Citrus Sinensis ID: 029289

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190------
Protein Sequence
MQVGNALTDDYHDYLGLFQFWWSAGLISDDTYKQLKLLCDYESFIHPSCTASVSQSNRLLKRMHVVGHASEKYDPCTEKHSVVYFNQPEVQKALHVIPAVALAKWETCRWHQQHALMIFFIFTALQWGVVNNNWLDSPRIVLDIYHELIHSGLRIWMFSGDTDAVIPVTSARYSIDALNLPTVKPWRAWYDEGQVG
Secondary Structure (PSIPRED)
cEEccccccccccccHHHHHHHHHccccHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHccccccccccccccccHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHcccEEEEEEccccccccHHcHHHHHHHccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccEEEEccEHHHHHHHHHHHHHccccccHHHHHHHHHHHcccccccccHHHHHHHHHHHHccccccccccccccccHHHHHHHHcccHHHHHHHccccccccccccccccccccccccccccccccccHHHHcccccccEcHHHHHHHHHcccEEEEEEEcccccccHHHHHHHHHcccccEEEEEEEEEEccEEE
Coil and Loop (DISEMBL)
mqvgnaltddYHDYLGLFQFwwsaglisddtYKQLKLLCDyesfihpsctasVSQSNRLLKRMHvvghasekydpctekhsvvyfnqpevqkALHVIPAVALAKWETCRWHQQHALMIFFIFTALQWgvvnnnwldsprIVLDIYHELIHSGLRIwmfsgdtdavipvtsarysidalnlptvkpwrawydegqvg
Flexible Loop (DISEMBL)
MQVGNALTDDYHDYLGLFQFWWSAGLISDDTYKQLKLLCDYESFIHPSCTASVSQSNRLLKRMHVVGHASEKYDPCTEKHSVVYFNQPEVQKALHVIPAVALAKWETCRWHQQHALMIFFIFTALQWGVVNNNWLDSPRIVLDIYHELIHSGLRIWMFSGDTDAVIPVTSArysidalnlptvkpwrawydegqvg
Low Complexity Region (SEG)
MQVGNALTDDYHDYLGLFQFWWSAGLISDDTYKQLKLLCDYESFIHPSCTASVSQSNRLLKRMHVVGHASEKYDPCTEKHSVVYFNQPEVQKALHVIPAVALAKWETCRWHQQHALMIFFIFTALQWGVVNNNWLDSPRIVLDIYHELIHSGLRIWMFSGDTDAVIPVTSARYSIDALNLPTVKPWRAWYDEGQVG
Disordered region (IsUnstruct)
******LTDDYHDYLGLFQFWWSAGLISDDTYKQLKLLCDYESFIHPSCTASVSQSNRLLKRMHVVGHASEKYDPCTEKHSVVYFNQPEVQKALHVIPAVALAKWETCRWHQQHALMIFFIFTALQWGVVNNNWLDSPRIVLDIYHELIHSGLRIWMFSGDTDAVIPVTSARYSIDALNLPTVKPWRAWYD*****
Disordered Region (DISOPRED)
MQVGNALTDDYHDYLGLFQFWWSAGLISDDTYKQLKLLCDYESFIHPSCTASVSQSNRLLKRMHVVGHASEKYDPCTEKHSVVYFNQPEVQKALHVIPAVALAKWETCRWHQQHALMIFFIFTALQWGVVNNNWLDSPRIVLDIYHELIHSGLRIWMFSGDTDAVIPVTSARYSIDALNLPTVKPWRAWYDEGQVG
Disordered Region (DISEMBL)
MQVGNALTDDYHDYLGLFQFWWSAGLISDDTYKQLKLLCDYESFIHPSCTASVSQSNRLLKRMHVVGHASEKYDPCTEKHSVVYFNQPEVQKALHVIPAVALAKWETCRWHQQHALMIFFIFTALQWGVVNNNWLDSPRIVLDIYHELIHSGLRIWMFSGDTDAVIPVTSARYSIDALNLPTVKPWRAWYDEGQVG
Disordered Region (DISPRO)
MQVGNALTDDYHDYLGLFQFWWSAGLISDDTYKQLKLLCDYESFIHPSCTASVSQSNRLLKRMHVVGHASEKYDPCTEKHSVVYFNQPEVQKALHVIPAVALAKWETCRWHQQHALMIFFIFTALQWGVVNNNWLDSPRIVLDIYHELIHSGLRIWMFSGDTDAVIPVTSARYSIDALNLPTVKPWRAWYDEGQVG
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhoooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MQVGNALTDDYHDYLGLFQFWWSAGLISDDTYKQLKLLCDYESFIHPSCTASVSQSNRLLKRMHVVGHASEKYDPCTEKHSVVYFNQPEVQKALHVIPAVALAKWETCRWHQQHALMIFFIFTALQWGVVNNNWLDSPRIVLDIYHELIHSGLRIWMFSGDTDAVIPVTSARYSIDALNLPTVKPWRAWYDEGQVG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	196	2.2.26 [Sep-21-2011]
P55748	436	Serine carboxypeptidase I	N/A	no	0.897	0.403	0.536	4e-60
Q949Q7	479	Serine carboxypeptidase-l	yes	no	0.897	0.367	0.513	2e-56
Q9SFB5	459	Serine carboxypeptidase-l	no	no	0.897	0.383	0.428	4e-42
P08819	444	Serine carboxypeptidase 2	N/A	no	0.908	0.400	0.410	1e-41
Q9ZQQ0	452	Serine carboxypeptidase-l	no	no	0.897	0.389	0.438	2e-41
P55747	324	Serine carboxypeptidase I	N/A	no	0.887	0.537	0.404	1e-40
P08818	476	Serine carboxypeptidase 2	N/A	no	0.887	0.365	0.405	4e-39
O82229	454	Putative serine carboxype	no	no	0.882	0.381	0.374	1e-33
Q8L9Y0	473	Serine carboxypeptidase-l	no	no	0.908	0.376	0.356	2e-33
Q9M099	465	Serine carboxypeptidase 2	no	no	0.872	0.367	0.352	8e-33

>sp|P55748|CBP22_HORVU Serine carboxypeptidase II-2 (Fragment) OS=Hordeum vulgare GN=CXP;2-2 PE=1 SV=1

 Score =  230 bits (587), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 119/222 (53%), Positives = 141/222 (63%), Gaps = 46/222 (20%)

Query: 3   VGNALTDDYHDYLGLFQFWWSAGLISDDTYKQLKLLCDYESFIH---------------- 46
           VGNALTDD+HD+ G+FQ+ W+ GLISD TYK L + CD+ESF+H                
Sbjct: 181 VGNALTDDFHDHYGIFQYMWTTGLISDQTYKLLNIFCDFESFVHTSPQCDKILDIASTEA 240

Query: 47  ----------PSCTASVSQS-NRLLKRMHVVGHASEKYDPCTEKHSVVYFNQPEVQKALH 95
                     P+C +S + S N+++KR+  VG   E+YDPCTEKHS+VYFN  EVQKALH
Sbjct: 241 GNIDSYSIFTPTCHSSFASSRNKVVKRLRSVGKMGEQYDPCTEKHSIVYFNLHEVQKALH 300

Query: 96  VIPAVALAKWETCRWHQQHALMIFFIFTALQWGVVNNNWLDSPRIVLDIYHELIHSGLRI 155
           V P +  +KWETC                    V+N NW D  R VL IYHELI  GLRI
Sbjct: 301 VNPVIGKSKWETCS------------------EVINTNWKDCERSVLHIYHELIQYGLRI 342

Query: 156 WMFSGDTDAVIPVTSARYSIDALNLPTVKPWRAWY-DEGQVG 196
           WMFSGDTDAVIPVTS RYSIDAL LPTV PW AWY D+G+VG
Sbjct: 343 WMFSGDTDAVIPVTSTRYSIDALKLPTVTPWHAWYDDDGEVG 384

Hordeum vulgare (taxid: 4513)
EC: 3EC: .EC: 4EC: .EC: 1EC: 6EC: .EC: 6

>sp|Q949Q7|SCP29_ARATH Serine carboxypeptidase-like 29 OS=Arabidopsis thaliana GN=SCPL29 PE=2 SV=1

 Score =  218 bits (555), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 113/220 (51%), Positives = 135/220 (61%), Gaps = 44/220 (20%)

Query: 3   VGNALTDDYHDYLGLFQFWWSAGLISDDTYKQLKLLCDYESFIH---------------- 46
           VGN L DD+HD LGLFQ+ WS G ISD TY  L+L C +ESFIH                
Sbjct: 218 VGNGLMDDFHDRLGLFQYIWSLGFISDQTYSLLQLQCGFESFIHSSKQCNKILEIADKEI 277

Query: 47  ----------PSCTASVSQSNRLLKRMHVVGHASEKYDPCTEKHSVVYFNQPEVQKALHV 96
                     P+C A+ SQSN LLK+  +    SE+YDPCTEKH+ VYFN PEVQKALHV
Sbjct: 278 GNIDQYSVFTPACVANASQSNMLLKKRPMTSRVSEQYDPCTEKHTTVYFNLPEVQKALHV 337

Query: 97  IPAVALAKWETCRWHQQHALMIFFIFTALQWGVVNNNWLDSPRIVLDIYHELIHSGLRIW 156
            P +A +KW+TC                    VV+ +W DSP  VL+IYHELI +GLRIW
Sbjct: 338 PPGLAPSKWDTCS------------------DVVSEHWNDSPSSVLNIYHELIAAGLRIW 379

Query: 157 MFSGDTDAVIPVTSARYSIDALNLPTVKPWRAWYDEGQVG 196
           +FSGD DAV+PVTS RYSIDALNL  +  +  WY +GQVG
Sbjct: 380 VFSGDADAVVPVTSTRYSIDALNLRPLSAYGPWYLDGQVG 419

Probable carboxypeptidase.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 4

EC: .

EC: 1

EC: 6

EC: .

EC: -

>sp|Q9SFB5|SCP27_ARATH Serine carboxypeptidase-like 27 OS=Arabidopsis thaliana GN=SCPL27 PE=2 SV=1

 Score =  171 bits (432), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 93/217 (42%), Positives = 122/217 (56%), Gaps = 41/217 (18%)

Query: 3   VGNALTDDYHDYLGLFQFWWSAGLISDDTYKQLKLLCDYESFIHPSCTASVSQSNRLLKR 62
           VGNA+TDDYHDY+G F++WW+ GLISD TY QLK  C   S  HPS    V+  N  L++
Sbjct: 216 VGNAVTDDYHDYIGTFEYWWNHGLISDSTYHQLKTACYSVSSQHPSMQCMVALRNAELEQ 275

Query: 63  MHVVGHA-----------------------SEKYDPCTEKHSVVYFNQPEVQKALHVIPA 99
            ++  ++                       S  YDPCTE++S VYFN+ +VQKALH    
Sbjct: 276 GNIDPYSIFTKPCNSTVALKRFLKGRYPWMSRAYDPCTERYSNVYFNRLDVQKALHANVT 335

Query: 100 VALAKWETCRWHQQHALMIFFIFTALQWGVVNNNWLDSPRIVLDIYHELIHSGLRIWMFS 159
                W+ C                    +V + W DSP  +L IY ELI +GL+IW+FS
Sbjct: 336 RLSYPWKACS------------------DIVGSYWDDSPLSMLPIYKELITAGLKIWVFS 377

Query: 160 GDTDAVIPVTSARYSIDALNLPTVKPWRAWYDEGQVG 196
           GDTDAV+P+T+ RYS+DAL L T+  W  WYD G+VG
Sbjct: 378 GDTDAVVPITATRYSVDALKLATITNWYPWYDHGKVG 414

Probable carboxypeptidase.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 4

EC: .

EC: 1

EC: 6

EC: .

EC: -

>sp|P08819|CBP2_WHEAT Serine carboxypeptidase 2 OS=Triticum aestivum GN=CBP2 PE=1 SV=2

 Score =  169 bits (427), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 94/229 (41%), Positives = 125/229 (54%), Gaps = 51/229 (22%)

Query: 1   MQVGNALTDDYHDYLGLFQFWWSAGLISDDTYKQLKLLCDYESFIHPS--C-----TASV 53
             VGN L DDYHDY+G F+FWW+ G++SDDTY++LK  C ++SFIHPS  C      A+ 
Sbjct: 184 FMVGNGLIDDYHDYVGTFEFWWNHGIVSDDTYRRLKEACLHDSFIHPSPACDAATDVATA 243

Query: 54  SQSNRLLKRMHV----------------------VGH---ASEKYDPCTEKHSVVYFNQP 88
            Q N  +  ++                        G     +  YDPCTE++S  Y+N+ 
Sbjct: 244 EQGNIDMYSLYTPVCNITSSSSSSSSSLSQQRRSRGRYPWLTGSYDPCTERYSTAYYNRR 303

Query: 89  EVQKALHVIPAVALA-KWETCRWHQQHALMIFFIFTALQWGVVNNNWLDSPRIVLDIYHE 147
           +VQ ALH     A+   W TC                     +N +W D+PR +L IY E
Sbjct: 304 DVQMALHANVTGAMNYTWATCS------------------DTINTHWHDAPRSMLPIYRE 345

Query: 148 LIHSGLRIWMFSGDTDAVIPVTSARYSIDALNLPTVKPWRAWYDEGQVG 196
           LI +GLRIW+FSGDTDAV+P+T+ RYSI AL LPT   W  WYD+ +VG
Sbjct: 346 LIAAGLRIWVFSGDTDAVVPLTATRYSIGALGLPTTTSWYPWYDDQEVG 394

Triticum aestivum (taxid: 4565)

EC: 3

EC: .

EC: 4

EC: .

EC: 1

EC: 6

EC: .

EC: 6

>sp|Q9ZQQ0|SCP26_ARATH Serine carboxypeptidase-like 26 OS=Arabidopsis thaliana GN=SCPL26 PE=2 SV=1

 Score =  168 bits (426), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 96/219 (43%), Positives = 119/219 (54%), Gaps = 43/219 (19%)

Query: 3   VGNALTDDYHDYLGLFQFWWSAGLISDDTYKQLKLLCDYESFIHPS--CT-----ASVSQ 55
           VGNA+ DDYHDY+GLF++WW+ GLISD TY  L++ C++ S  HPS  CT     A + Q
Sbjct: 208 VGNAVIDDYHDYVGLFEYWWAHGLISDLTYHNLRITCEFGSSEHPSSKCTKAMEAADLEQ 267

Query: 56  SN----------------RLLKRMHVVGHAS--EKYDPCTEKHSVVYFNQPEVQKALHVI 97
            N                 L  R   V H      YDPCTEK+S +YFN PEVQKA+H  
Sbjct: 268 GNIDPYSIYTVTCKKEAAALRSRFSRVRHPWMWRAYDPCTEKYSGMYFNSPEVQKAMHAN 327

Query: 98  PAVALAKWETCRWHQQHALMIFFIFTALQWGVVNNNWLDSPRIVLDIYHELIHSGLRIWM 157
                  W+ C                    +V   W DSP  +L IY ELI +GLRIW+
Sbjct: 328 ITGLAYPWKGCS------------------DIVGEKWADSPLSMLPIYKELIAAGLRIWV 369

Query: 158 FSGDTDAVIPVTSARYSIDALNLPTVKPWRAWYDEGQVG 196
           FSGDTD+V+P+T  RYSI AL L  +  W  W D+GQVG
Sbjct: 370 FSGDTDSVVPITGTRYSIRALKLQPLSKWYPWNDDGQVG 408

Probable carboxypeptidase.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 4

EC: .

EC: 1

EC: 6

EC: .

EC: -

>sp|P55747|CBP21_HORVU Serine carboxypeptidase II-1 (Fragment) OS=Hordeum vulgare GN=CXP;2-1 PE=1 SV=1

 Score =  166 bits (420), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 89/220 (40%), Positives = 120/220 (54%), Gaps = 46/220 (20%)

Query: 3   VGNALTDDYHDYLGLFQFWWSAGLISDDTYKQLKLLCDYESFIH---------------- 46
           VGNA+ DDYHD++G F++WW+ GLISDDTY++L+L C+++S  H                
Sbjct: 73  VGNAVIDDYHDFVGTFEYWWTHGLISDDTYQKLQLACEFDSAEHESEACNKINNVAEAEE 132

Query: 47  ----------PSCTASVSQSNRLLKRMHVVGHASEKYDPCTEKHSVVYFNQPEVQKALHV 96
                     P+C  +     RL+K           YDPCTE++S  Y+N PEVQKA   
Sbjct: 133 GLIDAYSIYTPTCKKTSLHRRRLIKGRRPW--LPRGYDPCTEQYSTKYYNLPEVQKAFRA 190

Query: 97  IPAVALAKWETCRWHQQHALMIFFIFTALQWGVVNNNWLDSPRIVLDIYHELIHSGLRIW 156
                   W  C                    V++++W DSPR +L IY ELI +G+RIW
Sbjct: 191 NVTGIPYSWTACS------------------DVLSDHWKDSPRSMLPIYRELIAAGIRIW 232

Query: 157 MFSGDTDAVIPVTSARYSIDALNLPTVKPWRAWYDEGQVG 196
           +FSGD D+V+P+T+ RYSIDAL LPTV  W  WYDE +V 
Sbjct: 233 VFSGDADSVVPLTATRYSIDALYLPTVTNWYPWYDEEEVA 272

Hordeum vulgare (taxid: 4513)

EC: 3

EC: .

EC: 4

EC: .

EC: 1

EC: 6

EC: .

EC: 6

>sp|P08818|CBP2_HORVU Serine carboxypeptidase 2 OS=Hordeum vulgare GN=CBP2 PE=1 SV=2

 Score =  160 bits (406), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 90/222 (40%), Positives = 120/222 (54%), Gaps = 48/222 (21%)

Query: 3   VGNALTDDYHDYLGLFQFWWSAGLISDDTYKQLKLLCDYESFIHPS--C-----TASVSQ 55
           VGN L DDYHDY+G F+FWW+ G++SDDTY++LK  C ++SFIHPS  C      A+  Q
Sbjct: 218 VGNGLIDDYHDYVGTFEFWWNHGIVSDDTYRRLKDACLHDSFIHPSPACDAATDVATAEQ 277

Query: 56  SNRLLKRMHV----------------------VGHASEKYDPCTEKHSVVYFNQPEVQKA 93
            N  +  ++                           +  YDPCTE++S  Y+N+ +VQ A
Sbjct: 278 GNIDMYSLYTPVCNISSSSSSSSLSRRRTRGRYPWLTGSYDPCTERYSTAYYNRRDVQTA 337

Query: 94  LHVIPAVALA-KWETCRWHQQHALMIFFIFTALQWGVVNNNWLDSPRIVLDIYHELIHSG 152
           LH     A+   W  C                     +N +W D+PR +L IY ELI +G
Sbjct: 338 LHANVTGAMNYTWTNCS------------------DTINTHWHDAPRSMLPIYRELIAAG 379

Query: 153 LRIWMFSGDTDAVIPVTSARYSIDALNLPTVKPWRAWYDEGQ 194
           LRIW+FSGDTDAV+P+T+ RYSI AL L T   W  WYD+ Q
Sbjct: 380 LRIWVFSGDTDAVVPLTATRYSIGALGLATTTSWYPWYDDLQ 421

May be involved in the degradation of small peptides (2-5 residues) or in the degradation of storage proteins in the embryo.

Hordeum vulgare (taxid: 4513)

EC: 3

EC: .

EC: 4

EC: .

EC: 1

EC: 6

EC: .

EC: 6

>sp|O82229|SCP23_ARATH Putative serine carboxypeptidase-like 23 OS=Arabidopsis thaliana GN=SCPL23 PE=2 SV=2

 Score =  142 bits (358), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 82/219 (37%), Positives = 107/219 (48%), Gaps = 46/219 (21%)

Query: 3   VGNALTDDYHDYLGLFQFWWSAGLISDDTYKQLKLLCDYE-------------------- 42
           VGN   D ++D LG   + WS  +ISD TYK +   C +                     
Sbjct: 211 VGNGDMDKHYDRLGAAMYAWSHAMISDKTYKSILKHCSFTADKTSDKCNWALYFAYREFG 270

Query: 43  -----SFIHPSCTASVSQSNRLLKRMHVVGHASEKYDPCTEKHSVVYFNQPEVQKALHVI 97
                S   PSC    +Q+  L  R+ V  +   +YDPCTE ++ +Y+N+P+VQ+A+H  
Sbjct: 271 KVNGYSIYSPSCVHQTNQTKFLHGRLLVEEY---EYDPCTESYAEIYYNRPDVQRAMHAN 327

Query: 98  PAVALAKWETCRWHQQHALMIFFIFTALQWGVVNNNWLDSPRIVLDIYHELIHSGLRIWM 157
                 KW  C                    VVNNNW DS   +L IY EL  +GLRIW+
Sbjct: 328 LTSIPYKWTLCNM------------------VVNNNWKDSEFSMLPIYKELTAAGLRIWV 369

Query: 158 FSGDTDAVIPVTSARYSIDALNLPTVKPWRAWYDEGQVG 196
           FSGDTDAV+PVT  R ++  LNLP   PW  WY E QVG
Sbjct: 370 FSGDTDAVVPVTGTRLALSKLNLPVKTPWYPWYSEKQVG 408

Probable carboxypeptidase.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 4

EC: .

EC: 1

EC: 6

EC: .

