Citrus Sinensis ID: 029385

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190----
Protein Sequence
MKESVENPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVVPLAGDAVRIRSCTSTVNCNFHQQQIQQEPQINPQSCLSDSIHAKEDFLHFAS
Secondary Structure (PSIPRED)
ccccccccccccEEcEEEEEcccHHHHHHHHHHHccccccccccccccccEEEEEccEEEEEEEcccccccccccccccccccccccccccHHHHHHHHHHcccEEEEEccccccccEEEEEEEcccccEEEEEcccccccccccccccccccccccccHHHHHHHHccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccHHcHcHHEEEHHcHHHHHHHHHHHccccccccccccccccEEEEEcccEEEEEEcccccccccccccccccccEEEEEEccHHHHHHHHHHccccEEEEEcccccccEEEEEEEcccccEEEEEccccccEEEccccccccccccccccHHHccccccccccccccccccccEEccHHHHHccc
Coil and Loop (DISEMBL)
mkesvenplclkslnHISLVCRSVEASLDFYQNVLgffpirrpgsfdfdgawlFNYGMgihllkseepdnlpkagkninpkdnhisfqcENMAIVERRLKEMKIDYVKSRveegginvdqlffhdpdgsmieicncdvlpvvplagdavrirsctstvncnfhqqqiqqepqinpqsclsdsihakedflhfas
Flexible Loop (DISEMBL)
MKESVENPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNLPKAGKninpkdnhisfQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVVPLAGDAVRIRSCTSTVNCNFHQQQIQQEPQINPQSCLSDSIHAKEDFLHFAS
Low Complexity Region (SEG)
MKESVENPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVVPLAGDAVRIRSCTSTVNCNFHqqqiqqepqinpqSCLSDSIHAKEDFLHFAS
Disordered region (IsUnstruct)
********LCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLK*******************HISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVVPLAGDAVRIRSCTSTVNCNFHQQ*****************************
Disordered Region (DISOPRED)
***********KSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDN**KA**NINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVVPLAGDAV***********************************A*E*FLHFA*
Disordered Region (DISEMBL)
********LCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVVPLAGDAVRIRSCTSTVNCNFHQQQIQQEPQINPQSCLSDSIHAKEDFLHFAS
Disordered Region (DISPRO)
*******PLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVVPLAGDAVRIRSCTSTVNCN**********************H*K*DFLHFAS
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MKESVENPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVVPLAGDAVRIRSCTSTVNCNFHQQQIQQEPQINPQSCLSDSIHAKEDFLHFAS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	194	2.2.26 [Sep-21-2011]
Q28CR0	160	Glyoxalase domain-contain	yes	no	0.592	0.718	0.253	1e-05
O31817	144	Metallothiol transferase	yes	no	0.577	0.777	0.284	2e-05
Q65KJ5	154	Metallothiol transferase	yes	no	0.618	0.779	0.269	0.0001
Q502D1	163	Glyoxalase domain-contain	yes	no	0.592	0.705	0.246	0.0002
Q8CXK5	139	Metallothiol transferase	yes	no	0.577	0.805	0.253	0.0004
A4IS40	140	Metallothiol transferase	no	no	0.577	0.8	0.269	0.0008

>sp|Q28CR0|GLOD5_XENTR Glyoxalase domain-containing protein 5 OS=Xenopus tropicalis GN=glod5 PE=2 SV=1

 Score = 50.1 bits (118), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 65/138 (47%), Gaps = 23/138 (16%)

Query: 8   PLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEE 67
           P C++ L+H+ L  RS++ +++FY  VLG       G     G    ++GM        +
Sbjct: 28  PFCIQRLDHLVLTVRSLDRTINFYTKVLGMEATTFKG-----GRKALSFGM--------Q 74

Query: 68  PDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKS---RVEEGGIN------- 117
             NL +AGK   PK +  S    ++ ++        + ++K+    VEEG ++       
Sbjct: 75  KINLHEAGKEFEPKASVPSPGSADLCLITETPLSTVVQHLKACGVPVEEGPVSRTGAVGE 134

Query: 118 VDQLFFHDPDGSMIEICN 135
           +  ++  DPD ++IE+ N
Sbjct: 135 IISVYMRDPDQNLIEVSN 152

Xenopus tropicalis (taxid: 8364)

>sp|O31817|FOSB_BACSU Metallothiol transferase FosB OS=Bacillus subtilis (strain 168) GN=fosB PE=1 SV=1

 Score = 48.9 bits (115), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 59/130 (45%), Gaps = 18/130 (13%)

Query: 9   LCLKSLNHISLVCRSVEASLDFYQNVLG---FFPIRRPGSFDFDGAWLFNYGMGIHLLKS 65
           + +K +NH+      ++ S+DFYQ V G       R    FD +G W         L  +
Sbjct: 1   MEIKGINHLLFSVSHLDTSIDFYQKVFGAKLLVKGRTTAYFDMNGIW---------LALN 51

Query: 66  EEPDNLPKAGKNINPKDNHISFQCENMAIVE--RRLKEMKIDYVKSRVEEGGINVDQLFF 123
           EEPD +P+   +I     HI+F  E+    E   +LK + ++ +  R E    +   ++F
Sbjct: 52  EEPD-IPR--NDIKLSYTHIAFTIEDHEFEEMSAKLKRLHVNILPGR-ERDERDRKSIYF 107

Query: 124 HDPDGSMIEI 133
            DPDG   E 
Sbjct: 108 TDPDGHKFEF 117

Metallothiol transferase which confers resistance to fosfomycin by catalyzing the addition of a thiol cofactor to fosfomycin. L-cysteine is probably the physiological thiol donor.

Bacillus subtilis (strain 168) (taxid: 224308)

EC: 2

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: -

>sp|Q65KJ5|FOSB_BACLD Metallothiol transferase FosB OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=fosB PE=3 SV=1

 Score = 46.2 bits (108), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 62/141 (43%), Gaps = 21/141 (14%)

Query: 5   VENPLCLKSLNHISLVCRSVEASLDFYQNVL---GFFPIRRPGSFDFDGAWL-FNYGMGI 60
           +EN   L  +NH+      +  S+ FY+ V          +   FD +G WL FN     
Sbjct: 1   MENNKIL-GINHLLFSVSDLSVSISFYEKVFDAKWLVKAEKTAYFDLNGIWLAFN----- 54

Query: 61  HLLKSEEPDNLPKAGKNINPKDNHISF--QCENMAIVERRLKEMKIDYVKSRVEEGGINV 118
                EE D      + I+    HI+F  Q E++   E++L ++ ++ +K R    G + 
Sbjct: 55  -----EEKD---IKRQEIHDSYTHIAFSIQQEDLPFWEKKLHDLGVNVLKGRKRHEG-DR 105

Query: 119 DQLFFHDPDGSMIEICNCDVL 139
           D ++F DPDG   E+    V 
Sbjct: 106 DSIYFSDPDGHKFELHTGSVF 126

Metallothiol transferase which confers resistance to fosfomycin by catalyzing the addition of a thiol cofactor to fosfomycin. L-cysteine is probably the physiological thiol donor.

Bacillus licheniformis (strain DSM 13 / ATCC 14580) (taxid: 279010)

EC: 2

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: -

>sp|Q502D1|GLOD5_DANRE Glyoxalase domain-containing protein 5 OS=Danio rerio GN=glod5 PE=2 SV=1

 Score = 45.8 bits (107), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/138 (24%), Positives = 64/138 (46%), Gaps = 23/138 (16%)

Query: 8   PLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEE 67
           P+ +  L+H+ L  R +  +  FY  VLG   +    +F  D   L ++G        E+
Sbjct: 36  PVLISHLDHLVLTVRDLNKTTKFYSEVLGMEVV----TFKGDRKAL-SFG--------EQ 82

Query: 68  PDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKS---RVEEGGIN------- 117
             NL + GK   PK    +    ++ ++ +   +   D++K+    +EEG ++       
Sbjct: 83  KINLHQVGKEFEPKAQTPTPGSADLCLITKTPLKAVADHLKACGVTIEEGPVDRTGAVGP 142

Query: 118 VDQLFFHDPDGSMIEICN 135
           +  L+F DPD ++IE+ N
Sbjct: 143 ISSLYFRDPDDNLIEVSN 160

Danio rerio (taxid: 7955)

>sp|Q8CXK5|FOSB_OCEIH Metallothiol transferase FosB OS=Oceanobacillus iheyensis (strain DSM 14371 / JCM 11309 / KCTC 3954 / HTE831) GN=fosB PE=3 SV=2

 Score = 44.7 bits (104), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/130 (25%), Positives = 55/130 (42%), Gaps = 18/130 (13%)

Query: 9   LCLKSLNHISLVCRSVEASLDFYQNVLG---FFPIRRPGSFDFDGAWLFNYGMGIHLLKS 65
           + +K LNH+     ++E S+DFYQ V         R    FD +G W          L  
Sbjct: 1   MNIKGLNHLLFSVSNLEQSIDFYQQVFDAKLLVKGRSTAYFDLNGIW----------LAL 50

Query: 66  EEPDNLPKAGKNINPKDNHISFQCENMAIVE--RRLKEMKIDYVKSRVEEGGINVDQLFF 123
            E  ++P+    IN    H +F  +   +    + LK + ++ ++ R E    +   ++F
Sbjct: 51  NEEKHIPR--NEINESYTHTAFSIDESELESAIQHLKALNVNILEGR-ERAEQDKQSIYF 107

Query: 124 HDPDGSMIEI 133
            DPDG   E 
Sbjct: 108 TDPDGHKFEF 117

Metallothiol transferase which confers resistance to fosfomycin by catalyzing the addition of a thiol cofactor to fosfomycin. L-cysteine is probably the physiological thiol donor.

Oceanobacillus iheyensis (strain DSM 14371 / JCM 11309 / KCTC 3954 / HTE831) (taxid: 221109)

EC: 2

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: -

>sp|A4IS40|FOSB_GEOTN Metallothiol transferase FosB OS=Geobacillus thermodenitrificans (strain NG80-2) GN=fosB PE=3 SV=1

 Score = 43.5 bits (101), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 59/130 (45%), Gaps = 18/130 (13%)

Query: 9   LCLKSLNHISLVCRSVEASLDFYQNVLG---FFPIRRPGSFDFDGAWLFNYGMGIHLLKS 65
           + +  +NH++     +E S+ FYQNV G       R    FD +G WL         L  
Sbjct: 1   MRIGGINHLTFSVSDLEKSIHFYQNVFGAKLLVKGRNLAYFDLNGIWL--------ALNV 52

Query: 66  EEPDNLPKAGKNINPKDNHISFQC--ENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFF 123
           ++  ++P+   +I     HI+F    E+   V  +LKE+ ++ +  R E    +   ++F
Sbjct: 53  QQ--DIPR--NDIQHSYTHIAFSVKEEDFDHVVEKLKELGVNILPGR-ERDERDKRSVYF 107

Query: 124 HDPDGSMIEI 133
            DPDG   E 
Sbjct: 108 TDPDGHKFEF 117

Metallothiol transferase which confers resistance to fosfomycin by catalyzing the addition of a thiol cofactor to fosfomycin. L-cysteine is probably the physiological thiol donor.

Geobacillus thermodenitrificans (strain NG80-2) (taxid: 420246)

EC: 2

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	194
225445448	195	PREDICTED: metallothiol transferase fosB	0.824	0.820	0.770	1e-66
255566967	193	lactoylglutathione lyase, putative [Rici	0.824	0.829	0.746	2e-65
255636198	172	unknown [Glycine max]	0.845	0.953	0.726	2e-64
194466169	181	lactoylglutathione lyase [Arachis hypoga	0.922	0.988	0.666	5e-64
255553127	172	lactoylglutathione lyase, putative [Rici	0.865	0.976	0.706	8e-64
351723359	172	uncharacterized protein LOC100306100 [Gl	0.783	0.883	0.741	4e-63
449436156	169	PREDICTED: uncharacterized protein LOC10	0.783	0.899	0.748	2e-62
388506784	172	unknown [Lotus japonicus] gi|388522799|g	0.783	0.883	0.735	7e-62
317106739	172	JHL06P13.16 [Jatropha curcas]	0.783	0.883	0.729	2e-61
351721390	173	uncharacterized protein LOC100305695 [Gl	0.840	0.942	0.690	4e-61

>gi|225445448|ref|XP_002285087.1| PREDICTED: metallothiol transferase fosB [Vitis vinifera] gi|147821406|emb|CAN63501.1| hypothetical protein VITISV_011676 [Vitis vinifera] gi|297738928|emb|CBI28173.3| unnamed protein product [Vitis vinifera]

 Score =  257 bits (657), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 124/161 (77%), Positives = 138/161 (85%), Gaps = 1/161 (0%)

Query: 1   MKESVENPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGI 60
           M+   ENPL LKS+NHISLVCRSVE SLDFYQ VLGFF IRRPGSFDFDGAWL+NYGMGI
Sbjct: 1   MEGRAENPLRLKSVNHISLVCRSVEKSLDFYQKVLGFFSIRRPGSFDFDGAWLYNYGMGI 60

Query: 61  HLLKSEEPDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQ 120
           HLL+SE+PDN+PK  + INPKDNHISFQCE+MA VE++LKEMKI+YV+SRVEEGGI VDQ
Sbjct: 61  HLLQSEDPDNMPKISQQINPKDNHISFQCESMATVEKKLKEMKIEYVQSRVEEGGICVDQ 120

Query: 121 LFFHDPDGSMIEICNCDVLPVVPLAGDAVRIRSCTSTVNCN 161
           LFFHDPDGSMIEICNCD LPV+PL G       C S +NCN
Sbjct: 121 LFFHDPDGSMIEICNCDNLPVIPLGGGGGDTTLC-SRINCN 160

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255566967|ref|XP_002524466.1| lactoylglutathione lyase, putative [Ricinus communis] gi|223536254|gb|EEF37906.1| lactoylglutathione lyase, putative [Ricinus communis]

 Score =  253 bits (647), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 124/166 (74%), Positives = 146/166 (87%), Gaps = 6/166 (3%)

Query: 1   MKESVEN-PLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMG 59
           MK S++N PL LKSLNHIS+VCRS++ S+DFYQ+VLGFFP+RRPGSFDFDGAWLFNYG+G
Sbjct: 1   MKGSIKNNPLQLKSLNHISVVCRSLKKSIDFYQDVLGFFPVRRPGSFDFDGAWLFNYGIG 60

Query: 60  IHLLKSEEPDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVD 119
           IHLL+SE+P+N+PK  + INPKDNHISFQCE+MA VE+RL+EMK++ VK RVEEGGI VD
Sbjct: 61  IHLLQSEDPENMPKINQ-INPKDNHISFQCESMATVEKRLQEMKVECVKGRVEEGGIYVD 119

Query: 120 QLFFHDPDGSMIEICNCDVLPVVPLAGD---AVRIRSCTSTVNCNF 162
           QLFFHDPDGSMIEICNCDVLPV+PL GD    V +RSC S +NCN 
Sbjct: 120 QLFFHDPDGSMIEICNCDVLPVIPLGGDNNNNVMVRSC-SLLNCNI 164

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255636198|gb|ACU18440.1| unknown [Glycine max]

 Score =  251 bits (640), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 122/168 (72%), Positives = 139/168 (82%), Gaps = 4/168 (2%)

Query: 1   MKESVENPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGI 60
           MKESV NPL L+S+NHISL+CRSVE S+DFYQNVLGF+PIRRPGS DFDGAWLF YG+GI
Sbjct: 1   MKESVGNPLRLQSVNHISLICRSVEQSMDFYQNVLGFYPIRRPGSLDFDGAWLFGYGIGI 60

Query: 61  HLLKSEEPDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQ 120
           HLL++E P+ LPK  K INPKDNHISFQCE+M  VE++LKEM+IDYV++ VEEGGI VDQ
Sbjct: 61  HLLEAENPEKLPKK-KEINPKDNHISFQCESMVAVEKKLKEMEIDYVRATVEEGGIQVDQ 119

Query: 121 LFFHDPDGSMIEICNCDVLPVVPLAGDAVRIRSCTSTVNCNFHQQQIQ 168
           LFFHDPDG MIEICNCD LPV+PL G+    RSC S VN    Q Q Q
Sbjct: 120 LFFHDPDGFMIEICNCDSLPVIPLVGEVA--RSC-SLVNLEKMQNQQQ 164

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|194466169|gb|ACF74315.1| lactoylglutathione lyase [Arachis hypogaea]

 Score =  249 bits (635), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 122/183 (66%), Positives = 147/183 (80%), Gaps = 4/183 (2%)

Query: 1   MKESVENPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGI 60
           MKES+ NPL LKSLNHISLVCRSVE S+DFYQNVLGFFPIRRPGSFDFDGAWLF +G+GI
Sbjct: 1   MKESMGNPLQLKSLNHISLVCRSVEQSMDFYQNVLGFFPIRRPGSFDFDGAWLFGFGIGI 60

Query: 61  HLLKSEEPDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQ 120
           HLL++E+P+ LPK  K INPKDNHISFQCE M  VE++LKEM I++V++RVEEGGI VDQ
Sbjct: 61  HLLQAEDPEKLPKK-KEINPKDNHISFQCECMEAVEKKLKEMDINHVRARVEEGGIQVDQ 119

Query: 121 LFFHDPDGSMIEICNCDVLPVVPLAGDAVRIRSCTSTVNCNFHQQQIQQEPQINPQSCLS 180
           LFFHDPDG M+EICNC+ LPV+PL G+    RSC+  +  + H+ +    PQ+     L+
Sbjct: 120 LFFHDPDGFMVEICNCECLPVIPLVGEVA--RSCSRVIMTHHHRFRTWS-PQLPAGKPLT 176

Query: 181 DSI 183
           D I
Sbjct: 177 DII 179

Source: Arachis hypogaea

Species: Arachis hypogaea

Genus: Arachis

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255553127|ref|XP_002517606.1| lactoylglutathione lyase, putative [Ricinus communis] gi|223543238|gb|EEF44770.1| lactoylglutathione lyase, putative [Ricinus communis]

 Score =  248 bits (633), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 123/174 (70%), Positives = 144/174 (82%), Gaps = 6/174 (3%)

Query: 1   MKESVENPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGI 60
           MKE+  NPL LKSLNHISL+CRSVE S+DFYQNVLGF PIRRPGSFDFDGAWLF +G+GI
Sbjct: 1   MKENTGNPLHLKSLNHISLLCRSVEESIDFYQNVLGFVPIRRPGSFDFDGAWLFGFGIGI 60

Query: 61  HLLKSEEPDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQ 120
           HLL+SE+P+N+PK  + INPKDNHISFQCE+M  VE++LKEM+I YV++ VEEGGI+VDQ
Sbjct: 61  HLLQSEDPENMPKKSE-INPKDNHISFQCESMGAVEKKLKEMEIKYVRATVEEGGIHVDQ 119

Query: 121 LFFHDPDGSMIEICNCDVLPVVPLAGDAVRIRSCTSTVNCNF--HQQQIQQEPQ 172
           LFFHDPDG MIEICNCD LPV+PLAG+    RSC S VN     H +Q+ Q  Q
Sbjct: 120 LFFHDPDGFMIEICNCDSLPVIPLAGEMA--RSC-SRVNLQMIQHNKQMHQVVQ 170

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351723359|ref|NP_001237532.1| uncharacterized protein LOC100306100 [Glycine max] gi|255627549|gb|ACU14119.1| unknown [Glycine max]

 Score =  246 bits (627), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 115/155 (74%), Positives = 133/155 (85%), Gaps = 3/155 (1%)

Query: 1   MKESVENPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGI 60
           MKESV NPL L+S+NHISL+CRSVE S+DFYQNVLGF+PIRRPGS DFDGAWLF YG+GI
Sbjct: 1   MKESVGNPLRLQSVNHISLICRSVEQSMDFYQNVLGFYPIRRPGSLDFDGAWLFGYGIGI 60

Query: 61  HLLKSEEPDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQ 120
           HLL++E P+ LPK  K INPKDNHISFQCE+M  VE++LKEM+IDY ++ VEEGGI VDQ
Sbjct: 61  HLLEAENPEKLPKK-KEINPKDNHISFQCESMVAVEKKLKEMEIDYARATVEEGGIQVDQ 119

Query: 121 LFFHDPDGSMIEICNCDVLPVVPLAGDAVRIRSCT 155
           LFFHDPDG MIEICNCD LPV+PL G+    RSC+
Sbjct: 120 LFFHDPDGFMIEICNCDSLPVIPLVGEVA--RSCS 152

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449436156|ref|XP_004135860.1| PREDICTED: uncharacterized protein LOC101209593 [Cucumis sativus] gi|449491017|ref|XP_004158775.1| PREDICTED: uncharacterized LOC101209593 [Cucumis sativus]

 Score =  243 bits (621), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 116/155 (74%), Positives = 135/155 (87%), Gaps = 3/155 (1%)

Query: 1   MKESVENPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGI 60
           MKES  NPL LKS+NHISL+C+SVE S+ FYQN+LGFFPIRRPGSF FDGAWLF YG+GI
Sbjct: 1   MKESEGNPLHLKSINHISLLCKSVEESIYFYQNILGFFPIRRPGSFKFDGAWLFGYGIGI 60

Query: 61  HLLKSEEPDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQ 120
           HLL+SE+P+NLPK GK INPKDNHISFQCE+M  VE++LKEM+I+YV++ VEEGGI VDQ
Sbjct: 61  HLLQSEKPENLPKKGK-INPKDNHISFQCESMGAVEKKLKEMEIEYVRAVVEEGGIQVDQ 119

Query: 121 LFFHDPDGSMIEICNCDVLPVVPLAGDAVRIRSCT 155
           LFFHDPDG MIEICNCD LPV+PL G+    RSC+
Sbjct: 120 LFFHDPDGFMIEICNCDNLPVIPLGGEVS--RSCS 152

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388506784|gb|AFK41458.1| unknown [Lotus japonicus] gi|388522799|gb|AFK49461.1| unknown [Lotus japonicus]

 Score =  242 bits (617), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 114/155 (73%), Positives = 134/155 (86%), Gaps = 3/155 (1%)

Query: 1   MKESVENPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGI 60
           MK+SV NPL LKS+NHISL+CRSVE S+ FYQ+VLGFFPIRRPGSFDFDGAWLF YG+GI
Sbjct: 1   MKDSVGNPLHLKSVNHISLICRSVEESMAFYQDVLGFFPIRRPGSFDFDGAWLFGYGIGI 60

Query: 61  HLLKSEEPDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQ 120
           HLL++E P+ LP+  K INPKDNHISFQCE+M  VE++LK+M+I YV++ VEEGGI VDQ
Sbjct: 61  HLLEAENPEKLPRK-KEINPKDNHISFQCESMGAVEKKLKDMEIAYVRATVEEGGIQVDQ 119

Query: 121 LFFHDPDGSMIEICNCDVLPVVPLAGDAVRIRSCT 155
           LFFHDPDG MIEICNCD LPV+PLAG+    RSC+
Sbjct: 120 LFFHDPDGFMIEICNCDSLPVIPLAGELA--RSCS 152

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|317106739|dbj|BAJ53235.1| JHL06P13.16 [Jatropha curcas]

 Score =  240 bits (613), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 113/155 (72%), Positives = 134/155 (86%), Gaps = 3/155 (1%)

Query: 1   MKESVENPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGI 60
           MKE+  NPL LKSLNHIS +C+SVE S+DFY+NVLGF PIRRPGSFDFDGAWL+ YG+GI
Sbjct: 1   MKETTGNPLHLKSLNHISHLCKSVEQSVDFYENVLGFVPIRRPGSFDFDGAWLYGYGIGI 60

Query: 61  HLLKSEEPDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQ 120
           HLL+SE+PDN+PK  + INPKDNHISFQCE+M  VE++LKEM I +V++ VEEGGI+VDQ
Sbjct: 61  HLLQSEDPDNMPKKTE-INPKDNHISFQCESMGAVEKKLKEMGIKHVRAMVEEGGIHVDQ 119

Query: 121 LFFHDPDGSMIEICNCDVLPVVPLAGDAVRIRSCT 155
           LFFHDPDG MIEICNCD LPV+PLAG+    RSC+
Sbjct: 120 LFFHDPDGFMIEICNCDSLPVIPLAGEVA--RSCS 152

Source: Jatropha curcas

Species: Jatropha curcas

Genus: Jatropha

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351721390|ref|NP_001235416.1| uncharacterized protein LOC100305695 [Glycine max] gi|255626337|gb|ACU13513.1| unknown [Glycine max]

 Score =  239 bits (610), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 116/168 (69%), Positives = 138/168 (82%), Gaps = 5/168 (2%)

Query: 1   MKESVENPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGI 60
           MKE+V NPL LKS+NHISL+C SV+ S++FYQN+LGFFPIRRPGSFDFDGAWLF YG+GI
Sbjct: 1   MKENVGNPLHLKSVNHISLICTSVKESINFYQNLLGFFPIRRPGSFDFDGAWLFGYGIGI 60

Query: 61  HLLKSEEPDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQ 120
           HLL++E+PDN+P+  K INPKDNHISFQCE+M  VE++L EM+I+YV + VEEGGI VDQ
Sbjct: 61  HLLQAEDPDNVPRKTK-INPKDNHISFQCESMGAVEKKLGEMEIEYVHATVEEGGIKVDQ 119

Query: 121 LFFHDPDGSMIEICNCDVLPVVPLAGDA---VRIRSCTSTVNCNFHQQ 165
           LFFHDPDG MIEICNCD LPV+PLA        +RSC S +N    QQ
Sbjct: 120 LFFHDPDGFMIEICNCDSLPVIPLAASGNNNGMVRSC-SRLNLQILQQ 166

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	194
TAIR|locus:2016254	167	GLYI7 "AT1G80160" [Arabidopsis	0.783	0.910	0.709	7.5e-57
TAIR|locus:2037728	174	GLYI4 "AT1G15380" [Arabidopsis	0.783	0.873	0.677	1.6e-54
TAIR|locus:2057522	184	GLYI8 "AT2G28420" [Arabidopsis	0.726	0.766	0.559	2.5e-42
TAIR|locus:2164600	197	AT5G57040 "AT5G57040" [Arabido	0.577	0.568	0.303	2.9e-09
TAIR|locus:2045482	135	AT2G32090 "AT2G32090" [Arabido	0.634	0.911	0.296	4.7e-09
TIGR_CMR|CPS_2825	128	CPS_2825 "glyoxylase family pr	0.623	0.945	0.296	6.8e-08
TIGR_CMR|BA_0607	128	BA_0607 "glyoxylase family pro	0.608	0.921	0.242	1.9e-05
UNIPROTKB|Q4KB97	136	PFL_3381 "Uncharacterized prot	0.551	0.786	0.280	3.3e-05
UNIPROTKB|Q8EFL3	153	SO_1958 "Glyoxylase-like domai	0.603	0.764	0.28	0.0002
TIGR_CMR|SO_1958	153	SO_1958 "conserved hypothetica	0.603	0.764	0.28	0.0002

TAIR|locus:2016254 GLYI7 "AT1G80160" [Arabidopsis thaliana (taxid:3702)]

 Score = 585 (211.0 bits), Expect = 7.5e-57, P = 7.5e-57
 Identities = 110/155 (70%), Positives = 129/155 (83%)

Query:     1 MKESVENPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGI 60
             MK+   NPL +KSLNHISL+CRSVE S+ FYQNVLGF PIRRP SFDFDGAWLF +G+GI
Sbjct:     1 MKDETGNPLHIKSLNHISLLCRSVEESISFYQNVLGFLPIRRPDSFDFDGAWLFGHGIGI 60

Query:    61 HLLKSEEPDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQ 120
             HLL+S EP+ L K  + INPKDNHISFQCE+M  VE++LKEM+I+YV++ VEEGGI VDQ
Sbjct:    61 HLLQSPEPEKLLKKTE-INPKDNHISFQCESMEAVEKKLKEMEIEYVRAVVEEGGIQVDQ 119

Query:   121 LFFHDPDGSMIEICNCDVLPVVPLAGDAVRIRSCT 155
             LFFHDPD  MIEICNCD LPV+PLAG+  R  SC+
Sbjct:   120 LFFHDPDAFMIEICNCDSLPVIPLAGEMAR--SCS 152

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=ISS

GO:0009414 "response to water deprivation" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

GO:0046482 "para-aminobenzoic acid metabolic process" evidence=RCA

TAIR|locus:2037728 GLYI4 "AT1G15380" [Arabidopsis thaliana (taxid:3702)]

 Score = 563 (203.2 bits), Expect = 1.6e-54, P = 1.6e-54
 Identities = 105/155 (67%), Positives = 126/155 (81%)

Query:     1 MKESVENPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGI 60
             MKE   NPL L SLNH+S++CRSV+ S++FYQ VLGF PIRRP S +F+GAWLF +G+GI
Sbjct:     1 MKEDAGNPLHLTSLNHVSVLCRSVDESMNFYQKVLGFIPIRRPESLNFEGAWLFGHGIGI 60

Query:    61 HLLKSEEPDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQ 120
             HLL + EP+ LPK    INPKDNHISFQCE+M +VE++L+EM IDYV++ VEEGGI VDQ
Sbjct:    61 HLLCAPEPEKLPKKTA-INPKDNHISFQCESMGVVEKKLEEMGIDYVRALVEEGGIQVDQ 119

Query:   121 LFFHDPDGSMIEICNCDVLPVVPLAGDAVRIRSCT 155
             LFFHDPDG MIEICNCD LPVVPL G+  R  SC+
Sbjct:   120 LFFHDPDGFMIEICNCDSLPVVPLVGEMAR--SCS 152

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=ISS

GO:0009744 "response to sucrose stimulus" evidence=RCA

GO:0009750 "response to fructose stimulus" evidence=RCA

TAIR|locus:2057522 GLYI8 "AT2G28420" [Arabidopsis thaliana (taxid:3702)]

 Score = 448 (162.8 bits), Expect = 2.5e-42, P = 2.5e-42
 Identities = 80/143 (55%), Positives = 110/143 (76%)

Query:    11 LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDN 70
             L +LNH+S +C+ V+ SL+FY  VLGF  I RP SFDFDGAWLFNYG+GIHL+++++ D 
Sbjct:    18 LMALNHVSRLCKDVKKSLEFYTKVLGFVEIERPASFDFDGAWLFNYGVGIHLVQAKDQDK 77

Query:    71 LPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRV-EEGGINVDQLFFHDPDGS 129
             LP    +++P DNHISFQCE+M  +E+RLKE+K+ Y+K  V +E    +DQLFF+DPDG 
Sbjct:    78 LPSDTDHLDPMDNHISFQCEDMEALEKRLKEVKVKYIKRTVGDEKDAAIDQLFFNDPDGF 137

Query:   130 MIEICNCDVLPVVPL-AGDAVRI 151
             M+EICNC+ L +VP  + DA+R+
Sbjct:   138 MVEICNCENLELVPCHSADAIRL 160

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=ISS

GO:0009845 "seed germination" evidence=RCA

GO:0016114 "terpenoid biosynthetic process" evidence=RCA

GO:0019915 "lipid storage" evidence=RCA

GO:0050826 "response to freezing" evidence=RCA

TAIR|locus:2164600 AT5G57040 "AT5G57040" [Arabidopsis thaliana (taxid:3702)]

 Score = 136 (52.9 bits), Expect = 2.9e-09, P = 2.9e-09
 Identities = 37/122 (30%), Positives = 60/122 (49%)

Query:    14 LNHISLVCRSVEASLDFYQNVLGF-FPIRRP-GSFDFDGAWLFNYGMGIHLLKSEEPDNL 71
             ++H+ L+C ++E SL+FYQN+LG      RP     + GAWL+     IHL++   PD  
Sbjct:    79 VHHVGLLCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGSEMIHLMELPNPD-- 136

Query:    72 PKAGK-NINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSM 130
             P  G+     +D H      +++ ++  L +  I Y  S+     I     F  DPD + 
Sbjct:   137 PLTGRPEHGGRDRHACIAIRDVSNLKEILDKAGIAYTMSKSGRPAI-----FTRDPDANA 191

Query:   131 IE 132
             +E
Sbjct:   192 LE 193

GO:0003824 "catalytic activity" evidence=ISS

GO:0008152 "metabolic process" evidence=ISS

GO:0009507 "chloroplast" evidence=IDA

TAIR|locus:2045482 AT2G32090 "AT2G32090" [Arabidopsis thaliana (taxid:3702)]

 Score = 134 (52.2 bits), Expect = 4.7e-09, P = 4.7e-09
 Identities = 40/135 (29%), Positives = 61/135 (45%)

Query:    11 LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYG-MGIHLLKSEEPD 69
             + SL HI+     +     FY+ V GF  I  P   D    WL   G   +H+++     
Sbjct:     1 MASLGHIARESSDITRLAQFYKEVFGFEEIESPDFGDLQVVWLNLPGAFAMHIIQRNPST 60

Query:    70 NLPK-------AGKNIN--PKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQ 120
             NLP+       A K+ +  P  +HI F   N       LKE  I+  +  + +G   V Q
Sbjct:    61 NLPEGPYSATSAVKDPSHLPMGHHICFSVPNFDSFLHSLKEKGIETFQKSLPDG--KVKQ 118

Query:   121 LFFHDPDGSMIEICN 135
             +FF DPDG+ +E+ +
Sbjct:   119 VFFFDPDGNGLEVAS 133

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0005739 "mitochondrion" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=ISS

GO:0006661 "phosphatidylinositol biosynthetic process" evidence=RCA

GO:0009741 "response to brassinosteroid stimulus" evidence=RCA

TIGR_CMR|CPS_2825 CPS_2825 "glyoxylase family protein" [Colwellia psychrerythraea 34H (taxid:167879)]

 Score = 123 (48.4 bits), Expect = 6.8e-08, P = 6.8e-08
 Identities = 37/125 (29%), Positives = 55/125 (44%)

Query:    11 LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWL-FNYGMGIHLLKSEEPD 69
             L  ++H++++C   E S DFY  +LGF  I      D D   L      G  +     PD
Sbjct:     2 LNGIHHVAIICSDYEKSKDFYTRILGFKIIAENYRADRDSFKLDLALADGTQIELFSFPD 61

Query:    70 NLPKAGKNINPKD-NHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDG 128
               PK       +   H++F  EN+  V + L  + +D    RV+E        FF DPDG
Sbjct:    62 -APKRPSFPEAQGLRHLAFNVENVEAVSQYLTNLGVDVESIRVDEY-TGKQFTFFSDPDG 119

Query:   129 SMIEI 133
               +E+
Sbjct:   120 LPLEL 124

GO:0003824 "catalytic activity" evidence=ISS

GO:0008152 "metabolic process" evidence=ISS

TIGR_CMR|BA_0607 BA_0607 "glyoxylase family protein" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 101 (40.6 bits), Expect = 1.9e-05, P = 1.9e-05
 Identities = 31/128 (24%), Positives = 60/128 (46%)

Query:    11 LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMG----IHLLKSE 66
             +  ++H++++C + E S DFY  +LGF  I      + D ++  +  +G    I L    
Sbjct:     3 ISRVHHVAIICSNYEVSKDFYTRILGFKAINEVYRKERD-SYKLDLCVGKEYQIELFSFP 61

Query:    67 EPDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQ-LFFHD 125
              P   P   +    +  H++F   N+    + L +  ++    R++E  I   + +FF D
Sbjct:    62 NPPKRPSFPEAAGLR--HLAFAVTNIEEAVQDLSQCGVETEAIRIDE--ITGKKFVFFQD 117

Query:   126 PDGSMIEI 133
             PDG  +E+
Sbjct:   118 PDGLPLEL 125

GO:0003824 "catalytic activity" evidence=ISS

GO:0008152 "metabolic process" evidence=ISS

UNIPROTKB|Q4KB97 PFL_3381 "Uncharacterized protein" [Pseudomonas protegens Pf-5 (taxid:220664)]

 Score = 99 (39.9 bits), Expect = 3.3e-05, P = 3.3e-05
 Identities = 34/121 (28%), Positives = 60/121 (49%)

Query:    15 NHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMG-IHLLKSEEPDNLPK 73
             +H++  C   EA    + ++LG    RRP  F F G WL+      +H++   E  + P+
Sbjct:     6 DHLAFNCDEGEALQQAFADLLGLQTGRRP-PFPFPGRWLYQGDAALVHVI---EQAHCPE 61

Query:    74 AGKNINPKDNHISFQCENMA-IVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIE 132
                   P  +HI+F  +  A  V RR++   +++  ++V E GI   Q+F   P G ++E
Sbjct:    62 ------PHLSHIAFSTQEAAEAVLRRVQASGLEHQVAQVPEDGIW--QIFVRLPGGLVLE 113

Query:   133 I 133
             +
Sbjct:   114 L 114

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q8EFL3 SO_1958 "Glyoxylase-like domain protein" [Shewanella oneidensis MR-1 (taxid:211586)]

 Score = 102 (41.0 bits), Expect = 0.00020, P = 0.00020
 Identities = 35/125 (28%), Positives = 61/125 (48%)

Query:    14 LNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGI-HLLK--SEEPDN 70
             L+H ++    +  ++ FYQ +LG     RP  F F G WL+     I HL++  S   D 
Sbjct:     6 LDHFTIRTPILAETVQFYQVILGLTQGWRP-RFGFPGHWLYAEEKPILHLVEVGSRALDA 64

Query:    71 LPKAGKNI--NPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDG 128
                    +  + + +H+SF+  N+A +++ L   +  + +  V E  I   QLF  DP+G
Sbjct:    65 YLGESNALFGSGRVDHLSFRGTNLAQMQQHLCRQQCQFRERIVPE--IGEHQLFIEDPNG 122

Query:   129 SMIEI 133
               +E+
Sbjct:   123 ITVEM 127

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|SO_1958 SO_1958 "conserved hypothetical protein" [Shewanella oneidensis MR-1 (taxid:211586)]

 Score = 102 (41.0 bits), Expect = 0.00020, P = 0.00020
 Identities = 35/125 (28%), Positives = 61/125 (48%)

Query:    14 LNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGI-HLLK--SEEPDN 70
             L+H ++    +  ++ FYQ +LG     RP  F F G WL+     I HL++  S   D 
Sbjct:     6 LDHFTIRTPILAETVQFYQVILGLTQGWRP-RFGFPGHWLYAEEKPILHLVEVGSRALDA 64

Query:    71 LPKAGKNI--NPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDG 128
                    +  + + +H+SF+  N+A +++ L   +  + +  V E  I   QLF  DP+G
Sbjct:    65 YLGESNALFGSGRVDHLSFRGTNLAQMQQHLCRQQCQFRERIVPE--IGEHQLFIEDPNG 122

Query:   129 SMIEI 133
               +E+
Sbjct:   123 ITVEM 127

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.5.1	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	194
cd07245	114	cd07245, Glo_EDI_BRP_like_9, This conserved domain	2e-38
cd06587	110	cd06587, Glo_EDI_BRP_like, This domain superfamily	2e-17
COG0346	138	COG0346, GloA, Lactoylglutathione lyase and relate	1e-14
pfam12681	109	pfam12681, Glyoxalase_2, Glyoxalase-like domain	6e-13
pfam00903	120	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resist	1e-12
cd08346	126	cd08346, PcpA_N_like, N-terminal domain of Sphingo	4e-11
cd07253	125	cd07253, Glo_EDI_BRP_like_2, This conserved domain	5e-09
cd08363	131	cd08363, FosB, FosB, a fosfomycin resistance prote	2e-08
cd07242	128	cd07242, Glo_EDI_BRP_like_6, This conserved domain	2e-08
cd08348	134	cd08348, BphC2-C3-RGP6_C_like, The single-domain 2	3e-08
PRK04101	139	PRK04101, PRK04101, fosfomycin resistance protein	3e-07
cd07244	121	cd07244, FosA, FosA, a Fosfomycin resistance prote	3e-07
cd08352	125	cd08352, Glo_EDI_BRP_like_1, This conserved domain	7e-07
cd08354	122	cd08354, Glo_EDI_BRP_like_13, This conserved domai	9e-07
cd08345	113	cd08345, Fosfomycin_RP, Fosfomycin resistant prote	1e-06
cd07249	128	cd07249, MMCE, Methylmalonyl-CoA epimerase (MMCE)	1e-06
cd07233	121	cd07233, Glyoxalase_I, Glyoxalase I catalyzes the	3e-06
cd08349	112	cd08349, BLMA_like, Bleomycin binding protein (BLM	1e-05
pfam13669	110	pfam13669, Glyoxalase_4, Glyoxalase/Bleomycin resi	2e-05
cd09013	121	cd09013, BphC-JF8_N_like, N-terminal, non-catalyti	1e-04
cd07255	125	cd07255, Glo_EDI_BRP_like_12, This conserved domai	3e-04
cd09011	120	cd09011, Glo_EDI_BRP_like_23, This conserved domai	0.001
cd07262	123	cd07262, Glo_EDI_BRP_like_19, This conserved domai	0.001
PLN03042	185	PLN03042, PLN03042, Lactoylglutathione lyase; Prov	0.001

>gnl|CDD|176669 cd07245, Glo_EDI_BRP_like_9, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score =  127 bits (322), Expect = 2e-38
 Identities = 46/121 (38%), Positives = 67/121 (55%), Gaps = 8/121 (6%)

Query: 14  LNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMG-IHLLKSEEPDNLP 72
           L+H++L    +EAS  FY +VLG     RP  F F GAWL+      +HL++ + PD LP
Sbjct: 1   LDHVALRVPDLEASRAFYTDVLGLEEGPRP-PFLFPGAWLYAGDGPQLHLIEEDPPDALP 59

Query: 73  KAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIE 132
                   +D+HI+F+ +++     RLK   + Y +S V   G  V QLF  DPDG+ IE
Sbjct: 60  ----EGPGRDDHIAFRVDDLDAFRARLKAAGVPYTESDVPGDG--VRQLFVRDPDGNRIE 113

Query: 133 I 133
           +
Sbjct: 114 L 114

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases. Length = 114

>gnl|CDD|211348 cd06587, Glo_EDI_BRP_like, This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

 Score = 73.6 bits (181), Expect = 2e-17
 Identities = 33/118 (27%), Positives = 58/118 (49%), Gaps = 8/118 (6%)

Query: 16  HISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNLPKAG 75
           H+ L    +EA++ FY++VLGF  + R G    + A+L   G  + L + +EP      G
Sbjct: 1   HVGLTVPDLEAAVAFYEDVLGFEVLERDGGGA-EFAFLRLGGTRLELFEGDEPAPPSGGG 59

Query: 76  KNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEI 133
                   H++F+ +++     RLK   ++ +    EE        +F DPDG++IE+
Sbjct: 60  G------VHLAFEVDDVDAAVERLKAAGVEILGGPREEPWGG-RVAYFRDPDGNLIEL 110

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. Glyoxylase I catalyzes the glutathione-dependent inactivation of toxic methylglyoxal, requiring zinc or nickel ions for activity. The antibiotic resistance proteins in this family use a variety of mechanisms to block the function of antibiotics. Bleomycin resistance protein (BLMA) sequesters bleomycin's activity by directly binding to it. Whereas, three types of fosfomycin resistance proteins employ different mechanisms to render fosfomycin inactive by modifying the fosfomycin molecule. Although the proteins in this superfamily are functionally distinct, their structures are similar. The difference among the three dimensional structures of the three types of proteins in this superfamily is interesting from an evolutionary perspective. Both glyoxalase I and BLMA show domain swapping between subunits. However, there is no domain swapping for type 1 extradiol dioxygenases. Length = 110

>gnl|CDD|223423 COG0346, GloA, Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]

 Score = 67.5 bits (164), Expect = 1e-14
 Identities = 34/135 (25%), Positives = 58/135 (42%), Gaps = 14/135 (10%)

Query: 14  LNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDG---AWLFNYGMGIHLLKSEEPDN 70
           ++H++L    +EAS+DFY +VLG   ++   +   DG     LF  G G           
Sbjct: 3   IHHVTLAVPDLEASIDFYTDVLGLRLVKDTVNEADDGGGYHLLFLDGDGGPGELLAFFGF 62

Query: 71  LPKAGKNINPKD-----------NHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVD 119
             +AG                   H++F+ ++ A  +  L  +  D V+  + E G    
Sbjct: 63  EGRAGTGFVGDVALGVPGGDLGLGHLAFEVDDEAFGDAALAFLDPDGVRIELGEPGRGGV 122

Query: 120 QLFFHDPDGSMIEIC 134
            ++F DPDG +IE+ 
Sbjct: 123 HVYFRDPDGILIELA 137

Length = 138

>gnl|CDD|221708 pfam12681, Glyoxalase_2, Glyoxalase-like domain

 Score = 62.1 bits (151), Expect = 6e-13
 Identities = 28/117 (23%), Positives = 50/117 (42%), Gaps = 9/117 (7%)

Query: 19  LVCRSVEASLDFYQNVLGFFPIRRPGSF-DFDGAWLFNYGMGIHLLKSEEPDNLPKAGKN 77
           L    +EA+  FY+ +LGF      G + +F    +   G  I L+   EPD     G  
Sbjct: 1   LPVSDLEAARAFYEELLGFEVEEEDGEYAEFRLGLVLALGGFIELIGLPEPDAPGGGG-- 58

Query: 78  INPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEIC 134
                 H+ F+ +++  +  RLK      ++   +       + +  DPDG++IE+ 
Sbjct: 59  -----VHLYFEVDDLDALVARLKAAGGTILEPPEDTPW-GGREFYVRDPDGNLIELI 109

This domain is related to the Glyoxalase domain pfam00903. Length = 109

>gnl|CDD|216182 pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily

 Score = 61.7 bits (150), Expect = 1e-12
 Identities = 38/127 (29%), Positives = 60/127 (47%), Gaps = 15/127 (11%)

Query: 14  LNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFD--GAWLFNYGMGIHLLKSEEPDNL 71
           ++H++L    +E SLDFY +VLGF  +      +     A+    G  + LL +E P   
Sbjct: 2   IDHVALRVGDLEKSLDFYTDVLGFKLVEEVDDGEGPLRSAFFTAGGRVLELLLNETPP-- 59

Query: 72  PKAGKNINPKDNHISFQCENMAIVER---RLKE--MKIDYVKSRVEEGGINVDQLFFHDP 126
           P A        +HI+F   ++  V+    RLK   ++I     R   GG      +F DP
Sbjct: 60  PAAAG---FGGHHIAFIAFSVDDVDAAYDRLKAAGVEIVREPGRHGWGGR---YSYFRDP 113

Query: 127 DGSMIEI 133
           DG++IE+
Sbjct: 114 DGNLIEL 120

Length = 120

>gnl|CDD|211356 cd08346, PcpA_N_like, N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

 Score = 57.6 bits (140), Expect = 4e-11
 Identities = 36/128 (28%), Positives = 63/128 (49%), Gaps = 10/128 (7%)

Query: 14  LNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGI----HLLKSEEPD 69
           L+H++LV R  + ++DFY +VLG   +++  + D  G +   +G G+     LL   E  
Sbjct: 2   LHHVTLVTRDAQETVDFYTDVLGLRLVKKTVNQDDPGTYHLFFGDGLGSPGTLLTFFEWP 61

Query: 70  NLPKAGKNINPKDNHISFQCENMAIVE---RRLKEMKIDYVKSRVEEGGINVDQLFFHDP 126
           +    G+    + +HI+F   + A +E    RL+   +  V   V+  G     L+F DP
Sbjct: 62  DAGPKGRRGPGQIHHIAFSVPSEASLEAWRERLRAAGVP-VSGVVDRFGERS--LYFEDP 118

Query: 127 DGSMIEIC 134
           DG  +E+ 
Sbjct: 119 DGIRLELT 126

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. Length = 126

>gnl|CDD|176676 cd07253, Glo_EDI_BRP_like_2, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 51.8 bits (125), Expect = 5e-09
 Identities = 33/132 (25%), Positives = 55/132 (41%), Gaps = 15/132 (11%)

Query: 11  LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFD----GAWLFNYGMGIHLLKSE 66
           +K ++H+ L    +EA+LDFY  VLG   +R            G+   N    +H +  E
Sbjct: 1   IKRIDHVVLTVADIEATLDFYTRVLGMEVVRFGEEVGRKALRFGSQKIN----LHPVGGE 56

Query: 67  EPDNLPKAGKNINPKDNHISFQCE-NMAIVERRLKEMKIDYVKSRVEEGGI--NVDQLFF 123
                P AG      D  +    E  +  +   L+   +   +  V   G    +  ++F
Sbjct: 57  F---EPAAGSPGPGSD-DLCLITEPPIDELVAHLEAHGVPIEEGPVPRTGARGPITSVYF 112

Query: 124 HDPDGSMIEICN 135
            DPDG++IE+ N
Sbjct: 113 RDPDGNLIELSN 124

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping. Length = 125

>gnl|CDD|176711 cd08363, FosB, FosB, a fosfomycin resistance protein, catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin

 Score = 50.6 bits (121), Expect = 2e-08
 Identities = 32/128 (25%), Positives = 56/128 (43%), Gaps = 24/128 (18%)

Query: 14  LNHISLVCRSVEASLDFYQNVLGFFPI---RRPGSFDFDGAWLFNYGMGIHLLKSEEPDN 70
           +NH++    +++ S+ FY++V     +    +   F   G W         L  +EEPD 
Sbjct: 1   INHMTFSVSNLDKSISFYKHVFMEKLLVLGEKTAYFTIGGTW---------LALNEEPD- 50

Query: 71  LPKAGKNINPKDNHISFQCENMAIVE--RRLKEMKIDYVKSR---VEEGGINVDQLFFHD 125
           +P+    I     HI+F  E+        RLKE  ++ +  R   V +       ++F D
Sbjct: 51  IPR--NEIRQSYTHIAFTIEDSEFDAFYTRLKEAGVNILPGRKRDVRDR----KSIYFTD 104

Query: 126 PDGSMIEI 133
           PDG  +E+
Sbjct: 105 PDGHKLEV 112

This subfamily family contains FosB, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosB catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin, (1R,2S)-epoxypropylphosphonic acid, rendering it inactive. FosB is evolutionarily related to glyoxalase I and type I extradiol dioxygenases. Length = 131

>gnl|CDD|176666 cd07242, Glo_EDI_BRP_like_6, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 50.4 bits (121), Expect = 2e-08
 Identities = 31/130 (23%), Positives = 51/130 (39%), Gaps = 12/130 (9%)

Query: 13  SLNHISLVCRSVEASLDFYQNVL---GFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPD 69
            ++H+ L  R +E S  FY  +L   GF  ++         A      + +     E   
Sbjct: 1   GIHHVELTVRDLERSRAFYDWLLGLLGFEEVKEWEDGRSWRAGDGGTYLVLQQADGESAG 60

Query: 70  NLPKAGKNINPKDNHISFQCENMAIVER---RLKE--MKIDYVKSRVEEGGINVDQLFFH 124
              +     NP  +H++F+  +   V+    RL +   +I Y       GG     LFF 
Sbjct: 61  RHDRR----NPGLHHLAFRAPSREAVDELYARLAKRGAEILYAPREPYAGGPGYYALFFE 116

Query: 125 DPDGSMIEIC 134
           DPDG  +E+ 
Sbjct: 117 DPDGIRLELV 126

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping. Length = 128

>gnl|CDD|176696 cd08348, BphC2-C3-RGP6_C_like, The single-domain 2,3-dihydroxybiphenyl 1,2-dioxygenases (BphC, EC 1

 Score = 49.9 bits (120), Expect = 3e-08
 Identities = 35/142 (24%), Positives = 57/142 (40%), Gaps = 23/142 (16%)

Query: 13  SLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLF-NYGMGIH-----LLKSE 66
            L+H+ L  R +EA + FY++VLGF    R       G  +F +     H     +    
Sbjct: 1   RLSHVVLYVRDLEAMVRFYRDVLGFTVTDR----GPLGGLVFLSRDPDEHHQIALITGRP 56

Query: 67  EPDNLPKAGKNINPKDNHISFQCENM---AIVERRLKEMKIDYVKSRVEEGGINVDQLFF 123
                  AG       NHI+F+ +++     +  RL+   I  V         ++   +F
Sbjct: 57  AAPPPGPAGL------NHIAFEVDSLDDLRDLYERLRAAGITPVWPVDHGNAWSI---YF 107

Query: 124 HDPDGSMIEICNCDVLPVVPLA 145
            DPDG+ +E+   D    V  A
Sbjct: 108 RDPDGNRLELF-VDTPWYVAQA 128

13.11.39) from Rhodococcus globerulus P6, BphC2-RGP6 and BphC3-RGP6, and similar proteins. This subfamily contains Rhodococcus globerulus P6 BphC2-RGP6 and BphC3-RGP6, and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, yielding 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid. This is the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Most type I extradiol dioxygenases are activated by Fe(II). Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC2-RGP6 and BphC3-RGP6 are one-domain dioxygenases, which form hexamers. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, its two domains do not belong to this subfamily. Length = 134

>gnl|CDD|179740 PRK04101, PRK04101, fosfomycin resistance protein FosB; Provisional

 Score = 47.6 bits (114), Expect = 3e-07
 Identities = 38/131 (29%), Positives = 61/131 (46%), Gaps = 26/131 (19%)

Query: 11  LKSLNHISLVCRSVEASLDFYQNVLGFFPI---RRPGSFDFDGAWL-FNYGMGIHLLKSE 66
           LK +NHI     ++E S++FY+ VLG   +   R+   FD +G W+  N          E
Sbjct: 2   LKGINHICFSVSNLEKSIEFYEKVLGAKLLVKGRKTAYFDLNGLWIALN----------E 51

Query: 67  EPDNLPKAGKNINPKDNHISF--QCENMAIVERRLKEMKIDYVKSR---VEEGGINVDQL 121
           E D +P+    I+    HI+F  + E+     +RLKE  ++ +  R     +       +
Sbjct: 52  EKD-IPR--NEIHQSYTHIAFSIEEEDFDHWYQRLKENDVNILPGRERDERDK----KSI 104

Query: 122 FFHDPDGSMIE 132
           +F DPDG   E
Sbjct: 105 YFTDPDGHKFE 115

Length = 139

>gnl|CDD|176668 cd07244, FosA, FosA, a Fosfomycin resistance protein, catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive

 Score = 47.0 bits (112), Expect = 3e-07
 Identities = 32/124 (25%), Positives = 53/124 (42%), Gaps = 20/124 (16%)

Query: 13  SLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNLP 72
            +NHI+L    +E S+ FY ++LGF    R       GA+L    + + L  S + +  P
Sbjct: 1   GINHITLAVSDLERSVAFYVDLLGFKLHVRWDK----GAYLEAGDLWLCL--SVDANVGP 54

Query: 73  KAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINV---DQLFFHDPDGS 129
                      H +F     ++ E     +K    ++ V+E   N    D  +F DPDG 
Sbjct: 55  A------KDYTHYAF-----SVSEEDFASLKEKLRQAGVKEWKENTSEGDSFYFLDPDGH 103

Query: 130 MIEI 133
            +E+
Sbjct: 104 KLEL 107

This subfamily family contains FosA, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosA, catalyzes the addition of glutathione to the antibiotic fosfomycin, (1R,2S)-epoxypropylphosphonic acid, making it inactive. FosA is a Mn(II) dependent enzyme. It is evolutionarily related to glyoxalase I and type I extradiol dioxygenases. Length = 121

>gnl|CDD|211358 cd08352, Glo_EDI_BRP_like_1, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 46.2 bits (110), Expect = 7e-07
 Identities = 40/138 (28%), Positives = 58/138 (42%), Gaps = 28/138 (20%)

Query: 11  LKSLNHISLVCRSVEASLDFYQNVLGFFPIR---RP--GSFDFDGAWLFNYGMGIHLLKS 65
           LK ++H++++C     S +FY  VLG   IR   RP   S+  D A   N    I L   
Sbjct: 1   LKGIHHVAIICSDYARSKEFYVEVLGLTLIRETYRPERKSYKLDLA--LNGEYQIELFSF 58

Query: 66  EEPDNLPKAGKNINPKD---NHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQL- 121
             P   P       P+     H++F  E++      LK   +      VE   I VD+  
Sbjct: 59  PNPPPRPS-----YPEACGLRHLAFAVEDIEAAVAELKAHGV-----EVEP--IRVDEFT 106

Query: 122 -----FFHDPDGSMIEIC 134
                FF+DPDG  +E+ 
Sbjct: 107 GKRFTFFYDPDGLPLELY 124

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping. Length = 125

>gnl|CDD|176702 cd08354, Glo_EDI_BRP_like_13, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 45.7 bits (109), Expect = 9e-07
 Identities = 31/123 (25%), Positives = 53/123 (43%), Gaps = 19/123 (15%)

Query: 22  RSVEASLDFYQNVLGFFPIRR-PGSFDFDGAWLFNYGMGIHLLKSEEPDNLPKAGKNINP 80
             +EA+  FY++VLG   + +      F   W+   GM + L    +P      G  I P
Sbjct: 9   DDLEAAEAFYEDVLGLELMLKEDRRLAF--FWVGGRGM-LLLF---DPGATSTPGGEIPP 62

Query: 81  KDN----HISFQCENMAIV--ERRLKEMKIDYVKSRVE--EGGINVDQLFFHDPDGSMIE 132
                  H +F      +   E  L+   +  ++S V+   GG +   L+F DPDG+++E
Sbjct: 63  HGGSGPGHFAFAIPAEELAEWEAHLEAKGVA-IESEVQWPRGGRS---LYFRDPDGNLLE 118

Query: 133 ICN 135
           +  
Sbjct: 119 LAT 121

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 122

>gnl|CDD|176693 cd08345, Fosfomycin_RP, Fosfomycin resistant protein; inhibits the biological function of fosfomycin

 Score = 45.3 bits (107), Expect = 1e-06
 Identities = 32/120 (26%), Positives = 53/120 (44%), Gaps = 14/120 (11%)

Query: 16  HISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNLPKAG 75
           HI+L+ + +  S+ FY+++LG   I          A+    G+ I L   EE   L    
Sbjct: 1   HITLIVKDLNKSIAFYRDILGAELIYSSSK----EAYFELAGLWICL--MEEDS-LQGPE 53

Query: 76  KNINPKDNHISF--QCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEI 133
           +       HI+F  Q E       RLK + ++    R    G     ++F+DPDG ++E+
Sbjct: 54  RTY----THIAFQIQSEEFDEYTERLKALGVEMKPERPRVQG-EGRSIYFYDPDGHLLEL 108

This family contains three types of fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. The three types of fosfomycin resistance proteins, employ different mechanisms to render fosfomycin [(1R,2S)-epoxypropylphosphonic acid] inactive. FosB catalyzes the addition of L-cysteine to the epoxide ring of fosfomycin. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1. FosA catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive. Catalytic activities of both FosX and FosA are Mn(II)-dependent, but FosB is activated by Mg(II). Fosfomycin resistant proteins are evolutionarily related to glyoxalase I and type I extradiol dioxygenases. Length = 113

>gnl|CDD|211350 cd07249, MMCE, Methylmalonyl-CoA epimerase (MMCE)

 Score = 45.2 bits (108), Expect = 1e-06
 Identities = 32/131 (24%), Positives = 58/131 (44%), Gaps = 14/131 (10%)

Query: 14  LNHISLVCRSVEASLDFYQNVLGF---FPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDN 70
           ++HI +    +EA+L FY++VLG         P       A+L    + I L++  + D+
Sbjct: 1   IDHIGIAVPDLEAALKFYRDVLGVGPWEREEVPSEQGVRLAFLGLGNVQIELIEPLDDDS 60

Query: 71  -----LPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHD 125
                L K G+ +    +HI+F+ +++     RLK   +  ++     G       F H 
Sbjct: 61  PIAKFLEKRGEGL----HHIAFEVDDIDAALARLKAQGVRLLQEGPRIGAGGKRVAFLHP 116

Query: 126 PD--GSMIEIC 134
            D  G +IE+ 
Sbjct: 117 KDTGGVLIELV 127

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases. Length = 128

>gnl|CDD|176659 cd07233, Glyoxalase_I, Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

 Score = 44.1 bits (105), Expect = 3e-06
 Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 26/133 (19%)

Query: 14  LNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGI------HLLK--- 64
             H  L  + +E SLDFY +VLG   +RR    DF         +G        +L+   
Sbjct: 1   FLHTMLRVKDLEKSLDFYTDVLGMKLLRR---KDFPEGKFTLVFLGYPDEDSEGVLELTY 57

Query: 65  ---SEEPDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQL 121
              +EEP +             H++F  +++     RL+EM ++  K     G   +  +
Sbjct: 58  NWGTEEPYDNGNG-------FGHLAFAVDDVYAACERLEEMGVEVTK---PPGDGGMKGI 107

Query: 122 FF-HDPDGSMIEI 133
            F  DPDG  IE+
Sbjct: 108 AFIKDPDGYWIEL 120

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic glyoxalase I uses nickel. However, eukaryotic Trypanosomatid parasites also use nickel as a cofactor, which could possibly be explained by acquiring their GLOI gene by horizontal gene transfer. Human glyoxalase I is a two-domain enzyme and it has the structure of a domain-swapped dimer with two active sites located at the dimer interface. In yeast, in various plants, insects and Plasmodia, glyoxalase I is four-domain, possibly the result of a further gene duplication and an additional gene fusing event. Length = 121

>gnl|CDD|211357 cd08349, BLMA_like, Bleomycin binding protein (BLMA) and similar proteins; BLMA confers bleomycin (Bm) resistance by directly binding to Bm

 Score = 42.2 bits (100), Expect = 1e-05
 Identities = 25/116 (21%), Positives = 48/116 (41%), Gaps = 14/116 (12%)

Query: 19  LVCRSVEASLDFYQNVLGF---FPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNLPKAG 75
           L    +E SL FY++VLGF   F       +    A +   G  +HL + +  + +P  G
Sbjct: 4   LPVSDIEKSLAFYRDVLGFEVDF-EHPEPLY----AQVSRDGAQLHLSEHDGDEWVPL-G 57

Query: 76  KNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMI 131
           +  N     +  + +++  +   LK      +    E+      +    DPDG+++
Sbjct: 58  RGGN-----VYIEVDDVDALYAELKAKGAKLIVYPPEDQPWGQREFAVQDPDGNLL 108

BLMA also called Bleomycin resistance protein, confers Bm resistance by directly binding to Bm. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMA is produced by actinomycetes to protect themselves against their own lethal compound. BLMA has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMAs are dimers and each dimer binds to two Bm molecules at the Bm-binding pockets formed at the dimer interface; two Bm molecules are bound per dimer. BLMA belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. As for the larger superfamily, this family contains members with or without domain swapping. Length = 112

>gnl|CDD|222305 pfam13669, Glyoxalase_4, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily

 Score = 41.9 bits (99), Expect = 2e-05
 Identities = 20/112 (17%), Positives = 43/112 (38%), Gaps = 8/112 (7%)

Query: 16  HISLVCRSVEASLDFYQNVLGFFPIR--RPGSFDFDGAWLFNYGMG---IHLLKSEEPDN 70
           HI +V   ++A+  F+ ++LG  P    R    + D A+          + L++  + ++
Sbjct: 2   HIGIVVPDLDAAAAFWVDLLGLGPWGDYRDEPQNVDLAFARLGDGPAVEVELIQPLDGES 61

Query: 71  LPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLF 122
               G    P  +HI++  +++     RL+   +         G       F
Sbjct: 62  FLDKGG---PGLHHIAYWVDDLDAAVARLEAQGVRVAPKGPRAGAAGRRVAF 110

Length = 110

>gnl|CDD|176715 cd09013, BphC-JF8_N_like, N-terminal, non-catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

 Score = 40.0 bits (94), Expect = 1e-04
 Identities = 33/122 (27%), Positives = 53/122 (43%), Gaps = 15/122 (12%)

Query: 14  LNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYG-MGIHLLKSEEPDNLP 72
           L H+ L+    E SL F+ +VLG     R G       +L  +G    H LK  E    P
Sbjct: 7   LAHVELLTPKPEESLWFFTDVLGLEETGREG----QSVYLRAWGDYEHHSLKLTES---P 59

Query: 73  KAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLF-FHDPDGSMI 131
           +AG        HI+++  +   +ERR+  ++   +     EG     + + F  PDG  +
Sbjct: 60  EAGL------GHIAWRASSPEALERRVAALEASGLGIGWIEGDPGHGKAYRFRSPDGHPM 113

Query: 132 EI 133
           E+
Sbjct: 114 EL 115

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C. The enzymes in this family have an internal duplication. This family represents the N-terminal repeat. Length = 121

>gnl|CDD|211352 cd07255, Glo_EDI_BRP_like_12, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 38.7 bits (91), Expect = 3e-04
 Identities = 36/135 (26%), Positives = 50/135 (37%), Gaps = 34/135 (25%)

Query: 13  SLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNLP 72
            +  ++L    +E SL FYQ+VLG   + R  S    G      G    LL  EE  + P
Sbjct: 2   RIGAVTLRVADLERSLAFYQDVLGLEVLERTDSTAVLGT-----GGKRPLLVLEEDPDAP 56

Query: 73  KAGKNI-----------NPKDNHISFQCENMAIVERRLKEMKIDYVKSR---VEEGGINV 118
            A               +  D         +A   RRL E+ I    +    V E     
Sbjct: 57  PAPPGTTGLYHFAILLPSRAD---------LARALRRLIELGIPLEGASDHLVSEA---- 103

Query: 119 DQLFFHDPDGSMIEI 133
             L+  DP+G+ IEI
Sbjct: 104 --LYLSDPEGNGIEI 116

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 125

>gnl|CDD|176713 cd09011, Glo_EDI_BRP_like_23, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 36.9 bits (86), Expect = 0.001
 Identities = 33/119 (27%), Positives = 50/119 (42%), Gaps = 14/119 (11%)

Query: 19  LVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNLPKAGKNI 78
           LV + +E S  FY+ VLG   +      DF     F  G  +    S        +  +I
Sbjct: 8   LVVKDIEKSKKFYEKVLGLKVV-----MDFGENVTFEGGFALQEGYSWLEG---ISKADI 59

Query: 79  NPKDNH--ISFQCENMAIVERRLKEMK-IDYVKSRVE-EGGINVDQLFFHDPDGSMIEI 133
             K N+  + F+ E+      +LK    I+YV    E   G  V  + F+DPD  +IE+
Sbjct: 60  IEKSNNFELYFEEEDFDAFLDKLKRYDNIEYVHPIKEHPWGQRV--VRFYDPDKHIIEV 116

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 120

>gnl|CDD|176683 cd07262, Glo_EDI_BRP_like_19, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 36.7 bits (86), Expect = 0.001
 Identities = 20/89 (22%), Positives = 34/89 (38%), Gaps = 14/89 (15%)

Query: 14 LNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPD---N 70
          ++H++L    +E +  FY  VL    I+R    +     +  YG G        PD    
Sbjct: 1  IDHVTLGVNDLERARAFYDAVLAPLGIKR--VMEDGPGAVG-YGKG-----GGGPDFWVT 52

Query: 71 LPKAGKNINPKDN--HISFQCENMAIVER 97
           P  G+      N  H++F   +   V+ 
Sbjct: 53 KPFDGEPATA-GNGTHVAFAAPSREAVDA 80

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 123

>gnl|CDD|215548 PLN03042, PLN03042, Lactoylglutathione lyase; Provisional

 Score = 37.5 bits (87), Expect = 0.001
 Identities = 33/141 (23%), Positives = 54/141 (38%), Gaps = 34/141 (24%)

Query: 26  ASLDFYQNVLGFFPIRRPGSFDFDG------------------------AWLFNYGMGIH 61
           ASLDFY  VLG   ++R    DF                           W F     I 
Sbjct: 40  ASLDFYSRVLGMSLLKR---LDFPEMKFSLYFLGYEDSETAPTDPPERTVWTFGRKATIE 96

Query: 62  LLKS----EEPDNLPKAGKNINPKD-NHISFQCENMAIVERRLKEMKIDYVKSRVEEGGI 116
           L  +     +P+       N +P+   HI    +++     R +++ +++VK + ++G +
Sbjct: 97  LTHNWGTESDPEFKGYHNGNSDPRGFGHIGITVDDVYKACERFEKLGVEFVK-KPDDGKM 155

Query: 117 NVDQLFFHDPDGSMIEICNCD 137
                F  DPDG  IEI +  
Sbjct: 156 K-GLAFIKDPDGYWIEIFDLK 175

Length = 185

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	194
PRK11478	129	putative lyase; Provisional	99.86
COG2514	265	Predicted ring-cleavage extradiol dioxygenase [Gen	99.85
cd08353	142	Glo_EDI_BRP_like_7 This conserved domain belongs t	99.83
cd07243	143	2_3_CTD_C C-terminal domain of catechol 2,3-dioxyg	99.82
cd07253	125	Glo_EDI_BRP_like_2 This conserved domain belongs t	99.81
cd08342	136	HPPD_N_like N-terminal domain of 4-hydroxyphenylpy	99.81
cd08352	125	Glo_EDI_BRP_like_1 This conserved domain belongs t	99.8
TIGR00068	150	glyox_I lactoylglutathione lyase. Glyoxylase I is	99.8
cd08364	131	FosX FosX, a fosfomycin resistance protein, cataly	99.8
TIGR03645	162	glyox_marine lactoylglutathione lyase family prote	99.8
PLN03042	185	Lactoylglutathione lyase; Provisional	99.8
cd07255	125	Glo_EDI_BRP_like_12 This conserved domain belongs	99.79
cd08347	157	PcpA_C_like C-terminal domain of Sphingobium chlor	99.79
PRK04101	139	fosfomycin resistance protein FosB; Provisional	99.79
PLN02367	233	lactoylglutathione lyase	99.79
cd07241	125	Glo_EDI_BRP_like_3 This conserved domain belongs t	99.79
cd09013	121	BphC-JF8_N_like N-terminal, non-catalytic, domain	99.79
cd07265	122	2_3_CTD_N N-terminal domain of catechol 2,3-dioxyg	99.79
cd09011	120	Glo_EDI_BRP_like_23 This conserved domain belongs	99.78
cd07245	114	Glo_EDI_BRP_like_9 This conserved domain belongs t	99.78
cd08361	124	PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cuma	99.77
cd07252	120	BphC1-RGP6_N_like N-terminal domain of 2,3-dihydro	99.77
cd07267	113	THT_Oxygenase_N N-terminal domain of 2,4,5-trihydr	99.77
cd08362	120	BphC5-RrK37_N_like N-terminal, non-catalytic, doma	99.77
cd07233	121	Glyoxalase_I Glyoxalase I catalyzes the isomerizat	99.77
cd08363	131	FosB FosB, a fosfomycin resistance protein, cataly	99.76
TIGR03081	128	metmalonyl_epim methylmalonyl-CoA epimerase. Membe	99.76
cd07247	114	SgaA_N_like N-terminal domain of Streptomyces gris	99.76
cd08360	134	MhqB_like_C C-terminal domain of Burkholderia sp.	99.76
cd07240	117	ED_TypeI_classII_N N-terminal domain of type I, cl	99.76
cd07266	121	HPCD_N_class_II N-terminal domain of 3,4-dihydroxy	99.75
cd07242	128	Glo_EDI_BRP_like_6 This conserved domain belongs t	99.75
cd07263	119	Glo_EDI_BRP_like_16 This conserved domain belongs	99.75
PLN02300	286	lactoylglutathione lyase	99.75
cd09014	166	BphC-JF8_C_like C-terminal, catalytic, domain of B	99.75
cd07257	153	THT_oxygenase_C The C-terminal domain of 2,4,5-Tri	99.74
cd08351	123	ChaP_like ChaP, an enzyme involved in the biosynth	99.74
cd08345	113	Fosfomycin_RP Fosfomycin resistant protein; inhibi	99.74
PRK06724	128	hypothetical protein; Provisional	99.74
cd08346	126	PcpA_N_like N-terminal domain of Sphingobium chlor	99.73
cd07249	128	MMCE Methylmalonyl-CoA epimerase (MMCE). MMCE, als	99.73
cd07239	144	BphC5-RK37_C_like C-terminal, catalytic, domain of	99.73
cd07237	154	BphC1-RGP6_C_like C-terminal domain of 2,3-dihydro	99.73
cd08359	119	Glo_EDI_BRP_like_22 This conserved domain belongs	99.73
cd07244	121	FosA FosA, a Fosfomycin resistance protein, cataly	99.72
cd07264	125	Glo_EDI_BRP_like_15 This conserved domain belongs	99.72
cd07256	161	HPCD_C_class_II C-terminal domain of 3,4-dihydroxy	99.72
PRK10291	129	glyoxalase I; Provisional	99.72
cd08357	125	Glo_EDI_BRP_like_18 This conserved domain belongs	99.72
cd08348	134	BphC2-C3-RGP6_C_like The single-domain 2,3-dihydro	99.72
PF00903	128	Glyoxalase: Glyoxalase/Bleomycin resistance protei	99.72
cd07258	141	PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cuma	99.72
cd07235	122	MRD Mitomycin C resistance protein (MRD). Mitomyci	99.7
cd08344	112	MhqB_like_N N-terminal domain of MhqB, a type I ex	99.7
cd07262	123	Glo_EDI_BRP_like_19 This conserved domain belongs	99.7
cd08354	122	Glo_EDI_BRP_like_13 This conserved domain belongs	99.69
cd08355	122	Glo_EDI_BRP_like_14 This conserved domain belongs	99.69
cd09012	124	Glo_EDI_BRP_like_24 This conserved domain belongs	99.69
PF12681	108	Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B	99.68
TIGR03211	303	catechol_2_3 catechol 2,3 dioxygenase. Members of	99.68
cd07261	114	Glo_EDI_BRP_like_11 This conserved domain belongs	99.68
cd07254	120	Glo_EDI_BRP_like_20 This conserved domain belongs	99.68
cd08343	131	ED_TypeI_classII_C C-terminal domain of type I, cl	99.68
cd07238	112	Glo_EDI_BRP_like_5 This conserved domain belongs t	99.68
cd08349	112	BLMA_like Bleomycin binding protein (BLMA) and sim	99.68
cd07246	122	Glo_EDI_BRP_like_8 This conserved domain belongs t	99.67
cd08350	120	BLMT_like BLMT, a bleomycin resistance protein enc	99.66
cd06587	112	Glo_EDI_BRP_like This domain superfamily is found	99.65
cd08356	113	Glo_EDI_BRP_like_17 This conserved domain belongs	99.65
TIGR03211	303	catechol_2_3 catechol 2,3 dioxygenase. Members of	99.65
TIGR02295	294	HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase. T	99.64
cd07251	121	Glo_EDI_BRP_like_10 This conserved domain belongs	99.63
TIGR03213	286	23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase	99.63
TIGR03213	286	23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase	99.62
TIGR02295	294	HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase. T	99.62
cd08358	127	Glo_EDI_BRP_like_21 This conserved domain belongs	99.62
PLN02300	286	lactoylglutathione lyase	99.49
KOG2944	170	consensus Glyoxalase [Carbohydrate transport and m	99.49
PF13669	109	Glyoxalase_4: Glyoxalase/Bleomycin resistance prot	99.43
COG3324	127	Predicted enzyme related to lactoylglutathione lya	99.38
COG3565	138	Predicted dioxygenase of extradiol dioxygenase fam	99.33
COG3607	133	Predicted lactoylglutathione lyase [General functi	99.26
COG0346	138	GloA Lactoylglutathione lyase and related lyases [	99.18
cd07250	191	HPPD_C_like C-terminal domain of 4-hydroxyphenylpy	99.17
TIGR01263	353	4HPPD 4-hydroxyphenylpyruvate dioxygenase. This pr	99.12
TIGR01263	353	4HPPD 4-hydroxyphenylpyruvate dioxygenase. This pr	99.05
cd06588	128	PhnB_like Escherichia coli PhnB and similar protei	99.01
PRK01037	357	trmD tRNA (guanine-N(1)-)-methyltransferase/unknow	98.88
PLN02875	398	4-hydroxyphenylpyruvate dioxygenase	98.74
KOG2943	299	consensus Predicted glyoxalase [Carbohydrate trans	98.72
COG2514	265	Predicted ring-cleavage extradiol dioxygenase [Gen	98.65
COG2764	136	PhnB Uncharacterized protein conserved in bacteria	98.64
KOG2943	299	consensus Predicted glyoxalase [Carbohydrate trans	98.58
PF14506	125	CppA_N: CppA N-terminal; PDB: 3E0R_D.	98.45
PF14696	139	Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, H	98.44
KOG0638	381	consensus 4-hydroxyphenylpyruvate dioxygenase [Ami	98.36
PF13468	175	Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B.	98.29
PLN02875	398	4-hydroxyphenylpyruvate dioxygenase	98.17
PRK10148	147	hypothetical protein; Provisional	98.08
COG3185	363	4-hydroxyphenylpyruvate dioxygenase and related he	97.96
COG3185	363	4-hydroxyphenylpyruvate dioxygenase and related he	97.35
KOG0638	381	consensus 4-hydroxyphenylpyruvate dioxygenase [Ami	96.97
PF15067	236	FAM124: FAM124 family	96.45
PF13669	109	Glyoxalase_4: Glyoxalase/Bleomycin resistance prot	95.63
cd08352	125	Glo_EDI_BRP_like_1 This conserved domain belongs t	95.62
cd08346	126	PcpA_N_like N-terminal domain of Sphingobium chlor	95.1
PF06983	116	3-dmu-9_3-mt: 3-demethylubiquinone-9 3-methyltrans	94.95
cd08353	142	Glo_EDI_BRP_like_7 This conserved domain belongs t	94.73
PF14507	101	CppA_C: CppA C-terminal; PDB: 3E0R_D.	94.58
TIGR03645	162	glyox_marine lactoylglutathione lyase family prote	94.24
cd07241	125	Glo_EDI_BRP_like_3 This conserved domain belongs t	93.05
cd07245	114	Glo_EDI_BRP_like_9 This conserved domain belongs t	92.61
cd08347	157	PcpA_C_like C-terminal domain of Sphingobium chlor	92.09
cd07233	121	Glyoxalase_I Glyoxalase I catalyzes the isomerizat	91.64
PF13468	175	Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B.	91.6
cd07242	128	Glo_EDI_BRP_like_6 This conserved domain belongs t	91.16
PRK11478	129	putative lyase; Provisional	90.34
cd07255	125	Glo_EDI_BRP_like_12 This conserved domain belongs	90.02
PF00903	128	Glyoxalase: Glyoxalase/Bleomycin resistance protei	89.96
cd07249	128	MMCE Methylmalonyl-CoA epimerase (MMCE). MMCE, als	89.84
cd07237	154	BphC1-RGP6_C_like C-terminal domain of 2,3-dihydro	88.14
cd07262	123	Glo_EDI_BRP_like_19 This conserved domain belongs	88.12
cd07263	119	Glo_EDI_BRP_like_16 This conserved domain belongs	88.0
PF13670	83	PepSY_2: Peptidase propeptide and YPEB domain This	87.69
cd06587	112	Glo_EDI_BRP_like This domain superfamily is found	87.21
cd07250	191	HPPD_C_like C-terminal domain of 4-hydroxyphenylpy	86.68
cd08342	136	HPPD_N_like N-terminal domain of 4-hydroxyphenylpy	86.24
PLN03042	185	Lactoylglutathione lyase; Provisional	85.59
cd08344	112	MhqB_like_N N-terminal domain of MhqB, a type I ex	84.95
PRK11700	187	hypothetical protein; Provisional	84.74
cd08364	131	FosX FosX, a fosfomycin resistance protein, cataly	84.37
cd07268	149	Glo_EDI_BRP_like_4 This conserved domain belongs t	84.35
cd08348	134	BphC2-C3-RGP6_C_like The single-domain 2,3-dihydro	84.28
TIGR03081	128	metmalonyl_epim methylmalonyl-CoA epimerase. Membe	83.53
PLN02367	233	lactoylglutathione lyase	83.21
PF06185	185	YecM: YecM protein; InterPro: IPR010393 This famil	82.24
cd07235	122	MRD Mitomycin C resistance protein (MRD). Mitomyci	81.67
cd08358	127	Glo_EDI_BRP_like_21 This conserved domain belongs	81.1
PRK04101	139	fosfomycin resistance protein FosB; Provisional	80.49

>PRK11478 putative lyase; Provisional

Probab=99.86  E-value=3e-20  Score=135.33  Aligned_cols=125  Identities=23%  Similarity=0.335  Sum_probs=88.9

Q ss_pred             CcccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCC---CcceEEEEeCCcEEEEeecCCCCCCCCCCCCCCCCccE
Q 029385            8 PLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSF---DFDGAWLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNH   84 (194)
Q Consensus         8 ~~~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~---~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~~h   84 (194)
                      ++.+++++||+|.|+|++++.+||+++|||++..+....   .+...+....+..++++....+...+..  ....+..|
T Consensus         1 ~~~i~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~--~~~~g~~h   78 (129)
T PRK11478          1 MLGLKQVHHIAIIATDYAVSKAFYCDILGFTLQSEVYREARDSWKGDLALNGQYVIELFSFPFPPERPSR--PEACGLRH   78 (129)
T ss_pred             CCCcceecEEEEEcCCHHHHHHHHHHHhCCEecccccccccccceeeEecCCCcEEEEEEecCCCCCCCC--CCCCceeE
Confidence            367899999999999999999999999999986542110   1111122233456777665433222111  23356789


Q ss_pred             EEEeeCCHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEe
Q 029385           85 ISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICN  135 (194)
Q Consensus        85 iaf~v~dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~  135 (194)
                      ++|.|+|+++++++|++.|+++...... ...+.+.+||+||||+.|||++
T Consensus        79 i~f~v~d~~~~~~~l~~~G~~~~~~~~~-~~~g~~~~~~~DPdG~~iEl~~  128 (129)
T PRK11478         79 LAFSVDDIDAAVAHLESHNVKCEAIRVD-PYTQKRFTFFNDPDGLPLELYE  128 (129)
T ss_pred             EEEEeCCHHHHHHHHHHcCCeeeccccC-CCCCCEEEEEECCCCCEEEEEe
Confidence            9999999999999999999998643322 2223488999999999999986

>COG2514 Predicted ring-cleavage extradiol dioxygenase [General function prediction only]

Probab=99.85  E-value=1.6e-20  Score=150.30  Aligned_cols=149  Identities=20%  Similarity=0.269  Sum_probs=119.2

Q ss_pred             cceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeCCcEEEEeecCCCCCCCCCCCCCCCCccEEEEeeC
Q 029385           11 LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQCE   90 (194)
Q Consensus        11 i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~~hiaf~v~   90 (194)
                      -+.++.+.|.|+|++++..||+++||+++..+.+     +...++.+.. .++.....+...... ...+|+.|++|.++
T Consensus         8 ~~~v~~v~L~vrdL~~~~~FY~~ilGL~v~~~~~-----~~v~L~vgg~-~LL~L~q~~~a~~~~-~~~aGLyH~AfLlP   80 (265)
T COG2514           8 PTFVGAVTLNVRDLDSMTSFYQEILGLQVLEETD-----GSVTLGVGGT-PLLTLEQFPDARRPP-PRAAGLYHTAFLLP   80 (265)
T ss_pred             CcEEEEEEEEeccHHHHHHHHHHhhCCeeeeccC-----ceEEEeeCCE-EEEEEEeCCCCCCCC-ccccceeeeeeecC
Confidence            3567789999999999999999999999999984     4444555434 333222211222222 56789999999999


Q ss_pred             ---CHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEecCCCCcCcCCCcchhhcccccccchhhhhhhh
Q 029385           91 ---NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVVPLAGDAVRIRSCTSTVNCNFHQQQI  167 (194)
Q Consensus        91 ---dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~  167 (194)
                         |+.++..++.+.|+.+.+..   ++..+.++||.||+||.||||.+++...|.+..+ .|+|.| .++|.+.+....
T Consensus        81 ~r~~L~~~l~hl~~~~~~l~Ga~---DH~vSEAlYl~DPEGNGIEiYaDrp~~~W~~~~~-~v~m~t-~~ld~~~ll~~~  155 (265)
T COG2514          81 TREDLARVLNHLAEEGIPLVGAS---DHLVSEALYLEDPEGNGIEIYADRPRSTWDWQND-QVKMDT-EPLDVEALLEEA  155 (265)
T ss_pred             CHHHHHHHHHHHHhcCCcccccC---cchhheeeeecCCCCCeEEEEecCChHHhcccCC-eeeecc-cccCHHHHhhhc
Confidence               89999999999999998654   4556799999999999999999999999999877 899999 999999998777


Q ss_pred             hhCC
Q 029385          168 QQEP  171 (194)
Q Consensus       168 ~~~~  171 (194)
                      +.+|
T Consensus       156 ~~~~  159 (265)
T COG2514         156 TKEP  159 (265)
T ss_pred             cccc
Confidence            6444

>cd08353 Glo_EDI_BRP_like_7 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.83  E-value=3.4e-19  Score=132.08  Aligned_cols=124  Identities=16%  Similarity=0.261  Sum_probs=90.2

Q ss_pred             cceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCC--------c---c-eEEEEe---CCcEEEEeecCCCCCCCC--
Q 029385           11 LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFD--------F---D-GAWLFN---YGMGIHLLKSEEPDNLPK--   73 (194)
Q Consensus        11 i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~--------~---~-~~~~~~---~g~~~~l~~~~~~~~~~~--   73 (194)
                      +++++||+|.|+|++++++||++ |||++..+....+        .   . ..+++.   .+..++|+....+.....  
T Consensus         1 ~~~i~Hi~i~v~Dl~~s~~FY~~-LG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~iel~~~~~~~~~~~~~   79 (142)
T cd08353           1 VSRMDNVGIVVRDLEAAIAFFLE-LGLELEGRAEIEGEWADRVTGLDGVRVEIAMLRTPDGHSRLELSKFHHPAVIADHR   79 (142)
T ss_pred             CceeeeEEEEeCCHHHHHHHHHH-cCCEEccccccChHHHHHhcCCCCceEEEEEEeCCCCCceEEEEEecCCCCcCcCC
Confidence            57899999999999999999998 9998866542100        0   0 112222   235788887654433221  


Q ss_pred             CCCCCCCCccEEEEeeCCHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEec
Q 029385           74 AGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC  136 (194)
Q Consensus        74 ~~~~~~~g~~hiaf~v~dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~  136 (194)
                      .......|..||||.|+|+++++++|++.|+++..++... ..+.+.+||+||||+.|||++.
T Consensus        80 ~~~~~~~g~~hia~~v~d~d~~~~~l~~~G~~~~~~~~~~-~~~~r~~~~~DPdG~~iEl~e~  141 (142)
T cd08353          80 PAPVNALGLRRVMFAVDDIDARVARLRKHGAELVGEVVQY-ENSYRLCYIRGPEGILIELAEQ  141 (142)
T ss_pred             CCCCCCCCceEEEEEeCCHHHHHHHHHHCCCceeCCceec-CCCeEEEEEECCCCCEEEeeec
Confidence            1113456788999999999999999999999988755333 2345899999999999999973

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd07243 2_3_CTD_C C-terminal domain of catechol 2,3-dioxygenase

Probab=99.82  E-value=8.4e-19  Score=131.09  Aligned_cols=118  Identities=19%  Similarity=0.221  Sum_probs=83.2

Q ss_pred             cccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCc---ceEEEEeCCcEEEEeecCCCCCCCCCCCCCCCCccEE
Q 029385            9 LCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDF---DGAWLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHI   85 (194)
Q Consensus         9 ~~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~---~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~~hi   85 (194)
                      +.+++|+||+|.|+|++++.+||+++|||++..+....+.   ...|+.. +...|.+....         ....+..|+
T Consensus         2 ~~~~~l~Hv~l~v~Dle~s~~FY~~vLGf~~~~~~~~~~~~~~~~~~l~~-~~~~h~~~~~~---------~~~~~~~Hi   71 (143)
T cd07243           2 IGAHRLDHCLLTGEDIAETTRFFTDVLDFYLAERVVDPDGGTRVGSFLSC-SNKPHDIAFVG---------GPDGKLHHF   71 (143)
T ss_pred             CCCceeCEEEEecCCHHHHHHHHHHhcCCEEEEEEecCCCCeEEEEEEec-CCCcceEEEec---------CCCCCceEE
Confidence            4688999999999999999999999999998665321111   1234322 22333332211         113578899


Q ss_pred             EEeeCCHHH---HHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEec
Q 029385           86 SFQCENMAI---VERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC  136 (194)
Q Consensus        86 af~v~dl~~---~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~  136 (194)
                      ||.|+|+++   +.++|++.|+++...+...+....+.+||.|||||.|||++.
T Consensus        72 af~v~d~~~l~~~~~~l~~~Gv~i~~~p~~~~~~~~~~~yf~DPdG~~iEl~~~  125 (143)
T cd07243          72 SFFLESWEDVLKAGDIISMNDVSIDIGPTRHGITRGQTIYFFDPSGNRNETFAG  125 (143)
T ss_pred             EEEcCCHHHHHHHHHHHHHcCCceEECCcCCCCCCceEEEEECCCCCEEEEecC
Confidence            999998777   568999999998755432221234789999999999999864

This subfamily contains the C-terminal, catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the C-terminal domain.

>cd07253 Glo_EDI_BRP_like_2 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.81  E-value=2.1e-18  Score=123.90  Aligned_cols=122  Identities=26%  Similarity=0.405  Sum_probs=88.4

Q ss_pred             cceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeCCcEEEEeecCCCCCCCCCCCCCCCCccEEEEeeC
Q 029385           11 LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQCE   90 (194)
Q Consensus        11 i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~~hiaf~v~   90 (194)
                      +++|+|+.|.|+|++++++||+++|||+...+.+..  ...++...+..+++....... .+... ....+..|++|.++
T Consensus         1 ~~~l~hi~l~v~d~~~s~~Fy~~~lG~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~-~~~~~-~~~~~~~hi~~~~~   76 (125)
T cd07253           1 IKRIDHVVLTVADIEATLDFYTRVLGMEVVRFGEEV--GRKALRFGSQKINLHPVGGEF-EPAAG-SPGPGSDDLCLITE   76 (125)
T ss_pred             CcccceEEEEecCHHHHHHHHHHHhCceeecccccC--CceEEEeCCEEEEEecCCCcc-CcCcc-CCCCCCceEEEEec
Confidence            578999999999999999999999999998776421  223333334455555433221 11111 34467899999998


Q ss_pred             C-HHHHHHHHHhCCCeEEccceecCc--cceEEEEEeCCCCCEEEEEec
Q 029385           91 N-MAIVERRLKEMKIDYVKSRVEEGG--INVDQLFFHDPDGSMIEICNC  136 (194)
Q Consensus        91 d-l~~~~~~l~~~Gi~~~~~~~~~~g--~~~~~~~~~DPDG~~iEi~~~  136 (194)
                      + +++++++++++|+++...+....+  ...+.+||.|||||.||++++
T Consensus        77 ~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~ve~~~~  125 (125)
T cd07253          77 PPIDELVAHLEAHGVPIEEGPVPRTGARGPITSVYFRDPDGNLIELSNY  125 (125)
T ss_pred             ccHHHHHHHHHHCCceeecCcccccCCCCCccEEEEECCCCCEEEeeeC
Confidence            4 999999999999998766543222  224789999999999999863

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08342 HPPD_N_like N-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HPPD) and hydroxymandelate Synthase (HmaS)

Probab=99.81  E-value=1.3e-18  Score=128.64  Aligned_cols=123  Identities=15%  Similarity=0.125  Sum_probs=87.8

Q ss_pred             eeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeCCcEEEEeecCCCCCCCC-CCCCCCCCccEEEEeeCCH
Q 029385           14 LNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNLPK-AGKNINPKDNHISFQCENM   92 (194)
Q Consensus        14 i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~-~~~~~~~g~~hiaf~v~dl   92 (194)
                      ++|+.|.|+|++++++||+++|||++..+....+....++...+..+.+.....+..... .......+..|++|.|+|+
T Consensus         1 ~~Hi~i~V~D~e~s~~FY~~vLGf~~~~~~~~~~~~~~~~~~g~~~l~l~~~~~~~~~~~~~~~~~~~g~~hia~~V~Dv   80 (136)
T cd08342           1 FDHVEFYVGNAKQLASWFSTKLGFEPVAYHGSEDKASYLLRQGDINFVLNSPLNSFAPVADFLEKHGDGVCDVAFRVDDA   80 (136)
T ss_pred             CeEEEEEeCCHHHHHHHHHHhcCCeEEEecCCCceEEEEEEcCCEEEEEecCCCCCCchHHHHHhcCCceEEEEEEeCCH
Confidence            589999999999999999999999998875421111122222333444443322211100 0012446788999999999


Q ss_pred             HHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEecC
Q 029385           93 AIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD  137 (194)
Q Consensus        93 ~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~  137 (194)
                      ++++++|+++|+++..++... .++.+.++++||||++|||++..
T Consensus        81 da~~~~l~~~G~~v~~~p~~~-~~~~~~~~i~dp~G~~ie~~~~~  124 (136)
T cd08342          81 AAAYERAVARGAKPVQEPVEE-PGELKIAAIKGYGDSLHTLVDRK  124 (136)
T ss_pred             HHHHHHHHHcCCeEccCceec-CCeEEEEEEeccCCcEEEEEecC
Confidence            999999999999999877552 34569999999999999999854

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of HPP to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two, instead of three, su

>cd08352 Glo_EDI_BRP_like_1 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.80  E-value=2.1e-18  Score=123.86  Aligned_cols=121  Identities=26%  Similarity=0.445  Sum_probs=86.7

Q ss_pred             cceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEE--EE--eCCcEEEEeecCCCCCCCCCCCCCCCCccEEE
Q 029385           11 LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAW--LF--NYGMGIHLLKSEEPDNLPKAGKNINPKDNHIS   86 (194)
Q Consensus        11 i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~--~~--~~g~~~~l~~~~~~~~~~~~~~~~~~g~~hia   86 (194)
                      +++++||+|.|.|++++++||+++|||++..+....+ ...|  .+  ..+..++++........+.  .....+..|++
T Consensus         1 ~~~~~hi~l~v~d~~~a~~fy~~~lG~~~~~~~~~~~-~~~~~~~~~~~~~~~i~l~~~~~~~~~~~--~~~~~g~~h~~   77 (125)
T cd08352           1 LFGIHHVAIICSDYEKSKEFYVEILGFKVIREVYRPE-RGSYKLDLLLNGGYQLELFSFPNPPERPS--YPEACGLRHLA   77 (125)
T ss_pred             CCccceEEEEcCCHHHHHHHHHHhcCCEEeeeeecCC-CCcEEEEEecCCCcEEEEEEcCCCCCCCC--CCcCCCceEEE
Confidence            4689999999999999999999999999876542111 1122  12  2345566665443222111  12345788999


Q ss_pred             EeeCCHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEe
Q 029385           87 FQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICN  135 (194)
Q Consensus        87 f~v~dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~  135 (194)
                      |.|+|++++++++++.|+.+...+.. ...+.+.+|+.||+|++|||++
T Consensus        78 ~~v~d~~~~~~~l~~~G~~~~~~~~~-~~~~~~~~~~~DP~G~~iEl~~  125 (125)
T cd08352          78 FSVEDIEAAVKHLKAKGVEVEPIRVD-EFTGKRFTFFYDPDGLPLELYE  125 (125)
T ss_pred             EEeCCHHHHHHHHHHcCCcccccccc-CCCceEEEEEECCCCCEEEecC
Confidence            99999999999999999998764422 2233478999999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>TIGR00068 glyox_I lactoylglutathione lyase

Probab=99.80  E-value=1.9e-18  Score=129.81  Aligned_cols=127  Identities=20%  Similarity=0.281  Sum_probs=87.0

Q ss_pred             cccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcc-eEEEEeCC--cEEEEeecCCCCCCCCCCCCCCCCccEE
Q 029385            9 LCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFD-GAWLFNYG--MGIHLLKSEEPDNLPKAGKNINPKDNHI   85 (194)
Q Consensus         9 ~~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~-~~~~~~~g--~~~~l~~~~~~~~~~~~~~~~~~g~~hi   85 (194)
                      .+.++++||.|.|+|++++.+||+++|||++..+....+.. ..+++..+  .....+........  .......+..|+
T Consensus        13 ~~~~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~~g~~hi   90 (150)
T TIGR00068        13 TKKRRLLHTMLRVGDLDKSLDFYTEVLGMKLLRKRDFPEMKFSLAFLGYGDETSAAVIELTHNWGT--EKYDLGNGFGHI   90 (150)
T ss_pred             cCCceEEEEEEEecCHHHHHHHHHHhcCCEEEEEeccCCCceEEEEecCCCCCCccEEEEeecCCC--CcccCCCceeEE
Confidence            46889999999999999999999999999987654321111 12223222  11112222111110  011223578899


Q ss_pred             EEeeCCHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEecC
Q 029385           86 SFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD  137 (194)
Q Consensus        86 af~v~dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~  137 (194)
                      +|.|+|+++++++|.++|+++...+....+...+.+||+||||++|||++..
T Consensus        91 ~f~v~dld~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  142 (150)
T TIGR00068        91 AIGVDDVYKACERVRALGGNVVREPGPVKGGTTVIAFVEDPDGYKIELIQRK  142 (150)
T ss_pred             EEecCCHHHHHHHHHHcCCccccCCcccCCCceEEEEEECCCCCEEEEEECC
Confidence            9999999999999999999987665433333347889999999999999854

Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits this model twice.

>cd08364 FosX FosX, a fosfomycin resistance protein, catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1

Probab=99.80  E-value=2.5e-18  Score=126.44  Aligned_cols=116  Identities=20%  Similarity=0.400  Sum_probs=83.8

Q ss_pred             cceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCc---ceEEEEeCCcEEEEeecCCCCCCCCCCCCCCCCccEEEE
Q 029385           11 LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDF---DGAWLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISF   87 (194)
Q Consensus        11 i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~---~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~~hiaf   87 (194)
                      +++|+||+|.|+|++++++||+++|||+...+.+...+   ...++...+..+.+.....         ....+..|++|
T Consensus         2 i~~i~hv~l~V~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~---------~~~~~~~Hiaf   72 (131)
T cd08364           2 IEGLSHITLIVKDLNKTTAFLQNIFNAREVYSSGDKTFSLSKEKFFLIGGLWIAIMEGDS---------LQERTYNHIAF   72 (131)
T ss_pred             cccEeEEEEEeCCHHHHHHHHHHHhCCeeEEecccccccccceeEEEcCCeEEEEecCCC---------CCCCCceEEEE
Confidence            67899999999999999999999999988776532111   1123332333444442211         11236789999


Q ss_pred             eeC--CHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEec
Q 029385           88 QCE--NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC  136 (194)
Q Consensus        88 ~v~--dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~  136 (194)
                      .|+  ++++++++|++.|+++........+ ..+.+||+|||||.|||...
T Consensus        73 ~v~~~~ld~~~~~l~~~gv~~~~~~~~~~~-~g~~~yf~DPdG~~iEl~~~  122 (131)
T cd08364          73 KISDSDVDEYTERIKALGVEMKPPRPRVQG-EGRSIYFYDFDNHLFELHTG  122 (131)
T ss_pred             EcCHHHHHHHHHHHHHCCCEEecCCccccC-CceEEEEECCCCCEEEEecC
Confidence            998  8999999999999987754322222 24899999999999999964

This subfamily family contains FosX, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of the configuration at C1 in the presence of Mn(II). The hydrated fosfomycin loses the inhibition activity. FosX is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>TIGR03645 glyox_marine lactoylglutathione lyase family protein

Probab=99.80  E-value=2.5e-18  Score=131.19  Aligned_cols=127  Identities=20%  Similarity=0.294  Sum_probs=87.8

Q ss_pred             cceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCC--------C-------C-----cceEEEE-eCCcEEEEeecCCCC
Q 029385           11 LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGS--------F-------D-----FDGAWLF-NYGMGIHLLKSEEPD   69 (194)
Q Consensus        11 i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~--------~-------~-----~~~~~~~-~~g~~~~l~~~~~~~   69 (194)
                      ..+++||+|.|+|++++++||+++|||++..+...        .       .     ...+++. ..+..++|++...+.
T Consensus         2 ~~~i~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ieL~~~~~~~   81 (162)
T TIGR03645         2 PRTFSHIGISVPDLDAAVKFYTEVLGWYLIMPPTEIVEDDSAIGEMCTDVFGEGWGSFKIAHLSTGDRIGVELFEFKNQE   81 (162)
T ss_pred             CceEEEEEEEeCCHHHHHHHHHHhcCCEEEeccccccCCCCCCCchhhHHhCCCcceeeEEEEecCCCCcEEEEeccCCC
Confidence            35799999999999999999999999987643110        0       0     1111221 234568888776543


Q ss_pred             CCCCCCCCCCCCccEEEEeeCCHHHHHHHHHhCCCeEEcccee--cCc-cceEEEEEeCCCCCEEEEEecC
Q 029385           70 NLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVE--EGG-INVDQLFFHDPDGSMIEICNCD  137 (194)
Q Consensus        70 ~~~~~~~~~~~g~~hiaf~v~dl~~~~~~l~~~Gi~~~~~~~~--~~g-~~~~~~~~~DPDG~~iEi~~~~  137 (194)
                      ...........|..|+||.|+|+++++++++++|+.+......  ..+ ...+.+|++|||||.|||++..
T Consensus        82 ~~~~~~~~~~~g~~Hla~~v~dida~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~  152 (162)
T TIGR03645        82 NPEDNFEYWKTGVFHFCVQDPDVEGLAERIVAAGGKKRMPVPRYYYPGEKPYRMIYMEDPFGNILEIYSHS  152 (162)
T ss_pred             CCCcccccccccceEEEEEcCCHHHHHHHHHHcCCcccCCCccccCCCCCceEEEEEECCCCCEEEEEEcC
Confidence            3221111234789999999999999999999999875432211  111 1237899999999999999864

Members of this protein family share homology with lactoylglutathione lyase (glyoxalase I) and are found mainly in marine members of the gammaproteobacteria, including CPS_0532 from Colwellia psychrerythraea 34H. This family excludes a well-separated, more narrowly distributed paralogous family, exemplified by CPS_3492 from C. psychrerythraea. The function is of this protein family is unknown.

>PLN03042 Lactoylglutathione lyase; Provisional

Probab=99.80  E-value=4.7e-18  Score=132.24  Aligned_cols=128  Identities=21%  Similarity=0.317  Sum_probs=91.1

Q ss_pred             ceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcc-eEEEEe--------------------CCcEEEEeecCCCCC
Q 029385           12 KSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFD-GAWLFN--------------------YGMGIHLLKSEEPDN   70 (194)
Q Consensus        12 ~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~-~~~~~~--------------------~g~~~~l~~~~~~~~   70 (194)
                      -+++|+.|.|+|+++|++||+++|||++..+....+.. ..+++.                    .+..++|+......+
T Consensus        26 ~~~~Ht~i~V~Dle~Si~FY~~vLG~~~~~r~~~~~~~~~~~fl~~~~~~~~~~~~~~~~~~l~~~~~~lEL~~~~~~~~  105 (185)
T PLN03042         26 YIMQQTMFRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDSETAPTDPPERTVWTFGRKATIELTHNWGTES  105 (185)
T ss_pred             cEEEEEEEeeCCHHHHHHHHHhhcCCEEEEEEEcCCCceEEEEEecCCcccCCcchhhcccccccCCCEEEEEEcCCCcc
Confidence            36899999999999999999999999988774311111 112222                    234678876544332


Q ss_pred             CC----CCC-CCCCCCccEEEEeeCCHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEecCCCCc
Q 029385           71 LP----KAG-KNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPV  141 (194)
Q Consensus        71 ~~----~~~-~~~~~g~~hiaf~v~dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~~~p~  141 (194)
                      .+    ... .....|..|++|.|+|+++++++|+++|+++...+..  +.+.+.+|++||||+.|||++..++-.
T Consensus       106 ~p~~~~~~~~~~~~~G~~Hlaf~V~Dvd~~~~~L~~~Gv~v~~~p~~--~~~~~~~fi~DPdG~~IEl~e~~~~~~  179 (185)
T PLN03042        106 DPEFKGYHNGNSDPRGFGHIGITVDDVYKACERFEKLGVEFVKKPDD--GKMKGLAFIKDPDGYWIEIFDLKRIGG  179 (185)
T ss_pred             cccccccccCCCCCCCccEEEEEcCCHHHHHHHHHHCCCeEEeCCcc--CCceeEEEEECCCCCEEEEEECCCchh
Confidence            11    110 0123589999999999999999999999998865532  222367888999999999999877653

>cd07255 Glo_EDI_BRP_like_12 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.79  E-value=7.9e-18  Score=121.70  Aligned_cols=119  Identities=29%  Similarity=0.385  Sum_probs=84.8

Q ss_pred             ceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeCCcEEEEeecCCCCCCCCCCCCCCCCccEEEEeeC-
Q 029385           12 KSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQCE-   90 (194)
Q Consensus        12 ~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~~hiaf~v~-   90 (194)
                      ++|+||.|.|+|++++.+||+++|||++..+.+    ...++...+...++.....+.. .... ....+..|++|.|+ 
T Consensus         1 ~~i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~~----~~~~l~~~~~~~~l~l~~~~~~-~~~~-~~~~~~~hi~f~v~~   74 (125)
T cd07255           1 TRIGAVTLRVADLERSLAFYQDVLGLEVLERTD----STAVLGTGGKRPLLVLEEDPDA-PPAP-PGATGLYHFAILLPS   74 (125)
T ss_pred             CEEEEEEEEECCHHHHHHHHHhccCcEEEEcCC----CEEEEecCCCeEEEEEEeCCCC-Cccc-CCCCcEEEEEEECCC
Confidence            478999999999999999999999999988753    3444433332233322222211 1111 34567889999997 


Q ss_pred             --CHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEecCCC
Q 029385           91 --NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVL  139 (194)
Q Consensus        91 --dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~~~  139 (194)
                        +++++++++.++|+++.... . .+. .+.+||.|||||.|||.+..+.
T Consensus        75 ~~~v~~~~~~l~~~g~~~~~~~-~-~~~-~~~~~~~DPdG~~iEi~~~~~~  122 (125)
T cd07255          75 RADLAAALRRLIELGIPLVGAS-D-HLV-SEALYLSDPEGNGIEIYADRPR  122 (125)
T ss_pred             HHHHHHHHHHHHHcCCceeccc-c-ccc-eeEEEEECCCCCEEEEEEecCc
Confidence              59999999999999876533 2 222 3789999999999999976543

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08347 PcpA_C_like C-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=99.79  E-value=4.1e-18  Score=129.40  Aligned_cols=115  Identities=22%  Similarity=0.380  Sum_probs=83.9

Q ss_pred             eeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeC---CcEEEEeecCCCCCCCCCCCCCCCCccEEEEee
Q 029385           13 SLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNY---GMGIHLLKSEEPDNLPKAGKNINPKDNHISFQC   89 (194)
Q Consensus        13 ~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~---g~~~~l~~~~~~~~~~~~~~~~~~g~~hiaf~v   89 (194)
                      +|+||+|.|+|++++.+||+++|||++..+...   ...|....   +..+.+......   .... ....+..|++|.|
T Consensus         1 gl~HI~i~V~Dle~s~~FY~~~LG~~~~~~~~~---~~~~~~~~~~~~~~l~l~~~~~~---~~~~-~~~~~l~Hiaf~v   73 (157)
T cd08347           1 GLHGVTLTVRDPEATAAFLTDVLGFREVGEEGD---RVRLEEGGGGPGAVVDVLEEPDQ---PRGR-PGAGTVHHVAFRV   73 (157)
T ss_pred             CcccEEEEeCCHHHHHHHHHHhcCCEEEeeeCC---EEEEEecCCCCCCEEEEEeCCCC---CCCc-ccCCceEEEEEEC
Confidence            579999999999999999999999999877531   12233222   455666654211   1111 2345788999999


Q ss_pred             CC---HHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEecC
Q 029385           90 EN---MAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD  137 (194)
Q Consensus        90 ~d---l~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~  137 (194)
                      +|   +++++++|++.|+.+... ...+  ..+.+||.||||+.|||++..
T Consensus        74 ~d~~dvd~~~~~L~~~Gv~~~~~-~~~~--~~~s~yf~DPdG~~iEl~~~~  121 (157)
T cd08347          74 PDDEELEAWKERLEALGLPVSGI-VDRF--YFKSLYFREPGGILFEIATDG  121 (157)
T ss_pred             CCHHHHHHHHHHHHHCCCCcccc-cccc--cEEEEEEECCCCcEEEEEECC
Confidence            97   999999999999986532 2222  248899999999999999875

The C-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>PRK04101 fosfomycin resistance protein FosB; Provisional

Probab=99.79  E-value=3.8e-18  Score=126.61  Aligned_cols=118  Identities=28%  Similarity=0.491  Sum_probs=86.6

Q ss_pred             ccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeCCcEEEEeecCCCCCCCCCCCCCCCCccEEEEee
Q 029385           10 CLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQC   89 (194)
Q Consensus        10 ~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~~hiaf~v   89 (194)
                      +|++|+||.|.|+|++++.+||+++|||++..+..    ...++...+..+.+....   ..+..  ....+..|++|.+
T Consensus         1 ~i~~i~hi~L~v~Dl~~s~~FY~~~lG~~~~~~~~----~~~~~~~~g~~l~l~~~~---~~~~~--~~~~~~~hiaf~v   71 (139)
T PRK04101          1 MLKGINHICFSVSNLEKSIEFYEKVLGAKLLVKGR----KTAYFDLNGLWIALNEEK---DIPRN--EIHQSYTHIAFSI   71 (139)
T ss_pred             CCCcEEEEEEEecCHHHHHHHHHhccCCEEEeecC----eeEEEecCCeEEEeeccC---CCCCc--cCCCCeeEEEEEe
Confidence            36789999999999999999999999999987653    234443334334332211   11111  2234678999999


Q ss_pred             C--CHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEecC
Q 029385           90 E--NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD  137 (194)
Q Consensus        90 ~--dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~  137 (194)
                      +  |+++++++++++|+++...+.... .+.+.+||.|||||.|||++..
T Consensus        72 ~~~dv~~~~~~l~~~G~~i~~~~~~~~-~~~~~~~~~DPdGn~iEl~~~~  120 (139)
T PRK04101         72 EEEDFDHWYQRLKENDVNILPGRERDE-RDKKSIYFTDPDGHKFEFHTGT  120 (139)
T ss_pred             cHHHHHHHHHHHHHCCceEcCCccccC-CCceEEEEECCCCCEEEEEeCC
Confidence            8  999999999999999876543332 2349999999999999999753

>PLN02367 lactoylglutathione lyase

Probab=99.79  E-value=8.5e-18  Score=134.03  Aligned_cols=125  Identities=24%  Similarity=0.367  Sum_probs=90.4

Q ss_pred             eeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCC--cceEEE-------------------EeCCcEEEEeecCCCCCC
Q 029385           13 SLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFD--FDGAWL-------------------FNYGMGIHLLKSEEPDNL   71 (194)
Q Consensus        13 ~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~--~~~~~~-------------------~~~g~~~~l~~~~~~~~~   71 (194)
                      .++|+.|.|+|++++++||+++|||++..+.+..+  +..+++                   ++.+..++|+.....+..
T Consensus        75 ~~~HtmlRVkDle~Sl~FYt~vLGm~ll~r~d~pe~~f~lyFL~~~~~~~~p~d~~~r~~~~~~~~~~LELt~n~g~e~~  154 (233)
T PLN02367         75 IMQQTMYRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTASAPTDPTERTVWTFGQKATIELTHNWGTESD  154 (233)
T ss_pred             EEEEEEEEeCCHHHHHHHHHHhcCCEEeEEEecCCCcEEEEEeecCCccccccccccceeeccCCCCEEEEecCCCCCcc
Confidence            57999999999999999999999999888654221  111221                   122346788765544321


Q ss_pred             C----CCC-CCCCCCccEEEEeeCCHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEecCCC
Q 029385           72 P----KAG-KNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVL  139 (194)
Q Consensus        72 ~----~~~-~~~~~g~~hiaf~v~dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~~~  139 (194)
                      +    ... .....|..||||.|+|+++++++|+++|+++...+..  +...+.+|++||||+.|||++....
T Consensus       155 ~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~erL~a~Gv~~v~~P~~--g~~~riaFIkDPDGn~IEL~e~~~~  225 (233)
T PLN02367        155 PDFKGYHNGNSEPRGFGHIGITVDDVYKACERFEELGVEFVKKPND--GKMKGIAFIKDPDGYWIEIFDLKTI  225 (233)
T ss_pred             ccchhcccCCCCCCCceEEEEEcCCHHHHHHHHHHCCCEEEeCCcc--CCceEEEEEECCCCCEEEEEecccc
Confidence            1    111 0122589999999999999999999999999876533  2224788999999999999987543

>cd07241 Glo_EDI_BRP_like_3 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.79  E-value=5.6e-18  Score=121.97  Aligned_cols=119  Identities=18%  Similarity=0.257  Sum_probs=82.9

Q ss_pred             eeeeEEEEcCCHHHHHHHHHHccCCeEeeeCC--CCCcceEEEEe-CCcEEEEeecCCCCCCCCCCCCCCCCccEEEEee
Q 029385           13 SLNHISLVCRSVEASLDFYQNVLGFFPIRRPG--SFDFDGAWLFN-YGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQC   89 (194)
Q Consensus        13 ~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~--~~~~~~~~~~~-~g~~~~l~~~~~~~~~~~~~~~~~~g~~hiaf~v   89 (194)
                      +++||+|.|+|++++++||+++|||++..+..  ...+...|+.. .+..+++++.......+ .. ....+..|+||.|
T Consensus         1 ~~~Hi~l~v~dl~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~-~~~~g~~hi~f~v   78 (125)
T cd07241           1 KIEHVAIWTKDLERMKAFYVTYFGATSNEKYHNPRKGFESYFLSFDDGARLELMTRPDIAPSP-NE-GERTGWAHLAFSV   78 (125)
T ss_pred             CceEEEEEecCHHHHHHHHHHHhCCEeeceEeCCCCCceEEEEecCCCcEEEEEcCcccCCCc-cc-CCCCceEEEEEEC
Confidence            47899999999999999999999999765421  11122334322 34567777543221111 11 3345789999999


Q ss_pred             C---CHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEE
Q 029385           90 E---NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEIC  134 (194)
Q Consensus        90 ~---dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~  134 (194)
                      +   ++++++++|+++|+++...+... +.+.+.++++|||||.|||.
T Consensus        79 ~~~~~v~~~~~~l~~~g~~~~~~~~~~-~~g~~~~~~~DPdG~~iE~~  125 (125)
T cd07241          79 GSKEAVDELTERLRADGYLIIGEPRTT-GDGYYESVILDPEGNRIEIT  125 (125)
T ss_pred             CCHHHHHHHHHHHHHCCCEEEeCceec-CCCeEEEEEECCCCCEEEeC
Confidence            6   58999999999999988755322 23346678999999999984

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd09013 BphC-JF8_N_like N-terminal, non-catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=99.79  E-value=4.9e-18  Score=122.67  Aligned_cols=113  Identities=24%  Similarity=0.320  Sum_probs=82.9

Q ss_pred             cccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeCC-cEEEEeecCCCCCCCCCCCCCCCCccEEEE
Q 029385            9 LCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYG-MGIHLLKSEEPDNLPKAGKNINPKDNHISF   87 (194)
Q Consensus         9 ~~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~g-~~~~l~~~~~~~~~~~~~~~~~~g~~hiaf   87 (194)
                      |.+++|+|+.|.|+|++++.+||+++|||++..+.+    ...|+...+ ...+.+....         ....+..|++|
T Consensus         2 ~~i~~i~hv~l~v~dl~~a~~FY~~~lG~~~~~~~~----~~~~l~~~~~~~~~~~~l~~---------~~~~~~~h~af   68 (121)
T cd09013           2 FDIAHLAHVELLTPKPEESLWFFTDVLGLEETGREG----QSVYLRAWGDYEHHSLKLTE---------SPEAGLGHIAW   68 (121)
T ss_pred             CCccEeeEEEEEeCCHHHHHHHHHhCcCCEEEeecC----CeEEEEeccCCCccEEEEee---------CCCCceEEEEE
Confidence            578999999999999999999999999999988753    234443322 1222221110         12347889999


Q ss_pred             eeC---CHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEec
Q 029385           88 QCE---NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC  136 (194)
Q Consensus        88 ~v~---dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~  136 (194)
                      .|+   +++++++++++.|+++...... .+. ...+||+|||||.||++..
T Consensus        69 ~v~~~~~v~~~~~~l~~~G~~~~~~~~~-~~~-~~~~~~~DPdG~~iEl~~~  118 (121)
T cd09013          69 RASSPEALERRVAALEASGLGIGWIEGD-PGH-GKAYRFRSPDGHPMELYWE  118 (121)
T ss_pred             EcCCHHHHHHHHHHHHHcCCccccccCC-CCC-cceEEEECCCCCEEEEEEe
Confidence            997   6889999999999987542211 222 3689999999999999964

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C

>cd07265 2_3_CTD_N N-terminal domain of catechol 2,3-dioxygenase

Probab=99.79  E-value=6.8e-18  Score=121.99  Aligned_cols=115  Identities=17%  Similarity=0.256  Sum_probs=81.6

Q ss_pred             cceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeCC-cEEEEeecCCCCCCCCCCCCCCCCccEEEEee
Q 029385           11 LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYG-MGIHLLKSEEPDNLPKAGKNINPKDNHISFQC   89 (194)
Q Consensus        11 i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~g-~~~~l~~~~~~~~~~~~~~~~~~g~~hiaf~v   89 (194)
                      +.+|+|+.|.|+|++++++||+++|||++..+...   ...|+...+ ...+.+....         ....+..|++|.|
T Consensus         2 ~~~l~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~---------~~~~~~~hiaf~v   69 (122)
T cd07265           2 VLRPGHVQLRVLDLEEAIKHYREVLGLDEVGRDDQ---GRVYLKAWDEFDHHSIVLRE---------ADTAGLDFMGFKV   69 (122)
T ss_pred             cceEeEEEEEeCCHHHHHHHHHhccCCEeeeecCC---ceEEEEccCCCcccEEEecc---------CCCCCeeEEEEEe
Confidence            67899999999999999999999999998776421   233433221 1111111110         1134678999999


Q ss_pred             C---CHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEecC
Q 029385           90 E---NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD  137 (194)
Q Consensus        90 ~---dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~  137 (194)
                      +   ++++++++++++|+++...+........+.+||.|||||.||++...
T Consensus        70 ~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iE~~~~~  120 (122)
T cd07265          70 LDDADLEKLEARLQAYGVAVERIPAGELPGVGRRVRFQLPSGHTMELYADK  120 (122)
T ss_pred             CCHHHHHHHHHHHHHCCCcEEEcccCCCCCCceEEEEECCCCCEEEEEEec
Confidence            7   89999999999999987643222211237899999999999998753

This subfamily contains the N-terminal, non-catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the N-terminal do

>cd09011 Glo_EDI_BRP_like_23 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.78  E-value=6.5e-18  Score=121.86  Aligned_cols=117  Identities=22%  Similarity=0.250  Sum_probs=80.3

Q ss_pred             eeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeCCcEEEEeecCCCCCCCCCCCCCCCCccEEEEeeCCH
Q 029385           13 SLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQCENM   92 (194)
Q Consensus        13 ~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~~hiaf~v~dl   92 (194)
                      +++|+.|.|+|++++.+||+++|||++..+.+     ..+.+..+..+++............. ....+..|++|.|+|+
T Consensus         2 ~~~~~~l~v~D~~~a~~FY~~~lG~~~~~~~~-----~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~l~~~v~dv   75 (120)
T cd09011           2 KFKNPLLVVKDIEKSKKFYEKVLGLKVVMDFG-----ENVTFEGGFALQEGYSWLEGISKADI-IEKSNNFELYFEEEDF   75 (120)
T ss_pred             EEEEEEEEECCHHHHHHHHHHhcCCEEeeccC-----ceEEEeccceeccchhhhccCCcccc-cccCCceEEEEEehhh
Confidence            67899999999999999999999999875432     12222333233221111000000001 2234567999999999


Q ss_pred             HHHHHHHHhCCC-eEEccceecCccceEEEEEeCCCCCEEEEEec
Q 029385           93 AIVERRLKEMKI-DYVKSRVEEGGINVDQLFFHDPDGSMIEICNC  136 (194)
Q Consensus        93 ~~~~~~l~~~Gi-~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~  136 (194)
                      ++++++|+++|+ ++..++.. ..++.+.+||+|||||+|||.+.
T Consensus        76 d~~~~~l~~~g~~~~~~~~~~-~~~g~r~~~~~DPdGn~iei~~~  119 (120)
T cd09011          76 DAFLDKLKRYDNIEYVHPIKE-HPWGQRVVRFYDPDKHIIEVGES  119 (120)
T ss_pred             HHHHHHHHhcCCcEEecCccc-CCCccEEEEEECCCCCEEEEecc
Confidence            999999999985 67666543 33556899999999999999863

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07245 Glo_EDI_BRP_like_9 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.78  E-value=6e-18  Score=118.98  Aligned_cols=113  Identities=39%  Similarity=0.684  Sum_probs=85.3

Q ss_pred             eeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeCCc-EEEEeecCCCCCCCCCCCCCCCCccEEEEeeCCH
Q 029385           14 LNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGM-GIHLLKSEEPDNLPKAGKNINPKDNHISFQCENM   92 (194)
Q Consensus        14 i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~g~-~~~l~~~~~~~~~~~~~~~~~~g~~hiaf~v~dl   92 (194)
                      |+|++|.|.|++++++||+++||++...+.... ....|+...+. .+++.........   . ....+..|++|.|+|+
T Consensus         1 i~Hi~l~v~d~~~~~~FY~~~lG~~~~~~~~~~-~~~~~~~~~~~~~i~l~~~~~~~~~---~-~~~~~~~~~~~~v~d~   75 (114)
T cd07245           1 LDHVALRVPDLEASRAFYTDVLGLEEGPRPPFL-FPGAWLYAGDGPQLHLIEEDPPDAL---P-EGPGRDDHIAFRVDDL   75 (114)
T ss_pred             CCeEEEecCCHHHHHHHHHHccCCcccCcCCCC-CCceEEEeCCCcEEEEEecCCCccc---c-CCCcccceEEEEeCCH
Confidence            589999999999999999999999987765321 23455544333 5777655433211   1 2345678999999999


Q ss_pred             HHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEE
Q 029385           93 AIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEI  133 (194)
Q Consensus        93 ~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi  133 (194)
                      +++++++++.|+++...+..  ..+.+.++|.||||+.|||
T Consensus        76 ~~~~~~l~~~g~~~~~~~~~--~~~~~~~~~~DP~G~~iE~  114 (114)
T cd07245          76 DAFRARLKAAGVPYTESDVP--GDGVRQLFVRDPDGNRIEL  114 (114)
T ss_pred             HHHHHHHHHcCCCcccccCC--CCCccEEEEECCCCCEEeC
Confidence            99999999999998876533  2334889999999999996

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases.

