Citrus Sinensis ID: 029298

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-----
Protein Sequence
MKPQLQSLCKIIVLFIITTNTLLVTSQPETHRLSPDNDNATIYRVSKQLCWGCIGEALQFLFDHNLVRAMKWELPLMWDYDLEKYARWWANQRKADCKLQHSFPEDNFKLGENIFWGSGSTWTPRDAVSVWAGEEKYYTYATNTCQEGQQCGHYTQIVWKNTRRIGCARVVCDSGDVFMTCNYDPVGNYVGERPY
Secondary Structure (PSIPRED)
cccHHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHccccccccHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHccccccccccccccccccccccccccccccHHHHHHHHHcccccccccccccccccccccccccEEccccEEEEEEEEcccccEEEEEEccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccHEEEEEEcccccccccccccccccccccccccccHcHcHHccccccccHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHcccccEcccccccccccccEEccccccccHHHHHHHHHHHHccccccccccccccEEEEEEEEEEEccEEEEEEEEEEccccEEEEEEccccccccccccc
Coil and Loop (DISEMBL)
MKPQLQSLCKIIVLFIITTntllvtsqpethrlspdndnatIYRVSKQLCWGCIGEALQFLFDHNLVRAMKWelplmwdyDLEKYARWWANQRKadcklqhsfpednfklgenifwgsgstwtprdavsvwageEKYYTYATntcqegqqcghyTQIVWKNtrrigcarvvcdsgdvfmtcnydpvgnyvgerpy
Flexible Loop (DISEMBL)
MKPQLQSLCKIIVLFIITTNTLLVTsqpethrlspdndnATIYRVSKQLCWGCIGEALQFLFDHNLVRAMKWELPLMWDYDLEKYARWWANQRKADCKLQHSFPEDNFKLGENIFWGSGSTWTPRDAVSVWAGEEKYYTYAtntcqegqqCGHYTQIVWKNTRRIGCARVVCdsgdvfmtcnydpvgnyvgerpy
Low Complexity Region (SEG)
MKPQLQSLCKIIVLFIITTNTLLVTSQPETHRLSPDNDNATIYRVSKQLCWGCIGEALQFLFDHNLVRAMKWELPLMWDYDLEKYARWWANQRKADCKLQHSFPEDNFKLGENIFWGSGSTWTPRDAVSVWAGEEKYYTYATNTCQEGQQCGHYTQIVWKNTRRIGCARVVCDSGDVFMTCNYDPVGNYVGERPY
Disordered region (IsUnstruct)
******SLCKIIVLFIITTNTLLVTS************NATIYRVSKQLCWGCIGEALQFLFDHNLVRAMKWELPLMWDYDLEKYARWWANQRKADCKLQHSFPEDNFKLGENIFWGSGSTWTPRDAVSVWAGEEKYYTYATNTCQEGQQCGHYTQIVWKNTRRIGCARVVCDSGDVFMTCNYDPVGNYV*****
Disordered Region (DISOPRED)
******S*CKIIVLFIITTNT*********************************GEALQFLFDHNLVRAMKWELPLMWDYDLEKYARWWANQRKADCKLQHSFPEDNFKLGENIFWGSGSTWTPRDAVSVWAGEEKYYTYATNTCQEGQQCGHYTQIVWKNTRRIGCARVVCDSGDVFMTCNYDPVGNYVGERPY
Disordered Region (DISEMBL)
MKPQLQSLCKIIVLFIITTNTLLVTSQPETHRLSPDNDNATIYRVSKQLCWGCIGEALQFLFDHNLVRAMKWELPLMWDYDLEKYARWWANQRKADCKLQHSFPEDNFKLGENIFWGSGSTWTPRDAVSVWAGEEKYYTYATNTCQEGQQCGHYTQIVWKNTRRIGCARVVCDSGDVFMTCNYDPVGNYVGERPY
Disordered Region (DISPRO)
*KPQLQSLCKIIVLFIITTNTLLVTSQPETHRLSPDNDNATIYRVSKQLCWGCIGEALQFLFDHNLVRAMKWELPLMWDYDLEKYARWWANQRKADCKLQHSFPEDNFKLGENIFWGSGSTWTPRDAVSVWAGEEKYYTYATNTCQEGQQCGHYTQIVWKNTRRIGCARVVCDSGDVFMTCNYDPVGNYVGER**
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MKPQLQSLCKIIVLFIITTNTLLVTSQPETHRLSPDNDNATIYRVSKQLCWGCIGEALQFLFDHNLVRAMKWELPLMWDYDLEKYARWWANQRKADCKLQHSFPEDNFKLGENIFWGSGSTWTPRDAVSVWAGEEKYYTYATNTCQEGQQCGHYTQIVWKNTRRIGCARVVCDSGDVFMTCNYDPVGNYVGERPY
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	195	2.2.26 [Sep-21-2011]
Q40374	173	Pathogenesis-related prot	N/A	no	0.682	0.768	0.557	1e-39
P09042	168	Pathogenesis-related prot	N/A	no	0.676	0.785	0.477	2e-33
P35792	164	Pathogenesis-related prot	N/A	no	0.676	0.804	0.492	1e-32
Q05968	164	Pathogenesis-related prot	N/A	no	0.676	0.804	0.485	2e-32
P08299	168	Pathogenesis-related prot	N/A	no	0.676	0.785	0.485	3e-32
P35793	164	Pathogenesis-related prot	N/A	no	0.676	0.804	0.5	1e-31
P07053	168	Pathogenesis-related prot	N/A	no	0.676	0.785	0.463	1e-31
Q41359	167	Pathogenesis-related prot	N/A	no	0.682	0.796	0.470	2e-31
Q00008	167	Pathogenesis-related prot	N/A	no	0.676	0.790	0.492	2e-31
Q04108	159	Pathogenesis-related leaf	N/A	no	0.661	0.811	0.470	4e-30

>sp|Q40374|PR1_MEDTR Pathogenesis-related protein PR-1 OS=Medicago truncatula GN=PR-1 PE=2 SV=1

 Score =  162 bits (410), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 77/138 (55%), Positives = 93/138 (67%), Gaps = 5/138 (3%)

Query: 59  QFLFDHNLVRAMKWELPLMWDYDLEKYARWWANQRKADCKLQHSFPEDNFKLGENIFWGS 118
           QFL   N+ RA     PL+WD  L  YA+W+ANQR+ DC L+HS    N   GENIFWGS
Sbjct: 40  QFLIPQNIARAAVGLRPLVWDDKLTHYAQWYANQRRNDCALEHS----NGPYGENIFWGS 95

Query: 119 GSTWTPRDAVSVWAGEEKYYTYATNTCQEGQQCGHYTQIVWKNTRRIGCARVVC-DSGDV 177
           G  W P  AVS W  E+++Y Y  N+C +G+ CGHYTQ+VW +T ++GCA VVC D    
Sbjct: 96  GVGWNPAQAVSAWVDEKQFYNYWHNSCVDGEMCGHYTQVVWGSTTKVGCASVVCSDDKGT 155

Query: 178 FMTCNYDPVGNYVGERPY 195
           FMTCNYDP GNY GERPY
Sbjct: 156 FMTCNYDPPGNYYGERPY 173

Probably involved in the defense reaction of plants against pathogens.
Medicago truncatula (taxid: 3880)

>sp|P09042|PR1C_TOBAC Pathogenesis-related protein 1C OS=Nicotiana tabacum PE=2 SV=3

 Score =  141 bits (356), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 65/136 (47%), Positives = 88/136 (64%), Gaps = 4/136 (2%)

Query: 60  FLFDHNLVRAMKWELPLMWDYDLEKYARWWANQRKADCKLQHSFPEDNFKLGENIFWGSG 119
           +L  HN  RA     PL WD  +  YA+ +A+Q  ADC L HS  +     GEN+ WGSG
Sbjct: 37  YLDAHNTARADVGVEPLTWDDQVAAYAQNYASQLAADCNLVHSHGQ----YGENLAWGSG 92

Query: 120 STWTPRDAVSVWAGEEKYYTYATNTCQEGQQCGHYTQIVWKNTRRIGCARVVCDSGDVFM 179
              T   AV +W  E++YY + +NTC +GQ CGHYTQ+VW+N+ R+GCARV C++G   +
Sbjct: 93  DFLTAAKAVEMWVNEKQYYAHDSNTCAQGQVCGHYTQVVWRNSVRVGCARVQCNNGGYIV 152

Query: 180 TCNYDPVGNYVGERPY 195
           +CNYDP GN +G+ PY
Sbjct: 153 SCNYDPPGNVIGKSPY 168

Probably involved in the defense reaction of plants against pathogens.

Nicotiana tabacum (taxid: 4097)

>sp|P35792|PR12_HORVU Pathogenesis-related protein PRB1-2 OS=Hordeum vulgare PE=2 SV=1

 Score =  139 bits (349), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 68/138 (49%), Positives = 90/138 (65%), Gaps = 6/138 (4%)

Query: 60  FLFDHNLVRAMKWELPLMWDYDLEKYARWWANQRKADCKLQHSFPEDNFKLGENIFWGS- 118
           ++  HN  R+      + W   L+ +A+ +ANQR  DCKLQHS        GENIFWGS 
Sbjct: 31  YVSPHNAARSAVGVGAVSWSTKLQAFAQNYANQRINDCKLQHS----GGPYGENIFWGSA 86

Query: 119 GSTWTPRDAVSVWAGEEKYYTYATNTCQEGQQCGHYTQIVWKNTRRIGCARVVCDSG-DV 177
           G+ W   DAV+ W  E+K Y Y +NTC  G+ CGHYTQ+VW+ +  IGCARVVC++   V
Sbjct: 87  GADWKAADAVNSWVNEKKDYNYGSNTCAAGKVCGHYTQVVWRASTSIGCARVVCNNNRGV 146

Query: 178 FMTCNYDPVGNYVGERPY 195
           F+TCNY+P GN VG++PY
Sbjct: 147 FITCNYEPRGNIVGQKPY 164

Probably involved in the defense reaction of plants against pathogens.

Hordeum vulgare (taxid: 4513)

>sp|Q05968|PR1_HORVU Pathogenesis-related protein 1 OS=Hordeum vulgare PE=2 SV=1

 Score =  138 bits (348), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 67/138 (48%), Positives = 90/138 (65%), Gaps = 6/138 (4%)

Query: 60  FLFDHNLVRAMKWELPLMWDYDLEKYARWWANQRKADCKLQHSFPEDNFKLGENIFWGS- 118
           ++  HN  R+      + W   L+ +A+ +ANQR  DCKLQHS        GENIFWGS 
Sbjct: 31  YVSPHNAARSAVGVGAVSWSTKLQAFAQNYANQRINDCKLQHS----GGPYGENIFWGSA 86

Query: 119 GSTWTPRDAVSVWAGEEKYYTYATNTCQEGQQCGHYTQIVWKNTRRIGCARVVCDSG-DV 177
           G+ W   DAV+ W  E+K Y Y +NTC  G+ CGHYTQ+VW+ +  IGCARVVC++   V
Sbjct: 87  GADWKASDAVNSWVSEKKDYDYGSNTCAAGKVCGHYTQVVWRASTSIGCARVVCNNNRGV 146

Query: 178 FMTCNYDPVGNYVGERPY 195
           F+TCNY+P GN +G++PY
Sbjct: 147 FITCNYEPRGNIIGQKPY 164

Probably involved in the defense reaction of plants against pathogens.

Hordeum vulgare (taxid: 4513)

>sp|P08299|PR1A_TOBAC Pathogenesis-related protein 1A OS=Nicotiana tabacum PE=1 SV=1

 Score =  138 bits (347), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 66/136 (48%), Positives = 87/136 (63%), Gaps = 4/136 (2%)

Query: 60  FLFDHNLVRAMKWELPLMWDYDLEKYARWWANQRKADCKLQHSFPEDNFKLGENIFWGSG 119
           +L  HN  RA     PL WD  +  YA+ +A+Q  ADC L HS  +     GEN+  GSG
Sbjct: 37  YLDAHNTARADVGVEPLTWDDQVAAYAQNYASQLAADCNLVHSHGQ----YGENLAEGSG 92

Query: 120 STWTPRDAVSVWAGEEKYYTYATNTCQEGQQCGHYTQIVWKNTRRIGCARVVCDSGDVFM 179
              T   AV +W  E++YY + +NTC +GQ CGHYTQ+VW+N+ R+GCARV C++G   +
Sbjct: 93  DFMTAAKAVEMWVDEKQYYDHDSNTCAQGQVCGHYTQVVWRNSVRVGCARVQCNNGGYVV 152

Query: 180 TCNYDPVGNYVGERPY 195
           +CNYDP GNY GE PY
Sbjct: 153 SCNYDPPGNYRGESPY 168

Probably involved in the defense reaction of plants against pathogens.

Nicotiana tabacum (taxid: 4097)

>sp|P35793|PR13_HORVU Pathogenesis-related protein PRB1-3 OS=Hordeum vulgare PE=2 SV=1

 Score =  135 bits (341), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 69/138 (50%), Positives = 90/138 (65%), Gaps = 6/138 (4%)

Query: 60  FLFDHNLVRAMKWELPLMWDYDLEKYARWWANQRKADCKLQHSFPEDNFKLGENIFWGS- 118
           ++  HN  RA      + W   L+ +A+ +ANQR  DCKLQHS        GENIFWGS 
Sbjct: 31  YVSPHNAARAAVGVGAVSWSTKLQAFAQNYANQRINDCKLQHS----GGPYGENIFWGSA 86

Query: 119 GSTWTPRDAVSVWAGEEKYYTYATNTCQEGQQCGHYTQIVWKNTRRIGCARVVCDSG-DV 177
           G+ W   DAV+ W  E+K Y Y +NTC  G+ CGHYTQ+VW+ +  IGCARVVC++   V
Sbjct: 87  GADWKASDAVNSWVSEKKDYDYGSNTCAAGKVCGHYTQVVWRASTSIGCARVVCNNNRGV 146

Query: 178 FMTCNYDPVGNYVGERPY 195
           F+TCNY+P GN VG++PY
Sbjct: 147 FITCNYEPRGNIVGQKPY 164

Probably involved in the defense reaction of plants against pathogens.

Hordeum vulgare (taxid: 4513)

>sp|P07053|PR1B_TOBAC Pathogenesis-related protein 1B OS=Nicotiana tabacum PE=2 SV=1

 Score =  135 bits (341), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 63/136 (46%), Positives = 86/136 (63%), Gaps = 4/136 (2%)

Query: 60  FLFDHNLVRAMKWELPLMWDYDLEKYARWWANQRKADCKLQHSFPEDNFKLGENIFWGSG 119
           +L  HN  RA     PL WD  +  YA+ + +Q  ADC L HS  +     GEN+  GSG
Sbjct: 37  YLDAHNTARADVGVEPLTWDNGVAAYAQNYVSQLAADCNLVHSHGQ----YGENLAQGSG 92

Query: 120 STWTPRDAVSVWAGEEKYYTYATNTCQEGQQCGHYTQIVWKNTRRIGCARVVCDSGDVFM 179
              T   AV +W  E++YY + +NTC +GQ CGHYTQ+VW+N+ R+GCARV C++G   +
Sbjct: 93  DFMTAAKAVEMWVDEKQYYDHDSNTCAQGQVCGHYTQVVWRNSVRVGCARVKCNNGGYVV 152

Query: 180 TCNYDPVGNYVGERPY 195
           +CNYDP GN +G+ PY
Sbjct: 153 SCNYDPPGNVIGQSPY 168

Probably involved in the defense reaction of plants against pathogens.

Nicotiana tabacum (taxid: 4097)

>sp|Q41359|PR1_SAMNI Pathogenesis-related protein PR-1 type OS=Sambucus nigra PE=2 SV=1

 Score =  135 bits (339), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 64/136 (47%), Positives = 86/136 (63%), Gaps = 3/136 (2%)

Query: 60  FLFDHNLVRAMKWELPLMWDYDLEKYARWWANQRKADCKLQHSFPEDNFKLGENIFWGSG 119
           ++  HN  R+     P+ WD  +  +AR +A  R  DC+L HS    + + GEN+ +GSG
Sbjct: 35  YVDAHNAARSAVNVGPVTWDESVAAFARQYAQSRAGDCRLVHS---GDPRYGENLAFGSG 91

Query: 120 STWTPRDAVSVWAGEEKYYTYATNTCQEGQQCGHYTQIVWKNTRRIGCARVVCDSGDVFM 179
              T R+AV +W  E   Y   TNTC  G+ CGHYTQ+VW+N+ RIGCARV C++G  F+
Sbjct: 92  FELTGRNAVDMWVAERNDYNPNTNTCAPGKVCGHYTQVVWRNSVRIGCARVRCNNGAWFI 151

Query: 180 TCNYDPVGNYVGERPY 195
           TCNY P GNY G+RPY
Sbjct: 152 TCNYSPPGNYAGQRPY 167

Probably involved in the defense reaction of plants against pathogens.

Sambucus nigra (taxid: 4202)

>sp|Q00008|PRMS_MAIZE Pathogenesis-related protein PRMS OS=Zea mays GN=PRMS PE=2 SV=1

 Score =  135 bits (339), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 68/138 (49%), Positives = 86/138 (62%), Gaps = 6/138 (4%)

Query: 60  FLFDHNLVRAMKWELPLMWDYDLEKYARWWANQRKADCKLQHSFPEDNFKLGENIFWGS- 118
           +L   N  RA     P+ W   L+++A  +A QR  DC+LQHS        GENIFWGS 
Sbjct: 34  YLTPQNSARAAVGVGPVTWSTKLQQFAEKYAAQRAGDCRLQHS----GGPYGENIFWGSA 89

Query: 119 GSTWTPRDAVSVWAGEEKYYTYATNTCQEGQQCGHYTQIVWKNTRRIGCARVVC-DSGDV 177
           G  W   DAV  W  E+++Y YATN+C  G+ CGHYTQ+VW+ T  IGCARVVC D+  V
Sbjct: 90  GFDWKAVDAVRSWVDEKQWYNYATNSCAAGKVCGHYTQVVWRATTSIGCARVVCRDNRGV 149

Query: 178 FMTCNYDPVGNYVGERPY 195
           F+ CNY+P GN  G +PY
Sbjct: 150 FIICNYEPRGNIAGMKPY 167

Probably involved in the defense reaction of plants against pathogens.

Zea mays (taxid: 4577)

>sp|Q04108|PR04_SOLLC Pathogenesis-related leaf protein 4 OS=Solanum lycopersicum PE=2 SV=1

 Score =  130 bits (328), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 64/136 (47%), Positives = 82/136 (60%), Gaps = 7/136 (5%)

Query: 60  FLFDHNLVRAMKWELPLMWDYDLEKYARWWANQRKADCKLQHSFPEDNFKLGENIFWGSG 119
           +L  HN  RA     P+ WD +L   A+ +AN R  DC L HS   +N   G       G
Sbjct: 31  YLAVHNDARAQVGVGPMSWDANLASRAQNYANSRAGDCNLIHSGAGENLAKG-------G 83

Query: 120 STWTPRDAVSVWAGEEKYYTYATNTCQEGQQCGHYTQIVWKNTRRIGCARVVCDSGDVFM 179
             +T R AV +W  E   Y YATN C  G+ CGHYTQ+VW+N+ R+GC R  C++G  F+
Sbjct: 84  GDFTGRAAVQLWVSERPDYNYATNQCVGGKMCGHYTQVVWRNSVRLGCGRARCNNGWWFI 143

Query: 180 TCNYDPVGNYVGERPY 195
           +CNYDPVGN+VGERPY
Sbjct: 144 SCNYDPVGNWVGERPY 159

Probably involved in the defense reaction of plants against pathogens.

Solanum lycopersicum (taxid: 4081)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	195
224143787	195	predicted protein [Populus trichocarpa]	0.989	0.989	0.756	3e-82
255583297	198	STS14 protein precursor, putative [Ricin	1.0	0.984	0.732	5e-81
388503388	194	unknown [Lotus japonicus]	0.907	0.912	0.761	2e-79
225446158	193	PREDICTED: pathogenesis-related protein	0.969	0.979	0.693	4e-78
357479771	206	Cysteine-rich secretory protein LCCL dom	0.984	0.932	0.665	6e-76
449528152	200	PREDICTED: pathogenesis-related protein	1.0	0.975	0.665	9e-75
449457125	200	PREDICTED: pathogenesis-related protein	0.810	0.79	0.791	2e-74
389620136	211	pathogenesis related protein 1 isoform 2	0.810	0.748	0.778	3e-72
297803544	190	hypothetical protein ARALYDRAFT_492242 [	0.938	0.963	0.535	5e-58
15235992	190	putative pathogenesis-related protein [A	0.938	0.963	0.530	2e-57

>gi|224143787|ref|XP_002325075.1| predicted protein [Populus trichocarpa] gi|222866509|gb|EEF03640.1| predicted protein [Populus trichocarpa]

 Score =  310 bits (793), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 149/197 (75%), Positives = 160/197 (81%), Gaps = 4/197 (2%)

Query: 1   MKPQLQSLCKIIVLFIITTNTLLVTSQPETHRLSP--DNDNATIYRVSKQLCWGCIGEAL 58
           M+ QL      I   I+TTN +LVTSQ  +   +P    DN TIY+VSKQLCWGC+GE+L
Sbjct: 1   MRAQL--FFVFIHFTILTTNIILVTSQSSSLAETPLKKVDNETIYKVSKQLCWGCLGESL 58

Query: 59  QFLFDHNLVRAMKWELPLMWDYDLEKYARWWANQRKADCKLQHSFPEDNFKLGENIFWGS 118
           QFLF HNLVRA KWELPLMWD+ LEKYA WWA  RKADCKLQHSFPE +FKLGENI+WGS
Sbjct: 59  QFLFAHNLVRAAKWELPLMWDFQLEKYAGWWAGLRKADCKLQHSFPEYDFKLGENIYWGS 118

Query: 119 GSTWTPRDAVSVWAGEEKYYTYATNTCQEGQQCGHYTQIVWKNTRRIGCARVVCDSGDVF 178
           GSTWTP DAV  WAGEEKYY YA NTCQEGQ CGHYTQIVWK TRRIGCARVVCD GDVF
Sbjct: 119 GSTWTPTDAVGTWAGEEKYYNYAQNTCQEGQMCGHYTQIVWKTTRRIGCARVVCDDGDVF 178

Query: 179 MTCNYDPVGNYVGERPY 195
           MTCNYDP GNYVGERPY
Sbjct: 179 MTCNYDPPGNYVGERPY 195

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255583297|ref|XP_002532412.1| STS14 protein precursor, putative [Ricinus communis] gi|223527886|gb|EEF29976.1| STS14 protein precursor, putative [Ricinus communis]

 Score =  305 bits (782), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 145/198 (73%), Positives = 161/198 (81%), Gaps = 3/198 (1%)

Query: 1   MKPQLQSLCKIIVLFIITTNTLLVTSQ-PETHRLSPDN--DNATIYRVSKQLCWGCIGEA 57
           MKP    L  I ++ I  TN LLVTSQ P     +P N  +N TIY+VSKQLCWGCIGEA
Sbjct: 1   MKPHSFLLLFIFLITIFITNNLLVTSQSPSPPAETPLNKRNNDTIYKVSKQLCWGCIGEA 60

Query: 58  LQFLFDHNLVRAMKWELPLMWDYDLEKYARWWANQRKADCKLQHSFPEDNFKLGENIFWG 117
           LQFL+ HNLVRA KWELPL WD  LE+YARWWA  RK DC+L+HSFPE +FKLGENI+WG
Sbjct: 61  LQFLYAHNLVRASKWELPLTWDSQLERYARWWAGTRKQDCQLEHSFPEGDFKLGENIYWG 120

Query: 118 SGSTWTPRDAVSVWAGEEKYYTYATNTCQEGQQCGHYTQIVWKNTRRIGCARVVCDSGDV 177
           SG+ WTPRDAVS WA EEKYYTYATN+C+EGQ CGHYTQIVWK TRRIGCARVVCD GDV
Sbjct: 121 SGTAWTPRDAVSAWASEEKYYTYATNSCEEGQMCGHYTQIVWKTTRRIGCARVVCDDGDV 180

Query: 178 FMTCNYDPVGNYVGERPY 195
           FMTCNYDP GNY+GE+PY
Sbjct: 181 FMTCNYDPPGNYIGEKPY 198

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388503388|gb|AFK39760.1| unknown [Lotus japonicus]

 Score =  300 bits (767), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 137/180 (76%), Positives = 154/180 (85%), Gaps = 3/180 (1%)

Query: 19  TNTLLVTSQPETH-RLSPDN--DNATIYRVSKQLCWGCIGEALQFLFDHNLVRAMKWELP 75
            N    +S P+TH +L+P    DN TIY+VSKQLCWGCIGE+L+FLF HN+VRA KWE P
Sbjct: 15  ANPQSASSVPQTHNQLTPKKIPDNETIYKVSKQLCWGCIGESLEFLFRHNMVRAAKWESP 74

Query: 76  LMWDYDLEKYARWWANQRKADCKLQHSFPEDNFKLGENIFWGSGSTWTPRDAVSVWAGEE 135
           LMWD+ L+ YARWWA QRK DCK++HSFPE++FKLGENIFWGSGS WTP DAV  WA EE
Sbjct: 75  LMWDFQLQSYARWWAGQRKPDCKVEHSFPENDFKLGENIFWGSGSAWTPTDAVKAWADEE 134

Query: 136 KYYTYATNTCQEGQQCGHYTQIVWKNTRRIGCARVVCDSGDVFMTCNYDPVGNYVGERPY 195
           KYYTYATNTC+EGQ CGHYTQIVWKNT+R+GCARVVCD GDVFMTCNYDPVGNYVGERPY
Sbjct: 135 KYYTYATNTCEEGQMCGHYTQIVWKNTKRVGCARVVCDDGDVFMTCNYDPVGNYVGERPY 194

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225446158|ref|XP_002276867.1| PREDICTED: pathogenesis-related protein PR-1 [Vitis vinifera] gi|147828178|emb|CAN72926.1| hypothetical protein VITISV_033689 [Vitis vinifera]

 Score =  296 bits (757), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 138/199 (69%), Positives = 159/199 (79%), Gaps = 10/199 (5%)

Query: 1   MKPQLQSLCKIIVLFIITTNTLLVTSQ----PETHRLSPDNDNATIYRVSKQLCWGCIGE 56
           MKP       I++L +      LV+SQ    PET R  PDN+  TIYRVSKQLCWGC+ +
Sbjct: 1   MKPYFH----ILLLILFCNTPFLVSSQSFPEPETRRKVPDNE--TIYRVSKQLCWGCMAQ 54

Query: 57  ALQFLFDHNLVRAMKWELPLMWDYDLEKYARWWANQRKADCKLQHSFPEDNFKLGENIFW 116
           +L+FLF HNLVRA KWELP  WD++LE YA+WWA QR+ DCK++HSFPED FKLGENI+W
Sbjct: 55  SLEFLFAHNLVRAAKWELPFTWDFNLENYAKWWAGQRRRDCKVEHSFPEDGFKLGENIYW 114

Query: 117 GSGSTWTPRDAVSVWAGEEKYYTYATNTCQEGQQCGHYTQIVWKNTRRIGCARVVCDSGD 176
           G+G TWTP DAV  WA EEKYY YATNTC+ G+ CGHYTQIVW+NTRRIGCARVVCDSGD
Sbjct: 115 GNGDTWTPTDAVRAWADEEKYYRYATNTCEVGEICGHYTQIVWRNTRRIGCARVVCDSGD 174

Query: 177 VFMTCNYDPVGNYVGERPY 195
           VFMTCNYDPVGNY+GERPY
Sbjct: 175 VFMTCNYDPVGNYIGERPY 193

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357479771|ref|XP_003610171.1| Cysteine-rich secretory protein LCCL domain-containing [Medicago truncatula] gi|355511226|gb|AES92368.1| Cysteine-rich secretory protein LCCL domain-containing [Medicago truncatula] gi|388512321|gb|AFK44222.1| unknown [Medicago truncatula]

 Score =  288 bits (738), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 139/209 (66%), Positives = 157/209 (75%), Gaps = 17/209 (8%)

Query: 1   MKPQLQSLCKIIVLFIITTNTLL--------------VTSQPETHRLSPDNDNATIYRVS 46
           MK  L  LC   +    TT TL               + +Q  + +  PDN+  +IY+VS
Sbjct: 1   MKSHLLLLC-FFIFVTFTTKTLSTSPQPSSSSSSPTQIYNQYLSQQKKPDNE--SIYKVS 57

Query: 47  KQLCWGCIGEALQFLFDHNLVRAMKWELPLMWDYDLEKYARWWANQRKADCKLQHSFPED 106
           KQLCW C+ E+L+FLF HNLVRA KWELPLMWDY LE+YARWWA+QRK DCK++HSFPED
Sbjct: 58  KQLCWNCMQESLEFLFRHNLVRASKWELPLMWDYQLEQYARWWASQRKPDCKVEHSFPED 117

