~~vLG~~~~~~~~------~~~~l~~~~~~~~l~l~~~~-----------~~~~~h~~   63 (131)
T d1lgta1           1 SIRSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTD------NGDLFRIDSRAWRIAVQQGE-----------VDDLAFAG   63 (131)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET------TEEEEESSSBSCSEEEEECT-----------TCEEEEEE
T ss_pred             CcccccEEEEEeCCHHHHHHHHHHhhCCceeecCC------cceEEeecCCceEEEEecCC-----------CCCceEEE
Confidence            37789999999999999999999999999987643      3578887764  34444321           13678999


Q ss_pred             EEEC---CHHHHHHHHHHCCCeEEeeC-------CCceEEEEEcCCCCeEEEEe
Q 029285          150 IAIR---DVSKLKMILDKAGISYTLSK-------SGRPAIFTRDPDANALEFTQ  193 (196)
Q Consensus       150 f~v~---dl~~~~~~l~~~G~~~~~~~-------~g~~~~~~~DPdG~~iEl~e  193 (196)
                      |.|.   +++++.++|+++|+++...+       .+.+.+||+|||||.|||+.
T Consensus        64 f~v~~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~f~DPdGn~iE~~~  117 (131)
T d1lgta1          64 YEVADAAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITFADPFGLPLEIYY  117 (131)
T ss_dssp             EEESSHHHHHHHHHHHHHTTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEE
T ss_pred             EEEccHHHHHHHHHHHHHcCCceEECCccccccCCceEEEEEECCCCCEEEEEe
Confidence            9997   56678999999999997653       34678999999999999975

>d1zswa2 d.32.1.10 (A:145-314) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.81  E-value=2.7e-20  Score=140.31  Aligned_cols=115  Identities=13%  Similarity=0.211  Sum_probs=83.5

Q ss_pred             eeceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCe---EEEEEecCCCCCCCCCCCCCCCceEE
Q 029285           72 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE---MIHLMELPNPDPLSGRPEHGGRDRHT  148 (196)
Q Consensus        72 ~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~---~l~l~~~~~~~~~~~~p~~~~~~~hi  148 (196)
                      .|++++||+|.|.|++++++||+++|||++..+.+.     ...|...++.   .+.+.....+.   ..+. .++++||
T Consensus         9 ~I~Gl~HV~L~V~Dle~s~~FY~~vLG~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~l~Hi   79 (170)
T d1zswa2           9 QIQGMGSVELTVRRLDKMASTLTEIFGYTEVSRNDQ-----EAIFQSIKGEAFGEIVVKYLDGPT---EKPG-RGSIHHL   79 (170)
T ss_dssp             SCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEECSS-----EEEEESSTTCSTTCEEEEECCSSB---CBCC-BTCEEEE
T ss_pred             HhCCeeeEEEEeCCHHHHHHHHHHHhCCEEEeecCc-----eEEEEeccCccceEEEeccccccc---cccC-ccccceE
Confidence            478999999999999999999999999999986431     2233333322   22222222221   1222 2367899


Q ss_pred             EEEECC---HHHHHHHHHHCCCeEEee--CCCceEEEEEcCCCCeEEEEeec
Q 029285          149 CIAIRD---VSKLKMILDKAGISYTLS--KSGRPAIFTRDPDANALEFTQVD  195 (196)
Q Consensus       149 ~f~v~d---l~~~~~~l~~~G~~~~~~--~~g~~~~~~~DPdG~~iEl~e~~  195 (196)
                      +|.|+|   ++++++++++.|+++...  ..+++.+||+|||||.|||...+
T Consensus        80 Af~V~~~~~l~~~~~~l~~~G~~~~~~~~~~~~~s~Yf~DPdG~~iEl~t~~  131 (170)
T d1zswa2          80 AIRVKNDAELAYWEEQVKQRGFHSSGIIDRFYFKSLYFRESNGILFEIATDG  131 (170)
T ss_dssp             EEEESSHHHHHHHHHHHHHTTCCCCCCEECSSEEEEEEECTTCCEEEEEEEE
T ss_pred             EEEeCChHHHHHHHHHHHhcCCCccccccCCCEEEEEEECCCCcEEEEEECC
Confidence            999985   677899999999988643  34578899999999999998753

>d1kw3b1 d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=99.79  E-value=5.8e-19  Score=127.39  Aligned_cols=106  Identities=13%  Similarity=0.150  Sum_probs=83.5

Q ss_pred             eceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEEEE
Q 029285           73 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  152 (196)
Q Consensus        73 i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~p~~~~~~~hi~f~v  152 (196)
                      |.+++||+|.|+|++++++||+++|||++..+.+      ..+|++.++....+.....+         ..+..|++|.|
T Consensus         2 i~~L~hv~i~v~Dl~~s~~FY~~vLG~~~~~~~~------~~~~l~~~~~~~~l~~~~~~---------~~~~~h~~f~v   66 (132)
T d1kw3b1           2 IERLGYLGFAVKDVPAWDHFLTKSVGLMAAGSAG------DAALYRADQRAWRIAVQPGE---------LDDLAYAGLEV   66 (132)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET------TEEEEESSSBSCSEEEEECT---------TCEEEEEEEEC
T ss_pred             cccccEEEEEeCCHHHHHHHHHHHhCCceecccc------ceeeeeeeecceeeeeeccC---------CCCceEEEEEe
Confidence            6799999999999999999999999999987643      35788887653222221111         13678999999


Q ss_pred             C---CHHHHHHHHHHCCCeEEeeC-------CCceEEEEEcCCCCeEEEEe
Q 029285          153 R---DVSKLKMILDKAGISYTLSK-------SGRPAIFTRDPDANALEFTQ  193 (196)
Q Consensus       153 ~---dl~~~~~~l~~~G~~~~~~~-------~g~~~~~~~DPdG~~iEl~e  193 (196)
                      .   +++++.++++++|+++...+       .....+||+|||||.|||+.
T Consensus        67 ~~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~DPdGn~iE~~~  117 (132)
T d1kw3b1          67 DDAAALERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQDPFGLPLEIYY  117 (132)
T ss_dssp             SSHHHHHHHHHHHHHHTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEE
T ss_pred             ccHHHHHHHHHHHHHcCCCceecCccccccCCcceEEEEECCCCCEEEEEE
Confidence            6   57778999999999987653       23578999999999999985

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

Probab=99.79  E-value=2.6e-19  Score=129.64  Aligned_cols=113  Identities=14%  Similarity=0.170  Sum_probs=81.8

Q ss_pred             EEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCeEEE--EEecCCCCCCCCCCCCCCCceEEEEEECC-
Q 029285           78 HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIH--LMELPNPDPLSGRPEHGGRDRHTCIAIRD-  154 (196)
Q Consensus        78 hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~l~--l~~~~~~~~~~~~p~~~~~~~hi~f~v~d-  154 (196)
                      .|++.|.|+++|++||+++|||++..+.+.. ..+..+|+..++..++  +........    +..++...|++|.|++ 
T Consensus        12 RVa~pv~Dle~s~~FY~~vLG~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~----~~~~~~~~hlaf~v~~~   86 (137)
T d1twua_          12 RIARPTGQLDEIIRFYEEGLCLKRIGEFSQH-NGYDGVMFGLPHADYHLEFTQYEGGST----APVPHPDSLLVFYVPNA   86 (137)
T ss_dssp             EEEEECSCHHHHHHHHTTTSCCCEEEEEEEE-TTEEEEEEESSSSSEEEEEEEETTCCC----CCCCCTTCEEEEECCCH
T ss_pred             EEecccCCHHHHHHHHHhccCCceeeeeccc-cceeEEEecCCCCceeeeccccccccc----ccccccCceEEEEeCCH
Confidence            3444468999999999999999998765432 2356677777665444  433332221    2233456799999886 


Q ss_pred             --HHHHHHHHHHCCCeEEeeC---CCceEEEEEcCCCCeEEEEeec
Q 029285          155 --VSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQVD  195 (196)
Q Consensus       155 --l~~~~~~l~~~G~~~~~~~---~g~~~~~~~DPdG~~iEl~e~~  195 (196)
                        +++++++|+++|+++..++   ++.+.+||+|||||+|||....
T Consensus        87 ~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~f~DPDG~~Iel~~~~  132 (137)
T d1twua_          87 VELAAITSKLKHMGYQEVESENPYWSNGGVTIEDPDGWRIVFMNSK  132 (137)
T ss_dssp             HHHHHHHHHHHHTTCCEECCSSHHHHSSEEEEECTTCCEEEEESSC
T ss_pred             HHHHHHHHHHHHCCCeEeCCCCCCCCceEEEEECCCCCEEEEEcCC
Confidence              7778899999999987654   3568899999999999998764

>d1klla_ d.32.1.2 (A:) Mitomycin resistance protein D, MRD {Streptomyces lavendulae [TaxId: 1914]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Mitomycin resistance protein D, MRD
species: Streptomyces lavendulae [TaxId: 1914]

Probab=99.78  E-value=5.4e-19  Score=126.23  Aligned_cols=117  Identities=19%  Similarity=0.242  Sum_probs=83.1

Q ss_pred             eeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeC-CeEEEEEecCCC--CCCCCCCCCCCCceEEEEE
Q 029285           75 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-AEMIHLMELPNP--DPLSGRPEHGGRDRHTCIA  151 (196)
Q Consensus        75 ~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g-~~~l~l~~~~~~--~~~~~~p~~~~~~~hi~f~  151 (196)
                      +++||+|.|+|+++|++||++ |||.+......+.    .+++..+ +..+.+......  ......+...++..|++|.
T Consensus         2 ri~hv~l~V~D~~~s~~FY~~-Lg~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~   76 (128)
T d1klla_           2 RISLFAVVVEDMAKSMEFYRK-MGVEIPAEADSAP----HTEAVLDGGIRLAWDTVETVRSYDPEWQAPTGGHRFAIAFE   76 (128)
T ss_dssp             CCCEEEEEESCHHHHHHHHHH-TTCCCCTTGGGCS----EEEEECGGGCEEEEEEHHHHHHHCTTCCCCCSSCSCEEEEE
T ss_pred             eEeEEEEEcCCHHHHHHHHHH-hCCcccccccccc----ceeeeccceeeeeecccccccccCCCCCCCccccceeEeee
Confidence            689999999999999999987 8998776544322    2334443 445555542211  0111112233455799999


Q ss_pred             ECC---HHHHHHHHHHCCCeEEeeC----CCceEEEEEcCCCCeEEEEeecC
Q 029285          152 IRD---VSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQVDG  196 (196)
Q Consensus       152 v~d---l~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~iEl~e~~~  196 (196)
                      |++   +++++++|+++|+++..++    +|.+.+|++|||||.|||+++-|
T Consensus        77 v~~~~~l~~~~~~l~~~G~~~~~~p~~~~~G~~~~~~~DPdG~~iel~~p~p  128 (128)
T d1klla_          77 FPDTASVDKKYAELVDAGYEGHLKPWNAVWGQRYAIVKDPDGNVVDLFAPLP  128 (128)
T ss_dssp             CSSHHHHHHHHHHHHHTTCEEEEEEEECTTSEEEEEEECTTSCEEEEEEECC
T ss_pred             eccchhhHHHHHHHHhccCccccCCeEcCCCcEEEEEECCCCCEEEEEecCC
Confidence            986   6678999999999986543    56799999999999999998754