EC: -

>sp|Q8L9Y0|SCP25_ARATH Serine carboxypeptidase-like 25 OS=Arabidopsis thaliana GN=SCPL25 PE=2 SV=2

 Score =  141 bits (356), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 83/233 (35%), Positives = 112/233 (48%), Gaps = 55/233 (23%)

Query: 1   MQVGNALTDDYHDYLGLFQFWWSAGLISDDTYKQLKLLCDYE------------------ 42
           + VGNA+TD+++D LG   +WWS  +ISD TY QL   CD+                   
Sbjct: 214 IMVGNAVTDNHYDNLGTVSYWWSHAMISDRTYHQLISTCDFSRQKESDECETLYSYAMEQ 273

Query: 43  --------SFIHPSCTASV-----------SQSNRLLKRMHVVGHASEKYDPCTEKHSVV 83
                   +   P C  S             +S RL    H V      YDPCTE+++ +
Sbjct: 274 EFGNIDQYNIYAPPCNKSSDGGGSYNGSSGRRSMRLPHLPHSVLRKISGYDPCTERYAEI 333

Query: 84  YFNQPEVQKALHVIPAVALAKWETCRWHQQHALMIFFIFTALQWGVVNNNWLDSPRIVLD 143
           Y+N+P+VQKALH        KW  C                    V+N NW D+   VL 
Sbjct: 334 YYNRPDVQKALHANTTKIPYKWTACS------------------EVLNRNWNDTDSTVLP 375

Query: 144 IYHELIHSGLRIWMFSGDTDAVIPVTSARYSIDALNLPTVKPWRAWYDEGQVG 196
           IY E+I  G+R+W+FSGD D+V+PVT+ RYS+  L+L T  PW  WY + QVG
Sbjct: 376 IYREMIAGGIRVWVFSGDVDSVVPVTATRYSLARLSLSTKLPWYPWYVKKQVG 428

Probable carboxypeptidase.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 4

EC: .

EC: 1

EC: 6

EC: .

EC: -

>sp|Q9M099|SCP24_ARATH Serine carboxypeptidase 24 OS=Arabidopsis thaliana GN=SCPL24 PE=1 SV=1

 Score =  140 bits (352), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 81/230 (35%), Positives = 111/230 (48%), Gaps = 59/230 (25%)

Query: 3   VGNALTDDYHDYLGLFQFWWSAGLISDDTYKQLKLLCDYE-------------------- 42
           VGNA+TD+ +D +G   +WW+  +ISD +YK +   C++                     
Sbjct: 213 VGNAVTDNQYDSIGTVTYWWTHAIISDKSYKSILKYCNFTVERVSDDCDNAVNYAMNHEF 272

Query: 43  ------SFIHPSCTAS----------VSQSNRLLKRMHVVGHASEKYDPCTEKHSVVYFN 86
                 S   P+C A+          V   N LL+R  V G     YDPCTE ++  YFN
Sbjct: 273 GDIDQYSIYTPTCVAAQQKKNTTGFFVRMKNTLLRRRLVSG-----YDPCTESYAEKYFN 327

Query: 87  QPEVQKALHVIPAVALAKWETCRWHQQHALMIFFIFTALQWGVVNNNWLDSPRIVLDIYH 146
           +P+VQ+A+H        KW  C                    V+   W DS + +L IY 
Sbjct: 328 RPDVQRAMHANVTGIRYKWTACS------------------DVLIKTWKDSDKTMLPIYK 369

Query: 147 ELIHSGLRIWMFSGDTDAVIPVTSARYSIDALNLPTVKPWRAWYDEGQVG 196
           EL  SGLRIW+FSGDTD+V+PVT+ R+S+  LNLP    W  WY + QVG
Sbjct: 370 ELAASGLRIWIFSGDTDSVVPVTATRFSLSHLNLPVKTRWYPWYTDNQVG 419

Active serine carboxypeptidase with broad substrate preference, including basic and hydrophilic groups. Processes a protein involved in an early event in the brassinosteroid signaling pathway.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 4

EC: .

EC: 1

EC: 6

EC: .

EC: 6

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	196
255574994	480	serine carboxypeptidase, putative [Ricin	0.897	0.366	0.609	3e-68
224142347	470	predicted protein [Populus trichocarpa]	0.913	0.380	0.612	2e-62
147835717	524	hypothetical protein VITISV_014887 [Viti	0.897	0.335	0.540	3e-61
357124998	474	PREDICTED: serine carboxypeptidase II-2-	0.897	0.371	0.549	3e-61
225445780	469	PREDICTED: serine carboxypeptidase II-2	0.897	0.375	0.540	4e-61
449453952	468	PREDICTED: serine carboxypeptidase-like	0.897	0.376	0.532	3e-59
356508384	469	PREDICTED: serine carboxypeptidase II-2-	0.897	0.375	0.542	2e-58
2493494	436	RecName: Full=Serine carboxypeptidase II	0.897	0.403	0.536	2e-58
115466820	484	Os06g0186400 [Oryza sativa Japonica Grou	0.897	0.363	0.536	4e-58
449506219	468	PREDICTED: serine carboxypeptidase-like	0.897	0.376	0.527	5e-58

>gi|255574994|ref|XP_002528403.1| serine carboxypeptidase, putative [Ricinus communis] gi|223532191|gb|EEF33996.1| serine carboxypeptidase, putative [Ricinus communis]

 Score =  263 bits (671), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 134/220 (60%), Positives = 147/220 (66%), Gaps = 44/220 (20%)

Query: 3   VGNALTDDYHDYLGLFQFWWSAGLISDDTYKQLKLLCDYESFIH---------------- 46
           VGNALTDDYHD+LG+F+F W+AGLISD TYK+L L CD++SFIH                
Sbjct: 228 VGNALTDDYHDHLGIFEFMWAAGLISDQTYKKLNLFCDFQSFIHSSDSCDKILDIASEEL 287

Query: 47  ----------PSCTASVSQSNRLLKRMHVVGHASEKYDPCTEKHSVVYFNQPEVQKALHV 96
                     P CTA+VS SNRLLK MH VG   EKYDPCTE HS VYFN PEVQKALHV
Sbjct: 288 GNIDPYSIYTPPCTANVSGSNRLLKTMHKVGRVYEKYDPCTEAHSTVYFNLPEVQKALHV 347

Query: 97  IPAVALAKWETCRWHQQHALMIFFIFTALQWGVVNNNWLDSPRIVLDIYHELIHSGLRIW 156
               A +KWETC                    +VNNNW DSPR VLDIYHELIHSG+RIW
Sbjct: 348 SKEFAPSKWETCS------------------DLVNNNWKDSPRTVLDIYHELIHSGIRIW 389

Query: 157 MFSGDTDAVIPVTSARYSIDALNLPTVKPWRAWYDEGQVG 196
           +FSGDTDAVIPVTS RYSIDAL L T KPW AWYD+ QVG
Sbjct: 390 VFSGDTDAVIPVTSTRYSIDALKLRTTKPWHAWYDDRQVG 429

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224142347|ref|XP_002324520.1| predicted protein [Populus trichocarpa] gi|222865954|gb|EEF03085.1| predicted protein [Populus trichocarpa]

 Score =  243 bits (621), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 128/209 (61%), Positives = 142/209 (67%), Gaps = 30/209 (14%)

Query: 3   VGNALTDDYHDYLGLFQFWWSAGLISDDTYKQLKLLCDYESFIHPS--CTASVSQSNRLL 60
           VGNALTDDYHD+LGLFQF W+AGLISD TYK+L LLCD+ESFIH S  C      + + L
Sbjct: 226 VGNALTDDYHDHLGLFQFMWAAGLISDQTYKKLNLLCDFESFIHSSVACDKMEDIATKEL 285

Query: 61  KRM------------HVVGHASEKYDPCTEKHSVVYFNQPEVQKALHVIPAVALAKWETC 108
             +            + VG  SEKYDPCTE H+ VYFN PEVQKALHV P  A A+WETC
Sbjct: 286 GNIDPYSIFTPSCSANRVGRVSEKYDPCTETHTTVYFNLPEVQKALHVSPEFAPARWETC 345

Query: 109 RWHQ-QHALMIFFIFTALQWGVVNNNWLDSPRIVLDIYHELIHSGLRIWMFSGDTDAVIP 167
           R     H L + F               DSPR VLDIY ELIHSGL +W+FSGDTDAVIP
Sbjct: 346 RGATCPHHLTLIF---------------DSPRTVLDIYKELIHSGLHVWVFSGDTDAVIP 390

Query: 168 VTSARYSIDALNLPTVKPWRAWYDEGQVG 196
           VTS RYSIDAL LPTVKPW AWYD+GQVG
Sbjct: 391 VTSTRYSIDALKLPTVKPWGAWYDDGQVG 419

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147835717|emb|CAN75200.1| hypothetical protein VITISV_014887 [Vitis vinifera]

 Score =  239 bits (611), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 119/220 (54%), Positives = 143/220 (65%), Gaps = 44/220 (20%)

Query: 3   VGNALTDDYHDYLGLFQFWWSAGLISDDTYKQLKLLCDYESFIH---------------- 46
           VGNALTDD+HD+LG+FQF WSAG+ISD TYK L + CD++ FIH                
Sbjct: 272 VGNALTDDFHDHLGVFQFMWSAGMISDQTYKLLNVFCDFQPFIHSSASCDKIMDIASEEM 331

Query: 47  ----------PSCTASVSQSNRLLKRMHVVGHASEKYDPCTEKHSVVYFNQPEVQKALHV 96
                     P C+  V  SN+L+KR+  VG  SE+YDPCTE+HSVVY+N PEVQ+ALHV
Sbjct: 332 GNVDPYSIFTPPCSVKVGFSNQLMKRLIRVGRISERYDPCTEQHSVVYYNLPEVQQALHV 391

Query: 97  IPAVALAKWETCRWHQQHALMIFFIFTALQWGVVNNNWLDSPRIVLDIYHELIHSGLRIW 156
               A +KW TC                     V+  W DSP+ VLD+Y ELIH+GLRIW
Sbjct: 392 YTDNAPSKWATCSDE------------------VSATWKDSPKTVLDVYRELIHAGLRIW 433

Query: 157 MFSGDTDAVIPVTSARYSIDALNLPTVKPWRAWYDEGQVG 196
           +FSGDTDA+IPVTS RYS+DAL LPTV PWRAWYD+GQVG
Sbjct: 434 IFSGDTDAIIPVTSTRYSVDALKLPTVGPWRAWYDDGQVG 473

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357124998|ref|XP_003564183.1| PREDICTED: serine carboxypeptidase II-2-like isoform 1 [Brachypodium distachyon]

 Score =  239 bits (611), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 122/222 (54%), Positives = 145/222 (65%), Gaps = 46/222 (20%)

Query: 3   VGNALTDDYHDYLGLFQFWWSAGLISDDTYKQLKLLCDYESFIH---------------- 46
           VGNALTDD+HD+ G+FQ+ W+ GLISD+TYK L + CD+ESFIH                
Sbjct: 219 VGNALTDDFHDHYGIFQYMWTTGLISDNTYKLLNIFCDFESFIHSSPQCDKILDIASTEA 278

Query: 47  ----------PSCTASVSQS-NRLLKRMHVVGHASEKYDPCTEKHSVVYFNQPEVQKALH 95
                     P+C +S + S N+++KR+  VG   E+YDPCTEKHS+VYFN  EVQKALH
Sbjct: 279 GNIDSYSIFTPTCHSSFASSRNKVMKRLRSVGKMGEQYDPCTEKHSIVYFNLAEVQKALH 338

Query: 96  VIPAVALAKWETCRWHQQHALMIFFIFTALQWGVVNNNWLDSPRIVLDIYHELIHSGLRI 155
           V P +  +KWETC                   GV+NNNW DS R VL IYHELI  GLRI
Sbjct: 339 VNPVIGKSKWETCS------------------GVINNNWGDSERSVLHIYHELIQYGLRI 380

Query: 156 WMFSGDTDAVIPVTSARYSIDALNLPTVKPWRAWY-DEGQVG 196
           WMFSGDTDAVIPVTS RYSI+AL LPTV PW AWY D+G+VG
Sbjct: 381 WMFSGDTDAVIPVTSTRYSINALKLPTVAPWHAWYDDDGEVG 422

Source: Brachypodium distachyon

Species: Brachypodium distachyon

Genus: Brachypodium

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225445780|ref|XP_002275081.1| PREDICTED: serine carboxypeptidase II-2 [Vitis vinifera] gi|297743690|emb|CBI36573.3| unnamed protein product [Vitis vinifera]

 Score =  239 bits (610), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 119/220 (54%), Positives = 143/220 (65%), Gaps = 44/220 (20%)

Query: 3   VGNALTDDYHDYLGLFQFWWSAGLISDDTYKQLKLLCDYESFIH---------------- 46
           VGNALTDD+HD+LG+FQF WSAG+ISD TYK L + CD++ FIH                
Sbjct: 217 VGNALTDDFHDHLGVFQFMWSAGMISDQTYKLLNVFCDFQPFIHSSASCDKIMDIASEEM 276

Query: 47  ----------PSCTASVSQSNRLLKRMHVVGHASEKYDPCTEKHSVVYFNQPEVQKALHV 96
                     P C+  V  SN+L+KR+  VG  SE+YDPCTE+HSVVY+N PEVQ+ALHV
Sbjct: 277 GNVDPYSIFTPPCSVKVGFSNQLMKRLIRVGRISERYDPCTEQHSVVYYNLPEVQQALHV 336

Query: 97  IPAVALAKWETCRWHQQHALMIFFIFTALQWGVVNNNWLDSPRIVLDIYHELIHSGLRIW 156
               A +KW TC                     V+  W DSP+ VLD+Y ELIH+GLRIW
Sbjct: 337 YTDNAPSKWATCS------------------DEVSATWKDSPKTVLDVYRELIHAGLRIW 378

Query: 157 MFSGDTDAVIPVTSARYSIDALNLPTVKPWRAWYDEGQVG 196
           +FSGDTDA+IPVTS RYS+DAL LPTV PWRAWYD+GQVG
Sbjct: 379 IFSGDTDAIIPVTSTRYSVDALKLPTVGPWRAWYDDGQVG 418

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449453952|ref|XP_004144720.1| PREDICTED: serine carboxypeptidase-like 29-like [Cucumis sativus]

 Score =  233 bits (594), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 116/218 (53%), Positives = 139/218 (63%), Gaps = 42/218 (19%)

Query: 3   VGNALTDDYHDYLGLFQFWWSAGLISDDTYKQLKLLCDYESFIHPSCTA----------- 51
           VGNAL DD+HD++G+F+F WS GLISD TYKQL LLC  +SF+H S +            
Sbjct: 218 VGNALFDDHHDHVGVFEFLWSTGLISDQTYKQLNLLCANQSFVHSSASCDEILEVADKEI 277

Query: 52  -------------SVSQSNRLLKRMHVVGHASEKYDPCTEKHSVVYFNQPEVQKALHVIP 98
                        S + SNRL KRMH++G   E+YDPCTEKHSV YFN PEVQ+ALHV P
Sbjct: 278 GNIDHYSIFTPPCSEASSNRLRKRMHMIGRVGERYDPCTEKHSVAYFNLPEVQQALHVDP 337

Query: 99  AVALAKWETCRWHQQHALMIFFIFTALQWGVVNNNWLDSPRIVLDIYHELIHSGLRIWMF 158
             A +KWETC +                  ++N NW DS   VLDIY ELI +GLRIW+F
Sbjct: 338 KFAPSKWETCSY------------------LINGNWKDSAGSVLDIYRELIQAGLRIWVF 379

Query: 159 SGDTDAVIPVTSARYSIDALNLPTVKPWRAWYDEGQVG 196
           SGDTDAV+P+TS RYS+DAL LP +  WR WYD GQVG
Sbjct: 380 SGDTDAVLPITSTRYSVDALKLPVIGSWRPWYDGGQVG 417

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356508384|ref|XP_003522937.1| PREDICTED: serine carboxypeptidase II-2-like [Glycine max]

 Score =  230 bits (587), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 120/221 (54%), Positives = 143/221 (64%), Gaps = 45/221 (20%)

Query: 3   VGNALTDDYHDYLGLFQFWWSAGLISDDTYKQLKLLCDYESFIHPSCT------------ 50
           VGNALTDD+HD LG+F+F WS+GLISD TYK L LLCD++S  HPS +            
Sbjct: 216 VGNALTDDFHDQLGMFEFMWSSGLISDQTYKLLNLLCDFQSVEHPSHSCEKIWEIANEEL 275

Query: 51  ---------------ASVSQSNRLLKRMHVVGHASEKYDPCTEKHSVVYFNQPEVQKALH 95
                          A+VSQ +RL++R H +G  S +YDPCTEKHS+VYFN+P+VQ  LH
Sbjct: 276 GNIDPYSLFTPPCQHANVSQLSRLVRRKHRIGRLSAEYDPCTEKHSIVYFNRPDVQTVLH 335

Query: 96  VIPAVALAKWETCRWHQQHALMIFFIFTALQWGVVNNNWLDSPRIVLDIYHELIHSGLRI 155
           V P    A WETC            +FT         NW DSPR VL+IYHELI  GLRI
Sbjct: 336 VDPDHKPATWETCSDE---------VFT---------NWKDSPRTVLNIYHELIQMGLRI 377

Query: 156 WMFSGDTDAVIPVTSARYSIDALNLPTVKPWRAWYDEGQVG 196
           W+FSG+TD VIPVTS RYSI AL+LPTV PWRAWYD+G+VG
Sbjct: 378 WVFSGNTDVVIPVTSTRYSIKALDLPTVSPWRAWYDDGEVG 418

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|2493494|sp|P55748.1|CBP22_HORVU RecName: Full=Serine carboxypeptidase II-2; AltName: Full=CP-MII.2; Contains: RecName: Full=Serine carboxypeptidase II-2 chain A; Contains: RecName: Full=Serine carboxypeptidase II-2 chain B; Flags: Precursor gi|619351|gb|AAB31590.1| CP-MII.2=serine carboxypeptidase [Hordeum vulgare=barley, cv. Alexis, aleurone, Peptide, 436 aa] gi|6102957|emb|CAB59202.1| serine carboxylase II-2 [Hordeum vulgare subsp. vulgare]

 Score =  230 bits (587), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 119/222 (53%), Positives = 141/222 (63%), Gaps = 46/222 (20%)

Query: 3   VGNALTDDYHDYLGLFQFWWSAGLISDDTYKQLKLLCDYESFIH---------------- 46
           VGNALTDD+HD+ G+FQ+ W+ GLISD TYK L + CD+ESF+H                
Sbjct: 181 VGNALTDDFHDHYGIFQYMWTTGLISDQTYKLLNIFCDFESFVHTSPQCDKILDIASTEA 240

Query: 47  ----------PSCTASVSQS-NRLLKRMHVVGHASEKYDPCTEKHSVVYFNQPEVQKALH 95
                     P+C +S + S N+++KR+  VG   E+YDPCTEKHS+VYFN  EVQKALH
Sbjct: 241 GNIDSYSIFTPTCHSSFASSRNKVVKRLRSVGKMGEQYDPCTEKHSIVYFNLHEVQKALH 300

Query: 96  VIPAVALAKWETCRWHQQHALMIFFIFTALQWGVVNNNWLDSPRIVLDIYHELIHSGLRI 155
           V P +  +KWETC                    V+N NW D  R VL IYHELI  GLRI
Sbjct: 301 VNPVIGKSKWETCS------------------EVINTNWKDCERSVLHIYHELIQYGLRI 342

Query: 156 WMFSGDTDAVIPVTSARYSIDALNLPTVKPWRAWY-DEGQVG 196
           WMFSGDTDAVIPVTS RYSIDAL LPTV PW AWY D+G+VG
Sbjct: 343 WMFSGDTDAVIPVTSTRYSIDALKLPTVTPWHAWYDDDGEVG 384

Source: Hordeum vulgare

Species: Hordeum vulgare

Genus: Hordeum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

>gi|115466820|ref|NP_001057009.1| Os06g0186400 [Oryza sativa Japonica Group] gi|55773762|dbj|BAD72445.1| putative serine carboxylase II-2 [Oryza sativa Japonica Group] gi|55773861|dbj|BAD72446.1| putative serine carboxylase II-2 [Oryza sativa Japonica Group] gi|113595049|dbj|BAF18923.1| Os06g0186400 [Oryza sativa Japonica Group] gi|125596293|gb|EAZ36073.1| hypothetical protein OsJ_20382 [Oryza sativa Japonica Group] gi|215695139|dbj|BAG90330.1| unnamed protein product [Oryza sativa Japonica Group]

 Score =  229 bits (584), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 119/222 (53%), Positives = 140/222 (63%), Gaps = 46/222 (20%)

Query: 3   VGNALTDDYHDYLGLFQFWWSAGLISDDTYKQLKLLCDYESFIH---------------- 46
            GNAL DD+HD+LG+FQF W+ GLISD TY+ L + CDYESF+H                
Sbjct: 229 AGNALFDDFHDHLGIFQFMWTNGLISDQTYRLLNVFCDYESFVHTSSQCNKILDIASDEA 288

Query: 47  ----------PSCTASVSQS-NRLLKRMHVVGHASEKYDPCTEKHSVVYFNQPEVQKALH 95
                     P+C AS + S N+++KR+H VG   E+YDPCTEKHS VYFN  EVQKALH
Sbjct: 289 GNIDSYSIFTPTCHASFASSRNKVMKRLHSVGKMGERYDPCTEKHSTVYFNLAEVQKALH 348

Query: 96  VIPAVALAKWETCRWHQQHALMIFFIFTALQWGVVNNNWLDSPRIVLDIYHELIHSGLRI 155
           V P +  +KWETC                    VVN NW D  R VL IYHELI  GLRI
Sbjct: 349 VSPIINKSKWETCS------------------DVVNTNWKDCERSVLHIYHELIQYGLRI 390