Query: 107 NFKLGENIFWGSGSTWTPRDAVSVWAGEEKYYTYATNTCQEGQQCGHYTQIVWKNTRRIG 166
            FKLGENI+WGSGS WTP DAV  WA EEKYYTY TN+C  GQ CGHYTQIVWK+TRRIG
Sbjct: 118 GFKLGENIYWGSGSDWTPTDAVKAWADEEKYYTYVTNSCVSGQMCGHYTQIVWKSTRRIG 177

Query: 167 CARVVCDSGDVFMTCNYDPVGNYVGERPY 195
           CARVVCD GDVFMTCNYDPVGNYVGERPY
Sbjct: 178 CARVVCDDGDVFMTCNYDPVGNYVGERPY 206

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449528152|ref|XP_004171070.1| PREDICTED: pathogenesis-related protein PR-1-like [Cucumis sativus]

 Score =  285 bits (728), Expect = 9e-75,   Method: Compositional matrix adjust.
 Identities = 133/200 (66%), Positives = 157/200 (78%), Gaps = 5/200 (2%)

Query: 1   MKPQLQSLCKIIVLFI----ITTNTLLVTSQPETHRLSPDN-DNATIYRVSKQLCWGCIG 55
           M  QLQ    +++L +    + ++    T   +  R   +  DN TIYRVSKQLCWGCI 
Sbjct: 1   MNKQLQLPVFLVLLTVFMPRVLSHNFSQTPGVQVQRNKQNQVDNETIYRVSKQLCWGCIS 60

Query: 56  EALQFLFDHNLVRAMKWELPLMWDYDLEKYARWWANQRKADCKLQHSFPEDNFKLGENIF 115
           E+++FLF HNLVRA K+ELPL W++ LEKYARWWA QRK DCKLQHSFPED+FKLGENIF
Sbjct: 61  ESIEFLFAHNLVRAAKFELPLAWNFQLEKYARWWAGQRKGDCKLQHSFPEDDFKLGENIF 120

Query: 116 WGSGSTWTPRDAVSVWAGEEKYYTYATNTCQEGQQCGHYTQIVWKNTRRIGCARVVCDSG 175
           WGSGS W P DAV+ WA E KYYTYATN+C+ GQ CGHYTQIVW+NT+R+GCARVVCD+G
Sbjct: 121 WGSGSAWRPLDAVTSWASEVKYYTYATNSCEVGQMCGHYTQIVWRNTQRMGCARVVCDNG 180

Query: 176 DVFMTCNYDPVGNYVGERPY 195
           D+FMTCNYDP GNYVGERPY
Sbjct: 181 DIFMTCNYDPPGNYVGERPY 200

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449457125|ref|XP_004146299.1| PREDICTED: pathogenesis-related protein PR-1-like [Cucumis sativus]

 Score =  283 bits (725), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 125/158 (79%), Positives = 141/158 (89%)

Query: 38  DNATIYRVSKQLCWGCIGEALQFLFDHNLVRAMKWELPLMWDYDLEKYARWWANQRKADC 97
           DN TIYRVSKQLCWGCI E+++FLF HNLVRA K+ELPL W++ LEKYARWWA QRK DC
Sbjct: 43  DNETIYRVSKQLCWGCISESIEFLFAHNLVRAAKFELPLAWNFQLEKYARWWAGQRKGDC 102

Query: 98  KLQHSFPEDNFKLGENIFWGSGSTWTPRDAVSVWAGEEKYYTYATNTCQEGQQCGHYTQI 157
           KLQHSFPED+FKLGENIFWGSGS W P DAV+ WA E KYYTYATN+C+ GQ CGHYTQI
Sbjct: 103 KLQHSFPEDDFKLGENIFWGSGSAWRPLDAVTSWASEVKYYTYATNSCEAGQMCGHYTQI 162

Query: 158 VWKNTRRIGCARVVCDSGDVFMTCNYDPVGNYVGERPY 195
           VW+NT+R+GCARVVCD+GD+FMTCNYDP GNY+GERPY
Sbjct: 163 VWRNTQRMGCARVVCDNGDIFMTCNYDPPGNYLGERPY 200

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|389620136|gb|AFK93501.1| pathogenesis related protein 1 isoform 2 [Ficus pumila var. awkeotsang]

 Score =  276 bits (707), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 123/158 (77%), Positives = 135/158 (85%)

Query: 38  DNATIYRVSKQLCWGCIGEALQFLFDHNLVRAMKWELPLMWDYDLEKYARWWANQRKADC 97
           DN T+YRVSKQLCWGCIGE+L+FLF HN+VRA KWELPL WD+ L +YARWWA  RK DC
Sbjct: 54  DNETVYRVSKQLCWGCIGESLEFLFAHNMVRAYKWELPLAWDFQLAQYARWWAGIRKLDC 113

Query: 98  KLQHSFPEDNFKLGENIFWGSGSTWTPRDAVSVWAGEEKYYTYATNTCQEGQQCGHYTQI 157
           K QHSFPED+FKLGENI+WGSGSTWTP DAV  W  EEKYY YA NTC  GQ CGHYTQI
Sbjct: 114 KPQHSFPEDDFKLGENIYWGSGSTWTPIDAVKAWTDEEKYYNYAANTCAVGQMCGHYTQI 173

Query: 158 VWKNTRRIGCARVVCDSGDVFMTCNYDPVGNYVGERPY 195
           VW++T R+GCARVVCD GDVFMTCNYDP GNY+GERPY
Sbjct: 174 VWRSTTRVGCARVVCDDGDVFMTCNYDPKGNYIGERPY 211

Source: Ficus pumila var. awkeotsang

Species: Ficus pumila

Genus: Ficus

Family: Moraceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297803544|ref|XP_002869656.1| hypothetical protein ARALYDRAFT_492242 [Arabidopsis lyrata subsp. lyrata] gi|297315492|gb|EFH45915.1| hypothetical protein ARALYDRAFT_492242 [Arabidopsis lyrata subsp. lyrata]

 Score =  229 bits (584), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 98/183 (53%), Positives = 132/183 (72%)

Query: 13  VLFIITTNTLLVTSQPETHRLSPDNDNATIYRVSKQLCWGCIGEALQFLFDHNLVRAMKW 72
           V+ ++    ++V+       ++       ++R+ K LC GC  ++LQFLF HNLVRA ++
Sbjct: 8   VILLLGALNVVVSLSITKSLITKSATLGQVFRICKNLCPGCDHDSLQFLFRHNLVRAARF 67

Query: 73  ELPLMWDYDLEKYARWWANQRKADCKLQHSFPEDNFKLGENIFWGSGSTWTPRDAVSVWA 132
           E PL+WD  L+ YA+ WANQR+ DC L+HSF    F LGENI+WG G+ W+P DAV  WA
Sbjct: 68  EPPLIWDRRLQNYAQGWANQRRGDCALRHSFSNGEFNLGENIYWGYGANWSPADAVVAWA 127

Query: 133 GEEKYYTYATNTCQEGQQCGHYTQIVWKNTRRIGCARVVCDSGDVFMTCNYDPVGNYVGE 192
            E+++Y Y +NTC  GQ CGHYTQIVWKNTRR+GCARVVC++G +FMTCNYDP GNY+G+
Sbjct: 128 SEKRFYHYGSNTCDPGQMCGHYTQIVWKNTRRVGCARVVCNNGGIFMTCNYDPPGNYIGQ 187

Query: 193 RPY 195
           +PY
Sbjct: 188 KPY 190

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15235992|ref|NP_194308.1| putative pathogenesis-related protein [Arabidopsis thaliana] gi|4539296|emb|CAB39599.1| putative pathogenesis-related protein [Arabidopsis thaliana] gi|7269429|emb|CAB79433.1| putative pathogenesis-related protein [Arabidopsis thaliana] gi|26449893|dbj|BAC42068.1| putative pathogenesis-related protein [Arabidopsis thaliana] gi|332659713|gb|AEE85113.1| putative pathogenesis-related protein [Arabidopsis thaliana]

 Score =  227 bits (578), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 97/183 (53%), Positives = 131/183 (71%)

Query: 13  VLFIITTNTLLVTSQPETHRLSPDNDNATIYRVSKQLCWGCIGEALQFLFDHNLVRAMKW 72
           V+ ++    ++V+       ++       ++R+ K LC GC  ++LQFLF HNLVRA ++
Sbjct: 8   VILLLGALNVVVSLSITNSLITKSATLGQVFRICKNLCPGCDHDSLQFLFRHNLVRAARF 67

Query: 73  ELPLMWDYDLEKYARWWANQRKADCKLQHSFPEDNFKLGENIFWGSGSTWTPRDAVSVWA 132
           E PL+WD  L+ YA+ WANQR+ DC L+HS     F LGENI+WG G+ W+P DAV  WA
Sbjct: 68  EPPLIWDRRLQNYAQGWANQRRGDCALRHSVSNGEFNLGENIYWGYGANWSPADAVVAWA 127

Query: 133 GEEKYYTYATNTCQEGQQCGHYTQIVWKNTRRIGCARVVCDSGDVFMTCNYDPVGNYVGE 192
            E+++Y Y +NTC  GQ CGHYTQIVWK+TRR+GCARVVCD+G +FMTCNYDP GNY+G+
Sbjct: 128 SEKRFYHYGSNTCDAGQMCGHYTQIVWKSTRRVGCARVVCDNGGIFMTCNYDPPGNYIGQ 187

Query: 193 RPY 195
           +PY
Sbjct: 188 KPY 190

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	195
TAIR|locus:2117537	190	AT4G25780 "AT4G25780" [Arabido	0.789	0.810	0.616	2.8e-57
TAIR|locus:2117547	210	AT4G25790 "AT4G25790" [Arabido	0.682	0.633	0.579	7.5e-41
TAIR|locus:504954862	207	AT5G57625 "AT5G57625" [Arabido	0.794	0.748	0.506	5.3e-40
TAIR|locus:2118771	161	AT4G30320 "AT4G30320" [Arabido	0.723	0.875	0.510	1.8e-39
TAIR|locus:2035317	241	AT1G01310 "AT1G01310" [Arabido	0.682	0.551	0.525	5.5e-38
TAIR|locus:2125244	185	AT4G31470 "AT4G31470" [Arabido	0.928	0.978	0.450	5.5e-38
TAIR|locus:2091196	161	AT3G19690 "AT3G19690" [Arabido	0.764	0.925	0.474	4.6e-34
TAIR|locus:2134178	163	AT4G33720 "AT4G33720" [Arabido	0.671	0.803	0.522	4.6e-34
TAIR|locus:2180662	166	AT5G26130 "AT5G26130" [Arabido	0.682	0.801	0.470	2.3e-32
TAIR|locus:2075039	186	AT3G09590 "AT3G09590" [Arabido	0.682	0.715	0.467	3e-30

TAIR|locus:2117537 AT4G25780 "AT4G25780" [Arabidopsis thaliana (taxid:3702)]

 Score = 589 (212.4 bits), Expect = 2.8e-57, P = 2.8e-57
 Identities = 95/154 (61%), Positives = 121/154 (78%)

Query:    42 IYRVSKQLCWGCIGEALQFLFDHNLVRAMKWELPLMWDYDLEKYARWWANQRKADCKLQH 101
             ++R+ K LC GC  ++LQFLF HNLVRA ++E PL+WD  L+ YA+ WANQR+ DC L+H
Sbjct:    37 VFRICKNLCPGCDHDSLQFLFRHNLVRAARFEPPLIWDRRLQNYAQGWANQRRGDCALRH 96

Query:   102 SFPEDNFKLGENIFWGSGSTWTPRDAVSVWAGEEKYYTYATNTCQEGQQCGHYTQIVWKN 161
             S     F LGENI+WG G+ W+P DAV  WA E+++Y Y +NTC  GQ CGHYTQIVWK+
Sbjct:    97 SVSNGEFNLGENIYWGYGANWSPADAVVAWASEKRFYHYGSNTCDAGQMCGHYTQIVWKS 156

Query:   162 TRRIGCARVVCDSGDVFMTCNYDPVGNYVGERPY 195
             TRR+GCARVVCD+G +FMTCNYDP GNY+G++PY
Sbjct:   157 TRRVGCARVVCDNGGIFMTCNYDPPGNYIGQKPY 190

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IEA;ISS

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2117547 AT4G25790 "AT4G25790" [Arabidopsis thaliana (taxid:3702)]

 Score = 434 (157.8 bits), Expect = 7.5e-41, P = 7.5e-41
 Identities = 80/138 (57%), Positives = 93/138 (67%)

Query:    59 QFLFDHNLVRAMKWELPLMWDYDLEKYARWWANQRKADCKLQHSFPEDNFKLGENIFWGS 118
             QFL  HN VR      PL+WD  +  YA WWANQR+ DC L HS        GEN+FWGS
Sbjct:    77 QFLDPHNTVRGGLGLPPLVWDVKIASYATWWANQRRYDCSLTHS----TGPYGENLFWGS 132

Query:   119 GSTWTPRDAVSVWAGEEKYYTYATNTCQEGQQCGHYTQIVWKNTRRIGCARVVCDSG-DV 177
             GS +T   AV  W  E K Y + TNTC+    CGHYTQIVW+ TRR+GCARVVC++G  V
Sbjct:   133 GSDFTSTFAVESWTVEAKSYNHMTNTCEGDGMCGHYTQIVWRETRRLGCARVVCENGAGV 192

Query:   178 FMTCNYDPVGNYVGERPY 195
             F+TCNYDP GNYVGE+PY
Sbjct:   193 FITCNYDPPGNYVGEKPY 210

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IEA;ISS

GO:0008150 "biological_process" evidence=ND

GO:0010054 "trichoblast differentiation" evidence=RCA

TAIR|locus:504954862 AT5G57625 "AT5G57625" [Arabidopsis thaliana (taxid:3702)]

 Score = 426 (155.0 bits), Expect = 5.3e-40, P = 5.3e-40
 Identities = 83/164 (50%), Positives = 103/164 (62%)

Query:    35 PDNDNATIYR--VSKQLCWGCIGEALQFLFDHNLVRAMKWELPLMWDYDLEKYARWWANQ 92
             P      +YR   +  L  G I  A  FL  HN +R+     PL+WD  L  YA WWANQ
Sbjct:    50 PSPSPKPVYRPPTTPSLPAGSI--ARLFLDPHNALRSGLGLPPLIWDGKLASYATWWANQ 107

Query:    93 RKADCKLQHSFPEDNFKLGENIFWGSGSTWTPRDAVSVWAGEEKYYTYATNTCQEGQQCG 152
             R+ DC L HS        GEN+FWGSGS+W P  AV  W  E + Y + TN+C     CG
Sbjct:   108 RRYDCSLTHS----TGPYGENLFWGSGSSWAPGFAVQSWIVEGRSYNHNTNSCDGSGMCG 163

Query:   153 HYTQIVWKNTRRIGCARVVCDSG-DVFMTCNYDPVGNYVGERPY 195
             HYTQ+VW++T+R+GCARVVC++G  VF+TCNYDP GNYVGE+PY
Sbjct:   164 HYTQMVWRDTKRLGCARVVCENGAGVFITCNYDPPGNYVGEKPY 207

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IEA;ISS

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2118771 AT4G30320 "AT4G30320" [Arabidopsis thaliana (taxid:3702)]

 Score = 421 (153.3 bits), Expect = 1.8e-39, P = 1.8e-39
 Identities = 75/147 (51%), Positives = 93/147 (63%)

Query:    50 CWGCIGEALQFLFDHNLVRAMKWELPLMWDYDLEKYARWWANQRKADCKLQHSFPEDNFK 109
             C  C     QF+   N  RA     PL WD  L +YA+WWANQR+ DC L HS    N  
Sbjct:    20 CCHCATYQEQFMGPQNAARAHLRLKPLKWDAKLARYAQWWANQRRGDCALTHS----NGP 75

Query:   110 LGENIFWGSGSTWTPRDAVSVWAGEEKYYTYATNTCQEGQQCGHYTQIVWKNTRRIGCAR 169
              GEN+FWGSG+ W P  A   W  E + Y Y +N+C   + CGHYTQIVWKNT++IGCA 
Sbjct:    76 YGENLFWGSGNRWGPSQAAYGWLSEARSYNYRSNSCNS-EMCGHYTQIVWKNTQKIGCAH 134

Query:   170 VVCDSGD-VFMTCNYDPVGNYVGERPY 195
             V+C+ G  VF+TCNYDP GN++G +PY
Sbjct:   135 VICNGGGGVFLTCNYDPPGNFLGRKPY 161

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IEA;ISS

GO:0008150 "biological_process" evidence=ND

GO:0010054 "trichoblast differentiation" evidence=RCA

GO:0048765 "root hair cell differentiation" evidence=RCA

TAIR|locus:2035317 AT1G01310 "AT1G01310" [Arabidopsis thaliana (taxid:3702)]

 Score = 407 (148.3 bits), Expect = 5.5e-38, P = 5.5e-38
 Identities = 72/137 (52%), Positives = 89/137 (64%)

Query:    59 QFLFDHNLVRAMKWELPLMWDYDLEKYARWWANQRKADCKLQHSFPEDNFKLGENIFWGS 118
             +FL  HNLVRA   E P  WD  L  YAR WANQR  DC+L HS    N   GENIFW  
Sbjct:    87 EFLIAHNLVRARVGEPPFQWDGRLAAYARTWANQRVGDCRLVHS----NGPYGENIFWAG 142

Query:   119 GSTWTPRDAVSVWAGEEKYYTYATNTCQEGQQCGHYTQIVWKNTRRIGCARVVCDSGDVF 178
              + W+PRD V+VWA E+K+Y    NTC+    CGHYTQIVW+++ ++GCA V C +G V+
Sbjct:   143 KNNWSPRDIVNVWADEDKFYDVKGNTCEPQHMCGHYTQIVWRDSTKVGCASVDCSNGGVY 202

Query:   179 MTCNYDPVGNYVGERPY 195
               C Y+P GNY GE P+
Sbjct:   203 AICVYNPPGNYEGENPF 219

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IEA;ISS

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2125244 AT4G31470 "AT4G31470" [Arabidopsis thaliana (taxid:3702)]

 Score = 407 (148.3 bits), Expect = 5.5e-38, P = 5.5e-38
 Identities = 86/191 (45%), Positives = 113/191 (59%)

Query:     6 QSLCKIIVLFIITTNTLLVTSQPETHRLSPDNDNATIYRVSKQLCWGCIGEALQFLFDHN 65
             ++L  II++ +I+T    ++ Q  ++R +P   +  I+   K L    I +  QFL  HN
Sbjct:     4 KTLIFIIIIIVISTPLPSLSFQIPSNR-TPTT-STLIFSQDKALARNTIQQ--QFLRPHN 59

Query:    66 LVRAMKWELP-LMWDYDLEKYARWWANQRKADCKLQHSFPEDNFKLGENIFWGSGSTWTP 124
             ++RA K  LP L W   L  YA  WA  R+ DCKL HS        GEN+FWGSG  WTP
Sbjct:    60 ILRA-KLRLPPLKWSNSLALYASRWARTRRGDCKLIHS----GGPYGENLFWGSGKGWTP 114

Query:   125 RDAVSVWAGEEKYYTYATNTCQEGQQCGHYTQIVWKNTRRIGCARVVCDSGDVFMTCNYD 184
             RDAV+ WA E KYY   T+ C+    C HYTQ+VWK + RIGCA   C +GD F+ CNYD
Sbjct:   115 RDAVAAWASEMKYYDRRTSHCKANGDCLHYTQLVWKKSSRIGCAISFCKTGDTFIICNYD 174

Query:   185 PVGNYVGERPY 195
             P GN VG+ P+
Sbjct:   175 PPGNIVGQPPF 185

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IEA;ISS

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2091196 AT3G19690 "AT3G19690" [Arabidopsis thaliana (taxid:3702)]

 Score = 370 (135.3 bits), Expect = 4.6e-34, P = 4.6e-34
 Identities = 75/158 (47%), Positives = 99/158 (62%)

Query:    42 IYRVSKQLCWGCIGEALQ--FLFDHNLVRAMKWELPLMWDYDLEKYARWWANQRKADCKL 99
             ++ ++  L +G + E LQ  FL  HN  R      PL+WD ++  YA  +ANQR  DC L
Sbjct:     9 LFLLAIALFYGSLAEDLQQQFLEAHNEARNEVGLDPLVWDDEVAAYAASYANQRINDCAL 68

Query:   100 QHSFPEDNFKLGENIFWGSGSTWTPRDAVSVWAGEEKYYTYATNTCQE--GQQCGHYTQI 157
              HS    N   GENI   SG   +  DA  +W  E++YY Y +NTC +  G  C HYTQ+
Sbjct:    69 VHS----NGPFGENIAMSSGEM-SAEDAAEMWINEKQYYDYDSNTCNDPNGGTCLHYTQV 123

Query:   158 VWKNTRRIGCARVVCDSGDVFMTCNYDPVGNYVGERPY 195
             VWKNT R+GCA+VVC+SG  F+TCNYDP GNY+GE+P+
Sbjct:   124 VWKNTVRLGCAKVVCNSGGTFITCNYDPPGNYIGEKPF 161

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IEA;ISS

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2134178 AT4G33720 "AT4G33720" [Arabidopsis thaliana (taxid:3702)]

 Score = 370 (135.3 bits), Expect = 4.6e-34, P = 4.6e-34
 Identities = 71/136 (52%), Positives = 89/136 (65%)

Query:    60 FLFDHNLVRAMKWELPLMWDYDLEKYARWWANQRKADCKLQHSFPEDNFKLGENIFWGSG 119
             FL  HN  RA     PL WD  +  YAR +ANQRK DC ++HS    +   GENI W SG
Sbjct:    33 FLAVHNRARAEVGVGPLRWDEKVAAYARNYANQRKGDCAMKHS----SGSYGENIAWSSG 88

Query:   120 STWTPRDAVSVWAGEEKYYTYATNTCQEGQQCGHYTQIVWKNTRRIGCARVVCDSGDVFM 179
             S  T   AV +W  E+  Y Y +NTC   +QCGHYTQ+VW+N+ R+GCA+V C++G  F+
Sbjct:    89 SM-TGVAAVDMWVDEQFDYDYDSNTCAWDKQCGHYTQVVWRNSERLGCAKVRCNNGQTFI 147

Query:   180 TCNYDPVGNYVGERPY 195
             TCNYDP GN+VGE PY
Sbjct:   148 TCNYDPPGNWVGEWPY 163

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IEA;ISS

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2180662 AT5G26130 "AT5G26130" [Arabidopsis thaliana (taxid:3702)]

 Score = 354 (129.7 bits), Expect = 2.3e-32, P = 2.3e-32
 Identities = 64/136 (47%), Positives = 84/136 (61%)

Query:    60 FLFDHNLVRAMKWELPLMWDYDLEKYARWWANQRKADCKLQHSFPEDNFKLGENIFWGSG 119
             +L +HN  R      P+ W    E+YA  +A QRK DC L HS    N   GEN+ W SG
Sbjct:    34 YLDEHNRARTQVGVPPMKWHAGAEQYAWNYAQQRKGDCSLTHS--NSNGLYGENLAW-SG 90

Query:   120 STWTPRDAVSVWAGEEKYYTYATNTCQEGQQCGHYTQIVWKNTRRIGCARVVCDSGDVFM 179
                +  +AV +W  E+  Y YA+NTC +G+QCGHYTQ+VW+ +  +GCA+V CD+G  F+
Sbjct:    91 GALSGAEAVKLWVNEKSDYIYASNTCSDGKQCGHYTQVVWRTSEWVGCAKVKCDNGGTFV 150

Query:   180 TCNYDPVGNYVGERPY 195
             TCNY P GNY G  PY
Sbjct:   151 TCNYYPPGNYRGRWPY 166

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IEA;ISS

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2075039 AT3G09590 "AT3G09590" [Arabidopsis thaliana (taxid:3702)]

 Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
 Identities = 65/139 (46%), Positives = 80/139 (57%)

Query:    59 QFLFDHNLVRAMKWELPLMWDYDLEKYARWWANQRKADCKLQHSFPEDNFKLGENIFWGS 118
             +FL  HN  R       L WD DL ++A  WA QRK+DC + HS        GENIFW  
Sbjct:    52 EFLQAHNDARVSSGVPTLGWDRDLARFADKWAKQRKSDCSMIHS----GGPYGENIFWHR 107

Query:   119 GS-TWTPRDAVSVWAGEEKYYTYATNTCQEGQQCGHYTQIVWKNTRRIGCARVVCDSGDV 177
                TW+P   V+ W  E   Y   TNTC  G+ CGHYTQ+VW+ T  +GCARV C +G  
Sbjct:   108 RKKTWSPEKVVTRWFEERFNYDVKTNTCAPGKMCGHYTQMVWRETTAVGCARVKCHNGRG 167

Query:   178 FMT-CNYDPVGNYVGERPY 195
             ++  C YDP GNY GERP+
Sbjct:   168 YLVVCEYDPRGNYEGERPF 186

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IEA;ISS

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_Genewise1_v1.C_LG_XVIII2884 hypothetical protein (196 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	195
cd05381	136	cd05381, SCP_PR-1_like, SCP_PR-1_like: SCP-like ex	1e-72
smart00198	144	smart00198, SCP, SCP / Tpx-1 / Ag5 / PR-1 / Sc7 fa	8e-34
cd00168	122	cd00168, SCP, SCP: SCP-like extracellular protein	2e-31
cd05380	144	cd05380, SCP_euk, SCP_euk: SCP-like extracellular	3e-31
cd05382	132	cd05382, SCP_GAPR-1_like, SCP_GAPR-1_like: SCP-lik	6e-28
cd05384	129	cd05384, SCP_PRY1_like, SCP_PRY1_like: SCP-like ex	8e-26
cd05559	136	cd05559, SCP_HrTT-1, SCP_HrTT-1: SCP-like extracel	4e-25
cd05385	144	cd05385, SCP_GLIPR-1_like, SCP_GLIPR-1_like: SCP-l	2e-24
pfam00188	121	pfam00188, CAP, Cysteine-rich secretory protein fa	4e-20
cd05383	138	cd05383, SCP_CRISP, SCP_CRISP: SCP-like extracellu	1e-19
cd05379	122	cd05379, SCP_bacterial, SCP_bacterial: SCP-like ex	5e-04

>gnl|CDD|240181 cd05381, SCP_PR-1_like, SCP_PR-1_like: SCP-like extracellular protein domain, PR-1 like subfamily

 Score =  215 bits (549), Expect = 1e-72
 Identities = 77/140 (55%), Positives = 93/140 (66%), Gaps = 5/140 (3%)

Query: 57  ALQFLFDHNLVRAMKWELPLMWDYDLEKYARWWANQRKADCKLQHSFPEDNFKLGENIFW 116
              FL  HN  RA     PL WD  L  YA+ +ANQR+ DC L HS        GEN+FW
Sbjct: 1   PQDFLDAHNAARAAVGVPPLKWDDTLAAYAQRYANQRRGDCALVHSNGP----YGENLFW 56

Query: 117 GSGSTWTPRDAVSVWAGEEKYYTYATNTCQEGQQCGHYTQIVWKNTRRIGCARVVCDS-G 175
           GSG  W+  DAV+ W  E+KYY Y +NTC  G+ CGHYTQ+VW+NT R+GCARV CD+ G
Sbjct: 57  GSGGNWSAADAVASWVSEKKYYDYDSNTCAAGKMCGHYTQVVWRNTTRVGCARVTCDNGG 116

Query: 176 DVFMTCNYDPVGNYVGERPY 195
            VF+ CNYDP GNY+G+RPY
Sbjct: 117 GVFIICNYDPPGNYIGQRPY 136

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), which accumulates after infections with pathogens, and may act as an anti-fungal agent or be involved in cell wall loosening. It also includes CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. Length = 136

>gnl|CDD|214553 smart00198, SCP, SCP / Tpx-1 / Ag5 / PR-1 / Sc7 family of extracellular domains

 Score =  117 bits (294), Expect = 8e-34
 Identities = 46/120 (38%), Positives = 58/120 (48%), Gaps = 14/120 (11%)

Query: 74  LPLMWDYDLEKYARWWANQRKADCKLQHSFPEDNFKLGENIFWGSGS----TWTPRDAVS 129
           L L WD +L   A+ WANQ    C   HS P      GEN+ W S S          AV 
Sbjct: 31  LKLTWDCELASSAQNWANQ----CPFGHSTPRPG--YGENLAWWSSSTALPDTYASAAVQ 84

Query: 130 VWAGEEKYYTYATNTC-QEGQQCGHYTQIVWKNTRRIGCARVVCDSG---DVFMTCNYDP 185
           +W  E + Y Y++NTC     + GHYTQ+VW  T ++GC    C  G      + CNYDP
Sbjct: 85  LWYDEFQDYGYSSNTCKDTNGKIGHYTQVVWAKTYKVGCGVANCPDGTKKKTVVVCNYDP 144

Human glioma pathogenesis-related protein GliPR and the plant pathogenesis-related protein represent functional links between plant defense systems and human immune system. This family has no known function. Length = 144

>gnl|CDD|238097 cd00168, SCP, SCP: SCP-like extracellular protein domain, found in eukaryotes and prokaryotes

 Score =  110 bits (276), Expect = 2e-31
 Identities = 46/122 (37%), Positives = 60/122 (49%), Gaps = 8/122 (6%)

