Citrus Sinensis ID: 029380

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190----
Protein Sequence
MKIKLAAHFLLLLAFSAFMLSEAETQLKPHAIESFTVNYIQKFGNCTYLVVIKTSCDSKNFTRDRISIAFGDAYGNQIYAPRLDDPFTKTFQSCSSDGFQIDGPCATDICYVYLHRSGLDGWEPESVKIISPNSSPVTYDFNTSAPNEDWYGVNLCQIHPPPSPFEPSPPFPLNLRLLLHLLLISIAFPDCSGS
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccEEEEEEEEccccccccccEEEEEEEcccccEEEEEcccccccccccccccccEEEEccccccEEEEEEEEEcccccEEcEEEEEccccccEEEEEccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHHHHHHHHccccccccccccHcccHHHHccccccEEEEEEEEccccccccccEEEEEEEcccccEEEEcccccccccccccccccEEEEEccccccEEEEEEEEEccccccccEEEEEccccccEEEEEccccccccEEcccccccccccccccccccHHHHHHHHHHHHHHHHcccccccc
Coil and Loop (DISEMBL)
MKIKLAAHFLLLLAFSAFMLSEAetqlkphaieSFTVNYIQKFGNCTYLVVIKTscdsknftrdRISIAFgdaygnqiyaprlddpftktfqscssdgfqidgpcatdiCYVYLhrsgldgwepesvkiispnsspvtydfntsapnedwygvnlcqihpppspfepsppfplNLRLLLHLLLISIafpdcsgs
Flexible Loop (DISEMBL)
MKIKLAAHFLLLLAFSAFMLSEAETQLKPHAIESFTVNYIQKFGNCTYLVVIKTSCDSKNFTRDRISIAFGDAYGNQIYAPRLDDPFTKTFQSCSSDGFQIDGPCATDICYVYLHRSGLDGWEPESVKIISPNSSPVTYDFNTSAPNEDWYGVNLCQIHPPPSPFEPSPPFPLNLRLLLHLLLISIAFPDCSGS
Low Complexity Region (SEG)
MKIKlaahfllllafsafmlSEAETQLKPHAIESFTVNYIQKFGNCTYLVVIKTSCDSKNFTRDRISIAFGDAYGNQIYAPRLDDPFTKTFQSCSSDGFQIDGPCATDICYVYLHRSGLDGWEPESVKIISPNSSPVTYDFNTSAPNEDWYGVNLCQIHpppspfepsppfplnlrlllhlllISIAFPDCSGS
Disordered region (IsUnstruct)
***KLAAHFLLLLAFSAFMLSEAETQLKPHAIESFTVNYIQKFGNCTYLVVIKTSCDSKNFTRDRISIAFGDAYGNQIYAPRLDDPFTKTFQSCSSDGFQIDGPCATDICYVYLHRSGLDGWEPESVKIISPN*SPVTYDFNTSAPNEDWYGVNLCQIH***********FPLNLRLLLHLLLISIAFPD****
Disordered Region (DISOPRED)
***KLAAHFLLLLAFSAFM***********************FGNCTYLVVIKTSCDSKNFTRDRISIAFGDAYGNQIYAPRLDDPFTKTFQSCSSDGFQIDGPCATDICYVYLHRSGLDGWEPESVKIISPNSSPVTYDFNTSAPNEDWYGVNLC****************LNLRLLLHLLLISIAFPDCS**
Disordered Region (DISEMBL)
MKIKLAAHFLLLLAFSAFMLSEAETQLKPHAIESFTVNYIQKFGNCTYLVVIKTSCDSKNFTRDRISIAFGDAYGNQIYAPRLDDPFTKTFQSCSSDGFQIDGPCATDICYVYLHRSGLDGWEPESVKIISPNSSPVTYDFNTSAPNEDWYGVNLCQIHPPPSPFEPSPPFPLNLRLLLHLLLISIAFPDCSGS
Disordered Region (DISPRO)
MKIKLAAHFLLLLAFSAFMLSEAETQLKPHAIESFTVNYIQKFGNCTYLVVIKTSCDSKNFTRDRISIAFGDAYGNQIYAPRLDDPFTKTFQSCSSDGFQIDGPCATDICYVYLHRSGLDGWEPESVKIISPNSSPVTYDFNTSAPNEDWYGVNLCQIHPPPSPFEPSPPFPLNLRLLLHLLLISIAFPDC***
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MKIKLAAHFLLLLAFSAFMLSEAETQLKPHAIESFTVNYIQKFGNCTYLVVIKTSCDSKNFTRDRISIAFGDAYGNQIYAPRLDDPFTKTFQSCSSDGFQIDGPCATDICYVYLHRSGLDGWEPESVKIISPNSSPVTYDFNTSAPNEDWYGVNLCQIHPPPSPFEPSPPFPLNLRLLLHLLLISIAFPDCSGS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	194
351721024	189	uncharacterized protein LOC100499779 pre	0.896	0.920	0.576	5e-49
351727573	188	uncharacterized protein LOC100499692 pre	0.788	0.813	0.641	1e-48
351725853	187	uncharacterized protein LOC100305526 pre	0.876	0.909	0.548	3e-47
356559905	188	PREDICTED: uncharacterized protein LOC10	0.783	0.808	0.611	6e-47
297797187	188	hypothetical protein ARALYDRAFT_496397 [	0.891	0.920	0.516	9e-46
388514213	191	unknown [Lotus japonicus]	0.798	0.811	0.580	3e-45
388504914	194	unknown [Medicago truncatula]	0.829	0.829	0.553	2e-44
388491126	194	unknown [Medicago truncatula]	0.829	0.829	0.553	2e-44
388519799	189	unknown [Medicago truncatula]	0.829	0.851	0.572	3e-44
388504722	189	unknown [Medicago truncatula]	0.706	0.724	0.633	4e-44

>gi|351721024|ref|NP_001235916.1| uncharacterized protein LOC100499779 precursor [Glycine max] gi|255626469|gb|ACU13579.1| unknown [Glycine max]

 Score =  199 bits (506), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 106/184 (57%), Positives = 125/184 (67%), Gaps = 10/184 (5%)

Query: 10  LLLLAF-SAFMLSEAETQ---LKPHAIESFTVNYIQ--KFGNCTYLVVIKTSCDSKNFTR 63
           L L  F SA  LS +E++   ++PHA ESF+V YIQ     NC+YLVVI TSC S  FT 
Sbjct: 6   LFLFCFASALTLSVSESKSASVQPHAAESFSVGYIQMKTAANCSYLVVISTSCSSPKFTT 65

Query: 64  DRISIAFGDAYGNQIYAPRLDDPFTKTFQSCSSDGFQIDGPCATDICYVYLHRSGL-DGW 122
           D+I I FGDAYGNQ+Y PRLDDP ++TF+ CSSD FQIDG CA+ ICYVYL+RSG  +GW
Sbjct: 66  DKIGITFGDAYGNQVYEPRLDDPISRTFEQCSSDTFQIDGACASPICYVYLYRSGAEEGW 125

Query: 123 EPESVKIISPNSSPVTYDFNTSAPNEDWYGVNLCQIHPPPSPFEPSPP---FPLNLRLLL 179
           EPESVKI   NS PVT+DFNTS PN  WYG NLC+  P  S  +  P      L L  +L
Sbjct: 126 EPESVKIYGYNSEPVTFDFNTSIPNGTWYGYNLCETPPSSSSHQLFPQKWLMSLVLGFVL 185

Query: 180 HLLL 183
             LL
Sbjct: 186 SFLL 189

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351727573|ref|NP_001238445.1| uncharacterized protein LOC100499692 precursor [Glycine max] gi|255625831|gb|ACU13260.1| unknown [Glycine max]

 Score =  197 bits (502), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 102/159 (64%), Positives = 116/159 (72%), Gaps = 6/159 (3%)

Query: 3   IKLAAHFLLLLAFSAFMLSEAETQ---LKPHAIESFTVNYIQ--KFGNCTYLVVIKTSCD 57
           IK     LL LA S   LS +ET+   L PHA ESF V+YIQ    G C+YLVVI TSC 
Sbjct: 2   IKQVLLVLLFLA-SGLTLSVSETESVSLLPHAAESFNVSYIQMKNAGTCSYLVVISTSCS 60

Query: 58  SKNFTRDRISIAFGDAYGNQIYAPRLDDPFTKTFQSCSSDGFQIDGPCATDICYVYLHRS 117
           S  +TRD+ISI+FGDAYGNQIYAPRLDDP + TF+SCSSD FQI GPCA  ICYVYL+RS
Sbjct: 61  SPRYTRDQISISFGDAYGNQIYAPRLDDPASGTFESCSSDTFQITGPCAYQICYVYLYRS 120

Query: 118 GLDGWEPESVKIISPNSSPVTYDFNTSAPNEDWYGVNLC 156
           GLDGW+PESVKI S N   VT+ +NT  P + WYG NLC
Sbjct: 121 GLDGWKPESVKINSYNGRAVTFYYNTYIPRDTWYGFNLC 159

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351725853|ref|NP_001236595.1| uncharacterized protein LOC100305526 precursor [Glycine max] gi|255625801|gb|ACU13245.1| unknown [Glycine max]

 Score =  193 bits (490), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 101/184 (54%), Positives = 128/184 (69%), Gaps = 14/184 (7%)

Query: 10  LLLLAFSAFM-LSEAETQ---LKPHAIESFTVNYIQ--KFGNCTYLVVIKTSCDSKNFTR 63
           L L  F++ + LS +E++   ++PHA ESF+V YIQ     NC+YLVVI TSC S  FT 
Sbjct: 6   LFLFCFASVLTLSVSESKSASVQPHAAESFSVGYIQMKTAANCSYLVVISTSCSSPKFTT 65

Query: 64  DRISIAFGDAYGNQIYAPRLDDPFTKTFQSCSSDGFQIDGPCATDICYVYLHRSGL-DGW 122
           D+I I FGDA GNQ+Y PRLDDP ++TF+ CSSD FQIDG CA+ ICYVYL+RSG  +GW
Sbjct: 66  DKIGITFGDANGNQVYEPRLDDPISRTFEQCSSDTFQIDGACASPICYVYLYRSGAEEGW 125

Query: 123 EPESVKIISPNSSPVTYDFNTSAPNEDWYGVNLCQIHPPPSPFEPSPPFPLNLRLLLHLL 182
           EPESVKI   NS P+T+DFNTS PN  WYG NLC+   P S ++ SP      +  + L+
Sbjct: 126 EPESVKIYGYNSEPITFDFNTSIPNGTWYGYNLCET--PSSSYQLSPQ-----KWFMSLV 178

Query: 183 LISI 186
           L S+
Sbjct: 179 LGSV 182

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356559905|ref|XP_003548236.1| PREDICTED: uncharacterized protein LOC100781972 [Glycine max]

 Score =  192 bits (488), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 99/162 (61%), Positives = 116/162 (71%), Gaps = 10/162 (6%)

Query: 3   IKLAAHFLLLLAF-SAFMLSEAETQ---LKPHAIESFTVNYIQ--KFGNCTYLVVIKTSC 56
           IKL    L L  F SA  LS +E++   + PHA ESF+V YIQ     NC+YLVVI TSC
Sbjct: 2   IKLV---LFLFCFASALTLSVSESKSASVHPHAAESFSVEYIQMKTAANCSYLVVISTSC 58

Query: 57  DSKNFTRDRISIAFGDAYGNQIYAPRLDDPFTKTFQSCSSDGFQIDGPCATDICYVYLHR 116
            S  FT D+I I FGD+YGNQ+Y PRLDDP ++TF+ CSSD FQIDG CA+ ICYVYL+R
Sbjct: 59  SSPKFTADKIGITFGDSYGNQVYEPRLDDPISRTFEQCSSDTFQIDGACASPICYVYLYR 118

Query: 117 SGL-DGWEPESVKIISPNSSPVTYDFNTSAPNEDWYGVNLCQ 157
           SG  +GWEPESVKI   NS P T+DFNTS PN  WYG NLC+
Sbjct: 119 SGAEEGWEPESVKIYGYNSEPTTFDFNTSIPNGTWYGYNLCE 160

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297797187|ref|XP_002866478.1| hypothetical protein ARALYDRAFT_496397 [Arabidopsis lyrata subsp. lyrata] gi|297312313|gb|EFH42737.1| hypothetical protein ARALYDRAFT_496397 [Arabidopsis lyrata subsp. lyrata]

 Score =  188 bits (478), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 94/182 (51%), Positives = 123/182 (67%), Gaps = 9/182 (4%)

Query: 5   LAAHFLLLLAFSAFM-LSEAETQ-LKPHAIESFTVNYIQKFGN-CTYLVVIKTSCDSKNF 61
           ++     L++F+ F+ +S +E++ L+PH  ESF V+ IQ+ GN C+Y V+I TSC S  +
Sbjct: 2   VSVRLFTLISFAFFIFISVSESKVLEPHVAESFNVSLIQRLGNTCSYTVIISTSCSSTRY 61

Query: 62  TRDRISIAFGDAYGNQIYAPRLDDPFTKTFQSCSSDGFQIDGPCATDICYVYLHRSGLDG 121
           TRD+IS+AFGD YGNQIYAPRLDDP TKTF+ CSSD FQI+GPC   ICYVYL+RSG DG
Sbjct: 62  TRDQISVAFGDGYGNQIYAPRLDDPSTKTFEQCSSDTFQINGPCTYQICYVYLYRSGPDG 121

Query: 122 WEPESVKIISPNSSPVTYDFNTSAPNEDWYGVNLCQIHPPPSPFEPSPPFPLNLRLLLHL 181
           W P+SVKI S  S  VT+ +NT  P   WYG N C      +    S    + LR ++ +
Sbjct: 122 WIPDSVKIFSHGSKAVTFSYNTHVPESVWYGFNYC------NRASDSNVLAIGLRRIVII 175

Query: 182 LL 183
           LL
Sbjct: 176 LL 177

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388514213|gb|AFK45168.1| unknown [Lotus japonicus]

 Score =  186 bits (473), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 94/162 (58%), Positives = 113/162 (69%), Gaps = 7/162 (4%)

Query: 9   FLLLLAFSAFMLSEAETQ----LKPHAIESFTVNYIQKFG--NCTYLVVIKTSCDSKNFT 62
           FLL    S   LS +E++    L+PH  E F V YIQ     NC+YLV+I TSC S  FT
Sbjct: 6   FLLFCFVSGLTLSVSESKSASMLQPHVAEDFDVGYIQMKSEHNCSYLVMITTSCSSPKFT 65

Query: 63  RDRISIAFGDAYGNQIYAPRLDDPFTKTFQSCSSDGFQIDGPCATDICYVYLHRSGLD-G 121
            D+ISIAFGD  GNQ+YAPRLDDP +KTF+ CSSD FQIDG CA+ ICYVYL+RSG + G
Sbjct: 66  TDKISIAFGDDQGNQVYAPRLDDPISKTFEQCSSDSFQIDGACASPICYVYLYRSGSENG 125

Query: 122 WEPESVKIISPNSSPVTYDFNTSAPNEDWYGVNLCQIHPPPS 163
           W+PESVKI   ++ P T+ FNT  PN+ WYG NLC+   PPS
Sbjct: 126 WKPESVKIFGFDAEPTTFKFNTPIPNDTWYGYNLCETPSPPS 167

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388504914|gb|AFK40523.1| unknown [Medicago truncatula]

 Score =  184 bits (467), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 93/168 (55%), Positives = 115/168 (68%), Gaps = 7/168 (4%)

Query: 3   IKLAAHFLLLLAFSAFMLSEAET--QLKPHAIESFTVNYIQKFG--NCTYLVVIKTSCDS 58
           +K+      L     F +SE+++   L+PHA+ESF V YIQ  G  NC+YLV+I TSC S
Sbjct: 2   MKMVLLLFCLATALTFKVSESKSAVSLQPHALESFDVGYIQMKGAENCSYLVMITTSCSS 61

