Citrus Sinensis ID: 029433

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190---
Protein Sequence
MKIKLAAHFLLLLAFSAFMLSEAETQLKPHAIESFTVNYIQFGNCTYLVVIKTSCDSKNFTRDRISIAFGDAYGNQIYAPRLDDPFTKTFQSCSSDGFQIDGPCATDICYVYLHRSGLDGWEPESVKIISPNSSPVTYDFNTSAPNEDWYGVNLCQIHPPPSPFEPSPPFPLNLRLLLHLLLISIAFPDCSGS
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccEEEEEEEEccccccccccEEEEEEEEccccEEEEEcccccccccccccccccEEEEcccccccEEEEEEEEcccccEEcEEEEEccccccEEEEEccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHHHccccccccccccHcccHHHHHccccEEEEEEEEccccccccccEEEEEEEcccccEEEEcccccccccccccccccEEEEEccccccEEEEEEEEEccccccccEEEEEccccccEEEEEccccccccEEcccccccccccccccccccHHHHHHHHHHHHHHHHcccccccc
Coil and Loop (DISEMBL)
MKIKLAAHFLLLLAFSAFMLSEAetqlkphaiesftvnyiqfgNCTYLVVIKTscdsknftrdRISIAFgdaygnqiyaprlddpftktfqscssdgfqidgpcatdiCYVYLhrsgldgwepesvkiispnsspvtydfntsapnedwygvnlcqihpppspfepsppfplNLRLLLHLLLISIafpdcsgs
Flexible Loop (DISEMBL)
MKIKLAAHFLLLLAFSAFMLSEAETQLKPHAIESFTVNYIQFGNCTYLVVIKTSCDSKNFTRDRISIAFGDAYGNQIYAPRLDDPFTKTFQSCSSDGFQIDGPCATDICYVYLHRSGLDGWEPESVKIISPNSSPVTYDFNTSAPNEDWYGVNLCQIHPPPSPFEPSPPFPLNLRLLLHLLLISIAFPDCSGS
Low Complexity Region (SEG)
MKIKlaahfllllafsafmlSEAETQLKPHAIESFTVNYIQFGNCTYLVVIKTSCDSKNFTRDRISIAFGDAYGNQIYAPRLDDPFTKTFQSCSSDGFQIDGPCATDICYVYLHRSGLDGWEPESVKIISPNSSPVTYDFNTSAPNEDWYGVNLCQIHpppspfepsppfplnlrlllhlllISIAFPDCSGS
Disordered region (IsUnstruct)
***KLAAHFLLLLAFSAFMLSEAETQLKPHAIESFTVNYIQFGNCTYLVVIKTSCDSKNFTRDRISIAFGDAYGNQIYAPRLDDPFTKTFQSCSSDGFQIDGPCATDICYVYLHRSGLDGWEPESVKIISPN*SPVTYDFNTSAPNEDWYGVNLCQIH***********FPLNLRLLLHLLLISIAFPD****
Disordered Region (DISOPRED)
***KLAAHFLLLLAFSAFMLS********************FGNCTYLVVIKTSCDSKNFTRDRISIAFGDAYGNQIYAPRLDDPFTKTFQSCSSDGFQIDGPCATDICYVYLHRSGLDGWEPESVKIISPNSSPVTYDFNTSAPNEDWYGVNLC****************LNLRLLLHLLLISIAFPDCS**
Disordered Region (DISEMBL)
MKIKLAAHFLLLLAFSAFMLSEAETQLKPHAIESFTVNYIQFGNCTYLVVIKTSCDSKNFTRDRISIAFGDAYGNQIYAPRLDDPFTKTFQSCSSDGFQIDGPCATDICYVYLHRSGLDGWEPESVKIISPNSSPVTYDFNTSAPNEDWYGVNLCQIHPPPSPFEPSPPFPLNLRLLLHLLLISIAFPDCSGS
Disordered Region (DISPRO)
MKIKLAAHFLLLLAFSAFMLSEAETQLKPHAIESFTVNYIQFGNCTYLVVIKTSCDSKNFTRDRISIAFGDAYGNQIYAPRLDDPFTKTFQSCSSDGFQIDGPCATDICYVYLHRSGLDGWEPESVKIISPNSSPVTYDFNTSAPNEDWYGVNLCQIHPPPSPFEPSPPFPLNLRLLLHLLLISIAFPDC***
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MKIKLAAHFLLLLAFSAFMLSEAETQLKPHAIESFTVNYIQFGNCTYLVVIKTSCDSKNFTRDRISIAFGDAYGNQIYAPRLDDPFTKTFQSCSSDGFQIDGPCATDICYVYLHRSGLDGWEPESVKIISPNSSPVTYDFNTSAPNEDWYGVNLCQIHPPPSPFEPSPPFPLNLRLLLHLLLISIAFPDCSGS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	193
351721024	189	uncharacterized protein LOC100499779 pre	0.896	0.915	0.576	4e-49
351727573	188	uncharacterized protein LOC100499692 pre	0.787	0.808	0.641	9e-49
351725853	187	uncharacterized protein LOC100305526 pre	0.875	0.903	0.548	2e-47
356559905	188	PREDICTED: uncharacterized protein LOC10	0.782	0.803	0.611	3e-47
388514213	191	unknown [Lotus japonicus]	0.797	0.806	0.580	2e-45
388519799	189	unknown [Medicago truncatula]	0.829	0.846	0.572	3e-44
388504722	189	unknown [Medicago truncatula]	0.704	0.719	0.633	3e-44
388504914	194	unknown [Medicago truncatula]	0.829	0.824	0.547	6e-44
297797187	188	hypothetical protein ARALYDRAFT_496397 [	0.891	0.914	0.516	6e-44
388491126	194	unknown [Medicago truncatula]	0.829	0.824	0.547	6e-44

>gi|351721024|ref|NP_001235916.1| uncharacterized protein LOC100499779 precursor [Glycine max] gi|255626469|gb|ACU13579.1| unknown [Glycine max]

 Score =  199 bits (507), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 106/184 (57%), Positives = 125/184 (67%), Gaps = 11/184 (5%)

Query: 10  LLLLAF-SAFMLSEAETQ---LKPHAIESFTVNYIQF---GNCTYLVVIKTSCDSKNFTR 62
           L L  F SA  LS +E++   ++PHA ESF+V YIQ     NC+YLVVI TSC S  FT 
Sbjct: 6   LFLFCFASALTLSVSESKSASVQPHAAESFSVGYIQMKTAANCSYLVVISTSCSSPKFTT 65

Query: 63  DRISIAFGDAYGNQIYAPRLDDPFTKTFQSCSSDGFQIDGPCATDICYVYLHRSGL-DGW 121
           D+I I FGDAYGNQ+Y PRLDDP ++TF+ CSSD FQIDG CA+ ICYVYL+RSG  +GW
Sbjct: 66  DKIGITFGDAYGNQVYEPRLDDPISRTFEQCSSDTFQIDGACASPICYVYLYRSGAEEGW 125

Query: 122 EPESVKIISPNSSPVTYDFNTSAPNEDWYGVNLCQIHPPPSPFEPSPP---FPLNLRLLL 178
           EPESVKI   NS PVT+DFNTS PN  WYG NLC+  P  S  +  P      L L  +L
Sbjct: 126 EPESVKIYGYNSEPVTFDFNTSIPNGTWYGYNLCETPPSSSSHQLFPQKWLMSLVLGFVL 185