>d1f1ua1 d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=99.77  E-value=1e-17  Score=122.51  Aligned_cols=108  Identities=20%  Similarity=0.246  Sum_probs=82.1

Q ss_pred             CCceeceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCe----EEEEEecCCCCCCCCCCCCCCC
Q 029285           69 IDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE----MIHLMELPNPDPLSGRPEHGGR  144 (196)
Q Consensus        69 ~~~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~----~l~l~~~~~~~~~~~~p~~~~~  144 (196)
                      ++..+++++||.|.|+|++++++||+++|||++....+      ...++...+.    .+.+... .          ..+
T Consensus        10 p~~~i~rl~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~-~----------~~~   72 (146)
T d1f1ua1          10 PAPDIVRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDE------NTIYLRSLEEFIHHNLVLRQG-P----------IAA   72 (146)
T ss_dssp             CCCCEEEEEEEEEEESCHHHHHHHHTTTTCCEEEEECS------SEEEEECTTCCSSCSEEEEEC-S----------SCE
T ss_pred             CCCCCcEEeEEEEEeCCHHHHHHHHHhccCcEEEeecC------Cceeeecccccccceeecccc-C----------CCC
Confidence            45568999999999999999999999999999997543      1244443322    1112111 1          136


Q ss_pred             ceEEEEEEC---CHHHHHHHHHHCCCeEEeeC----CC-ceEEEEEcCCCCeEEEEe
Q 029285          145 DRHTCIAIR---DVSKLKMILDKAGISYTLSK----SG-RPAIFTRDPDANALEFTQ  193 (196)
Q Consensus       145 ~~hi~f~v~---dl~~~~~~l~~~G~~~~~~~----~g-~~~~~~~DPdG~~iEl~e  193 (196)
                      ..|++|.+.   |+++++++|+++|+++...+    .| ++.+||+|||||.|||++
T Consensus        73 ~~h~~~~~~~~~dl~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DPdG~~iEl~~  129 (146)
T d1f1ua1          73 VAAFAYRVKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRVEDPLGFPYEFFY  129 (146)
T ss_dssp             EEEEEEEESSHHHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEEC
T ss_pred             CceeeEeeccchhHHHHHHHHHHcCCceeeccccccCCceEEEEEECCCCcEEEEEE
Confidence            789999997   67888999999999987653    23 588999999999999986

>d2pjsa1 d.32.1.2 (A:3-113) Uncharacterized protein Atu1953 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Uncharacterized protein Atu1953
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.76  E-value=2.4e-18  Score=119.22  Aligned_cols=105  Identities=18%  Similarity=0.225  Sum_probs=77.5

Q ss_pred             eeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEEEECC
Q 029285           75 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD  154 (196)
Q Consensus        75 ~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~p~~~~~~~hi~f~v~d  154 (196)
                      ++ +..|.|+|+++|++||+++|||++....+.      ...+..++....+........      .+....|+.|.++|
T Consensus         3 ri-~~~l~v~d~~~a~~FY~~~lG~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~d   69 (111)
T d2pjsa1           3 RV-VANIATPEPARAQAFYGDILGMPVAMDHGW------IVTHASPLEAHAQVSFAREGG------SGTDVPDLSIEVDN   69 (111)
T ss_dssp             EE-EEEEECSCGGGGHHHHTTTTCCCEEEECSS------EEEEEEEEEEEEEEEEESSSB------TTBCCCSEEEEESC
T ss_pred             EE-EEEEEeCCHHHHHHHHHHhhCCceeecccc------eeEeccccccceeeecccccC------CCCceeEEEEEecC
Confidence            44 688999999999999999999999875431      233444444333333222211      12344689999999


Q ss_pred             HHHHHHHHHHCCCeEEee----CCCceEEEEEcCCCCeEEEE
Q 029285          155 VSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFT  192 (196)
Q Consensus       155 l~~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdG~~iEl~  192 (196)
                      +++++++++++|+++..+    ++|.+.+|++|||||.|||+
T Consensus        70 vd~~~~~l~~~g~~~~~~p~~~~~g~~~~~~~DP~Gn~iei~  111 (111)
T d2pjsa1          70 FDEVHARILKAGLPIEYGPVTEAWGVQRLFLRDPFGKLINIL  111 (111)
T ss_dssp             HHHHHHHHHHTTCCCSEEEEECTTSCEEEEEECTTSCEEEEE
T ss_pred             HHHHHHHHHhhccccccCCeEcCCCcEEEEEECCCCCEEEeC
Confidence            999999999999987543    46779999999999999985

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=99.76  E-value=2.6e-18  Score=128.00  Aligned_cols=127  Identities=13%  Similarity=0.121  Sum_probs=97.6

Q ss_pred             CCceeceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCC--CceeEEEEeCCeEEEEEecCCCCCCCC-----C-CC
Q 029285           69 IDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKL--PYRGAWLWVGAEMIHLMELPNPDPLSG-----R-PE  140 (196)
Q Consensus        69 ~~~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~--~~~~~~l~~g~~~l~l~~~~~~~~~~~-----~-p~  140 (196)
                      +++.+.+++||+|+|.|+++|++||+++|||+++.....+..  ......+..++..++|.....+.....     . ..
T Consensus         1 ~p~~i~~idHv~i~V~D~~~a~~fY~~~lGf~~v~~~~~~~~~~~~~~~~l~~~~~~i~l~~~~~~~~~~~~~~~~~~~~   80 (163)
T d1t47a1           1 DPFPVKGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSARFVLTSVIKPATPWGHFLADHVAE   80 (163)
T ss_dssp             CCSCCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEEESSCCSHHHHHHHHHHHH
T ss_pred             CCCCCceEeEEEEEeCCHHHHHHHHHHHhCCeEEeeecccccceeEEEEEEecCCEEEEEeccCCCCCccccccchhhhc
Confidence            367789999999999999999999999999999876543332  223455667888888887655432111     0 12


Q ss_pred             CCCCceEEEEEECCHHHHHHHHHHCCCeEEeeC-----C-C-ceEEEEEcCCCCeEEEEeec
Q 029285          141 HGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK-----S-G-RPAIFTRDPDANALEFTQVD  195 (196)
Q Consensus       141 ~~~~~~hi~f~v~dl~~~~~~l~~~G~~~~~~~-----~-g-~~~~~~~DPdG~~iEl~e~~  195 (196)
                      .+.+..||||.|+|+++++++|+++|+++..++     . | ...+++++|+|..++|+|..
T Consensus        81 ~g~G~~hiaf~VdDid~a~~~l~~~Ga~~~~~P~~~~d~~G~v~~a~I~~~g~~~~~lier~  142 (163)
T d1t47a1          81 HGDGVVDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEHGTVVLAAIATYGKTRHTLVDRT  142 (163)
T ss_dssp             HCSEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEE
T ss_pred             CCCceEEEEEeeCCHHHHHHHHHHCCCeEEecCcceeCCCCEEEEEEEecCCCceEEEEecc
Confidence            456889999999999999999999999986553     1 2 36689999999999998853

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=99.74  E-value=9.7e-18  Score=126.74  Aligned_cols=112  Identities=17%  Similarity=0.228  Sum_probs=82.7

Q ss_pred             eceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEEEE
Q 029285           73 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  152 (196)
Q Consensus        73 i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~p~~~~~~~hi~f~v  152 (196)
                      +++++||+|.|+|++++++|| ++|||++..+..........+|+..++....+.....+         .++.+|++|.+
T Consensus         3 i~rl~Hv~l~v~Dle~s~~FY-e~LGf~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---------~~~~~H~~f~~   72 (176)
T d1f1ua2           3 LVRLDHFNQVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQTVHDTALTGGN---------GPRMHHVAFAT   72 (176)
T ss_dssp             CCEEEEEEEEESCHHHHHHHH-HHTTCEEEEEEECTTCCEEEEEEESSSSSCSEEEEESS---------BSEEEEEEEEC
T ss_pred             eeEeeeEEEEcCCHHHHHHHH-HHCCCEEEEEEecCCcceeeeeeccCccccceeccccc---------CCCccceeEEe
Confidence            578999999999999999999 67999998776655555566777776543333222221         13779999999


Q ss_pred             CCHH---HHHHHHHHCCCeE--EeeC-----CCceEEEEEcCCCCeEEEEee
Q 029285          153 RDVS---KLKMILDKAGISY--TLSK-----SGRPAIFTRDPDANALEFTQV  194 (196)
Q Consensus       153 ~dl~---~~~~~l~~~G~~~--~~~~-----~g~~~~~~~DPdG~~iEl~e~  194 (196)
                      .+++   ++.++|+++|+..  +..+     .+...+|++|||||.|||+..
T Consensus        73 ~~~~~v~~~~~~l~~~g~~~~~~~~p~~h~~g~~~~~Y~~DPdG~~iEl~~~  124 (176)
T d1f1ua2          73 HEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDGHRIEIYTQ  124 (176)
T ss_dssp             SSHHHHHHHHHHHHHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEEC
T ss_pred             ccchhHHHHHHHHHHcCCceeeeecccccCCCCceEEEEECCCCCEEEEEeC
Confidence            9655   4567899999853  3221     235789999999999999863

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.74  E-value=4.3e-17  Score=121.61  Aligned_cols=131  Identities=15%  Similarity=0.119  Sum_probs=96.4

Q ss_pred             CCCCCceeceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeE--EEEeCCeEEEEEecCCCCCCC-------
Q 029285           66 SDKIDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGA--WLWVGAEMIHLMELPNPDPLS-------  136 (196)
Q Consensus        66 ~~~~~~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~--~l~~g~~~l~l~~~~~~~~~~-------  136 (196)
                      ...+++.+.+++||+|+|+|++++++||+++|||++..+...+......+  .+..++..+.+..........       
T Consensus         3 p~~~~~~i~~~dHv~i~V~Dle~a~~fY~~~LGf~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~   82 (167)
T d1sqda1           3 PKSDKFKVKRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGDLRFLFTAPYSPSLSAGEIKPTT   82 (167)
T ss_dssp             CCCCSSCEEEEEEEEEECSCHHHHHHHHHHHHTCEEEEEESGGGTCSSEEEEEEEETTEEEEEEEECCGGGTTTCCGGGC
T ss_pred             CCCCCCCCceEeEEEEEeCCHHHHHHHHHHHhCCeEEEEeeccCCCeeEEEEEeeCCCeeEEEecccccccccccccccc
Confidence            35678899999999999999999999999999999987665433322222  234455555554432211000       