Query: 156 WMFSGDTDAVIPVTSARYSIDALNLPTVKPWRAWY-DEGQVG 196
           W+FSGDTDAV+PVTS RYSI+AL LPTV PW AWY D+G+VG
Sbjct: 391 WVFSGDTDAVLPVTSTRYSINALKLPTVTPWNAWYDDDGEVG 432

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449506219|ref|XP_004162685.1| PREDICTED: serine carboxypeptidase-like 29-like [Cucumis sativus]

 Score =  229 bits (584), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 115/218 (52%), Positives = 138/218 (63%), Gaps = 42/218 (19%)

Query: 3   VGNALTDDYHDYLGLFQFWWSAGLISDDTYKQLKLLCDYESFIHPSCTA----------- 51
           VGNAL DD+HD++G+F+F WS GLISD TYKQL LLC  +SF+H S +            
Sbjct: 218 VGNALFDDHHDHVGVFEFLWSTGLISDQTYKQLNLLCANQSFVHSSASCDEILEVADKEI 277

Query: 52  -------------SVSQSNRLLKRMHVVGHASEKYDPCTEKHSVVYFNQPEVQKALHVIP 98
                        S + SNRL KRMH++G   E+YD CTEKHSV YFN PEVQ+ALHV P
Sbjct: 278 GNIDHYSIFTPPCSEASSNRLRKRMHMIGRVGERYDLCTEKHSVAYFNLPEVQQALHVDP 337

Query: 99  AVALAKWETCRWHQQHALMIFFIFTALQWGVVNNNWLDSPRIVLDIYHELIHSGLRIWMF 158
             A +KWETC +                  ++N NW DS   VLDIY ELI +GLRIW+F
Sbjct: 338 KFAPSKWETCSY------------------LINGNWKDSAGSVLDIYRELIQAGLRIWVF 379

Query: 159 SGDTDAVIPVTSARYSIDALNLPTVKPWRAWYDEGQVG 196
           SGDTDAV+P+TS RYS+DAL LP +  WR WYD GQVG
Sbjct: 380 SGDTDAVLPITSTRYSVDALKLPVIGSWRPWYDGGQVG 417

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	196
TAIR|locus:2039275	452	scpl26 "serine carboxypeptidas	0.346	0.150	0.573	1.2e-43
TAIR|locus:2078598	473	scpl25 "serine carboxypeptidas	0.346	0.143	0.529	3.9e-37
TAIR|locus:2118706	465	BRS1 "BRI1 SUPPRESSOR 1" [Arab	0.346	0.146	0.544	1.4e-34
TAIR|locus:2077422	459	SCPL27 "serine carboxypeptidas	0.974	0.416	0.420	1.7e-34
TAIR|locus:2126644	479	scpl29 "serine carboxypeptidas	0.943	0.386	0.421	8.5e-33
TAIR|locus:2061436	464	scpl22 "serine carboxypeptidas	0.908	0.383	0.361	1.2e-28
TAIR|locus:2166870	499	SCPL34 "serine carboxypeptidas	0.321	0.126	0.492	1.5e-25
TAIR|locus:2086137	478	scpl33 "serine carboxypeptidas	0.362	0.148	0.373	8.5e-25
TAIR|locus:2058734	462	scpl28 "serine carboxypeptidas	0.346	0.147	0.478	1.6e-24
TAIR|locus:2008480	463	SCPL32 "serine carboxypeptidas	0.903	0.382	0.336	1.1e-23

TAIR|locus:2039275 scpl26 "serine carboxypeptidase-like 26" [Arabidopsis thaliana (taxid:3702)]

 Score = 217 (81.4 bits), Expect = 1.2e-43, Sum P(3) = 1.2e-43
 Identities = 39/68 (57%), Positives = 48/68 (70%)

Query:   129 VVNNNWLDSPRIVLDIYHELIHSGLRIWMFSGDTDAVIPVTSARYSIDALNLPTVKPWRA 188
             +V   W DSP  +L IY ELI +GLRIW+FSGDTD+V+P+T  RYSI AL L  +  W  
Sbjct:   341 IVGEKWADSPLSMLPIYKELIAAGLRIWVFSGDTDSVVPITGTRYSIRALKLQPLSKWYP 400

Query:   189 WYDEGQVG 196
             W D+GQVG
Sbjct:   401 WNDDGQVG 408

GO:0004185 "serine-type carboxypeptidase activity" evidence=IEA;ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0006508 "proteolysis" evidence=IEA;ISS

GO:0005773 "vacuole" evidence=IDA

TAIR|locus:2078598 scpl25 "serine carboxypeptidase-like 25" [Arabidopsis thaliana (taxid:3702)]

 Score = 205 (77.2 bits), Expect = 3.9e-37, Sum P(3) = 3.9e-37
 Identities = 36/68 (52%), Positives = 48/68 (70%)

Query:   129 VVNNNWLDSPRIVLDIYHELIHSGLRIWMFSGDTDAVIPVTSARYSIDALNLPTVKPWRA 188
             V+N NW D+   VL IY E+I  G+R+W+FSGD D+V+PVT+ RYS+  L+L T  PW  
Sbjct:   361 VLNRNWNDTDSTVLPIYREMIAGGIRVWVFSGDVDSVVPVTATRYSLARLSLSTKLPWYP 420

Query:   189 WYDEGQVG 196
             WY + QVG
Sbjct:   421 WYVKKQVG 428

GO:0004185 "serine-type carboxypeptidase activity" evidence=IEA;ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0006508 "proteolysis" evidence=IEA;ISS

TAIR|locus:2118706 BRS1 "BRI1 SUPPRESSOR 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 204 (76.9 bits), Expect = 1.4e-34, Sum P(3) = 1.4e-34
 Identities = 37/68 (54%), Positives = 47/68 (69%)

Query:   129 VVNNNWLDSPRIVLDIYHELIHSGLRIWMFSGDTDAVIPVTSARYSIDALNLPTVKPWRA 188
             V+   W DS + +L IY EL  SGLRIW+FSGDTD+V+PVT+ R+S+  LNLP    W  
Sbjct:   352 VLIKTWKDSDKTMLPIYKELAASGLRIWIFSGDTDSVVPVTATRFSLSHLNLPVKTRWYP 411

Query:   189 WYDEGQVG 196
             WY + QVG
Sbjct:   412 WYTDNQVG 419

GO:0004185 "serine-type carboxypeptidase activity" evidence=IEA;IDA

GO:0005576 "extracellular region" evidence=ISM

GO:0006508 "proteolysis" evidence=IEA;ISS;IDA

GO:0009742 "brassinosteroid mediated signaling pathway" evidence=IGI

GO:0005615 "extracellular space" evidence=IDA

TAIR|locus:2077422 SCPL27 "serine carboxypeptidase-like 27" [Arabidopsis thaliana (taxid:3702)]

 Score = 374 (136.7 bits), Expect = 1.7e-34, P = 1.7e-34
 Identities = 85/202 (42%), Positives = 114/202 (56%)

Query:     3 VGNALTDDYHDYLGLFQFWWSAGLISDDTYKQLKLLCDYESFIHPSCTASVSQSNRLLKR 62
             VGNA+TDDYHDY+G F++WW+ GLISD TY QLK  C   S  HPS    V+  N  L++
Sbjct:   216 VGNAVTDDYHDYIGTFEYWWNHGLISDSTYHQLKTACYSVSSQHPSMQCMVALRNAELEQ 275

Query:    63 MHVVGHASEKYDPCTEKHSVVYF---NQPEVQKALHVIPAVA-LAKWETCRWHQQHALMI 118
              ++  + S    PC    ++  F     P + +A    P     +     R   Q AL  
Sbjct:   276 GNIDPY-SIFTKPCNSTVALKRFLKGRYPWMSRAYD--PCTERYSNVYFNRLDVQKALHA 332

Query:   119 FFIFTALQW----GVVNNNWLDSPRIVLDIYHELIHSGLRIWMFSGDTDAVIPVTSARYS 174
                  +  W     +V + W DSP  +L IY ELI +GL+IW+FSGDTDAV+P+T+ RYS
Sbjct:   333 NVTRLSYPWKACSDIVGSYWDDSPLSMLPIYKELITAGLKIWVFSGDTDAVVPITATRYS 392

Query:   175 IDALNLPTVKPWRAWYDEGQVG 196
             +DAL L T+  W  WYD G+VG
Sbjct:   393 VDALKLATITNWYPWYDHGKVG 414

GO:0004185 "serine-type carboxypeptidase activity" evidence=IEA;ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0006508 "proteolysis" evidence=IEA;ISS

GO:0007020 "microtubule nucleation" evidence=RCA

TAIR|locus:2126644 scpl29 "serine carboxypeptidase-like 29" [Arabidopsis thaliana (taxid:3702)]

 Score = 358 (131.1 bits), Expect = 8.5e-33, P = 8.5e-33
 Identities = 89/211 (42%), Positives = 121/211 (57%)

Query:     3 VGNALTDDYHDYLGLFQFWWSAGLISDDTYKQLKLLCDYESFIHPSCTASVSQSNRLLKR 62
             VGN L DD+HD LGLFQ+ WS G ISD TY  L+L C +ESFIH S      Q N++L+ 
Sbjct:   218 VGNGLMDDFHDRLGLFQYIWSLGFISDQTYSLLQLQCGFESFIHSS-----KQCNKILEI 272

Query:    63 MHV-VGHASEKYDPCTEKHSVVYFNQPEVQKALHVIPAVALAKWETCRWHQQHALMIFF- 120
                 +G+  ++Y   T    V   +Q  +      + +    +++ C   ++H  + F  
Sbjct:   273 ADKEIGNI-DQYSVFTPA-CVANASQSNMLLKKRPMTSRVSEQYDPCT--EKHTTVYFNL 328

Query:   121 --IFTAL---------QWG----VVNNNWLDSPRIVLDIYHELIHSGLRIWMFSGDTDAV 165
               +  AL         +W     VV+ +W DSP  VL+IYHELI +GLRIW+FSGD DAV
Sbjct:   329 PEVQKALHVPPGLAPSKWDTCSDVVSEHWNDSPSSVLNIYHELIAAGLRIWVFSGDADAV 388

Query:   166 IPVTSARYSIDALNLPTVKPWRAWYDEGQVG 196
             +PVTS RYSIDALNL  +  +  WY +GQVG
Sbjct:   389 VPVTSTRYSIDALNLRPLSAYGPWYLDGQVG 419

GO:0004185 "serine-type carboxypeptidase activity" evidence=IEA;ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0006508 "proteolysis" evidence=IEA;ISS

GO:0005773 "vacuole" evidence=IDA

GO:0019932 "second-messenger-mediated signaling" evidence=RCA

TAIR|locus:2061436 scpl22 "serine carboxypeptidase-like 22" [Arabidopsis thaliana (taxid:3702)]

 Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
 Identities = 81/224 (36%), Positives = 110/224 (49%)

Query:     3 VGNALTDDYHDYLGLFQFWWSAGLISDDTYKQLKLLCDY---------ESFIH------- 46
             VGN   D  +D LG   +WWS  +ISD +Y ++   CD+         +S I+       
Sbjct:   211 VGNPEMDKNNDRLGTITYWWSHAMISDASYNRILKNCDFTADRFSKECDSAIYVAAADFG 270

Query:    47 ---------PSCTASVSQSNRL----LKRMHVVGHASE-KYDPCTEKHSVVYFNQPEVQK 92
                      P C     Q+N+     + +MH      E +YDPCTE ++ +Y+N+PEVQ+
Sbjct:   271 DIDQYSIYTPKCVPPQDQTNQTKFEQMMQMHTTKRFLEDQYDPCTENYAEIYYNRPEVQR 330

Query:    93 ALHVIPAVALAKWETCRWHQQHALMIFFIFTALQWGVVNNNWLDSPRIVLDIYHELIHSG 152
             A+H        KW  C            +F    W     NW DS   +L IY ELI +G
Sbjct:   331 AMHANHTAIPYKWTACSDS---------VFN--NW-----NWRDSDNSMLPIYKELIAAG 374

Query:   153 LRIWMFSGDTDAVIPVTSARYSIDALNLPTVKPWRAWYDEGQVG 196
             LRIW++SGDTD+VIPVT+ RYS+  LNL     W  WY   QVG
Sbjct:   375 LRIWVYSGDTDSVIPVTATRYSLGKLNLRVKTRWYPWYSGNQVG 418

GO:0004185 "serine-type carboxypeptidase activity" evidence=IEA;ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0006508 "proteolysis" evidence=IEA;ISS

TAIR|locus:2166870 SCPL34 "serine carboxypeptidase-like 34" [Arabidopsis thaliana (taxid:3702)]

 Score = 173 (66.0 bits), Expect = 1.5e-25, Sum P(3) = 1.5e-25
 Identities = 31/63 (49%), Positives = 41/63 (65%)

Query:   134 WLDSPRIVLDIYHELIHSGLRIWMFSGDTDAVIPVTSARYSIDALNLPTVKPWRAWYDEG 193
             W D+P  +L     L+ +GLR+W+FSGDTD  IPVT+ RYS+  L L  V+ W  WY + 
Sbjct:   390 WSDAPASMLPTLRTLVSAGLRVWVFSGDTDGRIPVTATRYSLKKLGLKIVQDWTPWYTKL 449

Query:   194 QVG 196
             QVG
Sbjct:   450 QVG 452

GO:0004185 "serine-type carboxypeptidase activity" evidence=IEA;ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0006508 "proteolysis" evidence=IEA;ISS

GO:0005773 "vacuole" evidence=IDA

GO:0009505 "plant-type cell wall" evidence=IDA

TAIR|locus:2086137 scpl33 "serine carboxypeptidase-like 33" [Arabidopsis thaliana (taxid:3702)]

 Score = 152 (58.6 bits), Expect = 8.5e-25, Sum P(3) = 8.5e-25
 Identities = 28/75 (37%), Positives = 45/75 (60%)

Query:   126 QWGVVNNNWLDSPRI----VLDIYHELIHSGLRIWMFSGDTDAVIPVTSARYSIDALNLP 181
             +W V N++ L +       +L  Y +LI +GL+IW++SGD D  +PV  +RY ++AL + 
Sbjct:   357 RWKVCNDSILQTYHFTVSSMLPTYSKLIKAGLKIWVYSGDADGRVPVIGSRYCVEALGIS 416

Query:   182 TVKPWRAWYDEGQVG 196
                 WR+W+   QVG
Sbjct:   417 VKSEWRSWFHNHQVG 431

GO:0004185 "serine-type carboxypeptidase activity" evidence=IEA;ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0006508 "proteolysis" evidence=IEA;ISS

TAIR|locus:2058734 scpl28 "serine carboxypeptidase-like 28" [Arabidopsis thaliana (taxid:3702)]

 Score = 181 (68.8 bits), Expect = 1.6e-24, Sum P(2) = 1.6e-24
 Identities = 33/69 (47%), Positives = 47/69 (68%)

Query:   129 VVNNNWLDSPRIVLDIYHELIHSGLRIWMFSGDTDAVIPVTSARYSIDALNLPTVKPWRA 188
             V+  NW DSP+ +L I   L+ + LRIW+FSGD+DAV+P++  R+SI+A+ L + K W  
Sbjct:   345 VIRKNWKDSPKSMLPIIKNLLQAHLRIWIFSGDSDAVLPLSGTRHSINAMKLKSSKRWYP 404

Query:   189 WY-DEGQVG 196
             WY   G VG
Sbjct:   405 WYHSHGLVG 413

GO:0004185 "serine-type carboxypeptidase activity" evidence=IEA;ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0006508 "proteolysis" evidence=IEA;ISS

TAIR|locus:2008480 SCPL32 "serine carboxypeptidase-like 32" [Arabidopsis thaliana (taxid:3702)]

 Score = 276 (102.2 bits), Expect = 1.1e-23, P = 1.1e-23
 Identities = 74/220 (33%), Positives = 104/220 (47%)

Query:     3 VGNALTDDYHDYLGLFQFWWSAGLISDDTYKQLKLLCDYES---FIHPSCTASVSQSNRL 59
             +GN LT    D+ G   + W+  ++SD+TY+ +K  C++ S   +    C   V +  + 
Sbjct:   213 LGNPLTSYAEDWTGWVDYAWNHAVVSDETYRVIKQSCNFSSDTTWDVKDCKEGVDEILKQ 272

Query:    60 LKR-----------MH----VVGHASEK---------YDPCTEKHSVVYFNQPEVQKALH 95
              K            MH    V  +A+ K         +DPC + ++ V++N+ +VQKALH
Sbjct:   273 YKEIDQFSLYTPICMHHSSKVDSYANYKTTIPRLFDGFDPCLDDYAKVFYNRADVQKALH 332

Query:    96 VIPAVALAKWETCRWHQQHALMIFFIFTALQWGVVNNNWLDSPRIVLDIYHELIHSGLRI 155
                 V L  W  C       L          W     NW DS R VL IY +LI  G R+
Sbjct:   333 ATDGVHLKNWTICN---DDILN--------HW-----NWTDSKRSVLPIYKKLIAGGFRV 376

Query:   156 WMFSGDTDAVIPVTSARYSIDALNLPTVKPWRAWYDEGQV 195
             W++SGDTD  +PV S RY I+ L LP    WR WY E QV
Sbjct:   377 WVYSGDTDGRVPVLSTRYCINKLELPIKTAWRPWYHETQV 416

GO:0004185 "serine-type carboxypeptidase activity" evidence=IEA;ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0006508 "proteolysis" evidence=IEA;ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.4.16	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: fgenesh4_pg.C_LG_XVIII000903 hypothetical protein (470 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	196
pfam00450	415	pfam00450, Peptidase_S10, Serine carboxypeptidase	1e-43
PLN03016	433	PLN03016, PLN03016, sinapoylglucose-malate O-sinap	2e-04
PLN02213	319	PLN02213, PLN02213, sinapoylglucose-malate O-sinap	3e-04
PLN02209	437	PLN02209, PLN02209, serine carboxypeptidase	0.002

>gnl|CDD|215926 pfam00450, Peptidase_S10, Serine carboxypeptidase

 Score =  149 bits (379), Expect = 1e-43
 Identities = 57/231 (24%), Positives = 81/231 (35%), Gaps = 61/231 (26%)

Query: 1   MQVGNALTDDYHDYLGLFQFWWSAGLISDDTYKQLKLLC--------------------- 39
           + +GN LTD    Y     F +  GLISD+ Y+ LK  C                     
Sbjct: 172 VLIGNGLTDPAIQYNSYIPFAYYHGLISDELYESLKKACCGKYPDCDPANTKCLNLVEEA 231

Query: 40  ----------DYESFIHPSCTASVSQSNRLLKRMHVVGHASEKYDPCTEKHSVVYFNQPE 89
                     +  +   P C  S    N               YD   E +   Y N+P+
Sbjct: 232 SGCNAYNGGINPYNIYTPCCYNSSLSLNPSSTDS------CGGYDCYDESYVEKYLNRPD 285

Query: 90  VQKALHVIPAVALAKWETCRWHQQHALMIFFIFTALQWGVVNNNWL--DSPRIVLDIYHE 147
           V+KALH     ++ +W  C                        NW   D  + +L I  +
Sbjct: 286 VRKALHANKG-SVGEWSRCND-------------------EVFNWYGDDISKSMLPILPK 325

Query: 148 LIHSGLRIWMFSGDTDAVIPVTSARYSIDALNLPTVKPWRAWYDE--GQVG 196
           L+  GLR+ ++SGD D +      +  IDALN      +R WY    GQV 
Sbjct: 326 LLEGGLRVLIYSGDHDLICNFLGTQAWIDALNWSGKDGFRPWYVSVDGQVA 376

Length = 415

>gnl|CDD|178590 PLN03016, PLN03016, sinapoylglucose-malate O-sinapoyltransferase

 Score = 41.2 bits (96), Expect = 2e-04
 Identities = 48/211 (22%), Positives = 85/211 (40%), Gaps = 41/211 (19%)

Query: 3   VGNALTDDYHDYLGLFQ--FWWSAGLISDDTYKQLKLLCDYESF-IHPSCTASVSQSNRL 59
           +GN +T  Y D+   F+  + +  GLISD+ Y+ +K +C+   + + PS T  +      
Sbjct: 205 LGNPVT--YMDFEQNFRIPYAYGMGLISDEIYEPMKRICNGNYYNVDPSNTQCLK----- 257

Query: 60  LKRMHVVGHASEKYDPCTEKHSVVYFNQPEVQKALHVIPAVALAKWETCRWHQQHALMIF 119
                     +E+Y  CT K ++ +   P+        P         C ++  H +  +
Sbjct: 258 ---------LTEEYHKCTAKINIHHILTPDCDVTNVTSP--------DCYYYPYHLIECW 300

Query: 120 F----IFTALQ--------WGVVNNNWLDSPRIVLDIYHELIHS--GLRIWMFSGDTDAV 165
                +  AL         W   N     +  IV  I + + +S  G R  ++SGD D  
Sbjct: 301 ANDESVREALHIEKGSKGKWARCNRTIPYNHDIVSSIPYHMNNSISGYRSLIYSGDHDIA 360

Query: 166 IPVTSARYSIDALNLPTVKPWRAWYDEGQVG 196
           +P  + +  I +LN   +  WR W    Q+ 
Sbjct: 361 VPFLATQAWIRSLNYSPIHNWRPWMINNQIA 391

Length = 433

>gnl|CDD|165857 PLN02213, PLN02213, sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase

 Score = 40.1 bits (93), Expect = 3e-04
 Identities = 48/211 (22%), Positives = 86/211 (40%), Gaps = 41/211 (19%)

Query: 3   VGNALTDDYHDYLGLFQ--FWWSAGLISDDTYKQLKLLCDYESF-IHPSCTASVSQSNRL 59
           +GN +T  Y D+   F+  + +  GLISD+ Y+ +K +C+   + + PS T  +      
Sbjct: 91  LGNPVT--YMDFEQNFRIPYAYGMGLISDEIYEPMKRICNGNYYNVDPSNTQCLK----- 143

Query: 60  LKRMHVVGHASEKYDPCTEKHSVVYFNQPEVQKALHVIPAVALAKWETCRWHQQHALMIF 119
                     +E+Y  CT K ++ +   P+        P         C ++  H +  +
Sbjct: 144 ---------LTEEYHKCTAKINIHHILTPDCDVTNVTSP--------DCYYYPYHLIECW 186

Query: 120 F----IFTAL--------QWGVVNNNWLDSPRIVLDIYHELIHS--GLRIWMFSGDTDAV 165
                +  AL        +W   N     +  IV  I + + +S  G R  ++SGD D  
Sbjct: 187 ANDESVREALHIEKGSKGKWARCNRTIPYNHDIVSSIPYHMNNSISGYRSLIYSGDHDIA 246

Query: 166 IPVTSARYSIDALNLPTVKPWRAWYDEGQVG 196
           +P  + +  I +LN   +  WR W    Q+ 
Sbjct: 247 VPFLATQAWIRSLNYSPIHNWRPWMINNQIA 277

Length = 319

>gnl|CDD|177859 PLN02209, PLN02209, serine carboxypeptidase

 Score = 38.1 bits (88), Expect = 0.002
 Identities = 47/202 (23%), Positives = 78/202 (38%), Gaps = 67/202 (33%)

Query: 26  LISDDTYKQLKLLCDYESFIHPSCTASVSQSNRLLKRMHVVGHASEKYDPCTEK----HS 81
           LISD+ Y+ LK +C    F       SV  SN+   ++       E+Y  CT+     H+
Sbjct: 230 LISDELYESLKRICKGNYF-------SVDPSNKKCLKL------VEEYHKCTDNINSHHT 276

Query: 82  VV-------------------------YFNQPEVQKALHVIPAVALAKWETCRWHQQHAL 116
           ++                         + N   V++ALHV    ++ +W   R H+    
Sbjct: 277 LIANCDDSNTQHISPDCYYYPYHLVECWANNESVREALHVDKG-SIGEW--IRDHR---- 329

Query: 117 MIFFIFTALQWGVVNNNWLDSPRIVLDIYHELIHS--GLRIWMFSGDTDAVIPVTSARYS 174
                      G+   +      I   I + + +S  G R  +FSGD D  +P  + +  
Sbjct: 330 -----------GIPYKS-----DIRSSIPYHMNNSINGYRSLIFSGDHDITMPFQATQAW 373

Query: 175 IDALNLPTVKPWRAWYDEGQVG 196
           I +LN   +  WR W  +GQ+ 
Sbjct: 374 IKSLNYSIIDDWRPWMIKGQIA 395

Length = 437

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	196
KOG1282	454	consensus Serine carboxypeptidases (lysosomal cath	100.0
PLN02213	319	sinapoylglucose-malate O-sinapoyltransferase/ carb	100.0
PLN03016	433	sinapoylglucose-malate O-sinapoyltransferase	100.0
PLN02209	437	serine carboxypeptidase	100.0
PTZ00472	462	serine carboxypeptidase (CBP1); Provisional	99.98
PF00450	415	Peptidase_S10: Serine carboxypeptidase; InterPro:	99.97
KOG1283	414	consensus Serine carboxypeptidases [Posttranslatio	99.56
COG2939	498	Carboxypeptidase C (cathepsin A) [Amino acid trans	99.18

>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]

Probab=100.00  E-value=5.3e-40  Score=286.52  Aligned_cols=177  Identities=38%  Similarity=0.673  Sum_probs=150.4

Q ss_pred             CeeecCcCCccccchhHHHHHHHhcCCCHHHHHHHhccCCccc-------cccccchhhhHHhH-HHhhhhhcccC----
Q 029289            1 MQVGNALTDDYHDYLGLFQFWWSAGLISDDTYKQLKLLCDYES-------FIHPSCTASVSQSN-RLLKRMHVVGH----   68 (196)
Q Consensus         1 i~IGNg~~dp~~q~~~~~~~a~~~glI~~~~~~~~~~~C~~~~-------~~~~~C~~~~~~~~-~~~~~~~~~~~----   68 (196)
                      ++||||++|+..|.+++++|+|+|||||+++|+.+++.|.+..       ..+..|..+..... .+.+.++.+..    
T Consensus       206 ~~IGNg~td~~~~~~~~~~~a~~h~liSde~~~~l~~~C~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~i~~y~i~~~~  285 (454)
T KOG1282|consen  206 YAIGNGLTDPEIDYNGRIPFAWGHGLISDELYESLKRACDFSSDNYANVDPSNTKCNKAVEEFDSKTTGDIDNYYILTPD  285 (454)
T ss_pred             EEecCcccCccccccchhhhhhhcccCCHHHHHHHHHHhccCcccccccCCchhHHHHHHHHHHHHHhccCchhhhcchh
Confidence            5899999999999999999999999999999999999998632       23568988876655 44343333321    


Q ss_pred             ------------CCCCCCCCccchhhhccCcHHHHHhcCCCCCccccccccccchhhhhHHHHHHHhhhhcccccccccc
Q 029289           69 ------------ASEKYDPCTEKHSVVYFNQPEVQKALHVIPAVALAKWETCRWHQQHALMIFFIFTALQWGVVNNNWLD  136 (196)
Q Consensus        69 ------------~~~~~~~c~~~~~~~ylN~~~Vr~aLhv~~~~~~~~w~~c~~~~~~~~~~~~~~~~~~~~~v~~~~~d  136 (196)
                                  ....|++|.+.+.++|||+|+||+||||+...++ +|+.||+.                  |...|.+
T Consensus       286 C~~~~~~~~~~~~~~~~~~c~~~~~~~ylN~~~VrkALh~~~~~~~-~W~~Cn~~------------------v~~~~~~  346 (454)
T KOG1282|consen  286 CYPTSYELKKPTDCYGYDPCLSDYAEKYLNRPEVRKALHANKTSIG-KWERCNDE------------------VNYNYND  346 (454)
T ss_pred             hccccccccccccccccCCchhhhHHHhcCCHHHHHHhCCCCCCCC-cccccChh------------------hhccccc
Confidence                        1345688988777999999999999999886422 79999998                  7767899


Q ss_pred             CCcchHHHHHHHHHcC-CeEEEeecCcccccchhhHHHHHHHcCCCCcccccccccC-CcCC
Q 029289          137 SPRIVLDIYHELIHSG-LRIWMFSGDTDAVIPVTSARYSIDALNLPTVKPWRAWYDE-GQVG  196 (196)
Q Consensus       137 ~~~s~~~~~~~LL~~g-irvLiYsGd~D~icn~~Gt~~~i~~L~w~~~~~~~~W~~~-gqva  196 (196)
                      ...+++|++.+++.++ +||||||||+|++||++||++||++|+++.+++||||+++ +|||
T Consensus       347 ~~~sm~p~~~~~~~~~~~rvliysGD~D~~~p~~gt~~~i~~L~~~~~~~~~pW~~~~~qva  408 (454)
T KOG1282|consen  347 DIKSMLPIHKKLIASGGYRVLIYSGDHDLVVPFLGTQAWIKSLNLSITDEWRPWYHKGGQVA  408 (454)
T ss_pred             CccchHHHHHHHhhcCceEEEEEeCCcceeCcchhhHHHHHhccCccccCccCCccCCCcee
Confidence            9999999999999865 9999999999999999999999999999999999999995 7986

>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase

Probab=100.00  E-value=1.8e-35  Score=250.57  Aligned_cols=175  Identities=21%  Similarity=0.364  Sum_probs=134.9

Q ss_pred             CeeecCcCCccccchhHHHHHHHhcCCCHHHHHHHhccCCccc----cccccchhhhHHhHHHhhhhhcccCCCC---CC
Q 029289            1 MQVGNALTDDYHDYLGLFQFWWSAGLISDDTYKQLKLLCDYES----FIHPSCTASVSQSNRLLKRMHVVGHASE---KY   73 (196)
Q Consensus         1 i~IGNg~~dp~~q~~~~~~~a~~~glI~~~~~~~~~~~C~~~~----~~~~~C~~~~~~~~~~~~~~~~~~~~~~---~~   73 (196)
                      |+||||||||..|..++.+|+|.||||++++++.+++.|....    +....|..+......+.+.++.++....   .+
T Consensus        89 i~IGNg~t~~~~~~~~~~~~~~~~gli~~~~~~~~~~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (319)
T PLN02213         89 YMLGNPVTYMDFEQNFRIPYAYGMGLISDEIYEPMKRICNGNYYNVDPSNTQCLKLTEEYHKCTAKINIHHILTPDCDVT  168 (319)
T ss_pred             EEeCCCCCCccccchhHhhHHHhcCCCCHHHHHHHHHhcCCCccCCCCCcHHHHHHHHHHHHHHhcCCHhhcccCcccCc
Confidence            6899999999999999999999999999999999999996321    2345687766544444444444332211   11


Q ss_pred             ----CCCcc---chhhhccCcHHHHHhcCCCCCccccccccccchhhhhHHHHHHHhhhhccccccccccCCcchHHHHH
Q 029289           74 ----DPCTE---KHSVVYFNQPEVQKALHVIPAVALAKWETCRWHQQHALMIFFIFTALQWGVVNNNWLDSPRIVLDIYH  146 (196)
Q Consensus        74 ----~~c~~---~~~~~ylN~~~Vr~aLhv~~~~~~~~w~~c~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~s~~~~~~  146 (196)
                          ..|..   ..+..|||+++||+||||++.. ..+|+.|+..                  |.  +.....++++.+.
T Consensus       169 ~~~~~~c~~~~~~~~~~ylN~~~V~~aL~v~~~~-~~~w~~c~~~------------------v~--~~~d~~~~~~~~~  227 (319)
T PLN02213        169 NVTSPDCYYYPYHLIECWANDESVREALHIEKGS-KGKWARCNRT------------------IP--YNHDIVSSIPYHM  227 (319)
T ss_pred             cCCCCCcccchhHHHHHHhCCHHHHHHhCcCCCC-CCCCccCCcc------------------cc--cccccccchHHHH
Confidence                24653   3578999999999999997531 1379999988                  54  4333345666666


Q ss_pred             HHHHcCCeEEEeecCcccccchhhHHHHHHHcCCCCcccccccccCCcCC
Q 029289          147 ELIHSGLRIWMFSGDTDAVIPVTSARYSIDALNLPTVKPWRAWYDEGQVG  196 (196)
Q Consensus       147 ~LL~~girvLiYsGd~D~icn~~Gt~~~i~~L~w~~~~~~~~W~~~gqva  196 (196)
                      ++|.+|+||||||||+|++||++|+++|+++|+|+++.+|+||++++|+|
T Consensus       228 ~~l~~~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~  277 (319)
T PLN02213        228 NNSISGYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIA  277 (319)
T ss_pred             HHHhcCceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEee
Confidence            66667999999999999999999999999999999999999999887764

>PLN03016 sinapoylglucose-malate O-sinapoyltransferase

Probab=100.00  E-value=2.1e-34  Score=252.35  Aligned_cols=175  Identities=21%  Similarity=0.368  Sum_probs=136.0

Q ss_pred             CeeecCcCCccccchhHHHHHHHhcCCCHHHHHHHhccCCcc----ccccccchhhhHHhHHHhhhhhcccCCCC---C-
Q 029289            1 MQVGNALTDDYHDYLGLFQFWWSAGLISDDTYKQLKLLCDYE----SFIHPSCTASVSQSNRLLKRMHVVGHASE---K-   72 (196)
Q Consensus         1 i~IGNg~~dp~~q~~~~~~~a~~~glI~~~~~~~~~~~C~~~----~~~~~~C~~~~~~~~~~~~~~~~~~~~~~---~-   72 (196)
                      |+||||++||..|..++.+|+|+||||++++|+.+++.|...    ...+..|..+......+.+.++.++....   . 
T Consensus       203 i~iGNg~t~~~~~~~~~~~y~~~~glI~~~~~~~i~~~c~~~~~~~~~~~~~C~~~~~~~~~~~~~~n~yni~~~~~~~~  282 (433)
T PLN03016        203 YMLGNPVTYMDFEQNFRIPYAYGMGLISDEIYEPMKRICNGNYYNVDPSNTQCLKLTEEYHKCTAKINIHHILTPDCDVT  282 (433)
T ss_pred             eEecCCCcCchhhhhhHHHHHHhcCCCCHHHHHHHHHHhccccccCCCchHHHHHHHHHHHHHhcCCChhhccCCccccc
Confidence            689999999999999999999999999999999999999632    12345687766555455554444432211   0 


Q ss_pred             ---CCCCcc---chhhhccCcHHHHHhcCCCCCccccccccccchhhhhHHHHHHHhhhhccccccccccCCcchHHHHH
Q 029289           73 ---YDPCTE---KHSVVYFNQPEVQKALHVIPAVALAKWETCRWHQQHALMIFFIFTALQWGVVNNNWLDSPRIVLDIYH  146 (196)
Q Consensus        73 ---~~~c~~---~~~~~ylN~~~Vr~aLhv~~~~~~~~w~~c~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~s~~~~~~  146 (196)
                         ..+|..   ..+..|||+++||+||||++.. ..+|..|+..                  |.  +.....++++.+.
T Consensus       283 ~~~~~~c~~~~~~~~~~ylN~~~V~~aL~v~~~~-~~~w~~cn~~------------------v~--~~~d~~~~~~~~~  341 (433)
T PLN03016        283 NVTSPDCYYYPYHLIECWANDESVREALHIEKGS-KGKWARCNRT------------------IP--YNHDIVSSIPYHM  341 (433)
T ss_pred             ccCCCcccccchHHHHHHhCCHHHHHHhCCCCCC-CCCCccCCcc------------------cc--cccccchhhHHHH
Confidence               124653   3578999999999999998531 1379999988                  53  3333345666666


Q ss_pred             HHHHcCCeEEEeecCcccccchhhHHHHHHHcCCCCcccccccccCCcCC
Q 029289          147 ELIHSGLRIWMFSGDTDAVIPVTSARYSIDALNLPTVKPWRAWYDEGQVG  196 (196)
Q Consensus       147 ~LL~~girvLiYsGd~D~icn~~Gt~~~i~~L~w~~~~~~~~W~~~gqva  196 (196)
                      +++.+|+||||||||+|++||++||++|+++|+|+++++|+||++++|+|
T Consensus       342 ~~l~~~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~  391 (433)
T PLN03016        342 NNSISGYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIA  391 (433)
T ss_pred             HHHhcCceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEee
Confidence            67777999999999999999999999999999999999999999888764

>PLN02209 serine carboxypeptidase

Probab=100.00  E-value=1e-33  Score=248.18  Aligned_cols=175  Identities=22%  Similarity=0.348  Sum_probs=134.5

Q ss_pred             CeeecCcCCccccchhHHHHHHHhcCCCHHHHHHHhccCCcc----ccccccchhhhHHhHHHhhhhhcccCC-------
Q 029289            1 MQVGNALTDDYHDYLGLFQFWWSAGLISDDTYKQLKLLCDYE----SFIHPSCTASVSQSNRLLKRMHVVGHA-------   69 (196)
Q Consensus         1 i~IGNg~~dp~~q~~~~~~~a~~~glI~~~~~~~~~~~C~~~----~~~~~~C~~~~~~~~~~~~~~~~~~~~-------   69 (196)
                      |+||||++||..|..++.+|+|+||||++++|+.+++.|...    .+.+..|..++.....+.+.++.++..       
T Consensus       205 i~igng~td~~~q~~~~~~y~~~~glI~~~~~~~~~~~c~~~~~~~~~~~~~C~~~i~~~~~~~~~~~~~~~~~~~c~~~  284 (437)
T PLN02209        205 YVLGNPITHIEFEQNFRIPYAHGMSLISDELYESLKRICKGNYFSVDPSNKKCLKLVEEYHKCTDNINSHHTLIANCDDS  284 (437)
T ss_pred             EEecCcccChhhhhhhHHHHHhccCCCCHHHHHHHHHhcccccccCCCChHHHHHHHHHHHHHhhcCCcccccccccccc
Confidence            689999999999999999999999999999999999999631    123456877766554444444432111       


Q ss_pred             --CCCCCCCcc---chhhhccCcHHHHHhcCCCCCccccccccccchhhhhHHHHHHHhhhhccccccccccCCcchHHH
Q 029289           70 --SEKYDPCTE---KHSVVYFNQPEVQKALHVIPAVALAKWETCRWHQQHALMIFFIFTALQWGVVNNNWLDSPRIVLDI  144 (196)
Q Consensus        70 --~~~~~~c~~---~~~~~ylN~~~Vr~aLhv~~~~~~~~w~~c~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~s~~~~  144 (196)
                        .....+|..   ..+..|||+|+||+||||+... ...|..|+..                  +  .+.+...++++.
T Consensus       285 ~~~~~~~~c~~~~~~~~~~ylN~~~V~~aL~v~~~~-~~~w~~~~~~------------------~--~~~~d~~~~~~~  343 (437)
T PLN02209        285 NTQHISPDCYYYPYHLVECWANNESVREALHVDKGS-IGEWIRDHRG------------------I--PYKSDIRSSIPY  343 (437)
T ss_pred             ccccCCCCcccccHHHHHHHhCCHHHHHHhCCCCCC-CCCCccccch------------------h--hcccchhhhHHH
Confidence              111234643   3578999999999999998532 2479999865                  3  244444456666


Q ss_pred             HHHHHHcCCeEEEeecCcccccchhhHHHHHHHcCCCCcccccccccCCcCC
Q 029289          145 YHELIHSGLRIWMFSGDTDAVIPVTSARYSIDALNLPTVKPWRAWYDEGQVG  196 (196)
Q Consensus       145 ~~~LL~~girvLiYsGd~D~icn~~Gt~~~i~~L~w~~~~~~~~W~~~gqva  196 (196)
                      +.++|.+|+|||||+||+|++||++||++|+++|+|+++++|++|++++|+|
T Consensus       344 ~~~~l~~girVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~a  395 (437)
T PLN02209        344 HMNNSINGYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIA  395 (437)
T ss_pred             HHHHHhcCceEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEee
Confidence            6666668999999999999999999999999999999999999999988875

>PTZ00472 serine carboxypeptidase (CBP1); Provisional

Probab=99.98  E-value=1.2e-32  Score=243.33  Aligned_cols=174  Identities=23%  Similarity=0.429  Sum_probs=132.7

Q ss_pred             CeeecCcCCccccchhHHHHHHH-------hcCCCHHHHHHHhc---cC-------Cccc-cccccchhhhHHhHHHh--
Q 029289            1 MQVGNALTDDYHDYLGLFQFWWS-------AGLISDDTYKQLKL---LC-------DYES-FIHPSCTASVSQSNRLL--   60 (196)
Q Consensus         1 i~IGNg~~dp~~q~~~~~~~a~~-------~glI~~~~~~~~~~---~C-------~~~~-~~~~~C~~~~~~~~~~~--   60 (196)
                      |+|||||+||..|+.++.+|+|.       +|+|++++|+.+++   .|       .... .....|..+...+....  
T Consensus       209 i~IGNg~~dp~~q~~~~~~~a~~~~~~~~~~~li~~~~~~~~~~~~~~c~~~~~~c~~~~~~~~~~c~~a~~~c~~~~~~  288 (462)
T PTZ00472        209 LAVGNGLTDPYTQYASYPRLAWDWCKEKLGAPCVSEEAYDEMSSMVPACQKKIKECNSNPDDADSSCSVARALCNEYIAV  288 (462)
T ss_pred             EEEeccccChhhhcccHHHHhhhcccccCCCCccCHHHHHHHHHHHHHHHHHHHhccccCCCcchHHHHHHHHHHHHHHH
Confidence            68999999999999999999996       58999999998875   24       3211 12345755443332221  


Q ss_pred             ---hhhhcccCCCC-CCCCCcc-chhhhccCcHHHHHhcCCCCCccccccccccchhhhhHHHHHHHhhhhcccccccc-
Q 029289           61 ---KRMHVVGHASE-KYDPCTE-KHSVVYFNQPEVQKALHVIPAVALAKWETCRWHQQHALMIFFIFTALQWGVVNNNW-  134 (196)
Q Consensus        61 ---~~~~~~~~~~~-~~~~c~~-~~~~~ylN~~~Vr~aLhv~~~~~~~~w~~c~~~~~~~~~~~~~~~~~~~~~v~~~~-  134 (196)
                         ..++.|+.... ..++|.. ..+..|||+|+||+||||+.    .+|+.|+..                  |...+ 
T Consensus       289 ~~~~g~n~Ydi~~~c~~~~c~~~~~~~~yLN~~~Vq~AL~v~~----~~w~~c~~~------------------V~~~~~  346 (462)
T PTZ00472        289 YSATGLNNYDIRKPCIGPLCYNMDNTIAFMNREDVQSSLGVKP----ATWQSCNME------------------VNLMFE  346 (462)
T ss_pred             HHhcCCChhheeccCCCCCccCHHHHHHHhCCHHHHHHhCCCC----CCceeCCHH------------------HHHHhh
Confidence               22344544322 1234754 46899999999999999984    279999988                  54444 