>cd08361 PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=99.77  E-value=9e-18  Score=122.29  Aligned_cols=113  Identities=18%  Similarity=0.292  Sum_probs=82.1

Q ss_pred             cccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeCCcEEEEeecCCCCCCCCCCCCCCCCccEEEEe
Q 029385            9 LCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQ   88 (194)
Q Consensus         9 ~~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~~hiaf~   88 (194)
                      .++++|.||.|.|+|++++.+||+++|||++..+.+    ...|+...+....+.... .        .  ++..|++|+
T Consensus         2 ~~~~~l~~v~l~v~d~~~s~~FY~~vLG~~~~~~~~----~~~~l~~~~~~~~i~l~~-~--------~--~~~~~iaf~   66 (124)
T cd08361           2 IELQDIAYVRLGTRDLAGATRFATDILGLQVAERTA----KATYFRSDARDHTLVYIE-G--------D--PAEQASGFE   66 (124)
T ss_pred             ceEEEeeEEEEeeCCHHHHHHHHHhccCceeccCCC----CeEEEEcCCccEEEEEEe-C--------C--CceEEEEEE
Confidence            468899999999999999999999999999876643    345544332222222111 0        1  345789999


Q ss_pred             eCC---HHHHHHHHHhCCCeEEccceecC--ccceEEEEEeCCCCCEEEEEec
Q 029385           89 CEN---MAIVERRLKEMKIDYVKSRVEEG--GINVDQLFFHDPDGSMIEICNC  136 (194)
Q Consensus        89 v~d---l~~~~~~l~~~Gi~~~~~~~~~~--g~~~~~~~~~DPDG~~iEi~~~  136 (194)
                      |++   ++++++++++.|+++...+....  ..+.+.+||+|||||.||++..
T Consensus        67 v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~f~DPdG~~iE~~~~  119 (124)
T cd08361          67 LRDDDALESAATELEQYGHEVRRGTAEECELRKVKAFIAFRDPSGNSIELVVR  119 (124)
T ss_pred             ECCHHHHHHHHHHHHHcCCceEEcCHHHhhcCCcceEEEEECcCCCEEEEEEe
Confidence            985   99999999999999876442111  1123678999999999999864

This subfamily contains the N-terminal, non-catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07252 BphC1-RGP6_N_like N-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=99.77  E-value=1e-17  Score=121.05  Aligned_cols=112  Identities=20%  Similarity=0.225  Sum_probs=81.9

Q ss_pred             ceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeCCcEEEEeecCCCCCCCCCCCCCCCCccEEEEeeC-
Q 029385           12 KSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQCE-   90 (194)
Q Consensus        12 ~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~~hiaf~v~-   90 (194)
                      ++|+||+|.|+|++++.+||+++|||++..+...   ...|+...+..+.+.....          ...+..|++|.++ 
T Consensus         1 ~~l~~v~l~v~Dl~~s~~FY~~~LG~~~~~~~~~---~~~~~~~~~~~~~~~l~~~----------~~~~~~~~~f~v~~   67 (120)
T cd07252           1 KSLGYLGVESSDLDAWRRFATDVLGLQVGDRPED---GALYLRMDDRAWRIAVHPG----------EADDLAYAGWEVAD   67 (120)
T ss_pred             CcccEEEEEeCCHHHHHHHHHhccCceeccCCCC---CeEEEEccCCceEEEEEeC----------CCCceeEEEEEECC
Confidence            4789999999999999999999999998776321   3445444333333333221          1236679999997 


Q ss_pred             --CHHHHHHHHHhCCCeEEcccee---cCccceEEEEEeCCCCCEEEEEecC
Q 029385           91 --NMAIVERRLKEMKIDYVKSRVE---EGGINVDQLFFHDPDGSMIEICNCD  137 (194)
Q Consensus        91 --dl~~~~~~l~~~Gi~~~~~~~~---~~g~~~~~~~~~DPDG~~iEi~~~~  137 (194)
                        |+++++++|++.|+++...+..   ..+ +.+.+||+|||||.||++...
T Consensus        68 ~~dl~~~~~~l~~~Gv~~~~~~~~~~~~~~-~~~~~~~~DPdG~~iE~~~~~  118 (120)
T cd07252          68 EAALDALAARLRAAGVAVEEGSAELAAERG-VEGLIRFADPDGNRHELFWGP  118 (120)
T ss_pred             HHHHHHHHHHHHHcCCeEEEcCHHHHhhCC-CcEEEEEECCCCCEEEEEecc
Confidence              5999999999999998864321   122 237899999999999999753

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the N-terminal, non-catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of 2,3-dihydroxybiphenyl 1,2-dioxygenases. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its N-

>cd07267 THT_Oxygenase_N N-terminal domain of 2,4,5-trihydroxytoluene (THT) oxygenase

Probab=99.77  E-value=2.6e-17  Score=117.76  Aligned_cols=110  Identities=15%  Similarity=0.213  Sum_probs=82.4

Q ss_pred             cceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeCCcEEEEeecCCCCCCCCCCCCCCCCccEEEEeeC
Q 029385           11 LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQCE   90 (194)
Q Consensus        11 i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~~hiaf~v~   90 (194)
                      |++|+||.|.|+|++++.+||++ |||++..+..    ...|+...+....++....         ....+..|++|.|+
T Consensus         1 ~~~l~hv~l~v~Dl~~s~~FY~~-lGl~~~~~~~----~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~af~v~   66 (113)
T cd07267           1 LTDIAHVRFEHPDLDKAERFLTD-FGLEVAARTD----DELYYRGYGTDPFVYVARK---------GEKARFVGAAFEAA   66 (113)
T ss_pred             CcEEEEEEEccCCHHHHHHHHHH-cCCEEEEecC----CeEEEecCCCccEEEEccc---------CCcCcccEEEEEEC
Confidence            57899999999999999999999 9999877653    3456544333333333221         11246789999999


Q ss_pred             CHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEec
Q 029385           91 NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC  136 (194)
Q Consensus        91 dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~  136 (194)
                      |.+++.+.++..|+....... .+ .+.+.+||.|||||.|||+..
T Consensus        67 ~~~~~~~~~~~~g~~~~~~~~-~~-~~~~~~~~~DPdG~~iEl~~~  110 (113)
T cd07267          67 SRADLEKAAALPGASVIDDLE-AP-GGGKRVTLTDPDGFPVELVYG  110 (113)
T ss_pred             CHHHHHHHHHcCCCeeecCCC-CC-CCceEEEEECCCCCEEEEEec
Confidence            999999999999998765432 12 223789999999999999865

This subfamily contains the N-terminal, non-catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>cd08362 BphC5-RrK37_N_like N-terminal, non-catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Rhodococcus rhodochrous K37, and similar proteins

Probab=99.77  E-value=1.7e-17  Score=119.15  Aligned_cols=113  Identities=19%  Similarity=0.262  Sum_probs=84.2

Q ss_pred             cceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeCCcEEEEeecCCCCCCCCCCCCCCCCccEEEEeeC
Q 029385           11 LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQCE   90 (194)
Q Consensus        11 i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~~hiaf~v~   90 (194)
                      +.+|+|+.|.|+|++++++||+++|||+...+.+    ...|+...+...+++....         ...++..|++|.|+
T Consensus         1 ~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~----~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~v~   67 (120)
T cd08362           1 VTALRGVGLGVPDLAAAAAFYREVWGLSVVAEDD----GIVYLRATGSEHHILRLRR---------SDRNRLDVVSFSVA   67 (120)
T ss_pred             CceeeEEEEecCCHHHHHHHHHhCcCcEEEEecC----CEEEEECCCCccEEEEecc---------CCCCCCceEEEEeC
Confidence            5789999999999999999999999999876653    3455443333334443221         11235679999994


Q ss_pred             ---CHHHHHHHHHhCCCeEEccceec-CccceEEEEEeCCCCCEEEEEec
Q 029385           91 ---NMAIVERRLKEMKIDYVKSRVEE-GGINVDQLFFHDPDGSMIEICNC  136 (194)
Q Consensus        91 ---dl~~~~~~l~~~Gi~~~~~~~~~-~g~~~~~~~~~DPDG~~iEi~~~  136 (194)
                         +++++++++++.|+++..++... .+++.+.++|+||+||.|||+..
T Consensus        68 ~~~~l~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~  117 (120)
T cd08362          68 SRADVDALARQVAARGGTVLSEPGATDDPGGGYGFRFFDPDGRLIEFSAD  117 (120)
T ss_pred             CHHHHHHHHHHHHHcCCceecCCcccCCCCCceEEEEECCCCCEEEEEec
Confidence               79999999999999987654221 22334789999999999999874

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the N-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dioxyge

>cd07233 Glyoxalase_I Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

Probab=99.77  E-value=2e-17  Score=118.72  Aligned_cols=115  Identities=28%  Similarity=0.383  Sum_probs=82.2

Q ss_pred             eeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCC--CcceEEEEeCC----cEEEEeecCCCCCCCCCCCCCCCCccEEEE
Q 029385           14 LNHISLVCRSVEASLDFYQNVLGFFPIRRPGSF--DFDGAWLFNYG----MGIHLLKSEEPDNLPKAGKNINPKDNHISF   87 (194)
Q Consensus        14 i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~--~~~~~~~~~~g----~~~~l~~~~~~~~~~~~~~~~~~g~~hiaf   87 (194)
                      +.||.|.|+|++++.+||+++|||++..+....  .....|+...+    ..+++........ + .  ....+..|++|
T Consensus         1 ~~hv~i~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~-~-~--~~~~~~~~i~~   76 (121)
T cd07233           1 FLHTMLRVKDLEKSLDFYTDVLGMKLLRRKDFPEGKFTLVFLGYPDEDSEGVLELTYNWGTEE-P-Y--DNGNGFGHLAF   76 (121)
T ss_pred             CeeEEEEecCcHHHHHHHHhccCCeEEEEEecCCCceEEEEecCCCCCCccEEEEEecCCCCC-C-c--CCCCCeEEEEE
Confidence            579999999999999999999999987754321  12223333222    3455443322111 1 1  22346789999


Q ss_pred             eeCCHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEE
Q 029385           88 QCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEIC  134 (194)
Q Consensus        88 ~v~dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~  134 (194)
                      .|+|++++++++++.|+.+...+....  +.+.+||+|||||.|||+
T Consensus        77 ~v~did~~~~~l~~~G~~~~~~~~~~~--~~~~~~~~DpdG~~iE~~  121 (121)
T cd07233          77 AVDDVYAACERLEEMGVEVTKPPGDGG--MKGIAFIKDPDGYWIELI  121 (121)
T ss_pred             EeCCHHHHHHHHHHCCCEEeeCCccCC--CceEEEEECCCCCEEEeC
Confidence            999999999999999999998765432  337889999999999985

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic gly

>cd08363 FosB FosB, a fosfomycin resistance protein, catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin

Probab=99.76  E-value=1.5e-17  Score=122.31  Aligned_cols=114  Identities=23%  Similarity=0.411  Sum_probs=82.7

Q ss_pred             eeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeCCcEEEEeecCCCCCCCCCCCCCCCCccEEEEeeC--C
Q 029385           14 LNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQCE--N   91 (194)
Q Consensus        14 i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~~hiaf~v~--d   91 (194)
                      |+||.|.|+|++++.+||+++|||++..+..    ...++...+..+.+....   ..+..  ....+..|++|.|+  |
T Consensus         1 i~HV~l~V~Dl~~a~~FY~~~LG~~~~~~~~----~~~~~~~~~~~l~l~~~~---~~~~~--~~~~~~~hiaf~v~~~d   71 (131)
T cd08363           1 INHMTFSVSNLDKSISFYKHVFMEKLLVLGE----KTAYFTIGGTWLALNEEP---DIPRN--EIRQSYTHIAFTIEDSE   71 (131)
T ss_pred             CceEEEEECCHHHHHHHHHHhhCCEEeccCC----ccceEeeCceEEEEEccC---CCCcC--CcCccceEEEEEecHHH
Confidence            6899999999999999999999999876543    223333334444443322   11111  22457789999998  5


Q ss_pred             HHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEecC
Q 029385           92 MAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD  137 (194)
Q Consensus        92 l~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~  137 (194)
                      ++++++++++.|+.+..++.... .+.+.+||.|||||.|||.+..
T Consensus        72 ld~~~~~l~~~G~~~~~~~~~~~-~~~~~~~f~DPdG~~iEl~~~~  116 (131)
T cd08363          72 FDAFYTRLKEAGVNILPGRKRDV-RDRKSIYFTDPDGHKLEVHTGT  116 (131)
T ss_pred             HHHHHHHHHHcCCcccCCCcccc-CcceEEEEECCCCCEEEEecCc
Confidence            99999999999999875443222 2348999999999999999754

This subfamily family contains FosB, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosB catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin, (1R,2S)-epoxypropylphosphonic acid, rendering it inactive. FosB is evolutionarily related to glyoxalase I and type I extradiol dioxygenases

>TIGR03081 metmalonyl_epim methylmalonyl-CoA epimerase

Probab=99.76  E-value=7e-18  Score=122.21  Aligned_cols=123  Identities=15%  Similarity=0.220  Sum_probs=83.2

Q ss_pred             eeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCC--CcceEEEEeCCcEEEEeecCCCCCCCC-CCCCCCCCccEEEEee
Q 029385           13 SLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSF--DFDGAWLFNYGMGIHLLKSEEPDNLPK-AGKNINPKDNHISFQC   89 (194)
Q Consensus        13 ~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~--~~~~~~~~~~g~~~~l~~~~~~~~~~~-~~~~~~~g~~hiaf~v   89 (194)
                      +++|+.|.|+|++++.+||+++|||+........  .....++...+..++|+.......... .......+..|+||.|
T Consensus         1 ~i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~g~~~i~~~v   80 (128)
T TIGR03081         1 RIDHVGIAVPDLEEAAKLYEDVLGAHVSHIEEVPEQGVKVVFIALGNTKVELLEPLGEDSPIAKFLEKNGGGIHHIAIEV   80 (128)
T ss_pred             CCCEEEEEeCCHHHHHHHHHHHhCCCCccceeCCCCCcEEEEEecCCEEEEEEecCCCCChHHHHHhcCCCceEEEEEEc
Confidence            4789999999999999999999999987643211  112233322345677765322211100 0012245778999999


Q ss_pred             CCHHHHHHHHHhCCCeEEccceecCccceEEEEE--eCCCCCEEEEEe
Q 029385           90 ENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFF--HDPDGSMIEICN  135 (194)
Q Consensus        90 ~dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~--~DPDG~~iEi~~  135 (194)
                      +|+++++++++++|+++..++.....++.+.+|+  +||||++||+.+
T Consensus        81 ~di~~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~~~~dp~G~~~E~~~  128 (128)
T TIGR03081        81 DDIEAALETLKEKGVRLIDEEPRIGAGGKPVAFLHPKSTGGVLIELEE  128 (128)
T ss_pred             CCHHHHHHHHHHCCCcccCCCCccCCCCCEEEEecccccCcEEEEecC
Confidence            9999999999999999876422222234466677  799999999974

Members of this protein family are the enzyme methylmalonyl-CoA epimerase (EC 5.1.99.1), also called methylmalonyl-CoA racemase. This enzyme converts (2R)-methylmalonyl-CoA to (2S)-methylmalonyl-CoA, which is then a substrate for methylmalonyl-CoA mutase (TIGR00642). It is known in bacteria, archaea, and as a mitochondrial protein in animals. It is closely related to lactoylglutathione lyase (TIGR00068), which is also called glyoxylase I, and is also a homodimer.

>cd07247 SgaA_N_like N-terminal domain of Streptomyces griseus SgaA (suppression of growth disturbance caused by A-factor at a high concentration under high osmolality during early growth phase), and similar domains

Probab=99.76  E-value=4.3e-17  Score=116.10  Aligned_cols=113  Identities=19%  Similarity=0.175  Sum_probs=82.7

Q ss_pred             eeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeCC-cEEEEeecCCCCCCCCCCCCCCCCccEEEEeeCCH
Q 029385           14 LNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYG-MGIHLLKSEEPDNLPKAGKNINPKDNHISFQCENM   92 (194)
Q Consensus        14 i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~g-~~~~l~~~~~~~~~~~~~~~~~~g~~hiaf~v~dl   92 (194)
                      ++|+.|.|+|++++++||+++|||++..... .+....++...+ ....++......       ...+...|++|.|+|+
T Consensus         1 ~~hi~l~v~d~~~s~~FY~~~lG~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~f~v~di   72 (114)
T cd07247           1 PVWFELPTTDPERAKAFYGAVFGWTFEDMGD-GGGDYAVFSTGGGAVGGLMKAPEPA-------AGSPPGWLVYFAVDDV   72 (114)
T ss_pred             CEEEEeeCCCHHHHHHHHHhccCceeeeccC-CCCceEEEEeCCccEEEEecCCCCC-------CCCCCeEEEEEEeCCH
Confidence            4799999999999999999999999877653 111222222222 234444433221       1234677999999999


Q ss_pred             HHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEe
Q 029385           93 AIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICN  135 (194)
Q Consensus        93 ~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~  135 (194)
                      ++++++|.+.|+++..++...++ +.+.+||+|||||.|+|++
T Consensus        73 ~~~~~~l~~~g~~~~~~~~~~~~-~~~~~~~~DPdG~~~~l~~  114 (114)
T cd07247          73 DAAAARVEAAGGKVLVPPTDIPG-VGRFAVFADPEGAVFGLWQ  114 (114)
T ss_pred             HHHHHHHHHCCCEEEeCCcccCC-cEEEEEEECCCCCEEEeEC
Confidence            99999999999998877654442 3489999999999999974

SgaA suppresses the growth disturbances caused by high osmolarity and a high concentration of A-factor, a microbial hormone, during the early growth phase in Streptomyces griseus. A-factor (2-isocapryloyl-3R-hydroxymethyl-gamma-butyrolactone) controls morphological differentiation and secondary metabolism in Streptomyces griseus. It is a chemical signaling molecule that at a very low concentration acts as a switch for yellow pigment production, aerial mycelium formation, streptomycin production, and streptomycin resistance. The structure and amino acid sequence of SgaA are closely related to a group of antibiotics resistance proteins, including bleomycin resistance protein, mitomycin resistance protein, and fosfomycin resistance proteins. SgaA might also function as a strep

>cd08360 MhqB_like_C C-terminal domain of Burkholderia sp

Probab=99.76  E-value=3.8e-17  Score=120.43  Aligned_cols=117  Identities=22%  Similarity=0.182  Sum_probs=81.7

Q ss_pred             ceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeCC-cEEEEeecCCCCCCCCCCCCCCCCccEEEEeeC
Q 029385           12 KSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYG-MGIHLLKSEEPDNLPKAGKNINPKDNHISFQCE   90 (194)
Q Consensus        12 ~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~g-~~~~l~~~~~~~~~~~~~~~~~~g~~hiaf~v~   90 (194)
                      ++++||+|.|+|++++.+||+++|||++..+...   ...|+...+ ...+.+......       ....+..|++|.|+
T Consensus         2 ~~l~hi~l~v~dl~~s~~FY~~vlGl~~~~~~~~---~~~~~~~~~~~~~~~i~l~~~~-------~~~~g~~hiaf~v~   71 (134)
T cd08360           2 RRLGHVVLFVPDVEAAEAFYRDRLGFRVSDRFKG---RGAFLRAAGGGDHHNLFLIKTP-------APMAGFHHAAFEVG   71 (134)
T ss_pred             ceeeEEEEEcCCHHHHHHHHHHhcCCEEEEEecC---cEEEEECCCCCCCcEEEEecCC-------CCCCcceEEEEEeC
Confidence            5789999999999999999999999998766431   245543322 122222111110       11357899999999


Q ss_pred             CHHHHH---HHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEecCC
Q 029385           91 NMAIVE---RRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV  138 (194)
Q Consensus        91 dl~~~~---~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~~  138 (194)
                      |++++.   ++|++.|+++...+........+.+||+||||+.||++....
T Consensus        72 d~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~y~~DP~G~~iEl~~~~~  122 (134)
T cd08360          72 DIDEVMLGGNHMLRAGYQTGWGPGRHRIGSNYFWYFRDPWGGEVEYGADMD  122 (134)
T ss_pred             CHHHHHHHHHHHHHcCCccccCCCCcCCCccEEEEEECCCCCEEEEEcccc
Confidence            887776   599999999775443322222367999999999999997543

NF100 MhqB and similar proteins; MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. This subfamily contains the C-terminal, catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07240 ED_TypeI_classII_N N-terminal domain of type I, class II extradiol dioxygenases; non-catalytic domain

Probab=99.76  E-value=4.5e-17  Score=116.14  Aligned_cols=110  Identities=22%  Similarity=0.352  Sum_probs=83.9

Q ss_pred             ceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeC-CcEEEEeecCCCCCCCCCCCCCCCCccEEEEeeC
Q 029385           12 KSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNY-GMGIHLLKSEEPDNLPKAGKNINPKDNHISFQCE   90 (194)
Q Consensus        12 ~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~-g~~~~l~~~~~~~~~~~~~~~~~~g~~hiaf~v~   90 (194)
                      ++|+|+.|.|+|++++.+||+++|||++..+.+    ...|+... +....+.....          ...+..|++|.|+
T Consensus         1 ~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~----~~~~~~~~~~~~~~~~~~~~----------~~~~~~h~~~~v~   66 (117)
T cd07240           1 RRIAYAELEVPDLERALEFYTDVLGLTVLDRDA----GSVYLRCSEDDHHSLVLTEG----------DEPGVDALGFEVA   66 (117)
T ss_pred             CceeEEEEecCCHHHHHHHHHhccCcEEEeecC----CeEEEecCCCCcEEEEEEeC----------CCCCceeEEEEcC
Confidence            478999999999999999999999999988763    34555444 22333322211          1246789999998


Q ss_pred             ---CHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEec
Q 029385           91 ---NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC  136 (194)
Q Consensus        91 ---dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~  136 (194)
                         +++++++++++.|+++...+....+ +.+.+||.||+||.||++..
T Consensus        67 ~~~~v~~~~~~l~~~g~~~~~~~~~~~~-~~~~~~~~DP~G~~ie~~~~  114 (117)
T cd07240          67 SEEDLEALAAHLEAAGVAPEEASDPEPG-VGRGLRFQDPDGHLLELFVE  114 (117)
T ss_pred             CHHHHHHHHHHHHHcCCceEEcCccCCC-CceEEEEECCCCCEEEEEEc
Confidence               6899999999999998876532332 34889999999999999965

This family contains the N-terminal, non-catalytic, domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this fa

>cd07266 HPCD_N_class_II N-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD); belongs to the type I class II family of extradiol dioxygenases

Probab=99.75  E-value=3.7e-17  Score=117.75  Aligned_cols=112  Identities=24%  Similarity=0.311  Sum_probs=81.9

Q ss_pred             ccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeCC--cEEEEeecCCCCCCCCCCCCCCCCccEEEE
Q 029385           10 CLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYG--MGIHLLKSEEPDNLPKAGKNINPKDNHISF   87 (194)
Q Consensus        10 ~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~g--~~~~l~~~~~~~~~~~~~~~~~~g~~hiaf   87 (194)
                      ++++++|+.|.|+|++++.+||+++|||++..+.+    ...|+...+  ....+....          ...++..|++|
T Consensus         1 ~~~~i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~~----~~~~~~~~~~~~~~~~~~~~----------~~~~~~~hi~~   66 (121)
T cd07266           1 NILRLGHVELRVTDLEKSREFYVDVLGLVETEEDD----DRIYLRGLEEFIHHSLVLTK----------APVAGLGHIAF   66 (121)
T ss_pred             CcceeeEEEEEcCCHHHHHHHHHhccCCEEeccCC----CeEEEEecCCCceEEEEEee----------CCCCceeEEEE
Confidence            36789999999999999999999999999877653    334443221  122222111          12246889999


Q ss_pred             eeC---CHHHHHHHHHhCCCeEEccce-ecCccceEEEEEeCCCCCEEEEEec
Q 029385           88 QCE---NMAIVERRLKEMKIDYVKSRV-EEGGINVDQLFFHDPDGSMIEICNC  136 (194)
Q Consensus        88 ~v~---dl~~~~~~l~~~Gi~~~~~~~-~~~g~~~~~~~~~DPDG~~iEi~~~  136 (194)
                      .|.   |++++++++++.|+++...+. ...+. .+.+|+.|||||.||++..
T Consensus        67 ~v~~~~dv~~~~~~l~~~g~~~~~~~~~~~~~~-~~~~~~~DPdG~~ve~~~~  118 (121)
T cd07266          67 RVRSEEDLDKAEAFFQELGLPTEWVEAGEEPGQ-GRALRVEDPLGFPIEFYAE  118 (121)
T ss_pred             ECCCHHHHHHHHHHHHHcCCCcccccCCcCCCC-ccEEEEECCCCCEEEEEec
Confidence            995   899999999999999876422 22222 3789999999999999864

This subfamily contains the N-terminal, non-catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of extradiol dioxygenases. The class III 3,4-dihydroxyphenylacetate 2,3-dioxygenases belong to a differ

>cd07242 Glo_EDI_BRP_like_6 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.75  E-value=7.7e-17  Score=117.07  Aligned_cols=118  Identities=25%  Similarity=0.422  Sum_probs=87.8

Q ss_pred             eeeeEEEEcCCHHHHHHHHHHcc---CCeEeeeCCCCCcceEEEEe-CCcEEEEeecCCCCCCCCCCCCCCCCccEEEEe
Q 029385           13 SLNHISLVCRSVEASLDFYQNVL---GFFPIRRPGSFDFDGAWLFN-YGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQ   88 (194)
Q Consensus        13 ~i~hv~l~v~Dle~s~~FY~~vL---G~~~~~~~~~~~~~~~~~~~-~g~~~~l~~~~~~~~~~~~~~~~~~g~~hiaf~   88 (194)
                      +|+||.|.|+|++++.+||+++|   ||++..+...   ...|... .+..+.+.......+.  .......+..|++|.
T Consensus         1 ~i~Hv~i~v~d~~~~~~Fy~~~l~~~G~~~~~~~~~---~~~~~~~~~~~~i~l~~~~~~~~~--~~~~~~~g~~hia~~   75 (128)
T cd07242           1 GIHHVELTVRDLERSRAFYDWLLGLLGFEEVKEWED---GRSWRAGDGGTYLVLQQADGESAG--RHDRRNPGLHHLAFR   75 (128)
T ss_pred             CCceEEEEeCCHHHHHHHHHHHHhhcCCEEEEeecc---CceEEecCCceEEEEEecccCCCc--ccccCCcCeeEEEEE
Confidence            57899999999999999999999   9998877521   2345443 4456667655433221  111334567899999


Q ss_pred             eC---CHHHHHHHHHhCCCeEEccceec--CccceEEEEEeCCCCCEEEEEe
Q 029385           89 CE---NMAIVERRLKEMKIDYVKSRVEE--GGINVDQLFFHDPDGSMIEICN  135 (194)
Q Consensus        89 v~---dl~~~~~~l~~~Gi~~~~~~~~~--~g~~~~~~~~~DPDG~~iEi~~  135 (194)
                      |+   |+++++++++++|+++...+...  ...+.+.+||+|||||.|||+.
T Consensus        76 v~~~~d~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~DpdG~~ie~~~  127 (128)
T cd07242          76 APSREAVDELYARLAKRGAEILYAPREPYAGGPGYYALFFEDPDGIRLELVA  127 (128)
T ss_pred             cCCHHHHHHHHHHHHHcCCeEecCCcccccCCCcEEEEEEECCCCcEEEEEe
Confidence            97   58999999999999988866431  1223489999999999999985

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07263 Glo_EDI_BRP_like_16 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.75  E-value=5.9e-17  Score=115.19  Aligned_cols=114  Identities=18%  Similarity=0.279  Sum_probs=81.2

Q ss_pred             eEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEE-e-CC---cEEEEeecCCCCCCCCCCCCCCCCccEEEEeeC
Q 029385           16 HISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLF-N-YG---MGIHLLKSEEPDNLPKAGKNINPKDNHISFQCE   90 (194)
Q Consensus        16 hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~-~-~g---~~~~l~~~~~~~~~~~~~~~~~~g~~hiaf~v~   90 (194)
                      ||+|.|.|++++++||+++|||++..+....+ ...|+. . .+   ..+++.....+.  .... ....+..|++|.|+
T Consensus         1 Hv~l~v~d~~~~~~fY~~~lG~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~-~~~~~~~~~~~~v~   76 (119)
T cd07263           1 LVSLYVDDQDKALAFYTEKLGFEVREDVPMGG-GFRWVTVAPPGSPETSLVLAPPANPA--AMSG-LQPGGTPGLVLATD   76 (119)
T ss_pred             CceEEeCCHHHHHHHHHhccCeEEEEeeccCC-CcEEEEEeCCCCCeeEEEEeCCCCcc--cccc-ccCCCceEEEEEeh
Confidence            89999999999999999999999987753111 223332 2 12   233333322211  1111 23457789999999


Q ss_pred             CHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEe
Q 029385           91 NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICN  135 (194)
Q Consensus        91 dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~  135 (194)
                      |++++++++.++|+++...+....  ..+.+|++|||||.|||++
T Consensus        77 di~~~~~~l~~~g~~~~~~~~~~~--~~~~~~~~DP~G~~ie~~~  119 (119)
T cd07263          77 DIDATYEELKARGVEFSEEPREMP--YGTVAVFRDPDGNLFVLVQ  119 (119)
T ss_pred             HHHHHHHHHHhCCCEEeeccccCC--CceEEEEECCCCCEEEEeC
Confidence            999999999999999987763222  2389999999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>PLN02300 lactoylglutathione lyase

Probab=99.75  E-value=3.7e-17  Score=135.32  Aligned_cols=128  Identities=17%  Similarity=0.193  Sum_probs=90.9

Q ss_pred             cccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCC--CcceEEEEeCC--c--EEEEeecCCCCCCCCCCCCCCCCc
Q 029385            9 LCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSF--DFDGAWLFNYG--M--GIHLLKSEEPDNLPKAGKNINPKD   82 (194)
Q Consensus         9 ~~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~--~~~~~~~~~~g--~--~~~l~~~~~~~~~~~~~~~~~~g~   82 (194)
                      +.+++|+|+.|.|+|++++++||+++|||++..+....  .+...|+...+  .  .+.+....   ... . ...+.+.
T Consensus        20 ~~i~~l~Hv~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~---~~~-~-~~~~~g~   94 (286)
T PLN02300         20 KDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSNFVVELTYNY---GVD-K-YDIGTGF   94 (286)
T ss_pred             cccceEEEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCcEEEEEEccCCCCCceEEEEeccC---CCC-c-cccCCCc
Confidence            67999999999999999999999999999987654211  12233432111  1  12232211   111 1 1334678


Q ss_pred             cEEEEeeCCHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEecCCCCc
Q 029385           83 NHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPV  141 (194)
Q Consensus        83 ~hiaf~v~dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~~~p~  141 (194)
                      .|++|.|+|+++++++++++|+++...+...++.+.+.+||+||||+.|||++....|.
T Consensus        95 ~hia~~v~dvd~~~~~l~~~G~~i~~~~~~~~~g~~~~~~~~DPdG~~iEl~~~~~~~~  153 (286)
T PLN02300         95 GHFGIAVEDVAKTVELVKAKGGKVTREPGPVKGGKSVIAFVKDPDGYKFELIQRGPTPE  153 (286)
T ss_pred             cEEEEEeCCHHHHHHHHHHCCCeeecCCcccCCCceEEEEEECCCCCEEEEEeCCCCCC
Confidence            89999999999999999999999887664443333467899999999999999765543

>cd09014 BphC-JF8_C_like C-terminal, catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=99.75  E-value=8.1e-17  Score=123.26  Aligned_cols=122  Identities=19%  Similarity=0.279  Sum_probs=84.0

Q ss_pred             cccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCC--CcceEEEEeCCcEEEEeecCCCCCCCCCCCCCCCCccEEE
Q 029385            9 LCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSF--DFDGAWLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHIS   86 (194)
Q Consensus         9 ~~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~--~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~~hia   86 (194)
                      |.|++|+|++|.|+|++++.+||+++|||++..+....  .....|+...+....+.......       ....+..|+|
T Consensus         2 ~~i~~i~Hi~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~-------~~~~~~~hia   74 (166)
T cd09014           2 VGVRRLDHVNLLASDVDANRDFMEEVLGFRLREQIRLDNGKEAGAWMSVSNKVHDVAYTRDPA-------GARGRLHHLA   74 (166)
T ss_pred             CCcceeeeEEEEcCCHHHHHHHHHHccCCEEEEEEecCCCceEEEEEeCCCCceeEEEecCCC-------CCCCCceEEE
Confidence            67999999999999999999999999999987653211  11234543322222222211110       1124678999


Q ss_pred             EeeCC---HHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEecC
Q 029385           87 FQCEN---MAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD  137 (194)
Q Consensus        87 f~v~d---l~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~  137 (194)
                      |.|+|   +++++++|++.|+++...+...+......+|+.||||++|||++..
T Consensus        75 f~v~~~~~l~~~~~~l~~~Gv~i~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~~  128 (166)
T cd09014          75 YALDTREDVLRAADIFLENGIFIEAGPGKHGIQQTFFLYVYEPGGNRVELFGGG  128 (166)
T ss_pred             EECCCHHHHHHHHHHHHHcCCccccCCcccCCCCceEEEEECCCCCEEEEEEcC
Confidence            99985   5588899999999986554332222335689999999999999873

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C. Th

>cd07257 THT_oxygenase_C The C-terminal domain of 2,4,5-Trihydroxytoluene (THT) oxygenase, which is an extradiol dioxygenease in the 2,4-dinitrotoluene (DNT) degradation pathway

Probab=99.74  E-value=2.5e-17  Score=124.43  Aligned_cols=121  Identities=19%  Similarity=0.143  Sum_probs=79.9

Q ss_pred             eeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCC---CCcceEEEEeCCcEEEEeecCCCCCCCCCCCCCCCCccEEEEee
Q 029385           13 SLNHISLVCRSVEASLDFYQNVLGFFPIRRPGS---FDFDGAWLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQC   89 (194)
Q Consensus        13 ~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~---~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~~hiaf~v   89 (194)
                      +|+||+|.|+|++++++||+++|||++..+...   ......|+...+ +..++...   ...... ....+..||||.|
T Consensus         1 ri~Hv~l~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~---~~~l~~-~~~~g~~Hiaf~v   75 (153)
T cd07257           1 RLGHVVLEVPDFAASFDWYTETFGLKPSDVIYLPGPGNPVAAFLRLDR-GEEYVDHH---TLALAQ-GPESGVHHAAFEV   75 (153)
T ss_pred             CccEEEEecCCHHHHHHHHHHhcCCeEEeeEecCCCCCcEEEEEecCC-CCCcccch---HHHHhc-CCCCceeEEEEEc
Confidence            478999999999999999999999998755321   011233332211 10110000   000000 1146889999999


Q ss_pred             CCHHHHH---HHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEecCC
Q 029385           90 ENMAIVE---RRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV  138 (194)
Q Consensus        90 ~dl~~~~---~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~~  138 (194)
                      +|++++.   ++|++.|+++...+..........+||+|||||.|||+....
T Consensus        76 ~die~~~~~~~~L~~~Gv~v~~~~g~~~~g~~~~~y~~DPdG~~iEl~~~~~  127 (153)
T cd07257          76 HDFDAQGLGHDYLREKGYEHVWGVGRHILGSQIFDYWFDPWGFIVEHYTDGD  127 (153)
T ss_pred             CCHHHHHHHHHHHHHCCCcEeecCCccCCCCCEEEEEECCCCCEEEEEcCce
Confidence            9999986   999999999876543222112356799999999999997653

This subfamily contains the C-terminal, catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>cd08351 ChaP_like ChaP, an enzyme involved in the biosynthesis of the antitumor agent chartreusin (cha); and similar proteins

Probab=99.74  E-value=1e-16  Score=116.21  Aligned_cols=110  Identities=25%  Similarity=0.378  Sum_probs=80.8

Q ss_pred             ceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEE-eCCcEEEEeecCCCCCCCCCCCCCCCCccEEEEeeC
Q 029385           12 KSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLF-NYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQCE   90 (194)
Q Consensus        12 ~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~-~~g~~~~l~~~~~~~~~~~~~~~~~~g~~hiaf~v~   90 (194)
                      .+++|+.|.|+|++++++||+++||++.....+    ...++. ..+..+.+...           ....+..|++|.++
T Consensus         3 ~~~~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~----~~~~~~~~~~~~l~~~~~-----------~~~~~~~h~a~~v~   67 (123)
T cd08351           3 VTLNHTIVPARDREASAEFYAEILGLPWAKPFG----PFAVVKLDNGVSLDFAQP-----------DGEIPPQHYAFLVS   67 (123)
T ss_pred             ceEeEEEEEcCCHHHHHHHHHHhcCCEeeeccC----CEEEEEcCCCcEEEEecC-----------CCCCCcceEEEEeC
Confidence            578999999999999999999999999877442    222322 23333433321           11224579999887


Q ss_pred             --CHHHHHHHHHhCCCeEEccceec------CccceEEEEEeCCCCCEEEEEec
Q 029385           91 --NMAIVERRLKEMKIDYVKSRVEE------GGINVDQLFFHDPDGSMIEICNC  136 (194)
Q Consensus        91 --dl~~~~~~l~~~Gi~~~~~~~~~------~g~~~~~~~~~DPDG~~iEi~~~  136 (194)
                        |++++++++.+.|+++...+...      ..++.+.+||.|||||.|||++.
T Consensus        68 ~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~g~~~~~f~DPdG~~iEl~~~  121 (123)
T cd08351          68 EEEFDRIFARIRERGIDYWADPQRTEPGQINTNDGGRGVYFLDPDGHLLEIITR  121 (123)
T ss_pred             HHHHHHHHHHHHHcCCceecCCcccccccccCCCCeeEEEEECCCCCEEEEEec
Confidence              79999999999999987654321      12345999999999999999986

ChaP is an enzyme involved in the biosynthesis of the potent antitumor agent chartreusin (cha). Cha is an aromatic polyketide glycoside produced by Streptomyces chartreusis. ChaP may play a role as a meta-cleavage dioxygenase in the oxidative rearrangement of the anthracyclic polyketide. ChaP belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd08345 Fosfomycin_RP Fosfomycin resistant protein; inhibits the biological function of fosfomycin

Probab=99.74  E-value=7.6e-17  Score=114.53  Aligned_cols=109  Identities=26%  Similarity=0.456  Sum_probs=78.8

Q ss_pred             eEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeCCcEEEEeecCCCCCCCCCCCCCCCCccEEEEeeC--CHH
Q 029385           16 HISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQCE--NMA   93 (194)
Q Consensus        16 hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~~hiaf~v~--dl~   93 (194)
                      ||.|.|+|++++.+||+++|||+...+.+    ...|+...+..+.+....   ...    ....+..|++|.|+  +++
T Consensus         1 Hv~l~v~d~~~s~~Fy~~~lg~~~~~~~~----~~~~~~~~~~~l~~~~~~---~~~----~~~~~~~hiaf~v~~~d~~   69 (113)
T cd08345           1 HITLIVKDLNKSIAFYRDILGAELIYSSS----KEAYFELAGLWICLMEED---SLQ----GPERTYTHIAFQIQSEEFD   69 (113)
T ss_pred             CeeEEECCHHHHHHHHHHhcCCeeeeccC----ceeEEEecCeEEEeccCC---CcC----CCCCCccEEEEEcCHHHHH
Confidence            89999999999999999999999887763    334443334333332221   111    12346789999995  899


Q ss_pred             HHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEec
Q 029385           94 IVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC  136 (194)
Q Consensus        94 ~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~  136 (194)
                      +++++++++|+++........ .+.+.+|++|||||.|||+..
T Consensus        70 ~~~~~l~~~G~~~~~~~~~~~-~~~~~~~~~DPdG~~iEi~~~  111 (113)
T cd08345          70 EYTERLKALGVEMKPERPRVQ-GEGRSIYFYDPDGHLLELHAG  111 (113)
T ss_pred             HHHHHHHHcCCccCCCccccC-CCceEEEEECCCCCEEEEEeC
Confidence            999999999999875432222 234899999999999999853

This family contains three types of fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. The three types of fosfomycin resistance proteins, employ different mechanisms to render fosfomycin [(1R,2S)-epoxypropylphosphonic acid] inactive. FosB catalyzes the addition of L-cysteine to the epoxide ring of fosfomycin. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1. FosA catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive. Catalytic activities of both FosX and FosA are Mn(II)-dependent, but FosB is activated by Mg(II). Fosfomycin resistant proteins are evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>PRK06724 hypothetical protein; Provisional

Probab=99.74  E-value=7.1e-17  Score=118.62  Aligned_cols=111  Identities=21%  Similarity=0.337  Sum_probs=77.4

Q ss_pred             cceeeeEEEEcCCHHHHHHHHHHcc---CCeEeeeCCCCCcceEEEEeCCcEEEEeecCCCCCCCCCCCCCCCCccEEEE
Q 029385           11 LKSLNHISLVCRSVEASLDFYQNVL---GFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISF   87 (194)
Q Consensus        11 i~~i~hv~l~v~Dle~s~~FY~~vL---G~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~~hiaf   87 (194)
                      ..+|+||.|.|+|+++|++||+++|   |++...+.       .| ...+..+.+....  ...     ....+..|+||
T Consensus         5 ~~~i~Hv~l~V~Dle~s~~FY~~vlg~lg~~~~~~~-------~~-~~g~~~l~l~~~~--~~~-----~~~~g~~h~af   69 (128)
T PRK06724          5 RAGIHHIEFWVANLEESISFYDMLFSIIGWRKLNEV-------AY-STGESEIYFKEVD--EEI-----VRTLGPRHICY   69 (128)
T ss_pred             CcccCEEEEEeCCHHHHHHHHHHHHhhCCcEEeeeE-------ee-eCCCeeEEEecCC--ccc-----cCCCCceeEEE
Confidence            5679999999999999999999977   55543210       11 1111223222211  111     11347789999


Q ss_pred             ee---CCHHHHHHHHHhCCCeEEccceecC--ccceEEEEEeCCCCCEEEEEec
Q 029385           88 QC---ENMAIVERRLKEMKIDYVKSRVEEG--GINVDQLFFHDPDGSMIEICNC  136 (194)
Q Consensus        88 ~v---~dl~~~~~~l~~~Gi~~~~~~~~~~--g~~~~~~~~~DPDG~~iEi~~~  136 (194)
                      .|   ++++++++++.+.|+++..++....  +.+.+.+||.|||||.|||...
T Consensus        70 ~v~~~~dvd~~~~~l~~~G~~~~~~p~~~~~~~~g~~~~~f~DPdG~~iEl~~~  123 (128)
T PRK06724         70 QAINRKVVDEVAEFLSSTKIKIIRGPMEMNHYSEGYYTIDFYDPNGFIIEVAYT  123 (128)
T ss_pred             ecCChHHHHHHHHHHHHCCCEEecCCcccCCCCCCEEEEEEECCCCCEEEEEeC
Confidence            98   5899999999999999876664432  3455899999999999999865

>cd08346 PcpA_N_like N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=99.73  E-value=1.4e-16  Score=114.56  Aligned_cols=116  Identities=22%  Similarity=0.412  Sum_probs=82.3

Q ss_pred             eeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCc--ceEEEEe-----CCcEEEEeecCCCCCCCCCCCCCCCCccEE
Q 029385           13 SLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDF--DGAWLFN-----YGMGIHLLKSEEPDNLPKAGKNINPKDNHI   85 (194)
Q Consensus        13 ~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~--~~~~~~~-----~g~~~~l~~~~~~~~~~~~~~~~~~g~~hi   85 (194)
                      +|+||+|.|.|++++++||+++|||+...+....+.  ...+.+.     .+..++++....... +  ......+..|+
T Consensus         1 ~i~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~-~--~~~~~~~~~hi   77 (126)
T cd08346           1 GLHHVTLITRDAQETVDFYTDVLGLRLVKKTVNQDDPGTYHLFFGDGLGSPGTLLTFFEWPDAGP-K--GRRGPGQIHHI   77 (126)
T ss_pred             CcccEEEEcCChhHhHHHHHHccCCEEeeeEeccCCCceEEEEEecCCCCCCCEEEEEecCCCCC-C--CCCCCCcEEEE
Confidence            478999999999999999999999998876532211  1122222     234466665433221 1  11334567899


Q ss_pred             EEeeC---CHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEE
Q 029385           86 SFQCE---NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEIC  134 (194)
Q Consensus        86 af~v~---dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~  134 (194)
                      +|.|+   ++++++++++++|+++.... ...  +.+.+||+|||||.|||+
T Consensus        78 ~f~v~~~~~~~~~~~~~~~~g~~~~~~~-~~~--~~~~~~~~DP~G~~iE~~  126 (126)
T cd08346          78 AFSVPSEASLDAWRERLRAAGVPVSGVV-DHF--GERSIYFEDPDGLRLELT  126 (126)
T ss_pred             EEEcCCHHHHHHHHHHHHHcCCcccceE-eec--ceEEEEEECCCCCEEEeC
Confidence            99998   57999999999999987543 222  348999999999999984

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07249 MMCE Methylmalonyl-CoA epimerase (MMCE)

Probab=99.73  E-value=8.8e-17  Score=116.15  Aligned_cols=121  Identities=22%  Similarity=0.354  Sum_probs=85.7

Q ss_pred             eeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCC---CcceEEEEeCCcEEEEeecCCCCCCCCC-CCCCCCCccEEEEee
Q 029385           14 LNHISLVCRSVEASLDFYQNVLGFFPIRRPGSF---DFDGAWLFNYGMGIHLLKSEEPDNLPKA-GKNINPKDNHISFQC   89 (194)
Q Consensus        14 i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~---~~~~~~~~~~g~~~~l~~~~~~~~~~~~-~~~~~~g~~hiaf~v   89 (194)
                      |+||.|.|+|++++.+||+++|||++.......   +....++...+..+++++.......... .....++..|++|.|
T Consensus         1 ~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~g~~h~~f~v   80 (128)
T cd07249           1 IDHIGIAVPDLEAAIKFYRDVLGVGPWEEEEVPPEQGVRVAFLGLGNVQIELIEPLDDDSPIAKFLEKRGEGLHHIAFEV   80 (128)
T ss_pred             CcEEEEEeCCHHHHHHHHHHhhCCCCccccccCcccccEEEEEEcCCEEEEEEEECCCCCcHHHHHhcCCCceEEEEEEe
Confidence            579999999999999999999999998765432   1123444445567777765432221110 013457889999999


Q ss_pred             CCHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCC---CCEEEEEe
Q 029385           90 ENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPD---GSMIEICN  135 (194)
Q Consensus        90 ~dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPD---G~~iEi~~  135 (194)
                      +|++++++++++.|+++..++......+ +.+++.||+   |++|||++
T Consensus        81 ~d~~~~~~~l~~~G~~~~~~~~~~~~~g-~~~~~~d~~~~~g~~iE~~~  128 (128)
T cd07249          81 DDIDAALARLKAQGVRLLQEGPRIGAGG-KRVAFLHPKDTGGVLIELVE  128 (128)
T ss_pred             CCHHHHHHHHHHCCCeeeccCCCccCCC-CEEEEEecCCCceEEEEecC
Confidence            9999999999999999987764222223 455555554   99999974

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases.

>cd07239 BphC5-RK37_C_like C-terminal, catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacterium Rhodococcus rhodochrous K37 and similar proteins

Probab=99.73  E-value=1.7e-16  Score=118.73  Aligned_cols=113  Identities=24%  Similarity=0.327  Sum_probs=79.5

Q ss_pred             ceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeCCcEEEEeecCCCCCCCCCCCCCCCCccEEEEeeCC
Q 029385           12 KSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQCEN   91 (194)
Q Consensus        12 ~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~~hiaf~v~d   91 (194)
                      .+++||.|.|+|++++.+||+++|||++....+.   ...|+...+....+....          ...++..|++|.|+|
T Consensus         3 ~~l~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~~---~~~~l~~~~~~~~~~l~~----------~~~~~~~hiaf~v~d   69 (144)
T cd07239           3 VKISHVVLNSPDVDKTVAFYEDVLGFRVSDWLGD---QMAFLRCNSDHHSIAIAR----------GPHPSLNHVAFEMPS   69 (144)
T ss_pred             ceeeEEEEECCCHHHHHHHHHhcCCCEEEEeeCC---eEEEEECCCCcceEEEcc----------CCCCceEEEEEECCC
Confidence            3789999999999999999999999998755321   124433222122221111          113478899999998


Q ss_pred             HHHHH---HHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEecC
Q 029385           92 MAIVE---RRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD  137 (194)
Q Consensus        92 l~~~~---~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~  137 (194)
                      ++++.   ++|++.|+++...+........+.+||+|||||.|||++..
T Consensus        70 ~~~l~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~yf~DPdG~~iE~~~~~  118 (144)
T cd07239          70 IDEVMRGIGRMIDKGIDILWGPGRHGPGDNTFAYFLDPGGFVIEYTSEL  118 (144)
T ss_pred             HHHHHHHHHHHHHcCCceeeCCcccCCCCCEEEEEECCCCcEEEeccCc
Confidence            77775   89999999987654332222236689999999999999864

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the C-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dio

>cd07237 BphC1-RGP6_C_like C-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=99.73  E-value=1.3e-16  Score=120.69  Aligned_cols=118  Identities=18%  Similarity=0.189  Sum_probs=80.9

Q ss_pred             cceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCC-----CcceEEEEeCCcEEEEeecCCCCCCCCCCCCCCCCccEE
Q 029385           11 LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSF-----DFDGAWLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHI   85 (194)
Q Consensus        11 i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~-----~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~~hi   85 (194)
                      .++|+||+|.|+|++++.+||+++|||++..+....     .....|+...+ ..+.+.....        ....+..|+
T Consensus         7 ~~~l~Hi~l~v~Dl~~a~~FY~~~LGl~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~i~~~~~--------~~~~g~~Hi   77 (154)
T cd07237           7 DQGLGHVVLATPDPDEAHAFYRDVLGFRLSDEIDIPLPPGPTARVTFLHCNG-RHHSLALAEG--------PGPKRIHHL   77 (154)
T ss_pred             CCccCEEEEEeCCHHHHHHHHHHccCCEEEEEEcccCCCCCcceEEEEEeCC-CCCCEEEEcC--------CCCceeEEE
Confidence            467999999999999999999999999986642210     11123332222 1111111100        113578899


Q ss_pred             EEeeCCHH---HHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEecC
Q 029385           86 SFQCENMA---IVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD  137 (194)
Q Consensus        86 af~v~dl~---~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~  137 (194)
                      +|.|+|++   +++++|++.|+++..++...+..+.+.+|++||||+.||+....
T Consensus        78 af~V~d~~~l~~~~~~L~~~G~~v~~~~~~~~~~~~~~~y~~DPdG~~iEl~~~~  132 (154)
T cd07237          78 MLEVTSLDDVGRAYDRVRARGIPIAMTLGRHTNDRMLSFYVRTPSGFAIEYGWGG  132 (154)
T ss_pred             EEEcCCHHHHHHHHHHHHHcCCceeccCCccCCCCcEEEEEECCCCcEEEeccCc
Confidence            99998654   68999999999988655433323448899999999999998753

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the C-terminal, catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its C-terminal repeat is represented in thi

>cd08359 Glo_EDI_BRP_like_22 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.73  E-value=2.8e-16  Score=112.69  Aligned_cols=114  Identities=18%  Similarity=0.263  Sum_probs=79.6

Q ss_pred             eEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeCC--cEEEEeecCCCCCCCCCCCCCCCCccEEEEeeCCHH
Q 029385           16 HISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYG--MGIHLLKSEEPDNLPKAGKNINPKDNHISFQCENMA   93 (194)
Q Consensus        16 hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~g--~~~~l~~~~~~~~~~~~~~~~~~g~~hiaf~v~dl~   93 (194)
                      ++.|.|+|++++.+||+++|||+.....+    ....+...+  ..+.+...... ..+...........|++|.|+|++
T Consensus         4 ~~~l~v~D~~~s~~FY~~~lG~~~~~~~~----~~~~~~~~~~~~~l~l~~~~~~-~~~~~~~~~~~~~~~~~~~v~did   78 (119)
T cd08359           4 YPVIVTDDLAETADFYVRHFGFTVVFDSD----WYVSLRSPDGGVELAFMLPGHE-TVPAAQYQFQGQGLILNFEVDDVD   78 (119)
T ss_pred             eeEEEECCHHHHHHHHHHhhCcEEEeccC----cEEEEecCCCceEEEEccCCCC-CCcchhcccCCceEEEEEEECCHH
Confidence            68999999999999999999999887642    122222222  23334332221 111011122334459999999999


Q ss_pred             HHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEe
Q 029385           94 IVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICN  135 (194)
Q Consensus        94 ~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~  135 (194)
                      ++++++.++|+++..++... +++.+.++++||||+.|||++
T Consensus        79 ~~~~~l~~~G~~~~~~~~~~-~~g~~~~~~~DP~G~~ie~~~  119 (119)
T cd08359          79 AEYERLKAEGLPIVLPLRDE-PWGQRHFIVRDPNGVLIDIVQ  119 (119)
T ss_pred             HHHHHHHhcCCCeeeccccC-CCcceEEEEECCCCCEEEEEC
Confidence            99999999999987665333 345589999999999999985

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd07244 FosA FosA, a Fosfomycin resistance protein, catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive

Probab=99.72  E-value=1.3e-16  Score=115.28  Aligned_cols=108  Identities=27%  Similarity=0.440  Sum_probs=79.8

Q ss_pred             eeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeCCcEEEEeecCCCCCCCCCCCCCCCCccEEEEeeC--
Q 029385           13 SLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQCE--   90 (194)
Q Consensus        13 ~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~~hiaf~v~--   90 (194)
                      +|+|+.|.|+|++++.+||+++|||++..+.+    ...|+...+..+.+.....  .      ....+..|++|.++  
T Consensus         1 ~i~hv~l~v~d~~~~~~FY~~vLG~~~~~~~~----~~~~~~~~~~~~~l~~~~~--~------~~~~~~~hi~f~v~~~   68 (121)
T cd07244           1 GINHITLAVSDLERSVAFYVDLLGFKLHVRWD----KGAYLEAGDLWLCLSVDAN--V------GPAKDYTHYAFSVSEE   68 (121)
T ss_pred             CcceEEEEECCHHHHHHHHHHhcCCEEEEecC----CceEEecCCEEEEEecCCC--C------CCCCCeeeEEEEeCHH
Confidence            47899999999999999999999999877653    2344433333333322111  1      12346789999995  


Q ss_pred             CHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEec
Q 029385           91 NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC  136 (194)
Q Consensus        91 dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~  136 (194)
                      |+++++++++++|+++...+. ..+   +.+||.|||||.|||+..
T Consensus        69 dl~~~~~~l~~~G~~~~~~~~-~~~---~~~~f~DPdG~~ie~~~~  110 (121)
T cd07244          69 DFASLKEKLRQAGVKEWKENT-SEG---DSFYFLDPDGHKLELHVG  110 (121)
T ss_pred             HHHHHHHHHHHcCCcccCCCC-CCc---cEEEEECCCCCEEEEEeC
Confidence            899999999999998765432 122   789999999999999964

This subfamily family contains FosA, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosA, catalyzes the addition of glutathione to the antibiotic fosfomycin, (1R,2S)-epoxypropylphosphonic acid, making it inactive. FosA is a Mn(II) dependent enzyme. It is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd07264 Glo_EDI_BRP_like_15 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.72  E-value=2.7e-16  Score=113.48  Aligned_cols=116  Identities=20%  Similarity=0.306  Sum_probs=79.8

Q ss_pred             eeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEE-EeCC-cEEEEeecCCCC-----CC-CCCCCCCCCCccEE
Q 029385           14 LNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWL-FNYG-MGIHLLKSEEPD-----NL-PKAGKNINPKDNHI   85 (194)
Q Consensus        14 i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~-~~~g-~~~~l~~~~~~~-----~~-~~~~~~~~~g~~hi   85 (194)
                      +.|+.|.|+|++++.+||+++|||+.......    ..|. +..+ ..+.+.......     .. +... ...++..|+
T Consensus         1 ~~~~~l~v~D~~~s~~FY~~~lG~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~   75 (125)
T cd07264           1 FGYTIIYVEDVEKTLEFYERAFGFERRFLHES----GDYGELETGETTLAFASHDLAESNLKGGFVKADP-AQPPAGFEI   75 (125)
T ss_pred             CceEEEEEcCHHHHHHHHHHhhCCeEEeecCC----CcEEEecCCcEEEEEEcccccccccccCccCCcc-ccCCCcEEE
Confidence            46999999999999999999999998765331    1222 2222 222232221110     00 1111 223455799


Q ss_pred             EEeeCCHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEe
Q 029385           86 SFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICN  135 (194)
Q Consensus        86 af~v~dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~  135 (194)
                      +|.|+|++++++++.++|+++..++... .++.+.++++|||||.|||++
T Consensus        76 ~~~v~di~~~~~~l~~~G~~~~~~~~~~-~~g~~~~~~~DPdG~~~~~~~  124 (125)
T cd07264          76 AFVTDDVAAAFARAVEAGAVLVSEPKEK-PWGQTVAYVRDINGFLIELCS  124 (125)
T ss_pred             EEEcCCHHHHHHHHHHcCCEeccCCccC-CCCcEEEEEECCCCCEEEEec
Confidence            9999999999999999999988766433 345578999999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07256 HPCD_C_class_II C-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD), which catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate; belongs to the type I class II family of extradiol dioxygenases

Probab=99.72  E-value=2e-16  Score=120.44  Aligned_cols=117  Identities=27%  Similarity=0.373  Sum_probs=77.6

Q ss_pred             ceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCc--ceEEEEeCCcEEEEeecCCCCCCCCCCCCCCCCccEEEEee
Q 029385           12 KSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDF--DGAWLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQC   89 (194)
Q Consensus        12 ~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~--~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~~hiaf~v   89 (194)
                      ++|+||+|.|+|++++.+||+++|||++.......+.  ...|+...+ ..+.+....         ...++..|++|.|
T Consensus         2 ~~l~Hv~l~V~Dl~~s~~FY~~vLGl~~~~~~~~~~~~~~~~~l~~~~-~~~~i~l~~---------~~~~~~~Hiaf~v   71 (161)
T cd07256           2 QRLDHFNLRVPDVDAGLAYYRDELGFRVSEYTEDDDGTTWAAWLHRKG-GVHDTALTG---------GNGPRLHHVAFWV   71 (161)
T ss_pred             ceEEEEEEecCCHHHHHHHHHhccCCEEEEEeccCCCcEEEEEEecCC-CcceEEEec---------CCCCceeEEEEEc
Confidence            5789999999999999999999999988654321111  123332222 222221110         2235788999999


Q ss_pred             CC---HHHHHHHHHhCCCeE--EccceecCccceEEEEEeCCCCCEEEEEecCC
Q 029385           90 EN---MAIVERRLKEMKIDY--VKSRVEEGGINVDQLFFHDPDGSMIEICNCDV  138 (194)
Q Consensus        90 ~d---l~~~~~~l~~~Gi~~--~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~~  138 (194)
                      +|   +++++++|+++|+..  ...+...+....+.+||+|||||.||+++...
T Consensus        72 ~~~~~v~~~~~~L~~~G~~~~~~~~p~~~g~~~~~~~y~~DPdG~~iEl~~~~~  125 (161)
T cd07256          72 PEPHNIIRTCDLLAAAGYSDRIERGPGRHGISNAFFLYLRDPDGHRIEIYTGDY  125 (161)
T ss_pred             CCHHHHHHHHHHHHHcCCCcccccCCCccCCCCceEEEEECCCCCeEEEeecCc
Confidence            85   788889999999863  22222212123367999999999999997553

This subfamily contains the C-terminal, catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of

>PRK10291 glyoxalase I; Provisional

Probab=99.72  E-value=2e-16  Score=115.57  Aligned_cols=114  Identities=25%  Similarity=0.353  Sum_probs=77.1

Q ss_pred             EEEcCCHHHHHHHHHHccCCeEeeeCCCCCc--ceEEEEeCC-----cEEEEeecCCCCCCCCCCCCCCCCccEEEEeeC
Q 029385           18 SLVCRSVEASLDFYQNVLGFFPIRRPGSFDF--DGAWLFNYG-----MGIHLLKSEEPDNLPKAGKNINPKDNHISFQCE   90 (194)
Q Consensus        18 ~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~--~~~~~~~~g-----~~~~l~~~~~~~~~~~~~~~~~~g~~hiaf~v~   90 (194)
                      .|.|+|++++++||+++|||+...+....+.  ...|+ ..+     ..+++....   .....  ....+..|+||.|+
T Consensus         1 ~l~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~---~~~~~--~~g~~~~hlaf~V~   74 (129)
T PRK10291          1 MLRVGDLQRSIDFYTNVLGMKLLRTSENPEYKYSLAFV-GYGPETEEAVIELTYNW---GVDKY--ELGTAYGHIALSVD   74 (129)
T ss_pred             CEEecCHHHHHHHHHhccCCEEEEeecCCCCcEEEEEE-ccCCCCCcceEEeeecC---CCCCC--cCCCCeeEEEEEeC
Confidence            3789999999999999999998775432221  12222 222     113332211   11111  22357889999999


Q ss_pred             CHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEecC
Q 029385           91 NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD  137 (194)
Q Consensus        91 dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~  137 (194)
                      |+++++++|++.|+++...+....+...+.+||+||||+.|||++..
T Consensus        75 d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~i~DPdG~~iel~~~~  121 (129)
T PRK10291         75 NAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEK  121 (129)
T ss_pred             CHHHHHHHHHHcCCccccCCcccCCCceEEEEEECCCCCEEEEEEcc
Confidence            99999999999999988654332222236688999999999999865

>cd08357 Glo_EDI_BRP_like_18 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.72  E-value=2.5e-16  Score=113.57  Aligned_cols=116  Identities=19%  Similarity=0.252  Sum_probs=76.2

Q ss_pred             eEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeCCcEEEEeecCCCCCC--CCCCCCCCCCccEEEE--eeCC
Q 029385           16 HISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNL--PKAGKNINPKDNHISF--QCEN   91 (194)
Q Consensus        16 hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~--~~~~~~~~~g~~hiaf--~v~d   91 (194)
                      ||+|.|+|++++++||+++|||++.....    ....+...+..+.+.........  .........+..|++|  .++|
T Consensus         2 Hi~l~v~Dl~~s~~FY~~~lG~~~~~~~~----~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~d   77 (125)
T cd08357           2 HLAIPVRDLEAARAFYGDVLGCKEGRSSE----TWVDFDFFGHQLVAHLSPNFNADASDNAVDGHPVPVPHFGLILSEEE   77 (125)
T ss_pred             eEEEEeCCHHHHHHHHHHhcCCEEeeccC----CcccccccCcEEEEEeccCCCcccccCCCCCCccCCceEEEEEeHHH
Confidence            99999999999999999999999876542    11111122333333322211110  0000122334567654  5679


Q ss_pred             HHHHHHHHHhCCCeEEccceec-C--ccceEEEEEeCCCCCEEEEEe
Q 029385           92 MAIVERRLKEMKIDYVKSRVEE-G--GINVDQLFFHDPDGSMIEICN  135 (194)
Q Consensus        92 l~~~~~~l~~~Gi~~~~~~~~~-~--g~~~~~~~~~DPDG~~iEi~~  135 (194)
                      +++++++|+++|+++..++... .  ..+.+.+||+|||||.|||.+
T Consensus        78 v~~~~~~l~~~g~~~~~~p~~~~~~~~~~~~~~~~~DPdG~~iE~~~  124 (125)
T cd08357          78 FDALAERLEAAGVEFLIEPYTRFEGQPGEQETFFLKDPSGNALEFKA  124 (125)
T ss_pred             HHHHHHHHHHCCCcEecCcceeccCCcCceeEEEEECCCCCEEEEee
Confidence            9999999999999988765432 1  123589999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08348 BphC2-C3-RGP6_C_like The single-domain 2,3-dihydroxybiphenyl 1,2-dioxygenases (BphC, EC 1

Probab=99.72  E-value=5.2e-16  Score=113.74  Aligned_cols=116  Identities=28%  Similarity=0.382  Sum_probs=82.1

Q ss_pred             eeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeC-C--cEEEEeecCCCCCCCCCCCCCCCCccEEEEee
Q 029385           13 SLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNY-G--MGIHLLKSEEPDNLPKAGKNINPKDNHISFQC   89 (194)
Q Consensus        13 ~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~-g--~~~~l~~~~~~~~~~~~~~~~~~g~~hiaf~v   89 (194)
                      +|+||.|.|+|++++++||+++|||++..+...  ....|+... +  ..+.+........    . ....+..|++|.|
T Consensus         1 ~i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~--~~~~~~~~~~~~~~~l~l~~~~~~~~----~-~~~~~~~h~~f~v   73 (134)
T cd08348           1 RLSHVVLYVRDLEAMVRFYRDVLGFTVTDRGPL--GGLVFLSRDPDEHHQIALITGRPAAP----P-PGPAGLNHIAFEV   73 (134)
T ss_pred             CeeEEEEEecCHHHHHHHHHHhcCCEEEeeccC--CcEEEEEecCCCceEEEEEecCCCCC----C-CCCCCceEEEEEe
Confidence            478999999999999999999999998776531  122343222 1  2344444332211    1 2345778999999


Q ss_pred             CCHH---HHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEecCC
Q 029385           90 ENMA---IVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV  138 (194)
Q Consensus        90 ~dl~---~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~~  138 (194)
                      +|++   ++++++.+.|+++.... ..+  +.+.+||+|||||.|||++..+
T Consensus        74 ~~~~~v~~~~~~l~~~G~~~~~~~-~~~--~~~~~~~~DP~G~~ie~~~~~~  122 (134)
T cd08348          74 DSLDDLRDLYERLRAAGITPVWPV-DHG--NAWSIYFRDPDGNRLELFVDTP  122 (134)
T ss_pred             CCHHHHHHHHHHHHHCCCCccccC-CCC--ceeEEEEECCCCCEEEEEEcCC
Confidence            9755   57899999999877654 222  2388999999999999997654

13.11.39) from Rhodococcus globerulus P6, BphC2-RGP6 and BphC3-RGP6, and similar proteins. This subfamily contains Rhodococcus globerulus P6 BphC2-RGP6 and BphC3-RGP6, and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, yielding 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid. This is the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Most type I extradiol dioxygenases are activated by Fe(II). Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC2-RGP6 and BphC3-RGP6 are

>PF00903 Glyoxalase: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily This Prosite is specific to glyoxalases This Prosite is specific to Extradiol ring-cleavage dioxygenases This prints entry is specific to bleomycin resistance protein

Probab=99.72  E-value=6.5e-17  Score=116.24  Aligned_cols=121  Identities=25%  Similarity=0.357  Sum_probs=82.5

Q ss_pred             eeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCC-CC---cceEEEEeCCcEEEEeecCCCCCCCCCCCCCCCCccEEEEe
Q 029385           13 SLNHISLVCRSVEASLDFYQNVLGFFPIRRPGS-FD---FDGAWLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQ   88 (194)
Q Consensus        13 ~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~-~~---~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~~hiaf~   88 (194)
                      +|+||+|.|+|++++++||+++|||++...... ..   ....++......+.+.....+............+..|++|.
T Consensus         1 ~l~Hi~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~   80 (128)
T PF00903_consen    1 GLDHIAIRVKDLEKAIDFYTDVLGFRLVEESDNDGEGGDLRIAFLRIGEGHIELFLNPSPPPRASGHSFPEHGGHHIAFL   80 (128)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTTSEEEEEEEEESTTEEEEEEEEESTSSCEEEEEEESSSSSSEEEHHHSHTSEEEEEE
T ss_pred             CeEEEEEEcCCHHHHHHHHHHHhCCcEEeeeccccccccccceeecccccceeeeeeccccccccccccccccceeEEEE
Confidence            689999999999999999999999999887641 11   11223333445666665543332211100000144567776


Q ss_pred             eC---CHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEE
Q 029385           89 CE---NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEI  133 (194)
Q Consensus        89 v~---dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi  133 (194)
                      +.   |+++++++|++.|+++...+..........+|++||||+.|||
T Consensus        81 ~~~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~y~~Dp~G~~iE~  128 (128)
T PF00903_consen   81 AFDVDDLDAAYERLKAQGVEIVEEPDRYYFGSGYSFYFRDPDGNLIEF  128 (128)
T ss_dssp             ESSHHHHHHHHHHHHHTTGEEEEEEEEHSTTCEEEEEEEETTSEEEEE
T ss_pred             eccHHHHHHHHHHHhhcCccEEecCCCCCCCCEEEEEEECCCCCEEEC
Confidence            65   8889999999999999987754443333556899999999997

; InterPro: IPR004360 Glyoxalase I (4.4.1.5 from EC) (lactoylglutathione lyase) catalyzes the first step of the glyoxal pathway. S-lactoylglutathione is then converted by glyoxalase II to lactic acid []. Glyoxalase I is an ubiquitous enzyme which binds one mole of zinc per subunit. The bacterial and yeast enzymes are monomeric while the mammalian one is homodimeric. The sequence of glyoxalase I is well conserved. The domain represented by this entry is found in glyoxalase I and in other related proteins, including fosfomycin resistance proteins FosB [], FosA [], FosX [] and dioxygenases (eg. 4-hydroxyphenylpyruvate dioxygenase).; PDB: 1CJX_A 1NPB_E 3OJT_C 3OJN_A 2IG9_B 3OJJ_B 3OJK_D 1Q0C_D 1F1X_C 3BZA_B ....

>cd07258 PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=99.72  E-value=1.8e-16  Score=118.33  Aligned_cols=112  Identities=17%  Similarity=0.134  Sum_probs=81.9

Q ss_pred             eeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeCC-cEEEEeecCCCCCCCCCCCCCCCCccEEEEeeCC--
Q 029385           15 NHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYG-MGIHLLKSEEPDNLPKAGKNINPKDNHISFQCEN--   91 (194)
Q Consensus        15 ~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~g-~~~~l~~~~~~~~~~~~~~~~~~g~~hiaf~v~d--   91 (194)
                      +||.|.|+|++++.+||+++|||++..+.+.   ...|+...+ ...+.+....         ....+++|+||.|+|  
T Consensus         1 ~Hv~l~V~Dle~s~~Fy~~vLG~~~~~~~~~---~~~~l~~~~~~~~h~~~~~~---------~~~~gl~Hiaf~v~~~~   68 (141)
T cd07258           1 GHVVIGSENFEASRDSLVEDFGFRVSDLIED---RIVFMRCHPNPFHHTFAVGP---------ASSSHFHHVNFMVTDID   68 (141)
T ss_pred             CcEEEecCCHHHHHHHHHhcCCCEeeeeeCC---EEEEEEcCCCCCcceeeecc---------CCCCceEEEEEECCCHH
Confidence            5999999999999999999999998877531   234544333 2233332211         234689999999985  


Q ss_pred             -HHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEecCC
Q 029385           92 -MAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV  138 (194)
Q Consensus        92 -l~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~~  138 (194)
                       +++++++|+++|+++...+........+.+||+||||+.||++....
T Consensus        69 ~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~~~  116 (141)
T cd07258          69 DIGKALYRIKAHDVKVVFGPGRHPPSDSIFFYFLDPDGITVEYSFGME  116 (141)
T ss_pred             HHHHHHHHHHHCCCcEEeCCceECCCCCEEEEEECCCCCEEEEEeCcc
Confidence             56779999999999876654433233488999999999999987643

This subfamily contains the C-terminal, catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as for other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07235 MRD Mitomycin C resistance protein (MRD)

Probab=99.70  E-value=4.9e-16  Score=112.00  Aligned_cols=116  Identities=19%  Similarity=0.252  Sum_probs=77.5

Q ss_pred             eeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeC-CcEEEEeecCCCCCC-CCCCCCCCCCccEEEEeeC-
Q 029385           14 LNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNY-GMGIHLLKSEEPDNL-PKAGKNINPKDNHISFQCE-   90 (194)
Q Consensus        14 i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~-g~~~~l~~~~~~~~~-~~~~~~~~~g~~hiaf~v~-   90 (194)
                      ++||+|.|+|++++++||+. |||++....+..  ...++... +..+.+......... +... ...++..|++|.|+ 
T Consensus         1 ~~~i~l~V~D~~~a~~FY~~-LGf~~~~~~~~~--~~~~~~~~~~~~l~l~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~   76 (122)
T cd07235           1 LDAVGIVVADMAKSLDFYRR-LGFDFPEEADDE--PHVEAVLPGGVRLAWDTVESIRSFTPGWT-PTGGHRIALAFLCET   76 (122)
T ss_pred             CceEEEEeccHHHHHHHHHH-hCceecCCcCCC--CcEEEEeCCCEEEEEEcccceeeecCCCC-CCCCCcEEEEEEcCC
Confidence            57999999999999999975 999986554311  12222222 333433222111100 1111 22345678999875 


Q ss_pred             --CHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEE
Q 029385           91 --NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEIC  134 (194)
Q Consensus        91 --dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~  134 (194)
                        |+++++++|++.|+++..++.. ..++.+.++|+|||||.|||+
T Consensus        77 ~~dvd~~~~~l~~~G~~~~~~~~~-~~~g~~~~~~~DPdG~~iel~  121 (122)
T cd07235          77 PAEVDALYAELVGAGYPGHKEPWD-APWGQRYAIVKDPDGNLVDLF  121 (122)
T ss_pred             HHHHHHHHHHHHHCCCCcCCCCcc-CCCCCEEEEEECCCCCEEEEe
Confidence              8999999999999988776543 234558899999999999997

Mitomycin C (MC) is a naturally occurring antibiotic, and antitumor agent used in the treatment of cancer. Its antitumor activity is exerted primarily through monofunctional and bifunctional alkylation of DNA. MRD binds to MC and functions as a component of the MC exporting system. MC is bound to MRD by a stacking interaction between a His and a Trp. MRD adopts a structural fold similar to bleomycin resistance protein, glyoxalase I, and extradiol dioxygenases; and it has binding sites at an identical location to binding sites in these evolutionarily related enzymes.

>cd08344 MhqB_like_N N-terminal domain of MhqB, a type I extradiol dioxygenase, and similar proteins

Probab=99.70  E-value=4.9e-16  Score=110.85  Aligned_cols=107  Identities=20%  Similarity=0.323  Sum_probs=73.6

Q ss_pred             ceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeCCcEEEEeecCCCCCCCCCCCCCCCCccE--EEEee
Q 029385           12 KSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNH--ISFQC   89 (194)
Q Consensus        12 ~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~~h--iaf~v   89 (194)
                      .+|+||+|.|.|++++.+||+ +|||++..+.     +..++...+.....+.....         ...+..|  ++|.+
T Consensus         1 ~~i~hv~l~v~d~~~s~~FY~-~lG~~~~~~~-----~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~   65 (112)
T cd08344           1 HSIDHFALEVPDLEVARRFYE-AFGLDVREEG-----DGLELRTAGNDHRWARLLEG---------ARKRLAYLSFGIFE   65 (112)
T ss_pred             CceeEEEEecCCHHHHHHHHH-HhCCcEEeec-----CceEEEecCCCceEEEeecC---------CCCceeeEEEEeEh
Confidence            368999999999999999997 6999997664     23444333312111111110         0123344  45555


Q ss_pred             CCHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEec
Q 029385           90 ENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC  136 (194)
Q Consensus        90 ~dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~  136 (194)
                      +|++++++++++.|+++...+ ...  +.+.+||.|||||.|||...
T Consensus        66 ~d~~~~~~~l~~~Gi~~~~~~-~~~--~~~~~~~~DP~Gn~iel~~~  109 (112)
T cd08344          66 DDFAAFARHLEAAGVALAAAP-PGA--DPDGVWFRDPDGNLLQVKVA  109 (112)
T ss_pred             hhHHHHHHHHHHcCCceecCC-CcC--CCCEEEEECCCCCEEEEecC
Confidence            799999999999999987654 222  23679999999999999864

This subfamily contains the N-terminal, non-catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07262 Glo_EDI_BRP_like_19 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.70  E-value=8e-16  Score=111.03  Aligned_cols=112  Identities=19%  Similarity=0.247  Sum_probs=78.4

Q ss_pred             eeeEEEEcCCHHHHHHHHHHc---cCCeEeeeCCCCCcceEEEEeC--CcEEEEeecCCCCCCCCCCCCCCCCccEEEEe
Q 029385           14 LNHISLVCRSVEASLDFYQNV---LGFFPIRRPGSFDFDGAWLFNY--GMGIHLLKSEEPDNLPKAGKNINPKDNHISFQ   88 (194)
Q Consensus        14 i~hv~l~v~Dle~s~~FY~~v---LG~~~~~~~~~~~~~~~~~~~~--g~~~~l~~~~~~~~~~~~~~~~~~g~~hiaf~   88 (194)
                      |+||.|.|+|++++++||+++   ||++...+...   ...++...  +..+.+......  .+    ....+..|++|.
T Consensus         1 l~hv~l~v~d~~~s~~FY~~~f~~lg~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~--~~----~~~~~~~hi~f~   71 (123)
T cd07262           1 IDHVTLGVNDLERARAFYDAVLAPLGIKRVMEDGP---GAVGYGKGGGGPDFWVTKPFDG--EP----ATAGNGTHVAFA   71 (123)
T ss_pred             CcEEEEecCcHHHHHHHHHHHHhhcCceEEeecCC---ceeEeccCCCCceEEEeccccC--CC----CCCCCceEEEEE
Confidence            579999999999999999998   69998766510   12222222  234555432211  11    112345799999


Q ss_pred             eCC---HHHHHHHHHhCCCeEEccceecC--ccceEEEEEeCCCCCEEEEE
Q 029385           89 CEN---MAIVERRLKEMKIDYVKSRVEEG--GINVDQLFFHDPDGSMIEIC  134 (194)
Q Consensus        89 v~d---l~~~~~~l~~~Gi~~~~~~~~~~--g~~~~~~~~~DPDG~~iEi~  134 (194)
                      |++   ++++++++.+.|+.+...+....  +...+.+||+|||||.|||+
T Consensus        72 v~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~DPdG~~ie~~  122 (123)
T cd07262          72 APSREAVDAFHAAALAAGGTDEGAPGLRPHYGPGYYAAYVRDPDGNKIEAV  122 (123)
T ss_pred             CCCHHHHHHHHHHHHHcCCccCCCCCCCCCCCCCeEEEEEECCCCCEEEEe
Confidence            996   88899999999999877654332  23346899999999999997

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08354 Glo_EDI_BRP_like_13 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.69  E-value=1.3e-15  Score=109.25  Aligned_cols=117  Identities=20%  Similarity=0.278  Sum_probs=81.1

Q ss_pred             eeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeCC-cEEEEeecCCCCCCC-CCCCCCCCCccEEEEeeC-
Q 029385           14 LNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYG-MGIHLLKSEEPDNLP-KAGKNINPKDNHISFQCE-   90 (194)
Q Consensus        14 i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~g-~~~~l~~~~~~~~~~-~~~~~~~~g~~hiaf~v~-   90 (194)
                      |.+|.|.|.|++++.+||+++|||++..+.+ .  ...++...+ ..+.++......... ........+..|++|.++ 
T Consensus         1 ~~~~~l~v~d~~~s~~Fy~~~lG~~~~~~~~-~--~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~   77 (122)
T cd08354           1 ILETALYVDDLEAAEAFYEDVLGLELMLKED-R--RLAFFWVGGRGMLLLFDPGATSTPGGEIPPHGGSGPGHFAFAIPA   77 (122)
T ss_pred             CeEEEEEeCCHHHHHHHHHhccCCEEeecCC-C--ceEEEEcCCCcEEEEEecCCcccccCCCCCCCCCCccEEEEEcCH
Confidence            4689999999999999999999999887532 1  223333232 334444433211000 001122457789999995 


Q ss_pred             -CHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEe
Q 029385           91 -NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICN  135 (194)
Q Consensus        91 -dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~  135 (194)
                       |++++++++.++|+++.....  ...+.+.+||.||||+.||+++
T Consensus        78 ~dl~~~~~~l~~~g~~~~~~~~--~~~~~~~~~~~DP~G~~ie~~~  121 (122)
T cd08354          78 EELAEWEAHLEAKGVAIESEVQ--WPRGGRSLYFRDPDGNLLELAT  121 (122)
T ss_pred             HHHHHHHHHHHhcCCceecccc--CCCCeeEEEEECCCCCEEEEec
Confidence             899999999999998876543  2233488999999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08355 Glo_EDI_BRP_like_14 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.69  E-value=2.4e-15  Score=108.52  Aligned_cols=118  Identities=12%  Similarity=0.109  Sum_probs=81.5

Q ss_pred             EEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcce--EEEEeCCcEEEEeecCCCCCCCCCCCCCCCCccEEEEeeCCHHH
Q 029385           17 ISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDG--AWLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQCENMAI   94 (194)
Q Consensus        17 v~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~--~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~~hiaf~v~dl~~   94 (194)
                      ..|.|+|++++++||+++||+++..+....+...  ..+...+..+.+........... ......+..|++|.|+|+++
T Consensus         3 p~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~v~d~d~   81 (122)
T cd08355           3 PTLRYRDAAAAIDWLTDAFGFEERLVVPDDDGGVAHAELRFGDGGVMVGSVRDDYRASS-ARAGGAGTQGVYVVVDDVDA   81 (122)
T ss_pred             EEEEECCHHHHHHHHHHhcCCEEEEEEeCCCCcEEEEEEEECCEEEEEecCCCcccccc-cccCCCceEEEEEEECCHHH
Confidence            5789999999999999999999987652111111  12222333455543332211111 11234567899999999999


Q ss_pred             HHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEec
Q 029385           95 VERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC  136 (194)
Q Consensus        95 ~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~  136 (194)
                      +++++.+.|+++..++.... ++.+.++++|||||.|+|.++
T Consensus        82 ~~~~l~~~G~~v~~~~~~~~-~g~~~~~~~DPdG~~~~l~~~  122 (122)
T cd08355          82 HYERARAAGAEILREPTDTP-YGSREFTARDPEGNLWTFGTY  122 (122)
T ss_pred             HHHHHHHCCCEEeeCccccC-CCcEEEEEECCCCCEEEEecC
Confidence            99999999999987764432 445889999999999999753

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd09012 Glo_EDI_BRP_like_24 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.69  E-value=9.5e-16  Score=111.09  Aligned_cols=116  Identities=17%  Similarity=0.155  Sum_probs=78.4

Q ss_pred             eeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEe-CCcEEEEeecCCCCCCCCCC--CCCCCCccEEEEeeC-
Q 029385           15 NHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFN-YGMGIHLLKSEEPDNLPKAG--KNINPKDNHISFQCE-   90 (194)
Q Consensus        15 ~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~-~g~~~~l~~~~~~~~~~~~~--~~~~~g~~hiaf~v~-   90 (194)
                      .+|.|.|+|++++++||++ |||+...+....  ...++.. .+..+.+.............  .....+..|++|.|+ 
T Consensus         2 ~~v~l~V~Dl~~s~~FY~~-lGf~~~~~~~~~--~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~l~f~v~~   78 (124)
T cd09012           2 IFINLPVKDLEKSTAFYTA-LGFEFNPQFSDE--KAACMVISDNIFVMLLTEDFFQTFTPKPIADTKKSTEVLISLSADS   78 (124)
T ss_pred             EEEEeecCCHHHHHHHHHH-CCCEEccccCCC--CeEEEEECCceEEEEEcHHHHhhccCCCcccCCCCCeEEEEEeCCC
Confidence            5799999999999999987 899987543221  2233332 23455555432111100000  012345679999998 


Q ss_pred             --CHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEe
Q 029385           91 --NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICN  135 (194)
Q Consensus        91 --dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~  135 (194)
                        ++++++++++++|+++..++...++  .+.+||+|||||.|||+.
T Consensus        79 ~~~vd~~~~~l~~~G~~i~~~p~~~~~--~~~~~~~DPdG~~ie~~~  123 (124)
T cd09012          79 REEVDELVEKALAAGGKEFREPQDHGF--MYGRSFADLDGHLWEVLW  123 (124)
T ss_pred             HHHHHHHHHHHHHCCCcccCCcccCCc--eEEEEEECCCCCEEEEEE
Confidence              5889999999999998876544332  378899999999999984

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>PF12681 Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B 1JIF_B 1JIE_B 1QTO_A 3OXH_A 2PJS_A 2RBB_A 3SK1_B 3SK2_B 3RRI_A

Probab=99.68  E-value=8.3e-16  Score=108.16  Aligned_cols=103  Identities=30%  Similarity=0.517  Sum_probs=75.4

Q ss_pred             EEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeCCcE-----EEEeecCCCCCCCCCCCCCCCCccEEEEeeCCHH
Q 029385           19 LVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMG-----IHLLKSEEPDNLPKAGKNINPKDNHISFQCENMA   93 (194)
Q Consensus        19 l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~g~~-----~~l~~~~~~~~~~~~~~~~~~g~~hiaf~v~dl~   93 (194)
                      |.|+|++++++||+++|||++....+    .... +..+..     ..+......       .....+..|++|.|+|++
T Consensus         1 l~v~d~~~a~~FY~~~lg~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~v~dv~   68 (108)
T PF12681_consen    1 LPVSDLEAAAAFYEDVLGFEVVFDDP----DYVD-FSLGFRFHDGVIEFLQFPDP-------PGPPGGGFHLCFEVEDVD   68 (108)
T ss_dssp             EEESSHHHHHHHHHHTTTSEEEEEET----SEEE-EEETEEEEEEEEEEEEEESS-------SSSSSSEEEEEEEESHHH
T ss_pred             CccCCHHHHHHHHHHhcCCEEEEeCC----CeEE-EEeccchhhhhHHHccCCcc-------ccCCCceeEEEEEEcCHH
Confidence            68999999999999999999999553    2222 222322     233332211       133568899999999999


Q ss_pred             HHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEE
Q 029385           94 IVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEIC  134 (194)
Q Consensus        94 ~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~  134 (194)
                      ++++++.++|+++..++.... ++.+.+++.|||||.|||+
T Consensus        69 ~~~~~l~~~G~~~~~~~~~~~-~g~~~~~~~DPdG~~ie~~  108 (108)
T PF12681_consen   69 ALYERLKELGAEIVTEPRDDP-WGQRSFYFIDPDGNRIEFC  108 (108)
T ss_dssp             HHHHHHHHTTSEEEEEEEEET-TSEEEEEEE-TTS-EEEEE
T ss_pred             HHHHHHHHCCCeEeeCCEEcC-CCeEEEEEECCCCCEEEeC
Confidence            999999999999887765533 3459999999999999996

...

>TIGR03211 catechol_2_3 catechol 2,3 dioxygenase

Probab=99.68  E-value=7.5e-16  Score=128.17  Aligned_cols=121  Identities=20%  Similarity=0.222  Sum_probs=81.3

Q ss_pred             CCcccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCc---ceEEEEeCCcEEEEeecCCCCCCCCCCCCCCCCcc
Q 029385            7 NPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDF---DGAWLFNYGMGIHLLKSEEPDNLPKAGKNINPKDN   83 (194)
Q Consensus         7 ~~~~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~---~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~~   83 (194)
                      ..+.+++|+||+|.|+|++++.+||+++|||++..+....+.   ...|+.. +...+.+...      ..  ....+.+
T Consensus       139 ~~~~~~~i~Hi~l~V~Dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~------~~--~~~g~~~  209 (303)
T TIGR03211       139 RGVGARRLDHCLLYGEDVAENTRFFTEVLGFRLTEQVVLGDGKEQAAAWLSV-SNKAHDIAFV------GD--PEPGKLH  209 (303)
T ss_pred             CCcCceeEEEEeEEeCCHHHHHHHHHHhcCCEEEeeEEcCCCcEEEEEEEEc-CCCCccccee------cC--CCCCceE
Confidence            346788999999999999999999999999998655321111   1223322 2122211110      00  1122388


Q ss_pred             EEEEeeCC---HHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEec
Q 029385           84 HISFQCEN---MAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC  136 (194)
Q Consensus        84 hiaf~v~d---l~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~  136 (194)
                      |+||.|+|   ++++.++|+++|+++..++...+....+.+||+|||||+||++..
T Consensus       210 Hiaf~v~~~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~  265 (303)
T TIGR03211       210 HVSFFLDSWEDVLKAADVMSKNDVSIDIGPTRHGITRGQTIYFFDPSGNRNETFGG  265 (303)
T ss_pred             EEEEEcCCHHHHHHHHHHHHhCCCceeeCCcccCCCCceEEEEECCCCCEEEEecC
Confidence            99999996   555788999999998765533222223799999999999999843

Members of this family all are enzymes active as catechol 2,3 dioxygenase (1.13.11.2), although some members have highly significant activity on catechol derivatives such as 3-methylcatechol, 3-chlorocatechol, and 4-chlorocatechol (see Mars, et al.). This enzyme is also called metapyrocatechase, as it performs a meta-cleavage (an extradiol ring cleavage), in contrast to the ortho-cleavage (intradiol ring cleavage)performed by catechol 1,2-dioxygenase (EC 1.13.11.1), also called pyrocatechase.

>cd07261 Glo_EDI_BRP_like_11 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.68  E-value=1.6e-15  Score=108.04  Aligned_cols=109  Identities=17%  Similarity=0.287  Sum_probs=79.4

Q ss_pred             EEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEE-eCCcEEEEeecCCCCCCCCCCCCCCCCccEEEEeeCC---H
Q 029385           17 ISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLF-NYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQCEN---M   92 (194)
Q Consensus        17 v~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~-~~g~~~~l~~~~~~~~~~~~~~~~~~g~~hiaf~v~d---l   92 (194)
                      +.|.|+|++++++||+++||+++.....    ...++. ..+..+.++.......   .. ....+..|++|.|++   +
T Consensus         2 ~~l~v~d~~~a~~FY~~~lg~~~~~~~~----~~~~~~~~~~~~~~l~~~~~~~~---~~-~~~~~~~~~~~~v~~~~~~   73 (114)
T cd07261           2 VLLYVEDPAASAEFYSELLGREPVELSP----TFALFVLGSGVKLGLWSRHTVEP---AS-DATGGGSELAFMVDDGAAV   73 (114)
T ss_pred             EEEEECCHHHHHHHHHHHcCCCccCCCC----ceEEEEeCCCcEEEEeeccccCC---CC-CCCCCceEEEEEcCCHHHH
Confidence            6799999999999999999999876542    222222 2345566654432211   11 235677899999985   8


Q ss_pred             HHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEe
Q 029385           93 AIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICN  135 (194)
Q Consensus        93 ~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~  135 (194)
                      +++++++.+.|+++..++.. .+++ +.++|+|||||.|||+.
T Consensus        74 ~~~~~~~~~~g~~v~~~~~~-~~~g-~~~~~~DPdGn~ie~~~  114 (114)
T cd07261          74 DALYAEWQAKGVKIIQEPTE-MDFG-YTFVALDPDGHRLRVFA  114 (114)
T ss_pred             HHHHHHHHHCCCeEecCccc-cCCc-cEEEEECCCCCEEEeeC
Confidence            89999999999998876643 3344 68899999999999973

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07254 Glo_EDI_BRP_like_20 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.68  E-value=2.1e-15  Score=108.52  Aligned_cols=111  Identities=22%  Similarity=0.351  Sum_probs=79.0

Q ss_pred             eeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeCCcEEEEeecCCCCCCCCCCCCCCCCccEEEEeeCC---
Q 029385           15 NHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQCEN---   91 (194)
Q Consensus        15 ~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~~hiaf~v~d---   91 (194)
                      .|+.|.|+|++++.+||+++||++...+.+.   ...|... +..+.+.....+.       ....+..|++|.|++   
T Consensus         3 ~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~-------~~~~~~~h~~f~v~~~~d   71 (120)
T cd07254           3 FHVALNVDDLEASIAFYSKLFGVEPTKVRDD---YAKFLLE-DPRLNFVLNERPG-------APGGGLNHLGVQVDSAEE   71 (120)
T ss_pred             EEEEEEeCCHHHHHHHHHHHhCCeEecccCC---eeEEEec-CCceEEEEecCCC-------CCCCCeeEEEEEeCCHHH
Confidence            4999999999999999999999998766431   1233333 2244443322111       111578899999986   


Q ss_pred             HHHHHHHHHhCCCeEEccceecC-ccceEEEEEeCCCCCEEEEEec
Q 029385           92 MAIVERRLKEMKIDYVKSRVEEG-GINVDQLFFHDPDGSMIEICNC  136 (194)
Q Consensus        92 l~~~~~~l~~~Gi~~~~~~~~~~-g~~~~~~~~~DPDG~~iEi~~~  136 (194)
                      ++++++++.+.|+++...+.... +...+.+|++|||||.|||+..
T Consensus        72 l~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~  117 (120)
T cd07254          72 VAEAKARAEAAGLPTFKEEDTTCCYAVQDKVWVTDPDGNAWEVFVT  117 (120)
T ss_pred             HHHHHHHHHHcCCeEEccCCcccccCCcceEEEECCCCCEEEEEEe
Confidence            89999999999999886542221 1123789999999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and types I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08343 ED_TypeI_classII_C C-terminal domain of type I, class II extradiol dioxygenases; catalytic domain

Probab=99.68  E-value=1.7e-15  Score=110.96  Aligned_cols=115  Identities=27%  Similarity=0.299  Sum_probs=79.9

Q ss_pred             eeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCC-cceEEEEeCCcEEEEeecCCCCCCCCCCCCCCCCccEEEEeeCCHH
Q 029385           15 NHISLVCRSVEASLDFYQNVLGFFPIRRPGSFD-FDGAWLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQCENMA   93 (194)
Q Consensus        15 ~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~-~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~~hiaf~v~dl~   93 (194)
                      +||.|.|+|++++.+||+++|||++........ ....|+...+....+.....         ....+..|++|.|+|++
T Consensus         1 ~Hv~l~V~dl~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---------~~~~~~~hl~~~v~d~~   71 (131)
T cd08343           1 DHVVLRTPDVAATAAFYTEVLGFRVSDRVGDPGVDAAAFLRCDEDHHDLALFPG---------PERPGLHHVAFEVESLD   71 (131)
T ss_pred             CcEEEEcCCHHHHHHHHHhcCCCEEEEEEccCCceeEEEEEcCCCcceEEEEcC---------CCCCCeeEEEEEcCCHH
Confidence            599999999999999999999999876543110 12344433232222211111         11457889999999764


Q ss_pred             ---HHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEecCC
Q 029385           94 ---IVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV  138 (194)
Q Consensus        94 ---~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~~  138 (194)
                         ++++++++.|+++...+...+..+.+.+||+||||+.|||++..+
T Consensus        72 ~~~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~~DPdG~~iei~~~~~  119 (131)
T cd08343          72 DILRAADRLAANGIQIEFGPGRHGPGNNLFLYFRDPDGNRVELSAEMY  119 (131)
T ss_pred             HHHHHHHHHHHcCCeeEECCCccCCCCcEEEEEECCCCCEEEEEcCCc
Confidence               788999999999886554333223478899999999999997543

This family contains the C-terminal, catalytic domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this family are

>cd07238 Glo_EDI_BRP_like_5 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.68  E-value=2.8e-15  Score=106.54  Aligned_cols=106  Identities=20%  Similarity=0.229  Sum_probs=76.0

Q ss_pred             eEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeCC---cEEEEeecCCCCCCCCCCCCCCCCccEEEEeeCCH
Q 029385           16 HISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYG---MGIHLLKSEEPDNLPKAGKNINPKDNHISFQCENM   92 (194)
Q Consensus        16 hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~g---~~~~l~~~~~~~~~~~~~~~~~~g~~hiaf~v~dl   92 (194)
                      +..|.|+|++++.+||+++|||+.....+    ...++...+   ..+.+....  .        ......|++|.|+|+
T Consensus         3 ~~~l~v~Dl~~s~~FY~~~lG~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~--~--------~~~~~~~i~~~v~d~   68 (112)
T cd07238           3 VPNLPVADPEAAAAFYADVLGLDVVMDHG----WIATFASPQNMTVQVSLATEG--G--------TATVVPDLSIEVDDV   68 (112)
T ss_pred             cceEecCCHHHHHHHHHHhcCceEEEcCC----ceEEEeecCCCCcEEEEecCC--C--------CCCCCCEEEEEeCCH
Confidence            45789999999999999999999865431    112222222   223333211  1        112356999999999


Q ss_pred             HHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEec
Q 029385           93 AIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC  136 (194)
Q Consensus        93 ~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~  136 (194)
                      +++++++++.|+++...+... .++.+.+|+.|||||.|||++.
T Consensus        69 ~~~~~~l~~~G~~~~~~~~~~-~~g~~~~~~~DP~Gn~i~~~~~  111 (112)
T cd07238          69 DAALARAVAAGFAIVYGPTDE-PWGVRRFFVRDPFGKLVNILTH  111 (112)
T ss_pred             HHHHHHHHhcCCeEecCCccC-CCceEEEEEECCCCCEEEEEEc
Confidence            999999999999988765432 2445889999999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structure of this family is a that of a strand-swapped dimer.

>cd08349 BLMA_like Bleomycin binding protein (BLMA) and similar proteins; BLMA confers bleomycin (Bm) resistance by directly binding to Bm

Probab=99.68  E-value=2.5e-15  Score=106.10  Aligned_cols=110  Identities=22%  Similarity=0.292  Sum_probs=78.9

Q ss_pred             EEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeCCcEEEEeecCCCCCCCCCCCCCCCCccEEEEeeCCHHHHH
Q 029385           17 ISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQCENMAIVE   96 (194)
Q Consensus        17 v~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~~hiaf~v~dl~~~~   96 (194)
                      ..|.|+|++++++||+++|||+...+.+..  ...++...+..+++.......  +    ....+..|++|.|+|+++++
T Consensus         2 ~~i~v~d~~~s~~FY~~~lg~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~--~----~~~~~~~~~~~~~~~~~~~~   73 (112)
T cd08349           2 PVLPVSDIERSLAFYRDVLGFEVDWEHPEP--GYAFLSRGGAQLMLSEHDGDE--P----VPLGRGGSVYIEVEDVDALY   73 (112)
T ss_pred             CEEEECCHHHHHHHHHhccCeEEEEEcCCC--cEEEEEeCCEEEEEeccCCCC--C----CCCCCcEEEEEEeCCHHHHH
Confidence            368999999999999999999988776311  223333344455555433211  1    12346679999999999999


Q ss_pred             HHHHhCCCe-EEccceecCccceEEEEEeCCCCCEEEEEe
Q 029385           97 RRLKEMKID-YVKSRVEEGGINVDQLFFHDPDGSMIEICN  135 (194)
Q Consensus        97 ~~l~~~Gi~-~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~  135 (194)
                      +++++.|+. +..++.. ..++.+.+++.||||+.||+++
T Consensus        74 ~~l~~~G~~~~~~~~~~-~~~g~~~~~~~DP~G~~ie~~~  112 (112)
T cd08349          74 AELKAKGADLIVYPPED-QPWGMREFAVRDPDGNLLRFGE  112 (112)
T ss_pred             HHHHHcCCcceecCccC-CCcccEEEEEECCCCCEEEecC
Confidence            999999998 4544432 2334589999999999999975

BLMA also called Bleomycin resistance protein, confers Bm resistance by directly binding to Bm. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMA is produced by actinomycetes to protect themselves against their own lethal compound. BLMA has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMAs are dimers and each dimer binds to two Bm molecules at the Bm-binding pockets formed at the dimer interface; two Bm molecules are bound per dimer. BLMA belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. As for the large

>cd07246 Glo_EDI_BRP_like_8 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.67  E-value=4.7e-15  Score=106.28  Aligned_cols=116  Identities=17%  Similarity=0.072  Sum_probs=81.6

Q ss_pred             eEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcc--eEEEEeCCcEEEEeecCCCCCCCCCCCCCCCCccEEEEeeCCHH
Q 029385           16 HISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFD--GAWLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQCENMA   93 (194)
Q Consensus        16 hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~--~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~~hiaf~v~dl~   93 (194)
                      -+.|.|+|++++.+||+++||+++..+....+..  ...+...+..+.+.... +...  .......+..|++|.|+|++
T Consensus         4 ~~~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~-~~~~--~~~~~~~~~~~~~~~v~d~~   80 (122)
T cd07246           4 TPYLIVRDAAAAIDFYKKAFGAEELERMPDDDGRVMHAELRIGDSVLMLADEF-PEHG--SPASWGGTPVSLHLYVEDVD   80 (122)
T ss_pred             eEEEEECCHHHHHHHHHHhhCCEEEEEEeCCCCCEEEEEEEECCEEEEEecCC-cccC--CCCCCCCceEEEEEEeCCHH
Confidence            3678999999999999999999998765322111  12222334445444322 1111  11123456789999999999


Q ss_pred             HHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEe
Q 029385           94 IVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICN  135 (194)
Q Consensus        94 ~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~  135 (194)
                      ++++++.+.|+++..++... .++.+.++++||||+.|+|++
T Consensus        81 ~~~~~l~~~G~~~~~~~~~~-~~g~~~~~~~DP~G~~~~l~~  121 (122)
T cd07246          81 ATFARAVAAGATSVMPPADQ-FWGDRYGGVRDPFGHRWWIAT  121 (122)
T ss_pred             HHHHHHHHCCCeEecCcccc-cccceEEEEECCCCCEEEEec
Confidence            99999999999988776433 345589999999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd08350 BLMT_like BLMT, a bleomycin resistance protein encoded on the transposon Tn5, and similar proteins

Probab=99.66  E-value=4e-15  Score=107.26  Aligned_cols=107  Identities=16%  Similarity=0.253  Sum_probs=76.6

Q ss_pred             eEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeCCcEEEEeecCCCCCCCCCCCCCCCCccEEEEeeCCHHHH
Q 029385           16 HISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQCENMAIV   95 (194)
Q Consensus        16 hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~~hiaf~v~dl~~~   95 (194)
                      ...|.|+|++++++||++ |||+...+...   ...++...+..+++......        .......|++|.|+|++++
T Consensus         5 ~~~l~v~Dl~~s~~FY~~-lG~~~~~~~~~---~~~~~~~~~~~l~l~~~~~~--------~~~~~~~~~~~~v~dvd~~   72 (120)
T cd08350           5 IPNLPSRDLDATEAFYAR-LGFSVGYRQAA---GYMILRRGDLELHFFAHPDL--------DPATSPFGCCLRLPDVAAL   72 (120)
T ss_pred             cceeEcCCHHHHHHHHHH-cCCEEEecCCC---CEEEEEcCCEEEEEEecCcC--------CCCCCcceEEEEeCCHHHH
Confidence            578999999999999999 99998876631   11222234445666653311        1112346899999999999


Q ss_pred             HHHHHhCCCeEE-------ccceecCccceEEEEEeCCCCCEEEEEe
Q 029385           96 ERRLKEMKIDYV-------KSRVEEGGINVDQLFFHDPDGSMIEICN  135 (194)
Q Consensus        96 ~~~l~~~Gi~~~-------~~~~~~~g~~~~~~~~~DPDG~~iEi~~  135 (194)
                      +++|+++|+.+.       .++ ....++.+.++|+|||||.|||.+
T Consensus        73 ~~~l~~~G~~~~~~~~~~~~~~-~~~~~g~~~~~~~DPdG~~ie~~~  118 (120)
T cd08350          73 HAEFRAAGLPETGSGIPRITPP-EDQPWGMREFALVDPDGNLLRFGQ  118 (120)
T ss_pred             HHHHHHhCccccccCCCcccCC-cCCCCceeEEEEECCCCCEEEeec
Confidence            999999999853       121 111245689999999999999987

BLMT is a bleomycin (Bm) resistance protein, encoded by the ble gene on the transposon Tn5. This protein confers a survival advantage to Escherichia coli host cells. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMT has strong binding affinity to Bm and it protects against this lethal compound through drug sequestering. BLMT has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMT is a dimer with two Bm-binding pockets formed at the dimer interface.

>cd06587 Glo_EDI_BRP_like This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

Probab=99.65  E-value=4.4e-15  Score=103.12  Aligned_cols=112  Identities=28%  Similarity=0.442  Sum_probs=82.4

Q ss_pred             eEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeCCcEEEEeecCCCCCCCCCCCCCCCCccEEEEeeCCHHHH
Q 029385           16 HISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQCENMAIV   95 (194)
Q Consensus        16 hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~~hiaf~v~dl~~~   95 (194)
                      |+.+.|+|++++.+||+++||++.............++...+..+++.........     ....+..|++|.|+|++++
T Consensus         1 Hi~i~~~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~-----~~~~~~~~~~~~v~~~~~~   75 (112)
T cd06587           1 HVGLTVSDLEAAVAFYEEVLGFEVLFRNGNGGAEFAVLGLGGTRLELFEGDEPAPA-----PSGGGGVHLAFEVDDVDAA   75 (112)
T ss_pred             CcceeeCCHHHHHHHHHhccCCEEEEeeccCCEEEEEEecCCceEEEecCCCCCCc-----ccCCCeeEEEEECCCHHHH
Confidence            89999999999999999999999888874211122222223456666665432211     2345788999999999999


Q ss_pred             HHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEE
Q 029385           96 ERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEI  133 (194)
Q Consensus        96 ~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi  133 (194)
                      ++++.+.|+.+...+.. ...+.+.+++.||+|+.||+
T Consensus        76 ~~~l~~~g~~~~~~~~~-~~~~~~~~~~~Dp~G~~~~~  112 (112)
T cd06587          76 YERLKAAGVEVLGEPRE-EPWGGRVAYFRDPDGNLIEL  112 (112)
T ss_pred             HHHHHHcCCcccCCCcC-CCCCcEEEEEECCCCcEEeC
Confidence            99999999988876531 22234999999999999986

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain clas

>cd08356 Glo_EDI_BRP_like_17 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.65  E-value=4.3e-15  Score=106.46  Aligned_cols=106  Identities=15%  Similarity=0.156  Sum_probs=74.8

Q ss_pred             eEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeCCcEEEEeecCCCCCCCCCCCCCCCCccEEEEeeCCHHHH
Q 029385           16 HISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQCENMAIV   95 (194)
Q Consensus        16 hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~~hiaf~v~dl~~~   95 (194)
                      -..|.|+|++++++||++ |||++..+.+    ..+++...+..+.+......         ......+++|.|+|++++
T Consensus         4 ~~~l~v~Dl~~s~~FY~~-LGf~~~~~~~----~~~~l~~~~~~l~l~~~~~~---------~~~~~~~~~~~v~did~~   69 (113)
T cd08356           4 RPFIPAKDFAESKQFYQA-LGFELEWEND----NLAYFRLGNCAFYLQDYYVK---------DWAENSMLHLEVDDLEAY   69 (113)
T ss_pred             eeccccccHHHHHHHHHH-hCCeeEecCC----CEEEEEcCCEEEEeecCCCc---------ccccCCEEEEEECCHHHH
Confidence            357889999999999988 9999988753    33444444444544322111         112346899999999999


Q ss_pred             HHHHHhCCCeEEccc----eecCccceEEEEEeCCCCCEEEEEe
Q 029385           96 ERRLKEMKIDYVKSR----VEEGGINVDQLFFHDPDGSMIEICN  135 (194)
Q Consensus        96 ~~~l~~~Gi~~~~~~----~~~~g~~~~~~~~~DPDG~~iEi~~  135 (194)
                      +++|+++|+++..+.    .....++.+.++|+|||||.|+|.+
T Consensus        70 ~~~l~~~G~~~~~~~~~~~~~~~~~g~r~f~~~DPdGn~~~~~~  113 (113)
T cd08356          70 YEHIKALGLPKKFPGVKLPPITQPWWGREFFLHDPSGVLWHIGQ  113 (113)
T ss_pred             HHHHHHcCCcccccceecCccccCCCcEEEEEECCCccEEEeeC
Confidence            999999998753211    1122345699999999999999864

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>TIGR03211 catechol_2_3 catechol 2,3 dioxygenase

Probab=99.65  E-value=4.7e-15  Score=123.38  Aligned_cols=114  Identities=22%  Similarity=0.337  Sum_probs=82.9

Q ss_pred             cceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeCC--cEEEEeecCCCCCCCCCCCCCCCCccEEEEe
Q 029385           11 LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYG--MGIHLLKSEEPDNLPKAGKNINPKDNHISFQ   88 (194)
Q Consensus        11 i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~g--~~~~l~~~~~~~~~~~~~~~~~~g~~hiaf~   88 (194)
                      +++|+||.|.|+|++++.+||+++|||++..+.+    ...++...+  ....+....          ....+..|++|.
T Consensus         2 i~~i~Hi~l~V~Dle~s~~FY~~~LG~~~~~~~~----~~~~~~~~~~~~~~~~~l~~----------~~~~g~~hiaf~   67 (303)
T TIGR03211         2 VMRLGHVELRVLDLEESLKHYTDVLGLEETGRDG----QRVYLKAWDEWDHYSVILTE----------ADTAGLDHMAFK   67 (303)
T ss_pred             cceeeEEEEEeCCHHHHHHHHHHhcCCEEeeecC----ceEEEEeccccccceEeecc----------CCCCceeEEEEE
Confidence            6789999999999999999999999999887653    233332221  111111111          123468899999


Q ss_pred             eC---CHHHHHHHHHhCCCeEEccce-ecCccceEEEEEeCCCCCEEEEEecCCC
Q 029385           89 CE---NMAIVERRLKEMKIDYVKSRV-EEGGINVDQLFFHDPDGSMIEICNCDVL  139 (194)
Q Consensus        89 v~---dl~~~~~~l~~~Gi~~~~~~~-~~~g~~~~~~~~~DPDG~~iEi~~~~~~  139 (194)
                      |+   ++++++++|++.|+++...+. ...+. .+.+||+||||+.|||++....
T Consensus        68 v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~-g~~~~~~DPdG~~iEl~~~~~~  121 (303)
T TIGR03211        68 VESEADLERLVKRLEAYGVGTGWIPAGELPGV-GRRVRFTLPSGHTMELYAEKEY  121 (303)
T ss_pred             eCCHHHHHHHHHHHHHcCCCeeeccCCCCCCc-ceEEEEECCCCCEEEEEEcccc
Confidence            98   799999999999999875442 11222 3789999999999999986543

Members of this family all are enzymes active as catechol 2,3 dioxygenase (1.13.11.2), although some members have highly significant activity on catechol derivatives such as 3-methylcatechol, 3-chlorocatechol, and 4-chlorocatechol (see Mars, et al.). This enzyme is also called metapyrocatechase, as it performs a meta-cleavage (an extradiol ring cleavage), in contrast to the ortho-cleavage (intradiol ring cleavage)performed by catechol 1,2-dioxygenase (EC 1.13.11.1), also called pyrocatechase.

>TIGR02295 HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase

Probab=99.64  E-value=5.9e-15  Score=122.14  Aligned_cols=120  Identities=24%  Similarity=0.398  Sum_probs=80.7

Q ss_pred             CcccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcc--eEEEEeCCcEEEEeecCCCCCCCCCCCCCCCCccEE
Q 029385            8 PLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFD--GAWLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHI   85 (194)
Q Consensus         8 ~~~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~--~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~~hi   85 (194)
                      .+.+++|+||+|.|+|++++.+||+++|||++..+.......  ..|+...+ ..+.+...        . ..+++.+|+
T Consensus       131 ~~~~~~i~Hv~l~v~dl~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--------~-~~~~~~~Hi  200 (294)
T TIGR02295       131 GVSPVRLDHFNVFVPDVQRALRFYKEELGFRVTEYTEDDEGNLAAAWLHRKG-GVHDIALT--------N-GNGPRLHHI  200 (294)
T ss_pred             CccceeeeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCcEEEEEEecCC-CcCceEee--------c-CCCCceeeE
Confidence            357889999999999999999999999999987653211111  22322111 11111110        0 223688999


Q ss_pred             EEeeCC---HHHHHHHHHhCCCe--EEccceecCccceEEEEEeCCCCCEEEEEecC
Q 029385           86 SFQCEN---MAIVERRLKEMKID--YVKSRVEEGGINVDQLFFHDPDGSMIEICNCD  137 (194)
Q Consensus        86 af~v~d---l~~~~~~l~~~Gi~--~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~  137 (194)
                      ||.|+|   ++++.++|++.|++  +...+...+......+|++||+||.||+++..
T Consensus       201 af~v~d~~~v~~~~~~l~~~G~~~~~~~~p~~~~~~~~~~~y~~DP~G~~iEl~~~~  257 (294)
T TIGR02295       201 AYWVHDPLNIIKACDILASAGLSDSIERGPGRHGVSNAFFLYLRDPDGHRIELYTGD  257 (294)
T ss_pred             EEEcCCHHHHHHHHHHHHhCCCCcccccCCccCCCCcceEEEEECCCCCEEEEEecc
Confidence            999997   55678999999987  44433222211236799999999999999754

The enzyme from Bacillus brevis contains manganese.

>cd07251 Glo_EDI_BRP_like_10 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.63  E-value=1.1e-14  Score=104.12  Aligned_cols=115  Identities=21%  Similarity=0.223  Sum_probs=78.3

Q ss_pred             EEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeCCcEEEEeecCCCCCCCCCC-CCCCCCccEEEEee---CCH
Q 029385           17 ISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNLPKAG-KNINPKDNHISFQC---ENM   92 (194)
Q Consensus        17 v~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~-~~~~~g~~hiaf~v---~dl   92 (194)
                      |.|.|+|++++.+||+++|||++..+.. .  ...++...+..+++............. .....+..|++|.+   +|+
T Consensus         2 i~l~v~d~~~a~~FY~~~lg~~~~~~~~-~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~   78 (121)
T cd07251           2 ITLGVADLARSRAFYEALLGWKPSADSN-D--GVAFFQLGGLVLALFPREELAKDAGVPVPPPGFSGITLAHNVRSEEEV   78 (121)
T ss_pred             eeEeeCCHHHHHHHHHHhcCceecccCC-C--ceEEEEcCCeEEEEecchhhhhhcCCCCCCCCccceEEEEEcCCHHHH
Confidence            7899999999999999999999887722 1  233333344455555432211111111 02233455677765   589


Q ss_pred             HHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEe
Q 029385           93 AIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICN  135 (194)
Q Consensus        93 ~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~  135 (194)
                      +++++++.+.|+++..++... .++.+.++++|||||+|||+.
T Consensus        79 ~~~~~~l~~~G~~~~~~~~~~-~~g~~~~~~~DP~Gn~iei~~  120 (121)
T cd07251          79 DAVLARAAAAGATIVKPPQDV-FWGGYSGYFADPDGHLWEVAH  120 (121)
T ss_pred             HHHHHHHHhCCCEEecCCccC-CCCceEEEEECCCCCEEEEee
Confidence            999999999999988765332 334589999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>TIGR03213 23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase

Probab=99.63  E-value=6.5e-15  Score=121.71  Aligned_cols=113  Identities=15%  Similarity=0.210  Sum_probs=81.6

Q ss_pred             cceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceE-EEEeCCcEEEEeecCCCCCCCCCCCCCCCCccEEEEee
Q 029385           11 LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGA-WLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQC   89 (194)
Q Consensus        11 i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~-~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~~hiaf~v   89 (194)
                      |.+|+|+.|.|+|++++.+||+++|||+...+.+    .+. |+...+....+.....+          ..+..|++|.|
T Consensus         1 ~~~i~~v~l~V~Dl~~s~~FY~~~LGl~~~~~~~----~~~~~~~~~~~~~~~~l~~~~----------~~~~~~~~f~V   66 (286)
T TIGR03213         1 VRGLGYLGIGVSDVDAWREFATEVLGMMVASEGE----NDALYLRLDSRAHRIAVHPGE----------SDDLAYAGWEV   66 (286)
T ss_pred             CceeeEEEEEeCCHHHHHHHHHhccCcccccCCC----CceEEEEcCCCceEEEEEECC----------cCCeeeEeeee
Confidence            5789999999999999999999999999876543    233 32322223333222211          13567999999


Q ss_pred             CC---HHHHHHHHHhCCCeEEcccee--cCccceEEEEEeCCCCCEEEEEecC
Q 029385           90 EN---MAIVERRLKEMKIDYVKSRVE--EGGINVDQLFFHDPDGSMIEICNCD  137 (194)
Q Consensus        90 ~d---l~~~~~~l~~~Gi~~~~~~~~--~~g~~~~~~~~~DPDG~~iEi~~~~  137 (194)
                      ++   ++++.++|++.|+++...+..  ......+.+||.|||||.||++...
T Consensus        67 ~~~~~l~~~~~~L~~~Gv~~~~~~~~~~~~~~~~~~~~f~DPdGn~lEl~~~~  119 (286)
T TIGR03213        67 ADEAGLDQVKEKLEKAGVAVTVASAAEARERGVLGLIKFTDPGGNPLEIYYGA  119 (286)
T ss_pred             CCHHHHHHHHHHHHHcCCceEECCHHHhhhccceEEEEEECCCCCEEEEEEcc
Confidence            97   899999999999998764421  1112347899999999999999743

Members of this protein family all have activity as 2,3-dihydroxybiphenyl 1,2-dioxygenase, the third enzyme of a pathway for biphenyl degradation. Many of the extradiol ring-cleaving dioxygenases, to which these proteins belong, act on a range of related substrates. Note that some members of this family may be found operons for toluene or naphthalene degradation, where other activities of the same enzyme may be more significant; the trusted cutoff for this model is set relatively high to exclude most such instances.