Query: 64  HNLVRA-MKWELPLMWDYDLEKYARWWANQRKADCKLQHSFPEDNFKLGENIFWGSGSTW 122
           HN  RA +   LP+ WD +L K A+ +AN     C  +HS  +    +GEN+  GS    
Sbjct: 8   HNSYRAKVNGMLPMSWDAELAKTAQNYAN----RCIFKHSGEDGRGFVGENLAAGSYD-M 62

Query: 123 TPRDAVSVWAGEEKYYTYATNTCQEGQQCGHYTQIVWKNTRRIGCARVVCDSGDVFMTCN 182
           T   AV  W  E K Y +           GHYTQ+VWKNT +IGC    C S   ++ CN
Sbjct: 63  TGPAAVQAWYNEIKNYNFGQPGF--SSGTGHYTQVVWKNTTKIGCGVAFCGSNSYYVVCN 120

Query: 183 YD 184
           Y 
Sbjct: 121 YG 122

This family includes plant pathogenesis-related protein 1 (PR-1), which accumulates after infections with pathogens, and may act as an anti-fungal agent or be involved in cell wall loosening. This family also includes CRISPs, mammalian cysteine-rich secretory proteins, which combine SCP with a C-terminal cysteine rich domain, and allergen 5 from vespid venom. Roles for CRISP, in response to pathogens, fertilization, and sperm maturation have been proposed. One member, Tex31 from the venom duct of Conus textile, has been shown to possess proteolytic activity sensitive to serine protease inhibitors. The human GAPR-1 protein has been reported to dimerize, and such a dimer may form an active site containing a catalytic triad. SCP has also been proposed to be a Ca++ chelating serine protease. The Ca++-chelating function would fit with various signaling processes that members of this family, such as the CRISPs, are involved in, and is supported by sequence and structural evidence of a conserved pocket containing two histidines and a glutamate. It also may explain how helothermine, a toxic peptide secreted by the beaded lizard, blocks Ca++ transporting ryanodine receptors. Little is known about the biological roles of the bacterial and archaeal SCP domains. Length = 122

>gnl|CDD|240180 cd05380, SCP_euk, SCP_euk: SCP-like extracellular protein domain, as found mainly in eukaryotes

 Score =  110 bits (276), Expect = 3e-31
 Identities = 37/119 (31%), Positives = 53/119 (44%), Gaps = 12/119 (10%)

Query: 74  LPLMWDYDLEKYARWWANQRKADCKLQHSFPEDNFKLGENIFWGSGS----TWTPRDAVS 129
             L WD +L   A+ WA      C  +HS   +   +G+N+  GS +         DAV+
Sbjct: 30  PKLKWDDELAALAQNWAKT----CVFEHSPCRNTGGVGQNLAAGSSTGSTVEELAEDAVN 85

Query: 130 VWAGEEKYYTYATN-TCQEGQQCGHYTQIVWKNTRRIGCARVVCDSGD---VFMTCNYD 184
            W  E K Y + +N T       GH+TQ+VW  T ++GCA   C         + CNY 
Sbjct: 86  AWYNELKDYGFGSNPTNNFNSGIGHFTQMVWAKTTKVGCAVARCGKDGGNKTVVVCNYS 144

This family includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. Length = 144

>gnl|CDD|240182 cd05382, SCP_GAPR-1_like, SCP_GAPR-1_like: SCP-like extracellular protein domain, golgi-associated plant pathogenesis related protein (GAPR)-like sub-family

 Score =  101 bits (254), Expect = 6e-28
 Identities = 46/136 (33%), Positives = 61/136 (44%), Gaps = 10/136 (7%)

Query: 56  EALQFLFDHNLVRAMKWELPLMWDYDLEKYARWWANQRKADCKLQHSFPEDNFKLGENIF 115
           E L     HN  RA+    PL  D +L K A+ WA +  +  KLQHS        GEN+ 
Sbjct: 5   ECLDA---HNEYRALHGAPPLKLDKELAKEAQKWAEKLASSGKLQHS---SPSGYGENLA 58

Query: 116 --WGSGSTWTPRDAVSVWAGEEKYYTYATNTCQEGQQCGHYTQIVWKNTRRIGCARVVCD 173
              GSG   T  +AV  W  E K Y +           GH+TQ+VWK++  +G       
Sbjct: 59  YASGSGPDLTGEEAVDSWYNEIKKYDFNKPGFSSK--TGHFTQVVWKSSTELGVGVAKSK 116

Query: 174 SGDVFMTCNYDPVGNY 189
            G V++   Y P GN 
Sbjct: 117 KGCVYVVARYRPAGNV 132

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, which combine SCP with a C-terminal cysteine rich domain, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. The human GAPR-1 protein has been reported to dimerize, and such a dimer may form an active site containing a catalytic triad. GAPR-1 and GLIPR-2 appear to be synonyms. Length = 132

>gnl|CDD|240184 cd05384, SCP_PRY1_like, SCP_PRY1_like: SCP-like extracellular protein domain, PRY1-like sub-family restricted to fungi

 Score = 95.8 bits (239), Expect = 8e-26
 Identities = 45/129 (34%), Positives = 62/129 (48%), Gaps = 10/129 (7%)

Query: 64  HNLVRAMKWELPLMWDYDLEKYARWWANQRKADCKLQHSFPEDNFKLGENIFWGSGSTWT 123
           HN  RA+    PL W+  L +YA+ +AN       L HS        GEN+  G  S   
Sbjct: 10  HNSKRALHGVQPLTWNNTLAEYAQDYANSYDCSGNLAHS----GGPYGENLAAGYPS--- 62

Query: 124 PRDAVSVWAGEEKYYTYATNTCQEGQQCGHYTQIVWKNTRRIGCARVVCDSG-DVFMTCN 182
              AV  W  E + Y Y  +     +  GH+TQ+VWK+T ++GCA   C      ++ C 
Sbjct: 63  GTSAVDAWYDEIEDYDY--SNPGFSEATGHFTQLVWKSTTQVGCAYKDCGGAWGWYIVCE 120

Query: 183 YDPVGNYVG 191
           YDP GN +G
Sbjct: 121 YDPAGNVIG 129

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. PRY1 is a yeast protein that is up-regulated in core ESCRT mutants. This PRY1-like group also contains fruiting body proteins SC7/14 from Schizophyllum commune. Length = 129

>gnl|CDD|240186 cd05559, SCP_HrTT-1, SCP_HrTT-1: SCP-like extracellular protein domain in HrTT-1, a tail-tip epidermis marker in ascidians

 Score = 94.5 bits (235), Expect = 4e-25
 Identities = 41/117 (35%), Positives = 59/117 (50%), Gaps = 11/117 (9%)

Query: 74  LPLMWDYDLEKYARWWANQRKADCKLQHSFPEDNFKLGENIFWGSGSTWTPRDAVSVWAG 133
           L + WD +L   A  +A      C   H+    + ++GEN+F  +G  +    AV  W  
Sbjct: 23  LKMTWDEELAALAEAYA----RKCIWDHNPDRGHLRVGENLFISTGPPFDATKAVEDWNN 78

Query: 134 EEKYYTYATNTCQEGQQCGHYTQIVWKNTRRIGCARVVCDSGDV-------FMTCNY 183
           E+  Y Y TNTC   + CGHYTQ+VW NT +IGC    C++ +V        + CNY
Sbjct: 79  EKLDYNYNTNTCAPNKMCGHYTQVVWANTFKIGCGSYFCETLEVLRWENATLLVCNY 135

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. Length = 136

>gnl|CDD|240185 cd05385, SCP_GLIPR-1_like, SCP_GLIPR-1_like: SCP-like extracellular protein domain, glioma pathogenesis-related protein (GLIPR)-like sub-family

 Score = 93.2 bits (232), Expect = 2e-24
 Identities = 48/144 (33%), Positives = 74/144 (51%), Gaps = 32/144 (22%)

Query: 64  HNLVRA--------MKWELPLMWDYDLEKYARWWANQRKADCKLQHSFPEDNFK------ 109
           HN +R+        M++   + WD  L K AR WA +    CK +H+             
Sbjct: 10  HNELRSKVSPPAANMRY---MTWDAALAKTARAWAKK----CKFKHNIYLGKRYKCHPKF 62

Query: 110 --LGENIFWGSGSTWTPRDAVSVWAGEEKYYTYATNTCQEGQQCGHYTQIVWKNTRRIGC 167
             +GENI+ GS   ++P++AV+ W  E K+Y + TN+C   + CGHYTQ+VW  + ++GC
Sbjct: 63  TSVGENIWLGSIYIFSPKNAVTSWYNEGKFYDFDTNSCS--RVCGHYTQVVWATSYKVGC 120

Query: 168 ARVVCD------SGDVFMTCNYDP 185
           A   C       +  +F+ CNY P
Sbjct: 121 AVAFCPNLGGIPNAAIFV-CNYAP 143

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. Length = 144

>gnl|CDD|215778 pfam00188, CAP, Cysteine-rich secretory protein family

 Score = 81.1 bits (200), Expect = 4e-20
 Identities = 35/125 (28%), Positives = 48/125 (38%), Gaps = 12/125 (9%)

Query: 64  HNLVRAMKWELPLM-WDYDLEKYARWWANQRKADCKLQHSFPEDNFKLGENIFWGSGSTW 122
           HN +R+     P + WD  L   A+  A      C     F  D    GEN+   S +  
Sbjct: 4   HNELRSAAGGAPPLSWDPTLAAAAQDHAAY----CADNGYFGHDY---GENLALVSVAGK 56

Query: 123 TPR---DAVSVWAGEEKYYTYATNTCQEGQQCGHYTQIVWKNTRRIGCARVVCDSGD-VF 178
                  AV  W  E K Y  A          GH T ++W  + ++GCA   C  G   +
Sbjct: 57  ADDPGVAAVENWYDEAKDYDAAVGINAWMSSPGHRTNLLWPKSTKVGCAVAKCGDGSSYY 116

Query: 179 MTCNY 183
           + CNY
Sbjct: 117 VVCNY 121

This is a large family of cysteine-rich secretory proteins, antigen 5, and pathogenesis-related 1 proteins (CAP) that are found in a wide range of organisms, including prokaryotes and non-vertebrate eukaryotes, The nine subfamilies of the mammalian CAP 'super'family include: the human glioma pathogenesis-related 1 (GLIPR1), Golgi associated pathogenesis related-1 (GAPR1) proteins, peptidase inhibitor 15 (PI15), peptidase inhibitor 16 (PI16), cysteine-rich secretory proteins (CRISPs), CRISP LCCL domain containing 1 (CRISPLD1), CRISP LCCL domain containing 2 (CRISPLD2), mannose receptor like and the R3H domain containing like proteins. Members are most often secreted and have an extracellular endocrine or paracrine function and are involved in processes including the regulation of extracellular matrix and branching morphogenesis, potentially as either proteases or protease inhibitors; in ion channel regulation in fertility; as tumour suppressor or pro-oncogenic genes in tissues including the prostate; and in cell-cell adhesion during fertilisation. The overall protein structural conservation within the CAP 'super'family results in fundamentally similar functions for the CAP domain in all members, yet the diversity outside of this core region dramatically alters the target specificity and, thus, the biological consequences. The Ca++-chelating function would fit with the various signalling processes (e.g. the CRISP proteins) that members of this family are involved in, and also the sequence and structural evidence of a conserved pocket containing two histidines and a glutamate. It also may explain how helothermine from Heloderma horridum horridum blocks the Ca++ transporting ryanodine receptors. Length = 121

>gnl|CDD|240183 cd05383, SCP_CRISP, SCP_CRISP: SCP-like extracellular protein domain, CRISP-like sub-family

 Score = 80.1 bits (198), Expect = 1e-19
 Identities = 40/119 (33%), Positives = 53/119 (44%), Gaps = 13/119 (10%)

Query: 74  LPLMWDYDLEKYARWWANQRKADCKLQHSFPE----DNFKLGENIFWGSG-STWTPRDAV 128
           L + W+ +  + A+ WAN     C L HS P          GENIF  S   +W+  D +
Sbjct: 25  LKMEWNEEAAQNAKKWANT----CNLTHSPPNGRTIGGITCGENIFMSSYPRSWS--DVI 78

Query: 129 SVWAGEEKYYTYATNTCQEGQQCGHYTQIVWKNTRRIGCARVVCDSGDV--FMTCNYDP 185
             W  E K + Y       G   GHYTQIVW  +  +GCA   C +     F  C+Y P
Sbjct: 79  QAWYDEYKDFKYGVGATPPGAVVGHYTQIVWYKSYLVGCAVAYCPNSKYKYFYVCHYCP 137

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, which combine SCP with a C-terminal cysteine rich domain, and allergen 5 from vespid venom. Involvement of CRISP in response to pathogens, fertilization, and sperm maturation have been proposed. One member, Tex31 from the venom duct of Conus textile, has been shown to possess proteolytic activity sensitive to serine protease inhibitors. SCP has also been proposed to be a Ca++ chelating serine protease. The Ca++-chelating function would fit with various signaling processes that members of this family, such as the CRISPs, are involved in, and is supported by sequence and structural evidence of a conserved pocket containing two histidines and a glutamate. It also may explain how helothermine, a toxic peptide secreted by the beaded lizard, blocks Ca++ transporting ryanodine receptors. One member, DE or CRISP-1, has been shown to mediate gamete fusion by binding to the egg surface; a sequence motif in the SCP domain plays a role in that binding. Length = 138

>gnl|CDD|240179 cd05379, SCP_bacterial, SCP_bacterial: SCP-like extracellular protein domain, as found in bacteria and archaea

 Score = 38.1 bits (89), Expect = 5e-04
 Identities = 30/140 (21%), Positives = 40/140 (28%), Gaps = 32/140 (22%)

Query: 57  ALQFLFDHNLVRAMKWELPLMWDYDLEKYARWWANQRKADCKLQH-----SFPEDNFK-- 109
             + L   N  RA     PL WD  L   A+  A    A+    H     S P D  +  
Sbjct: 1   EQEALELINAYRAQNGLPPLTWDPALAAAAQAHARDMAANGYFSHTGPDGSSPFDRARAA 60

Query: 110 ------LGENIFWGSGSTWTPRDAVSVWAGEEKYYTYATNTCQEGQQCGHYTQIVWKNTR 163
                  GENI +G     T   AV  W                    GH   I+  +  
Sbjct: 61  GYPYSSAGENIAYGYS---TAEAAVDGWMNSP----------------GHRANILNPDYT 101

Query: 164 RIGCARVVCDSGDVFMTCNY 183
            +G        G  +    +
Sbjct: 102 EVGVGVAYGGDGGYYWVQVF 121

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. Little is known about the biological roles of the bacterial and archaeal SCP domains. Length = 122

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	195
cd05381	136	SCP_PR-1_like SCP_PR-1_like: SCP-like extracellula	100.0
cd05384	129	SCP_PRY1_like SCP_PRY1_like: SCP-like extracellula	100.0
cd05382	132	SCP_GAPR-1_like SCP_GAPR-1_like: SCP-like extracel	100.0
cd05385	144	SCP_GLIPR-1_like SCP_GLIPR-1_like: SCP-like extrac	100.0
smart00198	144	SCP SCP / Tpx-1 / Ag5 / PR-1 / Sc7 family of extra	100.0
cd00168	122	SCP SCP: SCP-like extracellular protein domain, fo	100.0
cd05383	138	SCP_CRISP SCP_CRISP: SCP-like extracellular protei	100.0
cd05559	136	SCP_HrTT-1 SCP_HrTT-1: SCP-like extracellular prot	100.0
cd05380	144	SCP_euk SCP_euk: SCP-like extracellular protein do	100.0
KOG3017	225	consensus Defense-related protein containing SCP d	100.0
TIGR02909	127	spore_YkwD uncharacterized protein, YkwD family. M	99.91
PF00188	124	CAP: Cysteine-rich secretory protein family; Inter	99.88
cd05379	122	SCP_bacterial SCP_bacterial: SCP-like extracellula	99.78
COG2340	207	Uncharacterized protein with SCP/PR1 domains [Func	99.6
PF11054	254	Surface_antigen: Sporozoite TA4 surface antigen; I	86.92

>cd05381 SCP_PR-1_like SCP_PR-1_like: SCP-like extracellular protein domain, PR-1 like subfamily

Probab=100.00  E-value=4e-41  Score=243.32  Aligned_cols=134  Identities=57%  Similarity=1.162  Sum_probs=122.2

Q ss_pred             HHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHhhhcCCcCCCCCCCCCccceEEEEeeCCCCChhhhHHHHHhhhcc
Q 029298           58 LQFLFDHNLVRAMKWELPLMWDYDLEKYARWWANQRKADCKLQHSFPEDNFKLGENIFWGSGSTWTPRDAVSVWAGEEKY  137 (195)
Q Consensus        58 ~~iL~~hN~~R~~~~~~~L~wd~~La~~A~~~a~~~~~~c~~~h~~~~~~~~~GeN~~~~~~~~~~~~~~v~~W~~e~~~  137 (195)
                      ++||+.||++|+.++|++|+||++|++.||.||++|+..|...|+..    .+|||++++.....++.++|+.|++|...
T Consensus         2 ~~il~~hN~~R~~~~~~~L~Wd~~La~~A~~~a~~~~~~c~~~~~~~----~~GeNi~~~~~~~~~~~~~v~~W~~e~~~   77 (136)
T cd05381           2 QDFLDAHNAARAAVGVPPLKWDDTLAAYAQRYANQRRGDCALVHSNG----PYGENLFWGSGGNWSAADAVASWVSEKKY   77 (136)
T ss_pred             hHHHHHHHHHHHhcCCCcceECHHHHHHHHHHHHHhcCCCCcccCCC----CCCceEEEecCCCCCHHHHHHHHHhcccc
Confidence            58999999999999999999999999999999998888899888754    37999998766555789999999999999


Q ss_pred             CCCCCCCCCCCCccchHHHHHHHhcCeEeEEEEEeCC-CCEEEEEEccCCCCCCCCCCC
Q 029298          138 YTYATNTCQEGQQCGHYTQIVWKNTRRIGCARVVCDS-GDVFMTCNYDPVGNYVGERPY  195 (195)
Q Consensus       138 ~~~~~~~~~~~~~~~~ftqmiw~~t~~vGCa~~~c~~-~~~~~vC~Y~p~gn~~g~~~Y  195 (195)
                      |++..+.+..+..++|||||||+++++||||++.|.+ +++++||+|+|+||+.|++||
T Consensus        78 y~~~~~~~~~~~~~~hftq~vw~~t~~vGCa~~~c~~~~~~~vvC~Y~p~gn~~g~~~Y  136 (136)
T cd05381          78 YDYDSNTCAAGKMCGHYTQVVWRNTTRVGCARVTCDNGGGVFIICNYDPPGNYIGQRPY  136 (136)
T ss_pred             CCCCCCCcCCCccchHHHHHHHHhcCEeceEEEEeCCCCcEEEEEEeeCCCCCCCCCCC
Confidence            9998887777788999999999999999999999976 567999999999999999998

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), which accumulates after infections with pathogens, and may act as an anti-fungal agent or be involved in cell wall loosening. It also includes CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases.

>cd05384 SCP_PRY1_like SCP_PRY1_like: SCP-like extracellular protein domain, PRY1-like sub-family restricted to fungi

Probab=100.00  E-value=2.1e-37  Score=221.91  Aligned_cols=127  Identities=36%  Similarity=0.625  Sum_probs=111.8

Q ss_pred             HHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHhhhcCCcCCCCCCCCCccceEEEEeeCCCCChhhhHHHHHhhh
Q 029298           56 EALQFLFDHNLVRAMKWELPLMWDYDLEKYARWWANQRKADCKLQHSFPEDNFKLGENIFWGSGSTWTPRDAVSVWAGEE  135 (195)
Q Consensus        56 ~~~~iL~~hN~~R~~~~~~~L~wd~~La~~A~~~a~~~~~~c~~~h~~~~~~~~~GeN~~~~~~~~~~~~~~v~~W~~e~  135 (195)
                      +++.||+.||.+|+.+|+++|+||++|+..||.||++++..|.+.|+..    .+|||++.+..   +++.+|+.|++|.
T Consensus         2 ~~~~iL~~hN~~R~~~g~~~L~w~~~La~~A~~~a~~c~~~~~~~~~~~----~~geNi~~~~~---~~~~~v~~W~~e~   74 (129)
T cd05384           2 FASSILDAHNSKRALHGVQPLTWNNTLAEYAQDYANSYDCSGNLAHSGG----PYGENLAAGYP---SGTSAVDAWYDEI   74 (129)
T ss_pred             HHHHHHHHHHHHHHHcCCCcCccCHHHHHHHHHHHHHhccCCceecCCC----CCCcEEEEecC---CHHHHHHHHHhhh
Confidence            6889999999999999999999999999999999997766666888764    38999997653   6889999999999


Q ss_pred             ccCCCCCCCCCCCCccchHHHHHHHhcCeEeEEEEEeCC-CCEEEEEEccCCCCCCC
Q 029298          136 KYYTYATNTCQEGQQCGHYTQIVWKNTRRIGCARVVCDS-GDVFMTCNYDPVGNYVG  191 (195)
Q Consensus       136 ~~~~~~~~~~~~~~~~~~ftqmiw~~t~~vGCa~~~c~~-~~~~~vC~Y~p~gn~~g  191 (195)
                      ..|++..+.+  +..++|||||||+++++||||++.|.+ ..+++||+|+|+||+.|
T Consensus        75 ~~y~~~~~~~--~~~~~h~tqmvw~~t~~vGCa~~~c~~~~~~~~vC~Y~p~Gn~~g  129 (129)
T cd05384          75 EDYDYSNPGF--SEATGHFTQLVWKSTTQVGCAYKDCGGAWGWYIVCEYDPAGNVIG  129 (129)
T ss_pred             hhCCCCCCCC--CCcccchhhhhhhccceeeeEEEEeCCCCeEEEEEEEECCCCCCc
Confidence            9999877543  467899999999999999999999976 35789999999999876

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. PRY1 is a yeast protein that is up-regulated in core ESCRT mutants. This PRY1-like group also contains fruiting body proteins SC7/14 from Schizophyllum commune.

>cd05382 SCP_GAPR-1_like SCP_GAPR-1_like: SCP-like extracellular protein domain, golgi-associated plant pathogenesis related protein (GAPR)-like sub-family

Probab=100.00  E-value=1.8e-37  Score=222.90  Aligned_cols=129  Identities=35%  Similarity=0.560  Sum_probs=114.6

Q ss_pred             HHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHhhhcCCcCCCCCCCCCccceEEEEeeC--CCCChhhhHHHHHh
Q 029298           56 EALQFLFDHNLVRAMKWELPLMWDYDLEKYARWWANQRKADCKLQHSFPEDNFKLGENIFWGSG--STWTPRDAVSVWAG  133 (195)
Q Consensus        56 ~~~~iL~~hN~~R~~~~~~~L~wd~~La~~A~~~a~~~~~~c~~~h~~~~~~~~~GeN~~~~~~--~~~~~~~~v~~W~~  133 (195)
                      +++.||+.||++|+++||++|+||++|+..||.||++++..+.+.|+.+.   .+|||++++..  ....++.+|+.|++
T Consensus         2 ~~~~iL~~hN~~R~~~g~~~L~wd~~La~~A~~~a~~c~~~~~~~h~~~~---~~GeN~~~~~~~~~~~~~~~~v~~W~~   78 (132)
T cd05382           2 FQKECLDAHNEYRALHGAPPLKLDKELAKEAQKWAEKLASSGKLQHSSPS---GYGENLAYASGSGPDLTGEEAVDSWYN   78 (132)
T ss_pred             HHHHHHHHHHHHHHHcCCCcCeeCHHHHHHHHHHHHHhhhcCceeCCCCC---CCCceeEEecCCCCCCCHHHHHHHHHh
Confidence            68899999999999999999999999999999999977777778887754   58999998764  34578999999999


Q ss_pred             hhccCCCCCCCCCCCCccchHHHHHHHhcCeEeEEEEEeCCCCEEEEEEccCCCCC
Q 029298          134 EEKYYTYATNTCQEGQQCGHYTQIVWKNTRRIGCARVVCDSGDVFMTCNYDPVGNY  189 (195)
Q Consensus       134 e~~~~~~~~~~~~~~~~~~~ftqmiw~~t~~vGCa~~~c~~~~~~~vC~Y~p~gn~  189 (195)
                      |...|++..+.  .+..++||+||||+++++||||++.|.++.+++||+|+|+||+
T Consensus        79 e~~~y~~~~~~--~~~~~gh~tqmvw~~t~~vGCa~~~~~~~~~~~vC~Y~p~Gn~  132 (132)
T cd05382          79 EIKKYDFNKPG--FSSKTGHFTQVVWKSSTELGVGVAKSKKGCVYVVARYRPAGNV  132 (132)
T ss_pred             ccccCCCCCCC--CCCCCCCeEEeEecCCCceeeEEEEcCCCCEEEEEEEeCCCCC
Confidence            99999987543  3467899999999999999999999987788999999999996

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, which combine SCP with a C-terminal cysteine rich domain, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. The human GAPR-1 protein has been reported to dimerize, and such a dimer may form an active site containing a catalytic triad. GAPR-1 and GLIPR-2 appear to be synonyms.

>cd05385 SCP_GLIPR-1_like SCP_GLIPR-1_like: SCP-like extracellular protein domain, glioma pathogenesis-related protein (GLIPR)-like sub-family

Probab=100.00  E-value=6e-35  Score=212.99  Aligned_cols=125  Identities=37%  Similarity=0.743  Sum_probs=108.4

Q ss_pred             HHHHHHHHHHHHHhhC-----CCCCCCchHHHHHHHHHHHHHhhhcCCcCCCCCCCC--------CccceEEEEeeCCCC
Q 029298           56 EALQFLFDHNLVRAMK-----WELPLMWDYDLEKYARWWANQRKADCKLQHSFPEDN--------FKLGENIFWGSGSTW  122 (195)
Q Consensus        56 ~~~~iL~~hN~~R~~~-----~~~~L~wd~~La~~A~~~a~~~~~~c~~~h~~~~~~--------~~~GeN~~~~~~~~~  122 (195)
                      ++++||+.||++|+.+     +|++|+||++|++.||.||+    +|.+.|+.+...        ..+||||+.......
T Consensus         2 f~~~~L~~HN~~R~~~~p~a~~m~~l~Wd~~La~~Aq~~a~----~C~~~~~~~~~~~~~~~~~~~~~GeNi~~~~~~~~   77 (144)
T cd05385           2 FIDECVRIHNELRSKVSPPAANMRYMTWDAALAKTARAWAK----KCKFKHNIYLGKRYKCHPKFTSVGENIWLGSIYIF   77 (144)
T ss_pred             HHHHHHHHHHHHHhhCCCCcccCcccccCHHHHHHHHHHHh----cCCCCCCchhhcccccccccCcccceeeecccCCC
Confidence            6789999999999998     68899999999999999999    999998765321        248999987765556


Q ss_pred             ChhhhHHHHHhhhccCCCCCCCCCCCCccchHHHHHHHhcCeEeEEEEEeCCCC-----EEEEEEccCC
Q 029298          123 TPRDAVSVWAGEEKYYTYATNTCQEGQQCGHYTQIVWKNTRRIGCARVVCDSGD-----VFMTCNYDPV  186 (195)
Q Consensus       123 ~~~~~v~~W~~e~~~~~~~~~~~~~~~~~~~ftqmiw~~t~~vGCa~~~c~~~~-----~~~vC~Y~p~  186 (195)
                      .+.++|+.||+|..+|+|..+.+.  ..++|||||||+++++||||++.|.+++     .++||+|+|+
T Consensus        78 ~~~~av~~W~~e~~~y~~~~~~~~--~~~ghftqmvw~~t~~vGCa~~~c~~~~~~~~~~~vVC~Y~p~  144 (144)
T cd05385          78 SPKNAVTSWYNEGKFYDFDTNSCS--RVCGHYTQVVWATSYKVGCAVAFCPNLGGIPNAAIFVCNYAPA  144 (144)
T ss_pred             CHHHHHHHHHHHHHhCCCCCCCCC--CcccCHHHHHHhhccccceEEEECCCCCCccccEEEEEeCCCC
Confidence            788999999999999998876654  5789999999999999999999998643     5899999994

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases.