Q ss_pred             ccCCcchHHHHHHHHHcCCeEEEeecCcccccchhhHHHHHHHcCCCCcc-----ccccc-ccCCcCC
Q 029289          135 LDSPRIVLDIYHELIHSGLRIWMFSGDTDAVIPVTSARYSIDALNLPTVK-----PWRAW-YDEGQVG  196 (196)
Q Consensus       135 ~d~~~s~~~~~~~LL~~girvLiYsGd~D~icn~~Gt~~~i~~L~w~~~~-----~~~~W-~~~gqva  196 (196)
                      .|.++++.+.++.||++|+|||||+||.|++||+.|+++|+++|+|++++     +|++| .+++|+|
T Consensus       347 ~D~~~~~~~~l~~LL~~gikVLiYnGd~D~icn~~Gt~~wi~~L~w~g~~~f~~a~~~~w~~~~~~v~  414 (462)
T PTZ00472        347 MDWMKNFNYTVPGLLEDGVRVMIYAGDMDFICNWIGNKAWTLALQWPGNAEFNAAPDVPFSAVDGRWA  414 (462)
T ss_pred             hccccchHHHHHHHHhcCceEEEEECCcCeecCcHhHHHHHHhCCCCCccchhhcCccccEecCCEec
Confidence            46678899999999999999999999999999999999999999999975     56899 4677664

>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=99.97  E-value=2.9e-32  Score=236.86  Aligned_cols=177  Identities=24%  Similarity=0.392  Sum_probs=129.0

Q ss_pred             CeeecCcCCccccchhHHHHHHHhcCCCHHHHHHHhccCCcc---ccccccchhhhHHhHH------HhhhhhcccCCCC
Q 029289            1 MQVGNALTDDYHDYLGLFQFWWSAGLISDDTYKQLKLLCDYE---SFIHPSCTASVSQSNR------LLKRMHVVGHASE   71 (196)
Q Consensus         1 i~IGNg~~dp~~q~~~~~~~a~~~glI~~~~~~~~~~~C~~~---~~~~~~C~~~~~~~~~------~~~~~~~~~~~~~   71 (196)
                      |+||||++||..|..++.+|+|.||+|++++++.+++.|...   ......|......+..      +...++.|+....
T Consensus       174 i~IGng~~dp~~~~~s~~~~~~~~gli~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~n~Ydi~~~  253 (415)
T PF00450_consen  174 IAIGNGWIDPRIQYNSYADYAYYHGLIDDQQYDDLNKACEACPQCQKAITECAAALDELSCQYAISQCNGGINPYDIRQP  253 (415)
T ss_dssp             EEEESE-SBHHHHHHHHHHHHHHTTSS-HHHHHHHHHHHTTSHSSSCCHHHHHHHHHHHHHHCHHHHHHTTSETTSTTSE
T ss_pred             ceecCccccccccceeecccccccCcccHHHHHHHHHHhhccccccchhhHHHHHHHhhhhhcccccccCCcceeeeecc
Confidence            689999999999999999999999999999999999988532   2233567655544332      2234555543222


Q ss_pred             C-------------CCCCccchhhhccCcHHHHHhcCCCCCccccccccccchhhhhHHHHHHHhhhhcccc-c-ccccc
Q 029289           72 K-------------YDPCTEKHSVVYFNQPEVQKALHVIPAVALAKWETCRWHQQHALMIFFIFTALQWGVV-N-NNWLD  136 (196)
Q Consensus        72 ~-------------~~~c~~~~~~~ylN~~~Vr~aLhv~~~~~~~~w~~c~~~~~~~~~~~~~~~~~~~~~v-~-~~~~d  136 (196)
                      .             .+++....+..|||+++||+||||+... ..+|+.|+..                  | . ....+
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~yln~~~Vr~aL~v~~~~-~~~w~~~~~~------------------V~~~~~~~d  314 (415)
T PF00450_consen  254 CYNPSRSSYDNSPSNDPPDDDYLEAYLNRPDVREALHVPVDS-NVNWQSCNDA------------------VNFNWLYDD  314 (415)
T ss_dssp             ETT-SHCTTCCCCTTTTTCHHHHHHHHTSHHHHHHTT-STTT-SSS--SB-HH------------------HHHHCCTCC
T ss_pred             ccccccccccccccccccchhhHHHHhccHHHHHhhCCCccc-CCcccccCcc------------------ccccccccc
Confidence            1             1122346789999999999999997211 2589999987                  5 1 12467


Q ss_pred             CCcchHHHHHHHHHcCCeEEEeecCcccccchhhHHHHHHHcCCCCccccccccc--CCcCC
Q 029289          137 SPRIVLDIYHELIHSGLRIWMFSGDTDAVIPVTSARYSIDALNLPTVKPWRAWYD--EGQVG  196 (196)
Q Consensus       137 ~~~s~~~~~~~LL~~girvLiYsGd~D~icn~~Gt~~~i~~L~w~~~~~~~~W~~--~gqva  196 (196)
                      .+.++.+.++.||++|+|||||+||+|++||+.||++||++|+|+++++|++|..  ++++|
T Consensus       315 ~~~~~~~~l~~lL~~~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~f~~~~~~~~~~~~  376 (415)
T PF00450_consen  315 FMPSSIPDLPELLDNGIRVLIYNGDLDLICNFLGTERWIDNLNWSGKDGFRQWPRKVNGQVA  376 (415)
T ss_dssp             C-SBCHHHHHHHHHTT-EEEEEEETT-SSS-HHHHHHHHHCTECTEEEEEEEEEEETTCSEE
T ss_pred             ccccchhhhhhhhhccceeEEeccCCCEEEEeccchhhhhccccCccccccccccccccccc
Confidence            7889999999999999999999999999999999999999999999999999986  66653

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....

>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]

Probab=99.56  E-value=4.5e-15  Score=123.24  Aligned_cols=165  Identities=13%  Similarity=0.120  Sum_probs=113.7

Q ss_pred             CeeecCcCCccccchhHHHHHHHhcCCCHHHHHHHhc---cCCcc-cc----ccccchhhhHH-hHHHhhhhhcccCC--
Q 029289            1 MQVGNALTDDYHDYLGLFQFWWSAGLISDDTYKQLKL---LCDYE-SF----IHPSCTASVSQ-SNRLLKRMHVVGHA--   69 (196)
Q Consensus         1 i~IGNg~~dp~~q~~~~~~~a~~~glI~~~~~~~~~~---~C~~~-~~----~~~~C~~~~~~-~~~~~~~~~~~~~~--   69 (196)
                      +++|+.||+|+.-..+..||++..+++++...++..+   .|.-. +.    ....|-...+. +.+..+..+-|+..  
T Consensus       159 VaLGDSWISP~D~V~SWGP~L~~~S~LDD~GLds~ns~A~k~~~~v~~g~~~~AT~~Wg~~e~li~~~sn~VdfYNil~~  238 (414)
T KOG1283|consen  159 VALGDSWISPEDFVFSWGPLLKHVSRLDDNGLDSSNSGAEKGKGGVDGGKWGGATGGWGGGENLISRESNGVDFYNILTK  238 (414)
T ss_pred             EEccCcccChhHhhhcchHHHHhhhhhcccCccchhhhHHhhcccccCCccccccccccCcCcceeecccCcceeeeecc
Confidence            5899999999999999999999999999998877655   34210 00    00111100000 00000000000000  


Q ss_pred             -----------------------CCCCC-CCccchhhhccCcHHHHHhcCCCCCccccccccccchhhhhHHHHHHHhhh
Q 029289           70 -----------------------SEKYD-PCTEKHSVVYFNQPEVQKALHVIPAVALAKWETCRWHQQHALMIFFIFTAL  125 (196)
Q Consensus        70 -----------------------~~~~~-~c~~~~~~~ylN~~~Vr~aLhv~~~~~~~~w~~c~~~~~~~~~~~~~~~~~  125 (196)
                                             ..... +-..+.+.++||-| ||++|++.+..  ..|..-+..              
T Consensus       239 t~~d~~~~ss~~~~~~~~~~rrl~~~~~~~~~~D~L~~lM~g~-vrkkLgIip~~--~~wGgqsg~--------------  301 (414)
T KOG1283|consen  239 TLGDQYSLSSRAAMTPEEVMRRLLVRFVGDEDRDKLSDLMNGP-VRKKLGIIPGG--VKWGGQSGD--------------  301 (414)
T ss_pred             CCCcchhhhhhhhcchHHHHHHHHhccCcchhHHHHHHHhccc-ccccccccCCC--CcccCcCCc--------------
Confidence                                   00000 01124588999987 99999998764  589888877              


Q ss_pred             hcccccccc-ccCCcchHHHHHHHHHcCCeEEEeecCcccccchhhHHHHHHHcCCCCcccc
Q 029289          126 QWGVVNNNW-LDSPRIVLDIYHELIHSGLRIWMFSGDTDAVIPVTSARYSIDALNLPTVKPW  186 (196)
Q Consensus       126 ~~~~v~~~~-~d~~~s~~~~~~~LL~~girvLiYsGd~D~icn~~Gt~~~i~~L~w~~~~~~  186 (196)
                          +..+. .|.+++++..+.+||++|+.|-||||++|.||++.|+++|+.+|.|+....+
T Consensus       302 ----vFt~lq~dFMKPvi~~VdeLL~~Gv~V~VynG~lDlIc~T~G~~AWv~~l~w~~~p~f  359 (414)
T KOG1283|consen  302 ----VFTKLQGDFMKPVISKVDELLNNGVNVTVYNGQLDLICATMGTEAWVEKLEWSAKPSF  359 (414)
T ss_pred             ----hHHHhhhhhcccHHHHHHHHHhCCceEEEEecccchhhcccchhhhhhheecCCCCcc
Confidence                43333 6889999999999999999999999999999999999999999999998754

>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]

Probab=99.18  E-value=2.3e-11  Score=106.80  Aligned_cols=164  Identities=16%  Similarity=0.216  Sum_probs=115.9

Q ss_pred             CeeecC-cCCccccchhHHHHHHH----hcCCCHHHHHHHhccCCccc-----------cccccchhhhHHhHHHhh---
Q 029289            1 MQVGNA-LTDDYHDYLGLFQFWWS----AGLISDDTYKQLKLLCDYES-----------FIHPSCTASVSQSNRLLK---   61 (196)
Q Consensus         1 i~IGNg-~~dp~~q~~~~~~~a~~----~glI~~~~~~~~~~~C~~~~-----------~~~~~C~~~~~~~~~~~~---   61 (196)
                      ++|||| +|||..|+..|.++|..    ++..+.+..+.+.+.|+...           .....|..+...+..+..   
T Consensus       235 vligng~~t~Pl~~~~~y~~~a~~~~~~~~~l~~e~~~~~~~~~~~d~~~~l~~g~~~~~~~~~c~~~~~~~~~~~~~~~  314 (498)
T COG2939         235 VLIGNGLWTDPLTQYLTYEPIAAEKGPYDGVLSSEECTKAEKYCAGDYCLALMKGCYDSGSLQPCENASAYLTGLMREYV  314 (498)
T ss_pred             eeecCCcccChhHHHHHhhhhHhhcCCCCCcCcHHHHHHHHHHhhhhhHhhhccCCCCchhhhHHHHHHHHHHhcchhhh
Confidence            589999 99999999999999985    45677777888888775321           112345544333322111   


Q ss_pred             ---h---hhcccCCCC-CCC----CCcc--chhhhccCcHHHHHhcCCCCCccccccccccchhhhhHHHHHHHhhhhcc
Q 029289           62 ---R---MHVVGHASE-KYD----PCTE--KHSVVYFNQPEVQKALHVIPAVALAKWETCRWHQQHALMIFFIFTALQWG  128 (196)
Q Consensus        62 ---~---~~~~~~~~~-~~~----~c~~--~~~~~ylN~~~Vr~aLhv~~~~~~~~w~~c~~~~~~~~~~~~~~~~~~~~  128 (196)
                         .   .+.|++... .+.    -|.+  ..+.+|++-+.++++++....    .|..|...                 
T Consensus       315 ~r~~~~~~n~y~~r~~~~d~g~~~~~y~~~~~~ld~~~~~~~~~~~~~~~d----~~~~c~t~-----------------  373 (498)
T COG2939         315 GRAGGRLLNVYDIREECRDPGLGGSCYDTLSTSLDYFNFDPEQEVNDPEVD----NISGCTTD-----------------  373 (498)
T ss_pred             ccccccccccccchhhcCCCCcccccccceeeccccccccchhcccccccc----chhccchH-----------------
Confidence               0   222322111 111    2443  357789998889999886543    79999988                 


Q ss_pred             cccccc----ccCCcchHHHHHHHHHcCCeEEEeecCcccccchhhHHHHHHHcCCCCcccc
Q 029289          129 VVNNNW----LDSPRIVLDIYHELIHSGLRIWMFSGDTDAVIPVTSARYSIDALNLPTVKPW  186 (196)
Q Consensus       129 ~v~~~~----~d~~~s~~~~~~~LL~~girvLiYsGd~D~icn~~Gt~~~i~~L~w~~~~~~  186 (196)
                       +..+|    .+..+.....+..++.+|+.+++|.||.|.+||+.|+++|..+|.|.+...|
T Consensus       374 -a~~~f~~~~~~~~~~~~~~~~~~lv~~~~~~~~~gd~d~icn~~~~~a~~~~Lkw~~~~g~  434 (498)
T COG2939         374 -AMTDFLTFTGGWAKPSRYLVLNLLVNNVWILLYAGDKDFICNLRGNMALDPKLKWLGASGY  434 (498)
T ss_pred             -HHHhhhhhcCCcccccHHHHhhhhhcCCceeeeecCchhHhhhhhhcccCCcceEeeecch
Confidence             44445    3555677777888888999999999999999999999999999999998754

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	196
1bcr_B	160	Complex Of The Wheat Serine Carboxypeptidase, Cpdw-		3e-27
1wht_B	153	Structure Of The Complex Of L-Benzylsuccinate With		5e-27
3sc2_B	152	Refined Atomic Model Of Wheat Serine Carboxypeptida		5e-27
1whs_B	153	Structure Of The Complex Of L-Benzylsuccinate With		5e-27
1gxs_B	158	Crystal Structure Of Hydroxynitrile Lyase From Sorg		2e-17
1bcr_A	263	Complex Of The Wheat Serine Carboxypeptidase, Cpdw-		2e-14
3sc2_A	259	Refined Atomic Model Of Wheat Serine Carboxypeptida		2e-14
1whs_A	255	Structure Of The Complex Of L-Benzylsuccinate With		2e-14
1wht_A	256	Structure Of The Complex Of L-Benzylsuccinate With		2e-14
1gxs_A	270	Crystal Structure Of Hydroxynitrile Lyase From Sorg		4e-06

>pdb|1BCR|B Chain B, Complex Of The Wheat Serine Carboxypeptidase, Cpdw-Ii, With The Microbial Peptide Aldehyde Inhibitor, Antipain, And Arginine At Room Temperature Length = 160

Iteration: 1
 Score =  117 bits (294), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 59/128 (46%), Positives = 77/128 (60%), Gaps = 19/128 (14%)
Query: 70  SEKYDPCTEKHSVVYFNQPEVQKALHVIPAVALA-KWETCRWHQQHALMIFFIFTALQWG 128
           +  YDPCTE++S  Y+N+ +VQ ALH     A+   W TC                    
Sbjct: 1   TGSYDPCTERYSTAYYNRRDVQMALHANVTGAMNYTWATCS------------------D 42
Query: 129 VVNNNWLDSPRIVLDIYHELIHSGLRIWMFSGDTDAVIPVTSARYSIDALNLPTVKPWRA 188
            +N +W D+PR +L IY ELI +GLRIW+FSGDTDAV+P+T+ RYSI AL LPT   W  
Sbjct: 43  TINTHWHDAPRSMLPIYRELIAAGLRIWVFSGDTDAVVPLTATRYSIGALGLPTTTSWYP 102
Query: 189 WYDEGQVG 196
           WYD+ +VG
Sbjct: 103 WYDDQEVG 110

>pdb|1WHT|B Chain B, Structure Of The Complex Of L-Benzylsuccinate With Wheat Serine Carboxypeptidase Ii At 2.0 Angstroms Resolution Length = 153

Iteration: 1
 Score =  117 bits (292), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 59/126 (46%), Positives = 76/126 (60%), Gaps = 19/126 (15%)
Query: 72  KYDPCTEKHSVVYFNQPEVQKALHVIPAVALA-KWETCRWHQQHALMIFFIFTALQWGVV 130
            YDPCTE++S  Y+N+ +VQ ALH     A+   W TC                     +
Sbjct: 1   SYDPCTERYSTAYYNRRDVQMALHANVTGAMNYTWATCS------------------DTI 42
Query: 131 NNNWLDSPRIVLDIYHELIHSGLRIWMFSGDTDAVIPVTSARYSIDALNLPTVKPWRAWY 190
           N +W D+PR +L IY ELI +GLRIW+FSGDTDAV+P+T+ RYSI AL LPT   W  WY
Sbjct: 43  NTHWHDAPRSMLPIYRELIAAGLRIWVFSGDTDAVVPLTATRYSIGALGLPTTTSWYPWY 102
Query: 191 DEGQVG 196
           D+ +VG
Sbjct: 103 DDQEVG 108

>pdb|3SC2|B Chain B, Refined Atomic Model Of Wheat Serine Carboxypeptidase Ii At 2.2- Angstroms Resolution Length = 152

Iteration: 1
 Score =  117 bits (292), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 59/126 (46%), Positives = 76/126 (60%), Gaps = 19/126 (15%)
Query: 72  KYDPCTEKHSVVYFNQPEVQKALHVIPAVALA-KWETCRWHQQHALMIFFIFTALQWGVV 130
            YDPCTE++S  Y+N+ +VQ ALH     A+   W TC                     +
Sbjct: 1   SYDPCTERYSTAYYNRRDVQMALHANVTGAMNYTWATCS------------------DTI 42
Query: 131 NNNWLDSPRIVLDIYHELIHSGLRIWMFSGDTDAVIPVTSARYSIDALNLPTVKPWRAWY 190
           N +W D+PR +L IY ELI +GLRIW+FSGDTDAV+P+T+ RYSI AL LPT   W  WY
Sbjct: 43  NTHWHDAPRSMLPIYRELIAAGLRIWVFSGDTDAVVPLTATRYSIGALGLPTTTSWYPWY 102
Query: 191 DEGQVG 196
           D+ +VG
Sbjct: 103 DDQEVG 108

>pdb|1WHS|B Chain B, Structure Of The Complex Of L-Benzylsuccinate With Wheat Serine Carboxypeptidase Ii At 2.0 Angstroms Resolution Length = 153

Iteration: 1
 Score =  117 bits (292), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 59/126 (46%), Positives = 76/126 (60%), Gaps = 19/126 (15%)
Query: 72  KYDPCTEKHSVVYFNQPEVQKALHVIPAVALA-KWETCRWHQQHALMIFFIFTALQWGVV 130
            YDPCTE++S  Y+N+ +VQ ALH     A+   W TC                     +
Sbjct: 1   SYDPCTERYSTAYYNRRDVQMALHANVTGAMNYTWATCS------------------DTI 42
Query: 131 NNNWLDSPRIVLDIYHELIHSGLRIWMFSGDTDAVIPVTSARYSIDALNLPTVKPWRAWY 190
           N +W D+PR +L IY ELI +GLRIW+FSGDTDAV+P+T+ RYSI AL LPT   W  WY
Sbjct: 43  NTHWHDAPRSMLPIYRELIAAGLRIWVFSGDTDAVVPLTATRYSIGALGLPTTTSWYPWY 102
Query: 191 DEGQVG 196
           D+ +VG
Sbjct: 103 DDQEVG 108

>pdb|1GXS|B Chain B, Crystal Structure Of Hydroxynitrile Lyase From Sorghum Bicolor In Complex With Inhibitor Benzoic Acid: A Novel Cyanogenic Enzyme Length = 158

Iteration: 1
 Score = 85.5 bits (210), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 51/129 (39%), Positives = 69/129 (53%), Gaps = 22/129 (17%)
Query: 72  KYDPCTEKHSVVYFNQPEVQKALHV-IPAVALAKWETCRWHQQHALMIFFIFTALQWGVV 130
            YDPC   +S+ Y N PEVQ ALH  +  +    W  C      +  IF      QWG  
Sbjct: 3   PYDPCAVFNSINYLNLPEVQTALHANVSGIVEYPWTVC------SNTIFD-----QWGQA 51
Query: 131 NNNWLDSPRIVLDIYHELIHSGLRIWMFSGDTDAVIPVTSARYSIDALNLPTVKPWRAWY 190
            ++       +L +Y ELI +GLR+W++SGDTD+V+PV+S R S+ AL LP    W  WY
Sbjct: 52  ADD-------LLPVYRELIQAGLRVWVYSGDTDSVVPVSSTRRSLAALELPVKTSWYPWY 104
Query: 191 ---DEGQVG 196
               E +VG
Sbjct: 105 MAPTEREVG 113

>pdb|1BCR|A Chain A, Complex Of The Wheat Serine Carboxypeptidase, Cpdw-Ii, With The Microbial Peptide Aldehyde Inhibitor, Antipain, And Arginine At Room Temperature Length = 263