Query: 59  KNFTRDRISIAFGDAYGNQIYAPRLDDPFTKTFQSCSSDGFQIDGPCATDICYVYLHRSG 118
             FT D+ISIAFGDA GNQ+YA RLDDP + TF+ CSSD FQ+DGPCA+ IC+ YL+RSG
Sbjct: 62  PKFTTDKISIAFGDASGNQVYAARLDDPKSGTFEQCSSDSFQLDGPCASPICFAYLYRSG 121

Query: 119 L---DGWEPESVKIISPNSSPVTYDFNTSAPNEDWYGVNLCQIHPPPS 163
                GWEPESVKI   NS  VT+ FN+S P++ WYG N C    PPS
Sbjct: 122 STDNKGWEPESVKIYGYNSDAVTFTFNSSIPSDTWYGYNYCDTPSPPS 169

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388491126|gb|AFK33629.1| unknown [Medicago truncatula]

 Score =  184 bits (466), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 93/168 (55%), Positives = 115/168 (68%), Gaps = 7/168 (4%)

Query: 3   IKLAAHFLLLLAFSAFMLSEAET--QLKPHAIESFTVNYIQKFG--NCTYLVVIKTSCDS 58
           +K+      L     F +SE+++   L+PHA+ESF V YIQ  G  NC+YLV+I TSC S
Sbjct: 2   MKMVLLLFCLATALTFKVSESKSAVSLQPHALESFDVGYIQMKGAENCSYLVMITTSCSS 61

Query: 59  KNFTRDRISIAFGDAYGNQIYAPRLDDPFTKTFQSCSSDGFQIDGPCATDICYVYLHRSG 118
             FT D+ISIAFGDA GNQ+YA RLDDP + TF+ CSSD FQ+DGPCA+ IC+ YL+RSG
Sbjct: 62  PKFTTDKISIAFGDASGNQVYAARLDDPKSGTFEQCSSDSFQLDGPCASPICFAYLYRSG 121

Query: 119 L---DGWEPESVKIISPNSSPVTYDFNTSAPNEDWYGVNLCQIHPPPS 163
                GWEPESVKI   NS  VT+ FN+S P++ WYG N C    PPS
Sbjct: 122 STDNKGWEPESVKIYGYNSDAVTFTFNSSIPSDTWYGYNYCGTPSPPS 169

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388519799|gb|AFK47961.1| unknown [Medicago truncatula]

 Score =  183 bits (464), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 95/166 (57%), Positives = 118/166 (71%), Gaps = 5/166 (3%)

Query: 20  LSEAET-QLKPHAIESFTVNYIQ--KFGNCTYLVVIKTSCDSKNFTRDRISIAFGDAYGN 76
           +SE+++  L PHA ESF ++YIQ    G+C+Y VVI TSC S  +T D+ISIAFGDAYGN
Sbjct: 22  VSESQSVSLLPHANESFNISYIQMKNAGSCSYFVVISTSCSSPRYTSDQISIAFGDAYGN 81

Query: 77  QIYAPRLDDPFTKTFQSCSSDGFQIDGPCATDICYVYLHRSGLDGWEPESVKIISPNSSP 136
           QIYAPRLDDP + TF+SCSSD FQI+GPCA  ICYVYL+RSG  GW+PESVKI   N  P
Sbjct: 82  QIYAPRLDDPSSGTFESCSSDTFQINGPCAYQICYVYLYRSGSSGWKPESVKINGYNGEP 141

Query: 137 VTYDFNTSAPNEDWYGVNLCQIHPPPSPFEPSPPFPLNLRLLLHLL 182
           VT+ +NT  P + WYG NLC  +   S ++ S    L L +L  +L
Sbjct: 142 VTFYYNTFIPRDTWYGFNLC--NDAASSYKVSAQKWLILVILGFVL 185

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388504722|gb|AFK40427.1| unknown [Medicago truncatula]

 Score =  183 bits (464), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 90/142 (63%), Positives = 107/142 (75%), Gaps = 5/142 (3%)

Query: 21  SEAETQ---LKPHAIESFTVNYIQ--KFGNCTYLVVIKTSCDSKNFTRDRISIAFGDAYG 75
           SE+E+Q   L PHA ESF ++YIQ    G+C+Y VVI TSC S  +T D+ISIAFGDAYG
Sbjct: 21  SESESQSVSLLPHANESFNISYIQMKNAGSCSYFVVISTSCSSPRYTSDQISIAFGDAYG 80

Query: 76  NQIYAPRLDDPFTKTFQSCSSDGFQIDGPCATDICYVYLHRSGLDGWEPESVKIISPNSS 135
           NQIYAPRLDDP + TF+SCSSD FQI+GPCA  ICYVYL+RSG  GW+PESVKI   +  
Sbjct: 81  NQIYAPRLDDPSSGTFESCSSDTFQINGPCAYQICYVYLYRSGSSGWKPESVKINGYSGE 140

Query: 136 PVTYDFNTSAPNEDWYGVNLCQ 157
           PVT+ +NT  P + WYG NLC 
Sbjct: 141 PVTFYYNTFIPRDTWYGFNLCN 162

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	194
TAIR|locus:2167908	190	AT5G62200 "AT5G62200" [Arabido	0.659	0.673	0.643	1.3e-43
TAIR|locus:4515102981	179	AT2G41475 "AT2G41475" [Arabido	0.664	0.720	0.515	7.2e-36
TAIR|locus:2167928	223	AT5G62210 "AT5G62210" [Arabido	0.577	0.502	0.491	6.4e-28
TAIR|locus:2182865	213	ATS3 "AT5G07190" [Arabidopsis	0.634	0.577	0.460	7.6e-25

TAIR|locus:2167908 AT5G62200 "AT5G62200" [Arabidopsis thaliana (taxid:3702)]

 Score = 460 (167.0 bits), Expect = 1.3e-43, P = 1.3e-43
 Identities = 83/129 (64%), Positives = 94/129 (72%)

Query:    29 PHAIESFTVNYIQKFGN-CTYLVVIKTSCDSKNFTRDRISIAFGDAYGNQIYAPRLDDPF 87
             PH  ESF V+ IQK GN C Y V+I TSC S  +TRD+IS+AFGD YGNQIYAPRLDDP 
Sbjct:    30 PHVAESFNVSLIQKLGNTCAYTVIISTSCSSTRYTRDQISVAFGDGYGNQIYAPRLDDPS 89

Query:    88 TKTFQSCSSDGFQIDGPCATDICYVYLHRSGLDGWEPESVKIISPNSSPVTYDFNTSAPN 147
             TKTF+ CSSD FQI+GPC   ICYVYL+RSG DGW P +VKI S  S  VT+ +NT  P 
Sbjct:    90 TKTFEQCSSDTFQINGPCTYQICYVYLYRSGPDGWIPNTVKIYSHGSKAVTFPYNTYVPE 149

Query:   148 EDWYGVNLC 156
               WYG N C
Sbjct:   150 SVWYGFNYC 158

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0031225 "anchored to membrane" evidence=TAS

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0009611 "response to wounding" evidence=RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA

TAIR|locus:4515102981 AT2G41475 "AT2G41475" [Arabidopsis thaliana (taxid:3702)]

 Score = 387 (141.3 bits), Expect = 7.2e-36, P = 7.2e-36
 Identities = 67/130 (51%), Positives = 91/130 (70%)

Query:    28 KPHAIESFTVN-YIQKFGNCTYLVVIKTSCDSKNFTRDRISIAFGDAYGNQIYAPRLDDP 86
             KP  I+SF     ++    C+Y V+IKTSC S ++TRD+ISI+FGD YGN++Y  RLDDP
Sbjct:    29 KPLPIDSFIPKPKLENAAACSYTVIIKTSCSSVSYTRDKISISFGDVYGNEVYVKRLDDP 88

Query:    87 FTKTFQSCSSDGFQIDGPCATDICYVYLHRSGLDGWEPESVKIISPNSSPVTYDFNTSAP 146
              ++TF+ CSSD ++I GPC  D+CY+YL R G DGW+PE+VKI   +   VT+ +N   P
Sbjct:    89 SSRTFEKCSSDTYKISGPCMRDVCYLYLLRQGSDGWKPENVKIYGSSIRSVTFYYNLFLP 148

Query:   147 NEDWYGVNLC 156
             N  WYG N+C
Sbjct:   149 NSVWYGFNVC 158

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2167928 AT5G62210 "AT5G62210" [Arabidopsis thaliana (taxid:3702)]

 Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
 Identities = 56/114 (49%), Positives = 75/114 (65%)

Query:    45 NCTYLVVIKTSCDSKNFTRDRISIAFGDAYGNQIYAPRLDDPFTKT--FQSCSSDGFQID 102
             +C Y V++ TSC S +++RD+++IA GDA  NQ+ APRLD P +    F+ CSSD FQ+ 
Sbjct:    39 SCPYTVIVTTSCFSPDWSRDQVTIALGDADDNQVVAPRLDKPLSGGGGFEKCSSDTFQVK 98

Query:   103 GPCATDICYVYLHRSGLDGWEPESVKIISPNSSPVTYDFNTSAPNEDWYGVNLC 156
             G C   IC VY++RSG DGW PE+V+I    S  V +DFN + P   WYG N C
Sbjct:    99 GKCLNTICSVYIYRSGTDGWIPETVEIYKEGSKSVKFDFNKNVPENIWYGNNYC 152

GO:0003674 "molecular_function" evidence=ND

GO:0031225 "anchored to membrane" evidence=TAS

GO:0080167 "response to karrikin" evidence=IEP

GO:0009611 "response to wounding" evidence=RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA

GO:0009718 "anthocyanin-containing compound biosynthetic process" evidence=RCA

GO:0009744 "response to sucrose stimulus" evidence=RCA

GO:0010224 "response to UV-B" evidence=RCA

TAIR|locus:2182865 ATS3 "AT5G07190" [Arabidopsis thaliana (taxid:3702)]

 Score = 283 (104.7 bits), Expect = 7.6e-25, P = 7.6e-25
 Identities = 59/128 (46%), Positives = 79/128 (61%)

Query:    34 SFTVNYIQ-KFGNCTYLVVIKTSCDSKNFTRDRISIAFGDAYGNQIYAPRLDDPFTKT-- 90
             +F ++ IQ + G C Y VV+ TSC S   TRD+ISI FGDA GN++YAP+L         
Sbjct:    21 AFDLSIIQMQQGTCPYTVVVMTSCLSPESTRDQISIVFGDADGNKVYAPKLGGLVRGPGG 80

Query:    91 FQSCSSDGFQIDGPCATD-ICYVYLHRSGLDGWEPESVKIISPNSSPVTYDFNTSAPN-E 148
                CS++ FQ+ G C  D IC +Y++R+G DGW PES++I S  S  V +DF+ S P   
Sbjct:    81 LGKCSTNTFQVRGQCLNDPICSLYINRNGPDGWVPESIEIYSEGSKSVKFDFSKSVPQLN 140

Query:   149 DWYGVNLC 156
              WYG N C
Sbjct:   141 TWYGHNNC 148


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.135   0.429    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      194       154   0.00088  105 3  11 22  0.50    31
                                                     30  0.41    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  600 (64 KB)
  Total size of DFA:  166 KB (2098 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  15.06u 0.12s 15.18t   Elapsed:  00:00:00
  Total cpu time:  15.06u 0.12s 15.18t   Elapsed:  00:00:00
  Start:  Mon May 20 22:18:34 2013   End:  Mon May 20 22:18:34 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0005634 "nucleus" evidence=ISM

GO:0009793 "embryo development ending in seed dormancy" evidence=RCA;TAS

GO:0031225 "anchored to membrane" evidence=TAS

GO:0016020 "membrane" evidence=IDA

GO:0009737 "response to abscisic acid stimulus" evidence=RCA

GO:0009845 "seed germination" evidence=RCA

GO:0010162 "seed dormancy process" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	194
pfam06232	126	pfam06232, ATS3, Embryo-specific protein 3, (ATS3)	1e-54
cd00113	116	cd00113, PLAT, PLAT (Polycystin-1, Lipoxygenase, A	2e-22

>gnl|CDD|218949 pfam06232, ATS3, Embryo-specific protein 3, (ATS3)

 Score =  169 bits (430), Expect = 1e-54
 Identities = 65/117 (55%), Positives = 80/117 (68%), Gaps = 1/117 (0%)

Query: 41  QKFGNCTYLVVIKTSCDSKNFTRDRISIAFGDAYGNQIYAPRLDDPFT-KTFQSCSSDGF 99
               +C+Y V+IKTSC S  +T D+ISIAFGDAYGNQ+Y PRLDDP +   F+ C++D F
Sbjct: 10  LAGSSCSYTVIIKTSCSSPAYTTDQISIAFGDAYGNQVYVPRLDDPSSGGGFERCTTDTF 69

Query: 100 QIDGPCATDICYVYLHRSGLDGWEPESVKIISPNSSPVTYDFNTSAPNEDWYGVNLC 156
           Q+ GPC   ICY+YL+RSG DGW PE+V I      PVT+ FNT  P   WYG N C
Sbjct: 70  QVSGPCTYPICYLYLYRSGTDGWIPETVTIYGYGYPPVTFYFNTFLPEGVWYGFNYC 126

Family of plant seed-specific proteins. Length = 126

>gnl|CDD|238061 cd00113, PLAT, PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology 2) domain

 Score = 87.0 bits (216), Expect = 2e-22
 Identities = 40/117 (34%), Positives = 48/117 (41%), Gaps = 9/117 (7%)

Query: 46  CTYLVVIKTSCDSKNFTRDRISIAFGDAYGNQIYAPRLDDPFTKTFQSCSSDGFQIDGPC 105
           C Y V IKT       T   IS+A     GN    P LD P   +F+  S+D FQID   
Sbjct: 1   CRYTVTIKTGDKKGAGTDSNISLALYGENGNSSDIPILDGPG--SFERGSTDTFQIDLKL 58

Query: 106 AT-DICYVYLHRSG---LDGWEPESVKIISPNSSPVTYDF--NTSAPNEDWYGVNLC 156
              DI  VYL R G    DGW  ES+ + +   +   Y F  N       WY     
Sbjct: 59  DIGDITKVYLRRDGSGLSDGWYCESITVQA-LGTKKVYTFPVNRWVLGGKWYTSVRS 114

It consists of an eight stranded beta-barrel. The domain can be found in various domain architectures, in case of lipoxygenases, alpha toxin, lipases and polycystin, but also as a single domain or as repeats.The putative function of this domain is to facilitate access to sequestered membrane or micelle bound substrates. Length = 116

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	194
PF06232	125	ATS3: Embryo-specific protein 3, (ATS3); InterPro:	100.0
cd00113	116	PLAT PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin	99.86
cd01754	129	PLAT_plant_stress PLAT/LH2 domain of plant-specifi	99.81
cd01753	113	PLAT_LOX PLAT domain of 12/15-lipoxygenase. As a u	99.66
cd01756	120	PLAT_repeat PLAT/LH2 domain repeats of family of p	99.61
cd01752	120	PLAT_polycystin PLAT/LH2 domain of polycystin-1 li	99.57
cd02899	109	PLAT_SR Scavenger receptor protein. A subfamily of	99.49
smart00308	105	LH2 Lipoxygenase homology 2 (beta barrel) domain.	99.44
PF01477	113	PLAT: PLAT/LH2 domain; InterPro: IPR001024 Lipoxyg	99.33
cd01757	114	PLAT_RAB6IP1 PLAT/LH2 domain present in RAB6 inter	98.81
cd01755	120	PLAT_lipase PLAT/ LH2 domain present in connection	97.77
cd01758	137	PLAT_LPL PLAT/ LH2 domain present in lipoprotein l	96.61