>smart00198 SCP SCP / Tpx-1 / Ag5 / PR-1 / Sc7 family of extracellular domains

Probab=100.00  E-value=9.6e-35  Score=211.69  Aligned_cols=124  Identities=39%  Similarity=0.763  Sum_probs=110.4

Q ss_pred             HHHHHHHHHHHHHhhCC-----------CCCCCchHHHHHHHHHHHHHhhhcCCcCCCCCCCCCccceEEEEeeC----C
Q 029298           56 EALQFLFDHNLVRAMKW-----------ELPLMWDYDLEKYARWWANQRKADCKLQHSFPEDNFKLGENIFWGSG----S  120 (195)
Q Consensus        56 ~~~~iL~~hN~~R~~~~-----------~~~L~wd~~La~~A~~~a~~~~~~c~~~h~~~~~~~~~GeN~~~~~~----~  120 (195)
                      .++.||+.||.+|+.++           |++|+||++|+..|+.||+    +|...|+.+.   .+|||+++...    .
T Consensus         2 ~~~~iL~~HN~~R~~~a~G~~~~p~a~~m~~l~Wd~~La~~A~~~a~----~C~~~~~~~~---~~GeNi~~~~~~~~~~   74 (144)
T smart00198        2 QQQEILDAHNKLRSQVAKGLLANPAASNMLKLTWDCELASSAQNWAN----QCPFGHSTPR---GYGENLAWWSSSTDLP   74 (144)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCcccccccccCCHHHHHHHHHHHH----hCCCcCCCcC---CcCcceEEecccCccc
Confidence            57899999999999988           9999999999999999999    9999988754   58999997654    2


Q ss_pred             CCChhhhHHHHHhhhccCCCCCCCCCC-CCccchHHHHHHHhcCeEeEEEEEeCCCC---EEEEEEccCC
Q 029298          121 TWTPRDAVSVWAGEEKYYTYATNTCQE-GQQCGHYTQIVWKNTRRIGCARVVCDSGD---VFMTCNYDPV  186 (195)
Q Consensus       121 ~~~~~~~v~~W~~e~~~~~~~~~~~~~-~~~~~~ftqmiw~~t~~vGCa~~~c~~~~---~~~vC~Y~p~  186 (195)
                      ...+..+|+.||+|...|++..+.+.. +..++|||||||+++++||||++.|.++.   +++||+|+|+
T Consensus        75 ~~~~~~av~~W~~e~~~y~~~~~~~~~~~~~~~hftqmvw~~s~~vGCa~~~c~~~~~~~~~~vC~Y~P~  144 (144)
T smart00198       75 ITYASAAVQLWYDEFQDYGYSSNTCKDTNGKIGHYTQVVWAKTYKVGCGVSNCPDGTKKKTVVVCNYDPP  144 (144)
T ss_pred             chhHHHHHHHHHHHHHHcCCCCCccccCccchhHHHHHHHHhcCCcceEEEECCCCCcceEEEEEecCCC
Confidence            345788999999999999999887665 67899999999999999999999998775   5999999995

Human glioma pathogenesis-related protein GliPR and the plant pathogenesis-related protein represent functional links between plant defense systems and human immune system. This family has no known function.

>cd00168 SCP SCP: SCP-like extracellular protein domain, found in eukaryotes and prokaryotes

Probab=100.00  E-value=2.6e-34  Score=203.89  Aligned_cols=120  Identities=38%  Similarity=0.626  Sum_probs=108.4

Q ss_pred             HHHHHHHHHHHhhC-CCCCCCchHHHHHHHHHHHHHhhhcCCcCCCCCCCCCccceEEEEeeCCCCChhhhHHHHHhhhc
Q 029298           58 LQFLFDHNLVRAMK-WELPLMWDYDLEKYARWWANQRKADCKLQHSFPEDNFKLGENIFWGSGSTWTPRDAVSVWAGEEK  136 (195)
Q Consensus        58 ~~iL~~hN~~R~~~-~~~~L~wd~~La~~A~~~a~~~~~~c~~~h~~~~~~~~~GeN~~~~~~~~~~~~~~v~~W~~e~~  136 (195)
                      ++||+.||.+|+.+ +|+||+||++|+..|+.||+    +|.+.|+.+..+..+|||++.+..+ .+++.+|+.|++|..
T Consensus         2 ~~il~~hN~~R~~~a~~~~L~wd~~La~~A~~~a~----~c~~~h~~~~~~~~~geNi~~~~~~-~~~~~~v~~W~~e~~   76 (122)
T cd00168           2 QEVVRLHNSYRAKVNGMLPMSWDAELAKTAQNYAN----RCIFKHSGEDGRGFVGENLAAGSYD-MTGPAAVQAWYNEIK   76 (122)
T ss_pred             cHHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHHh----hccccCCCcccCCCCCceeEEecCC-CCHHHHHHHHHHHHH
Confidence            48999999999999 99999999999999999999    9999999887767799999987654 578999999999999


Q ss_pred             cCCCCCCCCCCCCccchHHHHHHHhcCeEeEEEEEeCCCCEEEEEEcc
Q 029298          137 YYTYATNTCQEGQQCGHYTQIVWKNTRRIGCARVVCDSGDVFMTCNYD  184 (195)
Q Consensus       137 ~~~~~~~~~~~~~~~~~ftqmiw~~t~~vGCa~~~c~~~~~~~vC~Y~  184 (195)
                      .|+|..+  ..+..++||+||||+++++||||++.|.+++.++||+|+
T Consensus        77 ~y~~~~~--~~~~~~~h~~qmvw~~s~~vGca~~~~~~~~~~~vC~Y~  122 (122)
T cd00168          77 NYNFGQP--GFSSGTGHYTQVVWKNTTKIGCGVAFCGSNSYYVVCNYG  122 (122)
T ss_pred             hCCCCCC--CCCCCccchhhhhcccCCeeeeEEEEcCCCCEEEEEeCc
Confidence            9998744  334668999999999999999999999877889999995

This family includes plant pathogenesis-related protein 1 (PR-1), which accumulates after infections with pathogens, and may act as an anti-fungal agent or be involved in cell wall loosening. This family also includes CRISPs, mammalian cysteine-rich secretory proteins, which combine SCP with a C-terminal cysteine rich domain, and allergen 5 from vespid venom. Roles for CRISP, in response to pathogens, fertilization, and sperm maturation have been proposed. One member, Tex31 from the venom duct of Conus textile, has been shown to possess proteolytic activity sensitive to serine protease inhibitors. The human GAPR-1 protein has been reported to dimerize, and such a dimer may form an active site containing a catalytic triad. SCP has also been proposed to be a Ca++ chelating serine protease. The Ca++-chelating function would fit with various signaling processes that members of this family, such as

>cd05383 SCP_CRISP SCP_CRISP: SCP-like extracellular protein domain, CRISP-like sub-family

Probab=100.00  E-value=2.9e-34  Score=207.90  Aligned_cols=126  Identities=33%  Similarity=0.612  Sum_probs=109.1

Q ss_pred             HHHHHHHHHHHHHhhCC-----CCCCCchHHHHHHHHHHHHHhhhcCCcCCCCCCC----CCccceEEEEeeCCCCChhh
Q 029298           56 EALQFLFDHNLVRAMKW-----ELPLMWDYDLEKYARWWANQRKADCKLQHSFPED----NFKLGENIFWGSGSTWTPRD  126 (195)
Q Consensus        56 ~~~~iL~~hN~~R~~~~-----~~~L~wd~~La~~A~~~a~~~~~~c~~~h~~~~~----~~~~GeN~~~~~~~~~~~~~  126 (195)
                      .++.||+.||.+|+.+.     |++|+||++||..||.||+    +|.+.|+.+..    ...+|||++.... ..+.++
T Consensus         2 ~~~~il~~HN~~R~~~~p~a~~M~~l~Wd~~La~~A~~~a~----~C~~~~~~~~~~~~~~~~~GeNl~~~~~-~~~~~~   76 (138)
T cd05383           2 VQKEIVDLHNELRRSVNPTASNMLKMEWNEEAAQNAKKWAN----TCNLTHSPPNGRTIGGITCGENIFMSSY-PRSWSD   76 (138)
T ss_pred             HHHHHHHHHHHHhccCCCCcccCcccEeCHHHHHHHHHHHh----cCCCcCCchhhcccCCCCcceeeeccCC-CCCHHH
Confidence            57899999999999864     5579999999999999999    99998986532    1258999997643 346789


Q ss_pred             hHHHHHhhhccCCCCCCCCCCCCccchHHHHHHHhcCeEeEEEEEeCCC--CEEEEEEccCC
Q 029298          127 AVSVWAGEEKYYTYATNTCQEGQQCGHYTQIVWKNTRRIGCARVVCDSG--DVFMTCNYDPV  186 (195)
Q Consensus       127 ~v~~W~~e~~~~~~~~~~~~~~~~~~~ftqmiw~~t~~vGCa~~~c~~~--~~~~vC~Y~p~  186 (195)
                      +|+.||+|..+|++..+.+..+..++|||||||+++++||||++.|.++  ++++||+|+|+
T Consensus        77 av~~W~~e~~~y~~~~~~~~~~~~~~hftqmvw~~t~~vGCa~~~c~~~~~~~~~vC~Y~P~  138 (138)
T cd05383          77 VIQAWYDEYKDFKYGVGATPPGAVVGHYTQIVWYKSYLVGCAVAYCPNSKYKYFYVCHYCPA  138 (138)
T ss_pred             HHHHHHHHHHhCCCCCCCCCCCCchhhHHHHHHHhccccceEEEECCCCCcCEEEEEecCCC
Confidence            9999999999999998777677889999999999999999999999874  57999999995

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, which combine SCP with a C-terminal cysteine rich domain, and allergen 5 from vespid venom. Involvement of CRISP in response to pathogens, fertilization, and sperm maturation have been proposed. One member, Tex31 from the venom duct of Conus textile, has been shown to possess proteolytic activity sensitive to serine protease inhibitors. SCP has also been proposed to be a Ca++ chelating serine protease. The Ca++-chelating function would fit with various signaling processes that members of this family, such as the CRISPs, are involved in, and is supported by sequence and structural evidence of a conserved pocket containing two histidines and a glutamate. It also may explain how helothermine, a toxic peptide secreted by the beaded lizard, blocks Ca++ t

>cd05559 SCP_HrTT-1 SCP_HrTT-1: SCP-like extracellular protein domain in HrTT-1, a tail-tip epidermis marker in ascidians

Probab=100.00  E-value=4.4e-34  Score=206.48  Aligned_cols=124  Identities=35%  Similarity=0.730  Sum_probs=109.2

Q ss_pred             HHHHHHHHHHHHhhCC-----CCCCCchHHHHHHHHHHHHHhhhcCCcCCCCCCCCCccceEEEEeeCCCCChhhhHHHH
Q 029298           57 ALQFLFDHNLVRAMKW-----ELPLMWDYDLEKYARWWANQRKADCKLQHSFPEDNFKLGENIFWGSGSTWTPRDAVSVW  131 (195)
Q Consensus        57 ~~~iL~~hN~~R~~~~-----~~~L~wd~~La~~A~~~a~~~~~~c~~~h~~~~~~~~~GeN~~~~~~~~~~~~~~v~~W  131 (195)
                      |+.||+.||++|+.++     |.+|+||++|+..||.||+    +|.+.|+...+...+|||++...+....+.++|+.|
T Consensus         1 r~~il~~HN~~R~~~~p~a~~m~~L~Wd~~La~~A~~~a~----~C~~~~~~~~~~~~~GeNl~~~~~~~~~~~~~v~~W   76 (136)
T cd05559           1 RLNLVDLHNQYRSQVSPPAANMLKMTWDEELAALAEAYAR----KCIWDHNPDRGHLRVGENLFISTGPPFDATKAVEDW   76 (136)
T ss_pred             CcHHHHHHHHHHhhCCCccccCcccccCHHHHHHHHHHHH----hccccCCCcccCCCceeeeeecCCCCCCHHHHHHHH
Confidence            3589999999999874     5579999999999999999    999999876655568999998766556789999999


Q ss_pred             HhhhccCCCCCCCCCCCCccchHHHHHHHhcCeEeEEEEEeCCC-------CEEEEEEcc
Q 029298          132 AGEEKYYTYATNTCQEGQQCGHYTQIVWKNTRRIGCARVVCDSG-------DVFMTCNYD  184 (195)
Q Consensus       132 ~~e~~~~~~~~~~~~~~~~~~~ftqmiw~~t~~vGCa~~~c~~~-------~~~~vC~Y~  184 (195)
                      ++|...|++..+.+..+..++|||||||+++++||||++.|.++       .+++||+|+
T Consensus        77 ~~e~~~y~~~~~~~~~~~~~~hftqmvw~~t~~vGCa~~~c~~~~~~~~~~~~~~vC~Y~  136 (136)
T cd05559          77 NNEKLDYNYNTNTCAPNKMCGHYTQVVWANTFKIGCGSYFCETLEVLRWENATLLVCNYG  136 (136)
T ss_pred             HHHHHhcCCCCCCCCCCCcccchHHHHHhccCccceEEEECCCCCCCCcccCEEEEecCC
Confidence            99999999998888777889999999999999999999999642       368999995

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases.

>cd05380 SCP_euk SCP_euk: SCP-like extracellular protein domain, as found mainly in eukaryotes

Probab=100.00  E-value=1.3e-32  Score=199.95  Aligned_cols=123  Identities=33%  Similarity=0.586  Sum_probs=107.5

Q ss_pred             HHHHHHHHHHHhhC------------CCCCCCchHHHHHHHHHHHHHhhhcCCcCCCCCCCCCccceEEEEeeCCC----
Q 029298           58 LQFLFDHNLVRAMK------------WELPLMWDYDLEKYARWWANQRKADCKLQHSFPEDNFKLGENIFWGSGST----  121 (195)
Q Consensus        58 ~~iL~~hN~~R~~~------------~~~~L~wd~~La~~A~~~a~~~~~~c~~~h~~~~~~~~~GeN~~~~~~~~----  121 (195)
                      +.||+.||.+|+.+            +|++|.||++|++.|+.||+    +|.+.|+.+..+..+|||++......    
T Consensus         2 ~~il~~HN~~R~~~a~g~~~~~p~a~~m~~l~Wd~~La~~A~~~a~----~C~~~~~~~~~~~~~GeNl~~~~~~~~~~~   77 (144)
T cd05380           2 QAILDAHNELRSKVAKGTYSLLPPASNMPKLKWDDELAALAQNWAK----TCVFEHSPCRNTGGVGQNLAAGSSTGSTVE   77 (144)
T ss_pred             cHHHHHHHHHHHHhhcCCCCCCCchhcCCcceeCHHHHHHHHHHHh----cCCCcCCcccCCCCCCcEEEEeccCCCCHH
Confidence            58999999999998            89999999999999999999    99999987765556899999876542    


Q ss_pred             CChhhhHHHHHhhhccCCCCCC-CCCCCCccchHHHHHHHhcCeEeEEEEEeCC---CCEEEEEEcc
Q 029298          122 WTPRDAVSVWAGEEKYYTYATN-TCQEGQQCGHYTQIVWKNTRRIGCARVVCDS---GDVFMTCNYD  184 (195)
Q Consensus       122 ~~~~~~v~~W~~e~~~~~~~~~-~~~~~~~~~~ftqmiw~~t~~vGCa~~~c~~---~~~~~vC~Y~  184 (195)
                      ..+.++|+.|++|...|++... .+..+..++||+||||+++++||||++.|..   ...++||+|+
T Consensus        78 ~~~~~~v~~W~~e~~~~~~~~~~~~~~~~~~~hftq~vw~~t~~vGCa~~~~~~~~~~~~~~vC~Y~  144 (144)
T cd05380          78 ELAEDAVNAWYNELKDYGFGSNPTNNFNSGIGHFTQMVWAKTTKVGCAVARCGKDGGNKTVVVCNYS  144 (144)
T ss_pred             HHHHHHHHHHHHHHHHcCCCcCcccccccchhHHHHHHHHhcCccceEEEEeecCCceEEEEEecCC
Confidence            3578899999999999998876 4455678999999999999999999999975   4579999995

This family includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases.

>KOG3017 consensus Defense-related protein containing SCP domain [Function unknown]

Probab=100.00  E-value=5e-33  Score=216.92  Aligned_cols=138  Identities=38%  Similarity=0.711  Sum_probs=119.8

Q ss_pred             hHHHHHHHHHHHHHHhhCC-----CCCCCchHHHHHHHHHHHHHhhhcCCcCCCCCCC--CCccceEEEEeeCCC-----
Q 029298           54 IGEALQFLFDHNLVRAMKW-----ELPLMWDYDLEKYARWWANQRKADCKLQHSFPED--NFKLGENIFWGSGST-----  121 (195)
Q Consensus        54 ~~~~~~iL~~hN~~R~~~~-----~~~L~wd~~La~~A~~~a~~~~~~c~~~h~~~~~--~~~~GeN~~~~~~~~-----  121 (195)
                      ..++++|++.||.+|..++     |++|+||++||..||.||+    +|.+.|.....  ...+|||++++.+..     
T Consensus        39 ~~~~~~~~~~hn~~r~~~~~~as~m~~m~Wd~~La~~Aq~~a~----~c~~~~~~~~~~~~~~~GeNl~~~~~~~~~~~~  114 (225)
T KOG3017|consen   39 NNLRSEILNGHNVARGAVGPPASNMMKLKWDDELAALAQNWAN----TCPFGHDKCVHTSFGPYGENLAWGWSSNPPLSL  114 (225)
T ss_pred             HHHHHHHHhhhHHhcCccCCchHhCccccCCHHHHHHHHHHHh----hCCcccCccccccCCCCcccceeeccCCCCccc
Confidence            3588999999999999998     9999999999999999999    99998886543  235799999877642     


Q ss_pred             -CChhhhHHHHHhhhccCCCCCCCCCC---CCccchHHHHHHHhcCeEeEEEEEeCCC-----CEEEEEEccCCCCCCC-
Q 029298          122 -WTPRDAVSVWAGEEKYYTYATNTCQE---GQQCGHYTQIVWKNTRRIGCARVVCDSG-----DVFMTCNYDPVGNYVG-  191 (195)
Q Consensus       122 -~~~~~~v~~W~~e~~~~~~~~~~~~~---~~~~~~ftqmiw~~t~~vGCa~~~c~~~-----~~~~vC~Y~p~gn~~g-  191 (195)
                       .....+++.|+.|...|++..+.+..   +..+||||||||+++++||||++.|.++     .+++||+|+|+||..+ 
T Consensus       115 ~~~~~~a~~~w~~e~~~~~~~~~~~~~~~~~~~~gHyTQ~vw~~s~~vGCgv~~c~~~~~~~~~~~~vC~Y~p~g~~~~~  194 (225)
T KOG3017|consen  115 DTSGALAVEAWESEFQEYDWSSNTCSSADFGEGIGHYTQMVWAKSTKVGCGVVRCGNGSNGYNTVAVVCNYDPPGNNING  194 (225)
T ss_pred             cccHHHHHHHHHHHHHHccCcccccCcccCCCcceEEEEEEEeCCceeceeeccCCCCCCCcceEEEEEEeecCCCCcCC
Confidence             34677999999999999999999875   7889999999999999999999999987     4699999999955544 


Q ss_pred             CCCC
Q 029298          192 ERPY  195 (195)
Q Consensus       192 ~~~Y  195 (195)
                      +.+|
T Consensus       195 ~~~y  198 (225)
T KOG3017|consen  195 EIPY  198 (225)
T ss_pred             CCcC
Confidence            6766

>TIGR02909 spore_YkwD uncharacterized protein, YkwD family

Probab=99.91  E-value=1.9e-23  Score=149.15  Aligned_cols=111  Identities=27%  Similarity=0.299  Sum_probs=97.9

Q ss_pred             HHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHhhhcCCcCCCCCCCC-------------CccceEEEEeeCCC
Q 029298           55 GEALQFLFDHNLVRAMKWELPLMWDYDLEKYARWWANQRKADCKLQHSFPEDN-------------FKLGENIFWGSGST  121 (195)
Q Consensus        55 ~~~~~iL~~hN~~R~~~~~~~L~wd~~La~~A~~~a~~~~~~c~~~h~~~~~~-------------~~~GeN~~~~~~~~  121 (195)
                      ++++++|+.||++|+++|++||+||+.|++.|+.||++|+..+.++|..+.+.             ..+||||+.+..  
T Consensus         3 ~~e~~~l~~iN~~R~~~Gl~pL~~~~~L~~~A~~hA~~ma~~~~~~H~~~~~~~~~~r~~~~g~~~~~~gENi~~g~~--   80 (127)
T TIGR02909         3 AEEKRVVELVNAERAKNGLKPLKADPELSKVARLKSEDMRDKNYFSHTSPTYGSPFDMMKKFGISYRMAGENIAYGNS--   80 (127)
T ss_pred             HHHHHHHHHHHHHHHHcCCCCCccCHHHHHHHHHHHHHHHhCCcccccCCCCCCHHHHHHHcCCCcccceeeeeccCC--
Confidence            47889999999999999999999999999999999999999999999876532             135999997654  


Q ss_pred             CChhhhHHHHHhhhccCCCCCCCCCCCCccchHHHHHHHhcCeEeEEEEEeCCCCEEEEEEcc
Q 029298          122 WTPRDAVSVWAGEEKYYTYATNTCQEGQQCGHYTQIVWKNTRRIGCARVVCDSGDVFMTCNYD  184 (195)
Q Consensus       122 ~~~~~~v~~W~~e~~~~~~~~~~~~~~~~~~~ftqmiw~~t~~vGCa~~~c~~~~~~~vC~Y~  184 (195)
                       +++.+|+.|+++                .+|+++|+|.+.++||||++.+.++++|+|-.|.
T Consensus        81 -~~~~~v~~W~~S----------------~gH~~nil~~~~~~~Gvg~~~~~~g~~y~~q~F~  126 (127)
T TIGR02909        81 -TVEAVHNAWMNS----------------PGHRANILNPNYTEIGVGYVEGGSGGIYWTQMFI  126 (127)
T ss_pred             -CHHHHHHHHHcC----------------HhHHHHHcCCCcCeEeEEEEeCCCCCeEEEEEec
Confidence             688999999854                3899999999999999999999888888888774

Members of this protein family represent a subset of those belonging to Pfam family pfam00188 (SCP-like extracellular protein). Based on currently cuttoffs for this model, all member proteins are found in Bacteria capable of endospore formation. Members include a named but uncharacterized protein, YkwD of Bacillus subtilis. Only the C-terminal region is well-conserved and is included in the seed alignment for this model. Three members of this family have an N-terminal domain homologous to the spore coat assembly protein SafA.

>PF00188 CAP: Cysteine-rich secretory protein family; InterPro: IPR014044 The cysteine-rich secretory proteins, antigen 5, and pathogenesis-related 1 proteins (CAP) superfamily proteins are found in a wide range of organisms, including prokaryotes [] and non-vertebrate eukaryotes [], The nine subfamilies of the mammalian CAP superfamily include: the human glioma pathogenesis-related 1 (GLIPR1), Golgi associated pathogenesis related-1 (GAPR1) proteins, peptidase inhibitor 15 (PI15), peptidase inhibitor 16 (PI16), cysteine-rich secretory proteins (CRISPs), CRISP LCCL domain containing 1 (CRISPLD1), CRISP LCCL domain containing 2 (CRISPLD2), mannose receptor like and the R3H domain containing like proteins

Probab=99.88  E-value=9.7e-23  Score=141.96  Aligned_cols=116  Identities=35%  Similarity=0.506  Sum_probs=84.1

Q ss_pred             HHHHHHHH-hhCCCCCCCchHHHHHHHHHHHHHhhhcCCcCCCCCCCCCccceEEEEeeCCCCChhh---hHHHHHhhhc
Q 029298           61 LFDHNLVR-AMKWELPLMWDYDLEKYARWWANQRKADCKLQHSFPEDNFKLGENIFWGSGSTWTPRD---AVSVWAGEEK  136 (195)
Q Consensus        61 L~~hN~~R-~~~~~~~L~wd~~La~~A~~~a~~~~~~c~~~h~~~~~~~~~GeN~~~~~~~~~~~~~---~v~~W~~e~~  136 (195)
                      |+.||++| +..++++|+||++|++.|+.+|+    .|...+...   ...|+++............   .++.|+.+..
T Consensus         1 L~~~N~~R~~~~~~~~L~~d~~L~~~A~~~a~----~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   73 (124)
T PF00188_consen    1 LDLHNEYRSAANGLPPLKWDPELAKAAQAHAK----YCANSNSLS---HDSGENGSQSSRFGSYSDAQVTAVENWYSESK   73 (124)
T ss_dssp             HHHHHHHHHBSSTBB--EE-HHHHHHHHHHHT----TTCSSEETT---EESEEEEEEESSTTSHHHHHHHHHHHHHGGGG
T ss_pred             CHHHHHHHHHhCCCCCCeeCHHHHHHHHHhhH----Hhhhhcccc---cccCCCCccccccccccchhhHHHHHHHhccc
Confidence            78999999 88888899999999999999999    665522111   1358888866543221111   1899999999


Q ss_pred             cCCCCC--CCCCCCCccchHHHHHHHhcCeEeEEEEEeCCCC--EEEEEEc
Q 029298          137 YYTYAT--NTCQEGQQCGHYTQIVWKNTRRIGCARVVCDSGD--VFMTCNY  183 (195)
Q Consensus       137 ~~~~~~--~~~~~~~~~~~ftqmiw~~t~~vGCa~~~c~~~~--~~~vC~Y  183 (195)
                      .+....  ........++||+||+|.++++||||++.|.+++  +++||.|
T Consensus        74 ~~~~~~~~~~~~~~~~~~h~~~ll~~~~~~iGca~~~~~~~~~~~~~vc~y  124 (124)
T PF00188_consen   74 NYNFQNQSIFNSWMNSPGHFTNLLWPNTTRIGCAVANCPNGKNNYYWVCNY  124 (124)
T ss_dssp             GEETTCSTEESSTTSTCHHHHHHT-TT--EEEEEEEEETTSSSEEEEEEEE
T ss_pred             ccccccchhhhccCCchhhhhhhhcCCCCEEEEEEEEeCCCCeeEEEEEEC
Confidence            888762  2223456789999999999999999999999877  8999998

Members are most often secreted and have an extracellular endocrine or paracrine function and are involved in processes including the regulation of extracellular matrix and branching morphogenesis, potentially as either proteases or protease inhibitors; in ion channel regulation in fertility; as tumour suppressor or pro-oncogenic genes in tissues including the prostate; and in cell-cell adhesion during fertilisation. The overall protein structural conservation within the CAP superfamily results in fundamentally similar functions for the CAP domain in all members, yet the diversity outside of this core region dramatically alters the target specificity and, thus, the biological consequences []. The Ca++-chelating function [] would fit with the various signalling processes (e.g. the CRISP proteins) that members of this family are involved in, and also the sequence and structural evidence of a conserved pocket containing two histidines and a glutamate. It also may explain how Q91055 from SWISSPROT blocks the Ca++ transporting ryanodine receptors. This entry represents the CAP domain common to all members of the CAP superfamily. The CAP domain forms a unique 3 layer alpha-beta-alpha fold with some, though not all, of the structural elements found in proteases [].; PDB: 3U3N_C 3U3U_C 3U3L_C 1U53_A 1RC9_A 1SMB_A 3NT8_B 1QNX_A 1WVR_A 3Q2U_A ....

>cd05379 SCP_bacterial SCP_bacterial: SCP-like extracellular protein domain, as found in bacteria and archaea

Probab=99.78  E-value=2.1e-18  Score=121.49  Aligned_cols=107  Identities=26%  Similarity=0.326  Sum_probs=93.6

Q ss_pred             HHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHhhhcCCcCCCCCCCCC-------------ccceEEEEeeCCCCCh
Q 029298           58 LQFLFDHNLVRAMKWELPLMWDYDLEKYARWWANQRKADCKLQHSFPEDNF-------------KLGENIFWGSGSTWTP  124 (195)
Q Consensus        58 ~~iL~~hN~~R~~~~~~~L~wd~~La~~A~~~a~~~~~~c~~~h~~~~~~~-------------~~GeN~~~~~~~~~~~  124 (195)
                      +.+++.+|.+|..+|++||+||.+|+..|+.||++|+....+.|....+..             .+|||++.+..   ++
T Consensus         2 ~~~~~~iN~~R~~~gl~pl~~~~~l~~~A~~~a~~~~~~~~~~h~~~~~~~~~~~~~~~g~~~~~~~eni~~~~~---~~   78 (122)
T cd05379           2 QEALELINAYRAQNGLPPLTWDPALAAAAQAHARDMAANGYFSHTGPDGSSPFDRARAAGYPYSSAGENIAYGYS---TA   78 (122)
T ss_pred             hHHHHHHHHHHHHcCCCCCccChHHHHHHHHHHHHHHhcCccCCcCCCCCCHHHHHHHcCCCcCccchhhcccCC---CH
Confidence            478999999999999999999999999999999999988889998766531             13999987654   68


Q ss_pred             hhhHHHHHhhhccCCCCCCCCCCCCccchHHHHHHHhcCeEeEEEEEeCCCCEEEEEEc
Q 029298          125 RDAVSVWAGEEKYYTYATNTCQEGQQCGHYTQIVWKNTRRIGCARVVCDSGDVFMTCNY  183 (195)
Q Consensus       125 ~~~v~~W~~e~~~~~~~~~~~~~~~~~~~ftqmiw~~t~~vGCa~~~c~~~~~~~vC~Y  183 (195)
                      .++++.|+++                .+|+.+|+|...+++|||+..+.++.+|+|..|
T Consensus        79 ~~~~~~w~~~----------------~~H~~~ll~~~~~~~Gvg~~~~~~~~~y~~~~f  121 (122)
T cd05379          79 EAAVDGWMNS----------------PGHRANILNPDYTEVGVGVAYGGDGGYYWVQVF  121 (122)
T ss_pred             HHHHHHHhCC----------------HhHHHHHcCCCcceeeEEEEeCCCCCeEEEEec
Confidence            9999999855                379999999999999999999987888888876

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. Little is known about the biological roles of the bacterial and archaeal SCP domains.