>TIGR03213 23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase

Probab=99.62  E-value=1.3e-14  Score=119.88  Aligned_cols=117  Identities=19%  Similarity=0.187  Sum_probs=79.7

Q ss_pred             cceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCC--C---CcceEEEEeCCcEEEEeecCCCCCCCCCCCCCCCCccEE
Q 029385           11 LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGS--F---DFDGAWLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHI   85 (194)
Q Consensus        11 i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~--~---~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~~hi   85 (194)
                      +.+|+||.|.|+|++++.+||+++|||++..+...  .   .+...|+...+....+.....         ...++.+|+
T Consensus       140 ~~~l~Hv~l~v~Dle~s~~FY~~~LGf~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~l~~~---------~~~~~~~Hi  210 (286)
T TIGR03213       140 DQGLGHIVLRVPDVDAALAFYTEVLGFQLSDVIDLPAGPGVTVRPYFLHCNERHHSLAFAAG---------PSEKRLNHL  210 (286)
T ss_pred             CccccEEEEEcCCHHHHHHHHHHccCCeEEEeEcccCCCCCcceEEEEEECCCcceEEEecC---------CCCCceEEE
Confidence            56899999999999999999999999998665211  1   011334333221111211110         124578999


Q ss_pred             EEeeCCHHH---HHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEecC
Q 029385           86 SFQCENMAI---VERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD  137 (194)
Q Consensus        86 af~v~dl~~---~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~  137 (194)
                      ||.|+|+++   ++++|++.|+ ....+...+..+...+|++||||+.||+.+..
T Consensus       211 af~v~d~~~v~~~~~~l~~~G~-~~~~~~r~~~~~~~~~y~~DP~G~~iE~~~~~  264 (286)
T TIGR03213       211 MLEVDTLDDVGLALDRVDADGI-VASTLGRHTNDHMVSFYVATPSGWLVEYGWGA  264 (286)
T ss_pred             EEEcCCHHHHHHHHHHHHHCCC-EEecCCcCCCCCeEEEEEECCCCcEEEeecCc
Confidence            999997666   7999999999 44333222223458899999999999998753

Members of this protein family all have activity as 2,3-dihydroxybiphenyl 1,2-dioxygenase, the third enzyme of a pathway for biphenyl degradation. Many of the extradiol ring-cleaving dioxygenases, to which these proteins belong, act on a range of related substrates. Note that some members of this family may be found operons for toluene or naphthalene degradation, where other activities of the same enzyme may be more significant; the trusted cutoff for this model is set relatively high to exclude most such instances.

>TIGR02295 HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase

Probab=99.62  E-value=1.1e-14  Score=120.60  Aligned_cols=110  Identities=18%  Similarity=0.216  Sum_probs=82.1

Q ss_pred             cceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeCC-c-EEEEeecCCCCCCCCCCCCCCCCccEEEEe
Q 029385           11 LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYG-M-GIHLLKSEEPDNLPKAGKNINPKDNHISFQ   88 (194)
Q Consensus        11 i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~g-~-~~~l~~~~~~~~~~~~~~~~~~g~~hiaf~   88 (194)
                      |.+|+||.|.|+|++++++||+++|||++..+.+    ...|+...+ . ...+....          ....+..|++|.
T Consensus         2 i~~i~hv~l~v~Dl~~s~~FY~~vLGl~~~~~~~----~~~~~~~~~~~~~~~l~l~~----------~~~~~~~hiaf~   67 (294)
T TIGR02295         2 ILRTGHVELRVTDLDKSREFYVDLLGFRETESDK----EYIYLRGIEEFQHHSLVLTK----------APSAALSYIGFR   67 (294)
T ss_pred             CceeeEEEEEeCCHHHHHHHHHHccCCEEEEecC----CeEEEeccCcCCceEEEeee----------CCCcCccEEEEE
Confidence            6789999999999999999999999999887653    334443221 1 11122111          112467899999


Q ss_pred             eC---CHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEecC
Q 029385           89 CE---NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD  137 (194)
Q Consensus        89 v~---dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~  137 (194)
                      |+   |+++++++|++.|+++...+.  . ...+.+||+|||||.|||+...
T Consensus        68 v~~~~dl~~~~~~l~~~Gv~v~~~~~--~-~~~~~~~~~DPdG~~iEl~~~~  116 (294)
T TIGR02295        68 VSKEEDLDKAADFFQKLGHPVRLVRD--G-GQPEALRVEDPFGYPIEFYFEM  116 (294)
T ss_pred             eCCHHHHHHHHHHHHhcCCcEEeecC--C-CCceEEEEECCCCCEEEEEEch
Confidence            97   899999999999999876442  1 2238999999999999999854

The enzyme from Bacillus brevis contains manganese.

>cd08358 Glo_EDI_BRP_like_21 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.62  E-value=2.7e-14  Score=104.71  Aligned_cols=108  Identities=14%  Similarity=0.260  Sum_probs=72.8

Q ss_pred             eeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCC---------cceEE---EEeC---C--cEEEEeecCCCCCCCCCC
Q 029385           13 SLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFD---------FDGAW---LFNY---G--MGIHLLKSEEPDNLPKAG   75 (194)
Q Consensus        13 ~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~---------~~~~~---~~~~---g--~~~~l~~~~~~~~~~~~~   75 (194)
                      ++.|+.|.|+|+++|++||+++|||++..+....+         +++.|   .+..   .  ..++|.......  + . 
T Consensus         2 ~~~Hv~irV~DlerSi~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~lEL~~n~~~~--~-~-   77 (127)
T cd08358           2 RALHFVFKVGNRNKTIKFYREVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMIGYGPEDDHFVVELTYNYGIG--D-Y-   77 (127)
T ss_pred             ceEEEEEEeCCHHHHHHHHHHhcCCEEEeeecCccccccccccCCCCcEEEEEEecCCCCCccEEEeEecCCCC--C-C-
Confidence            57899999999999999999999999877653221         11222   1222   1  234455432211  1 1 


Q ss_pred             CCCCCCccEEEEeeCCHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEe
Q 029385           76 KNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICN  135 (194)
Q Consensus        76 ~~~~~g~~hiaf~v~dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~  135 (194)
                       ..  |..|++|.|++. ++.++|+++|+++...+.       ..+|+.||||+.|||..
T Consensus        78 -~~--g~~~~hlav~~~-d~~~~l~~~Gv~~~~~~~-------~~~fi~DPDG~~ie~~~  126 (127)
T cd08358          78 -EL--GNDFLGITIHSK-QAVSNAKKHNWPVTEVED-------GVYEVKAPGGYKFYLID  126 (127)
T ss_pred             -CC--CCCEEEEEEECH-HHHHHHHHCCCceecCCC-------CEEEEECCCCCEEEEec
Confidence             11  123677777776 566999999999886442       27899999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>PLN02300 lactoylglutathione lyase

Probab=99.49  E-value=7.5e-13  Score=109.60  Aligned_cols=123  Identities=15%  Similarity=0.154  Sum_probs=87.0

Q ss_pred             ccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCC--CCcceEEEEeCC----cEEEEeecCCCCCCCCCCCCCCCCcc
Q 029385           10 CLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGS--FDFDGAWLFNYG----MGIHLLKSEEPDNLPKAGKNINPKDN   83 (194)
Q Consensus        10 ~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~--~~~~~~~~~~~g----~~~~l~~~~~~~~~~~~~~~~~~g~~   83 (194)
                      ....+.|+.|.|+|++++.+||+++|||+...+...  ..+...++-..+    ..+++.....   . ... ..+++..
T Consensus       151 ~~~~~~~~~l~~~d~~~a~~Fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~---~-~~~-~~g~~~~  225 (286)
T PLN02300        151 TPEPLCQVMLRVGDLDRSIKFYEKAFGMKLLRKRDNPEYKYTIAMMGYGPEDKTTVLELTYNYG---V-TEY-TKGNAYA  225 (286)
T ss_pred             CCCcceeEEEEeCCHHHHHHHHHhccCCEEEeeecccccceEEEEEecCCCCCccEEEEeecCC---C-Ccc-ccCCcee
Confidence            356788999999999999999999999998764321  112223221111    1233322111   1 011 2246778


Q ss_pred             EEEEeeCCHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEecC
Q 029385           84 HISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD  137 (194)
Q Consensus        84 hiaf~v~dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~  137 (194)
                      |++|.|+|++++++++.++|+.+..++...++.+.+.++|+||||+.++|++..
T Consensus       226 ~i~~~v~di~~~~~~~~~~G~~v~~~p~~~p~~~~~~~~~~DPdG~~i~~~~~~  279 (286)
T PLN02300        226 QIAIGTDDVYKTAEAIKLVGGKITREPGPLPGINTKITACLDPDGWKTVFVDNI  279 (286)
T ss_pred             EEEEecCCHHHHHHHHHHcCCeEecCCccCCCCceEEEEEECCCCCEEEEEccc
Confidence            999999999999999999999999876555554447899999999999999764

>KOG2944 consensus Glyoxalase [Carbohydrate transport and metabolism]

Probab=99.49  E-value=7.2e-13  Score=98.33  Aligned_cols=124  Identities=24%  Similarity=0.303  Sum_probs=87.9

Q ss_pred             cceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCC---------------------CCCcceEEEEeCCcEEEEeecCCCC
Q 029385           11 LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPG---------------------SFDFDGAWLFNYGMGIHLLKSEEPD   69 (194)
Q Consensus        11 i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~---------------------~~~~~~~~~~~~g~~~~l~~~~~~~   69 (194)
                      .-.+.|..+.+.|+.++..||+.++|+.+..+..                     .....+.|+......+++.....++
T Consensus        20 t~~~~~t~~rvkd~~~Sl~fytr~~gm~l~~~~~fke~~Fsl~fL~~~~~~~vP~~~~~~~v~~~~~~~~~ELthn~Gte   99 (170)
T KOG2944|consen   20 TYLLQQTMLRVKDPTGSLKFYTRVNGMALLVPDDFKEAKFSLYFLGAEVSEDVPKPEHGVSVFVFSRNAKLELTHNWGTE   99 (170)
T ss_pred             hhhhhhceeecccchhhhhhhhhhccceeechhhhhHhhhHHHhhcccccccCccCCCCCceEEecccCceeeecCCCCC
Confidence            3345677777777777777777777776655421                     1111236666666678888777666


Q ss_pred             CCCCCC---CCCCC-CccEEEEeeCCHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEec
Q 029385           70 NLPKAG---KNINP-KDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC  136 (194)
Q Consensus        70 ~~~~~~---~~~~~-g~~hiaf~v~dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~  136 (194)
                      +.+...   +...+ |.+||||.|+|+..+..+|++.||++...+.  .|.....+|+.||||+.|||...
T Consensus       100 s~~~~~~~ngN~~prGfgHIci~V~di~sac~~lkekGV~f~Kk~~--dGk~K~iaF~~dpDgywiei~~~  168 (170)
T KOG2944|consen  100 SPPDQAYLNGNKEPRGFGHICIEVDDINSACERLKEKGVRFKKKLK--DGKMKPIAFLHDPDGYWIEIELE  168 (170)
T ss_pred             CCcchhhcCCCCCCCccceEEEEeCCHHHHHHHHHHhCceeeecCC--CccccceeEEECCCCCeEEEeec
Confidence            655222   34445 8999999999999999999999999776552  23224789999999999999864

>PF13669 Glyoxalase_4: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; PDB: 3RMU_B 3ISQ_A 1JC5_D 1JC4_D 3HDP_A 2QH0_A 3GM5_A 3OA4_A 3CT8_A

Probab=99.43  E-value=7.6e-13  Score=94.18  Aligned_cols=95  Identities=22%  Similarity=0.353  Sum_probs=71.7

Q ss_pred             eeEEEEcCCHHHHHHHHHHccCCeEeeeCCC--CCcceEEEEeCC--cEEEEeecCCCCCCCCCCCCCCCCccEEEEeeC
Q 029385           15 NHISLVCRSVEASLDFYQNVLGFFPIRRPGS--FDFDGAWLFNYG--MGIHLLKSEEPDNLPKAGKNINPKDNHISFQCE   90 (194)
Q Consensus        15 ~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~--~~~~~~~~~~~g--~~~~l~~~~~~~~~~~~~~~~~~g~~hiaf~v~   90 (194)
                      +||+|.|+|++++++||+++||+....+...  ......++...+  ..++|++...+.+...   ....|++||||.|+
T Consensus         1 dHv~i~V~Dl~~a~~~~~~~lG~~~~~~~~~~~~~v~~~~~~~~~~~~~iELi~p~~~~~~~~---~~~~gi~Hia~~v~   77 (109)
T PF13669_consen    1 DHVGIVVPDLDAAAAFYCDVLGFEPWERYRDEPQGVRVAFLYLGDGPVQIELIQPLDGDSPLD---RGGGGIHHIAFEVD   77 (109)
T ss_dssp             EEEEEEES-HHHHHHHHHHCTTHEEEEEEEEGCTTEEEEEEEETTETEEEEEEEESSTTCHHH---HTSSEEEEEEEEES
T ss_pred             CEEEEEcCCHHHHHHHHHHhhCCcEEEEEecCCCCEEEEEEEeCCCcEEEEEEEeCCCCcccc---cCCCCEEEEEEEeC
Confidence            6999999999999999999999987655321  222344554444  5789998776542111   35679999999999


Q ss_pred             CHHHHHHHHHhCCCeEEcccee
Q 029385           91 NMAIVERRLKEMKIDYVKSRVE  112 (194)
Q Consensus        91 dl~~~~~~l~~~Gi~~~~~~~~  112 (194)
                      |+++..++|++.|+++......
T Consensus        78 D~d~~~~~l~~~G~~~~~~~~~   99 (109)
T PF13669_consen   78 DLDAAIARLEAQGFRVLDEGPR   99 (109)
T ss_dssp             HHHHHHHHHHHTTECEEECEEE
T ss_pred             CHHHHHHHHHHCCCEEcccCcc
Confidence            9999999999999998876533

>COG3324 Predicted enzyme related to lactoylglutathione lyase [General function prediction only]

Probab=99.38  E-value=2.5e-11  Score=88.29  Aligned_cols=117  Identities=16%  Similarity=0.145  Sum_probs=83.4

Q ss_pred             cceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeCC--cEEEEeecCCCCCCCCCCCCCCCCccEEEEe
Q 029385           11 LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYG--MGIHLLKSEEPDNLPKAGKNINPKDNHISFQ   88 (194)
Q Consensus        11 i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~g--~~~~l~~~~~~~~~~~~~~~~~~g~~hiaf~   88 (194)
                      ...+.|..|.++|++++.+||+++||++.....+..+.....+...+  .+=-+....      ..  ....+...+.|.
T Consensus         7 ~~~i~w~Ei~~~D~~ra~~FY~~vFgW~~~~~~~~~~~~y~~f~~~~~~~gG~l~~~~------~~--~p~~~~~~iy~~   78 (127)
T COG3324           7 KGTIVWFELPVSDLERAKAFYEKVFGWTFEDYFDMGEMRYAVFPADGAGAGGGLMARP------GS--PPGGGGWVIYFA   78 (127)
T ss_pred             CCccEEEeeecCCHHHHHHHHHHhhCceecccccCCCceEEEEECCCccccceeccCC------cC--CCCCCCEEEEEe
Confidence            45677999999999999999999999998776432111212211111  111111110      00  112566789999


Q ss_pred             eCCHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEec
Q 029385           89 CENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC  136 (194)
Q Consensus        89 v~dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~  136 (194)
                      |+|+++..++..++|-.++.++.+-++. .+.+.+.||+||.|-|.+.
T Consensus        79 v~did~~l~rv~~~GG~V~~p~~~~p~~-G~~a~~~Dp~Gn~~~l~s~  125 (127)
T COG3324          79 VDDIDATLERVVAAGGKVLRPKTEFPGG-GRIAHFVDPEGNRFGLWSP  125 (127)
T ss_pred             cCChHHHHHHHHhcCCeEEecccccCCc-eEEEEEECCCCCEEEEeec
Confidence            9999999999999999999988766653 4999999999999999864

>COG3565 Predicted dioxygenase of extradiol dioxygenase family [General function prediction only]

Probab=99.33  E-value=3.7e-11  Score=84.70  Aligned_cols=119  Identities=20%  Similarity=0.310  Sum_probs=80.7

Q ss_pred             eeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEE--EeCCcEEEEeecCCCCCCC-CCCCCCCCCccE--EEEe
Q 029385           14 LNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWL--FNYGMGIHLLKSEEPDNLP-KAGKNINPKDNH--ISFQ   88 (194)
Q Consensus        14 i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~--~~~g~~~~l~~~~~~~~~~-~~~~~~~~g~~h--iaf~   88 (194)
                      +-|+++.|+|++++.+||.++||++.-+..+      .|+  --+|.++..-....+++.. +.-.....-..|  +.+.
T Consensus         5 ~FHLA~pV~Dl~~tr~FYgevlG~~~GRstd------~wvdfDfyGHQ~v~Hl~~q~~~~~~g~V~~~~v~~pHfGvVl~   78 (138)
T COG3565           5 PFHLAIPVNDLDETRRFYGEVLGCKEGRSTD------TWVDFDFYGHQVVAHLTPQPDSQGSGKVDGHGVPPPHFGVVLP   78 (138)
T ss_pred             ceEEeeeccccHHHHhhhhhhcccccccccc------eEEEeeecccEEEEEecCCcccccCcccCCCCCCCccceEEEE
Confidence            4699999999999999999999999777653      444  2244443333222222211 111122222334  4556


Q ss_pred             eCCHHHHHHHHHhCCCeEEccceec-Cc--cceEEEEEeCCCCCEEEEEecCC
Q 029385           89 CENMAIVERRLKEMKIDYVKSRVEE-GG--INVDQLFFHDPDGSMIEICNCDV  138 (194)
Q Consensus        89 v~dl~~~~~~l~~~Gi~~~~~~~~~-~g--~~~~~~~~~DPDG~~iEi~~~~~  138 (194)
                      ++|.-++.++|+++|+....++..+ .|  ..++.+|+.||.||.+|+-..+.
T Consensus        79 ~edW~alaerlea~gi~~~i~P~vRF~Ge~gEq~TlFl~DP~gN~lEfK~fR~  131 (138)
T COG3565          79 VEDWFALAERLEAAGIPFHIPPKVRFKGEPGEQRTLFLFDPSGNALEFKGFRD  131 (138)
T ss_pred             HHHHHHHHHHHHHcCCCcccCceEEecCCccceEEEEEECCCCCeeeeecccc
Confidence            6799999999999999988776532 11  24699999999999999987764

>COG3607 Predicted lactoylglutathione lyase [General function prediction only]

Probab=99.26  E-value=8.1e-11  Score=84.19  Aligned_cols=119  Identities=20%  Similarity=0.217  Sum_probs=83.7

Q ss_pred             eeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeCCcEEEEeecCCCCCCCCCC--CCCCCCccEEEEeeC--
Q 029385           15 NHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNLPKAG--KNINPKDNHISFQCE--   90 (194)
Q Consensus        15 ~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~--~~~~~g~~hiaf~v~--   90 (194)
                      ..|+|+|+|++++.+||+. |||+.-...... .....+....+...|++...-.+.....  ....+.-.-||+.+.  
T Consensus         5 IFvNLPVkDL~~S~~Fy~a-lGfk~Npq~sde-~a~~mi~~~ni~vMLL~~~~fq~F~~~~i~dt~~s~evli~ls~~s~   82 (133)
T COG3607           5 IFVNLPVKDLEASKAFYTA-LGFKFNPQFSDE-DAACMIISDNIFVMLLEEARFQTFTKRQIADTTKSREVLISLSAGSR   82 (133)
T ss_pred             EEEecchhhHHHHHHHHHH-hCcccCCCcccc-cceeEEEeccEEEEEeccHHhhhhcccccccccCCceEEEEeccCcH
Confidence            4799999999999999986 999987765422 1233444555666666544322221111  123344556788877  


Q ss_pred             -CHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEecC
Q 029385           91 -NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD  137 (194)
Q Consensus        91 -dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~  137 (194)
                       +++++.+++.+.|.+...++...+.+  +..-|.||||+.||+..+.
T Consensus        83 eevd~~v~ka~eaGGk~~~~~~d~gfM--Yg~~fqDpDGh~wE~l~m~  128 (133)
T COG3607          83 EEVDELVDKALEAGGKPANEPQDEGFM--YGRSFQDPDGHVWEFLWMD  128 (133)
T ss_pred             HHHHHHHHHHHHcCCCCCCCccccccc--cceeeeCCCCCeEEEEEeC
Confidence             78999999999999987776555544  6778999999999999875

>COG0346 GloA Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]

Probab=99.18  E-value=1.2e-10  Score=82.86  Aligned_cols=121  Identities=23%  Similarity=0.311  Sum_probs=74.4

Q ss_pred             ceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcce--EEE-EeCCc--EEEEeecC------CCCCCCCCCCCCC-
Q 029385           12 KSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDG--AWL-FNYGM--GIHLLKSE------EPDNLPKAGKNIN-   79 (194)
Q Consensus        12 ~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~--~~~-~~~g~--~~~l~~~~------~~~~~~~~~~~~~-   79 (194)
                      ++++||.|.|+|++++.+||+++|||+...+........  ... .....  ........      ............. 
T Consensus         1 ~~l~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (138)
T COG0346           1 MGIHHVTLAVPDLEASIDFYTDVLGLRLVKDTVNEADDGGGYHLLFLDGDGGPGELLAFFGFEGRAGTGFVGDVALGVPG   80 (138)
T ss_pred             CceEEEEEeeCCHhHhHHHHHhhcCCeeeeecccccCCceEEEEEeccCCCCcccceeecccccccccccccceEEeecC
Confidence            468899999999999999999999999998865322211  111 11110  00110000      0000000000111 


Q ss_pred             --CCccEEEEeeCC---HHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEe
Q 029385           80 --PKDNHISFQCEN---MAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICN  135 (194)
Q Consensus        80 --~g~~hiaf~v~d---l~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~  135 (194)
                        .+..|++|.+++   .......+...|..+..... .. .+ ..+||+||||+.|||++
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~-~~-~~-~~~~~~dp~g~~~e~~~  138 (138)
T COG0346          81 GDLGLGHLAFEVDDEAFGDAALAFLDPDGVRIELGEP-GR-GG-VHVYFRDPDGILIELAT  138 (138)
T ss_pred             chhccCceeEecccccccceEEEeeCCCCCEEEeecC-CC-cc-eEEEEECCCCcEEEeeC
Confidence              357899999997   66777777778888765432 11 11 38999999999999973

>cd07250 HPPD_C_like C-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HppD) and hydroxymandelate Synthase (HmaS)

Probab=99.17  E-value=2.9e-10  Score=89.03  Aligned_cols=127  Identities=17%  Similarity=0.223  Sum_probs=82.8

Q ss_pred             cceeeeEEEEcC--CHHHHHHHHHHccCCeEeeeCCCCC-cce---EEEEeC--CcEEEEeecCCCCCCC--C--CCCCC
Q 029385           11 LKSLNHISLVCR--SVEASLDFYQNVLGFFPIRRPGSFD-FDG---AWLFNY--GMGIHLLKSEEPDNLP--K--AGKNI   78 (194)
Q Consensus        11 i~~i~hv~l~v~--Dle~s~~FY~~vLG~~~~~~~~~~~-~~~---~~~~~~--g~~~~l~~~~~~~~~~--~--~~~~~   78 (194)
                      +++|+||++.|+  |++++++||+++|||+...+....+ ..+   ..+...  +..+.|.+...+....  .  .....
T Consensus         1 ~~~iDHv~i~V~~~dl~~a~~fY~~~LGf~~~~~~~~~~~~~~~~s~~l~~~~g~i~l~L~~~~~~~~~s~~~~fl~~~~   80 (191)
T cd07250           1 LTRIDHVVGNVPDGEMDSWVDFYRKVLGFHRFWSFDIEDPYSGLRSRVLASPDGKIRIPLNEPASGKRKSQIQEFLEYYG   80 (191)
T ss_pred             CceeeEEEeecChhHHHHHHHHHHHhhCCceeeEEccCcCcccEEEEEEECCCCcEEEEEecCCCCCCccHHHHHHHHhC
Confidence            468999999999  9999999999999999877653211 111   222222  2445565544321100  0  00123


Q ss_pred             CCCccEEEEeeCCHHHHHHHHHhCCCeEEccceecC-------c-----------cceEEEEEeCCCCCEEEEEecC
Q 029385           79 NPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEG-------G-----------INVDQLFFHDPDGSMIEICNCD  137 (194)
Q Consensus        79 ~~g~~hiaf~v~dl~~~~~~l~~~Gi~~~~~~~~~~-------g-----------~~~~~~~~~DPDG~~iEi~~~~  137 (194)
                      ++|..||||.|+|+++++++|+++|+++...+....       +           .....++-+|..|.++.|++.+
T Consensus        81 G~Gv~HIAf~vdDI~~~~~~L~~~Gv~~l~~P~~yy~~l~~r~~~~~~~~~~~~l~~~~il~d~~~~~~llq~ft~~  157 (191)
T cd07250          81 GAGVQHIALATDDIFATVAALRARGVEFLPIPDNYYDDLEARLDGILVDEDLDTLRELGILVDRDDGGYLLQIFTKP  157 (191)
T ss_pred             CCceeEEEEECCCHHHHHHHHHHcCCeeccCchhhHHHHHHhccccccchhHHHHHHCCEEEECCCCCEEEEEeccC
Confidence            578999999999999999999999999887652110       0           0112455566777777777653

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of 4-hydroxyphenylpyruvate to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two,

>TIGR01263 4HPPD 4-hydroxyphenylpyruvate dioxygenase

Probab=99.12  E-value=1e-09  Score=93.54  Aligned_cols=131  Identities=16%  Similarity=0.259  Sum_probs=87.5

Q ss_pred             CCcccceeeeEEEEcC--CHHHHHHHHHHccCCeEeeeCCC-CCcce--EE-EEe--CCcEEEEeecCCCCCCCC-C---
Q 029385            7 NPLCLKSLNHISLVCR--SVEASLDFYQNVLGFFPIRRPGS-FDFDG--AW-LFN--YGMGIHLLKSEEPDNLPK-A---   74 (194)
Q Consensus         7 ~~~~i~~i~hv~l~v~--Dle~s~~FY~~vLG~~~~~~~~~-~~~~~--~~-~~~--~g~~~~l~~~~~~~~~~~-~---   74 (194)
                      ..+.+++|+||++.|+  |+++++.||+++|||+...+..- ..+.+  .+ +..  ....++|.+......... .   
T Consensus       152 ~~~~~~~iDHv~i~V~~~dl~~~~~fY~~~lGf~~~~~~~~~~~~~~~~s~~~~~~~g~~~i~L~ep~~~~~~s~i~~fl  231 (353)
T TIGR01263       152 PGVGLIAIDHLVGNVYRGQMEPWAEFYEKIFGFREIRSFDIKTEYSALNSIVMASPDGKVKIPLNEPASGKDKSQIEEFL  231 (353)
T ss_pred             CCCCeEEeeeeEcccCCccHHHHHHHHHHHhCCceeeEEEeccCCccEEEEEEECCCCcEEEEEeccCCCCCCCHHHHHH
Confidence            3467999999999999  99999999999999988765431 11111  12 222  224566665322111000 0   


Q ss_pred             CCCCCCCccEEEEeeCCHHHHHHHHHhCCCeEEccceec--------C---c------cceEEEEEeCCCCCEEEEEecC
Q 029385           75 GKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEE--------G---G------INVDQLFFHDPDGSMIEICNCD  137 (194)
Q Consensus        75 ~~~~~~g~~hiaf~v~dl~~~~~~l~~~Gi~~~~~~~~~--------~---g------~~~~~~~~~DPDG~~iEi~~~~  137 (194)
                      ....++|..||||.|+|+++.+++|+++|+++...+...        +   +      .....++-.|.+|.++.|++.+
T Consensus       232 ~~~~g~Gv~HiAf~vdDi~~~~~~l~~~Gv~~l~~P~~yY~~l~~r~~~~~~~~~~~l~~~~iL~D~d~~g~llqift~~  311 (353)
T TIGR01263       232 EFYNGAGVQHIALNTDDIVRTVRALRARGVEFLDTPDTYYDLLGERLGGHVKEDLDTLRELNILIDGDEDGYLLQIFTKP  311 (353)
T ss_pred             HHcCCCCccEEEEEcCCHHHHHHHHHHcCCccCcCCHHHHHHHHHHhcccccchHHHHHHCCEEEecCCCceEEEEeccC
Confidence            112357999999999999999999999999988755210        0   0      0112456678889888888764

This protein oxidizes 4-hydroxyphenylpyruvate, a tyrosine and phenylalanine catabolite, to homogentisate. Homogentisate can undergo a further non-enzymatic oxidation and polymerization into brown pigments that protect some bacterial species from light. A similar process occurs spontaneously in blood and is hemolytic (see PubMed:8000039). In some bacterial species, this enzyme has been studied as a hemolysin.

>TIGR01263 4HPPD 4-hydroxyphenylpyruvate dioxygenase

Probab=99.05  E-value=6.8e-09  Score=88.52  Aligned_cols=100  Identities=10%  Similarity=0.162  Sum_probs=70.2

Q ss_pred             ceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeC-CcEEEEeecCCCCCCCC-CCCCCCCCccEEEEee
Q 029385           12 KSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNY-GMGIHLLKSEEPDNLPK-AGKNINPKDNHISFQC   89 (194)
Q Consensus        12 ~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~-g~~~~l~~~~~~~~~~~-~~~~~~~g~~hiaf~v   89 (194)
                      .+++||.|.|+|++++.+||.+.|||+...+.........+.+.. +..+.|.....+.+... .....+++..|++|.|
T Consensus         1 ~~i~hi~~~V~D~~~a~~~y~~~LGf~~~~~~~~~~~~~~~~~~~G~~~l~L~~~~~~~s~~~~~~~~hg~gv~~iaf~V   80 (353)
T TIGR01263         1 DGFDFVEFYVGDAKQAAYYYFTRFGFEKVAKETGHREKASHVLRQGQINFVLTAPYSSDSPAADFAAKHGDGVKDVAFRV   80 (353)
T ss_pred             CceEEEEEEeCCHHHHHHHHHHhcCCcEEEEeecCCceeEEEEEeCCEEEEEecCCCCCchHHHHHHhCCCceEEEEEEE
Confidence            368999999999999999999999999887621111112333343 45566665433221110 0013467899999999


Q ss_pred             CCHHHHHHHHHhCCCeEEccce
Q 029385           90 ENMAIVERRLKEMKIDYVKSRV  111 (194)
Q Consensus        90 ~dl~~~~~~l~~~Gi~~~~~~~  111 (194)
                      +|++++++++.++|+.+..++.
T Consensus        81 ~Dv~~a~~~l~~~Ga~~v~~p~  102 (353)
T TIGR01263        81 DDAAAAFEAAVERGAEPVQAPV  102 (353)
T ss_pred             CCHHHHHHHHHHCCCEeccCCc
Confidence            9999999999999999887654

This protein oxidizes 4-hydroxyphenylpyruvate, a tyrosine and phenylalanine catabolite, to homogentisate. Homogentisate can undergo a further non-enzymatic oxidation and polymerization into brown pigments that protect some bacterial species from light. A similar process occurs spontaneously in blood and is hemolytic (see PubMed:8000039). In some bacterial species, this enzyme has been studied as a hemolysin.

>cd06588 PhnB_like Escherichia coli PhnB and similar proteins; the E

Probab=99.01  E-value=1.7e-08  Score=73.69  Aligned_cols=110  Identities=17%  Similarity=0.029  Sum_probs=71.3

Q ss_pred             EEEEc-CCHHHHHHHHHHccCCeEeeeCCCCC--------cce----EEEEeCCcEEEEeecCCCCCCCCCCCCCCCCcc
Q 029385           17 ISLVC-RSVEASLDFYQNVLGFFPIRRPGSFD--------FDG----AWLFNYGMGIHLLKSEEPDNLPKAGKNINPKDN   83 (194)
Q Consensus        17 v~l~v-~Dle~s~~FY~~vLG~~~~~~~~~~~--------~~~----~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~~   83 (194)
                      ..|.+ .|.+++++||+++||+++.......+        ..+    +-+...+..+.+..... ...     .......
T Consensus         3 p~L~~~~~~~eAi~FY~~~fg~~~~~~~~~~~~~~~~~~~~~~~i~ha~l~i~g~~l~~~d~~~-~~~-----~~~~~~~   76 (128)
T cd06588           3 PYLWFNGNAEEALEFYQSVFGGEITSLTRYGEGPPPDPEEPEGKVMHAELTIGGQRLMASDGGP-GFP-----FTFGNGI   76 (128)
T ss_pred             eEEeeCCCHHHHHHHHHHHhCCEeEEEEEcCCCCCCCCCCcCCcEEEEEEEECCEEEEEEcCCC-CCC-----CCCCCCE
Confidence            45677 89999999999999999887642110        011    11222343444443321 111     1123456


Q ss_pred             EEEEeeCC---HHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEE
Q 029385           84 HISFQCEN---MAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEIC  134 (194)
Q Consensus        84 hiaf~v~d---l~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~  134 (194)
                      ++++.|+|   +++++++|.+.| ++..++.. ..++.+..+++||+|+.|+|.
T Consensus        77 ~l~i~~~~~e~v~~~~~~l~~~g-~~~~~~~~-~~~g~~~~~v~Dp~G~~W~i~  128 (128)
T cd06588          77 SLSVECDSEEEADRLFEALSEGG-TVLMPLQK-TFWSPLFGWVTDRFGVSWQIN  128 (128)
T ss_pred             EEEEECCCHHHHHHHHHHHhcCC-eEeccchh-cCcccccEEEECCCCCEEEeC
Confidence            89999985   778889988877 66655533 345668999999999999973

coli phnB gene is found next to an operon involved in the cleavage of carbon-phosphorus bonds in unactivated alkylphosphonates. The Escherichia coli phnB gene is found next to an operon of fourteen genes (phnC-to-phnP) related to the cleavage of carbon-phosphorus (C-P) bonds in unactivated alkylphosphonates, supporting bacterial growth on alkylphosphonates as the sole phosphorus source. It was originally considered part of that operon. PhnB appears to play no direct catalytic role in the usage of alkylphosphonate. Although many of the proteins in this family have been annotated as 3-demethylubiquinone-9 3-methyltransferase enzymes by automatic annotation programs, the experimental evidence for this assignment is lacking. In Escherichia coli, the gene coding 3-demethylubiquinone-9 3-methyltransferase enzyme is ubiG, which belongs to the AdoMet-MTase protein family. PhnB-like proteins adopt a structural fold similar to

>PRK01037 trmD tRNA (guanine-N(1)-)-methyltransferase/unknown domain fusion protein; Reviewed

Probab=98.88  E-value=1e-08  Score=85.96  Aligned_cols=103  Identities=15%  Similarity=0.194  Sum_probs=69.3

Q ss_pred             eeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeCCcEEEEeecCCCCCCCCCCCCCCCCccEEEEeeC---C
Q 029385           15 NHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQCE---N   91 (194)
Q Consensus        15 ~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~~hiaf~v~---d   91 (194)
                      .||+|+|+|+++|.+||+++||+.. ...+     .....  +..+..+....+.       .....-.-+|+.++   +
T Consensus       249 IfVNLpV~DL~rS~~FYt~LF~~n~-Fsde-----~a~cm--~dtI~vMllt~~D-------~~~~~evLl~Ls~~Sre~  313 (357)
T PRK01037        249 FSVVLEVQDLRRAKKFYSKMFGLEC-WDGD-----KLFLL--GKTSLYLQQTKAE-------KKNRGTTTLSLELECEHD  313 (357)
T ss_pred             EEEEeeeCCHHHHHHHHHHHhCCCC-CCCC-----ccccc--cCcEEEEEecCCC-------CCCcceEEEEeccCCHHH
Confidence            4999999999999999999999885 3322     22222  3233333222221       12234456888888   6


Q ss_pred             HHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEec
Q 029385           92 MAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC  136 (194)
Q Consensus        92 l~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~  136 (194)
                      ++++.+++.++|.....++ ...|.   .--|.||||+.||++..
T Consensus       314 VD~lv~~A~aaGG~~~~~~-~D~Gf---~rsf~D~DGH~WEi~~~  354 (357)
T PRK01037        314 FVRFLRRWEMLGGELGEQA-DGHFP---LRLVFDLDGHIWVVSCV  354 (357)
T ss_pred             HHHHHHHHHHcCCCCCCCc-ccccC---cceeECCCCCEEEEEEE
Confidence            8888999999998655443 33333   56799999999999864

>PLN02875 4-hydroxyphenylpyruvate dioxygenase

Probab=98.74  E-value=8.3e-08  Score=82.67  Aligned_cols=129  Identities=13%  Similarity=0.183  Sum_probs=86.7

Q ss_pred             cccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCC----cc---eEEEEeCC--cEEEEeecCCC---CCCCC--C
Q 029385            9 LCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFD----FD---GAWLFNYG--MGIHLLKSEEP---DNLPK--A   74 (194)
Q Consensus         9 ~~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~----~~---~~~~~~~g--~~~~l~~~~~~---~~~~~--~   74 (194)
                      ..+++|+||++.|.+++.++.||+++|||+........+    ..   ...+....  ..+.|.+....   .+...  -
T Consensus       176 ~gl~~IDHi~iaV~~ld~a~~fY~~vlGf~~~~~~d~~~i~~~~sgl~S~vl~sp~g~v~ipLnEP~~~~~~~SqI~eFL  255 (398)
T PLN02875        176 YGLRRLDHAVGNVPNLLPAVNYIAGFTGFHEFAEFTAEDVGTVDSGLNSMVLASNNEMVLLPLNEPTFGTKRKSQIQTYL  255 (398)
T ss_pred             CCcceeCcceechhhHHHHHHHHHHhcCCeeeeeeccccccccccceEEEEEEcCCCcEEEEeccCCCCCCCcChHHHHH
Confidence            458899999999999999999999999998876443111    11   12222222  45666665421   11100  0


Q ss_pred             CCCCCCCccEEEEeeCCHHHHHHHHHhC----CCeEEccc-e-------ec-C----c------cceEEEEEeCCCCCEE
Q 029385           75 GKNINPKDNHISFQCENMAIVERRLKEM----KIDYVKSR-V-------EE-G----G------INVDQLFFHDPDGSMI  131 (194)
Q Consensus        75 ~~~~~~g~~hiaf~v~dl~~~~~~l~~~----Gi~~~~~~-~-------~~-~----g------~~~~~~~~~DPDG~~i  131 (194)
                      ....++|+.||||.|+||.+..++|+++    |+++...| .       .+ +    .      .....++-.|.+|.++
T Consensus       256 ~~~~G~GIQHIAl~tdDI~~av~~Lra~~~~~Gv~fL~~Pp~~YYd~L~~R~~~~l~~e~~~~L~~~~ILvD~d~~G~LL  335 (398)
T PLN02875        256 EHNEGPGLQHLALKSDDIFGTLREMRARSHIGGFEFMPPPPPTYYKNLKKRVGDVLTEEQIKECEELGILVDKDDQGVLL  335 (398)
T ss_pred             HhcCCCCeeEEEeecCCHHHHHHHHHhccccCCeecCCCChHHHHHHHHHHhccCCChhhHHHHHHcCEEEecCCCceEE
Confidence            1244589999999999999999999998    99988744 1       10 0    0      0123556677889999


Q ss_pred             EEEecC
Q 029385          132 EICNCD  137 (194)
Q Consensus       132 Ei~~~~  137 (194)
                      .|++.+
T Consensus       336 QIFTkp  341 (398)
T PLN02875        336 QIFTKP  341 (398)
T ss_pred             EEeccc
Confidence            998864

>KOG2943 consensus Predicted glyoxalase [Carbohydrate transport and metabolism]

Probab=98.72  E-value=1.6e-07  Score=74.53  Aligned_cols=113  Identities=19%  Similarity=0.334  Sum_probs=76.6

Q ss_pred             eeeeEEEEcCCHHHHHHHHHHccCCeEeeeCC---------CCCcceEE---EEeCC--cEEEEeecCCCCCCCCCCCCC
Q 029385           13 SLNHISLVCRSVEASLDFYQNVLGFFPIRRPG---------SFDFDGAW---LFNYG--MGIHLLKSEEPDNLPKAGKNI   78 (194)
Q Consensus        13 ~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~---------~~~~~~~~---~~~~g--~~~~l~~~~~~~~~~~~~~~~   78 (194)
                      +.-|+.+.|-|..++++||+++|||++.+..+         +.++++.|   +.++|  ....+++.........  -..
T Consensus        17 r~LH~VfkVgdr~kti~Fyt~vlgMkvLRheef~egc~aacngpyd~kwSktmvGyGpEdshFViELTYNYgV~~--Yel   94 (299)
T KOG2943|consen   17 RALHYVFKVGDRAKTIDFYTEVLGMKVLRHEEFEEGCEAACNGPYDGKWSKTMVGYGPEDSHFVIELTYNYGVSK--YEL   94 (299)
T ss_pred             heeeEeEeecchHHHHHHHHHhhcceeeehhhhhhhhhhhcCCCcccchhhhheecCCCcccEEEEEEeccCccc--eec
Confidence            45699999999999999999999999987543         23345555   34555  2333333332222221  156


Q ss_pred             CCCccEEEEeeCCHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEec
Q 029385           79 NPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC  136 (194)
Q Consensus        79 ~~g~~hiaf~v~dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~  136 (194)
                      +.+..||.+.++|+-...+.+..-|-   .      +.+.-.+++.||||+.++|.+.
T Consensus        95 Gndfg~i~I~s~dv~~~ve~v~~p~~---~------~~g~~~~~v~dPdGykF~l~~~  143 (299)
T KOG2943|consen   95 GNDFGGITIASDDVFSKVEKVNAPGG---K------GSGCGIAFVKDPDGYKFYLIDR  143 (299)
T ss_pred             cCCcccEEEeHHHHHHHHHHhcCcCC---c------ccceEEEEEECCCCcEEEEecc
Confidence            67888999999887776666554432   1      1123577999999999999973

>COG2514 Predicted ring-cleavage extradiol dioxygenase [General function prediction only]

Probab=98.65  E-value=2.6e-07  Score=74.72  Aligned_cols=100  Identities=16%  Similarity=0.189  Sum_probs=69.1

Q ss_pred             ccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeCCcEEEEeecCCCCCCCCCCCCCCCCccEEEEee
Q 029385           10 CLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQC   89 (194)
Q Consensus        10 ~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~~hiaf~v   89 (194)
                      .-+.|+||+|.|.|++++.+||+++|||+...+.+    ...|+...+...|+....+...-.........|+..+.+.+
T Consensus       165 ~~t~IGHvHL~v~~l~eA~~fY~~~LG~~~~~~~~----~A~F~a~G~YHHHia~N~W~s~~~~~~~~~~~GLa~~~i~~  240 (265)
T COG2514         165 AGTIIGHVHLKVADLEEAEQFYEDVLGLEVTARGP----SALFLASGDYHHHLAANTWNSRGARPRNANASGLAWLEIHT  240 (265)
T ss_pred             CCcEEeEEEEEeCCHHHHHHHHHHhcCCeeeecCC----cceEEecCCcceeEEEeccccCCCCCCCCCCCCcceEEEEc
Confidence            45789999999999999999999999999999842    33454444555666655554433332235678889999998


Q ss_pred             CCHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEE
Q 029385           90 ENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEIC  134 (194)
Q Consensus        90 ~dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~  134 (194)
                      ++-........                     ...||.|+.|.+.
T Consensus       241 ~~~~~l~~~~~---------------------~~~Dp~G~~i~~~  264 (265)
T COG2514         241 PDPEKLDATGT---------------------RLTDPWGIVIRVV  264 (265)
T ss_pred             CCccccccccc---------------------ceecCCCceEEEe
Confidence            86433221111                     1189999998874

>COG2764 PhnB Uncharacterized protein conserved in bacteria [Function unknown]

Probab=98.64  E-value=2.2e-06  Score=63.34  Aligned_cols=117  Identities=17%  Similarity=0.121  Sum_probs=76.2

Q ss_pred             EEEEcC-CHHHHHHHHHHccCCeEeeeCCCCCc--------ceEEE---EeCCcEEEEeecCCCCCCCCCCCCCCCCccE
Q 029385           17 ISLVCR-SVEASLDFYQNVLGFFPIRRPGSFDF--------DGAWL---FNYGMGIHLLKSEEPDNLPKAGKNINPKDNH   84 (194)
Q Consensus        17 v~l~v~-Dle~s~~FY~~vLG~~~~~~~~~~~~--------~~~~~---~~~g~~~~l~~~~~~~~~~~~~~~~~~g~~h   84 (194)
                      ..|..+ |.+++++||+++||++...+....+-        .+..+   +..+...-++....+...+.   ..+..-..
T Consensus         4 PYl~f~gn~~~Al~fY~~vFgae~~~~~~~~d~~~~~~~~~~~~i~HA~l~i~g~~im~sd~~~~~~~~---~~~~~s~~   80 (136)
T COG2764           4 PYLFFNGNAREALAFYKEVFGAEELKRVPFGDMPSSAGEPPGGRIMHAELRIGGSTIMLSDAFPDMGAT---EGGGTSLS   80 (136)
T ss_pred             eEEEECCCHHHHHHHHHHHhCceEEEEEEcCccCccccccccCceEEEEEEECCEEEEEecCCCccCcc---cCCCeeEE
Confidence            457778 99999999999999998887543321        01111   12221222222222211110   11223345


Q ss_pred             EEEeeCCHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEecC
Q 029385           85 ISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD  137 (194)
Q Consensus        85 iaf~v~dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~  137 (194)
                      |-+.++|++++++++.+.|+++..+.. ..-|+.+...+.||.|+.|-|....
T Consensus        81 l~~~~~d~da~f~~a~~aGa~v~mpl~-~~fwG~r~G~v~D~fGv~W~l~~~~  132 (136)
T COG2764          81 LDLYVEDVDAVFERAAAAGATVVMPLE-DTFWGDRYGQVTDPFGVVWMLNTPV  132 (136)
T ss_pred             EEEEehHHHHHHHHHHhcCCeEEecch-hcCcccceEEEECCCCCEEEEecCc
Confidence            667777999999999999988887663 3345669999999999999998653

>KOG2943 consensus Predicted glyoxalase [Carbohydrate transport and metabolism]

Probab=98.58  E-value=3.1e-07  Score=72.94  Aligned_cols=115  Identities=15%  Similarity=0.245  Sum_probs=76.6

Q ss_pred             eeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeCC---cEEEEeecCCCCCCCCCCCCCCCCccEEEEee
Q 029385           13 SLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYG---MGIHLLKSEEPDNLPKAGKNINPKDNHISFQC   89 (194)
Q Consensus        13 ~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~g---~~~~l~~~~~~~~~~~~~~~~~~g~~hiaf~v   89 (194)
                      .+.+|.|.|.|++++++||.++|||++.+....   ....+++++   ..++|......-       ....+...++|.+
T Consensus       149 pv~~V~l~VgdL~ks~kyw~~~lgM~ilekeek---~t~~~mgYgd~q~~LElt~~~~~i-------d~~kg~griafai  218 (299)
T KOG2943|consen  149 PVLQVMLNVGDLQKSIKYWEKLLGMKILEKEEK---YTRARMGYGDEQCVLELTYNYDVI-------DRAKGFGRIAFAI  218 (299)
T ss_pred             CeEEEEEEehhHHHHHHHHHHHhCcchhhhhhh---hhhhhhccCCcceEEEEEeccCcc-------cccccceeEEEec
Confidence            456899999999999999999999998884321   122234444   335555443322       2234556677766


Q ss_pred             C--CHHHHHHHHHhCCCeEEccceec---CccceEEEEEeCCCCCEEEEEecC
Q 029385           90 E--NMAIVERRLKEMKIDYVKSRVEE---GGINVDQLFFHDPDGSMIEICNCD  137 (194)
Q Consensus        90 ~--dl~~~~~~l~~~Gi~~~~~~~~~---~g~~~~~~~~~DPDG~~iEi~~~~  137 (194)
                      +  ++..+.+.++..+-.+..+....   ++.....+.+.||||+.|-++...
T Consensus       219 p~d~~~~l~e~iK~~n~~i~~~lttl~tPgka~vqvvil~DPDgheicfVdde  271 (299)
T KOG2943|consen  219 PTDDLPKLQEAIKSANGTILTPLTTLDTPGKATVQVVILADPDGHEICFVDDE  271 (299)
T ss_pred             cccccccHHHHHHHhccccccceeeccCCCcceeEEEEEECCCCceEEEeccH
Confidence            6  77777777777765555444322   234578999999999999888643

>PF14506 CppA_N: CppA N-terminal; PDB: 3E0R_D

Probab=98.45  E-value=1e-05  Score=57.92  Aligned_cols=114  Identities=22%  Similarity=0.169  Sum_probs=63.3

Q ss_pred             eEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeCCcEEEEeecCCCCCCCCCCCCCCCCccEEEEeeCCHHHH
Q 029385           16 HISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQCENMAIV   95 (194)
Q Consensus        16 hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~~hiaf~v~dl~~~   95 (194)
                      +-.|.|+|-+...+||+++|||++..+..    ..+++ +.......+..+..++...+.-.....++++.+.|++-.++
T Consensus         3 ~PvlRVnnR~~ni~FY~~~LGfkll~EEn----a~a~l-g~~~~~erlvlEESP~~rtr~V~G~KKl~~ivIkv~~~~EI   77 (125)
T PF14506_consen    3 IPVLRVNNRDLNIDFYQKTLGFKLLSEEN----ALAIL-GDQQKEERLVLEESPSMRTRAVEGPKKLNRIVIKVPNPKEI   77 (125)
T ss_dssp             EEEEEESSHHHHHHHHTTTT--EEEEEET----TEEEE-E-TT--EEEEEEE--TTT-B--SSS-SEEEEEEEESSHHHH
T ss_pred             CceEEEcCHHHhHHHHHhccCcEEeeccc----cEEEe-cCCCCceEEEEecCCccccccccCcceeeEEEEEcCCHHHH
Confidence            67899999999999999999999999874    34444 33333333333222232221114456889999999987776


Q ss_pred             HHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEecCC
Q 029385           96 ERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV  138 (194)
Q Consensus        96 ~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~~  138 (194)
                      .+.|... ..+...  .. |...+.|-..+|+|..+.|...++
T Consensus        78 e~LLar~-~~~~~l--~k-g~~gyAfe~vSPEgd~~llhaEdd  116 (125)
T PF14506_consen   78 EALLARG-AQYDRL--YK-GKNGYAFEAVSPEGDRFLLHAEDD  116 (125)
T ss_dssp             HHHHHC--S--SEE--EE--SSSEEEEEE-TT--EEEEE--S-
T ss_pred             HHHHhcc-ccccee--EE-cCCceEEEEECCCCCEEEEEEcCC
Confidence            6655433 332221  11 122278888899999999997653

>PF14696 Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal ; PDB: 1CJX_A 2R5V_A

Probab=98.44  E-value=6.1e-07  Score=66.56  Aligned_cols=123  Identities=21%  Similarity=0.364  Sum_probs=80.4

Q ss_pred             CCCcccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeCC-cEEEEeecCCCCCCCC-CCCCCCCCcc
Q 029385            6 ENPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYG-MGIHLLKSEEPDNLPK-AGKNINPKDN   83 (194)
Q Consensus         6 ~~~~~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~g-~~~~l~~~~~~~~~~~-~~~~~~~g~~   83 (194)
                      .+|+.+.++.+|.+.|.+.++...+++ .|||+.+.+..+   ....++..| +.+.|-.  .+.+... .....+++..
T Consensus         2 ~nP~g~~G~dFvEFa~~~~~~l~~~~~-~lGF~~~a~hrs---k~v~l~rQG~I~~vln~--ep~s~a~~~~~~HG~sv~   75 (139)
T PF14696_consen    2 DNPLGLDGFDFVEFAVPDAQALAQLFT-ALGFQPVARHRS---KDVTLYRQGDINFVLNS--EPDSFAAEFAAQHGPSVC   75 (139)
T ss_dssp             --TT-EEEEEEEEEE-SSTTSCHHHHC-CCCEEEECCECC---CSEEEEEETTEEEEEEE--ESTSCHHHHHHHHSSEEE
T ss_pred             CCCCCCCCeEEEEEecCCHHHHHHHHH-HhCcceEEecCC---cceEEEEeCCEEEEEeC--CCcchHHHHHHhcCCEEE
Confidence            368999999999999999888888885 599999887543   234555555 3444433  2222110 0024467899


Q ss_pred             EEEEeeCCHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEec
Q 029385           84 HISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC  136 (194)
Q Consensus        84 hiaf~v~dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~  136 (194)
                      -|+|.|+|..++++++.+.|.+....+.....  ...--++-+.|.++.+++.
T Consensus        76 aiafrV~Da~~A~~rA~~~GA~~~~~~~~~~e--~~~paI~g~G~sl~yfVdr  126 (139)
T PF14696_consen   76 AIAFRVDDAAAAYERAVALGAEPVQEPTGPGE--LNIPAIRGIGGSLHYFVDR  126 (139)
T ss_dssp             EEEEEES-HHHHHHHHHHTT--EEEEEEETT---BEEEEEE-CCC-EEEEEE-
T ss_pred             EEEEEeCCHHHHHHHHHHcCCcCcccCCCCCc--EeeeeEEccCCCEEEEEec
Confidence            99999999999999999999998876643332  2556778889999988875

>KOG0638 consensus 4-hydroxyphenylpyruvate dioxygenase [Amino acid transport and metabolism]

Probab=98.36  E-value=1.1e-06  Score=72.36  Aligned_cols=104  Identities=15%  Similarity=0.197  Sum_probs=70.3

Q ss_pred             cccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEE---EEeCC-cEEEEeecCCCCCCC-C-CCCCCCCCc
Q 029385            9 LCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAW---LFNYG-MGIHLLKSEEPDNLP-K-AGKNINPKD   82 (194)
Q Consensus         9 ~~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~---~~~~g-~~~~l~~~~~~~~~~-~-~~~~~~~g~   82 (194)
                      -++.+++||.+.|.|...++.||+..|||++..-.+-......|   .+..| +...+.....+.... + .-...+.+.
T Consensus        13 g~~l~f~Hi~F~vgna~q~A~~y~~~fGfep~A~~~letg~~~~~s~alr~g~~vFv~~s~~~p~~~~~G~~l~~Hgdgv   92 (381)
T KOG0638|consen   13 GKFLRFHHIEFWVGNAKQAARWYCSGFGFEPLAYRGLETGSREWASHALRQGKIVFVFNSAYNPDNSEYGDHLVKHGDGV   92 (381)
T ss_pred             cceeeeeEEEEEecCcHHHHHHHHhhcCCcchhcccccccchHHHHHHhhcCCEEEEEecCCCCCchhhhhhhhhcccch
Confidence            46889999999999999999999999999987743211011111   23333 333333333332211 1 001344567


Q ss_pred             cEEEEeeCCHHHHHHHHHhCCCeEEcccee
Q 029385           83 NHISFQCENMAIVERRLKEMKIDYVKSRVE  112 (194)
Q Consensus        83 ~hiaf~v~dl~~~~~~l~~~Gi~~~~~~~~  112 (194)
                      .-+||.|+|++++.+.+.++|+.+..++.+
T Consensus        93 kdvafeVeD~da~~~~~va~Ga~v~~~p~~  122 (381)
T KOG0638|consen   93 KDVAFEVEDADAIFQEAVANGAKVVRPPWE  122 (381)
T ss_pred             hceEEEecchHHHHHHHHHcCCcccCCcce
Confidence            789999999999999999999999988643

>PF13468 Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B

Probab=98.29  E-value=3.1e-06  Score=65.07  Aligned_cols=122  Identities=17%  Similarity=0.275  Sum_probs=64.4

Q ss_pred             eeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCc---ceEEEEeCCcEEEEeecCCCCCCCCCCC-------CCCCCcc
Q 029385           14 LNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDF---DGAWLFNYGMGIHLLKSEEPDNLPKAGK-------NINPKDN   83 (194)
Q Consensus        14 i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~---~~~~~~~~g~~~~l~~~~~~~~~~~~~~-------~~~~g~~   83 (194)
                      |+|+.+.|+|++++.++|++.|||.+.....+..+   +..+.+..+ .++++........+....       ....|..
T Consensus         1 lDH~v~~v~dl~~a~~~~~~~lGf~~~~gg~h~~~GT~N~li~f~~~-YlEli~i~~~~~~~~~~~~~~~~~~~~~~g~~   79 (175)
T PF13468_consen    1 LDHLVIAVRDLDAAVERFEQRLGFTVTPGGEHPGWGTANALIPFGDG-YLELIAIDPEAPAPDRGRWFGLDRLAGGEGLY   79 (175)
T ss_dssp             EEEEEEE-TTGGG----GGGS--S--EEEEE-TTT-EEEEEEE-SSS-EEEEEEES-HHHSTGGGT-TTTHHHHT--EEE
T ss_pred             CCEEEEEcCCHHHHHHhhhhcceEeecCCCcCCCCccEEEEEeeCCc-eEEEEEeCCcccccccccceechhhcCCCCeE
Confidence            68999999999999999988899999887655431   223345555 899988543222211110       1367888


Q ss_pred             EEEEeeCCHHHHHHHHHhCCCeEEccceecCc-cceEEEEEeCC----CCCEEEEEec
Q 029385           84 HISFQCENMAIVERRLKEMKIDYVKSRVEEGG-INVDQLFFHDP----DGSMIEICNC  136 (194)
Q Consensus        84 hiaf~v~dl~~~~~~l~~~Gi~~~~~~~~~~g-~~~~~~~~~DP----DG~~iEi~~~  136 (194)
                      .+||.++|+++..+++++.|+.........++ ...+.+++.++    .+..-++++.
T Consensus        80 ~~~l~t~d~~~~~~~l~~~G~~~~~r~~~dG~~~~w~~~~~~~~~~p~~~~~Pf~i~~  137 (175)
T PF13468_consen   80 GWALRTDDIEAVAARLRAAGLDAGSRVRPDGGDLRWRLAFPEDGALPFGGLLPFFIQW  137 (175)
T ss_dssp             EEEEE-S-HHHHHHHHHTTT-EEEEEEEEEE-EEEEEEEEEE-SS---SS---EEEEE
T ss_pred             EEEEecCCHHHHHHHHHhcCCCCCCcCcCCCCcceEEEEEeCCcccccCCCCcEEEEe
Confidence            99999999999999999999863222211111 22355666664    2456666643

>PLN02875 4-hydroxyphenylpyruvate dioxygenase

Probab=98.17  E-value=5.2e-05  Score=65.52  Aligned_cols=123  Identities=11%  Similarity=0.086  Sum_probs=79.5

Q ss_pred             eeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCc---ceEEEEeCC-cEEEEeecCCCC--C----------CCC--CC
Q 029385           14 LNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDF---DGAWLFNYG-MGIHLLKSEEPD--N----------LPK--AG   75 (194)
Q Consensus        14 i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~---~~~~~~~~g-~~~~l~~~~~~~--~----------~~~--~~   75 (194)
                      ++||.+.|.|..++..||+..|||+.+...+....   ...+++..| +.+.+.....+.  .          .+.  ..
T Consensus         1 ~dhvef~v~da~~~~~~f~~~~GF~~~a~~~~~tg~~~~~s~~~r~g~i~fv~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (398)
T PLN02875          1 FHHVEFWCGDATNTARRFSWGLGMPLVAKSDLTTGNTTYASYLLRSGDLVFLFTAPYSPKIGAGDDDPASTAPHPSFSSD   80 (398)
T ss_pred             CeEEEEEcCCHHHHHHHHHHhcCCCeEeecCCCCCCcceEEEEEEeCCEEEEEeCCCCCccccccccccccccccccCcH
Confidence            58999999999999999999999999886642111   124445555 333333332120  0          000  00


Q ss_pred             ------CCCCCCccEEEEeeCCHHHHHHHHHhCCCeEEccceecC----ccceEEEEEeCCCCCEEEEEec
Q 029385           76 ------KNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEG----GINVDQLFFHDPDGSMIEICNC  136 (194)
Q Consensus        76 ------~~~~~g~~hiaf~v~dl~~~~~~l~~~Gi~~~~~~~~~~----g~~~~~~~~~DPDG~~iEi~~~  136 (194)
                            ...+++..-|+|+|+|++++++++.++|.....++....    +......-+.-++|..+-+++.
T Consensus        81 ~a~~~~~~HG~gV~dvaf~V~Da~~a~~~A~~~Ga~~~~~~~~~~d~~~~g~~~~~~I~~~G~~~h~lVdr  151 (398)
T PLN02875         81 AARRFFAKHGLAVRAVGVLVEDAEEAFRTSVAHGARPVLEPTELGDEASGGKAVIAEVELYGDVVLRYVSY  151 (398)
T ss_pred             HHHHHHHHcCCeeeEEEEEECCHHHHHHHHHHCCCeeccCCccccccccCceEEEEEEEccCCcEEEEEcc
Confidence                  134578889999999999999999999999877654321    1112333455667777777664

>PRK10148 hypothetical protein; Provisional

Probab=98.08  E-value=0.00036  Score=52.32  Aligned_cols=117  Identities=13%  Similarity=-0.002  Sum_probs=68.8

Q ss_pred             eEEEEcC-CHHHHHHHHHHccCCeEeeeCCCCC------------------cceEEE---EeCCcEEEEeecCCCCCCCC
Q 029385           16 HISLVCR-SVEASLDFYQNVLGFFPIRRPGSFD------------------FDGAWL---FNYGMGIHLLKSEEPDNLPK   73 (194)
Q Consensus        16 hv~l~v~-Dle~s~~FY~~vLG~~~~~~~~~~~------------------~~~~~~---~~~g~~~~l~~~~~~~~~~~   73 (194)
                      ...|... +.+++.+||+++||.++.......+                  .++..+   +..+ +..++........  
T Consensus         4 ~pyL~f~g~a~eAi~FY~~~Fgae~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~Ha~l~i~-g~~lm~sD~~~~~--   80 (147)
T PRK10148          4 SPYLSFAGNCADAIAYYQQTLGAELLYKISFGEMPKSAQDSEEGCPSGMQFPDTAIAHANVRIA-GSDIMMSDAIPSG--   80 (147)
T ss_pred             EEEEEeCCCHHHHHHHHHHHhCCEEEEEEEcccCCccccccccCCCccccCcCCcEEEEEEEEC-CEEEEEECCCCCc--
Confidence            3456665 8999999999999998765421000                  011111   1122 1222222211111  


Q ss_pred             CCCCCCCCccEEEEeeCCHHH---HHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEecCCCC
Q 029385           74 AGKNINPKDNHISFQCENMAI---VERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLP  140 (194)
Q Consensus        74 ~~~~~~~g~~hiaf~v~dl~~---~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~~~p  140 (194)
                         .......++++.++|.++   ++++|. .|.++..+..+ ..++.+...+.||-|+.|-|......|
T Consensus        81 ---~~~~~~~~l~l~~~d~ee~~~~~~aLa-~gg~v~mpl~~-~~wg~~~g~v~D~fGi~W~l~~~~~~~  145 (147)
T PRK10148         81 ---KAHYSGFTLVLDTQDVEEGKRWFDNLA-ANGKIEMAWQE-TFWAHGFGKVTDKFGVPWMINVVKQQP  145 (147)
T ss_pred             ---CCCCCeEEEEEECCCHHHHHHHHHHhh-CCCEEEecchh-cchhhccEEEECCCCCEEEEEecCCCC
Confidence               111135678888888776   566664 66676665533 335558889999999999998765444

>COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins [Amino acid transport and metabolism / General function prediction only]

Probab=97.96  E-value=1e-05  Score=67.81  Aligned_cols=104  Identities=15%  Similarity=0.267  Sum_probs=70.4

Q ss_pred             CCcccceeeeEEEEcC--CHHHHHHHHHHccCCeEeeeCCC-CCcceE---EEEe-CC-cEEEEeecCCCCCCCCC--CC
Q 029385            7 NPLCLKSLNHISLVCR--SVEASLDFYQNVLGFFPIRRPGS-FDFDGA---WLFN-YG-MGIHLLKSEEPDNLPKA--GK   76 (194)
Q Consensus         7 ~~~~i~~i~hv~l~v~--Dle~s~~FY~~vLG~~~~~~~~~-~~~~~~---~~~~-~g-~~~~l~~~~~~~~~~~~--~~   76 (194)
                      ....+..|+|++..|.  .++.++.||+++|||+.....+- .+..+.   .+.+ .| ..+-|-...+..+....  ..
T Consensus       161 ~~~g~~~IDHl~~nv~~~~md~w~~FY~~if~~~~~~~fdi~~p~tgl~Sram~Sp~G~vrlplN~s~~~~sqi~efl~~  240 (363)
T COG3185         161 GGVGLTAIDHLTHNVKAGQMDTWVLFYESLFGFREIQYFDIPGPITGLRSRAMVSPCGKVRLPLNESADDKSQIGEFLRE  240 (363)
T ss_pred             cccCceeechhhhhcchhhHHHHHHHHHHHhCccceeeEeccCCcccEEEeeEecCCCcEEeecccCCCchhHHHHHHHH
Confidence            3445789999999986  99999999999999988776431 111211   1222 22 33333333332221100  02


Q ss_pred             CCCCCccEEEEeeCCHHHHHHHHHhCCCeEEccc
Q 029385           77 NINPKDNHISFQCENMAIVERRLKEMKIDYVKSR  110 (194)
Q Consensus        77 ~~~~g~~hiaf~v~dl~~~~~~l~~~Gi~~~~~~  110 (194)
                      ..+.|+.||+|.++||-++.++|+++|+++...+
T Consensus       241 y~G~GIQHIA~~T~dI~~tv~~lr~rG~~fl~ip  274 (363)
T COG3185         241 YRGEGIQHIAFGTDDIYATVAALRERGVKFLPIP  274 (363)
T ss_pred             hCCCcceEEEecccHHHHHHHHHHHcCCccCCCc
Confidence            5678999999999999999999999999988654

>COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins [Amino acid transport and metabolism / General function prediction only]

Probab=97.35  E-value=0.0041  Score=52.41  Aligned_cols=119  Identities=20%  Similarity=0.336  Sum_probs=81.9

Q ss_pred             CCCCCCcccceeeeEEEEcCCH-HHHHHHHHHccCCeEeeeCCCCCcceEEEEeCCcEEEEeecCCCCCC--CCCCCCCC
Q 029385            3 ESVENPLCLKSLNHISLVCRSV-EASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNL--PKAGKNIN   79 (194)
Q Consensus         3 ~~~~~~~~i~~i~hv~l~v~Dl-e~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~--~~~~~~~~   79 (194)
                      .....|+...++.+|.+.|.|. ++...++. .|||....+.-+   ..+.++..| ++-++....+.+.  ... ...+
T Consensus        12 ~~~~~P~~~~GfeFvEf~~~d~~~~l~~l~~-~lGF~~~~~Hrs---k~v~l~rQG-dinlvvn~~~~s~a~~f~-~~Hg   85 (363)
T COG3185          12 DTLANPEGTDGFEFVEFAVPDPQEALGALLG-QLGFTAVAKHRS---KAVTLYRQG-DINLVVNAEPDSFAAEFL-DKHG   85 (363)
T ss_pred             ccccCCCCCCceeEEEEecCCHHHHHHHHHH-HhCccccccccc---cceeEEEeC-CEEEEEcCCCcchhhHHH-HhcC
Confidence            3445678899999999999999 66666665 599988776543   355666666 4544444433331  111 2667


Q ss_pred             CCccEEEEeeCCHHHHHHHHHhCCCeEEccce---e-----cCccceEEEEEeCCC
Q 029385           80 PKDNHISFQCENMAIVERRLKEMKIDYVKSRV---E-----EGGINVDQLFFHDPD  127 (194)
Q Consensus        80 ~g~~hiaf~v~dl~~~~~~l~~~Gi~~~~~~~---~-----~~g~~~~~~~~~DPD  127 (194)
                      ++..-++|.|+|...++++..+.|.+....+.   +     -.+.+...+||.|.+
T Consensus        86 ps~~a~a~~V~DA~~A~a~A~a~gA~~~~~~~g~~e~~ipai~giggsllyfvd~~  141 (363)
T COG3185          86 PSACAMAFRVDDAEQALARALALGARTIDTEIGAGEVDIPAIRGIGGSLLYFVDRY  141 (363)
T ss_pred             CchheeEEeeCCHHHHHHHHHHcCCccccCCCCCccccccceeccCCcEEEEeccC
Confidence            88899999999999999999999985443321   0     012345788888887

>KOG0638 consensus 4-hydroxyphenylpyruvate dioxygenase [Amino acid transport and metabolism]

Probab=96.97  E-value=0.001  Score=55.18  Aligned_cols=128  Identities=17%  Similarity=0.219  Sum_probs=84.7

Q ss_pred             cccceeeeEEEEcC--CHHHHHHHHHHccCCeEeeeCCCCCcc------eEEE-EeCCcEEEEeecCCCCCCCCCC----
Q 029385            9 LCLKSLNHISLVCR--SVEASLDFYQNVLGFFPIRRPGSFDFD------GAWL-FNYGMGIHLLKSEEPDNLPKAG----   75 (194)
Q Consensus         9 ~~i~~i~hv~l~v~--Dle~s~~FY~~vLG~~~~~~~~~~~~~------~~~~-~~~g~~~~l~~~~~~~~~~~~~----   75 (194)
                      +.+..++|+...++  ..+.+.+||.+.|||.-.+..+.....      ..|+ .++...+.+-..+.......+.    
T Consensus       174 ~~~~~iDH~vgn~p~~em~sa~~wy~~~l~Fhrfwsvdd~~v~te~SaLrs~vlan~~esi~mpinEp~~G~k~ksQIqe  253 (381)
T KOG0638|consen  174 GGLNRIDHVVGNQPDGEMESALRWYEKCLGFHRFWSVDDSQVHTEYSALRSIVLANYEESIKMPINEPAPGKKKKSQIQE  253 (381)
T ss_pred             cceeehhhhhccCCcccchHHHHHHHHhhcccccccCCcchhhhHHHHHHHHHHhcCCccEEEeccCCCCCCccHHHHHH
Confidence            57889999999999  788999999999999888776421111      1122 2233233332222111111111    


Q ss_pred             ---CCCCCCccEEEEeeCCHHHHHHHHHhCCCeEEccceec-------Cc-------------cceEEEEEeCCCCCEEE
Q 029385           76 ---KNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEE-------GG-------------INVDQLFFHDPDGSMIE  132 (194)
Q Consensus        76 ---~~~~~g~~hiaf~v~dl~~~~~~l~~~Gi~~~~~~~~~-------~g-------------~~~~~~~~~DPDG~~iE  132 (194)
                         ...++|+.||++.++||-++.+.++++|.++...|...       -+             .....+.-.|-.|+++.
T Consensus       254 yv~y~gG~GvQHiaL~tedIi~Ai~~lr~rG~eFLs~Ps~YYqnl~erl~~~~~~vked~~~l~el~ILvD~De~gyLLQ  333 (381)
T KOG0638|consen  254 YVEYHGGAGVQHIALNTEDIIEAIRGLRARGGEFLSPPSTYYQNLKERLSTSIRKVKEDIKLLEELGILVDFDENGYLLQ  333 (381)
T ss_pred             HHHhcCCCceeeeeecchHHHHHHHHHHhcCCccccCCHHHHHhHHHHhhhhhhhhhccHHHHHHcCeEEecCCCcEEee
Confidence               24568999999999999999999999999988655210       00             01234555677899999


Q ss_pred             EEec
Q 029385          133 ICNC  136 (194)
Q Consensus       133 i~~~  136 (194)
                      |.+.
T Consensus       334 IFTK  337 (381)
T KOG0638|consen  334 IFTK  337 (381)
T ss_pred             eecc
Confidence            9975

>PF15067 FAM124: FAM124 family

Probab=96.45  E-value=0.022  Score=45.56  Aligned_cols=103  Identities=18%  Similarity=0.289  Sum_probs=64.1

Q ss_pred             eeeEEEEcC--CHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeC--CcEEEEeecCCCCCCCCCCCCCCCCccEEEEee
Q 029385           14 LNHISLVCR--SVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNY--GMGIHLLKSEEPDNLPKAGKNINPKDNHISFQC   89 (194)
Q Consensus        14 i~hv~l~v~--Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~--g~~~~l~~~~~~~~~~~~~~~~~~g~~hiaf~v   89 (194)
                      +--++|.|+  |.+.+++||+-+|+-+...+..++   ..+.+..  +..+.+--..-+....    .......-+.|.|
T Consensus       129 ilRftly~~~~N~~d~vr~Yelil~~~~~~~k~~F---C~F~lys~~~~~iQlsLK~lp~~~~----p~p~esavLqF~V  201 (236)
T PF15067_consen  129 ILRFTLYCSFDNYEDMVRFYELILQREPTQQKEDF---CFFTLYSQPGLDIQLSLKQLPPGMS----PEPTESAVLQFRV  201 (236)
T ss_pred             EEEEEEEecCCCHHHHHHHHHHHhccCcceeeCCc---EEEEEecCCCeEEEEEeccCCCCCC----cccccceEEEEEe
Confidence            445889999  999999999999999988776532   2333332  3334443322222211    2222345689999


Q ss_pred             CCHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEE
Q 029385           90 ENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEI  133 (194)
Q Consensus        90 ~dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi  133 (194)
                      .|+.++...|-.--.++..          ...--.|||||.|-+
T Consensus       202 ~~igqLvpLLPnpc~PIS~----------~rWqT~D~DGNkILL  235 (236)
T PF15067_consen  202 EDIGQLVPLLPNPCSPISE----------TRWQTEDYDGNKILL  235 (236)
T ss_pred             cchhhhcccCCCCcccccC----------CcceeeCCCCCEecc
Confidence            9999987765443332222          224578999998843

>PF13669 Glyoxalase_4: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; PDB: 3RMU_B 3ISQ_A 1JC5_D 1JC4_D 3HDP_A 2QH0_A 3GM5_A 3OA4_A 3CT8_A

Probab=95.63  E-value=0.045  Score=38.28  Aligned_cols=82  Identities=12%  Similarity=0.096  Sum_probs=54.8

Q ss_pred             cEEEEeeCCHHHHHHHHHh-CCCeEEccceecCccceEEEEEeCCCC-CEEEEEecCCCCcCcC--CCcc--hhhccccc
Q 029385           83 NHISFQCENMAIVERRLKE-MKIDYVKSRVEEGGINVDQLFFHDPDG-SMIEICNCDVLPVVPL--AGDA--VRIRSCTS  156 (194)
Q Consensus        83 ~hiaf~v~dl~~~~~~l~~-~Gi~~~~~~~~~~g~~~~~~~~~DPDG-~~iEi~~~~~~p~~p~--~~~~--~~~~~~~~  156 (194)
                      +||+|.|+|++++.+.+.+ .|+........ .....+..++..++| ..|||++..... .++  ...|  .+.+.+  
T Consensus         1 dHv~i~V~Dl~~a~~~~~~~lG~~~~~~~~~-~~~~v~~~~~~~~~~~~~iELi~p~~~~-~~~~~~~~gi~Hia~~v--   76 (109)
T PF13669_consen    1 DHVGIVVPDLDAAAAFYCDVLGFEPWERYRD-EPQGVRVAFLYLGDGPVQIELIQPLDGD-SPLDRGGGGIHHIAFEV--   76 (109)
T ss_dssp             EEEEEEES-HHHHHHHHHHCTTHEEEEEEEE-GCTTEEEEEEEETTETEEEEEEEESSTT-CHHHHTSSEEEEEEEEE--
T ss_pred             CEEEEEcCCHHHHHHHHHHhhCCcEEEEEec-CCCCEEEEEEEeCCCcEEEEEEEeCCCC-cccccCCCCEEEEEEEe--
Confidence            5999999999999999998 89886544322 223447778888888 689999975533 211  2333  344444  


Q ss_pred             ccchhhhhhhhhh
Q 029385          157 TVNCNFHQQQIQQ  169 (194)
Q Consensus       157 ~~~~~~~~~~~~~  169 (194)
                       -|++...++++.
T Consensus        77 -~D~d~~~~~l~~   88 (109)
T PF13669_consen   77 -DDLDAAIARLEA   88 (109)
T ss_dssp             -SHHHHHHHHHHH
T ss_pred             -CCHHHHHHHHHH
Confidence             577777777654

>cd08352 Glo_EDI_BRP_like_1 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=95.62  E-value=0.19  Score=35.02  Aligned_cols=85  Identities=11%  Similarity=0.092  Sum_probs=53.1

Q ss_pred             CccEEEEeeCCHHHHHHHHHh-CCCeEEccceecCccceEEEEEeCCCCCEEEEEecCCCCcCcC--CCcc--hhhcccc
Q 029385           81 KDNHISFQCENMAIVERRLKE-MKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVVPL--AGDA--VRIRSCT  155 (194)
Q Consensus        81 g~~hiaf~v~dl~~~~~~l~~-~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~~~p~~p~--~~~~--~~~~~~~  155 (194)
                      ++.||++.|.|++++.+..++ .|..+........+ ....+.+..+++..+|+......+..+.  ...|  .+.+.+ 
T Consensus         3 ~~~hi~l~v~d~~~a~~fy~~~lG~~~~~~~~~~~~-~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~g~~h~~~~v-   80 (125)
T cd08352           3 GIHHVAIICSDYEKSKEFYVEILGFKVIREVYRPER-GSYKLDLLLNGGYQLELFSFPNPPERPSYPEACGLRHLAFSV-   80 (125)
T ss_pred             ccceEEEEcCCHHHHHHHHHHhcCCEEeeeeecCCC-CcEEEEEecCCCcEEEEEEcCCCCCCCCCCcCCCceEEEEEe-
Confidence            678999999999999999984 89987654322221 1134555666788899886554322111  1112  233444 


Q ss_pred             cccchhhhhhhhhh
Q 029385          156 STVNCNFHQQQIQQ  169 (194)
Q Consensus       156 ~~~~~~~~~~~~~~  169 (194)
                        -|++...+++..
T Consensus        81 --~d~~~~~~~l~~   92 (125)
T cd08352          81 --EDIEAAVKHLKA   92 (125)
T ss_pred             --CCHHHHHHHHHH
Confidence              567777777664

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08346 PcpA_N_like N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=95.10  E-value=0.22  Score=34.71  Aligned_cols=89  Identities=12%  Similarity=0.120  Sum_probs=53.4

Q ss_pred             CccEEEEeeCCHHHHHHHHHh-CCCeEEccceecCccceEEEEEeCC---CCCEEEEEecCCCCc-CcCCC--cchhhcc
Q 029385           81 KDNHISFQCENMAIVERRLKE-MKIDYVKSRVEEGGINVDQLFFHDP---DGSMIEICNCDVLPV-VPLAG--DAVRIRS  153 (194)
Q Consensus        81 g~~hiaf~v~dl~~~~~~l~~-~Gi~~~~~~~~~~g~~~~~~~~~DP---DG~~iEi~~~~~~p~-~p~~~--~~~~~~~  153 (194)
                      ++.|+++.|+|+++..+..++ .|.+........++.....+++.+.   .|..+++...+.... .+...  ...+...
T Consensus         1 ~i~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~hi~f~   80 (126)
T cd08346           1 GLHHVTLITRDAQETVDFYTDVLGLRLVKKTVNQDDPGTYHLFFGDGLGSPGTLLTFFEWPDAGPKGRRGPGQIHHIAFS   80 (126)
T ss_pred             CcccEEEEcCChhHhHHHHHHccCCEEeeeEeccCCCceEEEEEecCCCCCCCEEEEEecCCCCCCCCCCCCcEEEEEEE
Confidence            467999999999999999985 6988765432222112245566665   678899987644222 11111  1234444


Q ss_pred             cccccchhhhhhhhhh
Q 029385          154 CTSTVNCNFHQQQIQQ  169 (194)
Q Consensus       154 ~~~~~~~~~~~~~~~~  169 (194)
                      +.+.-+++.+.++++.
T Consensus        81 v~~~~~~~~~~~~~~~   96 (126)
T cd08346          81 VPSEASLDAWRERLRA   96 (126)
T ss_pred             cCCHHHHHHHHHHHHH
Confidence            5333356777777664

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>PF06983 3-dmu-9_3-mt: 3-demethylubiquinone-9 3-methyltransferase; PDB: 1U7I_A 1TSJ_A 1U69_D 3L20_B 3OMS_A

Probab=94.95  E-value=0.69  Score=33.09  Aligned_cols=94  Identities=18%  Similarity=0.228  Sum_probs=51.6

Q ss_pred             CCHHHHHHHHHHccCCeEeeeCCCCC-----cc----eEEEEeCCcEEEEeecCCCCCCCCCCCCCCCCccEEEEeeCC-
Q 029385           22 RSVEASLDFYQNVLGFFPIRRPGSFD-----FD----GAWLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQCEN-   91 (194)
Q Consensus        22 ~Dle~s~~FY~~vLG~~~~~~~~~~~-----~~----~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~~hiaf~v~d-   91 (194)
                      .+.+++.+||.++||-..+......+     ..    .+.+...+..+......  ...      ......++++.++| 
T Consensus        11 g~a~eA~~fY~~vf~~~~i~~~~~~~~~~~~~~~~v~ha~l~i~g~~lm~~D~~--~~~------~~~~~~sl~i~~~~~   82 (116)
T PF06983_consen   11 GNAEEALEFYKEVFGGSEIMTFGDYPDDEPEWKDKVMHAELTIGGQKLMASDGG--PDF------PFGNNISLCIECDDE   82 (116)
T ss_dssp             S-HHHHHHHHHHHSTTEEEEEEEE-TTTCTTHTTSEEEEEEEETTEEEEEEEES--TS----------TTEEEEEEESSH
T ss_pred             CCHHHHHHHHHHHcCCCEEEEEeECCCCCCCCCCcEEEEEEEECCeEEEEECCC--CCC------CCCCcEEEEEEcCCH
Confidence            58999999999999953333211110     01    11222334444433322  111      11234678888885 


Q ss_pred             --HHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEE
Q 029385           92 --MAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEIC  134 (194)
Q Consensus        92 --l~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~  134 (194)
                        +++++++|.+.|-         + .. ..-++.|--|..|.|+
T Consensus        83 ee~~~~f~~Ls~gG~---------~-~~-~~G~v~DkFGv~Wqiv  116 (116)
T PF06983_consen   83 EEIDRIFDKLSEGGQ---------W-FS-RYGWVTDKFGVSWQIV  116 (116)
T ss_dssp             HHHHHHHHHHHTTTE---------T-CC-EEEEEE-TTS-EEEEE
T ss_pred             HHHHHHHHHHHcCCC---------c-cc-eeEEEEeCCCCEEEeC
Confidence              6666788888775         1 12 6679999999999875

>cd08353 Glo_EDI_BRP_like_7 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=94.73  E-value=0.37  Score=34.87  Aligned_cols=86  Identities=13%  Similarity=0.235  Sum_probs=53.4

Q ss_pred             CccEEEEeeCCHHHHHHHHHhCCCeEEccceecC----------ccceEEEEEeCCCC-CEEEEEecCCC--CcC----c
Q 029385           81 KDNHISFQCENMAIVERRLKEMKIDYVKSRVEEG----------GINVDQLFFHDPDG-SMIEICNCDVL--PVV----P  143 (194)
Q Consensus        81 g~~hiaf~v~dl~~~~~~l~~~Gi~~~~~~~~~~----------g~~~~~~~~~DPDG-~~iEi~~~~~~--p~~----p  143 (194)
                      +++|+++.|.|+++..+...+.|..+.......+          +...+..++..|+| ..||+.+....  +..    +
T Consensus         3 ~i~Hi~i~v~Dl~~s~~FY~~LG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~iel~~~~~~~~~~~~~~~~   82 (142)
T cd08353           3 RMDNVGIVVRDLEAAIAFFLELGLELEGRAEIEGEWADRVTGLDGVRVEIAMLRTPDGHSRLELSKFHHPAVIADHRPAP   82 (142)
T ss_pred             eeeeEEEEeCCHHHHHHHHHHcCCEEccccccChHHHHHhcCCCCceEEEEEEeCCCCCceEEEEEecCCCCcCcCCCCC
Confidence            5789999999999999999989987654432111          11234556666665 58999874321  111    1


Q ss_pred             CCCcc--hhhcccccccchhhhhhhhhh
Q 029385          144 LAGDA--VRIRSCTSTVNCNFHQQQIQQ  169 (194)
Q Consensus       144 ~~~~~--~~~~~~~~~~~~~~~~~~~~~  169 (194)
                      ....|  .+...+   -|+++..+++..
T Consensus        83 ~~~~g~~hia~~v---~d~d~~~~~l~~  107 (142)
T cd08353          83 VNALGLRRVMFAV---DDIDARVARLRK  107 (142)
T ss_pred             CCCCCceEEEEEe---CCHHHHHHHHHH
Confidence            11222  234444   688888888774

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>PF14507 CppA_C: CppA C-terminal; PDB: 3E0R_D

Probab=94.58  E-value=0.098  Score=36.59  Aligned_cols=89  Identities=21%  Similarity=0.228  Sum_probs=39.8

Q ss_pred             eeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeCCcEEEEeecCCCCCCCCCCCCCCCCccEEEEeeC---
Q 029385           14 LNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQCE---   90 (194)
Q Consensus        14 i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~~hiaf~v~---   90 (194)
                      +..+.|.|.| +++.+||+++||-..-                 ..+.+.+...+.-.. .+ ...=.+.-+-|.|+   
T Consensus         6 ~e~i~LNV~d-~~~~~fy~~~f~~~~~-----------------~~l~f~ea~G~DL~~-~~-~~twDLe~Lkf~V~~~~   65 (101)
T PF14507_consen    6 FESIELNVPD-AKSQSFYQSIFGGQLP-----------------FFLTFQEAQGPDLTI-EN-NETWDLEMLKFQVPKDF   65 (101)
T ss_dssp             E-EEEEEE-T--T---S--H---HHHT-----------------TTEEEEE---CCGSS--T-TSBSSEEEEEEEES-S-
T ss_pred             EEEEEEeCCC-hhHHHHHHhccccCCC-----------------ceEEEeeccCCcccc-CC-CcEEeeEEEEEEecCcc
Confidence            4578999999 8899999998862110                 122222322221111 00 22224455778887   


Q ss_pred             CHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCE
Q 029385           91 NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSM  130 (194)
Q Consensus        91 dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~  130 (194)
                      |+.++.+++.+.++-+-.     .+   +.+...||.|.-
T Consensus        66 Dl~~L~~~le~~~~fidK-----k~---k~l~~~Dps~IE   97 (101)
T PF14507_consen   66 DLAALKSHLEEQEFFIDK-----KE---KFLVTSDPSQIE   97 (101)
T ss_dssp             -HHHHHHHTTTS-EE--T-----T----SEEEEE-TTS-E
T ss_pred             cHHHHHHHhcccceEecC-----Cc---eEEEEECCcceE
Confidence            899999999995543222     11   778888988754

>TIGR03645 glyox_marine lactoylglutathione lyase family protein

Probab=94.24  E-value=0.53  Score=35.42  Aligned_cols=88  Identities=14%  Similarity=0.099  Sum_probs=55.3

Q ss_pred             CCccEEEEeeCCHHHHHHHHHh-CCCeEEccc---eec------------C-c-cceEEEEEeCCCCCEEEEEecCCCCc
Q 029385           80 PKDNHISFQCENMAIVERRLKE-MKIDYVKSR---VEE------------G-G-INVDQLFFHDPDGSMIEICNCDVLPV  141 (194)
Q Consensus        80 ~g~~hiaf~v~dl~~~~~~l~~-~Gi~~~~~~---~~~------------~-g-~~~~~~~~~DPDG~~iEi~~~~~~p~  141 (194)
                      .++.|+++.|.|+++..+..++ .|.++....   ...            + + ...+..++..++|..||+.+.... .
T Consensus         3 ~~i~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ieL~~~~~~-~   81 (162)
T TIGR03645         3 RTFSHIGISVPDLDAAVKFYTEVLGWYLIMPPTEIVEDDSAIGEMCTDVFGEGWGSFKIAHLSTGDRIGVELFEFKNQ-E   81 (162)
T ss_pred             ceEEEEEEEeCCHHHHHHHHHHhcCCEEEeccccccCCCCCCCchhhHHhCCCcceeeEEEEecCCCCcEEEEeccCC-C
Confidence            3678999999999999999986 798764211   000            0 0 113455666678889999987542 2


Q ss_pred             CcCC-----Ccchhhcccccccchhhhhhhhhh
Q 029385          142 VPLA-----GDAVRIRSCTSTVNCNFHQQQIQQ  169 (194)
Q Consensus       142 ~p~~-----~~~~~~~~~~~~~~~~~~~~~~~~  169 (194)
                      .|..     ..|...++. ..-|++...++++.
T Consensus        82 ~~~~~~~~~~~g~~Hla~-~v~dida~~~~l~~  113 (162)
T TIGR03645        82 NPEDNFEYWKTGVFHFCV-QDPDVEGLAERIVA  113 (162)
T ss_pred             CCCcccccccccceEEEE-EcCCHHHHHHHHHH
Confidence            2221     123333333 33588888888775

Members of this protein family share homology with lactoylglutathione lyase (glyoxalase I) and are found mainly in marine members of the gammaproteobacteria, including CPS_0532 from Colwellia psychrerythraea 34H. This family excludes a well-separated, more narrowly distributed paralogous family, exemplified by CPS_3492 from C. psychrerythraea. The function is of this protein family is unknown.

>cd07241 Glo_EDI_BRP_like_3 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=93.05  E-value=1.1  Score=31.16  Aligned_cols=86  Identities=12%  Similarity=0.086  Sum_probs=50.9

Q ss_pred             ccEEEEeeCCHHHHHHHHHh-CCCeEEccce-ecCccceEEEEEeCCCCCEEEEEecCCCCcC--cCC--Ccchhhcccc
Q 029385           82 DNHISFQCENMAIVERRLKE-MKIDYVKSRV-EEGGINVDQLFFHDPDGSMIEICNCDVLPVV--PLA--GDAVRIRSCT  155 (194)
Q Consensus        82 ~~hiaf~v~dl~~~~~~l~~-~Gi~~~~~~~-~~~g~~~~~~~~~DPDG~~iEi~~~~~~p~~--p~~--~~~~~~~~~~  155 (194)
                      +.|+++.|.|+++..+...+ .|.+...... ...+.  ...|+.-.+|..+++++.+..+..  +..  +...+...+.
T Consensus         2 ~~Hi~l~v~dl~~s~~FY~~~lg~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~hi~f~v~   79 (125)
T cd07241           2 IEHVAIWTKDLERMKAFYVTYFGATSNEKYHNPRKGF--ESYFLSFDDGARLELMTRPDIAPSPNEGERTGWAHLAFSVG   79 (125)
T ss_pred             ceEEEEEecCHHHHHHHHHHHhCCEeeceEeCCCCCc--eEEEEecCCCcEEEEEcCcccCCCcccCCCCceEEEEEECC
Confidence            57999999999999998886 5887643211 11221  333454457888999875432211  111  1123444453


Q ss_pred             cccchhhhhhhhhh
Q 029385          156 STVNCNFHQQQIQQ  169 (194)
Q Consensus       156 ~~~~~~~~~~~~~~  169 (194)
                      +.-+++.+.++++.
T Consensus        80 ~~~~v~~~~~~l~~   93 (125)
T cd07241          80 SKEAVDELTERLRA   93 (125)
T ss_pred             CHHHHHHHHHHHHH
Confidence            33467788888764

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07245 Glo_EDI_BRP_like_9 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=92.61  E-value=0.94  Score=30.49  Aligned_cols=81  Identities=7%  Similarity=0.052  Sum_probs=50.1

Q ss_pred             ccEEEEeeCCHHHHHHHHH-hCCCeEEccceecCccceEEEEEeCCCCCEEEEEecCCCCcCcCC--Ccchhhccccccc
Q 029385           82 DNHISFQCENMAIVERRLK-EMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVVPLA--GDAVRIRSCTSTV  158 (194)
Q Consensus        82 ~~hiaf~v~dl~~~~~~l~-~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~~~p~~p~~--~~~~~~~~~~~~~  158 (194)
                      +.|+++.|+|++++.+... -.|......... ..   ...++..+++..++|...+.....+-.  ....+.+.+   -
T Consensus         1 i~Hi~l~v~d~~~~~~FY~~~lG~~~~~~~~~-~~---~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~v---~   73 (114)
T cd07245           1 LDHVALRVPDLEASRAFYTDVLGLEEGPRPPF-LF---PGAWLYAGDGPQLHLIEEDPPDALPEGPGRDDHIAFRV---D   73 (114)
T ss_pred             CCeEEEecCCHHHHHHHHHHccCCcccCcCCC-CC---CceEEEeCCCcEEEEEecCCCccccCCCcccceEEEEe---C
Confidence            4699999999999999887 668876543311 11   334666566668888875443211111  112344555   5


Q ss_pred             chhhhhhhhhh
Q 029385          159 NCNFHQQQIQQ  169 (194)
Q Consensus       159 ~~~~~~~~~~~  169 (194)
                      |++.+.++++.
T Consensus        74 d~~~~~~~l~~   84 (114)
T cd07245          74 DLDAFRARLKA   84 (114)
T ss_pred             CHHHHHHHHHH
Confidence            67788887774

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases.

>cd08347 PcpA_C_like C-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=92.09  E-value=1.4  Score=33.07  Aligned_cols=84  Identities=7%  Similarity=0.019  Sum_probs=51.9

Q ss_pred             CccEEEEeeCCHHHHHHHHHh-CCCeEEccceecCccceEEEEEeC-CCCCEEEEEecCCCCcCc--CCCcchhhccccc
Q 029385           81 KDNHISFQCENMAIVERRLKE-MKIDYVKSRVEEGGINVDQLFFHD-PDGSMIEICNCDVLPVVP--LAGDAVRIRSCTS  156 (194)
Q Consensus        81 g~~hiaf~v~dl~~~~~~l~~-~Gi~~~~~~~~~~g~~~~~~~~~D-PDG~~iEi~~~~~~p~~p--~~~~~~~~~~~~~  156 (194)
                      |+.||++.|.|+++..+...+ .|.++....   .+  ...++..+ .+|..|++.+....+...  ......+.+.+.+
T Consensus         1 gl~HI~i~V~Dle~s~~FY~~~LG~~~~~~~---~~--~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~l~Hiaf~v~d   75 (157)
T cd08347           1 GLHGVTLTVRDPEATAAFLTDVLGFREVGEE---GD--RVRLEEGGGGPGAVVDVLEEPDQPRGRPGAGTVHHVAFRVPD   75 (157)
T ss_pred             CcccEEEEeCCHHHHHHHHHHhcCCEEEeee---CC--EEEEEecCCCCCCEEEEEeCCCCCCCcccCCceEEEEEECCC
Confidence            578999999999999999976 598876432   11  12222222 358999998753222111  1112245666644


Q ss_pred             ccchhhhhhhhhh
Q 029385          157 TVNCNFHQQQIQQ  169 (194)
Q Consensus       157 ~~~~~~~~~~~~~  169 (194)
                      +-+++...++++.
T Consensus        76 ~~dvd~~~~~L~~   88 (157)
T cd08347          76 DEELEAWKERLEA   88 (157)
T ss_pred             HHHHHHHHHHHHH
Confidence            5557778888774

The C-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07233 Glyoxalase_I Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

Probab=91.64  E-value=2.1  Score=29.57  Aligned_cols=84  Identities=8%  Similarity=0.061  Sum_probs=51.0

Q ss_pred             ccEEEEeeCCHHHHHHHHHh-CCCeEEccceecCccceEEEEEeCCC---CCEEEEEecCCC-CcCcC-CCcchhhcccc
Q 029385           82 DNHISFQCENMAIVERRLKE-MKIDYVKSRVEEGGINVDQLFFHDPD---GSMIEICNCDVL-PVVPL-AGDAVRIRSCT  155 (194)
Q Consensus        82 ~~hiaf~v~dl~~~~~~l~~-~Gi~~~~~~~~~~g~~~~~~~~~DPD---G~~iEi~~~~~~-p~~p~-~~~~~~~~~~~  155 (194)
                      ..|+++.|.|+++..+...+ .|.+.........+ ....+++..++   +..+++...... +..+. .....+.+.+ 
T Consensus         1 ~~hv~i~v~d~~~a~~fY~~~lG~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~v-   78 (121)
T cd07233           1 FLHTMLRVKDLEKSLDFYTDVLGMKLLRRKDFPEG-KFTLVFLGYPDEDSEGVLELTYNWGTEEPYDNGNGFGHLAFAV-   78 (121)
T ss_pred             CeeEEEEecCcHHHHHHHHhccCCeEEEEEecCCC-ceEEEEecCCCCCCccEEEEEecCCCCCCcCCCCCeEEEEEEe-
Confidence            36999999999999999986 49987654322221 11334555554   578888764322 11111 1223455666 


Q ss_pred             cccchhhhhhhhhh
Q 029385          156 STVNCNFHQQQIQQ  169 (194)
Q Consensus       156 ~~~~~~~~~~~~~~  169 (194)
                        -|++.+.+++..
T Consensus        79 --~did~~~~~l~~   90 (121)
T cd07233          79 --DDVYAACERLEE   90 (121)
T ss_pred             --CCHHHHHHHHHH
Confidence              467777777664

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic gly

>PF13468 Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B

Probab=91.60  E-value=0.36  Score=36.77  Aligned_cols=84  Identities=13%  Similarity=0.209  Sum_probs=41.5

Q ss_pred             ccEEEEeeCCHHHHHHHH-HhCCCeEEccceecC-ccceEEEEEeCCCCCEEEEEecCCCCcC---c--C------CCcc
Q 029385           82 DNHISFQCENMAIVERRL-KEMKIDYVKSRVEEG-GINVDQLFFHDPDGSMIEICNCDVLPVV---P--L------AGDA  148 (194)
Q Consensus        82 ~~hiaf~v~dl~~~~~~l-~~~Gi~~~~~~~~~~-g~~~~~~~~~DPDG~~iEi~~~~~~p~~---p--~------~~~~  148 (194)
                      +.|+.+.|+|+++..+++ +..|..+........ |-....++|  +|| .|||....+....   +  +      ..+|
T Consensus         1 lDH~v~~v~dl~~a~~~~~~~lGf~~~~gg~h~~~GT~N~li~f--~~~-YlEli~i~~~~~~~~~~~~~~~~~~~~~~g   77 (175)
T PF13468_consen    1 LDHLVIAVRDLDAAVERFEQRLGFTVTPGGEHPGWGTANALIPF--GDG-YLELIAIDPEAPAPDRGRWFGLDRLAGGEG   77 (175)
T ss_dssp             EEEEEEE-TTGGG----GGGS--S--EEEEE-TTT-EEEEEEE---SSS-EEEEEEES-HHHSTGGGT-TTTHHHHT--E
T ss_pred             CCEEEEEcCCHHHHHHhhhhcceEeecCCCcCCCCccEEEEEee--CCc-eEEEEEeCCcccccccccceechhhcCCCC
Confidence            469999999999999999 888999886553332 333344444  678 9999995421111   0  0      1344


Q ss_pred             hhhcccccccchhhhhhhhhh
Q 029385          149 VRIRSCTSTVNCNFHQQQIQQ  169 (194)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~  169 (194)
                      ...+.. ..-|.+...++++.
T Consensus        78 ~~~~~l-~t~d~~~~~~~l~~   97 (175)
T PF13468_consen   78 LYGWAL-RTDDIEAVAARLRA   97 (175)
T ss_dssp             EEEEEE-E-S-HHHHHHHHHT
T ss_pred             eEEEEE-ecCCHHHHHHHHHh
Confidence            344444 44666666666664

>cd07242 Glo_EDI_BRP_like_6 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=91.16  E-value=1.6  Score=30.66  Aligned_cols=83  Identities=8%  Similarity=0.031  Sum_probs=50.5

Q ss_pred             CccEEEEeeCCHHHHHHHHHhC----CCeEEccceecCccceEEEEEeCCCCCEEEEEecCCCCc--CcC--CCcchhhc
Q 029385           81 KDNHISFQCENMAIVERRLKEM----KIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPV--VPL--AGDAVRIR  152 (194)
Q Consensus        81 g~~hiaf~v~dl~~~~~~l~~~----Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~~~p~--~p~--~~~~~~~~  152 (194)
                      ++.|+.+.|.|+++..+...+.    |.+.....   ..   ...|+...++..+++.+..+...  +..  .....+.+
T Consensus         1 ~i~Hv~i~v~d~~~~~~Fy~~~l~~~G~~~~~~~---~~---~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~g~~hia~   74 (128)
T cd07242           1 GIHHVELTVRDLERSRAFYDWLLGLLGFEEVKEW---ED---GRSWRAGDGGTYLVLQQADGESAGRHDRRNPGLHHLAF   74 (128)
T ss_pred             CCceEEEEeCCHHHHHHHHHHHHhhcCCEEEEee---cc---CceEEecCCceEEEEEecccCCCcccccCCcCeeEEEE
Confidence            4689999999999999988765    88876533   11   22344335678899987654221  111  11123445


Q ss_pred             ccccccchhhhhhhhhh
Q 029385          153 SCTSTVNCNFHQQQIQQ  169 (194)
Q Consensus       153 ~~~~~~~~~~~~~~~~~  169 (194)
                      .+.+.-|++...+++..
T Consensus        75 ~v~~~~d~~~~~~~l~~   91 (128)
T cd07242          75 RAPSREAVDELYARLAK   91 (128)
T ss_pred             EcCCHHHHHHHHHHHHH
Confidence            55233467777777663

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>PRK11478 putative lyase; Provisional

Probab=90.34  E-value=3  Score=29.21  Aligned_cols=85  Identities=12%  Similarity=0.033  Sum_probs=48.7

Q ss_pred             CccEEEEeeCCHHHHHHHHHh-CCCeEEccceecCccceEEEEEeCCCCCEEEEEecCCCCcCcC----CCcchhhcccc
Q 029385           81 KDNHISFQCENMAIVERRLKE-MKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVVPL----AGDAVRIRSCT  155 (194)
Q Consensus        81 g~~hiaf~v~dl~~~~~~l~~-~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~~~p~~p~----~~~~~~~~~~~  155 (194)
                      ++.|+++.|+|+++..+...+ .|.++.......... .....+.-.++..+|+.+.......+-    .....+.+.+ 
T Consensus         6 ~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~-~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~g~~hi~f~v-   83 (129)
T PRK11478          6 QVHHIAIIATDYAVSKAFYCDILGFTLQSEVYREARD-SWKGDLALNGQYVIELFSFPFPPERPSRPEACGLRHLAFSV-   83 (129)
T ss_pred             eecEEEEEcCCHHHHHHHHHHHhCCEecccccccccc-cceeeEecCCCcEEEEEEecCCCCCCCCCCCCceeEEEEEe-
Confidence            578999999999999999875 698875432111100 011122224567899987533221111    1112344555 


Q ss_pred             cccchhhhhhhhhh
Q 029385          156 STVNCNFHQQQIQQ  169 (194)
Q Consensus       156 ~~~~~~~~~~~~~~  169 (194)
                        -|++++.++++.
T Consensus        84 --~d~~~~~~~l~~   95 (129)
T PRK11478         84 --DDIDAAVAHLES   95 (129)
T ss_pred             --CCHHHHHHHHHH
Confidence              477777777764

>cd07255 Glo_EDI_BRP_like_12 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=90.02  E-value=2.6  Score=29.34  Aligned_cols=82  Identities=5%  Similarity=0.054  Sum_probs=50.3

Q ss_pred             CccEEEEeeCCHHHHHHHHHh-CCCeEEccceecCccceEEEEEeCCC-CCEEEEEecCCCCcCcC--CCcchhhccccc
Q 029385           81 KDNHISFQCENMAIVERRLKE-MKIDYVKSRVEEGGINVDQLFFHDPD-GSMIEICNCDVLPVVPL--AGDAVRIRSCTS  156 (194)
Q Consensus        81 g~~hiaf~v~dl~~~~~~l~~-~Gi~~~~~~~~~~g~~~~~~~~~DPD-G~~iEi~~~~~~p~~p~--~~~~~~~~~~~~  156 (194)
                      ++.|+.+.|+|+++..+...+ .|..+....   +    ..+++..++ +..+.+...+..+..+.  .....+...+.+
T Consensus         2 ~i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~---~----~~~~l~~~~~~~~l~l~~~~~~~~~~~~~~~~~hi~f~v~~   74 (125)
T cd07255           2 RIGAVTLRVADLERSLAFYQDVLGLEVLERT---D----STAVLGTGGKRPLLVLEEDPDAPPAPPGATGLYHFAILLPS   74 (125)
T ss_pred             EEEEEEEEECCHHHHHHHHHhccCcEEEEcC---C----CEEEEecCCCeEEEEEEeCCCCCcccCCCCcEEEEEEECCC
Confidence            468999999999999999986 698887542   1    234555554 57788876543221111  111233344434


Q ss_pred             ccchhhhhhhhhh
Q 029385          157 TVNCNFHQQQIQQ  169 (194)
Q Consensus       157 ~~~~~~~~~~~~~  169 (194)
                      +-+++.+.+++..
T Consensus        75 ~~~v~~~~~~l~~   87 (125)
T cd07255          75 RADLAAALRRLIE   87 (125)
T ss_pred             HHHHHHHHHHHHH
Confidence            4567777776654

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>PF00903 Glyoxalase: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily This Prosite is specific to glyoxalases This Prosite is specific to Extradiol ring-cleavage dioxygenases This prints entry is specific to bleomycin resistance protein

Probab=89.96  E-value=1.9  Score=29.69  Aligned_cols=90  Identities=9%  Similarity=0.067  Sum_probs=53.4

Q ss_pred             CccEEEEeeCCHHHHHHHHHh-CCCeEEccce-ecCccceEEEEEeCCCCCEEEEEecCCCCcCcCCC------cchhhc
Q 029385           81 KDNHISFQCENMAIVERRLKE-MKIDYVKSRV-EEGGINVDQLFFHDPDGSMIEICNCDVLPVVPLAG------DAVRIR  152 (194)
Q Consensus        81 g~~hiaf~v~dl~~~~~~l~~-~Gi~~~~~~~-~~~g~~~~~~~~~DPDG~~iEi~~~~~~p~~p~~~------~~~~~~  152 (194)
                      +++|+++.|.|++++.+-..+ .|..+..... ...+......++...+ ..+++......+......      ...+..
T Consensus         1 ~l~Hi~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~   79 (128)
T PF00903_consen    1 GLDHIAIRVKDLEKAIDFYTDVLGFRLVEESDNDGEGGDLRIAFLRIGE-GHIELFLNPSPPPRASGHSFPEHGGHHIAF   79 (128)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTTSEEEEEEEEESTTEEEEEEEEESTS-SCEEEEEEESSSSSSEEEHHHSHTSEEEEE
T ss_pred             CeEEEEEEcCCHHHHHHHHHHHhCCcEEeeeccccccccccceeecccc-cceeeeeeccccccccccccccccceeEEE
Confidence            478999999999999998885 6999887664 2222233455555544 457776654322222211      112333


Q ss_pred             ccccccchhhhhhhhhhCC
Q 029385          153 SCTSTVNCNFHQQQIQQEP  171 (194)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~  171 (194)
                      -+-+.-|+....++++...
T Consensus        80 ~~~~~~dl~~~~~~l~~~g   98 (128)
T PF00903_consen   80 LAFDVDDLDAAYERLKAQG   98 (128)
T ss_dssp             EESSHHHHHHHHHHHHHTT
T ss_pred             EeccHHHHHHHHHHHhhcC
Confidence            3423356667777777543

; InterPro: IPR004360 Glyoxalase I (4.4.1.5 from EC) (lactoylglutathione lyase) catalyzes the first step of the glyoxal pathway. S-lactoylglutathione is then converted by glyoxalase II to lactic acid []. Glyoxalase I is an ubiquitous enzyme which binds one mole of zinc per subunit. The bacterial and yeast enzymes are monomeric while the mammalian one is homodimeric. The sequence of glyoxalase I is well conserved. The domain represented by this entry is found in glyoxalase I and in other related proteins, including fosfomycin resistance proteins FosB [], FosA [], FosX [] and dioxygenases (eg. 4-hydroxyphenylpyruvate dioxygenase).; PDB: 1CJX_A 1NPB_E 3OJT_C 3OJN_A 2IG9_B 3OJJ_B 3OJK_D 1Q0C_D 1F1X_C 3BZA_B ....

>cd07249 MMCE Methylmalonyl-CoA epimerase (MMCE)

Probab=89.84  E-value=2.7  Score=29.16  Aligned_cols=84  Identities=8%  Similarity=0.007  Sum_probs=50.3

Q ss_pred             ccEEEEeeCCHHHHHHHHHh-CCCeEEccceecCccceEEEEEeCCCCCEEEEEecCCCCcCc-----CCCcc--hhhcc
Q 029385           82 DNHISFQCENMAIVERRLKE-MKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVVP-----LAGDA--VRIRS  153 (194)
Q Consensus        82 ~~hiaf~v~dl~~~~~~l~~-~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~~~p~~p-----~~~~~--~~~~~  153 (194)
                      +.|+++.|+|+++..+...+ .|..........++...+..++.. +|..++|.+........     -...+  .+.+.
T Consensus         1 ~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~-~~~~l~l~~~~~~~~~~~~~~~~~~~g~~h~~f~   79 (128)
T cd07249           1 IDHIGIAVPDLEAAIKFYRDVLGVGPWEEEEVPPEQGVRVAFLGL-GNVQIELIEPLDDDSPIAKFLEKRGEGLHHIAFE   79 (128)
T ss_pred             CcEEEEEeCCHHHHHHHHHHhhCCCCccccccCcccccEEEEEEc-CCEEEEEEEECCCCCcHHHHHhcCCCceEEEEEE
Confidence            36999999999999999986 798876543221111223445554 78889998754311100     11122  24555


Q ss_pred             cccccchhhhhhhhhh
Q 029385          154 CTSTVNCNFHQQQIQQ  169 (194)
Q Consensus       154 ~~~~~~~~~~~~~~~~  169 (194)
                      +   -|++...++++.
T Consensus        80 v---~d~~~~~~~l~~   92 (128)
T cd07249          80 V---DDIDAALARLKA   92 (128)
T ss_pred             e---CCHHHHHHHHHH
Confidence            5   467777777664

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases.

>cd07237 BphC1-RGP6_C_like C-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=88.14  E-value=4.9  Score=29.73  Aligned_cols=87  Identities=7%  Similarity=0.001  Sum_probs=49.6

Q ss_pred             CCCCccEEEEeeCCHHHHHHHHHh-CCCeEEccceec-C-ccceEEEEEe-CCCCCEEEEEecCCCCcCcCCCcchhhcc
Q 029385           78 INPKDNHISFQCENMAIVERRLKE-MKIDYVKSRVEE-G-GINVDQLFFH-DPDGSMIEICNCDVLPVVPLAGDAVRIRS  153 (194)
Q Consensus        78 ~~~g~~hiaf~v~dl~~~~~~l~~-~Gi~~~~~~~~~-~-g~~~~~~~~~-DPDG~~iEi~~~~~~p~~p~~~~~~~~~~  153 (194)
                      ...++.|+++.|+|+++..+...+ .|.++....... + +......|++ ++.+..+.+.....     ......+.+.
T Consensus         6 ~~~~l~Hi~l~v~Dl~~a~~FY~~~LGl~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~-----~~g~~Hiaf~   80 (154)
T cd07237           6 GDQGLGHVVLATPDPDEAHAFYRDVLGFRLSDEIDIPLPPGPTARVTFLHCNGRHHSLALAEGPG-----PKRIHHLMLE   80 (154)
T ss_pred             CCCccCEEEEEeCCHHHHHHHHHHccCCEEEEEEcccCCCCCcceEEEEEeCCCCCCEEEEcCCC-----CceeEEEEEE
Confidence            345789999999999999999876 798865422111 0 1011333333 45566777654321     0112235566


Q ss_pred             cccccchhhhhhhhhh
Q 029385          154 CTSTVNCNFHQQQIQQ  169 (194)
Q Consensus       154 ~~~~~~~~~~~~~~~~  169 (194)
                      +.++-+++.+.++++.
T Consensus        81 V~d~~~l~~~~~~L~~   96 (154)
T cd07237          81 VTSLDDVGRAYDRVRA   96 (154)
T ss_pred             cCCHHHHHHHHHHHHH
Confidence            6344455566666653

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the C-terminal, catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its C-terminal repeat is represented in thi

>cd07262 Glo_EDI_BRP_like_19 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=88.12  E-value=4.5  Score=28.11  Aligned_cols=81  Identities=7%  Similarity=0.004  Sum_probs=48.2

Q ss_pred             ccEEEEeeCCHHHHHHHHHh----CCCeEEccceecCccceEEEEEeCC-CCCEEEEEecCCCCcCcCCCcchhhccccc
Q 029385           82 DNHISFQCENMAIVERRLKE----MKIDYVKSRVEEGGINVDQLFFHDP-DGSMIEICNCDVLPVVPLAGDAVRIRSCTS  156 (194)
Q Consensus        82 ~~hiaf~v~dl~~~~~~l~~----~Gi~~~~~~~~~~g~~~~~~~~~DP-DG~~iEi~~~~~~p~~p~~~~~~~~~~~~~  156 (194)
                      +.|+.+.|.|+++..+..++    .|.......   .+   ..+++..+ .+..+.++........+-.....+.+.+.+
T Consensus         1 l~hv~l~v~d~~~s~~FY~~~f~~lg~~~~~~~---~~---~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~hi~f~v~~   74 (123)
T cd07262           1 IDHVTLGVNDLERARAFYDAVLAPLGIKRVMED---GP---GAVGYGKGGGGPDFWVTKPFDGEPATAGNGTHVAFAAPS   74 (123)
T ss_pred             CcEEEEecCcHHHHHHHHHHHHhhcCceEEeec---CC---ceeEeccCCCCceEEEeccccCCCCCCCCceEEEEECCC
Confidence            36999999999999988887    588765432   11   23445555 467788876432211111122346677744


Q ss_pred             ccchhhhhhhhh
Q 029385          157 TVNCNFHQQQIQ  168 (194)
Q Consensus       157 ~~~~~~~~~~~~  168 (194)
                      +-+++...+++.
T Consensus        75 ~~~v~~~~~~~~   86 (123)
T cd07262          75 REAVDAFHAAAL   86 (123)
T ss_pred             HHHHHHHHHHHH
Confidence            445666666644

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07263 Glo_EDI_BRP_like_16 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=88.00  E-value=5.5  Score=26.97  Aligned_cols=80  Identities=8%  Similarity=0.081  Sum_probs=47.8

Q ss_pred             EEEEeeCCHHHHHHHHHh-CCCeEEccceecCccceEEEEEeCCCC--CEEEEEecCCCCc---CcCCCcchhhcccccc
Q 029385           84 HISFQCENMAIVERRLKE-MKIDYVKSRVEEGGINVDQLFFHDPDG--SMIEICNCDVLPV---VPLAGDAVRIRSCTST  157 (194)
Q Consensus        84 hiaf~v~dl~~~~~~l~~-~Gi~~~~~~~~~~g~~~~~~~~~DPDG--~~iEi~~~~~~p~---~p~~~~~~~~~~~~~~  157 (194)
                      |+++.|.|+++..+..++ .|.++........+  ...+.+.++++  ..+++......+.   .+-.....+.+.+   
T Consensus         1 Hv~l~v~d~~~~~~fY~~~lG~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v---   75 (119)
T cd07263           1 LVSLYVDDQDKALAFYTEKLGFEVREDVPMGGG--FRWVTVAPPGSPETSLVLAPPANPAAMSGLQPGGTPGLVLAT---   75 (119)
T ss_pred             CceEEeCCHHHHHHHHHhccCeEEEEeeccCCC--cEEEEEeCCCCCeeEEEEeCCCCccccccccCCCceEEEEEe---
Confidence            799999999999999986 89987754321122  24556666654  4566554332210   1111222455555   


Q ss_pred             cchhhhhhhhh
Q 029385          158 VNCNFHQQQIQ  168 (194)
Q Consensus       158 ~~~~~~~~~~~  168 (194)
                      -|++...+++.
T Consensus        76 ~di~~~~~~l~   86 (119)
T cd07263          76 DDIDATYEELK   86 (119)
T ss_pred             hHHHHHHHHHH
Confidence            46777777765

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>PF13670 PepSY_2: Peptidase propeptide and YPEB domain This Prosite motif covers only the active site

Probab=87.69  E-value=2.8  Score=27.88  Aligned_cols=45  Identities=13%  Similarity=0.203  Sum_probs=35.2

Q ss_pred             CHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEecC
Q 029385           91 NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD  137 (194)
Q Consensus        91 dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~  137 (194)
                      +.+++.+.+.+.|..+..-..+..+  .+.+...|.||+.+||.-.+
T Consensus        30 ~~~~~~~~l~~~G~~v~~ve~~~~g--~yev~~~~~dG~~~ev~vD~   74 (83)
T PF13670_consen   30 SIEQAVAKLEAQGYQVREVEFDDDG--CYEVEARDKDGKKVEVYVDP   74 (83)
T ss_pred             CHHHHHHHHHhcCCceEEEEEcCCC--EEEEEEEECCCCEEEEEEcC
Confidence            7899999999999966654432333  37889999999999998653

This is family M4 in the peptidase classification.