Iteration: 1
 Score = 75.5 bits (184), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 32/55 (58%), Positives = 42/55 (76%), Gaps = 2/55 (3%)
Query: 1   MQVGNALTDDYHDYLGLFQFWWSAGLISDDTYKQLKLLCDYESFIHPS--CTASV 53
             VGN L DDYHDY+G F+FWW+ G++SDDTY++LK  C ++SFIHPS  C A+ 
Sbjct: 184 FMVGNGLIDDYHDYVGTFEFWWNHGIVSDDTYRRLKEACLHDSFIHPSPACDAAT 238

>pdb|3SC2|A Chain A, Refined Atomic Model Of Wheat Serine Carboxypeptidase Ii At 2.2- Angstroms Resolution Length = 259

Iteration: 1
 Score = 75.1 bits (183), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 32/55 (58%), Positives = 42/55 (76%), Gaps = 2/55 (3%)
Query: 1   MQVGNALTDDYHDYLGLFQFWWSAGLISDDTYKQLKLLCDYESFIHPS--CTASV 53
             VGN L DDYHDY+G F+FWW+ G++SDDTY++LK  C ++SFIHPS  C A+ 
Sbjct: 184 FMVGNGLIDDYHDYVGTFEFWWNHGIVSDDTYRRLKEACLHDSFIHPSPACDAAT 238

>pdb|1WHS|A Chain A, Structure Of The Complex Of L-Benzylsuccinate With Wheat Serine Carboxypeptidase Ii At 2.0 Angstroms Resolution Length = 255

Iteration: 1
 Score = 75.1 bits (183), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 32/55 (58%), Positives = 42/55 (76%), Gaps = 2/55 (3%)
Query: 1   MQVGNALTDDYHDYLGLFQFWWSAGLISDDTYKQLKLLCDYESFIHPS--CTASV 53
             VGN L DDYHDY+G F+FWW+ G++SDDTY++LK  C ++SFIHPS  C A+ 
Sbjct: 179 FMVGNGLIDDYHDYVGTFEFWWNHGIVSDDTYRRLKEACLHDSFIHPSPACDAAT 233

>pdb|1WHT|A Chain A, Structure Of The Complex Of L-Benzylsuccinate With Wheat Serine Carboxypeptidase Ii At 2.0 Angstroms Resolution Length = 256

Iteration: 1
 Score = 75.1 bits (183), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 32/55 (58%), Positives = 42/55 (76%), Gaps = 2/55 (3%)
Query: 1   MQVGNALTDDYHDYLGLFQFWWSAGLISDDTYKQLKLLCDYESFIHPS--CTASV 53
             VGN L DDYHDY+G F+FWW+ G++SDDTY++LK  C ++SFIHPS  C A+ 
Sbjct: 180 FMVGNGLIDDYHDYVGTFEFWWNHGIVSDDTYRRLKEACLHDSFIHPSPACDAAT 234

>pdb|1GXS|A Chain A, Crystal Structure Of Hydroxynitrile Lyase From Sorghum Bicolor In Complex With Inhibitor Benzoic Acid: A Novel Cyanogenic Enzyme Length = 270

Iteration: 1
 Score = 47.8 bits (112), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 2/50 (4%)
Query: 3   VGNALTDDYHDYLGLFQFWWSAGLISDDTYKQLKLLCDYESFIHPS--CT 50
           V + LT+D+ D +G+F+ WW  GLISD+T      +C   SF+HP+  CT
Sbjct: 186 VSSGLTNDHEDMIGMFESWWHHGLISDETRDSGLKVCPGTSFMHPTPECT 235

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	196
1ivy_A	452	Human protective protein; carboxypeptidase, serine	1e-37
1ac5_A	483	KEX1(delta)P; carboxypeptidase, hydrolase, glycopr	1e-36
1whs_B	153	Serine carboxypeptidase II; HET: NAG FUC; 2.00A {T	3e-36
1gxs_B	158	P-(S)-hydroxymandelonitrIle lyase chain B; inhibit	7e-34
1cpy_A	421	Serine carboxypeptidase; hydrolase (carboxypeptida	1e-33
1whs_A	255	Serine carboxypeptidase II; HET: NAG FUC; 2.00A {T	8e-13
1gxs_A	270	P-(S)-hydroxymandelonitrIle lyase chain A; inhibit	2e-12

>1ivy_A Human protective protein; carboxypeptidase, serine carboxypeptidase, protective protei glycoprotein, zymogen; HET: NAG NDG; 2.20A {Homo sapiens} SCOP: c.69.1.5 Length = 452

 Score =  133 bits (337), Expect = 1e-37
 Identities = 40/255 (15%), Positives = 76/255 (29%), Gaps = 81/255 (31%)

Query: 3   VGNALTDDYHDYLGLFQFWWSAGLISDDTYKQLKLLCDYESFIH------PSCTASVSQS 56
           VGN L+    +   L  F +  GL+ +  +  L+  C  ++  +        C  ++ + 
Sbjct: 176 VGNGLSSYEQNDNSLVYFAYYHGLLGNRLWSSLQTHCCSQNKCNFYDNKDLECVTNLQEV 235

Query: 57  NRLL------------------------------------------------KRMHVVGH 68
            R++                                                + +   G 
Sbjct: 236 ARIVGNSGLNIYNLYAPCAGGVPSHFRYEKDTVVVQDLGNIFTRLPLKRMWHQALLRSGD 295

Query: 69  ASEKYDPCTE-KHSVVYFNQPEVQKALHVIPAVALAKWETCRWHQQHALMIFFIFTALQW 127
                 PCT    +  Y N P V+KAL++   +   +W+ C                   
Sbjct: 296 KVRMDPPCTNTTAASTYLNNPYVRKALNIPEQLP--QWDMCN------------------ 335

Query: 128 GVVNNNWLDSPRIVLDIYHE-LIHSGLRIWMFSGDTDAVIPVTSARYSIDALNLPTVKPW 186
            +VN  +    R +   Y + L     +I +++GD D         + +D+LN       
Sbjct: 336 FLVNLQYRRLYRSMNSQYLKLLSSQKYQILLYNGDVDMACNFMGDEWFVDSLNQKMEVQR 395

Query: 187 RAWY-----DEGQVG 196
           R W         Q+ 
Sbjct: 396 RPWLVKYGDSGEQIA 410

>1ac5_A KEX1(delta)P; carboxypeptidase, hydrolase, glycoprotein, transmembrane; HET: NAG; 2.40A {Saccharomyces cerevisiae} SCOP: c.69.1.5 Length = 483

 Score =  131 bits (332), Expect = 1e-36
 Identities = 34/230 (14%), Positives = 58/230 (25%), Gaps = 57/230 (24%)

Query: 3   VGNALTDDYHDYLGLFQFWWSAGLISDDTYKQLKLL------------CDYESFIHPSCT 50
           +GN   D     L    F     LI +       L                +   H S  
Sbjct: 210 IGNGWIDPNTQSLSYLPFAMEKKLIDESNPNFKHLTNAHENCQNLINSASTDEAAHFSYQ 269

Query: 51  ASVSQSNRLLK-------------------RMHVVGHASEKYDPCTEKHSVVYFNQPEVQ 91
              +  N LL                     +     +     P        +F+ P V 
Sbjct: 270 ECENILNLLLSYTRESSQKGTADCLNMYNFNLKDSYPSCGMNWPKDISFVSKFFSTPGVI 329

Query: 92  KALHVIPAVALAKWETCRWHQQHALMIFFIFTALQWGVVNNNWL-DSPRIVLDIYHELIH 150
            +LH+  +  +  W+ C                     V         +  + +   L+ 
Sbjct: 330 DSLHL-DSDKIDHWKECT------------------NSVGTKLSNPISKPSIHLLPGLLE 370

Query: 151 SGLRIWMFSGDTDAVIPVTSARYSIDALNLP------TVKPWRAWYDEGQ 194
           SG+ I +F+GD D +        +ID L                W  + +
Sbjct: 371 SGIEIVLFNGDKDLICNNKGVLDTIDNLKWGGIKGFSDDAVSFDWIHKSK 420

>1whs_B Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1wht_B* 1bcs_B* 1bcr_B* 3sc2_B* Length = 153

 Score =  123 bits (310), Expect = 3e-36
 Identities = 59/125 (47%), Positives = 76/125 (60%), Gaps = 19/125 (15%)

Query: 73  YDPCTEKHSVVYFNQPEVQKALHVIPAVAL-AKWETCRWHQQHALMIFFIFTALQWGVVN 131
           YDPCTE++S  Y+N+ +VQ ALH     A+   W TC                     +N
Sbjct: 2   YDPCTERYSTAYYNRRDVQMALHANVTGAMNYTWATCSD------------------TIN 43

Query: 132 NNWLDSPRIVLDIYHELIHSGLRIWMFSGDTDAVIPVTSARYSIDALNLPTVKPWRAWYD 191
            +W D+PR +L IY ELI +GLRIW+FSGDTDAV+P+T+ RYSI AL LPT   W  WYD
Sbjct: 44  THWHDAPRSMLPIYRELIAAGLRIWVFSGDTDAVVPLTATRYSIGALGLPTTTSWYPWYD 103

Query: 192 EGQVG 196
           + +VG
Sbjct: 104 DQEVG 108

>1gxs_B P-(S)-hydroxymandelonitrIle lyase chain B; inhibitor complex, cyanogenesis mechanism; HET: NAG FUL DKA; 2.3A {Sorghum bicolor} SCOP: c.69.1.5 Length = 158

 Score =  117 bits (294), Expect = 7e-34
 Identities = 47/128 (36%), Positives = 64/128 (50%), Gaps = 22/128 (17%)

Query: 73  YDPCTEKHSVVYFNQPEVQKALHVIP-AVALAKWETCRWHQQHALMIFFIFTALQWGVVN 131
           YDPC   +S+ Y N PEVQ ALH     +    W  C                     + 
Sbjct: 4   YDPCAVFNSINYLNLPEVQTALHANVSGIVEYPWTVCS------------------NTIF 45

Query: 132 NNWLDSPRIVLDIYHELIHSGLRIWMFSGDTDAVIPVTSARYSIDALNLPTVKPWRAWY- 190
           + W  +   +L +Y ELI +GLR+W++SGDTD+V+PV+S R S+ AL LP    W  WY 
Sbjct: 46  DQWGQAADDLLPVYRELIQAGLRVWVYSGDTDSVVPVSSTRRSLAALELPVKTSWYPWYM 105

Query: 191 --DEGQVG 196
              E +VG
Sbjct: 106 APTEREVG 113

>1cpy_A Serine carboxypeptidase; hydrolase (carboxypeptidase); HET: NAG; 2.60A {Saccharomyces cerevisiae} SCOP: c.69.1.5 PDB: 1wpx_A* 1ysc_A* Length = 421

 Score =  123 bits (310), Expect = 1e-33
 Identities = 37/227 (16%), Positives = 69/227 (30%), Gaps = 55/227 (24%)

Query: 3   VGNALTDDYHDYLGLFQFWWSAGLISD----DTYKQLKLLCD---------YESFIHPSC 49
           +GN LTD    Y          G        +    ++   +         Y+S    SC
Sbjct: 174 IGNGLTDPLTQYNYYEPMACGEGGEPSVLPSEECSAMEDSLERCLGLIESCYDSQSVWSC 233

Query: 50  TASVSQSNRLL--------KRMHVVGHASEKYDPC--TEKHSVVYFNQPEVQKALHVIPA 99
             +    N           + ++ +    E  + C  T +    Y NQ  V++A+     
Sbjct: 234 VPATIYCNNAQLAPYQRTGRNVYDIRKDCEGGNLCYPTLQDIDDYLNQDYVKEAVGA--- 290

Query: 100 VALAKWETCRWHQQHALMIFFIFTALQWGVVNNNWL---DSPRIVLDIYHELIHSGLRIW 156
             +  +E+C                     +N N+L   D  +       +L++  L I 
Sbjct: 291 -EVDHYESCN------------------FDINRNFLFAGDWMKPYHTAVTDLLNQDLPIL 331

Query: 157 MFSGDTDAVIPVTSARYSIDALNLP-----TVKPWRAWY--DEGQVG 196
           +++GD D +      +   D L          +  R W      +V 
Sbjct: 332 VYAGDKDFICNWLGNKAWTDVLPWKYDEEFASQKVRNWTASITDEVA 378

>1whs_A Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1bcs_A* 1bcr_A* 1wht_A* 3sc2_A* Length = 255

 Score = 63.9 bits (156), Expect = 8e-13
 Identities = 32/63 (50%), Positives = 44/63 (69%), Gaps = 2/63 (3%)

Query: 3   VGNALTDDYHDYLGLFQFWWSAGLISDDTYKQLKLLCDYESFIHPS--CTASVSQSNRLL 60
           VGN L DDYHDY+G F+FWW+ G++SDDTY++LK  C ++SFIHPS  C A+   +    
Sbjct: 181 VGNGLIDDYHDYVGTFEFWWNHGIVSDDTYRRLKEACLHDSFIHPSPACDAATDVATAEQ 240

Query: 61  KRM 63
             +
Sbjct: 241 GNI 243

>1gxs_A P-(S)-hydroxymandelonitrIle lyase chain A; inhibitor complex, cyanogenesis mechanism; HET: NAG FUL DKA; 2.3A {Sorghum bicolor} SCOP: c.69.1.5 Length = 270

 Score = 63.1 bits (154), Expect = 2e-12
 Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 2/63 (3%)

Query: 3   VGNALTDDYHDYLGLFQFWWSAGLISDDTYKQLKLLCDYESFIHPS--CTASVSQSNRLL 60
           V + LT+D+ D +G+F+ WW  GLISD+T      +C   SF+HP+  CT   +++    
Sbjct: 186 VSSGLTNDHEDMIGMFESWWHHGLISDETRDSGLKVCPGTSFMHPTPECTEVWNKALAEQ 245

Query: 61  KRM 63
             +
Sbjct: 246 GNI 248

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	196
1ivy_A	452	Human protective protein; carboxypeptidase, serine	100.0
1ac5_A	483	KEX1(delta)P; carboxypeptidase, hydrolase, glycopr	100.0
1cpy_A	421	Serine carboxypeptidase; hydrolase (carboxypeptida	99.98
1whs_B	153	Serine carboxypeptidase II; HET: NAG FUC; 2.00A {T	99.97
1gxs_B	158	P-(S)-hydroxymandelonitrIle lyase chain B; inhibit	99.97
4az3_B	155	Lysosomal protective protein 20 kDa chain; hydrola	99.95
4az3_A	300	Lysosomal protective protein 32 kDa chain; hydrola	99.47
1gxs_A	270	P-(S)-hydroxymandelonitrIle lyase chain A; inhibit	98.86
1whs_A	255	Serine carboxypeptidase II; HET: NAG FUC; 2.00A {T	98.77

>1ivy_A Human protective protein; carboxypeptidase, serine carboxypeptidase, protective protei glycoprotein, zymogen; HET: NAG NDG; 2.20A {Homo sapiens} SCOP: c.69.1.5

Probab=100.00  E-value=2.4e-36  Score=265.27  Aligned_cols=172  Identities=23%  Similarity=0.454  Sum_probs=139.3

Q ss_pred             CeeecCcCCccccchhHHHHHHHhcCCCHHHHHHHhccCCc------cccccccchhhhHHhHHHh--hhhhcccCCC--
Q 029289            1 MQVGNALTDDYHDYLGLFQFWWSAGLISDDTYKQLKLLCDY------ESFIHPSCTASVSQSNRLL--KRMHVVGHAS--   70 (196)
Q Consensus         1 i~IGNg~~dp~~q~~~~~~~a~~~glI~~~~~~~~~~~C~~------~~~~~~~C~~~~~~~~~~~--~~~~~~~~~~--   70 (196)
                      |+||||++||..|..++++|+|+||||++++|+.+++.|..      .......|..+...+....  ..++.|+...  
T Consensus       174 ~~ign~~~d~~~~~~~~~~~~~~~glis~~~~~~~~~~c~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~in~Y~i~~~C  253 (452)
T 1ivy_A          174 LAVGNGLSSYEQNDNSLVYFAYYHGLLGNRLWSSLQTHCCSQNKCNFYDNKDLECVTNLQEVARIVGNSGLNIYNLYAPC  253 (452)
T ss_dssp             EEEESCCSBHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHEETTEECCSSCCCHHHHHHHHHHHHHHHSSSCCTTCTTSCC
T ss_pred             EEecCCccChhhhhhhHHHHHhhhhcCCHHHHHHHHHHhhhcccccccccchHHHHHHHHHHHHHHhcCCCccccccccc
Confidence            58999999999999999999999999999999999987752      2233446887665544432  3334332110  


Q ss_pred             -------------------------------------------CCCC-CCcc-chhhhccCcHHHHHhcCCCCCcccccc
Q 029289           71 -------------------------------------------EKYD-PCTE-KHSVVYFNQPEVQKALHVIPAVALAKW  105 (196)
Q Consensus        71 -------------------------------------------~~~~-~c~~-~~~~~ylN~~~Vr~aLhv~~~~~~~~w  105 (196)
                                                                 ..++ ||.+ ..+..|||+++||+||||+.+.  .+|
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pc~~~~~~~~ylN~~~Vq~ALhv~~~~--~~W  331 (452)
T 1ivy_A          254 AGGVPSHFRYEKDTVVVQDLGNIFTRLPLKRMWHQALLRSGDKVRMDPPCTNTTAASTYLNNPYVRKALNIPEQL--PQW  331 (452)
T ss_dssp             TTCCSSSEEEETTEEEECCCSCSSTTSCCCCCCGGGHHHHTCEEEECCTTCCCHHHHHHHTSHHHHHHTTCCTTS--CCC
T ss_pred             ccccccccchhcccccccccchhhhhhhhccccccccccccccccCCCCccchHHHHHHhCcHHHHHHcCCCCCC--Ccc
Confidence                                                       0112 7854 5678999999999999998542  479


Q ss_pred             ccccchhhhhHHHHHHHhhhhccccccccccCCcchHHHHHHHHHc-CCeEEEeecCcccccchhhHHHHHHHcCCCCcc
Q 029289          106 ETCRWHQQHALMIFFIFTALQWGVVNNNWLDSPRIVLDIYHELIHS-GLRIWMFSGDTDAVIPVTSARYSIDALNLPTVK  184 (196)
Q Consensus       106 ~~c~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~s~~~~~~~LL~~-girvLiYsGd~D~icn~~Gt~~~i~~L~w~~~~  184 (196)
                      +.||..                  |...+.+...+++|.+++||++ |+||||||||+|++||++||++||++|+|++..
T Consensus       332 ~~Cs~~------------------V~~~~~~~~~s~~~~~~~LL~~~girVlIYsGD~D~icn~~Gt~~wi~~L~~~~~~  393 (452)
T 1ivy_A          332 DMCNFL------------------VNLQYRRLYRSMNSQYLKLLSSQKYQILLYNGDVDMACNFMGDEWFVDSLNQKMEV  393 (452)
T ss_dssp             CSBCHH------------------HHHHCBCCCSBSHHHHHHHHHHTCCEEEEEEETTCSSSCHHHHHHHHHHTCCCEEE
T ss_pred             ccCcHH------------------HHhhhhcccccHHHHHHHHHhccCceEEEEeCCCCccCCcHHHHHHHHhcCCcccc
Confidence            999988                  6545778888999999999998 999999999999999999999999999999999


Q ss_pred             cccccccC
Q 029289          185 PWRAWYDE  192 (196)
Q Consensus       185 ~~~~W~~~  192 (196)
                      +|+||+++
T Consensus       394 ~~~pw~~~  401 (452)
T 1ivy_A          394 QRRPWLVK  401 (452)
T ss_dssp             EEEEEEEE
T ss_pred             cceeeeec
Confidence            99999875

>1ac5_A KEX1(delta)P; carboxypeptidase, hydrolase, glycoprotein, transmembrane; HET: NAG; 2.40A {Saccharomyces cerevisiae} SCOP: c.69.1.5

Probab=100.00  E-value=1.1e-34  Score=256.57  Aligned_cols=174  Identities=20%  Similarity=0.392  Sum_probs=131.5

Q ss_pred             CeeecCcCCccccchhHHHHHHHhcCCCHHH--HHHHhc---cCCcc-c---------cccccchhhhHHhHHHhhh---
Q 029289            1 MQVGNALTDDYHDYLGLFQFWWSAGLISDDT--YKQLKL---LCDYE-S---------FIHPSCTASVSQSNRLLKR---   62 (196)
Q Consensus         1 i~IGNg~~dp~~q~~~~~~~a~~~glI~~~~--~~~~~~---~C~~~-~---------~~~~~C~~~~~~~~~~~~~---   62 (196)
                      |+||||++||..|+.++.+|+|+||||+++.  |+.+++   .|... .         .....|..+...+......   
T Consensus       208 i~IGNg~~d~~~~~~~~~~f~~~~gli~~~~~~~~~~~~~~~~C~~~i~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~  287 (483)
T 1ac5_A          208 LLIGNGWIDPNTQSLSYLPFAMEKKLIDESNPNFKHLTNAHENCQNLINSASTDEAAHFSYQECENILNLLLSYTRESSQ  287 (483)
T ss_dssp             EEEEEECCCHHHHHTTHHHHHHHTTSCCTTSTTHHHHHHHHHHHHHHHHHCCSGGGGSSSCHHHHTHHHHHHHHTCCCCT
T ss_pred             eEecCCcccchhhhccHHHHHHhCCCCCccHHHHHHHHHHHHHHHHHHHhccccccccccHHHHHHHHHHHHHHhhcccc
Confidence            5899999999999999999999999999886  666544   67421 1         0124576665544433221   