>COG2340 Uncharacterized protein with SCP/PR1 domains [Function unknown]

Probab=99.60  E-value=6.8e-15  Score=113.24  Aligned_cols=106  Identities=26%  Similarity=0.306  Sum_probs=90.4

Q ss_pred             cCChHHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHhhhcCCcCCCCCCCC------------C-ccceEEEEe
Q 029298           51 WGCIGEALQFLFDHNLVRAMKWELPLMWDYDLEKYARWWANQRKADCKLQHSFPEDN------------F-KLGENIFWG  117 (195)
Q Consensus        51 ~~~~~~~~~iL~~hN~~R~~~~~~~L~wd~~La~~A~~~a~~~~~~c~~~h~~~~~~------------~-~~GeN~~~~  117 (195)
                      ....++...+++.+|++|..+++++|.||.+|+..|+.|+++|+....++|..+.+.            . .+||||+.+
T Consensus        75 ~~~~~~~~~~~~~~N~~R~~~~l~~L~~n~~L~~~A~~~a~~m~~~g~~sH~~~~g~~~~~r~~~~g~~~~~agENIa~g  154 (207)
T COG2340          75 STLAQFEKAVVAETNQERAKHGLPPLAWNATLAKAARNHARDMAKNGYFSHTSPTGETPADRLKKYGISGATAGENIAYG  154 (207)
T ss_pred             cccchhHHHHHHHHHHHHhhcCCCCcccCHHHHHHHHHHHHHHHHcCCccccCCCCCCHHHHHHhCCcccccccceeecC
Confidence            335578889999999999999999999999999999999999999999999987432            1 379999988


Q ss_pred             eCCCCChhhhHHHHHhhhccCCCCCCCCCCCCccchHHHHHHHhcCeEeEEEEEeCC
Q 029298          118 SGSTWTPRDAVSVWAGEEKYYTYATNTCQEGQQCGHYTQIVWKNTRRIGCARVVCDS  174 (195)
Q Consensus       118 ~~~~~~~~~~v~~W~~e~~~~~~~~~~~~~~~~~~~ftqmiw~~t~~vGCa~~~c~~  174 (195)
                      +.+  .++.+|+.|++..                ||-.+|+..+.+.+|.|+..-.+
T Consensus       155 ~~~--~~~~~v~~Wl~S~----------------gH~~nll~~~~~~~Gv~~~~~~~  193 (207)
T COG2340         155 SND--PPEAAVDGWLNSP----------------GHRKNLLNPAYTEIGVGVAYDAS  193 (207)
T ss_pred             CCC--chHHHHHHhcCCh----------------hhhhhccCcchhheeEEEEecCC
Confidence            653  2279999998544                79999999999999999997543

>PF11054 Surface_antigen: Sporozoite TA4 surface antigen; InterPro: IPR021288 This family of proteins is a Eukaryotic family of surface antigens

Probab=86.92  E-value=8.4  Score=30.31  Aligned_cols=133  Identities=17%  Similarity=0.250  Sum_probs=73.3

Q ss_pred             HHHHHHHHHHHHhhCCCCCCC-----------c-hHHHHHHHHHHHHHhhhcCCcCCCCC-C--------CCCccceEEE
Q 029298           57 ALQFLFDHNLVRAMKWELPLM-----------W-DYDLEKYARWWANQRKADCKLQHSFP-E--------DNFKLGENIF  115 (195)
Q Consensus        57 ~~~iL~~hN~~R~~~~~~~L~-----------w-d~~La~~A~~~a~~~~~~c~~~h~~~-~--------~~~~~GeN~~  115 (195)
                      .-++|+.+|..|...|++...           . +++| .....|.+    -|..-.... .        ..+.-| +.+
T Consensus        35 ~~~CL~E~NaaReAAGL~~F~~A~~~~~~Lp~~~~~e~-~~~t~W~~----iC~~l~pt~~~~~~~~~~~~pf~~G-TyA  108 (254)
T PF11054_consen   35 SVECLSEMNAAREAAGLANFTEATSDDQKLPEPGSEEL-TDDTLWKK----ICEHLIPTQAEPAAEASKLNPFKDG-TYA  108 (254)
T ss_pred             chhHHHHHHHHHHhcCchhhHhhcCCcccCCCCCchhc-cchhhHHH----HHHHhcCCCCcchhhccccCcCCCC-ceE
Confidence            349999999999998864211           1 2333 33345555    454322110 0        011112 222


Q ss_pred             E--eeCCCCChhhhHHHHHhhhccCCCCCCCCC------CCCccchHHHHHHHhcCe-EeEEEEEeCCC-----------
Q 029298          116 W--GSGSTWTPRDAVSVWAGEEKYYTYATNTCQ------EGQQCGHYTQIVWKNTRR-IGCARVVCDSG-----------  175 (195)
Q Consensus       116 ~--~~~~~~~~~~~v~~W~~e~~~~~~~~~~~~------~~~~~~~ftqmiw~~t~~-vGCa~~~c~~~-----------  175 (195)
                      .  ..+...+..+.|+.|-...++++--.++..      ++.+--.|.-|-+.+..- .-|.+..|...           
T Consensus       109 f~~lt~~~~dCk~aVdYWKaafknF~glPPs~~~~~~lYndqdnVSFVALYNPs~~atAdC~vvTCt~tt~~~~~~~~~~  188 (254)
T PF11054_consen  109 FKSLTDEKPDCKEAVDYWKAAFKNFTGLPPSKTAANKLYNDQDNVSFVALYNPSSSATADCRVVTCTQTTSNTAGGSRLQ  188 (254)
T ss_pred             eeeccCCCCChHHHHHHHHHHHhhcCCCCCChhhccccccCCcceeEEEEeCCCCCCcceeEEEeCCCCCccCCCccccc
Confidence            2  223456799999999988888875433322      122122444444444443 46888888631           


Q ss_pred             ---------CEEEEEEccCCCC-CCCCCCC
Q 029298          176 ---------DVFMTCNYDPVGN-YVGERPY  195 (195)
Q Consensus       176 ---------~~~~vC~Y~p~gn-~~g~~~Y  195 (195)
                               ++-++|.-.|..- ..|..|+
T Consensus       189 ~d~~~~~~~gyAliCkT~P~Al~~~~saPF  218 (254)
T PF11054_consen  189 GDSDSESKTGYALICKTMPAALASDGSAPF  218 (254)
T ss_pred             CCCcccccceEEEEEecCchhhcCCCCCCC
Confidence                     2478999888654 4555553

One of the better characterised members of the family is the sporulated TA4 antigen. The TA4 gene encodes a single polypeptide of 25 kDa which contains a 17 and a 8kDa polypeptide [].

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	195
1cfe_A	135	P14a, Nmr, 20 Structures Length = 135		4e-29
3q2r_A	205	Crystal Structure Of Sglipr1 Soaked With Zinc Chlor		2e-12
2dda_A	211	Crystal Structure Of Pseudechetoxin From Pseudechis		5e-12
2ddb_A	210	Crystal Structure Of Pseudecin From Pseudechis Porp		1e-11
1xta_A	221	Crystal Structure Of Natrin, A Snake Venom Crisp Fr		2e-11
1smb_A	154	Crystal Structure Of Golgi-Associated Pr-1 Protein		4e-11
1xx5_A	221	Crystal Structure Of Natrin From Naja Atra Snake Ve		4e-11
2vzn_A	218	Crystal Structure Of The Major Allergen From Fire A		5e-11
4aiw_A	154	Gapr-1 With Bound Inositol Hexakisphosphate Length		6e-11
3nt8_A	424	Crystal Structure Of Na-Asp-1 Length = 424		2e-10
1u53_A	196	Novel X-Ray Structure Of Na-Asp-2, A Pr-1 Protein F		3e-10
1wvr_A	221	Crystal Structure Of A Crisp Family Ca-Channel Bloc		7e-10
1rc9_A	221	Crystal Structure Of Stecrisp, A Member Of Crisp Fa		1e-09
1qnx_A	209	Ves V 5, An Allergen From Vespula Vulgaris Venom Le		8e-09

>pdb|1CFE|A Chain A, P14a, Nmr, 20 Structures Length = 135

Iteration: 1
 Score =  124 bits (310), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 60/135 (44%), Positives = 81/135 (60%), Gaps = 7/135 (5%)
Query: 60  FLFDHNLVRAMKWELPLMWDYDLEKYARWWANQRKADCKLQHSFPEDNFKLGENIFWGSG 119
           +L  HN  RA     P+ WD +L   A+ +AN R  DC L HS   +N   G       G
Sbjct: 7   YLAVHNDARAQVGVGPMSWDANLASRAQNYANSRAGDCNLIHSGAGENLAKG-------G 59
Query: 120 STWTPRDAVSVWAGEEKYYTYATNTCQEGQQCGHYTQIVWKNTRRIGCARVVCDSGDVFM 179
             +T R AV +W  E   Y YATN C  G++C HYTQ+VW+N+ R+GC R  C++G  F+
Sbjct: 60  GDFTGRAAVQLWVSERPSYNYATNQCVGGKKCRHYTQVVWRNSVRLGCGRARCNNGWWFI 119
Query: 180 TCNYDPVGNYVGERP 194
           +CNYDPVGN++G+RP
Sbjct: 120 SCNYDPVGNWIGQRP 134

>pdb|3Q2R|A Chain A, Crystal Structure Of Sglipr1 Soaked With Zinc Chloride Length = 205

Iteration: 1
 Score = 68.6 bits (166), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 61/128 (47%), Gaps = 14/128 (10%)
Query: 74  LPLMWDYDLEKYARWWANQ----RKADCKLQHSFPEDNFKLGENIFWGSGSTWTPRDAVS 129
           L + WD  L + A+ WA+          K  H    +   LGENI+ GS   ++   A++
Sbjct: 41  LYMTWDPALAQIAKAWASNCQFSHNTRLKPPHKLHPNFTSLGENIWTGSVPIFSVSSAIT 100
Query: 130 VWAGEEKYYTYATNTCQEGQQCGHYTQIVWKNTRRIGCARVVCD--------SGDVFMTC 181
            W  E + Y + T  C+  + CGHYTQ+VW ++ ++GCA   C         S      C
Sbjct: 101 NWYDEIQDYDFKTRICK--KVCGHYTQVVWADSYKVGCAVQFCPKVSGFDALSNGAHFIC 158
Query: 182 NYDPVGNY 189
           NY P GNY
Sbjct: 159 NYGPGGNY 166

>pdb|2DDA|A Chain A, Crystal Structure Of Pseudechetoxin From Pseudechis Australis Length = 211

Iteration: 1
 Score = 67.4 bits (163), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 45/144 (31%), Positives = 59/144 (40%), Gaps = 16/144 (11%)
Query: 59  QFLFDHNLVR-----AMKWELPLMWDYDLEKYARWWANQRKADCKLQHSFPED----NFK 109
           + +  HN +R       +  L + W+    + A+ WAN+    C   HS P        +
Sbjct: 9   EIVDKHNALRRSVKPTARNMLQMKWNSRAAQNAKRWANR----CTFAHSPPNKRTVGKLR 64
Query: 110 LGENIFWGSGS-TWTPRDAVSVWAGEEKYYTYATNTCQEGQQCGHYTQIVWKNTRRIGCA 168
            GENIF  S    W+    V  W  E K + Y       G   GHYTQ+VW  +  IGCA
Sbjct: 65  CGENIFMSSQPFPWS--GVVQAWYDEIKNFVYGIGAKPPGSVIGHYTQVVWYKSYLIGCA 122
Query: 169 RVVCDSGDVFMTCNYDPVGNYVGE 192
              C S      C Y P GN  G 
Sbjct: 123 SAKCSSSKYLYVCQYCPAGNIRGS 146

>pdb|2DDB|A Chain A, Crystal Structure Of Pseudecin From Pseudechis Porphyriacus Length = 210

Iteration: 1
 Score = 66.2 bits (160), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 59/144 (40%), Gaps = 16/144 (11%)
Query: 59  QFLFDHNLVR-----AMKWELPLMWDYDLEKYARWWANQRKADCKLQHSFPE----DNFK 109
           + +  HN +R       +  L + W+    + A+ WA++    C   HS P        +
Sbjct: 8   EIVDKHNALRRSVKPTARNMLQMKWNSHAAQNAKRWADR----CTFAHSPPNTRTVGKLR 63
Query: 110 LGENIFWGSGS-TWTPRDAVSVWAGEEKYYTYATNTCQEGQQCGHYTQIVWKNTRRIGCA 168
            GENIF  S    W+    V  W  E K + Y       G   GHYTQ+VW  +  IGCA
Sbjct: 64  CGENIFMSSQPFPWS--GVVQAWYDEIKNFVYGIGAKPPGSVIGHYTQVVWYKSHLIGCA 121
Query: 169 RVVCDSGDVFMTCNYDPVGNYVGE 192
              C S      C Y P GN  G 
Sbjct: 122 SAKCSSSKYLYVCQYCPAGNIRGS 145

>pdb|1XTA|A Chain A, Crystal Structure Of Natrin, A Snake Venom Crisp From Taiwan Cobra (Naja Atra) Length = 221

Iteration: 1
 Score = 65.5 bits (158), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/128 (35%), Positives = 59/128 (46%), Gaps = 17/128 (13%)
Query: 74  LPLMWDYDLEKYARWWANQRKADCKLQHSFPEDNFKL------GENIFWGSGS-TWTPRD 126
           L + W  +    A  WAN     C L HS   DN ++      GE+I+  S + TWT  +
Sbjct: 37  LKMEWYPEAASNAERWANT----CSLNHS--PDNLRVLEGIQCGESIYMSSNARTWT--E 88
Query: 127 AVSVWAGEEKYYTYATNTCQEGQQCGHYTQIVWKNTRRIGCARVVCDSG--DVFMTCNYD 184
            + +W  E K + Y       G   GHYTQIVW  T R GCA   C S     F  C Y 
Sbjct: 89  IIHLWHDEYKNFVYGVGASPPGSVTGHYTQIVWYQTYRAGCAVSYCPSSAWSYFYVCQYC 148
Query: 185 PVGNYVGE 192
           P GN+ G+
Sbjct: 149 PSGNFQGK 156

>pdb|1SMB|A Chain A, Crystal Structure Of Golgi-Associated Pr-1 Protein Length = 154

Iteration: 1
 Score = 64.7 bits (156), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 59/134 (44%), Gaps = 3/134 (2%)
Query: 59  QFLFDHNLVRAMKWELPLMWDYDLEKYARWWANQRKADCKLQHSFPEDNFKLGENIFWGS 118
           + L  HN  R      PL    +L + A+ ++    +   L+HS      + GEN+ W S
Sbjct: 12  EVLKAHNEYRQKHGVPPLKLXKNLNREAQQYSEALASTRILKHSPESSRGQXGENLAWAS 71
Query: 119 GSTWTPRDAVSVWAGEEKYYTYATNTCQEGQQCGHYTQIVWKNTRRIGCARVVCDSGDVF 178
               T ++    W  E K Y +       G   GH+T +VWKNT+++G  +     G  F
Sbjct: 72  -YDQTGKEVADRWYSEIKNYNFQQPGFTSG--TGHFTAMVWKNTKKMGVGKASASDGSSF 128
Query: 179 MTCNYDPVGNYVGE 192
           +   Y P GN V E
Sbjct: 129 VVARYFPAGNVVNE 142

>pdb|1XX5|A Chain A, Crystal Structure Of Natrin From Naja Atra Snake Venom Length = 221

Iteration: 1
 Score = 64.3 bits (155), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 46/128 (35%), Positives = 59/128 (46%), Gaps = 17/128 (13%)
Query: 74  LPLMWDYDLEKYARWWANQRKADCKLQHSFPEDNFKL------GENIFWGSGS-TWTPRD 126
           L + W  +    A  WAN     C L HS   DN ++      GE+I+  S + TWT  +
Sbjct: 37  LKMEWYPEAASNAERWANT----CSLNHS--PDNLRVLEGIQCGESIYMSSNARTWT--E 88
Query: 127 AVSVWAGEEKYYTYATNTCQEGQQCGHYTQIVWKNTRRIGCARVVCDSG--DVFMTCNYD 184
            + +W  E K + Y       G   GHYTQIVW  T R GCA   C S     F  C Y 
Sbjct: 89  IIHLWHDEYKNFVYGVGANPPGSVTGHYTQIVWYQTYRAGCAVSYCPSSAWSYFYVCQYC 148
Query: 185 PVGNYVGE 192
           P GN+ G+
Sbjct: 149 PSGNFQGK 156

>pdb|2VZN|A Chain A, Crystal Structure Of The Major Allergen From Fire Ant Venom, Sol I 3 Length = 218

Iteration: 1
 Score = 63.9 bits (154), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 44/134 (32%), Positives = 63/134 (47%), Gaps = 18/134 (13%)
Query: 76  LMWDYDLEKYARWWANQRKADCKLQHSFPE--DNFKLGENIFWGSGS---TWTPRDAVSV 130
           L WD +L   A+ WANQ    C  +H      + F +G+NI   S S     TP + + +
Sbjct: 79  LTWDPELATIAQRWANQ----CTFEHDACRNVERFAVGQNIAATSSSGKNKSTPNEMILL 134
Query: 131 WAGEEKYY-----TYATNTCQEGQQCGHYTQIVWKNTRRIGCARVVCDSGDV----FMTC 181
           W  E K +     +   +      + GHYTQIVW  T +IGC R++    D     ++ C
Sbjct: 135 WYNEVKDFDNRWISSFPSDDNILMKVGHYTQIVWAKTTKIGCGRIMFKEPDNWTKHYLVC 194
Query: 182 NYDPVGNYVGERPY 195
           NY P GN +G   Y
Sbjct: 195 NYGPAGNVLGAPIY 208

>pdb|4AIW|A Chain A, Gapr-1 With Bound Inositol Hexakisphosphate Length = 154

Iteration: 1
 Score = 63.9 bits (154), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 59/134 (44%), Gaps = 3/134 (2%)
Query: 59  QFLFDHNLVRAMKWELPLMWDYDLEKYARWWANQRKADCKLQHSFPEDNFKLGENIFWGS 118
           + L  HN  R      PL    +L + A+ ++    +   L+HS      + GEN+ W S
Sbjct: 12  EVLKAHNEYRQKHGVPPLKLXKNLNREAQQYSEALASTRILKHSPESSRGQCGENLAWAS 71
Query: 119 GSTWTPRDAVSVWAGEEKYYTYATNTCQEGQQCGHYTQIVWKNTRRIGCARVVCDSGDVF 178
               T ++    W  E K Y +       G   GH+T +VWKNT+++G  +     G  F
Sbjct: 72  -YDQTGKEVADRWYSEIKNYNFQQPGFTSG--TGHFTAMVWKNTKKMGVGKASASDGSSF 128
Query: 179 MTCNYDPVGNYVGE 192
           +   Y P GN V E
Sbjct: 129 VVARYFPAGNVVNE 142

>pdb|3NT8|A Chain A, Crystal Structure Of Na-Asp-1 Length = 424

Iteration: 1
 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/142 (33%), Positives = 64/142 (45%), Gaps = 17/142 (11%)
Query: 65  NLVRAMKWELPLMWDYDLEKYARWWANQRKADCKLQHSFPEDNFKLGENIFWGS----GS 120
           N  +A K  L +++D ++E  A    N+    C  QHS  ED   LGENI+  S      
Sbjct: 264 NAPKAAKM-LKMVYDCEVEASAIRHGNK----CVYQHSHGEDRPGLGENIYKTSVLKFDK 318
Query: 121 TWTPRDAVSVWAGEEKYYTYATNTC-------QEGQQCGHYTQIVWKNTRRIGCARVVCD 173
               + A  +W  E K Y    +         +   Q GHYTQ+ W  T ++GCA V C+
Sbjct: 319 NKAAKQASQLWWNELKEYGVGPSNVLTTALWNRPNMQIGHYTQMAWDTTYKLGCAVVFCN 378
Query: 174 SGDVFMTCNYDPVGNYVGERPY 195
               F  C Y P GNY+G   Y
Sbjct: 379 D-FTFGVCQYGPGGNYMGHVIY 399

>pdb|1U53|A Chain A, Novel X-Ray Structure Of Na-Asp-2, A Pr-1 Protein From The Nematode Parasite Necator Americanus And A Vaccine Antigen For Human Hookworm Infection Length = 196

Iteration: 1
 Score = 61.6 bits (148), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 62/139 (44%), Gaps = 14/139 (10%)
Query: 65  NLVRAMKWELPLMWDYDLEKYARWWANQRKADCKLQHSFPEDNFKLGENIFWGSGSTW-- 122
           N  +A K +  + +D ++EK A   A Q    C  +HS P     LGENIF  S S    
Sbjct: 43  NAPKAAKMKT-MAYDCEVEKTAMNNAKQ----CVFKHSQPNQRKGLGENIFMSSDSGMDK 97
Query: 123 --TPRDAVSVWAGEEKYYTYATNTCQEG----QQCGHYTQIVWKNTRRIGCARVVCDSGD 176
                 A   W GE        N    G    +  GHYTQ+VW+ T ++GC    C S  
Sbjct: 98  AKAAEQASKAWFGELAEKGVGQNLKLTGGLFSRGVGHYTQMVWQETVKLGCYVEAC-SNM 156
Query: 177 VFMTCNYDPVGNYVGERPY 195
            ++ C Y P GN +G+  Y
Sbjct: 157 CYVVCQYGPAGNMMGKDIY 175

>pdb|1WVR|A Chain A, Crystal Structure Of A Crisp Family Ca-Channel Blocker Derived From Snake Venom Length = 221

Iteration: 1
 Score = 60.1 bits (144), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 34/88 (38%), Positives = 42/88 (47%), Gaps = 5/88 (5%)
Query: 108 FKLGENIFWGS-GSTWTPRDAVSVWAGEEKYYTYATNTCQEGQQCGHYTQIVWKNTRRIG 166
            K GENI+  +  + WT  D +  W GE K + Y           GHYTQIVW  + R G
Sbjct: 71  IKCGENIYMATYPAKWT--DIIHAWHGEYKDFKYGVGAVPSDAVIGHYTQIVWYKSYRAG 128
Query: 167 CARVVCDSG--DVFMTCNYDPVGNYVGE 192
           CA   C S     F  C Y P GN +G+
Sbjct: 129 CAAAYCPSSKYSYFYVCQYCPAGNIIGK 156

>pdb|1RC9|A Chain A, Crystal Structure Of Stecrisp, A Member Of Crisp Family From Trimeresurus Stejnegeri Refined At 1.6 Angstroms Resolution: Structual Relationship Of The Two Domains Length = 221

Iteration: 1
 Score = 59.3 bits (142), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 34/90 (37%), Positives = 42/90 (46%), Gaps = 5/90 (5%)
Query: 106 DNFKLGENIFWGS-GSTWTPRDAVSVWAGEEKYYTYATNTCQEGQQCGHYTQIVWKNTRR 164
           +  K GENI+       WT  D +  W  E K + Y           GHYTQIVW  + R
Sbjct: 69  EGIKCGENIYMSPYPMKWT--DIIHAWHDEYKDFKYGVGADPPNAVTGHYTQIVWYKSYR 126
Query: 165 IGCARVVCDSG--DVFMTCNYDPVGNYVGE 192
           IGCA   C S     F  C Y P GN++G+
Sbjct: 127 IGCAAAYCPSSPYSYFFVCQYCPAGNFIGK 156

>pdb|1QNX|A Chain A, Ves V 5, An Allergen From Vespula Vulgaris Venom Length = 209

Iteration: 1
 Score = 56.6 bits (135), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 41/130 (31%), Positives = 63/130 (48%), Gaps = 15/130 (11%)
Query: 76  LMWDYDLEKYARWWANQRKADCKLQHSFPED--NFKLGENIFWGSGSTWT----PRDAVS 129
           L+W+ +L   A+ WANQ    C+  H    D   +++G+N+   +GST      P   V 
Sbjct: 82  LVWNDELAYVAQVWANQ----CQYGHDTCRDVAKYQVGQNVAL-TGSTAAKYDDPVKLVK 136
Query: 130 VWAGEEKYYTYATN-TCQEGQQCGHYTQIVWKNTRRIGCARVVCDS---GDVFMTCNYDP 185
           +W  E K Y      +  +  + GHYTQ+VW NT+ +GC  +          ++ CNY P
Sbjct: 137 MWEDEVKDYNPKKKFSGNDFLKTGHYTQMVWANTKEVGCGSIKYIQEKWHKHYLVCNYGP 196
Query: 186 VGNYVGERPY 195
            GN+  E  Y
Sbjct: 197 SGNFKNEELY 206

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	195
1cfe_A	135	Pathogenesis-related protein P14A; PR-1 proteins,	1e-60
4aiw_A	154	Golgi-associated plant pathogenesis-related prote;	7e-59
1u53_A	196	Secreted protein Asp-2; antibiotic; 1.56A {Necator	5e-46
1qnx_A	209	VES V 5, antigen 5; allergen, vespid venom; 1.90A	9e-46
2ddb_A	210	Pseudecin, channel blocker; crisp, snake venom, CN	2e-45
3q2u_A	205	Glioma pathogenesis-related protein 1; crisp, memb	2e-45
2vzn_A	218	Venom allergen 3; major FIRE ANT allergen, SOL I 3	3e-44
1xta_A	221	Natrin 1; crisp, serine protease, ION channel bloc	3e-44
3nt8_A	424	Ancylostoma secreted protein 1; pathogenesis relat	2e-41
3nt8_A	424	Ancylostoma secreted protein 1; pathogenesis relat	3e-35
3u3l_C	233	Tablysin 15; CAP domain, alphavbeta3 integrin, sal	9e-26
3s6s_A	206	AC-Asp-7; pathogenesis-related protein, SCP/TAPS,	1e-15

>1cfe_A Pathogenesis-related protein P14A; PR-1 proteins, plant defense; NMR {Solanum lycopersicum} SCOP: d.111.1.1 Length = 135

 Score =  184 bits (470), Expect = 1e-60
 Identities = 63/137 (45%), Positives = 84/137 (61%), Gaps = 7/137 (5%)

Query: 59  QFLFDHNLVRAMKWELPLMWDYDLEKYARWWANQRKADCKLQHSFPEDNFKLGENIFWGS 118
            +L  HN  RA     P+ WD +L   A+ +AN R  DC L HS        GEN+  G 
Sbjct: 6   DYLAVHNDARAQVGVGPMSWDANLASRAQNYANSRAGDCNLIHS------GAGENLAKGG 59

Query: 119 GSTWTPRDAVSVWAGEEKYYTYATNTCQEGQQCGHYTQIVWKNTRRIGCARVVCDSGDVF 178
           G  +T R AV +W  E   Y YATN C  G++C HYTQ+VW+N+ R+GC R  C++G  F
Sbjct: 60  GD-FTGRAAVQLWVSERPSYNYATNQCVGGKKCRHYTQVVWRNSVRLGCGRARCNNGWWF 118

Query: 179 MTCNYDPVGNYVGERPY 195
           ++CNYDPVGN++G+RPY
Sbjct: 119 ISCNYDPVGNWIGQRPY 135

>4aiw_A Golgi-associated plant pathogenesis-related prote; lipid-binding protein, golgi apparatus, myristate; HET: I6P; 1.50A {Homo sapiens} PDB: 1smb_A* Length = 154

 Score =  180 bits (459), Expect = 7e-59
 Identities = 39/137 (28%), Positives = 60/137 (43%), Gaps = 3/137 (2%)

Query: 59  QFLFDHNLVRAMKWELPLMWDYDLEKYARWWANQRKADCKLQHSFPEDNFKLGENIFWGS 118
           + L  HN  R      PL    +L + A+ ++    +   L+HS      + GEN+ W S
Sbjct: 12  EVLKAHNEYRQKHGVPPLKLCKNLNREAQQYSEALASTRILKHSPESSRGQCGENLAWAS 71

Query: 119 GSTWTPRDAVSVWAGEEKYYTYATNTCQEGQQCGHYTQIVWKNTRRIGCARVVCDSGDVF 178
               T ++    W  E K Y +       G   GH+T +VWKNT+++G  +     G  F
Sbjct: 72  YD-QTGKEVADRWYSEIKNYNFQQPGFTSG--TGHFTAMVWKNTKKMGVGKASASDGSSF 128

Query: 179 MTCNYDPVGNYVGERPY 195
           +   Y P GN V E  +
Sbjct: 129 VVARYFPAGNVVNEGFF 145

>1u53_A Secreted protein Asp-2; antibiotic; 1.56A {Necator americanus} Length = 196

 Score =  149 bits (377), Expect = 5e-46
 Identities = 47/162 (29%), Positives = 64/162 (39%), Gaps = 30/162 (18%)

Query: 59  QFLFDHNLVRAM-----------------KWELPLMWDYDLEKYARWWANQRKADCKLQH 101
           +FL  HN +R+                       + +D ++EK A   A Q    C  +H
Sbjct: 19  KFLEMHNSLRSSVALGQAKDGAGGNAPKAAKMKTMAYDCEVEKTAMNNAKQ----CVFKH 74