>cd06587 Glo_EDI_BRP_like This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

Probab=87.21  E-value=5.6  Score=26.09  Aligned_cols=79  Identities=9%  Similarity=0.124  Sum_probs=49.8

Q ss_pred             EEEEeeCCHHHHHHHHHh-CCCeEEccceecCccceEEEEEeCCCCCEEEEEecCCCCcC-cCCCcchhhcccccccchh
Q 029385           84 HISFQCENMAIVERRLKE-MKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVV-PLAGDAVRIRSCTSTVNCN  161 (194)
Q Consensus        84 hiaf~v~dl~~~~~~l~~-~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~~~p~~-p~~~~~~~~~~~~~~~~~~  161 (194)
                      |+.+.|.|++++.+.+.+ .|.+....... .  .....++.++ +..++|....+.... .-.....+.+.+   -|++
T Consensus         1 Hi~i~~~d~~~~~~fy~~~lg~~~~~~~~~-~--~~~~~~~~~~-~~~i~l~~~~~~~~~~~~~~~~~~~~~v---~~~~   73 (112)
T cd06587           1 HVGLTVSDLEAAVAFYEEVLGFEVLFRNGN-G--GAEFAVLGLG-GTRLELFEGDEPAPAPSGGGGVHLAFEV---DDVD   73 (112)
T ss_pred             CcceeeCCHHHHHHHHHhccCCEEEEeecc-C--CEEEEEEecC-CceEEEecCCCCCCcccCCCeeEEEEEC---CCHH
Confidence            789999999999999997 89887764421 1  1255566665 889999986543221 111112334444   4556


Q ss_pred             hhhhhhhh
Q 029385          162 FHQQQIQQ  169 (194)
Q Consensus       162 ~~~~~~~~  169 (194)
                      .+.+++..
T Consensus        74 ~~~~~l~~   81 (112)
T cd06587          74 AAYERLKA   81 (112)
T ss_pred             HHHHHHHH
Confidence            67777653

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain clas

>cd07250 HPPD_C_like C-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HppD) and hydroxymandelate Synthase (HmaS)

Probab=86.68  E-value=3.5  Score=32.00  Aligned_cols=86  Identities=12%  Similarity=0.004  Sum_probs=54.3

Q ss_pred             CccEEEEeeC--CHHHHHHHHHh-CCCeEEccceecC-ccceEEEEEeCCCC-CEEEEEecCCC--C--cC---cC---C
Q 029385           81 KDNHISFQCE--NMAIVERRLKE-MKIDYVKSRVEEG-GINVDQLFFHDPDG-SMIEICNCDVL--P--VV---PL---A  145 (194)
Q Consensus        81 g~~hiaf~v~--dl~~~~~~l~~-~Gi~~~~~~~~~~-g~~~~~~~~~DPDG-~~iEi~~~~~~--p--~~---p~---~  145 (194)
                      ++.|+++.|+  |++++.+...+ .|.+......... ..+.+...+..|+| ..++|.+....  +  ..   ..   .
T Consensus         3 ~iDHv~i~V~~~dl~~a~~fY~~~LGf~~~~~~~~~~~~~~~~s~~l~~~~g~i~l~L~~~~~~~~~s~~~~fl~~~~G~   82 (191)
T cd07250           3 RIDHVVGNVPDGEMDSWVDFYRKVLGFHRFWSFDIEDPYSGLRSRVLASPDGKIRIPLNEPASGKRKSQIQEFLEYYGGA   82 (191)
T ss_pred             eeeEEEeecChhHHHHHHHHHHHhhCCceeeEEccCcCcccEEEEEEECCCCcEEEEEecCCCCCCccHHHHHHHHhCCC
Confidence            5789999999  99999999865 7988665332111 12346777888865 56788765431  1  00   01   1


Q ss_pred             Ccchhhcccccccchhhhhhhhhh
Q 029385          146 GDAVRIRSCTSTVNCNFHQQQIQQ  169 (194)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~  169 (194)
                      +...+.+.|   -|+....++++.
T Consensus        83 Gv~HIAf~v---dDI~~~~~~L~~  103 (191)
T cd07250          83 GVQHIALAT---DDIFATVAALRA  103 (191)
T ss_pred             ceeEEEEEC---CCHHHHHHHHHH
Confidence            122466777   577777777664

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of 4-hydroxyphenylpyruvate to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two,

>cd08342 HPPD_N_like N-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HPPD) and hydroxymandelate Synthase (HmaS)

Probab=86.24  E-value=6.9  Score=28.06  Aligned_cols=81  Identities=7%  Similarity=-0.022  Sum_probs=47.6

Q ss_pred             ccEEEEeeCCHHHHHHHHHh-CCCeEEccceecCccceEEEEEeCCCCCEEEEEecCCCCc--C---cCCCcc--hhhcc
Q 029385           82 DNHISFQCENMAIVERRLKE-MKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPV--V---PLAGDA--VRIRS  153 (194)
Q Consensus        82 ~~hiaf~v~dl~~~~~~l~~-~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~~~p~--~---p~~~~~--~~~~~  153 (194)
                      +.|+++.|+|+++..+..++ .|.++...... .+  ....++. .++..+++....+...  .   .....+  .+.+.
T Consensus         1 ~~Hi~i~V~D~e~s~~FY~~vLGf~~~~~~~~-~~--~~~~~~~-~g~~~l~l~~~~~~~~~~~~~~~~~~~g~~hia~~   76 (136)
T cd08342           1 FDHVEFYVGNAKQLASWFSTKLGFEPVAYHGS-ED--KASYLLR-QGDINFVLNSPLNSFAPVADFLEKHGDGVCDVAFR   76 (136)
T ss_pred             CeEEEEEeCCHHHHHHHHHHhcCCeEEEecCC-Cc--eEEEEEE-cCCEEEEEecCCCCCCchHHHHHhcCCceEEEEEE
Confidence            36999999999999999998 89987654311 11  1333343 3445566654322111  0   011122  34566


Q ss_pred             cccccchhhhhhhhhh
Q 029385          154 CTSTVNCNFHQQQIQQ  169 (194)
Q Consensus       154 ~~~~~~~~~~~~~~~~  169 (194)
                      +   -|+++..+++..
T Consensus        77 V---~Dvda~~~~l~~   89 (136)
T cd08342          77 V---DDAAAAYERAVA   89 (136)
T ss_pred             e---CCHHHHHHHHHH
Confidence            6   578888888763

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of HPP to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two, instead of three, su

>PLN03042 Lactoylglutathione lyase; Provisional

Probab=85.59  E-value=11  Score=29.15  Aligned_cols=88  Identities=9%  Similarity=-0.049  Sum_probs=53.1

Q ss_pred             CCCCCccEEEEeeCCHHHHHHHHH-hCCCeEEccceecCccceEEEEEeC-------------------CCCCEEEEEec
Q 029385           77 NINPKDNHISFQCENMAIVERRLK-EMKIDYVKSRVEEGGINVDQLFFHD-------------------PDGSMIEICNC  136 (194)
Q Consensus        77 ~~~~g~~hiaf~v~dl~~~~~~l~-~~Gi~~~~~~~~~~g~~~~~~~~~D-------------------PDG~~iEi~~~  136 (194)
                      ..+-.++|++|.|.|+++..+..+ -.|.++........+ . ..++|..                   ..+..|||.+.
T Consensus        23 ~~~~~~~Ht~i~V~Dle~Si~FY~~vLG~~~~~r~~~~~~-~-~~~~fl~~~~~~~~~~~~~~~~~~l~~~~~~lEL~~~  100 (185)
T PLN03042         23 TKGYIMQQTMFRIKDPKASLDFYSRVLGMSLLKRLDFPEM-K-FSLYFLGYEDSETAPTDPPERTVWTFGRKATIELTHN  100 (185)
T ss_pred             CCCcEEEEEEEeeCCHHHHHHHHHhhcCCEEEEEEEcCCC-c-eEEEEEecCCcccCCcchhhcccccccCCCEEEEEEc
Confidence            445578999999999999999887 579987665322221 1 3344432                   13569999874


Q ss_pred             CCCCcCc----C-------CCcchhhcccccccchhhhhhhhhh
Q 029385          137 DVLPVVP----L-------AGDAVRIRSCTSTVNCNFHQQQIQQ  169 (194)
Q Consensus       137 ~~~p~~p----~-------~~~~~~~~~~~~~~~~~~~~~~~~~  169 (194)
                      ......|    +       .+...+...+   -|++...++++.
T Consensus       101 ~~~~~~p~~~~~~~~~~~~~G~~Hlaf~V---~Dvd~~~~~L~~  141 (185)
T PLN03042        101 WGTESDPEFKGYHNGNSDPRGFGHIGITV---DDVYKACERFEK  141 (185)
T ss_pred             CCCcccccccccccCCCCCCCccEEEEEc---CCHHHHHHHHHH
Confidence            3211101    1       1223355566   467777777664

>cd08344 MhqB_like_N N-terminal domain of MhqB, a type I extradiol dioxygenase, and similar proteins

Probab=84.95  E-value=5.9  Score=27.19  Aligned_cols=75  Identities=7%  Similarity=0.055  Sum_probs=44.0

Q ss_pred             CccEEEEeeCCHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCC-EEEEEecCCCCcCcCCCcchhhcccccccc
Q 029385           81 KDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGS-MIEICNCDVLPVVPLAGDAVRIRSCTSTVN  159 (194)
Q Consensus        81 g~~hiaf~v~dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~-~iEi~~~~~~p~~p~~~~~~~~~~~~~~~~  159 (194)
                      ++.|+++.|.|++++.+.....|..+....   +    ...++.+..+. .+.+....   ...+   ..+.+.+ ..-|
T Consensus         2 ~i~hv~l~v~d~~~s~~FY~~lG~~~~~~~---~----~~~~~~~~~~~~~~~~~~~~---~~~~---~~~~~~~-~~~d   67 (112)
T cd08344           2 SIDHFALEVPDLEVARRFYEAFGLDVREEG---D----GLELRTAGNDHRWARLLEGA---RKRL---AYLSFGI-FEDD   67 (112)
T ss_pred             ceeEEEEecCCHHHHHHHHHHhCCcEEeec---C----ceEEEecCCCceEEEeecCC---CCce---eeEEEEe-Ehhh
Confidence            568999999999999999988898775422   1    11122222233 33343321   1111   1223444 4468


Q ss_pred             hhhhhhhhhh
Q 029385          160 CNFHQQQIQQ  169 (194)
Q Consensus       160 ~~~~~~~~~~  169 (194)
                      ++.+.++++.
T Consensus        68 ~~~~~~~l~~   77 (112)
T cd08344          68 FAAFARHLEA   77 (112)
T ss_pred             HHHHHHHHHH
Confidence            8888888775

This subfamily contains the N-terminal, non-catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>PRK11700 hypothetical protein; Provisional

Probab=84.74  E-value=12  Score=29.19  Aligned_cols=75  Identities=17%  Similarity=0.138  Sum_probs=48.5

Q ss_pred             ceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEe-------CCcEEEEeecCCCCCCCCCCCCCCCCccE
Q 029385           12 KSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFN-------YGMGIHLLKSEEPDNLPKAGKNINPKDNH   84 (194)
Q Consensus        12 ~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~-------~g~~~~l~~~~~~~~~~~~~~~~~~g~~h   84 (194)
                      -.++||++.|++.+.+.+|-+..+-.-..-....-.+.-..++.       .+..+..++...|....    ....|.-|
T Consensus        38 ~~~DHialR~n~~~tAe~w~~~l~~~G~llSen~INGRPI~l~~L~qPl~~~~w~I~cvELP~P~~k~----Yp~eGWEH  113 (187)
T PRK11700         38 LEADHIALRCNQNETAERWRQGFLQCGELLSENIINGRPICLFELDQPLQVGHWSIDCVELPYPGEKR----YPHEGWEH  113 (187)
T ss_pred             ccCcEEEEeeCCHHHHHHHHHHHHHhchhhhccccCCeeEEEEEcCCCceeCCcEEEEEEeCCCCCCC----CCCCCceE
Confidence            35789999999999999999886655332221111112222222       24567788877765422    44679999


Q ss_pred             EEEeeC
Q 029385           85 ISFQCE   90 (194)
Q Consensus        85 iaf~v~   90 (194)
                      |-|.++
T Consensus       114 IElVlp  119 (187)
T PRK11700        114 IELVLP  119 (187)
T ss_pred             EEEEec
Confidence            999998

>cd08364 FosX FosX, a fosfomycin resistance protein, catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1

Probab=84.37  E-value=7.4  Score=27.75  Aligned_cols=84  Identities=15%  Similarity=0.061  Sum_probs=48.1

Q ss_pred             CccEEEEeeCCHHHHHHHHHh-CCCeEEccceecCccceEEEEEeCCCCCEEEEEecCCCCcCcCCCcchhhcccccccc
Q 029385           81 KDNHISFQCENMAIVERRLKE-MKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVVPLAGDAVRIRSCTSTVN  159 (194)
Q Consensus        81 g~~hiaf~v~dl~~~~~~l~~-~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~~~p~~p~~~~~~~~~~~~~~~~  159 (194)
                      ++.|+++.|+|+++..+...+ .|..................++. -.|..+++.+... +..+  ....+.+.+ +.-+
T Consensus         4 ~i~hv~l~V~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~-~~~~~i~l~~~~~-~~~~--~~~Hiaf~v-~~~~   78 (131)
T cd08364           4 GLSHITLIVKDLNKTTAFLQNIFNAREVYSSGDKTFSLSKEKFFL-IGGLWIAIMEGDS-LQER--TYNHIAFKI-SDSD   78 (131)
T ss_pred             cEeEEEEEeCCHHHHHHHHHHHhCCeeEEecccccccccceeEEE-cCCeEEEEecCCC-CCCC--CceEEEEEc-CHHH
Confidence            678999999999999999876 79865443211100000111222 2357788875432 2111  112355666 3347


Q ss_pred             hhhhhhhhhh
Q 029385          160 CNFHQQQIQQ  169 (194)
Q Consensus       160 ~~~~~~~~~~  169 (194)
                      ++.+.++++.
T Consensus        79 ld~~~~~l~~   88 (131)
T cd08364          79 VDEYTERIKA   88 (131)
T ss_pred             HHHHHHHHHH
Confidence            8888887763

This subfamily family contains FosX, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of the configuration at C1 in the presence of Mn(II). The hydrated fosfomycin loses the inhibition activity. FosX is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd07268 Glo_EDI_BRP_like_4 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=84.35  E-value=15  Score=27.51  Aligned_cols=73  Identities=14%  Similarity=0.139  Sum_probs=47.4

Q ss_pred             eeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEe-------CCcEEEEeecCCCCCCCCCCCCCCCCccEEE
Q 029385           14 LNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFN-------YGMGIHLLKSEEPDNLPKAGKNINPKDNHIS   86 (194)
Q Consensus        14 i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~-------~g~~~~l~~~~~~~~~~~~~~~~~~g~~hia   86 (194)
                      ++||+|.|++.+.+.+|-+..+..-..-....-...-..++.       .+..+..++...|....    ....|.-||-
T Consensus         2 ~DHialR~n~~~~A~~w~~~l~~~G~llSen~INGRPI~l~~L~qPl~~~~~~I~cvELP~P~~k~----Yp~eGWEHIE   77 (149)
T cd07268           2 IDHIALRVNENQTAERWKEGLLQCGELLSENEINGRPIALIKLEKPLQFAGWSISIVELPFPKDKK----YPQEGWEHIE   77 (149)
T ss_pred             CceEEEeeCCHHHHHHHHHHHHHhchhhhccccCCeeEEEEEcCCCceeCCcEEEEEEeCCCCCCC----CCCCCceEEE
Confidence            689999999999999999887765332221111112222222       24567788877665422    4467999999


Q ss_pred             EeeC
Q 029385           87 FQCE   90 (194)
Q Consensus        87 f~v~   90 (194)
                      |.++
T Consensus        78 ~Vlp   81 (149)
T cd07268          78 IVIP   81 (149)
T ss_pred             EEec
Confidence            9998

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08348 BphC2-C3-RGP6_C_like The single-domain 2,3-dihydroxybiphenyl 1,2-dioxygenases (BphC, EC 1

Probab=84.28  E-value=9  Score=27.03  Aligned_cols=83  Identities=8%  Similarity=0.028  Sum_probs=48.3

Q ss_pred             CccEEEEeeCCHHHHHHHHHh-CCCeEEccceecCccceEEEEEeCC--CCCEEEEEecCCCCc-CcCCCcchhhccccc
Q 029385           81 KDNHISFQCENMAIVERRLKE-MKIDYVKSRVEEGGINVDQLFFHDP--DGSMIEICNCDVLPV-VPLAGDAVRIRSCTS  156 (194)
Q Consensus        81 g~~hiaf~v~dl~~~~~~l~~-~Gi~~~~~~~~~~g~~~~~~~~~DP--DG~~iEi~~~~~~p~-~p~~~~~~~~~~~~~  156 (194)
                      ++.|+.+.|+|+++..+...+ .|..+....   .+.  ...|+..+  .+..+.+........ .+-.....+.+.+.+
T Consensus         1 ~i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~---~~~--~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~~   75 (134)
T cd08348           1 RLSHVVLYVRDLEAMVRFYRDVLGFTVTDRG---PLG--GLVFLSRDPDEHHQIALITGRPAAPPPGPAGLNHIAFEVDS   75 (134)
T ss_pred             CeeEEEEEecCHHHHHHHHHHhcCCEEEeec---cCC--cEEEEEecCCCceEEEEEecCCCCCCCCCCCceEEEEEeCC
Confidence            357999999999999999986 798876432   111  33455543  356788876543211 111122235566634


Q ss_pred             ccchhhhhhhhh
Q 029385          157 TVNCNFHQQQIQ  168 (194)
Q Consensus       157 ~~~~~~~~~~~~  168 (194)
                      +-++..+.+++.
T Consensus        76 ~~~v~~~~~~l~   87 (134)
T cd08348          76 LDDLRDLYERLR   87 (134)
T ss_pred             HHHHHHHHHHHH
Confidence            334455666655

13.11.39) from Rhodococcus globerulus P6, BphC2-RGP6 and BphC3-RGP6, and similar proteins. This subfamily contains Rhodococcus globerulus P6 BphC2-RGP6 and BphC3-RGP6, and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, yielding 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid. This is the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Most type I extradiol dioxygenases are activated by Fe(II). Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC2-RGP6 and BphC3-RGP6 are

>TIGR03081 metmalonyl_epim methylmalonyl-CoA epimerase

Probab=83.53  E-value=10  Score=26.29  Aligned_cols=83  Identities=6%  Similarity=0.042  Sum_probs=48.3

Q ss_pred             ccEEEEeeCCHHHHHHHHH-hCCCeEEccceecCccceEEEEEeCCCCCEEEEEecCCC--CcC---cCCCcc--hhhcc
Q 029385           82 DNHISFQCENMAIVERRLK-EMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVL--PVV---PLAGDA--VRIRS  153 (194)
Q Consensus        82 ~~hiaf~v~dl~~~~~~l~-~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~~~--p~~---p~~~~~--~~~~~  153 (194)
                      +.|+++.|.|++++.+..+ -.|.+...... ..... ..+++..+++..++|......  +..   +....+  .+.+.
T Consensus         2 i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~-~~~~~-~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~g~~~i~~~   79 (128)
T TIGR03081         2 IDHVGIAVPDLEEAAKLYEDVLGAHVSHIEE-VPEQG-VKVVFIALGNTKVELLEPLGEDSPIAKFLEKNGGGIHHIAIE   79 (128)
T ss_pred             CCEEEEEeCCHHHHHHHHHHHhCCCCcccee-CCCCC-cEEEEEecCCEEEEEEecCCCCChHHHHHhcCCCceEEEEEE
Confidence            5799999999999999998 46988654321 11111 233444345678998864221  111   111112  34455


Q ss_pred             cccccchhhhhhhhhh
Q 029385          154 CTSTVNCNFHQQQIQQ  169 (194)
Q Consensus       154 ~~~~~~~~~~~~~~~~  169 (194)
                      +   -|++...++++.
T Consensus        80 v---~di~~~~~~l~~   92 (128)
T TIGR03081        80 V---DDIEAALETLKE   92 (128)
T ss_pred             c---CCHHHHHHHHHH
Confidence            5   477777777664

Members of this protein family are the enzyme methylmalonyl-CoA epimerase (EC 5.1.99.1), also called methylmalonyl-CoA racemase. This enzyme converts (2R)-methylmalonyl-CoA to (2S)-methylmalonyl-CoA, which is then a substrate for methylmalonyl-CoA mutase (TIGR00642). It is known in bacteria, archaea, and as a mitochondrial protein in animals. It is closely related to lactoylglutathione lyase (TIGR00068), which is also called glyoxylase I, and is also a homodimer.

>PLN02367 lactoylglutathione lyase

Probab=83.21  E-value=7.3  Score=31.49  Aligned_cols=54  Identities=17%  Similarity=0.341  Sum_probs=37.1

Q ss_pred             ceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcc-eEEEEe-CCcEEEEeecC
Q 029385           12 KSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFD-GAWLFN-YGMGIHLLKSE   66 (194)
Q Consensus        12 ~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~-~~~~~~-~g~~~~l~~~~   66 (194)
                      .+++|++|.|.|++++.+..++ .|.++...+...... ..|+.. .|.-+++++..
T Consensus       168 ~G~~HIaf~VdDVdaa~erL~a-~Gv~~v~~P~~g~~~riaFIkDPDGn~IEL~e~~  223 (233)
T PLN02367        168 RGFGHIGITVDDVYKACERFEE-LGVEFVKKPNDGKMKGIAFIKDPDGYWIEIFDLK  223 (233)
T ss_pred             CCceEEEEEcCCHHHHHHHHHH-CCCEEEeCCccCCceEEEEEECCCCCEEEEEecc
Confidence            4799999999999999999987 999988655422211 123322 34566776654

>PF06185 YecM: YecM protein; InterPro: IPR010393 This family consists of several bacterial YecM proteins of unknown function

Probab=82.24  E-value=8.7  Score=29.92  Aligned_cols=75  Identities=19%  Similarity=0.123  Sum_probs=42.5

Q ss_pred             ceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEE-------EeCCcEEEEeecCCCCCCCCCCCCCCCCccE
Q 029385           12 KSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWL-------FNYGMGIHLLKSEEPDNLPKAGKNINPKDNH   84 (194)
Q Consensus        12 ~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~-------~~~g~~~~l~~~~~~~~~~~~~~~~~~g~~h   84 (194)
                      -.++||++.|++.+.+.+|-+..+..-..-....-.+.-.++       ...+..+.+++.+.|....    ....|.-|
T Consensus        33 ~~~DHialRvn~~~~A~~~~~~l~~~G~llSen~INGRPI~l~~L~qPL~~~~~~I~~vELP~P~~K~----Yp~eGWEH  108 (185)
T PF06185_consen   33 YEIDHIALRVNSNETAERWKQALLQCGELLSENMINGRPICLFKLNQPLQFGGWSIDCVELPYPKDKR----YPQEGWEH  108 (185)
T ss_dssp             -EEEEEEEE-S-HHHHHHHHHHHTTTEEEEEEEEETTEEEEEEEEEEEEEETTEEEEEEEEE---SS------SS-EEEE
T ss_pred             cCCcEEEEecCCHHHHHHHHHHHHHhChhhhhceeCCeeEEEEEcCCchhcCCeeEEEEEeCCCCCCC----CCCCCceE
Confidence            357999999999999999999887764333221111111222       2235568888887665422    44679999


Q ss_pred             EEEeeC
Q 029385           85 ISFQCE   90 (194)
Q Consensus        85 iaf~v~   90 (194)
                      |-|.++
T Consensus       109 IE~Vip  114 (185)
T PF06185_consen  109 IEFVIP  114 (185)
T ss_dssp             EEEE--
T ss_pred             EEEEec
Confidence            999998

; PDB: 1K4N_A.

>cd07235 MRD Mitomycin C resistance protein (MRD)

Probab=81.67  E-value=11  Score=26.01  Aligned_cols=83  Identities=8%  Similarity=0.049  Sum_probs=46.5

Q ss_pred             ccEEEEeeCCHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEecCC----CCcCc--CCCcchhhcccc
Q 029385           82 DNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV----LPVVP--LAGDAVRIRSCT  155 (194)
Q Consensus        82 ~~hiaf~v~dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~~----~p~~p--~~~~~~~~~~~~  155 (194)
                      +.|+++.|+|+++..+.....|.++....   ...  ....+..++|..+.+.....    .+..+  ......+...|-
T Consensus         1 ~~~i~l~V~D~~~a~~FY~~LGf~~~~~~---~~~--~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~   75 (122)
T cd07235           1 LDAVGIVVADMAKSLDFYRRLGFDFPEEA---DDE--PHVEAVLPGGVRLAWDTVESIRSFTPGWTPTGGHRIALAFLCE   75 (122)
T ss_pred             CceEEEEeccHHHHHHHHHHhCceecCCc---CCC--CcEEEEeCCCEEEEEEcccceeeecCCCCCCCCCcEEEEEEcC
Confidence            36899999999999999988898764322   111  22334445566665543211    11121  111122334452


Q ss_pred             cccchhhhhhhhhh
Q 029385          156 STVNCNFHQQQIQQ  169 (194)
Q Consensus       156 ~~~~~~~~~~~~~~  169 (194)
                      +.-|++.+.++++.
T Consensus        76 ~~~dvd~~~~~l~~   89 (122)
T cd07235          76 TPAEVDALYAELVG   89 (122)
T ss_pred             CHHHHHHHHHHHHH
Confidence            33478888888764

Mitomycin C (MC) is a naturally occurring antibiotic, and antitumor agent used in the treatment of cancer. Its antitumor activity is exerted primarily through monofunctional and bifunctional alkylation of DNA. MRD binds to MC and functions as a component of the MC exporting system. MC is bound to MRD by a stacking interaction between a His and a Trp. MRD adopts a structural fold similar to bleomycin resistance protein, glyoxalase I, and extradiol dioxygenases; and it has binding sites at an identical location to binding sites in these evolutionarily related enzymes.

>cd08358 Glo_EDI_BRP_like_21 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=81.10  E-value=18  Score=26.15  Aligned_cols=73  Identities=11%  Similarity=0.042  Sum_probs=43.6

Q ss_pred             CccEEEEeeCCHHHHHHHHH-hCCCeEEccceecCc---------cceEE-EEEe---CCCCCEEEEEecCCCCcCcCCC
Q 029385           81 KDNHISFQCENMAIVERRLK-EMKIDYVKSRVEEGG---------INVDQ-LFFH---DPDGSMIEICNCDVLPVVPLAG  146 (194)
Q Consensus        81 g~~hiaf~v~dl~~~~~~l~-~~Gi~~~~~~~~~~g---------~~~~~-~~~~---DPDG~~iEi~~~~~~p~~p~~~  146 (194)
                      ...|+++.|.|+++..+-.. ..|.+.........+         .+... +++.   +..+..+|+.........+...
T Consensus         2 ~~~Hv~irV~DlerSi~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~lEL~~n~~~~~~~~g~   81 (127)
T cd08358           2 RALHFVFKVGNRNKTIKFYREVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMIGYGPEDDHFVVELTYNYGIGDYELGN   81 (127)
T ss_pred             ceEEEEEEeCCHHHHHHHHHHhcCCEEEeeecCccccccccccCCCCcEEEEEEecCCCCCccEEEeEecCCCCCCCCCC
Confidence            46799999999999999996 479987653311110         01122 2232   3467789999644333234432


Q ss_pred             cchhhccc
Q 029385          147 DAVRIRSC  154 (194)
Q Consensus       147 ~~~~~~~~  154 (194)
                       +.+.++.
T Consensus        82 -~~~hlav   88 (127)
T cd08358          82 -DFLGITI   88 (127)
T ss_pred             -CEEEEEE
Confidence             4455555

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>PRK04101 fosfomycin resistance protein FosB; Provisional

Probab=80.49  E-value=12  Score=26.89  Aligned_cols=80  Identities=14%  Similarity=0.152  Sum_probs=48.5

Q ss_pred             CccEEEEeeCCHHHHHHHHH-hCCCeEEccceecCccceEEEEEeCCCCCEEEEEecCCCCcCcC-CCcchhhccccccc
Q 029385           81 KDNHISFQCENMAIVERRLK-EMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVVPL-AGDAVRIRSCTSTV  158 (194)
Q Consensus        81 g~~hiaf~v~dl~~~~~~l~-~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~~~p~~p~-~~~~~~~~~~~~~~  158 (194)
                      ++.|+++.|+|+++..+... ..|.++....    +   ...++.- +|..+.+...+..+.... ..-..+.+.+ ..-
T Consensus         4 ~i~hi~L~v~Dl~~s~~FY~~~lG~~~~~~~----~---~~~~~~~-~g~~l~l~~~~~~~~~~~~~~~~hiaf~v-~~~   74 (139)
T PRK04101          4 GINHICFSVSNLEKSIEFYEKVLGAKLLVKG----R---KTAYFDL-NGLWIALNEEKDIPRNEIHQSYTHIAFSI-EEE   74 (139)
T ss_pred             cEEEEEEEecCHHHHHHHHHhccCCEEEeec----C---eeEEEec-CCeEEEeeccCCCCCccCCCCeeEEEEEe-cHH
Confidence            57899999999999999987 4788765321    1   2344443 567777754432222111 1112345555 445


Q ss_pred             chhhhhhhhhh
Q 029385          159 NCNFHQQQIQQ  169 (194)
Q Consensus       159 ~~~~~~~~~~~  169 (194)
                      |++.+.+++.+
T Consensus        75 dv~~~~~~l~~   85 (139)
T PRK04101         75 DFDHWYQRLKE   85 (139)
T ss_pred             HHHHHHHHHHH
Confidence            78888777664

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	194
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	1e-32
3ghj_A	141	Putative integron gene cassette protein; integron	2e-31
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	2e-31
2p25_A	126	Glyoxalase family protein; structural genomics, MC	3e-30
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	4e-28
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	1e-27
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	2e-27
1nki_A	135	Probable fosfomycin resistance protein; potassium	2e-27
3huh_A	152	Virulence protein STM3117; structural genomics, ny	3e-27
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	2e-26
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	1e-25
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	3e-24
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	2e-22
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	8e-22
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	1e-21
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	2e-21
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	2e-19
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	4e-18
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	2e-17
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	5e-17
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	9e-15
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	6e-09
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	2e-14
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	3e-14
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	1e-13
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	1e-13
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	6e-09
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	2e-13
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	2e-13
2i7r_A	118	Conserved domain protein; structural genomics cons	4e-13
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	2e-12
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	2e-12
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	2e-12
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	2e-12
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	1e-11
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	2e-11
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	6e-11
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	9e-11
3rri_A	135	Glyoxalase/bleomycin resistance protein/dioxygena;	1e-10
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	1e-10
3m2o_A	164	Glyoxalase/bleomycin resistance protein; unknown f	2e-10
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	7e-10
3fcd_A	134	Lyase, ORF125EGC139; lactoylglutathione lyase, YEC	1e-09
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	4e-09
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	4e-09
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	7e-09
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	1e-08
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	3e-08
1xrk_A	124	Bleomycin resistance protein; arm exchange, ligand	1e-07
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	2e-07
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	2e-07
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	2e-06
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	4e-07
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	1e-06
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	6e-07
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	2e-04
1qto_A	122	Bleomycin-binding protein; arm-exchange, antibioti	7e-07
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	2e-06
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	3e-06
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	1e-05
3eck_A	365	Protein (homoprotocatechuate 2,3-dioxygenase); oxi	4e-06
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	5e-06
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	9e-05
1ecs_A	126	Bleomycin resistance protein; arm-exchange, antibi	5e-06
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	6e-06
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	1e-04
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	7e-06
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	1e-05
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	7e-06
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	1e-05
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	9e-06
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	4e-05
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	4e-05
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	5e-04
3bt3_A	148	Glyoxalase-related enzyme, ARAC type; VOC superfam	2e-04

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2 Length = 141

 Score =  113 bits (284), Expect = 1e-32
 Identities = 29/123 (23%), Positives = 54/123 (43%), Gaps = 10/123 (8%)

Query: 11  LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDN 70
           L+SLNH++L    ++ S+ F+  +LG     R  +    GA+L    + + L   E    
Sbjct: 2   LQSLNHLTLAVSDLQKSVTFWHELLGLTLHARWNT----GAYLTCGDLWVCLSYDEARQY 57

Query: 71  LPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSM 130
           +P   +  +      +   E+   + +RL++  +   K    EG       +F DPDG  
Sbjct: 58  VP--PQESDYTHYAFTVAEEDFEPLSQRLEQAGVTIWKQNKSEG----ASFYFLDPDGHK 111

Query: 131 IEI 133
           +E+
Sbjct: 112 LEL 114

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium} Length = 141

 Score =  110 bits (277), Expect = 2e-31
 Identities = 29/130 (22%), Positives = 58/130 (44%), Gaps = 14/130 (10%)

Query: 7   NPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSE 66
            P+ +K L  +++  +++E S  FY  +LGF       +  ++  W+     G+ +L+ E
Sbjct: 22  VPMNIKGLFEVAVKVKNLEKSSQFYTEILGFEAGLLDSARRWNFLWVSG-RAGMVVLQEE 80

Query: 67  EPDNLPKAGKNINPKDNHISFQCENMAI--VERRLKEMKIDYVKSRVEEGGINVDQLFFH 124
           +           N +  H SF+ E   I  +++ L+   +  V   V +  +    L+F 
Sbjct: 81  KE----------NWQQQHFSFRVEKSEIEPLKKALESKGVS-VHGPVNQEWMQAVSLYFA 129

Query: 125 DPDGSMIEIC 134
           DP+G  +E  
Sbjct: 130 DPNGHALEFT 139

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str} Length = 126

 Score =  109 bits (274), Expect = 2e-31
 Identities = 24/126 (19%), Positives = 45/126 (35%), Gaps = 15/126 (11%)

Query: 11  LKSLNHISLVC--RSVEASLDFYQNVLGFFPIRRPGS-FDFDGAWLFNYGMGIHLLKSEE 67
           ++ ++H+ +       E +  FY   +G   I +P       G W       IH+    E
Sbjct: 8   IQGIDHVQVAAPVGCEEEARAFYGETIGMEEIPKPEELKKRGGCWFKCGNQEIHI--GVE 65

Query: 68  PDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPD 127
            +  P        K  H +F    +   ++ L +  I+ +          V + +  DP 
Sbjct: 66  QNFNP-------AKRAHPAFYVLKIDEFKQELIKQGIEVIDDHARPD---VIRFYVSDPF 115

Query: 128 GSMIEI 133
           G+ IE 
Sbjct: 116 GNRIEF 121

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis} Length = 126

 Score =  107 bits (268), Expect = 3e-30
 Identities = 26/126 (20%), Positives = 51/126 (40%), Gaps = 5/126 (3%)

Query: 11  LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDG--AWLFNYGMGIHLLKSEEP 68
            K ++H+++   + +A+ +FY   LGF  +R     + +     L      + +      
Sbjct: 3   FKEIHHVAINASNYQATKNFYVEKLGFEVLRENHRPEKNDIKLDLKLGSQELEIF--ISD 60

Query: 69  DNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDG 128
               +          H++F+ E++  V   L E  I+    RV++        FF DPDG
Sbjct: 61  QFPARPSYPEALGLRHLAFKVEHIEEVIAFLNEQGIETEPLRVDDFTG-KKMTFFFDPDG 119

Query: 129 SMIEIC 134
             +E+ 
Sbjct: 120 LPLELH 125

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102} Length = 156

 Score =  102 bits (255), Expect = 4e-28
 Identities = 34/148 (22%), Positives = 56/148 (37%), Gaps = 14/148 (9%)

Query: 1   MKESVENPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRR---PGSFDFD------GA 51
              SV  P  L+ ++HI+L  + ++AS  FY  +LG   +     P +            
Sbjct: 7   SVNSVLAPGNLRKVHHIALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASGKVAN 66

Query: 52  WLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQCENMAI--VERRLKEMKIDYVKS 109
           ++   G  + L    E        +    +  H++F  +          + E KI     
Sbjct: 67  FITPDGTILDLFGEPELSPPDPNPEKTFTRAYHLAFDIDPQLFDRAVTVIGENKIAIAHG 126

Query: 110 RVEEGGINVDQLFFHDPDGSMIEICNCD 137
            V         ++F+DPDG MIEI  CD
Sbjct: 127 PVTRPTG--RGVYFYDPDGFMIEIR-CD 151

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A Length = 133

 Score = 99.9 bits (249), Expect = 2e-27
 Identities = 27/125 (21%), Positives = 52/125 (41%), Gaps = 9/125 (7%)

Query: 11  LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDN 70
           +  L+HI+L+ + +  +  F QN+     I   G   F  +    + +    +   E D+
Sbjct: 2   ISGLSHITLIVKDLNKTTAFLQNIFNAEEIYSSGDKTFSLSKEKFFLIAGLWICIMEGDS 61

Query: 71  LPKAGKNINPKDNHISFQC--ENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDG 128
           L +         NHI+FQ   E +     R+K + ++    R    G     ++F+D D 
Sbjct: 62  LQE------RTYNHIAFQIQSEEVDEYTERIKALGVEMKPERPRVQG-EGRSIYFYDFDN 114

Query: 129 SMIEI 133
            + E+
Sbjct: 115 HLFEL 119

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A Length = 135

 Score = 99.5 bits (248), Expect = 2e-27
 Identities = 31/125 (24%), Positives = 50/125 (40%), Gaps = 17/125 (13%)

Query: 11  LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDN 70
           L  LNH++L    + AS+ FY+++LGF    R       GA+L    + + L +  +   
Sbjct: 2   LTGLNHLTLAVADLPASIAFYRDLLGFRLEARWD----QGAYLELGSLWLCLSREPQYG- 56

Query: 71  LPKAGKNINPKDNHISFQC--ENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDG 128
                        H +F     + A    +L+   +   K    EG    D  +F DPDG
Sbjct: 57  ------GPAADYTHYAFGIAAADFARFAAQLRAHGVREWKQNRSEG----DSFYFLDPDG 106

Query: 129 SMIEI 133
             +E 
Sbjct: 107 HRLEA 111

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygenase, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A Length = 152

 Score =  100 bits (249), Expect = 3e-27
 Identities = 30/136 (22%), Positives = 54/136 (39%), Gaps = 7/136 (5%)

Query: 2   KESVENPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIH 61
           K      + +  ++H+ L    +  ++ FY+ VLGF  +     F  +   L      I+
Sbjct: 12  KHHESIQMIIDRIDHLVLTVSDISTTIRFYEEVLGFSAVT----FKQNRKALIFGAQKIN 67

Query: 62  LLKSEEPDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGI--NVD 119
           L + E     PKA +      +        +  V   + +  I  V+  VE  G    + 
Sbjct: 68  LHQQEME-FEPKASRPTPGSADLCFITSTPINDVVSEILQAGISIVEGPVERTGATGEIM 126

Query: 120 QLFFHDPDGSMIEICN 135
            ++  DPDG++IEI  
Sbjct: 127 SIYIRDPDGNLIEISQ 142

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2 Length = 139

 Score = 97.3 bits (242), Expect = 2e-26
 Identities = 22/132 (16%), Positives = 51/132 (38%), Gaps = 10/132 (7%)

Query: 11  LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDN 70
           ++ L+H++ + R +E      + V     +    +  F  +    + +G   +   + + 
Sbjct: 2   IEGLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGDIWVAIMQGEK 61

Query: 71  LPKAGKNINPKDNHISFQC--ENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDG 128
           L +         NHI+F+    +      R+ ++ +D    R    G     ++F+D D 
Sbjct: 62  LAERS------YNHIAFKIDDADFDRYAERVGKLGLDMRPPRPRVEG-EGRSIYFYDDDN 114

Query: 129 SMIEICNCDVLP 140
            M E+ +   L 
Sbjct: 115 HMFEL-HTGTLT 125

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans} Length = 141

 Score = 95.4 bits (237), Expect = 1e-25
 Identities = 25/128 (19%), Positives = 49/128 (38%), Gaps = 5/128 (3%)

Query: 11  LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDN 70
           +  L+++++  R + A   FYQ V GF  I    S  F G       +G +  ++ E   
Sbjct: 6   MADLSYVNIFTRDIVAMSAFYQQVFGFQEIESIRSPIFRGLDTGKSCIGFNAHEAYELMQ 65

Query: 71  LPKAGKNINPKDNHISFQCENMAIVER---RLKEMKIDYVKSRVEEGGINVDQLFFHDPD 127
           L +     +     ++F  +    V++            +K+  E    +  Q    DP+
Sbjct: 66  LAQ-FSETSGIKFLLNFDVDTKEAVDKLVPVAIAAGATLIKAPYETYY-HWYQAVLLDPE 123

Query: 128 GSMIEICN 135
            ++  I N
Sbjct: 124 RNVFRINN 131

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP} Length = 136

 Score = 91.7 bits (228), Expect = 3e-24
 Identities = 28/128 (21%), Positives = 48/128 (37%), Gaps = 9/128 (7%)

Query: 11  LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLF-NYGMGIHLLKSEEPD 69
           L  ++H+SL  R ++ S  +Y  +L +  + R        A      G+ I L   E   
Sbjct: 3   LSGVSHVSLTVRDLDISCRWYTEILDWKELVRGRGDTTSFAHGVLPGGLSIVLR--EHDG 60

Query: 70  NLPKAGKNINPKDNHISFQCENMAIVE---RRLKEMKIDYVKSRVEEGGINVDQLFFHDP 126
                     P  +H+SF  E+M  ++    RL +    +  ++    G     L F D 
Sbjct: 61  GGTDLFDETRPGLDHLSFSVESMTDLDVLEERLAKAGAAFTPTQELPFG---WILAFRDA 117

Query: 127 DGSMIEIC 134
           D   +E  
Sbjct: 118 DNIALEAM 125

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A* Length = 133

 Score = 86.9 bits (215), Expect = 2e-22
 Identities = 26/130 (20%), Positives = 55/130 (42%), Gaps = 9/130 (6%)

Query: 11  LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDN 70
           +  L+H+ L    +  + +FY+ VLG   +     F      L      I+L +      
Sbjct: 8   ISHLDHLVLTVADIPTTTNFYEKVLGMKAVS----FGAGRIALEFGHQKINLHQLGNEFE 63

Query: 71  LPKAGKNINPKDNHISFQCE-NMAIVERRLKEMKIDYVKSRVEEGGIN--VDQLFFHDPD 127
            PKA +N+      + F  +  ++   + +++  +  ++  V+  G    +   +F DPD
Sbjct: 64  -PKA-QNVRVGSADLCFITDTVLSDAMKHVEDQGVTIMEGPVKRTGAQGAITSFYFRDPD 121

Query: 128 GSMIEICNCD 137
           G++IE+    
Sbjct: 122 GNLIEVSTYS 131

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans} Length = 134

 Score = 85.2 bits (211), Expect = 8e-22
 Identities = 29/132 (21%), Positives = 54/132 (40%), Gaps = 9/132 (6%)

Query: 11  LKSLNHISLVCRSVEASLDFYQNVLGFFPIRR--PGSFDFDGAWLFNYGMGIHLLKSEEP 68
           LK+++H++L+    + S +FY N LGF  IR             L    + + +  ++  
Sbjct: 3   LKAVHHVALIVSDYDKSYEFYVNQLGFEVIRENHRPKRHDYKLDLKCGDIELEIFGNKLT 62

Query: 69  DNLPKAGKNINPKDN------HISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLF 122
           D+   A               H++F  E++    + L  + I   + R ++        F
Sbjct: 63  DSNYCAPPERISWPREACGLRHLAFYVEDVEASRQELIALGIRVEEVRYDDYTGKK-MAF 121

Query: 123 FHDPDGSMIEIC 134
           F DPDG  +E+ 
Sbjct: 122 FFDPDGLPLELH 133

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125} Length = 146

 Score = 85.3 bits (211), Expect = 1e-21
 Identities = 27/133 (20%), Positives = 47/133 (35%), Gaps = 7/133 (5%)

Query: 6   ENPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKS 65
           EN      L+H+ +    +E S+ F+  +LG        S+    ++    G    +   
Sbjct: 13  ENLYFQGMLHHVEINVDHLEESIAFWDWLLGELGYEDYQSWSRGKSYKH--GKTYLVFVQ 70

Query: 66  EEPDNLPKAGKNINPKDNHISFQCENMAIVER---RLKEMKIDYVKSRVE--EGGINVDQ 120
            E               NH++F   +   V+    +LKE     +        GG N   
Sbjct: 71  TEDRFQTPTFHRKRTGLNHLAFHAASREKVDELTQKLKERGDPILYEDRHPFAGGPNHYA 130

Query: 121 LFFHDPDGSMIEI 133
           +F  DP+   +EI
Sbjct: 131 VFCEDPNRIKVEI 143

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens} Length = 147

 Score = 84.7 bits (209), Expect = 2e-21
 Identities = 29/138 (21%), Positives = 56/138 (40%), Gaps = 9/138 (6%)

Query: 1   MKESVENPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGI 60
            +      + ++ L+HI +  +S++ +  FY  +LG   +     F  D   L       
Sbjct: 15  TENLYFQSMLIRRLDHIVMTVKSIKDTTMFYSKILGMEVMT----FKEDRKALCFGDQKF 70

Query: 61  HLLKSEEPDNLPKAGKNINPKDNHISFQCE-NMAIVERRLKEMKIDYVKSRVEEGGI--N 117
           +L +  +    PKA  +  P    I    E  +  + + LK   +   +  V   G    
Sbjct: 71  NLHEVGKEFE-PKA-AHPVPGSLDICLITEVPLEEMIQHLKACDVPIEEGPVPRTGAKGP 128

Query: 118 VDQLFFHDPDGSMIEICN 135
           +  ++F DPD ++IE+ N
Sbjct: 129 IMSIYFRDPDRNLIEVSN 146

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens} Length = 160

 Score = 79.8 bits (197), Expect = 2e-19
 Identities = 23/132 (17%), Positives = 47/132 (35%), Gaps = 13/132 (9%)

Query: 11  LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDN 70
             ++   +L    ++A+  FY++V G   + +           F  G  + LL   +  +
Sbjct: 6   PSAIMETALYADDLDAAEAFYRDVFGLEMVLKLP----GQLVFFKCGRQMLLLFDPQESS 61

Query: 71  LPKAGKNINPKD----NHISFQCENMAIVE---RRLKEMKIDYVKSRVEEGGINVDQLFF 123
              A   I         H  F  ++ A V+    R + ++I          G     ++ 
Sbjct: 62  RADANNPIPRHGAVGQGHFCFYADDKAEVDEWKTRFEALEIPVEHYHRWPNGS--YSVYI 119

Query: 124 HDPDGSMIEICN 135
            DP G+ +E+  
Sbjct: 120 RDPAGNSVEVGE 131

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2 Length = 113

 Score = 75.1 bits (185), Expect = 4e-18
 Identities = 27/126 (21%), Positives = 44/126 (34%), Gaps = 24/126 (19%)

Query: 14  LNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLF---NYGMGIHLLKSEEPDN 70
           + H++L    V A+ +F +   G       G      A+     N G  + L+K +E   
Sbjct: 4   IKHLNLTVADVVAAREFLEKYFGLTCSGTRG-----NAFAVMRDNDGFILTLMKGKEVQ- 57

Query: 71  LPKAGKNINPKDNHISFQCENMAIVER---RLKEMKIDYVKSRVEEGGINVDQLFFHDPD 127
                    PK  H+ F  E+   V++   RLKE        +           +   P 
Sbjct: 58  --------YPKTFHVGFPQESEEQVDKINQRLKEDGFLVEPPKHAHA----YTFYVEAPG 105

Query: 128 GSMIEI 133
           G  IE+
Sbjct: 106 GFTIEV 111

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str} Length = 141

 Score = 74.2 bits (182), Expect = 2e-17
 Identities = 24/124 (19%), Positives = 45/124 (36%), Gaps = 10/124 (8%)

Query: 14  LNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPD---N 70
             +     R +  S  FY++ LG   +      DF    LF  G  IH  +S E      
Sbjct: 9   FVNPIPFVRDINRSKSFYRDRLGLKIL-----EDFGSFVLFETGFAIHEGRSLEETIWRT 63

Query: 71  LPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSM 130
              A +    ++  + F+  ++    + +    ++ +     +         F+DPDG  
Sbjct: 64  SSDAQEAYGRRNMLLYFEHADVDAAFQDIAP-HVELIHPLERQAW-GQRVFRFYDPDGHA 121

Query: 131 IEIC 134
           IE+ 
Sbjct: 122 IEVG 125

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* Length = 184

 Score = 74.3 bits (182), Expect = 5e-17
 Identities = 32/154 (20%), Positives = 57/154 (37%), Gaps = 27/154 (17%)

Query: 14  LNHISLVCRSVEASLDFYQNVLGFFPIRR---------------------PGSFDFDGAW 52
           L    L  +  + SLDFY  VLG   +++                     P       AW
Sbjct: 32  LQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAW 91

Query: 53  LFNYGMGIHLLKSEEPDNLPKAGKNINPKD----NHISFQCENMAIVERRLKEMKIDYVK 108
            F+    + L  +   ++      +    D     HI     ++    +R +E+ + +VK
Sbjct: 92  TFSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVK 151

Query: 109 SRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVV 142
            + ++G +     F  DPDG  IEI N + +  +
Sbjct: 152 -KPDDGKMK-GLAFIQDPDGYWIEILNPNKIATI 183

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp} Length = 335

 Score = 70.1 bits (171), Expect = 9e-15
 Identities = 28/139 (20%), Positives = 56/139 (40%), Gaps = 11/139 (7%)

Query: 11  LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMG----IHLLKSE 66
              ++HI+ +    + + DFY  VLG   +++  +FD  G +   +G        ++   
Sbjct: 6   TMGIHHITAIVGHPQENTDFYAGVLGLRLVKQTVNFDDPGTYHLYFGNEGGKPGTIITFF 65

Query: 67  EPDNLPKAGKNINPKDNHISFQ--CENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFH 124
                 + G   + +    S+      MA  E+RL++  + Y  +++E  G     + F 
Sbjct: 66  PWAGARQ-GVIGDGQVGVTSYVVPKGAMAFWEKRLEKFNVPY--TKIERFGEQY--VEFD 120

Query: 125 DPDGSMIEICNCDVLPVVP 143
           DP G  +EI   +      
Sbjct: 121 DPHGLHLEIVEREEGEANT 139

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp} Length = 335

 Score = 53.6 bits (128), Expect = 6e-09
 Identities = 19/135 (14%), Positives = 42/135 (31%), Gaps = 30/135 (22%)

Query: 12  KSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGS---FDFDGAWLFNYGMGIHLLKSEEP 68
           K     +L+    + + D  +N++G   + + G    +   G    + G  I L  +   
Sbjct: 152 KGFGGATLLSEQPDKTADLLENIMGLERVGKEGDFVRYRSAG----DIGNVIDLKLTPIG 207

Query: 69  DNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQ-------- 120
                AG       +HI+++  +                +  +   G  V          
Sbjct: 208 RGQMGAG-----TVHHIAWRANDDEDQLD---------WQRYIASHGYGVTPVRDRNYFN 253

Query: 121 -LFFHDPDGSMIEIC 134
            ++F +    + EI 
Sbjct: 254 AIYFREHGEILFEIA 268

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} Length = 134

 Score = 65.9 bits (161), Expect = 2e-14
 Identities = 31/131 (23%), Positives = 53/131 (40%), Gaps = 8/131 (6%)

Query: 11  LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMG---IHLLKSEE 67
           L  LNH+++    +E +  FY+N+LG   +         G  +    +G   + LL    
Sbjct: 3   LGRLNHVAIAVPDLEKAAAFYKNILG-AQVSEAVPLPEHGVSVVFVNLGNTKMELLHPLG 61

Query: 68  PD--NLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFH- 124
            D        KN     +HI  + +N+      LK+ KI  +   V+ G      +F H 
Sbjct: 62  LDSPIAGFLQKNKAGGMHHICIEVDNINAAVMDLKKKKIRSLSEEVKIGAHGKPVIFLHP 121

Query: 125 -DPDGSMIEIC 134
            D  G ++E+ 
Sbjct: 122 KDCGGVLVELE 132

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A Length = 133

 Score = 65.5 bits (160), Expect = 3e-14
 Identities = 17/128 (13%), Positives = 46/128 (35%), Gaps = 5/128 (3%)

Query: 11  LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMG---IHLLKSEE 67
              ++HI    ++++++L  ++  LG+         +    ++     G   + L+  + 
Sbjct: 5   SLKVHHIGYAVKNIDSALKKFKR-LGYVEESEVVRDEVRKVYIQFVINGGYRVELVAPDG 63

Query: 68  PDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQ-LFFHDP 126
            D+             HI ++ E++      + ++     K       I+  +  F    
Sbjct: 64  EDSPINKTIKKGSTPYHICYEVEDIQKSIEEMSQIGYTLFKKAEIAPAIDNRKVAFLFST 123

Query: 127 DGSMIEIC 134
           D  +IE+ 
Sbjct: 124 DIGLIELL 131

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str} Length = 127

 Score = 63.8 bits (155), Expect = 1e-13
 Identities = 22/126 (17%), Positives = 43/126 (34%), Gaps = 10/126 (7%)

Query: 14  LNHISLVCRSVEASLDFYQNVLGFFPIRRPGS--FDFDGAWL-FNYGMGIHLLKSEEPDN 70
           + H++L   ++E    FY    G        +    F+  +L F  G  + ++   +   
Sbjct: 4   IEHVALWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSFEDGARLEIMSRTDVTG 63

Query: 71  LPKAGKNINPKDNHISFQCENMAIVER---RLKEMKIDYVKSRVEEGGINVDQLFFHDPD 127
                   N    HI+        V+    +L++     +       G    +    DP+
Sbjct: 64  KTTGE---NLGWAHIAISTGTKEAVDELTEKLRQDGFA-IAGEPRMTGDGYYESVVLDPE 119

Query: 128 GSMIEI 133
           G+ IEI
Sbjct: 120 GNRIEI 125

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10 Length = 338

 Score = 67.0 bits (163), Expect = 1e-13
 Identities = 22/134 (16%), Positives = 48/134 (35%), Gaps = 11/134 (8%)

Query: 11  LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIH----LLKSE 66
           +K  +HIS+V ++   +  FY+NVLG   ++   + D    +   YG         L   
Sbjct: 28  IKGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFF 87

Query: 67  EPDNLPKAGKNINPKDNHISFQ---CENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFF 123
           E   + +           I       +++   + R ++  + + +            L F
Sbjct: 88  EIPLVGR-TYRGTNAITRIGLLVPSEDSLHYWKERFEKFDVKHSE-MTTYANRPA--LQF 143

Query: 124 HDPDGSMIEICNCD 137
            D +G  + +   +
Sbjct: 144 EDAEGLRLVLLVSN 157

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10 Length = 338

 Score = 53.5 bits (128), Expect = 6e-09
 Identities = 19/130 (14%), Positives = 46/130 (35%), Gaps = 23/130 (17%)

Query: 14  LNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNLPK 73
           +  + L  R ++        + G+  + R        +        I +   + P   P 
Sbjct: 181 MGSVELTVRRLDKMASTLTEIFGYTEVSRNDQEAIFQSIKGEAFGEIVVKYLDGPTEKPG 240

Query: 74  AGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINV----DQLFFH----- 124
            G       +H++ + +N A         ++ Y + +V++ G +     D+ +F      
Sbjct: 241 RG-----SIHHLAIRVKNDA---------ELAYWEEQVKQRGFHSSGIIDRFYFKSLYFR 286

Query: 125 DPDGSMIEIC 134
           + +G + EI 
Sbjct: 287 ESNGILFEIA 296

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus} Length = 145

 Score = 63.9 bits (155), Expect = 2e-13
 Identities = 21/128 (16%), Positives = 40/128 (31%), Gaps = 17/128 (13%)

Query: 19  LVCRSVEASLDFYQNVLGF-FPIRRPG----SFDFDGAWLFNYGMGIHLLKSEEPDNLPK 73
           L C  +  S  F+ +VLGF     RP         DG  +      +  +  +    L  
Sbjct: 11  LYCFDINVSQSFFVDVLGFEVKYERPDEEFVYLTLDGVDVM-----LEGIAGKSRKWLSG 65

Query: 74  AGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKS-------RVEEGGINVDQLFFHDP 126
             +       +  +   ++  + +R+ E   D +         +  +      Q     P
Sbjct: 66  DLEFPLGSGVNFQWDVIDIEPLYQRVNESAADSIYLALESKSYQCGDSIATQKQFMVQTP 125

Query: 127 DGSMIEIC 134
           DG +   C
Sbjct: 126 DGYLFRFC 133

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens} Length = 144

 Score = 63.5 bits (154), Expect = 2e-13
 Identities = 26/126 (20%), Positives = 45/126 (35%), Gaps = 14/126 (11%)

Query: 13  SLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNLP 72
             +   L   +  AS  FY+ +LG  P+    +F      LF    G+ L         P
Sbjct: 25  HPDFTILYVDNPPASTQFYKALLGVDPVESSPTF-----SLFVLANGMKLGLWSRHTVEP 79

Query: 73  KAGKNINPKDNHISFQCENMAIVER---RLKEMKIDYVKSRVEEG-GINVDQLFFHDPDG 128
           KA  ++      ++F+ EN A V+      K   +  ++   +   G         DPD 
Sbjct: 80  KA--SVTGGGGELAFRVENDAQVDETFAGWKASGVAMLQQPAKMEFGYT---FTAADPDS 134

Query: 129 SMIEIC 134
             + + 
Sbjct: 135 HRLRVY 140

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2 Length = 118

 Score = 62.1 bits (151), Expect = 4e-13
 Identities = 20/120 (16%), Positives = 39/120 (32%), Gaps = 11/120 (9%)

Query: 14  LNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNLPK 73
           LN + ++  +V       +++L          +  DG   F  G    +L       L  
Sbjct: 6   LNQLDIIVSNVPQVCADLEHILDK-----KADYANDGFAQFTIGSHCLMLSQNHLVPLEN 60

Query: 74  AGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEI 133
               I      I  + E++    +RL E+ I  +           + L    P G +++ 
Sbjct: 61  FQSGI-----IIHIEVEDVDQNYKRLNELGIKVLHGPTVTDW-GTESLLVQGPAGLVLDF 114

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi} Length = 150

 Score = 61.2 bits (148), Expect = 2e-12
 Identities = 22/127 (17%), Positives = 39/127 (30%), Gaps = 8/127 (6%)

Query: 11  LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDN 70
           L+ +  I+L    +EAS  FY    G+ P+ R         +    G  +     +    
Sbjct: 3   LQQVAVITLGIGDLEASARFYGEGFGWAPVFRNPEI----IFYQMNGFVLATWLVQNLQE 58

Query: 71  LPKAGKNINPKDNHISFQCENMAIVER---RLKEMKIDYVKSRVEEGGINVDQLFFHDPD 127
                    P    ++        V     RL       ++         + + +  DPD
Sbjct: 59  DVGVAVTSRPGSMALAHNVRAETEVAPLMERLVAAGGQLLRPADAPPHGGL-RGYVADPD 117

Query: 128 GSMIEIC 134
           G + EI 
Sbjct: 118 GHIWEIA 124

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A* Length = 132

 Score = 60.8 bits (147), Expect = 2e-12
 Identities = 21/130 (16%), Positives = 38/130 (29%), Gaps = 15/130 (11%)

Query: 13  SLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNLP 72
           + N   +   +VE S DFY+ +    P+     +       F              +   
Sbjct: 13  TPNLQLVYVSNVERSTDFYRFIFKKEPVFVTPRYV-----AFPSSGDALFAIWSGGEEPV 67

Query: 73  KAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLF-----FHDPD 127
                  P+ + I         V++   E        ++         +F       DPD
Sbjct: 68  AEI----PRFSEIGIMLPTGEDVDKLFNEWT-KQKSHQIIVIKEPYTDVFGRTFLISDPD 122

Query: 128 GSMIEICNCD 137
           G +I +C  D
Sbjct: 123 GHIIRVCPLD 132

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6 Length = 153

 Score = 61.0 bits (148), Expect = 2e-12
 Identities = 20/145 (13%), Positives = 49/145 (33%), Gaps = 27/145 (18%)

Query: 11  LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAW------------------ 52
           L  ++++S+V  S++ ++ F++  +G     R    + +G W                  
Sbjct: 9   LLRMDNVSIVVESLDNAISFFEE-IGLNLEGR---ANVEGEWAGRVTGLGSQCVEIAMMV 64

Query: 53  LFNYGMGIHLLKSEEPDNLPKAGKNINPKD---NHISFQCENMAIVERRLKEMKIDYVKS 109
             +    I L +   P       +           + F  E++  +  RL +   + V  
Sbjct: 65  TPDGHSRIELSRFLTPPT-IADHRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGE 123

Query: 110 RVEEGGINVDQLFFHDPDGSMIEIC 134
            V+    +    +    +G +I + 
Sbjct: 124 VVQYEN-SYRLCYIRGVEGILIGLA 147

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A* Length = 252

 Score = 62.8 bits (152), Expect = 2e-12
 Identities = 26/151 (17%), Positives = 49/151 (32%), Gaps = 20/151 (13%)

Query: 11  LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDN 70
           + S+  ++L    ++  L FY N+LG   +             F   +G+  ++     +
Sbjct: 24  MTSIKQLTLYTAELDRMLAFYTNMLGAQHVHEQADA-------FTIQLGVSQIQFRAAAD 76

Query: 71  LPKAGKNINPKDNHISFQCENMAIVE--RRLKEMKIDYVKS---RVEEGGINVDQLFFHD 125
             K          HI+         E    L        ++   +      N    +  D
Sbjct: 77  GTKPF-------YHIAINIAANHFQEGKAWLSGFGELLTENDEDQAYFPFFNAYSCYVED 129

Query: 126 PDGSMIE-ICNCDVLPVVPLAGDAVRIRSCT 155
           P G++IE I      PV+     A ++ S  
Sbjct: 130 PSGNIIELISRQQAAPVLDKPFSADQLLSIG 160

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8 Length = 139

 Score = 58.8 bits (142), Expect = 1e-11
 Identities = 25/122 (20%), Positives = 38/122 (31%), Gaps = 15/122 (12%)

Query: 22  RSVEASLDFYQNVLGFFPIRR-PGSFDFDGAWLFNYGMGIHLLKSEEPDNLPKAGKNINP 80
             ++  + FY+  L    I        +DG          HL   E       +   +  
Sbjct: 20  GQLDEIIRFYEEGLCLKRIGEFSQHNGYDGVMFGLPHADYHL---EFTQYEGGSTAPVPH 76

Query: 81  KDNHISFQCENMAIVE---RRLKEMKIDYVKSRV---EEGGINVDQLFFHDPDGSMIEIC 134
            D+ + F   N   +     +LK M    V+S       GG+        DPDG  I   
Sbjct: 77  PDSLLVFYVPNAVELAAITSKLKHMGYQEVESENPYWSNGGV-----TIEDPDGWRIVFM 131

Query: 135 NC 136
           N 
Sbjct: 132 NS 133

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila} Length = 148

 Score = 58.6 bits (141), Expect = 2e-11
 Identities = 26/127 (20%), Positives = 49/127 (38%), Gaps = 14/127 (11%)

Query: 11  LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDN 70
           L   N +    ++   S +FY+N+L   PI    +F      +F    G+ L    + + 
Sbjct: 4   LSDPNLVLFYVKNPAKSEEFYKNLLDTQPIESSPTF-----AMFVMKTGLRLGLWAQEEI 58

Query: 71  LPKAGKNINPKDNHISFQCENMAIVER---RLKEMKIDYVKSRVEEG-GINVDQLFFHDP 126
            PKA +        +SFQ  +  +V+    +  + +I  ++   +   G         DP
Sbjct: 59  EPKAHQ--TGGGMELSFQVNSNEMVDEIHRQWSDKEISIIQPPTQMDFGYT---FVGVDP 113

Query: 127 DGSMIEI 133
           D   + I
Sbjct: 114 DEHRLRI 120

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A* Length = 138

 Score = 56.8 bits (137), Expect = 6e-11
 Identities = 24/128 (18%), Positives = 45/128 (35%), Gaps = 13/128 (10%)

Query: 14  LNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNLPK 73
           ++  ++V   +  SL+FY+  LG      P   D           GI L           
Sbjct: 5   ISLFAVVVEDMAKSLEFYR-KLGV---EIPAEADSAPHTEAVLDGGIRLAWDTVETVRSY 60

Query: 74  AGKNINPKDNH---ISFQCENMAIVERRLKEMKIDYVKS----RVEEGGINVDQLFFHDP 126
             +   P   H   I+F+  + A V+++  E+     +          G         DP
Sbjct: 61  DPEWQAPTGGHRFAIAFEFPDTASVDKKYAELVDAGYEGHLKPWNAVWGQRY--AIVKDP 118

Query: 127 DGSMIEIC 134
           DG+++++ 
Sbjct: 119 DGNVVDLF 126

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans} Length = 161

 Score = 56.8 bits (137), Expect = 9e-11
 Identities = 23/130 (17%), Positives = 44/130 (33%), Gaps = 7/130 (5%)

Query: 11  LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMG---IHLLKSEE 67
              L+HI +   S++  L FY   L    +         G  +    +G   I LL+   
Sbjct: 6   SNKLDHIGIAVTSIKDVLPFYVGSLK-LKLLGMEDLPSQGVKIAFLEIGESKIELLEPLS 64

Query: 68  PDNLPKAGKNINPKD-NHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFH-- 124
            ++          +  +HI+   +++    + +KE  +  +      G       F H  
Sbjct: 65  EESPIAKFIQKRGEGIHHIAIGVKSIEERIQEVKENGVQMINDEPVPGARGAQVAFLHPR 124

Query: 125 DPDGSMIEIC 134
              G + E C
Sbjct: 125 SARGVLYEFC 134

>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp} Length = 135

 Score = 56.3 bits (135), Expect = 1e-10
 Identities = 22/124 (17%), Positives = 42/124 (33%), Gaps = 10/124 (8%)

Query: 13  SLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNLP 72
            + H+++  R ++ + DFY   LG    RR      D   L  +G  +    S+  D   
Sbjct: 9   DVFHLAIPARDLDEAYDFYVTKLGCKLARRYP----DRITLDFFGDQLVCHLSDRWDREV 64

Query: 73  KAGKNINPKDNHISFQCENMAIVERRLKEMKIDYV---KSRVEEGGINVDQLFFHDPDGS 129
                            ++   + +  K+  I +      R E      +  F  DP  +
Sbjct: 65  ---SMYPRHFGITFRDKKHFDNLYKLAKQRGIPFYHDLSRRFEGLIEEHETFFLIDPSNN 121

Query: 130 MIEI 133
           ++E 
Sbjct: 122 LLEF 125

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei} Length = 144

 Score = 56.4 bits (136), Expect = 1e-10
 Identities = 20/120 (16%), Positives = 43/120 (35%), Gaps = 13/120 (10%)

Query: 16  HISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNLPKAG 75
              L    +  +L+FY+ +L      R   F+     +    +   LL +   + L    
Sbjct: 9   LSRLYVADLNPALEFYEELLETPVAMR---FEIPQTGVELAQISTILLIAGSEEALKPFR 65

Query: 76  KNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEE-GGINVDQLFFHDPDGSMIEIC 134
                 +   +F  +++   +  L+E   + ++   +   G N+        DGS+IE  
Sbjct: 66  ------NTQATFLVDSLDKFKTFLEENGAEIIRGPSKVPTGRNM---TVRHSDGSVIEYV 116

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2 Length = 119

 Score = 53.6 bits (129), Expect = 7e-10
 Identities = 22/116 (18%), Positives = 37/116 (31%), Gaps = 12/116 (10%)

Query: 19  LVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNLPKAGKNI 78
           +       +  FY ++LG  P+      D          +  H   S   +         
Sbjct: 13  IATPEPARAQAFYGDILG-MPVA----MDHGWIVTHASPLEAHAQVSFAREGGSG----- 62

Query: 79  NPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEIC 134
                 +S + +N   V  R+ +  +      V E    V +LF  DP G +I I 
Sbjct: 63  -TDVPDLSIEVDNFDEVHARILKAGLPIEYGPVTEAW-GVQRLFLRDPFGKLINIL 116

>3fcd_A Lyase, ORF125EGC139; lactoylglutathione lyase, YECM, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.92A {Uncultured bacterium} Length = 134

 Score = 52.9 bits (127), Expect = 1e-09
 Identities = 21/122 (17%), Positives = 41/122 (33%), Gaps = 18/122 (14%)

Query: 19  LVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNLPKAGKNI 78
           L    ++ +L  + + LGF    R  ++    A+L   G G+ LL+      +P     +
Sbjct: 13  LHIPDMQEALTLFCDTLGFELKYRHSNY----AYLELSGCGLRLLEEPARKIIPDGIARV 68

Query: 79  NPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEE------GGINVDQLFFHDPDGSMIE 132
                 I     ++  +  +L     +    +VE       G     +     PDG  + 
Sbjct: 69  A-----ICIDVSDIDSLHTKLSPALENLPADQVEPLKNMPYG---QREFQVRMPDGDWLN 120

Query: 133 IC 134
             
Sbjct: 121 FT 122

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila} Length = 155

 Score = 52.4 bits (125), Expect = 4e-09
 Identities = 21/124 (16%), Positives = 40/124 (32%), Gaps = 6/124 (4%)

Query: 14  LNHISLVCRSVEASLDFYQNVLGFFPIRR--PGSFDFDGAWLFNYGMGIHLLKSEEPDNL 71
           ++  ++       +  FY   LGF        G+  +          G  LL        
Sbjct: 27  IHLTNVFVDDQAKAESFYTGKLGFLVKADVPVGADRWLTVVSPEAPDGTQLLLEPSSHAA 86

Query: 72  PKAGKNINPKDN--HISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGS 129
               K     D     SF  +++A    RL  + + + +   + G   V      D  G+
Sbjct: 87  VTPFKEALVADGIPAASFAVDDIAAEYERLSALGVRFTQEPTDMGP--VVTAILDDTCGN 144

Query: 130 MIEI 133
           +I++
Sbjct: 145 LIQL 148

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A Length = 148

 Score = 52.0 bits (124), Expect = 4e-09
 Identities = 21/137 (15%), Positives = 48/137 (35%), Gaps = 13/137 (9%)

Query: 11  LKSLNHISLVCRSVEASLDFYQNVLGFFPIRR--------PGSFDFDGAWLFNYGMGIHL 62
              ++H++  C   + +  +YQ   G+  + R                A L  +   + +
Sbjct: 7   FICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQV 66

Query: 63  LKS---EEPDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVD 119
           +     E       A  N     +H++++ +++  V   L+E  +  +    + G     
Sbjct: 67  MAPLNDESTVAKWLAKHNGRAGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGGNR 126

Query: 120 QLFFH--DPDGSMIEIC 134
             F H     G +IE+ 
Sbjct: 127 INFMHPKSGKGVLIELT 143

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis} Length = 159

 Score = 51.8 bits (124), Expect = 7e-09
 Identities = 28/148 (18%), Positives = 53/148 (35%), Gaps = 22/148 (14%)

Query: 6   ENPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAW------------- 52
           +N L +++   I +V R +E SL  Y    G    +   + D+  A              
Sbjct: 12  KNILDMRNTVQIGIVVRDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAK 71

Query: 53  --LFNYGMG-IHLLKSEEPDNLPKAGKNIN-PKDNHISFQCENMAIVERRLKEMKIDYVK 108
              F  G   + L++ +E  +  +   + N    +HI+F  ++M      L    +  ++
Sbjct: 72  LAFFELGPLQLELIEPDENPSTWREFLDKNGEGIHHIAFVVKDMDRKVEELYRKGMKVIQ 131

Query: 109 SRVEEGGINVDQLFFH--DPDGSMIEIC 134
               EGG      +         MIE+ 
Sbjct: 132 KGDFEGG---RYAYIDTLRALKVMIELL 156

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A Length = 135

 Score = 50.1 bits (120), Expect = 1e-08
 Identities = 28/136 (20%), Positives = 45/136 (33%), Gaps = 31/136 (22%)

Query: 14  LNHISLVCRSVEASLDFYQNVLGFFPIRR--------------PGSFDFDGA--WLFNYG 57
           L H  L    ++ S+DFY  VLG   +R                G    +      +N+G
Sbjct: 3   LLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWG 62

Query: 58  MGIHLLKSEEPDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGIN 117
           +     K E                 HI+   +N A    ++++   +  +      G  
Sbjct: 63  VD----KYELGTAY-----------GHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGT 107

Query: 118 VDQLFFHDPDGSMIEI 133
               F  DPDG  IE+
Sbjct: 108 TVIAFVEDPDGYKIEL 123

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100} Length = 128

 Score = 49.2 bits (117), Expect = 3e-08
 Identities = 23/124 (18%), Positives = 43/124 (34%), Gaps = 15/124 (12%)

Query: 14  LNHISLVCRSVEASLDFYQNVLGF-FPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNLP 72
           +  I++    ++  L FY+ ++GF F   +          + N G+   L   + P    
Sbjct: 7   ITSITINTSHLQGMLGFYR-IIGFQFTASKVDKGSEVHRAVHN-GVEFSLYSIQNPQRSQ 64

Query: 73  KAGKNINPKDNHISFQCENM-AIVERRLKEMKIDYVKS-RVEEGGINVDQLFFHDPDGSM 130
                       + FQ  ++   V+  +K      +        G    +    DPDG  
Sbjct: 65  IPS-------LQLGFQITDLEKTVQELVKIPGAMCILDPTDMPDG---KKAIVLDPDGHS 114

Query: 131 IEIC 134
           IE+C
Sbjct: 115 IELC 118

>1xrk_A Bleomycin resistance protein; arm exchange, ligand binding protein, thermostable mutant, antibiotic inhibitor; HET: BLM; 1.50A {Streptoalloteichus hindustanus} SCOP: d.32.1.2 PDB: 2zhp_A* 1byl_A Length = 124

 Score = 48.0 bits (114), Expect = 1e-07
 Identities = 17/123 (13%), Positives = 34/123 (27%), Gaps = 21/123 (17%)

Query: 19  LVCRSVEASLDFYQNVLGFFPIRRPGSFDFD-GAWLFNYGMGIHLLKSEEPDNLPKAGKN 77
           L  R V  +++F+ + LGF       S  F    +       + L  S   D +      
Sbjct: 11  LTARDVAEAVEFWTDRLGF-------SRVFVEDDFAGVVRDDVTLFISAVQDQVV----- 58

Query: 78  INPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVD------QLFFHDPDGSMI 131
             P +         +  +     E+     +         +       +    DP G+ +
Sbjct: 59  --PDNTQAWVWVRGLDELYAEWSEVVSTNFRDASGPAMTEIVEQPWGREFALRDPAGNCV 116

Query: 132 EIC 134
              
Sbjct: 117 HFV 119

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1 Length = 144

 Score = 47.4 bits (113), Expect = 2e-07
 Identities = 25/131 (19%), Positives = 49/131 (37%), Gaps = 22/131 (16%)

Query: 14  LNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDF-DGAW-LFNYGMG-------IHLLK 64
           + H  +    ++ S+ FY   LG   +R+   +D  +  + L   G G       + L  
Sbjct: 9   MLHTMIRVGDLDRSIKFYTERLGMKVLRK---WDVPEDKYTLVFLGYGPEMSSTVLELTY 65

Query: 65  SEEPDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFH 124
           +    +        +    HI+   E++  +   +++  +       E G +     F  
Sbjct: 66  NYGVTSY-----KHDEAYGHIAIGVEDVKELVADMRKHDVPIDY-EDESGFM----AFVV 115

Query: 125 DPDGSMIEICN 135
           DPDG  IE+ N
Sbjct: 116 DPDGYYIELLN 126

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii} Length = 339

 Score = 48.9 bits (116), Expect = 2e-07
 Identities = 23/128 (17%), Positives = 40/128 (31%), Gaps = 19/128 (14%)

Query: 11  LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYG-MGIHLLKSEEPD 69
           +  L    L     + +LDF+   LG +   R G       +L  Y       LK  E  
Sbjct: 9   IAHLARAELFSPKPQETLDFFTKFLGMYVTHREG----QSVYLRGYEDPYPWSLKITEAP 64

Query: 70  NLPKAGKNINPKDNHISFQC---ENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDP 126
                         H + +    E +    + L +  +D   S  + G        +  P
Sbjct: 65  ---------EAGMGHAAMRTSSPEALERRAKSLTDGNVDGTWSEDQFGY--GKTFEYQSP 113

Query: 127 DGSMIEIC 134
           DG  +++ 
Sbjct: 114 DGHNLQLL 121

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii} Length = 339

 Score = 45.8 bits (108), Expect = 2e-06
 Identities = 24/145 (16%), Positives = 51/145 (35%), Gaps = 20/145 (13%)

Query: 8   PLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEE 67
            + +K ++H++L+   V A  D ++  LGF    R    + +     +  +  H +    
Sbjct: 148 GIPVKRIDHLNLMSSDVTAVKDSFERHLGFRTTERVVDGNVEIGAWMSSNLLGHEV---- 203

Query: 68  PDNLPKAGKNINPKDNHISFQCENMAIVER---RLKEMKIDYVKSRVEEG-G--INVDQL 121
                +     + K +H++F               ++  I     ++E G          
Sbjct: 204 --ACMRDMTGGHGKLHHLAFFYGTGQHNIDAVEMFRDYDI-----QIEAGPDKHGITQSQ 256

Query: 122 F--FHDPDGSMIEI-CNCDVLPVVP 143
           F    +P G+ IE+      L + P
Sbjct: 257 FLYVFEPGGNRIELFGEAGYLHLDP 281

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A* Length = 309

 Score = 47.9 bits (114), Expect = 4e-07
 Identities = 26/141 (18%), Positives = 42/141 (29%), Gaps = 26/141 (18%)

Query: 14  LNHISLVCRSVEASLDFYQNVLGFFP---IRRPGSFDFDGAWLFNYGMGIHLLKSEEPDN 70
           L+H  L   ++      +  VLGF+    +  P      G WL           S +  +
Sbjct: 152 LDHCLLYGPNIAEVQKIFTEVLGFYLVERVLSPDGDSDMGIWLS---------CSHKVHD 202

Query: 71  LPKAGKNINPKDNHISFQCENMAIVER---RLKEMKIDYVKSRVEEG-G--INVDQLF-- 122
           +         K +H SF  E+   V R    +   ++      V+ G             
Sbjct: 203 IAFVEYPEKGKLHHCSFLLESWEQVLRAGDIMSMNEV-----NVDIGPTRHGVTRGCTIY 257

Query: 123 FHDPDGSMIEICNCDVLPVVP 143
             DP G+  E          P
Sbjct: 258 AWDPSGNRFETF-MGGYHPYP 277

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A* Length = 309

 Score = 46.4 bits (110), Expect = 1e-06
 Identities = 22/128 (17%), Positives = 43/128 (33%), Gaps = 16/128 (12%)

Query: 11  LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIH-LLKSEEPD 69
           +    H  +   ++E  + FY+NVLG     R         +   +    H      E D
Sbjct: 6   VLRPGHAQVRVLNLEEGIHFYRNVLGLVETGRDDQ---GRVYFKCWDERDHSCYIIREAD 62

Query: 70  NLPKAGKNINPKDNHISFQCENMAIVER---RLKEMKIDYVKSRVEEGGINVDQLFFHDP 126
                        +   F+  + A +E+    L+   +   +    E     +++ F  P
Sbjct: 63  ---------TAGIDFFGFKVLDKATLEKLDADLQAYGLTTTRIPAGEMLETGERVRFELP 113

Query: 127 DGSMIEIC 134
            G +IE+ 
Sbjct: 114 SGHLIELY 121

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A* Length = 300

 Score = 47.3 bits (112), Expect = 6e-07
 Identities = 26/137 (18%), Positives = 41/137 (29%), Gaps = 17/137 (12%)

Query: 8   PLCLKSLNHISLVCRSVEASLDFYQNVLGFFP---IRRPGSFDFDGAWLFNYGMGIHLLK 64
               + + H+ L  R    +L FY++VLGF     +R P                     
Sbjct: 137 VTGEQGMGHVVLSTRDDAEALHFYRDVLGFRLRDSMRLPPQMV-GRPADGPPAWLRFFGC 195

Query: 65  SEEPDNLPKAGKNINPKDNHISFQCENMAIVER---RLKEMKIDYVKSRVEEG-G--INV 118
           +    +L       +    H+  + E    V     R    K+      +    G  +N 
Sbjct: 196 NPRHHSLAFLPMPTSSGIVHLMVEVEQADDVGLCLDRALRRKV-----PMSATLGRHVND 250

Query: 119 DQLFF--HDPDGSMIEI 133
             L F    P G  IE 
Sbjct: 251 LMLSFYMKTPGGFDIEF 267

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A* Length = 300

 Score = 40.3 bits (94), Expect = 2e-04
 Identities = 24/132 (18%), Positives = 48/132 (36%), Gaps = 22/132 (16%)

Query: 11  LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIH--LLKSEEP 68
           ++SL ++ +    + A  ++   VLG    +       +GA            ++   E 
Sbjct: 3   IRSLGYLRIEATDMAAWREYGLKVLGMVEGKGAP----EGALYLRMDDFPARLVVVPGEH 58

Query: 69  DNLPKAGKNINPKDNHISFQCENMAIVER---RLKEMKIDYVK-SRVEEGGINVDQLF-F 123
           D L               ++C N   ++    RL      Y + +  E     VD++  F
Sbjct: 59  DRL-----------LEAGWECANAEGLQEIRNRLDLEGTPYKEATAAELADRRVDEMIRF 107

Query: 124 HDPDGSMIEICN 135
            DP G+ +E+ +
Sbjct: 108 ADPSGNCLEVFH 119

>1qto_A Bleomycin-binding protein; arm-exchange, antibiotic inhibitor; 1.50A {Streptomyces verticillus} SCOP: d.32.1.2 PDB: 1jie_A* 1jif_A Length = 122

 Score = 45.6 bits (108), Expect = 7e-07
 Identities = 15/121 (12%), Positives = 32/121 (26%), Gaps = 19/121 (15%)

Query: 19  LVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNLPKAGKNI 78
           L    V A++ F+ + LGF        F    A +    + +H+ ++E            
Sbjct: 11  LTAVDVPANVSFWVDTLGFEKDFGDRDF----AGVRRGDIRLHISRTEHQI--------- 57

Query: 79  NPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVD------QLFFHDPDGSMIE 132
              +     +  +   +                      V       +    DP G+ + 
Sbjct: 58  VADNTSAWIEVTDPDALHEEWARAVSTDYADTSGPAMTPVGESPAGREFAVRDPAGNCVH 117

Query: 133 I 133
            
Sbjct: 118 F 118

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP} Length = 137

 Score = 44.8 bits (106), Expect = 2e-06
 Identities = 17/122 (13%), Positives = 39/122 (31%), Gaps = 5/122 (4%)

Query: 15  NHIS--LVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNLP 72
           +H+   L     + ++D+   V GF  + R  +         + G GI +++        
Sbjct: 2   SHMVVELAYTDPDRAVDWLVRVFGFRLLLRQPAIGTIRHADLDTGGGIVMVRRTGEPYTV 61

Query: 73  KAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIE 132
                   K   +     ++     R      D +   +++    + Q    D +G + E
Sbjct: 62  SCAGGHTCK--QVIVWVSDVDEHFMRSTAAGAD-IVQPLQDKPWGLRQYLVRDLEGHLWE 118

Query: 133 IC 134
             
Sbjct: 119 FT 120

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans} Length = 310

 Score = 45.3 bits (107), Expect = 3e-06
 Identities = 21/131 (16%), Positives = 44/131 (33%), Gaps = 24/131 (18%)

Query: 11  LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIH----LLKSE 66
           +  + ++    +  +A   FY +V G  P+        + AW    G   H    L +++
Sbjct: 6   VTEIRYVGYGVKDFDAEKAFYADVWGLEPVGEDA----NNAWFKAQGADEHHVVQLRRAD 61

Query: 67  EPDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGI----NVDQLF 122
           E               + I+   ++ + V+     ++    K   E   +          
Sbjct: 62  ENR------------IDVIALAADSRSDVDALRASVEAAGCKVASEPAVLATPGGGYGFR 109

Query: 123 FHDPDGSMIEI 133
           F  PDG + E+
Sbjct: 110 FFSPDGLLFEV 120

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans} Length = 310

 Score = 43.3 bits (102), Expect = 1e-05
 Identities = 27/129 (20%), Positives = 45/129 (34%), Gaps = 27/129 (20%)

Query: 14  LNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNLPK 73
           ++HI L   + +  + F+ +VLGF      G F     +L        +     P  L  
Sbjct: 142 ISHIVLHSPNHQDMVKFFTDVLGFKVSDWLGDF---MCFLRCNSAHHRIAILPGPPCL-- 196

Query: 74  AGKNINPKDNHISFQCENMAIVER---RLKEMKIDYVKSRVEEG-G--INVDQLF--FHD 125
                    NH+++   ++  + R   RLK   I      +  G G     +  F  F  
Sbjct: 197 ---------NHVAYDMLSVDDMMRGAHRLKVKGI-----DIGWGPGRHTAGNNTFSYFVT 242

Query: 126 PDGSMIEIC 134
           P G + E  
Sbjct: 243 PGGFVTEYT 251

>3eck_A Protein (homoprotocatechuate 2,3-dioxygenase); oxidoreductase, extradiol, FEII, crystal packing; HET: XXG; 1.60A {Brevibacterium fuscum} SCOP: d.32.1.3 d.32.1.3 PDB: 3ecj_A* 3ojn_A* 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* Length = 365

 Score = 45.4 bits (107), Expect = 4e-06
 Identities = 20/129 (15%), Positives = 39/129 (30%), Gaps = 17/129 (13%)

Query: 11  LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYG-MGIHLLKSEEPD 69
           +    +  LV   +  S +FY +VLG            +  +L ++     H L   +  
Sbjct: 15  ILRCAYAELVVTDLAKSRNFYVDVLGLHVSYEDE----NQIYLRSFEEFIHHNLVLTKGP 70

Query: 70  NLPKAGKNINPKDNHISFQCENMAIVER---RLKEMKIDYVKSRVEEGGINVDQLFFHDP 126
                          ++F+      V++     +E+     + +        D L   DP
Sbjct: 71  ---------VAALKAMAFRVRTPEDVDKAEAYYQELGCRTERRKDGFVKGIGDALRVEDP 121

Query: 127 DGSMIEICN 135
            G   E   
Sbjct: 122 LGFPYEFFF 130

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3 Length = 307

 Score = 44.8 bits (106), Expect = 5e-06
 Identities = 22/141 (15%), Positives = 42/141 (29%), Gaps = 27/141 (19%)

Query: 14  LNHISLVCRSVEASLDFYQNVLGFFP---IRRPGSFDFDGAWLFNYGMGIHLLKSEEPDN 70
            +H  +    + A+ D +  VLGF+    +           +L           S +  +
Sbjct: 151 FDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRV-AQFLS---------LSTKAHD 200

Query: 71  LPKAGKNINPKDNHISFQCENMAIVER---RLKEMKIDYVKSRVEEG-G--INVDQLF-- 122
           +         + +H+SF  E    + R    +           ++ G             
Sbjct: 201 VAFIHHPEKGRLHHVSFHLETWEDLLRAADLISMTDT-----SIDIGPTRHGLTHGKTIY 255

Query: 123 FHDPDGSMIEICNCDVLPVVP 143
           F DP G+  E+  C      P
Sbjct: 256 FFDPSGNRNEVF-CGGDYNYP 275

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3 Length = 307

 Score = 41.0 bits (96), Expect = 9e-05
 Identities = 18/130 (13%), Positives = 39/130 (30%), Gaps = 22/130 (16%)

Query: 12  KSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIH----LLKSEE 67
               H+ L    +  +L+ Y  +LG   + R         +L  +         L +++E
Sbjct: 6   MRPGHVQLRVLDMSKALEHYVELLGLIEMDRDDQ---GRVYLKAWTEVDKFSLVLREADE 62

Query: 68  PDNLPKAGKNINPKDNHISFQCENMAIVER---RLKEMKIDYVKSRVEEGGINVDQLFFH 124
                       P  + + F+  +   + +    L        +    E      ++ F 
Sbjct: 63  ------------PGMDFMGFKVVDEDALRQLERDLMAYGCAVEQLPAGELNSCGRRVRFQ 110

Query: 125 DPDGSMIEIC 134
            P G   E+ 
Sbjct: 111 APSGHHFELY 120

>1ecs_A Bleomycin resistance protein; arm-exchange, antibiotic inhibitor; HET: PG4; 1.70A {Klebsiella pneumoniae} SCOP: d.32.1.2 PDB: 1ewj_A* 1niq_B* 1mh6_A Length = 126

 Score = 43.0 bits (101), Expect = 5e-06
 Identities = 22/122 (18%), Positives = 38/122 (31%), Gaps = 19/122 (15%)

Query: 19  LVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNLPKAGKNI 78
           L  R  +++  FY+  LGF         D     L    + +       P   P A    
Sbjct: 9   LPSRDFDSTAAFYER-LGF----GIVFRDAGWMILQRGDLMLEF--FAHPGLDPLA---- 57

Query: 79  NPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQ------LFFHDPDGSMIE 132
                    + +++A   R+ K + I    S          Q          DPDG+++ 
Sbjct: 58  --SWFSCCLRLDDLAEFYRQCKSVGIQETSSGYPRIHAPELQGWGGTMAALVDPDGTLLR 115

Query: 133 IC 134
           + 
Sbjct: 116 LI 117

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A Length = 323

 Score = 44.6 bits (105), Expect = 6e-06
 Identities = 20/132 (15%), Positives = 41/132 (31%), Gaps = 23/132 (17%)

Query: 11  LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIH----LLKSE 66
           +    ++ +V   +  S +FY +VLG            +  +L +    IH    L +  
Sbjct: 15  IVRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDE----NTIYLRSLEEFIHHNLVLRQGP 70

Query: 67  EPDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGI---NVDQLFF 123
                              +++ ++ A V+      K    ++   + G      D +  
Sbjct: 71  IAA------------VAAFAYRVKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRV 118

Query: 124 HDPDGSMIEICN 135
            DP G   E   
Sbjct: 119 EDPLGFPYEFFY 130

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A Length = 323

 Score = 40.3 bits (94), Expect = 1e-04
 Identities = 26/128 (20%), Positives = 44/128 (34%), Gaps = 20/128 (15%)

Query: 14  LNHISLVCRSVEASLDFYQNVLGFFP---IRRPGSFDFDGAWLFNYGMGIHLLKSEEPDN 70
           L+H + V   V     + +  LGF     I+      +  AW+           +     
Sbjct: 153 LDHFNQVTPDVPRGRAYLE-DLGFRVSEDIKDSDGVTY-AAWMHRKQTVHDTALTGGNG- 209

Query: 71  LPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVE--EGGINVDQ---LFFHD 125
                    P+ +H++F       + +   +M    +  R+E   G   V     L+  D
Sbjct: 210 ---------PRMHHVAFATHEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILD 260

Query: 126 PDGSMIEI 133
           PDG  IEI
Sbjct: 261 PDGHRIEI 268

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A Length = 305

 Score = 44.6 bits (105), Expect = 7e-06
 Identities = 21/130 (16%), Positives = 42/130 (32%), Gaps = 18/130 (13%)

Query: 11  LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDN 70
           +  L ++ L   +++A  D+   ++G   +        D           H +       
Sbjct: 4   VTELGYLGLSVSNLDAWRDYAAGIMGMQVVDDGE----DDRIYLRMDRWHHRIVLHADG- 58

Query: 71  LPKAGKNINPKDNHISFQCENMAIVER---RLKEMKIDY-VKSRVEEGGINVDQLF-FHD 125
                   +    +I ++      ++    +LK   I + V S  +     V  L   HD
Sbjct: 59  --------SDDLAYIGWRVAGPVELDELAEQLKNAGIPFEVASDADAAERRVLGLVKLHD 110

Query: 126 PDGSMIEICN 135
           P G+  EI  
Sbjct: 111 PGGNPTEIFY 120

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A Length = 305

 Score = 43.4 bits (102), Expect = 1e-05
 Identities = 25/138 (18%), Positives = 49/138 (35%), Gaps = 19/138 (13%)

Query: 14  LNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNLPK 73
           L HI +    VE +  FY+ +LG            +GA        + +  ++   +L  
Sbjct: 147 LGHIIIREDDVEEATRFYR-LLGLEGAVEYKFALPNGAVGT----PVFMHCNDRHHSLAF 201

Query: 74  AGKNINPKDNHISFQCENMAIVER---RLKEMKIDYVKSRVEEG-G--INVDQLFF--HD 125
               ++ + NH+  +  ++  +      +++ KI      V    G   N + L F   +
Sbjct: 202 GVGPMDKRINHLMIEYTHLDDLGYAHDLVRQQKI-----DVTLQIGKHSNDEALTFYCAN 256

Query: 126 PDGSMIEICNCDVLPVVP 143
           P G + E       P   
Sbjct: 257 PSGWLWEPG-WGSRPAPA 273

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A* Length = 297

 Score = 44.1 bits (104), Expect = 7e-06
 Identities = 21/143 (14%), Positives = 36/143 (25%), Gaps = 29/143 (20%)

Query: 14  LNHISLVCRSVEASLDFYQNVLGFFP---IRRPGSFDFDGAWLFNYGMGIH----LLKSE 66
           L H        + +L FY +VLGF     I      D      F +    H    +    
Sbjct: 143 LGHFVRCVPDSDKALAFYTDVLGFQLSDVIDMKMGPDVTVPAYFLHCNERHHTLAIAAFP 202

Query: 67  EPDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGI----NVDQLF 122
            P            + +H   +  ++  V      +        +    +    N   + 
Sbjct: 203 LP-----------KRIHHFMLEVASLDDVGFAFDRVD----ADGLITSTLGRHTNDHMVS 247

Query: 123 --FHDPDGSMIEICNCDVLPVVP 143
                P G  +E        V  
Sbjct: 248 FYASTPSGVEVEYG-WSARTVDR 269

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A* Length = 297

 Score = 43.7 bits (103), Expect = 1e-05
 Identities = 26/170 (15%), Positives = 46/170 (27%), Gaps = 27/170 (15%)

Query: 11  LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMG--IHLLKSEEP 68
           ++SL ++      V A   F    LG            +G           I + + E  
Sbjct: 2   IRSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTD----NGDLFRIDSRAWRIAVQQGEVD 57

Query: 69  DNLPKAGKNINPKDNHISFQCENMAIVER---RLKEMKIDYVKSRVEEGGI-NVDQLF-F 123
           D                 ++  + A + +   +LK+  I              V  L  F
Sbjct: 58  D------------LAFAGYEVADAAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITF 105

Query: 124 HDPDGSMIEICN----CDVLPVVPLAGDAVRIRSCTSTVNCNFHQQQIQQ 169
            DP G  +EI          P +P A  +  +       +         +
Sbjct: 106 ADPFGLPLEIYYGASEVFEKPFLPGAAVSGFLTGEQGLGHFVRCVPDSDK 155

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B* Length = 292

 Score = 43.8 bits (103), Expect = 9e-06
 Identities = 22/168 (13%), Positives = 46/168 (27%), Gaps = 23/168 (13%)

Query: 11  LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDN 70
           ++ L ++    + V A   F    +G       G    D A          +        
Sbjct: 2   IERLGYLGFAVKDVPAWDHFLTKSVGLMAAGSAG----DAALYRADQRAWRIAVQPGEL- 56

Query: 71  LPKAGKNINPKDNHISFQCENMAIVER---RLKEMKIDYVK-SRVEEGGINVDQLF-FHD 125
                        +   + ++ A +ER   +L++  + + +          V  L    D
Sbjct: 57  ---------DDLAYAGLEVDDAAALERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQD 107

Query: 126 PDGSMIEICN----CDVLPVVPLAGDAVRIRSCTSTVNCNFHQQQIQQ 169
           P G  +EI          P +P A  +  +       +         +
Sbjct: 108 PFGLPLEIYYGPAEIFHEPFLPSAPVSGFVTGDQGIGHFVRCVPDTAK 155

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B* Length = 292

 Score = 41.9 bits (98), Expect = 4e-05
 Identities = 21/141 (14%), Positives = 34/141 (24%), Gaps = 24/141 (17%)

Query: 14  LNHISLVCRSVEASLDFYQNVLGFFP---IRRP-GSFDFDGAWLFNYGMGIHLLKSEEPD 69
           + H          ++ FY  VLGF     I    G      A   +     H        
Sbjct: 143 IGHFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNGRHH-------- 194

Query: 70  NLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVE-EGGI---NVDQ---LF 122
            +  A   I  + +H   Q   +  V         D + +       +     DQ    +
Sbjct: 195 TIALAAFPIPKRIHHFMLQANTIDDVGYAF-----DRLDAAGRITSLLGRHTNDQTLSFY 249

Query: 123 FHDPDGSMIEICNCDVLPVVP 143
              P   +          V  
Sbjct: 250 ADTPSPMIEVEFGWGPRTVDS 270

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A Length = 302

 Score = 41.9 bits (98), Expect = 4e-05
 Identities = 16/130 (12%), Positives = 34/130 (26%), Gaps = 18/130 (13%)

Query: 11  LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDN 70
           +  L ++ +  +  +A   F  ++LG   +           +        H +       
Sbjct: 7   VIELGYMGISVKDPDAWKSFATDMLGLQVLDEGE----KDRFYLRMDYWHHRIVVHHNG- 61

Query: 71  LPKAGKNINPKDNHISFQCENMAIVER---RLKEMKIDYVKSRVEEGGI-NVDQLF-FHD 125
                        ++ ++       E    +L +           E     V  L    D
Sbjct: 62  --------QDDLEYLGWRVAGKPEFEALGQKLIDAGYKIRICDKVEAQERMVLGLMKTED 113

Query: 126 PDGSMIEICN 135
           P G+  EI  
Sbjct: 114 PGGNPTEIFW 123

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A Length = 302

 Score = 38.8 bits (90), Expect = 5e-04
 Identities = 21/138 (15%), Positives = 41/138 (29%), Gaps = 19/138 (13%)

Query: 14  LNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNLPK 73
           L H  +    V  +  FY ++LGF           +G           +  +    ++  
Sbjct: 150 LGHCIVRQTDVAEAHKFY-SLLGFRGDVEYRIPLPNGMTAE----LSFMHCNARDHSIAF 204

Query: 74  AGKNINPKDNHISFQCENMAIVER---RLKEMKIDYVKSRVEEG-G--INVDQLFF--HD 125
                  + NH+  +  +M  +     +  + +I      +    G   N   L F    
Sbjct: 205 GAMPAAKRLNHLMLEYTHMEDLGYTHQQFVKNEI-----DIALQLGIHANDKALTFYGAT 259

Query: 126 PDGSMIEICNCDVLPVVP 143
           P G +IE         + 
Sbjct: 260 PSGWLIEPG-WRGATAID 276

>3bt3_A Glyoxalase-related enzyme, ARAC type; VOC superfamily, PSI-2, NYSGXRC, structural genomics, prote structure initiative; 2.50A {Clostridium phytofermentans} Length = 148

 Score = 38.9 bits (90), Expect = 2e-04
 Identities = 13/119 (10%), Positives = 34/119 (28%), Gaps = 6/119 (5%)

Query: 19  LVCRSVEASLDFYQNVLGF---FPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNLPKAG 75
              + ++ ++ +++ +LG+      R    F   G              +         G
Sbjct: 27  YFTKDMDKTVKWFEEILGWSGDIVARDDEGFGDYGCVFDYPSEVAVAHLTPFRGFHLFKG 86

Query: 76  KNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEIC 134
           + I           E +  + + +KE   D +   +        +      DG ++   
Sbjct: 87  EPIKG--VAGFMMIEGIDALHKYVKENGWDQISD-IYTQPWGARECSITTTDGCILRFF 142

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	194
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	99.89
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	99.89
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	99.88
3huh_A	152	Virulence protein STM3117; structural genomics, ny	99.86
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	99.85
2p25_A	126	Glyoxalase family protein; structural genomics, MC	99.85
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	99.85
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	99.85
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	99.84
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	99.84
3ghj_A	141	Putative integron gene cassette protein; integron	99.84
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	99.84
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	99.83
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	99.83
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	99.83
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	99.83
4hc5_A	133	Glyoxalase/bleomycin resistance protein/dioxygena;	99.83
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	99.82
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	99.82
3rri_A	135	Glyoxalase/bleomycin resistance protein/dioxygena;	99.82
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	99.82
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	99.81
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	99.81
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	99.81
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	99.81
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	99.81
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	99.81
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	99.81
1nki_A	135	Probable fosfomycin resistance protein; potassium	99.8
3vw9_A	187	Lactoylglutathione lyase; glyoxalase, lyase-lyase	99.8
2i7r_A	118	Conserved domain protein; structural genomics cons	99.8
2r6u_A	148	Uncharacterized protein; structural genomics, PSI-	99.79
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	99.79
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	99.79
4gym_A	149	Glyoxalase/bleomycin resistance protein/dioxygena;	99.79
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	99.79
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	99.79
3m2o_A	164	Glyoxalase/bleomycin resistance protein; unknown f	99.79
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	99.78
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	99.78
1xrk_A	124	Bleomycin resistance protein; arm exchange, ligand	99.78
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	99.78
1qto_A	122	Bleomycin-binding protein; arm-exchange, antibioti	99.77
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	99.77
3fcd_A	134	Lyase, ORF125EGC139; lactoylglutathione lyase, YEC	99.77
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	99.77
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	99.76
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	99.76
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	99.75
1ecs_A	126	Bleomycin resistance protein; arm-exchange, antibi	99.74
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	99.74
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	99.74
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	99.73
4ghg_A	365	Homoprotocatechuate 2,3-dioxygenase; oxygen activa	99.73
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	99.72
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	99.72
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	99.71
3bt3_A	148	Glyoxalase-related enzyme, ARAC type; VOC superfam	99.71
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	99.69
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	99.68
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	99.68
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	99.68
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	99.67
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	99.67
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	99.66
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	99.66
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	99.66
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	99.66
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	99.65
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	99.65
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	99.64
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	99.64
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	99.64
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	99.64
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	99.62
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	99.62
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	99.61
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	99.61
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	99.6
3zi1_A	330	Glyoxalase domain-containing protein 4; isomerase;	99.59
3zi1_A	330	Glyoxalase domain-containing protein 4; isomerase;	99.59
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	99.58
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	99.56
1t47_A	381	4-hydroxyphenylpyruvate dioxygenase; triketone inh	99.56
2r5v_A	357	PCZA361.1; dioxygenase, non-heme iron, vancomycin,	99.52
1xy7_A	166	Unknown protein; structural genomics, protein stru	99.51
2r5v_A	357	PCZA361.1; dioxygenase, non-heme iron, vancomycin,	99.46
2zw5_A	301	Bleomycin acetyltransferase; dimer, two domains; H	99.45
4ghg_A	365	Homoprotocatechuate 2,3-dioxygenase; oxygen activa	99.44
1sqd_A	424	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.4
1u6l_A	149	Hypothetical protein; structural genomics, PSI, pr	99.33
1u7i_A	136	Hypothetical protein; structural genomics, PA1358,	99.31
1sp8_A	418	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.3
1t47_A	381	4-hydroxyphenylpyruvate dioxygenase; triketone inh	99.29
3e0r_A	244	C3-degrading proteinase (CPPA protein); MCSG, PSI,	99.29
1cjx_A	357	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.28
3isq_A	393	4-hydroxyphenylpyruvate dioxygenase; tyrosine meta	99.26
1cjx_A	357	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.21
1tsj_A	139	Conserved hypothetical protein; structural genomic	99.2
3l20_A	172	Putative uncharacterized protein; hypothetical pro	99.15
1sp8_A	418	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.09
1sqd_A	424	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.08
3oms_A	138	PHNB protein; structural genomics, PSI-2, protein	99.0
3isq_A	393	4-hydroxyphenylpyruvate dioxygenase; tyrosine meta	98.96
3opy_B	941	6-phosphofructo-1-kinase beta-subunit; ATP binding	98.19
1u69_A	163	Hypothetical protein; structural genomics, MSCG, p	97.71
3p8a_A	274	Uncharacterized protein; mainly antiparallel beta	97.04
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	96.55
3e0r_A	244	C3-degrading proteinase (CPPA protein); MCSG, PSI,	96.5
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	95.58
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	95.35
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	94.79
2p25_A	126	Glyoxalase family protein; structural genomics, MC	94.58
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	94.54
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	94.52
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	94.3
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	94.03
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	92.79
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	92.77
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	92.26
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	91.97
3ghj_A	141	Putative integron gene cassette protein; integron	91.51
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	91.41
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	91.27
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	90.65
3vw9_A	187	Lactoylglutathione lyase; glyoxalase, lyase-lyase	90.34
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	89.9
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	89.42
3p8a_A	274	Uncharacterized protein; mainly antiparallel beta	89.04
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	88.65
3opy_A	989	6-phosphofructo-1-kinase alpha-subunit; ATP bindin	88.58
3huh_A	152	Virulence protein STM3117; structural genomics, ny	87.1
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	86.17
4hc5_A	133	Glyoxalase/bleomycin resistance protein/dioxygena;	85.89
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	85.25
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	85.24
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	84.82
3rri_A	135	Glyoxalase/bleomycin resistance protein/dioxygena;	84.62
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	84.61
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	84.61
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	84.16
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	83.46
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	80.8
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	80.64
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	80.62
1k4n_A	192	Protein EC4020, protein YECM; structural genomics,	80.53
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	80.22

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A*

Probab=99.89  E-value=8.9e-22  Score=141.67  Aligned_cols=127  Identities=20%  Similarity=0.372  Sum_probs=98.8

Q ss_pred             CCCCcccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeCCcEEEEeecCCCCCCCCCCCCCCCCccE
Q 029385            5 VENPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNH   84 (194)
Q Consensus         5 ~~~~~~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~~h   84 (194)
                      +..+|.+++|+|+.|.|+|++++++||+++|||++..+..    ...++...+..+.+........ +... ....+..|
T Consensus         2 ~~~~m~~~~i~hi~l~v~D~~~a~~FY~~~lG~~~~~~~~----~~~~~~~~~~~~~l~~~~~~~~-~~~~-~~~~~~~~   75 (133)
T 3ey7_A            2 MEFLMKISHLDHLVLTVADIPTTTNFYEKVLGMKAVSFGA----GRIALEFGHQKINLHQLGNEFE-PKAQ-NVRVGSAD   75 (133)
T ss_dssp             CSCCCCCCEEEEEEEEESCHHHHHHHHHHHHCCEEEEETT----TEEEEEETTEEEEEEETTSCCS-SCCT-TCCTTCCE
T ss_pred             CceEeEecccCEEEEEECCHHHHHHHHHHccCceEEEecC----CeEEEEcCCEEEEEEcCCCCcc-ccCC-CCCCCccE
Confidence            3456889999999999999999999999999999998863    4455555666777776543321 1111 44567899


Q ss_pred             EEEeeCC-HHHHHHHHHhCCCeEEccceecCc--cceEEEEEeCCCCCEEEEEecC
Q 029385           85 ISFQCEN-MAIVERRLKEMKIDYVKSRVEEGG--INVDQLFFHDPDGSMIEICNCD  137 (194)
Q Consensus        85 iaf~v~d-l~~~~~~l~~~Gi~~~~~~~~~~g--~~~~~~~~~DPDG~~iEi~~~~  137 (194)
                      ++|.|+| +++++++|+++|+++..++....+  .+.+.+||+|||||.|||++..
T Consensus        76 ~~~~v~dd~~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~~~  131 (133)
T 3ey7_A           76 LCFITDTVLSDAMKHVEDQGVTIMEGPVKRTGAQGAITSFYFRDPDGNLIEVSTYS  131 (133)
T ss_dssp             EEEECSSCHHHHHHHHHHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEEESC
T ss_pred             EEEEeCcHHHHHHHHHHHCCCccccCCccccCCCCCeEEEEEECCCCCEEEEEecC
Confidence            9999997 999999999999998876543322  2348999999999999999864

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}

Probab=99.89  E-value=1.5e-21  Score=144.07  Aligned_cols=132  Identities=24%  Similarity=0.295  Sum_probs=97.9

Q ss_pred             CCCCCcccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCC--------CCcceEEEEe-CCcEEEEeecCCCCCCCCC
Q 029385            4 SVENPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGS--------FDFDGAWLFN-YGMGIHLLKSEEPDNLPKA   74 (194)
Q Consensus         4 ~~~~~~~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~--------~~~~~~~~~~-~g~~~~l~~~~~~~~~~~~   74 (194)
                      ..+.++++++|+||.|.|+|++++++||+++|||++..+...        ......++.. .+..++++...........
T Consensus        10 ~~~~~~~~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~   89 (156)
T 3kol_A           10 SVLAPGNLRKVHHIALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASGKVANFITPDGTILDLFGEPELSPPDPN   89 (156)
T ss_dssp             CCCCTTSSCCCCEEEEEESCHHHHHHHHTTTSCCEECCTTTSCTTTHHHHHTTSEEEEECTTSCEEEEEECTTCCCSSSS
T ss_pred             cccCccccceEeEEEEEeCCHHHHHHHHHhhcCCEEEeecccCcchhcccCCCcEEEEEeCCCCEEEEEecCCCCcCCCC
Confidence            345667899999999999999999999999999999873211        0112344433 3467788876543222111


Q ss_pred             CCCCCCCccEEEEeeC--CHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEecC
Q 029385           75 GKNINPKDNHISFQCE--NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD  137 (194)
Q Consensus        75 ~~~~~~g~~hiaf~v~--dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~  137 (194)
                      ......+..|++|.|+  |+++++++|++.|+++...+.... ++ +.+||+|||||.|||++.+
T Consensus        90 ~~~~~~~~~h~~~~v~~~d~~~~~~~l~~~G~~~~~~~~~~~-~g-~~~~~~DPdG~~iel~~~~  152 (156)
T 3kol_A           90 PEKTFTRAYHLAFDIDPQLFDRAVTVIGENKIAIAHGPVTRP-TG-RGVYFYDPDGFMIEIRCDP  152 (156)
T ss_dssp             TTCCCSSCCEEEEECCGGGHHHHHHHHHHTTCCEEEEEEEC--CC-EEEEEECTTSCEEEEEECC
T ss_pred             CCCCCCceEEEEEEecHHHHHHHHHHHHHCCCccccCceecC-Cc-cEEEEECCCCCEEEEEecC
Confidence            1234568899999999  999999999999999886664443 33 6999999999999999864

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans}

Probab=99.88  E-value=2.4e-21  Score=138.99  Aligned_cols=125  Identities=22%  Similarity=0.308  Sum_probs=92.6

Q ss_pred             cccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcc--eEEEEeCCcEEEEeec-------CCCCCCCCCCCCCC
Q 029385            9 LCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFD--GAWLFNYGMGIHLLKS-------EEPDNLPKAGKNIN   79 (194)
Q Consensus         9 ~~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~--~~~~~~~g~~~~l~~~-------~~~~~~~~~~~~~~   79 (194)
                      |++++|+||.|.|+|++++++||+++|||++..+....+..  ..++...+..++++..       ......+..+ ...
T Consensus         1 M~i~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~-~~~   79 (134)
T 3l7t_A            1 MKLKAVHHVALIVSDYDKSYEFYVNQLGFEVIRENHRPKRHDYKLDLKCGDIELEIFGNKLTDSNYCAPPERISWP-REA   79 (134)
T ss_dssp             -CCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEETTTTEEEEEEEETTEEEEEEECCTTSTTCCCCCCCCCSS-SCC
T ss_pred             CceeeEeEEEEEeCCHHHHHHHHHHhcCCEEEEEeecCCCcceEEEEecCCeEEEEEecccccccccCCccccCCC-CCC
Confidence            57899999999999999999999999999998765322211  2344445667788872       2221111111 245


Q ss_pred             CCccEEEEeeCCHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEe
Q 029385           80 PKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICN  135 (194)
Q Consensus        80 ~g~~hiaf~v~dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~  135 (194)
                      .+..|++|.|+|+++++++|+++|+++...+... ..+.+.+||+|||||.|||++
T Consensus        80 ~g~~~~~~~v~d~~~~~~~l~~~G~~~~~~~~~~-~~g~~~~~~~DPdG~~iel~e  134 (134)
T 3l7t_A           80 CGLRHLAFYVEDVEASRQELIALGIRVEEVRYDD-YTGKKMAFFFDPDGLPLELHE  134 (134)
T ss_dssp             SEEEEEEEECSCHHHHHHHHHHHTCCCCCCEECT-TSCCEEEEEECTTCCEEEEEC
T ss_pred             CCeEEEEEEECCHHHHHHHHHhCCCcccceeccC-CCceEEEEEECCCCCEEEEeC
Confidence            6788999999999999999999999987655332 233489999999999999985

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygen virulence, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A

Probab=99.86  E-value=9.5e-21  Score=140.33  Aligned_cols=127  Identities=24%  Similarity=0.392  Sum_probs=94.9

Q ss_pred             CCCcccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeCCcEEEEeecCCCCCCCCCCCCCCCCccEE
Q 029385            6 ENPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHI   85 (194)
Q Consensus         6 ~~~~~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~~hi   85 (194)
                      ..+|.+.+|+||.|.|+|++++++||+++|||++..+.+    ...++...+..+.+........ +... ....+..|+
T Consensus        16 ~~~m~i~~l~hv~l~v~D~~~a~~FY~~vLG~~~~~~~~----~~~~l~~~~~~l~l~~~~~~~~-~~~~-~~~~g~~hi   89 (152)
T 3huh_A           16 SIQMIIDRIDHLVLTVSDISTTIRFYEEVLGFSAVTFKQ----NRKALIFGAQKINLHQQEMEFE-PKAS-RPTPGSADL   89 (152)
T ss_dssp             ----CEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEETT----TEEEEEETTEEEEEEETTBCCS-SCCS-SCCTTCCEE
T ss_pred             cCCcccceeeEEEEEeCCHHHHHHHHHhcCCCEEEEccC----CeEEEEeCCeEEEEeccCCcCC-CcCc-CCCCCccEE
Confidence            345789999999999999999999999999999998853    4555555666677776543211 1111 345678999


Q ss_pred             EEeeC-CHHHHHHHHHhCCCeEEccceecCc--cceEEEEEeCCCCCEEEEEecCC
Q 029385           86 SFQCE-NMAIVERRLKEMKIDYVKSRVEEGG--INVDQLFFHDPDGSMIEICNCDV  138 (194)
Q Consensus        86 af~v~-dl~~~~~~l~~~Gi~~~~~~~~~~g--~~~~~~~~~DPDG~~iEi~~~~~  138 (194)
                      +|.++ |+++++++|++.|+++..++....+  ...+.+||.|||||.|||++..+
T Consensus        90 ~f~~~~dl~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdG~~iEl~~~~~  145 (152)
T 3huh_A           90 CFITSTPINDVVSEILQAGISIVEGPVERTGATGEIMSIYIRDPDGNLIEISQYVE  145 (152)
T ss_dssp             EEEESSCHHHHHHHHHHTTCCCSEEEEEEEETTEEEEEEEEECTTCCEEEEEEC--
T ss_pred             EEEecCCHHHHHHHHHHCCCeEecCCccccCCCCcEEEEEEECCCCCEEEEEeccc
Confidence            99998 9999999999999998776543322  12489999999999999998653

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A

Probab=99.85  E-value=8.7e-21  Score=137.08  Aligned_cols=125  Identities=14%  Similarity=0.210  Sum_probs=91.5

Q ss_pred             ccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCC---CCCcceEEEEeCCcEEEEeecCCCCCCCCCCCCCCCCccEEE
Q 029385           10 CLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPG---SFDFDGAWLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHIS   86 (194)
Q Consensus        10 ~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~---~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~~hia   86 (194)
                      ++++|+||+|.|+|++++++||+ +|||++..+..   .......|+...+..+++++...+............+..|++
T Consensus         4 M~~~i~hv~i~v~Dl~~a~~FY~-~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~g~~hia   82 (133)
T 3hdp_A            4 MSLKVHHIGYAVKNIDSALKKFK-RLGYVEESEVVRDEVRKVYIQFVINGGYRVELVAPDGEDSPINKTIKKGSTPYHIC   82 (133)
T ss_dssp             CCCCEEEEEEECSCHHHHHHHHH-HTTCEECSCCEEETTTTEEEEEEEETTEEEEEEEESSTTCTHHHHTTTSCEEEEEE
T ss_pred             cceeeCEEEEEECCHHHHHHHHH-HcCCeeecceeccCCcceEEEEEeCCCEEEEEEecCCCCChHHHHHhcCCceEEEE
Confidence            46789999999999999999999 99999876531   111123444455677888876543221100001156788999


Q ss_pred             EeeCCHHHHHHHHHhCCCeEEccceec-CccceEEEEEeCCCCCEEEEEe
Q 029385           87 FQCENMAIVERRLKEMKIDYVKSRVEE-GGINVDQLFFHDPDGSMIEICN  135 (194)
Q Consensus        87 f~v~dl~~~~~~l~~~Gi~~~~~~~~~-~g~~~~~~~~~DPDG~~iEi~~  135 (194)
                      |.|+|+++++++|++.|+++...+... ...+.+.+|++|||||+|||++
T Consensus        83 f~v~di~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~dPdG~~iEl~e  132 (133)
T 3hdp_A           83 YEVEDIQKSIEEMSQIGYTLFKKAEIAPAIDNRKVAFLFSTDIGLIELLE  132 (133)
T ss_dssp             EEESCHHHHHHHHTTTTEEEEEEEEEEGGGTTEEEEEEEETTTEEEEEEE
T ss_pred             EEcCCHHHHHHHHHHcCCccccCCeecccCCCceEEEEECCCceEEEEec
Confidence            999999999999999999988754322 2234589999999999999987

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis}

Probab=99.85  E-value=1.6e-20  Score=133.69  Aligned_cols=124  Identities=23%  Similarity=0.299  Sum_probs=90.2

Q ss_pred             cccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcc--eEEEEeCCcEEEEeecCCCCCCCCCCCCCCCCccEEE
Q 029385            9 LCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFD--GAWLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHIS   86 (194)
Q Consensus         9 ~~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~--~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~~hia   86 (194)
                      |++++++|+.|.|+|++++.+||+++|||++..+....+..  ..++...+..++|+....+...+..  ....+..|++
T Consensus         1 M~~~~i~hi~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~--~~~~g~~~~~   78 (126)
T 2p25_A            1 MFFKEIHHVAINASNYQATKNFYVEKLGFEVLRENHRPEKNDIKLDLKLGSQELEIFISDQFPARPSY--PEALGLRHLA   78 (126)
T ss_dssp             CTTSCCCCEEEEESCHHHHHHHHTTTTCCEEEEEEEEGGGTEEEEEEEETTEEEEEEECTTCCCCCCS--SCCSSCCCEE
T ss_pred             CcccccceEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCcceEEEEecCCeEEEEEeccCCCCCCCC--CCCccceEEE
Confidence            46889999999999999999999999999987653111111  1233334446777765433222211  2345778999


Q ss_pred             EeeCCHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEe
Q 029385           87 FQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICN  135 (194)
Q Consensus        87 f~v~dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~  135 (194)
                      |.|+|+++++++|++.|+++...+.. ...+.+.+||+|||||.|||++
T Consensus        79 ~~v~d~~~~~~~l~~~G~~~~~~~~~-~~~g~~~~~~~DPdG~~iel~e  126 (126)
T 2p25_A           79 FKVEHIEEVIAFLNEQGIETEPLRVD-DFTGKKMTFFFDPDGLPLELHE  126 (126)
T ss_dssp             EECSCHHHHHHHHHHTTCCCCCCEEC-TTTCCEEEEEECTTCCEEEEEC
T ss_pred             EEeCCHHHHHHHHHHcCCcccccccc-CCCCcEEEEEECCCCCEEEeeC
Confidence            99999999999999999998765432 2233489999999999999975

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila}

Probab=99.85  E-value=2.3e-21  Score=144.71  Aligned_cols=123  Identities=16%  Similarity=0.242  Sum_probs=85.3

Q ss_pred             ccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEE-Ee-C-C-cEEEEe-ecCCCCC-CCCCCCCCCCCcc
Q 029385           10 CLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWL-FN-Y-G-MGIHLL-KSEEPDN-LPKAGKNINPKDN   83 (194)
Q Consensus        10 ~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~-~~-~-g-~~~~l~-~~~~~~~-~~~~~~~~~~g~~   83 (194)
                      ..++|+|++|.|+|+++|++||+++|||++..+....  ...|. .. . + ....++ ....... .+........+..
T Consensus        23 ~~Mri~~v~I~V~Dle~A~~FY~dvLGf~v~~d~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~~  100 (155)
T 4g6x_A           23 NAMRIHLTNVFVDDQAKAESFYTGKLGFLVKADVPVG--ADRWLTVVSPEAPDGTQLLLEPSSHAAVTPFKEALVADGIP  100 (155)
T ss_dssp             CCCCCCEEEEEESCHHHHHHHHHHTTCCEEEEEEEET--TEEEEEEECTTCTTSCEEEEEECCSTTHHHHHHHHHHTTCC
T ss_pred             CceEEEEEEEEeCCHHHHHHHHHHHhCCEEEEeecCC--CceEEEEeccCCCcceEEEeccCCCccccccccccccCCce
Confidence            3557899999999999999999999999987654322  22232 22 1 1 222222 2211111 0000012234678


Q ss_pred             EEEEeeCCHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEec
Q 029385           84 HISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC  136 (194)
Q Consensus        84 hiaf~v~dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~  136 (194)
                      |++|.|+|+++++++|+++|+++..++...++ + +.+||+|||||.|||++.
T Consensus       101 ~l~f~VdDvda~~~~l~~~Gv~~~~~p~~~~~-g-~~~~f~DPdGn~iel~q~  151 (155)
T 4g6x_A          101 AASFAVDDIAAEYERLSALGVRFTQEPTDMGP-V-VTAILDDTCGNLIQLMQI  151 (155)
T ss_dssp             SEEEEESCHHHHHHHHHHTTCCEEEEEEECSS-C-EEEEEECSSSCEEEEEEC
T ss_pred             EEEeeechhhhhhhHHhcCCcEEeeCCEEcCC-e-EEEEEECCCCCEEEEEEE
Confidence            99999999999999999999999887755443 3 889999999999999985

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens}

Probab=99.85  E-value=3.9e-20  Score=136.75  Aligned_cols=124  Identities=23%  Similarity=0.356  Sum_probs=93.3

Q ss_pred             CCcccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeCCcEEEEeecCCCCCCCCCCCCCCCCccEEE
Q 029385            7 NPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHIS   86 (194)
Q Consensus         7 ~~~~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~~hia   86 (194)
                      ++|.+++|+||.|.|+|++++++||+++|||++..+.+    ...++...+..+.+........ +... ...++..|++
T Consensus        21 ~~m~i~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~----~~~~l~~g~~~l~l~~~~~~~~-~~~~-~~~~g~~~~~   94 (147)
T 3zw5_A           21 QSMLIRRLDHIVMTVKSIKDTTMFYSKILGMEVMTFKE----DRKALCFGDQKFNLHEVGKEFE-PKAA-HPVPGSLDIC   94 (147)
T ss_dssp             HHTSCEEEEEEEEEESCHHHHHHHHHHHHCCEEEEETT----TEEEEEETTEEEEEEETTSCCS-SCCS-SCCTTCCEEE
T ss_pred             cceecccccEEEEEeCCHHHHHHHHHHhcCCEEEecCC----CceEEEECCcEEEEEEcCCCcC-cccC-CCCCCCceEE
Confidence            45789999999999999999999999999999987654    3455555555666665433211 1111 3345778999