Q ss_pred             ------hhcccCC-CCCCCCCcc------chhhhccCcHHHHHhcCCCCCccccccccccchhhhhHHHHHHHhhhhccc
Q 029289           63 ------MHVVGHA-SEKYDPCTE------KHSVVYFNQPEVQKALHVIPAVALAKWETCRWHQQHALMIFFIFTALQWGV  129 (196)
Q Consensus        63 ------~~~~~~~-~~~~~~c~~------~~~~~ylN~~~Vr~aLhv~~~~~~~~w~~c~~~~~~~~~~~~~~~~~~~~~  129 (196)
                            ++.|+.. ...+++|..      .++..|||+++||+||||+... ..+|+.||..                  
T Consensus       288 ~~~~~c~n~ydi~~~~~~~~c~~~~~~~~~~~~~ylN~~~Vq~ALhv~~~~-~~~w~~Cs~~------------------  348 (483)
T 1ac5_A          288 KGTADCLNMYNFNLKDSYPSCGMNWPKDISFVSKFFSTPGVIDSLHLDSDK-IDHWKECTNS------------------  348 (483)
T ss_dssp             TSTTSEEETTEEEEEECTTTTTTTCCTHHHHHHHHHTSTTHHHHTTCCTTT-CCCCCSBCHH------------------
T ss_pred             cccccCcccccccccCCCCCcccccccchhHHHHHhCCHHHHHHhCCCCCC-CCCeeeCchh------------------
Confidence                  1222221 123456753      3578999999999999998742 1379999988                  


Q ss_pred             ccccc-ccCCcchHHHHHHHHHcCCeEEEeecCcccccchhhHHHHHHHcCCCCcc------cccccccCC
Q 029289          130 VNNNW-LDSPRIVLDIYHELIHSGLRIWMFSGDTDAVIPVTSARYSIDALNLPTVK------PWRAWYDEG  193 (196)
Q Consensus       130 v~~~~-~d~~~s~~~~~~~LL~~girvLiYsGd~D~icn~~Gt~~~i~~L~w~~~~------~~~~W~~~g  193 (196)
                      |...+ .|.+++++++++.||++|+|||||+||+|++||++||++|+++|+|+++.      +|+||++++
T Consensus       349 V~~~~~~d~~~~~~~~l~~LL~~girVLIYsGD~D~icn~~Gt~~~i~~L~W~g~~~f~~~~~~~~W~~~~  419 (483)
T 1ac5_A          349 VGTKLSNPISKPSIHLLPGLLESGIEIVLFNGDKDLICNNKGVLDTIDNLKWGGIKGFSDDAVSFDWIHKS  419 (483)
T ss_dssp             HHHHCCCSSCCCGGGGHHHHHHTTCEEEEEEETTCSTTCHHHHHHHHHHCEETTEESSCTTCEEEEEEECS
T ss_pred             HHHHhcCCCcCcHHHHHHHHHhcCceEEEEECCcCcccCcHHHHHHHHhcCcccccccccCCCceeeEECC
Confidence            54444 45678899999999999999999999999999999999999999998854      468998765

>1cpy_A Serine carboxypeptidase; hydrolase (carboxypeptidase); HET: NAG; 2.60A {Saccharomyces cerevisiae} SCOP: c.69.1.5 PDB: 1wpx_A* 1ysc_A*

Probab=99.98  E-value=1.3e-33  Score=245.68  Aligned_cols=174  Identities=20%  Similarity=0.263  Sum_probs=131.7

Q ss_pred             CeeecCcCCccccchhHHHHHHHhc----CCCHHHHHHHhcc---CCcc------ccccccchhhhHHhHHHh------h
Q 029289            1 MQVGNALTDDYHDYLGLFQFWWSAG----LISDDTYKQLKLL---CDYE------SFIHPSCTASVSQSNRLL------K   61 (196)
Q Consensus         1 i~IGNg~~dp~~q~~~~~~~a~~~g----lI~~~~~~~~~~~---C~~~------~~~~~~C~~~~~~~~~~~------~   61 (196)
                      |+||||++||..|+.++.+|+|++|    +|++++++.+++.   |...      ......|..+...+....      .
T Consensus       172 i~IGNg~~dp~~q~~~~~~~a~~~g~~~~li~~~~~~~~~~~~~~c~~~i~~c~~~~~~~~c~~a~~~c~~~~~~~~~~~  251 (421)
T 1cpy_A          172 VLIGNGLTDPLTQYNYYEPMACGEGGEPSVLPSEECSAMEDSLERCLGLIESCYDSQSVWSCVPATIYCNNAQLAPYQRT  251 (421)
T ss_dssp             EEEESCCCCHHHHGGGHHHHHTTCSSSCCCSCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTHHHHHH
T ss_pred             EEecCcccChhhhhhhHHHHHhhcCCCCccCCHHHHHHHHHHHHHHHHHHHhhhcccccchhhHHHHHHHHHHHHHHhcC
Confidence            5899999999999999999999886    9999999877653   4311      011123433332222111      1


Q ss_pred             hhhcccCCCC--CCCCCcc--chhhhccCcHHHHHhcCCCCCccccccccccchhhhhHHHHHHHhhhhcccccccc---
Q 029289           62 RMHVVGHASE--KYDPCTE--KHSVVYFNQPEVQKALHVIPAVALAKWETCRWHQQHALMIFFIFTALQWGVVNNNW---  134 (196)
Q Consensus        62 ~~~~~~~~~~--~~~~c~~--~~~~~ylN~~~Vr~aLhv~~~~~~~~w~~c~~~~~~~~~~~~~~~~~~~~~v~~~~---  134 (196)
                      .++.|++...  ..++|.+  .++..|||+++||+||||+..    .|+.||..                  |..+|   
T Consensus       252 ~~n~Ydi~~~c~~~~~c~~~~~~~~~ylN~~~V~~AL~v~~~----~w~~cs~~------------------V~~~~~~~  309 (421)
T 1cpy_A          252 GRNVYDIRKDCEGGNLCYPTLQDIDDYLNQDYVKEAVGAEVD----HYESCNFD------------------INRNFLFA  309 (421)
T ss_dssp             CCBTTBSSSCCCSSSCSSTHHHHHHHHHHSHHHHHHTTCCCS----CCCSBCHH------------------HHHHHHTT
T ss_pred             CCChhhccccCCCCCccccchhHHHHHhCCHHHHHHhCCCCC----ceEECchh------------------Hhhhhhhc
Confidence            2445554332  1235764  568899999999999999864    69999988                  43333   


Q ss_pred             ccCCcchHHHHHHHHHcCCeEEEeecCcccccchhhHHHHHHHcCCCCcc-----ccccccc--CCcCC
Q 029289          135 LDSPRIVLDIYHELIHSGLRIWMFSGDTDAVIPVTSARYSIDALNLPTVK-----PWRAWYD--EGQVG  196 (196)
Q Consensus       135 ~d~~~s~~~~~~~LL~~girvLiYsGd~D~icn~~Gt~~~i~~L~w~~~~-----~~~~W~~--~gqva  196 (196)
                      .|.+++..+.+++||++|+|||||+||+|++||++||++||++|+|++.+     +|+||++  ++|||
T Consensus       310 ~d~~~p~~~~l~~LL~~girVlIysGd~D~i~~~~Gt~~wi~~L~w~~~~~F~~a~~~~w~~~~~~~va  378 (421)
T 1cpy_A          310 GDWMKPYHTAVTDLLNQDLPILVYAGDKDFICNWLGNKAWTDVLPWKYDEEFASQKVRNWTASITDEVA  378 (421)
T ss_dssp             TGGGSCTHHHHHHHHHTTCCEEEEEETTCSTTCHHHHHHHHHHCCSTTHHHHHHSCCEEEECTTTCSEE
T ss_pred             CCcccchHHHHHHHHhcCCeEEEEECCcccccChHHHHHHHHhccCccchhhhhccccceEEcCCCcee
Confidence            46677888999999999999999999999999999999999999999976     7999997  77764

>1whs_B Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1wht_B* 1bcs_B* 1bcr_B* 3sc2_B*

Probab=99.97  E-value=1.5e-32  Score=208.96  Aligned_cols=107  Identities=54%  Similarity=1.033  Sum_probs=95.8

Q ss_pred             CCCCCccchhhhccCcHHHHHhcCCCCCc-cccccccccchhhhhHHHHHHHhhhhccccccccccCCcchHHHHHHHHH
Q 029289           72 KYDPCTEKHSVVYFNQPEVQKALHVIPAV-ALAKWETCRWHQQHALMIFFIFTALQWGVVNNNWLDSPRIVLDIYHELIH  150 (196)
Q Consensus        72 ~~~~c~~~~~~~ylN~~~Vr~aLhv~~~~-~~~~w~~c~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~s~~~~~~~LL~  150 (196)
                      +++||.+.+++.|||+++||+||||+... +..+|+.||..                  |...+.|.+++++|++++||+
T Consensus         1 ~~~~C~~~~~~~ylN~~~V~~AL~v~~~~~~~~~w~~cs~~------------------v~~~~~d~~~s~~~~~~~Ll~   62 (153)
T 1whs_B            1 SYDPCTERYSTAYYNRRDVQMALHANVTGAMNYTWATCSDT------------------INTHWHDAPRSMLPIYRELIA   62 (153)
T ss_dssp             CCCTTHHHHHHHHHHCHHHHHHTTCSTTSCCCSCCCSBCHH------------------HHHSCCCCCSBCHHHHHHHHH
T ss_pred             CCCCchhhhHHHHcCCHHHHHHhCCCCCCCCCCCcccCchH------------------HHHhhhhccccHHHHHHHHHh
Confidence            36799988899999999999999998641 11379999988                  655677888899999999999


Q ss_pred             cCCeEEEeecCcccccchhhHHHHHHHcCCCCcccccccccCCcCC
Q 029289          151 SGLRIWMFSGDTDAVIPVTSARYSIDALNLPTVKPWRAWYDEGQVG  196 (196)
Q Consensus       151 ~girvLiYsGd~D~icn~~Gt~~~i~~L~w~~~~~~~~W~~~gqva  196 (196)
                      +|+||||||||+|++||++||++|+++|+|++.++|+||++++|+|
T Consensus        63 ~girvlIy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~~va  108 (153)
T 1whs_B           63 AGLRIWVFSGDTDAVVPLTATRYSIGALGLPTTTSWYPWYDDQEVG  108 (153)
T ss_dssp             TTCEEEEEEETTCSSSCHHHHHHHHHTTTCCEEEEEEEEEETTEEE
T ss_pred             cCceEEEEecCcCcccccHhHHHHHHhCCCCCcccccceeECCCcc
Confidence            9999999999999999999999999999999999999999988875

>1gxs_B P-(S)-hydroxymandelonitrIle lyase chain B; inhibitor complex, cyanogenesis mechanism; HET: NAG FUL DKA; 2.3A {Sorghum bicolor} SCOP: c.69.1.5

Probab=99.97  E-value=2.7e-32  Score=208.56  Aligned_cols=107  Identities=43%  Similarity=0.853  Sum_probs=96.2

Q ss_pred             CCCCCccchhhhccCcHHHHHhcCCCCCc-cccccccccchhhhhHHHHHHHhhhhccccccccccCCcchHHHHHHHHH
Q 029289           72 KYDPCTEKHSVVYFNQPEVQKALHVIPAV-ALAKWETCRWHQQHALMIFFIFTALQWGVVNNNWLDSPRIVLDIYHELIH  150 (196)
Q Consensus        72 ~~~~c~~~~~~~ylN~~~Vr~aLhv~~~~-~~~~w~~c~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~s~~~~~~~LL~  150 (196)
                      +++||.+.++..|||+++||+||||+... ++.+|+.||..                  |..+|.|.+++++|++++||+
T Consensus         3 ~~~~C~~~~~~~ylN~~~V~~ALhv~~~~~~~~~w~~Cs~~------------------V~~~~~d~~~~~~~~~~~Ll~   64 (158)
T 1gxs_B            3 PYDPCAVFNSINYLNLPEVQTALHANVSGIVEYPWTVCSNT------------------IFDQWGQAADDLLPVYRELIQ   64 (158)
T ss_dssp             CCCTTTHHHHHHHHTCHHHHHHHTCSGGGCSCSCCCSBCHH------------------HHHTCCCCCSBCHHHHHHHHH
T ss_pred             CCCCcccchHHHHcCCHHHHHHhCCCCCCCcCCCceeCCHH------------------HHhhhhhccccHHHHHHHHHH
Confidence            67899998899999999999999998641 11269999988                  655677888999999999999


Q ss_pred             cCCeEEEeecCcccccchhhHHHHHHHcCCCCcccccccccC---CcCC
Q 029289          151 SGLRIWMFSGDTDAVIPVTSARYSIDALNLPTVKPWRAWYDE---GQVG  196 (196)
Q Consensus       151 ~girvLiYsGd~D~icn~~Gt~~~i~~L~w~~~~~~~~W~~~---gqva  196 (196)
                      +|+||||||||+|++||++||++||++|+|++.++|+||+++   +|+|
T Consensus        65 ~girVliysGd~D~i~~~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~~va  113 (158)
T 1gxs_B           65 AGLRVWVYSGDTDSVVPVSSTRRSLAALELPVKTSWYPWYMAPTEREVG  113 (158)
T ss_dssp             TTCEEEEEEETTCSSSCHHHHHHHHHTTCCCEEEEEEEEESSTTCCSEE
T ss_pred             cCCeEEEEecccCccCCcHHHHHHHHHCCCcccCCccceEECCCCCccc
Confidence            999999999999999999999999999999999999999988   7774

>4az3_B Lysosomal protective protein 20 kDa chain; hydrolase, drug discovery, carboxypeptidase, cardiovascular; HET: NAG S35; 2.04A {Homo sapiens} PDB: 4az0_B*

Probab=99.95  E-value=5.7e-29  Score=189.53  Aligned_cols=97  Identities=27%  Similarity=0.507  Sum_probs=83.8

Q ss_pred             CCccc-hhhhccCcHHHHHhcCCCCCccccccccccchhhhhHHHHHHHhhhhccccccccccCCcchH-HHHHHHHHcC
Q 029289           75 PCTEK-HSVVYFNQPEVQKALHVIPAVALAKWETCRWHQQHALMIFFIFTALQWGVVNNNWLDSPRIVL-DIYHELIHSG  152 (196)
Q Consensus        75 ~c~~~-~~~~ylN~~~Vr~aLhv~~~~~~~~w~~c~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~s~~-~~~~~LL~~g  152 (196)
                      ||.+. .++.|||+++||+||||+..  ..+|+.||..                  |+..|.+...++. .+++.|+++|
T Consensus         4 PC~d~~~~~~ylN~~~V~~AL~v~~~--~~~w~~c~~~------------------v~~~~~~~~~~~~~~~~~~Ll~~g   63 (155)
T 4az3_B            4 PCTNTTAASTYLNNPYVRKALNIPEQ--LPQWDMCNFL------------------VNLQYRRLYRSMNSQYLKLLSSQK   63 (155)
T ss_dssp             TTCCCHHHHHHHTSHHHHHHTTCCTT--SCCCCSBCHH------------------HHHHCBCCCSBCHHHHHHHHHTCC
T ss_pred             CccCchHHHHHhCCHHHHHHcCCCCC--CCCceeCCch------------------hccccccccccchHHHHHHHHHcC
Confidence            79874 68999999999999999875  2479999988                  6556766555554 4677888899


Q ss_pred             CeEEEeecCcccccchhhHHHHHHHcCCCCccccccccc
Q 029289          153 LRIWMFSGDTDAVIPVTSARYSIDALNLPTVKPWRAWYD  191 (196)
Q Consensus       153 irvLiYsGd~D~icn~~Gt~~~i~~L~w~~~~~~~~W~~  191 (196)
                      +|||||+||.|++||++||++|+++|+|+++.+|+||+.
T Consensus        64 irVliy~Gd~D~icn~~G~~~~i~~L~w~~~~~~~~w~~  102 (155)
T 4az3_B           64 YQILLYNGDVDMACNFMGDEWFVDSLNQKMEVQRRPWLV  102 (155)
T ss_dssp             CEEEEEEETTCSSSCHHHHHHHHHHTCCSSCCCCEEEEE
T ss_pred             ceEEEEecccCcccCcHhHHHHHHhccccccccccccee
Confidence            999999999999999999999999999999999999975

>4az3_A Lysosomal protective protein 32 kDa chain; hydrolase, drug discovery, carboxypeptidase, cardiovascular; HET: NAG S35; 2.04A {Homo sapiens} PDB: 4az0_A*

Probab=99.47  E-value=2e-14  Score=119.54  Aligned_cols=98  Identities=15%  Similarity=0.269  Sum_probs=54.6

Q ss_pred             CeeecCcCCccccchhHHHHHHHhcCCCHHHHHHHhccCCcc------ccccccchhhhHHhHHHhh--hhhcccCCCC-
Q 029289            1 MQVGNALTDDYHDYLGLFQFWWSAGLISDDTYKQLKLLCDYE------SFIHPSCTASVSQSNRLLK--RMHVVGHASE-   71 (196)
Q Consensus         1 i~IGNg~~dp~~q~~~~~~~a~~~glI~~~~~~~~~~~C~~~------~~~~~~C~~~~~~~~~~~~--~~~~~~~~~~-   71 (196)
                      |+||||++||..|..++++|+|+||||++++++.+++.|...      ...+..|..+...+...+.  .++.|++... 
T Consensus       176 ~~iGNg~~d~~~~~~~~~~fa~~~gli~~~~~~~~~~~c~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~N~YdI~~~C  255 (300)
T 4az3_A          176 LAVGNGLSSYEQNDNSLVYFAYYHGLLGNRLWSSLQTHCCSQNKCNFYDNKDLECVTNLQEVARIVGNSGLNIYNLYAPC  255 (300)
T ss_dssp             EEEESCCSBHHHHHHHHHHHHHHTTSSCHHHHHHHHHHTEETTEECCSSCCCHHHHHHHHHHHHHHHSSSCCTTCTTSCC
T ss_pred             ceecCCccCHHHhcchhHHHHhhcCcCCHHHHHHHHHHHHHhhccCcCCCCcHHHHHHHHHHHHHhccCCCChhhccCcC
Confidence            589999999999999999999999999999999999988532      2344678877766655543  3566654321 


Q ss_pred             ----------CCCCCccchhhhccCcHHHHHhcCCCC
Q 029289           72 ----------KYDPCTEKHSVVYFNQPEVQKALHVIP   98 (196)
Q Consensus        72 ----------~~~~c~~~~~~~ylN~~~Vr~aLhv~~   98 (196)
                                ..+||...++..|+|+++||+|||+..
T Consensus       256 ~~~~~~~~~y~~~~~~~~~l~~y~nr~dV~~alha~~  292 (300)
T 4az3_A          256 AGGVPSHFRYEKDTVVVQDLGNIFTRLPLKRMWHQAL  292 (300)
T ss_dssp             TTCCC--------------------------------
T ss_pred             CCCCCccccccCChhHHHHHhCcCChHHHHHHhCcch
Confidence                      012444467788999999999999864

>1gxs_A P-(S)-hydroxymandelonitrIle lyase chain A; inhibitor complex, cyanogenesis mechanism; HET: NAG FUL DKA; 2.3A {Sorghum bicolor} SCOP: c.69.1.5

Probab=98.86  E-value=2e-09  Score=88.20  Aligned_cols=69  Identities=29%  Similarity=0.488  Sum_probs=57.2

Q ss_pred             CeeecCcCCccccchhHHHHHHHhcCCCHHHHHHHhccCCccc--cccccchhhhHHhHHHhhhhhcccCC
Q 029289            1 MQVGNALTDDYHDYLGLFQFWWSAGLISDDTYKQLKLLCDYES--FIHPSCTASVSQSNRLLKRMHVVGHA   69 (196)
Q Consensus         1 i~IGNg~~dp~~q~~~~~~~a~~~glI~~~~~~~~~~~C~~~~--~~~~~C~~~~~~~~~~~~~~~~~~~~   69 (196)
                      |+||||++||..|..++.+|+|+||||++++|+.+++.|.+..  ..+..|..+...+....+.++.|++.
T Consensus       184 i~ign~~~d~~~~~~~~~~~a~~~gli~~~~~~~~~~~C~~~~~~~~~~~C~~~~~~~~~~~~~in~YdI~  254 (270)
T 1gxs_A          184 LLVSSGLTNDHEDMIGMFESWWHHGLISDETRDSGLKVCPGTSFMHPTPECTEVWNKALAEQGNINPYTIY  254 (270)
T ss_dssp             EEEESCCCBHHHHHHHHHHHHHHTTCSCHHHHHHHHHHSTTCCSSSCCHHHHHHHHHHHHHTTTSCTTSTT
T ss_pred             EEEeCCccChhhhhhhHHHHHHhcCCCCHHHHHHHHHHhcccccCCchHHHHHHHHHHHHHhCCCChhhcC
Confidence            5899999999999999999999999999999999999998642  34467988877666666667766654

>1whs_A Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1bcs_A* 1bcr_A* 1wht_A* 3sc2_A*

Probab=98.77  E-value=2.5e-09  Score=86.98  Aligned_cols=69  Identities=41%  Similarity=0.834  Sum_probs=57.1