Q ss_pred             --CCC------------CCCCCceEEEEEECCHHHHHHHHHHCCCeEEeeC----CCceEEEEEcCCCCeEEEEeecC
Q 029285          137 --GRP------------EHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQVDG  196 (196)
Q Consensus       137 --~~p------------~~~~~~~hi~f~v~dl~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~iEl~e~~~  196 (196)
                        ..+            .++.|+.||||.|+|+++++++|+++|+++..+|    ++.+.++++.+++..++|+|..+
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~G~~Hiaf~VdDi~aa~~~l~~~G~~~~~~P~~~~~~~~~a~I~~~gd~~~~~v~r~~  160 (167)
T d1sqda1          83 TASIPSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGAIPSSPPIVLNEAVTIAEVKLYGDVVLRYVSYKA  160 (167)
T ss_dssp             CCSSTTCCHHHHHHHHHHHCSEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEEETTTEEEEEEEEETTEEEEEEEECC
T ss_pred             ccccccCCcchHHHhhhccCCCceEEEEEeCCHHHHHHHHHHCCCEEecCCeecCCCEEEEEEEccCCcEEEEEecCC
Confidence              000            1345889999999999999999999999987654    45677899999999999999754

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=99.73  E-value=7.7e-18  Score=122.52  Aligned_cols=105  Identities=17%  Similarity=0.206  Sum_probs=76.3

Q ss_pred             eceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCe----EEEEEecCCCCCCCCCCCCCCCceEE
Q 029285           73 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE----MIHLMELPNPDPLSGRPEHGGRDRHT  148 (196)
Q Consensus        73 i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~----~l~l~~~~~~~~~~~~p~~~~~~~hi  148 (196)
                      +++++||.|.|+|++++++||+++|||++..+.....     .+....+.    ...+... +          ..+..|+
T Consensus         5 i~rl~Hv~l~v~D~~~s~~FY~~vLG~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~-~----------~~~~~~~   68 (145)
T d1mpya1           5 VMRPGHVQLRVLDMSKALEHYVELLGLIEMDRDDQGR-----VYLKAWTEVDKFSLVLREA-D----------EPGMDFM   68 (145)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHTTCCEEEEECTTSC-----EEEECTTCCBSCSEEEEEC-S----------SCEEEEE
T ss_pred             CcEeeeEEEEeCCHHHHHHHHHHhhCCEEEEeeccCc-----cceecccccceeecccccc-C----------cccceee
Confidence            7899999999999999999999999999987643221     22332221    1222211 1          1244567


Q ss_pred             EEEEC---CHHHHHHHHHHCCCeEEeeC----CC-ceEEEEEcCCCCeEEEEe
Q 029285          149 CIAIR---DVSKLKMILDKAGISYTLSK----SG-RPAIFTRDPDANALEFTQ  193 (196)
Q Consensus       149 ~f~v~---dl~~~~~~l~~~G~~~~~~~----~g-~~~~~~~DPdG~~iEl~e  193 (196)
                      ++.+.   |+++++++|+++|+.+...+    .| ++.+||+|||||.|||++
T Consensus        69 ~~~~~~~~dl~~~~~~L~~~g~~~~~~~~~~~~g~~~~~~f~DPdG~~iEl~~  121 (145)
T d1mpya1          69 GFKVVDEDALRQLERDLMAYGCAVEQLPAGELNSCGRRVRFQAPSGHHFELYA  121 (145)
T ss_dssp             EEEESCHHHHHHHHHHHHHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEES
T ss_pred             eeeehhHHHHHHHHHHHHHCCCcEEECCCcccCCceEEEEEECCCCCEEEEEE
Confidence            77665   78888999999999886543    23 589999999999999986

>d1ecsa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.72  E-value=2e-16  Score=111.41  Aligned_cols=102  Identities=23%  Similarity=0.332  Sum_probs=81.2

Q ss_pred             EEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEEEECCHHHHH
Q 029285           80 GILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLK  159 (196)
Q Consensus        80 ~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~p~~~~~~~hi~f~v~dl~~~~  159 (196)
                      .|.|+|+++|++||++ |||++....+      ..+++..++..+.+.......+.       ....++++.++++++++
T Consensus         7 ~l~v~Dl~~s~~FY~~-LGf~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~d~~~~~   72 (120)
T d1ecsa_           7 NLPSRDFDSTAAFYER-LGFGIVFRDA------GWMILQRGDLMLEFFAHPGLDPL-------ASWFSCCLRLDDLAEFY   72 (120)
T ss_dssp             EEEESCHHHHHHHHHT-TTCEEEEECS------SEEEEEETTEEEEEEECTTCCGG-------GCCCEEEEEESCHHHHH
T ss_pred             EEEeCCHHHHHHHHHH-cCCeeEEecC------ceeeeecceeccccccccccccC-------CCCcEEEEEECCHHHHH
Confidence            3999999999999998 9999987543      24667778888888776544321       23357999999999999


Q ss_pred             HHHHHCCCeEEe-----------eCCCceEEEEEcCCCCeEEEEeec
Q 029285          160 MILDKAGISYTL-----------SKSGRPAIFTRDPDANALEFTQVD  195 (196)
Q Consensus       160 ~~l~~~G~~~~~-----------~~~g~~~~~~~DPdG~~iEl~e~~  195 (196)
                      +.+++.|+.+..           .++|.+.+||+|||||.|||.|.|
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~~~~~DPDGn~iei~q~d  119 (120)
T d1ecsa_          73 RQCKSVGIQETSSGYPRIHAPELQGWGGTMAALVDPDGTLLRLIQNE  119 (120)
T ss_dssp             HHHHHTTCCBCSSSSSEEEEEEECTTSSEEEEEECTTSCEEEEEECC
T ss_pred             HHHhhhhhhhccccccccccceecCCCcEEEEEECCCCCEEEEEEcc
Confidence            999999887522           246789999999999999999976

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=3.5e-17  Score=119.87  Aligned_cols=125  Identities=14%  Similarity=0.137  Sum_probs=93.3

Q ss_pred             ceeceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCC--ceeEEEEeCCeEEEEEecCCCCCCC-C--CCCCCCCc
Q 029285           71 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLP--YRGAWLWVGAEMIHLMELPNPDPLS-G--RPEHGGRD  145 (196)
Q Consensus        71 ~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~--~~~~~l~~g~~~l~l~~~~~~~~~~-~--~p~~~~~~  145 (196)
                      -++.+++||+|.|+|+++|++||+++|||++......+...  .....+..++..+.|.......... .  ...++.++
T Consensus         7 ~~~~~~dHi~i~V~Dl~~a~~fY~~~lGf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~G~   86 (149)
T d1sqia1           7 GRFLHFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQGKIVFVLCSALNPWNKEMGDHLVKHGDGV   86 (149)
T ss_dssp             CEEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEEESSTTCHHHHHHHHHHCSEE
T ss_pred             CceeeEeEEEEEcCCHHHHHHHHhhccceEEEEEecccCCceEEEEEEecCCcEEEEEEeccCCCCchhhhhhhhCCCeE
Confidence            45789999999999999999999999999998765433322  2234456677788887655432211 1  12246788


Q ss_pred             eEEEEEECCHHHHHHHHHHCCCeEEeeC------CCc-eEEEEEcCCCCeEEEEeec
Q 029285          146 RHTCIAIRDVSKLKMILDKAGISYTLSK------SGR-PAIFTRDPDANALEFTQVD  195 (196)
Q Consensus       146 ~hi~f~v~dl~~~~~~l~~~G~~~~~~~------~g~-~~~~~~DPdG~~iEl~e~~  195 (196)
                      +||||.|+|+++++++|+++|+++..++      .|. +.++++.|+|..++|+|..
T Consensus        87 ~hiaf~V~di~~~~~~l~~~G~~~~~~P~~~~d~~G~v~~a~i~~~g~~~~~lier~  143 (149)
T d1sqia1          87 KDIAFEVEDCEHIVQKARERGAKIVREPWVEEDKFGKVKFAVLQTYGDTTHTLVEKI  143 (149)
T ss_dssp             EEEEEEEECHHHHHHHHHHHTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEE
T ss_pred             EEEEEEeccHHHHHHHHHHCCCEEccCCeEEECCCCeEEEEEEECCCCCEEEEEEeC
Confidence            9999999999999999999999876543      222 4578888888999999864

>d1kw3b2 d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=99.71  E-value=3.3e-17  Score=121.46  Aligned_cols=113  Identities=15%  Similarity=0.202  Sum_probs=79.0

Q ss_pred             eceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCC---CCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEE
Q 029285           73 VVSVHHVGILCENLERSLEFYQNILGLEINEARPH---DKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTC  149 (196)
Q Consensus        73 i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~---~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~p~~~~~~~hi~  149 (196)
                      ..+++||+|.|+|++++++||+++|||++......   ........|+..+.....+.....+        ..++++|++
T Consensus         8 ~~GlgHv~l~v~D~e~t~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~a~~~~~--------~~~gl~Hia   79 (156)
T d1kw3b2           8 DQGIGHFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNGRHHTIALAAFP--------IPKRIHHFM   79 (156)
T ss_dssp             GGCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSBSCSEEEECCS--------CSSSEEEEE
T ss_pred             CCCcceEEEecCCHHHHHHHHHHhcCceeeeEEeeccCCCCcceeEEEeeccccceeeeccCC--------CCCceeEEE
Confidence            36899999999999999999999999998764321   1112234556655443333222221        123789999


Q ss_pred             EEECCHH---HHHHHHHHCCCeEEee-C---CCceEEEEEcCCCC-eEEEEe
Q 029285          150 IAIRDVS---KLKMILDKAGISYTLS-K---SGRPAIFTRDPDAN-ALEFTQ  193 (196)
Q Consensus       150 f~v~dl~---~~~~~l~~~G~~~~~~-~---~g~~~~~~~DPdG~-~iEl~e  193 (196)
                      |.|++++   +++++|+++|+.+..+ +   ....++|++||||+ .+|+..
T Consensus        80 f~v~~~ddv~~~~d~l~~~G~~~~g~~rH~~~~~~s~Y~~DP~G~~~~E~~~  131 (156)
T d1kw3b2          80 LQANTIDDVGYAFDRLDAAGRITSLLGRHTNDQTLSFYADTPSPMIEVEFGW  131 (156)
T ss_dssp             EEBSSHHHHHHHHHHHHHTTCBCBCSEEESSSCCEEEEEECSSTTCEEEEEE
T ss_pred             EECCCHHHHHHHHHHHHhcCCceecCcccCCCCeEEEEEECCCCCeEEEEec
Confidence            9998555   4688999999865332 1   34688999999998 589865

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=99.70  E-value=2.2e-16  Score=118.53  Aligned_cols=129  Identities=12%  Similarity=0.074  Sum_probs=95.8