>PF06232 ATS3: Embryo-specific protein 3, (ATS3); InterPro: IPR010417 This is a family of plant seed-specific proteins identified in Arabidopsis thaliana (Mouse-ear cress)

Probab=100.00  E-value=5.4e-59  Score=370.44  Aligned_cols=115  Identities=61%  Similarity=1.125  Sum_probs=113.1

Q ss_pred             ccCCceEEEEEEecCCCCccCCceeEEEEecCCCCeEEecCCCCCCC-CCccCccccceeeecCCcccccEEEEEEeCCC
Q 029380           42 KFGNCTYLVVIKTSCDSKNFTRDRISIAFGDAYGNQIYAPRLDDPFT-KTFQSCSSDGFQIDGPCATDICYVYLHRSGLD  120 (194)
Q Consensus        42 ~~~~C~YtV~IkTsC~s~a~T~d~ISl~FgDa~Gn~V~v~~Ld~p~~-~~FErCs~DtF~v~GpCl~~IC~lyL~r~G~d  120 (194)
                      ++++|+|||+|||||+|+|+|+|+|||+||||+||+||++|||+|++ ++||||++|+|+|+|||+++||||||+|+|+|
T Consensus        10 ~~~~CsYtv~IkTsC~s~a~T~d~Isi~FgDa~Gn~v~~~~Ld~p~~~~~FErCs~DtF~v~G~C~~~IC~lyL~r~G~d   89 (125)
T PF06232_consen   10 QAGSCSYTVTIKTSCSSPAGTDDQISIAFGDAYGNQVYVPRLDDPGSGDTFERCSTDTFQVTGPCLYQICYLYLYRSGSD   89 (125)
T ss_pred             cCCCCcEEEEEEeCcCCCcCCcceEEEEEecCCCCEEEEccCCCCCccCchhcCCcceeEeecccCCcccEEEEEEccCC
Confidence            46789999999999999999999999999999999999999999998 99999999999999999999999999999999


Q ss_pred             CceecEEEEecCCCCceeEEecccCCCCCceeeccC
Q 029380          121 GWEPESVKIISPNSSPVTYDFNTSAPNEDWYGVNLC  156 (194)
Q Consensus       121 GW~pe~V~V~~~~~~~vtF~f~~~LP~~vwyG~N~C  156 (194)
                      ||+||||+||+++++|++||||+|||+++|||||+|
T Consensus        90 GW~Pe~V~Iy~~~~~~~~F~~~~~lp~~vwyG~n~C  125 (125)
T PF06232_consen   90 GWKPEWVQIYGSGSKPVTFYFNTFLPNGVWYGFNYC  125 (125)
T ss_pred             CCEeCeEEEEEcCCCCeEEECCCcCCCCCcccccCC
Confidence            999999999999999999999999999999999999

ATS3 is expressed in a pattern similar to the Arabidopsis seed storage protein genes [].

>cd00113 PLAT PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology 2) domain

Probab=99.86  E-value=5.5e-21  Score=143.09  Aligned_cols=109  Identities=35%  Similarity=0.472  Sum_probs=99.1

Q ss_pred             ceEEEEEEecCCCCccCCceeEEEEecCCCCeEEecCCCCCCCCCccCccccceeeecC-CcccccEEEEEEeCCC---C
Q 029380           46 CTYLVVIKTSCDSKNFTRDRISIAFGDAYGNQIYAPRLDDPFTKTFQSCSSDGFQIDGP-CATDICYVYLHRSGLD---G  121 (194)
Q Consensus        46 C~YtV~IkTsC~s~a~T~d~ISl~FgDa~Gn~V~v~~Ld~p~~~~FErCs~DtF~v~Gp-Cl~~IC~lyL~r~G~d---G  121 (194)
                      |.|+|+|+||+...|||+++|.|.+.++.|++..+..+++++.  |||+++|+|.|..+ .++.|++|.|.++++.   +
T Consensus         1 ~~Y~v~V~Tg~~~~agT~~~v~i~l~g~~g~s~~~~l~~~~~~--f~~g~~~~f~v~~~~~lG~i~~v~l~~d~~g~~~~   78 (116)
T cd00113           1 CRYTVTIKTGDKKGAGTDSNISLALYGENGNSSDIPILDGPGS--FERGSTDTFQIDLKLDIGDITKVYLRRDGSGLSDG   78 (116)
T ss_pred             CEEEEEEEECCCCCCCccCEEEEEEEeCCCCcccEEccCCCCc--ccCCCceEEEEeccCCCcCeEEEEEEECCCCCCCC
Confidence            7899999999999999999999999999999999887765543  99999999999999 6699999999999884   9


Q ss_pred             ceecEEEEecCCC-CceeEEecccCCCCCceeeccC
Q 029380          122 WEPESVKIISPNS-SPVTYDFNTSAPNEDWYGVNLC  156 (194)
Q Consensus       122 W~pe~V~V~~~~~-~~vtF~f~~~LP~~vwyG~N~C  156 (194)
                      |++++|+|..... ....|.++.||..+.++..++|
T Consensus        79 W~l~~V~V~~~~~~~~~~F~~~~Wl~~~~~~~~~r~  114 (116)
T cd00113          79 WYCESITVQALGTKKVYTFPVNRWVLGGKWYTSVRS  114 (116)
T ss_pred             EEEeEEEEEeCCCCCEEEEEeCCCcccCCCCCceee
Confidence            9999999997654 7799999999999998887765

It consists of an eight stranded beta-barrel. The domain can be found in various domain architectures, in case of lipoxygenases, alpha toxin, lipases and polycystin, but also as a single domain or as repeats.The putative function of this domain is to facilitate access to sequestered membrane or micelle bound substrates.

>cd01754 PLAT_plant_stress PLAT/LH2 domain of plant-specific single domain protein family with unknown function

Probab=99.81  E-value=2.7e-19  Score=142.32  Aligned_cols=109  Identities=24%  Similarity=0.346  Sum_probs=94.1

Q ss_pred             ceEEEEEEecCCCCccCCceeEEEEecCCCCeEEecCCC------CCCCCCccCccccceeeecCCc-ccccEEEEEEeC
Q 029380           46 CTYLVVIKTSCDSKNFTRDRISIAFGDAYGNQIYAPRLD------DPFTKTFQSCSSDGFQIDGPCA-TDICYVYLHRSG  118 (194)
Q Consensus        46 C~YtV~IkTsC~s~a~T~d~ISl~FgDa~Gn~V~v~~Ld------~p~~~~FErCs~DtF~v~GpCl-~~IC~lyL~r~G  118 (194)
                      |.|+|+|+||....|||+++|+|.+.+..|+...+..++      +++.+.|||+++|+|.|..++. ++||++.|.+|+
T Consensus         1 ~~Y~I~V~TG~~~gAGTdanV~i~l~G~~G~s~~~~l~~~~~~l~~~~~~~FerG~~d~F~v~~~~~lG~l~~irI~HDn   80 (129)
T cd01754           1 CVYTIYVQTGSIWKAGTDSRISLQIYDADGPGLRIANLEAWGGLMGAGHDYFERGNLDRFSGRGPCLPSPPCWMNLTSDG   80 (129)
T ss_pred             CEEEEEEEECCCcccCCcceEEEEEEeCCCCcccEEcccccccccccccccccCCCccEEEEEeccCCCCeEEEEEEECC
Confidence            899999999999999999999999999999998887654      3567899999999999999986 899999999996


Q ss_pred             C---CCceecEEEEecCC----CCceeEEecccC-----CCCCceeec
Q 029380          119 L---DGWEPESVKIISPN----SSPVTYDFNTSA-----PNEDWYGVN  154 (194)
Q Consensus       119 ~---dGW~pe~V~V~~~~----~~~vtF~f~~~L-----P~~vwyG~N  154 (194)
                      +   ++|++++|+|....    .....|-.++||     |.-+...+|
T Consensus        81 ~G~~p~W~l~~V~V~d~~~~~~~~~~~F~c~rWLa~d~~~~~~~~~~~  128 (129)
T cd01754          81 TGNHPGWYVNYVEVTQAGQHAPCMQHLFAVEQWLATDESPYMLTAVRN  128 (129)
T ss_pred             CCCCCCcccCEEEEEeCCCCCcCcEEEEEecEeccCCCCcceeEEEec
Confidence            6   69999999998743    235779999999     445555444

Many of its members are stress induced. In general, PLAT/LH2 consists of an eight stranded beta-barrel and it's proposed function is to mediate interaction with lipids or membrane bound proteins.

>cd01753 PLAT_LOX PLAT domain of 12/15-lipoxygenase

Probab=99.66  E-value=1.2e-15  Score=117.56  Aligned_cols=102  Identities=18%  Similarity=0.228  Sum_probs=90.0

Q ss_pred             eEEEEEEecCCCCccCCceeEEEEecCCCCeEEecCCCCCCCCCccCccccceeeecC-CcccccEEEEEEeCC---CCc
Q 029380           47 TYLVVIKTSCDSKNFTRDRISIAFGDAYGNQIYAPRLDDPFTKTFQSCSSDGFQIDGP-CATDICYVYLHRSGL---DGW  122 (194)
Q Consensus        47 ~YtV~IkTsC~s~a~T~d~ISl~FgDa~Gn~V~v~~Ld~p~~~~FErCs~DtF~v~Gp-Cl~~IC~lyL~r~G~---dGW  122 (194)
                      .|+|+|+||-...|||+++|.|.+.+..|+.-.+ .|+++..+ |||+++|+|.|..+ .+++|++|.|.+|++   ++|
T Consensus         2 ~Y~V~V~Tg~~~~AGT~a~V~i~l~G~~g~S~~~-~L~~~~~~-FerG~~d~F~v~~~~~lG~l~~i~i~~d~~g~~~~W   79 (113)
T cd01753           2 EYKVTVATGSSLFAGTDDYIYLTLVGTAGESEKQ-LLDRPGYD-FERGAVDEYKVKVPEDLGELLLVRLRKRKYLLFDAW   79 (113)
T ss_pred             EEEEEEEECCCcCCccccEEEEEEEECCCcccCE-EcCCCCCc-cCCCCeeEEEEecccCCCCcEEEEEEECCCCCCCCe
Confidence            5999999999999999999999999999998776 47777654 99999999999987 569999999999965   799


Q ss_pred             eecEEEEecCCCCceeEEecccCCCCCc
Q 029380          123 EPESVKIISPNSSPVTYDFNTSAPNEDW  150 (194)
Q Consensus       123 ~pe~V~V~~~~~~~vtF~f~~~LP~~vw  150 (194)
                      ++++|+|.+.......|..++||..+.-
T Consensus        80 ~l~~V~V~~~~~~~~~F~c~rWl~~~~~  107 (113)
T cd01753          80 FCNYITVTGPGGDEYHFPCYRWIEGYGT  107 (113)
T ss_pred             eecEEEEEcCCCCEEEEEhHHeECCCCE
Confidence            9999999988766678889999975543

As a unique subfamily of the mammalian lipoxygenases, they catalyze enzymatic lipid peroxidation in complex biological structures via direct dioxygenation of phospholipids and cholesterol esters of biomembranes and plasma lipoproteins. Both types of enzymes are cytosolic but need this domain to access their sequestered membrane or micelle bound substrates.

>cd01756 PLAT_repeat PLAT/LH2 domain repeats of family of proteins with unknown function

Probab=99.61  E-value=6.5e-15  Score=113.19  Aligned_cols=99  Identities=19%  Similarity=0.246  Sum_probs=89.8

Q ss_pred             eEEEEEEecCCCCccCCceeEEEEecCCCCeEEecCCCCC-CCCCccCccccceeeecCCcccccEEEEEEeCC---CCc
Q 029380           47 TYLVVIKTSCDSKNFTRDRISIAFGDAYGNQIYAPRLDDP-FTKTFQSCSSDGFQIDGPCATDICYVYLHRSGL---DGW  122 (194)
Q Consensus        47 ~YtV~IkTsC~s~a~T~d~ISl~FgDa~Gn~V~v~~Ld~p-~~~~FErCs~DtF~v~GpCl~~IC~lyL~r~G~---dGW  122 (194)
                      .|+|+|+||-...|||+++|.|.+....|+.-.+ .|+++ ..+.|||+++|+|.+..+-++.+.+|.|.+|++   ++|
T Consensus         2 ~Y~v~v~TG~~~~AGT~a~V~i~L~G~~g~s~~~-~L~~~~~~~~FerGs~d~F~i~~~~lG~l~~i~i~~d~~g~~~~W   80 (120)
T cd01756           2 TYEVTVKTGDVKGAGTDANVFITLYGENGDTGKR-KLKKSNNKNKFERGQTDKFTVEAVDLGKLKKIRIGHDNSGLGAGW   80 (120)
T ss_pred             EEEEEEEECCCcCCCCCcEEEEEEEeCCCccccE-EccCCCcCCcccCCCeEEEEEEecCCCCeEEEEEEECCCCCCCCc
Confidence            5999999999999999999999999999987765 58876 667999999999999999899999999999976   699


Q ss_pred             eecEEEEecCC-CCceeEEecccCC
Q 029380          123 EPESVKIISPN-SSPVTYDFNTSAP  146 (194)
Q Consensus       123 ~pe~V~V~~~~-~~~vtF~f~~~LP  146 (194)
                      ++++|+|.... .....|.+++||-
T Consensus        81 ~~~~V~V~~~~~~~~~~F~~~~Wl~  105 (120)
T cd01756          81 FLDKVEIREPGTGDEYTFPCNRWLD  105 (120)
T ss_pred             EEeEEEEEECCCceEEEEEeCCccC
Confidence            99999999765 5668899999995

In general, PLAT/LH2 consists of an eight stranded beta-barrel and it's proposed function is to mediate interaction with lipids or membrane bound proteins.

>cd01752 PLAT_polycystin PLAT/LH2 domain of polycystin-1 like proteins

Probab=99.57  E-value=2.3e-14  Score=110.30  Aligned_cols=99  Identities=20%  Similarity=0.228  Sum_probs=89.1

Q ss_pred             eEEEEEEecCCCCccCCceeEEEEecCCCCeEEecCCCCCCCCCccCccccceeeecCC-cccccEEEEEEeCC---CCc
Q 029380           47 TYLVVIKTSCDSKNFTRDRISIAFGDAYGNQIYAPRLDDPFTKTFQSCSSDGFQIDGPC-ATDICYVYLHRSGL---DGW  122 (194)
Q Consensus        47 ~YtV~IkTsC~s~a~T~d~ISl~FgDa~Gn~V~v~~Ld~p~~~~FErCs~DtF~v~GpC-l~~IC~lyL~r~G~---dGW  122 (194)
                      .|+|+|+||-...|||+++|.|.+....|+.-.+ .|+++....|||+++|+|.+..+. ++++++|.|.+|++   ++|
T Consensus         2 ~Y~v~v~Tg~~~gAGT~a~V~i~L~G~~g~s~~~-~L~~~~~~~F~rG~~~~f~i~~~~dlG~l~~i~l~hd~~g~~~~W   80 (120)
T cd01752           2 LYLVTVFTGWRRGAGTTAKVTITLYGAEGESEPH-HLRDPEKPIFERGSVDSFLLTTPFPLGELQSIRLWHDNSGLSPSW   80 (120)
T ss_pred             EEEEEEEECCCCCCCcccEEEEEEEeCCCCcccE-EcCCCCccceeCCCeeEEEecCccCCCCccEEEEEECCCCCCCCe
Confidence            5999999999999999999999999999998775 688887789999999999999875 59999999999975   799


Q ss_pred             eecEEEEecCC-CCceeEEecccCC
Q 029380          123 EPESVKIISPN-SSPVTYDFNTSAP  146 (194)
Q Consensus       123 ~pe~V~V~~~~-~~~vtF~f~~~LP  146 (194)
                      ++++|+|.... .....|..++||-
T Consensus        81 ~l~~V~V~~~~t~~~~~F~~~rWl~  105 (120)
T cd01752          81 YLSRVIVRDLQTGKKWFFLCNDWLS  105 (120)
T ss_pred             EEEEEEEEECCCCcEEEEEeCcEEC
Confidence            99999999764 5567899999994

Polycystins are a large family of membrane proteins composed of multiple domains, present in fish, invertebrates, mammals, and humans that are widely expressed in various cell types and whose biological functions remain poorly defined. In human, mutations in polycystin-1 (PKD1) and polycystin-2 (PKD2) have been shown to be the cause for autosomal dominant polycystic kidney disease (ADPKD). The generally proposed function of PLAT/LH2 domains is to mediate interaction with lipids or membrane bound proteins.