Query: 179 HLLL 182
             LL
Sbjct: 186 SFLL 189

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351727573|ref|NP_001238445.1| uncharacterized protein LOC100499692 precursor [Glycine max] gi|255625831|gb|ACU13260.1| unknown [Glycine max]

 Score =  198 bits (504), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 102/159 (64%), Positives = 116/159 (72%), Gaps = 7/159 (4%)

Query: 3   IKLAAHFLLLLAFSAFMLSEAETQ---LKPHAIESFTVNYIQF---GNCTYLVVIKTSCD 56
           IK     LL LA S   LS +ET+   L PHA ESF V+YIQ    G C+YLVVI TSC 
Sbjct: 2   IKQVLLVLLFLA-SGLTLSVSETESVSLLPHAAESFNVSYIQMKNAGTCSYLVVISTSCS 60

Query: 57  SKNFTRDRISIAFGDAYGNQIYAPRLDDPFTKTFQSCSSDGFQIDGPCATDICYVYLHRS 116
           S  +TRD+ISI+FGDAYGNQIYAPRLDDP + TF+SCSSD FQI GPCA  ICYVYL+RS
Sbjct: 61  SPRYTRDQISISFGDAYGNQIYAPRLDDPASGTFESCSSDTFQITGPCAYQICYVYLYRS 120

Query: 117 GLDGWEPESVKIISPNSSPVTYDFNTSAPNEDWYGVNLC 155
           GLDGW+PESVKI S N   VT+ +NT  P + WYG NLC
Sbjct: 121 GLDGWKPESVKINSYNGRAVTFYYNTYIPRDTWYGFNLC 159

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351725853|ref|NP_001236595.1| uncharacterized protein LOC100305526 precursor [Glycine max] gi|255625801|gb|ACU13245.1| unknown [Glycine max]

 Score =  194 bits (492), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 101/184 (54%), Positives = 128/184 (69%), Gaps = 15/184 (8%)

Query: 10  LLLLAFSAFM-LSEAETQ---LKPHAIESFTVNYIQF---GNCTYLVVIKTSCDSKNFTR 62
           L L  F++ + LS +E++   ++PHA ESF+V YIQ     NC+YLVVI TSC S  FT 
Sbjct: 6   LFLFCFASVLTLSVSESKSASVQPHAAESFSVGYIQMKTAANCSYLVVISTSCSSPKFTT 65

Query: 63  DRISIAFGDAYGNQIYAPRLDDPFTKTFQSCSSDGFQIDGPCATDICYVYLHRSGL-DGW 121
           D+I I FGDA GNQ+Y PRLDDP ++TF+ CSSD FQIDG CA+ ICYVYL+RSG  +GW
Sbjct: 66  DKIGITFGDANGNQVYEPRLDDPISRTFEQCSSDTFQIDGACASPICYVYLYRSGAEEGW 125

Query: 122 EPESVKIISPNSSPVTYDFNTSAPNEDWYGVNLCQIHPPPSPFEPSPPFPLNLRLLLHLL 181
           EPESVKI   NS P+T+DFNTS PN  WYG NLC+   P S ++ SP      +  + L+
Sbjct: 126 EPESVKIYGYNSEPITFDFNTSIPNGTWYGYNLCET--PSSSYQLSPQ-----KWFMSLV 178

Query: 182 LISI 185
           L S+
Sbjct: 179 LGSV 182

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356559905|ref|XP_003548236.1| PREDICTED: uncharacterized protein LOC100781972 [Glycine max]

 Score =  193 bits (490), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 99/162 (61%), Positives = 116/162 (71%), Gaps = 11/162 (6%)

Query: 3   IKLAAHFLLLLAF-SAFMLSEAETQ---LKPHAIESFTVNYIQF---GNCTYLVVIKTSC 55
           IKL    L L  F SA  LS +E++   + PHA ESF+V YIQ     NC+YLVVI TSC
Sbjct: 2   IKLV---LFLFCFASALTLSVSESKSASVHPHAAESFSVEYIQMKTAANCSYLVVISTSC 58

Query: 56  DSKNFTRDRISIAFGDAYGNQIYAPRLDDPFTKTFQSCSSDGFQIDGPCATDICYVYLHR 115
            S  FT D+I I FGD+YGNQ+Y PRLDDP ++TF+ CSSD FQIDG CA+ ICYVYL+R
Sbjct: 59  SSPKFTADKIGITFGDSYGNQVYEPRLDDPISRTFEQCSSDTFQIDGACASPICYVYLYR 118

Query: 116 SGL-DGWEPESVKIISPNSSPVTYDFNTSAPNEDWYGVNLCQ 156
           SG  +GWEPESVKI   NS P T+DFNTS PN  WYG NLC+
Sbjct: 119 SGAEEGWEPESVKIYGYNSEPTTFDFNTSIPNGTWYGYNLCE 160

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388514213|gb|AFK45168.1| unknown [Lotus japonicus]

 Score =  187 bits (475), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 94/162 (58%), Positives = 113/162 (69%), Gaps = 8/162 (4%)

Query: 9   FLLLLAFSAFMLSEAETQ----LKPHAIESFTVNYIQFG---NCTYLVVIKTSCDSKNFT 61
           FLL    S   LS +E++    L+PH  E F V YIQ     NC+YLV+I TSC S  FT
Sbjct: 6   FLLFCFVSGLTLSVSESKSASMLQPHVAEDFDVGYIQMKSEHNCSYLVMITTSCSSPKFT 65

Query: 62  RDRISIAFGDAYGNQIYAPRLDDPFTKTFQSCSSDGFQIDGPCATDICYVYLHRSGLD-G 120
            D+ISIAFGD  GNQ+YAPRLDDP +KTF+ CSSD FQIDG CA+ ICYVYL+RSG + G
Sbjct: 66  TDKISIAFGDDQGNQVYAPRLDDPISKTFEQCSSDSFQIDGACASPICYVYLYRSGSENG 125

Query: 121 WEPESVKIISPNSSPVTYDFNTSAPNEDWYGVNLCQIHPPPS 162
           W+PESVKI   ++ P T+ FNT  PN+ WYG NLC+   PPS
Sbjct: 126 WKPESVKIFGFDAEPTTFKFNTPIPNDTWYGYNLCETPSPPS 167

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388519799|gb|AFK47961.1| unknown [Medicago truncatula]

 Score =  183 bits (465), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 95/166 (57%), Positives = 118/166 (71%), Gaps = 6/166 (3%)

Query: 20  LSEAET-QLKPHAIESFTVNYIQF---GNCTYLVVIKTSCDSKNFTRDRISIAFGDAYGN 75
           +SE+++  L PHA ESF ++YIQ    G+C+Y VVI TSC S  +T D+ISIAFGDAYGN
Sbjct: 22  VSESQSVSLLPHANESFNISYIQMKNAGSCSYFVVISTSCSSPRYTSDQISIAFGDAYGN 81

Query: 76  QIYAPRLDDPFTKTFQSCSSDGFQIDGPCATDICYVYLHRSGLDGWEPESVKIISPNSSP 135
           QIYAPRLDDP + TF+SCSSD FQI+GPCA  ICYVYL+RSG  GW+PESVKI   N  P
Sbjct: 82  QIYAPRLDDPSSGTFESCSSDTFQINGPCAYQICYVYLYRSGSSGWKPESVKINGYNGEP 141

Query: 136 VTYDFNTSAPNEDWYGVNLCQIHPPPSPFEPSPPFPLNLRLLLHLL 181
           VT+ +NT  P + WYG NLC  +   S ++ S    L L +L  +L
Sbjct: 142 VTFYYNTFIPRDTWYGFNLC--NDAASSYKVSAQKWLILVILGFVL 185