Q ss_pred             CCCCceeceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCce-e-EEEEeCCeEEEEEecCCCCCCC-------C
Q 029285           67 DKIDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYR-G-AWLWVGAEMIHLMELPNPDPLS-------G  137 (196)
Q Consensus        67 ~~~~~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~-~-~~l~~g~~~l~l~~~~~~~~~~-------~  137 (196)
                      ....+.+++++||+|.|+|++++++||+++|||+++.+......... . ..+..++..+.+..........       .
T Consensus         5 ~~d~~~i~~~~Hi~i~V~D~e~a~~FY~~~LGf~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (172)
T d1sp8a1           5 RSDRFHTLAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGSLSFLFTAPYAHGADAATAALPSF   84 (172)
T ss_dssp             CCCSSCEEEEEEEEEECSCHHHHHHHHHHHHTCCEEEEESGGGTCCSEEEEEEEETTEEEEEEEECCSSCCGGGCSSTTC
T ss_pred             CCccCCcCEEEEEEEEeCCHHHHHHHHHHhhCceEEEEecccccceeEEEEEeccCCeeeEEeeccCCCchhhhcccccC
Confidence            44678899999999999999999999999999999876554333222 2 2244566666665433221100       0


Q ss_pred             C--------CCCCCCceEEEEEECCHHHHHHHHHHCCCeEEeeC----CCceEEEEEcCCCCeEEEEeec
Q 029285          138 R--------PEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQVD  195 (196)
Q Consensus       138 ~--------p~~~~~~~hi~f~v~dl~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~iEl~e~~  195 (196)
                      .        ..++.++.||||.|+|+++++++|+++|+++..+|    +|.+.++++.|.+.+++|+|..
T Consensus        85 ~~~~~~~~~~~~g~Gi~Hiaf~VdDi~aa~~~l~~~Ga~~~~~P~~~~~g~~~a~v~~~g~~~~~lve~~  154 (172)
T d1sp8a1          85 SAAAARRFAADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPVDLGRGFRLAEVELYGDVVLRYVSYP  154 (172)
T ss_dssp             CHHHHHHHHHHHSSEEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEEETTEEEEEEEEETTEEEEEEECC
T ss_pred             CcchhhhhhhhcCCceEEEEEeeCcHHHHHHHHHHCcCEeccCCccCCCCEEEEEEECCCCcEEEEEecC
Confidence            0        11456889999999999999999999999986654    5668899999988889999865

>d1jifa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptomyces verticillus [TaxId: 29309]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptomyces verticillus [TaxId: 29309]

Probab=99.70  E-value=1.8e-16  Score=111.51  Aligned_cols=101  Identities=17%  Similarity=0.188  Sum_probs=81.0

Q ss_pred             EEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEEEECCHHHHH
Q 029285           80 GILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLK  159 (196)
Q Consensus        80 ~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~p~~~~~~~hi~f~v~dl~~~~  159 (196)
                      .|.|+|+++|++||+++|||++....+      ..+++..++..+++........        ....++.+.+.++++++
T Consensus        10 vL~v~Dl~~s~~FY~~vLG~~~~~~~~------~~~~~~~~~~~l~l~~~~~~~~--------~~~~~~~~~~~~i~~~~   75 (122)
T d1jifa_          10 VLTAVDVPANVSFWVDTLGFEKDFGDR------DFAGVRRGDIRLHISRTEHQIV--------ADNTSAWIEVTDPDALH   75 (122)
T ss_dssp             EEEESSHHHHHHHHHHTTCCEEEEECS------SEEEEEETTEEEEEEECSCHHH--------HTTCEEEEEESCHHHHH
T ss_pred             EEEcCCHHHHHHHHHhhhCCceEecCC------ceeEeeeeeeeeeeeccccccc--------cceeEEEEeechhHHHH
Confidence            599999999999999999999887543      2477888998999987654321        13357999999999999


Q ss_pred             HHHHHCCCeEEe-----------eCCCceEEEEEcCCCCeEEEEee
Q 029285          160 MILDKAGISYTL-----------SKSGRPAIFTRDPDANALEFTQV  194 (196)
Q Consensus       160 ~~l~~~G~~~~~-----------~~~g~~~~~~~DPdG~~iEl~e~  194 (196)
                      +++++.+.....           ..++++.+|++|||||+|||..-
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~DPdGn~ief~~~  121 (122)
T d1jifa_          76 EEWARAVSTDYADTSGPAMTPVGESPAGREFAVRDPAGNCVHFTAG  121 (122)
T ss_dssp             HHHHTTSCSCTTCTTSCEECCCEEETTEEEEEEECTTCCEEEEEEC
T ss_pred             HHHHhhcceEEeeccccccCccccCCCeEEEEEECCCCCEEEEEeC
Confidence            999999876521           12567899999999999999864

>d1xy7a_ d.32.1.9 (A:) Hypothetical protein At5g48480 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein At5g48480
domain: Hypothetical protein At5g48480
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.63  E-value=3.9e-15  Score=106.87  Aligned_cols=115  Identities=11%  Similarity=0.041  Sum_probs=81.8

Q ss_pred             EEEEEcCCHHHHHHHHHhccCCEEeeecCCCC-------CCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEE
Q 029285           78 HVGILCENLERSLEFYQNILGLEINEARPHDK-------LPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI  150 (196)
Q Consensus        78 hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~-------~~~~~~~l~~g~~~l~l~~~~~~~~~~~~p~~~~~~~hi~f  150 (196)
                      ++.+.+.|+++|++||+++||+++..+...++       .....+.+..++..+.+........... +...+...++++
T Consensus        10 ~l~v~~~~~~eAi~FY~~~fG~~~~~~~~~~~~~~~~~~~~~~~a~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~   88 (135)
T d1xy7a_          10 MLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLAGSSFVVCDVSSLPGFST-AKSEGSGVTFLL   88 (135)
T ss_dssp             EEEECTTCHHHHHHHHHHHHCCEEC---------------CCCEEEEEETTEEEEEEEGGGSTTCCC-CCTTSCCCEEEE
T ss_pred             EEEEECCCHHHHHHHHHHHhCCEEEEEEecCCccccccCCcEEEEEEEECCeeeecccccccccccc-CCCCCcceEEEE
Confidence            56677789999999999999999886543222       1123456778887777765432211111 222233458999


Q ss_pred             EECCHHHHHHHHHHCCCeEEeeC----CCceEEEEEcCCCCeEEEEe
Q 029285          151 AIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQ  193 (196)
Q Consensus       151 ~v~dl~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~iEl~e  193 (196)
                      .++|++++++++.++|+++..++    +|.+.++|+||+|+.|+|.|
T Consensus        89 ~v~d~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~v~Dp~G~~W~i~e  135 (135)
T d1xy7a_          89 GTKDAEAAVAKAVDAGAVKVEVTEAEVELGFKGKVTDPFGVTWIFAE  135 (135)
T ss_dssp             ECSCHHHHHHHHHHTTCEECCCCHHHHHTTEEEEEECTTSCEEEEEC
T ss_pred             eecCcceeEEEeecccceEecCcccccccCEEEEEECCCCCEEEEeC
Confidence            99999999999999999987664    57889999999999999976

>d1xrka_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptoalloteichus hindustanus [TaxId: 2017]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptoalloteichus hindustanus [TaxId: 2017]

Probab=99.63  E-value=4.3e-15  Score=103.61  Aligned_cols=102  Identities=12%  Similarity=0.133  Sum_probs=79.0

Q ss_pred             EEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEEEECCHHH
Q 029285           78 HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSK  157 (196)
Q Consensus        78 hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~p~~~~~~~hi~f~v~dl~~  157 (196)
                      +..|.|+|+++|++||+++|||++..+.+      ..+++..++..+++........        .+..++.+.+.+++.
T Consensus         7 ~pvL~v~D~~~s~~FY~~~LG~~~~~~~~------~~~~~~~~~~~l~~~~~~~~~~--------~~~~~~~~~~~~~~~   72 (120)
T d1xrka_           7 VPVLTARDVAEAVEFWTDRLGFSRVFVED------DFAGVVRDDVTLFISAVQDQVV--------PDNTQAWVWVRGLDE   72 (120)
T ss_dssp             EEEEEESCHHHHHHHHHHTTCCEEEEECS------SEEEEEETTEEEEEEECSCTTT--------GGGCEEEEEEECHHH
T ss_pred             EEEEEECCHHHHHHHHHHhhCCeEEEECC------CeeEEecccceeeccccccccC--------CCCceEEEeeccHHH
Confidence            45699999999999999999999987654      2467888898888887654432        244678899999999


Q ss_pred             HHHHHHHCCCeE--------Eee---CCCceEEEEEcCCCCeEEEEe
Q 029285          158 LKMILDKAGISY--------TLS---KSGRPAIFTRDPDANALEFTQ  193 (196)
Q Consensus       158 ~~~~l~~~G~~~--------~~~---~~g~~~~~~~DPdG~~iEl~e  193 (196)
                      +.+.+.+.+...        ..+   .++++.+||+|||||.|||+.
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~DPdGn~ief~~  119 (120)
T d1xrka_          73 LYAEWSEVVSTNFRDASGPAMTEIVEQPWGREFALRDPAGNCVHFVA  119 (120)
T ss_dssp             HHHHHTTTSBSCTTTCSSCEECCCEEETTEEEEEEECTTCCEEEEEE
T ss_pred             HHHHHHHhhhHHhhhcccccccCceecCCEEEEEEECCCCCEEEEEE
Confidence            988887665433        222   244689999999999999985

>d1cjxa1 d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.52  E-value=6.1e-15  Score=108.51  Aligned_cols=122  Identities=11%  Similarity=0.025  Sum_probs=89.3

Q ss_pred             CCCceeceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceE
Q 029285           68 KIDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRH  147 (196)
Q Consensus        68 ~~~~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~p~~~~~~~h  147 (196)
                      ++||.+.+++||++.|+|++++.+||+. |||+...+....    ....+..|+..+.+-..++.........++.+++|
T Consensus         2 ~np~g~~Gidhv~fav~d~~~~~~~~~~-lGF~~~~~~~~~----~~~l~~~G~i~ll~~~~~~s~~~~~~~~hg~gv~h   76 (150)
T d1cjxa1           2 ENPMGLMGFEFIEFASPTPGTLEPIFEI-MGFTKVATHRSK----NVHLYRQGEINLILNNEPNSIASYFAAEHGPSVCG   76 (150)
T ss_dssp             CCTTCEEEEEEEEEECSSTTSSHHHHHH-TTCEEEEEESSS----SEEEEEETTEEEEEECCSSSHHHHHHHHHSSEEEE
T ss_pred             CCCCccCCEEEEEEecCCHHHHHHHHHH-hCCEEEecccce----EEEEEecCcEEEEecCCCCCHhHhHHhhCCCceEE
Confidence            4788899999999999999999999987 999999865432    23445666654444322111100001346789999