>cd02899 PLAT_SR Scavenger receptor protein

Probab=99.49  E-value=2.1e-13  Score=106.09  Aligned_cols=97  Identities=23%  Similarity=0.291  Sum_probs=85.4

Q ss_pred             eEEEEEEecCCCCccCCceeEEEEecCCCCeEEecCCCCCCCCCccCccccceeeecCCcccccEEEEEEeCC-CCceec
Q 029380           47 TYLVVIKTSCDSKNFTRDRISIAFGDAYGNQIYAPRLDDPFTKTFQSCSSDGFQIDGPCATDICYVYLHRSGL-DGWEPE  125 (194)
Q Consensus        47 ~YtV~IkTsC~s~a~T~d~ISl~FgDa~Gn~V~v~~Ld~p~~~~FErCs~DtF~v~GpCl~~IC~lyL~r~G~-dGW~pe  125 (194)
                      .|+|+|+||-...|||+++|.|.+.+..|..=.. .|++    .|||++.|+|.|++..++++=.+.|.++|. ++||++
T Consensus         2 ~Y~I~V~TG~~~~AGT~~~V~i~L~G~~g~S~~~-~L~~----~F~~G~~d~F~v~~~dLG~l~~i~l~n~g~~~~Wf~~   76 (109)
T cd02899           2 TYTASVQTGKDKEAGTNGTIEITLLGSSGRSNPK-TLSQ----GFYPGSLKRIRFRAADVGDINAIILSNTALNDPWYCD   76 (109)
T ss_pred             eEEEEEEECCCCCCCccceEEEEEEECCCCcCCE-EccC----ccCCCceEEEEECccccCceEEEEEECCCCCCCceee
Confidence            5999999999999999999999999999966553 3443    499999999999999999999999988887 799999


Q ss_pred             EEEEecCCCCceeEEecccC--CCC
Q 029380          126 SVKIISPNSSPVTYDFNTSA--PNE  148 (194)
Q Consensus       126 ~V~V~~~~~~~vtF~f~~~L--P~~  148 (194)
                      +|+|..+..+...|-.++||  |++
T Consensus        77 ~V~V~~~~g~~~~Fpc~rWla~~~~  101 (109)
T cd02899          77 YVRIKSEDGKVFAFNVKRWIGYPYE  101 (109)
T ss_pred             EEEEECCCCCEEEEEcceeeCCchh
Confidence            99999876677789999999  654

A subfamily of PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology 2) domain. It consists of an eight stranded beta-barrel. The domain can be found in various domain architectures, in case of lipoxygenases, alpha toxin, lipases and polycystin, but also as a single domain or as repeats.The putative function of this domain is to facilitate access to sequestered membrane or micelle bound substrates. This subfamily contains Toxoplasma gondii Scavenger protein TgSR1.

>smart00308 LH2 Lipoxygenase homology 2 (beta barrel) domain

Probab=99.44  E-value=1.5e-12  Score=96.23  Aligned_cols=98  Identities=18%  Similarity=0.185  Sum_probs=81.8

Q ss_pred             eEEEEEEecCCCCccCCceeEEEEecCCCCeEEecCCCCCCCCCccCccccceeeecCC-cccccEEEEEEeC-CCCcee
Q 029380           47 TYLVVIKTSCDSKNFTRDRISIAFGDAYGNQIYAPRLDDPFTKTFQSCSSDGFQIDGPC-ATDICYVYLHRSG-LDGWEP  124 (194)
Q Consensus        47 ~YtV~IkTsC~s~a~T~d~ISl~FgDa~Gn~V~v~~Ld~p~~~~FErCs~DtF~v~GpC-l~~IC~lyL~r~G-~dGW~p  124 (194)
                      .|+|+|+||=...|||+++|.|.+....|+.-.. .+.......|||+++|+|.+..+. ++++.++.+.+++ .++|++
T Consensus         2 ~Y~v~V~Tg~~~~aGT~~~V~l~L~g~~~~s~~~-~~~~~~~~~f~~g~~~~f~v~~~~~lG~l~~v~v~~d~~~~~w~l   80 (105)
T smart00308        2 KYKVTVTTGGLDFAGTTASVSLSLVGAEGDGKES-KLDYLFKGIFARGSTYEFTFDVDEDFGELGAVKIKNEHRHPEWFL   80 (105)
T ss_pred             EEEEEEEECCccCCCccceEEEEEEeCCCCCcce-eccccCCccccCCceEEEEEecccCCCCcEEEEEEeCCCCCCeEE
Confidence            5999999999999999999999999999642211 112112235999999999999986 7999999999999 799999


Q ss_pred             cEEEEecC-CCCceeEEecccC
Q 029380          125 ESVKIISP-NSSPVTYDFNTSA  145 (194)
Q Consensus       125 e~V~V~~~-~~~~vtF~f~~~L  145 (194)
                      ++|+|.+. ......|-.++||
T Consensus        81 ~~V~V~~~~~~~~~~F~c~~Wl  102 (105)
T smart00308       81 KSITVKDLPTGGKYHFPCNSWV  102 (105)
T ss_pred             EEEEEEECCCCCEEEEEcCcee
Confidence            99999874 5678999999998

>PF01477 PLAT: PLAT/LH2 domain; InterPro: IPR001024 Lipoxygenases (1

Probab=99.33  E-value=2.8e-12  Score=94.23  Aligned_cols=99  Identities=22%  Similarity=0.254  Sum_probs=84.0

Q ss_pred             EEEEEEecCCCCccCCceeEEEEecCCCCeEEecCCCCCCCCCccCccccceeeecC-CcccccEEEEEEeCC---CCce
Q 029380           48 YLVVIKTSCDSKNFTRDRISIAFGDAYGNQIYAPRLDDPFTKTFQSCSSDGFQIDGP-CATDICYVYLHRSGL---DGWE  123 (194)
Q Consensus        48 YtV~IkTsC~s~a~T~d~ISl~FgDa~Gn~V~v~~Ld~p~~~~FErCs~DtF~v~Gp-Cl~~IC~lyL~r~G~---dGW~  123 (194)
                      |+|.|+||-...|||+++|.|.+....|+.-...-++.+. ..+  .++|+|.+..+ -++.|.++.|.++|.   ++|+
T Consensus         1 Y~v~v~Tg~~~~aGT~~~V~i~l~G~~g~s~~~~l~~~~~-~~~--g~~d~F~i~~~~~lG~i~~i~i~~~~~~~~~~W~   77 (113)
T PF01477_consen    1 YRVTVKTGDERGAGTDANVYITLYGSKGKSGEIELLDPSG-FNF--GSTDTFTIETPEDLGEIQKIRIWHDGSGPSPSWY   77 (113)
T ss_dssp             EEEEEEEESSTEEEESSEEEEEEEETTEEEEEEEEEEEEE-TST--TEEEEEEEEESSCGCSEEEEEEEEESSSSSSEEE
T ss_pred             CEEEEEECCCCCCCcCCeEEEEEEECCCCcceEEEeeeee-ccc--CceEEeeeeecccCCCCcEEEEEEccCCCccceE
Confidence            9999999999999999999999999999987765444332 223  99999999995 679999999999955   7999


Q ss_pred             ecEEEEecC-CCCceeEEecccCCCCC
Q 029380          124 PESVKIISP-NSSPVTYDFNTSAPNED  149 (194)
Q Consensus       124 pe~V~V~~~-~~~~vtF~f~~~LP~~v  149 (194)
                      +++|+|... .....+|.++.||-.+.
T Consensus        78 l~~V~V~~~~~~~~~~F~~~~Wl~~~~  104 (113)
T PF01477_consen   78 LDSVVVTDGETGRTYTFPCNRWLDPDK  104 (113)
T ss_dssp             EEEEEEEETTTSEEEEEEEEEEESTTE
T ss_pred             EEEEEEEeCCCCcEEEEEcCCEECCCC
Confidence            999999884 56789999999996443

13.11.- from EC) are a class of iron-containing dioxygenases which catalyses the hydroperoxidation of lipids, containing a cis,cis-1,4-pentadiene structure. They are common in plants where they may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. In mammals a number of lipoxygenases isozymes are involved in the metabolism of prostaglandins and leukotrienes []. Sequence data is available for the following lipoxygenases: Plant lipoxygenases (1.13.11.12 from EC, IPR001246 from INTERPRO). Plants express a variety of cytosolic isozymes as well as what seems to be a chloroplast isozyme []. Mammalian arachidonate 5-lipoxygenase (1.13.11.34 from EC, IPR001885 from INTERPRO). Mammalian arachidonate 12-lipoxygenase (1.13.11.31 from EC, IPR001885 from INTERPRO). Mammalian erythroid cell-specific 15-lipoxygenase (1.13.11.33 from EC, IPR001885 from INTERPRO). The iron atom in lipoxygenases is bound by four ligands, three of which are histidine residues []. Six histidines are conserved in all lipoxygenase sequences, five of them are found clustered in a stretch of 40 amino acids. This region contains two of the three iron-ligands; the other histidines have been shown [] to be important for the activity of lipoxygenases. This entry represents a domain found in lipoxygenases and other enzymes. It is known as the PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology) domain, is found in a variety of membrane or lipid associated proteins. Structurally, this domain forms a beta-sandwich composed of two sheets of four strands each [, , ]. The most highly conserved regions coincide with the beta-strands, with most of the highly conserved residues being buried within the protein. An exception to this is a surface lysine or arginine that occurs on the surface of the fifth beta-strand of the eukaryotic domains. In pancreatic lipase, the lysine in this position forms a salt bridge with the procolipase protein. The conservation of a charged surface residue may indicate the location of a conserved ligand-binding site. It is thought that this domain may mediate membrane attachment via other protein binding partners.; GO: 0005515 protein binding; PDB: 3FG3_D 3FG1_C 3FG4_D 3DY5_A 2FNQ_B 3O8Y_B 3V99_B 3V92_A 3V98_B 1HPL_A ....

>cd01757 PLAT_RAB6IP1 PLAT/LH2 domain present in RAB6 interacting protein 1 (Rab6IP1)_like family

Probab=98.81  E-value=4.2e-08  Score=77.12  Aligned_cols=90  Identities=13%  Similarity=0.141  Sum_probs=74.2

Q ss_pred             eEEEEEEecCC-CCccCCceeEEEEecCCCCeEEecCCCCCCCCCccCccccceeeecCCcccccEEEEEEeCC---CCc
Q 029380           47 TYLVVIKTSCD-SKNFTRDRISIAFGDAYGNQIYAPRLDDPFTKTFQSCSSDGFQIDGPCATDICYVYLHRSGL---DGW  122 (194)
Q Consensus        47 ~YtV~IkTsC~-s~a~T~d~ISl~FgDa~Gn~V~v~~Ld~p~~~~FErCs~DtF~v~GpCl~~IC~lyL~r~G~---dGW  122 (194)
                      .|.|+|.||-. ..|||+++|+|.+....|+.= ...|+++   .|      .|.+....++++-++.+.||.+   ++|
T Consensus         2 ~Y~VtV~TG~~~~gAGT~anV~i~L~G~~g~s~-~~~L~~~---~f------~~~v~~~~LG~L~~irIwHDnsG~~~~W   71 (114)
T cd01757           2 PYHVVIVPSKKLGGSMFTANPWICVSGELGETP-PLQIPKN---SL------EMTFDCQNLGKLTTVQIGHDNSGLLAKW   71 (114)
T ss_pred             eEEEEEEeCCCCCCCCCcceEEEEEEEcCCCcC-CEEecCC---ce------EEEEecCCcCCcEEEEEEECCCCCCCCe
Confidence            59999999999 699999999999999998643 3345532   34      5888778889999999999955   799


Q ss_pred             eecEEEEecC-CCCceeEEecccCC
Q 029380          123 EPESVKIISP-NSSPVTYDFNTSAP  146 (194)
Q Consensus       123 ~pe~V~V~~~-~~~~vtF~f~~~LP  146 (194)
                      ++++|+|... ......|-.++||-
T Consensus        72 fl~~V~V~d~~t~~~~~FpC~rWLa   96 (114)
T cd01757          72 LVEYVMVRNEITGHTYKFPCGRWLG   96 (114)
T ss_pred             eeeEEEEEeCCCCCEEEEecCceec
Confidence            9999999984 55567788999993

PLAT/LH2 domains consists of an eight stranded beta-barrel. In RabIP1 this domain may participate in lipid-mediated modulation of Rab6IP1's function via it's generally proposed function of mediating interaction with lipids or membrane bound proteins.

>cd01755 PLAT_lipase PLAT/ LH2 domain present in connection with a lipase domain

Probab=97.77  E-value=0.00049  Score=53.60  Aligned_cols=90  Identities=10%  Similarity=0.079  Sum_probs=71.8

Q ss_pred             ceEEEEEEecCCCCccCCceeEEEEecCCCCeEEecCCCCCCCCCccCccccceee-ecCCcccccEEEEEEeCC-----
Q 029380           46 CTYLVVIKTSCDSKNFTRDRISIAFGDAYGNQIYAPRLDDPFTKTFQSCSSDGFQI-DGPCATDICYVYLHRSGL-----  119 (194)
Q Consensus        46 C~YtV~IkTsC~s~a~T~d~ISl~FgDa~Gn~V~v~~Ld~p~~~~FErCs~DtF~v-~GpCl~~IC~lyL~r~G~-----  119 (194)
                      +.|.|+|.||-...++|++.|.|.+.-..|+.=.+ .|.++   .||++++|+|-+ .-..++++-.|.+.++.+     
T Consensus         1 ~hY~vtV~~~~~~~agt~~~v~v~L~G~~g~s~~~-~l~~~---~~~~g~~~sfli~t~~~lG~l~~v~~~~dn~~~~~~   76 (120)
T cd01755           1 WHYQVKVHLSGKKNLEVDGTFTVSLYGTKGETEQL-PIVLG---ELKPNKTYSFLIDTEVDIGDLLKVKFKWENNVINSN   76 (120)
T ss_pred             CEEEEEEEEeCccccCcCccEEEEEEcCCCCcccE-EEeCC---cccCCCEEEEEEEcCCCccceEEEEEEEcCCCcccc
Confidence            36999999999999999999999999888876444 23333   489999999999 667889999999999844     


Q ss_pred             -----CCceecEEEEe-cCCCCceeE
Q 029380          120 -----DGWEPESVKII-SPNSSPVTY  139 (194)
Q Consensus       120 -----dGW~pe~V~V~-~~~~~~vtF  139 (194)
                           +.|+.+.|.|. +...+..+|
T Consensus        77 ~~~~~p~~~~~~I~Vq~get~~~~~F  102 (120)
T cd01755          77 SGETLPKLGARKIRVKSGETQKKFTF  102 (120)
T ss_pred             cccCCCcEEEEEEEEEECCCCCEEEE
Confidence                 48889999996 444443444

This family contains two major subgroups, the lipoprotein lipase (LPL) and the pancreatic triglyceride lipase. LPL is a key enzyme in catabolism of plasma lipoprotein triglycerides (TGs). The central role of triglyceride lipases is in energy production. In general, PLAT/LH2 domain's proposed function is to mediate interaction with lipids or membrane bound proteins.