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388504722|gb|AFK40427.1| unknown [Medicago truncatula]

 Score =  183 bits (464), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 90/142 (63%), Positives = 107/142 (75%), Gaps = 6/142 (4%)

Query: 21  SEAETQ---LKPHAIESFTVNYIQF---GNCTYLVVIKTSCDSKNFTRDRISIAFGDAYG 74
           SE+E+Q   L PHA ESF ++YIQ    G+C+Y VVI TSC S  +T D+ISIAFGDAYG
Sbjct: 21  SESESQSVSLLPHANESFNISYIQMKNAGSCSYFVVISTSCSSPRYTSDQISIAFGDAYG 80

Query: 75  NQIYAPRLDDPFTKTFQSCSSDGFQIDGPCATDICYVYLHRSGLDGWEPESVKIISPNSS 134
           NQIYAPRLDDP + TF+SCSSD FQI+GPCA  ICYVYL+RSG  GW+PESVKI   +  
Sbjct: 81  NQIYAPRLDDPSSGTFESCSSDTFQINGPCAYQICYVYLYRSGSSGWKPESVKINGYSGE 140

Query: 135 PVTYDFNTSAPNEDWYGVNLCQ 156
           PVT+ +NT  P + WYG NLC 
Sbjct: 141 PVTFYYNTFIPRDTWYGFNLCN 162

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388504914|gb|AFK40523.1| unknown [Medicago truncatula]

 Score =  182 bits (462), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 92/168 (54%), Positives = 114/168 (67%), Gaps = 8/168 (4%)

Query: 3   IKLAAHFLLLLAFSAFMLSEAET--QLKPHAIESFTVNYIQFG---NCTYLVVIKTSCDS 57
           +K+      L     F +SE+++   L+PHA+ESF V YIQ     NC+YLV+I TSC S
Sbjct: 2   MKMVLLLFCLATALTFKVSESKSAVSLQPHALESFDVGYIQMKGAENCSYLVMITTSCSS 61

Query: 58  KNFTRDRISIAFGDAYGNQIYAPRLDDPFTKTFQSCSSDGFQIDGPCATDICYVYLHRSG 117
             FT D+ISIAFGDA GNQ+YA RLDDP + TF+ CSSD FQ+DGPCA+ IC+ YL+RSG
Sbjct: 62  PKFTTDKISIAFGDASGNQVYAARLDDPKSGTFEQCSSDSFQLDGPCASPICFAYLYRSG 121

Query: 118 L---DGWEPESVKIISPNSSPVTYDFNTSAPNEDWYGVNLCQIHPPPS 162
                GWEPESVKI   NS  VT+ FN+S P++ WYG N C    PPS
Sbjct: 122 STDNKGWEPESVKIYGYNSDAVTFTFNSSIPSDTWYGYNYCDTPSPPS 169

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297797187|ref|XP_002866478.1| hypothetical protein ARALYDRAFT_496397 [Arabidopsis lyrata subsp. lyrata] gi|297312313|gb|EFH42737.1| hypothetical protein ARALYDRAFT_496397 [Arabidopsis lyrata subsp. lyrata]

 Score =  182 bits (462), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 94/182 (51%), Positives = 122/182 (67%), Gaps = 10/182 (5%)

Query: 5   LAAHFLLLLAFSAFM-LSEAETQ-LKPHAIESFTVNYIQ-FGN-CTYLVVIKTSCDSKNF 60
           ++     L++F+ F+ +S +E++ L+PH  ESF V+ IQ  GN C+Y V+I TSC S  +
Sbjct: 2   VSVRLFTLISFAFFIFISVSESKVLEPHVAESFNVSLIQRLGNTCSYTVIISTSCSSTRY 61

Query: 61  TRDRISIAFGDAYGNQIYAPRLDDPFTKTFQSCSSDGFQIDGPCATDICYVYLHRSGLDG 120
           TRD+IS+AFGD YGNQIYAPRLDDP TKTF+ CSSD FQI+GPC   ICYVYL+RSG DG
Sbjct: 62  TRDQISVAFGDGYGNQIYAPRLDDPSTKTFEQCSSDTFQINGPCTYQICYVYLYRSGPDG 121

Query: 121 WEPESVKIISPNSSPVTYDFNTSAPNEDWYGVNLCQIHPPPSPFEPSPPFPLNLRLLLHL 180
           W P+SVKI S  S  VT+ +NT  P   WYG N C      +    S    + LR ++ +
Sbjct: 122 WIPDSVKIFSHGSKAVTFSYNTHVPESVWYGFNYC------NRASDSNVLAIGLRRIVII 175

Query: 181 LL 182
           LL
Sbjct: 176 LL 177

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388491126|gb|AFK33629.1| unknown [Medicago truncatula]

 Score =  182 bits (462), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 92/168 (54%), Positives = 114/168 (67%), Gaps = 8/168 (4%)

Query: 3   IKLAAHFLLLLAFSAFMLSEAET--QLKPHAIESFTVNYIQFG---NCTYLVVIKTSCDS 57
           +K+      L     F +SE+++   L+PHA+ESF V YIQ     NC+YLV+I TSC S
Sbjct: 2   MKMVLLLFCLATALTFKVSESKSAVSLQPHALESFDVGYIQMKGAENCSYLVMITTSCSS 61

Query: 58  KNFTRDRISIAFGDAYGNQIYAPRLDDPFTKTFQSCSSDGFQIDGPCATDICYVYLHRSG 117
             FT D+ISIAFGDA GNQ+YA RLDDP + TF+ CSSD FQ+DGPCA+ IC+ YL+RSG
Sbjct: 62  PKFTTDKISIAFGDASGNQVYAARLDDPKSGTFEQCSSDSFQLDGPCASPICFAYLYRSG 121

Query: 118 L---DGWEPESVKIISPNSSPVTYDFNTSAPNEDWYGVNLCQIHPPPS 162
                GWEPESVKI   NS  VT+ FN+S P++ WYG N C    PPS
Sbjct: 122 STDNKGWEPESVKIYGYNSDAVTFTFNSSIPSDTWYGYNYCGTPSPPS 169

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	193
TAIR|locus:2167908	190	AT5G62200 "AT5G62200" [Arabido	0.658	0.668	0.635	4e-42
TAIR|locus:4515102981	179	AT2G41475 "AT2G41475" [Arabido	0.658	0.709	0.519	4e-35
TAIR|locus:2167928	223	AT5G62210 "AT5G62210" [Arabido	0.580	0.502	0.491	6.4e-28
TAIR|locus:2182865	213	ATS3 "AT5G07190" [Arabidopsis	0.647	0.586	0.453	3.6e-25

TAIR|locus:2167908 AT5G62200 "AT5G62200" [Arabidopsis thaliana (taxid:3702)]

 Score = 446 (162.1 bits), Expect = 4.0e-42, P = 4.0e-42
 Identities = 82/129 (63%), Positives = 93/129 (72%)

Query:    29 PHAIESFTVNYIQ-FGN-CTYLVVIKTSCDSKNFTRDRISIAFGDAYGNQIYAPRLDDPF 86
             PH  ESF V+ IQ  GN C Y V+I TSC S  +TRD+IS+AFGD YGNQIYAPRLDDP 
Sbjct:    30 PHVAESFNVSLIQKLGNTCAYTVIISTSCSSTRYTRDQISVAFGDGYGNQIYAPRLDDPS 89