Q ss_pred             EEEEECCHHHHHHHHHHCCCeEEeeCC---CceEEEEEcCCCCeEEEEee
Q 029285          148 TCIAIRDVSKLKMILDKAGISYTLSKS---GRPAIFTRDPDANALEFTQV  194 (196)
Q Consensus       148 i~f~v~dl~~~~~~l~~~G~~~~~~~~---g~~~~~~~DPdG~~iEl~e~  194 (196)
                      ++|.|+|++++++++.++|+++...+.   +.....+++|+|.++.|++.
T Consensus        77 iaf~V~D~~~a~~~a~~~Ga~~i~~~~~~g~~~~~~i~g~gg~~i~Fv~~  126 (150)
T d1cjxa1          77 MAFRVKDSQKAYNRALELGAQPIHIDTGPMELNLPAIKGIGGAPLYLIDR  126 (150)
T ss_dssp             EEEEESCHHHHHHHHHHTTCCBCCCCCCTTCBCCCEEECGGGCEEEEECC
T ss_pred             EEEEeCCHHHHHHHHHHCCCEEcccCCCCCceeeeEEEcCCCCEEEEECc
Confidence            999999999999999999998765442   24556778888888888764

>d1sp8a2 d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=99.28  E-value=5e-12  Score=98.41  Aligned_cols=99  Identities=14%  Similarity=0.136  Sum_probs=69.6

Q ss_pred             CCceeceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCC-----CCceeEEEEeC--CeEEEEEecCCCCCCCCCC--
Q 029285           69 IDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDK-----LPYRGAWLWVG--AEMIHLMELPNPDPLSGRP--  139 (196)
Q Consensus        69 ~~~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~-----~~~~~~~l~~g--~~~l~l~~~~~~~~~~~~p--  139 (196)
                      ++..+.+++||++.|+|++++++||+++|||+.....+..+     ...+...+..+  ...+.+.+...+.....+.  
T Consensus         3 ~d~Gl~~IDHI~i~V~dld~a~~fY~~vLGf~~~~~~~~~~i~~~~~~l~s~v~~~~~g~v~~~l~E~~~~~~~~s~i~~   82 (224)
T d1sp8a2           3 ADYGLSRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSENVLLPLNEPVHGTKRRSQIQT   82 (224)
T ss_dssp             CCCSEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEC--------CEEEEEEECSSSCCEEEEEEECCCSSSCCHHHH
T ss_pred             CCCCcCeeeeeEEeccCHHHHHHHHHHHhCCEEEEEeccccccccceeEEEEEEEcCCCccceeeeeecCCCCCccHHHH
Confidence            45678999999999999999999999999999876543222     12223333333  3467777664442221111  


Q ss_pred             ---C-CCCCceEEEEEECCHHHHHHHHHHCCC
Q 029285          140 ---E-HGGRDRHTCIAIRDVSKLKMILDKAGI  167 (196)
Q Consensus       140 ---~-~~~~~~hi~f~v~dl~~~~~~l~~~G~  167 (196)
                         . .++|++||||.|+|+.++++.|+++|+
T Consensus        83 FL~~~~g~GiqHIAf~vdDI~~av~~L~arGv  114 (224)
T d1sp8a2          83 FLDHHGGPGVQHMALASDDVLRTLREMQARSA  114 (224)
T ss_dssp             HHHHHTSSEEEEEEEEETTHHHHHHHHHTSGG
T ss_pred             HHHhccCCCceeEEEEeCCHHHHHHHHHhccc
Confidence               1 356899999999999999999998864

>d1u6la_ d.32.1.7 (A:) Hypothetical protein PA1353 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1353
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.19  E-value=5.8e-10  Score=79.60  Aligned_cols=108  Identities=14%  Similarity=0.052  Sum_probs=73.8

Q ss_pred             EcC-CHHHHHHHHHhccCCEEeeecCCCCC------------CceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEE
Q 029285           82 LCE-NLERSLEFYQNILGLEINEARPHDKL------------PYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHT  148 (196)
Q Consensus        82 ~v~-Dl~~a~~FY~~vLG~~~~~~~~~~~~------------~~~~~~l~~g~~~l~l~~~~~~~~~~~~p~~~~~~~hi  148 (196)
                      ..+ |.++|++||+++||+++.......+.            ....+-+.+++..+.+.......     +...+...++
T Consensus         9 ~f~g~a~eAl~FY~~~fG~e~~~~~~~~~~~~~~~~~~~~~~~i~ha~l~i~g~~~~~~d~~~~~-----~~~~~~~~~~   83 (137)
T d1u6la_           9 IFNGNCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPADWKDKIMHARLVVGSFALMASDNHPAY-----PYEGIKGCSI   83 (137)
T ss_dssp             EESSCHHHHHHHHHHHHCSEEEEEEESTTTTC----CCSSCCCEEEEEEEETTEEEEEEECCTTS-----CCCCCCSEEE
T ss_pred             EECCCHHHHHHHHHHHCCCEEEEEEEcccCCccccCCCCCCCeEEEEEEEEcCeEEEecccCCcc-----cccCCCcEEE
Confidence            344 99999999999999999864432221            11234566777666655432221     2222344688


Q ss_pred             EEEECCHHH--HHHHHHHCCCeEEee----CCCceEEEEEcCCCCeEEEEee
Q 029285          149 CIAIRDVSK--LKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  194 (196)
Q Consensus       149 ~f~v~dl~~--~~~~l~~~G~~~~~~----~~g~~~~~~~DPdG~~iEl~e~  194 (196)
                      ++.+++.++  .+.+..++|+++..+    ++|.+..+|+||+|+.|+|...
T Consensus        84 ~l~~~~~d~~~~~~~~l~~G~~v~~p~~~~~wG~~~g~v~Dp~G~~W~i~~~  135 (137)
T d1u6la_          84 SLNVDSKAEAERLFNALAEGGSVQMPLGPTFWAASFGMFTDRFGVAWMVNCE  135 (137)
T ss_dssp             EEECSSHHHHHHHHHHHHTTSEEEEEEEEETTEEEEEEEECTTSCEEEEEES
T ss_pred             EEEcCCHHHHHHHHhhcccCceeecCccccCCCcEEEEEECCCCCEEEEEec
Confidence            999886654  466777889988654    4778899999999999999753

>d1cjxa2 d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.15  E-value=3.3e-11  Score=92.38  Aligned_cols=99  Identities=13%  Similarity=0.072  Sum_probs=68.2

Q ss_pred             eceeeEEEEEcC--CHHHHHHHHHhccCCEEeeecCCCCC--CceeEEEEeCC--eEEEEEecCCCC-CCCCC---CCCC
Q 029285           73 VVSVHHVGILCE--NLERSLEFYQNILGLEINEARPHDKL--PYRGAWLWVGA--EMIHLMELPNPD-PLSGR---PEHG  142 (196)
Q Consensus        73 i~~l~hv~l~v~--Dl~~a~~FY~~vLG~~~~~~~~~~~~--~~~~~~l~~g~--~~l~l~~~~~~~-~~~~~---p~~~  142 (196)
                      +.+++||++.|+  |+++++.||+++|||+.....+..+.  ......+...+  ..+.+....... +....   ...+
T Consensus         3 l~~IDHIa~~V~~~~l~~a~~FY~~vlGf~~~~~~di~~~~~~l~s~~~~~~~~~~~~~l~~~~~~~~sqi~~fl~~~~g   82 (203)
T d1cjxa2           3 LKVIDHLTHNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAPDGMIRIPLNEESSKGAGQIEEFLMQFNG   82 (203)
T ss_dssp             EEEEEEECEECCTTHHHHHHHHHHHHHCCEEEEEEEEECSSCEEEEEEEECTTSSCEEEEEEECTTCCSHHHHHHHHHTS
T ss_pred             CCeeCeeEeccChhhHHHHHHHHHHHhCCEEeEEEecCCCcceEEEEEeeccccccceecccCCCCCccHHHHHHHhcCC
Confidence            678999999998  99999999999999998875543222  22223333332  344444332221 11111   1145


Q ss_pred             CCceEEEEEECCHHHHHHHHHHCCCeEEe
Q 029285          143 GRDRHTCIAIRDVSKLKMILDKAGISYTL  171 (196)
Q Consensus       143 ~~~~hi~f~v~dl~~~~~~l~~~G~~~~~  171 (196)
                      +|++||||.|+|+.+++++|+++|+++..
T Consensus        83 ~GiqHIAf~vdDI~aav~~L~~~Gv~fL~  111 (203)
T d1cjxa2          83 EGIQHVAFLTDDLVKTWDALKKIGMRFMT  111 (203)
T ss_dssp             SBCCEEEEEESCHHHHHHHHHHTTCCBCC
T ss_pred             CCCceEEEEeCCHHHHHHHHHhcCCcccc
Confidence            78999999999999999999999998754

>d1t47a2 d.32.1.3 (A:179-377) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=99.11  E-value=3.4e-11  Score=91.93  Aligned_cols=100  Identities=14%  Similarity=0.154  Sum_probs=67.7

Q ss_pred             eceeeEEEEEcC--CHHHHHHHHHhccCCEEeeecCCC-----CCCceeEEEEeCC--eEEEEEecCCCCCCC--CC--C
Q 029285           73 VVSVHHVGILCE--NLERSLEFYQNILGLEINEARPHD-----KLPYRGAWLWVGA--EMIHLMELPNPDPLS--GR--P  139 (196)
Q Consensus        73 i~~l~hv~l~v~--Dl~~a~~FY~~vLG~~~~~~~~~~-----~~~~~~~~l~~g~--~~l~l~~~~~~~~~~--~~--p  139 (196)
                      +.+++||++.|+  ++++++.||+++|||+.......+     .......-+..++  ..+.+.+........  ..  .
T Consensus         4 f~~IDHia~avp~~~l~~av~fY~~vfGf~~~~~~~~~di~~~~~~l~s~~~~s~~~~v~l~lne~~~~~~~s~i~~FL~   83 (199)
T d1t47a2           4 FQAIDHCVGNVELGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADGTLKVKFPINEPALAKKKSQIDEYLE   83 (199)
T ss_dssp             CCEEEEEEEECCTTCHHHHHHHHHHHHCCEECSCCBCHHHHTTTTSEEEEEEECTTSCSEEEEEEECCSSSCCHHHHHHH
T ss_pred             ceeeCceEeccChhhHHHHHHHHHHHhCCeEeeEecccccccceeEEEEeeccccccccceeecccCccccccchhhhhh
Confidence            568999999998  999999999999999987643221     1222222223232  345555433221111  11  1


Q ss_pred             -CCCCCceEEEEEECCHHHHHHHHHHCCCeEEee
Q 029285          140 -EHGGRDRHTCIAIRDVSKLKMILDKAGISYTLS  172 (196)
Q Consensus       140 -~~~~~~~hi~f~v~dl~~~~~~l~~~G~~~~~~  172 (196)
                       ..++|++||||.|+|+.++.+.|+++|+++...
T Consensus        84 ~~~g~GiQHIAl~tdDI~~av~~L~~~G~~fL~~  117 (199)
T d1t47a2          84 FYGGAGVQHIALNTGDIVETVRTMRAAGVQFLDT  117 (199)
T ss_dssp             HHTSCEEEEEEEECSCHHHHHHHHHHTTCCBCCC
T ss_pred             hcCCCcceEEEEEcCCHHHHHHHHHHcCCCCCCC
Confidence             235689999999999999999999999987544