Q ss_pred             EeeC-CHHHHHHHHHhCCCeEEccceecCc--cceEEEEEeCCCCCEEEEEec
Q 029385           87 FQCE-NMAIVERRLKEMKIDYVKSRVEEGG--INVDQLFFHDPDGSMIEICNC  136 (194)
Q Consensus        87 f~v~-dl~~~~~~l~~~Gi~~~~~~~~~~g--~~~~~~~~~DPDG~~iEi~~~  136 (194)
                      |.+. |+++++++|++.|+++...+....+  ...+.+||+|||||.|||+++
T Consensus        95 ~~~~~dl~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdGn~iEl~~y  147 (147)
T 3zw5_A           95 LITEVPLEEMIQHLKACDVPIEEGPVPRTGAKGPIMSIYFRDPDRNLIEVSNY  147 (147)
T ss_dssp             EECSSCHHHHHHHHHHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEEEC
T ss_pred             EEeccCHHHHHHHHHHcCCceeeCcccccCCCCceEEEEEECCCCCEEEEecC
Confidence            9886 9999999999999998765543221  223789999999999999873

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi}

Probab=99.84  E-value=8e-21  Score=140.83  Aligned_cols=137  Identities=19%  Similarity=0.227  Sum_probs=99.8

Q ss_pred             cccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeCCcEEEEeecCCCCCCCCCCCCCCCCccEEEEe
Q 029385            9 LCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQ   88 (194)
Q Consensus         9 ~~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~~hiaf~   88 (194)
                      |++++|+|+.|.|+|++++++||+++|||++..+.+    ...++...+..+.+............+.....+..|++|.
T Consensus         1 MM~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~----~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~l~f~   76 (150)
T 3bqx_A            1 MSLQQVAVITLGIGDLEASARFYGEGFGWAPVFRNP----EIIFYQMNGFVLATWLVQNLQEDVGVAVTSRPGSMALAHN   76 (150)
T ss_dssp             --CCCCCEEEEEESCHHHHHHHHHHTSCCCCSEECS----SEEEEECSSSEEEEEEHHHHHHHHSSCCCSSCCSCEEEEE
T ss_pred             CCccceEEEEEEcCCHHHHHHHHHHhcCCEeecCCC----CEEEEEcCCEEEEEEeccccccccCCCCCCCCCeEEEEEE
Confidence            346789999999999999999999999999887652    3444444566777776432100000000113567899999


Q ss_pred             e---CCHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEecCCCCcCcCCCcchhhcc
Q 029385           89 C---ENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVVPLAGDAVRIRS  153 (194)
Q Consensus        89 v---~dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~~~p~~p~~~~~~~~~~  153 (194)
                      |   +|+++++++|++.|+++..++.... ++.+.+||+|||||.|||++.   |.|+..++|.+.|.
T Consensus        77 v~~~~dv~~~~~~l~~~G~~~~~~~~~~~-~g~~~~~~~DPdG~~iel~~~---~~~~~~~~g~~~~~  140 (150)
T 3bqx_A           77 VRAETEVAPLMERLVAAGGQLLRPADAPP-HGGLRGYVADPDGHIWEIAFN---PVWPIGADGSVTFA  140 (150)
T ss_dssp             CSSGGGHHHHHHHHHHTTCEEEEEEECCT-TSSEEEEEECTTCCEEEEEEC---TTSCEETTEEECCC
T ss_pred             eCCHHHHHHHHHHHHHCCCEEecCCcccC-CCCEEEEEECCCCCEEEEEeC---CCceECCCCcEeee
Confidence            9   7999999999999999887654332 234899999999999999986   56777777777653

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str}

Probab=99.84  E-value=6.2e-20  Score=131.67  Aligned_cols=117  Identities=19%  Similarity=0.346  Sum_probs=91.5

Q ss_pred             cccceeeeEEEEc--CCHHHHHHHHHHccCCeEeeeCCCC-CcceEEEEeCCcEEEEeecCCCCCCCCCCCCCCCCccEE
Q 029385            9 LCLKSLNHISLVC--RSVEASLDFYQNVLGFFPIRRPGSF-DFDGAWLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHI   85 (194)
Q Consensus         9 ~~i~~i~hv~l~v--~Dle~s~~FY~~vLG~~~~~~~~~~-~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~~hi   85 (194)
                      |++++|+||.|.|  +|++++.+||+++|||++..+.... .....|+...+..+++.....         ....+..|+
T Consensus         6 m~~~~i~hv~l~v~~~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~---------~~~~~~~~~   76 (126)
T 2qqz_A            6 NYIQGIDHVQVAAPVGCEEEARAFYGETIGMEEIPKPEELKKRGGCWFKCGNQEIHIGVEQN---------FNPAKRAHP   76 (126)
T ss_dssp             CCEEEEEEEEEEECTTTHHHHHHHHTTTTCCEEECCCGGGGGGCCEEEEETTEEEEEEECTT---------CCCCSSSCE
T ss_pred             cccceeeeEEEEcccccHHHHHHHHHhcCCCEEecCcccccCCCceEEEeCCEEEEEEecCC---------CCCCCceEE
Confidence            6789999999999  8999999999999999998764321 113466655666677665321         112467899


Q ss_pred             EEeeCCHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEecC
Q 029385           86 SFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD  137 (194)
Q Consensus        86 af~v~dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~  137 (194)
                      +|.|+|+++++++|+++|+++...+ ...  +.+.+||+|||||.|||++..
T Consensus        77 ~f~v~d~~~~~~~l~~~G~~~~~~~-~~~--g~~~~~~~DPdG~~iel~~~~  125 (126)
T 2qqz_A           77 AFYVLKIDEFKQELIKQGIEVIDDH-ARP--DVIRFYVSDPFGNRIEFMENK  125 (126)
T ss_dssp             EEEETTHHHHHHHHHHTTCCCEEEC-SST--TEEEEEEECTTSCEEEEEEEC
T ss_pred             EEEcCCHHHHHHHHHHcCCCccCCC-CCC--CeeEEEEECCCCCEEEEEeCC
Confidence            9999999999999999999988765 223  348999999999999999853

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium}

Probab=99.84  E-value=5.4e-20  Score=135.29  Aligned_cols=117  Identities=21%  Similarity=0.334  Sum_probs=86.0

Q ss_pred             CCCCcccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeC--CcEEEEeecCCCCCCCCCCCCCCCCc
Q 029385            5 VENPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNY--GMGIHLLKSEEPDNLPKAGKNINPKD   82 (194)
Q Consensus         5 ~~~~~~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~--g~~~~l~~~~~~~~~~~~~~~~~~g~   82 (194)
                      .+.||++++|+||.|.|+|++++++||+++|||++..+....  ...++...  +..+.+....           ...+.
T Consensus        20 ~~~~m~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~--~~~~~~~~~~~~~l~l~~~~-----------~~~~~   86 (141)
T 3ghj_A           20 QGVPMNIKGLFEVAVKVKNLEKSSQFYTEILGFEAGLLDSAR--RWNFLWVSGRAGMVVLQEEK-----------ENWQQ   86 (141)
T ss_dssp             ------CCCCCEEEEEESCHHHHHHHHHHTSCCEEEEEETTT--TEEEEEETTTTEEEEEEECC-----------SSCCC
T ss_pred             ccCceeeceecEEEEEeCCHHHHHHHHHHhcCCEEEEecCCC--cEEEEEecCCCcEEEEeccC-----------CCCCC
Confidence            345788999999999999999999999999999998875311  23444333  3456666542           12356


Q ss_pred             cEEEEeeC--CHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEe
Q 029385           83 NHISFQCE--NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICN  135 (194)
Q Consensus        83 ~hiaf~v~--dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~  135 (194)
                      .|++|.|+  |+++++++|++.|+++..+. .....+.+.+||+|||||.|||++
T Consensus        87 ~h~~~~v~~~dld~~~~~l~~~G~~~~~~~-~~~~~~~~~~~~~DPdG~~iel~~  140 (141)
T 3ghj_A           87 QHFSFRVEKSEIEPLKKALESKGVSVHGPV-NQEWMQAVSLYFADPNGHALEFTA  140 (141)
T ss_dssp             CEEEEEECGGGHHHHHHHHHHTTCCCEEEE-EEGGGTEEEEEEECTTCCEEEEEE
T ss_pred             ceEEEEEeHHHHHHHHHHHHHCCCeEeCCc-ccCCCCceEEEEECCCCCEEEEEE
Confidence            79999998  99999999999999988433 322223589999999999999985

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens}

Probab=99.83  E-value=3.2e-20  Score=139.35  Aligned_cols=132  Identities=12%  Similarity=0.172  Sum_probs=96.4

Q ss_pred             CcccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeCCcEEEEeecCCCCC-C--CCCCCCCCCCccE
Q 029385            8 PLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDN-L--PKAGKNINPKDNH   84 (194)
Q Consensus         8 ~~~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~-~--~~~~~~~~~g~~h   84 (194)
                      +|.+++|+||.|.|+|++++++||+++|||++..+...   ...++...+..+.++....... .  .........+..|
T Consensus         3 m~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~---~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~h   79 (160)
T 3r4q_A            3 MKPPSAIMETALYADDLDAAEAFYRDVFGLEMVLKLPG---QLVFFKCGRQMLLLFDPQESSRADANNPIPRHGAVGQGH   79 (160)
T ss_dssp             -CCCSCEEEEEEECSCHHHHHHHHHHHSCCEEEEEETT---TEEEEEETTEEEEEECHHHHTCCCTTCCSCCCEEEEECE
T ss_pred             ccccccccEEEEEeCCHHHHHHHHHHhcCCEEEEecCC---cEEEEeCCCEEEEEEecCCccCccccCCCCcCCCcceeE
Confidence            46789999999999999999999999999999887541   3445444555555554332211 0  0111122346699


Q ss_pred             EEEee---CCHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEecCCCCcCcCCCc
Q 029385           85 ISFQC---ENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVVPLAGD  147 (194)
Q Consensus        85 iaf~v---~dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~~~p~~p~~~~  147 (194)
                      ++|.|   +|+++++++|++.|+++..++....  +.+.+||+|||||.|||++.   |.|++.++
T Consensus        80 i~f~V~~~~dld~~~~~l~~~G~~~~~~~~~~~--g~~~~~~~DPdG~~iel~~~---~~~~~d~~  140 (160)
T 3r4q_A           80 FCFYADDKAEVDEWKTRFEALEIPVEHYHRWPN--GSYSVYIRDPAGNSVEVGEG---KLWGFEAE  140 (160)
T ss_dssp             EEEEESSHHHHHHHHHHHHTTTCCCCEEEECTT--SCEEEEEECTTCCEEEEEEG---GGGTCCCC
T ss_pred             EEEEeCCHHHHHHHHHHHHHCCCEEeccccccC--CcEEEEEECCCCCEEEEEeC---CCCCcccc
Confidence            99999   7999999999999999875442222  34899999999999999986   77777654

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} SCOP: d.32.1.0

Probab=99.83  E-value=3.3e-20  Score=133.00  Aligned_cols=125  Identities=22%  Similarity=0.283  Sum_probs=90.7

Q ss_pred             cceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCC--CcceEEEEeCCcEEEEeecCCCCCCCCC--CCCCCCCccEEE
Q 029385           11 LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSF--DFDGAWLFNYGMGIHLLKSEEPDNLPKA--GKNINPKDNHIS   86 (194)
Q Consensus        11 i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~--~~~~~~~~~~g~~~~l~~~~~~~~~~~~--~~~~~~g~~hia   86 (194)
                      +++|+|+.|.|+|++++.+||+++|||++..+....  .....++...+..++++...........  ......+..|++
T Consensus         3 ~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~~hi~   82 (134)
T 3rmu_A            3 LGRLNHVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVNLGNTKMELLHPLGLDSPIAGFLQKNKAGGMHHIC   82 (134)
T ss_dssp             EEEEEEEEEECSCHHHHHHHHHHTSCCEECCCEEEGGGTEEEEEEECSSSEEEEEEECSTTCTTHHHHHHCTTCEEEEEE
T ss_pred             cceeeeEEEEeCCHHHHHHHHHHhcCCEEeEeeecCCCCEEEEEEecCCEEEEEEecCCCCchhhhhhhccCCCCceEEE
Confidence            789999999999999999999999999987653211  1123444445667888776543221100  002346789999


Q ss_pred             EeeCCHHHHHHHHHhCCCeEEccceecCccceEEEEE--eCCCCCEEEEEe
Q 029385           87 FQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFF--HDPDGSMIEICN  135 (194)
Q Consensus        87 f~v~dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~--~DPDG~~iEi~~  135 (194)
                      |.|+|+++++++|+++|+++..++......+.+.+|+  +|||||.|||++
T Consensus        83 ~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~e  133 (134)
T 3rmu_A           83 IEVDNINAAVMDLKKKKIRSLSEEVKIGAHGKPVIFLHPKDCGGVLVELEQ  133 (134)
T ss_dssp             EEESCHHHHHHHHHHTTCTTBCCCCEECTTSSEEEEECSCSSCCSCEEEEE
T ss_pred             EEcCCHHHHHHHHHHcCCcccCCCcccCCCCceEEEEecCCCCcEEEEEEc
Confidence            9999999999999999999876543333223356666  899999999986

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A*

Probab=99.83  E-value=3.2e-19  Score=129.26  Aligned_cols=115  Identities=17%  Similarity=0.167  Sum_probs=89.4

Q ss_pred             ccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEE-eCCcEEEEeecCCCCCCCCCCCCCCCCccEEEEe
Q 029385           10 CLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLF-NYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQ   88 (194)
Q Consensus        10 ~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~-~~g~~~~l~~~~~~~~~~~~~~~~~~g~~hiaf~   88 (194)
                      .+.+++||.|.|+|++++++||+++|||++..+.+    ...++. ..+..+.++....+.  +    ...++..|++|.
T Consensus        10 ~~~~i~~v~l~v~D~~~s~~FY~~~lG~~~~~~~~----~~~~~~~~~~~~l~l~~~~~~~--~----~~~~~~~~~~~~   79 (132)
T 3sk2_A           10 PTITPNLQLVYVSNVERSTDFYRFIFKKEPVFVTP----RYVAFPSSGDALFAIWSGGEEP--V----AEIPRFSEIGIM   79 (132)
T ss_dssp             CCCCCCEEEEECSCHHHHHHHHHHHHTCCCSEECS----SEEEEECSTTCEEEEESSSCCC--C----TTSCCCEEEEEE
T ss_pred             CcceeeEEEEEECCHHHHHHHHHHHcCCeEEEcCC----CEEEEEcCCCcEEEEEeCCCCC--c----CCCCCcceEEEE
Confidence            35789999999999999999999999999887753    233332 234667777654111  1    234577899999


Q ss_pred             eCC---HHHHHHHHHh---CCCeEEccceecCccceEEEEEeCCCCCEEEEEec
Q 029385           89 CEN---MAIVERRLKE---MKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC  136 (194)
Q Consensus        89 v~d---l~~~~~~l~~---~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~  136 (194)
                      |+|   +++++++|++   .|+++..++.... ++ +.+||+|||||.|||++.
T Consensus        80 v~~~~dv~~~~~~l~~~~~~G~~~~~~p~~~~-~g-~~~~~~DPdGn~iel~~~  131 (132)
T 3sk2_A           80 LPTGEDVDKLFNEWTKQKSHQIIVIKEPYTDV-FG-RTFLISDPDGHIIRVCPL  131 (132)
T ss_dssp             ESSHHHHHHHHHHHHHCSSSCCEEEEEEEEET-TE-EEEEEECTTCCEEEEEEC
T ss_pred             eCCHHHHHHHHHHHHhhhcCCCEEeeCCcccC-ce-EEEEEECCCCCEEEEEeC
Confidence            986   9999999999   9999987665443 34 899999999999999974

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}

Probab=99.83  E-value=2e-19  Score=128.37  Aligned_cols=119  Identities=17%  Similarity=0.217  Sum_probs=89.3

Q ss_pred             ceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCC--CCcceEEEEe-CCcEEEEeecCCCCCCCCCCCCCCCCccEEEEe
Q 029385           12 KSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGS--FDFDGAWLFN-YGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQ   88 (194)
Q Consensus        12 ~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~--~~~~~~~~~~-~g~~~~l~~~~~~~~~~~~~~~~~~g~~hiaf~   88 (194)
                      ++|+||.|.|+|++++++||+++|||++..+...  ..+...|+.. .+..++++........+.   ....+..|++|.
T Consensus         2 m~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~---~~~~g~~hi~~~   78 (127)
T 3e5d_A            2 MKIEHVALWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSFEDGARLEIMSRTDVTGKTT---GENLGWAHIAIS   78 (127)
T ss_dssp             CCCCEEEEECSSHHHHHHHHHHHHCCEECCCEEEGGGTEEEEEEECSSSCEEEEEEETTCCCCCC---SSCSSCCCEEEE
T ss_pred             CEEEEEEEEECCHHHHHHHHHHhcCCeeecccccCCCCccEEEEEcCCCcEEEEEecCCCCCCCC---cCCCceEEEEEE
Confidence            4688999999999999999999999998876321  1112233322 356788877654332221   245678999999


Q ss_pred             eCC---HHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEE
Q 029385           89 CEN---MAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEIC  134 (194)
Q Consensus        89 v~d---l~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~  134 (194)
                      |+|   +++++++|++.|+++..++... +++.+.+||+|||||.|||+
T Consensus        79 v~d~~~v~~~~~~l~~~G~~~~~~~~~~-~~g~~~~~~~DPdG~~iel~  126 (127)
T 3e5d_A           79 TGTKEAVDELTEKLRQDGFAIAGEPRMT-GDGYYESVVLDPEGNRIEIT  126 (127)
T ss_dssp             CSSHHHHHHHHHHHHHTTCCEEEEEEEC-TTSCEEEEEECTTSCEEEEE
T ss_pred             cCCHHHHHHHHHHHHHcCCeEecCcccC-CCCcEEEEEECCCCCEEEEe
Confidence            998   8899999999999998765432 33458899999999999997

>4hc5_A Glyoxalase/bleomycin resistance protein/dioxygena; MCSG, GEBA genomes, structural genomics, midwest center for structural genomics; HET: MSE GOL; 1.45A {Sphaerobacter thermophilus}

Probab=99.83  E-value=2.1e-19  Score=129.11  Aligned_cols=121  Identities=17%  Similarity=0.210  Sum_probs=90.0

Q ss_pred             CcccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEE-Ee---CCcEEEEeecCCCCCCCCCCCCCCCCcc
Q 029385            8 PLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWL-FN---YGMGIHLLKSEEPDNLPKAGKNINPKDN   83 (194)
Q Consensus         8 ~~~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~-~~---~g~~~~l~~~~~~~~~~~~~~~~~~g~~   83 (194)
                      ++++++|+||.|.|+|++++++||+++|||++..+....+ ...|+ +.   .+..+++........ .    ....+..
T Consensus         8 ~~m~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~-~~~~~~~~~~~~~~~l~l~~~~~~~~-~----~~~~~~~   81 (133)
T 4hc5_A            8 SLMIAYVHSATIIVSDQEKALDFYVNTLGFEKVFDNQLDP-NMRFVTVVPPGAQTQVALGLPSWYED-G----RKPGGYT   81 (133)
T ss_dssp             CCSCCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEET-TEEEEEEECTTCSCEEEEECGGGCSS-C----CCSCEEE
T ss_pred             cccccceeEEEEEECCHHHHHHHHHhCcCCcEeeecccCC-CceEEEEECCCCceEEEEecCccccc-c----cCCCCeE
Confidence            3568899999999999999999999999999988642111 22333 22   234566665432111 0    2234678


Q ss_pred             EEEEeeCCHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEe
Q 029385           84 HISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICN  135 (194)
Q Consensus        84 hiaf~v~dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~  135 (194)
                      |++|.|+|+++++++|++.|+++..++.... ++.+.+||+|||||.|||++
T Consensus        82 ~~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~-~g~~~~~~~DP~G~~~el~e  132 (133)
T 4hc5_A           82 GISLITRDIDEAYKTLTERGVTFTKPPEMMP-WGQRATWFSDPDGNQFFLVE  132 (133)
T ss_dssp             EEEEEESCHHHHHHHHHHTTCEESSSCEECT-TSCEEEEEECTTCEEEEEEE
T ss_pred             EEEEEeCCHHHHHHHHHHCCCEeecCCCcCC-CCCEEEEEECCCCCEEEEEe
Confidence            9999999999999999999999987664433 34489999999999999987

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP}

Probab=99.82  E-value=6.9e-20  Score=133.23  Aligned_cols=124  Identities=21%  Similarity=0.296  Sum_probs=90.0

Q ss_pred             cccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceE-EEEeCCcEEEEeecCCCCCCCCCCCCCCCCccEEEE
Q 029385            9 LCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGA-WLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISF   87 (194)
Q Consensus         9 ~~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~-~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~~hiaf   87 (194)
                      |++++|+|+.|.|+|++++++||+++|||++..+....+.... +.+..+..+.|.........+ .. ....+..|++|
T Consensus         1 M~i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~-~~-~~~~g~~h~~f   78 (136)
T 2rk0_A            1 MSLSGVSHVSLTVRDLDISCRWYTEILDWKELVRGRGDTTSFAHGVLPGGLSIVLREHDGGGTDL-FD-ETRPGLDHLSF   78 (136)
T ss_dssp             -CEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEECSSEEEEEEECTTSCEEEEEEETTCSSSC-CC-TTSSEEEEEEE
T ss_pred             CCCCcccEEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCceEEEEEcCCCEEEEEeCCCCcccC-CC-CCCCCcceEEE
Confidence            5688999999999999999999999999998876532110011 112345567777664332111 11 33457789999


Q ss_pred             ee---CCHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEecC
Q 029385           88 QC---ENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD  137 (194)
Q Consensus        88 ~v---~dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~  137 (194)
                      .|   +|+++++++|++.|+++.... . ..++ +.+||+|||||.|||++..
T Consensus        79 ~v~~~~d~~~~~~~l~~~G~~~~~~~-~-~~~g-~~~~~~DPdG~~iel~~~~  128 (136)
T 2rk0_A           79 SVESMTDLDVLEERLAKAGAAFTPTQ-E-LPFG-WILAFRDADNIALEAMLGR  128 (136)
T ss_dssp             EESSHHHHHHHHHHHHHHTCCBCCCE-E-ETTE-EEEEEECTTCCEEEEEEEC
T ss_pred             EeCCHHHHHHHHHHHHHCCCcccCcc-c-cCCc-eEEEEECCCCCEEEEEEcC
Confidence            99   799999999999999976432 2 2234 8999999999999999864

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans}

Probab=99.82  E-value=3.6e-20  Score=139.08  Aligned_cols=130  Identities=17%  Similarity=0.190  Sum_probs=92.9

Q ss_pred             cccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCC--CcceEEEEeCCcEEEEeecCCCCCCCCC-CCCCCCCccEE
Q 029385            9 LCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSF--DFDGAWLFNYGMGIHLLKSEEPDNLPKA-GKNINPKDNHI   85 (194)
Q Consensus         9 ~~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~--~~~~~~~~~~g~~~~l~~~~~~~~~~~~-~~~~~~g~~hi   85 (194)
                      +++++|+||+|.|+|++++++||+++|||++..+....  .....++...+..++|++...+...... ......|..|+
T Consensus         4 ~~~~~i~Hv~l~V~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g~~~l~l~~~~~~~~~~~~~~~~~~~g~~Hi   83 (161)
T 3oa4_A            4 EKSNKLDHIGIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQGVKIAFLEIGESKIELLEPLSEESPIAKFIQKRGEGIHHI   83 (161)
T ss_dssp             -CCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEEGGGTEEEEEEEETTEEEEEEEESSTTSHHHHHHHHHCSEEEEE
T ss_pred             cccCcCCEEEEEECCHHHHHHHHHHccCCeEeeeeccCCCCeEEEEEeCCCeEEEEEeECCCCChHHHHhhcCCCCeEEE
Confidence            35789999999999999999999999999988764211  1123444455677888876543211000 00124678999


Q ss_pred             EEeeCCHHHHHHHHHhCCCeEEccceecCccceEEEEE--eCCCCCEEEEEecCC
Q 029385           86 SFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFF--HDPDGSMIEICNCDV  138 (194)
Q Consensus        86 af~v~dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~--~DPDG~~iEi~~~~~  138 (194)
                      +|.|+|+++++++|+++|+++..........+.+.+|+  .|||||+|||++...
T Consensus        84 af~V~Did~~~~~l~~~G~~~~~~~~~~~~~g~~~~f~~~~DPdG~~iEl~~~~~  138 (161)
T 3oa4_A           84 AIGVKSIEERIQEVKENGVQMINDEPVPGARGAQVAFLHPRSARGVLYEFCEKKE  138 (161)
T ss_dssp             EEECSCHHHHHHHHHHTTCCBSCSSCEECGGGCEEEEBCGGGTTTCCEEEEECCC
T ss_pred             EEEECCHHHHHHHHHHCCCEecccCcccCCCCcEEEEEeccCCCeEEEEEEecCC
Confidence            99999999999999999999877622222233466666  399999999998643

>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp}

Probab=99.82  E-value=1e-18  Score=126.54  Aligned_cols=120  Identities=18%  Similarity=0.216  Sum_probs=88.3

Q ss_pred             cccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeCCcEEEEeecCCCCCCCCCCCCCCCCccEEEEe
Q 029385            9 LCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQ   88 (194)
Q Consensus         9 ~~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~~hiaf~   88 (194)
                      ...++|+||.|.|+|++++++||+++|||++..+.+    ....+...+..+.+....... .+     ...+..|++|.
T Consensus         5 ~~~~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~----~~~~~~~~g~~~~l~~~~~~~-~~-----~~~~~~h~~~~   74 (135)
T 3rri_A            5 RNPNDVFHLAIPARDLDEAYDFYVTKLGCKLARRYP----DRITLDFFGDQLVCHLSDRWD-RE-----VSMYPRHFGIT   74 (135)
T ss_dssp             CCTTSEEEEEEEESCHHHHHHHHTTTTCCEEEEEET----TEEEEEETTEEEEEEECSCSC-SS-----CCSSSCEEEEE
T ss_pred             cCCCccceEEEEcCCHHHHHHHHHHhcCCEeeccCC----CcEEEEEeCCEEEEEEcCccc-cc-----CCCCCCeEEEE
Confidence            346789999999999999999999999999977653    223332245555555443221 11     23456799999


Q ss_pred             eC---CHHHHHHHHHhCCCeEEccceec--C-ccceEEEEEeCCCCCEEEEEecCC
Q 029385           89 CE---NMAIVERRLKEMKIDYVKSRVEE--G-GINVDQLFFHDPDGSMIEICNCDV  138 (194)
Q Consensus        89 v~---dl~~~~~~l~~~Gi~~~~~~~~~--~-g~~~~~~~~~DPDG~~iEi~~~~~  138 (194)
                      ++   |+++++++|++.|+++..++...  + ..+.+.+||+|||||.|||++..+
T Consensus        75 ~~~~~d~~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~~~~DPdGn~iel~~~~~  130 (135)
T 3rri_A           75 FRDKKHFDNLYKLAKQRGIPFYHDLSRRFEGLIEEHETFFLIDPSNNLLEFKYYFD  130 (135)
T ss_dssp             CSSHHHHHHHHHHHHHTTCCEEEEEEEESTTSTTCEEEEEEECTTCCEEEEEEESS
T ss_pred             EcChHhHHHHHHHHHHcCCceecCcccccCCCCCceEEEEEECCCCCEEEEEEECC
Confidence            86   59999999999999987766442  1 223488999999999999998754

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A

Probab=99.82  E-value=1.1e-18  Score=125.78  Aligned_cols=121  Identities=22%  Similarity=0.267  Sum_probs=87.2

Q ss_pred             ceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCC--cceEEEEeC----CcEEEEeecCCCCCCCCCCCCCCCCccEE
Q 029385           12 KSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFD--FDGAWLFNY----GMGIHLLKSEEPDNLPKAGKNINPKDNHI   85 (194)
Q Consensus        12 ~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~--~~~~~~~~~----g~~~~l~~~~~~~~~~~~~~~~~~g~~hi   85 (194)
                      ++|+|+.|.|+|++++.+||+++|||++..+....+  +...++...    +..+++.........     ....+..|+
T Consensus         1 m~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~-----~~~~~~~~~   75 (135)
T 1f9z_A            1 MRLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKY-----ELGTAYGHI   75 (135)
T ss_dssp             CCEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESSCTTTSCEEEEEEETTCCCC-----CCCSSEEEE
T ss_pred             CcceEEEEEeCCHHHHHHHHHhccCcEEEEecccCCCceEEEEEecCCCCCCcEEEEEEcCCCCcc-----cCCCCccEE
Confidence            468999999999999999999999999887643111  112333222    245777654322111     223477899


Q ss_pred             EEeeCCHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEecC
Q 029385           86 SFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD  137 (194)
Q Consensus        86 af~v~dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~  137 (194)
                      +|.|+|+++++++|+++|+++..++........+.+||+|||||.|||++..
T Consensus        76 ~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~~~  127 (135)
T 1f9z_A           76 ALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEK  127 (135)
T ss_dssp             EEECSCHHHHHHHHHHTTCEEEEEEEECTTSCCEEEEEECTTSCEEEEEEC-
T ss_pred             EEEeCCHHHHHHHHHHCCCEEecCCccCCCCceeEEEEECCCCCEEEEEecC
Confidence            9999999999999999999988765443321226789999999999999854

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1

Probab=99.81  E-value=4e-19  Score=130.50  Aligned_cols=119  Identities=17%  Similarity=0.222  Sum_probs=86.8

Q ss_pred             CCcccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCC--CcceEEEEeC----CcEEEEeecCCCCCCCCCCCCCCC
Q 029385            7 NPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSF--DFDGAWLFNY----GMGIHLLKSEEPDNLPKAGKNINP   80 (194)
Q Consensus         7 ~~~~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~--~~~~~~~~~~----g~~~~l~~~~~~~~~~~~~~~~~~   80 (194)
                      .+|.+++|+|+.|.|+|++++.+||+++|||++..+....  .+...++...    +..++|+........     ....
T Consensus         2 ~~m~~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~-----~~~~   76 (144)
T 2c21_A            2 SHMPSRRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGVTSY-----KHDE   76 (144)
T ss_dssp             ----CCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTTTSCEEEEEEETTCCCC-----CCCS
T ss_pred             CCCccceeEEEEEEeCCHHHHHHHHHhcCCCEEEEeeecCCCCeEEEEEEcCCCCCceEEEEEecCCCCCC-----CCCC
Confidence            4578999999999999999999999999999998764211  1112444322    256777765432211     2345


Q ss_pred             CccEEEEeeCCHHHHHHHHHhCCCeEEccceecCccceEEE-EEeCCCCCEEEEEec
Q 029385           81 KDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQL-FFHDPDGSMIEICNC  136 (194)
Q Consensus        81 g~~hiaf~v~dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~-~~~DPDG~~iEi~~~  136 (194)
                      +..|++|.|+|+++++++|+++|+++...    .|.  +.+ ||+|||||.|||++.
T Consensus        77 ~~~h~~f~v~d~~~~~~~l~~~G~~~~~~----~g~--~~~~~~~DPdG~~iel~~~  127 (144)
T 2c21_A           77 AYGHIAIGVEDVKELVADMRKHDVPIDYE----DES--GFMAFVVDPDGYYIELLNE  127 (144)
T ss_dssp             SEEEEEEEESCHHHHHHHHHHTTCCEEEE----CSS--SSEEEEECTTSCEEEEEEH
T ss_pred             CceEEEEEeCCHHHHHHHHHHCCCEEecc----CCc--EEEEEEECCCCCEEEEEEc
Confidence            77899999999999999999999998764    232  445 999999999999985

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis}

Probab=99.81  E-value=1.9e-19  Score=134.36  Aligned_cols=128  Identities=17%  Similarity=0.158  Sum_probs=94.1

Q ss_pred             CCCcccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCC----------------CCcceEEEEeCCcEEEEeecCCCC
Q 029385            6 ENPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGS----------------FDFDGAWLFNYGMGIHLLKSEEPD   69 (194)
Q Consensus         6 ~~~~~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~----------------~~~~~~~~~~~g~~~~l~~~~~~~   69 (194)
                      .++..+++|+||+|.|+|++++++||+++|||++..+...                .....+++...+..++|++.....
T Consensus        12 ~~~~~~~~i~Hv~i~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~leL~~~~~~~   91 (159)
T 3gm5_A           12 KNILDMRNTVQIGIVVRDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAKLAFFELGPLQLELIEPDENP   91 (159)
T ss_dssp             SSCCCGGGCEEEEEECSCHHHHHHHHHHHTTCCCCCCEECCCHHHHCCEETTEECCCCEEEEEEEETTEEEEEEEECSSS
T ss_pred             ccccccccccEEEEEeCCHHHHHHHHHHhhCCCCceEEecCCcccccceeecccccceEEEEEEecCCEEEEEEEECCCC
Confidence            4557899999999999999999999999999987654211                111224444456778888764322


Q ss_pred             CCCCCC-CCCCCCccEEEEeeCCHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCC--CCEEEEEec
Q 029385           70 NLPKAG-KNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPD--GSMIEICNC  136 (194)
Q Consensus        70 ~~~~~~-~~~~~g~~hiaf~v~dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPD--G~~iEi~~~  136 (194)
                      ...... .....|..|+||.|+|+++++++|+++|+++...+. ..+  .+.+||.|||  |++|||++.
T Consensus        92 ~~~~~~l~~~~~g~~Hiaf~v~di~~~~~~l~~~G~~~~~~~~-~~g--~~~~~~~dpd~~G~~iEl~e~  158 (159)
T 3gm5_A           92 STWREFLDKNGEGIHHIAFVVKDMDRKVEELYRKGMKVIQKGD-FEG--GRYAYIDTLRALKVMIELLEN  158 (159)
T ss_dssp             CHHHHHHHHHCSEEEEEEEECSCHHHHHHHHHHTTCCEEEEEE-ETT--EEEEEESCHHHHSSEEEEEEE
T ss_pred             ChhHHHhhcCCceEEEEEEEcCCHHHHHHHHHHCCCcEeeccc-cCC--eeEEEEeccccCcEEEEEEec
Confidence            100000 012457899999999999999999999999876642 233  4899999999  999999985

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2

Probab=99.81  E-value=1.1e-18  Score=127.63  Aligned_cols=115  Identities=23%  Similarity=0.364  Sum_probs=90.1

Q ss_pred             cceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeCCcEEEEeecCCCCCCCCCCCCCCCCccEEEEeeC
Q 029385           11 LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQCE   90 (194)
Q Consensus        11 i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~~hiaf~v~   90 (194)
                      +++|+||.|.|+|++++.+||+++|||++..+.+    ...|+...+..+.+......  .+. . ....+..|++|.|+
T Consensus         2 i~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~----~~~~~~~~~~~l~l~~~~~~--~~~-~-~~~~~~~hi~~~v~   73 (141)
T 1npb_A            2 LQSLNHLTLAVSDLQKSVTFWHELLGLTLHARWN----TGAYLTCGDLWVCLSYDEAR--QYV-P-PQESDYTHYAFTVA   73 (141)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHTTSCCEEEEEET----TEEEEEETTEEEEEEECTTC--CCC-C-GGGSCSCEEEEECC
T ss_pred             CceEEEEEEEeCCHHHHHHHHHhccCCEEEeecC----CcEEEEECCEEEEEEECCCC--CCC-C-CCCCCceEEEEEeC
Confidence            6789999999999999999999999999987753    34565555656666654321  111 1 33457789999997


Q ss_pred             --CHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEecC
Q 029385           91 --NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD  137 (194)
Q Consensus        91 --dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~  137 (194)
                        |+++++++|++.|+++...+.  .  +.+.+||+|||||.|||++..
T Consensus        74 ~~d~~~~~~~l~~~G~~~~~~~~--~--~~~~~~~~DPdG~~iel~~~~  118 (141)
T 1npb_A           74 EEDFEPLSQRLEQAGVTIWKQNK--S--EGASFYFLDPDGHKLELHVGS  118 (141)
T ss_dssp             HHHHHHHHHHHHHTTCCEEECCC--S--SSEEEEEECTTCCEEEEEECC
T ss_pred             HHHHHHHHHHHHHCCCeEeccCC--C--ceeEEEEECCCCCEEEEEECc
Confidence              999999999999999887552  2  238999999999999999853

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2

Probab=99.81  E-value=3.4e-19  Score=130.10  Aligned_cols=116  Identities=17%  Similarity=0.332  Sum_probs=86.8

Q ss_pred             cceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcce---EEEEeCCcEEEEeecCCCCCCCCCCCCCCCCccEEEE
Q 029385           11 LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDG---AWLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISF   87 (194)
Q Consensus        11 i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~---~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~~hiaf   87 (194)
                      +++|+|+.|.|+|++++.+||+++|||++..+.+...+..   .++...+..+.+.....   .+      ..+..|++|
T Consensus         2 i~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~g~~~l~l~~~~~---~~------~~~~~h~~~   72 (139)
T 1r9c_A            2 IEGLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGDIWVAIMQGEK---LA------ERSYNHIAF   72 (139)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHHHCCEEEEEGGGSTTCCSCEEEEEETTEEEEEEECCC---CS------SCCSCEEEE
T ss_pred             CceEEEEEEEeCCHHHHHHHHHHhhCCEEeecCCCccccccceEEEEECCEEEEEEeCCC---CC------CCCeeEEEE
Confidence            6789999999999999999999999999987653211111   15545555666665321   11      346789999


Q ss_pred             eeC--CHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEec
Q 029385           88 QCE--NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC  136 (194)
Q Consensus        88 ~v~--dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~  136 (194)
                      .|+  |++++++++++.|+++..++.... ++.+.+||+|||||.|||++.
T Consensus        73 ~v~~~d~~~~~~~l~~~G~~~~~~~~~~~-~~~~~~~~~DPdG~~iel~~~  122 (139)
T 1r9c_A           73 KIDDADFDRYAERVGKLGLDMRPPRPRVE-GEGRSIYFYDDDNHMFELHTG  122 (139)
T ss_dssp             ECCGGGHHHHHHHHHHHTCCBCCCCC------CCEEEEECTTSCEEEEECC
T ss_pred             EcCHHHHHHHHHHHHHCCCcccCCcccCC-CCeEEEEEECCCCCEEEEEeC
Confidence            999  999999999999999886643322 234889999999999999974

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila}

Probab=99.81  E-value=7.5e-19  Score=130.54  Aligned_cols=118  Identities=19%  Similarity=0.271  Sum_probs=86.2

Q ss_pred             ccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEe-CCcEEEEeecCCCCCCCCCCCCCCCCccEEEEe
Q 029385           10 CLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFN-YGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQ   88 (194)
Q Consensus        10 ~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~-~g~~~~l~~~~~~~~~~~~~~~~~~g~~hiaf~   88 (194)
                      ++++|+||.|.|+|++++++||+++|||++..+.+    ...++.. .+..+.++.......   .. ....+..|++|.
T Consensus         3 m~~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~----~~~~~~~~~g~~l~l~~~~~~~~---~~-~~~~~~~~l~f~   74 (148)
T 3rhe_A            3 MLSDPNLVLFYVKNPAKSEEFYKNLLDTQPIESSP----TFAMFVMKTGLRLGLWAQEEIEP---KA-HQTGGGMELSFQ   74 (148)
T ss_dssp             ----CEEEEEEESCHHHHHHHHHHHHTCCCSEECS----SEEEEECTTSCEEEEEEGGGCSS---CC-C----CEEEEEE
T ss_pred             ccccccEEEEEeCCHHHHHHHHHHHcCCEEeccCC----CEEEEEcCCCcEEEEecCCcCCc---cc-cCCCCeEEEEEE
Confidence            46789999999999999999999999999887753    3334332 456677765532211   11 234567899999


Q ss_pred             eCC---HHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEecC
Q 029385           89 CEN---MAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD  137 (194)
Q Consensus        89 v~d---l~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~  137 (194)
                      |+|   +++++++|++.|+++..++.... ++ +.+||+|||||.|||++..
T Consensus        75 v~d~~dvd~~~~~l~~~G~~i~~~p~~~~-~G-~~~~~~DPdG~~iel~~~~  124 (148)
T 3rhe_A           75 VNSNEMVDEIHRQWSDKEISIIQPPTQMD-FG-YTFVGVDPDEHRLRIFCLK  124 (148)
T ss_dssp             CSCHHHHHHHHHHHHHTTCCEEEEEEEET-TE-EEEEEECTTCCEEEEEEEC
T ss_pred             cCCHHHHHHHHHHHHhCCCEEEeCCeecC-CC-cEEEEECCCCCEEEEEEcC
Confidence            987   99999999999999987665443 34 8999999999999999864

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A

Probab=99.81  E-value=7.2e-19  Score=126.90  Aligned_cols=117  Identities=21%  Similarity=0.367  Sum_probs=86.1

Q ss_pred             cceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcc---eEEEEeCCcEEEEeecCCCCCCCCCCCCCCCCccEEEE
Q 029385           11 LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFD---GAWLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISF   87 (194)
Q Consensus        11 i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~---~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~~hiaf   87 (194)
                      +++|+|+.|.|+|++++.+||+++|||++..+.+...+.   ..++...+..+.+.....         ....+..|++|
T Consensus         2 i~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~---------~~~~~~~h~~~   72 (133)
T 2p7o_A            2 ISGLSHITLIVKDLNKTTAFLQNIFNAEEIYSSGDKTFSLSKEKFFLIAGLWICIMEGDS---------LQERTYNHIAF   72 (133)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHHHHCCEECC-----CCCSSCEEEEEETTEEEEEEECSS---------CCCCCSCEEEE
T ss_pred             CceEEEEEEEcCCHHHHHHHHHHhcCCEEeeecCCcccccCCceEEEeCCEEEEEecCCC---------CCCCCeeEEEE
Confidence            678999999999999999999999999988765321110   114444555666664321         11356789999


Q ss_pred             eeC--CHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEecC
Q 029385           88 QCE--NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD  137 (194)
Q Consensus        88 ~v~--dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~  137 (194)
                      .|+  |++++++++++.|+++..++.... .+.+.+||+|||||.|||++..
T Consensus        73 ~v~~~d~~~~~~~l~~~G~~~~~~~~~~~-~~~~~~~~~DPdG~~iel~~~~  123 (133)
T 2p7o_A           73 QIQSEEVDEYTERIKALGVEMKPERPRVQ-GEGRSIYFYDFDNHLFELHAGT  123 (133)
T ss_dssp             ECCGGGHHHHHHHHHHHTCCEECCCCCCT-TCCCEEEEECSSSCEEEEECSS
T ss_pred             EcCHHHHHHHHHHHHHCCCcccCCCccCC-CCeeEEEEECCCCCEEEEEcCC
Confidence            995  999999999999999887654332 2238899999999999999753

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6

Probab=99.81  E-value=9e-19  Score=128.86  Aligned_cols=127  Identities=16%  Similarity=0.212  Sum_probs=90.5

Q ss_pred             cccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCC-------------CCcceEEEEeC-C-cEEEEeecCCCCCCCC
Q 029385            9 LCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGS-------------FDFDGAWLFNY-G-MGIHLLKSEEPDNLPK   73 (194)
Q Consensus         9 ~~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~-------------~~~~~~~~~~~-g-~~~~l~~~~~~~~~~~   73 (194)
                      +.+++|+|+.|.|+|++++++||++ |||++..+...             ......++... + ..++|++...+.....
T Consensus         7 ~~~~~i~hv~l~v~D~~~a~~FY~~-lG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~l~l~~~~~~~~~~~   85 (153)
T 1ss4_A            7 NKLLRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHSRIELSRFLTPPTIAD   85 (153)
T ss_dssp             CCEEEEEEEEEECSCHHHHHHHHHH-HTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTSSCEEEEEEEEESCCCCB
T ss_pred             ccccceeeEEEEeCCHHHHHHHHHH-CCCEEEeeccCCcchhheeeCCCCCcEEEEEEECCCCCcEEEEEEecCCCCccc
Confidence            3688999999999999999999999 99998765310             01112222221 2 5677776532222110


Q ss_pred             --CCCCCCCCccEEEEeeCCHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEecC
Q 029385           74 --AGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD  137 (194)
Q Consensus        74 --~~~~~~~g~~hiaf~v~dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~  137 (194)
                        .......+..|++|.|+|+++++++|++.|+++..++...+ ++.+.+||+|||||.|||++..
T Consensus        86 ~~~~~~~~~g~~hl~~~v~d~~~~~~~l~~~G~~~~~~~~~~~-~g~~~~~~~DPdG~~iel~~~~  150 (153)
T 1ss4_A           86 HRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYE-NSYRLCYIRGVEGILIGLAEEL  150 (153)
T ss_dssp             CTTCCSSSBEEEEEEEEESCHHHHHHHHHHTTCEESSCCEEET-TTEEEEEEECGGGCEEEEEEEC
T ss_pred             ccCCCCCCCceEEEEEEeCCHHHHHHHHHHCCCeecCCCcccC-CceEEEEEECCCCCEEEEEecc
Confidence              01123456779999999999999999999999887664433 3458999999999999999853

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A

Probab=99.80  E-value=1.8e-18  Score=125.59  Aligned_cols=112  Identities=28%  Similarity=0.417  Sum_probs=88.9

Q ss_pred             cceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeCCcEEEEeecCCCCCCCCCCCCCCCCccEEEEeeC
Q 029385           11 LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQCE   90 (194)
Q Consensus        11 i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~~hiaf~v~   90 (194)
                      +++|+||.|.|+|++++.+||+++|||++..+.+    ...|+...+..+.+.....   .   . ....+..|++|.|+
T Consensus         2 i~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~----~~~~~~~~~~~l~l~~~~~---~---~-~~~~~~~h~~~~v~   70 (135)
T 1nki_A            2 LTGLNHLTLAVADLPASIAFYRDLLGFRLEARWD----QGAYLELGSLWLCLSREPQ---Y---G-GPAADYTHYAFGIA   70 (135)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET----TEEEEEETTEEEEEEECTT---C---C-CCCSSSCEEEEEEC
T ss_pred             CceEeEEEEEeCCHHHHHHHHHHhcCCEEEEcCC----CceEEecCCEEEEEEeCCC---C---C-CCCCCcceEEEEcc
Confidence            6889999999999999999999999999987643    3456555565666665421   1   1 33457789999998


Q ss_pred             --CHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEecC
Q 029385           91 --NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD  137 (194)
Q Consensus        91 --dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~  137 (194)
                        |++++++++++.|+++..++.. .   .+.+||+|||||.|||++..
T Consensus        71 ~~d~~~~~~~l~~~G~~~~~~~~~-~---~~~~~~~DPdG~~iel~~~~  115 (135)
T 1nki_A           71 AADFARFAAQLRAHGVREWKQNRS-E---GDSFYFLDPDGHRLEAHVGD  115 (135)
T ss_dssp             HHHHHHHHHHHHHTTCCEEECCCS-S---SCEEEEECTTCCEEEEESCC
T ss_pred             HHHHHHHHHHHHHCCCceecCCCC-C---eEEEEEECCCCCEEEEEECC
Confidence              9999999999999998875532 2   37899999999999999753

>3vw9_A Lactoylglutathione lyase; glyoxalase, lyase-lyase inhibitor complex; HET: EPE HPJ; 1.47A {Homo sapiens} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* 2za0_A*

Probab=99.80  E-value=1.2e-18  Score=133.21  Aligned_cols=127  Identities=22%  Similarity=0.300  Sum_probs=89.5

Q ss_pred             cccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcc-eEEEEeC--------------------CcEEEEeecCC
Q 029385            9 LCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFD-GAWLFNY--------------------GMGIHLLKSEE   67 (194)
Q Consensus         9 ~~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~-~~~~~~~--------------------g~~~~l~~~~~   67 (194)
                      ....+|+||.|.|+|++++++||+++|||++..+....+.. ..+++..                    +..++|+....
T Consensus        30 ~~~~~l~Hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~  109 (187)
T 3vw9_A           30 TKDFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWG  109 (187)
T ss_dssp             GTTCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESCCGGGSCSSHHHHHHHHTTCSSEEEEEEETT
T ss_pred             cceeEEEEEEEEeCCHHHHHHHHHHhcCcEEeeccccCCCceeEEEecCCCcccccccccchhhhcccCCceEEEEEecC
Confidence            35678999999999999999999999999998764321111 1122222                    24677755433


Q ss_pred             CCCCCCC---C-CCCCCCccEEEEeeCCHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEecC
Q 029385           68 PDNLPKA---G-KNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD  137 (194)
Q Consensus        68 ~~~~~~~---~-~~~~~g~~hiaf~v~dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~  137 (194)
                      ....+..   . .....+..|++|.|+|+++++++|+++|+++...+.... ++ +.+||+|||||.|||++..
T Consensus       110 ~~~~~~~~~~~g~~~~~g~~hl~f~v~dv~~~~~~l~~~G~~~~~~~~~~~-~~-~~~~~~DPdG~~iel~~~~  181 (187)
T 3vw9_A          110 TEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGK-MK-GLAFIQDPDGYWIEILNPN  181 (187)
T ss_dssp             GGGCTTCCCCCSSSSSCBEEEEEEECSCHHHHHHHHHHTTCCEEECTTSSS-ST-TCEEEECTTCCEEEEECGG
T ss_pred             CCCCCccccccCCCCCCceeEEEEEECCHHHHHHHHHHCCCeEeeCCccCC-cc-eEEEEECCCCCEEEEEEcc
Confidence            2211111   0 122347889999999999999999999999988664322 22 5689999999999999864

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2

Probab=99.80  E-value=1.9e-18  Score=122.44  Aligned_cols=115  Identities=14%  Similarity=0.140  Sum_probs=83.4

Q ss_pred             cceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeCCcEEEEeecCCCCCCCCCCCCCCCCccEEEEeeC
Q 029385           11 LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQCE   90 (194)
Q Consensus        11 i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~~hiaf~v~   90 (194)
                      +++++|+.|.|+|++++.+||+++|||++....+    ...++...+..+.+...  .. .+.   .......|++|.|+
T Consensus         3 ~m~i~~v~l~v~D~~~a~~FY~~~lG~~~~~~~~----~~~~~~~~~~~l~l~~~--~~-~~~---~~~~~~~~~~~~v~   72 (118)
T 2i7r_A            3 AMNLNQLDIIVSNVPQVCADLEHILDKKADYAND----GFAQFTIGSHCLMLSQN--HL-VPL---ENFQSGIIIHIEVE   72 (118)
T ss_dssp             -CEEEEEEEECSCHHHHHHHHHHHHTSCCSEEET----TEEEEEETTEEEEEESS--CS-SSC---CCCCSCEEEEEECS
T ss_pred             cceeeEEEEEeCCHHHHHHHHHHHhCCeeEEeCC----CEEEEEeCCeEEEEEcC--CC-CCc---ccCCCeEEEEEEEC
Confidence            3578999999999999999999999999876542    23444444444443221  11 111   11123458999999


Q ss_pred             CHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEec
Q 029385           91 NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC  136 (194)
Q Consensus        91 dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~  136 (194)
                      |+++++++|++.|+++..++...+ ++.+.+||+|||||.|||++.
T Consensus        73 d~~~~~~~l~~~G~~~~~~~~~~~-~g~~~~~~~DPdG~~iel~~~  117 (118)
T 2i7r_A           73 DVDQNYKRLNELGIKVLHGPTVTD-WGTESLLVQGPAGLVLDFYRM  117 (118)
T ss_dssp             CHHHHHHHHHHHTCCEEEEEEECT-TSCEEEEEECGGGCEEEEEEC
T ss_pred             CHHHHHHHHHHCCCceecCCcccc-CccEEEEEECCCccEEEEEec
Confidence            999999999999999876664433 345889999999999999874

>2r6u_A Uncharacterized protein; structural genomics, PSI-2, RHA04853, MCSG, protein structur initiative, midwest center for structural genomics; 1.50A {Rhodococcus SP}

Probab=99.79  E-value=9.7e-19  Score=129.83  Aligned_cols=122  Identities=13%  Similarity=0.206  Sum_probs=85.2

Q ss_pred             cceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeCCcEEEEeecCCCCCCCCC-CCCCCCCccEEEEee
Q 029385           11 LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNLPKA-GKNINPKDNHISFQC   89 (194)
Q Consensus        11 i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~-~~~~~~g~~hiaf~v   89 (194)
                      ..+|+|+.|.|+|++++++||+++|||++....+   ....++...+..++|+....+...... ......+ .|++|.|
T Consensus        23 ~~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~g-~~l~f~v   98 (148)
T 2r6u_A           23 TGRIVHFEIPFDDGDRARAFYRDAFGWAIAEIPD---MDYSMVTTGPVGESGMPDEPGYINGGMMQRGEVTT-PVVTVDV   98 (148)
T ss_dssp             CCCEEEEEEEESSHHHHHHHHHHHHCCEEEEETT---TTEEEEECSCBCTTSSBCSSSCBCEEEEESSSSCS-CEEEEEC
T ss_pred             CCceEEEEEEeCCHHHHHHHHHHccCcEEEECCC---CCEEEEEeCCcceeecccCCcccccceeecCCCCe-EEEEEEc
Confidence            3789999999999999999999999999987532   133444333333333222211100000 0011133 4999999


Q ss_pred             CCHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEecC
Q 029385           90 ENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD  137 (194)
Q Consensus        90 ~dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~  137 (194)
                      +|+++++++|++.|+++..++...++++ +.+||+|||||.|||++..
T Consensus        99 ~dld~~~~~l~~~G~~~~~~~~~~~~~g-~~~~~~DPdG~~iel~~~~  145 (148)
T 2r6u_A           99 ESIESALERIESLGGKTVTGRTPVGNMG-FAAYFTDSEGNVVGLWETA  145 (148)
T ss_dssp             SCHHHHHHHHHHTTCEEEEEEEEETTTE-EEEEEECTTSCEEEEEEEC
T ss_pred             CCHHHHHHHHHHcCCeEecCCeecCCCE-EEEEEECCCCCEEEEEecC
Confidence            9999999999999999887665544334 8999999999999999854

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A

Probab=99.79  E-value=5.2e-19  Score=129.46  Aligned_cols=128  Identities=13%  Similarity=0.244  Sum_probs=89.1

Q ss_pred             cccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCC--CcceEEEEeCC------cEEEEeecCCCCCCCC-CCCCCC
Q 029385            9 LCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSF--DFDGAWLFNYG------MGIHLLKSEEPDNLPK-AGKNIN   79 (194)
Q Consensus         9 ~~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~--~~~~~~~~~~g------~~~~l~~~~~~~~~~~-~~~~~~   79 (194)
                      .++++++||.|.|+|++++++||+++|||++..+....  .....++...+      ..++|++...+..... ......
T Consensus         5 ~m~~~~~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~   84 (148)
T 1jc4_A            5 DLFICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLNDESTVAKWLAKHN   84 (148)
T ss_dssp             CCCSEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEESSTTSHHHHHHHHTT
T ss_pred             CccceeeEEEEEeCCHHHHHHHHHHccCceeeecccCCCCCeEEEEEEcCCCCcCcceEEEEeecCCCCChHHHHHHhCC
Confidence            45789999999999999999999999999988764211  11223433333      5678887653321100 000112


Q ss_pred             --CCccEEEEeeCCHHHHHHHHHhCCCeEEc-cceecCccceEEEEE--eCCCCCEEEEEecC
Q 029385           80 --PKDNHISFQCENMAIVERRLKEMKIDYVK-SRVEEGGINVDQLFF--HDPDGSMIEICNCD  137 (194)
Q Consensus        80 --~g~~hiaf~v~dl~~~~~~l~~~Gi~~~~-~~~~~~g~~~~~~~~--~DPDG~~iEi~~~~  137 (194)
                        .+..|++|.|+|+++++++|+++|+++.. .+.. ..++.+.+|+  +|||||.|||++.+
T Consensus        85 ~~~g~~h~~~~v~d~~~~~~~l~~~G~~~~~~~p~~-~~~g~~~~~~~~~DPdG~~iel~~~~  146 (148)
T 1jc4_A           85 GRAGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKL-GTGGNRINFMHPKSGKGVLIELTQYP  146 (148)
T ss_dssp             TCCEEEEEEEECSCHHHHHHHHHHHTCCBSCSSCEE-CSSSCEEEEBCGGGGTTSCEEEEECC
T ss_pred             CCCceEEEEEECCCHHHHHHHHHHCCCeecCcCccc-CCCceEEEEEeecCCCcEEEEEEecC
Confidence              57789999999999999999999999873 3322 2223356666  99999999999854

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2

Probab=99.79  E-value=7.1e-19  Score=124.60  Aligned_cols=113  Identities=17%  Similarity=0.229  Sum_probs=82.9

Q ss_pred             CcccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeCC---cEEEEeecCCCCCCCCCCCCCCCCccE
Q 029385            8 PLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYG---MGIHLLKSEEPDNLPKAGKNINPKDNH   84 (194)
Q Consensus         8 ~~~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~g---~~~~l~~~~~~~~~~~~~~~~~~g~~h   84 (194)
                      .|.++++ |+.|.|+|++++.+||+++|||++..+.+    ...++...+   ..+.+....          ...++..|
T Consensus         3 ~m~i~~i-~v~l~v~d~~~a~~FY~~~lG~~~~~~~~----~~~~~~~~~~~~~~l~l~~~~----------~~~~~~~~   67 (119)
T 2pjs_A            3 HMAVRRV-VANIATPEPARAQAFYGDILGMPVAMDHG----WIVTHASPLEAHAQVSFAREG----------GSGTDVPD   67 (119)
T ss_dssp             --CEEEE-EEEEECSCGGGGHHHHTTTTCCCEEEECS----SEEEEEEEEEEEEEEEEESSS----------BTTBCCCS
T ss_pred             ccceeEE-EEEEEcCCHHHHHHHHHHhcCCEEEecCC----EEEEEecCCCCcEEEEEEcCC----------CCCCceeE
Confidence            3678999 99999999999999999999999887632    122222221   223333211          11234579


Q ss_pred             EEEeeCCHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEec
Q 029385           85 ISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC  136 (194)
Q Consensus        85 iaf~v~dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~  136 (194)
                      ++|.|+|++++++++++.|+++..++...+ ++.+.+||+|||||.|||++.
T Consensus        68 ~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~-~g~~~~~~~DPdG~~iel~~~  118 (119)
T 2pjs_A           68 LSIEVDNFDEVHARILKAGLPIEYGPVTEA-WGVQRLFLRDPFGKLINILSH  118 (119)
T ss_dssp             EEEEESCHHHHHHHHHHTTCCCSEEEEECT-TSCEEEEEECTTSCEEEEEEC
T ss_pred             EEEEECCHHHHHHHHHHCCCccccCCccCC-CccEEEEEECCCCCEEEEEec
Confidence            999999999999999999999876654432 334899999999999999974

>4gym_A Glyoxalase/bleomycin resistance protein/dioxygena; PSI-biology, midwest center for structural genomics, MCSG, oxidoreductase; HET: MSE; 1.56A {Conexibacter woesei}

Probab=99.79  E-value=1e-18  Score=129.12  Aligned_cols=125  Identities=15%  Similarity=0.109  Sum_probs=83.3

Q ss_pred             CcccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeCCcEEEEeecCCCC---CCCCCCCCCCCCccE
Q 029385            8 PLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPD---NLPKAGKNINPKDNH   84 (194)
Q Consensus         8 ~~~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~---~~~~~~~~~~~g~~h   84 (194)
                      |....+|.||+|.|+|+++|++||++ ||+....+.... ....+....+..+.++......   ...... ....+..|
T Consensus         4 m~~~~rl~~V~L~V~Dl~~s~~FY~~-lg~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~   80 (149)
T 4gym_A            4 MASQSRLTFVNLPVADVAASQAFFGT-LGFEFNPKFTDE-SCACMVVSEQAFVMLIDRARFADFTSKPIAD-ATATTEAI   80 (149)
T ss_dssp             ---CCCCEEEEEEESCHHHHHHHHHH-TTCEECGGGCBT-TEEEEEEETTEEEEEEEHHHHGGGCSSCBCC-TTTCBSCE
T ss_pred             CCCCccEEEEEEEeCCHHHHHHHHHH-hCCCcceeecCC-ceeEEeecCcceEeeeccccccccccccCCC-CCCCCeeE
Confidence            34567889999999999999999998 555544443211 1122333444444444321111   111111 33456679


Q ss_pred             EEEeeC---CHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEecC
Q 029385           85 ISFQCE---NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD  137 (194)
Q Consensus        85 iaf~v~---dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~  137 (194)
                      ++|.|+   +++++++++.+.|+.+..++...++  .+.+||+|||||.|||+...
T Consensus        81 ~a~~v~~~~~vd~~~~~~~~~g~~~~~~p~~~~~--~~~~~f~DPDGn~iEi~~~~  134 (149)
T 4gym_A           81 VCVSAIDRDDVDRFADTALGAGGTVARDPMDYGF--MYGRSFHDLDGHLWEVMWMS  134 (149)
T ss_dssp             EEEECSSHHHHHHHHHHHHHTTCEECSCCEECSS--EEEEEEECTTCCEEEEEEEC
T ss_pred             EEEEeccHHHHHHHHHHHHhcCceeeccccccCC--EEEEEEEcCCCCEEEEEEEC
Confidence            999997   6888999999999999988765543  38999999999999999764

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A*

Probab=99.79  E-value=2.3e-18  Score=131.61  Aligned_cols=130  Identities=20%  Similarity=0.243  Sum_probs=91.2

Q ss_pred             cccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcce-EEEEe--------------------CCcEEEEeecCC
Q 029385            9 LCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDG-AWLFN--------------------YGMGIHLLKSEE   67 (194)
Q Consensus         9 ~~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~-~~~~~--------------------~g~~~~l~~~~~   67 (194)
                      +.+++++|+.|.|+|++++++||+++|||++..+....+... .+.+.                    .+..++|+....
T Consensus        27 ~~~~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~L~~~~~  106 (184)
T 2za0_A           27 TKDFLLQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAWTFSRKATLELTHNWG  106 (184)
T ss_dssp             GTTCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESCCGGGSCSSHHHHHHHHTTSSSEEEEEEETT
T ss_pred             ccceeEEEEEEEeCCHHHHHHHHHHhcCCEEEEeccCCCCCceeEEecccccccCCcccchheeeecCCCceEEEEecCC
Confidence            457899999999999999999999999999887542111011 12222                    235677776533


Q ss_pred             CCCCCCC---C-CCCCCCccEEEEeeCCHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEecCCCC
Q 029385           68 PDNLPKA---G-KNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLP  140 (194)
Q Consensus        68 ~~~~~~~---~-~~~~~g~~hiaf~v~dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~~~p  140 (194)
                      ....+..   . .....+..|++|.|+|+++++++|+++|+++...+....+  .+.+||+|||||.|||++....|
T Consensus       107 ~~~~~~~~~~~~~~~~~g~~hi~f~v~dvd~~~~~l~~~G~~~~~~p~~~~~--~~~~~~~DPdG~~iel~~~~~~~  181 (184)
T 2za0_A          107 TEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKM--KGLAFIQDPDGYWIEILNPNKIA  181 (184)
T ss_dssp             GGGCTTCCCCCSSSSSCCEEEEEEECSCHHHHHHHHHHTTCCEEECTTSSSS--TTCEEEECTTCCEEEEECTTTGG
T ss_pred             CCCCcccccccCCCCCCCeeEEEEEeCCHHHHHHHHHHCCCeeecCCcCCCc--eeEEEEECCCCCEEEEEecCccc
Confidence            1111110   0 0122577899999999999999999999998876543222  26789999999999999875543

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei}

Probab=99.79  E-value=1.2e-18  Score=128.96  Aligned_cols=118  Identities=14%  Similarity=0.171  Sum_probs=87.0

Q ss_pred             cccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeCCcEEEEeecCCCCCCCCCCCCCCCCccEEEEe
Q 029385            9 LCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQ   88 (194)
Q Consensus         9 ~~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~~hiaf~   88 (194)
                      |+++++. +.|.|+|++++++||+++|||++..+....+...... ..+ +++++......       ....+..|++|.
T Consensus         3 M~i~~i~-i~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~-~~~-~~~l~~~~~~~-------~~~~~~~hl~f~   72 (144)
T 3r6a_A            3 MKILQIL-SRLYVADLNPALEFYEELLETPVAMRFEIPQTGVELA-QIS-TILLIAGSEEA-------LKPFRNTQATFL   72 (144)
T ss_dssp             CCEEEEE-EEEEESCHHHHHHHHHHHTTCCCCEECCCSCSSCEEE-EET-TEEEEESCHHH-------HGGGGGCCEEEE
T ss_pred             EEEEEEE-EEEEECCHHHHHHHHHHhcCCEEEEEeccCCccEEEE-Eec-cEEEecCCccc-------CCCCcceEEEEE
Confidence            6788987 9999999999999999999999887753211111222 222 25555443111       111245899999


Q ss_pred             eCCHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEecCC
Q 029385           89 CENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV  138 (194)
Q Consensus        89 v~dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~~  138 (194)
                      |+|+++++++|++.|+++..++...+ ++ +.+||+|||||.|||++..+
T Consensus        73 V~d~d~~~~~l~~~G~~v~~~p~~~~-~G-~~~~~~DPdG~~iel~~~~~  120 (144)
T 3r6a_A           73 VDSLDKFKTFLEENGAEIIRGPSKVP-TG-RNMTVRHSDGSVIEYVEHSK  120 (144)
T ss_dssp             ESCHHHHHHHHHHTTCEEEEEEEEET-TE-EEEEEECTTSCEEEEEEECC
T ss_pred             eCCHHHHHHHHHHcCCEEecCCccCC-Cc-eEEEEECCCCCEEEEEEcCC
Confidence            99999999999999999887765443 23 88999999999999999754

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}

Probab=99.78  E-value=5.8e-18  Score=122.59  Aligned_cols=116  Identities=16%  Similarity=0.215  Sum_probs=82.4

Q ss_pred             cceeeeEEEEcCCHHHHHHHHHHccCCeEeee-CCCCCcceEEEE-eCCcEEEEeecCCCCCCCCCCCCCCCCccEEEEe
Q 029385           11 LKSLNHISLVCRSVEASLDFYQNVLGFFPIRR-PGSFDFDGAWLF-NYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQ   88 (194)
Q Consensus        11 i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~-~~~~~~~~~~~~-~~g~~~~l~~~~~~~~~~~~~~~~~~g~~hiaf~   88 (194)
                      ...|+||.|.|+|++++++||++ |||++..+ .+..  ...++. ..+..+.+.....  ..     ....+..|++|.
T Consensus         4 ~~~i~hv~l~v~D~~~a~~FY~~-LG~~~~~~~~~~~--~~~~~~~~~~~~l~l~~~~~--~~-----~~~~~~~~l~f~   73 (128)
T 3g12_A            4 SLLITSITINTSHLQGMLGFYRI-IGFQFTASKVDKG--SEVHRAVHNGVEFSLYSIQN--PQ-----RSQIPSLQLGFQ   73 (128)
T ss_dssp             CEEEEEEEEEESCHHHHHHHHHH-HTCCCEEC-------CCEEEEEETTEEEEEEECCC--CS-----SCCCCSEEEEEE
T ss_pred             cceEEEEEEEcCCHHHHHHHHHH-CCCEEecccCCCC--CEEEEEeCCCeEEEEEECCC--Cc-----CCCCCceEEEEE
Confidence            45799999999999999999999 99998876 3211  223333 4555566643321  11     223455789999


Q ss_pred             eCCHHHHHHHHHhCCCe-EEccceecCccceEEEEEeCCCCCEEEEEecCC
Q 029385           89 CENMAIVERRLKEMKID-YVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV  138 (194)
Q Consensus        89 v~dl~~~~~~l~~~Gi~-~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~~  138 (194)
                      |+|+++++++++++|++ +..++... .++.+ ++|+|||||.|||.+.+.
T Consensus        74 v~dvd~~~~~l~~~G~~~~~~~p~~~-~~G~~-~~~~DPdGn~iel~~~~~  122 (128)
T 3g12_A           74 ITDLEKTVQELVKIPGAMCILDPTDM-PDGKK-AIVLDPDGHSIELCELEG  122 (128)
T ss_dssp             ESCHHHHHHHHTTSTTCEEEEEEEEC-C-CEE-EEEECTTCCEEEEEC---
T ss_pred             eCCHHHHHHHHHHCCCceeccCceeC-CCccE-EEEECCCCCEEEEEEecc
Confidence            99999999999999999 77655443 24445 999999999999998753

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125}

Probab=99.78  E-value=2.8e-18  Score=126.91  Aligned_cols=123  Identities=20%  Similarity=0.249  Sum_probs=91.4

Q ss_pred             CCcccceeeeEEEEcCCHHHHHHHH---HHccCCeEeeeCCCCCcceEEEEeCCcEEEEeecCCCC-CCCCCCCCCCCCc
Q 029385            7 NPLCLKSLNHISLVCRSVEASLDFY---QNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPD-NLPKAGKNINPKD   82 (194)
Q Consensus         7 ~~~~i~~i~hv~l~v~Dle~s~~FY---~~vLG~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~-~~~~~~~~~~~g~   82 (194)
                      +.+.+++++|+.|.|+|++++++||   +++|||++..+...   ...|+. .+..+.|+....+. ..+. . ....+.
T Consensus        14 ~~~~~~~i~hv~l~v~Dl~~a~~FY~~~~~~LG~~~~~~~~~---~~~~~~-g~~~l~l~~~~~~~~~~~~-~-~~~~g~   87 (146)
T 3ct8_A           14 NLYFQGMLHHVEINVDHLEESIAFWDWLLGELGYEDYQSWSR---GKSYKH-GKTYLVFVQTEDRFQTPTF-H-RKRTGL   87 (146)
T ss_dssp             CTTTTTSCCEEEEEESCHHHHHHHHHHHHHHTTCEEEEEETT---EEEEEE-TTEEEEEEECCGGGSCSCC-C-TTSSSC
T ss_pred             ccccccceeEEEEEeCCHHHHHHHHHhhhhhCCCEEEEecCC---CceEec-CCeEEEEEEcCCCcccccc-c-ccCCCc
Confidence            4567889999999999999999999   99999999877531   124544 55667777654210 1111 0 123567


Q ss_pred             cEEEEeeC---CHHHHHHHHHhCCCeEEcc-ceec-CccceEEEEEeCCCCCEEEEEe
Q 029385           83 NHISFQCE---NMAIVERRLKEMKIDYVKS-RVEE-GGINVDQLFFHDPDGSMIEICN  135 (194)
Q Consensus        83 ~hiaf~v~---dl~~~~~~l~~~Gi~~~~~-~~~~-~g~~~~~~~~~DPDG~~iEi~~  135 (194)
                      .|++|.|+   |+++++++|++.|+++..+ +... .+.+.+.+||+|||||.|||++
T Consensus        88 ~hi~f~v~~~~dv~~~~~~l~~~G~~~~~~~p~~~~~g~~~~~~~~~DPdG~~iel~~  145 (146)
T 3ct8_A           88 NHLAFHAASREKVDELTQKLKERGDPILYEDRHPFAGGPNHYAVFCEDPNRIKVEIVA  145 (146)
T ss_dssp             CEEEEECSCHHHHHHHHHHHHHHTCCBCCTTTTTCTTCTTCCEEEEECTTCCEEEEEC
T ss_pred             eEEEEECCCHHHHHHHHHHHHHcCCccccCCCccccCCCceEEEEEECCCCCEEEEEe
Confidence            89999999   9999999999999998763 3222 2334589999999999999985

>1xrk_A Bleomycin resistance protein; arm exchange, ligand binding protein, thermostable mutant, antibiotic inhibitor; HET: BLM; 1.50A {Streptoalloteichus hindustanus} SCOP: d.32.1.2 PDB: 2zhp_A* 1byl_A

Probab=99.78  E-value=1.2e-17  Score=119.70  Aligned_cols=111  Identities=16%  Similarity=0.239  Sum_probs=85.1

Q ss_pred             ccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeCCcEEEEeecCCCCCCCCCCCCCCCCccEEEEee
Q 029385           10 CLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQC   89 (194)
Q Consensus        10 ~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~~hiaf~v   89 (194)
                      +++. .|+.|.|+|++++.+||+++|||++..+.+    ...++...+..+++......         ..++..|++|.|
T Consensus         3 ~~~~-~~~~l~v~D~~~a~~FY~~~lG~~~~~~~~----~~~~~~~~~~~l~l~~~~~~---------~~~~~~~~~~~v   68 (124)
T 1xrk_A            3 KLTS-AVPVLTARDVAEAVEFWTDRLGFSRVFVED----DFAGVVRDDVTLFISAVQDQ---------VVPDNTQAWVWV   68 (124)
T ss_dssp             EEEE-EEEEEEESCHHHHHHHHHHTTCCEEEEECS----SEEEEEETTEEEEEEECSCT---------TTGGGCEEEEEE
T ss_pred             cccc-eeEEEEcCCHHHHHHHHHHccCceEEecCC----CEEEEEECCEEEEEEcCCCC---------CCCCceEEEEEE
Confidence            4444 599999999999999999999999987732    23334445556666654321         123457999999


Q ss_pred             CCHHHHHHHHHhC------CC--eEEccceecCccceEEEEEeCCCCCEEEEEec
Q 029385           90 ENMAIVERRLKEM------KI--DYVKSRVEEGGINVDQLFFHDPDGSMIEICNC  136 (194)
Q Consensus        90 ~dl~~~~~~l~~~------Gi--~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~  136 (194)
                      +|++++++++++.      |+  ++..++...+ ++ +.+||+|||||.|||++.
T Consensus        69 ~dv~~~~~~l~~~~~~~~~G~~~~~~~~~~~~~-~g-~~~~~~DPdG~~iel~~~  121 (124)
T 1xrk_A           69 RGLDELYAEWSEVVSTNFRDASGPAMTEIVEQP-WG-REFALRDPAGNCVHFVAE  121 (124)
T ss_dssp             ECHHHHHHHHTTTSBSCTTTCSSCEECCCEEET-TE-EEEEEECTTCCEEEEEEC
T ss_pred             CCHHHHHHHHHHhcccccCCccccccCCceecC-CC-CEEEEECCCCCEEEEEEe
Confidence            9999999999999      99  7777664443 44 899999999999999975

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str}

Probab=99.78  E-value=1.1e-18  Score=127.25  Aligned_cols=127  Identities=17%  Similarity=0.201  Sum_probs=84.8

Q ss_pred             cccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeCCcEEEE-----eecCCCCCCCCCCCCCCCCcc
Q 029385            9 LCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHL-----LKSEEPDNLPKAGKNINPKDN   83 (194)
Q Consensus         9 ~~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~g~~~~l-----~~~~~~~~~~~~~~~~~~g~~   83 (194)
                      +++++++|+.|.|+|++++.+||+++|||++..+.+    ... .+..+..++.     +... +...+... ....+..
T Consensus         4 ~~~~~l~~v~l~v~D~~~a~~FY~~~LG~~~~~~~~----~~~-~~~~g~~l~~~~~~~~~~~-~~~~~~~~-~~~~~~~   76 (141)
T 2qnt_A            4 FQGMRFVNPIPFVRDINRSKSFYRDRLGLKILEDFG----SFV-LFETGFAIHEGRSLEETIW-RTSSDAQE-AYGRRNM   76 (141)
T ss_dssp             CCSCCCCCCCCEESCHHHHHHHHHHTTCCCEEEECS----SEE-EETTSCEEEEHHHHHHHHH-SCCC--CC-CSCCSSC
T ss_pred             ccccccceEEEEECCHHHHHHHHHHhcCCEEEEEcC----CcE-EEeccceeccCchhhhhcc-ccCCcccc-ccCCCce
Confidence            456788999999999999999999999999987653    222 2333433331     1100 00000001 2235778


Q ss_pred             EEEEeeCCHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEecCCCCcCcC
Q 029385           84 HISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVVPL  144 (194)
Q Consensus        84 hiaf~v~dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~~~p~~p~  144 (194)
                      |++|.|+|+++++++|++ |+++..++.... ++.+.+||+|||||.|||++....+.-++
T Consensus        77 ~~~~~v~dv~~~~~~l~~-G~~~~~~~~~~~-~g~~~~~~~DPdG~~iel~~~~~~~~~~~  135 (141)
T 2qnt_A           77 LLYFEHADVDAAFQDIAP-HVELIHPLERQA-WGQRVFRFYDPDGHAIEVGESLSQSGENL  135 (141)
T ss_dssp             EEEEEESCHHHHHC-CGG-GSCEEEEEEECT-TSCEEEEEECTTCCEEEEEECC-------
T ss_pred             EEEEEeCcHHHHHHHHHc-CCccccCCccCC-CCCEEEEEECCCCCEEEEEecchHHHHHH
Confidence            999999999999999999 999877664433 34589999999999999998654333344

>1qto_A Bleomycin-binding protein; arm-exchange, antibiotic inhibitor; 1.50A {Streptomyces verticillus} SCOP: d.32.1.2 PDB: 1jie_A* 1jif_A

Probab=99.77  E-value=6.3e-18  Score=120.90  Aligned_cols=112  Identities=13%  Similarity=0.139  Sum_probs=85.1

Q ss_pred             cccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeCCcEEEEeecCCCCCCCCCCCCCCCCccEEEEe
Q 029385            9 LCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQ   88 (194)
Q Consensus         9 ~~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~~hiaf~   88 (194)
                      |+++.+ ++.|.|+|++++.+||+++|||++..+.+    ...++...+..+++......   +      .++..|++|.
T Consensus         2 ~~~~~~-~~~l~v~D~~~a~~FY~~~LG~~~~~~~~----~~~~~~~~~~~l~l~~~~~~---~------~~~~~~~~~~   67 (122)
T 1qto_A            2 VKFLGA-VPVLTAVDVPANVSFWVDTLGFEKDFGDR----DFAGVRRGDIRLHISRTEHQ---I------VADNTSAWIE   67 (122)
T ss_dssp             CCCCCC-CCEEEESSHHHHHHHHHHTTCCEEEEECS----SEEEEEETTEEEEEEECSCH---H------HHTTCEEEEE
T ss_pred             Ccccce-eEEEEcCCHHHHHHHHHhccCcEEeeCCC----CEEEEEECCEEEEEEcCCCC---C------CCCceEEEEE
Confidence            445555 89999999999999999999999987632    23444445566776653311   0      1234799999


Q ss_pred             eCCHHHHHHHHHhC------CC--eEEccceecCccceEEEEEeCCCCCEEEEEec
Q 029385           89 CENMAIVERRLKEM------KI--DYVKSRVEEGGINVDQLFFHDPDGSMIEICNC  136 (194)
Q Consensus        89 v~dl~~~~~~l~~~------Gi--~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~  136 (194)
                      |+|++++++++++.      |+  ++..++...+ ++ +.++|+|||||.|||++.
T Consensus        68 v~dvd~~~~~l~~~~~~~~~G~~~~~~~~~~~~~-~g-~~~~~~DPdG~~iel~~~  121 (122)
T 1qto_A           68 VTDPDALHEEWARAVSTDYADTSGPAMTPVGESP-AG-REFAVRDPAGNCVHFTAG  121 (122)
T ss_dssp             ESCHHHHHHHHTTTSCSCTTCTTSCEECCCEEET-TE-EEEEEECTTSCEEEEEEC
T ss_pred             ECCHHHHHHHHHhhccccccCccccccCCCcCCC-CC-cEEEEECCCCCEEEEecC
Confidence            99999999999999      99  7776664433 44 899999999999999974

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens}

Probab=99.77  E-value=8.6e-18  Score=124.06  Aligned_cols=116  Identities=16%  Similarity=0.260  Sum_probs=87.9

Q ss_pred             cceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeC-CcEEEEeecCCCCCCCCCCCCCCCCccEEEEee
Q 029385           11 LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNY-GMGIHLLKSEEPDNLPKAGKNINPKDNHISFQC   89 (194)
Q Consensus        11 i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~-g~~~~l~~~~~~~~~~~~~~~~~~g~~hiaf~v   89 (194)
                      +++++|+.|.|+|++++.+||+++|||++..+.+    ...++... +..+.|+......  +. . ....+..|++|.|
T Consensus        23 m~~l~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~----~~~~~~~~~~~~l~l~~~~~~~--~~-~-~~~~~~~hl~f~v   94 (144)
T 2kjz_A           23 MTHPDFTILYVDNPPASTQFYKALLGVDPVESSP----TFSLFVLANGMKLGLWSRHTVE--PK-A-SVTGGGGELAFRV   94 (144)
T ss_dssp             CCCCCEEEEEESCHHHHHHHHHHHHTCCCSEEET----TEEEEECTTSCEEEEEETTSCS--SC-C-CCSSSSCEEEEEC
T ss_pred             cCceeEEEEEeCCHHHHHHHHHHccCCEeccCCC----CeEEEEcCCCcEEEEEeCCCCC--Cc-c-CCCCCceEEEEEe
Confidence            4589999999999999999999999999887652    23444333 4567776543211  11 1 2235788999999


Q ss_pred             C---CHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEec
Q 029385           90 E---NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC  136 (194)
Q Consensus        90 ~---dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~  136 (194)
                      +   |+++++++|++.|+++..++.... ++ +.+||+|||||.|||++.
T Consensus        95 ~d~~dv~~~~~~l~~~G~~~~~~~~~~~-~g-~~~~~~DPdG~~iel~~~  142 (144)
T 2kjz_A           95 ENDAQVDETFAGWKASGVAMLQQPAKME-FG-YTFTAADPDSHRLRVYAF  142 (144)
T ss_dssp             SSHHHHHHHHHHHHHTTCCCCSCCEEET-TE-EEEEECCTTCCEEEEEEE
T ss_pred             CCHHHHHHHHHHHHHCCCeEecCceecC-Cc-eEEEEECCCCCEEEEEec
Confidence            7   589999999999999887665433 33 889999999999999974

>3fcd_A Lyase, ORF125EGC139; lactoylglutathione lyase, YECM, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.92A {Uncultured bacterium} SCOP: d.32.1.0

Probab=99.77  E-value=1.5e-17  Score=120.99  Aligned_cols=118  Identities=16%  Similarity=0.176  Sum_probs=83.9

Q ss_pred             ccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeCCcEEEEeecCCCCCCCCCCCCCCCCccEEEEee
Q 029385           10 CLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQC   89 (194)
Q Consensus        10 ~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~~hiaf~v   89 (194)
                      .+..+ +..|.|+|++++++||+++|||++..+..    ...++...+..+++.........     ....+..|++|.|
T Consensus         5 ~~~~~-~~~l~v~D~~~a~~FY~~~LG~~~~~~~~----~~~~l~~~~~~l~l~~~~~~~~~-----~~~~~~~~l~~~v   74 (134)
T 3fcd_A            5 DIHQI-TPFLHIPDMQEALTLFCDTLGFELKYRHS----NYAYLELSGCGLRLLEEPARKII-----PDGIARVAICIDV   74 (134)
T ss_dssp             -CCEE-EEEEEESCHHHHHHHHTTTTCCEEEEEET----TEEEEEETTEEEEEEECCCC--------------EEEEEEC
T ss_pred             hhhcc-eeEEEECCHHHHHHHHHhccCcEEEEeCC----CeEEEEECCEEEEEEeCCCCCcC-----CCCCceEEEEEEe
Confidence            34555 78999999999999999999999988753    34555556667777765432111     1123457999999


Q ss_pred             CCHHHHHHHHHhCCC----eEEccceecCccceEEEEEeCCCCCEEEEEecCC
Q 029385           90 ENMAIVERRLKEMKI----DYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV  138 (194)
Q Consensus        90 ~dl~~~~~~l~~~Gi----~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~~  138 (194)
                      +|++++++++++.|+    ++..++.. ..++.+.++|+|||||.|||++...
T Consensus        75 ~dv~~~~~~l~~~g~~~g~~i~~~~~~-~~~g~~~~~~~DPdG~~iel~~~~~  126 (134)
T 3fcd_A           75 SDIDSLHTKLSPALENLPADQVEPLKN-MPYGQREFQVRMPDGDWLNFTAPLA  126 (134)
T ss_dssp             SCHHHHHHHHHHHHTTSCGGGEEEEEE-CTTSEEEEEEECTTSCEEEEEEECC
T ss_pred             CCHHHHHHHHHhcCCccCCccccCCcc-cCCCcEEEEEECCCCCEEEEEEccc
Confidence            999999999996554    44444433 3345589999999999999998754

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp}

Probab=99.77  E-value=8.7e-18  Score=140.77  Aligned_cols=128  Identities=23%  Similarity=0.342  Sum_probs=94.2

Q ss_pred             cccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEE-E-EeC-----CcEEEEeecCCCCCCCCCCCCCCCC
Q 029385            9 LCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAW-L-FNY-----GMGIHLLKSEEPDNLPKAGKNINPK   81 (194)
Q Consensus         9 ~~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~-~-~~~-----g~~~~l~~~~~~~~~~~~~~~~~~g   81 (194)
                      |++++|+||+|.|+|++++.+||+++|||++..+....+..+.+ + +..     +..+.++......  +..  ....+
T Consensus         4 ~~i~~i~Hv~l~v~Dl~~s~~FY~~vLGl~~v~~~~~~~~~~~~~l~~~~~~g~~g~~l~l~~~~~~~--~~~--~~~~~   79 (335)
T 3oaj_A            4 KKTMGIHHITAIVGHPQENTDFYAGVLGLRLVKQTVNFDDPGTYHLYFGNEGGKPGTIITFFPWAGAR--QGV--IGDGQ   79 (335)
T ss_dssp             CCCCSEEEEEEEESCHHHHHHHHTTTTCCEEEEEEECSSCTTSEEEEEESTTCCTTSEEEEEECTTCC--BCB--CCBSE
T ss_pred             ccCCcccEEEEEeCCHHHHHHHHHHhcCCEEEeeecCCCCCceEEEEEecCCCCCCcEEEEEECCCCC--CCC--CCCCc
Confidence            56899999999999999999999999999998875333212222 2 222     3456676553321  111  23456


Q ss_pred             ccEEEEeeC--CHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEecCCCCcCcC
Q 029385           82 DNHISFQCE--NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVVPL  144 (194)
Q Consensus        82 ~~hiaf~v~--dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~~~p~~p~  144 (194)
                      ..|+||.|+  |+++++++|++.|+++..  ....  +.+.+||+|||||.|||++.......||
T Consensus        80 ~~hiaf~V~~~dl~~~~~rL~~~Gv~~~~--~~~~--g~~~~~f~DPdGn~iEl~~~~~~~~~~~  140 (335)
T 3oaj_A           80 VGVTSYVVPKGAMAFWEKRLEKFNVPYTK--IERF--GEQYVEFDDPHGLHLEIVEREEGEANTW  140 (335)
T ss_dssp             EEEEEEEECTTCHHHHHHHHHHTTCCCEE--EEET--TEEEEEEECTTSCEEEEEECSCSCCCCC
T ss_pred             eEEEEEEecHHHHHHHHHHHHhCcceeee--eccC--CcEEEEEECCCCCEEEEEEeCCCCcCCC
Confidence            789999999  999999999999999875  3333  3489999999999999999765444444

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A*

Probab=99.76  E-value=1.1e-17  Score=121.82  Aligned_cols=123  Identities=15%  Similarity=0.121  Sum_probs=87.9

Q ss_pred             cceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEe-CCcEEEEeecCCCCC-CCCCCCCCCCCccEEEEe
Q 029385           11 LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFN-YGMGIHLLKSEEPDN-LPKAGKNINPKDNHISFQ   88 (194)
Q Consensus        11 i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~-~g~~~~l~~~~~~~~-~~~~~~~~~~g~~hiaf~   88 (194)
                      +++|+|+.|.|+|++++++||++ |||++..+....  ....+.. .+..+.+........ .+........+..|++|.
T Consensus         2 ~~~l~hv~l~v~D~~~a~~FY~~-LG~~~~~~~~~~--~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~l~f~   78 (138)
T 2a4x_A            2 SARISLFAVVVEDMAKSLEFYRK-LGVEIPAEADSA--PHTEAVLDGGIRLAWDTVETVRSYDPEWQAPTGGHRFAIAFE   78 (138)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHT-TTCCCCGGGGGC--SEEEEECTTSCEEEEEEHHHHHHHCTTCCCCBSSCSEEEEEE
T ss_pred             cceeeEEEEEECCHHHHHHHHHH-cCCcEEecCCCC--ceEEEEcCCCeEEEEecCccchhhCcccCCCCCCCeEEEEEE
Confidence            46899999999999999999998 999987764311  1222222 445666665321000 000001234577899999


Q ss_pred             eC---CHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEecC
Q 029385           89 CE---NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD  137 (194)
Q Consensus        89 v~---dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~  137 (194)
                      |+   |+++++++|++.|+++..++...+ ++.+.+||+|||||.|||++..
T Consensus        79 v~~~~dv~~~~~~l~~~G~~~~~~~~~~~-~g~~~~~~~DPdG~~iel~~~~  129 (138)
T 2a4x_A           79 FPDTASVDKKYAELVDAGYEGHLKPWNAV-WGQRYAIVKDPDGNVVDLFAPL  129 (138)
T ss_dssp             CSSHHHHHHHHHHHHHTTCCEEEEEEEET-TTEEEEEEECTTCCEEEEEEEC
T ss_pred             eCCHHHHHHHHHHHHHCCCceeeCCcccC-CCcEEEEEECCCCCEEEEEeCC
Confidence            99   999999999999999887654432 3458999999999999999865

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2

Probab=99.76  E-value=5.5e-18  Score=119.05  Aligned_cols=107  Identities=23%  Similarity=0.353  Sum_probs=81.1

Q ss_pred             ceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeC-CcEEEEeecCCCCCCCCCCCCCCCCccEEEEee-
Q 029385           12 KSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNY-GMGIHLLKSEEPDNLPKAGKNINPKDNHISFQC-   89 (194)
Q Consensus        12 ~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~-g~~~~l~~~~~~~~~~~~~~~~~~g~~hiaf~v-   89 (194)
                      ++|+|+.|.|+|++++.+||+++|||++..+.+.   ...++... +..+.+.....   .+      .++..|++|.| 
T Consensus         2 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~---~~~~~~~~~~~~l~l~~~~~---~~------~~~~~~~~~~v~   69 (113)
T 1xqa_A            2 MGIKHLNLTVADVVAAREFLEKYFGLTCSGTRGN---AFAVMRDNDGFILTLMKGKE---VQ------YPKTFHVGFPQE   69 (113)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHHHCCEEEEEETT---TEEEEECTTCCEEEEEECSS---CC------CCTTCCEEEECS
T ss_pred             CeeEEEEEEeCCHHHHHHHHHHhCCCEEeccCCC---cEEEEEcCCCcEEEEEeCCC---CC------CCceeEEEEEcC
Confidence            4689999999999999999999999998876421   23444332 34566654321   11      24678999999 


Q ss_pred             --CCHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEE
Q 029385           90 --ENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEIC  134 (194)
Q Consensus        90 --~dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~  134 (194)
                        +|++++++++++.|+++.. +.. .+  .+.+||+|||||.|||+
T Consensus        70 ~~~d~~~~~~~l~~~G~~~~~-p~~-~~--~~~~~~~DPdG~~iel~  112 (113)
T 1xqa_A           70 SEEQVDKINQRLKEDGFLVEP-PKH-AH--AYTFYVEAPGGFTIEVM  112 (113)
T ss_dssp             SHHHHHHHHHHHHHTTCCCCC-CEE-C---CEEEEEEETTTEEEEEE
T ss_pred             CHHHHHHHHHHHHHCCCEEec-CcC-CC--cEEEEEECCCCcEEEEe
Confidence              7999999999999999764 332 33  38999999999999997

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8

Probab=99.75  E-value=1.6e-17  Score=121.23  Aligned_cols=126  Identities=19%  Similarity=0.209  Sum_probs=82.8

Q ss_pred             CCCCCCCCcccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCC-CCcceEEEEeCC--cEEEEeecCCCCCCCCCCCC
Q 029385            1 MKESVENPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGS-FDFDGAWLFNYG--MGIHLLKSEEPDNLPKAGKN   77 (194)
Q Consensus         1 m~~~~~~~~~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~-~~~~~~~~~~~g--~~~~l~~~~~~~~~~~~~~~   77 (194)
                      |+++=++ |++.. .||.|.|+|++++++||+++|||++..+... ..+...++...+  ..+++.......  +.   .
T Consensus         1 ~~~~~~~-m~~~~-~~i~l~v~Dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~--~~---~   73 (139)
T 1twu_A            1 MGKRFSS-FQAAQ-IRIARPTGQLDEIIRFYEEGLCLKRIGEFSQHNGYDGVMFGLPHADYHLEFTQYEGGS--TA---P   73 (139)
T ss_dssp             --CBCSS-CBCSC-EEEEEECSCHHHHHHHHTTTSCCCEEEEEEEETTEEEEEEESSSSSEEEEEEEETTCC--CC---C
T ss_pred             CCCcCCC-CCcce-eEEeeEeCCHHHHHHHHHhcCCcEEEEeccCCCCeeEEEEecCCCceEEEEeecCCCC--CC---C
Confidence            5555555 55544 4899999999999999999999998766421 111223332222  234555433211  11   2


Q ss_pred             CCCCccEEEEeeCCH---HHHHHHHHhCCCeEEccceec-CccceEEEEEeCCCCCEEEEEec
Q 029385           78 INPKDNHISFQCENM---AIVERRLKEMKIDYVKSRVEE-GGINVDQLFFHDPDGSMIEICNC  136 (194)
Q Consensus        78 ~~~g~~hiaf~v~dl---~~~~~~l~~~Gi~~~~~~~~~-~g~~~~~~~~~DPDG~~iEi~~~  136 (194)
                      ...+..|++|.|+|+   ++++++|+++|+++....... ...+   .||+|||||.|||++.
T Consensus        74 ~~~~~~hi~~~v~d~~~l~~~~~~l~~~G~~~~~~~~~~~~~~g---~~~~DPdG~~iel~~~  133 (139)
T 1twu_A           74 VPHPDSLLVFYVPNAVELAAITSKLKHMGYQEVESENPYWSNGG---VTIEDPDGWRIVFMNS  133 (139)
T ss_dssp             CCCTTCEEEEECCCHHHHHHHHHHHHHTTCCEECCSSHHHHSSE---EEEECTTCCEEEEESS
T ss_pred             CCCCccEEEEEeCCcchHHHHHHHHHHcCCcCcCCCCcccCCCC---eEEECCCCCEEEEEEc
Confidence            234678999999999   999999999999987322111 1112   2799999999999974

>1ecs_A Bleomycin resistance protein; arm-exchange, antibiotic inhibitor; HET: PG4; 1.70A {Klebsiella pneumoniae} SCOP: d.32.1.2 PDB: 1ewj_A* 1niq_B* 1mh6_A

Probab=99.74  E-value=1e-16  Score=115.08  Aligned_cols=110  Identities=16%  Similarity=0.224  Sum_probs=82.7

Q ss_pred             eeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeCCcEEEEeecCCCCCCCCCCCCCCCCccEEEEeeCCHHH
Q 029385           15 NHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQCENMAI   94 (194)
Q Consensus        15 ~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~~hiaf~v~dl~~   94 (194)
                      .++.|.|+|++++.+||++ |||++..+.+    ...++...+..+++......        ....+..|++|.|+|+++
T Consensus         5 ~~~~l~v~D~~~a~~FY~~-LG~~~~~~~~----~~~~~~~~~~~l~l~~~~~~--------~~~~~~~~~~~~v~dv~~   71 (126)
T 1ecs_A            5 ATPNLPSRDFDSTAAFYER-LGFGIVFRDA----GWMILQRGDLMLEFFAHPGL--------DPLASWFSCCLRLDDLAE   71 (126)
T ss_dssp             EEEEEEESCHHHHHHHHHT-TTCEEEEECS----SEEEEEETTEEEEEEECTTC--------CGGGCCCEEEEEESCHHH
T ss_pred             EEEEEEeCCHHHHHHHHHH-CCCEEEecCC----CEEEEEeCCEEEEEEeCCCC--------CCCCcceEEEEEECCHHH
Confidence            4899999999999999998 9999987632    23334445556777654321        112467899999999999


Q ss_pred             HHHHHHhCCCeE-------EccceecCccceEEEEEeCCCCCEEEEEecCC
Q 029385           95 VERRLKEMKIDY-------VKSRVEEGGINVDQLFFHDPDGSMIEICNCDV  138 (194)
Q Consensus        95 ~~~~l~~~Gi~~-------~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~~  138 (194)
                      +++++++.|+++       ..++... .++.+.+||+|||||.|||++...
T Consensus        72 ~~~~l~~~G~~~~~~~~~~~~~~~~~-~~g~~~~~~~DPdG~~iel~~~~~  121 (126)
T 1ecs_A           72 FYRQCKSVGIQETSSGYPRIHAPELQ-GWGGTMAALVDPDGTLLRLIQNEL  121 (126)
T ss_dssp             HHHHHHHTTCCBCSSSSSEEEEEEEC-TTSSEEEEEECTTSCEEEEEECCC
T ss_pred             HHHHHHHCCCccccccCccccCCccc-CcccEEEEEECCCCCEEEEecchh
Confidence            999999999984       4444333 234589999999999999998643

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10

Probab=99.74  E-value=5.4e-17  Score=135.42  Aligned_cols=144  Identities=13%  Similarity=0.227  Sum_probs=99.7

Q ss_pred             CcccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEe--CCc--EEEEeecCCCCCCCCCCCCCCCCcc
Q 029385            8 PLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFN--YGM--GIHLLKSEEPDNLPKAGKNINPKDN   83 (194)
Q Consensus         8 ~~~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~--~g~--~~~l~~~~~~~~~~~~~~~~~~g~~   83 (194)
                      .+.+++|+||.|.|+|++++++||+++|||++..+.+    ...++..  .+.  .++.+....    +... ....+..
T Consensus       175 ~~~~~~l~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~----~~~~~~~~~~g~~~~~~~~~~~~----~~~~-~~~~~~~  245 (338)
T 1zsw_A          175 KHQIQGMGSVELTVRRLDKMASTLTEIFGYTEVSRND----QEAIFQSIKGEAFGEIVVKYLDG----PTEK-PGRGSIH  245 (338)
T ss_dssp             GGSCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEECS----SEEEEESSTTCSTTCEEEEECCS----SBCB-CCBTCEE
T ss_pred             cccCceEEEEEEEECCHHHHHHHHHHhcCCEEEeecC----CeEEEEecCCCCceEEEEeccCC----CCCC-CCCCceE
Confidence            4678999999999999999999999999999988764    2233322  122  344443311    1111 2234678


Q ss_pred             EEEEeeC---CHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEecCCCCcCcCCCcchhhcccccccch
Q 029385           84 HISFQCE---NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVVPLAGDAVRIRSCTSTVNC  160 (194)
Q Consensus        84 hiaf~v~---dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~~~p~~p~~~~~~~~~~~~~~~~~  160 (194)
                      |++|.|+   |+++++++|++.|+++. ++....  +.+.+||+|||||.|||++..  |.+.....+ ..+  |+++++
T Consensus       246 hiaf~v~~~~dv~~~~~~l~~~G~~~~-~~~~~~--~~~~~~~~DPdG~~iEl~~~~--~~~~~d~~~-~~~--~~~l~~  317 (338)
T 1zsw_A          246 HLAIRVKNDAELAYWEEQVKQRGFHSS-GIIDRF--YFKSLYFRESNGILFEIATDG--PGFTVDGDV-EHL--GEKLDL  317 (338)
T ss_dssp             EEEEEESSHHHHHHHHHHHHHTTCCCC-CCEECS--SEEEEEEECTTCCEEEEEEEE--ECTTTTSCG-GGT--TSSBCC
T ss_pred             EEEEEeCCHHHHHHHHHHHHHCCCcee-eeeecC--ceEEEEEECCCCCEEEEEEcC--CCccccCCc-ccc--CCccCC
Confidence            9999999   79999999999999985 443333  348899999999999999864  234333332 223  488887


Q ss_pred             hhhhhhhh
Q 029385          161 NFHQQQIQ  168 (194)
Q Consensus       161 ~~~~~~~~  168 (194)
                      ....++++
T Consensus       318 ~~~~~~~~  325 (338)
T 1zsw_A          318 PPFLEDQR  325 (338)
T ss_dssp             CGGGGGGH
T ss_pred             cHHHHHHH
Confidence            66654433

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans}

Probab=99.74  E-value=8.9e-17  Score=117.43  Aligned_cols=122  Identities=20%  Similarity=0.139  Sum_probs=83.6

Q ss_pred             ceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeCCcEEEEeecCCC--CCCCCCCCCCCCCccEEEEee
Q 029385           12 KSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEP--DNLPKAGKNINPKDNHISFQC   89 (194)
Q Consensus        12 ~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~--~~~~~~~~~~~~g~~hiaf~v   89 (194)
                      ++++|+.|.|+|++++.+||+++|||++..+....  ...++...+..+.+......  -..+........+ .|++|.|
T Consensus         7 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~--~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~-~~~~f~v   83 (141)
T 2rbb_A            7 ADLSYVNIFTRDIVAMSAFYQQVFGFQEIESIRSP--IFRGLDTGKSCIGFNAHEAYELMQLAQFSETSGIK-FLLNFDV   83 (141)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHHHCCEECGGGCBT--TEEEEECSSSEEEEECTHHHHHTTCGGGCCCBSCC-EEEEEEC
T ss_pred             CcccEEEEEECCHHHHHHHHHHhcCCeeecccCCC--ceEEeecCCEEEEEcCccccccccccccCCCCCCe-EEEEEEc
Confidence            38999999999999999999999999987653211  22233333344444321000  0000000012233 5999999


Q ss_pred             C---CHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEecC
Q 029385           90 E---NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD  137 (194)
Q Consensus        90 ~---dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~  137 (194)
                      +   |+++++++|++.|+++..++.... ++.+.+||+|||||.|||++..
T Consensus        84 ~~~~dv~~~~~~l~~~G~~~~~~~~~~~-~g~~~~~~~DPdG~~iel~~~~  133 (141)
T 2rbb_A           84 DTKEAVDKLVPVAIAAGATLIKAPYETY-YHWYQAVLLDPERNVFRINNVL  133 (141)
T ss_dssp             SCHHHHHHHHHHHHHTTCEEEEEEEECT-TSEEEEEEECTTSCEEEEEEEC
T ss_pred             CCHHHHHHHHHHHHHcCCeEecCccccC-CccEEEEEECCCCCEEEEEEcc
Confidence            9   599999999999999887664433 3458999999999999999864

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp}

Probab=99.73  E-value=5.9e-17  Score=135.73  Aligned_cols=120  Identities=13%  Similarity=0.193  Sum_probs=88.8

Q ss_pred             CCcccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeC--CcEEEEeecCCCCCCCCCCCCCCCCccE
Q 029385            7 NPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNY--GMGIHLLKSEEPDNLPKAGKNINPKDNH   84 (194)
Q Consensus         7 ~~~~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~--g~~~~l~~~~~~~~~~~~~~~~~~g~~h   84 (194)
                      ..+.+++|+||+|.|+|++++.+||+++|||++..+.+    ....+...  +..++++.....   +... ....+++|
T Consensus       147 ~~~~i~gl~Hv~L~v~Dle~t~~FY~~vLG~~~~~~~~----~~~~~~~g~~~~~l~l~~~~~~---~~~~-~g~g~~~H  218 (335)
T 3oaj_A          147 PDVAIKGFGGATLLSEQPDKTADLLENIMGLERVGKEG----DFVRYRSAGDIGNVIDLKLTPI---GRGQ-MGAGTVHH  218 (335)
T ss_dssp             TTTSCCEEEEEEEECSSHHHHHHHHHHTSCCEEEEEET----TEEEEECSSSSSCEEEEESSCC---CBCB-CSBTEEEE
T ss_pred             hhhhhccccceEEEECCHHHHHHHHHHHhCCEEeeccC----CEEEEEeCCCCcEEEEEeCCCC---CcCC-CCCcceEE
Confidence            34578999999999999999999999999999998753    22333222  245677654321   1111 23356899


Q ss_pred             EEEeeCC---HHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEecC
Q 029385           85 ISFQCEN---MAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD  137 (194)
Q Consensus        85 iaf~v~d---l~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~  137 (194)
                      +||.|+|   ++++.++|++.|+.+.... ...  +.+++||+||||++|||++..
T Consensus       219 iAf~v~d~~~l~~~~~~L~~~G~~~~~~~-~r~--~~~siYfrDP~G~~iEl~td~  271 (335)
T 3oaj_A          219 IAWRANDDEDQLDWQRYIASHGYGVTPVR-DRN--YFNAIYFREHGEILFEIATDP  271 (335)
T ss_dssp             EEEEESSHHHHHHHHHHHHHTTCCCCCCE-ECS--SSEEEEEECTTSCEEEEEESC
T ss_pred             EEEEcCCHHHHHHHHHHHHHCCCCccccc-cCC--cEEEEEEECCCCcEEEEEeCC
Confidence            9999997   7779999999999865432 322  238999999999999999874

>4ghg_A Homoprotocatechuate 2,3-dioxygenase; oxygen activation, Fe(II), 2-His-1-carboxylate triad, 4-nitrocatechol, OXY complex, oxidoreductase; HET: P6G PG4 DHY; 1.50A {Brevibacterium fuscum} PDB: 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* 3ojn_A* 4ghh_A* 4ghc_A 4ghd_A* 4ghe_A* 4ghf_A* 3eck_A* 3ecj_A*

Probab=99.73  E-value=4.4e-17  Score=138.01  Aligned_cols=122  Identities=18%  Similarity=0.172  Sum_probs=91.2

Q ss_pred             CCCCCCCC----cccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeCCc----EEEEeecCCCCCCC
Q 029385            1 MKESVENP----LCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGM----GIHLLKSEEPDNLP   72 (194)
Q Consensus         1 m~~~~~~~----~~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~g~----~~~l~~~~~~~~~~   72 (194)
                      |++.+|.|    ..|.+|+||.|.|+|++++.+||+++|||++..+.+    ...|+...+.    .+.+..        
T Consensus         1 Ms~~~P~P~~P~p~I~rl~hV~l~V~DLe~s~~FY~dvLGL~~~~~~~----~~~~lr~~~~~~~~~l~l~~--------   68 (365)
T 4ghg_A            1 MSNEIPKPVAPAPDILRCAYAELVVTDLAKSRNFYVDVLGLHVSYEDE----NQIYLRSFEEFIHHNLVLTK--------   68 (365)
T ss_dssp             --CCCCCCSSCCCCEEEEEEEEEEESCHHHHHHHHTTTTCCEEEEECS----SEEEEECTTCCSSCSEEEEE--------
T ss_pred             CCCCCCCCCCCCCCCCEEEEEEEEeCCHHHHHHHHhhCCCCEEEEEcC----CEEEEEeCCCCcceEEEecc--------
Confidence            77777654    358999999999999999999999999999998864    4556544431    122221        


Q ss_pred             CCCCCCCCCccEEEEeeC---CHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEecCC
Q 029385           73 KAGKNINPKDNHISFQCE---NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV  138 (194)
Q Consensus        73 ~~~~~~~~g~~hiaf~v~---dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~~  138 (194)
                          ...+++.|++|.|.   +++++.++|++.|+++...+........+.++|.||||+.|||+....
T Consensus        69 ----~~~~gl~~~a~~v~s~~dLd~~~~~L~~~Gv~v~~~~~~~~~~~g~~~~f~DPdG~~iEl~~~~~  133 (365)
T 4ghg_A           69 ----GPVAALKAMAFRVRTPEDVDKAEAYYQELGCRTERRKDGFVKGIGDALRVEDPLGFPYEFFFETT  133 (365)
T ss_dssp             ----CSSCEEEEEEEEESSHHHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECCBC
T ss_pred             ----CCCCCcceEEEEeCCHHHHHHHHHHHHHcCCcceeccccccCCCceEEEEECCCCCEEEEEEEee
Confidence                22357889999997   589999999999999876543222223488999999999999997543

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP}

Probab=99.72  E-value=3.2e-16  Score=113.76  Aligned_cols=118  Identities=14%  Similarity=0.117  Sum_probs=83.9

Q ss_pred             eeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCC-cceEEEEeCCcEEEEeecCCCCCCCCCCCCCCCCcc-EEEEeeCCH
Q 029385           15 NHISLVCRSVEASLDFYQNVLGFFPIRRPGSFD-FDGAWLFNYGMGIHLLKSEEPDNLPKAGKNINPKDN-HISFQCENM   92 (194)
Q Consensus        15 ~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~-~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~~-hiaf~v~dl   92 (194)
                      ..+.|.|+|++++++||+++|||++..+..... .....+...+..+.+..... ....  . ....... |++|.|+|+
T Consensus         4 ~~i~l~v~D~~~a~~FY~~~lG~~~~~~~~~~g~~~~~~l~~~~~~l~l~~~~~-~~~~--~-~~~~~~~~~~~~~v~dv   79 (137)
T 3itw_A            4 MVVELAYTDPDRAVDWLVRVFGFRLLLRQPAIGTIRHADLDTGGGIVMVRRTGE-PYTV--S-CAGGHTCKQVIVWVSDV   79 (137)
T ss_dssp             CEEEEEESCHHHHHHHHHHHHCCEEEEEESSSSSCSEEEEECSSSEEEEEETTC-CSSC--E-ECCCCCCCEEEEEESCH
T ss_pred             EEEEEEECCHHHHHHHHHHccCCEEEEEecCCCcEEEEEEecCCeEEEEEecCC-CcCc--c-CCCCCcEEEEEEEeCCH
Confidence            368999999999999999999999987643211 11222233445566654321 1111  1 1122334 999999999


Q ss_pred             HHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEecC
Q 029385           93 AIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD  137 (194)
Q Consensus        93 ~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~  137 (194)
                      ++++++|+++|+++..++.... ++.+.++|+|||||.|||++..
T Consensus        80 ~~~~~~l~~~G~~~~~~~~~~~-~g~~~~~~~DPdG~~iel~~~~  123 (137)
T 3itw_A           80 DEHFMRSTAAGADIVQPLQDKP-WGLRQYLVRDLEGHLWEFTRHL  123 (137)
T ss_dssp             HHHHHHHHHTTCEEEEEEEEET-TTEEEEEEECSSSCEEEEEECC
T ss_pred             HHHHHHHHHcCCeeccCccccC-CCcEEEEEECCCCCEEEEEEEc
Confidence            9999999999999887664433 3458999999999999999864

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus}

Probab=99.72  E-value=2e-16  Score=116.23  Aligned_cols=124  Identities=15%  Similarity=0.168  Sum_probs=82.8

Q ss_pred             ccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeCCcEEEEeecCCCCC-CC--CCCCCCCCCccEEE
Q 029385           10 CLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDN-LP--KAGKNINPKDNHIS   86 (194)
Q Consensus        10 ~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~-~~--~~~~~~~~g~~hia   86 (194)
                      +++++ .+.|.|+|++++++||+++|||++..+....  ...++...+..++|........ ..  ........+. +++
T Consensus         3 ~~~~~-~~~l~v~Dl~~s~~FY~~~LG~~~~~~~~~~--~~~~l~~g~~~l~l~~~~~~~~~~~~~~~~~~~~~g~-~~~   78 (145)
T 2rk9_A            3 LTLRV-VPELYCFDINVSQSFFVDVLGFEVKYERPDE--EFVYLTLDGVDVMLEGIAGKSRKWLSGDLEFPLGSGV-NFQ   78 (145)
T ss_dssp             -CCCE-EEEEEESSHHHHHHHHHHTTCCEEEEEEGGG--TEEEEEETTEEEEEEEC-----------CCSSTTTTE-EEE
T ss_pred             ccccc-eEEEEECCHHHHHHHHHhccCCEEEeecCCC--CEEEEEcCCeEEEEEeccCCCcccccCccccCCCCce-EEE
Confidence            34454 6999999999999999999999987532111  2344444555666665421111 00  0010222344 499


Q ss_pred             EeeCCHHHHHHHHHh-CCCeEEccceec------CccceEEEEEeCCCCCEEEEEecC
Q 029385           87 FQCENMAIVERRLKE-MKIDYVKSRVEE------GGINVDQLFFHDPDGSMIEICNCD  137 (194)
Q Consensus        87 f~v~dl~~~~~~l~~-~Gi~~~~~~~~~------~g~~~~~~~~~DPDG~~iEi~~~~  137 (194)
                      |.|+|+++++++|++ .|+++..++...      .+.+.+.++|+|||||.|||++..
T Consensus        79 ~~v~dvd~~~~~l~~~~G~~~~~~~~~~~~g~~~~~~~~~~~~~~DPdG~~iel~~~~  136 (145)
T 2rk9_A           79 WDVIDIEPLYQRVNESAADSIYLALESKSYQCGDSIATQKQFMVQTPDGYLFRFCQDI  136 (145)
T ss_dssp             EECSCHHHHHHHHHHHHGGGEEEEEEEEEC-----CCEEEEEEEECTTCCEEEEEEC-
T ss_pred             EEECCHHHHHHHHHhhCCCeEecCccccccccCCCCCcceEEEEECCCCCEEEEEEcC
Confidence            999999999999999 999988765421      223458899999999999999853

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A*

Probab=99.71  E-value=2.2e-16  Score=127.45  Aligned_cols=141  Identities=15%  Similarity=0.166  Sum_probs=97.5

Q ss_pred             cccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeCCcEEEEeecCCCCCCCCCCCCCCCCccEEEEe
Q 029385            9 LCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQ   88 (194)
Q Consensus         9 ~~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~~hiaf~   88 (194)
                      ..+++|+||.|.|+|++++.+||+++|||++..+..    ...++...+..+.+.....          ...+..|++|.
T Consensus        22 ~~~~~l~hV~L~V~Dle~s~~FY~~vLGl~~~~~~~----~~~~L~~g~~~l~l~~~~~----------~~~~~~hiaf~   87 (252)
T 3pkv_A           22 GHMTSIKQLTLYTAELDRMLAFYTNMLGAQHVHEQA----DAFTIQLGVSQIQFRAAAD----------GTKPFYHIAIN   87 (252)
T ss_dssp             ---CCEEEEEEEESCHHHHHHHHHHHHCGGGEEECS----SEEEEEETTEEEEEEECCT----------TCCCCCEEEEE
T ss_pred             CcCceEEEEEEEeCCHHHHHHHHHHhcCCEEEEccC----CEEEEEeCCEEEEEEECCC----------CCCCeeEEEEE
Confidence            468899999999999999999999999999988764    3455555555555554321          12357899998


Q ss_pred             eC--CHHHHHHHHHhCCCeEEcc-cee---cCccceEEEEEeCCCCCEEEEEecCCCCcC---cC-----CCcchhhccc
Q 029385           89 CE--NMAIVERRLKEMKIDYVKS-RVE---EGGINVDQLFFHDPDGSMIEICNCDVLPVV---PL-----AGDAVRIRSC  154 (194)
Q Consensus        89 v~--dl~~~~~~l~~~Gi~~~~~-~~~---~~g~~~~~~~~~DPDG~~iEi~~~~~~p~~---p~-----~~~~~~~~~~  154 (194)
                      |+  ++++++++|++. +++..+ +..   ...++.+.+||+|||||.|||++....+.|   |+     ..-+.|.+.+
T Consensus        88 V~~~dld~~~~rL~~~-v~~~~~~~~~~~~~~~~g~~~~~f~DPdGn~iEl~~~~~~~~~~~~~~~~~~i~glghV~L~v  166 (252)
T 3pkv_A           88 IAANHFQEGKAWLSGF-GELLTENDEDQAYFPFFNAYSCYVEDPSGNIIELISRQQAAPVLDKPFSADQLLSIGEINITT  166 (252)
T ss_dssp             ECTTCHHHHHHHHTTS-SCCCCBTTBSCEEETTTTEEEEEEECTTCCEEEEEEESSSSCCCCSCCCGGGCCEEEEEEEEC
T ss_pred             ecHHHHHHHHHHHHhc-ceEeccCCccccccccCCeEEEEEECCCCCEEEEEEeCCCCccccCCCCHHHCcEeeeEEEEe
Confidence            86  799999999999 988652 211   123356999999999999999997654311   11     1234566666


Q ss_pred             ccccchhhhhhhh
Q 029385          155 TSTVNCNFHQQQI  167 (194)
Q Consensus       155 ~~~~~~~~~~~~~  167 (194)
                         .|++...+-+
T Consensus       167 ---~d~~~~~~fl  176 (252)
T 3pkv_A          167 ---SDVEQAATRL  176 (252)
T ss_dssp             ---SCHHHHHHHH
T ss_pred             ---CCHHHHHHHH
Confidence               4555554433

>3bt3_A Glyoxalase-related enzyme, ARAC type; VOC superfamily, PSI-2, NYSGXRC, structural genomics, prote structure initiative; 2.50A {Clostridium phytofermentans}

Probab=99.71  E-value=1.3e-16  Score=117.71  Aligned_cols=119  Identities=13%  Similarity=0.137  Sum_probs=78.5

Q ss_pred             ccceeeeEEEEcCCHHHHHHHHHHccCCeEee--eCCCCCcceEEEEeCCcEEEEeecCCCCCCCCCCCC-----CCCCc
Q 029385           10 CLKSLNHISLVCRSVEASLDFYQNVLGFFPIR--RPGSFDFDGAWLFNYGMGIHLLKSEEPDNLPKAGKN-----INPKD   82 (194)
Q Consensus        10 ~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~--~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~-----~~~g~   82 (194)
                      .+.+++|+.|.|+|++++.+||+++|||++..  ... .  ...++   |..+++ ....+...+.....     ..+..
T Consensus        18 ~~~~~~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~-~--~~~~~---g~~l~l-~~~~~~~~~~~~~~~~~~~g~~~~   90 (148)
T 3bt3_A           18 YVVRENGPVYFTKDMDKTVKWFEEILGWSGDIVARDD-E--GFGDY---GCVFDY-PSEVAVAHLTPFRGFHLFKGEPIK   90 (148)
T ss_dssp             CEEEECCCEEEESCHHHHHHHHHHTTCCEEEEEEECT-T--SCEEE---EEEESS-CTTTTSCC--CCCSEEEEESCCCS
T ss_pred             ceEEeeeEEEEECCHHHHHHHHHhccCCEEEeeeecC-C--CccEE---ccEEEE-eccCCCcccccccccceeeccCCC
Confidence            46789999999999999999999999999853  211 1  23343   323222 01111111000000     00111


Q ss_pred             cEEEE-eeCCHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEec
Q 029385           83 NHISF-QCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC  136 (194)
Q Consensus        83 ~hiaf-~v~dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~  136 (194)
                      .+.+| .|+|+++++++|+++|+++..++...+ ++.+.+||+|||||.|||++.
T Consensus        91 ~~~~~~~v~dvd~~~~~l~~~G~~~~~~~~~~~-~g~~~~~~~DPdG~~iel~~~  144 (148)
T 3bt3_A           91 GVAGFMMIEGIDALHKYVKENGWDQISDIYTQP-WGARECSITTTDGCILRFFES  144 (148)
T ss_dssp             SEEEEEEEECHHHHHHHHHHTTCCCBCCCEEET-TTEEEEEEECTTSCEEEEEEE
T ss_pred             ccEEEEEcCCHHHHHHHHHHcCCccccCcccCC-CccEEEEEECCCCCEEEEeee
Confidence            22265 999999999999999999887664433 445899999999999999974

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A

Probab=99.69  E-value=3.2e-16  Score=128.68  Aligned_cols=113  Identities=17%  Similarity=0.204  Sum_probs=86.2

Q ss_pred             CcccceeeeEEEEcCCHHHHHHHHHHccCCeEee-eCCCCCcceEEEEeCC--cEEEEeecCCCCCCCCCCCCCCCCccE
Q 029385            8 PLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIR-RPGSFDFDGAWLFNYG--MGIHLLKSEEPDNLPKAGKNINPKDNH   84 (194)
Q Consensus         8 ~~~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~-~~~~~~~~~~~~~~~g--~~~~l~~~~~~~~~~~~~~~~~~g~~h   84 (194)
                      ||.+++|+||.|.|+|++++++||+++|||++.. +.+    ...++...+  ..+.+....            ..+..|
T Consensus         1 Mm~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~----~~~~~~~~~~~~~l~l~~~~------------~~~~~~   64 (305)
T 2wl9_A            1 MAKVTELGYLGLSVSNLDAWRDYAAGIMGMQVVDDGED----DRIYLRMDRWHHRIVLHADG------------SDDLAY   64 (305)
T ss_dssp             CCCCCEEEEEEEECSCHHHHHHHHTTTTCCEEECCSCT----TEEEEECSSBSCSEEEECSS------------CCEEEE
T ss_pred             CCccceeeEEEEEeCCHHHHHHHHHhccCCEEeeccCC----CeEEEEeCCCeEEEEEEECC------------CCCeEE
Confidence            3678999999999999999999999999999987 432    344544333  334443211            246789