>cd01758 PLAT_LPL PLAT/ LH2 domain present in lipoprotein lipase (LPL)

Probab=96.61  E-value=0.026  Score=45.67  Aligned_cols=78  Identities=17%  Similarity=0.218  Sum_probs=62.5

Q ss_pred             ceEEEEEEecCCCCcc-CCceeEEEEecCCCCeEEecCCCCCCCCCccCccccceee-ecCCcccccEEEEEEeCCCCce
Q 029380           46 CTYLVVIKTSCDSKNF-TRDRISIAFGDAYGNQIYAPRLDDPFTKTFQSCSSDGFQI-DGPCATDICYVYLHRSGLDGWE  123 (194)
Q Consensus        46 C~YtV~IkTsC~s~a~-T~d~ISl~FgDa~Gn~V~v~~Ld~p~~~~FErCs~DtF~v-~GpCl~~IC~lyL~r~G~dGW~  123 (194)
                      +.|.|.|.||-...++ |+..|.|++.-..|+.=.+ .|.+|  +.+|++++|+|-| .-..++++-.|.+...+..||.
T Consensus         1 yhYqVtV~~~~~~~~~~t~~~v~i~L~G~~g~S~~~-~l~~~--~~~~~G~t~sfLi~t~~dlG~L~~vk~~W~~n~~~~   77 (137)
T cd01758           1 FHYQLKIHFFNQTNRIETDPTFTISLYGTLGESENL-PLTLP--EGITGNKTNSFLITTEKDIGDLLMLKLKWEGSSLWS   77 (137)
T ss_pred             CeEEEEEEEecccCCCcccceEEEEEEcCCCcccCE-EEecC--cccCCCCeEEEEEECCCCcCCEEEEEEEEeCCCCCC
Confidence            4699999999988888 9999999999888776544 23334  4579999999999 6788899999999666665666


Q ss_pred             ecE
Q 029380          124 PES  126 (194)
Q Consensus       124 pe~  126 (194)
                      |-|
T Consensus        78 ~sW   80 (137)
T cd01758          78 NSW   80 (137)
T ss_pred             hhh
Confidence            554

LPL is a key enzyme in catabolism of plasma lipoprotein triglycerides (TGs) and has therefeore has a profound influence on triglyceride and high-density lipoprotein (HDL) cholesterol levels in the blood. In general, PLAT/LH2 domain's proposed function is to mediate interaction with lipids or membrane bound proteins.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	194
3vf1_A	698	11R-lipoxygenase; LOX, PLAT, beta sandwich, C2-lik	5e-07

>3vf1_A 11R-lipoxygenase; LOX, PLAT, beta sandwich, C2-like domain, non-heme iron, conformational change, dioxygenase, oxidoreductase; HET: SUC; 2.47A {Gersemia fruticosa} Length = 698

 Score = 48.4 bits (114), Expect = 5e-07
 Identities = 25/122 (20%), Positives = 39/122 (31%), Gaps = 10/122 (8%)

Query: 45  NCTYLVVIKTSCDSKNFTRDRISIAFGDAYGNQIYAPRLDDPFTKTFQSCSSDGFQIDGP 104
           +  Y + ++T       T   +SI      G +  A  LD  F   F+S  +D +   G 
Sbjct: 19  HMKYKITVETGDLRGAGTDASVSIKLTGKDGAETSAFSLDKYFHNDFESGGTDTYDQSGV 78

Query: 105 CATDICYVYLHRSGL---DGWEPESVKIISPNSSPVT---YDFNTSAPNEDWYGVNLCQI 158
              +I  + L  +G      W    V I   + +      Y F    P   W    L   
Sbjct: 79  DVGEIAMITLKENGFGLKSDWYIAKVIIEKIDEATGFSNKYIF----PCYRWVIKQLVVY 134

Query: 159 HP 160
             
Sbjct: 135 EG 136

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	194
3vf1_A	698	11R-lipoxygenase; LOX, PLAT, beta sandwich, C2-lik	99.72
1lox_A	662	15-lipoxygenase, 15LOX; oxidoreductase, 15LO_depot	99.53
3v98_A	691	Arachidonate 5-lipoxygenase; dioxygenase, oxidored	99.52
3dy5_A	1066	Allene oxide synthase-lipoxygenase protein; fusion	99.5
3fg1_A	696	Allene oxide synthase-lipoxygenase protein; arichi	99.4
3cwz_B	384	RAB6IP1, RAB6-interacting protein 1; RAB small GTP	99.29
2wxu_A	370	Phospholipase C; cytolysis, hydrolase, hemolysis,	99.02
1olp_A	370	Alpha-toxin; zinc phospholipase C, GAS gangrene de	98.95
1bu8_A	452	Protein (pancreatic lipase related protein 2); hyd	94.5
1rp1_A	450	Pancreatic lipase related protein 1; hydrolase, li	93.48
1gpl_A	432	RP2 lipase; serine esterase, hydrolase, lipid degr	92.54
1hpl_A	449	Lipase; hydrolase(carboxylic esterase); 2.30A {Equ	92.13
1w52_X	452	Pancreatic lipase related protein 2; detergent, cl	91.84

>3vf1_A 11R-lipoxygenase; LOX, PLAT, beta sandwich, C2-like domain, non-heme iron, conformational change, dioxygenase, oxidoreductase; HET: SUC; 2.47A {Gersemia fruticosa}

Probab=99.72  E-value=9.1e-18  Score=161.36  Aligned_cols=106  Identities=20%  Similarity=0.255  Sum_probs=96.1

Q ss_pred             cCCceEEEEEEecCCCCccCCceeEEEEecCCCCeEEecCCCCCCCCCccCccccceeeecCCcccccEEEEEEeCC---
Q 029380           43 FGNCTYLVVIKTSCDSKNFTRDRISIAFGDAYGNQIYAPRLDDPFTKTFQSCSSDGFQIDGPCATDICYVYLHRSGL---  119 (194)
Q Consensus        43 ~~~C~YtV~IkTsC~s~a~T~d~ISl~FgDa~Gn~V~v~~Ld~p~~~~FErCs~DtF~v~GpCl~~IC~lyL~r~G~---  119 (194)
                      .++|.|+|+|+||+...|||+++|.|.+.+..|.+.....|++|+.+.||||++|+|.+++.|++++|+|.|.+||+   
T Consensus        17 ~~~~~Y~V~V~TG~~~~AGTda~V~I~L~G~~G~~S~~~~L~~~~~~~FeRGs~D~F~v~~~~LG~L~~IrI~hDnsG~~   96 (698)
T 3vf1_A           17 HHHMKYKITVETGDLRGAGTDASVSIKLTGKDGAETSAFSLDKYFHNDFESGGTDTYDQSGVDVGEIAMITLKENGFGLK   96 (698)
T ss_dssp             --CEEEEEEEEECSCCCSCSBCCEEEEEEETTSCBCCCEEECCBCSSSSCCCCEEEEEEEECCCSSEEEEEEEECCCSSB
T ss_pred             CCcceEEEEEEECCCCCCCCCceeEEEEEECCCCeecceEeCCCCCCccccCCeeEEEEEecccCCceEEEEEECCCCCC
Confidence            56999999999999999999999999999999995556689999999999999999999999999999999999976   


Q ss_pred             CCceecEEEEecCC-----CCceeEEecccCCCC
Q 029380          120 DGWEPESVKIISPN-----SSPVTYDFNTSAPNE  148 (194)
Q Consensus       120 dGW~pe~V~V~~~~-----~~~vtF~f~~~LP~~  148 (194)
                      +||++++|+|....     .....|..++||-.+
T Consensus        97 ~~Wfl~~V~V~~~~t~~~~g~~~~Fpc~rWL~~d  130 (698)
T 3vf1_A           97 SDWYIAKVIIEKIDEATGFSNKYIFPCYRWVIKQ  130 (698)
T ss_dssp             CCCEEEEEEEEEECTTTCCEEEEEEEEEEECSSE
T ss_pred             CCeEEeEEEEEcCCCCCCCCcEEEEEhhhcccCC
Confidence            79999999998775     467889999999654

>1lox_A 15-lipoxygenase, 15LOX; oxidoreductase, 15LO_depot2; HET: RS7; 2.40A {Oryctolagus cuniculus} SCOP: a.119.1.2 b.12.1.1 PDB: 2p0m_A*

Probab=99.53  E-value=2.6e-14  Score=136.66  Aligned_cols=95  Identities=9%  Similarity=0.133  Sum_probs=87.0

Q ss_pred             eEEEEEEecCCCCccCCceeEEEEecCCCCeEEecCCCCCCCCCccCccccceeeecCCc-ccccEEEEEEeCC---CCc
Q 029380           47 TYLVVIKTSCDSKNFTRDRISIAFGDAYGNQIYAPRLDDPFTKTFQSCSSDGFQIDGPCA-TDICYVYLHRSGL---DGW  122 (194)
Q Consensus        47 ~YtV~IkTsC~s~a~T~d~ISl~FgDa~Gn~V~v~~Ld~p~~~~FErCs~DtF~v~GpCl-~~IC~lyL~r~G~---dGW  122 (194)
                      .|+|+|+||....|||+++|+|.+.+..|+..... |+     .|||+++|+|.|..+|. +++|++.+.++++   ++|
T Consensus         2 ~Y~V~V~TG~~~~AGTda~V~i~L~G~~G~s~~~~-L~-----~FerG~~d~F~v~~~~dlG~l~~I~I~~d~~g~~~~W   75 (662)
T 1lox_A            2 VYRVCVSTGASIYAGSKNKVELWLVGQHGEVELGS-CL-----RPTRNKEEEFKVNVSKYLGSLLFVRLRKKHFLKEDAW   75 (662)
T ss_dssp             EEEEEEEECCSTTCCCSSEEEEEEEESSCEEEEEE-EE-----CCCTTCEEEEEEECSSCCCSEEEEEEEEECSSSCCCE
T ss_pred             eEEEEEEECCCcCCCcCCcEEEEEEECCCCccCee-CC-----CcCCCCccEEEEEecCCCCcceEEEEEeCCCCCCCCc
Confidence            59999999999999999999999999999998876 86     89999999999999776 8999999999987   899


Q ss_pred             eecEEEEecCC--CCceeEEecccCCC
Q 029380          123 EPESVKIISPN--SSPVTYDFNTSAPN  147 (194)
Q Consensus       123 ~pe~V~V~~~~--~~~vtF~f~~~LP~  147 (194)
                      ++++|+|.+++  .....|..|+||-.
T Consensus        76 fl~~V~V~~p~~~g~~~~F~Cn~WL~~  102 (662)
T 1lox_A           76 FCNWISVQALGAAEDKYWFPCYRWVVG  102 (662)
T ss_dssp             EEEEEEEEESSSCCCCEEEEEEEEECS
T ss_pred             EEeEEEEecCCCCCcEEEEEeceEecC
Confidence            99999999876  44589999999943

>3v98_A Arachidonate 5-lipoxygenase; dioxygenase, oxidoreductase; 2.07A {Homo sapiens} PDB: 3v99_A* 3o8y_A 3v92_B

Probab=99.52  E-value=3.3e-14  Score=136.70  Aligned_cols=102  Identities=16%  Similarity=0.233  Sum_probs=89.1

Q ss_pred             cCCceEEEEEEecCCCCccCCceeEEEEecCCCCeEEecCCCCCCCCCccCccccceeeecCC-cccccEEEEEEeCC--
Q 029380           43 FGNCTYLVVIKTSCDSKNFTRDRISIAFGDAYGNQIYAPRLDDPFTKTFQSCSSDGFQIDGPC-ATDICYVYLHRSGL--  119 (194)
Q Consensus        43 ~~~C~YtV~IkTsC~s~a~T~d~ISl~FgDa~Gn~V~v~~Ld~p~~~~FErCs~DtF~v~GpC-l~~IC~lyL~r~G~--  119 (194)
                      .+.|.|+|+|+||....|||+++|.|.+....|..-.+ .|++   +.|||+++|+|.++.++ ++++|+|.|.+|++  
T Consensus        19 ~~~~~Y~V~V~TG~~~~AGTda~V~I~L~G~~G~S~~~-~L~~---~~FeRG~~D~F~v~~~~~LG~L~~IrI~hDnsG~   94 (691)
T 3v98_A           19 SHMPSYTVTVATGSQEHAGTDDYIYLSLVGSAGCSEKH-LLDK---GSFERGAVDSYDVTVDEELGEIQLVRIEKRKYGS   94 (691)
T ss_dssp             ----CEEEEEEECCSTTCCBCSEEEEEEEESSCBCCCE-ECCS---SCBCTTCEEEEEECCSSCCCSEEEEEEEEECSSS
T ss_pred             CCceeEEEEEEECCCCCCCCCceeEEEEEECCCceeeE-EecC---CcccCCCeeEEEEEeccCCCCceEEEEEECCCCC
Confidence            57999999999999999999999999999999997664 5775   88999999999999955 59999999999966  


Q ss_pred             -CCceecEEEEecCCCCceeEEecccCCCC
Q 029380          120 -DGWEPESVKIISPNSSPVTYDFNTSAPNE  148 (194)
Q Consensus       120 -dGW~pe~V~V~~~~~~~vtF~f~~~LP~~  148 (194)
                       +||++++|+|.........|..++||-.+
T Consensus        95 ~~~Wfl~~V~V~~~~g~~~~Fpc~rWL~~d  124 (691)
T 3v98_A           95 NDDWYLKYITLKTPHGDYIEFPCYRWITGD  124 (691)
T ss_dssp             CCCEEEEEEEEECTTSCEEEEEEEEEECSS
T ss_pred             CCCeEEeEEEEECCCCcEEEEehHHhcCCC
Confidence             79999999999888778899999999644

>3dy5_A Allene oxide synthase-lipoxygenase protein; fusion protein, BI-functional enzyme, dioxygenase, fatty ACI biosynthesis, heme, iron; HET: HEM; 3.51A {Plexaura homomalla}

Probab=99.50  E-value=3.3e-14  Score=141.93  Aligned_cols=105  Identities=25%  Similarity=0.301  Sum_probs=88.3

Q ss_pred             cCCceEEEEEEecCCCCccCCceeEEEEecCCCCeEEecCCCCCCCCCccCccccceeeecCCcccccEEEEEEeCC---
Q 029380           43 FGNCTYLVVIKTSCDSKNFTRDRISIAFGDAYGNQIYAPRLDDPFTKTFQSCSSDGFQIDGPCATDICYVYLHRSGL---  119 (194)
Q Consensus        43 ~~~C~YtV~IkTsC~s~a~T~d~ISl~FgDa~Gn~V~v~~Ld~p~~~~FErCs~DtF~v~GpCl~~IC~lyL~r~G~---  119 (194)
                      .+.|.|+|+|+||....|||+++|.|.+....|..-.+ .|++|+.+.|||+++|+|.++...++++|+|.|.+|++   
T Consensus       371 ~~~~~Y~V~V~TG~~~~AGTda~V~i~L~G~~G~S~~~-~L~~~~~~~FeRGs~d~F~v~~~~LG~L~~IrI~hDnsG~~  449 (1066)
T 3dy5_A          371 GQNAIYNVEVETGDREHAGTDATITIRITGAKGRTDYL-KLDKWFHNDFEAGSKEQYTVQGFDVGDIQLIELHSDGGGYW  449 (1066)
T ss_dssp             --CCEEEEEEEECCSTTCCCCSCCEEEEEESSCBCCCE-EC-------CCTTCEEEEEEECSCCSSEEEEEEECCCCC--
T ss_pred             cCceeEEEEEEECCCCCCCCCceeEEEEEECCCceeeE-EeCCCCcCccccCCcceEEEEEecCCCceEEEEEECCCCCC
Confidence            45899999999999999999999999999999997654 79999989999999999999997789999999999954   