Query:    87 TKTFQSCSSDGFQIDGPCATDICYVYLHRSGLDGWEPESVKIISPNSSPVTYDFNTSAPN 146
             TKTF+ CSSD FQI+GPC   ICYVYL+RSG DGW P +VKI S  S  VT+ +NT  P 
Sbjct:    90 TKTFEQCSSDTFQINGPCTYQICYVYLYRSGPDGWIPNTVKIYSHGSKAVTFPYNTYVPE 149

Query:   147 EDWYGVNLC 155
               WYG N C
Sbjct:   150 SVWYGFNYC 158

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0031225 "anchored to membrane" evidence=TAS

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0009611 "response to wounding" evidence=RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA

TAIR|locus:4515102981 AT2G41475 "AT2G41475" [Arabidopsis thaliana (taxid:3702)]

 Score = 380 (138.8 bits), Expect = 4.0e-35, P = 4.0e-35
 Identities = 68/131 (51%), Positives = 92/131 (70%)

Query:    28 KPHAIESFTVNYIQFGN---CTYLVVIKTSCDSKNFTRDRISIAFGDAYGNQIYAPRLDD 84
             KP  I+SF +   +  N   C+Y V+IKTSC S ++TRD+ISI+FGD YGN++Y  RLDD
Sbjct:    29 KPLPIDSF-IPKPKLENAAACSYTVIIKTSCSSVSYTRDKISISFGDVYGNEVYVKRLDD 87

Query:    85 PFTKTFQSCSSDGFQIDGPCATDICYVYLHRSGLDGWEPESVKIISPNSSPVTYDFNTSA 144
             P ++TF+ CSSD ++I GPC  D+CY+YL R G DGW+PE+VKI   +   VT+ +N   
Sbjct:    88 PSSRTFEKCSSDTYKISGPCMRDVCYLYLLRQGSDGWKPENVKIYGSSIRSVTFYYNLFL 147

Query:   145 PNEDWYGVNLC 155
             PN  WYG N+C
Sbjct:   148 PNSVWYGFNVC 158

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2167928 AT5G62210 "AT5G62210" [Arabidopsis thaliana (taxid:3702)]

 Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
 Identities = 56/114 (49%), Positives = 75/114 (65%)

Query:    44 NCTYLVVIKTSCDSKNFTRDRISIAFGDAYGNQIYAPRLDDPFTKT--FQSCSSDGFQID 101
             +C Y V++ TSC S +++RD+++IA GDA  NQ+ APRLD P +    F+ CSSD FQ+ 
Sbjct:    39 SCPYTVIVTTSCFSPDWSRDQVTIALGDADDNQVVAPRLDKPLSGGGGFEKCSSDTFQVK 98

Query:   102 GPCATDICYVYLHRSGLDGWEPESVKIISPNSSPVTYDFNTSAPNEDWYGVNLC 155
             G C   IC VY++RSG DGW PE+V+I    S  V +DFN + P   WYG N C
Sbjct:    99 GKCLNTICSVYIYRSGTDGWIPETVEIYKEGSKSVKFDFNKNVPENIWYGNNYC 152

GO:0003674 "molecular_function" evidence=ND

GO:0031225 "anchored to membrane" evidence=TAS

GO:0080167 "response to karrikin" evidence=IEP

GO:0009611 "response to wounding" evidence=RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA

GO:0009718 "anthocyanin-containing compound biosynthetic process" evidence=RCA

GO:0009744 "response to sucrose stimulus" evidence=RCA

GO:0010224 "response to UV-B" evidence=RCA

TAIR|locus:2182865 ATS3 "AT5G07190" [Arabidopsis thaliana (taxid:3702)]

 Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
 Identities = 59/130 (45%), Positives = 79/130 (60%)

Query:    30 HAIESFTVNYIQFGNCTYLVVIKTSCDSKNFTRDRISIAFGDAYGNQIYAPRLDDPFTKT 89
             HA +  ++  +Q G C Y VV+ TSC S   TRD+ISI FGDA GN++YAP+L       
Sbjct:    20 HAFD-LSIIQMQQGTCPYTVVVMTSCLSPESTRDQISIVFGDADGNKVYAPKLGGLVRGP 78

Query:    90 --FQSCSSDGFQIDGPCATD-ICYVYLHRSGLDGWEPESVKIISPNSSPVTYDFNTSAPN 146
                  CS++ FQ+ G C  D IC +Y++R+G DGW PES++I S  S  V +DF+ S P 
Sbjct:    79 GGLGKCSTNTFQVRGQCLNDPICSLYINRNGPDGWVPESIEIYSEGSKSVKFDFSKSVPQ 138

Query:   147 -EDWYGVNLC 155
                WYG N C
Sbjct:   139 LNTWYGHNNC 148


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.136   0.430    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      193       153   0.00081  105 3  11 22  0.49    31
                                                     30  0.41    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  600 (64 KB)
  Total size of DFA:  166 KB (2098 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  15.03u 0.17s 15.20t   Elapsed:  00:00:00
  Total cpu time:  15.03u 0.17s 15.20t   Elapsed:  00:00:00
  Start:  Fri May 10 20:36:45 2013   End:  Fri May 10 20:36:45 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0005634 "nucleus" evidence=ISM

GO:0009793 "embryo development ending in seed dormancy" evidence=RCA;TAS

GO:0031225 "anchored to membrane" evidence=TAS

GO:0016020 "membrane" evidence=IDA

GO:0009737 "response to abscisic acid stimulus" evidence=RCA

GO:0009845 "seed germination" evidence=RCA

GO:0010162 "seed dormancy process" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	193
pfam06232	126	pfam06232, ATS3, Embryo-specific protein 3, (ATS3)	2e-54
cd00113	116	cd00113, PLAT, PLAT (Polycystin-1, Lipoxygenase, A	2e-22

>gnl|CDD|218949 pfam06232, ATS3, Embryo-specific protein 3, (ATS3)

 Score =  169 bits (429), Expect = 2e-54
 Identities = 65/114 (57%), Positives = 80/114 (70%), Gaps = 1/114 (0%)

Query: 43  GNCTYLVVIKTSCDSKNFTRDRISIAFGDAYGNQIYAPRLDDPFT-KTFQSCSSDGFQID 101
            +C+Y V+IKTSC S  +T D+ISIAFGDAYGNQ+Y PRLDDP +   F+ C++D FQ+ 
Sbjct: 13  SSCSYTVIIKTSCSSPAYTTDQISIAFGDAYGNQVYVPRLDDPSSGGGFERCTTDTFQVS 72

Query: 102 GPCATDICYVYLHRSGLDGWEPESVKIISPNSSPVTYDFNTSAPNEDWYGVNLC 155
           GPC   ICY+YL+RSG DGW PE+V I      PVT+ FNT  P   WYG N C
Sbjct: 73  GPCTYPICYLYLYRSGTDGWIPETVTIYGYGYPPVTFYFNTFLPEGVWYGFNYC 126

Family of plant seed-specific proteins. Length = 126

>gnl|CDD|238061 cd00113, PLAT, PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology 2) domain

 Score = 87.0 bits (216), Expect = 2e-22
 Identities = 40/117 (34%), Positives = 48/117 (41%), Gaps = 9/117 (7%)

Query: 45  CTYLVVIKTSCDSKNFTRDRISIAFGDAYGNQIYAPRLDDPFTKTFQSCSSDGFQIDGPC 104
           C Y V IKT       T   IS+A     GN    P LD P   +F+  S+D FQID   
Sbjct: 1   CRYTVTIKTGDKKGAGTDSNISLALYGENGNSSDIPILDGPG--SFERGSTDTFQIDLKL 58