Q ss_pred             EEEeeC---CHHHHHHHHHhCCCeEEccceec--CccceEEEEEeCCCCCEEEEEec
Q 029385           85 ISFQCE---NMAIVERRLKEMKIDYVKSRVEE--GGINVDQLFFHDPDGSMIEICNC  136 (194)
Q Consensus        85 iaf~v~---dl~~~~~~l~~~Gi~~~~~~~~~--~g~~~~~~~~~DPDG~~iEi~~~  136 (194)
                      ++|.|+   |+++++++|+++|+++...+...  .....+.+||+|||||.|||++.
T Consensus        65 ~~f~v~~~~dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~~~DPdG~~iel~~~  121 (305)
T 2wl9_A           65 IGWRVAGPVELDELAEQLKNAGIPFEVASDADAAERRVLGLVKLHDPGGNPTEIFYG  121 (305)
T ss_dssp             EEEECSSHHHHHHHHHHHHHTTCCCEECCHHHHHHTTEEEEEEEECTTCCEEEEEEE
T ss_pred             EEEEECCHHHHHHHHHHHHHCCCceEeCCcccccccCcEEEEEEECCCCCEEEEEEC
Confidence            999997   69999999999999987655322  11234889999999999999987

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A*

Probab=99.68  E-value=2.5e-16  Score=129.53  Aligned_cols=116  Identities=15%  Similarity=0.224  Sum_probs=87.1

Q ss_pred             CcccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeCC----cEEEEeecCCCCCCCCCCCCCCCCcc
Q 029385            8 PLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYG----MGIHLLKSEEPDNLPKAGKNINPKDN   83 (194)
Q Consensus         8 ~~~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~g----~~~~l~~~~~~~~~~~~~~~~~~g~~   83 (194)
                      +|.+++|+||.|.|+|++++.+||+++|||++..+.+.   ...++...+    ..+.+...            ..++..
T Consensus         3 m~~i~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~---~~~~l~~~~~~~~~~l~l~~~------------~~~~~~   67 (309)
T 3hpy_A            3 MTGVLRPGHAQVRVLNLEEGIHFYRNVLGLVETGRDDQ---GRVYFKCWDERDHSCYIIREA------------DTAGID   67 (309)
T ss_dssp             BCSEEEEEEEEEEESSHHHHHHHHHHTSCCEEEEECTT---SCEEEECTTCCBSCSEEEEEC------------SSCEEE
T ss_pred             ccccceeeEEEEEcCCHHHHHHHHHhccCCEEEEEcCC---CeEEEEeccCCCceEEEEEeC------------CCCcee
Confidence            35789999999999999999999999999999887531   234544322    12333221            124788


Q ss_pred             EEEEeeCC---HHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEecCC
Q 029385           84 HISFQCEN---MAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV  138 (194)
Q Consensus        84 hiaf~v~d---l~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~~  138 (194)
                      |++|.|++   +++++++|++.|+++...+......+.+.+||+|||||.|||++...
T Consensus        68 h~a~~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~f~DPdG~~iel~~~~~  125 (309)
T 3hpy_A           68 FFGFKVLDKATLEKLDADLQAYGLTTTRIPAGEMLETGERVRFELPSGHLIELYAEKT  125 (309)
T ss_dssp             EEEEEESCHHHHHHHHHHHHHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESCBC
T ss_pred             EEEEEECCHHHHHHHHHHHHhCCCceeeccCCccCCCeeEEEEECCCCCEEEEEEccc
Confidence            99999996   99999999999999876543211223489999999999999998654

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10

Probab=99.68  E-value=6.3e-16  Score=128.93  Aligned_cols=125  Identities=16%  Similarity=0.229  Sum_probs=89.3

Q ss_pred             CCc-ccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEE--EeC-----CcEEEEeecCCCCCCCCCCCCC
Q 029385            7 NPL-CLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWL--FNY-----GMGIHLLKSEEPDNLPKAGKNI   78 (194)
Q Consensus         7 ~~~-~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~--~~~-----g~~~~l~~~~~~~~~~~~~~~~   78 (194)
                      ++| .+++|+||.|.|+|++++++||+++|||++..+....+....+.  +..     +..+.+......  ... . ..
T Consensus        23 ~~m~~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~l~~~~~~--~~~-~-~~   98 (338)
T 1zsw_A           23 NAMYEIKGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFEIPLV--GRT-Y-RG   98 (338)
T ss_dssp             CCSSCCCSEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEETTEEEEEEEEEESTTCCTTSEEEEEECTTC--CBC-B-CC
T ss_pred             CccCcCccccEEEEEcCCHHHHHHHHHHhcCCEEEEeecccCCCceEEEEEcCCCCCCCCEEEEEECCCC--ccC-c-CC
Confidence            344 68999999999999999999999999999887642111122221  222     244555543221  111 1 22


Q ss_pred             CCCccEEEEeeC---CHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEecCC
Q 029385           79 NPKDNHISFQCE---NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV  138 (194)
Q Consensus        79 ~~g~~hiaf~v~---dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~~  138 (194)
                      ..+..|++|.|+   |+++++++|++.|+++...+. ..|  .+.+||+|||||.|||++...
T Consensus        99 ~~~~~hiaf~v~~~~dld~~~~~l~~~G~~~~~~~~-~~G--~~~~~f~DPdG~~iel~~~~~  158 (338)
T 1zsw_A           99 TNAITRIGLLVPSEDSLHYWKERFEKFDVKHSEMTT-YAN--RPALQFEDAEGLRLVLLVSNG  158 (338)
T ss_dssp             BSEEEEEEEEESCHHHHHHHHHHHHHTTCEECCSEE-ETT--EEEEEEECTTCCEEEEEECTT
T ss_pred             CCCeeeEEEEcCCHHHHHHHHHHHHHCCCccccccc-cCC--cEEEEEECCCCCEEEEEEcCC
Confidence            346789999998   799999999999999886543 333  389999999999999998764

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii}

Probab=99.68  E-value=4.6e-16  Score=130.11  Aligned_cols=121  Identities=19%  Similarity=0.260  Sum_probs=88.1

Q ss_pred             CcccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCC-CCcceEEEEeCC--cEEEEeecCCCCCCCCCCCCCCCCccE
Q 029385            8 PLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGS-FDFDGAWLFNYG--MGIHLLKSEEPDNLPKAGKNINPKDNH   84 (194)
Q Consensus         8 ~~~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~-~~~~~~~~~~~g--~~~~l~~~~~~~~~~~~~~~~~~g~~h   84 (194)
                      .+.+.+|+||.|.|+|++++.+||+++|||++..+... ......|+...+  ..+.+.....         ...++..|
T Consensus       148 g~~~~~l~Hv~l~v~D~~~a~~FY~~vLG~~~~~~~~~~g~~~~~~l~~~~~~~~l~~~~~~~---------~~~~~~~H  218 (339)
T 3lm4_A          148 GIPVKRIDHLNLMSSDVTAVKDSFERHLGFRTTERVVDGNVEIGAWMSSNLLGHEVACMRDMT---------GGHGKLHH  218 (339)
T ss_dssp             SSCCCEEEEEEEEESCHHHHHHHHHHHHCCEEEEEEEETTEEEEEEEESSSSSCSEEEEECTT---------SCCSEEEE
T ss_pred             CCCcceeeeEEEEcCCHHHHHHHHHHhCCCeEEEEEecCCcEEEEEEEeCCCceEEEEeccCC---------CCCCceeE
Confidence            45789999999999999999999999999998876420 001123433222  2344443110         22357899


Q ss_pred             EEEeeCC---HHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEecC
Q 029385           85 ISFQCEN---MAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD  137 (194)
Q Consensus        85 iaf~v~d---l~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~  137 (194)
                      ++|.|+|   +++++++|+++|+++...+........+.+||+|||||.|||+...
T Consensus       219 iaf~v~d~~~v~~~~~~l~~~G~~i~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~~  274 (339)
T 3lm4_A          219 LAFFYGTGQHNIDAVEMFRDYDIQIEAGPDKHGITQSQFLYVFEPGGNRIELFGEA  274 (339)
T ss_dssp             EEEECCCHHHHHHHHHHHHHTTCEEEEEEEEETGGGEEEEEEECTTSCEEEEECCC
T ss_pred             EEEEeCCHHHHHHHHHHHHHCCCeEEeCCcccccCCceEEEEEcCCCCEEEEEEcC
Confidence            9999998   8888999999999988766443333347899999999999998654

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A*

Probab=99.67  E-value=5.7e-16  Score=127.41  Aligned_cols=119  Identities=20%  Similarity=0.230  Sum_probs=84.5

Q ss_pred             CcccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCC---cceEEEEeCCc--EEEEeecCCCCCCCCCCCCCCCCc
Q 029385            8 PLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFD---FDGAWLFNYGM--GIHLLKSEEPDNLPKAGKNINPKD   82 (194)
Q Consensus         8 ~~~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~---~~~~~~~~~g~--~~~l~~~~~~~~~~~~~~~~~~g~   82 (194)
                      .+.+.+|+||.|.|+|++++.+||+++|||++..+....+   ....|+...+.  .+.+...           ...++.
T Consensus       146 ~~~~~~i~Hv~l~v~D~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~  214 (309)
T 3hpy_A          146 GIAPIQLDHCLLYGPNIAEVQKIFTEVLGFYLVERVLSPDGDSDMGIWLSCSHKVHDIAFVEY-----------PEKGKL  214 (309)
T ss_dssp             SSCCSEEEEEEEEESCHHHHHHHHHHTSCCEEEEEEECSSSCSEEEEEEESSSSSCSEEEEEC-----------SSTTEE
T ss_pred             CcccceeeeEEEEeCCHHHHHHHHHHhcCCEEEEEEecCCCCceEEEEEecCCCceeEEEecC-----------CCCCce
Confidence            3568999999999999999999999999999876542111   12234332221  1222211           113468


Q ss_pred             cEEEEeeCCHHH---HHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEecC
Q 029385           83 NHISFQCENMAI---VERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD  137 (194)
Q Consensus        83 ~hiaf~v~dl~~---~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~  137 (194)
                      .|+||.|+|+++   ++++|+++|+++...+........+.+||+|||||.|||+...
T Consensus       215 ~Hiaf~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~g  272 (309)
T 3hpy_A          215 HHCSFLLESWEQVLRAGDIMSMNEVNVDIGPTRHGVTRGCTIYAWDPSGNRFETFMGG  272 (309)
T ss_dssp             EEEEEECSSHHHHHHHHHHHHHTTCCBSSCSEECSSSSEEEEEEECTTSCEEEEEEEC
T ss_pred             eEEEEECCCHHHHHHHHHHHHHCCCEEEeCCccCCCCccEEEEEECCCCCEEEEEeCC
Confidence            999999997654   6789999999987665443322347899999999999999874

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A*

Probab=99.67  E-value=6e-16  Score=126.57  Aligned_cols=112  Identities=16%  Similarity=0.291  Sum_probs=82.7

Q ss_pred             cccceeeeEEEEcCCHHHHHHHHHHccCCeEee-eCCCCCcceEEEEeCCc--EEEEeecCCCCCCCCCCCCCCCCccEE
Q 029385            9 LCLKSLNHISLVCRSVEASLDFYQNVLGFFPIR-RPGSFDFDGAWLFNYGM--GIHLLKSEEPDNLPKAGKNINPKDNHI   85 (194)
Q Consensus         9 ~~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~-~~~~~~~~~~~~~~~g~--~~~l~~~~~~~~~~~~~~~~~~g~~hi   85 (194)
                      |++++|+||.|.|+|++++++||+++|||++.. +.+    ...++...+.  .+.+...            ...+..|+
T Consensus         1 M~i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~----~~~~~~~~~~~~~l~l~~~------------~~~~~~~~   64 (300)
T 2zyq_A            1 MSIRSLGYLRIEATDMAAWREYGLKVLGMVEGKGAPE----GALYLRMDDFPARLVVVPG------------EHDRLLEA   64 (300)
T ss_dssp             -CCCEEEEEEEEESCHHHHHHHHHHTSCCEECSSCCS----SCEEEESSSSSCSEEEEEC------------SSCEEEEE
T ss_pred             CCcceEEEEEEEeCCHHHHHHHHHHccCCEEeccCCC----CeEEEEeCCCcEEEEEecC------------CCCCcceE
Confidence            568899999999999999999999999999987 542    3344433222  2333221            12467899


Q ss_pred             EEeeC---CHHHHHHHHHhCCCeEEccceec--CccceEEEEEeCCCCCEEEEEec
Q 029385           86 SFQCE---NMAIVERRLKEMKIDYVKSRVEE--GGINVDQLFFHDPDGSMIEICNC  136 (194)
Q Consensus        86 af~v~---dl~~~~~~l~~~Gi~~~~~~~~~--~g~~~~~~~~~DPDG~~iEi~~~  136 (194)
                      +|.|+   |+++++++|++.|+++...+...  ...+.+.+||+|||||.|||++.
T Consensus        65 ~~~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  120 (300)
T 2zyq_A           65 GWECANAEGLQEIRNRLDLEGTPYKEATAAELADRRVDEMIRFADPSGNCLEVFHG  120 (300)
T ss_dssp             EEECSSHHHHHHHHHHHHHHTCCCEECCHHHHHHHTCSEEEEEECTTCCEEEEEEC
T ss_pred             EEEeCCHHHHHHHHHHHHHcCCeEEeCChhhcccccceEEEEEECCCCCEEEEEEc
Confidence            99997   48999999999999987654321  01123889999999999999987

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A*

Probab=99.66  E-value=7.4e-16  Score=125.83  Aligned_cols=114  Identities=16%  Similarity=0.174  Sum_probs=84.9

Q ss_pred             cceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeCCcEEEEeecCCCCCCCCCCCCCCCCccEEEEeeC
Q 029385           11 LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQCE   90 (194)
Q Consensus        11 i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~~hiaf~v~   90 (194)
                      +++|+||.|.|+|++++++||+++|||++..+.+    ...++...+..+.+....          ...++..|++|.|+
T Consensus         2 i~~i~hv~l~v~Dl~~s~~FY~~~LG~~~~~~~~----~~~~~~~~~~~~~l~~~~----------~~~~~~~~~~f~v~   67 (297)
T 1lgt_A            2 IRSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTD----NGDLFRIDSRAWRIAVQQ----------GEVDDLAFAGYEVA   67 (297)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET----TEEEEESSSBSCSEEEEE----------CTTCEEEEEEEEES
T ss_pred             ceEEEEEEEEcCCHHHHHHHHHHccCCEEeecCC----CeEEEEeCCCcEEEEEec----------CCCCCccEEEEEeC
Confidence            6789999999999999999999999999988753    344443333222222211          11246789999998


Q ss_pred             ---CHHHHHHHHHhCCCeEEccceec--CccceEEEEEeCCCCCEEEEEecCC
Q 029385           91 ---NMAIVERRLKEMKIDYVKSRVEE--GGINVDQLFFHDPDGSMIEICNCDV  138 (194)
Q Consensus        91 ---dl~~~~~~l~~~Gi~~~~~~~~~--~g~~~~~~~~~DPDG~~iEi~~~~~  138 (194)
                         |+++++++|++.|+++...+...  ...+.+.+||.|||||.|||++...
T Consensus        68 ~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~  120 (297)
T 1lgt_A           68 DAAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITFADPFGLPLEIYYGAS  120 (297)
T ss_dssp             SHHHHHHHHHHHHHTTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEECCC
T ss_pred             CHHHHHHHHHHHHHCCCeEEeCCccccccCCceeEEEEECCCCCEEEEEECcc
Confidence               99999999999999987654321  1122389999999999999998754

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A

Probab=99.66  E-value=3.9e-16  Score=128.14  Aligned_cols=117  Identities=13%  Similarity=0.115  Sum_probs=85.6

Q ss_pred             CCCcccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeCC--cEEEEeecCCCCCCCCCCCCCCCCcc
Q 029385            6 ENPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYG--MGIHLLKSEEPDNLPKAGKNINPKDN   83 (194)
Q Consensus         6 ~~~~~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~g--~~~~l~~~~~~~~~~~~~~~~~~g~~   83 (194)
                      ++.|.+++|+||.|.|+|++++++||+++|||++..+..   ....|+...+  ..+.+...            ...+..
T Consensus         2 ~~~m~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~---~~~~~~~~~~~~~~l~l~~~------------~~~~~~   66 (302)
T 2ehz_A            2 SKQAAVIELGYMGISVKDPDAWKSFATDMLGLQVLDEGE---KDRFYLRMDYWHHRIVVHHN------------GQDDLE   66 (302)
T ss_dssp             --CCCEEEEEEEEEECSCHHHHHHHHHHTTCCEEECCSC---SSEEEEESSSBSCSEEEESS------------CCSEEE
T ss_pred             CCcccccEeeEEEEEeCCHHHHHHHHHhcCCCEEEeccC---CcceEEEeCCCceEEEEecC------------CCCCee
Confidence            345789999999999999999999999999999987642   1344543322  22333211            123678


Q ss_pred             EEEEeeC---CHHHHHHHHHhCCCeEEccceecC--ccceEEEEEeCCCCCEEEEEecC
Q 029385           84 HISFQCE---NMAIVERRLKEMKIDYVKSRVEEG--GINVDQLFFHDPDGSMIEICNCD  137 (194)
Q Consensus        84 hiaf~v~---dl~~~~~~l~~~Gi~~~~~~~~~~--g~~~~~~~~~DPDG~~iEi~~~~  137 (194)
                      |++|.|+   |+++++++|++.|+++...+....  ..+.+.+||+|||||.|||++..
T Consensus        67 ~~~~~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  125 (302)
T 2ehz_A           67 YLGWRVAGKPEFEALGQKLIDAGYKIRICDKVEAQERMVLGLMKTEDPGGNPTEIFWGP  125 (302)
T ss_dssp             EEEEEESSHHHHHHHHHHHHHTTCCCEECCHHHHHHHTEEEEEEEECTTSCEEEEEEEE
T ss_pred             EEEEEECCHHHHHHHHHHHHHCCCcEEECCccccccccceEEEEEECCCCCEEEEEECC
Confidence            9999995   799999999999999876543211  12348899999999999999863

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii}

Probab=99.66  E-value=9.3e-16  Score=128.28  Aligned_cols=113  Identities=17%  Similarity=0.313  Sum_probs=87.9

Q ss_pred             CCcccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeCC----cEEEEeecCCCCCCCCCCCCCCCCc
Q 029385            7 NPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYG----MGIHLLKSEEPDNLPKAGKNINPKD   82 (194)
Q Consensus         7 ~~~~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~g----~~~~l~~~~~~~~~~~~~~~~~~g~   82 (194)
                      +++.+++|+||.|.|+|++++.+||+++|||++..+.+    ...++...+    ..+.+...            ..++.
T Consensus         5 ~~~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~----~~~~l~~~~~~~~~~l~l~~~------------~~~g~   68 (339)
T 3lm4_A            5 ARFDIAHLARAELFSPKPQETLDFFTKFLGMYVTHREG----QSVYLRGYEDPYPWSLKITEA------------PEAGM   68 (339)
T ss_dssp             GGGSEEEEEEEEEEESSHHHHHHHHHHTTCCEEEEEET----TEEEEECTTCSSSCSEEEEEC------------SSCEE
T ss_pred             CCCCCcEEEEEEEEeCCHHHHHHHHHhcCCCEEEEecC----CEEEEEecCCCCceEEEEeeC------------CCCCc
Confidence            45689999999999999999999999999999988753    445554432    12222221            13468


Q ss_pred             cEEEEeeCC---HHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEecC
Q 029385           83 NHISFQCEN---MAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD  137 (194)
Q Consensus        83 ~hiaf~v~d---l~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~  137 (194)
                      .|++|.|+|   ++++.++|++.|+++...+.. .+ +.+.++|+|||||.|||+...
T Consensus        69 ~~~af~v~~~~dld~~~~~l~~~G~~~~~~~~~-~~-~~~~~~f~DPdG~~iel~~~~  124 (339)
T 3lm4_A           69 GHAAMRTSSPEALERRAKSLTDGNVDGTWSEDQ-FG-YGKTFEYQSPDGHNLQLLWEA  124 (339)
T ss_dssp             EEEEEEESSHHHHHHHHHHHHHTTCCEEEECCS-TT-BCCEEEEECTTCCEEEEECCB
T ss_pred             ceEEEEeCCHHHHHHHHHHHHHCCCceeeccCC-CC-ceEEEEEECCCCCEEEEEEee
Confidence            899999997   999999999999998876542 22 238999999999999999764

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A

Probab=99.66  E-value=7.4e-16  Score=127.86  Aligned_cols=116  Identities=15%  Similarity=0.125  Sum_probs=88.5

Q ss_pred             CCcccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeCC----cEEEEeecCCCCCCCCCCCCCCCCc
Q 029385            7 NPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYG----MGIHLLKSEEPDNLPKAGKNINPKD   82 (194)
Q Consensus         7 ~~~~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~g----~~~~l~~~~~~~~~~~~~~~~~~g~   82 (194)
                      .++++++|+||.|.|+|++++++||+++|||++..+.+    ...++...+    ..+.+...            ..++.
T Consensus        11 ~~~~i~~l~hv~l~v~Dl~~a~~FY~~vlG~~~~~~~~----~~~~l~~~~~~~~~~l~l~~~------------~~~~~   74 (323)
T 1f1u_A           11 PAPDIVRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDE----NTIYLRSLEEFIHHNLVLRQG------------PIAAV   74 (323)
T ss_dssp             CCCCEEEEEEEEEEESCHHHHHHHHTTTTCCEEEEECS----SEEEEECTTCCSSCSEEEEEC------------SSCEE
T ss_pred             CCcccceeeEEEEEeCCHHHHHHHHHhCCCCEEeeecC----CEEEEEecCCCCcEEEEEEEC------------CCCCe
Confidence            44679999999999999999999999999999988763    345554322    23443321            12367


Q ss_pred             cEEEEee---CCHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEecCC
Q 029385           83 NHISFQC---ENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV  138 (194)
Q Consensus        83 ~hiaf~v---~dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~~  138 (194)
                      .|++|.|   +|+++++++|++.|+++...+......+.+.++|.||||+.|||++...
T Consensus        75 ~~~~f~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~DP~G~~iel~~~~~  133 (323)
T 1f1u_A           75 AAFAYRVKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRVEDPLGFPYEFFYETE  133 (323)
T ss_dssp             EEEEEEESSHHHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECCBC
T ss_pred             eEEEEEeCCHHHHHHHHHHHHhCCCcEEeccccccCCcceEEEEECCCCCEEEEEEecc
Confidence            8999999   6999999999999999887654111122388999999999999998654

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B*

Probab=99.65  E-value=7.3e-16  Score=125.61  Aligned_cols=114  Identities=13%  Similarity=0.179  Sum_probs=84.3

Q ss_pred             cceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeCCcEEEEeecCCCCCCCCCCCCCCCCccEEEEeeC
Q 029385           11 LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQCE   90 (194)
Q Consensus        11 i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~~hiaf~v~   90 (194)
                      +++|+||.|.|+|++++++||+++|||++..+.+    ...++...+..+.+....          ....+..|++|.|+
T Consensus         2 i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~----~~~~l~~~~~~~~l~~~~----------~~~~~~~~~~f~v~   67 (292)
T 1kw3_B            2 IERLGYLGFAVKDVPAWDHFLTKSVGLMAAGSAG----DAALYRADQRAWRIAVQP----------GELDDLAYAGLEVD   67 (292)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET----TEEEEESSSBSCSEEEEE----------CTTCEEEEEEEECS
T ss_pred             ceeEEEEEEEeCCHHHHHHHHHhcCCCEEeecCC----CeEEEEcCCceEEEEEcc----------CCCCCccEEEEEEC
Confidence            6899999999999999999999999999987653    344543332222222111          11246789999998


Q ss_pred             ---CHHHHHHHHHhCCCeEEccceec--CccceEEEEEeCCCCCEEEEEecCC
Q 029385           91 ---NMAIVERRLKEMKIDYVKSRVEE--GGINVDQLFFHDPDGSMIEICNCDV  138 (194)
Q Consensus        91 ---dl~~~~~~l~~~Gi~~~~~~~~~--~g~~~~~~~~~DPDG~~iEi~~~~~  138 (194)
                         |+++++++|+++|+++...+...  ...+.+.+||+|||||.|||++...
T Consensus        68 ~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~  120 (292)
T 1kw3_B           68 DAAALERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQDPFGLPLEIYYGPA  120 (292)
T ss_dssp             SHHHHHHHHHHHHHHTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEECCC
T ss_pred             CHHHHHHHHHHHHHcCCeEeecCcccccccCceEEEEEECCCCCEEEEEECcc
Confidence               99999999999999987655321  0112388999999999999998654

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans}

Probab=99.65  E-value=1.8e-15  Score=124.93  Aligned_cols=115  Identities=22%  Similarity=0.206  Sum_probs=85.5

Q ss_pred             CcccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeCC--cEEEEeecCCCCCCCCCCCCCCCCccEE
Q 029385            8 PLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYG--MGIHLLKSEEPDNLPKAGKNINPKDNHI   85 (194)
Q Consensus         8 ~~~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~g--~~~~l~~~~~~~~~~~~~~~~~~g~~hi   85 (194)
                      +..+.+|+||.|.|+|++++.+||+++|||++..+.+.   ...|+...+  ..+.+...           .  ++..|+
T Consensus       136 ~~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~---~~~fl~~~~~~~~l~l~~~-----------~--~g~~hi  199 (310)
T 3b59_A          136 EGVPVKISHIVLHSPNHQDMVKFFTDVLGFKVSDWLGD---FMCFLRCNSAHHRIAILPG-----------P--PCLNHV  199 (310)
T ss_dssp             CCCCCEEEEEEEEETTHHHHHHHHHHTSCCEEEEEETT---TEEEEESSSBSCSEEEEES-----------S--SEEEEE
T ss_pred             CCcCcEeceEEEecCCHHHHHHHHHhCCCCEEEEeeCC---eEEEEecCCCcceEEEECC-----------C--CceEEE
Confidence            35688999999999999999999999999998876421   234443322  12222220           1  478899


Q ss_pred             EEeeCCHHHH---HHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEecCC
Q 029385           86 SFQCENMAIV---ERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV  138 (194)
Q Consensus        86 af~v~dl~~~---~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~~  138 (194)
                      +|.|+|++++   +++|++.|+++...+........+.+||+|||||.||+++...
T Consensus       200 ~f~v~d~d~~~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~~~  255 (310)
T 3b59_A          200 AYDMLSVDDMMRGAHRLKVKGIDIGWGPGRHTAGNNTFSYFVTPGGFVTEYTSELE  255 (310)
T ss_dssp             EEECSSHHHHHHHHHHHHHTTCCCSEEEEECSTTCCEEEEEECTTSCEEEEEECCC
T ss_pred             EEEcCCHHHHHHHHHHHHHcCCceeecCccccCCCcEEEEEECCCCCEEEEEeCcc
Confidence            9999997777   9999999999876654322122378999999999999998653

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis}

Probab=99.64  E-value=8.2e-15  Score=119.64  Aligned_cols=125  Identities=13%  Similarity=0.091  Sum_probs=88.2

Q ss_pred             cceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCc-ceEEEEeCCcEE-EEeecCCCCCCCCCCCCCCCCccEEEEe
Q 029385           11 LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDF-DGAWLFNYGMGI-HLLKSEEPDNLPKAGKNINPKDNHISFQ   88 (194)
Q Consensus        11 i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~-~~~~~~~~g~~~-~l~~~~~~~~~~~~~~~~~~g~~hiaf~   88 (194)
                      ...+.|+.|.|+|++++++||+++||+++......... ...++...+... .+.....  ..+    ...+...+++|.
T Consensus        30 ~g~~~~v~l~v~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~--~~~----~~~~~~~~~~~~  103 (282)
T 3oxh_A           30 QGTPNWVDLQTTDQSAAKKFYTSLFGWGYDDNPVPGGGGVYSMATLNGEAVAAIAPMPP--GAP----EGMPPIWNTYIA  103 (282)
T ss_dssp             TTSEEEEEEEESCHHHHHHHHHHHHCCEEEEEC-----CCEEEEEETTEEEEEEEECCS--CC-------CCCEEEEEEE
T ss_pred             CCCcEEEEEecCCHHHHHHHHHHhcCcEEeecCCCCCccCEEEEEeCCeeeEeeccCCC--CCC----CCCCCcEEEEEE
Confidence            45799999999999999999999999998876532110 122333333222 2332221  111    223566899999


Q ss_pred             eCCHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEecCCCCcC
Q 029385           89 CENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVV  142 (194)
Q Consensus        89 v~dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~~~p~~  142 (194)
                      |+|+++++++++++|+++..++....+. .+.++|+|||||.|||++......+
T Consensus       104 v~d~d~~~~~l~~~G~~~~~~p~~~~~~-g~~~~~~DP~G~~i~l~~~~~~~~~  156 (282)
T 3oxh_A          104 VDDVDAVVDKVVPGGGQVMMPAFDIGDA-GRMSFITDPTGAAVGLWQANRHIGA  156 (282)
T ss_dssp             CSCHHHHHTTTTTTTCEEEEEEEEETTT-EEEEEEECTTCCEEEEEEESSCCSC
T ss_pred             eCCHHHHHHHHHHCCCEEEECCEecCCC-eEEEEEECCCCCEEEEEEccccCCc
Confidence            9999999999999999998776554433 3899999999999999998765444

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3

Probab=99.64  E-value=3.1e-15  Score=122.68  Aligned_cols=119  Identities=15%  Similarity=0.216  Sum_probs=83.7

Q ss_pred             CcccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCc-ce-EEEEeCC--cEEEEeecCCCCCCCCCCCCCCCC-c
Q 029385            8 PLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDF-DG-AWLFNYG--MGIHLLKSEEPDNLPKAGKNINPK-D   82 (194)
Q Consensus         8 ~~~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~-~~-~~~~~~g--~~~~l~~~~~~~~~~~~~~~~~~g-~   82 (194)
                      .|.+++|+||.|.|+|++++.+||+++|||++..+...... .. .|+...+  ..+.+...            ..++ .
T Consensus       145 ~~~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~------------~~~g~~  212 (307)
T 1mpy_A          145 GMAAVRFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTKAHDVAFIHH------------PEKGRL  212 (307)
T ss_dssp             TTCCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEECTTCCEEEEEEESSSBSCSEEEEEC------------SSSSEE
T ss_pred             CCCcCceeeEEEEcCCHHHHHHHHHHHcCCeeEeeeecCCCcEEEEEEEcCCCceeEEEecC------------CCCCcc
Confidence            46789999999999999999999999999998765321110 11 2322211  12333211            1124 7


Q ss_pred             cEEEEeeC---CHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEecCC
Q 029385           83 NHISFQCE---NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV  138 (194)
Q Consensus        83 ~hiaf~v~---dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~~  138 (194)
                      .|++|.|+   ++++++++|++.|+++..++...+....+.+||+|||||.|||++...
T Consensus       213 ~hi~f~v~d~~dv~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  271 (307)
T 1mpy_A          213 HHVSFHLETWEDLLRAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSGNRNEVFCGGD  271 (307)
T ss_dssp             EEEEEECSCHHHHHHHHHHHHHHTCCEEEEEEECSSTTCEEEEEECTTSCEEEEEECCC
T ss_pred             eEEEEEcCCHHHHHHHHHHHHHCCCceeeCCccCCCCCceEEEEECCCCcEEEEEeccc
Confidence            89999999   567778999999999876654432112378999999999999998654

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans}

Probab=99.64  E-value=3.6e-15  Score=123.12  Aligned_cols=117  Identities=14%  Similarity=0.248  Sum_probs=90.2

Q ss_pred             CcccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeCC----cEEEEeecCCCCCCCCCCCCCCCCcc
Q 029385            8 PLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYG----MGIHLLKSEEPDNLPKAGKNINPKDN   83 (194)
Q Consensus         8 ~~~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~g----~~~~l~~~~~~~~~~~~~~~~~~g~~   83 (194)
                      .|++++|+|+.|.|+|++++.+||+++|||++..+.+    ...++...+    ..+.+....            ..+..
T Consensus         3 ~~~i~~l~~v~l~v~Dl~~a~~FY~~vlG~~~~~~~~----~~~~l~~~~~~~~~~l~l~~~~------------~~~~~   66 (310)
T 3b59_A            3 LSRVTEIRYVGYGVKDFDAEKAFYADVWGLEPVGEDA----NNAWFKAQGADEHHVVQLRRAD------------ENRID   66 (310)
T ss_dssp             CCCEEEEEEEEEEESSHHHHHHHHHHTTCCEEEEECS----SEEEEECTTSCCSCSEEEEECS------------SCEEE
T ss_pred             ceecceeeEEEEecCCHHHHHHHHHhCcCCEEeeecC----CeEEEEECCCCCCEEEEEEECC------------CCCee
Confidence            3679999999999999999999999999999987753    345554444    344444321            24678


Q ss_pred             EEEEee---CCHHHHHHHHHhCCCeEEcccee-cCccceEEEEEeCCCCCEEEEEecCCCC
Q 029385           84 HISFQC---ENMAIVERRLKEMKIDYVKSRVE-EGGINVDQLFFHDPDGSMIEICNCDVLP  140 (194)
Q Consensus        84 hiaf~v---~dl~~~~~~l~~~Gi~~~~~~~~-~~g~~~~~~~~~DPDG~~iEi~~~~~~p  140 (194)
                      |++|.|   +|+++++++|++.|+++...+.. ....+.+.++|.|||||.|||++.....
T Consensus        67 ~~~~~v~~~~dld~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~  127 (310)
T 3b59_A           67 VIALAADSRSDVDALRASVEAAGCKVASEPAVLATPGGGYGFRFFSPDGLLFEVSSDVAKG  127 (310)
T ss_dssp             EEEEEESSHHHHHHHHHHHHHHTCCBCCCSEECCSTTCCEEEEEECTTSCEEEEEECCCCC
T ss_pred             EEEEEeCCHHHHHHHHHHHHhCCCeEeecCccccccCCceEEEEECCCCCEEEEEEccccc
Confidence            999999   68999999999999998776643 1122348899999999999999876543

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A

Probab=99.64  E-value=3.5e-15  Score=123.79  Aligned_cols=118  Identities=23%  Similarity=0.297  Sum_probs=83.9

Q ss_pred             CCcccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCc--ceEEEEeCC--cEEEEeecCCCCCCCCCCCCCCCCc
Q 029385            7 NPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDF--DGAWLFNYG--MGIHLLKSEEPDNLPKAGKNINPKD   82 (194)
Q Consensus         7 ~~~~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~--~~~~~~~~g--~~~~l~~~~~~~~~~~~~~~~~~g~   82 (194)
                      .++.+.+|+|+.|.|+|++++.+|| ++|||++.......+.  ...|+...+  ..+.+..            ...++.
T Consensus       146 ~~~~~~~l~Hv~l~v~D~~~a~~FY-~~LGf~~~~~~~~~~g~~~~~f~~~~~~~~~~~~~~------------~~~~~~  212 (323)
T 1f1u_A          146 SAGELVRLDHFNQVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQTVHDTALTG------------GNGPRM  212 (323)
T ss_dssp             CTTCCCEEEEEEEEESCHHHHHHHH-HHTTCEEEEEEECTTCCEEEEEEESSSSSCSEEEEE------------SSBSEE
T ss_pred             CCCCCceeeeEEEecCCHHHHHHHH-HhCCCeEEEEEEcCCCcEEEEEEEcCCCcccEEEeC------------CCCCCc
Confidence            3467899999999999999999999 9999998765421111  122322211  1222221            112378


Q ss_pred             cEEEEeeCCHHH---HHHHHHhCCC--eEEccceecCccceEEEEEeCCCCCEEEEEecC
Q 029385           83 NHISFQCENMAI---VERRLKEMKI--DYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD  137 (194)
Q Consensus        83 ~hiaf~v~dl~~---~~~~l~~~Gi--~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~  137 (194)
                      +|++|.|+|+++   ++++|+++|+  ++...+..........+||+|||||.||+++..
T Consensus       213 ~Hiaf~v~d~d~v~~~~~~l~~~G~~~~i~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~~  272 (323)
T 1f1u_A          213 HHVAFATHEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDGHRIEIYTQD  272 (323)
T ss_dssp             EEEEEECSSHHHHHHHHHHHHHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEECC
T ss_pred             eEEEEECCCHHHHHHHHHHHHHCCCccccccCCCccCCCCcEEEEEECCCCCEEEEEeCC
Confidence            999999999988   9999999999  887554433322347799999999999999754

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A*

Probab=99.62  E-value=3.8e-15  Score=121.77  Aligned_cols=117  Identities=16%  Similarity=0.102  Sum_probs=82.3

Q ss_pred             ccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCC-----------CcceEEEEeCC--cEEEEeecCCCCCCCCCCC
Q 029385           10 CLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSF-----------DFDGAWLFNYG--MGIHLLKSEEPDNLPKAGK   76 (194)
Q Consensus        10 ~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~-----------~~~~~~~~~~g--~~~~l~~~~~~~~~~~~~~   76 (194)
                      .+++|+||.|.|+|++++++||+++|||++.......           .....|+...+  ..+.+...           
T Consensus       139 ~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~-----------  207 (300)
T 2zyq_A          139 GEQGMGHVVLSTRDDAEALHFYRDVLGFRLRDSMRLPPQMVGRPADGPPAWLRFFGCNPRHHSLAFLPM-----------  207 (300)
T ss_dssp             GGGCSCEEEEECSCHHHHHHHHHTTTCCEEEEEEEECGGGGTCCTTSCCEEEEEEESSSBSCSEEEESS-----------
T ss_pred             CCCccCeEEEEeCCHHHHHHHHHHhcCCEEeeeecccccccccCCCCCceEEEEEEECCCccEEEEecC-----------
Confidence            4678999999999999999999999999986532100           01123332222  12333321           


Q ss_pred             CCCCCccEEEEeeCCHHH---HHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEecC
Q 029385           77 NINPKDNHISFQCENMAI---VERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD  137 (194)
Q Consensus        77 ~~~~g~~hiaf~v~dl~~---~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~  137 (194)
                      ....+..|++|.|+|+++   ++++|+++|+++...+........+.+||+|||||.|||++..
T Consensus       208 ~~~~g~~h~af~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iEl~~~~  271 (300)
T 2zyq_A          208 PTSSGIVHLMVEVEQADDVGLCLDRALRRKVPMSATLGRHVNDLMLSFYMKTPGGFDIEFGCEG  271 (300)
T ss_dssp             CCSSSEEEEEEEBSSHHHHHHHHHHHHHTTCCEEEEEEEESSSCCEEEEEECTTSSEEEEEECC
T ss_pred             CCCCCceEEEEEeCCHHHHHHHHHHHHHCCCceeecccccCCCCeEEEEEECCCCCEEEEEeCC
Confidence            113467899999998665   5999999999988765433222248899999999999999854

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3

Probab=99.62  E-value=1.9e-15  Score=124.02  Aligned_cols=116  Identities=17%  Similarity=0.262  Sum_probs=85.6

Q ss_pred             ccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeCC--cEEEEeecCCCCCCCCCCCCCCCCccEEEE
Q 029385           10 CLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYG--MGIHLLKSEEPDNLPKAGKNINPKDNHISF   87 (194)
Q Consensus        10 ~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~g--~~~~l~~~~~~~~~~~~~~~~~~g~~hiaf   87 (194)
                      .+++|+||.|.|+|++++++||+++|||++..+...   ...++...+  ..+.+....          ...++..|++|
T Consensus         4 ~i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~---~~~~l~~~~~~~~~~l~~~~----------~~~~~~~~~~f   70 (307)
T 1mpy_A            4 GVMRPGHVQLRVLDMSKALEHYVELLGLIEMDRDDQ---GRVYLKAWTEVDKFSLVLRE----------ADEPGMDFMGF   70 (307)
T ss_dssp             SEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEECTT---SCEEEECTTCCBSCSEEEEE----------CSSCEEEEEEE
T ss_pred             ccceeeeEEEEeCCHHHHHHHHHHccCCEEEeecCC---CcEEEEecCCCCceEEEEcc----------CCCCCcceEEE
Confidence            478999999999999999999999999999887531   234443322  223333221          11246789999


Q ss_pred             ee---CCHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEecCC
Q 029385           88 QC---ENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV  138 (194)
Q Consensus        88 ~v---~dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~~  138 (194)
                      .|   +|+++++++|++.|+++...+......+.+.++|+|||||.|||++...
T Consensus        71 ~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~  124 (307)
T 1mpy_A           71 KVVDEDALRQLERDLMAYGCAVEQLPAGELNSCGRRVRFQAPSGHHFELYADKE  124 (307)
T ss_dssp             EESCHHHHHHHHHHHHHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESCBC
T ss_pred             EeCCHHHHHHHHHHHHHcCCceecCCcccCCCceEEEEEECCCCCEEEEEEcch
Confidence            99   7999999999999999876553111123388999999999999998643

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis}

Probab=99.61  E-value=2.4e-14  Score=116.85  Aligned_cols=118  Identities=14%  Similarity=0.122  Sum_probs=84.3

Q ss_pred             cceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeCCcEEEEeecCCCCCCCCCCCCCCCCccEEEEeeC
Q 029385           11 LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQCE   90 (194)
Q Consensus        11 i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~~hiaf~v~   90 (194)
                      ...+.|+.|.|+|++++++||+++||+++.............+...+..+..+. ...   +    ...++..|++|.|+
T Consensus       162 ~~~~~~~~l~v~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~----~~~~~~~~~~~~v~  233 (282)
T 3oxh_A          162 TGTLIWNELLTDKPDLALAFYEAVVGLTHSSMEIAAGQNYRVLKAGDAEVGGCM-EPP---M----PGVPNHWHVYFAVD  233 (282)
T ss_dssp             TTSEEEEEEECSCHHHHHHHHHHHHCCEEEEC-------CEEEEETTEEEEEEE-CCS---S----TTCCSEEEEEEECS
T ss_pred             CCccEEEEEEcCCHHHHHHHHHHHhCCeeeeccCCCCcceEEEEcCCccEeeec-CCC---C----CCCCCeEEEEEEeC
Confidence            467899999999999999999999999988654111111222233333332221 111   1    22346689999999


Q ss_pred             CHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEecC
Q 029385           91 NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD  137 (194)
Q Consensus        91 dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~  137 (194)
                      |+++++++++++|+++..++...+. +.+.+||+|||||.|||++..
T Consensus       234 dvd~~~~~~~~~G~~~~~~p~~~~~-~~~~~~~~DPdGn~~~l~~~~  279 (282)
T 3oxh_A          234 DADATAAKAAAAGGQVIAEPADIPS-VGRFAVLSDPQGAIFSVLKAA  279 (282)
T ss_dssp             CHHHHHHHHHHTTCEEEEEEEEETT-TEEEEEEECTTSCEEEEEEEC
T ss_pred             CHHHHHHHHHHcCCEEecCCeEcCC-CeEEEEEECCCCCEEEEEecC
Confidence            9999999999999999877655443 348999999999999999865

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A

Probab=99.61  E-value=6.8e-15  Score=120.75  Aligned_cols=116  Identities=15%  Similarity=0.138  Sum_probs=80.7

Q ss_pred             ccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCC----C-CcceEEEEeCC--cEEEEeecCCCCCCCCCCCCCCCCc
Q 029385           10 CLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGS----F-DFDGAWLFNYG--MGIHLLKSEEPDNLPKAGKNINPKD   82 (194)
Q Consensus        10 ~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~----~-~~~~~~~~~~g--~~~~l~~~~~~~~~~~~~~~~~~g~   82 (194)
                      .+++|+||.|.|+|++++++|| ++|||++..+...    . .....|+...+  ..+.+...           ....+.
T Consensus       143 ~~~~i~hv~l~v~D~~~s~~FY-~vLG~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~  210 (305)
T 2wl9_A          143 EGQGLGHIIIREDDVEEATRFY-RLLGLEGAVEYKFALPNGAVGTPVFMHCNDRHHSLAFGVG-----------PMDKRI  210 (305)
T ss_dssp             TTTCSCEEEECCSCHHHHHHHH-HHHTCEEEECBCEECTTSCEECCEEEESSSSSCSEEECCS-----------CCSSSE
T ss_pred             CCceeeeEEEECCCHHHHHHHH-HHcCCeeeeeEecccCCCccceEEEEEcCCCceEEEEecC-----------CCCCCc
Confidence            4678999999999999999999 9999998654210    0 11223433222  11222110           112578


Q ss_pred             cEEEEeeCC---HHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEecC
Q 029385           83 NHISFQCEN---MAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD  137 (194)
Q Consensus        83 ~hiaf~v~d---l~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~  137 (194)
                      .|++|.|+|   +++++++|+++|+++...+........+.+||+|||||.|||++..
T Consensus       211 ~hiaf~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~~  268 (305)
T 2wl9_A          211 NHLMIEYTHLDDLGYAHDLVRQQKIDVTLQIGKHSNDEALTFYCANPSGWLWEPGWGS  268 (305)
T ss_dssp             EEEEEEESSHHHHHHHHHHHHHTTCCEEEEEEECTTTCCEEEEEECTTSSEEEEEECC
T ss_pred             eEEEEEcCCHHHHHHHHHHHHHcCCCccccCcccCCCCcEEEEEECCCCCEEEEEeCC
Confidence            899999998   6678889999999988665433222236789999999999999864

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A*

Probab=99.60  E-value=7.6e-15  Score=119.82  Aligned_cols=117  Identities=15%  Similarity=0.170  Sum_probs=82.6

Q ss_pred             ccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCC-----CCcceEEEEeCC--cEEEEeecCCCCCCCCCCCCCCCCc
Q 029385           10 CLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGS-----FDFDGAWLFNYG--MGIHLLKSEEPDNLPKAGKNINPKD   82 (194)
Q Consensus        10 ~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~-----~~~~~~~~~~~g--~~~~l~~~~~~~~~~~~~~~~~~g~   82 (194)
                      .+++|+|+.|.|+|++++.+||+++|||++..+...     ......|+...+  ..+.+...      +     ...+.
T Consensus       139 ~~~~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~------~-----~~~~~  207 (297)
T 1lgt_A          139 GEQGLGHFVRCVPDSDKALAFYTDVLGFQLSDVIDMKMGPDVTVPAYFLHCNERHHTLAIAAF------P-----LPKRI  207 (297)
T ss_dssp             GGGCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSBSCSEEEECC------C-----CSSSE
T ss_pred             CccccceEEEecCCHHHHHHHHHHhcCCeeeeEEeccCCCCccceEEEEEeCCCcceEEEEcC------C-----CCCCc
Confidence            578999999999999999999999999998754210     001123332222  22333321      1     13467


Q ss_pred             cEEEEeeCCHHHHH---HHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEecCC
Q 029385           83 NHISFQCENMAIVE---RRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV  138 (194)
Q Consensus        83 ~hiaf~v~dl~~~~---~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~~  138 (194)
                      .|++|.|+|++++.   ++ +++|+++...+...+....+.+||+|||||.|||++...
T Consensus       208 ~hiaf~v~d~~~~~~~~~~-~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~~  265 (297)
T 1lgt_A          208 HHFMLEVASLDDVGFAFDR-VDADGLITSTLGRHTNDHMVSFYASTPSGVEVEYGWSAR  265 (297)
T ss_dssp             EEEEEEBSCHHHHHHHHHH-HHTTTCEEEEEEEESSSCCEEEEEECTTSCEEEEEECCC
T ss_pred             eEEEEeCCCHHHHHHHHHH-HhCCCcccccCcccCCCCcEEEEEECCCCcEEEEecCCE
Confidence            89999999987776   88 999999887654433222367999999999999998653

>3zi1_A Glyoxalase domain-containing protein 4; isomerase; 1.90A {Homo sapiens}

Probab=99.59  E-value=1.9e-14  Score=120.09  Aligned_cols=118  Identities=18%  Similarity=0.229  Sum_probs=85.5

Q ss_pred             cceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeCCc--EEEEeecCCCCCCCCCCCCCCCCccEEEEe
Q 029385           11 LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGM--GIHLLKSEEPDNLPKAGKNINPKDNHISFQ   88 (194)
Q Consensus        11 i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~g~--~~~l~~~~~~~~~~~~~~~~~~g~~hiaf~   88 (194)
                      ...+.||.|.|+|++++.+||+++|||++..+....  ...|+...+.  .+.+.....    +.   ....+..|++|.
T Consensus       157 ~~~i~hv~L~v~Dl~~a~~FY~~vLG~~~~~~~~~~--~~~~l~~g~~~~~l~l~~~~~----~~---~~~~~~~hiaf~  227 (330)
T 3zi1_A          157 SDPVLKVTLAVSDLQKSLNYWCNLLGMKIYENDEEK--QRALLGYADNQCKLELQGVKG----GV---DHAAAFGRIAFS  227 (330)
T ss_dssp             SCSEEEEEEEESCHHHHHHHHHHTTCCEEEEEETTT--TEEEEESSTTSCEEEEEECSS----CC---CCBTTCCEEEEE
T ss_pred             CCceeEEEEECCCHHHHHHHHHHhcCCEEEeeccCC--cEEEEEeCCceEEEEECCCCC----CC---CCCCCCceEEEE
Confidence            346789999999999999999999999998876422  2345433332  333332221    10   223467799999


Q ss_pred             eC--CHHHHHHHHHhCCCeEEccceec--C-ccceEEEEEeCCCCCEEEEEecC
Q 029385           89 CE--NMAIVERRLKEMKIDYVKSRVEE--G-GINVDQLFFHDPDGSMIEICNCD  137 (194)
Q Consensus        89 v~--dl~~~~~~l~~~Gi~~~~~~~~~--~-g~~~~~~~~~DPDG~~iEi~~~~  137 (194)
                      |+  |+++++++|++.|+++..++...  + ..+.+.+||+|||||.|||++..
T Consensus       228 v~~~dld~~~~rl~~~G~~i~~~~~~~~~pg~~g~~~~~f~DPdG~~iEl~~~~  281 (330)
T 3zi1_A          228 CPQKELPDLEDLMKRENQKILTPLVSLDTPGKATVQVVILADPDGHEICFVGDE  281 (330)
T ss_dssp             ECGGGHHHHHHHHHHTTCEEEEEEEEECCTTSCCEEEEEEECTTCCEEEEEEHH
T ss_pred             EEcccHHHHHHHHHHcCCcEecCceecccCCCCceEEEEEECCCCCEEEEEEec
Confidence            96  89999999999999987665432  1 12348999999999999999864

>3zi1_A Glyoxalase domain-containing protein 4; isomerase; 1.90A {Homo sapiens}

Probab=99.59  E-value=1e-14  Score=121.67  Aligned_cols=130  Identities=12%  Similarity=0.159  Sum_probs=88.9

Q ss_pred             CCcccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCC---------cce---EEEEeCC-----cEEEEeecCCCC
Q 029385            7 NPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFD---------FDG---AWLFNYG-----MGIHLLKSEEPD   69 (194)
Q Consensus         7 ~~~~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~---------~~~---~~~~~~g-----~~~~l~~~~~~~   69 (194)
                      ..|.+++|+||+|.|+|++++++||+++|||++..+....+         +++   .+++..+     ..++|.......
T Consensus        21 ~~M~~~~i~Hv~l~V~Dle~s~~FY~~vLGl~~~~~~~~~~~~~a~~~g~~~~~~~~~~l~~~~~~~~~~leL~~~~~~~  100 (330)
T 3zi1_A           21 QSMAARRALHFVFKVGNRFQTARFYRDVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMVGFGPEDDHFVAELTYNYGVG  100 (330)
T ss_dssp             GGCSCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEEC---------CCCSCEEEEEEESSCTTTCCEEEEEEETTCC
T ss_pred             eecccceeeEEEEEeCCHHHHHHHHHHhcCCeEEEEeecchhhhhhccCCcCCceEEEEEecCCCCCccEEEEeccCCCC
Confidence            45678899999999999999999999999999877643221         011   2223222     346665543221


Q ss_pred             CCCCCCCCCCCCccEEEEeeCCHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEecCCCCcCcCCCcch
Q 029385           70 NLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVVPLAGDAV  149 (194)
Q Consensus        70 ~~~~~~~~~~~g~~hiaf~v~dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~~~p~~p~~~~~~  149 (194)
                        ..   ....+..|++|.|+|+   ++++++.|+++...+   .    ..+||.|||||.|||++.......|+   ..
T Consensus       101 --~~---~~~~g~~hiaf~V~d~---~~~l~~~G~~~~~~~---~----~~~~~~DPdG~~iel~~~~~~~~~~i---~h  162 (330)
T 3zi1_A          101 --DY---KLGNDFMGITLASSQA---VSNARKLEWPLTEVA---E----GVFETEAPGGYKFYLQNRSLPQSDPV---LK  162 (330)
T ss_dssp             --CC---CBCSSEEEEEEECHHH---HHHHHHHTCCCEEEE---T----TEEEEECTTSCEEEEESSCCTTSCSE---EE
T ss_pred             --cc---ccCCCeeEEEEECchH---HHHHHHcCCceeccC---C----ceEEEECCCCCEEEEEecCCCCCCce---eE
Confidence              11   3345889999999987   677888999887543   2    37899999999999999754222222   34


Q ss_pred             hhccc
Q 029385          150 RIRSC  154 (194)
Q Consensus       150 ~~~~~  154 (194)
                      +.+.+
T Consensus       163 v~L~v  167 (330)
T 3zi1_A          163 VTLAV  167 (330)
T ss_dssp             EEEEE
T ss_pred             EEEEC
Confidence            55666

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B*

Probab=99.58  E-value=8.9e-15  Score=119.12  Aligned_cols=117  Identities=15%  Similarity=0.120  Sum_probs=81.0

Q ss_pred             cccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCC--C---cceEEEEeCC--cEEEEeecCCCCCCCCCCCCCCCC
Q 029385            9 LCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSF--D---FDGAWLFNYG--MGIHLLKSEEPDNLPKAGKNINPK   81 (194)
Q Consensus         9 ~~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~--~---~~~~~~~~~g--~~~~l~~~~~~~~~~~~~~~~~~g   81 (194)
                      +.+++|+|+.|.|+|++++++||+++|||++..+....  +   ....|+...+  ..+.+...           ....+
T Consensus       138 ~~~~~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~  206 (292)
T 1kw3_B          138 TGDQGIGHFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNGRHHTIALAAF-----------PIPKR  206 (292)
T ss_dssp             CGGGCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSBSCSEEEECC-----------SCSSS
T ss_pred             cCCcccceEEEecCCHHHHHHHHHhccCCEEeeeeecccCCCccceEEEEEECCCcceEEEecC-----------CCCCc
Confidence            56789999999999999999999999999987542100  0   0122332211  12333321           11356


Q ss_pred             ccEEEEeeCCHHH---HHHHHHhCCCeEEccceecCccceEEEEEeCCCCC-EEEEEecC
Q 029385           82 DNHISFQCENMAI---VERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGS-MIEICNCD  137 (194)
Q Consensus        82 ~~hiaf~v~dl~~---~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~-~iEi~~~~  137 (194)
                      ..|++|.|+|+++   ++++|+ +|+++...+...+....+.+||+||||| .|||++..
T Consensus       207 ~~hiaf~v~d~~~v~~~~~~l~-~G~~~~~~p~~~~~~~~~~~y~~DPdG~~~iEl~~~~  265 (292)
T 1kw3_B          207 IHHFMLQANTIDDVGYAFDRLD-AAGRITSLLGRHTNDQTLSFYADTPSPMIEVEFGWGP  265 (292)
T ss_dssp             EEEEEEEBSSHHHHHHHHHHHH-HTTCBCBCSEEESSSCCEEEEEECSSTTCEEEEEECC
T ss_pred             eEEEEEEcCCHHHHHHHHHHHh-CCCceeecCcccCCCCeEEEEEECCCCCeeEEEEECC
Confidence            7899999997665   677899 9998876654332222377899999999 99999865

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A

Probab=99.56  E-value=1.5e-14  Score=118.57  Aligned_cols=116  Identities=16%  Similarity=0.119  Sum_probs=78.3

Q ss_pred             ccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCC--C---cceEEEEeCC--cEEEEeecCCCCCCCCCCCCCCCCc
Q 029385           10 CLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSF--D---FDGAWLFNYG--MGIHLLKSEEPDNLPKAGKNINPKD   82 (194)
Q Consensus        10 ~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~--~---~~~~~~~~~g--~~~~l~~~~~~~~~~~~~~~~~~g~   82 (194)
                      ..++|+||.|.|+|++++.+|| ++|||++..+....  +   ....|+...+  ..+.+..  .         ....+.
T Consensus       146 ~~~~l~hv~l~v~D~~~a~~FY-~~lG~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~---------~~~~~~  213 (302)
T 2ehz_A          146 GDQGLGHCIVRQTDVAEAHKFY-SLLGFRGDVEYRIPLPNGMTAELSFMHCNARDHSIAFGA--M---------PAAKRL  213 (302)
T ss_dssp             GGGCSCEEEECCSCHHHHHHHH-HHTTCBCCEEEEEECTTSCEEEEEEEBSSSBSCSEEECS--C---------CCSSSE
T ss_pred             CCCccceEEEEcCCHHHHHHHH-HhcCCeeeeEEeccCCCCcceEEEEEEeCCCCcEEEEec--C---------CCCCce
Confidence            3468999999999999999999 99999876432100  0   0122322211  1111111  0         112467


Q ss_pred             cEEEEeeCCHHH---HHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEecC
Q 029385           83 NHISFQCENMAI---VERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD  137 (194)
Q Consensus        83 ~hiaf~v~dl~~---~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~  137 (194)
                      .|++|.|+|+++   ++++|+++|+++..++........+.+||+|||||.|||++..
T Consensus       214 ~hiaf~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iEl~~~~  271 (302)
T 2ehz_A          214 NHLMLEYTHMEDLGYTHQQFVKNEIDIALQLGIHANDKALTFYGATPSGWLIEPGWRG  271 (302)
T ss_dssp             EEEEEEESSHHHHHHHHHHHHHTTCCEEEEEEECTTTCCEEEEEECTTSSEEEEEECC
T ss_pred             eEEEEEcCCHHHHHHHHHHHHHCCCcEEeCCcccCCCCceEEEEECCCCcEEEEEECc
Confidence            899999998665   6779999999988665443222237899999999999999763

>1t47_A 4-hydroxyphenylpyruvate dioxygenase; triketone inhibitor, iron, oxidoreductase; HET: NTD; 2.50A {Streptomyces avermitilis} SCOP: d.32.1.3 d.32.1.3

Probab=99.56  E-value=1.4e-13  Score=116.98  Aligned_cols=129  Identities=9%  Similarity=0.098  Sum_probs=93.1

Q ss_pred             CCcccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCC----CCCcceEEEEe-CCcEEEEeecCCCCCC----CC-CCC
Q 029385            7 NPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPG----SFDFDGAWLFN-YGMGIHLLKSEEPDNL----PK-AGK   76 (194)
Q Consensus         7 ~~~~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~----~~~~~~~~~~~-~g~~~~l~~~~~~~~~----~~-~~~   76 (194)
                      ++|.+++++||.|.|+|++++.+||+++|||+++.+.+    +... ..+++. .+..+.+.....+.+.    .. ...
T Consensus        16 ~~~~i~~i~hV~i~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~-~~~~~~~g~~~l~l~~~~~~~~~~~~~~~~~~~   94 (381)
T 1t47_A           16 DPFPVKGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRET-ASYVLTNGSARFVLTSVIKPATPWGHFLADHVA   94 (381)
T ss_dssp             CCSCCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSE-EEEEEEETTEEEEEEEESSCCSHHHHHHHHHHH
T ss_pred             CCCcCceEEEEEEEECCHHHHHHHHHHcCCCEEEEEEcCCCCCceE-EEEEEecCCEEEEEecCCCCCCcchhHHHHHHH
Confidence            56889999999999999999999999999999987632    1111 233333 3456666654322211    00 000


Q ss_pred             CCCCCccEEEEeeCCHHHHHHHHHhCCCeEEcccee--cCccceEEEEEeCCCCCEEEEEec
Q 029385           77 NINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVE--EGGINVDQLFFHDPDGSMIEICNC  136 (194)
Q Consensus        77 ~~~~g~~hiaf~v~dl~~~~~~l~~~Gi~~~~~~~~--~~g~~~~~~~~~DPDG~~iEi~~~  136 (194)
                      ..+.+..|++|.|+|++++++++++.|+++..++..  ......+..+++||+|+.+++++.
T Consensus        95 ~~g~gv~~iaf~V~D~~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~~pgg~~~~lv~~  156 (381)
T 1t47_A           95 EHGDGVVDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEHGTVVLAAIATYGKTRHTLVDR  156 (381)
T ss_dssp             HHCSEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEE
T ss_pred             hcCCceEEEEEEECCHHHHHHHHHHcCCEEeeccccccCCCCeEEEEEEecCCCcEEEEEec
Confidence            124588999999999999999999999999876643  122234688999999999999985

>2r5v_A PCZA361.1; dioxygenase, non-heme iron, vancomycin, oxidoreductase; HET: HHH; 2.30A {Amycolatopsis orientalis}

Probab=99.52  E-value=5.1e-14  Score=118.30  Aligned_cols=130  Identities=14%  Similarity=0.270  Sum_probs=89.2

Q ss_pred             CCcccceeeeEEEEcC--CHHHHHHHHHHccCCeEeeeCC-CCCc---ceEEEEeC--CcEEEEeecCCCCCCC-C---C
Q 029385            7 NPLCLKSLNHISLVCR--SVEASLDFYQNVLGFFPIRRPG-SFDF---DGAWLFNY--GMGIHLLKSEEPDNLP-K---A   74 (194)
Q Consensus         7 ~~~~i~~i~hv~l~v~--Dle~s~~FY~~vLG~~~~~~~~-~~~~---~~~~~~~~--g~~~~l~~~~~~~~~~-~---~   74 (194)
                      ..+.+++|+||.|.|+  |++++++||+++|||+...+.. ..++   ...|+...  +..+.+.+........ .   .
T Consensus       152 ~~~~~~~l~Hv~l~V~~~D~~~~~~FY~~vLGf~~~~~~~~~~~~~~~~~~~l~~~~g~~~l~l~~~~~~~~~~~~~~~~  231 (357)
T 2r5v_A          152 GDVDLLGIDHFAICLNAGDLGPTVEYYERALGFRQIFDEHIVVGAQAMNSTVVQSASGAVTLTLIEPDRNADPGQIDEFL  231 (357)
T ss_dssp             TTCCCCEEEEEEEECCTTCHHHHHHHHHHHHCCEEEEEEEEEETTEEEEEEEEECTTSCCEEEEEEECTTSBCCHHHHHH
T ss_pred             CCCCcceEeEEEEEEchhhHHHHHHHHHHhcCCcEEEEEeeccCCcceEEEEEECCCCCEEEEEeeecCCCCCchhHHHH
Confidence            3467899999999999  9999999999999999875431 0011   12334332  2467776654211000 0   0


Q ss_pred             CCCCCCCccEEEEeeCCHHHHHHHHHhCCCeEEccceec----------Cc--c----ceEEEEEeCCCCCEEEEEec
Q 029385           75 GKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEE----------GG--I----NVDQLFFHDPDGSMIEICNC  136 (194)
Q Consensus        75 ~~~~~~g~~hiaf~v~dl~~~~~~l~~~Gi~~~~~~~~~----------~g--~----~~~~~~~~DPDG~~iEi~~~  136 (194)
                      .....++..||||.|+|+++++++|+++|+++...+...          .+  +    ....+|++||||++|||++.
T Consensus       232 ~~~~~~g~~Hiaf~v~Di~~~~~~L~~~Gv~~~~~p~~yy~~~~~r~~~~~~~~~~~~~~~~l~~~Dp~G~llqi~t~  309 (357)
T 2r5v_A          232 KDHQGAGVQHIAFNSNDAVRAVKALSERGVEFLKTPGAYYDLLGERITLQTHSLDDLRATNVLADEDHGGQLFQIFTA  309 (357)
T ss_dssp             HHHTSSEEEEEEEECSCHHHHHHHHHHTTCCBCCCCHHHHHTTTTTCCCSSSCHHHHHHHTCEEEEETTEEEEEEEBC
T ss_pred             HhcCCCCccEEEEEcCCHHHHHHHHHHcCCCcCCCchhHHHHHHHhhccchhhHHHHHHcCeEEecCCCceEEEEEcc
Confidence            001246889999999999999999999999987664210          00  0    01379999999999999985

>1xy7_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G48480, reductively methylated protein, CATH 3.10.180 fold; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.9 PDB: 2q48_A

Probab=99.51  E-value=5.9e-13  Score=100.54  Aligned_cols=122  Identities=9%  Similarity=0.013  Sum_probs=77.6

Q ss_pred             ccceeeeEEEEcCC--HHHHHHHHHHccCCeEeeeC-------CC--CCcceEEEEeCCcEEEEeecCCCCCCCCCCCCC
Q 029385           10 CLKSLNHISLVCRS--VEASLDFYQNVLGFFPIRRP-------GS--FDFDGAWLFNYGMGIHLLKSEEPDNLPKAGKNI   78 (194)
Q Consensus        10 ~i~~i~hv~l~v~D--le~s~~FY~~vLG~~~~~~~-------~~--~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~   78 (194)
                      ..+.+ ++.|.|+|  ++++++||+++||+++....       ..  .......+...+..+.+.... +..  ......
T Consensus        22 ~~~~i-~~~L~v~D~~~~~A~~FY~~vfG~~~~~~~~~~~~~~~~~~~~~~~a~l~~~g~~l~l~~~~-~~~--~~~~~~   97 (166)
T 1xy7_A           22 VFTEF-KQMLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLAGSSFVVCDVS-SLP--GFSTAK   97 (166)
T ss_dssp             CEEEE-EEEEEECTTCHHHHHHHHHHHHCCEEC---------------CCCEEEEEETTEEEEEEEGG-GST--TCCCCC
T ss_pred             CCceE-EEEEEECCcCHHHHHHHHHHHhCCEEEEEEccCCCCCCCCCCcEEEEEEEECCeEEEEeCCC-ccc--CCcccc
Confidence            44444 89999999  99999999999999987543       10  001111122234344443221 110  000011


Q ss_pred             C-CCccEEEEeeCCHHHHHHHHHhCCCeEEccceecC-ccceEEEEEeCCCCCEEEEEecC
Q 029385           79 N-PKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEG-GINVDQLFFHDPDGSMIEICNCD  137 (194)
Q Consensus        79 ~-~g~~hiaf~v~dl~~~~~~l~~~Gi~~~~~~~~~~-g~~~~~~~~~DPDG~~iEi~~~~  137 (194)
                      + ....|++|.|+|+++++++|+++|++ ..++.... .+ .+.++|+||+||.|+|++..
T Consensus        98 ~~~~g~~l~~~vdDvda~~~~l~~~G~~-~~~~~~~~~~~-~r~~~v~DP~G~~~~l~~~~  156 (166)
T 1xy7_A           98 SEGSGVTFLLGTKDAEAAVAKAVDAGAV-KVEVTEAEVEL-GFKGKVTDPFGVTWIFAEKK  156 (166)
T ss_dssp             TTSCCCEEEEECSCHHHHHHHHHHTTCE-ECCCCHHHHHT-TEEEEEECTTSCEEEEEC--
T ss_pred             CCCCcEEEEEEcCCHHHHHHHHHHCCCE-ECCcccccCcc-cEEEEEECCCCCEEEEEeec
Confidence            0 23359999999999999999999999 77664430 23 48999999999999999753

>2r5v_A PCZA361.1; dioxygenase, non-heme iron, vancomycin, oxidoreductase; HET: HHH; 2.30A {Amycolatopsis orientalis}

Probab=99.46  E-value=2.5e-13  Score=114.06  Aligned_cols=128  Identities=9%  Similarity=0.025  Sum_probs=89.4

Q ss_pred             cccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEe-CCcEEEEeecCCCCCCCCC-CCCCCCCccEEE
Q 029385            9 LCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFN-YGMGIHLLKSEEPDNLPKA-GKNINPKDNHIS   86 (194)
Q Consensus         9 ~~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~-~g~~~~l~~~~~~~~~~~~-~~~~~~g~~hia   86 (194)
                      |.+++++||.|.|+|++++.+||+++|||+.+.+....+. ..+++. .+..+.+.....+...... ......+..|++
T Consensus         1 ~~i~~l~hv~~~v~D~~~a~~fy~~~LGf~~~~~~~~~~g-~~~~~~~g~~~l~l~~~~~~~~~~~~~~~~~g~g~~~ia   79 (357)
T 2r5v_A            1 MQNFEIDYVEMYVENLEVAAFSWVDKYAFAVAGTSRSADH-RSIALRQGQVTLVLTEPTSDRHPAAAYLQTHGDGVADIA   79 (357)
T ss_dssp             -CCCEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTE-EEEEEEETTEEEEEEEESSTTSHHHHHHHHHSSEEEEEE
T ss_pred             CCCceEEEEEEEECCHHHHHHHHHHcCCCeEEEEEcCCCc-eEEEEEeCCEEEEEeCCCCCCCHHHHHHHhcCCeEEEEE
Confidence            5689999999999999999999999999999876532111 233333 3445555542222110000 001245889999


Q ss_pred             EeeCCHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEecC
Q 029385           87 FQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD  137 (194)
Q Consensus        87 f~v~dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~  137 (194)
                      |.|+|++++++++++.|+++...+.+......+...+.||+|..+++++..
T Consensus        80 f~V~D~~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~~p~g~~~~lv~~~  130 (357)
T 2r5v_A           80 MATSDVAAAYEAAVRAGAEAVRAPGQHSEAAVTTATIGGFGDVVHTLIQRD  130 (357)
T ss_dssp             EEESCHHHHHHHHHHTTCCEEEEEECCC-CCCCEEEEECSTTCEEEEEECC
T ss_pred             EEECCHHHHHHHHHHcCCeEeECcEecCCCeEEEEEEeccCCeEEEEEecc
Confidence            999999999999999999988765432212236789999999999999863

>2zw5_A Bleomycin acetyltransferase; dimer, two domains; HET: COA; 2.40A {Streptomyces verticillus} PDB: 2zw4_A* 2zw6_A 2zw7_A*

Probab=99.45  E-value=2.1e-12  Score=104.66  Aligned_cols=109  Identities=13%  Similarity=0.094  Sum_probs=77.1

Q ss_pred             eeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEE-EEeCC-----cEEEEeecCCCCCCCCCCCCCCCCccEEEEe
Q 029385           15 NHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAW-LFNYG-----MGIHLLKSEEPDNLPKAGKNINPKDNHISFQ   88 (194)
Q Consensus        15 ~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~-~~~~g-----~~~~l~~~~~~~~~~~~~~~~~~g~~hiaf~   88 (194)
                      .++.+.|.|++++.+||+++||+++..+...   .+.+ .+..+     ....+....  .       .......+++|.
T Consensus       185 ~~~~l~v~D~~~a~~FY~~~lG~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~--~-------~~~~~~~~~~~~  252 (301)
T 2zw5_A          185 VITELPVRDVAATLRLVEAALGARTAFAIGD---PPEFAEAALTPWSAGPRFRLAAVP--G-------PGPVEPVRLHLD  252 (301)
T ss_dssp             EEEEEEESCHHHHHHHHHHHSCCEEEEEEET---TEEEEEEESSSSSSSSEEEEEECC--C-------SSCCCCCEEEEE
T ss_pred             eEEEEEeCCHHHHHHHHHHhcCCeEeeecCC---CccEEEEEcCCCccccccccccCC--C-------cCCCCceEEEEE
Confidence            4889999999999999999999998744321   1122 22222     222221110  0       112234689999


Q ss_pred             eC-CHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEec
Q 029385           89 CE-NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC  136 (194)
Q Consensus        89 v~-dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~  136 (194)
                      |+ |++++++++.++|+++..++...+ ++.+.++|+|||||.|||++.
T Consensus       253 v~~dvd~~~~~~~~~G~~~~~~~~~~~-~g~~~~~~~DPdG~~~~~~~~  300 (301)
T 2zw5_A          253 AAGTADSLHRRAVDAGARVDGPPVRRP-WGRSEFVITLPEGHELTVSAP  300 (301)
T ss_dssp             EESCHHHHHHHHHHTTCCEEEEEEECT-TSCEEEEEECTTSCEEEEEEC
T ss_pred             cCccHHHHHHHHHHcCCccccCcccCC-CcceEEEEECCCCCEEEeeCC
Confidence            99 999999999999999987765443 445899999999999999873

>4ghg_A Homoprotocatechuate 2,3-dioxygenase; oxygen activation, Fe(II), 2-His-1-carboxylate triad, 4-nitrocatechol, OXY complex, oxidoreductase; HET: P6G PG4 DHY; 1.50A {Brevibacterium fuscum} PDB: 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* 3ojn_A* 4ghh_A* 4ghc_A 4ghd_A* 4ghe_A* 4ghf_A* 3eck_A* 3ecj_A*

Probab=99.44  E-value=1.5e-12  Score=110.23  Aligned_cols=121  Identities=21%  Similarity=0.277  Sum_probs=79.5

Q ss_pred             CcccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCc--ceEEEEeCCcEEEEeecCCCCCCCCCCCCCCCCccEE
Q 029385            8 PLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDF--DGAWLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHI   85 (194)
Q Consensus         8 ~~~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~--~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~~hi   85 (194)
                      ...+.+|+||.|.|+|++++.+||++ |||++.......+.  ...|+...+....+....          ...++++|+
T Consensus       147 ~~~~~rlgHV~L~v~D~~~t~~Fy~~-LGf~~sd~~~~~~g~~~~~f~~~~~~hH~la~~~----------~~~~~lhHv  215 (365)
T 4ghg_A          147 AGELVRLDHFNQVTPDVPRGRKYLED-LGFRVTEDIQDDEGTTYAAWMHRKGTVHDTALTG----------GNGPRLHHV  215 (365)
T ss_dssp             TTCCCEEEEEEEEESCHHHHHHHHHH-TTCEEEEEEECTTSCEEEEEEESSSSSCSEEEEE----------SSBSEEEEE
T ss_pred             cccCcceeEEEEeecCHHHHHHHHHh-cCCEEEEEEecCCCceeEEeeecCCcccceeeec----------CCCCceeEE
Confidence            35678999999999999999999976 99988765432111  123332222111111111          223579999


Q ss_pred             EEeeCCHHH---HHHHHHhCCCe--EEccceecCccceEEEEEeCCCCCEEEEEecCCC
Q 029385           86 SFQCENMAI---VERRLKEMKID--YVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVL  139 (194)
Q Consensus        86 af~v~dl~~---~~~~l~~~Gi~--~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~~~  139 (194)
                      +|+|+|+++   +.++|++.|+.  +...+....-.....+||+||+||+||+++....
T Consensus       216 af~v~d~d~v~~~~d~l~~~g~~~~i~~GpgRH~~~~~~f~Y~~dP~G~~iE~~t~g~~  274 (365)
T 4ghg_A          216 AFSTHEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDNHRIEIYTQDYY  274 (365)
T ss_dssp             EEECSSHHHHHHHHHHHHHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEECCCC
T ss_pred             EEecCCHHHHHHHHHHHHhCCCCceeEeCCCccCCCCcEEEEEECCCCceEEEEcCCcC
Confidence            999997655   56788889885  3433332221223679999999999999987543

>1sqd_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.3 d.32.1.3 PDB: 1tfz_A* 1tg5_A* 1sp9_A

Probab=99.40  E-value=5.5e-12  Score=108.68  Aligned_cols=131  Identities=8%  Similarity=0.015  Sum_probs=90.1

Q ss_pred             CCCcccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCC----CCcceEEEEeCCcEEEEeecCCCCC-----------
Q 029385            6 ENPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGS----FDFDGAWLFNYGMGIHLLKSEEPDN-----------   70 (194)
Q Consensus         6 ~~~~~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~----~~~~~~~~~~~g~~~~l~~~~~~~~-----------   70 (194)
                      ...|.+++++||.|.|+|++++++||+++|||+++.+.+.    -.....++...+..+.|.....+..           
T Consensus        18 ~~~~~i~~i~HV~i~V~Dle~a~~FY~~~LGf~~v~~~~~~~g~~~~~~~~l~~g~~~l~L~~~~~~~~~~~~~~~~~~~   97 (424)
T 1sqd_A           18 SDKFKVKRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGDLRFLFTAPYSPSLSAGEIKPTTTA   97 (424)
T ss_dssp             CCSSCEEEEEEEEEECSCHHHHHHHHHHHHTCEEEEEESGGGTCSSEEEEEEEETTEEEEEEEECCGGGTTTCCGGGCCC
T ss_pred             CccccCCeEEEEEEEECCHHHHHHHHHHcCCCEEEEEEcCCCCceeEEEEEEcCCCEEEEEecCCCCccccccccccccc
Confidence            3357899999999999999999999999999998876421    1112222333445667766532211           


Q ss_pred             -CCCCC--------CCCCCCccEEEEeeCCHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEecC
Q 029385           71 -LPKAG--------KNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD  137 (194)
Q Consensus        71 -~~~~~--------~~~~~g~~hiaf~v~dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~  137 (194)
                       .+..+        ...+.+..||||.|+|++++++++++.|+++..++....+ ..+...+++|+|..+++++..
T Consensus        98 p~~~~~~~~~~~~~~~~g~gv~~iAf~VdDvdaa~~~l~a~Ga~~~~~P~~~~~-~~~~~~i~~~Gg~~~~lvd~~  172 (424)
T 1sqd_A           98 SIPSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGAIPSSPPIVLNE-AVTIAEVKLYGDVVLRYVSYK  172 (424)
T ss_dssp             SSTTCCHHHHHHHHHHHCSEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEEETT-TEEEEEEEEETTEEEEEEEEC
T ss_pred             ccccccchHHHHHHHhcCCeEEEEEEEeCCHHHHHHHHHHcCCEEeecCcCCCC-ceEEEEEEcCCCcEEEEEecC
Confidence             00000        0123689999999999999999999999998877644322 235566677777777777654

>1u6l_A Hypothetical protein; structural genomics, PSI, protein STRU initiative, NEW YORK SGX research center for structural GEN nysgxrc; 2.81A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=99.33  E-value=1.3e-10  Score=85.89  Aligned_cols=113  Identities=12%  Similarity=-0.071  Sum_probs=74.7

Q ss_pred             eEEEEcC-CHHHHHHHHHHccCCeEeeeCC--CC--------C--cceEE--EEeCCcEEEEeecCCCCCCCCCCCCCCC
Q 029385           16 HISLVCR-SVEASLDFYQNVLGFFPIRRPG--SF--------D--FDGAW--LFNYGMGIHLLKSEEPDNLPKAGKNINP   80 (194)
Q Consensus        16 hv~l~v~-Dle~s~~FY~~vLG~~~~~~~~--~~--------~--~~~~~--~~~~g~~~~l~~~~~~~~~~~~~~~~~~   80 (194)
                      +..|.|. |++++++||+++||+++.....  ..        +  ....+  +...+..+.+.. ..+..  ..  ....
T Consensus         6 ~p~L~v~~d~~~A~~FY~~vfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~l~~~~~~l~~~d-~~~~~--~~--~~~~   80 (149)
T 1u6l_A            6 VPYLIFNGNCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPADWKDKIMHARLVVGSFALMASD-NHPAY--PY--EGIK   80 (149)
T ss_dssp             EEEEEESSCHHHHHHHHHHHHCSEEEEEEESTTTTC----CCSSCCCEEEEEEEETTEEEEEEE-CCTTS--CC--CCCC
T ss_pred             EEEEEECCCHHHHHHHHHHHhCCEEEEEEEcccCCcccCCCcccCCcEEEEEEEECCEEEEEEc-CCCcc--CC--CCCC
Confidence            4888998 9999999999999999875410  00        0  11111  222333333332 11110  01  1122


Q ss_pred             CccEEEEeeCC---HHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEec
Q 029385           81 KDNHISFQCEN---MAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC  136 (194)
Q Consensus        81 g~~hiaf~v~d---l~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~  136 (194)
                      + .+++|.|+|   +++++++|+ .|.++..++.+.. ++.+..+++||+|+.|+|.+.
T Consensus        81 g-~~l~~~v~d~~evd~~~~~l~-~Gg~i~~p~~~~~-wG~r~~~v~Dp~G~~w~l~~~  136 (149)
T 1u6l_A           81 G-CSISLNVDSKAEAERLFNALA-EGGSVQMPLGPTF-WAASFGMFTDRFGVAWMVNCE  136 (149)
T ss_dssp             S-EEEEEECSSHHHHHHHHHHHH-TTSEEEEEEEEET-TEEEEEEEECTTSCEEEEEES
T ss_pred             c-eEEEEEcCCHHHHHHHHHHHH-CCCEEeecccccC-cccceEEEECCCCCEEEEEEe
Confidence            3 589999998   889999986 7888887765433 556889999999999999974

>1u7i_A Hypothetical protein; structural genomics, PA1358, PSI, PROT structure initiative; HET: MSE; 1.40A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=99.31  E-value=2e-10  Score=83.45  Aligned_cols=114  Identities=13%  Similarity=0.097  Sum_probs=75.5

Q ss_pred             eeeeEEEEcC--CHHHHHHHHHHcc-CCeEee--eCCCC----CcceEE--EEeCCcEEEEeecCCCCCCCCCCCCCCCC
Q 029385           13 SLNHISLVCR--SVEASLDFYQNVL-GFFPIR--RPGSF----DFDGAW--LFNYGMGIHLLKSEEPDNLPKAGKNINPK   81 (194)
Q Consensus        13 ~i~hv~l~v~--Dle~s~~FY~~vL-G~~~~~--~~~~~----~~~~~~--~~~~g~~~~l~~~~~~~~~~~~~~~~~~g   81 (194)
                      ++. +.|.+.  |++++++||+++| |+++..  +.+..    +....+  +...+..+.+......   +..  . ...
T Consensus         6 ~i~-~~L~v~~~d~~~A~~FY~~~f~G~~~~~~~~~~~~~~~~~~~~~~a~~~~~g~~~~~~~~~~~---~~~--~-~~~   78 (136)
T 1u7i_A            6 RVR-PFLMFQGVQAEAAMNFYLSLFDDAEILQIQRYGAEGPGPEGSVLKALFRLGDQSVHCIDSHVR---HAF--D-FTP   78 (136)
T ss_dssp             EEE-EEEEEESSCHHHHHHHHHHHCSSEEEEEEEECCTTCSSCTTSEEEEEEEETTEEEEEEEESSC---CSC--C-CCT
T ss_pred             cce-EEEEECCCCHHHHHHHHHHHcCCCEeeEEEEcccCCCCCCCcEEEEEEEECCEEEEEECCCCC---CCC--C-CCC
Confidence            453 778886  9999999999999 999874  22110    011112  2223433333322110   110  1 123


Q ss_pred             ccEEEEeeCC---HHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEe
Q 029385           82 DNHISFQCEN---MAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICN  135 (194)
Q Consensus        82 ~~hiaf~v~d---l~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~  135 (194)
                      ...++|.|+|   +++++++|. .|.++..++.+. .++.+..+++||+|+.|+|..
T Consensus        79 ~~~l~~~v~d~~evd~~~~~l~-~Gg~v~~p~~~~-~~G~~~~~~~Dp~G~~w~l~~  133 (136)
T 1u7i_A           79 AFSFFVDCESNAQIERLAEALS-DGGKALMPLGDY-GFSQRFAWLADRFGVSWQLNL  133 (136)
T ss_dssp             TEEEEEECCCHHHHHHHHHHHH-TTSEEEEEEECC-SSSSEEEEEECTTSCEEEEEE
T ss_pred             ceEEEEEcCCHHHHHHHHHHHH-cCCEEecccccC-CCcceEEEEECCCCCEEEEEe
Confidence            4579999999   999999999 999988776543 345588899999999999986

>1sp8_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 2.00A {Zea mays} SCOP: d.32.1.3 d.32.1.3

Probab=99.30  E-value=5.7e-12  Score=108.39  Aligned_cols=131  Identities=8%  Similarity=0.026  Sum_probs=89.1

Q ss_pred             CCCcccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCC---CcceEEEEeC-CcEEEEeecCCCCC----CCCC---
Q 029385            6 ENPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSF---DFDGAWLFNY-GMGIHLLKSEEPDN----LPKA---   74 (194)
Q Consensus         6 ~~~~~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~---~~~~~~~~~~-g~~~~l~~~~~~~~----~~~~---   74 (194)
                      ..+|.+++++||.|.|+|++++.+||++.|||+++.+.+..   .....+++.. +..+.|.....+..    .+..   
T Consensus        24 ~~~~~i~~l~hV~i~V~Dle~a~~fY~~~LGf~~~~~~~~~~G~~~~~~~~~~~G~~~l~L~~~~~~~~~~~~~p~~~~~  103 (418)
T 1sp8_A           24 SDRFHTLAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGSLSFLFTAPYAHGADAATAALPSFS  103 (418)
T ss_dssp             CCSSCEEEEEEEEEECSCHHHHHHHHHHHHTCCEEEEESGGGTCCSEEEEEEEETTEEEEEEEECCSSCCGGGCSSTTCC
T ss_pred             CccccCceEEEEEEEeCCHHHHHHHHHHhCCCEEEEEEcCCCCCcceEEEEEeeCCEEEEEecCCCCccccccccccccc
Confidence            34578999999999999999999999999999988764211   0123334443 45666665533211    0000   


Q ss_pred             -C------CCCCCCccEEEEeeCCHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEecC
Q 029385           75 -G------KNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD  137 (194)
Q Consensus        75 -~------~~~~~g~~hiaf~v~dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~  137 (194)
                       .      ...+++..||+|.|+|++++++++++.|+++...+....+ ..+...+++|+|..+++++..
T Consensus       104 ~~~~~~~~~~hg~gv~~iAf~V~Dv~~a~~~l~~~Ga~~~~~p~~~~~-~~~~~~i~~~Gg~~~~lvd~~  172 (418)
T 1sp8_A          104 AAAARRFAADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPVDLGR-GFRLAEVELYGDVVLRYVSYP  172 (418)
T ss_dssp             HHHHHHHHHHHSSEEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEEET-TEEEEEEEEETTEEEEEEECC
T ss_pred             chhHHHHHhhcCCeeEEEEEEeCCHHHHHHHHHHCCCEEEeccccccC-ceEEEEEecCCCEEEEEEccC
Confidence             0      0123689999999999999999999999998876643211 124455667777777777654

>1t47_A 4-hydroxyphenylpyruvate dioxygenase; triketone inhibitor, iron, oxidoreductase; HET: NTD; 2.50A {Streptomyces avermitilis} SCOP: d.32.1.3 d.32.1.3

Probab=99.29  E-value=1.4e-11  Score=104.63  Aligned_cols=131  Identities=11%  Similarity=0.172  Sum_probs=88.5

Q ss_pred             CCcccceeeeEEEEcC--CHHHHHHHHHHccCCeEeeeCC----CCCc---ceEEEEeC--CcEEEEeecCCCCCCCCC-
Q 029385            7 NPLCLKSLNHISLVCR--SVEASLDFYQNVLGFFPIRRPG----SFDF---DGAWLFNY--GMGIHLLKSEEPDNLPKA-   74 (194)
Q Consensus         7 ~~~~i~~i~hv~l~v~--Dle~s~~FY~~vLG~~~~~~~~----~~~~---~~~~~~~~--g~~~~l~~~~~~~~~~~~-   74 (194)
                      ....+++|+||++.|+  |++++.+||+++|||+...+.+    ..+.   ...++...  ...+.+.+.......... 
T Consensus       178 ~~~~~~~idHv~l~V~~~dl~~a~~FY~~vLGf~~~~~~~~~~i~~~~~~~~~~~l~~~~g~v~i~l~~~~~~~~~s~~~  257 (381)
T 1t47_A          178 AHRTFQAIDHCVGNVELGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADGTLKVKFPINEPALAKKKSQID  257 (381)
T ss_dssp             SSCSCCEEEEEEEECCTTCHHHHHHHHHHHHCCEECSCCBCHHHHTTTTSEEEEEEECTTSCSEEEEEEECCSSSCCHHH
T ss_pred             CCCCceEEeEEEEeeccccHHHHHHHHHHhhCCEEeeecCcceeccCCccEEEEEEECCCCcEEEEEecCCcCCCccHHH
Confidence            3357899999999999  9999999999999999876632    0111   12222222  245666655421110000 


Q ss_pred             ---CCCCCCCccEEEEeeCCHHHHHHHHHhCCCeEEccceecCc-c---------------ceEEEEEeCCCCCEEEEEe
Q 029385           75 ---GKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGG-I---------------NVDQLFFHDPDGSMIEICN  135 (194)
Q Consensus        75 ---~~~~~~g~~hiaf~v~dl~~~~~~l~~~Gi~~~~~~~~~~g-~---------------~~~~~~~~DPDG~~iEi~~  135 (194)
                         .....+|++||||.|+|+++++++|+++|+++...+..... .               ....++-+||+|.+++|++
T Consensus       258 ~~l~~~~g~Gv~HiAf~vdDi~~~~~~L~~~Gv~~~~~p~~Yy~~l~~R~~~~~~~~~~l~~~~il~d~d~~g~llqift  337 (381)
T 1t47_A          258 EYLEFYGGAGVQHIALNTGDIVETVRTMRAAGVQFLDTPDSYYDTLGEWVGDTRVPVDTLRELKILADRDEDGYLLQIFT  337 (381)
T ss_dssp             HHHHHHTSCEEEEEEEECSCHHHHHHHHHHTTCCBCCCCGGGTTSHHHHHCCCSSCHHHHHHHTCEEEECSSCEEEEEEB
T ss_pred             HHHHHhCCCCcceEEEecCCHHHHHHHHHHcCCccCCCCccHHHHHHHhccccchhHHHHHHhCeEEeeCCCCeEEEEec
Confidence               00134688999999999999999999999998776532111 0               0125788999999999997


Q ss_pred             cC
Q 029385          136 CD  137 (194)
Q Consensus       136 ~~  137 (194)
                      .+
T Consensus       338 ~~  339 (381)
T 1t47_A          338 KP  339 (381)
T ss_dssp             CC
T ss_pred             cC
Confidence            54

>3e0r_A C3-degrading proteinase (CPPA protein); MCSG, PSI, SAD, structural GE protein structure initiative; 2.30A {Streptococcus pneumoniae}

Probab=99.29  E-value=9.4e-11  Score=93.08  Aligned_cols=116  Identities=16%  Similarity=0.091  Sum_probs=75.3

Q ss_pred             eeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeCCcEEEEeecCCCCCCCCCCCCCCCCccEE---EEeeCC
Q 029385           15 NHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHI---SFQCEN   91 (194)
Q Consensus        15 ~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~~hi---af~v~d   91 (194)
                      -++.|.|+|++++.+||+++|||++..+..    ..+++-..+....++..+.|....    ....|..|+   ++.|++
T Consensus        12 ~~p~LrV~nr~~~~~FY~~vlG~kll~ee~----~~a~lg~~~~~~~L~lEEsp~~~~----~~~~Glkh~a~i~i~vp~   83 (244)
T 3e0r_A           12 IIPTLKANNRKLNETFYIETLGMKALLEES----AFLSLGDQTGLEKLVLEEAPSMRT----RKVEGRKKLARLIVKVEN   83 (244)
T ss_dssp             EEEEEEESSHHHHHHHHTTTTCCEEEEECS----SEEEEECTTCCEEEEEEECCTTTC----BCCCSSCSEEEEEEEESS
T ss_pred             EeeEEEECCHHHHHHHHHhccCcEEeeccC----cEEEeecCCCcceEEEEeCCCccc----ccccccceeeeEEEEcCC
Confidence            378999999999999999999999999875    334433333222232222222211    223466666   699998


Q ss_pred             HHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEecCCCCcC
Q 029385           92 MAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVV  142 (194)
Q Consensus        92 l~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~~~p~~  142 (194)
                      -.++..-|+. +..+........|   +++|+.||+||.|||+..++...|
T Consensus        84 ~~el~~lL~~-~~~~~~~~~gdhg---yA~yl~dPEGn~ieiyae~d~~~l  130 (244)
T 3e0r_A           84 PLEIEGILSK-TDSIHRLYKGQNG---YAFEIFSPEDDLILIHAEDDIASL  130 (244)
T ss_dssp             HHHHHHHHTT-CSCCSEEEECSSS---EEEEEECTTCCEEEEECCSCGGGC
T ss_pred             HHHHHHHHhc-ccccccccccCCc---EEEEEECCCCCeEEEEEcCCHHHh
Confidence            7777776665 4433211111122   589999999999999987765554

>1cjx_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase, iron; 2.40A {Pseudomonas fluorescens} SCOP: d.32.1.3 d.32.1.3

Probab=99.28  E-value=3.2e-12  Score=107.57  Aligned_cols=123  Identities=14%  Similarity=0.242  Sum_probs=86.6

Q ss_pred             CCcccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeCC-cEEEEeecCCCCCCCC-CCCCCCCCccE
Q 029385            7 NPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYG-MGIHLLKSEEPDNLPK-AGKNINPKDNH   84 (194)
Q Consensus         7 ~~~~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~g-~~~~l~~~~~~~~~~~-~~~~~~~g~~h   84 (194)
                      +||.+++++||.+.|+|++++.+|| ++|||+++.+...   ...+++..+ ..+.+..  .+.+... .....+.+..|
T Consensus         6 ~~~~i~~l~hV~~~V~D~~~~~~fy-~~LGf~~~~~~~~---~~~~l~~~g~~~l~l~~--~~~~~~~~~~~~~g~gv~~   79 (357)
T 1cjx_A            6 NPMGLMGFEFIEFASPTPGTLEPIF-EIMGFTKVATHRS---KNVHLYRQGEINLILNN--EPNSIASYFAAEHGPSVCG   79 (357)
T ss_dssp             CTTCEEEEEEEEEECSSTTSSHHHH-HHTTCEEEEEESS---SSEEEEEETTEEEEEEC--CSSSHHHHHHHHHSSEEEE
T ss_pred             CCcccceEEEEEEEeCCHHHHHHHH-HHCCCEEEEEeCC---eeEEEEecCCEEEEEEC--CCCchhhhhhhhcCCeEEE
Confidence            6789999999999999999999999 7999999876532   223444444 3333332  2221100 00022368999


Q ss_pred             EEEeeCCHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEecC
Q 029385           85 ISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD  137 (194)
Q Consensus        85 iaf~v~dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~  137 (194)
                      ++|.|+|++++++++++.|+++...+.. .| ......+++|+|..+++++..
T Consensus        80 iaf~V~D~~~~~~~l~~~G~~~~~~~~~-~g-~~~~~~~~~~gg~~~~~vd~~  130 (357)
T 1cjx_A           80 MAFRVKDSQKAYNRALELGAQPIHIDTG-PM-ELNLPAIKGIGGAPLYLIDRF  130 (357)
T ss_dssp             EEEEESCHHHHHHHHHHTTCCBCCCCCC-TT-CBCCCEEECGGGCEEEEECCC
T ss_pred             EEEEeCCHHHHHHHHHHcCCEEeecCCC-CC-cEEEEeeeCCCCeEEEEECCC
Confidence            9999999999999999999998765522 22 124567888888888888654

>3isq_A 4-hydroxyphenylpyruvate dioxygenase; tyrosine metabolism, DIS mutation, iron, mental retardation, metal-binding, oxidored phenylalanine catabolism; 1.75A {Homo sapiens} PDB: 1sqi_A*

Probab=99.26  E-value=2.4e-11  Score=103.69  Aligned_cols=133  Identities=11%  Similarity=0.080  Sum_probs=94.3

Q ss_pred             CCCCcccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCc-c--eEEEE-eCCcEEEEeecCCCCCCCCCC--CCC
Q 029385            5 VENPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDF-D--GAWLF-NYGMGIHLLKSEEPDNLPKAG--KNI   78 (194)
Q Consensus         5 ~~~~~~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~-~--~~~~~-~~g~~~~l~~~~~~~~~~~~~--~~~   78 (194)
                      .+....+++|+||.|.|.|++++.+||+++|||+.....+.... .  ..+++ ..+..+.|.....+.+.+...  ...
T Consensus         3 ~~~~~~i~~i~Hv~i~V~d~~~a~~fY~~~LGf~~v~~~~~e~g~r~~~~~~l~~G~i~~~L~~p~~p~s~~~a~fl~~h   82 (393)
T 3isq_A            3 KPERGRFLHFHSVTFWVGNAKQAASFYCSKMGFEPLAYRGLETGSREVVSHVIKQGKIVFVLSSALNPWNKEMGDHLVKH   82 (393)
T ss_dssp             CCSSCEEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEEESSTTCHHHHHHHHHH
T ss_pred             CCCCCCCceEeEEEEEECCHHHHHHHHHHhcCCEEEEEEcCCCCcEEEEEEEEecCCEEEEEecCCCCCchHHHHHHHhc
Confidence            34556899999999999999999999999999999875321100 1  13333 345666666643332201000  123


Q ss_pred             CCCccEEEEeeCCHHHHHHHHHhCCCeEEccceec--CccceEEEEEeCCCCCEEEEEecC
Q 029385           79 NPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEE--GGINVDQLFFHDPDGSMIEICNCD  137 (194)
Q Consensus        79 ~~g~~hiaf~v~dl~~~~~~l~~~Gi~~~~~~~~~--~g~~~~~~~~~DPDG~~iEi~~~~  137 (194)
                      +++..||||.|+|++++++++.+.|+++..++...  .....+...+++|.|..+.+++..
T Consensus        83 G~Gv~~iAf~VdDvdaa~~ra~a~Ga~~v~eP~~~~~~~G~v~~a~I~~~Gd~~h~lVdr~  143 (393)
T 3isq_A           83 GDGVKDIAFEVEDCDYIVQKARERGAKIMREPWVEQDKFGKVKFAVLQTYGDTTHTLVEKM  143 (393)
T ss_dssp             CSEEEEEEEEEECHHHHHHHHHHHTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEE
T ss_pred             CCcEEEEEEEeCCHHHHHHHHHHCCCeEecCccccccCCceeEEEEEEeCCCcEEEEeccc
Confidence            46899999999999999999999999998877432  112247778999999999998753

>1cjx_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase, iron; 2.40A {Pseudomonas fluorescens} SCOP: d.32.1.3 d.32.1.3

Probab=99.21  E-value=7.7e-12  Score=105.22  Aligned_cols=131  Identities=12%  Similarity=0.095  Sum_probs=87.5

Q ss_pred             CCcccceeeeEEEEcC--CHHHHHHHHHHccCCeEeeeCCC-CCcce---EEEEe--CCcEEEEeec-CCCCCCCC--CC
Q 029385            7 NPLCLKSLNHISLVCR--SVEASLDFYQNVLGFFPIRRPGS-FDFDG---AWLFN--YGMGIHLLKS-EEPDNLPK--AG   75 (194)
Q Consensus         7 ~~~~i~~i~hv~l~v~--Dle~s~~FY~~vLG~~~~~~~~~-~~~~~---~~~~~--~g~~~~l~~~-~~~~~~~~--~~   75 (194)
                      ....+++|+||++.|+  |++++++||+++|||+....... .+..+   .++..  .+..++|.+. ....+...  ..
T Consensus       152 ~~~~i~~idHv~l~V~~~dl~~a~~FY~~vLGf~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~L~~~~~~~~~~~~~~~~  231 (357)
T 1cjx_A          152 VGAGLKVIDHLTHNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAPDGMIRIPLNEESSKGAGQIEEFLM  231 (357)
T ss_dssp             CTTSEEEEEEECEECCTTHHHHHHHHHHHHHCCEEEEEEEEECSSCEEEEEEEECTTSSCEEEEEEECTTCCSHHHHHHH
T ss_pred             CCCCeeEECceEEeechhhHHHHHHHHHHhhCCceeeEEEeccCCcceEEEEEECCCCCEEEEEeeecCCCCChHHHhHH
Confidence            3467899999999999  99999999999999998765320 11111   22222  2356777765 22111000  00


Q ss_pred             CCCCCCccEEEEeeCCHHHHHHHHHhCCCeEEc-ccee-------cCcc-c--------eEEEEEeC----CCCCEEEEE
Q 029385           76 KNINPKDNHISFQCENMAIVERRLKEMKIDYVK-SRVE-------EGGI-N--------VDQLFFHD----PDGSMIEIC  134 (194)
Q Consensus        76 ~~~~~g~~hiaf~v~dl~~~~~~l~~~Gi~~~~-~~~~-------~~g~-~--------~~~~~~~D----PDG~~iEi~  134 (194)
                      ....++..||||.|+|+++++++|+++|+++.. .+..       +.+. +        ...++..|    |+|++++|+
T Consensus       232 ~~~g~g~~HiAf~v~Di~~~~~~L~~~Gv~~~~~~p~~Yy~~l~~r~~~~~~~~~~l~~~~il~d~d~~~~~~g~llqif  311 (357)
T 1cjx_A          232 QFNGEGIQHVAFLTDDLVKTWDALKKIGMRFMTAPPDTYYEMLEGRLPDHGEPVDQLQARGILLDGSSVEGDKRLLLQIF  311 (357)
T ss_dssp             HHTSSBCCEEEEEESCHHHHHHHHHHTTCCBCCCCCHHHHHTHHHHSTTCCCCHHHHHHHTCEEEEEEETTEEEEEEEEE
T ss_pred             hcCCCCeeEEEEEcCCHHHHHHHHHHcCCcccCCCChHHHHHHHHHhccccccHHHHHHcCeEEecCCCCCCCCeEEEEe
Confidence            013467899999999999999999999999876 3310       0000 0        12478888    899999999


Q ss_pred             ecC
Q 029385          135 NCD  137 (194)
Q Consensus       135 ~~~  137 (194)
                      +.+
T Consensus       312 t~~  314 (357)
T 1cjx_A          312 SET  314 (357)
T ss_dssp             BCC
T ss_pred             ccC
Confidence            864

>1tsj_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, nysgxrc; 2.60A {Staphylococcus aureus subsp} SCOP: d.32.1.7

Probab=99.20  E-value=8.1e-10  Score=81.06  Aligned_cols=115  Identities=9%  Similarity=0.038  Sum_probs=71.8

Q ss_pred             ccceeeeEEEEcCCHHHHHHHHHHcc-CCeEeeeC--CCC----CcceEE--EEeCCcEEEEeecCCCCCCCCCCCCCCC
Q 029385           10 CLKSLNHISLVCRSVEASLDFYQNVL-GFFPIRRP--GSF----DFDGAW--LFNYGMGIHLLKSEEPDNLPKAGKNINP   80 (194)
Q Consensus        10 ~i~~i~hv~l~v~Dle~s~~FY~~vL-G~~~~~~~--~~~----~~~~~~--~~~~g~~~~l~~~~~~~~~~~~~~~~~~   80 (194)
                      ++++|...-+.+.|.+++++||+++| |+++....  +..    +....+  +...+..+.+. ...+.    .  .  .
T Consensus         2 ~~~~i~p~l~~~~d~~eA~~FY~~~f~G~~~~~~~~~~~~~~~~~~~v~ha~l~~~~~~~m~~-d~~~~----~--~--~   72 (139)
T 1tsj_A            2 DIPKITTFLMFNNQAEEAVKLYTSLFEDSEIITMAKYGENGPGDPGTVQHSIFTLNGQVFMAI-DANSG----T--E--L   72 (139)
T ss_dssp             CCCSEEEEEECSSCHHHHHHHHHHHSSSCEEEEEEECC-----CTTSEEEEEEEETTEEEEEE-C---------------
T ss_pred             CCCceeEEEEECCCHHHHHHHHHHHcCCCEEEEEEecCcCCCCCCCcEEEEEEEECCEEEEEE-CCCCC----C--C--c
Confidence            34556444344459999999999999 99987421  100    001111  11223222222 11111    1  1  1


Q ss_pred             CccEEEEeeCC---HHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEec
Q 029385           81 KDNHISFQCEN---MAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC  136 (194)
Q Consensus        81 g~~hiaf~v~d---l~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~  136 (194)
                      . ..+++.|+|   +++++++|. .|.++..++.+. .++.+..+++||+|+.|+|...
T Consensus        73 ~-~sl~~~~~d~~evd~~~~~l~-~G~~v~~p~~~~-~wG~~~g~v~Dp~G~~W~i~~~  128 (139)
T 1tsj_A           73 P-ISLFVTVKDTIEMERLFNGLK-DEGAILMPKTNM-PPYREFAWVQDKFGVSFQLALP  128 (139)
T ss_dssp             C-CCEEEECSSHHHHHHHHHHHH-TTCEEEEEEEEE-TTEEEEEEEECTTSCEEEEEEC
T ss_pred             e-EEEEEECCCHHHHHHHHHHHh-CCCEEeeccccc-CCCceEEEEECCCCCEEEEeec
Confidence            1 578999986   788899998 699988777544 3667999999999999999974

>3l20_A Putative uncharacterized protein; hypothetical protein, unknown function; 2.45A {Staphylococcus aureus}

Probab=99.15  E-value=2.2e-09  Score=81.60  Aligned_cols=119  Identities=12%  Similarity=0.106  Sum_probs=77.8

Q ss_pred             cccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCC--c----------ce----EEEEeCCcEEEEeecCCCCCCC
Q 029385            9 LCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFD--F----------DG----AWLFNYGMGIHLLKSEEPDNLP   72 (194)
Q Consensus         9 ~~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~--~----------~~----~~~~~~g~~~~l~~~~~~~~~~   72 (194)
                      |.+.+| ...|.+.|.+++++||+++||++++.+....+  .          .+    +.+...+..+.+....  .. .
T Consensus        22 mmm~~i-~PyL~f~~a~eAi~FY~~vFG~~~~~~~~~~d~p~~~~~~~~~~~~g~v~hael~i~g~~lm~~D~~--g~-~   97 (172)
T 3l20_A           22 FYMTAL-FPYIAFENSKEALAYYEEVFGATDVKRLEVGEEQASHFGMTKEEAQEATMHAEFEVLGVKVLCSDSF--GR-A   97 (172)
T ss_dssp             CCCCEE-EEEEEESCHHHHHHHHHHHSCCEEEEEEECCTTTTTTTTCCHHHHHTCEEEEEEEETTEEEEEEECT--TC-C
T ss_pred             EecCcE-EEEEEECCHHHHHHHHHHHcCCEEEEEEEcccCCcccccCCcccCCCcEEEEEEEECCEEEEEECCC--CC-C
Confidence            334455 67788889999999999999999765421100  0          11    1122234444444321  11 1


Q ss_pred             CCCCCCCCCccEEEEee--------CCHHHHHHHHHhCC-CeEEccceecCccceEEEEEeCCCCCEEEEEec
Q 029385           73 KAGKNINPKDNHISFQC--------ENMAIVERRLKEMK-IDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC  136 (194)
Q Consensus        73 ~~~~~~~~g~~hiaf~v--------~dl~~~~~~l~~~G-i~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~  136 (194)
                          ........+++.|        +|+++++++|.+.| +++..++.+ ..++.+..+++||+|+.|+|...
T Consensus        98 ----~~~~~~~sl~l~~~~~d~~~~~dvd~~~~~l~~~G~a~v~~p~~~-~~wG~r~g~v~DpfG~~W~i~~~  165 (172)
T 3l20_A           98 ----DKINNGISLLIDYDVNNKEDADKVEAFYEQIKDHSSIEIELPFAD-QFWGGKMGVFTDKYGVRWMLHGQ  165 (172)
T ss_dssp             ----CCCCSSEEEEEEEETTCHHHHHHHHHHHHHHTTCTTCEEEEEEEE-CTTSSEEEEEECTTSCEEEEEEE
T ss_pred             ----CCCCCcEEEEEEEccCccCcHHHHHHHHHHHHhCCCceEecCccc-cCCCcEEEEEECCCCCEEEEEeC
Confidence                1112334567766        58999999999999 788877644 34556889999999999999875

>1sp8_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 2.00A {Zea mays} SCOP: d.32.1.3 d.32.1.3

Probab=99.09  E-value=2.4e-10  Score=98.24  Aligned_cols=131  Identities=13%  Similarity=0.208  Sum_probs=86.8

Q ss_pred             CCcccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCC-------cceEEEEeC--CcEEEEeecCCCCCCCCC--C
Q 029385            7 NPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFD-------FDGAWLFNY--GMGIHLLKSEEPDNLPKA--G   75 (194)
Q Consensus         7 ~~~~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~-------~~~~~~~~~--g~~~~l~~~~~~~~~~~~--~   75 (194)
                      .+..+.+|+||++.|+|++++++||+++|||+...+....+       ....|+...  ...+.+.+..........  .
T Consensus       193 ~~~~~~~idHv~i~V~dl~~a~~FY~~vLGf~~~~~~~~~d~~~~~~gl~s~~l~~~~g~i~l~l~e~~~~~~~~s~i~~  272 (418)
T 1sp8_A          193 ADYGLSRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSENVLLPLNEPVHGTKRRSQIQT  272 (418)
T ss_dssp             CCCSEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEC--------CEEEEEEECSSSCCEEEEEEECCCSSSCCHHHH
T ss_pred             CCCCcceEeeEEEecCCHHHHHHHHHHHcCCEEEEEecccccccccccceEEEEEcCCCcEEEEEeecccccCCCcchhh
Confidence            44568899999999999999999999999999887642111       122344322  355666665321000000  0


Q ss_pred             ---CCCCCCccEEEEeeCCHHHHHHHHHh----CCCeEEccc-eec-------Cc-----------cceEEEEEeCCCCC
Q 029385           76 ---KNINPKDNHISFQCENMAIVERRLKE----MKIDYVKSR-VEE-------GG-----------INVDQLFFHDPDGS  129 (194)
Q Consensus        76 ---~~~~~g~~hiaf~v~dl~~~~~~l~~----~Gi~~~~~~-~~~-------~g-----------~~~~~~~~~DPDG~  129 (194)
                         ...++|++||||.|+|++++.++|++    .|+++...+ ...       -+           .....++-+|.+|.
T Consensus       273 fl~~~~G~G~~HIAf~vdDI~~a~~~L~~r~~~~Gv~~l~~Pp~~YY~~l~~r~~~~~~~~~~~~l~~~~IL~D~d~~g~  352 (418)
T 1sp8_A          273 FLDHHGGPGVQHMALASDDVLRTLREMQARSAMGGFEFMAPPTSDYYDGVRRRAGDVLTEAQIKECQELGVLVDRDDQGV  352 (418)
T ss_dssp             HHHHHTSSEEEEEEEEETTHHHHHHHHHTSGGGTSCCBCCCCCHHHHHHHHHHHTTTSCHHHHHHHHHHTCEEEECSSEE
T ss_pred             hhhccCCCCcCEEEEEeCCHHHHHHHHhhhhccCCeEEccCCCcchhHHHHHhhccccchhhHHHHHHhCcEEecCCCCe
Confidence               01356899999999999999999999    799988754 100       00           01134667788888


Q ss_pred             EEEEEecC
Q 029385          130 MIEICNCD  137 (194)
Q Consensus       130 ~iEi~~~~  137 (194)
                      ++.|++.+
T Consensus       353 llqift~~  360 (418)
T 1sp8_A          353 LLQIFTKP  360 (418)
T ss_dssp             EEEEEBCC
T ss_pred             EEEEEecc
Confidence            88888753

>1sqd_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.3 d.32.1.3 PDB: 1tfz_A* 1tg5_A* 1sp9_A

Probab=99.08  E-value=2.8e-10  Score=97.99  Aligned_cols=131  Identities=15%  Similarity=0.166  Sum_probs=88.4

Q ss_pred             CCcccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCC-------cceEEEEeC--CcEEEEeecCCC--CCCCCCC
Q 029385            7 NPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFD-------FDGAWLFNY--GMGIHLLKSEEP--DNLPKAG   75 (194)
Q Consensus         7 ~~~~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~-------~~~~~~~~~--g~~~~l~~~~~~--~~~~~~~   75 (194)
                      .+..+.+|+||++.|+|++++++||+++|||+...+....+       ....++...  ...+.+.+....  .......
T Consensus       196 ~~~~~~~idHv~i~V~dl~~a~~FY~~~LGf~~~~~~~~~d~~~~~~gl~s~~l~~~~g~~~l~l~e~~~~~~~~s~i~~  275 (424)
T 1sqd_A          196 LDYGIRRLDHAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLASNDEMVLLPINEPVHGTKRKSQIQT  275 (424)
T ss_dssp             CCSSEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEC--------CCEEEEEEECTTSCSEEEEEEECCC---CCHHHH
T ss_pred             CcCCcceEeeEEEeeCCHHHHHHHHHHhhCCeEEEEEcccccccccccceEEEEEcCCCcEEEEEecccccCCCcchhhh
Confidence            44578899999999999999999999999999987653211       112233322  256777765421  1110000


Q ss_pred             ---CCCCCCccEEEEeeCCHHHHHHHHHh----CCCeEEccc-eec-------Cc-----------cceEEEEEeCCCCC
Q 029385           76 ---KNINPKDNHISFQCENMAIVERRLKE----MKIDYVKSR-VEE-------GG-----------INVDQLFFHDPDGS  129 (194)
Q Consensus        76 ---~~~~~g~~hiaf~v~dl~~~~~~l~~----~Gi~~~~~~-~~~-------~g-----------~~~~~~~~~DPDG~  129 (194)
                         ...++|++||||.|+|+.++.++|++    .|+++...+ ...       -+           .....++-+|.+|.
T Consensus       276 fl~~~~G~G~~HIAf~vdDI~~a~~~L~~r~~~~Gv~~l~~pp~~YY~~l~~r~~~~~~~~~~~~l~~~~IL~D~d~~g~  355 (424)
T 1sqd_A          276 YLEHNEGAGLQHLALMSEDIFRTLREMRKRSSIGGFDFMPSPPPTYYQNLKKRVGDVLSDDQIKECEELGILVDRDDQGT  355 (424)
T ss_dssp             HHHHHTSCEEEEEEEEESCHHHHHHHHHHHGGGTSCCBCCCCCHHHHHHHHHHHTTTSCHHHHHHHHHHTCEEEECSSEE
T ss_pred             hhhhcCCCCcCEEEEEeCCHHHHHHHHHhhhccCCcEEecCCCcchhHHHHHhhccccchhhHHHHHHcCeEEecCCCCe
Confidence               01356899999999999999999999    899988754 110       00           01135778888899


Q ss_pred             EEEEEecC
Q 029385          130 MIEICNCD  137 (194)
Q Consensus       130 ~iEi~~~~  137 (194)
                      ++.|++.+
T Consensus       356 llqift~~  363 (424)
T 1sqd_A          356 LLQIFTKP  363 (424)
T ss_dssp             EEEEEBCC
T ss_pred             EEEEEccc
Confidence            99998754

>3oms_A PHNB protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, methyltransferase, GL family; 1.90A {Bacillus cereus} SCOP: d.32.1.0

Probab=99.00  E-value=3.2e-08  Score=72.43  Aligned_cols=112  Identities=12%  Similarity=0.047  Sum_probs=72.3

Q ss_pred             eEEEEcC-CHHHHHHHHHHccC-CeEeee--CC----CCCcc--eEEEEeCCcEEEEeecCCCCCCCCCCCCCCCCccEE
Q 029385           16 HISLVCR-SVEASLDFYQNVLG-FFPIRR--PG----SFDFD--GAWLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHI   85 (194)
Q Consensus        16 hv~l~v~-Dle~s~~FY~~vLG-~~~~~~--~~----~~~~~--~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~~hi   85 (194)
                      ...|.+. |.+++++||+++|| .++...  .+    ..+..  .+.+...|..+.+.... +. ..    .......++
T Consensus        12 ~P~L~f~g~a~eA~~FY~~vFg~~~i~~~~~~~~~~~~~~g~v~ha~l~i~g~~lm~~d~~-~~-~~----~~~~~~~~l   85 (138)
T 3oms_A           12 TTFLMFEGKAEEAMNFYTSLFDQSEIVSISRYDENGPGKEGTVIHATFTLNGQEFMCIDSY-VN-HN----FTFTPAMSL   85 (138)
T ss_dssp             CEEEEESSCHHHHHHHHHTTSTTCCEEEEEECCTTCSSCTTSEEEEEEEETTEEEEEEECS-SC-CS----CCCCTTSCE
T ss_pred             EEEEEECCCHHHHHHHHHHHcCCceEEEEEecCCCCCCCCCcEEEEEEEECCEEEEEEcCC-CC-CC----CCCCCCEEE
Confidence            4677778 89999999999999 565432  11    01111  12222344444444322 11 11    111234679


Q ss_pred             EEeeCC---HHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEe
Q 029385           86 SFQCEN---MAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICN  135 (194)
Q Consensus        86 af~v~d---l~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~  135 (194)
                      +|.|+|   +++++++|. .|.++..++.+.. ++.+..+++||+|+.|.|..
T Consensus        86 ~l~~~d~~evd~~~~~l~-~Gg~v~~p~~~~~-wg~~~~~~~Dp~G~~W~i~~  136 (138)
T 3oms_A           86 YVTCETEEEIDTVFHKLA-QDGAILMPLGSYP-FSKKFGWLNDKYGVSWQLTL  136 (138)
T ss_dssp             EEEESSHHHHHHHHHHHH-TTCEEEEEEEEET-TEEEEEEEECTTSCEEEEEE
T ss_pred             EEEcCCHHHHHHHHHHHH-cCCeEecCccccc-CCcEEEEEECCCCCEEEEEe
Confidence            999999   999999996 5778877764443 55689999999999999975

>3isq_A 4-hydroxyphenylpyruvate dioxygenase; tyrosine metabolism, DIS mutation, iron, mental retardation, metal-binding, oxidored phenylalanine catabolism; 1.75A {Homo sapiens} PDB: 1sqi_A*

Probab=98.96  E-value=2.5e-09  Score=91.21  Aligned_cols=131  Identities=14%  Similarity=0.201  Sum_probs=87.8

Q ss_pred             CCcccceeeeEEEEcCC--HHHHHHHHHHccCCeEeeeCC----CCCcceE-E-EEe---CCcEEEEeecCCCCCCCCC-
Q 029385            7 NPLCLKSLNHISLVCRS--VEASLDFYQNVLGFFPIRRPG----SFDFDGA-W-LFN---YGMGIHLLKSEEPDNLPKA-   74 (194)
Q Consensus         7 ~~~~i~~i~hv~l~v~D--le~s~~FY~~vLG~~~~~~~~----~~~~~~~-~-~~~---~g~~~~l~~~~~~~~~~~~-   74 (194)
                      .+..+++|+||++.|.|  ++++++||+++|||+.....+    ..++.+. + ++.   ....+.|.+.......... 
T Consensus       167 ~~~~l~~IDHv~i~V~~~~l~~a~~fY~~~lGf~~~~~~d~~~i~~~~~gl~s~~~~~~~g~v~i~L~ep~~~~~~s~I~  246 (393)
T 3isq_A          167 PKCSLEMIDHIVGNQPDQEMVSASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESIKMPINEPAPGKKKSQIQ  246 (393)
T ss_dssp             CCCCEEEEEEEEEECCTTCHHHHHHHHHHHHCCEEEEEECTTTSBCSSCEEEEEEEECTTSSCEEEEEEEECCSBCCHHH
T ss_pred             CCCCeeEEeEEEEecCccHHHHHHHHHHHHhCCEEeccccccccccCCCcEEEEEEECCCCCEEEEEecCCCCCCCCHHH
Confidence            44578999999999998  999999999999999876532    1111221 1 122   2257888876431110000 


Q ss_pred             ---CCCCCCCccEEEEeeCCHHHHHHHHHhCCCeEEccceec----------Cc------c----ceEEEEEeCCCCCEE
Q 029385           75 ---GKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEE----------GG------I----NVDQLFFHDPDGSMI  131 (194)
Q Consensus        75 ---~~~~~~g~~hiaf~v~dl~~~~~~l~~~Gi~~~~~~~~~----------~g------~----~~~~~~~~DPDG~~i  131 (194)
                         .+..++|+.||||.|+|+.+.+++|++.|+++...|...          .+      .    ....++-.|.+|.++
T Consensus       247 ~fL~~~~G~Gi~HiA~~~dDi~~~~~~l~~~Gv~~l~~P~~YY~~l~~r~~~~~~~~~e~~~~l~~~~IL~D~d~~g~ll  326 (393)
T 3isq_A          247 EYVDYNGGAGVQHIALKTEDIITAIRHLRERGLEFLSVPSTYYKQLREKLKTAKIKVKENIDALEELKILVDYDEKGYLL  326 (393)
T ss_dssp             HHHHHHTSSEEEEEEEEESCHHHHHHHHHHTTCCBCCCCHHHHHHHHHHHTTCSSCCCSCHHHHHHHTCEEEECSSCEEE
T ss_pred             HHHHHcCCCCcceEEEEcCCHHHHHHHHHHcCCccCCCCccHHHHHHHHhccccccccccHHHHHhcCcEEccCCCceEE
Confidence               012367899999999999999999999999988754210          00      0    123566677788888