Q ss_pred             ---CCceecEEEEecCC-CCceeEEecccCCCC
Q 029380          120 ---DGWEPESVKIISPN-SSPVTYDFNTSAPNE  148 (194)
Q Consensus       120 ---dGW~pe~V~V~~~~-~~~vtF~f~~~LP~~  148 (194)
                         ++|++++|+|.... .....|..++||-.+
T Consensus       450 ~~~~~Wfl~~V~V~~~~tg~~~~Fpc~rWL~~d  482 (1066)
T 3dy5_A          450 SGDPDWFVNRVIIISSTQDRVYSFPCFRWVIKD  482 (1066)
T ss_dssp             CCCCCEEEEEEEEEESSSSSCEEEEEEEEESSE
T ss_pred             CCCCCeEEeEEEEEeCCCCCEEEEehhhhccCC
Confidence               69999999999886 677899999999765

>3fg1_A Allene oxide synthase-lipoxygenase protein; arichidonic metabolism, dioxygenase, fatty ACI biosynthesis, heme, iron, lipid synthesis, lyase; HET: GOL; 1.85A {Plexaura homomalla} PDB: 3fg4_A* 3fg3_A* 2fnq_A

Probab=99.40  E-value=4.5e-13  Score=128.90  Aligned_cols=99  Identities=24%  Similarity=0.320  Sum_probs=89.2

Q ss_pred             ceEEEEEEecCCCCccCCceeEEEEecCCCCeEEecCCCCCCCCCccCccccceeeecCCcccccEEEEEEeCC------
Q 029380           46 CTYLVVIKTSCDSKNFTRDRISIAFGDAYGNQIYAPRLDDPFTKTFQSCSSDGFQIDGPCATDICYVYLHRSGL------  119 (194)
Q Consensus        46 C~YtV~IkTsC~s~a~T~d~ISl~FgDa~Gn~V~v~~Ld~p~~~~FErCs~DtF~v~GpCl~~IC~lyL~r~G~------  119 (194)
                      -.|.|+|+||....|||+++|.|.+....|..-.. .|++   +.|||+++|+|.+++..++++|+|.|.+|++      
T Consensus         7 ~~~~~~V~TG~~~~AGTda~V~I~L~G~~G~S~~~-~L~~---~~FeRGs~d~F~v~~~dLG~L~~IrI~hDnsg~G~~~   82 (696)
T 3fg1_A            7 AIYNVEVETGDREHAGTDATITIRITGAKGRTDYL-KLDK---GSFEAGSKEQYTVQGFDVGDIQLIELHSDGGGYWSGD   82 (696)
T ss_dssp             EEEEEEEEECSSTTCCBCSCEEEEEEETTEECCCE-EECS---SCBCTTCEEEEEEEEECCSSEEEEEEEECCCCTTCSC
T ss_pred             ceeeEEEEeCCCCCCCCCceeEEEEEECCCceeeE-EeCC---CCcCCCCccEEEEEEccCCCceEEEEEECCcCCCCCC
Confidence            47999999999999999999999999999986544 5776   8899999999999997789999999999965      


Q ss_pred             CCceecEEEEecCC-CCceeEEecccCCCC
Q 029380          120 DGWEPESVKIISPN-SSPVTYDFNTSAPNE  148 (194)
Q Consensus       120 dGW~pe~V~V~~~~-~~~vtF~f~~~LP~~  148 (194)
                      ++|++++|+|.... .....|..++||-.+
T Consensus        83 ~~Wf~~~V~V~~~~tg~~~~Fpc~rWL~~d  112 (696)
T 3fg1_A           83 PDWFVNRVIIISSTQDRVYSFPCFRWVIKD  112 (696)
T ss_dssp             CCEEEEEEEEEETTCSSCEEEEEEEEESSE
T ss_pred             CCeEeeEEEEEeCCCCcEEEeEhhhhccCC
Confidence            69999999999886 677899999999755

>3cwz_B RAB6IP1, RAB6-interacting protein 1; RAB small GTPase, RAB-binding domain, guanosine 5' triphosphate, RUN, RPIP8, UNC-14, nesca PLAT; HET: GTP; 3.20A {Mus musculus}

Probab=99.29  E-value=1.2e-11  Score=112.07  Aligned_cols=94  Identities=10%  Similarity=0.039  Sum_probs=83.5

Q ss_pred             cCCceEEEEEEecCCCC-ccCCceeEEEEecCCCCeEEecCCCCCCCCCccCccccceeeecCCcccccEEEEEEeCC--
Q 029380           43 FGNCTYLVVIKTSCDSK-NFTRDRISIAFGDAYGNQIYAPRLDDPFTKTFQSCSSDGFQIDGPCATDICYVYLHRSGL--  119 (194)
Q Consensus        43 ~~~C~YtV~IkTsC~s~-a~T~d~ISl~FgDa~Gn~V~v~~Ld~p~~~~FErCs~DtF~v~GpCl~~IC~lyL~r~G~--  119 (194)
                      ...|.|+|+|+||.... |||+++|.|.+.+..|..-.+. |+++         .|+|.+...|++++++|.|.+|++  
T Consensus       245 tt~~~Y~V~V~TG~~~gaAGT~anV~I~L~G~~G~S~~~~-L~~~---------~d~F~v~~~~LG~L~~I~I~HDnsG~  314 (384)
T 3cwz_B          245 TILIPYHILIVPSKKLGGSMFTANPWICISGELGETQILQ-IPRN---------VLEMTFECQNLGKLTTVQIGHDNSGL  314 (384)
T ss_dssp             TSEEEEEEEEEECCCCCSCCCCSCEEEEEEESSCBCCCEE-CCTT---------CCEEEEEEECCCSEEEEEEEECCCSS
T ss_pred             ccceeEEEEEEeCCCCCCCCCCCcEEEEEEeCCCCcccEE-eccc---------CceEEEecccCCCceEEEEEECCCCC
Confidence            46799999999999998 6999999999999999986653 7653         689999999999999999999966  


Q ss_pred             -CCceecEEEEecCC-CCceeEEecccCC
Q 029380          120 -DGWEPESVKIISPN-SSPVTYDFNTSAP  146 (194)
Q Consensus       120 -dGW~pe~V~V~~~~-~~~vtF~f~~~LP  146 (194)
                       +|||+++|+|.... .....|..++||-
T Consensus       315 ~p~Wfl~~V~V~d~~tg~~~~Fpc~rWL~  343 (384)
T 3cwz_B          315 YAKWLVECVMVRNEVTGHTYKFPCGRWLG  343 (384)
T ss_dssp             CCCEEEEEEEEEETTTCCEEEEEEEEEES
T ss_pred             CCceeEeEEEEEeCCCCcEEEEECceeCC
Confidence             69999999999874 5678999999994

>2wxu_A Phospholipase C; cytolysis, hydrolase, hemolysis, membrane binding, virulence gangrene determinant, C2 domain; 1.80A {Clostridium perfringens} PDB: 2wy6_A 2wxt_A 1qm6_A 1qmd_A 1ca1_A 1gyg_A 1kho_A

Probab=99.02  E-value=2.1e-09  Score=97.53  Aligned_cols=102  Identities=22%  Similarity=0.280  Sum_probs=88.8

Q ss_pred             CceEEEEEEecCCCCccCCceeEEEEecCCCCeEEecCCCCCCCCCccCccccceeeec---CCc-ccccEEEEEEeCC-
Q 029380           45 NCTYLVVIKTSCDSKNFTRDRISIAFGDAYGNQIYAPRLDDPFTKTFQSCSSDGFQIDG---PCA-TDICYVYLHRSGL-  119 (194)
Q Consensus        45 ~C~YtV~IkTsC~s~a~T~d~ISl~FgDa~Gn~V~v~~Ld~p~~~~FErCs~DtF~v~G---pCl-~~IC~lyL~r~G~-  119 (194)
                      -=.|+|+|+||-.-.|||++.|+|.+-...|..-.-. ||+++ +.|||++.|+|.|.=   +-. ++|=.|-|.+... 
T Consensus       255 ~~~y~V~V~Tg~~~~AGT~~~V~~~lvg~~Ges~~~~-LD~~g-ndFe~G~~d~y~v~~~~~~~~lg~l~~v~l~K~~~~  332 (370)
T 2wxu_A          255 VKELVAYISTSGEKDAGTDDYMYFGIKTKDGKTQEWE-MDNPG-NDFMTGSKDTYTFKLKDENLKIDDIQNMWIRKRKYT  332 (370)
T ss_dssp             CCEEEEEEEECCSTTCSCCSEEEEEEEETTCCEEEEE-CCCSS-CTTCTTCEEEEEEECSCTTCCGGGEEEEEEEEECSS
T ss_pred             ceeEEEEEEcCCcccCCCcceEEEEEEcCCCccchhh-hhCcC-CCcCCCCeeeEEEecCCCccCcCceEEEEEEccCCC
Confidence            4479999999999999999999999999999987765 88875 899999999999954   334 7899999988866 


Q ss_pred             ---CCceecEEEEecCCCCceeEEecccCCCC
Q 029380          120 ---DGWEPESVKIISPNSSPVTYDFNTSAPNE  148 (194)
Q Consensus       120 ---dGW~pe~V~V~~~~~~~vtF~f~~~LP~~  148 (194)
                         |.|+|+||+|..++.....|..++||-.+
T Consensus       333 ~~~D~Wfc~~i~V~~p~~~~~~FP~y~Wi~g~  364 (370)
T 2wxu_A          333 AFPDAYKPENIKIIANGKVVVDKDINEWISGN  364 (370)
T ss_dssp             SSCCCBCEEEEEEEETTEEEEEEECCSCBCTT
T ss_pred             CCCccceeeeEEEEcCCCcEEEeccceeeeCC
Confidence               89999999999988766889999998643

>1olp_A Alpha-toxin; zinc phospholipase C, GAS gangrene determinant, membrane binding, calcium binding, hydrolase; 2.5A {Clostridium absonum} SCOP: a.124.1.1 b.12.1.3

Probab=98.95  E-value=3.2e-09  Score=96.31  Aligned_cols=101  Identities=22%  Similarity=0.297  Sum_probs=88.4

Q ss_pred             CceEEEEEEecCCCCccCCceeEEEEecCCCCeEEecCCCCCCCCCccCccccceeeec---CCc-ccccEEEEEEeCC-
Q 029380           45 NCTYLVVIKTSCDSKNFTRDRISIAFGDAYGNQIYAPRLDDPFTKTFQSCSSDGFQIDG---PCA-TDICYVYLHRSGL-  119 (194)
Q Consensus        45 ~C~YtV~IkTsC~s~a~T~d~ISl~FgDa~Gn~V~v~~Ld~p~~~~FErCs~DtF~v~G---pCl-~~IC~lyL~r~G~-  119 (194)
                      .=.|+|+|+||-.-.|||+|.|+|.+-...|..-.-. ||+++ +.|||++.|+|.|.=   +-. ++|=.|-|.+... 
T Consensus       255 ~n~y~V~V~Tg~~~~AGT~~~V~~~lvg~~Ges~~~~-LD~~g-ndFe~G~~d~y~v~~~~~~~dlg~l~~v~l~K~~~~  332 (370)
T 1olp_A          255 LNEIVVMIKTADVQDAGTDNYIYFGIETKDGVKEEWA-LDNPG-NDFTRNQEGTYTLKLKNKNTKYSDIKNMWIRDEKLT  332 (370)
T ss_dssp             CSEEEEEEEECSSTTCCCCSEEEEEEEETTCCEEEEE-CCCSS-CCSCTTCEEEEEEECSCSSCCGGGEEEEEEEEECSS
T ss_pred             cceEEEEEEcCCcccCCCcceEEEEEEcCCCccchhh-hhCcC-CccCCCCeeEEEEeccCCcCCcCceEEEEEEcCCCC
Confidence            4479999999999999999999999999999998875 88875 899999999999954   333 7888999988776 


Q ss_pred             ---CCceecEEEEecCCCCceeEEecccCCC
Q 029380          120 ---DGWEPESVKIISPNSSPVTYDFNTSAPN  147 (194)
Q Consensus       120 ---dGW~pe~V~V~~~~~~~vtF~f~~~LP~  147 (194)
                         |.|+|+||+|..++.....|..++||-.
T Consensus       333 ~~~D~Wfc~~i~V~~p~~~~~~FP~y~Wi~g  363 (370)
T 1olp_A          333 VATDGWKPSYVKVIAGDKVRLEKNINEWISG  363 (370)
T ss_dssp             SSCCEECEEEEEEEETTEEEEEEECCSCEET
T ss_pred             CCCccceeeeEEEEcCCCcEEEeccceeeeC
Confidence               8999999999998876688999999853

>1bu8_A Protein (pancreatic lipase related protein 2); hydrolase, lipid degradation; HET: NAG; 1.80A {Rattus norvegicus} SCOP: b.12.1.2 c.69.1.19 PDB: 2oxe_A* 2pvs_A 1eth_A*

Probab=94.50  E-value=0.1  Score=46.73  Aligned_cols=107  Identities=11%  Similarity=0.059  Sum_probs=79.2

Q ss_pred             CCceEEEEEEecCCCCccCCceeEEEEecCCCCeEEecCCCCCCCCCccCccccceee-ecCCcccccEEEEEEeC----
Q 029380           44 GNCTYLVVIKTSCDSKNFTRDRISIAFGDAYGNQIYAPRLDDPFTKTFQSCSSDGFQI-DGPCATDICYVYLHRSG----  118 (194)
Q Consensus        44 ~~C~YtV~IkTsC~s~a~T~d~ISl~FgDa~Gn~V~v~~Ld~p~~~~FErCs~DtF~v-~GpCl~~IC~lyL~r~G----  118 (194)
                      ....|.|+|.|+  ..++|+..|.|++....|+.-.. .|.++   .||++++++|-+ ...-+++|=++.|....    
T Consensus       338 ~~~~Y~v~V~~~--~~~~t~g~i~v~L~G~~g~s~~~-~l~~~---~~~~g~~~s~li~~~~dlG~l~~v~~~W~~~~~~  411 (452)
T 1bu8_A          338 TRWRYKVSVTLS--GAKKLSGYILVALYGNNGNSKQY-EIFKG---SLKPEARHVRDIDVDINVGEIQKVKFLWNNKVIN  411 (452)
T ss_dssp             CCEEEEEEEEEE--CSSCEEEEEEEEEEETTEECCCE-EEEEE---EECTTCEEEEEEEESSCCCSEEEEEEEEEC----
T ss_pred             cceeeEEEEEEc--CCCceeeEEEEEEEcCCCCcceE-Eeccc---ccCCCCEEEEEEeCCCCCCCceEEEEEEECCCCC
Confidence            366799999995  46799999999999988875322 23322   599999999998 66788899999866652    


Q ss_pred             --CCCceecEEEEec-CCCCceeEEecccCCCCCceeeccC
Q 029380          119 --LDGWEPESVKIIS-PNSSPVTYDFNTSAPNEDWYGVNLC  156 (194)
Q Consensus       119 --~dGW~pe~V~V~~-~~~~~vtF~f~~~LP~~vwyG~N~C  156 (194)
                        .+.|+.+.|+|.. ......+|=-+.|+-+++--.+.-|
T Consensus       412 ~~~p~~~i~~I~V~~~e~~~~~~FC~~~~~~~~~~~~~~~~  452 (452)
T 1bu8_A          412 LFRPTLGASQITVQSGVDGKEYNFCSSDTVREDVLQSLYPC  452 (452)
T ss_dssp             --CCCBEEEEEEEEETTTCCEEEEECCCCBCTTCCEEEEEC
T ss_pred             CCCCeEEEEEEEEEeCCCCCeEEecCCCccccCceecccCC
Confidence              3799999999974 4454566766777766665544433