Query: 105 AT-DICYVYLHRSG---LDGWEPESVKIISPNSSPVTYDF--NTSAPNEDWYGVNLC 155
              DI  VYL R G    DGW  ES+ + +   +   Y F  N       WY     
Sbjct: 59  DIGDITKVYLRRDGSGLSDGWYCESITVQA-LGTKKVYTFPVNRWVLGGKWYTSVRS 114

It consists of an eight stranded beta-barrel. The domain can be found in various domain architectures, in case of lipoxygenases, alpha toxin, lipases and polycystin, but also as a single domain or as repeats.The putative function of this domain is to facilitate access to sequestered membrane or micelle bound substrates. Length = 116

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	193
PF06232	125	ATS3: Embryo-specific protein 3, (ATS3); InterPro:	100.0
cd00113	116	PLAT PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin	99.86
cd01754	129	PLAT_plant_stress PLAT/LH2 domain of plant-specifi	99.81
cd01753	113	PLAT_LOX PLAT domain of 12/15-lipoxygenase. As a u	99.67
cd01756	120	PLAT_repeat PLAT/LH2 domain repeats of family of p	99.63
cd01752	120	PLAT_polycystin PLAT/LH2 domain of polycystin-1 li	99.58
cd02899	109	PLAT_SR Scavenger receptor protein. A subfamily of	99.5
smart00308	105	LH2 Lipoxygenase homology 2 (beta barrel) domain.	99.46
PF01477	113	PLAT: PLAT/LH2 domain; InterPro: IPR001024 Lipoxyg	99.35
cd01757	114	PLAT_RAB6IP1 PLAT/LH2 domain present in RAB6 inter	98.85
cd01755	120	PLAT_lipase PLAT/ LH2 domain present in connection	97.84
cd01758	137	PLAT_LPL PLAT/ LH2 domain present in lipoprotein l	96.76
KOG4063	158	consensus Major epididymal secretory protein HE1 [	81.75

>PF06232 ATS3: Embryo-specific protein 3, (ATS3); InterPro: IPR010417 This is a family of plant seed-specific proteins identified in Arabidopsis thaliana (Mouse-ear cress)

Probab=100.00  E-value=5.8e-59  Score=370.01  Aligned_cols=114  Identities=61%  Similarity=1.130  Sum_probs=112.7

Q ss_pred             cCCceEEEEEEecCCCCccCCceeEEEEecCCCCeEEeeCCCCCCC-CCccCCcccceeeecCCCccccEEEEEEcCCCC
Q 029433           42 FGNCTYLVVIKTSCDSKNFTRDRISIAFGDAYGNQIYAPRLDDPFT-KTFQSCSSDGFQIDGPCATDICYVYLHRSGLDG  120 (193)
Q Consensus        42 ~~~C~YtV~IkTsC~s~agT~d~ISl~FgDa~Gn~V~~~~Ld~p~~-~~FErCs~DtF~v~GpCl~~IC~lyL~r~G~dG  120 (193)
                      +++|+|||+|||||+|+|+|+|+|||+||||+||+||++|||+|++ ++||||++|+|+|+|+|+++||||||+|+|+||
T Consensus        11 ~~~CsYtv~IkTsC~s~a~T~d~Isi~FgDa~Gn~v~~~~Ld~p~~~~~FErCs~DtF~v~G~C~~~IC~lyL~r~G~dG   90 (125)
T PF06232_consen   11 AGSCSYTVTIKTSCSSPAGTDDQISIAFGDAYGNQVYVPRLDDPGSGDTFERCSTDTFQVTGPCLYQICYLYLYRSGSDG   90 (125)
T ss_pred             CCCCcEEEEEEeCcCCCcCCcceEEEEEecCCCCEEEEccCCCCCccCchhcCCcceeEeecccCCcccEEEEEEccCCC
Confidence            6789999999999999999999999999999999999999999998 999999999999999999999999999999999


Q ss_pred             ceecEEEEecCCCCceeEEecccCCCCCceeeecC
Q 029433          121 WEPESVKIISPNSSPVTYDFNTSAPNEDWYGVNLC  155 (193)
Q Consensus       121 W~pe~V~V~~~~~~~vtF~~n~~LP~~vwyG~N~C  155 (193)
                      |+||||+||+++++|++||||+|||+++|||||+|
T Consensus        91 W~Pe~V~Iy~~~~~~~~F~~~~~lp~~vwyG~n~C  125 (125)
T PF06232_consen   91 WKPEWVQIYGSGSKPVTFYFNTFLPNGVWYGFNYC  125 (125)
T ss_pred             CEeCeEEEEEcCCCCeEEECCCcCCCCCcccccCC
Confidence            99999999999999999999999999999999999

ATS3 is expressed in a pattern similar to the Arabidopsis seed storage protein genes [].

>cd00113 PLAT PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology 2) domain

Probab=99.86  E-value=4.5e-21  Score=143.57  Aligned_cols=109  Identities=35%  Similarity=0.472  Sum_probs=99.2

Q ss_pred             ceEEEEEEecCCCCccCCceeEEEEecCCCCeEEeeCCCCCCCCCccCCcccceeeecC-CCccccEEEEEEcCCC---C
Q 029433           45 CTYLVVIKTSCDSKNFTRDRISIAFGDAYGNQIYAPRLDDPFTKTFQSCSSDGFQIDGP-CATDICYVYLHRSGLD---G  120 (193)
Q Consensus        45 C~YtV~IkTsC~s~agT~d~ISl~FgDa~Gn~V~~~~Ld~p~~~~FErCs~DtF~v~Gp-Cl~~IC~lyL~r~G~d---G  120 (193)
                      |.|+|+|+||+...|||+++|.|.+.+++|++..+..+++++.  |||+++|+|.+..+ .++.+++|.|.+++..   +
T Consensus         1 ~~Y~v~V~Tg~~~~agT~~~v~i~l~g~~g~s~~~~l~~~~~~--f~~g~~~~f~v~~~~~lG~i~~v~l~~d~~g~~~~   78 (116)
T cd00113           1 CRYTVTIKTGDKKGAGTDSNISLALYGENGNSSDIPILDGPGS--FERGSTDTFQIDLKLDIGDITKVYLRRDGSGLSDG   78 (116)
T ss_pred             CEEEEEEEECCCCCCCccCEEEEEEEeCCCCcccEEccCCCCc--ccCCCceEEEEeccCCCcCeEEEEEEECCCCCCCC
Confidence            7899999999999999999999999999999999887766553  99999999999999 6699999999999884   9


Q ss_pred             ceecEEEEecCCC-CceeEEecccCCCCCceeeecC
Q 029433          121 WEPESVKIISPNS-SPVTYDFNTSAPNEDWYGVNLC  155 (193)
Q Consensus       121 W~pe~V~V~~~~~-~~vtF~~n~~LP~~vwyG~N~C  155 (193)
                      |++++|+|..... ....|.++.||..+.++..++|
T Consensus        79 W~l~~V~V~~~~~~~~~~F~~~~Wl~~~~~~~~~r~  114 (116)
T cd00113          79 WYCESITVQALGTKKVYTFPVNRWVLGGKWYTSVRS  114 (116)
T ss_pred             EEEeEEEEEeCCCCCEEEEEeCCCcccCCCCCceee
Confidence            9999999997654 7899999999999998887765

It consists of an eight stranded beta-barrel. The domain can be found in various domain architectures, in case of lipoxygenases, alpha toxin, lipases and polycystin, but also as a single domain or as repeats.The putative function of this domain is to facilitate access to sequestered membrane or micelle bound substrates.