>d1sqia2 d.32.1.3 (A:157-366) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.07  E-value=1.4e-10  Score=89.19  Aligned_cols=103  Identities=13%  Similarity=0.087  Sum_probs=68.9

Q ss_pred             CCceeceeeEEEEEcCC--HHHHHHHHHhccCCEEeeecCCCCC-----CceeEEEEeC--CeEEEEEecCCCCCCCC--
Q 029285           69 IDYGVVSVHHVGILCEN--LERSLEFYQNILGLEINEARPHDKL-----PYRGAWLWVG--AEMIHLMELPNPDPLSG--  137 (196)
Q Consensus        69 ~~~~i~~l~hv~l~v~D--l~~a~~FY~~vLG~~~~~~~~~~~~-----~~~~~~l~~g--~~~l~l~~~~~~~~~~~--  137 (196)
                      ++..+.+++||++.|++  +++++.||+++|||+.....+..+.     ..+...+...  ...+.|.+.........  
T Consensus        18 p~~gl~~IDHv~~~Vp~~~ld~av~fY~~vfGf~~~~~~~~~~i~~~~~~l~s~~l~s~~~~i~~~lne~~~~~~~sqi~   97 (210)
T d1sqia2          18 PSCNLEIIDHIVGNQPDQEMESASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESIKMPINEPAPGRKKSQIQ   97 (210)
T ss_dssp             CCCCEEEEEEEEEECCTTCHHHHHHHHHHHHCCEEECCC-----------CEEEEEECTTSCCEEEEEECC-----CHHH
T ss_pred             CCCCcceeCceEeccCchhHHHHHHHHHHHhCCEEEEEecccccCCceeEEEEEEEEecCccccccccccCCCCcccHHH
Confidence            34568899999999997  9999999999999997754332221     1222334433  33566655433211111  


Q ss_pred             C---CCCCCCceEEEEEECCHHHHHHHHHHCCCeEEe
Q 029285          138 R---PEHGGRDRHTCIAIRDVSKLKMILDKAGISYTL  171 (196)
Q Consensus       138 ~---p~~~~~~~hi~f~v~dl~~~~~~l~~~G~~~~~  171 (196)
                      .   ...|+|++||||.|+|+.++.++|+++|+++..
T Consensus        98 ~fl~~~~G~GiQHIAf~t~DI~~av~~L~~~Gv~fL~  134 (210)
T d1sqia2          98 EYVDYNGGAGVQHIALRTEDIITTIRHLRERGMEFLA  134 (210)
T ss_dssp             HHHHHHTSSEEEEEEEEESCHHHHHHHHHHHTCCBCC
T ss_pred             HHHhhcCCCCeeEEEEEcCCHHHHHHHHHHcCCCCCC
Confidence            1   124778999999999999999999999998753

>d1sqda2 d.32.1.3 (A:181-410) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.98  E-value=8.5e-10  Score=85.84  Aligned_cols=99  Identities=15%  Similarity=0.166  Sum_probs=67.0

Q ss_pred             CCceeceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCc-----eeEEEEe--CCeEEEEEecCCCCCCCCC---
Q 029285           69 IDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPY-----RGAWLWV--GAEMIHLMELPNPDPLSGR---  138 (196)
Q Consensus        69 ~~~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~-----~~~~l~~--g~~~l~l~~~~~~~~~~~~---  138 (196)
                      .+..+.+++||++.|+|++++.+||.++||+.........+...     +..-+..  +...+.+.++..+.....+   
T Consensus        16 ~~~gl~~IDHI~iaVpdld~a~~~y~~~lG~~~~~~~~~~di~~~~~~l~s~v~~s~~g~v~~~l~E~~~~~~~~sqi~~   95 (230)
T d1sqda2          16 LDYGIRRLDHAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLASNDEMVLLPINEPVHGTKRKSQIQT   95 (230)
T ss_dssp             CCSSEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEC--------CCEEEEEEECTTSCSEEEEEEECCC---CCHHHH
T ss_pred             CCCCcCccCcceecccCHHHHHHHHHHHcCCeeeEEecccccccceeeEeeccccCCCcccceeEEeecCCCCCcchHHH
Confidence            34568899999999999999999999999998887654333211     1111222  2346777765433211111   


Q ss_pred             ---CCCCCCceEEEEEECCHHHHHHHHHHCCC
Q 029285          139 ---PEHGGRDRHTCIAIRDVSKLKMILDKAGI  167 (196)
Q Consensus       139 ---p~~~~~~~hi~f~v~dl~~~~~~l~~~G~  167 (196)
                         ...|+|++||||.|+|+.++++.|+++|.
T Consensus        96 FL~~~~G~GiQHIAf~tdDI~aav~~LrarG~  127 (230)
T d1sqda2          96 YLEHNEGAGLQHLALMSEDIFRTLREMRKRSS  127 (230)
T ss_dssp             HHHHHTSCEEEEEEEEESCHHHHHHHHHHHGG
T ss_pred             HHhhccCCceeEEEEEeCCHHHHHHHHHHhhc
Confidence               12477999999999999999999998753

>d1u7ia_ d.32.1.7 (A:) Hypothetical protein PA1358 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1358
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.93  E-value=7.6e-08  Score=68.31  Aligned_cols=110  Identities=8%  Similarity=0.020  Sum_probs=72.7

Q ss_pred             EEEEEcCCHHHHHHHHHhccCCEEeeec-------CCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEE
Q 029285           78 HVGILCENLERSLEFYQNILGLEINEAR-------PHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI  150 (196)
Q Consensus        78 hv~l~v~Dl~~a~~FY~~vLG~~~~~~~-------~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~p~~~~~~~hi~f  150 (196)
                      ++.+.-.|.++|++||+++||...+.+.       +......-++-|.+++..+.+........    +.. +....+++
T Consensus         9 yL~f~g~~a~eAi~FY~~~Fg~~~v~~~~~~~~~~~~~~g~v~ha~l~i~~~~i~~~d~~~~~~----~~~-~~~~s~~l   83 (134)
T d1u7ia_           9 FLMFQGVQAEAAMNFYLSLFDDAEILQIQRYGAEGPGPEGSVLKALFRLGDQSVHCIDSHVRHA----FDF-TPAFSFFV   83 (134)
T ss_dssp             EEEEESSCHHHHHHHHHHHCSSEEEEEEEECCTTCSSCTTSEEEEEEEETTEEEEEEEESSCCS----CCC-CTTEEEEE
T ss_pred             EEEECCcCHHHHHHHHHHhCCCeEEEEEEEcCCCCCCCCCCEEEEEEEECCEEEEEecCCCCCC----CCC-CCceEEEE
Confidence            4555567999999999999998765432       11222334567888998888875432211    111 23356888


Q ss_pred             EECCHHHH--HHHHHHCCCeEEee----CCCceEEEEEcCCCCeEEEE
Q 029285          151 AIRDVSKL--KMILDKAGISYTLS----KSGRPAIFTRDPDANALEFT  192 (196)
Q Consensus       151 ~v~dl~~~--~~~l~~~G~~~~~~----~~g~~~~~~~DPdG~~iEl~  192 (196)
                      .+++.++.  +.+..+.|.++..+    ++|.+...|+||+|+.|.|.
T Consensus        84 ~~~~~d~~~~~~~~l~~gg~v~~p~~~~~~g~~~g~v~D~fGv~W~i~  131 (134)
T d1u7ia_          84 DCESNAQIERLAEALSDGGKALMPLGDYGFSQRFAWLADRFGVSWQLN  131 (134)
T ss_dssp             ECCCHHHHHHHHHHHHTTSEEEEEEECCSSSSEEEEEECTTSCEEEEE
T ss_pred             EeccHHHHHHHHHHHhcCCEEecCcccccccceEEEEECCCCCEEEEE
Confidence            88866544  33344556676544    46788899999999999985

>d1tsja_ d.32.1.7 (A:) Hypothetical protein MW1090 {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein MW1090
species: Staphylococcus aureus [TaxId: 1280]

Probab=98.46  E-value=3.2e-06  Score=59.26  Aligned_cols=105  Identities=8%  Similarity=0.077  Sum_probs=67.2

Q ss_pred             EEEcC-CHHHHHHHHHhccCCEEeeec-------CCCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEEE
Q 029285           80 GILCE-NLERSLEFYQNILGLEINEAR-------PHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIA  151 (196)
Q Consensus        80 ~l~v~-Dl~~a~~FY~~vLG~~~~~~~-------~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~p~~~~~~~hi~f~  151 (196)
                      -|.++ |.++|++||+++||-..+.+.       +......-++-|.+++..+.+........         ...++++.
T Consensus         9 yl~f~g~a~eAi~FY~~vFg~~~v~~~~~~~~~~~~~~g~i~ha~l~i~g~~~~~~d~~~~~~---------~~~s~~v~   79 (129)
T d1tsja_           9 FLMFNNQAEEAVKLYTSLFEDSEIITMAKYGENGPGDPGTVQHSIFTLNGQVFMAIDANSGTE---------LPISLFVT   79 (129)
T ss_dssp             EEECSSCHHHHHHHHHHHSSSCEEEEEEECC-----CTTSEEEEEEEETTEEEEEEC----------------CCCEEEE
T ss_pred             EEEECCCHHHHHHHHHHHcCCcEEEEEEecCCCCCCCCCcEEEEEEEECCEEEEeecCCCCCC---------CCEEEEec
Confidence            45565 999999999999976443221       11223344567888998887764332211         11357788


Q ss_pred             ECCHHHH---HHHHHHCCCeEEee----CCCceEEEEEcCCCCeEEEEee
Q 029285          152 IRDVSKL---KMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  194 (196)
Q Consensus       152 v~dl~~~---~~~l~~~G~~~~~~----~~g~~~~~~~DPdG~~iEl~e~  194 (196)
                      +++.+++   +++|.+ |.++..+    ++|.+...|+||.|+.|.|..+
T Consensus        80 ~~~~~e~~~~~~~L~~-gg~v~~p~~~~~~g~~~g~v~D~fGv~W~i~~p  128 (129)
T d1tsja_          80 VKDTIEMERLFNGLKD-EGAILMPKTNMPPYREFAWVQDKFGVSFQLALP  128 (129)
T ss_dssp             CSSHHHHHHHHHHHHT-TCEEEEEEEEETTEEEEEEEECTTSCEEEEEEC
T ss_pred             cCCHHHHHHHHHHhcc-CCEEecccccccccceEEEEECCCCCEEEEeCC
Confidence            8877664   556655 5566543    4677889999999999999754