>1rp1_A Pancreatic lipase related protein 1; hydrolase, lipid degradation; HET: NAG; 2.10A {Canis lupus familiaris} SCOP: b.12.1.2 c.69.1.19 PDB: 2ppl_A

Probab=93.48  E-value=0.17  Score=45.75  Aligned_cols=106  Identities=10%  Similarity=0.071  Sum_probs=78.3

Q ss_pred             CCceEEEEEEecCCCCccCCceeEEEEecCCCCeEEecCCCCCCCCCccCccccceee-ecCCcccccEEEEEEeC----
Q 029380           44 GNCTYLVVIKTSCDSKNFTRDRISIAFGDAYGNQIYAPRLDDPFTKTFQSCSSDGFQI-DGPCATDICYVYLHRSG----  118 (194)
Q Consensus        44 ~~C~YtV~IkTsC~s~a~T~d~ISl~FgDa~Gn~V~v~~Ld~p~~~~FErCs~DtF~v-~GpCl~~IC~lyL~r~G----  118 (194)
                      ....|.|+|.|+-   +.|+..|.|++....|+.-.. .|.++   .||++++++|-+ ...=+++|=++.|.+..    
T Consensus       337 ~~~~Y~VtV~~~~---~~t~g~i~v~L~G~~g~s~~~-~l~~~---~~~~g~t~s~li~~~~dlG~l~~v~~~W~~~~~~  409 (450)
T 1rp1_A          337 ARWRYGVSITLSG---KRATGQAKVALFGSKGNTHQF-NIFKG---ILKPGSTHSNEFDAKLDVGTIEKVKFLWNNNVVN  409 (450)
T ss_dssp             CCEEEEEEEEEEE---SCEEEEEEEEEEETTEECCCE-EEEEE---EECTTCEEEEEEEESSCCSSEEEEEEEEEEC--C
T ss_pred             ccceeEEEEEEcC---CceeEEEEEEEEcCCCCcceE-Eeccc---ccCCCCEEEEEEECCCCCCCceEEEEEEECCCCC
Confidence            3677999999985   899999999999988875322 23333   699999999998 55566788888866652    


Q ss_pred             --CCCceecEEEEec-CCCCceeEEecccCCCCCceeeccC
Q 029380          119 --LDGWEPESVKIIS-PNSSPVTYDFNTSAPNEDWYGVNLC  156 (194)
Q Consensus       119 --~dGW~pe~V~V~~-~~~~~vtF~f~~~LP~~vwyG~N~C  156 (194)
                        .+.|+.+.|+|.. ......+|==+.|+-+++--.+.-|
T Consensus       410 ~~~p~~~i~~I~V~~~e~~~~~~FC~~~~~~~~~~~~~~~~  450 (450)
T 1rp1_A          410 PTFPKVGAAKITVQKGEEKTVHSFCSESTVREDVLLTLTPC  450 (450)
T ss_dssp             TTCCCEEEEEEEEEETTCSSCEEEECSCEECTTCCEEEEEC
T ss_pred             CCCCeEEEEEEEEEeCCCCCeEEecCCCccccCceecccCC
Confidence              3799999999974 4444566766777766665544433

>1gpl_A RP2 lipase; serine esterase, hydrolase, lipid degradation, pancreas, glycoprotein, chimeric; 2.01A {Cavia porcellus} SCOP: b.12.1.2 c.69.1.19 PDB: 1lpb_B* 1lpa_B* 1n8s_A

Probab=92.54  E-value=0.35  Score=42.67  Aligned_cols=83  Identities=13%  Similarity=0.055  Sum_probs=66.5

Q ss_pred             CCceEEEEEEecCCCCccCCceeEEEEecCCCCeEEecCCCCCCCCCccCccccceee-ecCCcccccEEEEEEeC----
Q 029380           44 GNCTYLVVIKTSCDSKNFTRDRISIAFGDAYGNQIYAPRLDDPFTKTFQSCSSDGFQI-DGPCATDICYVYLHRSG----  118 (194)
Q Consensus        44 ~~C~YtV~IkTsC~s~a~T~d~ISl~FgDa~Gn~V~v~~Ld~p~~~~FErCs~DtF~v-~GpCl~~IC~lyL~r~G----  118 (194)
                      ....|.|+|.|+-   ++|+..|.|++....|+.-.+ .|.++   .||++++++|-+ ...-+++|=++.|.+..    
T Consensus       320 ~~~~Y~v~v~~~~---~~~~g~i~v~L~G~~g~s~~~-~l~~~---~~~~g~~~s~li~~~~~lG~l~~v~~~W~~~~~~  392 (432)
T 1gpl_A          320 TRWRYKVSVTLSG---KKVTGHILVSLFGNKGNSKQY-EIFKG---TLKPDSTHSNEFDSDVDVGDLQMVKFIWYNNVIN  392 (432)
T ss_dssp             CCEEEEEEEEEEE---CCEEEEEEEEEEESSCEEEEE-EEEEE---EECTTCEEEEEEEESSCCCSEEEEEEEEEESSCC
T ss_pred             ccceeEEEEEEcC---CceeEEEEEEEEcCCCCceeE-Eeccc---ccCCCcEEEEEEeCCCCCCCceEEEEEEEcCCCC
Confidence            3667999999986   799999999999999987443 34433   599999999998 66688899999866552    


Q ss_pred             --CCCceecEEEEecCC
Q 029380          119 --LDGWEPESVKIISPN  133 (194)
Q Consensus       119 --~dGW~pe~V~V~~~~  133 (194)
                        .+.|+.+.|+|..-.
T Consensus       393 ~~~~~~~i~~I~v~~~e  409 (432)
T 1gpl_A          393 PTLPRVGASKIIVETNV  409 (432)
T ss_dssp             TTCCEEEEEEEEEECTT
T ss_pred             CCCCeEEEEEEEEEeCC
Confidence              268999999997543

>1hpl_A Lipase; hydrolase(carboxylic esterase); 2.30A {Equus caballus} SCOP: b.12.1.2 c.69.1.19

Probab=92.13  E-value=0.41  Score=43.19  Aligned_cols=84  Identities=12%  Similarity=0.055  Sum_probs=66.6

Q ss_pred             CCceEEEEEEecCCCCccCCceeEEEEecCCCCeEEecCCCCCCCCCccCccccceee-ecCCcccccEEEEEEeC----
Q 029380           44 GNCTYLVVIKTSCDSKNFTRDRISIAFGDAYGNQIYAPRLDDPFTKTFQSCSSDGFQI-DGPCATDICYVYLHRSG----  118 (194)
Q Consensus        44 ~~C~YtV~IkTsC~s~a~T~d~ISl~FgDa~Gn~V~v~~Ld~p~~~~FErCs~DtF~v-~GpCl~~IC~lyL~r~G----  118 (194)
                      ....|.|+|.|+-   ++|+..|.|++....|+.-.. .|.++   .||++++++|-+ ...-+++|=++.|....    
T Consensus       337 ~~~~Y~VtV~~~~---~~t~g~i~v~L~G~~g~s~~~-~l~~~---~~~~g~~~s~li~~~~dlG~l~~v~~~W~~~~~~  409 (449)
T 1hpl_A          337 ARWRYRVDVTLSG---KKVTGHVLVSLFGNKGNSRQY-EIFQG---TLKPDNTYSNEFDSDVEVGDLEKVKFIWYNNVIN  409 (449)
T ss_dssp             CCEEEEEEEEEEE---CCEEEEEEEEEEETTEECCCE-EEEEE---EECSSCEEEEEEEESSCCCSEEEEEEEEEECSCC
T ss_pred             ccceeEEEEEEcC---CceeEEEEEEEEcCCCCceeE-Eeccc---ccCCCcEEEEEEeCCCCCCCceEEEEEEECCCCC
Confidence            4677999999986   899999999999988876322 23333   599999999998 66688899999866552    


Q ss_pred             --CCCceecEEEEecCCCC
Q 029380          119 --LDGWEPESVKIISPNSS  135 (194)
Q Consensus       119 --~dGW~pe~V~V~~~~~~  135 (194)
                        .+.|+.+.|+|.. ...
T Consensus       410 ~~~p~~~i~~I~V~~-e~~  427 (449)
T 1hpl_A          410 LTLPKVGASKITVER-NDG  427 (449)
T ss_dssp             TTCCCEEEEEEEEEC-TTS
T ss_pred             CCCCeEEEEEEEEEe-CCC
Confidence              3699999999988 443

>1w52_X Pancreatic lipase related protein 2; detergent, cleaved flap; HET: DDQ; 2.99A {Equus caballus}

Probab=91.84  E-value=0.069  Score=47.88  Aligned_cols=105  Identities=10%  Similarity=0.046  Sum_probs=78.0

Q ss_pred             CCceEEEEEEecCCCCccCCceeEEEEecCCCCeEEecCCCCCCCCCccCccccceee-ecCCcccccEEEEEEeC----
Q 029380           44 GNCTYLVVIKTSCDSKNFTRDRISIAFGDAYGNQIYAPRLDDPFTKTFQSCSSDGFQI-DGPCATDICYVYLHRSG----  118 (194)
Q Consensus        44 ~~C~YtV~IkTsC~s~a~T~d~ISl~FgDa~Gn~V~v~~Ld~p~~~~FErCs~DtF~v-~GpCl~~IC~lyL~r~G----  118 (194)
                      ....|.|+|.|+  ..++|+..|.|++....|+.-.. .|.++   .||++++++|-+ ...-+++|=++.|.+..    
T Consensus       338 ~~~~Y~v~v~~~--~~~~t~g~i~v~L~G~~g~s~~~-~l~~~---~~~~g~~~s~li~~~~dlG~l~~v~~~W~~~~~~  411 (452)
T 1w52_X          338 TSWRYRVSITLA--GSGKANGYLKVTLRGSNGNSKQY-EIFKG---SLQPDSSYTLDVDVNFIIGKIQEVKFVWNKTVLN  411 (452)
T ss_dssp             CCEEEEECCBCC--SSSCCEECBCCCBCCSSCCCCCC-CCCCE---ECCSSCCCCEEEEESSCCCCCCCBCCCBCCSSCC
T ss_pred             cceeeEEEEEEc--CCcceeeEEEEEEEcCCCCcceE-ecccc---ccCCCCEEEEEEECCCCCCCceEEEEEEECCCCC
Confidence            367799999997  46799999999999999986432 45443   699999999998 56677888888755552    


Q ss_pred             --CCCceecEEEEec-CCCCceeEEecccCCCCCceeec
Q 029380          119 --LDGWEPESVKIIS-PNSSPVTYDFNTSAPNEDWYGVN  154 (194)
Q Consensus       119 --~dGW~pe~V~V~~-~~~~~vtF~f~~~LP~~vwyG~N  154 (194)
                        ...|+.+.|+|.. ......+|==+.|+-+++--.+.
T Consensus       412 ~~~~~~~i~~I~V~~~e~~~~~~fC~~~~~~~~~~~~~~  450 (452)
T 1w52_X          412 LSKPQLGASRITVQSGADGTEYKFCGSGTVQDNVEQSLY  450 (452)
T ss_dssp             SCCCCCCCSBCCCCBSSSCCCCCEECCSCCCSSCCCCCE
T ss_pred             CCCCeEEEEEEEEEeCCCCCeEEecCCCccccCceeccc
Confidence              3699999999974 44444667777777665544433

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	194
d2p0ma2	111	b.12.1.1 (A:2-112) 15-Lipoxygenase {Rabbit (Orycto	0.001

>d2p0ma2 b.12.1.1 (A:2-112) 15-Lipoxygenase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 111

class: All beta proteins
fold: Lipase/lipooxygenase domain (PLAT/LH2 domain)
superfamily: Lipase/lipooxygenase domain (PLAT/LH2 domain)
family: Lipoxigenase N-terminal domain
domain: 15-Lipoxygenase
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 35.4 bits (81), Expect = 0.001
 Identities = 14/107 (13%), Positives = 35/107 (32%), Gaps = 14/107 (13%)

Query: 48  YLVVIKTSCDSKNFTRDRISIAFGDAYGNQIYAPRLDDPFTKTFQSCSSDGFQIDGPCAT 107
           Y V + T       +++++ +     +G            T+       + F+++     
Sbjct: 3   YRVCVSTGASIYAGSKNKVELWLVGQHGEVE--LGSCLRPTRN----KEEEFKVNVSKYL 56

Query: 108 -DICYVYLHRSGL---DGWEPESVKIISPNSSPVTYDFNTSAPNEDW 150
             + +V L +      D W    + + +  ++   Y F    P   W
Sbjct: 57  GSLLFVRLRKKHFLKEDAWFCNWISVQALGAAEDKYWF----PCYRW 99

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	194
d1ca1a2	121	Alpha-toxin, C-terminal domain {Clostridium perfri	99.66
d1olpa2	121	Alpha-toxin, C-terminal domain {Clostridium absonu	99.62
d2p0ma2	111	15-Lipoxygenase {Rabbit (Oryctolagus cuniculus) [T	99.56
d1bu8a1	114	Pancreatic lipase, C-terminal domain {Rat (Rattus	98.7
d1rp1a1	113	Pancreatic lipase, C-terminal domain {Dog (Canis f	98.68
d1gpla1	112	Pancreatic lipase, C-terminal domain {Guinea pig (	98.1

>d1ca1a2 b.12.1.3 (A:250-370) Alpha-toxin, C-terminal domain {Clostridium perfringens, different strains [TaxId: 1502]}

class: All beta proteins
fold: Lipase/lipooxygenase domain (PLAT/LH2 domain)
superfamily: Lipase/lipooxygenase domain (PLAT/LH2 domain)
family: Alpha-toxin, C-terminal domain
domain: Alpha-toxin, C-terminal domain
species: Clostridium perfringens, different strains [TaxId: 1502]

Probab=99.66  E-value=4.3e-16  Score=118.12  Aligned_cols=104  Identities=21%  Similarity=0.291  Sum_probs=90.9

Q ss_pred             ceEEEEEEecCCCCccCCceeEEEEecCCCCeEEecCCCCCCCCCccCccccceeeecCC----cccccEEEEEEeCC--
Q 029380           46 CTYLVVIKTSCDSKNFTRDRISIAFGDAYGNQIYAPRLDDPFTKTFQSCSSDGFQIDGPC----ATDICYVYLHRSGL--  119 (194)
Q Consensus        46 C~YtV~IkTsC~s~a~T~d~ISl~FgDa~Gn~V~v~~Ld~p~~~~FErCs~DtF~v~GpC----l~~IC~lyL~r~G~--  119 (194)
                      =.|+|+|+||-...|||+++|.|.+....|+.-.. .|++|+ +.|||+++|+|.+..+.    ++.|.+|.|.+++.  
T Consensus         7 ~~~~v~V~TG~~~~AGTda~V~i~l~G~~G~s~~~-~L~~~~-~~Ferg~~d~F~v~~~d~~~~lG~i~ki~i~hd~~g~   84 (121)
T d1ca1a2           7 KELVAYISTSGEKDAGTDDYMYFGIKTKDGKTQEW-EMDNPG-NDFMTGSKDTYTFKLKDENLKIDDIQNMWIRKRKYTA   84 (121)
T ss_dssp             CEEEEEEEECCSTTCCCCSEEEEEEEETTSCEEEE-ECCCSS-SCSCTTCEEEEEEECSCSSCCGGGEEEEEEEEECSSS
T ss_pred             eeEEEEEEeCCCCCCCCCCeEEEEEEeCCCCeeeE-EecCCC-ccccCCcEEEEEEEeCCcCCCcCCceEEEEEEcCccc
Confidence            36999999999999999999999999999987765 788875 67999999999998876    78999999999854  