Q ss_pred             CeeecCcCCccccchhHHHHHHHhcCCCHHHHHHHhccCCccc--cccccchhhhHHhHHHhhhhhcccCC
Q 029289            1 MQVGNALTDDYHDYLGLFQFWWSAGLISDDTYKQLKLLCDYES--FIHPSCTASVSQSNRLLKRMHVVGHA   69 (196)
Q Consensus         1 i~IGNg~~dp~~q~~~~~~~a~~~glI~~~~~~~~~~~C~~~~--~~~~~C~~~~~~~~~~~~~~~~~~~~   69 (196)
                      |+||||++||..|..++.+|+|+||||++++|+.+++.|.+..  ..+..|..+...+....+.++.|++.
T Consensus       179 i~ign~~~d~~~~~~~~~~~a~~~gli~~~~~~~~~~~C~~~~~~~~~~~C~~~~~~~~~~~~~in~YdI~  249 (255)
T 1whs_A          179 FMVGNGLIDDYHDYVGTFEFWWNHGIVSDDTYRRLKEACLHDSFIHPSPACDAATDVATAEQGNIDMYSLY  249 (255)
T ss_dssp             EEEEEECCBHHHHHHHHHHHHHTTTCSCHHHHHHHHHHHTTSCSSSCCHHHHHHHHHHHHHHCSSCTTSTT
T ss_pred             EEecCCccCHHHhhhhHHHHHHHcCCCCHHHHHHHHHhccccccCCchHHHHHHHHHHHHHhCCCChhhcC
Confidence            5899999999999999999999999999999999999997642  34567988877666666666766543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	196
g1wht.1	409	c.69.1.5 (A:,B:) Serine carboxypeptidase II {Wheat	6e-32
g1gxs.1	425	c.69.1.5 (A:,B:) Hydroxynitrile lyase {Sorghum (So	7e-29
d1ac5a_	483	c.69.1.5 (A:) Serine carboxypeptidase II {Baker's	7e-19
d1ivya_	452	c.69.1.5 (A:) Human 'protective protein', HPP {Hum	7e-17
d1wpxa1	421	c.69.1.5 (A:1-421) Serine carboxypeptidase II {Bak	4e-14

>d1ac5a_ c.69.1.5 (A:) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]} Length = 483

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Serine carboxypeptidase-like
domain: Serine carboxypeptidase II
species: Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]

 Score = 81.4 bits (200), Expect = 7e-19
 Identities = 33/234 (14%), Positives = 60/234 (25%), Gaps = 57/234 (24%)

Query: 1   MQVGNALTDDYHDYLGLFQFWWSAGLISDDTYKQLKLLCDYESFIH-------------- 46
           + +GN   D     L    F     LI +       L   +E+  +              
Sbjct: 208 LLIGNGWIDPNTQSLSYLPFAMEKKLIDESNPNFKHLTNAHENCQNLINSASTDEAAHFS 267

Query: 47  -----------------PSCTASVSQSNRLLKRMHVVGHASEKYDPCTEKHSVVYFNQPE 89
                             S   +    N     +     +     P        +F+ P 
Sbjct: 268 YQECENILNLLLSYTRESSQKGTADCLNMYNFNLKDSYPSCGMNWPKDISFVSKFFSTPG 327

Query: 90  VQKALHVIPAVALAKWETCRWHQQHALMIFFIFTALQWGVVNNNWL-DSPRIVLDIYHEL 148
           V  +LH+     +  W+ C                     V         +  + +   L
Sbjct: 328 VIDSLHLDS-DKIDHWKECT------------------NSVGTKLSNPISKPSIHLLPGL 368

Query: 149 IHSGLRIWMFSGDTDAVIPVTSARYSIDALNLPTVK------PWRAWYDEGQVG 196
           + SG+ I +F+GD D +        +ID L    +K          W  + +  
Sbjct: 369 LESGIEIVLFNGDKDLICNNKGVLDTIDNLKWGGIKGFSDDAVSFDWIHKSKST 422

>d1ivya_ c.69.1.5 (A:) Human 'protective protein', HPP {Human (Homo sapiens) [TaxId: 9606]} Length = 452

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Serine carboxypeptidase-like
domain: Human 'protective protein', HPP
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.6 bits (185), Expect = 7e-17
 Identities = 40/246 (16%), Positives = 78/246 (31%), Gaps = 76/246 (30%)

Query: 1   MQVGNALTDDYHDYLGLFQFWWSAGLISDDTYKQLKLLCDYESFIH------PSCTASVS 54
           + VGN L+    +   L  F +  GL+ +  +  L+  C  ++  +        C  ++ 
Sbjct: 174 LAVGNGLSSYEQNDNSLVYFAYYHGLLGNRLWSSLQTHCCSQNKCNFYDNKDLECVTNLQ 233

Query: 55  QSNRLL------------------------------------------------KRMHVV 66
           +  R++                                                + +   
Sbjct: 234 EVARIVGNSGLNIYNLYAPCAGGVPSHFRYEKDTVVVQDLGNIFTRLPLKRMWHQALLRS 293

Query: 67  GHASEKYDPCTE-KHSVVYFNQPEVQKALHVIPAVALAKWETCRWHQQHALMIFFIFTAL 125
           G       PCT    +  Y N P V+KAL++   +   +W+ C +               
Sbjct: 294 GDKVRMDPPCTNTTAASTYLNNPYVRKALNIPEQLP--QWDMCNF--------------- 336

Query: 126 QWGVVNNNWLDSPRIVLDIYHELIHS-GLRIWMFSGDTDAVIPVTSARYSIDALNLPTVK 184
              +VN  +    R +   Y +L+ S   +I +++GD D         + +D+LN     
Sbjct: 337 ---LVNLQYRRLYRSMNSQYLKLLSSQKYQILLYNGDVDMACNFMGDEWFVDSLNQKMEV 393

Query: 185 PWRAWY 190
             R W 
Sbjct: 394 QRRPWL 399

>d1wpxa1 c.69.1.5 (A:1-421) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 421

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Serine carboxypeptidase-like
domain: Serine carboxypeptidase II
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 67.5 bits (164), Expect = 4e-14
 Identities = 36/230 (15%), Positives = 72/230 (31%), Gaps = 57/230 (24%)

Query: 1   MQVGNALTDDYHDYLGLFQF----WWSAGLISDDTYKQLKLLCDYESFIHPSC------- 49
           + +GN LTD    Y               ++  +    ++   +    +  SC       
Sbjct: 172 VLIGNGLTDPLTQYNYYEPMACGEGGEPSVLPSEECSAMEDSLERCLGLIESCYDSQSVW 231

Query: 50  ----------TASVSQSNRLLKRMHVVGHASEKYDPC--TEKHSVVYFNQPEVQKALHVI 97
                      A ++   R  + ++ +    E  + C  T +    Y NQ  V++A+   
Sbjct: 232 SCVPATIYCNNAQLAPYQRTGRNVYDIRKDCEGGNLCYPTLQDIDDYLNQDYVKEAVGA- 290

Query: 98  PAVALAKWETCRWHQQHALMIFFIFTALQWGVVNNNWL---DSPRIVLDIYHELIHSGLR 154
               +  +E+C                     +N N+L   D  +       +L++  L 
Sbjct: 291 ---EVDHYESC------------------NFDINRNFLFAGDWMKPYHTAVTDLLNQDLP 329

Query: 155 IWMFSGDTDAVIPVTSARYSIDALNLP--------TVKPWRAWYDEGQVG 196
           I +++GD D +      +   D L            V+ W A     +V 
Sbjct: 330 ILVYAGDKDFICNWLGNKAWTDVLPWKYDEEFASQKVRNWTASIT-DEVA 378

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	196
g1wht.1	409	Serine carboxypeptidase II {Wheat (Triticum vulgar	99.97
g1gxs.1	425	Hydroxynitrile lyase {Sorghum (Sorghum bicolor) [T	99.97
d1ivya_	452	Human 'protective protein', HPP {Human (Homo sapie	99.95
d1ac5a_	483	Serine carboxypeptidase II {Baker's yeast (Sacchar	99.95
d1wpxa1	421	Serine carboxypeptidase II {Baker's yeast (Sacchar	99.95

>d1ivya_ c.69.1.5 (A:) Human 'protective protein', HPP {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Serine carboxypeptidase-like
domain: Human 'protective protein', HPP
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=3.3e-29  Score=216.49  Aligned_cols=171  Identities=22%  Similarity=0.413  Sum_probs=128.2

Q ss_pred             CeeecCcCCccccchhHHHHHHHhcCCCHHHHHHHhccCCc------cccccccchhhhHHhHHHhhh--hhcccC----
Q 029289            1 MQVGNALTDDYHDYLGLFQFWWSAGLISDDTYKQLKLLCDY------ESFIHPSCTASVSQSNRLLKR--MHVVGH----   68 (196)
Q Consensus         1 i~IGNg~~dp~~q~~~~~~~a~~~glI~~~~~~~~~~~C~~------~~~~~~~C~~~~~~~~~~~~~--~~~~~~----   68 (196)
                      |+||||++|+..|..++.+|+|.||||+++.++.+++.|..      .......|......+.+....  ++.++.    
T Consensus       174 i~igng~~d~~~~~~~~~~~~~~~gli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~  253 (452)
T d1ivya_         174 LAVGNGLSSYEQNDNSLVYFAYYHGLLGNRLWSSLQTHCCSQNKCNFYDNKDLECVTNLQEVARIVGNSGLNIYNLYAPC  253 (452)
T ss_dssp             EEEESCCSBHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHEETTEECCSSCCCHHHHHHHHHHHHHHHSSSCCTTCTTSCC
T ss_pred             eEcCCCccCchhcchhHHHHHHhcccccchHHHHHHHHHhhhhhhhhccccCHHHHHHHHHHHHHhccCCCChhhhcccc
Confidence            58999999999999999999999999999999999886642      223445676655444333211  111100    


Q ss_pred             ------------------C----------C--------------CCCCCCcc-chhhhccCcHHHHHhcCCCCCcccccc
Q 029289           69 ------------------A----------S--------------EKYDPCTE-KHSVVYFNQPEVQKALHVIPAVALAKW  105 (196)
Q Consensus        69 ------------------~----------~--------------~~~~~c~~-~~~~~ylN~~~Vr~aLhv~~~~~~~~w  105 (196)
                                        .          .              ....+|.. ..+..|||+|+||+||||+.+  ...|
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yln~~~V~~aL~v~~~--~~~~  331 (452)
T d1ivya_         254 AGGVPSHFRYEKDTVVVQDLGNIFTRLPLKRMWHQALLRSGDKVRMDPPCTNTTAASTYLNNPYVRKALNIPEQ--LPQW  331 (452)
T ss_dssp             TTCCSSSEEEETTEEEECCCSCSSTTSCCCCCCGGGHHHHTCEEEECCTTCCCHHHHHHHTSHHHHHHTTCCTT--SCCC
T ss_pred             ccCCcchhhhhhcchhhhhhhhhhcccccccccchhccccCccccCCCCCccchHHHHHhcCHHHHHhcCCCCc--cccc
Confidence                              0          0              00013333 467899999999999999975  2469


Q ss_pred             ccccchhhhhHHHHHHHhhhhccccccccccCCcchHH-HHHHHHHcCCeEEEeecCcccccchhhHHHHHHHcCCCCcc
Q 029289          106 ETCRWHQQHALMIFFIFTALQWGVVNNNWLDSPRIVLD-IYHELIHSGLRIWMFSGDTDAVIPVTSARYSIDALNLPTVK  184 (196)
Q Consensus       106 ~~c~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~s~~~-~~~~LL~~girvLiYsGd~D~icn~~Gt~~~i~~L~w~~~~  184 (196)
                      ..|+..                  +...+.+..+++.+ +++.|+++|+|||||+||+|++||+.|||+|+++|+|+++.
T Consensus       332 ~~~~~~------------------v~~~~~~~~~~~~~~~~~~L~~~~~rVliy~Gd~D~~~~~~gte~~i~~l~~~~~~  393 (452)
T d1ivya_         332 DMCNFL------------------VNLQYRRLYRSMNSQYLKLLSSQKYQILLYNGDVDMACNFMGDEWFVDSLNQKMEV  393 (452)
T ss_dssp             CSBCHH------------------HHHHCBCCCSBSHHHHHHHHHHTCCEEEEEEETTCSSSCHHHHHHHHHHTCCCEEE
T ss_pred             ccccch------------------hhhhhhcccccchHHHHHHHHhCCCEEEEEeCCcceeCCCHHHHHHHHhcCCcccc
Confidence            999977                  55556666666665 45556688999999999999999999999999999999999


Q ss_pred             ccccccc
Q 029289          185 PWRAWYD  191 (196)
Q Consensus       185 ~~~~W~~  191 (196)
                      +|+||+.
T Consensus       394 ~~~~~~~  400 (452)
T d1ivya_         394 QRRPWLV  400 (452)
T ss_dssp             EEEEEEE
T ss_pred             cccccee
Confidence            9999975

>d1ac5a_ c.69.1.5 (A:) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Serine carboxypeptidase-like
domain: Serine carboxypeptidase II
species: Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]

Probab=99.95  E-value=7.6e-29  Score=217.11  Aligned_cols=167  Identities=20%  Similarity=0.366  Sum_probs=115.6

Q ss_pred             CeeecCcCCccccchhHHHHHHHhcCCCHHHHH--HH---hccCCc-------cc---cccccchhhhHHhHHHhhh---
Q 029289            1 MQVGNALTDDYHDYLGLFQFWWSAGLISDDTYK--QL---KLLCDY-------ES---FIHPSCTASVSQSNRLLKR---   62 (196)
Q Consensus         1 i~IGNg~~dp~~q~~~~~~~a~~~glI~~~~~~--~~---~~~C~~-------~~---~~~~~C~~~~~~~~~~~~~---   62 (196)
                      |+||||++||..|..++.+|+|+||+|++..++  .+   ...|..       ..   .....|......+......   
T Consensus       208 i~IGNg~~d~~~q~~sy~~~~~~~gli~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (483)
T d1ac5a_         208 LLIGNGWIDPNTQSLSYLPFAMEKKLIDESNPNFKHLTNAHENCQNLINSASTDEAAHFSYQECENILNLLLSYTRESSQ  287 (483)
T ss_dssp             EEEEEECCCHHHHHTTHHHHHHHTTSCCTTSTTHHHHHHHHHHHHHHHHHCCSGGGGSSSCHHHHTHHHHHHHHTCCCCT
T ss_pred             eeecCCccChhhhhhhHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHhhccchhhhhhHHHHHHHHHHHhhhccchhh
Confidence            589999999999999999999999999975432  21   122321       00   0112233222211111100   


Q ss_pred             ------hhcccCC-CCCC------CCCccchhhhccCcHHHHHhcCCCCCccccccccccchhhhhHHHHHHHhhhhccc
Q 029289           63 ------MHVVGHA-SEKY------DPCTEKHSVVYFNQPEVQKALHVIPAVALAKWETCRWHQQHALMIFFIFTALQWGV  129 (196)
Q Consensus        63 ------~~~~~~~-~~~~------~~c~~~~~~~ylN~~~Vr~aLhv~~~~~~~~w~~c~~~~~~~~~~~~~~~~~~~~~  129 (196)
                            ++.++.. ...+      .|+....+..|||+++||+||||+... ...|+.|+..                  
T Consensus       288 ~~~~~~~n~y~~~~~~~~~~~~~~~p~~~~~~~~yln~~~V~~ALhv~~~~-~~~w~~cs~~------------------  348 (483)
T d1ac5a_         288 KGTADCLNMYNFNLKDSYPSCGMNWPKDISFVSKFFSTPGVIDSLHLDSDK-IDHWKECTNS------------------  348 (483)
T ss_dssp             TSTTSEEETTEEEEEECTTTTTTTCCTHHHHHHHHHTSTTHHHHTTCCTTT-CCCCCSBCHH------------------
T ss_pred             ccccccccccccccCCCCcccccCCccchhHHHHHhcChhhhhhhhcCCCC-ccccccCChH------------------
Confidence                  1111110 1111      123335688999999999999998653 2469999988                  


Q ss_pred             ccccc-ccCCcchHHHHHHHHHcCCeEEEeecCcccccchhhHHHHHHHcCCCCcccc
Q 029289          130 VNNNW-LDSPRIVLDIYHELIHSGLRIWMFSGDTDAVIPVTSARYSIDALNLPTVKPW  186 (196)
Q Consensus       130 v~~~~-~d~~~s~~~~~~~LL~~girvLiYsGd~D~icn~~Gt~~~i~~L~w~~~~~~  186 (196)
                      |...+ .|.++++++.++.||++|+|||||+||+|++||+.||++|+++|+|++.+.|
T Consensus       349 v~~~~~~d~~~~~~~~l~~LL~~girVLIy~Gd~D~icn~~Gte~~i~~L~w~g~~~f  406 (483)
T d1ac5a_         349 VGTKLSNPISKPSIHLLPGLLESGIEIVLFNGDKDLICNNKGVLDTIDNLKWGGIKGF  406 (483)
T ss_dssp             HHHHCCCSSCCCGGGGHHHHHHTTCEEEEEEETTCSTTCHHHHHHHHHHCEETTEESS
T ss_pred             HHHHhcCCccccHHHHHHHHHHCCCEEEEEECChhhcCCCHHHHHHHHhCCCcccccc
Confidence            54444 4667889999999999999999999999999999999999999999987765

>d1wpxa1 c.69.1.5 (A:1-421) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Serine carboxypeptidase-like
domain: Serine carboxypeptidase II
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.95  E-value=1.4e-28  Score=211.76  Aligned_cols=174  Identities=20%  Similarity=0.265  Sum_probs=123.3

Q ss_pred             CeeecCcCCccccchhHHHHHHHhc----CCCHHHHHHHhccCCcc----c-----cccccchhhhHHhHHHh------h
Q 029289            1 MQVGNALTDDYHDYLGLFQFWWSAG----LISDDTYKQLKLLCDYE----S-----FIHPSCTASVSQSNRLL------K   61 (196)
Q Consensus         1 i~IGNg~~dp~~q~~~~~~~a~~~g----lI~~~~~~~~~~~C~~~----~-----~~~~~C~~~~~~~~~~~------~   61 (196)
                      |+||||++||..|+.++.+|++.||    ++++++++.+.+.|...    .     .....|..+........      .
T Consensus       172 i~iGng~~dp~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (421)
T d1wpxa1         172 VLIGNGLTDPLTQYNYYEPMACGEGGEPSVLPSEECSAMEDSLERCLGLIESCYDSQSVWSCVPATIYCNNAQLAPYQRT  251 (421)
T ss_dssp             EEEESCCCCHHHHGGGHHHHHTTCSSSCCCSCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTHHHHHT
T ss_pred             eEecCCcccchhhhhhHHHHHhhcccccccCCHHHHHHHHHHHHHHHHHHHhhccchhhhhhhhhhhhhcccccchhhhc
Confidence            5899999999999999999999998    88898888777654210    0     00112221111111000      0


Q ss_pred             hhhcccCC--CCCCCCCcc--chhhhccCcHHHHHhcCCCCCccccccccccchhhhhHHHHHHHhhhhcccccccc---
Q 029289           62 RMHVVGHA--SEKYDPCTE--KHSVVYFNQPEVQKALHVIPAVALAKWETCRWHQQHALMIFFIFTALQWGVVNNNW---  134 (196)
Q Consensus        62 ~~~~~~~~--~~~~~~c~~--~~~~~ylN~~~Vr~aLhv~~~~~~~~w~~c~~~~~~~~~~~~~~~~~~~~~v~~~~---  134 (196)
                      ..+.++..  ....++|..  ..+..|||+++||+||||+..    +|..|+..                  +..++   
T Consensus       252 ~~~~~d~~~~~~~~~~~~~~~~~~~~ylN~~~Vq~aL~v~~~----~~~~cs~~------------------v~~~~~~~  309 (421)
T d1wpxa1         252 GRNVYDIRKDCEGGNLCYPTLQDIDDYLNQDYVKEAVGAEVD----HYESCNFD------------------INRNFLFA  309 (421)
T ss_dssp             TBCSSCTTSBCCSSTTSCTTHHHHHHHHTSHHHHHHHTCCSS----SCCSBCHH------------------HHHHHHTT
T ss_pred             CcccccccccccCCCcCCCcHhhhhhhhccHHHHHHhCCCCC----cceecCch------------------Hhhhhhcc
Confidence            11112211  111223432  457899999999999999864    79999987                  43332   


Q ss_pred             ccCCcchHHHHHHHHHcCCeEEEeecCcccccchhhHHHHHHHcCCCCcccc-----ccccc--CCcCC
Q 029289          135 LDSPRIVLDIYHELIHSGLRIWMFSGDTDAVIPVTSARYSIDALNLPTVKPW-----RAWYD--EGQVG  196 (196)
Q Consensus       135 ~d~~~s~~~~~~~LL~~girvLiYsGd~D~icn~~Gt~~~i~~L~w~~~~~~-----~~W~~--~gqva  196 (196)
                      .|.+.++.+.+++||++|+||||||||+|++||+.||++||++|+|++...|     ++|+.  ++|+|
T Consensus       310 ~d~~~~~~~~l~~LL~~~irVLIysGd~D~~~p~~Gte~~i~~L~w~~~~~f~~~~~~~w~~~~~~~~a  378 (421)
T d1wpxa1         310 GDWMKPYHTAVTDLLNQDLPILVYAGDKDFICNWLGNKAWTDVLPWKYDEEFASQKVRNWTASITDEVA  378 (421)
T ss_dssp             TCTTCCTTHHHHHHHHTTCCEEEEEETTCSTTCHHHHHHHHHHCCSTTHHHHHHSCCEEEECTTTCSEE
T ss_pred             CcccCcHHHHHHHHHhcCCeEEEEeCCcCccCCchhHHHHHHhCCCCcccchhcCcccceeecCCCeEE
Confidence            4677889999999999999999999999999999999999999999998754     78864  45553