>d1u69a_ d.32.1.7 (A:) Hypothetical protein PA2721 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA2721
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.42  E-value=0.0036  Score=44.62  Aligned_cols=100  Identities=13%  Similarity=0.008  Sum_probs=62.1

Q ss_pred             EEcCCHHHHHHHHHhccCCEEe-eec--C-----CCCCCceeEEEEeCCeEEEEEecCCCCCCCCCCCCCCCceEEEEEE
Q 029285           81 ILCENLERSLEFYQNILGLEIN-EAR--P-----HDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  152 (196)
Q Consensus        81 l~v~Dl~~a~~FY~~vLG~~~~-~~~--~-----~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~p~~~~~~~hi~f~v  152 (196)
                      +.-.|.++|++||.++||-..+ ...  +     ......-++.+.++|..+.+......     .+ .+ ...++++.+
T Consensus         8 ~F~Gna~EAl~FY~~vFg~~~i~~~~~~~~~~p~~~~~~Vmha~l~i~g~~lm~sD~~~~-----~~-~~-~~~sl~l~~   80 (156)
T d1u69a_           8 WYDSAALEAATFYAETFPDSAVLAVHRAPGDYPSGKEGDVLTVEFRVMGIPCLGLNGGPA-----FR-HS-EAFSFQVAT   80 (156)
T ss_dssp             EESSCHHHHHHHHHHHSTTEEEEEEEECSSCBTTBCTTSEEEEEEEETTEEEEEEECCTT-----CC-CC-TTEEEEEEE
T ss_pred             eECCcHHHHHHHHHHHcCCCEEeEEEecCCCCCCCCCCcEEEEEEEECCeEEEeecCCCC-----CC-CC-CCeEEEEec
Confidence            4457999999999999965333 211  1     11122345678888876655543211     11 12 235788999


Q ss_pred             CCHH---HHHHHHHHCCCeEEeeCCCceEEEEEcCCCCeEEEEe
Q 029285          153 RDVS---KLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQ  193 (196)
Q Consensus       153 ~dl~---~~~~~l~~~G~~~~~~~~g~~~~~~~DPdG~~iEl~e  193 (196)
                      ++.+   +++++|.+.| .+.. +-|    .++|+.|..|.|..
T Consensus        81 d~~eE~d~~f~~LsegG-~~~~-~~G----~v~DkFGV~Wqi~~  118 (156)
T d1u69a_          81 DDQAETDRLWNAIVDNG-GEES-ACG----WCRDKWGISWQITP  118 (156)
T ss_dssp             SSHHHHHHHHHHHHHTT-CEEC-STT----EEECTTSCEEEEEE
T ss_pred             CCHHHHHHHHHHHhccC-CCCC-CCe----EEECCCCCEEEeCh
Confidence            8655   4577777776 3322 222    59999999999984

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

Probab=94.41  E-value=0.078  Score=35.72  Aligned_cols=56  Identities=16%  Similarity=0.179  Sum_probs=40.1

Q ss_pred             eeceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEe-CCeEEEEEe
Q 029285           72 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLME  128 (196)
Q Consensus        72 ~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~-g~~~l~l~~  128 (196)
                      ...++.|+++.|.|+++..+..++ .|.++...........+.+|+.. +|..++|++
T Consensus        90 ~~~g~~hi~~~v~d~~~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~e  146 (149)
T d1ss4a_          90 NALGYLRVMFTVEDIDEMVSRLTK-HGAELVGEVVQYENSYRLCYIRGVEGILIGLAE  146 (149)
T ss_dssp             SSBEEEEEEEEESCHHHHHHHHHH-TTCEESSCCEEETTTEEEEEEECGGGCEEEEEE
T ss_pred             CCcceeEEEEeechhHHHHHHHHH-CCCeEccCCeECCCCeEEEEEECCCCCEEEEEE
Confidence            346899999999999999999998 89988653322223344556654 356788875

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=94.33  E-value=0.069  Score=37.27  Aligned_cols=58  Identities=14%  Similarity=0.035  Sum_probs=43.2

Q ss_pred             ceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEE-eCCeEEEEEecCCC
Q 029285           74 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLW-VGAEMIHLMELPNP  132 (196)
Q Consensus        74 ~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~-~g~~~l~l~~~~~~  132 (196)
                      .++.||+|.|.|++++.+...+ .|.+............+.+++. .|+..++|++....
T Consensus       103 ~G~~Hiaf~VdDi~aa~~~l~~-~G~~~~~~P~~~~~~~~~a~I~~~gd~~~~~v~r~~~  161 (167)
T d1sqda1         103 LGVRAVAIEVEDAESAFSISVA-NGAIPSSPPIVLNEAVTIAEVKLYGDVVLRYVSYKAE  161 (167)
T ss_dssp             SEEEEEEEEESCHHHHHHHHHH-TTCCEEEEEEEETTTEEEEEEEEETTEEEEEEEECCC
T ss_pred             CCceEEEEEeCCHHHHHHHHHH-CCCEEecCCeecCCCEEEEEEEccCCcEEEEEecCCC
Confidence            3899999999999999999998 8998876433222335556654 47778889886543

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=94.08  E-value=0.077  Score=37.40  Aligned_cols=58  Identities=14%  Similarity=0.127  Sum_probs=45.1

Q ss_pred             ceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEEe-CCeEEEEEecCCC
Q 029285           74 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNP  132 (196)
Q Consensus        74 ~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~-g~~~l~l~~~~~~  132 (196)
                      .++.|++|.|.|++++.+-..+ .|.++...........+.+++.. |+..++|++..+.
T Consensus        98 ~Gi~Hiaf~VdDi~aa~~~l~~-~Ga~~~~~P~~~~~g~~~a~v~~~g~~~~~lve~~~~  156 (172)
T d1sp8a1          98 LAVRAVALRVADAEDAFRASVA-AGARPAFGPVDLGRGFRLAEVELYGDVVLRYVSYPDG  156 (172)
T ss_dssp             SEEEEEEEEESCHHHHHHHHHT-TTCCEEEEEEEEETTEEEEEEEEETTEEEEEEECCTT
T ss_pred             CceEEEEEeeCcHHHHHHHHHH-CcCEeccCCccCCCCEEEEEEECCCCcEEEEEecCCC
Confidence            4889999999999999999998 99998764332233456666654 6788999988765

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

Probab=93.34  E-value=0.19  Score=32.00  Aligned_cols=50  Identities=20%  Similarity=0.294  Sum_probs=39.7

Q ss_pred             CceEEEEEECCHHHHHHHHHH-CCCeEEeeCCCceEEEEEcCCCCeEEEEee
Q 029285          144 RDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDPDANALEFTQV  194 (196)
Q Consensus       144 ~~~hi~f~v~dl~~~~~~l~~-~G~~~~~~~~g~~~~~~~DPdG~~iEl~e~  194 (196)
                      ++.|+.+.|+|+++..+...+ .|.++..... ...++..++++..+.+.+.
T Consensus         3 ~i~Hi~l~v~Dl~~a~~FY~~~lG~~~~~~~~-~~~~~~~~~~~~~~~~~~~   53 (113)
T d1xqaa_           3 GIKHLNLTVADVVAAREFLEKYFGLTCSGTRG-NAFAVMRDNDGFILTLMKG   53 (113)
T ss_dssp             CCCEEEEEESCHHHHHHHHHHHHCCEEEEEET-TTEEEEECTTCCEEEEEEC
T ss_pred             cccEEEEEeCCHHHHHHHHHHhhCCEEEEeec-Ccceeeeecceeeeeeeee
Confidence            568999999999999998876 7988866544 3456778888888888764

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

Probab=91.13  E-value=0.16  Score=33.73  Aligned_cols=57  Identities=14%  Similarity=0.238  Sum_probs=40.5

Q ss_pred             eceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCC-CCCceeEEEEe---CCeEEEEEecC
Q 029285           73 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHD-KLPYRGAWLWV---GAEMIHLMELP  130 (196)
Q Consensus        73 i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~-~~~~~~~~l~~---g~~~l~l~~~~  130 (196)
                      -.+++|+++.|.|++++.+-.++ .|.++....+.. ..+...+|+..   +|..++|++.+
T Consensus        84 ~~g~~Hia~~v~di~~~~~~l~~-~Gv~~~~~~~~~~~~g~~~~f~~p~dp~G~~iEl~e~p  144 (145)
T d1jc4a_          84 RAGLHHMAWRVDDIDAVSATLRE-RGVQLLYDEPKLGTGGNRINFMHPKSGKGVLIELTQYP  144 (145)
T ss_dssp             CCEEEEEEEECSCHHHHHHHHHH-HTCCBSCSSCEECSSSCEEEEBCGGGGTTSCEEEEECC
T ss_pred             CCcceEEEEecchHHHHHHHHHH-CCCEEeCCCceECCCCCEEEEEeccCCCCeEEEEEECC
Confidence            35799999999999999999998 799876433221 22234455532   57788888764

>d1cjxa1 d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=89.76  E-value=0.3  Score=33.69  Aligned_cols=55  Identities=11%  Similarity=0.078  Sum_probs=39.8

Q ss_pred             ceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEE-eCCeEEEEEecC
Q 029285           74 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLW-VGAEMIHLMELP  130 (196)
Q Consensus        74 ~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~-~g~~~l~l~~~~  130 (196)
                      .++.|+++.|.|++++.+...+ +|.++...... ........+. .|+..+.|++..
T Consensus        72 ~gv~hiaf~V~D~~~a~~~a~~-~Ga~~i~~~~~-~g~~~~~~i~g~gg~~i~Fv~~~  127 (150)
T d1cjxa1          72 PSVCGMAFRVKDSQKAYNRALE-LGAQPIHIDTG-PMELNLPAIKGIGGAPLYLIDRF  127 (150)
T ss_dssp             SEEEEEEEEESCHHHHHHHHHH-TTCCBCCCCCC-TTCBCCCEEECGGGCEEEEECCC
T ss_pred             CceEEEEEEeCCHHHHHHHHHH-CCCEEcccCCC-CCceeeeEEEcCCCCEEEEECcC
Confidence            5899999999999999999998 99998765332 2222333343 367788888753

>d1k4na_ d.32.1.5 (A:) Hypothetical protein YecM (EC4020) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YecM (EC4020)
domain: Hypothetical protein YecM (EC4020)
species: Escherichia coli [TaxId: 562]

Probab=89.01  E-value=2.4  Score=30.22  Aligned_cols=78  Identities=15%  Similarity=0.121  Sum_probs=51.1