Q ss_pred             EEEecC
Q 029385          132 EICNCD  137 (194)
Q Consensus       132 Ei~~~~  137 (194)
                      .|++.+
T Consensus       327 QifT~~  332 (393)
T 3isq_A          327 QIFTKP  332 (393)
T ss_dssp             EEEBCC
T ss_pred             EEEeec
Confidence            888754

>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}

Probab=98.19  E-value=5.5e-06  Score=76.77  Aligned_cols=127  Identities=23%  Similarity=0.283  Sum_probs=78.4

Q ss_pred             CcccceeeeEEEEcC---CHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeC--CcEEEEeecCCCCC-----------C
Q 029385            8 PLCLKSLNHISLVCR---SVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNY--GMGIHLLKSEEPDN-----------L   71 (194)
Q Consensus         8 ~~~i~~i~hv~l~v~---Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~--g~~~~l~~~~~~~~-----------~   71 (194)
                      ...+.+...+.+...   .++++++||++.|++.........=| ..++.+.  ...+++........           .
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (941)
T 3opy_B            4 ASLFNGTSFITLFAPNISLLQASIDFYTNFLGFAIRKNSNQKLF-WLQLEEDQNNVSIQLILDPEHAASVSQIDQNIRNL   82 (941)
T ss_dssp             -CCSCEEEEEEEECCC-CC-HHHHHHHHHTTCCEECSSCSCCC----EECCTTSCCEEEEECSSCSCHHHHHHHHHHHCC
T ss_pred             CceecceeEEEEEeCCHHHHHHHHHHHHhhccceeccccCCcce-eEEEecCCCeEEEEEEeccccchhHHHHHHHHhhh
Confidence            345778888888774   78999999999999987775431000 1222112  23445443311110           0


Q ss_pred             CCCC--CCCCCCccEEEEeeCCHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEecCC
Q 029385           72 PKAG--KNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV  138 (194)
Q Consensus        72 ~~~~--~~~~~g~~hiaf~v~dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~~  138 (194)
                      ....  ..=.....|++|.+.|++++.++|.+.+.++...+.+...   ..+|..||+||.|++.+..+
T Consensus        83 ~~~~~~~dW~~~~~~l~f~~~dL~~~~~~L~~~~~~~Q~~ps~~~~---~e~yt~DPlGNvIgfs~~~~  148 (941)
T 3opy_B           83 TRSLYRKDWRSIQSNIAFKSSSLSKLVKLLKDGGHPVQQSPNEISP---FEVYTVDPLGSLIGFSGFKN  148 (941)
T ss_dssp             C----------CCCEEEEEESCHHHHHHHHHTTTCCCBCSSSSCSC---EEECCSSCCEEEECC-CCSS
T ss_pred             hcccccccccccCceEEEEeCCHHHHHHHHHhcCCccccCCCcCCC---ceEEeECCCCCEEEEeccCC
Confidence            0000  0001233499999999999999999999887765532222   78999999999999998765

>1u69_A Hypothetical protein; structural genomics, MSCG, pseudomonas aeruginosa PAO1, HYPO protein, protein structure initiative (PSI); 1.60A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=97.71  E-value=0.00098  Score=49.78  Aligned_cols=102  Identities=12%  Similarity=0.066  Sum_probs=63.4

Q ss_pred             eEEEEcC-CHHHHHHHHHHcc-CCeEee--eCCC---CC-cceE---EEEeCCcEEEEeecCCCCCCCCCCCCCCCCccE
Q 029385           16 HISLVCR-SVEASLDFYQNVL-GFFPIR--RPGS---FD-FDGA---WLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNH   84 (194)
Q Consensus        16 hv~l~v~-Dle~s~~FY~~vL-G~~~~~--~~~~---~~-~~~~---~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~~h   84 (194)
                      ...|.+. |.+++.+||+++| |.++..  +.+.   .+ .+..   -+...+..+.+.. ..+ ..     ... ....
T Consensus         8 ~PyL~f~g~a~eAi~FY~~vF~ga~i~~~~~~~~~~~~~~~g~Vmhael~i~g~~~m~~d-~~p-~~-----~~~-~~~s   79 (163)
T 1u69_A            8 TICLWYDSAALEAATFYAETFPDSAVLAVHRAPGDYPSGKEGDVLTVEFRVMGIPCLGLN-GGP-AF-----RHS-EAFS   79 (163)
T ss_dssp             EEEEEESSCHHHHHHHHHHHSTTEEEEEEEECSSCBTTBCTTSEEEEEEEETTEEEEEEE-CCT-TC-----CCC-TTEE
T ss_pred             eEEEEECCCHHHHHHHHHHHhCCCEEeEEEeccCCCCCCCCCeEEEEEEEECCEEEEEEC-CCC-Cc-----CCC-CceE
Confidence            4567777 9999999999999 998774  2211   00 0111   1222333333332 211 11     111 2237


Q ss_pred             EEEeeCC---HHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEec
Q 029385           85 ISFQCEN---MAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC  136 (194)
Q Consensus        85 iaf~v~d---l~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~  136 (194)
                      +.+.|+|   +++++++|.+.|.++.     .-|      +++||.|+.|-|...
T Consensus        80 l~v~~~d~~e~d~~~~~L~~~Gg~v~-----~~G------~v~D~fGv~W~i~~~  123 (163)
T 1u69_A           80 FQVATDDQAETDRLWNAIVDNGGEES-----ACG------WCRDKWGISWQITPR  123 (163)
T ss_dssp             EEEEESSHHHHHHHHHHHHHTTCEEC-----STT------EEECTTSCEEEEEEH
T ss_pred             EEEEeCCHHHHHHHHHHHHhCCCEEE-----EEE------EEECCCCCEEEEEeE
Confidence            8888886   7888899987777666     122      899999999999864

>3p8a_A Uncharacterized protein; mainly antiparallel beta sheets, alpha and beta protein, UNK function; HET: MSE BTB PG4; 1.95A {Staphylococcus aureus}

Probab=97.04  E-value=0.00075  Score=54.60  Aligned_cols=90  Identities=14%  Similarity=0.166  Sum_probs=63.1

Q ss_pred             ccceeeeEEEEcCCHHHHHHHHHHccC-----CeEeeeCCCCC---cceEEEEeCCcEEEEeecCCCCCC--------C-
Q 029385           10 CLKSLNHISLVCRSVEASLDFYQNVLG-----FFPIRRPGSFD---FDGAWLFNYGMGIHLLKSEEPDNL--------P-   72 (194)
Q Consensus        10 ~i~~i~hv~l~v~Dle~s~~FY~~vLG-----~~~~~~~~~~~---~~~~~~~~~g~~~~l~~~~~~~~~--------~-   72 (194)
                      ++.+|+|+.+.|++++        .||     |.+.....+..   .+....+ .+..++++....+...        + 
T Consensus        21 M~~~lDHlVi~v~~l~--------~lG~~~~~f~~~~GG~H~~~GT~N~Li~f-dg~YLElIai~~~~~~~~~~~~~~~~   91 (274)
T 3p8a_A           21 MILKFDHIIHYIDQLD--------RFSFPGDVIKLHSGGYHHKYGTFNKLGYI-NENYIELLDVENNEKLKKMAKTIEGG   91 (274)
T ss_dssp             CCCEEEEEEEECTTGG--------GCCCGGGSSCCEEEEEETTTTEEEEEEEC-SSSEEEEEEESCHHHHHHHTTSTGGG
T ss_pred             ccccCCEEEEEeccHH--------HcCCccceEEeCCCccCCCCCCEEEEEee-CCEEEEEEeecCcccccccccccCcc
Confidence            4678999999999874        467     87766543322   2233334 6789999987654211        1 


Q ss_pred             --CCC----CCCCCCccEEEEeeCCHHHHHHHHHhCCCeEEc
Q 029385           73 --KAG----KNINPKDNHISFQCENMAIVERRLKEMKIDYVK  108 (194)
Q Consensus        73 --~~~----~~~~~g~~hiaf~v~dl~~~~~~l~~~Gi~~~~  108 (194)
                        ...    ....+|+.++++.++|+++..+++.+.|+.+..
T Consensus        92 ~~f~~~~~~~~~geGl~~~alrt~Di~a~~a~l~~~Gl~~~~  133 (274)
T 3p8a_A           92 VAFATQIVQEKYEQGFKNICLHTNDIEAVKNKLQSEQVEVVG  133 (274)
T ss_dssp             TCTTTHHHHTTTCCEEEEEEEECSCHHHHHHHHHTTTCEEEE
T ss_pred             chHHHHhhhhccCCCeEEEEEecCCHHHHHHHHHHcCCCcCC
Confidence              000    134579999999999999999999999998654

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A*

Probab=96.55  E-value=0.0099  Score=47.20  Aligned_cols=34  Identities=15%  Similarity=0.014  Sum_probs=31.2

Q ss_pred             cccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeC
Q 029385            9 LCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRP   43 (194)
Q Consensus         9 ~~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~   43 (194)
                      ..+.+++||.|.|+|++++.+|| ++|||+...+.
T Consensus       154 ~~i~glghV~L~v~d~~~~~~fl-~~LG~~~~~~~  187 (252)
T 3pkv_A          154 DQLLSIGEINITTSDVEQAATRL-KQAELPVKLDQ  187 (252)
T ss_dssp             GGCCEEEEEEEECSCHHHHHHHH-HHTTCCCCGGG
T ss_pred             HHCcEeeeEEEEeCCHHHHHHHH-HHcCCCcccCC
Confidence            46889999999999999999999 99999998764

>3e0r_A C3-degrading proteinase (CPPA protein); MCSG, PSI, SAD, structural GE protein structure initiative; 2.30A {Streptococcus pneumoniae}

Probab=96.50  E-value=0.0029  Score=50.12  Aligned_cols=90  Identities=10%  Similarity=0.122  Sum_probs=60.7

Q ss_pred             ceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeCCcEEEEeecCCCCCCCCCCCCCCCCccEEEEeeC-
Q 029385           12 KSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQCE-   90 (194)
Q Consensus        12 ~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~~hiaf~v~-   90 (194)
                      ..+ ||.|.|.|.+++  ||++ +|+     .    ..          +.+.+...+ ..+..+ ....++..+-|.|+ 
T Consensus       151 fti-~I~LnV~d~~~s--Fy~~-~~~-----~----~~----------~~F~~a~G~-dl~~~~-~~t~gLe~l~~~v~~  205 (244)
T 3e0r_A          151 FEI-SMELHLPTDIES--FLES-SEI-----G----AS----------LDFIPAQGQ-DLTVDN-TVTWDLSMLKFLVNE  205 (244)
T ss_dssp             EEE-EEEEEECTTCCC--SCCH-HHH-----T----TT----------EEEEECCCT-TTTCCT-TSBSSEEEEEEEESS
T ss_pred             cEE-EEEEEcCchHHH--Hhhc-cCC-----c----cc----------EEEEcccCC-CCCCCC-CCccCceEEEEEeCH
Confidence            347 999999999998  9986 444     1    12          222222222 222222 55567888888887 


Q ss_pred             -CHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEE
Q 029385           91 -NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEIC  134 (194)
Q Consensus        91 -dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~  134 (194)
                       |+.++.++|++.|..+...     .   ..+...||.|..|=+.
T Consensus       206 ~dl~~l~~~L~~~g~~idkk-----~---~~l~~~DpsgIeiwF~  242 (244)
T 3e0r_A          206 LDIASLRQKFESTEYFIPKS-----E---KFFLGKDRNNVELWFE  242 (244)
T ss_dssp             CCHHHHHHHTTTSCEECCTT-----C---CEEEEECTTSCEEEEE
T ss_pred             HHHHHHHHHHHhCCceEccc-----C---CEEEEECCCCCEEEEE
Confidence             8999999999888643321     1   6789999999988665

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}

Probab=95.58  E-value=0.09  Score=36.99  Aligned_cols=87  Identities=14%  Similarity=0.147  Sum_probs=58.0

Q ss_pred             CCCccEEEEeeCCHHHHHHHHHh-CCCeEEcccee--------cCccceEEEEEeCCCCCEEEEEecCCCCcC---c---
Q 029385           79 NPKDNHISFQCENMAIVERRLKE-MKIDYVKSRVE--------EGGINVDQLFFHDPDGSMIEICNCDVLPVV---P---  143 (194)
Q Consensus        79 ~~g~~hiaf~v~dl~~~~~~l~~-~Gi~~~~~~~~--------~~g~~~~~~~~~DPDG~~iEi~~~~~~p~~---p---  143 (194)
                      -.++.|+++.|.|+++..+...+ .|.++......        ..+   ...++.-++|..+++.+.......   +   
T Consensus        17 ~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~   93 (156)
T 3kol_A           17 LRKVHHIALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASG---KVANFITPDGTILDLFGEPELSPPDPNPEKT   93 (156)
T ss_dssp             SCCCCEEEEEESCHHHHHHHHTTTSCCEECCTTTSCTTTHHHHHTT---SEEEEECTTSCEEEEEECTTCCCSSSSTTCC
T ss_pred             cceEeEEEEEeCCHHHHHHHHHhhcCCEEEeecccCcchhcccCCC---cEEEEEeCCCCEEEEEecCCCCcCCCCCCCC
Confidence            35889999999999999999997 79998753211        112   456777788999999987542111   1   


Q ss_pred             CCCcchhhcccccccchhhhhhhhhh
Q 029385          144 LAGDAVRIRSCTSTVNCNFHQQQIQQ  169 (194)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (194)
                      ......+.+.+ +.-|++...+++..
T Consensus        94 ~~~~~h~~~~v-~~~d~~~~~~~l~~  118 (156)
T 3kol_A           94 FTRAYHLAFDI-DPQLFDRAVTVIGE  118 (156)
T ss_dssp             CSSCCEEEEEC-CGGGHHHHHHHHHH
T ss_pred             CCceEEEEEEe-cHHHHHHHHHHHHH
Confidence            11112344445 44588888888764

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A

Probab=95.35  E-value=0.1  Score=35.94  Aligned_cols=85  Identities=16%  Similarity=0.178  Sum_probs=55.0

Q ss_pred             CCccEEEEeeCCHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEecCCCCcCcC----C-Ccc--hhhc
Q 029385           80 PKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVVPL----A-GDA--VRIR  152 (194)
Q Consensus        80 ~g~~hiaf~v~dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~~~p~~p~----~-~~~--~~~~  152 (194)
                      .++.|+++.|.|+++..+..+..|.+........+..+.+..++.. +|..+|+.+....+ .+.    . ..|  .+..
T Consensus         6 ~~i~hv~i~v~Dl~~a~~FY~~lG~~~~~~~~~~~~~~~~~~~~~~-~~~~l~l~~~~~~~-~~~~~~~~~~~g~~hiaf   83 (133)
T 3hdp_A            6 LKVHHIGYAVKNIDSALKKFKRLGYVEESEVVRDEVRKVYIQFVIN-GGYRVELVAPDGED-SPINKTIKKGSTPYHICY   83 (133)
T ss_dssp             CCEEEEEEECSCHHHHHHHHHHTTCEECSCCEEETTTTEEEEEEEE-TTEEEEEEEESSTT-CTHHHHTTTSCEEEEEEE
T ss_pred             eeeCEEEEEECCHHHHHHHHHHcCCeeecceeccCCcceEEEEEeC-CCEEEEEEecCCCC-ChHHHHHhcCCceEEEEE
Confidence            4789999999999999999888899876543222222335555554 67889999854321 111    0 122  3455


Q ss_pred             ccccccchhhhhhhhhh
Q 029385          153 SCTSTVNCNFHQQQIQQ  169 (194)
Q Consensus       153 ~~~~~~~~~~~~~~~~~  169 (194)
                      .+   -|+++..+++..
T Consensus        84 ~v---~di~~~~~~l~~   97 (133)
T 3hdp_A           84 EV---EDIQKSIEEMSQ   97 (133)
T ss_dssp             EE---SCHHHHHHHHTT
T ss_pred             Ec---CCHHHHHHHHHH
Confidence            56   477788777664

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}

Probab=94.79  E-value=0.22  Score=33.63  Aligned_cols=88  Identities=13%  Similarity=0.055  Sum_probs=56.4

Q ss_pred             CccEEEEeeCCHHHHHHHHH-hCCCeEEccceecCccceEEEEEeCCCCCEEEEEecCCCCcCcCC-Cc--chhhccccc
Q 029385           81 KDNHISFQCENMAIVERRLK-EMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVVPLA-GD--AVRIRSCTS  156 (194)
Q Consensus        81 g~~hiaf~v~dl~~~~~~l~-~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~~~p~~p~~-~~--~~~~~~~~~  156 (194)
                      ++.|+++.|.|+++..+... -.|.+....... +..+...+++..++|..+++.+....+..|.. ..  ..+.+.+.+
T Consensus         3 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~-~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~g~~hi~~~v~d   81 (127)
T 3e5d_A            3 KIEHVALWTTNLEQMKQFYVTYFGATANDLYEN-KTKGFNSYFLSFEDGARLEIMSRTDVTGKTTGENLGWAHIAISTGT   81 (127)
T ss_dssp             CCCEEEEECSSHHHHHHHHHHHHCCEECCCEEE-GGGTEEEEEEECSSSCEEEEEEETTCCCCCCSSCSSCCCEEEECSS
T ss_pred             EEEEEEEEECCHHHHHHHHHHhcCCeeeccccc-CCCCccEEEEEcCCCcEEEEEecCCCCCCCCcCCCceEEEEEEcCC
Confidence            57899999999999999986 469887654321 11223566777778999999987644333321 11  234555522


Q ss_pred             ccchhhhhhhhhh
Q 029385          157 TVNCNFHQQQIQQ  169 (194)
Q Consensus       157 ~~~~~~~~~~~~~  169 (194)
                      .-+++...+++..
T Consensus        82 ~~~v~~~~~~l~~   94 (127)
T 3e5d_A           82 KEAVDELTEKLRQ   94 (127)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
Confidence            2226677777653

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis}

Probab=94.58  E-value=0.25  Score=33.14  Aligned_cols=84  Identities=13%  Similarity=0.088  Sum_probs=53.1

Q ss_pred             CccEEEEeeCCHHHHHHHHHh-CCCeEEccceecCccceEEEEEeCCCCCEEEEEecCCCCcCcC----CCcchhhcccc
Q 029385           81 KDNHISFQCENMAIVERRLKE-MKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVVPL----AGDAVRIRSCT  155 (194)
Q Consensus        81 g~~hiaf~v~dl~~~~~~l~~-~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~~~p~~p~----~~~~~~~~~~~  155 (194)
                      ++.|+++.|.|+++..+..++ .|.++........+ ....+++.-+++ .++|......+..|.    .....+...+ 
T Consensus         5 ~i~hi~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~-~~~~~~~~~~~~-~l~l~~~~~~~~~~~~~~~~g~~~~~~~v-   81 (126)
T 2p25_A            5 EIHHVAINASNYQATKNFYVEKLGFEVLRENHRPEK-NDIKLDLKLGSQ-ELEIFISDQFPARPSYPEALGLRHLAFKV-   81 (126)
T ss_dssp             CCCCEEEEESCHHHHHHHHTTTTCCEEEEEEEEGGG-TEEEEEEEETTE-EEEEEECTTCCCCCCSSCCSSCCCEEEEC-
T ss_pred             ccceEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCC-cceEEEEecCCe-EEEEEeccCCCCCCCCCCCccceEEEEEe-
Confidence            578999999999999999986 89987754221111 224455666666 899987543222211    1112355556 


Q ss_pred             cccchhhhhhhhhh
Q 029385          156 STVNCNFHQQQIQQ  169 (194)
Q Consensus       156 ~~~~~~~~~~~~~~  169 (194)
                        -|++...+++..
T Consensus        82 --~d~~~~~~~l~~   93 (126)
T 2p25_A           82 --EHIEEVIAFLNE   93 (126)
T ss_dssp             --SCHHHHHHHHHH
T ss_pred             --CCHHHHHHHHHH
Confidence              478888877764

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2

Probab=94.54  E-value=0.22  Score=33.10  Aligned_cols=80  Identities=11%  Similarity=0.156  Sum_probs=55.0

Q ss_pred             CccEEEEeeCCHHHHHHHHHh-CCCeEEccceecCccceEEEEEeCCCCCEEEEEecCCCCcCcCCCcchhhcccccccc
Q 029385           81 KDNHISFQCENMAIVERRLKE-MKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVVPLAGDAVRIRSCTSTVN  159 (194)
Q Consensus        81 g~~hiaf~v~dl~~~~~~l~~-~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~~~p~~p~~~~~~~~~~~~~~~~  159 (194)
                      ++.|+.+.|.|+++..+...+ .|.++....   +.   ...++..++|..+++.+....+   ......+.+.+.++-|
T Consensus         3 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~---~~---~~~~~~~~~~~~l~l~~~~~~~---~~~~~~~~~~v~~~~d   73 (113)
T 1xqa_A            3 GIKHLNLTVADVVAAREFLEKYFGLTCSGTR---GN---AFAVMRDNDGFILTLMKGKEVQ---YPKTFHVGFPQESEEQ   73 (113)
T ss_dssp             CCCEEEEEESCHHHHHHHHHHHHCCEEEEEE---TT---TEEEEECTTCCEEEEEECSSCC---CCTTCCEEEECSSHHH
T ss_pred             eeEEEEEEeCCHHHHHHHHHHhCCCEEeccC---CC---cEEEEEcCCCcEEEEEeCCCCC---CCceeEEEEEcCCHHH
Confidence            678999999999999999886 799876532   11   2356666778889988764432   1222234555655578


Q ss_pred             hhhhhhhhhh
Q 029385          160 CNFHQQQIQQ  169 (194)
Q Consensus       160 ~~~~~~~~~~  169 (194)
                      ++...+++..
T Consensus        74 ~~~~~~~l~~   83 (113)
T 1xqa_A           74 VDKINQRLKE   83 (113)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            8888888764

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} SCOP: d.32.1.0

Probab=94.52  E-value=0.24  Score=33.47  Aligned_cols=84  Identities=12%  Similarity=0.061  Sum_probs=53.2

Q ss_pred             CccEEEEeeCCHHHHHHHHHh-CCCeEEccceecCccceEEEEEeCCCCCEEEEEecCCCCcC--------cCCCcchhh
Q 029385           81 KDNHISFQCENMAIVERRLKE-MKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVV--------PLAGDAVRI  151 (194)
Q Consensus        81 g~~hiaf~v~dl~~~~~~l~~-~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~~~p~~--------p~~~~~~~~  151 (194)
                      ++.|+++.|.|+++..+...+ .|.++....... ..+.+..++.. +|..+++.+.......        +-.....+.
T Consensus         5 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~-~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~g~~hi~   82 (134)
T 3rmu_A            5 RLNHVAIAVPDLEKAAAFYKNILGAQVSEAVPLP-EHGVSVVFVNL-GNTKMELLHPLGLDSPIAGFLQKNKAGGMHHIC   82 (134)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHTSCCEECCCEEEG-GGTEEEEEEEC-SSSEEEEEEECSTTCTTHHHHHHCTTCEEEEEE
T ss_pred             eeeeEEEEeCCHHHHHHHHHHhcCCEEeEeeecC-CCCEEEEEEec-CCEEEEEEecCCCCchhhhhhhccCCCCceEEE
Confidence            578999999999999999997 899877543221 11224455554 6788999875432211        011112344


Q ss_pred             cccccccchhhhhhhhhh
Q 029385          152 RSCTSTVNCNFHQQQIQQ  169 (194)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~  169 (194)
                      +.+   -|++...+++..
T Consensus        83 ~~v---~d~~~~~~~l~~   97 (134)
T 3rmu_A           83 IEV---DNINAAVMDLKK   97 (134)
T ss_dssp             EEE---SCHHHHHHHHHH
T ss_pred             EEc---CCHHHHHHHHHH
Confidence            555   477778777664

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans}

Probab=94.30  E-value=0.36  Score=32.58  Aligned_cols=85  Identities=8%  Similarity=0.008  Sum_probs=54.2

Q ss_pred             CCccEEEEeeCCHHHHHHHHHh-CCCeEEccceecCccceEEEEEeCCCCCEEEEEe-------cCCCCc---CcCCCcc
Q 029385           80 PKDNHISFQCENMAIVERRLKE-MKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICN-------CDVLPV---VPLAGDA  148 (194)
Q Consensus        80 ~g~~hiaf~v~dl~~~~~~l~~-~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~-------~~~~p~---~p~~~~~  148 (194)
                      .++.|+++.|.|+++..+...+ .|.++........ .....+++..+ +..++|..       ....+.   +|-...+
T Consensus         4 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~-~~~~~~~~~~~-~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~g   81 (134)
T 3l7t_A            4 KAVHHVALIVSDYDKSYEFYVNQLGFEVIRENHRPK-RHDYKLDLKCG-DIELEIFGNKLTDSNYCAPPERISWPREACG   81 (134)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEETT-TTEEEEEEEET-TEEEEEEECCTTSTTCCCCCCCCCSSSCCSE
T ss_pred             eeEeEEEEEeCCHHHHHHHHHHhcCCEEEEEeecCC-CcceEEEEecC-CeEEEEEecccccccccCCccccCCCCCCCC
Confidence            3678999999999999999976 7999876543222 22245566654 44899988       332222   2211122


Q ss_pred             --hhhcccccccchhhhhhhhhh
Q 029385          149 --VRIRSCTSTVNCNFHQQQIQQ  169 (194)
Q Consensus       149 --~~~~~~~~~~~~~~~~~~~~~  169 (194)
                        .+.+.+   -|++...++++.
T Consensus        82 ~~~~~~~v---~d~~~~~~~l~~  101 (134)
T 3l7t_A           82 LRHLAFYV---EDVEASRQELIA  101 (134)
T ss_dssp             EEEEEEEC---SCHHHHHHHHHH
T ss_pred             eEEEEEEE---CCHHHHHHHHHh
Confidence              345556   478888888764

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A

Probab=94.03  E-value=0.76  Score=31.18  Aligned_cols=85  Identities=11%  Similarity=0.010  Sum_probs=53.5

Q ss_pred             CccEEEEeeCCHHHHHHHHHh-CCCeEEccceecCccceEEEEEeCCC---CCEEEEEecCCCCcCcCC-Ccchhhcccc
Q 029385           81 KDNHISFQCENMAIVERRLKE-MKIDYVKSRVEEGGINVDQLFFHDPD---GSMIEICNCDVLPVVPLA-GDAVRIRSCT  155 (194)
Q Consensus        81 g~~hiaf~v~dl~~~~~~l~~-~Gi~~~~~~~~~~g~~~~~~~~~DPD---G~~iEi~~~~~~p~~p~~-~~~~~~~~~~  155 (194)
                      ++.|+++.|.|+++..+...+ .|.++........+ .....++.-++   |..+++......+..+.. ....+.+.+ 
T Consensus         2 ~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~v-   79 (135)
T 1f9z_A            2 RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEY-KYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSV-   79 (135)
T ss_dssp             CEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTT-TEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEEEC-
T ss_pred             cceEEEEEeCCHHHHHHHHHhccCcEEEEecccCCC-ceEEEEEecCCCCCCcEEEEEEcCCCCcccCCCCccEEEEEe-
Confidence            468999999999999999986 89988754322222 12445565554   789999865332211111 112355666 


Q ss_pred             cccchhhhhhhhhh
Q 029385          156 STVNCNFHQQQIQQ  169 (194)
Q Consensus       156 ~~~~~~~~~~~~~~  169 (194)
                        -|++...+++..
T Consensus        80 --~d~~~~~~~l~~   91 (135)
T 1f9z_A           80 --DNAAEACEKIRQ   91 (135)
T ss_dssp             --SCHHHHHHHHHH
T ss_pred             --CCHHHHHHHHHH
Confidence              477777777653

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis}

Probab=92.79  E-value=0.52  Score=33.44  Aligned_cols=88  Identities=9%  Similarity=0.049  Sum_probs=54.8

Q ss_pred             CCCCCccEEEEeeCCHHHHHHHHHh-CCCeEEccceecC-------------ccceEEEEEeCCCCCEEEEEecCCCCcC
Q 029385           77 NINPKDNHISFQCENMAIVERRLKE-MKIDYVKSRVEEG-------------GINVDQLFFHDPDGSMIEICNCDVLPVV  142 (194)
Q Consensus        77 ~~~~g~~hiaf~v~dl~~~~~~l~~-~Gi~~~~~~~~~~-------------g~~~~~~~~~DPDG~~iEi~~~~~~p~~  142 (194)
                      ..-.++.|+++.|.|+++..+...+ .|.++........             ....+..++.. .+..|||.+....+. 
T Consensus        15 ~~~~~i~Hv~i~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-g~~~leL~~~~~~~~-   92 (159)
T 3gm5_A           15 LDMRNTVQIGIVVRDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAKLAFFEL-GPLQLELIEPDENPS-   92 (159)
T ss_dssp             CCGGGCEEEEEECSCHHHHHHHHHHHTTCCCCCCEECCCHHHHCCEETTEECCCCEEEEEEEE-TTEEEEEEEECSSSC-
T ss_pred             cccccccEEEEEeCCHHHHHHHHHHhhCCCCceEEecCCcccccceeecccccceEEEEEEec-CCEEEEEEEECCCCC-
Confidence            4456889999999999999999986 8987653221100             11224445544 578899998644221 


Q ss_pred             cC------CCcc--hhhcccccccchhhhhhhhhh
Q 029385          143 PL------AGDA--VRIRSCTSTVNCNFHQQQIQQ  169 (194)
Q Consensus       143 p~------~~~~--~~~~~~~~~~~~~~~~~~~~~  169 (194)
                      ++      ...|  .+.+.+   -|++...+++..
T Consensus        93 ~~~~~l~~~~~g~~Hiaf~v---~di~~~~~~l~~  124 (159)
T 3gm5_A           93 TWREFLDKNGEGIHHIAFVV---KDMDRKVEELYR  124 (159)
T ss_dssp             HHHHHHHHHCSEEEEEEEEC---SCHHHHHHHHHH
T ss_pred             hhHHHhhcCCceEEEEEEEc---CCHHHHHHHHHH
Confidence            11      1122  345556   477788888764

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1

Probab=92.77  E-value=1.2  Score=30.99  Aligned_cols=86  Identities=5%  Similarity=-0.008  Sum_probs=54.8

Q ss_pred             CCccEEEEeeCCHHHHHHHHHh-CCCeEEccceecCccceEEEEEeCCC---CCEEEEEecCCCCcCcCC-Ccchhhccc
Q 029385           80 PKDNHISFQCENMAIVERRLKE-MKIDYVKSRVEEGGINVDQLFFHDPD---GSMIEICNCDVLPVVPLA-GDAVRIRSC  154 (194)
Q Consensus        80 ~g~~hiaf~v~dl~~~~~~l~~-~Gi~~~~~~~~~~g~~~~~~~~~DPD---G~~iEi~~~~~~p~~p~~-~~~~~~~~~  154 (194)
                      .++.|+.+.|.|+++..+...+ .|.++........+ .....++.-++   +..++|.+....+..+-. ....+.+.+
T Consensus         7 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v   85 (144)
T 2c21_A            7 RRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPED-KYTLVFLGYGPEMSSTVLELTYNYGVTSYKHDEAYGHIAIGV   85 (144)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGG-TEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEEEE
T ss_pred             ceeEEEEEEeCCHHHHHHHHHhcCCCEEEEeeecCCC-CeEEEEEEcCCCCCceEEEEEecCCCCCCCCCCCceEEEEEe
Confidence            3678999999999999999975 79988754321111 12445666554   689999886542222211 112355666


Q ss_pred             ccccchhhhhhhhhh
Q 029385          155 TSTVNCNFHQQQIQQ  169 (194)
Q Consensus       155 ~~~~~~~~~~~~~~~  169 (194)
                         -|++...+++..
T Consensus        86 ---~d~~~~~~~l~~   97 (144)
T 2c21_A           86 ---EDVKELVADMRK   97 (144)
T ss_dssp             ---SCHHHHHHHHHH
T ss_pred             ---CCHHHHHHHHHH
Confidence               477777777664

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6

Probab=92.26  E-value=0.84  Score=31.68  Aligned_cols=87  Identities=15%  Similarity=0.158  Sum_probs=54.7

Q ss_pred             CCccEEEEeeCCHHHHHHHHHhCCCeEEccceec----------CccceEEEEEeCCCC-CEEEEEecC--CCC-c---C
Q 029385           80 PKDNHISFQCENMAIVERRLKEMKIDYVKSRVEE----------GGINVDQLFFHDPDG-SMIEICNCD--VLP-V---V  142 (194)
Q Consensus        80 ~g~~hiaf~v~dl~~~~~~l~~~Gi~~~~~~~~~----------~g~~~~~~~~~DPDG-~~iEi~~~~--~~p-~---~  142 (194)
                      .++.|+++.|.|+++..+..++.|.++.......          +.......++.-++| ..|||.+..  ..+ .   .
T Consensus        10 ~~i~hv~l~v~D~~~a~~FY~~lG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~l~l~~~~~~~~~~~~~~~   89 (153)
T 1ss4_A           10 LRMDNVSIVVESLDNAISFFEEIGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHSRIELSRFLTPPTIADHRTA   89 (153)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHHTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTSSCEEEEEEEEESCCCCBCTTC
T ss_pred             cceeeEEEEeCCHHHHHHHHHHCCCEEEeeccCCcchhheeeCCCCCcEEEEEEECCCCCcEEEEEEecCCCCcccccCC
Confidence            3678999999999999998888899876432110          011235667777777 789998742  211 0   1


Q ss_pred             cCCCcc--hhhcccccccchhhhhhhhhh
Q 029385          143 PLAGDA--VRIRSCTSTVNCNFHQQQIQQ  169 (194)
Q Consensus       143 p~~~~~--~~~~~~~~~~~~~~~~~~~~~  169 (194)
                      +....|  .+.+.+   -|++...+++..
T Consensus        90 ~~~~~g~~hl~~~v---~d~~~~~~~l~~  115 (153)
T 1ss4_A           90 PVNALGYLRVMFTV---EDIDEMVSRLTK  115 (153)
T ss_dssp             CSSSBEEEEEEEEE---SCHHHHHHHHHH
T ss_pred             CCCCCceEEEEEEe---CCHHHHHHHHHH
Confidence            111222  345555   467788777664

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP}

Probab=91.97  E-value=0.68  Score=31.84  Aligned_cols=86  Identities=12%  Similarity=0.073  Sum_probs=53.3

Q ss_pred             CccEEEEeeCCHHHHHHHHHh-CCCeEEccceecCccceEEEEEeCCCCCEEEEEecCCCCcCcC--CCcc--hhhcccc
Q 029385           81 KDNHISFQCENMAIVERRLKE-MKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVVPL--AGDA--VRIRSCT  155 (194)
Q Consensus        81 g~~hiaf~v~dl~~~~~~l~~-~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~~~p~~p~--~~~~--~~~~~~~  155 (194)
                      ++.|+++.|.|+++..+...+ .|.++........+ ....+++.  +|..++|.+.......++  ...+  .+.+.+.
T Consensus         5 ~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~~~~-~~~~~~~~--~~~~l~l~~~~~~~~~~~~~~~~g~~h~~f~v~   81 (136)
T 2rk0_A            5 GVSHVSLTVRDLDISCRWYTEILDWKELVRGRGDTT-SFAHGVLP--GGLSIVLREHDGGGTDLFDETRPGLDHLSFSVE   81 (136)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEEEEEEECSSE-EEEEEECT--TSCEEEEEEETTCSSSCCCTTSSEEEEEEEEES
T ss_pred             cccEEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCC-ceEEEEEc--CCCEEEEEeCCCCcccCCCCCCCCcceEEEEeC
Confidence            568999999999999999876 79987754321111 11333444  789999998654211111  1222  3445554


Q ss_pred             cccchhhhhhhhhh
Q 029385          156 STVNCNFHQQQIQQ  169 (194)
Q Consensus       156 ~~~~~~~~~~~~~~  169 (194)
                      ++-|++...+++..
T Consensus        82 ~~~d~~~~~~~l~~   95 (136)
T 2rk0_A           82 SMTDLDVLEERLAK   95 (136)
T ss_dssp             SHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHH
Confidence            44678888877664

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium}

Probab=91.51  E-value=1.4  Score=30.60  Aligned_cols=80  Identities=4%  Similarity=-0.054  Sum_probs=52.8

Q ss_pred             CCccEEEEeeCCHHHHHHHHHh-CCCeEEccceecCccceEEEEEeCCCCCEEEEEecCCCCcCcCCCcchhhccccccc
Q 029385           80 PKDNHISFQCENMAIVERRLKE-MKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVVPLAGDAVRIRSCTSTV  158 (194)
Q Consensus        80 ~g~~hiaf~v~dl~~~~~~l~~-~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~~~p~~p~~~~~~~~~~~~~~~  158 (194)
                      .++.|+++.|.|+++..+...+ .|.++.... ....   ..++..+..+..+++.+....  .   ....+.+.+ ..-
T Consensus        27 ~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~-~~~~---~~~~~~~~~~~~l~l~~~~~~--~---~~~h~~~~v-~~~   96 (141)
T 3ghj_A           27 KGLFEVAVKVKNLEKSSQFYTEILGFEAGLLD-SARR---WNFLWVSGRAGMVVLQEEKEN--W---QQQHFSFRV-EKS   96 (141)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHTSCCEEEEEE-TTTT---EEEEEETTTTEEEEEEECCSS--C---CCCEEEEEE-CGG
T ss_pred             ceecEEEEEeCCHHHHHHHHHHhcCCEEEEec-CCCc---EEEEEecCCCcEEEEeccCCC--C---CCceEEEEE-eHH
Confidence            4789999999999999999975 799877643 1111   233334446788999876321  1   112344555 345


Q ss_pred             chhhhhhhhhh
Q 029385          159 NCNFHQQQIQQ  169 (194)
Q Consensus       159 ~~~~~~~~~~~  169 (194)
                      |++...+++..
T Consensus        97 dld~~~~~l~~  107 (141)
T 3ghj_A           97 EIEPLKKALES  107 (141)
T ss_dssp             GHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            88888888764

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A*

Probab=91.41  E-value=0.57  Score=32.18  Aligned_cols=83  Identities=10%  Similarity=-0.040  Sum_probs=52.2

Q ss_pred             CCccEEEEeeCCHHHHHHHHHh-CCCeEEccceecCccceEEEEEeCCCCCEEEEEecCCCCcCcCCCcchhhccccccc
Q 029385           80 PKDNHISFQCENMAIVERRLKE-MKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVVPLAGDAVRIRSCTSTV  158 (194)
Q Consensus        80 ~g~~hiaf~v~dl~~~~~~l~~-~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~~~p~~p~~~~~~~~~~~~~~~  158 (194)
                      .++.|+.+.|.|+++..+..++ .|.++....   +    ....+...+|..+.+.........+......+.+.+.+.-
T Consensus        12 ~~i~~v~l~v~D~~~s~~FY~~~lG~~~~~~~---~----~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~v~~~~   84 (132)
T 3sk2_A           12 ITPNLQLVYVSNVERSTDFYRFIFKKEPVFVT---P----RYVAFPSSGDALFAIWSGGEEPVAEIPRFSEIGIMLPTGE   84 (132)
T ss_dssp             CCCCEEEEECSCHHHHHHHHHHHHTCCCSEEC---S----SEEEEECSTTCEEEEESSSCCCCTTSCCCEEEEEEESSHH
T ss_pred             ceeeEEEEEECCHHHHHHHHHHHcCCeEEEcC---C----CEEEEEcCCCcEEEEEeCCCCCcCCCCCcceEEEEeCCHH
Confidence            5789999999999999998886 688765422   2    2334565678899998754211111111122445553334


Q ss_pred             chhhhhhhhhh
Q 029385          159 NCNFHQQQIQQ  169 (194)
Q Consensus       159 ~~~~~~~~~~~  169 (194)
                      |++...+++..
T Consensus        85 dv~~~~~~l~~   95 (132)
T 3sk2_A           85 DVDKLFNEWTK   95 (132)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHh
Confidence            57888877765

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A*

Probab=91.27  E-value=1.4  Score=31.97  Aligned_cols=87  Identities=5%  Similarity=-0.068  Sum_probs=54.7

Q ss_pred             CCCccEEEEeeCCHHHHHHHHHh-CCCeEEccceecCccceEEEEEeCCC------------------CCEEEEEecCC-
Q 029385           79 NPKDNHISFQCENMAIVERRLKE-MKIDYVKSRVEEGGINVDQLFFHDPD------------------GSMIEICNCDV-  138 (194)
Q Consensus        79 ~~g~~hiaf~v~dl~~~~~~l~~-~Gi~~~~~~~~~~g~~~~~~~~~DPD------------------G~~iEi~~~~~-  138 (194)
                      ..++.|+++.|.|+++..+...+ .|.++...... .+.....+++..++                  |..|+|.+... 
T Consensus        29 ~~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~L~~~~~~  107 (184)
T 2za0_A           29 DFLLQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDF-PAMKFSLYFLAYEDKNDIPKDKSEKTAWTFSRKATLELTHNWGT  107 (184)
T ss_dssp             TCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEE-GGGTEEEEEEESCCGGGSCSSHHHHHHHHTTSSSEEEEEEETTG
T ss_pred             ceeEEEEEEEeCCHHHHHHHHHHhcCCEEEEeccC-CCCCceeEEecccccccCCcccchheeeecCCCceEEEEecCCC
Confidence            45789999999999999999986 79987754321 12122445555543                  67999987532 


Q ss_pred             --CCcCcC-------CCcchhhcccccccchhhhhhhhhh
Q 029385          139 --LPVVPL-------AGDAVRIRSCTSTVNCNFHQQQIQQ  169 (194)
Q Consensus       139 --~p~~p~-------~~~~~~~~~~~~~~~~~~~~~~~~~  169 (194)
                        .+..++       .....+.+.+   -|++...+++..
T Consensus       108 ~~~~~~~~~~~~~~~~g~~hi~f~v---~dvd~~~~~l~~  144 (184)
T 2za0_A          108 EDDETQSYHNGNSDPRGFGHIGIAV---PDVYSACKRFEE  144 (184)
T ss_dssp             GGCTTCCCCCSSSSSCCEEEEEEEC---SCHHHHHHHHHH
T ss_pred             CCCcccccccCCCCCCCeeEEEEEe---CCHHHHHHHHHH
Confidence              122211       1112455556   478888877663

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans}

Probab=90.65  E-value=0.63  Score=33.28  Aligned_cols=84  Identities=15%  Similarity=0.111  Sum_probs=53.9

Q ss_pred             CCccEEEEeeCCHHHHHHHHHh-CCCeEEccceecCccceEEEEEeCCCCCEEEEEecCCCCcCcC------CCcc--hh
Q 029385           80 PKDNHISFQCENMAIVERRLKE-MKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVVPL------AGDA--VR  150 (194)
Q Consensus        80 ~g~~hiaf~v~dl~~~~~~l~~-~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~~~p~~p~------~~~~--~~  150 (194)
                      .++.|+++.|.|+++..+...+ .|.++....... ..+.+..++.. .|..+|+.+..... .+.      ...|  .+
T Consensus         7 ~~i~Hv~l~V~Dl~~a~~FY~~~LG~~~~~~~~~~-~~~~~~~~~~~-g~~~l~l~~~~~~~-~~~~~~~~~~~~g~~Hi   83 (161)
T 3oa4_A            7 NKLDHIGIAVTSIKDVLPFYVGSLKLKLLGMEDLP-SQGVKIAFLEI-GESKIELLEPLSEE-SPIAKFIQKRGEGIHHI   83 (161)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEEG-GGTEEEEEEEE-TTEEEEEEEESSTT-SHHHHHHHHHCSEEEEE
T ss_pred             CcCCEEEEEECCHHHHHHHHHHccCCeEeeeeccC-CCCeEEEEEeC-CCeEEEEEeECCCC-ChHHHHhhcCCCCeEEE
Confidence            4789999999999999999997 899877643211 12235555554 56789998864322 111      0112  24


Q ss_pred             hcccccccchhhhhhhhhh
Q 029385          151 IRSCTSTVNCNFHQQQIQQ  169 (194)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~  169 (194)
                      .+.+   -|++...+++..
T Consensus        84 af~V---~Did~~~~~l~~   99 (161)
T 3oa4_A           84 AIGV---KSIEERIQEVKE   99 (161)
T ss_dssp             EEEC---SCHHHHHHHHHH
T ss_pred             EEEE---CCHHHHHHHHHH
Confidence            4555   477788777764

>3vw9_A Lactoylglutathione lyase; glyoxalase, lyase-lyase inhibitor complex; HET: EPE HPJ; 1.47A {Homo sapiens} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* 2za0_A*

Probab=90.34  E-value=2.3  Score=30.85  Aligned_cols=89  Identities=4%  Similarity=-0.078  Sum_probs=56.8

Q ss_pred             CCCCCccEEEEeeCCHHHHHHHHH-hCCCeEEccceecCccceEEEEEeCCCC------------------CEEEEEecC
Q 029385           77 NINPKDNHISFQCENMAIVERRLK-EMKIDYVKSRVEEGGINVDQLFFHDPDG------------------SMIEICNCD  137 (194)
Q Consensus        77 ~~~~g~~hiaf~v~dl~~~~~~l~-~~Gi~~~~~~~~~~g~~~~~~~~~DPDG------------------~~iEi~~~~  137 (194)
                      ...-.+.|+++.|.|+++..+... -.|.++........ .....+++..+++                  ..+|+....
T Consensus        30 ~~~~~l~Hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~  108 (187)
T 3vw9_A           30 TKDFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPI-MKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNW  108 (187)
T ss_dssp             GTTCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETT-TTEEEEEEESCCGGGSCSSHHHHHHHHTTCSSEEEEEEET
T ss_pred             cceeEEEEEEEEeCCHHHHHHHHHHhcCcEEeeccccCC-CceeEEEecCCCcccccccccchhhhcccCCceEEEEEec
Confidence            334678999999999999999996 57998876443222 2236667777664                  789997643


Q ss_pred             CCC---cCcCC-------Ccchhhcccccccchhhhhhhhhh
Q 029385          138 VLP---VVPLA-------GDAVRIRSCTSTVNCNFHQQQIQQ  169 (194)
Q Consensus       138 ~~p---~~p~~-------~~~~~~~~~~~~~~~~~~~~~~~~  169 (194)
                      ...   ..++.       ....+...+   -|++...+++..
T Consensus       109 ~~~~~~~~~~~~g~~~~~g~~hl~f~v---~dv~~~~~~l~~  147 (187)
T 3vw9_A          109 GTEDDETQSYHNGNSDPRGFGHIGIAV---PDVYSACKRFEE  147 (187)
T ss_dssp             TGGGCTTCCCCCSSSSSCBEEEEEEEC---SCHHHHHHHHHH
T ss_pred             CCCCCCccccccCCCCCCceeEEEEEE---CCHHHHHHHHHH
Confidence            211   11111       112445556   378888887764

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A

Probab=89.90  E-value=1.4  Score=30.38  Aligned_cols=85  Identities=5%  Similarity=0.040  Sum_probs=55.0

Q ss_pred             CCccEEEEeeCCHHHHHHHHHh-CCCeEEccceecCccceEEEEEeCCCC-----CEEEEEecCCCCcCc------CCC-
Q 029385           80 PKDNHISFQCENMAIVERRLKE-MKIDYVKSRVEEGGINVDQLFFHDPDG-----SMIEICNCDVLPVVP------LAG-  146 (194)
Q Consensus        80 ~g~~hiaf~v~dl~~~~~~l~~-~Gi~~~~~~~~~~g~~~~~~~~~DPDG-----~~iEi~~~~~~p~~p------~~~-  146 (194)
                      .++.|+++.|.|+++..+...+ .|.++...... ...+.+..++..+++     ..++|.+..... .|      -.. 
T Consensus         8 ~~~~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~l~l~~~~~~~-~~~~~~~~~~~~   85 (148)
T 1jc4_A            8 ICIDHVAYACPDADEASKYYQETFGWHELHREEN-PEQGVVEIMMAPAAKLTEHMTQVQVMAPLNDE-STVAKWLAKHNG   85 (148)
T ss_dssp             SEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEE-TTTTEEEEEEESSSSCCTTCCEEEEEEESSTT-SHHHHHHHHTTT
T ss_pred             ceeeEEEEEeCCHHHHHHHHHHccCceeeecccC-CCCCeEEEEEEcCCCCcCcceEEEEeecCCCC-ChHHHHHHhCCC
Confidence            4788999999999999999884 79987654321 111235677777776     889999864321 11      011 


Q ss_pred             -cc--hhhcccccccchhhhhhhhhh
Q 029385          147 -DA--VRIRSCTSTVNCNFHQQQIQQ  169 (194)
Q Consensus       147 -~~--~~~~~~~~~~~~~~~~~~~~~  169 (194)
                       .+  .+...+   -|++...+++..
T Consensus        86 ~~g~~h~~~~v---~d~~~~~~~l~~  108 (148)
T 1jc4_A           86 RAGLHHMAWRV---DDIDAVSATLRE  108 (148)
T ss_dssp             CCEEEEEEEEC---SCHHHHHHHHHH
T ss_pred             CCceEEEEEEC---CCHHHHHHHHHH
Confidence             12  345555   467777777654

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A*

Probab=89.42  E-value=1.7  Score=29.84  Aligned_cols=84  Identities=7%  Similarity=-0.011  Sum_probs=52.2

Q ss_pred             CccEEEEeeCCHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEecCC----CCcC-cC--CCcchhhcc
Q 029385           81 KDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV----LPVV-PL--AGDAVRIRS  153 (194)
Q Consensus        81 g~~hiaf~v~dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~~----~p~~-p~--~~~~~~~~~  153 (194)
                      ++.|+.+.|.|+++..+..++.|.++.... ...    ....+.-++|..+++.....    .|.. +-  .....+.+.
T Consensus         4 ~l~hv~l~v~D~~~a~~FY~~LG~~~~~~~-~~~----~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~l~f~   78 (138)
T 2a4x_A            4 RISLFAVVVEDMAKSLEFYRKLGVEIPAEA-DSA----PHTEAVLDGGIRLAWDTVETVRSYDPEWQAPTGGHRFAIAFE   78 (138)
T ss_dssp             EEEEEEEEESCHHHHHHHHHTTTCCCCGGG-GGC----SEEEEECTTSCEEEEEEHHHHHHHCTTCCCCBSSCSEEEEEE
T ss_pred             eeeEEEEEECCHHHHHHHHHHcCCcEEecC-CCC----ceEEEEcCCCeEEEEecCccchhhCcccCCCCCCCeEEEEEE
Confidence            578999999999999999888998876543 111    23344446788899986321    0111 11  111235555


Q ss_pred             cccccchhhhhhhhhh
Q 029385          154 CTSTVNCNFHQQQIQQ  169 (194)
Q Consensus       154 ~~~~~~~~~~~~~~~~  169 (194)
                      +.++-|++...+++..
T Consensus        79 v~~~~dv~~~~~~l~~   94 (138)
T 2a4x_A           79 FPDTASVDKKYAELVD   94 (138)
T ss_dssp             CSSHHHHHHHHHHHHH
T ss_pred             eCCHHHHHHHHHHHHH
Confidence            6334478888887764

>3p8a_A Uncharacterized protein; mainly antiparallel beta sheets, alpha and beta protein, UNK function; HET: MSE BTB PG4; 1.95A {Staphylococcus aureus}

Probab=89.04  E-value=1.3  Score=35.37  Aligned_cols=38  Identities=3%  Similarity=-0.039  Sum_probs=33.6

Q ss_pred             CCcccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCC
Q 029385            7 NPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPG   44 (194)
Q Consensus         7 ~~~~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~   44 (194)
                      .+-...+|.+|.+.+.|.+++++.|+++||.....+.+
T Consensus       184 HpnGa~gI~~vvi~~~dp~~~~~~~~~l~g~~~~~~~~  221 (274)
T 3p8a_A          184 YFQKQFSIETVIVKSKNRSQTVSNWLKWFDMDIVEEND  221 (274)
T ss_dssp             TCCTTEEEEEEEEEETTHHHHHHHHHHHHCCEEEEECS
T ss_pred             CCCccceEEEEEEEeCCHHHHHHHHHHHhCCCccccCC
Confidence            44568899999999999999999999999999887763

>3opy_A 6-phosphofructo-1-kinase alpha-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}

Probab=88.58  E-value=2.4  Score=39.82  Aligned_cols=52  Identities=15%  Similarity=0.332  Sum_probs=38.2

Q ss_pred             ccEEEEeeCCHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEecCC
Q 029385           82 DNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV  138 (194)
Q Consensus        82 ~~hiaf~v~dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~~  138 (194)
                      ...+.|.+.|+..+.+.|.+..+...  +.+   ..-..+|..||=||.|-+....+
T Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~---~~~~~~~~~dp~~~~~~~~~~~~  175 (989)
T 3opy_A          124 PGEVTFFTASIDKLKAKLIEIGAEII--PSK---IDLVEFSTRDPMGDVISFSSYPS  175 (989)
T ss_dssp             SCEEEEECSCHHHHHHHHHHSSCCBC--CCC-----CCCEEEESSSEEEEECCSSSC
T ss_pred             cceEEEEeCcHHHHHHHhhhcccccC--CCC---CCceeEEEecCCCCEEeeecCCC
Confidence            35799999999999999998732221  111   11257899999999999987664

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygen virulence, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A

Probab=87.10  E-value=1.6  Score=30.43  Aligned_cols=80  Identities=11%  Similarity=0.064  Sum_probs=49.8

Q ss_pred             CCccEEEEeeCCHHHHHHHHHh-CCCeEEccceecCccceEEEEEeCCCCCEEEEEecCCC--CcCcCCCcc--hhhccc
Q 029385           80 PKDNHISFQCENMAIVERRLKE-MKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVL--PVVPLAGDA--VRIRSC  154 (194)
Q Consensus        80 ~g~~hiaf~v~dl~~~~~~l~~-~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~~~--p~~p~~~~~--~~~~~~  154 (194)
                      .++.|+++.|.|+++..+...+ .|.++....   .+    ..++.- +|..+++......  +..+....+  .+.+.+
T Consensus        22 ~~l~hv~l~v~D~~~a~~FY~~vLG~~~~~~~---~~----~~~l~~-~~~~l~l~~~~~~~~~~~~~~~~g~~hi~f~~   93 (152)
T 3huh_A           22 DRIDHLVLTVSDISTTIRFYEEVLGFSAVTFK---QN----RKALIF-GAQKINLHQQEMEFEPKASRPTPGSADLCFIT   93 (152)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHHTTCCEEEEET---TT----EEEEEE-TTEEEEEEETTBCCSSCCSSCCTTCCEEEEEE
T ss_pred             ceeeEEEEEeCCHHHHHHHHHhcCCCEEEEcc---CC----eEEEEe-CCeEEEEeccCCcCCCcCcCCCCCccEEEEEe
Confidence            3688999999999999999998 899987642   22    223332 4578888875431  111111112  233333


Q ss_pred             ccccchhhhhhhhhh
Q 029385          155 TSTVNCNFHQQQIQQ  169 (194)
Q Consensus       155 ~~~~~~~~~~~~~~~  169 (194)
                        .-|++...+++..
T Consensus        94 --~~dl~~~~~~l~~  106 (152)
T 3huh_A           94 --STPINDVVSEILQ  106 (152)
T ss_dssp             --SSCHHHHHHHHHH
T ss_pred             --cCCHHHHHHHHHH
Confidence              2388888888764

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi}

Probab=86.17  E-value=1.9  Score=30.20  Aligned_cols=81  Identities=10%  Similarity=0.119  Sum_probs=50.8

Q ss_pred             CccEEEEeeCCHHHHHHHHHh-CCCeEEccceecCccceEEEEEeCCCCCEEEEEecCC------CCcCcCCCcchhhcc
Q 029385           81 KDNHISFQCENMAIVERRLKE-MKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV------LPVVPLAGDAVRIRS  153 (194)
Q Consensus        81 g~~hiaf~v~dl~~~~~~l~~-~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~~------~p~~p~~~~~~~~~~  153 (194)
                      ++.|+.+.|.|+++..+..++ .|.++....   +    ...++.. +|..++|.+...      .+..+-.....+.+.
T Consensus         5 ~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~---~----~~~~~~~-~~~~l~l~~~~~~~~~~~~~~~~~~~~~~l~f~   76 (150)
T 3bqx_A            5 QVAVITLGIGDLEASARFYGEGFGWAPVFRN---P----EIIFYQM-NGFVLATWLVQNLQEDVGVAVTSRPGSMALAHN   76 (150)
T ss_dssp             CCCEEEEEESCHHHHHHHHHHTSCCCCSEEC---S----SEEEEEC-SSSEEEEEEHHHHHHHHSSCCCSSCCSCEEEEE
T ss_pred             ceEEEEEEcCCHHHHHHHHHHhcCCEeecCC---C----CEEEEEc-CCEEEEEEeccccccccCCCCCCCCCeEEEEEE
Confidence            678999999999999999986 798765432   2    2344544 688899987531      111111111123444


Q ss_pred             cccccchhhhhhhhhh
Q 029385          154 CTSTVNCNFHQQQIQQ  169 (194)
Q Consensus       154 ~~~~~~~~~~~~~~~~  169 (194)
                      +.+.-|++...+++..
T Consensus        77 v~~~~dv~~~~~~l~~   92 (150)
T 3bqx_A           77 VRAETEVAPLMERLVA   92 (150)
T ss_dssp             CSSGGGHHHHHHHHHH
T ss_pred             eCCHHHHHHHHHHHHH
Confidence            4345678888777653

>4hc5_A Glyoxalase/bleomycin resistance protein/dioxygena; MCSG, GEBA genomes, structural genomics, midwest center for structural genomics; HET: MSE GOL; 1.45A {Sphaerobacter thermophilus}

Probab=85.89  E-value=5.7  Score=26.40  Aligned_cols=85  Identities=5%  Similarity=-0.089  Sum_probs=52.9

Q ss_pred             CCCccEEEEeeCCHHHHHHHHH-hCCCeEEccceecCccceEEEEEeCCC-CCEEEEEecCC--CCcCcCCCcchhhccc
Q 029385           79 NPKDNHISFQCENMAIVERRLK-EMKIDYVKSRVEEGGINVDQLFFHDPD-GSMIEICNCDV--LPVVPLAGDAVRIRSC  154 (194)
Q Consensus        79 ~~g~~hiaf~v~dl~~~~~~l~-~~Gi~~~~~~~~~~g~~~~~~~~~DPD-G~~iEi~~~~~--~p~~p~~~~~~~~~~~  154 (194)
                      ..++.|+.+.|.|+++..+... -.|.++........+  ...+.+..++ +..+++.....  .+..+ .....+.+.+
T Consensus        11 ~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~--~~~~~~~~~~~~~~l~l~~~~~~~~~~~~-~~~~~~~~~v   87 (133)
T 4hc5_A           11 IAYVHSATIIVSDQEKALDFYVNTLGFEKVFDNQLDPN--MRFVTVVPPGAQTQVALGLPSWYEDGRKP-GGYTGISLIT   87 (133)
T ss_dssp             CCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEETT--EEEEEEECTTCSCEEEEECGGGCSSCCCS-CEEEEEEEEE
T ss_pred             ccceeEEEEEECCHHHHHHHHHhCcCCcEeeecccCCC--ceEEEEECCCCceEEEEecCcccccccCC-CCeEEEEEEe
Confidence            3478999999999999999996 479988764422222  2445555554 45688876532  11111 1122345555


Q ss_pred             ccccchhhhhhhhhh
Q 029385          155 TSTVNCNFHQQQIQQ  169 (194)
Q Consensus       155 ~~~~~~~~~~~~~~~  169 (194)
                         -|++...+++..
T Consensus        88 ---~d~~~~~~~l~~   99 (133)
T 4hc5_A           88 ---RDIDEAYKTLTE   99 (133)
T ss_dssp             ---SCHHHHHHHHHH
T ss_pred             ---CCHHHHHHHHHH
Confidence               577777777663

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2

Probab=85.25  E-value=3.9  Score=27.96  Aligned_cols=83  Identities=11%  Similarity=0.098  Sum_probs=49.5

Q ss_pred             CccEEEEeeCCHHHHHHHHHh-CCCeEEccceecCccc-eEEEEEeCCCCCEEEEEecCCCCcCcCCCcchhhccccccc
Q 029385           81 KDNHISFQCENMAIVERRLKE-MKIDYVKSRVEEGGIN-VDQLFFHDPDGSMIEICNCDVLPVVPLAGDAVRIRSCTSTV  158 (194)
Q Consensus        81 g~~hiaf~v~dl~~~~~~l~~-~Gi~~~~~~~~~~g~~-~~~~~~~DPDG~~iEi~~~~~~p~~p~~~~~~~~~~~~~~~  158 (194)
                      ++.|+.+.|.|+++..+...+ .|.++...... .... ....++.- +|..+++.+.+..|   -.....+.+.+.+ -
T Consensus         4 ~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~-~~~~~~~~~~~~~-g~~~l~l~~~~~~~---~~~~~h~~~~v~~-~   77 (139)
T 1r9c_A            4 GLSHMTFIVRDLERMTRILEGVFDAREVYASDT-EQFSLSREKFFLI-GDIWVAIMQGEKLA---ERSYNHIAFKIDD-A   77 (139)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHHHCCEEEEEGGG-STTCCSCEEEEEE-TTEEEEEEECCCCS---SCCSCEEEEECCG-G
T ss_pred             eEEEEEEEeCCHHHHHHHHHHhhCCEEeecCCC-ccccccceEEEEE-CCEEEEEEeCCCCC---CCCeeEEEEEcCH-H
Confidence            578999999999999999876 79987653311 1110 01113332 57788888754332   1122234455522 4


Q ss_pred             chhhhhhhhhh
Q 029385          159 NCNFHQQQIQQ  169 (194)
Q Consensus       159 ~~~~~~~~~~~  169 (194)
                      |++...+++..
T Consensus        78 d~~~~~~~l~~   88 (139)
T 1r9c_A           78 DFDRYAERVGK   88 (139)
T ss_dssp             GHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            78888777653

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens}

Probab=85.24  E-value=3.1  Score=28.98  Aligned_cols=82  Identities=10%  Similarity=0.053  Sum_probs=51.1

Q ss_pred             CccEEEEeeCCHHHHHHHHHh-CCCeEEccceecCccceEEEEEeCCCCCEEEEEecCCCCcCcC--CCcchhhcccccc
Q 029385           81 KDNHISFQCENMAIVERRLKE-MKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVVPL--AGDAVRIRSCTST  157 (194)
Q Consensus        81 g~~hiaf~v~dl~~~~~~l~~-~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~~~p~~p~--~~~~~~~~~~~~~  157 (194)
                      ++.|+.+.|.|+++..+..++ .|.++....   ++    ..++.-++|..++|.........+-  .....+.+.+.++
T Consensus        25 ~l~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~---~~----~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~hl~f~v~d~   97 (144)
T 2kjz_A           25 HPDFTILYVDNPPASTQFYKALLGVDPVESS---PT----FSLFVLANGMKLGLWSRHTVEPKASVTGGGGELAFRVEND   97 (144)
T ss_dssp             CCCEEEEEESCHHHHHHHHHHHHTCCCSEEE---TT----EEEEECTTSCEEEEEETTSCSSCCCCSSSSCEEEEECSSH
T ss_pred             ceeEEEEEeCCHHHHHHHHHHccCCEeccCC---CC----eEEEEcCCCcEEEEEeCCCCCCccCCCCCceEEEEEeCCH
Confidence            788999999999999998886 688765422   22    2345555688899987543211111  1112344555333


Q ss_pred             cchhhhhhhhhh
Q 029385          158 VNCNFHQQQIQQ  169 (194)
Q Consensus       158 ~~~~~~~~~~~~  169 (194)
                      -|++...+++..
T Consensus        98 ~dv~~~~~~l~~  109 (144)
T 2kjz_A           98 AQVDETFAGWKA  109 (144)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            467777777754

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila}

Probab=84.82  E-value=3  Score=29.34  Aligned_cols=82  Identities=15%  Similarity=0.078  Sum_probs=51.4

Q ss_pred             CccEEEEeeCCHHHHHHHHHh-CCCeEEccceecCccceEEEEEeCCCCCEEEEEecCCCCcCcC--CCcchhhcccccc
Q 029385           81 KDNHISFQCENMAIVERRLKE-MKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVVPL--AGDAVRIRSCTST  157 (194)
Q Consensus        81 g~~hiaf~v~dl~~~~~~l~~-~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~~~p~~p~--~~~~~~~~~~~~~  157 (194)
                      ++.|+.+.|.|+++..+...+ .|.++....   +    ...++.-++|..+.+.........+-  .....+.+.+.++
T Consensus         6 ~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~---~----~~~~~~~~~g~~l~l~~~~~~~~~~~~~~~~~~l~f~v~d~   78 (148)
T 3rhe_A            6 DPNLVLFYVKNPAKSEEFYKNLLDTQPIESS---P----TFAMFVMKTGLRLGLWAQEEIEPKAHQTGGGMELSFQVNSN   78 (148)
T ss_dssp             -CEEEEEEESCHHHHHHHHHHHHTCCCSEEC---S----SEEEEECTTSCEEEEEEGGGCSSCCC----CEEEEEECSCH
T ss_pred             cccEEEEEeCCHHHHHHHHHHHcCCEEeccC---C----CEEEEEcCCCcEEEEecCCcCCccccCCCCeEEEEEEcCCH
Confidence            678999999999999998886 788765432   2    23456656899999987543221111  1122344555333


Q ss_pred             cchhhhhhhhhh
Q 029385          158 VNCNFHQQQIQQ  169 (194)
Q Consensus       158 ~~~~~~~~~~~~  169 (194)
                      -|++...+++..
T Consensus        79 ~dvd~~~~~l~~   90 (148)
T 3rhe_A           79 EMVDEIHRQWSD   90 (148)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHh
Confidence            457777777653

>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp}

Probab=84.62  E-value=2.8  Score=28.37  Aligned_cols=81  Identities=5%  Similarity=-0.128  Sum_probs=47.1

Q ss_pred             CCccEEEEeeCCHHHHHHHHHh-CCCeEEccceecCccceEEEEEeCCCCCEEEEEecCCCCcCc-CCCcchhhcccccc
Q 029385           80 PKDNHISFQCENMAIVERRLKE-MKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVVP-LAGDAVRIRSCTST  157 (194)
Q Consensus        80 ~g~~hiaf~v~dl~~~~~~l~~-~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~~~p~~p-~~~~~~~~~~~~~~  157 (194)
                      .++.|+++.|.|++++.+...+ .|.++....   .+    .+++. ..|..+.+..... +..| -.....+......+
T Consensus         8 ~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~---~~----~~~~~-~~g~~~~l~~~~~-~~~~~~~~~~h~~~~~~~~   78 (135)
T 3rri_A            8 NDVFHLAIPARDLDEAYDFYVTKLGCKLARRY---PD----RITLD-FFGDQLVCHLSDR-WDREVSMYPRHFGITFRDK   78 (135)
T ss_dssp             TSEEEEEEEESCHHHHHHHHTTTTCCEEEEEE---TT----EEEEE-ETTEEEEEEECSC-SCSSCCSSSCEEEEECSSH
T ss_pred             CccceEEEEcCCHHHHHHHHHHhcCCEeeccC---CC----cEEEE-EeCCEEEEEEcCc-ccccCCCCCCeEEEEEcCh
Confidence            4789999999999999999975 799885432   22    22333 2344466655332 1111 11112233444223


Q ss_pred             cchhhhhhhhhh
Q 029385          158 VNCNFHQQQIQQ  169 (194)
Q Consensus       158 ~~~~~~~~~~~~  169 (194)
                      -|++...++++.
T Consensus        79 ~d~~~~~~~l~~   90 (135)
T 3rri_A           79 KHFDNLYKLAKQ   90 (135)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HhHHHHHHHHHH
Confidence            567788888764

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125}

Probab=84.61  E-value=6.7  Score=27.23  Aligned_cols=83  Identities=7%  Similarity=0.043  Sum_probs=51.6

Q ss_pred             CCCccEEEEeeCCHHHHHHHH----HhCCCeEEccceecCccceEEEEEeCCCCCEEEEEecCC-CCcCcC--CCc--ch
Q 029385           79 NPKDNHISFQCENMAIVERRL----KEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV-LPVVPL--AGD--AV  149 (194)
Q Consensus        79 ~~g~~hiaf~v~dl~~~~~~l----~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~~-~p~~p~--~~~--~~  149 (194)
                      ..++.|+++.|.|+++..+..    ...|.++....   ...  . .|+.  +|..++|.+... .+..|.  ...  ..
T Consensus        18 ~~~i~hv~l~v~Dl~~a~~FY~~~~~~LG~~~~~~~---~~~--~-~~~~--g~~~l~l~~~~~~~~~~~~~~~~~g~~h   89 (146)
T 3ct8_A           18 QGMLHHVEINVDHLEESIAFWDWLLGELGYEDYQSW---SRG--K-SYKH--GKTYLVFVQTEDRFQTPTFHRKRTGLNH   89 (146)
T ss_dssp             TTSCCEEEEEESCHHHHHHHHHHHHHHTTCEEEEEE---TTE--E-EEEE--TTEEEEEEECCGGGSCSCCCTTSSSCCE
T ss_pred             ccceeEEEEEeCCHHHHHHHHHhhhhhCCCEEEEec---CCC--c-eEec--CCeEEEEEEcCCCcccccccccCCCceE
Confidence            357899999999999999988    46899876532   111  2 3555  677899987643 111121  111  23


Q ss_pred             hhcccccccchhhhhhhhhh
Q 029385          150 RIRSCTSTVNCNFHQQQIQQ  169 (194)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~  169 (194)
                      +.+.+.++-|++...+++..
T Consensus        90 i~f~v~~~~dv~~~~~~l~~  109 (146)
T 3ct8_A           90 LAFHAASREKVDELTQKLKE  109 (146)
T ss_dssp             EEEECSCHHHHHHHHHHHHH
T ss_pred             EEEECCCHHHHHHHHHHHHH
Confidence            45555334478888777653

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}

Probab=84.61  E-value=2.3  Score=29.07  Aligned_cols=81  Identities=7%  Similarity=0.027  Sum_probs=49.1

Q ss_pred             CccEEEEeeCCHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEecCCCCcCcCCCcchhhcccccccch
Q 029385           81 KDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVVPLAGDAVRIRSCTSTVNC  160 (194)
Q Consensus        81 g~~hiaf~v~dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~~~p~~p~~~~~~~~~~~~~~~~~  160 (194)
                      .+.|+++.|.|+++..+..++.|.++...... .+   ...++...+|..++|....+.. ......-.+.+.+   -|+
T Consensus         6 ~i~hv~l~v~D~~~a~~FY~~LG~~~~~~~~~-~~---~~~~~~~~~~~~l~l~~~~~~~-~~~~~~~~l~f~v---~dv   77 (128)
T 3g12_A            6 LITSITINTSHLQGMLGFYRIIGFQFTASKVD-KG---SEVHRAVHNGVEFSLYSIQNPQ-RSQIPSLQLGFQI---TDL   77 (128)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHHTCCCEEC---------CCEEEEEETTEEEEEEECCCCS-SCCCCSEEEEEEE---SCH
T ss_pred             eEEEEEEEcCCHHHHHHHHHHCCCEEecccCC-CC---CEEEEEeCCCeEEEEEECCCCc-CCCCCceEEEEEe---CCH
Confidence            57899999999999999888889887654211 11   2334443477788886544311 1111111245566   467


Q ss_pred             hhhhhhhhh
Q 029385          161 NFHQQQIQQ  169 (194)
Q Consensus       161 ~~~~~~~~~  169 (194)
                      +...+++..
T Consensus        78 d~~~~~l~~   86 (128)
T 3g12_A           78 EKTVQELVK   86 (128)
T ss_dssp             HHHHHHHTT
T ss_pred             HHHHHHHHH
Confidence            777777664

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A

Probab=84.16  E-value=4  Score=27.45  Aligned_cols=83  Identities=14%  Similarity=0.110  Sum_probs=48.3

Q ss_pred             CccEEEEeeCCHHHHHHHHHh-CCCeEEccceecCccc-eEEEEEeCCCCCEEEEEecCCCCcCcCCCcchhhccccccc
Q 029385           81 KDNHISFQCENMAIVERRLKE-MKIDYVKSRVEEGGIN-VDQLFFHDPDGSMIEICNCDVLPVVPLAGDAVRIRSCTSTV  158 (194)
Q Consensus        81 g~~hiaf~v~dl~~~~~~l~~-~Gi~~~~~~~~~~g~~-~~~~~~~DPDG~~iEi~~~~~~p~~p~~~~~~~~~~~~~~~  158 (194)
                      ++.|+.+.|.|+++..+...+ .|.++...... .... ....++.- +|..+++......+   -.....+.+.+ ..-
T Consensus         4 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~-~~~~~~~~~~~~~-~~~~l~l~~~~~~~---~~~~~h~~~~v-~~~   77 (133)
T 2p7o_A            4 GLSHITLIVKDLNKTTAFLQNIFNAEEIYSSGD-KTFSLSKEKFFLI-AGLWICIMEGDSLQ---ERTYNHIAFQI-QSE   77 (133)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHHHCCEECC------CCCSSCEEEEEE-TTEEEEEEECSSCC---CCCSCEEEEEC-CGG
T ss_pred             eEEEEEEEcCCHHHHHHHHHHhcCCEEeeecCC-cccccCCceEEEe-CCEEEEEecCCCCC---CCCeeEEEEEc-CHH
Confidence            578999999999999999876 79887653211 1100 01113332 56788888754322   11122344555 334


Q ss_pred             chhhhhhhhhh
Q 029385          159 NCNFHQQQIQQ  169 (194)
Q Consensus       159 ~~~~~~~~~~~  169 (194)
                      |++...+++..
T Consensus        78 d~~~~~~~l~~   88 (133)
T 2p7o_A           78 EVDEYTERIKA   88 (133)
T ss_dssp             GHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            78888877653

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8

Probab=83.46  E-value=8.4  Score=26.16  Aligned_cols=84  Identities=12%  Similarity=0.169  Sum_probs=51.6

Q ss_pred             CccEEEEeeCCHHHHHHHHH-hCCCeEEccceecCccceEEEEEeCCCC-CEEEEEecCCCCcCcCC-Ccchhhcccccc
Q 029385           81 KDNHISFQCENMAIVERRLK-EMKIDYVKSRVEEGGINVDQLFFHDPDG-SMIEICNCDVLPVVPLA-GDAVRIRSCTST  157 (194)
Q Consensus        81 g~~hiaf~v~dl~~~~~~l~-~~Gi~~~~~~~~~~g~~~~~~~~~DPDG-~~iEi~~~~~~p~~p~~-~~~~~~~~~~~~  157 (194)
                      ...||++.|.|+++..+... ..|.++........+  ...+++..+++ ..+++......+..+.. ....+...+   
T Consensus        11 ~~~~i~l~v~Dl~~s~~FY~~~LG~~~~~~~~~~~~--~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~v---   85 (139)
T 1twu_A           11 AQIRIARPTGQLDEIIRFYEEGLCLKRIGEFSQHNG--YDGVMFGLPHADYHLEFTQYEGGSTAPVPHPDSLLVFYV---   85 (139)
T ss_dssp             SCEEEEEECSCHHHHHHHHTTTSCCCEEEEEEEETT--EEEEEEESSSSSEEEEEEEETTCCCCCCCCTTCEEEEEC---
T ss_pred             ceeEEeeEeCCHHHHHHHHHhcCCcEEEEeccCCCC--eeEEEEecCCCceEEEEeecCCCCCCCCCCCccEEEEEe---
Confidence            45789999999999999986 579987654322122  25667777764 46788765433211111 112355556   


Q ss_pred             cch---hhhhhhhhh
Q 029385          158 VNC---NFHQQQIQQ  169 (194)
Q Consensus       158 ~~~---~~~~~~~~~  169 (194)
                      -|+   +...+++..
T Consensus        86 ~d~~~l~~~~~~l~~  100 (139)
T 1twu_A           86 PNAVELAAITSKLKH  100 (139)
T ss_dssp             CCHHHHHHHHHHHHH
T ss_pred             CCcchHHHHHHHHHH
Confidence            355   777777664

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens}

Probab=80.80  E-value=1.4  Score=31.39  Aligned_cols=83  Identities=8%  Similarity=0.127  Sum_probs=50.9

Q ss_pred             CCccEEEEeeCCHHHHHHHHHh-CCCeEEccceecCccceEEEEEeCCCCCEEEEEecCCC--C----cCcC-CCc--ch
Q 029385           80 PKDNHISFQCENMAIVERRLKE-MKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVL--P----VVPL-AGD--AV  149 (194)
Q Consensus        80 ~g~~hiaf~v~dl~~~~~~l~~-~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~~~--p----~~p~-~~~--~~  149 (194)
                      .++.|+++.|.|+++..+...+ .|.++....   .+   ...++.. +|..+++......  |    ..|- ...  ..
T Consensus         7 ~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~---~~---~~~~~~~-g~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~h   79 (160)
T 3r4q_A            7 SAIMETALYADDLDAAEAFYRDVFGLEMVLKL---PG---QLVFFKC-GRQMLLLFDPQESSRADANNPIPRHGAVGQGH   79 (160)
T ss_dssp             SCEEEEEEECSCHHHHHHHHHHHSCCEEEEEE---TT---TEEEEEE-TTEEEEEECHHHHTCCCTTCCSCCCEEEEECE
T ss_pred             ccccEEEEEeCCHHHHHHHHHHhcCCEEEEec---CC---cEEEEeC-CCEEEEEEecCCccCccccCCCCcCCCcceeE
Confidence            4789999999999999999987 899887643   22   2334443 4567777753221  0    0111 111  22


Q ss_pred             hhcccccccchhhhhhhhhh
Q 029385          150 RIRSCTSTVNCNFHQQQIQQ  169 (194)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~  169 (194)
                      +.+.+.++-|++...+++..
T Consensus        80 i~f~V~~~~dld~~~~~l~~   99 (160)
T 3r4q_A           80 FCFYADDKAEVDEWKTRFEA   99 (160)
T ss_dssp             EEEEESSHHHHHHHHHHHHT
T ss_pred             EEEEeCCHHHHHHHHHHHHH
Confidence            44444445677788787764

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila}

Probab=80.64  E-value=6.1  Score=27.68  Aligned_cols=48  Identities=10%  Similarity=-0.018  Sum_probs=33.3

Q ss_pred             CCCCccEEEEeeCCHHHHHHHHHh-CCCeEEccceecCccceEEEEEeCCCC
Q 029385           78 INPKDNHISFQCENMAIVERRLKE-MKIDYVKSRVEEGGINVDQLFFHDPDG  128 (194)
Q Consensus        78 ~~~g~~hiaf~v~dl~~~~~~l~~-~Gi~~~~~~~~~~g~~~~~~~~~DPDG  128 (194)
                      ..-++.|+++.|+|+++..+..++ .|.++...... ++  .+.+.+..+++
T Consensus        23 ~~Mri~~v~I~V~Dle~A~~FY~dvLGf~v~~d~~~-~~--~~~~~~~~~~~   71 (155)
T 4g6x_A           23 NAMRIHLTNVFVDDQAKAESFYTGKLGFLVKADVPV-GA--DRWLTVVSPEA   71 (155)
T ss_dssp             CCCCCCEEEEEESCHHHHHHHHHHTTCCEEEEEEEE-TT--EEEEEEECTTC
T ss_pred             CceEEEEEEEEeCCHHHHHHHHHHHhCCEEEEeecC-CC--ceEEEEeccCC
Confidence            345788999999999999999975 79987654322 22  24555555543

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A*

Probab=80.62  E-value=4.4  Score=26.99  Aligned_cols=80  Identities=8%  Similarity=0.057  Sum_probs=49.9

Q ss_pred             CCccEEEEeeCCHHHHHHHHHh-CCCeEEccceecCccceEEEEEeCCCCCEEEEEecCCC--CcCcCCC--cchhhccc
Q 029385           80 PKDNHISFQCENMAIVERRLKE-MKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVL--PVVPLAG--DAVRIRSC  154 (194)
Q Consensus        80 ~g~~hiaf~v~dl~~~~~~l~~-~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~~~--p~~p~~~--~~~~~~~~  154 (194)
                      .++.|+++.|.|+++..+...+ .|.++....   .+    ..++.- +|..+++......  +..+...  ...+...+
T Consensus         9 ~~i~hi~l~v~D~~~a~~FY~~~lG~~~~~~~---~~----~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v   80 (133)
T 3ey7_A            9 SHLDHLVLTVADIPTTTNFYEKVLGMKAVSFG---AG----RIALEF-GHQKINLHQLGNEFEPKAQNVRVGSADLCFIT   80 (133)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHHHHCCEEEEET---TT----EEEEEE-TTEEEEEEETTSCCSSCCTTCCTTCCEEEEEC
T ss_pred             cccCEEEEEECCHHHHHHHHHHccCceEEEec---CC----eEEEEc-CCEEEEEEcCCCCccccCCCCCCCccEEEEEe
Confidence            4788999999999999999997 799887642   22    223332 4678888875321  1111111  12344555


Q ss_pred             ccccchhhhhhhhhh
Q 029385          155 TSTVNCNFHQQQIQQ  169 (194)
Q Consensus       155 ~~~~~~~~~~~~~~~  169 (194)
                       . -|++...+++..
T Consensus        81 -~-dd~~~~~~~l~~   93 (133)
T 3ey7_A           81 -D-TVLSDAMKHVED   93 (133)
T ss_dssp             -S-SCHHHHHHHHHH
T ss_pred             -C-cHHHHHHHHHHH
Confidence             2 138888888775

>1k4n_A Protein EC4020, protein YECM; structural genomics, A NEW fold of protein, PSI, protein structure initiative; 1.60A {Escherichia coli} SCOP: d.32.1.5

Probab=80.53  E-value=12  Score=28.16  Aligned_cols=75  Identities=12%  Similarity=0.038  Sum_probs=49.2

Q ss_pred             ceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEE-------EeCCcEEEEeecCCCCCCCCCCCCCCCCccE
Q 029385           12 KSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWL-------FNYGMGIHLLKSEEPDNLPKAGKNINPKDNH   84 (194)
Q Consensus        12 ~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~-------~~~g~~~~l~~~~~~~~~~~~~~~~~~g~~h   84 (194)
                      -.++||++.|++.+.+.+|-+..+-.-..-....-...-..+       ...+..+.+++.+.|....    ....|.-|
T Consensus        42 ~~~DHIalRvn~~~~Ae~~~~~l~~~G~llSen~INGRPI~l~~L~qPL~~~~~~I~cvELP~P~~K~----Yp~eGWEH  117 (192)
T 1k4n_A           42 LTADHISLRCHQNATAERWRRGFEQCGELLSENMINGRPICLFKLHEPVQVAHWQFSIVELPWPGEKR----YPHEGWEH  117 (192)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHHTTTEEEEEEEEETTEEEEEEEEEEEEEETTEEEEEEEEECCCSSC----CSSCEEEE
T ss_pred             ccCcEEEEecCCHHHHHHHHHHHHHhchhhhccccCCeeEEEEEcCCCceeCCeEEEEEEcCCCCCCC----CCCCCceE
Confidence            368999999999999999999877653322211111111222       2235678888887765321    34579999


Q ss_pred             EEEeeC
Q 029385           85 ISFQCE   90 (194)
Q Consensus        85 iaf~v~   90 (194)
                      |-|.++
T Consensus       118 IE~Vlp  123 (192)
T 1k4n_A          118 IEIVLP  123 (192)
T ss_dssp             EEEECC
T ss_pred             EEEEec
Confidence            999998

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens}

Probab=80.22  E-value=5.1  Score=27.77  Aligned_cols=82  Identities=6%  Similarity=0.011  Sum_probs=48.1

Q ss_pred             CCccEEEEeeCCHHHHHHHHHh-CCCeEEccceecCccceEEEEEeCCCCCEEEEEecCCC--CcCcCCCcchhhccccc
Q 029385           80 PKDNHISFQCENMAIVERRLKE-MKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVL--PVVPLAGDAVRIRSCTS  156 (194)
Q Consensus        80 ~g~~hiaf~v~dl~~~~~~l~~-~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~~~--p~~p~~~~~~~~~~~~~  156 (194)
                      .++.|+++.|.|+++..+..++ .|.++....   ++   .. ++.- ++..+++......  |.......|.....--.
T Consensus        26 ~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~---~~---~~-~l~~-g~~~l~l~~~~~~~~~~~~~~~~g~~~~~~~~   97 (147)
T 3zw5_A           26 RRLDHIVMTVKSIKDTTMFYSKILGMEVMTFK---ED---RK-ALCF-GDQKFNLHEVGKEFEPKAAHPVPGSLDICLIT   97 (147)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHHHHCCEEEEET---TT---EE-EEEE-TTEEEEEEETTSCCSSCCSSCCTTCCEEEEEC
T ss_pred             ccccEEEEEeCCHHHHHHHHHHhcCCEEEecC---CC---ce-EEEE-CCcEEEEEEcCCCcCcccCCCCCCCceEEEEe
Confidence            4788999999999999999987 799887432   22   22 2222 3457777764321  11111112222222212


Q ss_pred             ccchhhhhhhhhh
Q 029385          157 TVNCNFHQQQIQQ  169 (194)
Q Consensus       157 ~~~~~~~~~~~~~  169 (194)
                      .-|++...+++..
T Consensus        98 ~~dl~~~~~~l~~  110 (147)
T 3zw5_A           98 EVPLEEMIQHLKA  110 (147)
T ss_dssp             SSCHHHHHHHHHH
T ss_pred             ccCHHHHHHHHHH
Confidence            2488888888764

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	194
d1r9ca_	130	d.32.1.2 (A:) Fosfomycin resistance protein FosX {	1e-16
d1qipa_	176	d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lya	2e-16
d1zswa1	144	d.32.1.10 (A:1-144) Hypothetical protein BC1024 {B	8e-16
d1f9za_	135	d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lya	7e-15
d1nkia_	134	d.32.1.2 (A:) Fosfomycin resistance protein A (Fos	3e-14
d1mpya2	162	d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (met	2e-13
d1f1ua2	176	d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxy	3e-13
d1twua_	137	d.32.1.8 (A:) Hypothetical protein YycE {Bacillus	7e-13
d1npba_	140	d.32.1.2 (A:) Fosfomycin resistance protein A (Fos	1e-12
d1mpya1	145	d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metap	4e-12
d1jc4a_	145	d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propion	4e-12
d1ss4a_	149	d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillu	1e-11
d2c21a1	139	d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathion	2e-11
d1zswa2	170	d.32.1.10 (A:145-314) Hypothetical protein BC1024	2e-11
d2i7ra1	115	d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Str	1e-10
d1lgta1	131	d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygena	5e-10
d1f1ua1	146	d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxyge	2e-09
d1kw3b1	132	d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygena	5e-09
d1klla_	128	d.32.1.2 (A:) Mitomycin resistance protein D, MRD	6e-09
d2pjsa1	111	d.32.1.2 (A:3-113) Uncharacterized protein Atu1953	8e-09
d1xrka_	120	d.32.1.2 (A:) Bleomycin resistance protein, BRP {S	1e-08
d1t47a1	163	d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxyg	4e-08
d1xqaa_	113	d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillu	6e-08
d1kw3b2	156	d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxyge	9e-08
d1jifa_	122	d.32.1.2 (A:) Bleomycin resistance protein, BRP {S	3e-07
d1cjxa1	150	d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxyge	9e-06
d1sp8a2	224	d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxy	2e-05
d1ecsa_	120	d.32.1.2 (A:) Bleomycin resistance protein, BRP {K	2e-05
d1sqda1	167	d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxyg	3e-04
d1sqia1	149	d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxyge	4e-04
d1cjxa2	203	d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxy	4e-04
d1sqda2	230	d.32.1.3 (A:181-410) 4-hydroxyphenylpyruvate dioxy	5e-04
d1sp8a1	172	d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxyg	6e-04
d1t47a2	199	d.32.1.3 (A:179-377) 4-hydroxyphenylpyruvate dioxy	7e-04
d1sqia2	210	d.32.1.3 (A:157-366) 4-hydroxyphenylpyruvate dioxy	0.004

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]} Length = 130

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

 Score = 70.3 bits (171), Expect = 1e-16
 Identities = 15/126 (11%), Positives = 40/126 (31%), Gaps = 11/126 (8%)

Query: 11  LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDG---AWLFNYGMGIHLLKSEE 67
           ++ L+H++ + R +E      + V     +    +  F      +     + + +     
Sbjct: 2   IEGLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGDIWVAI----- 56

Query: 68  PDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPD 127
                +     +           +      R+ ++ +D    R    G     ++F+D D
Sbjct: 57  --MQGEKLAERSYNHIAFKIDDADFDRYAERVGKLGLDMRPPRPRVEG-EGRSIYFYDDD 113

Query: 128 GSMIEI 133
             M E+
Sbjct: 114 NHMFEL 119

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.5 bits (174), Expect = 2e-16
 Identities = 29/154 (18%), Positives = 50/154 (32%), Gaps = 27/154 (17%)

Query: 14  LNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNL-- 71
           L    L  +  + SLDFY  VLG   I++        +  F      + +  E+ + +  
Sbjct: 24  LQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAW 83

Query: 72  --------------------PKAGKNINPKDNHISFQCENMAIVER---RLKEMKIDYVK 108
                                ++  N N            +  V     R +E+ + +VK
Sbjct: 84  ALSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVK 143

Query: 109 SRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVV 142
              +         F  DPDG  IEI N + +  +
Sbjct: 144 KPDDGKM--KGLAFIQDPDGYWIEILNPNKMATL 175

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]} Length = 144

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

 Score = 68.9 bits (167), Expect = 8e-16
 Identities = 25/136 (18%), Positives = 45/136 (33%), Gaps = 3/136 (2%)

Query: 11  LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSE---E 67
           +K  +HIS+V ++   +  FY+NVLG   ++   + D    +   YG       +E    
Sbjct: 4   IKGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFF 63

Query: 68  PDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPD 127
              L             I     +   +    +  +   VK        N   L F D +
Sbjct: 64  EIPLVGRTYRGTNAITRIGLLVPSEDSLHYWKERFEKFDVKHSEMTTYANRPALQFEDAE 123

Query: 128 GSMIEICNCDVLPVVP 143
           G  + +   +   V  
Sbjct: 124 GLRLVLLVSNGEKVEH 139

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]} Length = 135

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

 Score = 66.2 bits (160), Expect = 7e-15
 Identities = 27/122 (22%), Positives = 45/122 (36%), Gaps = 1/122 (0%)

Query: 14  LNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWL-FNYGMGIHLLKSEEPDNLP 72
           L H  L    ++ S+DFY  VLG   +R   + ++  +     YG        E   N  
Sbjct: 3   LLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWG 62

Query: 73  KAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIE 132
                +     HI+   +N A    ++++   +  +      G      F  DPDG  IE
Sbjct: 63  VDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIE 122

Query: 133 IC 134
           + 
Sbjct: 123 LI 124

>d1nkia_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Pseudomonas aeruginosa [TaxId: 287]} Length = 134

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 64.1 bits (155), Expect = 3e-14
 Identities = 29/123 (23%), Positives = 48/123 (39%), Gaps = 13/123 (10%)

Query: 11  LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDN 70
           L  LNH++L    + AS+ FY+++LGF    R       GA+L    + + L +  +   
Sbjct: 2   LTGLNHLTLAVADLPASIAFYRDLLGFRLEAR----WDQGAYLELGSLWLCLSREPQYGG 57

Query: 71  LPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSM 130
                 +             + A    +L+   +   K    EG    D  +F DPDG  
Sbjct: 58  PAADYTH-----YAFGIAAADFARFAAQLRAHGVREWKQNRSEG----DSFYFLDPDGHR 108

Query: 131 IEI 133
           +E 
Sbjct: 109 LEA 111

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]} Length = 162

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

 Score = 63.0 bits (152), Expect = 2e-13
 Identities = 18/123 (14%), Positives = 39/123 (31%), Gaps = 10/123 (8%)

Query: 14  LNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNLPK 73
            +H  +    + A+ D +  VLGF+   +    +      F               ++  
Sbjct: 6   FDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTKA-------HDVAF 58

Query: 74  AGKNINPKDNHISFQC---ENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSM 130
                  + +H+SF     E++      +              G  +   ++F DP G+ 
Sbjct: 59  IHHPEKGRLHHVSFHLETWEDLLRAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSGNR 118

Query: 131 IEI 133
            E+
Sbjct: 119 NEV 121

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]} Length = 176

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

 Score = 63.0 bits (152), Expect = 3e-13
 Identities = 27/138 (19%), Positives = 44/138 (31%), Gaps = 14/138 (10%)

Query: 11  LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDN 70
           L  L+H + V   V     + +  LGF         D      + +        +     
Sbjct: 3   LVRLDHFNQVTPDVPRGRAYLE-DLGFRVSEDIKDSDGVTYAAWMHRKQTVHDTALTG-- 59

Query: 71  LPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEE-----GGINVDQLFFHD 125
                    P+ +H++F       + +   +M    +  R+E      G  N   L+  D
Sbjct: 60  ------GNGPRMHHVAFATHEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILD 113

Query: 126 PDGSMIEICNCDVLPVVP 143
           PDG  IEI   D     P
Sbjct: 114 PDGHRIEIYTQDYYTGDP 131

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]} Length = 137

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

 Score = 60.7 bits (146), Expect = 7e-13
 Identities = 21/123 (17%), Positives = 36/123 (29%), Gaps = 3/123 (2%)

Query: 16  HISLVCRSVEASLDFYQNVLGFFPIRRPGSFDF-DGAWLFNYGMGIHLLKSEEPDNLPKA 74
            I+     ++  + FY+  L    I      +  DG          HL  ++        
Sbjct: 12  RIARPTGQLDEIIRFYEEGLCLKRIGEFSQHNGYDGVMFGLPHADYHLEFTQYEGGSTAP 71

Query: 75  GKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEIC 134
             + +            +A +  +LK M    V+S           +   DPDG  I   
Sbjct: 72  VPHPDSLLVFYVPNAVELAAITSKLKHMGYQEVESENPYWSNG--GVTIEDPDGWRIVFM 129

Query: 135 NCD 137
           N  
Sbjct: 130 NSK 132

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]} Length = 140

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

 Score = 60.4 bits (145), Expect = 1e-12
 Identities = 24/123 (19%), Positives = 48/123 (39%), Gaps = 10/123 (8%)

Query: 11  LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDN 70
           L+SLNH++L    ++ S+ F+  +LG     R  +  +         +      S +   
Sbjct: 2   LQSLNHLTLAVSDLQKSVTFWHELLGLTLHARWNTGAYLTCGDLWVCL------SYDEAR 55

Query: 71  LPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSM 130
                +  +      +   E+   + +RL++  +   K    EG       +F DPDG  
Sbjct: 56  QYVPPQESDYTHYAFTVAEEDFEPLSQRLEQAGVTIWKQNKSEG----ASFYFLDPDGHK 111

Query: 131 IEI 133
           +E+
Sbjct: 112 LEL 114

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]} Length = 145

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

 Score = 59.2 bits (142), Expect = 4e-12
 Identities = 17/120 (14%), Positives = 32/120 (26%), Gaps = 8/120 (6%)

Query: 14  LNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNLPK 73
             H+ L    +  +L+ Y  +LG   + R                            L +
Sbjct: 8   PGHVQLRVLDMSKALEHYVELLGLIEMDRDDQGRVYLKAWTEVDKFSL--------VLRE 59

Query: 74  AGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEI 133
           A +             + +  +ER L        +    E      ++ F  P G   E+
Sbjct: 60  ADEPGMDFMGFKVVDEDALRQLERDLMAYGCAVEQLPAGELNSCGRRVRFQAPSGHHFEL 119

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]} Length = 145

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

 Score = 59.2 bits (142), Expect = 4e-12
 Identities = 20/137 (14%), Positives = 47/137 (34%), Gaps = 13/137 (9%)

Query: 11  LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMG----------- 59
              ++H++  C   + +  +YQ   G+  + R  + +     +                 
Sbjct: 5   FICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQV 64

Query: 60  IHLLKSEEPDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVD 119
           +  L  E       A  N     +H++++ +++  V   L+E  +  +    + G     
Sbjct: 65  MAPLNDESTVAKWLAKHNGRAGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGGNR 124

Query: 120 QLFFH--DPDGSMIEIC 134
             F H     G +IE+ 
Sbjct: 125 INFMHPKSGKGVLIELT 141

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]} Length = 149

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

 Score = 58.2 bits (139), Expect = 1e-11
 Identities = 21/141 (14%), Positives = 49/141 (34%), Gaps = 19/141 (13%)

Query: 11  LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRP-------------GSFDFDGAWLFNYG 57
           L  ++++S+V  S++ ++ F++  +G     R              GS   + A +    
Sbjct: 7   LLRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPD 65

Query: 58  MGIHLLKSEEPDNLPKAGKNINPKDN----HISFQCENMAIVERRLKEMKIDYVKSRVEE 113
               +  S        A     P +      + F  E++  +  RL +   + V   V+ 
Sbjct: 66  GHSRIELSRFLTPPTIADHRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQY 125

Query: 114 GGINVDQLFFHDPDGSMIEIC 134
              +    +    +G +I + 
Sbjct: 126 EN-SYRLCYIRGVEGILIGLA 145

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]} Length = 139

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

 Score = 57.4 bits (137), Expect = 2e-11
 Identities = 23/125 (18%), Positives = 47/125 (37%), Gaps = 6/125 (4%)

Query: 12  KSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFN-YGMGIHLLKSEEPDN 70
           + + H  +    ++ S+ FY   LG   +R+    +     +F  YG  +     E   N
Sbjct: 2   RRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYN 61

Query: 71  LPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSM 130
                   +    HI+   E++  +   +++  +      ++    +    F  DPDG  
Sbjct: 62  YGVTSYKHDEAYGHIAIGVEDVKELVADMRKHDV-----PIDYEDESGFMAFVVDPDGYY 116

Query: 131 IEICN 135
           IE+ N
Sbjct: 117 IELLN 121

>d1zswa2 d.32.1.10 (A:145-314) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]} Length = 170

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

 Score = 57.4 bits (138), Expect = 2e-11
 Identities = 16/124 (12%), Positives = 41/124 (33%), Gaps = 5/124 (4%)

Query: 11  LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDN 70
           ++ +  + L  R ++        + G+  + R        +        I +   +    
Sbjct: 10  IQGMGSVELTVRRLDKMASTLTEIFGYTEVSRNDQEAIFQSIKGEAFGEIVVKYLD---- 65

Query: 71  LPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSM 130
                K      +H++ + +N A +    +++K     S           L+F + +G +
Sbjct: 66  -GPTEKPGRGSIHHLAIRVKNDAELAYWEEQVKQRGFHSSGIIDRFYFKSLYFRESNGIL 124

Query: 131 IEIC 134
            EI 
Sbjct: 125 FEIA 128

>d2i7ra1 d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Streptococcus pneumoniae [TaxId: 1313]} Length = 115

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypotheical protein SP0731
species: Streptococcus pneumoniae [TaxId: 1313]

 Score = 54.4 bits (130), Expect = 1e-10
 Identities = 16/121 (13%), Positives = 37/121 (30%), Gaps = 11/121 (9%)

Query: 13  SLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNLP 72
           +LN + ++  +V       +++L          F    A        + L ++       
Sbjct: 2   NLNQLDIIVSNVPQVCADLEHILDKKADYANDGF----AQFTIGSHCLMLSQNHLVPLEN 57

Query: 73  KAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIE 132
                       I  + E++    +RL E+ I  +           + L    P G +++
Sbjct: 58  FQS------GIIIHIEVEDVDQNYKRLNELGIKVLHGPTVTDW-GTESLLVQGPAGLVLD 110

Query: 133 I 133
            
Sbjct: 111 F 111

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]} Length = 131

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

 Score = 53.0 bits (126), Expect = 5e-10
 Identities = 18/127 (14%), Positives = 33/127 (25%), Gaps = 19/127 (14%)

Query: 12  KSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNL 71
           +SL ++      V A   F    LG            +G           +   +     
Sbjct: 3   RSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTD----NGDLFRIDSRAWRIAVQQGE--- 55

Query: 72  PKAGKNINPKDNHISFQCENMAIVER---RLKEMKIDYVKSRVEEGGI--NVDQLFFHDP 126
                          ++  + A + +   +LK+  I                  + F DP
Sbjct: 56  -------VDDLAFAGYEVADAAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITFADP 108

Query: 127 DGSMIEI 133
            G  +EI
Sbjct: 109 FGLPLEI 115

>d1f1ua1 d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]} Length = 146

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

 Score = 51.6 bits (122), Expect = 2e-09
 Identities = 18/135 (13%), Positives = 37/135 (27%), Gaps = 10/135 (7%)

Query: 11  LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDN 70
           +    ++ +V   +  S +FY +VLG        +  +  +        + L +      
Sbjct: 14  IVRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDENTIYLRSLEEFIHHNLVLRQGPIAAV 73

Query: 71  LPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSM 130
                        +       +   E   KE+     + +        D +   DP G  
Sbjct: 74  ---------AAFAYRVKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRVEDPLGFP 124

Query: 131 IEICNCDVLPVVPLA 145
            E    +   V  L 
Sbjct: 125 YEFF-YETEHVERLT 138

>d1kw3b1 d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]} Length = 132

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

 Score = 50.4 bits (119), Expect = 5e-09
 Identities = 17/128 (13%), Positives = 38/128 (29%), Gaps = 19/128 (14%)

Query: 11  LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDN 70
           ++ L ++    + V A   F    +G       G      A    + + +          
Sbjct: 2   IERLGYLGFAVKDVPAWDHFLTKSVGLMAAGSAGDAALYRADQRAWRIAVQ--------- 52

Query: 71  LPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQ-----LFFHD 125
                        +   + ++ A +ER   +++   V     +  +   +     L   D
Sbjct: 53  -----PGELDDLAYAGLEVDDAAALERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQD 107

Query: 126 PDGSMIEI 133
           P G  +EI
Sbjct: 108 PFGLPLEI 115

>d1klla_ d.32.1.2 (A:) Mitomycin resistance protein D, MRD {Streptomyces lavendulae [TaxId: 1914]} Length = 128

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Mitomycin resistance protein D, MRD
species: Streptomyces lavendulae [TaxId: 1914]

 Score = 50.1 bits (118), Expect = 6e-09
 Identities = 18/123 (14%), Positives = 43/123 (34%), Gaps = 3/123 (2%)

Query: 14  LNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNLPK 73
           ++  ++V   +  S++FY+  +G        S     A L                  P+
Sbjct: 3   ISLFAVVVEDMAKSMEFYR-KMGVEIPAEADSAPHTEAVLDGGIRLAWDTVETVRSYDPE 61

Query: 74  AGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVE--EGGINVDQLFFHDPDGSMI 131
                      I+F+  + A V+++  E+     +  ++              DPDG+++
Sbjct: 62  WQAPTGGHRFAIAFEFPDTASVDKKYAELVDAGYEGHLKPWNAVWGQRYAIVKDPDGNVV 121

Query: 132 EIC 134
           ++ 
Sbjct: 122 DLF 124

>d2pjsa1 d.32.1.2 (A:3-113) Uncharacterized protein Atu1953 {Agrobacterium tumefaciens [TaxId: 358]} Length = 111

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Uncharacterized protein Atu1953
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 49.2 bits (116), Expect = 8e-09
 Identities = 18/118 (15%), Positives = 33/118 (27%), Gaps = 12/118 (10%)

Query: 16  HISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNLPKAG 75
             ++       +  FY ++LG                  +       +            
Sbjct: 5   VANIATPEPARAQAFYGDILGM----PVAMDHGWIVTHASPLEAHAQVSFAREGGSG--- 57

Query: 76  KNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEI 133
                    +S + +N   V  R+ +  +      V E    V +LF  DP G +I I
Sbjct: 58  ----TDVPDLSIEVDNFDEVHARILKAGLPIEYGPVTEAW-GVQRLFLRDPFGKLINI 110

>d1xrka_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptoalloteichus hindustanus [TaxId: 2017]} Length = 120

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptoalloteichus hindustanus [TaxId: 2017]

 Score = 48.8 bits (115), Expect = 1e-08
 Identities = 17/115 (14%), Positives = 36/115 (31%), Gaps = 7/115 (6%)

Query: 19  LVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNLPKAGKNI 78
           L  R V  +++F+ + LGF  +     F  D             + + +   +P   +  
Sbjct: 10  LTARDVAEAVEFWTDRLGFSRV-----FVEDDFAGVVRDDVTLFISAVQDQVVPDNTQAW 64

Query: 79  NPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEI 133
                      E   +V    ++     +   VE+      +    DP G+ +  
Sbjct: 65  VWVRGLDELYAEWSEVVSTNFRDASGPAMTEIVEQPWGR--EFALRDPAGNCVHF 117

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]} Length = 163

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

 Score = 48.3 bits (114), Expect = 4e-08
 Identities = 13/140 (9%), Positives = 35/140 (25%), Gaps = 11/140 (7%)

Query: 7   NPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAW---LFNYGMGIHLL 63
           +P  +K ++ +     + + +  +Y    G   +   G  +        +   G    +L
Sbjct: 1   DPFPVKGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSARFVL 60

Query: 64  KSEEPDNLPKAGKNINPKDN------HISFQCENMAIVERRLKEMKIDYVKSRVEEGGIN 117
            S      P      +           ++ +  +         E     V    E    +
Sbjct: 61  TSVIKPATPWGHFLADHVAEHGDGVVDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEH 120

Query: 118 --VDQLFFHDPDGSMIEICN 135
             V          +   + +
Sbjct: 121 GTVVLAAIATYGKTRHTLVD 140

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]} Length = 113

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

 Score = 47.1 bits (110), Expect = 6e-08
 Identities = 12/120 (10%), Positives = 30/120 (25%), Gaps = 12/120 (10%)

Query: 14  LNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNLPK 73
           + H++L    V A+ +F +   G                         +  ++       
Sbjct: 4   IKHLNLTVADVVAAREFLEKYFGLTCSGT------------RGNAFAVMRDNDGFILTLM 51

Query: 74  AGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEI 133
            GK +           +       ++ +   +           +    +   P G  IE+
Sbjct: 52  KGKEVQYPKTFHVGFPQESEEQVDKINQRLKEDGFLVEPPKHAHAYTFYVEAPGGFTIEV 111

>d1kw3b2 d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]} Length = 156

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

 Score = 47.5 bits (112), Expect = 9e-08
 Identities = 14/132 (10%), Positives = 29/132 (21%), Gaps = 6/132 (4%)

Query: 14  LNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNLPK 73
           + H          ++ FY  VLGF               +  + +      +     +  
Sbjct: 11  IGHFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHC----NGRHHTIAL 66

Query: 74  AGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSR--VEEGGINVDQLFFHDPDGSMI 131
           A   I  + +H   Q   +  V      +      +              +   P   + 
Sbjct: 67  AAFPIPKRIHHFMLQANTIDDVGYAFDRLDAAGRITSLLGRHTNDQTLSFYADTPSPMIE 126

Query: 132 EICNCDVLPVVP 143
                    V  
Sbjct: 127 VEFGWGPRTVDS 138

>d1jifa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptomyces verticillus [TaxId: 29309]} Length = 122

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptomyces verticillus [TaxId: 29309]

 Score = 45.1 bits (105), Expect = 3e-07
 Identities = 17/119 (14%), Positives = 35/119 (29%), Gaps = 7/119 (5%)

Query: 19  LVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNLPKAGKNI 78
           L    V A++ F+ + LGF        F      +    + +H+ ++E           I
Sbjct: 11  LTAVDVPANVSFWVDTLGFEKDFGDRDFA----GVRRGDIRLHISRTEHQIVADNTSAWI 66

Query: 79  NPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD 137
              D     +    A+      +     +    E       +    DP G+ +     +
Sbjct: 67  EVTDPDALHEEWARAVST-DYADTSGPAMTPVGESPAGR--EFAVRDPAGNCVHFTAGE 122

>d1cjxa1 d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]} Length = 150

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

 Score = 41.5 bits (97), Expect = 9e-06
 Identities = 23/144 (15%), Positives = 44/144 (30%), Gaps = 12/144 (8%)

Query: 6   ENPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKS 65
           ENP+ L     I     +       ++  +GF  +    S +     L+  G    +L +
Sbjct: 2   ENPMGLMGFEFIEFASPTPGTLEPIFEI-MGFTKVATHRSKNV---HLYRQGEINLILNN 57

Query: 66  EEPDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEG--------GIN 117
           E             P    ++F+ ++      R  E+    +               GI 
Sbjct: 58  EPNSIASYFAAEHGPSVCGMAFRVKDSQKAYNRALELGAQPIHIDTGPMELNLPAIKGIG 117

Query: 118 VDQLFFHDPDGSMIEICNCDVLPV 141
              L+  D  G    I + D + +
Sbjct: 118 GAPLYLIDRFGEGSSIYDIDFVYL 141

>d1sp8a2 d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]} Length = 224

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

 Score = 41.3 bits (96), Expect = 2e-05
 Identities = 9/105 (8%), Positives = 27/105 (25%), Gaps = 14/105 (13%)

Query: 11  LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDG---------AWLFNYGMGIH 61
           L   +HI      +  +  ++    GF       + D                +  + + 
Sbjct: 7   LSRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSENVLLP 66

Query: 62  LLKSEEPDNLPKAGKNINPKDN-----HISFQCENMAIVERRLKE 101
           L +           +            H++   +++    R ++ 
Sbjct: 67  LNEPVHGTKRRSQIQTFLDHHGGPGVQHMALASDDVLRTLREMQA 111

>d1ecsa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Klebsiella pneumoniae [TaxId: 573]} Length = 120

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Klebsiella pneumoniae [TaxId: 573]

 Score = 40.0 bits (92), Expect = 2e-05
 Identities = 16/116 (13%), Positives = 32/116 (27%), Gaps = 7/116 (6%)

Query: 19  LVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNLPKAGKNI 78
           L  R  +++  FY+  LGF  + R   +              H                +
Sbjct: 8   LPSRDFDSTAAFYER-LGFGIVFRDAGWMILQRGDLMLEFFAH---PGLDPLASWFSCCL 63

Query: 79  NPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEIC 134
              D    ++      ++         +       GG         DPDG+++ + 
Sbjct: 64  RLDDLAEFYRQCKSVGIQETSSGYPRIHAPELQGWGG---TMAALVDPDGTLLRLI 116

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 167

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 37.5 bits (86), Expect = 3e-04
 Identities = 11/138 (7%), Positives = 28/138 (20%), Gaps = 24/138 (17%)

Query: 2   KESVENPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRR----PGSFDFDGAWLFN-- 55
           K    +   +K  +HI   C         +   LG     +     G+       L +  
Sbjct: 1   KNPKSDKFKVKRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGD 60

Query: 56  --------YGMGIHLLKSEEPDNLPKAGKNINPKDN----------HISFQCENMAIVER 97
                   Y   +   + +          +     +           ++ + E+      
Sbjct: 61  LRFLFTAPYSPSLSAGEIKPTTTASIPSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFS 120

Query: 98  RLKEMKIDYVKSRVEEGG 115
                        +    
Sbjct: 121 ISVANGAIPSSPPIVLNE 138

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]} Length = 149

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.7 bits (84), Expect = 4e-04
 Identities = 19/133 (14%), Positives = 42/133 (31%), Gaps = 8/133 (6%)

Query: 11  LKSLNHISLVCRSVEASLDFYQNVLGFFPI----RRPGSFDFDGAWLFNYGMGIHLLKSE 66
               + ++    + + +  FY N +GF P+       GS +     +    +   L  + 
Sbjct: 9   FLHFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQGKIVFVLCSAL 68

Query: 67  EPDNLPKAGKNINPKD--NHISFQCENMAIVERRLKEMKIDYVKSRVEEGGIN--VDQLF 122
            P N       +   D    I+F+ E+   + ++ +E     V+    E      V    
Sbjct: 69  NPWNKEMGDHLVKHGDGVKDIAFEVEDCEHIVQKARERGAKIVREPWVEEDKFGKVKFAV 128

Query: 123 FHDPDGSMIEICN 135
                 +   +  
Sbjct: 129 LQTYGDTTHTLVE 141

>d1cjxa2 d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]} Length = 203

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

 Score = 37.2 bits (86), Expect = 4e-04
 Identities = 13/108 (12%), Positives = 35/108 (32%), Gaps = 11/108 (10%)

Query: 11  LKSLNHISLVCR--SVEASLDFYQNVLGFFPIRRPGSFDFDGAWLF------NYGMGIHL 62
           LK ++H++       +    +FY+ +  F   R                   +  + I L
Sbjct: 3   LKVIDHLTHNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAPDGMIRIPL 62

Query: 63  LKSEEPDNLPKA---GKNINPKDNHISFQCENMAIVERRLKEMKIDYV 107
            +              +       H++F  +++      LK++ + ++
Sbjct: 63  NEESSKGAGQIEEFLMQFNGEGIQHVAFLTDDLVKTWDALKKIGMRFM 110

>d1sqda2 d.32.1.3 (A:181-410) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 230

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 37.4 bits (86), Expect = 5e-04
 Identities = 15/114 (13%), Positives = 33/114 (28%), Gaps = 14/114 (12%)

Query: 2   KESVENPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAW-------LF 54
             S      ++ L+H       +  +L +     GF       + D   A        L 
Sbjct: 11  ASSFPLDYGIRRLDHAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLA 70

Query: 55  NYGMGIHLLKSEEPDNLPKAG-------KNINPKDNHISFQCENMAIVERRLKE 101
           +    + L  +E      +          N      H++   E++    R +++
Sbjct: 71  SNDEMVLLPINEPVHGTKRKSQIQTYLEHNEGAGLQHLALMSEDIFRTLREMRK 124

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]} Length = 172

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

 Score = 36.8 bits (84), Expect = 6e-04
 Identities = 9/113 (7%), Positives = 24/113 (21%), Gaps = 18/113 (15%)

Query: 7   NPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAW-------------- 52
           +     + +H+ L C    ++   +   LG     R      + A               
Sbjct: 7   DRFHTLAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGSLSFLF 66

Query: 53  -LFNYGMGIHLLKSEEPDNLPKAGKNINPKDN---HISFQCENMAIVERRLKE 101
                        +    +   A +           ++ +  +     R    
Sbjct: 67  TAPYAHGADAATAALPSFSAAAARRFAADHGLAVRAVALRVADAEDAFRASVA 119

>d1t47a2 d.32.1.3 (A:179-377) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]} Length = 199

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

 Score = 36.5 bits (84), Expect = 7e-04
 Identities = 27/154 (17%), Positives = 53/154 (34%), Gaps = 31/154 (20%)

Query: 11  LKSLNHISLVCR--SVEASLDFYQNVLGFFPIRRPGSFDFDG--AWLFNYGMGIHLLKSE 66
            ++++H         +   + FY  V+GF  ++     D     + L +  +    LK +
Sbjct: 4   FQAIDHCVGNVELGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADGTLKVK 63

Query: 67  EPDNLPKAGKNINPKD-----------NHISFQCENMAIVERRLKEMKI----------D 105
            P N P   K  +  D            HI+    ++    R ++   +          D
Sbjct: 64  FPINEPALAKKKSQIDEYLEFYGGAGVQHIALNTGDIVETVRTMRAAGVQFLDTPDSYYD 123

Query: 106 YVKSRVEEGGINVDQLFFH------DPDGSMIEI 133
            +   V +  + VD L         D DG +++I
Sbjct: 124 TLGEWVGDTRVPVDTLRELKILADRDEDGYLLQI 157

>d1sqia2 d.32.1.3 (A:157-366) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]} Length = 210

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.6 bits (79), Expect = 0.004
 Identities = 20/135 (14%), Positives = 46/135 (34%), Gaps = 25/135 (18%)

Query: 11  LKSLNHISLVCR--SVEASLDFYQNVLGFFPIRRPGSFDFDGAW--LFNYGMGIHLLKSE 66
           L+ ++HI        +E++ ++Y   L F              +  L +  +  +    +
Sbjct: 22  LEIIDHIVGNQPDQEMESASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESIK 81

Query: 67  EPDNLPKAGKNINPKD-----------NHISFQCENMAIVERRLKEMKI----------D 105
            P N P  G+  +               HI+ + E++    R L+E  +           
Sbjct: 82  MPINEPAPGRKKSQIQEYVDYNGGAGVQHIALRTEDIITTIRHLRERGMEFLAVPSSYYR 141

Query: 106 YVKSRVEEGGINVDQ 120
            ++  ++   I V +
Sbjct: 142 LLRENLKTSKIQVKE 156

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	194
d1zswa1	144	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.89
d1zswa2	170	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.86
d1ss4a_	149	Hypothetical protein BC1747 {Bacillus cereus (stra	99.86
d2i7ra1	115	Hypotheical protein SP0731 {Streptococcus pneumoni	99.85
d1npba_	140	Fosfomycin resistance protein A (FosA) {Serratia m	99.84
d1r9ca_	130	Fosfomycin resistance protein FosX {Mesorhizobium	99.84
d1xqaa_	113	Hypothetical protein BC3580 {Bacillus cereus [TaxI	99.83
d1f9za_	135	Glyoxalase I (lactoylglutathione lyase) {Escherich	99.83
d1jc4a_	145	Methylmalonyl-CoA epimerase {Propionibacterium she	99.82
d1nkia_	134	Fosfomycin resistance protein A (FosA) {Pseudomona	99.82
d1lgta1	131	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.82
d1mpya2	162	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	99.82
d1kw3b1	132	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.81
d1f1ua1	146	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	99.81
d1qipa_	176	Glyoxalase I (lactoylglutathione lyase) {Human (Ho	99.79
d2pjsa1	111	Uncharacterized protein Atu1953 {Agrobacterium tum	99.79
d1twua_	137	Hypothetical protein YycE {Bacillus subtilis [TaxI	99.79
d1mpya1	145	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	99.78
d1klla_	128	Mitomycin resistance protein D, MRD {Streptomyces	99.75
d2c21a1	139	Glyoxalase I (lactoylglutathione lyase) {Leishmani	99.74
d1jifa_	122	Bleomycin resistance protein, BRP {Streptomyces ve	99.73
d1f1ua2	176	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	99.73
d1t47a1	163	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	99.72
d1kw3b2	156	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.72
d1ecsa_	120	Bleomycin resistance protein, BRP {Klebsiella pneu	99.71
d1sqia1	149	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	99.69
d1sqda1	167	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	99.68
d1xrka_	120	Bleomycin resistance protein, BRP {Streptoalloteic	99.64
d1sp8a1	172	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	99.64
d1cjxa1	150	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	99.52
d1xy7a_	135	Hypothetical protein At5g48480 {Thale cress (Arabi	99.49
d1sp8a2	224	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	99.1
d1sqia2	210	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	99.07
d1t47a2	199	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	99.07
d1cjxa2	203	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	99.06
d1u6la_	137	Hypothetical protein PA1353 {Pseudomonas aeruginos	98.96
d1sqda2	230	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	98.91
d1u7ia_	134	Hypothetical protein PA1358 {Pseudomonas aeruginos	98.43
d1tsja_	129	Hypothetical protein MW1090 {Staphylococcus aureus	98.11
d1xqaa_	113	Hypothetical protein BC3580 {Bacillus cereus [TaxI	95.31
d1u69a_	156	Hypothetical protein PA2721 {Pseudomonas aeruginos	95.25
d1ss4a_	149	Hypothetical protein BC1747 {Bacillus cereus (stra	94.35
d1zswa1	144	Hypothetical protein BC1024 {Bacillus cereus [TaxI	93.52
d1sqia1	149	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	90.83
d1t47a1	163	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	89.65
d1r9ca_	130	Fosfomycin resistance protein FosX {Mesorhizobium	89.2
d1npba_	140	Fosfomycin resistance protein A (FosA) {Serratia m	88.95
d1sqda1	167	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	88.76
d1lgta1	131	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	88.11
d1jc4a_	145	Methylmalonyl-CoA epimerase {Propionibacterium she	87.28
d1f1ua2	176	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	86.56
d1zswa2	170	Hypothetical protein BC1024 {Bacillus cereus [TaxI	85.7
d1f9za_	135	Glyoxalase I (lactoylglutathione lyase) {Escherich	84.73
d1k4na_	190	Hypothetical protein YecM (EC4020) {Escherichia co	83.16
d1sp8a1	172	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	80.97
d1cjxa1	150	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	80.74