>cd01754 PLAT_plant_stress PLAT/LH2 domain of plant-specific single domain protein family with unknown function

Probab=99.81  E-value=2.1e-19  Score=142.86  Aligned_cols=109  Identities=24%  Similarity=0.346  Sum_probs=94.0

Q ss_pred             ceEEEEEEecCCCCccCCceeEEEEecCCCCeEEeeCCC------CCCCCCccCCcccceeeecCCC-ccccEEEEEEcC
Q 029433           45 CTYLVVIKTSCDSKNFTRDRISIAFGDAYGNQIYAPRLD------DPFTKTFQSCSSDGFQIDGPCA-TDICYVYLHRSG  117 (193)
Q Consensus        45 C~YtV~IkTsC~s~agT~d~ISl~FgDa~Gn~V~~~~Ld------~p~~~~FErCs~DtF~v~GpCl-~~IC~lyL~r~G  117 (193)
                      |.|+|+|+||....|||+++|+|.+.+..|+.-.+..++      +++.+.|||+++|+|.|..++. ++||++.|.+|+
T Consensus         1 ~~Y~I~V~TG~~~gAGTdanV~i~l~G~~G~s~~~~l~~~~~~l~~~~~~~FerG~~d~F~v~~~~~lG~l~~irI~HDn   80 (129)
T cd01754           1 CVYTIYVQTGSIWKAGTDSRISLQIYDADGPGLRIANLEAWGGLMGAGHDYFERGNLDRFSGRGPCLPSPPCWMNLTSDG   80 (129)
T ss_pred             CEEEEEEEECCCcccCCcceEEEEEEeCCCCcccEEcccccccccccccccccCCCccEEEEEeccCCCCeEEEEEEECC
Confidence            899999999999999999999999999999998887654      3557899999999999999986 899999999997


Q ss_pred             C---CCceecEEEEecCC----CCceeEEecccC-----CCCCceeee
Q 029433          118 L---DGWEPESVKIISPN----SSPVTYDFNTSA-----PNEDWYGVN  153 (193)
Q Consensus       118 ~---dGW~pe~V~V~~~~----~~~vtF~~n~~L-----P~~vwyG~N  153 (193)
                      +   ++|++++|+|....    .....|-.|+||     |.-+...+|
T Consensus        81 ~G~~p~W~l~~V~V~d~~~~~~~~~~~F~c~rWLa~d~~~~~~~~~~~  128 (129)
T cd01754          81 TGNHPGWYVNYVEVTQAGQHAPCMQHLFAVEQWLATDESPYMLTAVRN  128 (129)
T ss_pred             CCCCCCcccCEEEEEeCCCCCcCcEEEEEecEeccCCCCcceeEEEec
Confidence            6   69999999998643    236779999999     444544444

Many of its members are stress induced. In general, PLAT/LH2 consists of an eight stranded beta-barrel and it's proposed function is to mediate interaction with lipids or membrane bound proteins.

>cd01753 PLAT_LOX PLAT domain of 12/15-lipoxygenase

Probab=99.67  E-value=6.2e-16  Score=119.12  Aligned_cols=103  Identities=17%  Similarity=0.224  Sum_probs=90.7

Q ss_pred             eEEEEEEecCCCCccCCceeEEEEecCCCCeEEeeCCCCCCCCCccCCcccceeeecC-CCccccEEEEEEcCC---CCc
Q 029433           46 TYLVVIKTSCDSKNFTRDRISIAFGDAYGNQIYAPRLDDPFTKTFQSCSSDGFQIDGP-CATDICYVYLHRSGL---DGW  121 (193)
Q Consensus        46 ~YtV~IkTsC~s~agT~d~ISl~FgDa~Gn~V~~~~Ld~p~~~~FErCs~DtF~v~Gp-Cl~~IC~lyL~r~G~---dGW  121 (193)
                      .|+|+|+||-...|||+++|.|.+.+..|+.-.+ .|+++.. .|||+++|+|.+..+ .+++|++|.|.+|++   ++|
T Consensus         2 ~Y~V~V~Tg~~~~AGT~a~V~i~l~G~~g~S~~~-~L~~~~~-~FerG~~d~F~v~~~~~lG~l~~i~i~~d~~g~~~~W   79 (113)
T cd01753           2 EYKVTVATGSSLFAGTDDYIYLTLVGTAGESEKQ-LLDRPGY-DFERGAVDEYKVKVPEDLGELLLVRLRKRKYLLFDAW   79 (113)
T ss_pred             EEEEEEEECCCcCCccccEEEEEEEECCCcccCE-EcCCCCC-ccCCCCeeEEEEecccCCCCcEEEEEEECCCCCCCCe
Confidence            5999999999999999999999999999998776 4777765 499999999999987 569999999999965   799


Q ss_pred             eecEEEEecCCCCceeEEecccCCCCCce
Q 029433          122 EPESVKIISPNSSPVTYDFNTSAPNEDWY  150 (193)
Q Consensus       122 ~pe~V~V~~~~~~~vtF~~n~~LP~~vwy  150 (193)
                      ++++|+|.+.......|..++||..+..+
T Consensus        80 ~l~~V~V~~~~~~~~~F~c~rWl~~~~~~  108 (113)
T cd01753          80 FCNYITVTGPGGDEYHFPCYRWIEGYGTL  108 (113)
T ss_pred             eecEEEEEcCCCCEEEEEhHHeECCCCEE
Confidence            99999999888667889999999765443

As a unique subfamily of the mammalian lipoxygenases, they catalyze enzymatic lipid peroxidation in complex biological structures via direct dioxygenation of phospholipids and cholesterol esters of biomembranes and plasma lipoproteins. Both types of enzymes are cytosolic but need this domain to access their sequestered membrane or micelle bound substrates.

>cd01756 PLAT_repeat PLAT/LH2 domain repeats of family of proteins with unknown function

Probab=99.63  E-value=4.8e-15  Score=113.90  Aligned_cols=100  Identities=19%  Similarity=0.246  Sum_probs=90.3

Q ss_pred             eEEEEEEecCCCCccCCceeEEEEecCCCCeEEeeCCCCC-CCCCccCCcccceeeecCCCccccEEEEEEcCC---CCc
Q 029433           46 TYLVVIKTSCDSKNFTRDRISIAFGDAYGNQIYAPRLDDP-FTKTFQSCSSDGFQIDGPCATDICYVYLHRSGL---DGW  121 (193)
Q Consensus        46 ~YtV~IkTsC~s~agT~d~ISl~FgDa~Gn~V~~~~Ld~p-~~~~FErCs~DtF~v~GpCl~~IC~lyL~r~G~---dGW  121 (193)
                      .|+|+|+||-...|||+++|.|.+....|+.-.+ .|+++ ..+.|||+++|+|.+...-++.+.+|.|.++++   ++|
T Consensus         2 ~Y~v~v~TG~~~~AGT~a~V~i~L~G~~g~s~~~-~L~~~~~~~~FerGs~d~F~i~~~~lG~l~~i~i~~d~~g~~~~W   80 (120)
T cd01756           2 TYEVTVKTGDVKGAGTDANVFITLYGENGDTGKR-KLKKSNNKNKFERGQTDKFTVEAVDLGKLKKIRIGHDNSGLGAGW   80 (120)
T ss_pred             EEEEEEEECCCcCCCCCcEEEEEEEeCCCccccE-EccCCCcCCcccCCCeEEEEEEecCCCCeEEEEEEECCCCCCCCc
Confidence            5999999999999999999999999999987765 48876 667999999999999999899999999999976   699


Q ss_pred             eecEEEEecCC-CCceeEEecccCCC
Q 029433          122 EPESVKIISPN-SSPVTYDFNTSAPN  146 (193)
Q Consensus       122 ~pe~V~V~~~~-~~~vtF~~n~~LP~  146 (193)
                      ++++|+|.... .+...|.+++||-.
T Consensus        81 ~~~~V~V~~~~~~~~~~F~~~~Wl~~  106 (120)
T cd01756          81 FLDKVEIREPGTGDEYTFPCNRWLDK  106 (120)
T ss_pred             EEeEEEEEECCCceEEEEEeCCccCC
Confidence            99999999765 56688999999953

In general, PLAT/LH2 consists of an eight stranded beta-barrel and it's proposed function is to mediate interaction with lipids or membrane bound proteins.