Q ss_pred             eceeeEEEEEcCCHHHHHHHHHhccCCEEee-ecCCCCCCcee----EEEEeCCeEEEEEecCCCCCCCCCCCCCCCceE
Q 029285           73 VVSVHHVGILCENLERSLEFYQNILGLEINE-ARPHDKLPYRG----AWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRH  147 (196)
Q Consensus        73 i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~-~~~~~~~~~~~----~~l~~g~~~l~l~~~~~~~~~~~~p~~~~~~~h  147 (196)
                      -..++|++++|++.+.+.+|-+..+..-..- ...-.+.+...    .=+.+++..+..++.+-+...  .+.+ .|.-|
T Consensus        41 ~~~~DHialR~n~~~~A~~w~~~l~~~G~llSen~INGRPI~l~~L~~Pl~~~~~~I~ciELP~P~~k--~Yp~-eGWEH  117 (190)
T d1k4na_          41 PLTADHISLRCHQNATAERWRRGFEQCGELLSENMINGRPICLFKLHEPVQVAHWQFSIVELPWPGEK--RYPH-EGWEH  117 (190)
T ss_dssp             TCEEEEEEEECSCHHHHHHHHHHHTTTEEEEEEEEETTEEEEEEEEEEEEEETTEEEEEEEEECCCSS--CCSS-CEEEE
T ss_pred             hccCcEEEEeeCCHHHHHHHHHHHHHhchhhhcCeeCCeeEEEEEcCCCceeCCcEEEEEEeCCCCCC--CCCC-CCceE
Confidence            3568999999999999999999988664332 11111111100    125567888999988766432  2222 36679


Q ss_pred             EEEEEC
Q 029285          148 TCIAIR  153 (196)
Q Consensus       148 i~f~v~  153 (196)
                      |-+.++
T Consensus       118 IElVlp  123 (190)
T d1k4na_         118 IEIVLP  123 (190)
T ss_dssp             EEEECC
T ss_pred             EEEEec
Confidence            999998

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.62  E-value=2.3  Score=28.97  Aligned_cols=58  Identities=14%  Similarity=0.196  Sum_probs=44.0

Q ss_pred             eeceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceeEEEE-eCCeEEEEEecCC
Q 029285           72 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLW-VGAEMIHLMELPN  131 (196)
Q Consensus        72 ~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~-~g~~~l~l~~~~~  131 (196)
                      ...++.|+++.+.|+++..+.+.+ .|.++.... ........+|+. .+|..+||++...
T Consensus       113 ~~~g~~h~~~~~~d~~~~~~~l~~-~Gv~~~~~p-~~g~~~~~~f~~DPdG~~IElvq~~~  171 (176)
T d1qipa_         113 DPRGFGHIGIAVPDVYSACKRFEE-LGVKFVKKP-DDGKMKGLAFIQDPDGYWIEILNPNK  171 (176)
T ss_dssp             SSCBEEEEEEECSCHHHHHHHHHH-TTCEEEECT-TSSSSTTCEEEECTTCCEEEEECTTT
T ss_pred             CccceeEEEeeHHHHHHHHHHHHH-CCCEEeeCC-ccCCceEEEEEECCCCCEEEEEeCCC
Confidence            346899999999999999999997 899988643 333334456665 4578999998654

>d1klla_ d.32.1.2 (A:) Mitomycin resistance protein D, MRD {Streptomyces lavendulae [TaxId: 1914]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Mitomycin resistance protein D, MRD
species: Streptomyces lavendulae [TaxId: 1914]

Probab=83.83  E-value=0.91  Score=29.35  Aligned_cols=49  Identities=14%  Similarity=0.147  Sum_probs=33.2

Q ss_pred             CceEEEEEECCHHHHHHHHHHCCCeEEeeCCCceEEEEEcCCCCeEEEE
Q 029285          144 RDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFT  192 (196)
Q Consensus       144 ~~~hi~f~v~dl~~~~~~l~~~G~~~~~~~~g~~~~~~~DPdG~~iEl~  192 (196)
                      .+.|+++.|.|+++..+..++.|..+.........+.+.-+++..+.+.
T Consensus         2 ri~hv~l~V~D~~~s~~FY~~Lg~~~~~~~~~~~~~~~~~~~~~~~~~~   50 (128)
T d1klla_           2 RISLFAVVVEDMAKSMEFYRKMGVEIPAEADSAPHTEAVLDGGIRLAWD   50 (128)
T ss_dssp             CCCEEEEEESCHHHHHHHHHHTTCCCCTTGGGCSEEEEECGGGCEEEEE
T ss_pred             eEeEEEEEcCCHHHHHHHHHHhCCccccccccccceeeeccceeeeeec
Confidence            4679999999999999988888877654433223344444555555543

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

Probab=83.14  E-value=1.8  Score=28.18  Aligned_cols=48  Identities=19%  Similarity=0.174  Sum_probs=33.6

Q ss_pred             CceEEEEEECCHHHHHHHHHH-CCCeEEeeCCCceEEEEE-cCCCCeEEEEe
Q 029285          144 RDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTR-DPDANALEFTQ  193 (196)
Q Consensus       144 ~~~hi~f~v~dl~~~~~~l~~-~G~~~~~~~~g~~~~~~~-DPdG~~iEl~e  193 (196)
                      ++.|++|.|+|++++.+...+ .|.++.....+  .++++ |-..+.+.+.+
T Consensus         4 ~l~hv~i~V~Dl~~s~~FY~~vLG~~~~~~~~~--~~~l~~~~~~~~l~l~~   53 (131)
T d1lgta1           4 SLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTDN--GDLFRIDSRAWRIAVQQ   53 (131)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCCEEEEEETT--EEEEESSSBSCSEEEEE
T ss_pred             cccEEEEEeCCHHHHHHHHHHhhCCceeecCCc--ceEEeecCCceEEEEec
Confidence            568999999999999999988 59988765443  24444 33344555543

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.03  E-value=1.7  Score=28.89  Aligned_cols=28  Identities=7%  Similarity=-0.011  Sum_probs=23.8

Q ss_pred             CceEEEEEECCHHHHHHHHH-HCCCeEEe
Q 029285          144 RDRHTCIAIRDVSKLKMILD-KAGISYTL  171 (196)
Q Consensus       144 ~~~hi~f~v~dl~~~~~~l~-~~G~~~~~  171 (196)
                      +++||+|.|+|++++.+... ..|.+...
T Consensus        11 ~~dHi~i~V~Dl~~a~~fY~~~lGf~~~~   39 (149)
T d1sqia1          11 HFHSVTFWVGNAKQAASFYCNKMGFEPLA   39 (149)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEEEE
T ss_pred             eEeEEEEEcCCHHHHHHHHhhccceEEEE
Confidence            67899999999999999885 57988754

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=82.57  E-value=2.3  Score=28.72  Aligned_cols=52  Identities=10%  Similarity=0.100  Sum_probs=35.7

Q ss_pred             CCceEEEEEECCHHHHHHHHHH-CCCeEEeeC----C-CceEEEEEcCCCCeEEEEee
Q 029285          143 GRDRHTCIAIRDVSKLKMILDK-AGISYTLSK----S-GRPAIFTRDPDANALEFTQV  194 (196)
Q Consensus       143 ~~~~hi~f~v~dl~~~~~~l~~-~G~~~~~~~----~-g~~~~~~~DPdG~~iEl~e~  194 (196)
                      .++.|++|.|.|++++.+...+ .|.+.....    . .....++....+..++|.+.
T Consensus         6 ~~idHv~i~V~D~~~a~~fY~~~lGf~~v~~~~~~~~~~~~~~~~l~~~~~~i~l~~~   63 (163)
T d1t47a1           6 KGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSARFVLTSV   63 (163)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEEE
T ss_pred             ceEeEEEEEeCCHHHHHHHHHHHhCCeEEeeecccccceeEEEEEEecCCEEEEEecc
Confidence            3688999999999999999986 798875431    1 12333444445666777664

>d1zswa2 d.32.1.10 (A:145-314) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=81.55  E-value=1.7  Score=29.88  Aligned_cols=32  Identities=13%  Similarity=0.150  Sum_probs=27.0

Q ss_pred             CCceEEEEEECCHHHHHHHHHH-CCCeEEeeCC
Q 029285          143 GRDRHTCIAIRDVSKLKMILDK-AGISYTLSKS  174 (196)
Q Consensus       143 ~~~~hi~f~v~dl~~~~~~l~~-~G~~~~~~~~  174 (196)
                      .|++||++.|.|+++..+...+ .|.++....+
T Consensus        11 ~Gl~HV~L~V~Dle~s~~FY~~vLG~~~~~~~~   43 (170)
T d1zswa2          11 QGMGSVELTVRRLDKMASTLTEIFGYTEVSRND   43 (170)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHHTTCCEEEEECS
T ss_pred             CCeeeEEEEeCCHHHHHHHHHHHhCCEEEeecC
Confidence            4789999999999999999887 7888866543

>d2g3aa1 d.108.1.1 (A:1-137) Probable acetyltransferase Atu2258 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Probable acetyltransferase Atu2258
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=81.27  E-value=1.6  Score=29.01  Aligned_cols=34  Identities=15%  Similarity=0.019  Sum_probs=25.9

Q ss_pred             ceeeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCC
Q 029285           74 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDK  109 (196)
Q Consensus        74 ~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~  109 (196)
                      .++.++.+.+.|.. ++.||+. +||+.....+...
T Consensus        92 ~g~~~i~l~~~n~~-a~~fY~k-~GF~~~g~~~~~~  125 (137)
T d2g3aa1          92 RGCMGAYIDTMNPD-ALRTYER-YGFTKIGSLGPLS  125 (137)
T ss_dssp             TTCCEEEEEESCHH-HHHHHHH-HTCEEEEEECCCT
T ss_pred             cCCceEEEecccHh-hHHHHHh-CCCEEEEEECCCC
Confidence            35567788888764 7999999 8999998766433

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=81.22  E-value=3.5  Score=26.79  Aligned_cols=56  Identities=9%  Similarity=0.067  Sum_probs=34.4

Q ss_pred             eceeeEEEEEcCCHHH---HHHHHHhccCCEEeeecCCCCCCceeEEEEe-CCeEEEEEecCC
Q 029285           73 VVSVHHVGILCENLER---SLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPN  131 (196)
Q Consensus        73 i~~l~hv~l~v~Dl~~---a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~-g~~~l~l~~~~~  131 (196)
                      ..+++|+++.|.|.+.   ..+-..+ .|..+.....  .......|+.- +|..++|++...
T Consensus        75 ~~~~~Hiaf~v~~~~~l~~~~~~l~~-~gv~~~~~~~--~~~~~~~yf~DPdG~~iEl~~~~~  134 (144)
T d1zswa1          75 TNAITRIGLLVPSEDSLHYWKERFEK-FDVKHSEMTT--YANRPALQFEDAEGLRLVLLVSNG  134 (144)
T ss_dssp             BSEEEEEEEEESCHHHHHHHHHHHHH-TTCEECCSEE--ETTEEEEEEECTTCCEEEEEECTT
T ss_pred             CCceeEEEEecCCchhHHHHhhhhhc-cceeeeCccc--cCCeEEEEEECCCCCEEEEEEeCC
Confidence            3468999999999544   4444444 7877643222  12233445544 477999987654