Query: 102 SFPEDNFKLGENIFWGSGS----TWTPRDAVSVWAGEEKYYTYATNTC----QEGQQCGH 153
           S P     LGENIF  S S          A   W GE        N         +  GH
Sbjct: 75  SQPNQRKGLGENIFMSSDSGMDKAKAAEQASKAWFGELAEKGVGQNLKLTGGLFSRGVGH 134

Query: 154 YTQIVWKNTRRIGCARVVCDSGDVFMTCNYDPVGNYVGERPY 195
           YTQ+VW+ T ++GC    C S   ++ C Y P GN +G+  Y
Sbjct: 135 YTQMVWQETVKLGCYVEAC-SNMCYVVCQYGPAGNMMGKDIY 175

>1qnx_A VES V 5, antigen 5; allergen, vespid venom; 1.90A {Vespula vulgaris} SCOP: d.111.1.1 Length = 209

 Score =  149 bits (377), Expect = 9e-46
 Identities = 37/131 (28%), Positives = 58/131 (44%), Gaps = 13/131 (9%)

Query: 74  LPLMWDYDLEKYARWWANQRKADCKLQHSFPE--DNFKLGENIFWGSGS---TWTPRDAV 128
             L+W+ +L   A+ WANQ    C+  H        +++G+N+     +      P   V
Sbjct: 80  KNLVWNDELAYVAQVWANQ----CQYGHDTCRDVAKYQVGQNVALTGSTAAKYDDPVKLV 135

Query: 129 SVWAGEEKYYTYATNTC-QEGQQCGHYTQIVWKNTRRIGCARVVCDSGD---VFMTCNYD 184
            +W  E K Y         +  + GHYTQ+VW NT+ +GC  +          ++ CNY 
Sbjct: 136 KMWEDEVKDYNPKKKFSGNDFLKTGHYTQMVWANTKEVGCGSIKYIQEKWHKHYLVCNYG 195

Query: 185 PVGNYVGERPY 195
           P GN+  E  Y
Sbjct: 196 PSGNFKNEELY 206

>2ddb_A Pseudecin, channel blocker; crisp, snake venom, CNG channel, toxin; 1.90A {Pseudechis porphyriacus} PDB: 2epf_A 2dda_A Length = 210

 Score =  148 bits (375), Expect = 2e-45
 Identities = 45/148 (30%), Positives = 60/148 (40%), Gaps = 16/148 (10%)

Query: 59  QFLFDHNLVRAM-----KWELPLMWDYDLEKYARWWANQRKADCKLQHSFPED----NFK 109
           + +  HN +R       +  L + W+    + A+ WA++    C   HS P        +
Sbjct: 8   EIVDKHNALRRSVKPTARNMLQMKWNSHAAQNAKRWADR----CTFAHSPPNTRTVGKLR 63

Query: 110 LGENIFWGSGSTWTPRDAVSVWAGEEKYYTYATNTCQEGQQCGHYTQIVWKNTRRIGCAR 169
            GENIF  S   +     V  W  E K + Y       G   GHYTQ+VW  +  IGCA 
Sbjct: 64  CGENIFMSSQP-FPWSGVVQAWYDEIKNFVYGIGAKPPGSVIGHYTQVVWYKSHLIGCAS 122

Query: 170 VVCDSGDVFMTCNYDPVGNYVGE--RPY 195
             C S      C Y P GN  G    PY
Sbjct: 123 AKCSSSKYLYVCQYCPAGNIRGSIATPY 150

>3q2u_A Glioma pathogenesis-related protein 1; crisp, membrane protein; 1.85A {Homo sapiens} PDB: 3q2r_A Length = 205

 Score =  148 bits (374), Expect = 2e-45
 Identities = 46/158 (29%), Positives = 68/158 (43%), Gaps = 28/158 (17%)

Query: 59  QFLFDHNLVRAM-----KWELPLMWDYDLEKYARWWANQRKADCKLQHS--------FPE 105
             +  HN  R+         L + WD  L + A+ WA+     C+  H+           
Sbjct: 21  DCVRIHNKFRSEVKPTASDMLYMTWDPALAQIAKAWASN----CQFSHNTRLKPPHKLHP 76

Query: 106 DNFKLGENIFWGSGSTWTPRDAVSVWAGEEKYYTYATNTCQEGQQCGHYTQIVWKNTRRI 165
           +   LGENI+ GS   ++   A++ W  E + Y + T  C   + CGHYTQ+VW ++ ++
Sbjct: 77  NFTSLGENIWTGSVPIFSVSSAITNWYDEIQDYDFKTRIC--KKVCGHYTQVVWADSYKV 134

Query: 166 GCARVVCDSGD--------VFMTCNYDPVGNYVGERPY 195
           GCA   C                CNY P GNY    PY
Sbjct: 135 GCAVQFCPKVSGFDALSNGAHFICNYGPGGNY-PTWPY 171

>2vzn_A Venom allergen 3; major FIRE ANT allergen, SOL I 3, secreted, cross- reactivity; 3.05A {Solenopsis invicta} Length = 218

 Score =  145 bits (367), Expect = 3e-44
 Identities = 44/136 (32%), Positives = 62/136 (45%), Gaps = 18/136 (13%)

Query: 74  LPLMWDYDLEKYARWWANQRKADCKLQHSFPE--DNFKLGENIFWGSGS---TWTPRDAV 128
             L WD +L   A+ WANQ    C  +H      + F +G+NI   S S     TP + +
Sbjct: 77  PNLTWDPELATIAQRWANQ----CTFEHDACRNVERFAVGQNIAATSSSGKNKSTPNEMI 132

Query: 129 SVWAGEEKYYTYATNTC-----QEGQQCGHYTQIVWKNTRRIGCARVVCDSGD----VFM 179
            +W  E K +     +          + GHYTQIVW  T +IGC R++    D     ++
Sbjct: 133 LLWYNEVKDFDNRWISSFPSDDNILMKVGHYTQIVWAKTTKIGCGRIMFKEPDNWTKHYL 192

Query: 180 TCNYDPVGNYVGERPY 195
            CNY P GN +G   Y
Sbjct: 193 VCNYGPAGNVLGAPIY 208

>1xta_A Natrin 1; crisp, serine protease, ION channel blocking, cobra, toxin; 1.58A {Naja atra} PDB: 2giz_A 1xx5_A 3mz8_A 1rc9_A 1wvr_A Length = 221

 Score =  145 bits (368), Expect = 3e-44
 Identities = 47/150 (31%), Positives = 62/150 (41%), Gaps = 18/150 (12%)

Query: 59  QFLFDHNLVRAM-----KWELPLMWDYDLEKYARWWANQRKADCKLQHSFPED----NFK 109
           + +  HN +R          L + W  +    A  WAN     C L HS          +
Sbjct: 17  EIVDLHNSLRRRVSPTASNMLKMEWYPEAASNAERWANT----CSLNHSPDNLRVLEGIQ 72

Query: 110 LGENIFWGSGSTWTPRDAVSVWAGEEKYYTYATNTCQEGQQCGHYTQIVWKNTRRIGCAR 169
            GE+I+  S +  T  + + +W  E K + Y       G   GHYTQIVW  T R GCA 
Sbjct: 73  CGESIYMSSNA-RTWTEIIHLWHDEYKNFVYGVGASPPGSVTGHYTQIVWYQTYRAGCAV 131

Query: 170 VVCDSGD--VFMTCNYDPVGNYVGE--RPY 195
             C S     F  C Y P GN+ G+   PY
Sbjct: 132 SYCPSSAWSYFYVCQYCPSGNFQGKTATPY 161

>3nt8_A Ancylostoma secreted protein 1; pathogenesis related-1 protein, cysteine-rich secretory PROT domain, immune system; 2.20A {Necator americanus} Length = 424

 Score =  143 bits (362), Expect = 2e-41
 Identities = 44/133 (33%), Positives = 61/133 (45%), Gaps = 16/133 (12%)

Query: 74  LPLMWDYDLEKYARWWANQRKADCKLQHSFPEDNFKLGENIFWGSGSTWT----PRDAVS 129
           L +++D ++E  A    N+    C  QHS  ED   LGENI+  S   +      + A  
Sbjct: 272 LKMVYDCEVEASAIRHGNK----CVYQHSHGEDRPGLGENIYKTSVLKFDKNKAAKQASQ 327

Query: 130 VWAGEEKYYTYATNTC-------QEGQQCGHYTQIVWKNTRRIGCARVVCDSGDVFMTCN 182
           +W  E K Y    +         +   Q GHYTQ+ W  T ++GCA V C+    F  C 
Sbjct: 328 LWWNELKEYGVGPSNVLTTALWNRPNMQIGHYTQMAWDTTYKLGCAVVFCNDF-TFGVCQ 386

Query: 183 YDPVGNYVGERPY 195
           Y P GNY+G   Y
Sbjct: 387 YGPGGNYMGHVIY 399

>3nt8_A Ancylostoma secreted protein 1; pathogenesis related-1 protein, cysteine-rich secretory PROT domain, immune system; 2.20A {Necator americanus} Length = 424

 Score =  127 bits (319), Expect = 3e-35
 Identities = 24/128 (18%), Positives = 44/128 (34%), Gaps = 14/128 (10%)

Query: 74  LPLMWDYDLEKYARWWANQRKADCKLQHSFPEDNFKLGENIFWGSGSTWTP------RDA 127
             L WD  +E+  +         C    +       + +N    S S   P         
Sbjct: 70  YKLSWDCAMEQQLQDAIQS----CPSGFA---GIQGVAQNTMSWSSSGGYPDPSVKIEPT 122

Query: 128 VSVWAGEEKYYTYATNTCQEGQQCGHYTQIVWKNTRRIGCARVVCDSGDVFMTCNYDPVG 187
           +S W    K      +    G     ++ +V+  T ++GCA  VC    + ++C Y+ VG
Sbjct: 123 LSGWWSGAKKNGVGPDNKYTGGGLFAFSNMVYSETTKLGCAYKVC-GTKLAVSCIYNGVG 181

Query: 188 NYVGERPY 195
               +  +
Sbjct: 182 YITNQPMW 189

>3u3l_C Tablysin 15; CAP domain, alphavbeta3 integrin, salivary gland, protein BI; HET: PLM CIT; 1.57A {Tabanus yao} PDB: 3u3n_C* 3u3u_C* Length = 233

 Score = 98.2 bits (244), Expect = 9e-26
 Identities = 29/163 (17%), Positives = 45/163 (27%), Gaps = 31/163 (19%)

Query: 59  QFLFDHNLVRAM----KWELP-------LMWDYDLEKYARWWANQRKADCKLQHSFPEDN 107
           + L   N VR       W LP       ++WD +L   A+         C  +     + 
Sbjct: 43  EILSKINDVRDHVAKGSWGLPVAARMKVVVWDAELAGLAKRHTKG----CVGETHACRNT 98

Query: 108 FKL---GENIFWGSGSTWTP-----RDAVSVWAGEEKYYTYAT----NTCQEGQQCGHYT 155
            +    G+  F  SG           DAV     ++   T                    
Sbjct: 99  ERFWLPGQLNFKYSGDKLPRIKELIDDAVKKGHLQKHNITREIIENYRENGPNGDVKELA 158

Query: 156 QIVWKNTRRIGCARVVCDSGD---VFMTCNYDPVGNYVGERPY 195
             +      +GC     + G      +TCN+    N  G   Y
Sbjct: 159 LAISDRVTAVGCGLTTWEDGAKARALLTCNFSS-QNTRGRPVY 200

>3s6s_A AC-Asp-7; pathogenesis-related protein, SCP/TAPS, unknown function; 2.40A {Ancylostoma caninum} PDB: 3s6v_A 3s6u_A Length = 206

 Score = 71.3 bits (174), Expect = 1e-15
 Identities = 18/127 (14%), Positives = 30/127 (23%), Gaps = 29/127 (22%)

Query: 74  LPLMWDYDLEKYARWWANQRKADCKLQHSFPEDNFKLGENIFWGSGSTWTPRDAVSVWAG 133
             L++D  LE+ AR                       G   F G            +   
Sbjct: 48  YGLVYDCGLEEEARKEIKL----PGYAD-----LHHRGVTRFSGDYEGSAISALKEIL-- 96

Query: 134 EEKYYTYATNTCQEGQQCGHYTQIVWKNTRRIGCARVVCDSGD-----VFMTCNYDPVGN 188
            E +                  Q+V+    R GC+  +  +       +   C YD    
Sbjct: 97  -ETFS----------ADKNSMRQVVYPKATRFGCSGRLRRNKKTGMRRMDWVCVYDKKPK 145

Query: 189 YVGERPY 195
                 +
Sbjct: 146 --DGESF 150

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	195
4aiw_A	154	Golgi-associated plant pathogenesis-related prote;	100.0
1cfe_A	135	Pathogenesis-related protein P14A; PR-1 proteins,	100.0
1u53_A	196	Secreted protein Asp-2; antibiotic; 1.56A {Necator	100.0
1qnx_A	209	VES V 5, antigen 5; allergen, vespid venom; 1.90A	100.0
3q2u_A	205	Glioma pathogenesis-related protein 1; crisp, memb	100.0
2ddb_A	210	Pseudecin, channel blocker; crisp, snake venom, CN	100.0
1xta_A	221	Natrin 1; crisp, serine protease, ION channel bloc	100.0
2vzn_A	218	Venom allergen 3; major FIRE ANT allergen, SOL I 3	100.0
3u3l_C	233	Tablysin 15; CAP domain, alphavbeta3 integrin, sal	100.0
3nt8_A	424	Ancylostoma secreted protein 1; pathogenesis relat	100.0
3nt8_A	424	Ancylostoma secreted protein 1; pathogenesis relat	100.0
3s6s_A	206	AC-Asp-7; pathogenesis-related protein, SCP/TAPS,	99.97
4ifa_A	339	Extracellular protein containing A SCP domain; vac	99.81
4h0a_A	323	Uncharacterized protein; CAP protein family, cyste	99.64

>4aiw_A Golgi-associated plant pathogenesis-related prote; lipid-binding protein, golgi apparatus, myristate; HET: I6P; 1.50A {Homo sapiens} PDB: 1smb_A*

Probab=100.00  E-value=1.1e-45  Score=271.34  Aligned_cols=140  Identities=27%  Similarity=0.420  Sum_probs=127.4

Q ss_pred             ChHHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHhhhcCCcCCCCCCCCCccceEEEEeeCCCCChhhhHHHHH
Q 029298           53 CIGEALQFLFDHNLVRAMKWELPLMWDYDLEKYARWWANQRKADCKLQHSFPEDNFKLGENIFWGSGSTWTPRDAVSVWA  132 (195)
Q Consensus        53 ~~~~~~~iL~~hN~~R~~~~~~~L~wd~~La~~A~~~a~~~~~~c~~~h~~~~~~~~~GeN~~~~~~~~~~~~~~v~~W~  132 (195)
                      ..+++++||+.||.+|+.|++++|+||++|++.||.||++++..|.+.|+....+..+||||+++.. ..++.++|+.||
T Consensus         6 ~~~f~~~iL~~HN~~R~~~~~~~L~wd~~La~~Aq~~A~~~a~~~~~~hs~~~~~~~~GeNl~~~~~-~~~~~~~v~~W~   84 (154)
T 4aiw_A            6 SKQFHNEVLKAHNEYRQKHGVPPLKLCKNLNREAQQYSEALASTRILKHSPESSRGQCGENLAWASY-DQTGKEVADRWY   84 (154)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCCCEECHHHHHHHHHHHHHHHHHTCCCCCHHHHTTSSEEEEEEESS-CCCHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHcCCCcccccHHHHHHHHHHHHHhhhcccccccccCCCCCCCeeeEecCC-CCCHHHHHHHHH
Confidence            3468999999999999999999999999999999999999999999999876555678999998754 346889999999


Q ss_pred             hhhccCCCCCCCCCCCCccchHHHHHHHhcCeEeEEEEEeCCCCEEEEEEccCCCCCCCCCCC
Q 029298          133 GEEKYYTYATNTCQEGQQCGHYTQIVWKNTRRIGCARVVCDSGDVFMTCNYDPVGNYVGERPY  195 (195)
Q Consensus       133 ~e~~~~~~~~~~~~~~~~~~~ftqmiw~~t~~vGCa~~~c~~~~~~~vC~Y~p~gn~~g~~~Y  195 (195)
                      +|..+|+|..+.+.  ..+||||||||++|++||||++.|.++.+++||+|+|+||+.|+.+|
T Consensus        85 ~E~~~y~~~~~~~~--~~~gHfTQ~VW~~t~~vGCg~a~c~~~~~~vVC~Y~P~GN~~g~~~y  145 (154)
T 4aiw_A           85 SEIKNYNFQQPGFT--SGTGHFTAMVWKNTKKMGVGKASASDGSSFVVARYFPAGNVVNEGFF  145 (154)
T ss_dssp             GGGGGCCTTSCSCC--TTTHHHHHHHCTTCCEEEEEEEECTTSCEEEEEEEESCCCCCSTTHH
T ss_pred             HHhhhcccCCCCcC--CCcCCeeeeehhhhceeeeEEEEcCCCCEEEEEEEeCCCccCCccch
Confidence            99999999988775  45899999999999999999999999899999999999999998776

>1cfe_A Pathogenesis-related protein P14A; PR-1 proteins, plant defense; NMR {Solanum lycopersicum} SCOP: d.111.1.1

Probab=100.00  E-value=1.5e-45  Score=265.00  Aligned_cols=133  Identities=47%  Similarity=0.903  Sum_probs=124.8

Q ss_pred             HHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHhhhcCCcCCCCCCCCCccceEEEEeeCCCCChhhhHHHHHhhh
Q 029298           56 EALQFLFDHNLVRAMKWELPLMWDYDLEKYARWWANQRKADCKLQHSFPEDNFKLGENIFWGSGSTWTPRDAVSVWAGEE  135 (195)
Q Consensus        56 ~~~~iL~~hN~~R~~~~~~~L~wd~~La~~A~~~a~~~~~~c~~~h~~~~~~~~~GeN~~~~~~~~~~~~~~v~~W~~e~  135 (195)
                      .+++||+.||.+|++++|++|+||++|++.||.||++|+.+|.+.|++     + ||||+++. ...++.++|+.||+|.
T Consensus         3 ~~~~iL~~HN~~R~~~~~~~L~Wd~~La~~Aq~~A~~~a~~c~~~hs~-----~-GENla~~~-~~~~~~~~v~~W~~E~   75 (135)
T 1cfe_A            3 SPQDYLAVHNDARAQVGVGPMSWDANLASRAQNYANSRAGDCNLIHSG-----A-GENLAKGG-GDFTGRAAVQLWVSER   75 (135)
T ss_dssp             SHHHHHHHHHHHHHHTTCCCCEECSHHHHHHHHHHHHHTTTCCSCSCS-----S-SBCCEECS-SSCCHHHHHHHHHTTG
T ss_pred             HHHHHHHHHHHHHHHcCCCccCcCHHHHHHHHHHHHHHhcCCCcccCC-----C-CeEEEEec-CCCCHHHHHHHHHhHH
Confidence            477999999999999999999999999999999999999999999975     2 99999876 4467999999999999


Q ss_pred             ccCCCCCCCCCCCCccchHHHHHHHhcCeEeEEEEEeCCCCEEEEEEccCCCCCCCCCCC
Q 029298          136 KYYTYATNTCQEGQQCGHYTQIVWKNTRRIGCARVVCDSGDVFMTCNYDPVGNYVGERPY  195 (195)
Q Consensus       136 ~~~~~~~~~~~~~~~~~~ftqmiw~~t~~vGCa~~~c~~~~~~~vC~Y~p~gn~~g~~~Y  195 (195)
                      .+|+|..+.+..+..+||||||||+++++||||++.|.++.+++||+|+|+||+.|++||
T Consensus        76 ~~y~~~~~~~~~~~~~gHfTQ~vW~~t~~vGCa~~~c~~~~~~~VC~Y~p~GN~~g~~pY  135 (135)
T 1cfe_A           76 PSYNYATNQCVGGKKCRHYTQVVWRNSVRLGCGRARCNNGWWFISCNYDPVGNWIGQRPY  135 (135)
T ss_dssp             GGEEGGGTEECSSSCCSSHHHHHCTTCCEEEEEEEECTTSSEEEEEECSSCCSCTTSCCC
T ss_pred             hhCCCCCCCcCCCCcccceeeeEEccCcEEeEEEEEeCCCCEEEEEEEeCCCCCCCCCCC
Confidence            999999988877788999999999999999999999988889999999999999999999

>1u53_A Secreted protein Asp-2; antibiotic; 1.56A {Necator americanus}

Probab=100.00  E-value=1.5e-39  Score=247.66  Aligned_cols=140  Identities=31%  Similarity=0.508  Sum_probs=120.1

Q ss_pred             cCChHHHHHHHHHHHHHHhhC-----------------CCCCCCchHHHHHHHHHHHHHhhhcCCcCCCCCCCCCccceE
Q 029298           51 WGCIGEALQFLFDHNLVRAMK-----------------WELPLMWDYDLEKYARWWANQRKADCKLQHSFPEDNFKLGEN  113 (195)
Q Consensus        51 ~~~~~~~~~iL~~hN~~R~~~-----------------~~~~L~wd~~La~~A~~~a~~~~~~c~~~h~~~~~~~~~GeN  113 (195)
                      ....++++.||+.||.+|+++                 +|++|+||++||+.||.||+    +|.+.|+.+..+..+|||
T Consensus        11 ~lt~~~~~~iL~~HN~~R~~~a~G~~~~~~g~~~p~A~nM~~L~Wd~~La~~Aq~~A~----~C~~~h~~~~~~~~~GeN   86 (196)
T 1u53_A           11 GMSEEARQKFLEMHNSLRSSVALGQAKDGAGGNAPKAAKMKTMAYDCEVEKTAMNNAK----QCVFKHSQPNQRKGLGEN   86 (196)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHHTTCCBCTTSSBCCCBSSCBCCEECHHHHHHHHHHHT----TCCCCCCCGGGSTTCEEE
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhCCCcccCCCCcCCccccchhcccCHHHHHHHHHHHH----hCccCCCccccCCCCCeE
Confidence            344568999999999999987                 36699999999999999999    999999865444468999


Q ss_pred             EEEeeCCCCC----hhhhHHHHHhhhccCCCCC-CCCC---CCCccchHHHHHHHhcCeEeEEEEEeCCCCEEEEEEccC
Q 029298          114 IFWGSGSTWT----PRDAVSVWAGEEKYYTYAT-NTCQ---EGQQCGHYTQIVWKNTRRIGCARVVCDSGDVFMTCNYDP  185 (195)
Q Consensus       114 ~~~~~~~~~~----~~~~v~~W~~e~~~~~~~~-~~~~---~~~~~~~ftqmiw~~t~~vGCa~~~c~~~~~~~vC~Y~p  185 (195)
                      |++..+...+    +.++|+.||+|..+|++.. +.+.   .+..++|||||||+++++||||++.|.+ .+++||+|+|
T Consensus        87 l~~~~~~~~~~~~~~~~~v~~W~~E~~~y~~~~~~~~~~~~~~~~~ghfTQ~VW~~t~~vGCa~~~c~~-~~~~VC~Y~p  165 (196)
T 1u53_A           87 IFMSSDSGMDKAKAAEQASKAWFGELAEKGVGQNLKLTGGLFSRGVGHYTQMVWQETVKLGCYVEACSN-MCYVVCQYGP  165 (196)
T ss_dssp             EEEESCTTCCHHHHHHHHHHHHHTHHHHHCCCSCCBCCHHHHTTTCHHHHHHTCTTCCEEEEEEEECSS-CEEEEEEEES
T ss_pred             EEEECCCCCCHHHHHHHHHHHHHHHHHHcCCCcccccCccccCccccchheeeecccCEEeeEEEEeCC-CEEEEEEeCC
Confidence            9977543322    5789999999999999887 5554   3567999999999999999999999976 7899999999


Q ss_pred             CCCCCCCCCC
Q 029298          186 VGNYVGERPY  195 (195)
Q Consensus       186 ~gn~~g~~~Y  195 (195)
                      +||+.|++||
T Consensus       166 ~GN~~g~~~Y  175 (196)
T 1u53_A          166 AGNMMGKDIY  175 (196)
T ss_dssp             CCCCTTSBSS
T ss_pred             CCCCCCCcCC
Confidence            9999999998

>1qnx_A VES V 5, antigen 5; allergen, vespid venom; 1.90A {Vespula vulgaris} SCOP: d.111.1.1

Probab=100.00  E-value=4.9e-39  Score=247.08  Aligned_cols=140  Identities=30%  Similarity=0.563  Sum_probs=118.3

Q ss_pred             CChHHHHHHHHHHHHHHhhC--C---------------CCCCCchHHHHHHHHHHHHHhhhcCCcCCCCCCC--CCccce
Q 029298           52 GCIGEALQFLFDHNLVRAMK--W---------------ELPLMWDYDLEKYARWWANQRKADCKLQHSFPED--NFKLGE  112 (195)
Q Consensus        52 ~~~~~~~~iL~~hN~~R~~~--~---------------~~~L~wd~~La~~A~~~a~~~~~~c~~~h~~~~~--~~~~Ge  112 (195)
                      ...++++.||+.||++|+++  |               |++|+||++||+.||.||+    +|.+.|+.+..  ++.+||
T Consensus        41 l~~~~~~~iL~~HN~~R~~~a~G~~~~~~~~~~p~A~~m~~L~Wd~~La~~Aq~~A~----~C~~~h~~~~~~~~~~~Ge  116 (209)
T 1qnx_A           41 LTKQEKQDILKEHNDFRQKIARGLETRGNPGPQPPAKNMKNLVWNDELAYVAQVWAN----QCQYGHDTCRDVAKYQVGQ  116 (209)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHTTCCCCSTTCCCCCBSSCCCCEECHHHHHHHHHHHT----TCCCSCCSCCCCSSSCCEE
T ss_pred             CCHHHHHHHHHHHHHHHHHHhcCccccCCCCCCCccccccccccCHHHHHHHHHHHh----cCcccCCCccCCCCCCCcc
Confidence            45568999999999999986  2               7899999999999999999    99999987542  345899


Q ss_pred             EEEEeeCC---CCChhhhHHHHHhhhccCCCCCCCC-CCCCccchHHHHHHHhcCeEeEEEEEeCCCC---EEEEEEccC
Q 029298          113 NIFWGSGS---TWTPRDAVSVWAGEEKYYTYATNTC-QEGQQCGHYTQIVWKNTRRIGCARVVCDSGD---VFMTCNYDP  185 (195)
Q Consensus       113 N~~~~~~~---~~~~~~~v~~W~~e~~~~~~~~~~~-~~~~~~~~ftqmiw~~t~~vGCa~~~c~~~~---~~~vC~Y~p  185 (195)
                      ||++....   ..++.++|+.||+|..+|++..+-. ..+..++|||||||+++++||||++.|.+++   +++||+|+|
T Consensus       117 Nl~~~~~~~~~~~~~~~av~~W~~E~~~y~~~~~~~~~~~~~~gHfTQ~VW~~t~~vGCa~~~c~~~~~~~~~~VC~Y~P  196 (209)
T 1qnx_A          117 NVALTGSTAAKYDDPVKLVKMWEDEVKDYNPKKKFSGNDFLKTGHYTQMVWANTKEVGCGSIKYIQEKWHKHYLVCNYGP  196 (209)
T ss_dssp             EEEEEEESSSCCCCHHHHHHHHHGGGGGCCTTSCGGGSCHHHHHHHHHHTCTTCCEEEEEEEEEEETTEEEEEEEEEEES
T ss_pred             EEEEecccCCCcccHHHHHHHHHHhhhhcCCccCCCCCCCCcccchhhhhhhcCcEeeeEEEEEeCCCceeEEEEEEeCC
Confidence            99987543   2357899999999999999985421 1224689999999999999999999997654   489999999


Q ss_pred             CCCCCCCCCC
Q 029298          186 VGNYVGERPY  195 (195)
Q Consensus       186 ~gn~~g~~~Y  195 (195)
                      +||+.|++||
T Consensus       197 ~GN~~g~~~Y  206 (209)
T 1qnx_A          197 SGNFKNEELY  206 (209)
T ss_dssp             CCCCTTSCSS
T ss_pred             CCCCCCCCCC
Confidence            9999999998

>3q2u_A Glioma pathogenesis-related protein 1; crisp, membrane protein; 1.85A {Homo sapiens} PDB: 3q2r_A

Probab=100.00  E-value=2.6e-38  Score=242.34  Aligned_cols=136  Identities=34%  Similarity=0.672  Sum_probs=119.4