>cd01752 PLAT_polycystin PLAT/LH2 domain of polycystin-1 like proteins

Probab=99.58  E-value=1.7e-14  Score=111.04  Aligned_cols=99  Identities=20%  Similarity=0.228  Sum_probs=89.2

Q ss_pred             eEEEEEEecCCCCccCCceeEEEEecCCCCeEEeeCCCCCCCCCccCCcccceeeecCC-CccccEEEEEEcCC---CCc
Q 029433           46 TYLVVIKTSCDSKNFTRDRISIAFGDAYGNQIYAPRLDDPFTKTFQSCSSDGFQIDGPC-ATDICYVYLHRSGL---DGW  121 (193)
Q Consensus        46 ~YtV~IkTsC~s~agT~d~ISl~FgDa~Gn~V~~~~Ld~p~~~~FErCs~DtF~v~GpC-l~~IC~lyL~r~G~---dGW  121 (193)
                      .|+|+|+||-...|||+++|.|.+....|+.-.+ .|+++....|||+++|+|.+..+. ++++++|.|.++++   ++|
T Consensus         2 ~Y~v~v~Tg~~~gAGT~a~V~i~L~G~~g~s~~~-~L~~~~~~~F~rG~~~~f~i~~~~dlG~l~~i~l~hd~~g~~~~W   80 (120)
T cd01752           2 LYLVTVFTGWRRGAGTTAKVTITLYGAEGESEPH-HLRDPEKPIFERGSVDSFLLTTPFPLGELQSIRLWHDNSGLSPSW   80 (120)
T ss_pred             EEEEEEEECCCCCCCcccEEEEEEEeCCCCcccE-EcCCCCccceeCCCeeEEEecCccCCCCccEEEEEECCCCCCCCe
Confidence            5999999999999999999999999999998775 688887789999999999999875 59999999999975   699


Q ss_pred             eecEEEEecCC-CCceeEEecccCC
Q 029433          122 EPESVKIISPN-SSPVTYDFNTSAP  145 (193)
Q Consensus       122 ~pe~V~V~~~~-~~~vtF~~n~~LP  145 (193)
                      ++++|+|.... .....|..++||-
T Consensus        81 ~l~~V~V~~~~t~~~~~F~~~rWl~  105 (120)
T cd01752          81 YLSRVIVRDLQTGKKWFFLCNDWLS  105 (120)
T ss_pred             EEEEEEEEECCCCcEEEEEeCcEEC
Confidence            99999999764 5667899999995

Polycystins are a large family of membrane proteins composed of multiple domains, present in fish, invertebrates, mammals, and humans that are widely expressed in various cell types and whose biological functions remain poorly defined. In human, mutations in polycystin-1 (PKD1) and polycystin-2 (PKD2) have been shown to be the cause for autosomal dominant polycystic kidney disease (ADPKD). The generally proposed function of PLAT/LH2 domains is to mediate interaction with lipids or membrane bound proteins.

>cd02899 PLAT_SR Scavenger receptor protein

Probab=99.50  E-value=1.5e-13  Score=106.78  Aligned_cols=97  Identities=23%  Similarity=0.291  Sum_probs=85.6

Q ss_pred             eEEEEEEecCCCCccCCceeEEEEecCCCCeEEeeCCCCCCCCCccCCcccceeeecCCCccccEEEEEEcCC-CCceec
Q 029433           46 TYLVVIKTSCDSKNFTRDRISIAFGDAYGNQIYAPRLDDPFTKTFQSCSSDGFQIDGPCATDICYVYLHRSGL-DGWEPE  124 (193)
Q Consensus        46 ~YtV~IkTsC~s~agT~d~ISl~FgDa~Gn~V~~~~Ld~p~~~~FErCs~DtF~v~GpCl~~IC~lyL~r~G~-dGW~pe  124 (193)
                      .|+|+|+||-...|||+++|.|.+.+..|..=.. .|++    .|||++.|+|.|++..++++=.+.|.++|. |+|+++
T Consensus         2 ~Y~I~V~TG~~~~AGT~~~V~i~L~G~~g~S~~~-~L~~----~F~~G~~d~F~v~~~dLG~l~~i~l~n~g~~~~Wf~~   76 (109)
T cd02899           2 TYTASVQTGKDKEAGTNGTIEITLLGSSGRSNPK-TLSQ----GFYPGSLKRIRFRAADVGDINAIILSNTALNDPWYCD   76 (109)
T ss_pred             eEEEEEEECCCCCCCccceEEEEEEECCCCcCCE-EccC----ccCCCceEEEEECccccCceEEEEEECCCCCCCceee
Confidence            5999999999999999999999999999966553 3443    599999999999999999999999988887 799999


Q ss_pred             EEEEecCCCCceeEEecccC--CCC
Q 029433          125 SVKIISPNSSPVTYDFNTSA--PNE  147 (193)
Q Consensus       125 ~V~V~~~~~~~vtF~~n~~L--P~~  147 (193)
                      +|+|..+..+...|-.++||  |++
T Consensus        77 ~V~V~~~~g~~~~Fpc~rWla~~~~  101 (109)
T cd02899          77 YVRIKSEDGKVFAFNVKRWIGYPYE  101 (109)
T ss_pred             EEEEECCCCCEEEEEcceeeCCchh
Confidence            99999876777789999999  654

A subfamily of PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology 2) domain. It consists of an eight stranded beta-barrel. The domain can be found in various domain architectures, in case of lipoxygenases, alpha toxin, lipases and polycystin, but also as a single domain or as repeats.The putative function of this domain is to facilitate access to sequestered membrane or micelle bound substrates. This subfamily contains Toxoplasma gondii Scavenger protein TgSR1.