Q ss_pred             --CCceecEEEEecCCCCceeEEecccCCCCCce
Q 029380          120 --DGWEPESVKIISPNSSPVTYDFNTSAPNEDWY  151 (194)
Q Consensus       120 --dGW~pe~V~V~~~~~~~vtF~f~~~LP~~vwy  151 (194)
                        ++|++++|+|.........|.+|+||-.+-.|
T Consensus        85 ~~~~W~l~~V~v~~~~~~~~~F~~nrWl~~~~~~  118 (121)
T d1ca1a2          85 FPDAYKPENIKVIANGKVVVDKDINEWISGNSTY  118 (121)
T ss_dssp             SCCCBCEEEEEEEETTEEEEEEECCSCBCSSCEE
T ss_pred             cCchhheEEEEEECCCCeEEEeECCEEECCCCEE
Confidence              57999999997666667899999999766544

>d1olpa2 b.12.1.3 (A:250-370) Alpha-toxin, C-terminal domain {Clostridium absonum [TaxId: 29369]}

class: All beta proteins
fold: Lipase/lipooxygenase domain (PLAT/LH2 domain)
superfamily: Lipase/lipooxygenase domain (PLAT/LH2 domain)
family: Alpha-toxin, C-terminal domain
domain: Alpha-toxin, C-terminal domain
species: Clostridium absonum [TaxId: 29369]

Probab=99.62  E-value=1e-15  Score=115.81  Aligned_cols=103  Identities=21%  Similarity=0.299  Sum_probs=89.1

Q ss_pred             eEEEEEEecCCCCccCCceeEEEEecCCCCeEEecCCCCCCCCCccCccccceeeecCC----cccccEEEEEEeC--C-
Q 029380           47 TYLVVIKTSCDSKNFTRDRISIAFGDAYGNQIYAPRLDDPFTKTFQSCSSDGFQIDGPC----ATDICYVYLHRSG--L-  119 (194)
Q Consensus        47 ~YtV~IkTsC~s~a~T~d~ISl~FgDa~Gn~V~v~~Ld~p~~~~FErCs~DtF~v~GpC----l~~IC~lyL~r~G--~-  119 (194)
                      .|.|+|+||-...|||+++|.|.+....|+.-.+ .|+.++ +.|||+++|+|.+..+-    +++|.+|.|.+++  . 
T Consensus         8 ~~~V~v~Tg~~~~AGT~a~V~i~l~G~~g~s~~~-~L~~~~-~~Ferg~~d~F~v~~~d~~~~lG~i~~i~i~hd~~g~~   85 (121)
T d1olpa2           8 EIVVMIKTADVQDAGTDNYIYFGIETKDGVKEEW-ALDNPG-NDFTRNQEGTYTLKLKNKNTKYSDIKNMWIRDEKLTVA   85 (121)
T ss_dssp             EEEEEEEECSSTTCCCCSEEEEEEEETTCCEEEE-ECCCSS-CCSCTTCEEEEEEECSCSSCCGGGEEEEEEEEECSSSS
T ss_pred             EEEEEEEECCCCCCCCcceEEEEEEECCCCcccE-EecCCC-cccccCCeEEEEEEeCCccCCcCceEEEEEEEcCCCCC
Confidence            6999999999999999999999999999987776 588874 68999999999998775    6899999999984  2 


Q ss_pred             -CCceecEEEEecCCCCceeEEecccCCCCCce
Q 029380          120 -DGWEPESVKIISPNSSPVTYDFNTSAPNEDWY  151 (194)
Q Consensus       120 -dGW~pe~V~V~~~~~~~vtF~f~~~LP~~vwy  151 (194)
                       ++|++++|+|.........|.+|+||-.+-.|
T Consensus        86 ~~~W~l~~V~v~~~~~~~~~F~~nrWl~~~~~~  118 (121)
T d1olpa2          86 TDGWKPSYVKVIAGDKVRLEKNINEWISGGTTY  118 (121)
T ss_dssp             CCEECEEEEEEEETTEEEEEEECCSCEETTEEE
T ss_pred             CcceeEEEEEEECCCCeEEEEECCEEECCCcEE
Confidence             57999999997665567889999999765444

>d2p0ma2 b.12.1.1 (A:2-112) 15-Lipoxygenase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: All beta proteins
fold: Lipase/lipooxygenase domain (PLAT/LH2 domain)
superfamily: Lipase/lipooxygenase domain (PLAT/LH2 domain)
family: Lipoxigenase N-terminal domain
domain: 15-Lipoxygenase
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.56  E-value=1.4e-14  Score=107.27  Aligned_cols=94  Identities=10%  Similarity=0.139  Sum_probs=83.1

Q ss_pred             eEEEEEEecCCCCccCCceeEEEEecCCCCeEEecCCCCCCCCCccCccccceeeecCC-cccccEEEEEEeCC---CCc
Q 029380           47 TYLVVIKTSCDSKNFTRDRISIAFGDAYGNQIYAPRLDDPFTKTFQSCSSDGFQIDGPC-ATDICYVYLHRSGL---DGW  122 (194)
Q Consensus        47 ~YtV~IkTsC~s~a~T~d~ISl~FgDa~Gn~V~v~~Ld~p~~~~FErCs~DtF~v~GpC-l~~IC~lyL~r~G~---dGW  122 (194)
                      .|+|+|+||-...|||+++|.|.+.+..|..-.. .|     +.|||.++|.|.+..+. +++|.+|.|.+++.   ++|
T Consensus         2 ~Y~I~v~TG~~~~AGT~a~V~i~l~G~~G~s~~~-~l-----~~f~rg~~d~F~~~~~~~lG~i~~i~i~~d~~g~~~~W   75 (111)
T d2p0ma2           2 VYRVCVSTGASIYAGSKNKVELWLVGQHGEVELG-SC-----LRPTRNKEEEFKVNVSKYLGSLLFVRLRKKHFLKEDAW   75 (111)
T ss_dssp             EEEEEEEECSSSSCCCSSEEEEEEEESSCEEEEE-EE-----ECCCTTCEEEEEEECSSCCCSEEEEEEEEECSSSCCCE
T ss_pred             eEEEEEEECCCCCCCCCCeEEEEEEECCCCCCCc-Cc-----cccccCcEEEEEEEeeccccceEEEEEEECCCCCCCCe
Confidence            5999999999999999999999999999987654 34     34999999999999885 79999999999975   799


Q ss_pred             eecEEEEecC--CCCceeEEecccCC
Q 029380          123 EPESVKIISP--NSSPVTYDFNTSAP  146 (194)
Q Consensus       123 ~pe~V~V~~~--~~~~vtF~f~~~LP  146 (194)
                      ++++|+|...  ......|-+++||-
T Consensus        76 ~l~~V~V~~~~~~~~~~~Fpc~~Wl~  101 (111)
T d2p0ma2          76 FCNWISVQALGAAEDKYWFPCYRWVV  101 (111)
T ss_dssp             EEEEEEEEESSSSCCCEEEEEEEEEC
T ss_pred             EEEEEEEEecCCCCeEEEEEcCceEC
Confidence            9999999865  34568899999995

>d1bu8a1 b.12.1.2 (A:337-449) Pancreatic lipase, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Lipase/lipooxygenase domain (PLAT/LH2 domain)
superfamily: Lipase/lipooxygenase domain (PLAT/LH2 domain)
family: Colipase-binding domain
domain: Pancreatic lipase, C-terminal domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.70  E-value=2e-08  Score=73.88  Aligned_cols=100  Identities=12%  Similarity=0.009  Sum_probs=78.2

Q ss_pred             eEEEEEEecCCCCccCCceeEEEEecCCCCeEEecCCCCCCCCCccCccccceeeecC-CcccccEEEEEEeCC---CCc
Q 029380           47 TYLVVIKTSCDSKNFTRDRISIAFGDAYGNQIYAPRLDDPFTKTFQSCSSDGFQIDGP-CATDICYVYLHRSGL---DGW  122 (194)
Q Consensus        47 ~YtV~IkTsC~s~a~T~d~ISl~FgDa~Gn~V~v~~Ld~p~~~~FErCs~DtF~v~Gp-Cl~~IC~lyL~r~G~---dGW  122 (194)
                      .|.|.|+||-  .++|+++|.|.+....|+.=.+ .|.   .+.|||+++|+|.+..+ -++++=++.+.+|++   ++|
T Consensus         3 rY~V~V~t~~--~~gT~~~V~i~L~G~~G~s~~~-~l~---~~~f~rG~~~~f~~~~~~~lG~l~~i~i~hdn~g~~~~W   76 (114)
T d1bu8a1           3 RYKVSVTLSG--AKKLSGYILVALYGNNGNSKQY-EIF---KGSLKPEARHVRDIDVDINVGEIQKVKFLWNNKVINLFR   76 (114)
T ss_dssp             EEEEEEEEEC--SSCEEEEEEEEEEETTEECCCE-EEE---EEEECTTCEEEEEEEESSCCCSEEEEEEEEEC------C
T ss_pred             EEEEEEEECC--CCCcCceEEEEEEeCCCCcccC-ccc---hhhccCCCceEEEEecCcCCCCcEEEEEEECCCcCCCcc
Confidence            5999999984  5799999999999999974222 232   35699999999999985 899999999999965   588


Q ss_pred             ---eecEEEEecCC-CCceeEEecccCCCCCcee
Q 029380          123 ---EPESVKIISPN-SSPVTYDFNTSAPNEDWYG  152 (194)
Q Consensus       123 ---~pe~V~V~~~~-~~~vtF~f~~~LP~~vwyG  152 (194)
                         +.+.|+|.... ....+|=.+.|+.+++-..
T Consensus        77 ~~~~l~~V~V~~~~~g~~~~Fc~~~~v~~~~~~~  110 (114)
T d1bu8a1          77 PTLGASQITVQSGVDGKEYNFCSSDTVREDVLQS  110 (114)
T ss_dssp             CCBEEEEEEEEETTTCCEEEEECCCCBCTTCCEE
T ss_pred             cccceEEEEEEeCCCCCEEEEecCceEcCCceee
Confidence               58999998763 4567777788988776543

>d1rp1a1 b.12.1.2 (A:337-449) Pancreatic lipase, C-terminal domain {Dog (Canis familiaris) [TaxId: 9615]}

class: All beta proteins
fold: Lipase/lipooxygenase domain (PLAT/LH2 domain)
superfamily: Lipase/lipooxygenase domain (PLAT/LH2 domain)
family: Colipase-binding domain
domain: Pancreatic lipase, C-terminal domain
species: Dog (Canis familiaris) [TaxId: 9615]

Probab=98.68  E-value=1.7e-08  Score=74.44  Aligned_cols=101  Identities=11%  Similarity=0.070  Sum_probs=80.4

Q ss_pred             eEEEEEEecCCCCccCCceeEEEEecCCCCeEEecCCCCCCCCCccCccccceeeec-CCcccccEEEEEEeCC---CCc
Q 029380           47 TYLVVIKTSCDSKNFTRDRISIAFGDAYGNQIYAPRLDDPFTKTFQSCSSDGFQIDG-PCATDICYVYLHRSGL---DGW  122 (194)
Q Consensus        47 ~YtV~IkTsC~s~a~T~d~ISl~FgDa~Gn~V~v~~Ld~p~~~~FErCs~DtF~v~G-pCl~~IC~lyL~r~G~---dGW  122 (194)
                      .|.|.|+||   .|+|+++|.|.+....|+.=.+ .|.   .+.|||+++|+|.+.. ..++++=++.+.+|.+   ++|
T Consensus         3 rY~V~V~t~---gagT~a~v~i~L~G~~g~t~~~-~l~---~~~f~~g~~~~f~i~~~~~lG~l~~v~i~hdn~g~~~~w   75 (113)
T d1rp1a1           3 RYGVSITLS---GKRATGQAKVALFGSKGNTHQF-NIF---KGILKPGSTHSNEFDAKLDVGTIEKVKFLWNNNVVNPTF   75 (113)
T ss_dssp             EEEEEEEEE---ESCEEEEEEEEEEETTEECCCE-EEE---EEEECTTCEEEEEEEESSCCSSEEEEEEEEEEC--CTTC
T ss_pred             EEEEEEEEC---CCCccceEEEEEEcCCCCcccE-EEc---ceeEcCCCEEEEEEEeCCCCCCcEEEEEEECCCCCCCcc
Confidence            599999998   6899999999999999874322 332   2469999999999986 5999999999999954   588


Q ss_pred             ---eecEEEEecC-CCCceeEEecccCCCCCceeec
Q 029380          123 ---EPESVKIISP-NSSPVTYDFNTSAPNEDWYGVN  154 (194)
Q Consensus       123 ---~pe~V~V~~~-~~~~vtF~f~~~LP~~vwyG~N  154 (194)
                         +.+.|+|... .....+|=-+.|+.+++-..-.
T Consensus        76 ~~~~v~~V~V~~~~~g~~~~Fc~~~~v~~~v~~~l~  111 (113)
T d1rp1a1          76 PKVGAAKITVQKGEEKTVHSFCSESTVREDVLLTLT  111 (113)
T ss_dssp             CCEEEEEEEEEETTCSSC-EEECSCEECTTCCEEEE
T ss_pred             ccceeEEEEEEcCCCCcEEEECcCceEccCceeccc
Confidence               9999999765 4666888778888877655433

>d1gpla1 b.12.1.2 (A:337-449) Pancreatic lipase, C-terminal domain {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: All beta proteins
fold: Lipase/lipooxygenase domain (PLAT/LH2 domain)
superfamily: Lipase/lipooxygenase domain (PLAT/LH2 domain)
family: Colipase-binding domain
domain: Pancreatic lipase, C-terminal domain
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=98.10  E-value=3.5e-06  Score=62.31  Aligned_cols=80  Identities=14%  Similarity=0.071  Sum_probs=66.3

Q ss_pred             eEEEEEEecCCCCccCCceeEEEEecCCCCeEEecCCCCCCCCCccCccccceeeecC-CcccccEEEEEEeCC---CCc
Q 029380           47 TYLVVIKTSCDSKNFTRDRISIAFGDAYGNQIYAPRLDDPFTKTFQSCSSDGFQIDGP-CATDICYVYLHRSGL---DGW  122 (194)
Q Consensus        47 ~YtV~IkTsC~s~a~T~d~ISl~FgDa~Gn~V~v~~Ld~p~~~~FErCs~DtF~v~Gp-Cl~~IC~lyL~r~G~---dGW  122 (194)
                      .|.|.|+||   .++|+++|.|.+....|+.=.. .|.++   .|||+++|+|.+.-| .++++-++.+.++-+   ++|
T Consensus         3 rY~V~V~t~---g~~T~~~V~i~L~G~~G~s~~~-~L~~~---~f~~g~t~tf~i~~~~~lG~l~~v~~~hdnsg~~~~w   75 (112)
T d1gpla1           3 RYKVSVTLS---GKKVTGHILVSLFGNKGNSKQY-EIFKG---TLKPDSTHSNEFDSDVDVGDLQMVKFIWYNNVINPTL   75 (112)
T ss_dssp             EEEEEEEEE---ECCEEEEEEEEEEESSCEEEEE-EEEEE---EECTTCEEEEEEEESSCCCSEEEEEEEEEESSCCTTC
T ss_pred             EEEEEEEEc---CCCccceEEEEEEECCCCcccE-EEcCc---cccCCCEEEEEEEeCCCCCCcEEEEEEECCCCCCCCc
Confidence            599999997   4689999999999999976433 45433   599999999999886 899999999999943   699


Q ss_pred             e---ecEEEEecCC
Q 029380          123 E---PESVKIISPN  133 (194)
Q Consensus       123 ~---pe~V~V~~~~  133 (194)
                      +   .+.|+|....
T Consensus        76 ~~~~~~~I~V~~g~   89 (112)
T d1gpla1          76 PRVGASKIIVETNV   89 (112)
T ss_dssp             CEEEEEEEEEECTT
T ss_pred             ccccCEEEEEECCC
Confidence            8   7888887543