Q ss_pred             ChHHHHHHHHHHHHHHhhCC-----CCCCCchHHHHHHHHHHHHHhhhcCCcCCCCCCCC--------CccceEEEEeeC
Q 029298           53 CIGEALQFLFDHNLVRAMKW-----ELPLMWDYDLEKYARWWANQRKADCKLQHSFPEDN--------FKLGENIFWGSG  119 (195)
Q Consensus        53 ~~~~~~~iL~~hN~~R~~~~-----~~~L~wd~~La~~A~~~a~~~~~~c~~~h~~~~~~--------~~~GeN~~~~~~  119 (195)
                      ..+++++||+.||.+|++++     |.+|+||++||+.||.||+    +|.+.|+....+        ..+||||+.+..
T Consensus        15 ~~~f~~~~L~~HN~~R~~~~~~A~nM~~L~Wd~~La~~Aq~~A~----~C~~~h~~~~~~~~~~~~~~~~~GeNl~~~~~   90 (205)
T 3q2u_A           15 NEDFIKDCVRIHNKFRSEVKPTASDMLYMTWDPALAQIAKAWAS----NCQFSHNTRLKPPHKLHPNFTSLGENIWTGSV   90 (205)
T ss_dssp             CHHHHHHHHHHHHHHHHTCSSCBSSCBCCEECHHHHHHHHHHHT----TCBSSCCTTSSTTCCSSTTCSSCEEEEEEEET
T ss_pred             CHHHHHHHHHHHHHHHHhcCCCcccCccCccCHHHHHHHHHHHH----hCCCCCCccccccccccCCCCCCceEEEEccC
Confidence            44689999999999999985     6689999999999999999    999999875432        368999998876


Q ss_pred             CCCChhhhHHHHHhhhccCCCCCCCCCCCCccchHHHHHHHhcCeEeEEEEEeCC--------CCEEEEEEccCCCCCCC
Q 029298          120 STWTPRDAVSVWAGEEKYYTYATNTCQEGQQCGHYTQIVWKNTRRIGCARVVCDS--------GDVFMTCNYDPVGNYVG  191 (195)
Q Consensus       120 ~~~~~~~~v~~W~~e~~~~~~~~~~~~~~~~~~~ftqmiw~~t~~vGCa~~~c~~--------~~~~~vC~Y~p~gn~~g  191 (195)
                      ...++.++|+.||+|..+|+|..+.+.  ..+||||||||+++++||||++.|..        ..+++||+|+|+||+ |
T Consensus        91 ~~~~~~~~v~~W~~E~~~y~~~~~~~~--~~~gHfTQ~VW~~t~~vGCa~~~c~~~~g~~~~~~~~~~VC~Y~P~GN~-~  167 (205)
T 3q2u_A           91 PIFSVSSAITNWYDEIQDYDFKTRICK--KVCGHYTQVVWADSYKVGCAVQFCPKVSGFDALSNGAHFICNYGPGGNY-P  167 (205)
T ss_dssp             TTCCHHHHHHHHHGGGGGEETTTTEES--SCCHHHHHHTCTTCCEEEEEEEEESCCBTCSSCCSEEEEEEEEESCCCC-S
T ss_pred             CCCCHHHHHHHHHhHHHhcCCCCCCcc--chhHHHHHHHhhcccEeeeEEEEcCCCcCcccccccEEEEEEEECCCCc-C
Confidence            667889999999999999999887654  67899999999999999999999975        246899999999999 8


Q ss_pred             CCCC
Q 029298          192 ERPY  195 (195)
Q Consensus       192 ~~~Y  195 (195)
                      +.||
T Consensus       168 ~~pY  171 (205)
T 3q2u_A          168 TWPY  171 (205)
T ss_dssp             SCSS
T ss_pred             CCCC
Confidence            8888

>2ddb_A Pseudecin, channel blocker; crisp, snake venom, CNG channel, toxin; 1.90A {Pseudechis porphyriacus} PDB: 2epf_A 2dda_A

Probab=100.00  E-value=7.4e-39  Score=245.97  Aligned_cols=136  Identities=33%  Similarity=0.657  Sum_probs=120.3

Q ss_pred             HHHHHHHHHHHHHHhhCC-----CCCCCchHHHHHHHHHHHHHhhhcCCcCCCCCCCC----CccceEEEEeeCCCCChh
Q 029298           55 GEALQFLFDHNLVRAMKW-----ELPLMWDYDLEKYARWWANQRKADCKLQHSFPEDN----FKLGENIFWGSGSTWTPR  125 (195)
Q Consensus        55 ~~~~~iL~~hN~~R~~~~-----~~~L~wd~~La~~A~~~a~~~~~~c~~~h~~~~~~----~~~GeN~~~~~~~~~~~~  125 (195)
                      +++++||+.||.+|++++     |++|+||++||+.||.||+    +|.+.|+....+    +.+||||+++... .++.
T Consensus         4 ~~~~~iL~~HN~~R~~~~~~A~nM~~L~Wd~~La~~Aq~~A~----~C~~~Hs~~~~r~~~~~~~GENl~~~~~~-~~~~   78 (210)
T 2ddb_A            4 NYQKEIVDKHNALRRSVKPTARNMLQMKWNSHAAQNAKRWAD----RCTFAHSPPNTRTVGKLRCGENIFMSSQP-FPWS   78 (210)
T ss_dssp             CHHHHHHHHHHHHHTTCSSCBSSCBCCEECHHHHHHHHHHHT----TTCCSCCCGGGSEETTEECEEEEEEESSC-CCHH
T ss_pred             HHHHHHHHHHHHHHHHcCCccccCcccccCHHHHHHHHHHHh----cCCCCCCCccccccCCCCCcceEEEEcCC-CCHH
Confidence            478899999999999985     5689999999999999999    999999864322    2489999987643 4678


Q ss_pred             hhHHHHHhhhccCCCCCCCCCCCCccchHHHHHHHhcCeEeEEEEEeCCCCEEEEEEccCCCCCCCC--CCC
Q 029298          126 DAVSVWAGEEKYYTYATNTCQEGQQCGHYTQIVWKNTRRIGCARVVCDSGDVFMTCNYDPVGNYVGE--RPY  195 (195)
Q Consensus       126 ~~v~~W~~e~~~~~~~~~~~~~~~~~~~ftqmiw~~t~~vGCa~~~c~~~~~~~vC~Y~p~gn~~g~--~~Y  195 (195)
                      ++|+.||+|..+|+|..+.+..+..+||||||||+++++||||++.|.++.+++||+|+|+||+.|+  +||
T Consensus        79 ~av~~W~~E~~~y~~~~~~~~~~~~~gHfTQ~VW~~t~~vGCa~~~c~~~~~~~VC~Y~P~GN~~g~~~~pY  150 (210)
T 2ddb_A           79 GVVQAWYDEIKNFVYGIGAKPPGSVIGHYTQVVWYKSHLIGCASAKCSSSKYLYVCQYCPAGNIRGSIATPY  150 (210)
T ss_dssp             HHHHHHHGGGGGEETTTEESSTTSCCHHHHHHTCTTCCEEEEEEEEEETTEEEEEEEEESCSSSTTCTTCSS
T ss_pred             HHHHHHHHHhhhCCCCCCCCCCCCcccchhhhhhhhccEeeEEEEEcCCCCEEEEEEeeCCCCCCCCccCCC
Confidence            9999999999999999877666788999999999999999999999987778999999999999999  888

>1xta_A Natrin 1; crisp, serine protease, ION channel blocking, cobra, toxin; 1.58A {Naja atra} PDB: 2giz_A 1xx5_A 3mz8_A 1rc9_A 1wvr_A

Probab=100.00  E-value=2.1e-38  Score=245.20  Aligned_cols=139  Identities=34%  Similarity=0.607  Sum_probs=121.6

Q ss_pred             CChHHHHHHHHHHHHHHhhCC-----CCCCCchHHHHHHHHHHHHHhhhcCCcCCCCCCCC----CccceEEEEeeCCCC
Q 029298           52 GCIGEALQFLFDHNLVRAMKW-----ELPLMWDYDLEKYARWWANQRKADCKLQHSFPEDN----FKLGENIFWGSGSTW  122 (195)
Q Consensus        52 ~~~~~~~~iL~~hN~~R~~~~-----~~~L~wd~~La~~A~~~a~~~~~~c~~~h~~~~~~----~~~GeN~~~~~~~~~  122 (195)
                      ...+++++||+.||++|++++     |++|+||++||+.||.||+    +|.+.|+....+    +.+||||+++... .
T Consensus        10 ~~~~~~~~iL~~HN~~R~~~~~~A~nM~~L~Wd~~La~~Aq~~A~----~C~~~Hs~~~~r~~~~~~~GENl~~~~~~-~   84 (221)
T 1xta_A           10 RRKKKQKEIVDLHNSLRRRVSPTASNMLKMEWYPEAASNAERWAN----TCSLNHSPDNLRVLEGIQCGESIYMSSNA-R   84 (221)
T ss_dssp             TSHHHHHHHHHHHHHHHHTCSSCBSSCBCCEECHHHHHHHHHHHT----TTCCSCCCGGGCEETTEECEEEEEEESSC-C
T ss_pred             CCHHHHHHHHHHHHHHHHhcCCccccCccCccCHHHHHHHHHHHh----cCCCCCcCccccccCCCCCceEEEeecCC-C
Confidence            345689999999999999985     5699999999999999999    999999864322    2489999987643 3


Q ss_pred             ChhhhHHHHHhhhccCCCCCCCCCCCCccchHHHHHHHhcCeEeEEEEEeCCC--CEEEEEEccCCCCCCCC--CCC
Q 029298          123 TPRDAVSVWAGEEKYYTYATNTCQEGQQCGHYTQIVWKNTRRIGCARVVCDSG--DVFMTCNYDPVGNYVGE--RPY  195 (195)
Q Consensus       123 ~~~~~v~~W~~e~~~~~~~~~~~~~~~~~~~ftqmiw~~t~~vGCa~~~c~~~--~~~~vC~Y~p~gn~~g~--~~Y  195 (195)
                      ++.++|+.||+|..+|+|..+.+..+..+||||||||+++++||||++.|.++  .+++||+|+|+||+.|+  +||
T Consensus        85 ~~~~av~~W~~E~~~y~~~~~~~~~~~~~gHfTQ~VW~~t~~vGCa~~~c~~~~~~~~~VC~Y~P~GN~~g~~~~pY  161 (221)
T 1xta_A           85 TWTEIIHLWHDEYKNFVYGVGASPPGSVTGHYTQIVWYQTYRAGCAVSYCPSSAWSYFYVCQYCPSGNFQGKTATPY  161 (221)
T ss_dssp             CHHHHHHHHHGGGGGEETTTEESSTTCCCHHHHHHTCTTCCEEEEEEEECTTSSSSEEEEEEEESCCCCTTTTTCSS
T ss_pred             CHHHHHHHHHHHHHhcCCCCCCCCCCCchhHHHHHHHHhcCEeeEEEEEcCCCCccEEEEEEEeCCcCCCCCcCCCc
Confidence            68899999999999999998777667889999999999999999999999865  67999999999999999  888

>2vzn_A Venom allergen 3; major FIRE ANT allergen, SOL I 3, secreted, cross- reactivity; 3.05A {Solenopsis invicta}

Probab=100.00  E-value=2.3e-38  Score=244.75  Aligned_cols=140  Identities=33%  Similarity=0.582  Sum_probs=116.9

Q ss_pred             CChHHHHHHHHHHHHHHhhC-----------------CCCCCCchHHHHHHHHHHHHHhhhcCCcCCCCCCC--CCccce
Q 029298           52 GCIGEALQFLFDHNLVRAMK-----------------WELPLMWDYDLEKYARWWANQRKADCKLQHSFPED--NFKLGE  112 (195)
Q Consensus        52 ~~~~~~~~iL~~hN~~R~~~-----------------~~~~L~wd~~La~~A~~~a~~~~~~c~~~h~~~~~--~~~~Ge  112 (195)
                      ...++++.||+.||++|+++                 +|++|+||++||+.||.||+    +|.+.|+.+..  ++.+||
T Consensus        38 ~t~~~~~~iL~~HN~~R~~~a~G~~~~~~~~~~p~A~~m~~L~Wd~~La~~Aq~~A~----~C~~~Hs~c~~~~~~~~Ge  113 (218)
T 2vzn_A           38 FTDAEKDAIVNKHNELRQRVASGKEMRGTNGPQPPAVKMPNLTWDPELATIAQRWAN----QCTFEHDACRNVERFAVGQ  113 (218)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHTTCCCCCTTSCCCCBSCCCCCEECHHHHHHHHHHHT----TCCSSCCSCCCCSSSCCEE
T ss_pred             CCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCchhhchhccCCHHHHHHHHHHHH----hCCcCCCCCCCCccCCCce
Confidence            34568999999999999986                 27899999999999999999    99999987433  345899


Q ss_pred             EEEEeeCCC---CChhhhHHHHHhhhccCCCCCC---CCC--CCCccchHHHHHHHhcCeEeEEEEEeCC-CC---EEEE
Q 029298          113 NIFWGSGST---WTPRDAVSVWAGEEKYYTYATN---TCQ--EGQQCGHYTQIVWKNTRRIGCARVVCDS-GD---VFMT  180 (195)
Q Consensus       113 N~~~~~~~~---~~~~~~v~~W~~e~~~~~~~~~---~~~--~~~~~~~ftqmiw~~t~~vGCa~~~c~~-~~---~~~v  180 (195)
                      ||++.....   ..+.++|+.||+|..+|++...   +..  ....++|||||||+++++||||++.|.+ ++   +++|
T Consensus       114 Nl~~~~~~~~~~~~~~~av~~W~~E~~~y~~~~~~~~~~~~~~~~~~gHfTQ~VW~~t~~vGCa~~~c~~~~~~~~~~vV  193 (218)
T 2vzn_A          114 NIAATSSSGKNKSTPNEMILLWYNEVKDFDNRWISSFPSDDNILMKVGHYTQIVWAKTTKIGCGRIMFKEPDNWTKHYLV  193 (218)
T ss_dssp             EEEEEEECC-CCCCHHHHHHHHHGGGGGCCGGGSSSCCCCHHHHHHHHHHHHHTCTTCCEEEEEEEEEECTTSCEEEEEE
T ss_pred             EEEEEeccCCccchHHHHHHHHHHHHHhcCcccccCCCCCcccCCCcchHHHHHHHhcCEEeEEEEEEeCCCCeEEEEEE
Confidence            999876432   3467999999999999998842   111  1245899999999999999999999976 32   5899


Q ss_pred             EEccCCCCCCCCCCC
Q 029298          181 CNYDPVGNYVGERPY  195 (195)
Q Consensus       181 C~Y~p~gn~~g~~~Y  195 (195)
                      |+|+|+||+.|+++|
T Consensus       194 C~Y~P~GN~~g~~~y  208 (218)
T 2vzn_A          194 CNYGPAGNVLGAPIY  208 (218)
T ss_dssp             EEEESCCCCTTSCSS
T ss_pred             EEECCCCCCCCCccc
Confidence            999999999999998

>3u3l_C Tablysin 15; CAP domain, alphavbeta3 integrin, salivary gland, protein BI; HET: PLM CIT; 1.57A {Tabanus yao} PDB: 3u3n_C* 3u3u_C*

Probab=100.00  E-value=1.8e-36  Score=236.44  Aligned_cols=139  Identities=19%  Similarity=0.211  Sum_probs=115.0

Q ss_pred             CChHHHHHHHHHHHHHHhhC-----------CCCCCCchHHHHHHHHHHHHHhhhcCCcCCCCCCCC---CccceEEEEe
Q 029298           52 GCIGEALQFLFDHNLVRAMK-----------WELPLMWDYDLEKYARWWANQRKADCKLQHSFPEDN---FKLGENIFWG  117 (195)
Q Consensus        52 ~~~~~~~~iL~~hN~~R~~~-----------~~~~L~wd~~La~~A~~~a~~~~~~c~~~h~~~~~~---~~~GeN~~~~  117 (195)
                      ...++++.||+.||++|+.+           +|++|+||++||+.||.||+    +|.+.|+.+...   ..+|||++..
T Consensus        36 ~s~~~~~~il~~HN~~R~~va~G~~~~P~A~nM~~L~Wd~~La~~Aq~~a~----~C~~~h~~c~~~~~~~~~Gen~~~~  111 (233)
T 3u3l_C           36 LLKEHRNEILSKINDVRDHVAKGSWGLPVAARMKVVVWDAELAGLAKRHTK----GCVGETHACRNTERFWLPGQLNFKY  111 (233)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHTTCTTCCCBSSCBCCEECHHHHHHHHHHHT----TCCSCCCCBCCCSSCSSCEEEEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHHHcCCCCCCccccCCccEECHHHHHHHHHHHH----hCCCCCCcccccCcCCcCeEEEEEe
Confidence            45679999999999999998           69999999999999999999    999999864322   2589998765


Q ss_pred             eCCC-CC----hhhhHHHHHhhhccCCCCC----CCCCCCCccchHHHHHHHhcCeEeEEEEEeCCCC---EEEEEEccC
Q 029298          118 SGST-WT----PRDAVSVWAGEEKYYTYAT----NTCQEGQQCGHYTQIVWKNTRRIGCARVVCDSGD---VFMTCNYDP  185 (195)
Q Consensus       118 ~~~~-~~----~~~~v~~W~~e~~~~~~~~----~~~~~~~~~~~ftqmiw~~t~~vGCa~~~c~~~~---~~~vC~Y~p  185 (195)
                      .+.. .+    +.++|+.||+|.++|++..    +....+..+||||||||+++++||||++.|..++   +++||+|+|
T Consensus       112 ~~~~~~~~~~~~~~av~~W~~E~~~y~~~~~~~~~~~~~~~~~gHfTQmVW~~t~~vGCa~~~c~~~~~~~~~~VC~Y~p  191 (233)
T 3u3l_C          112 SGDKLPRIKELIDDAVKKGHLQKHNITREIIENYRENGPNGDVKELALAISDRVTAVGCGLTTWEDGAKARALLTCNFSS  191 (233)
T ss_dssp             EESSCCCHHHHHHHHHHHHHGGGGTCCHHHHHSCCSCC--CCCHHHHHHTCTTCCEEEEEEEEEEETTEEEEEEEEEESC
T ss_pred             cCCCCCCHHHHHHHHHHHHHHHHhhhCHHHHhcCCCcccccchhhhHHHhhhcCCeeeeEEEEEEcCCeeEEEEEEECCC
Confidence            5432 23    5789999999999999653    1223356799999999999999999999997653   599999998


Q ss_pred             CCCCCCCCCC
Q 029298          186 VGNYVGERPY  195 (195)
Q Consensus       186 ~gn~~g~~~Y  195 (195)
                       ||+.|++||
T Consensus       192 -GN~~g~~~Y  200 (233)
T 3u3l_C          192 -QNTRGRPVY  200 (233)
T ss_dssp             -CCCTTSCSS
T ss_pred             -CCCCCCcee
Confidence             999999998

>3nt8_A Ancylostoma secreted protein 1; pathogenesis related-1 protein, cysteine-rich secretory PROT domain, immune system; 2.20A {Necator americanus}

Probab=100.00  E-value=5.4e-36  Score=252.20  Aligned_cols=135  Identities=21%  Similarity=0.287  Sum_probs=116.1

Q ss_pred             ChHHHHHHHHHHHHHHhhC----------------CCCCCCchHHHHHHHHHHHHHhhhcCCcCCCCCCCCCccceEEEE
Q 029298           53 CIGEALQFLFDHNLVRAMK----------------WELPLMWDYDLEKYARWWANQRKADCKLQHSFPEDNFKLGENIFW  116 (195)
Q Consensus        53 ~~~~~~~iL~~hN~~R~~~----------------~~~~L~wd~~La~~A~~~a~~~~~~c~~~h~~~~~~~~~GeN~~~  116 (195)
                      ..++++.||+.||++|+++                +|++|+||++||+.||.||+    +|.+.|+...   .+|||++.
T Consensus        33 ~~~~~~~il~~HN~~R~~~A~G~~~~~~~~~p~A~nM~~L~Wd~eLa~~Aq~~a~----~C~~~h~~~~---~~GeNl~~  105 (424)
T 3nt8_A           33 TDSDRQAFLDFHNNARRRVAKGLEDSNSGKLNPAKNMYKLSWDCAMEQQLQDAIQ----SCPSGFAGIQ---GVAQNTMS  105 (424)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHTTCCBCSSSBCCCEESCBCCEECHHHHHHHHHHCT----TCCSSCCCCT---TCEEEEEE
T ss_pred             CHHHHHHHHHHHHHHHHHHhCCcccCCCCCCcccccCCccccCHHHHHHHHHHHh----hCCCcCCCCC---CceeeEEe
Confidence            4458899999999999997                37889999999999999999    9999987543   58999997


Q ss_pred             eeCCC------CChhhhHHHHHhhhccCCCCCCCCCCCCccchHHHHHHHhcCeEeEEEEEeCCCCEEEEEEccCCCCCC
Q 029298          117 GSGST------WTPRDAVSVWAGEEKYYTYATNTCQEGQQCGHYTQIVWKNTRRIGCARVVCDSGDVFMTCNYDPVGNYV  190 (195)
Q Consensus       117 ~~~~~------~~~~~~v~~W~~e~~~~~~~~~~~~~~~~~~~ftqmiw~~t~~vGCa~~~c~~~~~~~vC~Y~p~gn~~  190 (195)
                      .....      ..++++|+.||+|.++|++.......+..++|||||||+++++||||++.|.. .+++||+|+|+||+.
T Consensus       106 ~~~~~~~~~~~~~~~~~v~~W~~E~~~y~~~~~~~~~~~~~ghfTqmvw~~t~~vGCa~~~c~~-~~~~VC~Y~p~GN~~  184 (424)
T 3nt8_A          106 WSSSGGYPDPSVKIEPTLSGWWSGAKKNGVGPDNKYTGGGLFAFSNMVYSETTKLGCAYKVCGT-KLAVSCIYNGVGYIT  184 (424)
T ss_dssp             EECTTCCSCGGGGHHHHHHHHHTHHHHHCCCTTCBCCCTTCHHHHHHHCTTCCEEEEEEEEETT-EEEEEEEESSCCCST
T ss_pred             ccccCCcCCHHHHHHHHHHHHHHHHHHcCCcccccCCCcchHHHHHHHHHhcCeeceEEEEeCC-cEEEEEEECCCCCcc
Confidence            65221      12578999999999999988644444567899999999999999999999976 789999999999999


Q ss_pred             CCCCC
Q 029298          191 GERPY  195 (195)
Q Consensus       191 g~~~Y  195 (195)
                      |++||
T Consensus       185 g~~~Y  189 (424)
T 3nt8_A          185 NQPMW  189 (424)
T ss_dssp             TCBSS
T ss_pred             ccccc
Confidence            99998

>3nt8_A Ancylostoma secreted protein 1; pathogenesis related-1 protein, cysteine-rich secretory PROT domain, immune system; 2.20A {Necator americanus}

Probab=100.00  E-value=5.5e-35  Score=246.06  Aligned_cols=141  Identities=35%  Similarity=0.540  Sum_probs=121.1

Q ss_pred             ccCChHHHHHHHHHHHHHHhhCC-----------------CCCCCchHHHHHHHHHHHHHhhhcCCcCCCCCCCCCccce
Q 029298           50 CWGCIGEALQFLFDHNLVRAMKW-----------------ELPLMWDYDLEKYARWWANQRKADCKLQHSFPEDNFKLGE  112 (195)
Q Consensus        50 ~~~~~~~~~~iL~~hN~~R~~~~-----------------~~~L~wd~~La~~A~~~a~~~~~~c~~~h~~~~~~~~~Ge  112 (195)
                      .....++++.||+.||++|++++                 |.+|+||++||+.||.||+    +|.+.|+....+..+||
T Consensus       231 ~~~~~~~~~~iL~~HN~~R~~~a~G~~~~~~~~~~p~A~nM~~L~Wd~~La~~Aq~~a~----~C~~~h~~~~~~~~~Ge  306 (424)
T 3nt8_A          231 TGMTDSVRDTFLSVHNEFRSSVARGLEPDALGGNAPKAAKMLKMVYDCEVEASAIRHGN----KCVYQHSHGEDRPGLGE  306 (424)
T ss_dssp             CSCCHHHHHHHHHHHHHHHHHHHTTCSBCTTSSBCCCBSSCBCCEECHHHHHHHHHHHT----TCCSSCCCTTTSTTCEE
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHhCCCcccCCCCCCCCCCCchhceEhHHHHHHHHHHHH----hCcccCCCccccCccce
Confidence            35567899999999999999864                 4589999999999999999    99999987665567999


Q ss_pred             EEEEeeCCCC----ChhhhHHHHHhhhccCCCCCCC-C------CCCCccchHHHHHHHhcCeEeEEEEEeCCCCEEEEE
Q 029298          113 NIFWGSGSTW----TPRDAVSVWAGEEKYYTYATNT-C------QEGQQCGHYTQIVWKNTRRIGCARVVCDSGDVFMTC  181 (195)
Q Consensus       113 N~~~~~~~~~----~~~~~v~~W~~e~~~~~~~~~~-~------~~~~~~~~ftqmiw~~t~~vGCa~~~c~~~~~~~vC  181 (195)
                      ||++......    .+.++|+.||+|.++|++.... +      ..+..++|||||||+++++||||++.|.++ .++||
T Consensus       307 Nl~~~~~~~~~~~~~~~~~v~~W~~E~~~y~~~~~~~~~~~~~~~~~~~~gHfTQ~VW~~t~~vGCa~~~c~~~-~~~VC  385 (424)
T 3nt8_A          307 NIYKTSVLKFDKNKAAKQASQLWWNELKEYGVGPSNVLTTALWNRPNMQIGHYTQMAWDTTYKLGCAVVFCNDF-TFGVC  385 (424)
T ss_dssp             EEEEESSTTCCHHHHHHHHHHHHHTHHHHTCCCTTCBCCHHHHTCTTCCCHHHHHHHCTTCCEEEEEEEECSSS-EEEEE
T ss_pred             eEEecccCCCchHHHHHHHHHHHHHHHHhcCCCCCcccccccccCCCCcccchHHHhhhhcceeeeEEEEeCCC-eEEEE
Confidence            9998765443    3688999999999999986543 2      135689999999999999999999999764 69999


Q ss_pred             EccCCCCCCCCCCC
Q 029298          182 NYDPVGNYVGERPY  195 (195)
Q Consensus       182 ~Y~p~gn~~g~~~Y  195 (195)
                      +|+|+||+.|++||
T Consensus       386 ~Y~p~GN~~g~~~Y  399 (424)
T 3nt8_A          386 QYGPGGNYMGHVIY  399 (424)
T ss_dssp             EEESCCCCTTSBSS
T ss_pred             EecCCCCcCCCCCC
Confidence            99999999999998

>3s6s_A AC-Asp-7; pathogenesis-related protein, SCP/TAPS, unknown function; 2.40A {Ancylostoma caninum} PDB: 3s6v_A 3s6u_A

Probab=99.97  E-value=4.2e-31  Score=200.76  Aligned_cols=117  Identities=16%  Similarity=0.038  Sum_probs=94.5

Q ss_pred             cCChHHHHHHHHHHHHHHhhC------------CCCCCCchHHHHHHHHHHHHHhhhcCCcCCCCCCCCCccceEEEEee
Q 029298           51 WGCIGEALQFLFDHNLVRAMK------------WELPLMWDYDLEKYARWWANQRKADCKLQHSFPEDNFKLGENIFWGS  118 (195)
Q Consensus        51 ~~~~~~~~~iL~~hN~~R~~~------------~~~~L~wd~~La~~A~~~a~~~~~~c~~~h~~~~~~~~~GeN~~~~~  118 (195)
                      .....+++.||+.||++|+.+            +|++|+||++||+.||.||+     |. .+...     .|||++..+
T Consensus        13 ~lt~~~~~~il~~HN~~R~~va~G~~~~~p~A~nM~~l~Wd~eLa~~Aq~~A~-----C~-~~~~~-----~GeNl~~~s   81 (206)
T 3s6s_A           13 MVDRPFREAIDTFHNGLRQRIAKGEAEGYGPAREMYGLVYDCGLEEEARKEIK-----LP-GYADL-----HHRGVTRFS   81 (206)
T ss_dssp             CSCHHHHHHHHHHHHHHHHHHHTTCSTTSCSCCCCBCCEEEHHHHHHHHHHHH-----ST-THHHH-----TTCEEEEEE
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhCCCCCCCcchhhcCcCCchHHHHHHHHHhhc-----CC-CCCCC-----CCcEEEEec
Confidence            455678999999999999974            47789999999999999997     77 33211     299997544


Q ss_pred             CCC--CCh--hhhHHHHHhhhccCCCCCCCCCCCCccchHHHHHHHhcCeEeEEEEEeC----CC-CEEEEEEccCCCCC
Q 029298          119 GST--WTP--RDAVSVWAGEEKYYTYATNTCQEGQQCGHYTQIVWKNTRRIGCARVVCD----SG-DVFMTCNYDPVGNY  189 (195)
Q Consensus       119 ~~~--~~~--~~~v~~W~~e~~~~~~~~~~~~~~~~~~~ftqmiw~~t~~vGCa~~~c~----~~-~~~~vC~Y~p~gn~  189 (195)
                      +..  ..+  .++|+.||+|               .++|||||||+++++||||++.|.    .+ .+++||+|+|+|  
T Consensus        82 g~~~~~~~~~~~av~~W~~E---------------~~gHfTQmVW~~Tt~VGCa~~~C~~~~~~~~~~~vVCnY~p~G--  144 (206)
T 3s6s_A           82 GDYEGSAISALKEILETFSA---------------DKNSMRQVVYPKATRFGCSGRLRRNKKTGMRRMDWVCVYDKKP--  144 (206)
T ss_dssp             EECSSCHHHHHHHHHHHHTT---------------CHHHHHHHHCTTCCEEEEEEEECC-------EEEEEEEESCCC--
T ss_pred             CCCCccchhHHHHHHHHHhh---------------hhhhHHHHHHHhhceeeEEEEEecCcCCCCceEEEEEEeCCCC--
Confidence            321  123  3899999999               469999999999999999999995    23 469999999988  