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.89  E-value=1e-22  Score=148.44  Aligned_cols=133  Identities=18%  Similarity=0.183  Sum_probs=93.6

Q ss_pred             CcccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEE--EeCC---cEEEEeecCCCCCCCCCCCCCCCCc
Q 029385            8 PLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWL--FNYG---MGIHLLKSEEPDNLPKAGKNINPKD   82 (194)
Q Consensus         8 ~~~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~--~~~g---~~~~l~~~~~~~~~~~~~~~~~~g~   82 (194)
                      |..|++|+||+|.|+|++++.+||+++|||++..+....+....+.  +..+   ....+.....+...+..  ....+.
T Consensus         1 m~~i~gl~Hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~   78 (144)
T d1zswa1           1 MYEIKGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFEIPLVGRTY--RGTNAI   78 (144)
T ss_dssp             SSCCCSEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEETTEEEEEEEEEESTTCCTTSEEEEEECTTCCBCB--CCBSEE
T ss_pred             CCcccceeeEEEEeCCHHHHHHHHHHHhCCeeEeeeccccCCceeEEEecccccceeeEEeecccccccCCc--cCCCce
Confidence            4579999999999999999999999999999988764333333322  2221   11222222222221111  333468


Q ss_pred             cEEEEeeCC---HHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEecCCCCcCcCC
Q 029385           83 NHISFQCEN---MAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVVPLA  145 (194)
Q Consensus        83 ~hiaf~v~d---l~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~~~p~~p~~  145 (194)
                      .|+||.|+|   ++++.++|++.|+.+.... ...  +.+++||+|||||.|||+++...+..||.
T Consensus        79 ~Hiaf~v~~~~~l~~~~~~l~~~gv~~~~~~-~~~--~~~~~yf~DPdG~~iEl~~~~~~~~~~w~  141 (144)
T d1zswa1          79 TRIGLLVPSEDSLHYWKERFEKFDVKHSEMT-TYA--NRPALQFEDAEGLRLVLLVSNGEKVEHWE  141 (144)
T ss_dssp             EEEEEEESCHHHHHHHHHHHHHTTCEECCSE-EET--TEEEEEEECTTCCEEEEEECTTCCCTTCC
T ss_pred             eEEEEecCCchhHHHHhhhhhccceeeeCcc-ccC--CeEEEEEECCCCCEEEEEEeCCCCCCCCC
Confidence            999999997   7888999999999875433 333  34899999999999999998776666664

>d1zswa2 d.32.1.10 (A:145-314) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.86  E-value=1.6e-21  Score=146.83  Aligned_cols=124  Identities=15%  Similarity=0.262  Sum_probs=89.3

Q ss_pred             CCCCCCcccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeCCc---EEEEeecCCCCCCCCCCCCCC
Q 029385            3 ESVENPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGM---GIHLLKSEEPDNLPKAGKNIN   79 (194)
Q Consensus         3 ~~~~~~~~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~g~---~~~l~~~~~~~~~~~~~~~~~   79 (194)
                      +..|...+|++|+||+|.|+|++++.+||+++|||++..+.+.   ...+....+.   .+.+.....+...     ...
T Consensus         2 ~~vp~~~~I~Gl~HV~L~V~Dle~s~~FY~~vLG~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~   73 (170)
T d1zswa2           2 SEVPAKHQIQGMGSVELTVRRLDKMASTLTEIFGYTEVSRNDQ---EAIFQSIKGEAFGEIVVKYLDGPTEK-----PGR   73 (170)
T ss_dssp             CSSCGGGSCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEECSS---EEEEESSTTCSTTCEEEEECCSSBCB-----CCB
T ss_pred             CCCChhHHhCCeeeEEEEeCCHHHHHHHHHHHhCCEEEeecCc---eEEEEeccCccceEEEeccccccccc-----cCc
Confidence            3456667899999999999999999999999999999998741   1223222221   1222222221111     233


Q ss_pred             CCccEEEEeeCC---HHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEecC
Q 029385           80 PKDNHISFQCEN---MAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD  137 (194)
Q Consensus        80 ~g~~hiaf~v~d---l~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~  137 (194)
                      .+++||||.|+|   ++++.+++.+.|+++.. ...+.  +.+++||+|||||+|||++..
T Consensus        74 ~~l~HiAf~V~~~~~l~~~~~~l~~~G~~~~~-~~~~~--~~~s~Yf~DPdG~~iEl~t~~  131 (170)
T d1zswa2          74 GSIHHLAIRVKNDAELAYWEEQVKQRGFHSSG-IIDRF--YFKSLYFRESNGILFEIATDG  131 (170)
T ss_dssp             TCEEEEEEEESSHHHHHHHHHHHHHTTCCCCC-CEECS--SEEEEEEECTTCCEEEEEEEE
T ss_pred             cccceEEEEeCChHHHHHHHHHHHhcCCCccc-cccCC--CEEEEEEECCCCcEEEEEECC
Confidence            478899999985   88889999999999754 32333  248999999999999999865

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

Probab=99.86  E-value=6e-21  Score=139.04  Aligned_cols=125  Identities=15%  Similarity=0.215  Sum_probs=91.2

Q ss_pred             ccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCC----------Cc---ceEEEEeC--CcEEEEeecCCCCCCCCC
Q 029385           10 CLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSF----------DF---DGAWLFNY--GMGIHLLKSEEPDNLPKA   74 (194)
Q Consensus        10 ~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~----------~~---~~~~~~~~--g~~~~l~~~~~~~~~~~~   74 (194)
                      ++++|+||+|.|+|++++.+||++ |||++..+....          +.   ...++...  ...+++++..........
T Consensus         6 ~~~ri~Hv~i~v~Dle~s~~FY~~-LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~   84 (149)
T d1ss4a_           6 KLLRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHSRIELSRFLTPPTIADH   84 (149)
T ss_dssp             CEEEEEEEEEECSCHHHHHHHHHH-HTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTSSCEEEEEEEEESCCCCBC
T ss_pred             CCCEEeEEEEEeCCHHHHHHHHHH-cCCcEeeeeccceeeeeeeeccCCCceeEEEEeecccceEEEEEeeccccCcccc
Confidence            688999999999999999999998 999988764210          01   11222222  245666654433332211


Q ss_pred             --CCCCCCCccEEEEeeCCHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEec
Q 029385           75 --GKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC  136 (194)
Q Consensus        75 --~~~~~~g~~hiaf~v~dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~  136 (194)
                        ......|..|++|.|+|+++++++|++.|+++..++....+ +.+.+|++||||++|||++.
T Consensus        85 ~~~~~~~~g~~hi~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~-~~~~~~~~DPdG~~iEl~e~  147 (149)
T d1ss4a_          85 RTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYEN-SYRLCYIRGVEGILIGLAEE  147 (149)
T ss_dssp             TTCCSSSBEEEEEEEEESCHHHHHHHHHHTTCEESSCCEEETT-TEEEEEEECGGGCEEEEEEE
T ss_pred             cccCCCCcceeEEEEeechhHHHHHHHHHCCCeEccCCeECCC-CeEEEEEECCCCCEEEEEEc
Confidence              11345678999999999999999999999999877755443 44889999999999999974

>d2i7ra1 d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypotheical protein SP0731
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.85  E-value=9.6e-21  Score=133.45  Aligned_cols=114  Identities=13%  Similarity=0.118  Sum_probs=88.4

Q ss_pred             ceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeCCcEEEEeecCCCCCCCCCCCCCCCCccEEEEeeCC
Q 029385           12 KSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQCEN   91 (194)
Q Consensus        12 ~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~~hiaf~v~d   91 (194)
                      ++|+|+.|.|+|+++|.+||+++||+++....+    ..+++...+..+.+.......   .   .......+++|.|+|
T Consensus         1 m~l~~i~i~V~di~~a~~FYe~~lg~~~~~~~~----~~~~~~~g~~~l~l~~~~~~~---~---~~~~~~~~~~f~v~D   70 (115)
T d2i7ra1           1 MNLNQLDIIVSNVPQVCADLEHILDKKADYAND----GFAQFTIGSHCLMLSQNHLVP---L---ENFQSGIIIHIEVED   70 (115)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHHHTSCCSEEET----TEEEEEETTEEEEEESSCSSS---C---CCCCSCEEEEEECSC
T ss_pred             CcceEEEEEECCHHHHHHHHHHhhCCceeeecC----CeEEEEEcCceeeeeecccCC---C---CCCCcceEEEEEECC
Confidence            478999999999999999999999999887654    334444455556665543211   1   223445689999999


Q ss_pred             HHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEec
Q 029385           92 MAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC  136 (194)
Q Consensus        92 l~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~  136 (194)
                      +++++++++++|+++..++...+ ++.+.+||+|||||.||+++.
T Consensus        71 ~d~~~~~l~~~G~~i~~~~~~~~-~g~~~~~~~DPdGn~ie~~~~  114 (115)
T d2i7ra1          71 VDQNYKRLNELGIKVLHGPTVTD-WGTESLLVQGPAGLVLDFYRM  114 (115)
T ss_dssp             HHHHHHHHHHHTCCEEEEEEECT-TSCEEEEEECGGGCEEEEEEC
T ss_pred             HHHHHHHHHhhccccccceEEee-CCeEEEEEECCCCCEEEEEEe
Confidence            99999999999999988775544 455899999999999999974

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

Probab=99.84  E-value=4.7e-20  Score=133.59  Aligned_cols=115  Identities=24%  Similarity=0.403  Sum_probs=88.3

Q ss_pred             ccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeCCcEEEEeecCCCCCCCCCCCCCCCCccEEEEee
Q 029385           10 CLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQC   89 (194)
Q Consensus        10 ~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~~hiaf~v   89 (194)
                      ++++|+||+|.|+|++++++||+++|||++..+.+    ...++...+....+.........+    ....+..|++|.+
T Consensus         1 Mi~~l~Hi~l~v~d~~~~~~FY~~vLG~~~~~~~~----~~~~~~~~~~~~~l~~~~~~~~~~----~~~~~~~h~~~~~   72 (140)
T d1npba_           1 MLQSLNHLTLAVSDLQKSVTFWHELLGLTLHARWN----TGAYLTCGDLWVCLSYDEARQYVP----PQESDYTHYAFTV   72 (140)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHTTSCCEEEEEET----TEEEEEETTEEEEEEECTTCCCCC----GGGSCSCEEEEEC
T ss_pred             CCCcEeEEEEEeCCHHHHHHHHHHHhCCEEEEEec----cccccccccccceeecccccccCC----CcCCccceeeeec
Confidence            47899999999999999999999999999988864    344444455555555443322221    3456778888888


Q ss_pred             C--CHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEec
Q 029385           90 E--NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC  136 (194)
Q Consensus        90 ~--dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~  136 (194)
                      +  |+++++++|++.|+++...+.    ...+.+||+|||||.|||++.
T Consensus        73 ~~~d~~~~~~~l~~~Gv~~~~~~~----~~~~~~~~~DPdGn~iEi~~~  117 (140)
T d1npba_          73 AEEDFEPLSQRLEQAGVTIWKQNK----SEGASFYFLDPDGHKLELHVG  117 (140)
T ss_dssp             CHHHHHHHHHHHHHTTCCEEECCC----SSSEEEEEECTTCCEEEEEEC
T ss_pred             hHHHHHHHHHHHHHCCCeEeecCC----CCceEEEEECCCCCEEEEEEC
Confidence            5  899999999999999876442    223889999999999999864

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

Probab=99.84  E-value=3.1e-20  Score=132.69  Aligned_cols=117  Identities=15%  Similarity=0.283  Sum_probs=86.2

Q ss_pred             ccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCC---cceEEEEeCCcEEEEeecCCCCCCCCCCCCCCCCccEEE
Q 029385           10 CLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFD---FDGAWLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHIS   86 (194)
Q Consensus        10 ~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~---~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~~hia   86 (194)
                      ++++|+||+|.|+|++++++||+++|||++..+.+...   ....++...+..+.+.....         ....+..|++
T Consensus         1 Mi~~i~Hi~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~   71 (130)
T d1r9ca_           1 MIEGLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGDIWVAIMQGEK---------LAERSYNHIA   71 (130)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHHHCCEEEEEGGGSTTCCSCEEEEEETTEEEEEEECCC---------CSSCCSCEEE
T ss_pred             CCCcEeEEEEEeCCHHHHHHHHHHhcCCEEEEEcCCccccceeEEEEecCCEEEeeccccc---------ccccceeeee
Confidence            36789999999999999999999999999988765322   22344444454555544321         2234678999


Q ss_pred             EeeC--CHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEec
Q 029385           87 FQCE--NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC  136 (194)
Q Consensus        87 f~v~--dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~  136 (194)
                      |.++  |+++++++++++|+++..++.... .+.+.+||+|||||+|||++.
T Consensus        72 f~v~~~dv~~~~~~l~~~gv~i~~~~~~~~-~~~~~~~~~DPdGn~iEl~~~  122 (130)
T d1r9ca_          72 FKIDDADFDRYAERVGKLGLDMRPPRPRVE-GEGRSIYFYDDDNHMFELHTG  122 (130)
T ss_dssp             EECCGGGHHHHHHHHHHHTCCBCCCCC------CCEEEEECTTSCEEEEECC
T ss_pred             ecccHHHHHHHHHHHHHCCCeEecCCcccC-CCEEEEEEECCCCCEEEEEEC
Confidence            9876  899999999999999876543332 233889999999999999864

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

Probab=99.83  E-value=2e-20  Score=130.37  Aligned_cols=106  Identities=22%  Similarity=0.344  Sum_probs=80.0

Q ss_pred             ceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeCC--cEEEEeecCCCCCCCCCCCCCCCCccEEEEee
Q 029385           12 KSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYG--MGIHLLKSEEPDNLPKAGKNINPKDNHISFQC   89 (194)
Q Consensus        12 ~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~g--~~~~l~~~~~~~~~~~~~~~~~~g~~hiaf~v   89 (194)
                      ++|+||.|.|+|++++.+||+++|||++..+.+    ...++...+  ..+.+.....         ...++..|++|.|
T Consensus         2 m~i~Hi~l~v~Dl~~a~~FY~~~lG~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~h~~f~v   68 (113)
T d1xqaa_           2 MGIKHLNLTVADVVAAREFLEKYFGLTCSGTRG----NAFAVMRDNDGFILTLMKGKE---------VQYPKTFHVGFPQ   68 (113)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHHHCCEEEEEET----TTEEEEECTTCCEEEEEECSS---------CCCCTTCCEEEEC
T ss_pred             CcccEEEEEeCCHHHHHHHHHHhhCCEEEEeec----Ccceeeeecceeeeeeeeeec---------ccccccceeeeee
Confidence            578999999999999999999999999988764    333433333  3444443321         2234678999999


Q ss_pred             CC---HHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEE
Q 029385           90 EN---MAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEIC  134 (194)
Q Consensus        90 ~d---l~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~  134 (194)
                      +|   ++++.+++++.|+++...+ . .+  .+.+||+|||||.|||+
T Consensus        69 ~~~~~v~~~~~~l~~~G~~~~~~~-~-~~--~~~~~~~DPdG~~iEi~  112 (113)
T d1xqaa_          69 ESEEQVDKINQRLKEDGFLVEPPK-H-AH--AYTFYVEAPGGFTIEVM  112 (113)
T ss_dssp             SSHHHHHHHHHHHHHTTCCCCCCE-E-C---CEEEEEEETTTEEEEEE
T ss_pred             ccccchhhhhhhHHHcCCccccCC-C-Cc--eEEEEEECCCCCEEEEE
Confidence            86   7788999999999976543 2 22  27899999999999996

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

Probab=99.83  E-value=1.7e-20  Score=133.45  Aligned_cols=122  Identities=23%  Similarity=0.301  Sum_probs=87.4

Q ss_pred             ceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEE-eCC-----cEEEEeecCCCCCCCCCCCCCCCCccEE
Q 029385           12 KSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLF-NYG-----MGIHLLKSEEPDNLPKAGKNINPKDNHI   85 (194)
Q Consensus        12 ~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~-~~g-----~~~~l~~~~~~~~~~~~~~~~~~g~~hi   85 (194)
                      ++|+|++|.|+|+++|.+||+++|||++..+.........+.. ...     ...........     .......+..|+
T Consensus         1 Mkl~Hv~i~V~Dl~~s~~FY~~iLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~   75 (135)
T d1f9za_           1 MRLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGV-----DKYELGTAYGHI   75 (135)
T ss_dssp             CCEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESSCTTTSCEEEEEEETTC-----CCCCCCSSEEEE
T ss_pred             CcceEEEEEcCCHHHHHHHHHHHhCCEEEeeccccccceeeeeeccceeeecccccccccccc-----ccccccccceee
Confidence            5788999999999999999999999999877543322222221 111     11111111111     111345678899


Q ss_pred             EEeeCCHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEecCC
Q 029385           86 SFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV  138 (194)
Q Consensus        86 af~v~dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~~  138 (194)
                      ++.+++++.+.+++++.|..+...+...+..+.+.+|++|||||+|||++...
T Consensus        76 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~q~~~  128 (135)
T d1f9za_          76 ALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKD  128 (135)
T ss_dssp             EEECSCHHHHHHHHHHTTCEEEEEEEECTTSCCEEEEEECTTSCEEEEEEC--
T ss_pred             ccchHHHHHHHHHHHHcCCCeecCCccccCCCeEEEEEECCCCCEEEEEECCC
Confidence            99999999999999999999888776555555688999999999999998653

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

Probab=99.82  E-value=1.9e-20  Score=135.41  Aligned_cols=128  Identities=13%  Similarity=0.263  Sum_probs=91.3

Q ss_pred             ccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEE--E------eCCcEEEEeecCCCCCCCCC---CCCC
Q 029385           10 CLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWL--F------NYGMGIHLLKSEEPDNLPKA---GKNI   78 (194)
Q Consensus        10 ~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~--~------~~g~~~~l~~~~~~~~~~~~---~~~~   78 (194)
                      ++.+|+||+|.|+|+++|.+||+++||+++..............  .      ..+..+++++...+......   ....
T Consensus         4 m~~~i~Hi~i~v~Dl~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~~~~~~~~   83 (145)
T d1jc4a_           4 LFICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLNDESTVAKWLAKHNG   83 (145)
T ss_dssp             CCSEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEESSTTSHHHHHHHHTTT
T ss_pred             cceEEeEEEEEeCCHHHHHHHHHhhccCceeeeeeecccceEEEeeeceeccccccchhhhhhhhcccCcccccccccCC
Confidence            48999999999999999999999999999877654222222211  1      23357788776544432211   0134


Q ss_pred             CCCccEEEEeeCCHHHHHHHHHhCCCeEEccceecCccceEEEEE--eCCCCCEEEEEecC
Q 029385           79 NPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFF--HDPDGSMIEICNCD  137 (194)
Q Consensus        79 ~~g~~hiaf~v~dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~--~DPDG~~iEi~~~~  137 (194)
                      ..|..|+||.|+|+++++++|+++|+++..++...+..+.+.+|+  +||||++|||++.+
T Consensus        84 ~~g~~Hia~~v~di~~~~~~l~~~Gv~~~~~~~~~~~~g~~~~f~~p~dp~G~~iEl~e~p  144 (145)
T d1jc4a_          84 RAGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGGNRINFMHPKSGKGVLIELTQYP  144 (145)
T ss_dssp             CCEEEEEEEECSCHHHHHHHHHHHTCCBSCSSCEECSSSCEEEEBCGGGGTTSCEEEEECC
T ss_pred             CCcceEEEEecchHHHHHHHHHHCCCEEeCCCceECCCCCEEEEEeccCCCCeEEEEEECC
Confidence            568999999999999999999999999876543322223244445  68999999999974

>d1nkia_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.82  E-value=1.9e-19  Score=129.35  Aligned_cols=112  Identities=26%  Similarity=0.384  Sum_probs=84.1

Q ss_pred             ccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeCCcEEEEeecCCCCCCCCCCCCCCCCccEEEEee
Q 029385           10 CLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQC   89 (194)
Q Consensus        10 ~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~~hiaf~v   89 (194)
                      ++++|+||+|.|+|++++.+||+++||+++..+.+    ...++...+..++........       ....+..|++|.+
T Consensus         1 mi~~i~Hv~l~v~d~~~~~~FY~~~lG~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~h~~~~~   69 (134)
T d1nkia_           1 MLTGLNHLTLAVADLPASIAFYRDLLGFRLEARWD----QGAYLELGSLWLCLSREPQYG-------GPAADYTHYAFGI   69 (134)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET----TEEEEEETTEEEEEEECTTCC-------CCCSSSCEEEEEE
T ss_pred             CCCcEeEEEEEeCCHHHHHHHHHHhhCCeEEEecc----ceeeeecCCeEEEEeeecccc-------ccccccccchhcc
Confidence            47899999999999999999999999999998875    445555555555554433221       2223455666655


Q ss_pred             --CCHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEec
Q 029385           90 --ENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC  136 (194)
Q Consensus        90 --~dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~  136 (194)
                        +|+++++++|+++|+++....  .+  +.+.+||+|||||.|||++.
T Consensus        70 ~~~dl~~~~~~l~~~G~~~~~~~--~~--~~~~~~f~DPdGn~iEl~~~  114 (134)
T d1nkia_          70 AAADFARFAAQLRAHGVREWKQN--RS--EGDSFYFLDPDGHRLEAHVG  114 (134)
T ss_dssp             CHHHHHHHHHHHHHTTCCEEECC--CS--SSCEEEEECTTCCEEEEESC
T ss_pred             ccchHHHHHHHHHHCCCcCccCC--Cc--ceeEEEEECCCCCEEEEEEC
Confidence              599999999999999986643  12  23789999999999999864

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

Probab=99.82  E-value=2.6e-20  Score=134.12  Aligned_cols=111  Identities=17%  Similarity=0.194  Sum_probs=84.9

Q ss_pred             cceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeCCcE--EEEeecCCCCCCCCCCCCCCCCccEEEEe
Q 029385           11 LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMG--IHLLKSEEPDNLPKAGKNINPKDNHISFQ   88 (194)
Q Consensus        11 i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~g~~--~~l~~~~~~~~~~~~~~~~~~g~~hiaf~   88 (194)
                      |++|+||+|.|+|++++.+||+++|||++..+.+    ...|+...+..  +.+..            ...++..|++|.
T Consensus         2 I~~l~hv~i~V~Dl~~s~~FY~~vLG~~~~~~~~----~~~~l~~~~~~~~l~l~~------------~~~~~~~h~~f~   65 (131)
T d1lgta1           2 IRSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTD----NGDLFRIDSRAWRIAVQQ------------GEVDDLAFAGYE   65 (131)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET----TEEEEESSSBSCSEEEEE------------CTTCEEEEEEEE
T ss_pred             cccccEEEEEeCCHHHHHHHHHHhhCCceeecCC----cceEEeecCCceEEEEec------------CCCCCceEEEEE
Confidence            7899999999999999999999999999998875    45554333322  32322            223478899999


Q ss_pred             eC---CHHHHHHHHHhCCCeEEccceec--CccceEEEEEeCCCCCEEEEEecC
Q 029385           89 CE---NMAIVERRLKEMKIDYVKSRVEE--GGINVDQLFFHDPDGSMIEICNCD  137 (194)
Q Consensus        89 v~---dl~~~~~~l~~~Gi~~~~~~~~~--~g~~~~~~~~~DPDG~~iEi~~~~  137 (194)
                      |.   +++++.++|++.|+++...+...  .....+.+||+|||||.|||+...
T Consensus        66 v~~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~f~DPdGn~iE~~~~~  119 (131)
T d1lgta1          66 VADAAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITFADPFGLPLEIYYGA  119 (131)
T ss_dssp             ESSHHHHHHHHHHHHHTTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEECC
T ss_pred             EccHHHHHHHHHHHHHcCCceEECCccccccCCceEEEEEECCCCCEEEEEeCC
Confidence            96   67889999999999988765322  112347899999999999998653

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=99.82  E-value=5.2e-20  Score=137.14  Aligned_cols=121  Identities=15%  Similarity=0.191  Sum_probs=85.7

Q ss_pred             cccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEE-eC-CcEEEEeecCCCCCCCCCCCCCCCCccEEE
Q 029385            9 LCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLF-NY-GMGIHLLKSEEPDNLPKAGKNINPKDNHIS   86 (194)
Q Consensus         9 ~~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~-~~-g~~~~l~~~~~~~~~~~~~~~~~~g~~hia   86 (194)
                      |..++++||+|.|+|++++++||+++|||++..+.........+.. .. +..........         ...++..|++
T Consensus         1 m~~~rldHv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~h~~   71 (162)
T d1mpya2           1 MAAVRFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTKAHDVAFIHH---------PEKGRLHHVS   71 (162)
T ss_dssp             TCCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEECTTCCEEEEEEESSSBSCSEEEEEC---------SSSSEEEEEE
T ss_pred             CCcccccEEEEECCCHHHHHHHHHHccCCEEEEEEccccccceeeeeeccccccccccccc---------CCCCccceeE
Confidence            5677899999999999999999999999999876543322222221 22 21111111111         2234789999


Q ss_pred             EeeCCHH---HHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEecCC
Q 029385           87 FQCENMA---IVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV  138 (194)
Q Consensus        87 f~v~dl~---~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~~  138 (194)
                      |.+.+++   ++.++|++.|+++..++...+....+.+||+|||||.|||++...
T Consensus        72 ~~~~~~~~~~~~~~~L~~~gv~~~~~p~~~~~g~~~~~y~~DPdGn~iEl~~~~~  126 (162)
T d1mpya2          72 FHLETWEDLLRAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSGNRNEVFCGGD  126 (162)
T ss_dssp             EECSCHHHHHHHHHHHHHHTCCEEEEEEECSSTTCEEEEEECTTSCEEEEEECCC
T ss_pred             EEEeeehhhhhHHHHHHHcCCccccCccccCCCCeEEEEEECCCCCEEEEEECCc
Confidence            9998655   778999999999887665443334489999999999999997643

>d1kw3b1 d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=99.81  E-value=6.9e-20  Score=132.13  Aligned_cols=114  Identities=13%  Similarity=0.171  Sum_probs=86.2

Q ss_pred             ccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeCCcEEEEeecCCCCCCCCCCCCCCCCccEEEEee
Q 029385           10 CLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQC   89 (194)
Q Consensus        10 ~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~~hiaf~v   89 (194)
                      .|++|+||+|.|+|++++.+||+++|||++..+.+    +..|+...+....+....          ....+..|++|.|
T Consensus         1 ~i~~L~hv~i~v~Dl~~s~~FY~~vLG~~~~~~~~----~~~~l~~~~~~~~l~~~~----------~~~~~~~h~~f~v   66 (132)
T d1kw3b1           1 SIERLGYLGFAVKDVPAWDHFLTKSVGLMAAGSAG----DAALYRADQRAWRIAVQP----------GELDDLAYAGLEV   66 (132)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET----TEEEEESSSBSCSEEEEE----------CTTCEEEEEEEEC
T ss_pred             CcccccEEEEEeCCHHHHHHHHHHHhCCceecccc----ceeeeeeeecceeeeeec----------cCCCCceEEEEEe
Confidence            37899999999999999999999999999998875    456654443222222111          2234789999999


Q ss_pred             C---CHHHHHHHHHhCCCeEEccceecCc--cceEEEEEeCCCCCEEEEEecC
Q 029385           90 E---NMAIVERRLKEMKIDYVKSRVEEGG--INVDQLFFHDPDGSMIEICNCD  137 (194)
Q Consensus        90 ~---dl~~~~~~l~~~Gi~~~~~~~~~~g--~~~~~~~~~DPDG~~iEi~~~~  137 (194)
                      +   +++++.+++++.|+++...+.....  ...+.+||.|||||.|||+..+
T Consensus        67 ~~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~DPdGn~iE~~~~~  119 (132)
T d1kw3b1          67 DDAAALERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQDPFGLPLEIYYGP  119 (132)
T ss_dssp             SSHHHHHHHHHHHHHHTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEECC
T ss_pred             ccHHHHHHHHHHHHHcCCCceecCccccccCCcceEEEEECCCCCEEEEEECC
Confidence            6   6888999999999998875542211  1237899999999999999754

>d1f1ua1 d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=99.81  E-value=1.1e-19  Score=133.00  Aligned_cols=115  Identities=16%  Similarity=0.116  Sum_probs=86.3

Q ss_pred             cccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeCCcE-EEEeecCCCCCCCCCCCCCCCCccEEEE
Q 029385            9 LCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMG-IHLLKSEEPDNLPKAGKNINPKDNHISF   87 (194)
Q Consensus         9 ~~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~g~~-~~l~~~~~~~~~~~~~~~~~~g~~hiaf   87 (194)
                      ..+++|+||.|.|+|++++++||+++|||++..+.+    ...++...+.. .+++....         ...++..|++|
T Consensus        12 ~~i~rl~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~----~~~~~~~~~~~~~~~~~~~~---------~~~~~~~h~~~   78 (146)
T d1f1ua1          12 PDIVRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDE----NTIYLRSLEEFIHHNLVLRQ---------GPIAAVAAFAY   78 (146)
T ss_dssp             CCEEEEEEEEEEESCHHHHHHHHTTTTCCEEEEECS----SEEEEECTTCCSSCSEEEEE---------CSSCEEEEEEE
T ss_pred             CCCcEEeEEEEEeCCHHHHHHHHHhccCcEEEeecC----Cceeeecccccccceeeccc---------cCCCCCceeeE
Confidence            469999999999999999999999999999999875    34444433311 11111110         22457889999


Q ss_pred             eeC---CHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEec
Q 029385           88 QCE---NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC  136 (194)
Q Consensus        88 ~v~---dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~  136 (194)
                      .+.   |++++.++|+++|+++...+........+.+||+|||||.|||+..
T Consensus        79 ~~~~~~dl~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DPdG~~iEl~~~  130 (146)
T d1f1ua1          79 RVKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRVEDPLGFPYEFFYE  130 (146)
T ss_dssp             EESSHHHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECC
T ss_pred             eeccchhHHHHHHHHHHcCCceeeccccccCCceEEEEEECCCCcEEEEEEe
Confidence            997   7899999999999998765543332233789999999999999974

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=7.1e-19  Score=131.97  Aligned_cols=130  Identities=23%  Similarity=0.281  Sum_probs=88.0

Q ss_pred             ccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEE-eC--------------------CcEEEEeecCCC
Q 029385           10 CLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLF-NY--------------------GMGIHLLKSEEP   68 (194)
Q Consensus        10 ~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~-~~--------------------g~~~~l~~~~~~   68 (194)
                      ..-+++|++|.|+|+++|++||+++|||++..+.........+.+ ..                    +....+......
T Consensus        20 ~~~~l~Hi~l~V~Dl~~si~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   99 (176)
T d1qipa_          20 KDFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWGT   99 (176)
T ss_dssp             TTCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESCCGGGSCSSHHHHHHHHTTSSSEEEEEEETTG
T ss_pred             cceEEeEEEEEeCCHHHHHHHHHHhhCCeEeeeecccCCceEEEEeecCCccccccccccccccccccccceeEEEeecc
Confidence            455799999999999999999999999998765432211211111 11                    111222221111


Q ss_pred             C--C--CCCCCCCCCCCccEEEEeeCCHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEecCCCCc
Q 029385           69 D--N--LPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPV  141 (194)
Q Consensus        69 ~--~--~~~~~~~~~~g~~hiaf~v~dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~~~p~  141 (194)
                      .  .  ..........+..|++|.++|+++++++|++.|+++..++....  +.+.+||+|||||.|||++....+.
T Consensus       100 ~~~~~~~~~~~~~~~~g~~h~~~~~~d~~~~~~~l~~~Gv~~~~~p~~g~--~~~~~f~~DPdG~~IElvq~~~~~~  174 (176)
T d1qipa_         100 EDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGK--MKGLAFIQDPDGYWIEILNPNKMAT  174 (176)
T ss_dssp             GGCTTCCCBCSSSSSCBEEEEEEECSCHHHHHHHHHHTTCEEEECTTSSS--STTCEEEECTTCCEEEEECTTTGGG
T ss_pred             ccccCcCccCCCCCccceeEEEeeHHHHHHHHHHHHHCCCEEeeCCccCC--ceEEEEEECCCCCEEEEEeCCCCCc
Confidence            1  1  11111133458899999999999999999999999998775433  2366889999999999999876543

>d2pjsa1 d.32.1.2 (A:3-113) Uncharacterized protein Atu1953 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Uncharacterized protein Atu1953
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.79  E-value=4.9e-19  Score=122.50  Aligned_cols=111  Identities=17%  Similarity=0.195  Sum_probs=82.3

Q ss_pred             cceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeCCcEEEEeecCCCCCCCCCCCCCCCCccEEEEeeC
Q 029385           11 LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQCE   90 (194)
Q Consensus        11 i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~~hiaf~v~   90 (194)
                      +++| +..|.|+|++++++||+++|||++..+.+    ....+...+....++......       ....+..|++|.++
T Consensus         1 v~ri-~~~l~v~d~~~a~~FY~~~lG~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~   68 (111)
T d2pjsa1           1 VRRV-VANIATPEPARAQAFYGDILGMPVAMDHG----WIVTHASPLEAHAQVSFAREG-------GSGTDVPDLSIEVD   68 (111)
T ss_dssp             EEEE-EEEEECSCGGGGHHHHTTTTCCCEEEECS----SEEEEEEEEEEEEEEEEESSS-------BTTBCCCSEEEEES
T ss_pred             CeEE-EEEEEeCCHHHHHHHHHHhhCCceeeccc----ceeEeccccccceeeeccccc-------CCCCceeEEEEEec
Confidence            4566 68999999999999999999999988764    223333333233333222111       22345678999999


Q ss_pred             CHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEE
Q 029385           91 NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEIC  134 (194)
Q Consensus        91 dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~  134 (194)
                      |+++++++++++|+++..++...+ ++.+.+|++|||||+|||+
T Consensus        69 dvd~~~~~l~~~g~~~~~~p~~~~-~g~~~~~~~DP~Gn~iei~  111 (111)
T d2pjsa1          69 NFDEVHARILKAGLPIEYGPVTEA-WGVQRLFLRDPFGKLINIL  111 (111)
T ss_dssp             CHHHHHHHHHHTTCCCSEEEEECT-TSCEEEEEECTTSCEEEEE
T ss_pred             CHHHHHHHHHhhccccccCCeEcC-CCcEEEEEECCCCCEEEeC
Confidence            999999999999999887765543 3458999999999999985

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

Probab=99.79  E-value=2.8e-19  Score=129.25  Aligned_cols=119  Identities=20%  Similarity=0.227  Sum_probs=81.7

Q ss_pred             eEEEEcCCHHHHHHHHHHccCCeEeeeCCCC-CcceEEEEeCCcEEEEeecCCCCCCCCCCCCCCCCccEEEEeeCC---
Q 029385           16 HISLVCRSVEASLDFYQNVLGFFPIRRPGSF-DFDGAWLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQCEN---   91 (194)
Q Consensus        16 hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~-~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~~hiaf~v~d---   91 (194)
                      .|+++|+|++++++||+++|||++..+.... .+...++...+..+++.....+...+.   ....+..|++|.|++   
T Consensus        12 RVa~pv~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~---~~~~~~~hlaf~v~~~~d   88 (137)
T d1twua_          12 RIARPTGQLDEIIRFYEEGLCLKRIGEFSQHNGYDGVMFGLPHADYHLEFTQYEGGSTA---PVPHPDSLLVFYVPNAVE   88 (137)
T ss_dssp             EEEEECSCHHHHHHHHTTTSCCCEEEEEEEETTEEEEEEESSSSSEEEEEEEETTCCCC---CCCCTTCEEEEECCCHHH
T ss_pred             EEecccCCHHHHHHHHHhccCCceeeeeccccceeEEEecCCCCceeeecccccccccc---cccccCceEEEEeCCHHH
Confidence            4666679999999999999999998765322 223344433443444433222221111   233467899999985   


Q ss_pred             HHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEecCCC
Q 029385           92 MAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVL  139 (194)
Q Consensus        92 l~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~~~  139 (194)
                      +++++++|++.|+++..++...  ++.+.+||+||||+.|||.++...
T Consensus        89 v~~~~~~l~~~G~~~~~~~~~~--~~~~~~~f~DPDG~~Iel~~~~~~  134 (137)
T d1twua_          89 LAAITSKLKHMGYQEVESENPY--WSNGGVTIEDPDGWRIVFMNSKGI  134 (137)
T ss_dssp             HHHHHHHHHHTTCCEECCSSHH--HHSSEEEEECTTCCEEEEESSCCC
T ss_pred             HHHHHHHHHHCCCeEeCCCCCC--CCceEEEEECCCCCEEEEEcCCCC
Confidence            8888999999999988755332  334789999999999999976543

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=99.78  E-value=7.4e-19  Score=127.79  Aligned_cols=114  Identities=18%  Similarity=0.264  Sum_probs=80.9

Q ss_pred             cceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEe-CCc-EEE-EeecCCCCCCCCCCCCCCCCccEEEE
Q 029385           11 LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFN-YGM-GIH-LLKSEEPDNLPKAGKNINPKDNHISF   87 (194)
Q Consensus        11 i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~-~g~-~~~-l~~~~~~~~~~~~~~~~~~g~~hiaf   87 (194)
                      |++|+||.|.|+|++++.+||+++|||++..+...    ..+... .+. ..+ .....          ...++..|++|
T Consensus         5 i~rl~Hv~l~v~D~~~s~~FY~~vLG~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~   70 (145)
T d1mpya1           5 VMRPGHVQLRVLDMSKALEHYVELLGLIEMDRDDQ----GRVYLKAWTEVDKFSLVLRE----------ADEPGMDFMGF   70 (145)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHTTCCEEEEECTT----SCEEEECTTCCBSCSEEEEE----------CSSCEEEEEEE
T ss_pred             CcEeeeEEEEeCCHHHHHHHHHHhhCCEEEEeecc----Cccceecccccceeeccccc----------cCcccceeeee
Confidence            89999999999999999999999999999988652    222222 221 111 11111          22335567777


Q ss_pred             eeC---CHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEecCC
Q 029385           88 QCE---NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV  138 (194)
Q Consensus        88 ~v~---dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~~  138 (194)
                      .+.   |+++++++|+++|+++...+........+.+||+|||||.|||++...
T Consensus        71 ~~~~~~dl~~~~~~L~~~g~~~~~~~~~~~~g~~~~~~f~DPdG~~iEl~~~~e  124 (145)
T d1mpya1          71 KVVDEDALRQLERDLMAYGCAVEQLPAGELNSCGRRVRFQAPSGHHFELYADKE  124 (145)
T ss_dssp             EESCHHHHHHHHHHHHHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESCBC
T ss_pred             eehhHHHHHHHHHHHHHCCCcEEECCCcccCCceEEEEEECCCCCEEEEEEecc
Confidence            665   899999999999999876553322222389999999999999997543

>d1klla_ d.32.1.2 (A:) Mitomycin resistance protein D, MRD {Streptomyces lavendulae [TaxId: 1914]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Mitomycin resistance protein D, MRD
species: Streptomyces lavendulae [TaxId: 1914]

Probab=99.75  E-value=2.5e-18  Score=122.49  Aligned_cols=120  Identities=13%  Similarity=0.139  Sum_probs=82.4

Q ss_pred             ceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeC--CcEEEEeecCCCC-CCCCCCCCCCCCccEEEEe
Q 029385           12 KSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNY--GMGIHLLKSEEPD-NLPKAGKNINPKDNHISFQ   88 (194)
Q Consensus        12 ~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~--g~~~~l~~~~~~~-~~~~~~~~~~~g~~hiaf~   88 (194)
                      .+|+||+|.|+|++++++||++ |||.+......   ...+.+..  +..+.+....... ..+........+..|++|.
T Consensus         1 ~ri~hv~l~V~D~~~s~~FY~~-Lg~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~   76 (128)
T d1klla_           1 ARISLFAVVVEDMAKSMEFYRK-MGVEIPAEADS---APHTEAVLDGGIRLAWDTVETVRSYDPEWQAPTGGHRFAIAFE   76 (128)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHH-TTCCCCTTGGG---CSEEEEECGGGCEEEEEEHHHHHHHCTTCCCCCSSCSCEEEEE
T ss_pred             CeEeEEEEEcCCHHHHHHHHHH-hCCcccccccc---ccceeeeccceeeeeecccccccccCCCCCCCccccceeEeee
Confidence            3689999999999999999987 89887665432   22233322  2333332211100 0111111334566899999


Q ss_pred             eCC---HHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEec
Q 029385           89 CEN---MAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC  136 (194)
Q Consensus        89 v~d---l~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~  136 (194)
                      |++   +++++++|+++|+++..++.... ++.+.+||+|||||.|||++.
T Consensus        77 v~~~~~l~~~~~~l~~~G~~~~~~p~~~~-~G~~~~~~~DPdG~~iel~~p  126 (128)
T d1klla_          77 FPDTASVDKKYAELVDAGYEGHLKPWNAV-WGQRYAIVKDPDGNVVDLFAP  126 (128)
T ss_dssp             CSSHHHHHHHHHHHHHTTCEEEEEEEECT-TSEEEEEEECTTSCEEEEEEE
T ss_pred             eccchhhHHHHHHHHhccCccccCCeEcC-CCcEEEEEECCCCCEEEEEec
Confidence            986   77789999999999988775543 456899999999999999864

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

Probab=99.74  E-value=3.5e-18  Score=121.48  Aligned_cols=116  Identities=18%  Similarity=0.219  Sum_probs=82.2

Q ss_pred             ceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeC-C-----cEEEEeecCCCCCCCCCCCCCCCCccEE
Q 029385           12 KSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNY-G-----MGIHLLKSEEPDNLPKAGKNINPKDNHI   85 (194)
Q Consensus        12 ~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~-g-----~~~~l~~~~~~~~~~~~~~~~~~g~~hi   85 (194)
                      ++|.||+|.|+|+++|++||+++|||++..+.........+.... .     ...........    .. ........++
T Consensus         2 ~r~~Hv~l~V~Dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~   76 (139)
T d2c21a1           2 RRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGV----TS-YKHDEAYGHI   76 (139)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTTTSCEEEEEEETTC----CC-CCCCSSEEEE
T ss_pred             CceEEEEEEeCCHHHHHHHHHHHhCCEeeccccccccceeeeeecccccccccccccccccCc----cc-ccCCCcccee
Confidence            589999999999999999999999999988764332223332211 1     11111111111    11 1334566789


Q ss_pred             EEeeCCHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEecC
Q 029385           86 SFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD  137 (194)
Q Consensus        86 af~v~dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~  137 (194)
                      ++.++++.++++++...++++...+   .+  .+.+||+|||||.|||++..
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~---~g--~~~~~~~DPdGn~iEl~~~~  123 (139)
T d2c21a1          77 AIGVEDVKELVADMRKHDVPIDYED---ES--GFMAFVVDPDGYYIELLNEK  123 (139)
T ss_dssp             EEEESCHHHHHHHHHHTTCCEEEEC---SS--SSEEEEECTTSCEEEEEEHH
T ss_pred             eeehhhHHHHHHHHHHcCCceeeCC---CC--cEEEEEECCCCCEEEEEECC
Confidence            9999999999999999999877643   23  37899999999999999864

>d1jifa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptomyces verticillus [TaxId: 29309]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptomyces verticillus [TaxId: 29309]

Probab=99.73  E-value=2.3e-17  Score=115.99  Aligned_cols=114  Identities=13%  Similarity=0.117  Sum_probs=84.0

Q ss_pred             cccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeCCcEEEEeecCCCCCCCCCCCCCCCCccEEEEe
Q 029385            9 LCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQ   88 (194)
Q Consensus         9 ~~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~~hiaf~   88 (194)
                      |+++.. ...|.|+|+++|++||+++|||++..+.+    ...++...+..+++......         ......+++|.
T Consensus         2 ~~~~~~-~pvL~v~Dl~~s~~FY~~vLG~~~~~~~~----~~~~~~~~~~~l~l~~~~~~---------~~~~~~~~~~~   67 (122)
T d1jifa_           2 VKFLGA-VPVLTAVDVPANVSFWVDTLGFEKDFGDR----DFAGVRRGDIRLHISRTEHQ---------IVADNTSAWIE   67 (122)
T ss_dssp             CCEEEE-EEEEEESSHHHHHHHHHHTTCCEEEEECS----SEEEEEETTEEEEEEECSCH---------HHHTTCEEEEE
T ss_pred             ccceee-EEEEEcCCHHHHHHHHHhhhCCceEecCC----ceeEeeeeeeeeeeeccccc---------cccceeEEEEe
Confidence            344443 23599999999999999999999998875    45566666777777765432         12345689999


Q ss_pred             eCCHHHHHHHHHhCCCeEEccce------ecCccceEEEEEeCCCCCEEEEEec
Q 029385           89 CENMAIVERRLKEMKIDYVKSRV------EEGGINVDQLFFHDPDGSMIEICNC  136 (194)
Q Consensus        89 v~dl~~~~~~l~~~Gi~~~~~~~------~~~g~~~~~~~~~DPDG~~iEi~~~  136 (194)
                      ++|++.+++++.+.++.......      .....+.+.+||+|||||+||+++.
T Consensus        68 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~DPdGn~ief~~~  121 (122)
T d1jifa_          68 VTDPDALHEEWARAVSTDYADTSGPAMTPVGESPAGREFAVRDPAGNCVHFTAG  121 (122)
T ss_dssp             ESCHHHHHHHHHTTSCSCTTCTTSCEECCCEEETTEEEEEEECTTCCEEEEEEC
T ss_pred             echhHHHHHHHHhhcceEEeeccccccCccccCCCeEEEEEECCCCCEEEEEeC
Confidence            99999999999999876543321      0111235899999999999999875

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=99.73  E-value=2.2e-17  Score=124.49  Aligned_cols=119  Identities=22%  Similarity=0.286  Sum_probs=79.1

Q ss_pred             ccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcc--eEEEEeCCcEEEEeecCCCCCCCCCCCCCCCCccEEEE
Q 029385           10 CLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFD--GAWLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISF   87 (194)
Q Consensus        10 ~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~--~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~~hiaf   87 (194)
                      .+.+|+||+|.|+|++++.+|| ++|||++..+....+..  ..|....+....+....          ...++.+|++|
T Consensus         2 ~i~rl~Hv~l~v~Dle~s~~FY-e~LGf~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~----------~~~~~~~H~~f   70 (176)
T d1f1ua2           2 ELVRLDHFNQVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQTVHDTALTG----------GNGPRMHHVAF   70 (176)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHH-HHTTCEEEEEEECTTCCEEEEEEESSSSSCSEEEEE----------SSBSEEEEEEE
T ss_pred             ceeEeeeEEEEcCCHHHHHHHH-HHCCCEEEEEEecCCcceeeeeeccCccccceeccc----------ccCCCccceeE
Confidence            3678999999999999999999 57999987654322111  22222222111221111          22457899999


Q ss_pred             eeCC---HHHHHHHHHhCCCeE--EccceecCccceEEEEEeCCCCCEEEEEecCCC
Q 029385           88 QCEN---MAIVERRLKEMKIDY--VKSRVEEGGINVDQLFFHDPDGSMIEICNCDVL  139 (194)
Q Consensus        88 ~v~d---l~~~~~~l~~~Gi~~--~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~~~  139 (194)
                      .+.+   +.++.++|++.|+..  ...+..........+||+|||||+|||+.....
T Consensus        71 ~~~~~~~v~~~~~~l~~~g~~~~~~~~p~~h~~g~~~~~Y~~DPdG~~iEl~~~~~~  127 (176)
T d1f1ua2          71 ATHEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDGHRIEIYTQDYY  127 (176)
T ss_dssp             ECSSHHHHHHHHHHHHHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEECCCC
T ss_pred             EeccchhHHHHHHHHHHcCCceeeeecccccCCCCceEEEEECCCCCEEEEEeCCcc
Confidence            9995   555667889999853  333333222234789999999999999986544

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=99.72  E-value=3.2e-17  Score=121.72  Aligned_cols=132  Identities=9%  Similarity=0.055  Sum_probs=95.9

Q ss_pred             CCcccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCc--c-eEEE-EeCCcEEEEeecCCCCCCCCC-----CCC
Q 029385            7 NPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDF--D-GAWL-FNYGMGIHLLKSEEPDNLPKA-----GKN   77 (194)
Q Consensus         7 ~~~~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~--~-~~~~-~~~g~~~~l~~~~~~~~~~~~-----~~~   77 (194)
                      .|+.+++|+||+|.|+|+++|++||+++|||+++.+......  . ..++ ...+..+.+.+...+......     ...
T Consensus         1 ~p~~i~~idHv~i~V~D~~~a~~fY~~~lGf~~v~~~~~~~~~~~~~~~~l~~~~~~i~l~~~~~~~~~~~~~~~~~~~~   80 (163)
T d1t47a1           1 DPFPVKGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSARFVLTSVIKPATPWGHFLADHVAE   80 (163)
T ss_dssp             CCSCCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEEESSCCSHHHHHHHHHHHH
T ss_pred             CCCCCceEeEEEEEeCCHHHHHHHHHHHhCCeEEeeecccccceeEEEEEEecCCEEEEEeccCCCCCccccccchhhhc
Confidence            367899999999999999999999999999998876432111  1 2233 334456666665433221100     012


Q ss_pred             CCCCccEEEEeeCCHHHHHHHHHhCCCeEEccceec--CccceEEEEEeCCCCCEEEEEecCC
Q 029385           78 INPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEE--GGINVDQLFFHDPDGSMIEICNCDV  138 (194)
Q Consensus        78 ~~~g~~hiaf~v~dl~~~~~~l~~~Gi~~~~~~~~~--~g~~~~~~~~~DPDG~~iEi~~~~~  138 (194)
                      ...|..||||.|+|+++++++|+++|+++..++...  .+...+..++++|+|..++|++..+
T Consensus        81 ~g~G~~hiaf~VdDid~a~~~l~~~Ga~~~~~P~~~~d~~G~v~~a~I~~~g~~~~~lier~~  143 (163)
T d1t47a1          81 HGDGVVDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEHGTVVLAAIATYGKTRHTLVDRTG  143 (163)
T ss_dssp             HCSEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEEE
T ss_pred             CCCceEEEEEeeCCHHHHHHHHHHCCCeEEecCcceeCCCCEEEEEEEecCCCceEEEEeccC
Confidence            346889999999999999999999999988876532  3334578899999999999988543

>d1kw3b2 d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=99.72  E-value=2e-17  Score=122.44  Aligned_cols=125  Identities=13%  Similarity=0.079  Sum_probs=81.2

Q ss_pred             cceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCC-----CcceEEEEeCCcEEEEeecCCCCCCCCCCCCCCCCccEE
Q 029385           11 LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSF-----DFDGAWLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHI   85 (194)
Q Consensus        11 i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~-----~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~~hi   85 (194)
                      ..+|+||+|.|+|++++.+||+++|||++..+....     .....|+........+....         .+..++++|+
T Consensus         8 ~~GlgHv~l~v~D~e~t~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~a~~~---------~~~~~gl~Hi   78 (156)
T d1kw3b2           8 DQGIGHFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNGRHHTIALAA---------FPIPKRIHHF   78 (156)
T ss_dssp             GGCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSBSCSEEEEC---------CSCSSSEEEE
T ss_pred             CCCcceEEEecCCHHHHHHHHHHhcCceeeeEEeeccCCCCcceeEEEeeccccceeeecc---------CCCCCceeEE
Confidence            468999999999999999999999999987653200     00111221111111111111         0234589999


Q ss_pred             EEeeC---CHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCC-EEEEEecCCCCcCcCC
Q 029385           86 SFQCE---NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGS-MIEICNCDVLPVVPLA  145 (194)
Q Consensus        86 af~v~---dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~-~iEi~~~~~~p~~p~~  145 (194)
                      ||+|+   ++.+++++|+++|+.+..+ .........++|++||||+ .+|+........+.|.
T Consensus        79 af~v~~~ddv~~~~d~l~~~G~~~~g~-~rH~~~~~~s~Y~~DP~G~~~~E~~~~~~~~d~~w~  141 (156)
T d1kw3b2          79 MLQANTIDDVGYAFDRLDAAGRITSLL-GRHTNDQTLSFYADTPSPMIEVEFGWGPRTVDSSWT  141 (156)
T ss_dssp             EEEBSSHHHHHHHHHHHHHTTCBCBCS-EEESSSCCEEEEEECSSTTCEEEEEECCCBCCTTCC
T ss_pred             EEECCCHHHHHHHHHHHHhcCCceecC-cccCCCCeEEEEEECCCCCeEEEEecCCcccCCCCC
Confidence            99998   4556789999999876543 3332223479999999998 5999876544444443

>d1ecsa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.71  E-value=2.1e-16  Score=111.10  Aligned_cols=108  Identities=19%  Similarity=0.227  Sum_probs=81.4

Q ss_pred             EEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeCCcEEEEeecCCCCCCCCCCCCCCCCccEEEEeeCCHHHHH
Q 029385           17 ISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQCENMAIVE   96 (194)
Q Consensus        17 v~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~~hiaf~v~dl~~~~   96 (194)
                      ..|.|+|+++|.+||++ |||++....+    ...++...+..+++.......        ......++++.++++++++
T Consensus         6 p~l~v~Dl~~s~~FY~~-LGf~~~~~~~----~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~d~~~~~   72 (120)
T d1ecsa_           6 PNLPSRDFDSTAAFYER-LGFGIVFRDA----GWMILQRGDLMLEFFAHPGLD--------PLASWFSCCLRLDDLAEFY   72 (120)
T ss_dssp             EEEEESCHHHHHHHHHT-TTCEEEEECS----SEEEEEETTEEEEEEECTTCC--------GGGCCCEEEEEESCHHHHH
T ss_pred             EEEEeCCHHHHHHHHHH-cCCeeEEecC----ceeeeecceeccccccccccc--------cCCCCcEEEEEECCHHHHH
Confidence            34999999999999998 9999998764    445555566566666544321        1234568999999999999


Q ss_pred             HHHHhCCCeEEccc------eecCccceEEEEEeCCCCCEEEEEecC
Q 029385           97 RRLKEMKIDYVKSR------VEEGGINVDQLFFHDPDGSMIEICNCD  137 (194)
Q Consensus        97 ~~l~~~Gi~~~~~~------~~~~g~~~~~~~~~DPDG~~iEi~~~~  137 (194)
                      +.+++.|+.+....      .....++.+.+||+|||||+|||.+.+
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~~~~~DPDGn~iei~q~d  119 (120)
T d1ecsa_          73 RQCKSVGIQETSSGYPRIHAPELQGWGGTMAALVDPDGTLLRLIQNE  119 (120)
T ss_dssp             HHHHHTTCCBCSSSSSEEEEEEECTTSSEEEEEECTTSCEEEEEECC
T ss_pred             HHHhhhhhhhccccccccccceecCCCcEEEEEECCCCCEEEEEEcc
Confidence            99999988865432      122334568999999999999999864

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=9e-17  Score=117.41  Aligned_cols=131  Identities=13%  Similarity=0.085  Sum_probs=93.0

Q ss_pred             CcccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCc--ceE-E-EEeCCcEEEEeecCCCCCCCCCC--CCCCCC
Q 029385            8 PLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDF--DGA-W-LFNYGMGIHLLKSEEPDNLPKAG--KNINPK   81 (194)
Q Consensus         8 ~~~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~--~~~-~-~~~~g~~~~l~~~~~~~~~~~~~--~~~~~g   81 (194)
                      .-++.+++||+|.|+|++++++||+++|||++..+......  ... . +...+..+.++........+...  .....|
T Consensus         6 ~~~~~~~dHi~i~V~Dl~~a~~fY~~~lGf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~G   85 (149)
T d1sqia1           6 RGRFLHFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQGKIVFVLCSALNPWNKEMGDHLVKHGDG   85 (149)
T ss_dssp             SCEEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEEESSTTCHHHHHHHHHHCSE
T ss_pred             CCceeeEeEEEEEcCCHHHHHHHHhhccceEEEEEecccCCceEEEEEEecCCcEEEEEEeccCCCCchhhhhhhhCCCe
Confidence            34688999999999999999999999999999876542111  111 2 22344556666544333221110  123568


Q ss_pred             ccEEEEeeCCHHHHHHHHHhCCCeEEccceec--CccceEEEEEeCCCCCEEEEEecCC
Q 029385           82 DNHISFQCENMAIVERRLKEMKIDYVKSRVEE--GGINVDQLFFHDPDGSMIEICNCDV  138 (194)
Q Consensus        82 ~~hiaf~v~dl~~~~~~l~~~Gi~~~~~~~~~--~g~~~~~~~~~DPDG~~iEi~~~~~  138 (194)
                      ..||||.|+|+++++++|+++|+++..++...  .+...+.++++.|+|..+++++...
T Consensus        86 ~~hiaf~V~di~~~~~~l~~~G~~~~~~P~~~~d~~G~v~~a~i~~~g~~~~~lier~~  144 (149)
T d1sqia1          86 VKDIAFEVEDCEHIVQKARERGAKIVREPWVEEDKFGKVKFAVLQTYGDTTHTLVEKIN  144 (149)
T ss_dssp             EEEEEEEEECHHHHHHHHHHHTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEES
T ss_pred             EEEEEEEeccHHHHHHHHHHCCCEEccCCeEEECCCCeEEEEEEECCCCCEEEEEEeCC
Confidence            89999999999999999999999988776432  2223467788888899999998654

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.68  E-value=6e-16  Score=115.08  Aligned_cols=135  Identities=10%  Similarity=0.058  Sum_probs=95.5

Q ss_pred             CCCCCCCcccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCc---ceEEEEeCC-cEEEEeecCCCCC-------
Q 029385            2 KESVENPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDF---DGAWLFNYG-MGIHLLKSEEPDN-------   70 (194)
Q Consensus         2 ~~~~~~~~~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~---~~~~~~~~g-~~~~l~~~~~~~~-------   70 (194)
                      |+....++.+++++||+|.|+|++++++||+++|||+.+.+......   ........+ ..+.+........       
T Consensus         1 ~~p~~~~~~i~~~dHv~i~V~Dle~a~~fY~~~LGf~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~   80 (167)
T d1sqda1           1 KNPKSDKFKVKRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGDLRFLFTAPYSPSLSAGEIKP   80 (167)
T ss_dssp             CCCCCCSSCEEEEEEEEEECSCHHHHHHHHHHHHTCEEEEEESGGGTCSSEEEEEEEETTEEEEEEEECCGGGTTTCCGG
T ss_pred             CCCCCCCCCCceEeEEEEEeCCHHHHHHHHHHHhCCeEEEEeeccCCCeeEEEEEeeCCCeeEEEecccccccccccccc
Confidence            34556789999999999999999999999999999998887542211   112223333 3333332211110       


Q ss_pred             -----CCCCC--------CCCCCCccEEEEeeCCHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEecC
Q 029385           71 -----LPKAG--------KNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD  137 (194)
Q Consensus        71 -----~~~~~--------~~~~~g~~hiaf~v~dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~  137 (194)
                           .+...        .....|..||||.|+|+++++++|+++|+++..+|....+ +.+..+++.+++..++++++.
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~G~~Hiaf~VdDi~aa~~~l~~~G~~~~~~P~~~~~-~~~~a~I~~~gd~~~~~v~r~  159 (167)
T d1sqda1          81 TTTASIPSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGAIPSSPPIVLNE-AVTIAEVKLYGDVVLRYVSYK  159 (167)
T ss_dssp             GCCCSSTTCCHHHHHHHHHHHCSEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEEETT-TEEEEEEEEETTEEEEEEEEC
T ss_pred             ccccccccCCcchHHHhhhccCCCceEEEEEeCCHHHHHHHHHHCCCEEecCCeecCC-CEEEEEEEccCCcEEEEEecC
Confidence                 00000        0123589999999999999999999999999988765543 347789999999999999874

>d1xrka_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptoalloteichus hindustanus [TaxId: 2017]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptoalloteichus hindustanus [TaxId: 2017]

Probab=99.64  E-value=6.6e-15  Score=102.46  Aligned_cols=105  Identities=15%  Similarity=0.230  Sum_probs=77.8

Q ss_pred             eEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeCCcEEEEeecCCCCCCCCCCCCCCCCccEEEEeeCCHHHH
Q 029385           16 HISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQCENMAIV   95 (194)
Q Consensus        16 hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~~hiaf~v~dl~~~   95 (194)
                      +..|.|+|+++|++||+++|||++..+.+    ...++...+..+++......         ...+..++.+.+++++.+
T Consensus         7 ~pvL~v~D~~~s~~FY~~~LG~~~~~~~~----~~~~~~~~~~~l~~~~~~~~---------~~~~~~~~~~~~~~~~~~   73 (120)
T d1xrka_           7 VPVLTARDVAEAVEFWTDRLGFSRVFVED----DFAGVVRDDVTLFISAVQDQ---------VVPDNTQAWVWVRGLDEL   73 (120)
T ss_dssp             EEEEEESCHHHHHHHHHHTTCCEEEEECS----SEEEEEETTEEEEEEECSCT---------TTGGGCEEEEEEECHHHH
T ss_pred             EEEEEECCHHHHHHHHHHhhCCeEEEECC----CeeEEecccceeeccccccc---------cCCCCceEEEeeccHHHH
Confidence            45699999999999999999999999875    44555566666777655432         123556899999999999


Q ss_pred             HHHHHhCCCeEE--------ccceecCccceEEEEEeCCCCCEEEEEe
Q 029385           96 ERRLKEMKIDYV--------KSRVEEGGINVDQLFFHDPDGSMIEICN  135 (194)
Q Consensus        96 ~~~l~~~Gi~~~--------~~~~~~~g~~~~~~~~~DPDG~~iEi~~  135 (194)
                      ...+.+.+....        .++...+ + .+.+||+|||||.||++.
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-g~~~~~~DPdGn~ief~~  119 (120)
T d1xrka_          74 YAEWSEVVSTNFRDASGPAMTEIVEQP-W-GREFALRDPAGNCVHFVA  119 (120)
T ss_dssp             HHHHTTTSBSCTTTCSSCEECCCEEET-T-EEEEEEECTTCCEEEEEE
T ss_pred             HHHHHHhhhHHhhhcccccccCceecC-C-EEEEEEECCCCCEEEEEE
Confidence            888776655433        2332322 2 389999999999999986

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=99.64  E-value=3.5e-15  Score=111.68  Aligned_cols=135  Identities=7%  Similarity=0.006  Sum_probs=95.4

Q ss_pred             CCCCCCcccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCc---ceEEEEeC-CcEEEEeecCCCCCCCCCC---
Q 029385            3 ESVENPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDF---DGAWLFNY-GMGIHLLKSEEPDNLPKAG---   75 (194)
Q Consensus         3 ~~~~~~~~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~---~~~~~~~~-g~~~~l~~~~~~~~~~~~~---   75 (194)
                      +..+....+++++||+|.|+|++++++||+++|||+.+.+......   ...+.+.. +..+.+.............   
T Consensus         3 ~~~~d~~~i~~~~Hi~i~V~D~e~a~~FY~~~LGf~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (172)
T d1sp8a1           3 NPRSDRFHTLAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGSLSFLFTAPYAHGADAATAALP   82 (172)
T ss_dssp             CCCCCSSCEEEEEEEEEECSCHHHHHHHHHHHHTCCEEEEESGGGTCCSEEEEEEEETTEEEEEEEECCSSCCGGGCSST
T ss_pred             CCCCccCCcCEEEEEEEEeCCHHHHHHHHHHhhCceEEEEecccccceeEEEEEeccCCeeeEEeeccCCCchhhhcccc
Confidence            3456678899999999999999999999999999999876542111   11222332 3334443322211110000   


Q ss_pred             -----------CCCCCCccEEEEeeCCHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEecCC
Q 029385           76 -----------KNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV  138 (194)
Q Consensus        76 -----------~~~~~g~~hiaf~v~dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~~  138 (194)
                                 .....|..||||+|+|+++++++|+++|+++..++....+ +.+..+++.|.+..+++++..+
T Consensus        83 ~~~~~~~~~~~~~~g~Gi~Hiaf~VdDi~aa~~~l~~~Ga~~~~~P~~~~~-g~~~a~v~~~g~~~~~lve~~~  155 (172)
T d1sp8a1          83 SFSAAAARRFAADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPVDLGR-GFRLAEVELYGDVVLRYVSYPD  155 (172)
T ss_dssp             TCCHHHHHHHHHHHSSEEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEEET-TEEEEEEEEETTEEEEEEECCT
T ss_pred             cCCcchhhhhhhhcCCceEEEEEeeCcHHHHHHHHHHCcCEeccCCccCCC-CEEEEEEECCCCcEEEEEecCC
Confidence                       0124588999999999999999999999999888755433 4588888888888899999875

>d1cjxa1 d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.52  E-value=4.8e-15  Score=108.92  Aligned_cols=125  Identities=15%  Similarity=0.248  Sum_probs=93.0

Q ss_pred             CCCcccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEEEeCCcEEEEeecCCCCCCCCC-CCCCCCCccE
Q 029385            6 ENPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWLFNYGMGIHLLKSEEPDNLPKA-GKNINPKDNH   84 (194)
Q Consensus         6 ~~~~~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~-~~~~~~g~~h   84 (194)
                      .+||.+.+|+||.+.|+|++++.+||++ |||+.+.+..+   ....++..| .+.++....+.+.... .....++..|
T Consensus         2 ~np~g~~Gidhv~fav~d~~~~~~~~~~-lGF~~~~~~~~---~~~~l~~~G-~i~ll~~~~~~s~~~~~~~~hg~gv~h   76 (150)
T d1cjxa1           2 ENPMGLMGFEFIEFASPTPGTLEPIFEI-MGFTKVATHRS---KNVHLYRQG-EINLILNNEPNSIASYFAAEHGPSVCG   76 (150)
T ss_dssp             CCTTCEEEEEEEEEECSSTTSSHHHHHH-TTCEEEEEESS---SSEEEEEET-TEEEEEECCSSSHHHHHHHHHSSEEEE
T ss_pred             CCCCccCCEEEEEEecCCHHHHHHHHHH-hCCEEEecccc---eEEEEEecC-cEEEEecCCCCCHhHhHHhhCCCceEE
Confidence            3688999999999999999999999987 99999887542   234444555 3444443333221111 0245689999


Q ss_pred             EEEeeCCHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEecC
Q 029385           85 ISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD  137 (194)
Q Consensus        85 iaf~v~dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~  137 (194)
                      |||+|+|++++++++.++|+++...+...+.  .....+++|+|.++.+++..
T Consensus        77 iaf~V~D~~~a~~~a~~~Ga~~i~~~~~~g~--~~~~~i~g~gg~~i~Fv~~~  127 (150)
T d1cjxa1          77 MAFRVKDSQKAYNRALELGAQPIHIDTGPME--LNLPAIKGIGGAPLYLIDRF  127 (150)
T ss_dssp             EEEEESCHHHHHHHHHHTTCCBCCCCCCTTC--BCCCEEECGGGCEEEEECCC
T ss_pred             EEEEeCCHHHHHHHHHHCCCEEcccCCCCCc--eeeeEEEcCCCCEEEEECcC
Confidence            9999999999999999999998876644333  25667899999999999753

>d1xy7a_ d.32.1.9 (A:) Hypothetical protein At5g48480 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein At5g48480
domain: Hypothetical protein At5g48480
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.49  E-value=1.5e-13  Score=98.21  Aligned_cols=117  Identities=9%  Similarity=-0.036  Sum_probs=74.9

Q ss_pred             eEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcc---------eEEEEeCCcEEEEeecCCCCCCCCCCCCCCCCccEEE
Q 029385           16 HISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFD---------GAWLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHIS   86 (194)
Q Consensus        16 hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~---------~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~~hia   86 (194)
                      ++.+.+.|++++++||+++||++++.+....+..         .+-+...+..+.+...... ...... .......+++
T Consensus        10 ~l~v~~~~~~eAi~FY~~~fG~~~~~~~~~~~~~~~~~~~~~~~a~l~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~l~   87 (135)
T d1xy7a_          10 MLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLAGSSFVVCDVSSL-PGFSTA-KSEGSGVTFL   87 (135)
T ss_dssp             EEEECTTCHHHHHHHHHHHHCCEEC---------------CCCEEEEEETTEEEEEEEGGGS-TTCCCC-CTTSCCCEEE
T ss_pred             EEEEECCCHHHHHHHHHHHhCCEEEEEEecCCccccccCCcEEEEEEEECCeeeeccccccc-cccccC-CCCCcceEEE
Confidence            4566667999999999999999988765321110         0111122333333332211 111111 2233456999


Q ss_pred             EeeCCHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEe
Q 029385           87 FQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICN  135 (194)
Q Consensus        87 f~v~dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~  135 (194)
                      +.|+|+++++.++.+.|.++..++... .++.+.++++||+|+.|+|.+
T Consensus        88 ~~v~d~~~~~~~~~~~g~~~~~~~~~~-~~g~~~~~v~Dp~G~~W~i~e  135 (135)
T d1xy7a_          88 LGTKDAEAAVAKAVDAGAVKVEVTEAE-VELGFKGKVTDPFGVTWIFAE  135 (135)
T ss_dssp             EECSCHHHHHHHHHHTTCEECCCCHHH-HHTTEEEEEECTTSCEEEEEC
T ss_pred             EeecCcceeEEEeecccceEecCcccc-cccCEEEEEECCCCCEEEEeC
Confidence            999999999999999999998876443 344589999999999999975

>d1sp8a2 d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=99.10  E-value=8.4e-11  Score=91.19  Aligned_cols=97  Identities=10%  Similarity=0.143  Sum_probs=65.1

Q ss_pred             CcccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCC----cc--eEEEEeC---CcEEEEeecCCCCCCCCCC---
Q 029385            8 PLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFD----FD--GAWLFNY---GMGIHLLKSEEPDNLPKAG---   75 (194)
Q Consensus         8 ~~~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~----~~--~~~~~~~---g~~~~l~~~~~~~~~~~~~---   75 (194)
                      ...+++|+||++.|+|++++++||+++|||+...+....+    ..  ...+...   ...+.+.+...+.......   
T Consensus         4 d~Gl~~IDHI~i~V~dld~a~~fY~~vLGf~~~~~~~~~~i~~~~~~l~s~v~~~~~g~v~~~l~E~~~~~~~~s~i~~F   83 (224)
T d1sp8a2           4 DYGLSRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSENVLLPLNEPVHGTKRRSQIQTF   83 (224)
T ss_dssp             CCSEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEC--------CEEEEEEECSSSCCEEEEEEECCCSSSCCHHHHH
T ss_pred             CCCcCeeeeeEEeccCHHHHHHHHHHHhCCEEEEEeccccccccceeEEEEEEEcCCCccceeeeeecCCCCCccHHHHH
Confidence            3569999999999999999999999999999876532111    11  1111211   2455666543332211100   


Q ss_pred             --CCCCCCccEEEEeeCCHHHHHHHHHhCCC
Q 029385           76 --KNINPKDNHISFQCENMAIVERRLKEMKI  104 (194)
Q Consensus        76 --~~~~~g~~hiaf~v~dl~~~~~~l~~~Gi  104 (194)
                        ...++|+.||||.|+||.+..+.|+++|+
T Consensus        84 L~~~~g~GiqHIAf~vdDI~~av~~L~arGv  114 (224)
T d1sp8a2          84 LDHHGGPGVQHMALASDDVLRTLREMQARSA  114 (224)
T ss_dssp             HHHHTSSEEEEEEEEETTHHHHHHHHHTSGG
T ss_pred             HHhccCCCceeEEEEeCCHHHHHHHHHhccc
Confidence              12357899999999999999999998764

>d1sqia2 d.32.1.3 (A:157-366) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.07  E-value=1.7e-10  Score=88.50  Aligned_cols=128  Identities=16%  Similarity=0.199  Sum_probs=82.3

Q ss_pred             CcccceeeeEEEEcCC--HHHHHHHHHHccCCeEeeeCCCCCc----c---eEEEEeCC--cEEEEeecCCCCCCCCC--
Q 029385            8 PLCLKSLNHISLVCRS--VEASLDFYQNVLGFFPIRRPGSFDF----D---GAWLFNYG--MGIHLLKSEEPDNLPKA--   74 (194)
Q Consensus         8 ~~~i~~i~hv~l~v~D--le~s~~FY~~vLG~~~~~~~~~~~~----~---~~~~~~~g--~~~~l~~~~~~~~~~~~--   74 (194)
                      +..+++|+||++.|++  ++++++||+++|||+.....+..+.    .   ...+....  ..+.+...... .....  
T Consensus        19 ~~gl~~IDHv~~~Vp~~~ld~av~fY~~vfGf~~~~~~~~~~i~~~~~~l~s~~l~s~~~~i~~~lne~~~~-~~~sqi~   97 (210)
T d1sqia2          19 SCNLEIIDHIVGNQPDQEMESASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESIKMPINEPAPG-RKKSQIQ   97 (210)
T ss_dssp             CCCEEEEEEEEEECCTTCHHHHHHHHHHHHCCEEECCC-----------CEEEEEECTTSCCEEEEEECC------CHHH
T ss_pred             CCCcceeCceEeccCchhHHHHHHHHHHHhCCEEEEEecccccCCceeEEEEEEEEecCccccccccccCCC-CcccHHH
Confidence            3578999999999997  9999999999999987765321111    1   11122222  33444432211 11100  


Q ss_pred             ---CCCCCCCccEEEEeeCCHHHHHHHHHhCCCeEEccceecC---------------c-----cceEEEEEeCCCCCEE
Q 029385           75 ---GKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEG---------------G-----INVDQLFFHDPDGSMI  131 (194)
Q Consensus        75 ---~~~~~~g~~hiaf~v~dl~~~~~~l~~~Gi~~~~~~~~~~---------------g-----~~~~~~~~~DPDG~~i  131 (194)
                         ....++|+.||||.|+||.++.++|+++|+++...+....               .     .....+|-.|.+|.++
T Consensus        98 ~fl~~~~G~GiQHIAf~t~DI~~av~~L~~~Gv~fL~~P~~YY~~l~~r~~~~~~~~~~~~~~l~~~~IL~D~d~~g~ll  177 (210)
T d1sqia2          98 EYVDYNGGAGVQHIALRTEDIITTIRHLRERGMEFLAVPSSYYRLLRENLKTSKIQVKENMDVLEELKILVDYDEKGYLL  177 (210)
T ss_dssp             HHHHHHTSSEEEEEEEEESCHHHHHHHHHHHTCCBCCCCHHHHHHHHHHHHTCSSCCCSCHHHHHHHTCEEECCTTCEEE
T ss_pred             HHHhhcCCCCeeEEEEEcCCHHHHHHHHHHcCCCCCCCCcchhhhHHhhhhcccccccccHHHHHhcCEEEecCCCCeEE
Confidence               0134678999999999999999999999999886652100               0     0124567777888888


Q ss_pred             EEEec
Q 029385          132 EICNC  136 (194)
Q Consensus       132 Ei~~~  136 (194)
                      .|++.
T Consensus       178 qifT~  182 (210)
T d1sqia2         178 QIFTK  182 (210)
T ss_dssp             EEEBC
T ss_pred             EEeec
Confidence            88875

>d1t47a2 d.32.1.3 (A:179-377) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=99.07  E-value=2.8e-10  Score=86.60  Aligned_cols=101  Identities=9%  Similarity=0.187  Sum_probs=67.5

Q ss_pred             ccceeeeEEEEcC--CHHHHHHHHHHccCCeEeeeCCC----CCcc--eEEEEe-CC--cEEEEeecCCCCCCCCC----
Q 029385           10 CLKSLNHISLVCR--SVEASLDFYQNVLGFFPIRRPGS----FDFD--GAWLFN-YG--MGIHLLKSEEPDNLPKA----   74 (194)
Q Consensus        10 ~i~~i~hv~l~v~--Dle~s~~FY~~vLG~~~~~~~~~----~~~~--~~~~~~-~g--~~~~l~~~~~~~~~~~~----   74 (194)
                      .+++|+||++.|+  ++++++.||+++|||+.......    ....  ...... ..  ..+.+............    
T Consensus         3 ~f~~IDHia~avp~~~l~~av~fY~~vfGf~~~~~~~~~di~~~~~~l~s~~~~s~~~~v~l~lne~~~~~~~s~i~~FL   82 (199)
T d1t47a2           3 TFQAIDHCVGNVELGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADGTLKVKFPINEPALAKKKSQIDEYL   82 (199)
T ss_dssp             SCCEEEEEEEECCTTCHHHHHHHHHHHHCCEECSCCBCHHHHTTTTSEEEEEEECTTSCSEEEEEEECCSSSCCHHHHHH
T ss_pred             cceeeCceEeccChhhHHHHHHHHHHHhCCeEeeEecccccccceeEEEEeeccccccccceeecccCccccccchhhhh
Confidence            4789999999998  99999999999999988765321    0111  112222 21  23333322211100000    


Q ss_pred             CCCCCCCccEEEEeeCCHHHHHHHHHhCCCeEEccc
Q 029385           75 GKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSR  110 (194)
Q Consensus        75 ~~~~~~g~~hiaf~v~dl~~~~~~l~~~Gi~~~~~~  110 (194)
                      ....++|+.||||.|+|+.++.++|+++|+++...|
T Consensus        83 ~~~~g~GiQHIAl~tdDI~~av~~L~~~G~~fL~~p  118 (199)
T d1t47a2          83 EFYGGAGVQHIALNTGDIVETVRTMRAAGVQFLDTP  118 (199)
T ss_dssp             HHHTSCEEEEEEEECSCHHHHHHHHHHTTCCBCCCC
T ss_pred             hhcCCCcceEEEEEcCCHHHHHHHHHHcCCCCCCCC
Confidence            013457999999999999999999999999988766

>d1cjxa2 d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.06  E-value=8.4e-11  Score=89.92  Aligned_cols=101  Identities=13%  Similarity=0.146  Sum_probs=67.6

Q ss_pred             ccceeeeEEEEcC--CHHHHHHHHHHccCCeEeeeCCCCC-cc---eEEEEeC--CcEEEEeecCCCCCCCCC---CCCC
Q 029385           10 CLKSLNHISLVCR--SVEASLDFYQNVLGFFPIRRPGSFD-FD---GAWLFNY--GMGIHLLKSEEPDNLPKA---GKNI   78 (194)
Q Consensus        10 ~i~~i~hv~l~v~--Dle~s~~FY~~vLG~~~~~~~~~~~-~~---~~~~~~~--g~~~~l~~~~~~~~~~~~---~~~~   78 (194)
                      .+++|+||++.|+  |+++++.||+++|||+.....+-.+ ..   ...+...  +..+.+..........-.   ....
T Consensus         2 Gl~~IDHIa~~V~~~~l~~a~~FY~~vlGf~~~~~~di~~~~~~l~s~~~~~~~~~~~~~l~~~~~~~~sqi~~fl~~~~   81 (203)
T d1cjxa2           2 GLKVIDHLTHNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAPDGMIRIPLNEESSKGAGQIEEFLMQFN   81 (203)
T ss_dssp             SEEEEEEECEECCTTHHHHHHHHHHHHHCCEEEEEEEEECSSCEEEEEEEECTTSSCEEEEEEECTTCCSHHHHHHHHHT
T ss_pred             CCCeeCeeEeccChhhHHHHHHHHHHHhCCEEeEEEecCCCcceEEEEEeeccccccceecccCCCCCccHHHHHHHhcC
Confidence            3789999999998  9999999999999999877642111 11   1112222  223333333221111000   0124


Q ss_pred             CCCccEEEEeeCCHHHHHHHHHhCCCeEEccc
Q 029385           79 NPKDNHISFQCENMAIVERRLKEMKIDYVKSR  110 (194)
Q Consensus        79 ~~g~~hiaf~v~dl~~~~~~l~~~Gi~~~~~~  110 (194)
                      ++|+.||||.|+|+.++.++|+++|+++...+
T Consensus        82 g~GiqHIAf~vdDI~aav~~L~~~Gv~fL~~p  113 (203)
T d1cjxa2          82 GEGIQHVAFLTDDLVKTWDALKKIGMRFMTAP  113 (203)
T ss_dssp             SSBCCEEEEEESCHHHHHHHHHHTTCCBCCCC
T ss_pred             CCCCceEEEEeCCHHHHHHHHHhcCCccccCc
Confidence            57899999999999999999999999987654

>d1u6la_ d.32.1.7 (A:) Hypothetical protein PA1353 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1353
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.96  E-value=2.6e-08  Score=70.57  Aligned_cols=112  Identities=13%  Similarity=-0.059  Sum_probs=70.8

Q ss_pred             EEEcC-CHHHHHHHHHHccCCeEeeeCCCCCcc----------e----EEEEeCCcEEEEeecCCCCCCCCCCCCCCCCc
Q 029385           18 SLVCR-SVEASLDFYQNVLGFFPIRRPGSFDFD----------G----AWLFNYGMGIHLLKSEEPDNLPKAGKNINPKD   82 (194)
Q Consensus        18 ~l~v~-Dle~s~~FY~~vLG~~~~~~~~~~~~~----------~----~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~   82 (194)
                      .|... |.+++.+||+++||+++..+....+..          +    +.+...+..+.+....  ...+    ....+.
T Consensus         7 yl~f~g~a~eAl~FY~~~fG~e~~~~~~~~~~~~~~~~~~~~~~~i~ha~l~i~g~~~~~~d~~--~~~~----~~~~~~   80 (137)
T d1u6la_           7 YLIFNGNCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPADWKDKIMHARLVVGSFALMASDNH--PAYP----YEGIKG   80 (137)
T ss_dssp             EEEESSCHHHHHHHHHHHHCSEEEEEEESTTTTC----CCSSCCCEEEEEEEETTEEEEEEECC--TTSC----CCCCCS
T ss_pred             EEEECCCHHHHHHHHHHHCCCEEEEEEEcccCCccccCCCCCCCeEEEEEEEEcCeEEEecccC--Cccc----ccCCCc
Confidence            34455 999999999999999987653211110          1    1122233333332211  1111    233456


Q ss_pred             cEEEEeeCCHH--HHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEec
Q 029385           83 NHISFQCENMA--IVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC  136 (194)
Q Consensus        83 ~hiaf~v~dl~--~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~  136 (194)
                      .++++.+++.+  +.+.++.+.|.++..++.+. .++.+..+++||+|+.|+|...
T Consensus        81 ~~~~l~~~~~d~~~~~~~~l~~G~~v~~p~~~~-~wG~~~g~v~Dp~G~~W~i~~~  135 (137)
T d1u6la_          81 CSISLNVDSKAEAERLFNALAEGGSVQMPLGPT-FWAASFGMFTDRFGVAWMVNCE  135 (137)
T ss_dssp             EEEEEECSSHHHHHHHHHHHHTTSEEEEEEEEE-TTEEEEEEEECTTSCEEEEEES
T ss_pred             EEEEEEcCCHHHHHHHHhhcccCceeecCcccc-CCCcEEEEEECCCCCEEEEEec
Confidence            78899888544  44666667899988877554 3566889999999999999754

>d1sqda2 d.32.1.3 (A:181-410) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.91  E-value=1.2e-09  Score=84.78  Aligned_cols=130  Identities=13%  Similarity=0.151  Sum_probs=81.1

Q ss_pred             CCcccceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEE-------EEe--CCcEEEEeecCCCCCCCCC---
Q 029385            7 NPLCLKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAW-------LFN--YGMGIHLLKSEEPDNLPKA---   74 (194)
Q Consensus         7 ~~~~i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~-------~~~--~g~~~~l~~~~~~~~~~~~---   74 (194)
                      .+..+++|+||++.|+|++++.+||+++||+....+....+....+       +..  ....+.+.+...+.+....   
T Consensus        16 ~~~gl~~IDHI~iaVpdld~a~~~y~~~lG~~~~~~~~~~di~~~~~~l~s~v~~s~~g~v~~~l~E~~~~~~~~sqi~~   95 (230)
T d1sqda2          16 LDYGIRRLDHAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLASNDEMVLLPINEPVHGTKRKSQIQT   95 (230)
T ss_dssp             CCSSEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEC--------CCEEEEEEECTTSCSEEEEEEECCC---CCHHHH
T ss_pred             CCCCcCccCcceecccCHHHHHHHHHHHcCCeeeEEecccccccceeeEeeccccCCCcccceeEEeecCCCCCcchHHH
Confidence            3456899999999999999999999999999888775433221111       111  1245556654332221110   


Q ss_pred             --CCCCCCCccEEEEeeCCHHHHHHHHHhC----CCeEE-ccce-------e-----cCc------cceEEEEEeCCCCC
Q 029385           75 --GKNINPKDNHISFQCENMAIVERRLKEM----KIDYV-KSRV-------E-----EGG------INVDQLFFHDPDGS  129 (194)
Q Consensus        75 --~~~~~~g~~hiaf~v~dl~~~~~~l~~~----Gi~~~-~~~~-------~-----~~g------~~~~~~~~~DPDG~  129 (194)
                        ....++|+.||||.|+||.++.++|+++    |++.. ..+.       .     ...      .....+|-.|.+|.
T Consensus        96 FL~~~~G~GiQHIAf~tdDI~aav~~LrarG~~~G~~f~~~~p~~YY~~l~~r~~~~l~~~~~~~l~~~~IL~D~d~~g~  175 (230)
T d1sqda2          96 YLEHNEGAGLQHLALMSEDIFRTLREMRKRSSIGGFDFMPSPPPTYYQNLKKRVGDVLSDDQIKECEELGILVDRDDQGT  175 (230)
T ss_dssp             HHHHHTSCEEEEEEEEESCHHHHHHHHHHHGGGTSCCBCCCCCHHHHHHHHHHHTTTSCHHHHHHHHHHTCEEEECSSEE
T ss_pred             HHhhccCCceeEEEEEeCCHHHHHHHHHHhhcccCcccccCCchHHHHHHHHHhccccchHhHHHHHHcCCcccCCCCCe
Confidence              0134679999999999999999999986    45443 2221       0     000      01236777788888


Q ss_pred             EEEEEec
Q 029385          130 MIEICNC  136 (194)
Q Consensus       130 ~iEi~~~  136 (194)
                      .+.|++.
T Consensus       176 llqifT~  182 (230)
T d1sqda2         176 LLQIFTK  182 (230)
T ss_dssp             EEEEEBC
T ss_pred             EEEEecc
Confidence            8888865

>d1u7ia_ d.32.1.7 (A:) Hypothetical protein PA1358 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1358
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.43  E-value=1.5e-05  Score=55.83  Aligned_cols=111  Identities=14%  Similarity=0.078  Sum_probs=66.0

Q ss_pred             eEEEEcCCHHHHHHHHHHccCCeEeeeC----CCC-Ccce----EEEEeCCcEEEEeecCCCCCCCCCCCCCCCCccEEE
Q 029385           16 HISLVCRSVEASLDFYQNVLGFFPIRRP----GSF-DFDG----AWLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHIS   86 (194)
Q Consensus        16 hv~l~v~Dle~s~~FY~~vLG~~~~~~~----~~~-~~~~----~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~~hia   86 (194)
                      ++.+.-++.+++.+||+++||...+.+.    ... +..+    +-+...+..+.+.......  +    .......+++
T Consensus         9 yL~f~g~~a~eAi~FY~~~Fg~~~v~~~~~~~~~~~~~~g~v~ha~l~i~~~~i~~~d~~~~~--~----~~~~~~~s~~   82 (134)
T d1u7ia_           9 FLMFQGVQAEAAMNFYLSLFDDAEILQIQRYGAEGPGPEGSVLKALFRLGDQSVHCIDSHVRH--A----FDFTPAFSFF   82 (134)
T ss_dssp             EEEEESSCHHHHHHHHHHHCSSEEEEEEEECCTTCSSCTTSEEEEEEEETTEEEEEEEESSCC--S----CCCCTTEEEE
T ss_pred             EEEECCcCHHHHHHHHHHhCCCeEEEEEEEcCCCCCCCCCCEEEEEEEECCEEEEEecCCCCC--C----CCCCCceEEE
Confidence            4555556899999999999998754432    100 1111    1222344445544332111  1    2223456788


Q ss_pred             EeeCCH---HHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEE
Q 029385           87 FQCENM---AIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEIC  134 (194)
Q Consensus        87 f~v~dl---~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~  134 (194)
                      +.+++.   +++++.| +.|.++..++.+ ..++.+...++||.|+.|.|.
T Consensus        83 l~~~~~d~~~~~~~~l-~~gg~v~~p~~~-~~~g~~~g~v~D~fGv~W~i~  131 (134)
T d1u7ia_          83 VDCESNAQIERLAEAL-SDGGKALMPLGD-YGFSQRFAWLADRFGVSWQLN  131 (134)
T ss_dssp             EECCCHHHHHHHHHHH-HTTSEEEEEEEC-CSSSSEEEEEECTTSCEEEEE
T ss_pred             EEeccHHHHHHHHHHH-hcCCEEecCccc-ccccceEEEEECCCCCEEEEE
Confidence            888854   3445555 556677766533 345568899999999999985

>d1tsja_ d.32.1.7 (A:) Hypothetical protein MW1090 {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein MW1090
species: Staphylococcus aureus [TaxId: 1280]

Probab=98.11  E-value=6.8e-05  Score=52.08  Aligned_cols=108  Identities=9%  Similarity=0.034  Sum_probs=61.5

Q ss_pred             eEEEEcC-CHHHHHHHHHHccCCeEeeeCC----CCC-cce-E---EEEeCCcEEEEeecCCCCCCCCCCCCCCCCccEE
Q 029385           16 HISLVCR-SVEASLDFYQNVLGFFPIRRPG----SFD-FDG-A---WLFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHI   85 (194)
Q Consensus        16 hv~l~v~-Dle~s~~FY~~vLG~~~~~~~~----~~~-~~~-~---~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~~hi   85 (194)
                      ...|.+. |.+++.+||+++||-..+.+..    ..+ .++ .   -+...+..+.+.. ..+ ..        +...++
T Consensus         7 ~Pyl~f~g~a~eAi~FY~~vFg~~~v~~~~~~~~~~~~~~g~i~ha~l~i~g~~~~~~d-~~~-~~--------~~~~s~   76 (129)
T d1tsja_           7 TTFLMFNNQAEEAVKLYTSLFEDSEIITMAKYGENGPGDPGTVQHSIFTLNGQVFMAID-ANS-GT--------ELPISL   76 (129)
T ss_dssp             EEEEECSSCHHHHHHHHHHHSSSCEEEEEEECC-----CTTSEEEEEEEETTEEEEEEC-----------------CCCE
T ss_pred             EEEEEECCCHHHHHHHHHHHcCCcEEEEEEecCCCCCCCCCcEEEEEEEECCEEEEeec-CCC-CC--------CCCEEE
Confidence            4567776 9999999999999764333210    000 011 1   1122333333322 111 11        112357


Q ss_pred             EEeeCCHHH---HHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEe
Q 029385           86 SFQCENMAI---VERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICN  135 (194)
Q Consensus        86 af~v~dl~~---~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~  135 (194)
                      .+.+++.++   ++++|.+.| ++..++... .++.+...+.||.|+.|-|..
T Consensus        77 ~v~~~~~~e~~~~~~~L~~gg-~v~~p~~~~-~~g~~~g~v~D~fGv~W~i~~  127 (129)
T d1tsja_          77 FVTVKDTIEMERLFNGLKDEG-AILMPKTNM-PPYREFAWVQDKFGVSFQLAL  127 (129)
T ss_dssp             EEECSSHHHHHHHHHHHHTTC-EEEEEEEEE-TTEEEEEEEECTTSCEEEEEE
T ss_pred             EeccCCHHHHHHHHHHhccCC-EEecccccc-cccceEEEEECCCCCEEEEeC
Confidence            788886554   566776545 666655333 355688899999999999975

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

Probab=95.31  E-value=0.054  Score=34.74  Aligned_cols=81  Identities=11%  Similarity=0.128  Sum_probs=54.7

Q ss_pred             CCccEEEEeeCCHHHHHHHHHh-CCCeEEccceecCccceEEEEEeCCCCCEEEEEecCCCCcCcCCCcchhhccccccc
Q 029385           80 PKDNHISFQCENMAIVERRLKE-MKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVVPLAGDAVRIRSCTSTV  158 (194)
Q Consensus        80 ~g~~hiaf~v~dl~~~~~~l~~-~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~~~p~~p~~~~~~~~~~~~~~~  158 (194)
                      -++.||.+.|+|+++..+...+ .|.++....   ++   ..+++.++++..+.+......+.....   .+.+.+.++-
T Consensus         2 m~i~Hi~l~v~Dl~~a~~FY~~~lG~~~~~~~---~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~---h~~f~v~~~~   72 (113)
T d1xqaa_           2 MGIKHLNLTVADVVAAREFLEKYFGLTCSGTR---GN---AFAVMRDNDGFILTLMKGKEVQYPKTF---HVGFPQESEE   72 (113)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHHHCCEEEEEE---TT---TEEEEECTTCCEEEEEECSSCCCCTTC---CEEEECSSHH
T ss_pred             CcccEEEEEeCCHHHHHHHHHHhhCCEEEEee---cC---cceeeeecceeeeeeeeeecccccccc---eeeeeecccc
Confidence            3788999999999999998886 799876533   22   456788888999998875443322222   2444453344


Q ss_pred             chhhhhhhhhh
Q 029385          159 NCNFHQQQIQQ  169 (194)
Q Consensus       159 ~~~~~~~~~~~  169 (194)
                      +++.+.++++.
T Consensus        73 ~v~~~~~~l~~   83 (113)
T d1xqaa_          73 QVDKINQRLKE   83 (113)
T ss_dssp             HHHHHHHHHHH
T ss_pred             chhhhhhhHHH
Confidence            56667666653

>d1u69a_ d.32.1.7 (A:) Hypothetical protein PA2721 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA2721
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.25  E-value=0.18  Score=35.22  Aligned_cols=97  Identities=12%  Similarity=0.111  Sum_probs=54.2

Q ss_pred             CCHHHHHHHHHHccCCeEeeeC----CCC-C-cce-EE--EEeCCcEEEEeecCCCCCCCCCCCCCCCCccEEEEeeCC-
Q 029385           22 RSVEASLDFYQNVLGFFPIRRP----GSF-D-FDG-AW--LFNYGMGIHLLKSEEPDNLPKAGKNINPKDNHISFQCEN-   91 (194)
Q Consensus        22 ~Dle~s~~FY~~vLG~~~~~~~----~~~-~-~~~-~~--~~~~g~~~~l~~~~~~~~~~~~~~~~~~g~~hiaf~v~d-   91 (194)
                      .+.+++.+||.++||-..+...    +.. + ..+ ..  .+..+ +..++....+...+      .....++++.++| 
T Consensus        11 Gna~EAl~FY~~vFg~~~i~~~~~~~~~~p~~~~~~Vmha~l~i~-g~~lm~sD~~~~~~------~~~~~sl~l~~d~~   83 (156)
T d1u69a_          11 SAALEAATFYAETFPDSAVLAVHRAPGDYPSGKEGDVLTVEFRVM-GIPCLGLNGGPAFR------HSEAFSFQVATDDQ   83 (156)
T ss_dssp             SCHHHHHHHHHHHSTTEEEEEEEECSSCBTTBCTTSEEEEEEEET-TEEEEEEECCTTCC------CCTTEEEEEEESSH
T ss_pred             CcHHHHHHHHHHHcCCCEEeEEEecCCCCCCCCCCcEEEEEEEEC-CeEEEeecCCCCCC------CCCCeEEEEecCCH
Confidence            5899999999999964322221    100 0 011 11  11222 23333333221111      1234678888884 


Q ss_pred             --HHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEec
Q 029385           92 --MAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC  136 (194)
Q Consensus        92 --l~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~  136 (194)
                        +++++++|.+.|- +..    .-|      ++.|.-|..|.|+..
T Consensus        84 eE~d~~f~~LsegG~-~~~----~~G------~v~DkFGV~Wqi~~~  119 (156)
T d1u69a_          84 AETDRLWNAIVDNGG-EES----ACG------WCRDKWGISWQITPR  119 (156)
T ss_dssp             HHHHHHHHHHHHTTC-EEC----STT------EEECTTSCEEEEEEH
T ss_pred             HHHHHHHHHHhccCC-CCC----CCe------EEECCCCCEEEeChH
Confidence              6777888887762 111    122      699999999999964

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

Probab=94.35  E-value=0.15  Score=34.17  Aligned_cols=87  Identities=15%  Similarity=0.211  Sum_probs=55.3

Q ss_pred             CCccEEEEeeCCHHHHHHHHHhCCCeEEccceec----------CccceEEEEEeCCCC-CEEEEEec---CCC---CcC
Q 029385           80 PKDNHISFQCENMAIVERRLKEMKIDYVKSRVEE----------GGINVDQLFFHDPDG-SMIEICNC---DVL---PVV  142 (194)
Q Consensus        80 ~g~~hiaf~v~dl~~~~~~l~~~Gi~~~~~~~~~----------~g~~~~~~~~~DPDG-~~iEi~~~---~~~---p~~  142 (194)
                      .+++|+++.|.|+++..+..++.|.++.......          .+...+..++..++| ..+++.+.   ...   +..
T Consensus         8 ~ri~Hv~i~v~Dle~s~~FY~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~   87 (149)
T d1ss4a_           8 LRMDNVSIVVESLDNAISFFEEIGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHSRIELSRFLTPPTIADHRTA   87 (149)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHHTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTSSCEEEEEEEEESCCCCBCTTC
T ss_pred             CEEeEEEEEeCCHHHHHHHHHHcCCcEeeeeccceeeeeeeeccCCCceeEEEEeecccceEEEEEeeccccCccccccc
Confidence            4688999999999999999999898876543211          112346777888875 56777653   221   222


Q ss_pred             cCCCcc--hhhcccccccchhhhhhhhhh
Q 029385          143 PLAGDA--VRIRSCTSTVNCNFHQQQIQQ  169 (194)
Q Consensus       143 p~~~~~--~~~~~~~~~~~~~~~~~~~~~  169 (194)
                      +....|  .+...+   -|++...++++.
T Consensus        88 ~~~~~g~~hi~~~v---~d~~~~~~~l~~  113 (149)
T d1ss4a_          88 PVNALGYLRVMFTV---EDIDEMVSRLTK  113 (149)
T ss_dssp             CSSSBEEEEEEEEE---SCHHHHHHHHHH
T ss_pred             CCCCcceeEEEEee---chhHHHHHHHHH
Confidence            222222  344556   578888877764

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=93.52  E-value=0.36  Score=32.10  Aligned_cols=90  Identities=14%  Similarity=0.168  Sum_probs=54.3

Q ss_pred             CCccEEEEeeCCHHHHHHHHHh-CCCeEEccceecCccceEEEEEeCCC---CCEEEEEecCCCCcCcCC--Ccchhhcc
Q 029385           80 PKDNHISFQCENMAIVERRLKE-MKIDYVKSRVEEGGINVDQLFFHDPD---GSMIEICNCDVLPVVPLA--GDAVRIRS  153 (194)
Q Consensus        80 ~g~~hiaf~v~dl~~~~~~l~~-~Gi~~~~~~~~~~g~~~~~~~~~DPD---G~~iEi~~~~~~p~~p~~--~~~~~~~~  153 (194)
                      .|++||++.|.|+++..+-..+ .|.++..............+++.+..   +..+++...+........  ....+.+.
T Consensus         5 ~gl~Hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Hiaf~   84 (144)
T d1zswa1           5 KGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFEIPLVGRTYRGTNAITRIGLL   84 (144)
T ss_dssp             CSEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEETTEEEEEEEEEESTTCCTTSEEEEEECTTCCBCBCCBSEEEEEEEE
T ss_pred             cceeeEEEEeCCHHHHHHHHHHHhCCeeEeeeccccCCceeEEEecccccceeeEEeecccccccCCccCCCceeEEEEe
Confidence            4889999999999999999986 79988765433333334556666654   455555554332221111  12345566


Q ss_pred             cccccchhhhhhhhhh
Q 029385          154 CTSTVNCNFHQQQIQQ  169 (194)
Q Consensus       154 ~~~~~~~~~~~~~~~~  169 (194)
                      +.+.-++....+++..
T Consensus        85 v~~~~~l~~~~~~l~~  100 (144)
T d1zswa1          85 VPSEDSLHYWKERFEK  100 (144)
T ss_dssp             ESCHHHHHHHHHHHHH
T ss_pred             cCCchhHHHHhhhhhc
Confidence            6443345556666553

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.83  E-value=0.21  Score=33.82  Aligned_cols=87  Identities=11%  Similarity=0.048  Sum_probs=50.3

Q ss_pred             CCccEEEEeeCCHHHHHHHHH-hCCCeEEccceecCccceEEEEEeCCCCCEEEEEecCCCCcCcC------CCcc--hh
Q 029385           80 PKDNHISFQCENMAIVERRLK-EMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVVPL------AGDA--VR  150 (194)
Q Consensus        80 ~g~~hiaf~v~dl~~~~~~l~-~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~~~p~~p~------~~~~--~~  150 (194)
                      .+++||+|.|.|++++.+... ..|.+.........+......+...-++..+++.+....+..+.      ++.|  .+
T Consensus        10 ~~~dHi~i~V~Dl~~a~~fY~~~lGf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~G~~hi   89 (149)
T d1sqia1          10 LHFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQGKIVFVLCSALNPWNKEMGDHLVKHGDGVKDI   89 (149)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEEESSTTCHHHHHHHHHHCSEEEEE
T ss_pred             eeEeEEEEEcCCHHHHHHHHhhccceEEEEEecccCCceEEEEEEecCCcEEEEEEeccCCCCchhhhhhhhCCCeEEEE
Confidence            467899999999999999886 57998765432222221133333333555666665432222111      1122  34


Q ss_pred             hcccccccchhhhhhhhhh
Q 029385          151 IRSCTSTVNCNFHQQQIQQ  169 (194)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~  169 (194)
                      .+.+   -|+++..+++..
T Consensus        90 af~V---~di~~~~~~l~~  105 (149)
T d1sqia1          90 AFEV---EDCEHIVQKARE  105 (149)
T ss_dssp             EEEE---ECHHHHHHHHHH
T ss_pred             EEEe---ccHHHHHHHHHH
Confidence            4555   577777777663

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=89.65  E-value=0.34  Score=33.23  Aligned_cols=86  Identities=8%  Similarity=0.028  Sum_probs=52.8

Q ss_pred             CCccEEEEeeCCHHHHHHHHHh-CCCeEEccce-ecCccceEEEEEeCCCCCEEEEEecCCCCc------Cc---CCCcc
Q 029385           80 PKDNHISFQCENMAIVERRLKE-MKIDYVKSRV-EEGGINVDQLFFHDPDGSMIEICNCDVLPV------VP---LAGDA  148 (194)
Q Consensus        80 ~g~~hiaf~v~dl~~~~~~l~~-~Gi~~~~~~~-~~~g~~~~~~~~~DPDG~~iEi~~~~~~p~------~p---~~~~~  148 (194)
                      .++.||+|.|.|++++.+..++ .|.+...... +..... ...++....+..+++.+......      .+   ....|
T Consensus         6 ~~idHv~i~V~D~~~a~~fY~~~lGf~~v~~~~~~~~~~~-~~~~~l~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~g~G   84 (163)
T d1t47a1           6 KGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRE-TASYVLTNGSARFVLTSVIKPATPWGHFLADHVAEHGDG   84 (163)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCS-EEEEEEEETTEEEEEEEESSCCSHHHHHHHHHHHHHCSE
T ss_pred             ceEeEEEEEeCCHHHHHHHHHHHhCCeEEeeeccccccee-EEEEEEecCCEEEEEeccCCCCCccccccchhhhcCCCc
Confidence            4789999999999999999985 7998765332 222222 34444444566677776432111      01   01123


Q ss_pred             --hhhcccccccchhhhhhhhhh
Q 029385          149 --VRIRSCTSTVNCNFHQQQIQQ  169 (194)
Q Consensus       149 --~~~~~~~~~~~~~~~~~~~~~  169 (194)
                        .+.+.+   -|+++..+++..
T Consensus        85 ~~hiaf~V---dDid~a~~~l~~  104 (163)
T d1t47a1          85 VVDLAIEV---PDARAAHAYAIE  104 (163)
T ss_dssp             EEEEEEEC---SCHHHHHHHHHH
T ss_pred             eEEEEEee---CCHHHHHHHHHH
Confidence              344445   788888888764

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

Probab=89.20  E-value=0.53  Score=30.54  Aligned_cols=84  Identities=12%  Similarity=0.073  Sum_probs=52.5

Q ss_pred             CccEEEEeeCCHHHHHHHHHh-CCCeEEccceecCccceEEEEEeCCCCCEEEEEecCCCCcCcCCCcchhhcccccccc
Q 029385           81 KDNHISFQCENMAIVERRLKE-MKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVVPLAGDAVRIRSCTSTVN  159 (194)
Q Consensus        81 g~~hiaf~v~dl~~~~~~l~~-~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~~~~p~~p~~~~~~~~~~~~~~~~  159 (194)
                      +++|+++.|.|+++..+...+ .|.++...............++ ...+..+++....+.+....   +.+.... +.-|
T Consensus         4 ~i~Hi~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~---~~~~f~v-~~~d   78 (130)
T d1r9ca_           4 GLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFF-LIGDIWVAIMQGEKLAERSY---NHIAFKI-DDAD   78 (130)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHHHCCEEEEEGGGSTTCCSCEEEE-EETTEEEEEEECCCCSSCCS---CEEEEEC-CGGG
T ss_pred             cEeEEEEEeCCHHHHHHHHHHhcCCEEEEEcCCccccceeEEEE-ecCCEEEeecccccccccce---eeeeecc-cHHH
Confidence            688999999999999998884 6888775443222222223333 34567777776554333333   3344545 4467


Q ss_pred             hhhhhhhhhh
Q 029385          160 CNFHQQQIQQ  169 (194)
Q Consensus       160 ~~~~~~~~~~  169 (194)
                      ++.+.++++.
T Consensus        79 v~~~~~~l~~   88 (130)
T d1r9ca_          79 FDRYAERVGK   88 (130)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            8888888764

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

Probab=88.95  E-value=0.5  Score=31.20  Aligned_cols=29  Identities=10%  Similarity=0.163  Sum_probs=25.3

Q ss_pred             CCccEEEEeeCCHHHHHHHHHh-CCCeEEc
Q 029385           80 PKDNHISFQCENMAIVERRLKE-MKIDYVK  108 (194)
Q Consensus        80 ~g~~hiaf~v~dl~~~~~~l~~-~Gi~~~~  108 (194)
                      .+++||++.|.|+++..+-.++ .|.++..
T Consensus         3 ~~l~Hi~l~v~d~~~~~~FY~~vLG~~~~~   32 (140)
T d1npba_           3 QSLNHLTLAVSDLQKSVTFWHELLGLTLHA   32 (140)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHTTSCCEEEE
T ss_pred             CcEeEEEEEeCCHHHHHHHHHHHhCCEEEE
Confidence            3689999999999999999986 7998765

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=88.76  E-value=0.53  Score=32.31  Aligned_cols=54  Identities=13%  Similarity=0.180  Sum_probs=38.4

Q ss_pred             eeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcc--eEEEEeCC-cEEEEeecCC
Q 029385           13 SLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFD--GAWLFNYG-MGIHLLKSEE   67 (194)
Q Consensus        13 ~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~--~~~~~~~g-~~~~l~~~~~   67 (194)
                      ++.||+|.|.|++++.+...+ .|.+.+.++...+..  .+++..+| ..+.+++...
T Consensus       104 G~~Hiaf~VdDi~aa~~~l~~-~G~~~~~~P~~~~~~~~~a~I~~~gd~~~~~v~r~~  160 (167)
T d1sqda1         104 GVRAVAIEVEDAESAFSISVA-NGAIPSSPPIVLNEAVTIAEVKLYGDVVLRYVSYKA  160 (167)
T ss_dssp             EEEEEEEEESCHHHHHHHHHH-TTCCEEEEEEEETTTEEEEEEEEETTEEEEEEEECC
T ss_pred             CceEEEEEeCCHHHHHHHHHH-CCCEEecCCeecCCCEEEEEEEccCCcEEEEEecCC
Confidence            789999999999999999988 899988876433211  13334444 4555777653

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

Probab=88.11  E-value=0.83  Score=29.96  Aligned_cols=76  Identities=12%  Similarity=0.101  Sum_probs=48.9

Q ss_pred             CccEEEEeeCCHHHHHHHHHh-CCCeEEccceecCccceEEEEEe-CCCCCEEEEEecCCCCcCcCCCcchhhccccccc
Q 029385           81 KDNHISFQCENMAIVERRLKE-MKIDYVKSRVEEGGINVDQLFFH-DPDGSMIEICNCDVLPVVPLAGDAVRIRSCTSTV  158 (194)
Q Consensus        81 g~~hiaf~v~dl~~~~~~l~~-~Gi~~~~~~~~~~g~~~~~~~~~-DPDG~~iEi~~~~~~p~~p~~~~~~~~~~~~~~~  158 (194)
                      ++.||+|.|.|++++.+..++ .|.++....   +    ..++|+ |-..+.+.+...+. +     ....+.+.+.+.-
T Consensus         4 ~l~hv~i~V~Dl~~s~~FY~~vLG~~~~~~~---~----~~~~l~~~~~~~~l~l~~~~~-~-----~~~h~~f~v~~~~   70 (131)
T d1lgta1           4 SLGYMGFAVSDVAAWRSFLTQKLGLMEAGTT---D----NGDLFRIDSRAWRIAVQQGEV-D-----DLAFAGYEVADAA   70 (131)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCCEEEEEE---T----TEEEEESSSBSCSEEEEECTT-C-----EEEEEEEEESSHH
T ss_pred             cccEEEEEeCCHHHHHHHHHHhhCCceeecC---C----cceEEeecCCceEEEEecCCC-C-----CceEEEEEEccHH
Confidence            578999999999999999998 599877532   2    234454 44455677765422 1     1223445564445


Q ss_pred             chhhhhhhhhh
Q 029385          159 NCNFHQQQIQQ  169 (194)
Q Consensus       159 ~~~~~~~~~~~  169 (194)
                      +++...+++.+
T Consensus        71 dl~~~~~~l~~   81 (131)
T d1lgta1          71 GLAQMADKLKQ   81 (131)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            66667777664

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

Probab=87.28  E-value=0.63  Score=30.47  Aligned_cols=54  Identities=15%  Similarity=0.180  Sum_probs=36.2

Q ss_pred             cceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcce--EEEEe----CCcEEEEeec
Q 029385           11 LKSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDG--AWLFN----YGMGIHLLKS   65 (194)
Q Consensus        11 i~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~--~~~~~----~g~~~~l~~~   65 (194)
                      -.+++|+++.|.|++++.+-.++ .|.+++.........+  .+++.    .|.-++|++.
T Consensus        84 ~~g~~Hia~~v~di~~~~~~l~~-~Gv~~~~~~~~~~~~g~~~~f~~p~dp~G~~iEl~e~  143 (145)
T d1jc4a_          84 RAGLHHMAWRVDDIDAVSATLRE-RGVQLLYDEPKLGTGGNRINFMHPKSGKGVLIELTQY  143 (145)
T ss_dssp             CCEEEEEEEECSCHHHHHHHHHH-HTCCBSCSSCEECSSSCEEEEBCGGGGTTSCEEEEEC
T ss_pred             CCcceEEEEecchHHHHHHHHHH-CCCEEeCCCceECCCCCEEEEEeccCCCCeEEEEEEC
Confidence            45799999999999999999988 7998765432111112  22221    4566777765

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=86.56  E-value=1.2  Score=30.93  Aligned_cols=57  Identities=5%  Similarity=0.067  Sum_probs=37.5

Q ss_pred             CCccEEEEeeCCHHHHHHHHHhCCCeEEccceecCccceEEEEEeCCCCCEEEEEec
Q 029385           80 PKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC  136 (194)
Q Consensus        80 ~g~~hiaf~v~dl~~~~~~l~~~Gi~~~~~~~~~~g~~~~~~~~~DPDG~~iEi~~~  136 (194)
                      .++.||++.|.|+++..+..+..|.++........+...-.+.-.+...+.+.+...
T Consensus         4 ~rl~Hv~l~v~Dle~s~~FYe~LGf~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~   60 (176)
T d1f1ua2           4 VRLDHFNQVTPDVPRGRAYLEDLGFRVSEDIKDSDGVTYAAWMHRKQTVHDTALTGG   60 (176)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHHTTCEEEEEEECTTCCEEEEEEESSSSSCSEEEEES
T ss_pred             eEeeeEEEEcCCHHHHHHHHHHCCCEEEEEEecCCcceeeeeeccCccccceecccc
Confidence            367899999999999999888899988754333233221222333455666666554

>d1zswa2 d.32.1.10 (A:145-314) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=85.70  E-value=1.1  Score=30.99  Aligned_cols=84  Identities=12%  Similarity=0.079  Sum_probs=48.5

Q ss_pred             CCccEEEEeeCCHHHHHHHHHh-CCCeEEccceecCccceEEEEEeCCC--CCEEEEEecCCCCcCcCCC-cchhhcccc
Q 029385           80 PKDNHISFQCENMAIVERRLKE-MKIDYVKSRVEEGGINVDQLFFHDPD--GSMIEICNCDVLPVVPLAG-DAVRIRSCT  155 (194)
Q Consensus        80 ~g~~hiaf~v~dl~~~~~~l~~-~Gi~~~~~~~~~~g~~~~~~~~~DPD--G~~iEi~~~~~~p~~p~~~-~~~~~~~~~  155 (194)
                      .|++||++.|.|+++..+...+ .|.++....   ++   ...|....+  +..+.+......+..|-.. -..+.....
T Consensus        11 ~Gl~HV~L~V~Dle~s~~FY~~vLG~~~~~~~---~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~HiAf~V~   84 (170)
T d1zswa2          11 QGMGSVELTVRRLDKMASTLTEIFGYTEVSRN---DQ---EAIFQSIKGEAFGEIVVKYLDGPTEKPGRGSIHHLAIRVK   84 (170)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHHTTCCEEEEEC---SS---EEEEESSTTCSTTCEEEEECCSSBCBCCBTCEEEEEEEES
T ss_pred             CCeeeEEEEeCCHHHHHHHHHHHhCCEEEeec---Cc---eEEEEeccCccceEEEeccccccccccCccccceEEEEeC
Confidence            4789999999999999999997 699877643   22   333433322  3333333322222222111 123556664


Q ss_pred             cccchhhhhhhhhh
Q 029385          156 STVNCNFHQQQIQQ  169 (194)
Q Consensus       156 ~~~~~~~~~~~~~~  169 (194)
                      ++-++..+.+++..
T Consensus        85 ~~~~l~~~~~~l~~   98 (170)
T d1zswa2          85 NDAELAYWEEQVKQ   98 (170)
T ss_dssp             SHHHHHHHHHHHHH
T ss_pred             ChHHHHHHHHHHHh
Confidence            55556677777653

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

Probab=84.73  E-value=2.6  Score=26.53  Aligned_cols=31  Identities=3%  Similarity=0.083  Sum_probs=26.0

Q ss_pred             CccEEEEeeCCHHHHHHHHHh-CCCeEEccce
Q 029385           81 KDNHISFQCENMAIVERRLKE-MKIDYVKSRV  111 (194)
Q Consensus        81 g~~hiaf~v~dl~~~~~~l~~-~Gi~~~~~~~  111 (194)
                      ++.|+++.|.|+++..+..++ .|.++.....
T Consensus         2 kl~Hv~i~V~Dl~~s~~FY~~iLG~~~~~~~~   33 (135)
T d1f9za_           2 RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSE   33 (135)
T ss_dssp             CEEEEEEECSCHHHHHHHHHHTTCCEEEEEEE
T ss_pred             cceEEEEEcCCHHHHHHHHHHHhCCEEEeecc
Confidence            467999999999999998886 6999876543

>d1k4na_ d.32.1.5 (A:) Hypothetical protein YecM (EC4020) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YecM (EC4020)
domain: Hypothetical protein YecM (EC4020)
species: Escherichia coli [TaxId: 562]

Probab=83.16  E-value=4.1  Score=28.86  Aligned_cols=75  Identities=12%  Similarity=0.038  Sum_probs=50.1

Q ss_pred             ceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCCCCcceEEE-------EeCCcEEEEeecCCCCCCCCCCCCCCCCccE
Q 029385           12 KSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGSFDFDGAWL-------FNYGMGIHLLKSEEPDNLPKAGKNINPKDNH   84 (194)
Q Consensus        12 ~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~-------~~~g~~~~l~~~~~~~~~~~~~~~~~~g~~h   84 (194)
                      -.++|+++.|++.+.+.+|-+..+-.-..-....-.+....+       ...+..+..++.+.|....    ....|.-|
T Consensus        42 ~~~DHialR~n~~~~A~~w~~~l~~~G~llSen~INGRPI~l~~L~~Pl~~~~~~I~ciELP~P~~k~----Yp~eGWEH  117 (190)
T d1k4na_          42 LTADHISLRCHQNATAERWRRGFEQCGELLSENMINGRPICLFKLHEPVQVAHWQFSIVELPWPGEKR----YPHEGWEH  117 (190)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHHTTTEEEEEEEEETTEEEEEEEEEEEEEETTEEEEEEEEECCCSSC----CSSCEEEE
T ss_pred             ccCcEEEEeeCCHHHHHHHHHHHHHhchhhhcCeeCCeeEEEEEcCCCceeCCcEEEEEEeCCCCCCC----CCCCCceE
Confidence            357999999999999999999988764433221111111222       2234567888887665422    44679999


Q ss_pred             EEEeeC
Q 029385           85 ISFQCE   90 (194)
Q Consensus        85 iaf~v~   90 (194)
                      |-+.++
T Consensus       118 IElVlp  123 (190)
T d1k4na_         118 IEIVLP  123 (190)
T ss_dssp             EEEECC
T ss_pred             EEEEec
Confidence            999998

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=80.97  E-value=1.5  Score=30.24  Aligned_cols=30  Identities=13%  Similarity=0.201  Sum_probs=25.8

Q ss_pred             CCccEEEEeeCCHHHHHHHHHh-CCCeEEcc
Q 029385           80 PKDNHISFQCENMAIVERRLKE-MKIDYVKS  109 (194)
Q Consensus        80 ~g~~hiaf~v~dl~~~~~~l~~-~Gi~~~~~  109 (194)
                      .+++||+|.|.|++++.+...+ .|.+....
T Consensus        12 ~~~~Hi~i~V~D~e~a~~FY~~~LGf~~v~~   42 (172)
T d1sp8a1          12 LAFHHVELWCADAASAAGRFSFGLGAPLAAR   42 (172)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHHHTCCEEEE
T ss_pred             CEEEEEEEEeCCHHHHHHHHHHhhCceEEEE
Confidence            4789999999999999999985 79887653

>d1cjxa1 d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=80.74  E-value=2.1  Score=29.00  Aligned_cols=53  Identities=13%  Similarity=0.194  Sum_probs=36.8

Q ss_pred             ceeeeEEEEcCCHHHHHHHHHHccCCeEeeeCCC-CCcceEEEEeCC-cEEEEeec
Q 029385           12 KSLNHISLVCRSVEASLDFYQNVLGFFPIRRPGS-FDFDGAWLFNYG-MGIHLLKS   65 (194)
Q Consensus        12 ~~i~hv~l~v~Dle~s~~FY~~vLG~~~~~~~~~-~~~~~~~~~~~g-~~~~l~~~   65 (194)
                      .+++||+|.|.|++++.+.... +|.+++.++.. .+.....+.+.| .-+.++..
T Consensus        72 ~gv~hiaf~V~D~~~a~~~a~~-~Ga~~i~~~~~~g~~~~~~i~g~gg~~i~Fv~~  126 (150)
T d1cjxa1          72 PSVCGMAFRVKDSQKAYNRALE-LGAQPIHIDTGPMELNLPAIKGIGGAPLYLIDR  126 (150)
T ss_dssp             SEEEEEEEEESCHHHHHHHHHH-TTCCBCCCCCCTTCBCCCEEECGGGCEEEEECC
T ss_pred             CceEEEEEEeCCHHHHHHHHHH-CCCEEcccCCCCCceeeeEEEcCCCCEEEEECc
Confidence            4789999999999999999987 99998876532 222333444544 34455544