Q ss_pred             CCCCCC
Q 029298          190 VGERPY  195 (195)
Q Consensus       190 ~g~~~Y  195 (195)
                      .|++||
T Consensus       145 ~g~~~Y  150 (206)
T 3s6s_A          145 KDGESF  150 (206)
T ss_dssp             CTTCCC
T ss_pred             CCCCCc
Confidence            899998

>4ifa_A Extracellular protein containing A SCP domain; vaccine candi virulence, pathogenesis, center for structural genomics of infectious diseases; HET: MSE; 1.50A {Bacillus anthracis}

Probab=99.81  E-value=7.5e-20  Score=148.51  Aligned_cols=106  Identities=22%  Similarity=0.224  Sum_probs=92.5

Q ss_pred             HHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHhhhcCCcCCCCCCCC-------------CccceEEEEeeCCC
Q 029298           55 GEALQFLFDHNLVRAMKWELPLMWDYDLEKYARWWANQRKADCKLQHSFPEDN-------------FKLGENIFWGSGST  121 (195)
Q Consensus        55 ~~~~~iL~~hN~~R~~~~~~~L~wd~~La~~A~~~a~~~~~~c~~~h~~~~~~-------------~~~GeN~~~~~~~~  121 (195)
                      .+++++|++||.+|+++|++||.||..|++.|+.||++|+..|.++|..+++.             ..+||||+++..  
T Consensus       219 a~e~~vl~lvN~~Ra~~Gl~pL~~d~~L~~aAq~hA~dMa~~~~fsH~~~~G~~~~~R~~~~G~~~~~~GENIA~G~~--  296 (339)
T 4ifa_A          219 GNMQQIFDLTNIIRSRHNLPLLAWDQQTADVAIGHSKDMKDNNYFSHDSPTLGTLGDRLQRGKVGFQLAGENIAAQHS--  296 (339)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCCEECHHHHHHHHHHHHHHHHHTCCSSSBTTTBCHHHHHHHTTCCCSEEEEEEEESCS--
T ss_pred             HHHHHHHHHHHHHHHHcCCCCCccCHHHHHHHHHHHHHHhhcCCeecCCCCCCCHHHHHHHcCCCcCceeEEEEEeCC--
Confidence            46789999999999999999999999999999999999999999999987652             137999998865  


Q ss_pred             CChhhhHHHHHhhhccCCCCCCCCCCCCccchHHHHHHHhcCeEeEEEEEeCCCCEEEEEEcc
Q 029298          122 WTPRDAVSVWAGEEKYYTYATNTCQEGQQCGHYTQIVWKNTRRIGCARVVCDSGDVFMTCNYD  184 (195)
Q Consensus       122 ~~~~~~v~~W~~e~~~~~~~~~~~~~~~~~~~ftqmiw~~t~~vGCa~~~c~~~~~~~vC~Y~  184 (195)
                       ++..+|+.|++.                .||+.+|+|.+.++||||+..     .|++..|.
T Consensus       297 -s~~~av~~WmnS----------------pGHr~NIL~~~~t~iGvGv~~-----~YwtQ~F~  337 (339)
T 4ifa_A          297 -DGVAALQGWLNS----------------EGHRKNLLNEQFTGLGVGVYD-----KFYTQNFI  337 (339)
T ss_dssp             -SHHHHHHHHHTS----------------HHHHHHHTCTTCCEEEEEEET-----TEEEEEEE
T ss_pred             -CHHHHHHHHhCC----------------HhHHHHHhCCCCCEEEEEEEe-----cEEEEEEe
Confidence             689999999953                389999999999999999872     36676664

>4h0a_A Uncharacterized protein; CAP protein family, cysteine-rich secretory proteins, struct genomics, joint center for structural genomics; 1.90A {Staphylococcus aureus subsp}

Probab=99.64  E-value=3.5e-16  Score=126.64  Aligned_cols=104  Identities=13%  Similarity=0.147  Sum_probs=82.5

Q ss_pred             HHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHhhhcCCcCCCCCCCC-------------CccceEEEEeeCCC
Q 029298           55 GEALQFLFDHNLVRAMKWELPLMWDYDLEKYARWWANQRKADCKLQHSFPEDN-------------FKLGENIFWGSGST  121 (195)
Q Consensus        55 ~~~~~iL~~hN~~R~~~~~~~L~wd~~La~~A~~~a~~~~~~c~~~h~~~~~~-------------~~~GeN~~~~~~~~  121 (195)
                      ..+++||+++|.+|+++|++||.||..|++.|+.||.+|+... +.|..+.+.             ..+||||+.+..  
T Consensus       204 ~~e~~il~liN~~R~~~GL~pL~~d~~L~~aA~~ha~dma~~~-~~h~~~~g~~~~~R~~~~g~~~~~~gENIA~g~~--  280 (323)
T 4h0a_A          204 NQLISLYEVTNEMRKLKGLKPLKINSDLAHIASNNLYEATSNG-SDSVEFTEDALRGQLDKNHVTYKTTAQNVGYAFN--  280 (323)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCCEECHHHHHHHHHHHHHHTC-------CCCHHHHHHHHHHTTCCCSEEEEEEEESCC--
T ss_pred             HHHHHHHHHHHHHHHHcCCcccCccHhHHHHHHHHHHHHhhCC-CCCcCCCCCCHHHHHHHcCCCcCeeeeEEecCCC--
Confidence            4677899999999999999999999999999999999998655 445544431             236999998865  


Q ss_pred             CChhhhHHHHHhhhccCCCCCCCCCCCCccchHHHHHHHhcCeEeEEEEEeCCCCEEEEEEc
Q 029298          122 WTPRDAVSVWAGEEKYYTYATNTCQEGQQCGHYTQIVWKNTRRIGCARVVCDSGDVFMTCNY  183 (195)
Q Consensus       122 ~~~~~~v~~W~~e~~~~~~~~~~~~~~~~~~~ftqmiw~~t~~vGCa~~~c~~~~~~~vC~Y  183 (195)
                       ++..+|++|++..                ||..+|+..+.++||+|+..    . |++..|
T Consensus       281 -~~~~vv~~WmnSp----------------gHR~NiL~~~~t~iGvGv~~----~-YwTQ~F  320 (323)
T 4h0a_A          281 -DVPTLIHSWMNSD----------------IHRSRLLNSKYDEMGGDVMR----D-YYSLIF  320 (323)
T ss_dssp             -SHHHHHHHHHTSH----------------HHHHHHTCSSCCEEEEEEET----T-EEEEEE
T ss_pred             -CHHHHHHHHHcCH----------------HHHHHHcCCCCCEEEEEEEc----C-EEEEEE
Confidence             6899999999544                89999999999999999862    2 556554

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	195
d1cfea_	135	d.111.1.1 (A:) Pathogenesis-related protein 1 (PR1	3e-36
d1smba_	149	d.111.1.1 (A:) Golgi-associated PR-1 protein {Huma	6e-33
d1rc9a1	164	d.111.1.1 (A:1-164) Cysteine-rich secretory protei	7e-33
d1qnxa_	209	d.111.1.1 (A:) Insect allergen 5 (AG5) {Yellow jac	3e-29

>d1cfea_ d.111.1.1 (A:) Pathogenesis-related protein 1 (PR1) {Tomato (Lycopersicon esculentum), P14a [TaxId: 4081]} Length = 135

class: Alpha and beta proteins (a+b)
fold: PR-1-like
superfamily: PR-1-like
family: PR-1-like
domain: Pathogenesis-related protein 1 (PR1)
species: Tomato (Lycopersicon esculentum), P14a [TaxId: 4081]

 Score =  121 bits (304), Expect = 3e-36
 Identities = 60/137 (43%), Positives = 81/137 (59%), Gaps = 7/137 (5%)

Query: 59  QFLFDHNLVRAMKWELPLMWDYDLEKYARWWANQRKADCKLQHSFPEDNFKLGENIFWGS 118
            +L  HN  RA     P+ WD +L   A+ +AN R  DC L HS   +N           
Sbjct: 6   DYLAVHNDARAQVGVGPMSWDANLASRAQNYANSRAGDCNLIHSGAGENL-------AKG 58

Query: 119 GSTWTPRDAVSVWAGEEKYYTYATNTCQEGQQCGHYTQIVWKNTRRIGCARVVCDSGDVF 178
           G  +T R AV +W  E   Y YATN C  G++C HYTQ+VW+N+ R+GC R  C++G  F
Sbjct: 59  GGDFTGRAAVQLWVSERPSYNYATNQCVGGKKCRHYTQVVWRNSVRLGCGRARCNNGWWF 118

Query: 179 MTCNYDPVGNYVGERPY 195
           ++CNYDPVGN++G+RPY
Sbjct: 119 ISCNYDPVGNWIGQRPY 135

>d1smba_ d.111.1.1 (A:) Golgi-associated PR-1 protein {Human (Homo sapiens) [TaxId: 9606]} Length = 149

class: Alpha and beta proteins (a+b)
fold: PR-1-like
superfamily: PR-1-like
family: PR-1-like
domain: Golgi-associated PR-1 protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  113 bits (283), Expect = 6e-33
 Identities = 38/137 (27%), Positives = 59/137 (43%), Gaps = 3/137 (2%)

Query: 59  QFLFDHNLVRAMKWELPLMWDYDLEKYARWWANQRKADCKLQHSFPEDNFKLGENIFWGS 118
           + L  HN  R      PL    +L + A+ ++    +   L+HS      + GEN+ W S
Sbjct: 9   EVLKAHNEYRQKHGVPPLKLCKNLNREAQQYSEALASTRILKHSPESSRGQCGENLAWAS 68

Query: 119 GSTWTPRDAVSVWAGEEKYYTYATNTCQEGQQCGHYTQIVWKNTRRIGCARVVCDSGDVF 178
                 ++    W  E K Y +       G   GH+T +VWKNT+++G  +     G  F
Sbjct: 69  YDQT-GKEVADRWYSEIKNYNFQQPGFTSG--TGHFTAMVWKNTKKMGVGKASASDGSSF 125

Query: 179 MTCNYDPVGNYVGERPY 195
           +   Y P GN V E  +
Sbjct: 126 VVARYFPAGNVVNEGFF 142

>d1rc9a1 d.111.1.1 (A:1-164) Cysteine-rich secretory protein (SteCRISP) {Chinese green tree viper (Trimeresurus stejnegeri) [TaxId: 39682]} Length = 164

class: Alpha and beta proteins (a+b)
fold: PR-1-like
superfamily: PR-1-like
family: PR-1-like
domain: Cysteine-rich secretory protein (SteCRISP)
species: Chinese green tree viper (Trimeresurus stejnegeri) [TaxId: 39682]

 Score =  113 bits (284), Expect = 7e-33
 Identities = 43/146 (29%), Positives = 57/146 (39%), Gaps = 10/146 (6%)

Query: 59  QFLFDHNLVRAM-----KWELPLMWDYDLEKYARWWANQRKADCKLQHSFPEDNFKLGEN 113
           + +  HN +R          L + W  +    A  WA +         S   +  K GEN
Sbjct: 17  EIVDLHNSLRRSVNPTASNMLRMEWYPEAADNAERWAYRCIESHSSYESRVIEGIKCGEN 76

Query: 114 IFWGSGSTWTPRDAVSVWAGEEKYYTYATNTCQEGQQCGHYTQIVWKNTRRIGCARVVCD 173
           I+          D +  W  E K + Y           GHYTQIVW  + RIGCA   C 
Sbjct: 77  IYMSPYP-MKWTDIIHAWHDEYKDFKYGVGADPPNAVTGHYTQIVWYKSYRIGCAAAYCP 135

Query: 174 SGD--VFMTCNYDPVGNYVGE--RPY 195
           S     F  C Y P GN++G+   PY
Sbjct: 136 SSPYSYFFVCQYCPAGNFIGKTATPY 161

>d1qnxa_ d.111.1.1 (A:) Insect allergen 5 (AG5) {Yellow jacket (Vespula vulgaris), Ves v 5 [TaxId: 7454]} Length = 209

class: Alpha and beta proteins (a+b)
fold: PR-1-like
superfamily: PR-1-like
family: PR-1-like
domain: Insect allergen 5 (AG5)
species: Yellow jacket (Vespula vulgaris), Ves v 5 [TaxId: 7454]

 Score =  105 bits (262), Expect = 3e-29
 Identities = 35/129 (27%), Positives = 56/129 (43%), Gaps = 9/129 (6%)

Query: 74  LPLMWDYDLEKYARWWANQRKADCKLQHSFPEDNFKLGENIFWGSGSTW---TPRDAVSV 130
             L+W+ +L   A+ WANQ +             +++G+N+     +      P   V +
Sbjct: 80  KNLVWNDELAYVAQVWANQCQYGHDTCRDVA--KYQVGQNVALTGSTAAKYDDPVKLVKM 137

Query: 131 WAGEEKYYTYATNTCQ-EGQQCGHYTQIVWKNTRRIGCARVVCDSGD---VFMTCNYDPV 186
           W  E K Y         +  + GHYTQ+VW NT+ +GC  +          ++ CNY P 
Sbjct: 138 WEDEVKDYNPKKKFSGNDFLKTGHYTQMVWANTKEVGCGSIKYIQEKWHKHYLVCNYGPS 197

Query: 187 GNYVGERPY 195
           GN+  E  Y
Sbjct: 198 GNFKNEELY 206

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	195
d1cfea_	135	Pathogenesis-related protein 1 (PR1) {Tomato (Lyco	100.0
d1smba_	149	Golgi-associated PR-1 protein {Human (Homo sapiens	100.0
d1rc9a1	164	Cysteine-rich secretory protein (SteCRISP) {Chines	100.0
d1qnxa_	209	Insect allergen 5 (AG5) {Yellow jacket (Vespula vu	100.0

>d1cfea_ d.111.1.1 (A:) Pathogenesis-related protein 1 (PR1) {Tomato (Lycopersicon esculentum), P14a [TaxId: 4081]}

class: Alpha and beta proteins (a+b)
fold: PR-1-like
superfamily: PR-1-like
family: PR-1-like
domain: Pathogenesis-related protein 1 (PR1)
species: Tomato (Lycopersicon esculentum), P14a [TaxId: 4081]

Probab=100.00  E-value=8.9e-44  Score=254.11  Aligned_cols=133  Identities=47%  Similarity=0.926  Sum_probs=121.7

Q ss_pred             HHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHhhhcCCcCCCCCCCCCccceEEEEeeCCCCChhhhHHHHHhhh
Q 029298           56 EALQFLFDHNLVRAMKWELPLMWDYDLEKYARWWANQRKADCKLQHSFPEDNFKLGENIFWGSGSTWTPRDAVSVWAGEE  135 (195)
Q Consensus        56 ~~~~iL~~hN~~R~~~~~~~L~wd~~La~~A~~~a~~~~~~c~~~h~~~~~~~~~GeN~~~~~~~~~~~~~~v~~W~~e~  135 (195)
                      +.+++|+.||.+|+.++|+||+||++|++.||.||++++..|.+.|+      .+||||+.+.. ..++.++|+.||+|.
T Consensus         3 ~~q~~l~~HN~~R~~~~~~~L~Wd~~La~~Aq~~A~~~~~~~~~~~~------~~GeNi~~~~~-~~~~~~av~~W~~E~   75 (135)
T d1cfea_           3 SPQDYLAVHNDARAQVGVGPMSWDANLASRAQNYANSRAGDCNLIHS------GAGENLAKGGG-DFTGRAAVQLWVSER   75 (135)
T ss_dssp             SHHHHHHHHHHHHHHTTCCCCEECSHHHHHHHHHHHHHTTTCCSCSC------SSSBCCEECSS-SCCHHHHHHHHHTTG
T ss_pred             cHHHHHHHHHHHHHHcCCCcCEECHHHHHHHHHHHHHHhhCCCcccC------ccccceeccCC-CCCHHHHHHHHHhhc
Confidence            35789999999999999999999999999999999987777777665      36999997653 457899999999999


Q ss_pred             ccCCCCCCCCCCCCccchHHHHHHHhcCeEeEEEEEeCCCCEEEEEEccCCCCCCCCCCC
Q 029298          136 KYYTYATNTCQEGQQCGHYTQIVWKNTRRIGCARVVCDSGDVFMTCNYDPVGNYVGERPY  195 (195)
Q Consensus       136 ~~~~~~~~~~~~~~~~~~ftqmiw~~t~~vGCa~~~c~~~~~~~vC~Y~p~gn~~g~~~Y  195 (195)
                      .+|++..+.+.....++|||||||+++++||||++.|.++++++||+|+|+||+.|++||
T Consensus        76 ~~y~~~~~~~~~~~~~ghftQmvW~~t~~vGCa~~~c~~~~~~vVC~Y~P~GN~~g~~pY  135 (135)
T d1cfea_          76 PSYNYATNQCVGGKKCRHYTQVVWRNSVRLGCGRARCNNGWWFISCNYDPVGNWIGQRPY  135 (135)
T ss_dssp             GGEEGGGTEECSSSCCSSHHHHHCTTCCEEEEEEEECTTSSEEEEEECSSCCSCTTSCCC
T ss_pred             cccccccccCCCCcccchhheeeehhheEeeEEEEEECCCCEEEEEEEeCCCCcCCcCCC
Confidence            999999988887888999999999999999999999999899999999999999999999

>d1smba_ d.111.1.1 (A:) Golgi-associated PR-1 protein {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: PR-1-like
superfamily: PR-1-like
family: PR-1-like
domain: Golgi-associated PR-1 protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-42  Score=251.73  Aligned_cols=139  Identities=27%  Similarity=0.424  Sum_probs=127.1

Q ss_pred             hHHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHhhhcCCcCCCCCCCCCccceEEEEeeCCCCChhhhHHHHHh
Q 029298           54 IGEALQFLFDHNLVRAMKWELPLMWDYDLEKYARWWANQRKADCKLQHSFPEDNFKLGENIFWGSGSTWTPRDAVSVWAG  133 (195)
Q Consensus        54 ~~~~~~iL~~hN~~R~~~~~~~L~wd~~La~~A~~~a~~~~~~c~~~h~~~~~~~~~GeN~~~~~~~~~~~~~~v~~W~~  133 (195)
                      .+++++||+.||.+|+++|++||+||++|++.|+.||++|+.+|.+.|+....+..+|||++.+..+ ..+.++|+.|++
T Consensus         4 ~~f~~~il~~HN~~R~~~g~~pL~wd~~La~~A~~~A~~~a~~~~~~h~~~~~~~~~geni~~~~~~-~~~~~~v~~W~~   82 (149)
T d1smba_           4 KQFHNEVLKAHNEYRQKHGVPPLKLCKNLNREAQQYSEALASTRILKHSPESSRGQCGENLAWASYD-QTGKEVADRWYS   82 (149)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCCEECHHHHHHHHHHHHHHHHHCCCCCCHHHHTTSSEEEEEEESSC-CCHHHHHHHHHG
T ss_pred             HHHHHHHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHhhcccccccccccccccccCceeeecCCC-ccHHHHHHHHHH
Confidence            4689999999999999999999999999999999999999999999998776666789999976543 468899999999


Q ss_pred             hhccCCCCCCCCCCCCccchHHHHHHHhcCeEeEEEEEeCCCCEEEEEEccCCCCCCCCCCC
Q 029298          134 EEKYYTYATNTCQEGQQCGHYTQIVWKNTRRIGCARVVCDSGDVFMTCNYDPVGNYVGERPY  195 (195)
Q Consensus       134 e~~~~~~~~~~~~~~~~~~~ftqmiw~~t~~vGCa~~~c~~~~~~~vC~Y~p~gn~~g~~~Y  195 (195)
                      |..+|+|..+.+.  ..++|||||||+++++||||++.|.++++++||+|+|+||+.|+.+|
T Consensus        83 e~~~y~~~~~~~~--~~~ghftqmvw~~t~~vGCg~a~c~~~~~~~VC~Y~p~GN~~~~~~y  142 (149)
T d1smba_          83 EIKNYNFQQPGFT--SGTGHFTAMVWKNTKKMGVGKASASDGSSFVVARYFPAGNVVNEGFF  142 (149)
T ss_dssp             GGGGCCTTSCCCC--GGGHHHHHHHCTTCCEEEEEEEECTTSCEEEEEEEESCCCCCSTTHH
T ss_pred             HHhhcccCCCCcc--cccchhhheecCCceEeeEEEEEcCCCCEEEEEEeeCCCCcCCcccc
Confidence            9999999988765  56899999999999999999999998889999999999999999876

>d1rc9a1 d.111.1.1 (A:1-164) Cysteine-rich secretory protein (SteCRISP) {Chinese green tree viper (Trimeresurus stejnegeri) [TaxId: 39682]}

class: Alpha and beta proteins (a+b)
fold: PR-1-like
superfamily: PR-1-like
family: PR-1-like
domain: Cysteine-rich secretory protein (SteCRISP)
species: Chinese green tree viper (Trimeresurus stejnegeri) [TaxId: 39682]

Probab=100.00  E-value=9.2e-38  Score=229.70  Aligned_cols=138  Identities=33%  Similarity=0.567  Sum_probs=119.0

Q ss_pred             ChHHHHHHHHHHHHHHhhCCCC-----CCCchHHHHHHHHHHHHHhhhcCCcCCCCCCC----CCccceEEEEeeCCCCC
Q 029298           53 CIGEALQFLFDHNLVRAMKWEL-----PLMWDYDLEKYARWWANQRKADCKLQHSFPED----NFKLGENIFWGSGSTWT  123 (195)
Q Consensus        53 ~~~~~~~iL~~hN~~R~~~~~~-----~L~wd~~La~~A~~~a~~~~~~c~~~h~~~~~----~~~~GeN~~~~~~~~~~  123 (195)
                      ..+++++||+.||.+|++++.+     +|+||++|++.|+.||+    +|...|+....    ...+|||++.... ..+
T Consensus        11 ~~~~~~~il~~HN~~R~~~~~~a~~m~~L~Wd~~La~~A~~~a~----~c~~~~~~~~~~~~~~~~~g~n~~~~~~-~~~   85 (164)
T d1rc9a1          11 KPEIQNEIVDLHNSLRRSVNPTASNMLRMEWYPEAADNAERWAY----RCIESHSSYESRVIEGIKCGENIYMSPY-PMK   85 (164)
T ss_dssp             SHHHHHHHHHHHHHHHHTCSSCBSSCBCCEECHHHHHHHHHHHT----TTCCSCCCGGGGEETTEECEEEEEEESS-CCC
T ss_pred             CHHHHHHHHHHHHHHHHHcCCCcccccccccCHHHHHHHHHHHH----HHhhccCCcccccccccccceEEEEecC-CCC
Confidence            4568999999999999997644     59999999999999999    99988876543    2357999986543 356


Q ss_pred             hhhhHHHHHhhhccCCCCCCCCCCCCccchHHHHHHHhcCeEeEEEEEeCCC--CEEEEEEccCCCCCCCC--CCC
Q 029298          124 PRDAVSVWAGEEKYYTYATNTCQEGQQCGHYTQIVWKNTRRIGCARVVCDSG--DVFMTCNYDPVGNYVGE--RPY  195 (195)
Q Consensus       124 ~~~~v~~W~~e~~~~~~~~~~~~~~~~~~~ftqmiw~~t~~vGCa~~~c~~~--~~~~vC~Y~p~gn~~g~--~~Y  195 (195)
                      +.++|+.||+|..+|++..+.+..+..++|||||||+++++||||++.|.++  .+++||+|+|+||+.|+  .||
T Consensus        86 ~~~~v~~W~~E~~~~~~~~~~~~~~~~~ghftqmvW~~t~~vGCa~~~c~~~~~~~~vVC~Y~P~GN~~g~~~~~Y  161 (164)
T d1rc9a1          86 WTDIIHAWHDEYKDFKYGVGADPPNAVTGHYTQIVWYKSYRIGCAAAYCPSSPYSYFFVCQYCPAGNFIGKTATPY  161 (164)
T ss_dssp             HHHHHHHHHGGGGGEETTTEESSTTCCCHHHHHHTCTTCCEEEEEEEECTTSSSSEEEEEEEESCCCCTTCTTCSS
T ss_pred             HHHHHHHHhhhhheeecCCCCCCCcchhhHHHHHhhhcccEEeEEEEEeCCCCceEEEEEEEcCCCccCCCcCCCc
Confidence            8999999999999999998877777889999999999999999999999876  46899999999999998  456

>d1qnxa_ d.111.1.1 (A:) Insect allergen 5 (AG5) {Yellow jacket (Vespula vulgaris), Ves v 5 [TaxId: 7454]}

class: Alpha and beta proteins (a+b)
fold: PR-1-like
superfamily: PR-1-like
family: PR-1-like
domain: Insect allergen 5 (AG5)
species: Yellow jacket (Vespula vulgaris), Ves v 5 [TaxId: 7454]

Probab=100.00  E-value=5.2e-36  Score=228.35  Aligned_cols=141  Identities=30%  Similarity=0.542  Sum_probs=118.8

Q ss_pred             cCChHHHHHHHHHHHHHHhhC-----------------CCCCCCchHHHHHHHHHHHHHhhhcCCcCCCCCCC--CCccc
Q 029298           51 WGCIGEALQFLFDHNLVRAMK-----------------WELPLMWDYDLEKYARWWANQRKADCKLQHSFPED--NFKLG  111 (195)
Q Consensus        51 ~~~~~~~~~iL~~hN~~R~~~-----------------~~~~L~wd~~La~~A~~~a~~~~~~c~~~h~~~~~--~~~~G  111 (195)
                      ....++|+.||+.||++|+++                 +|.+|+||++||..||.||+    +|.+.|+.+..  .+.+|
T Consensus        40 ~~t~~~r~~iL~~HN~~R~~vA~G~~~~~~~~~~P~A~~M~~L~Wd~eLa~~A~~~a~----~C~~~~~~~~~~~~~~~G  115 (209)
T d1qnxa_          40 GLTKQEKQDILKEHNDFRQKIARGLETRGNPGPQPPAKNMKNLVWNDELAYVAQVWAN----QCQYGHDTCRDVAKYQVG  115 (209)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHHTTCCCCSTTCCCCCBSSCCCCEECHHHHHHHHHHHT----TCCCSCCSCCCCSSSCCE
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhcccccccccCCCCccccCccceECHHHHHHHHHHHh----hcccCCCcccCCCCCCCc
Confidence            345679999999999999862                 47789999999999999999    99999877543  34579


Q ss_pred             eEEEEeeCC---CCChhhhHHHHHhhhccCCCCCCCCCC-CCccchHHHHHHHhcCeEeEEEEEeCCCC---EEEEEEcc
Q 029298          112 ENIFWGSGS---TWTPRDAVSVWAGEEKYYTYATNTCQE-GQQCGHYTQIVWKNTRRIGCARVVCDSGD---VFMTCNYD  184 (195)
Q Consensus       112 eN~~~~~~~---~~~~~~~v~~W~~e~~~~~~~~~~~~~-~~~~~~ftqmiw~~t~~vGCa~~~c~~~~---~~~vC~Y~  184 (195)
                      ||++.....   ...+.++|+.|++|..+|++....+.. +..++|||||||+++++||||++.|..+.   +++||+|+
T Consensus       116 en~~~~~~~~~~~~~~~~~v~~W~~E~~~~~~~~~~~~~~~~~~ghftQmvw~~t~~VGCa~~~c~~~~~~~~~vVC~Y~  195 (209)
T d1qnxa_         116 QNVALTGSTAAKYDDPVKLVKMWEDEVKDYNPKKKFSGNDFLKTGHYTQMVWANTKEVGCGSIKYIQEKWHKHYLVCNYG  195 (209)
T ss_dssp             EEEEEEEESSSCCCCHHHHHHHHHGGGGGCCTTSCGGGSCHHHHHHHHHHTCTTCCEEEEEEEEEEETTEEEEEEEEEEE
T ss_pred             ceeeecccCCcCcccHHHHHHHHHHHhhhcCCCcccccCCccccchhHHHhhhhhCEEeEEEEEEcCCCCCEEEEEEEEC
Confidence            999865432   346889999999999999988765433 34699999999999999999999997654   48999999


Q ss_pred             CCCCCCCCCCC
Q 029298          185 PVGNYVGERPY  195 (195)
Q Consensus       185 p~gn~~g~~~Y  195 (195)
                      |+||+.|++||
T Consensus       196 p~GN~~g~~~Y  206 (209)
T d1qnxa_         196 PSGNFKNEELY  206 (209)
T ss_dssp             SCCCCTTSCSS
T ss_pred             CCCCCCCCCCC
Confidence            99999999999