>smart00308 LH2 Lipoxygenase homology 2 (beta barrel) domain

Probab=99.46  E-value=9.1e-13  Score=97.37  Aligned_cols=98  Identities=18%  Similarity=0.185  Sum_probs=81.9

Q ss_pred             eEEEEEEecCCCCccCCceeEEEEecCCCCeEEeeCCCCCCCCCccCCcccceeeecCC-CccccEEEEEEcC-CCCcee
Q 029433           46 TYLVVIKTSCDSKNFTRDRISIAFGDAYGNQIYAPRLDDPFTKTFQSCSSDGFQIDGPC-ATDICYVYLHRSG-LDGWEP  123 (193)
Q Consensus        46 ~YtV~IkTsC~s~agT~d~ISl~FgDa~Gn~V~~~~Ld~p~~~~FErCs~DtF~v~GpC-l~~IC~lyL~r~G-~dGW~p  123 (193)
                      .|+|+|+||-...|||+++|.|.+....|+.-.. .+.......|||+++|+|.+..+. ++++.++.+.+++ .++|++
T Consensus         2 ~Y~v~V~Tg~~~~aGT~~~V~l~L~g~~~~s~~~-~~~~~~~~~f~~g~~~~f~v~~~~~lG~l~~v~v~~d~~~~~w~l   80 (105)
T smart00308        2 KYKVTVTTGGLDFAGTTASVSLSLVGAEGDGKES-KLDYLFKGIFARGSTYEFTFDVDEDFGELGAVKIKNEHRHPEWFL   80 (105)
T ss_pred             EEEEEEEECCccCCCccceEEEEEEeCCCCCcce-eccccCCccccCCceEEEEEecccCCCCcEEEEEEeCCCCCCeEE
Confidence            5999999999999999999999999999642211 112112235999999999999986 7999999999999 699999


Q ss_pred             cEEEEecC-CCCceeEEecccC
Q 029433          124 ESVKIISP-NSSPVTYDFNTSA  144 (193)
Q Consensus       124 e~V~V~~~-~~~~vtF~~n~~L  144 (193)
                      ++|+|.+. ......|-.++||
T Consensus        81 ~~V~V~~~~~~~~~~F~c~~Wl  102 (105)
T smart00308       81 KSITVKDLPTGGKYHFPCNSWV  102 (105)
T ss_pred             EEEEEEECCCCCEEEEEcCcee
Confidence            99999864 5678999999998

>PF01477 PLAT: PLAT/LH2 domain; InterPro: IPR001024 Lipoxygenases (1

Probab=99.35  E-value=1.6e-12  Score=95.52  Aligned_cols=99  Identities=22%  Similarity=0.254  Sum_probs=84.3

Q ss_pred             EEEEEEecCCCCccCCceeEEEEecCCCCeEEeeCCCCCCCCCccCCcccceeeecC-CCccccEEEEEEcCC---CCce
Q 029433           47 YLVVIKTSCDSKNFTRDRISIAFGDAYGNQIYAPRLDDPFTKTFQSCSSDGFQIDGP-CATDICYVYLHRSGL---DGWE  122 (193)
Q Consensus        47 YtV~IkTsC~s~agT~d~ISl~FgDa~Gn~V~~~~Ld~p~~~~FErCs~DtF~v~Gp-Cl~~IC~lyL~r~G~---dGW~  122 (193)
                      |+|.|+||-...|||+++|.|.+....|+.-...-++.+. ..+  .++|+|.+..+ -+++|.++.|.++|.   ++|+
T Consensus         1 Y~v~v~Tg~~~~aGT~~~V~i~l~G~~g~s~~~~l~~~~~-~~~--g~~d~F~i~~~~~lG~i~~i~i~~~~~~~~~~W~   77 (113)
T PF01477_consen    1 YRVTVKTGDERGAGTDANVYITLYGSKGKSGEIELLDPSG-FNF--GSTDTFTIETPEDLGEIQKIRIWHDGSGPSPSWY   77 (113)
T ss_dssp             EEEEEEEESSTEEEESSEEEEEEEETTEEEEEEEEEEEEE-TST--TEEEEEEEEESSCGCSEEEEEEEEESSSSSSEEE
T ss_pred             CEEEEEECCCCCCCcCCeEEEEEEECCCCcceEEEeeeee-ccc--CceEEeeeeecccCCCCcEEEEEEccCCCccceE
Confidence            9999999999999999999999999999987765444332 223  99999999995 679999999999955   7999


Q ss_pred             ecEEEEecC-CCCceeEEecccCCCCC
Q 029433          123 PESVKIISP-NSSPVTYDFNTSAPNED  148 (193)
Q Consensus       123 pe~V~V~~~-~~~~vtF~~n~~LP~~v  148 (193)
                      +++|+|... .....+|.++.||-.+.
T Consensus        78 l~~V~V~~~~~~~~~~F~~~~Wl~~~~  104 (113)
T PF01477_consen   78 LDSVVVTDGETGRTYTFPCNRWLDPDK  104 (113)
T ss_dssp             EEEEEEEETTTSEEEEEEEEEEESTTE
T ss_pred             EEEEEEEeCCCCcEEEEEcCCEECCCC
Confidence            999999874 56789999999996543

13.11.- from EC) are a class of iron-containing dioxygenases which catalyses the hydroperoxidation of lipids, containing a cis,cis-1,4-pentadiene structure. They are common in plants where they may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. In mammals a number of lipoxygenases isozymes are involved in the metabolism of prostaglandins and leukotrienes []. Sequence data is available for the following lipoxygenases: Plant lipoxygenases (1.13.11.12 from EC, IPR001246 from INTERPRO). Plants express a variety of cytosolic isozymes as well as what seems to be a chloroplast isozyme []. Mammalian arachidonate 5-lipoxygenase (1.13.11.34 from EC, IPR001885 from INTERPRO). Mammalian arachidonate 12-lipoxygenase (1.13.11.31 from EC, IPR001885 from INTERPRO). Mammalian erythroid cell-specific 15-lipoxygenase (1.13.11.33 from EC, IPR001885 from INTERPRO). The iron atom in lipoxygenases is bound by four ligands, three of which are histidine residues []. Six histidines are conserved in all lipoxygenase sequences, five of them are found clustered in a stretch of 40 amino acids. This region contains two of the three iron-ligands; the other histidines have been shown [] to be important for the activity of lipoxygenases. This entry represents a domain found in lipoxygenases and other enzymes. It is known as the PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology) domain, is found in a variety of membrane or lipid associated proteins. Structurally, this domain forms a beta-sandwich composed of two sheets of four strands each [, , ]. The most highly conserved regions coincide with the beta-strands, with most of the highly conserved residues being buried within the protein. An exception to this is a surface lysine or arginine that occurs on the surface of the fifth beta-strand of the eukaryotic domains. In pancreatic lipase, the lysine in this position forms a salt bridge with the procolipase protein. The conservation of a charged surface residue may indicate the location of a conserved ligand-binding site. It is thought that this domain may mediate membrane attachment via other protein binding partners.; GO: 0005515 protein binding; PDB: 3FG3_D 3FG1_C 3FG4_D 3DY5_A 2FNQ_B 3O8Y_B 3V99_B 3V92_A 3V98_B 1HPL_A ....

>cd01757 PLAT_RAB6IP1 PLAT/LH2 domain present in RAB6 interacting protein 1 (Rab6IP1)_like family

Probab=98.85  E-value=2.6e-08  Score=78.22  Aligned_cols=90  Identities=13%  Similarity=0.141  Sum_probs=74.7

Q ss_pred             eEEEEEEecCC-CCccCCceeEEEEecCCCCeEEeeCCCCCCCCCccCCcccceeeecCCCccccEEEEEEcCC---CCc
Q 029433           46 TYLVVIKTSCD-SKNFTRDRISIAFGDAYGNQIYAPRLDDPFTKTFQSCSSDGFQIDGPCATDICYVYLHRSGL---DGW  121 (193)
Q Consensus        46 ~YtV~IkTsC~-s~agT~d~ISl~FgDa~Gn~V~~~~Ld~p~~~~FErCs~DtF~v~GpCl~~IC~lyL~r~G~---dGW  121 (193)
                      .|.|+|.||-. ..|||+++|.|.+....|+.= ...|+++   .|      .|.+....++++-++.+.||.+   ++|
T Consensus         2 ~Y~VtV~TG~~~~gAGT~anV~i~L~G~~g~s~-~~~L~~~---~f------~~~v~~~~LG~L~~irIwHDnsG~~~~W   71 (114)
T cd01757           2 PYHVVIVPSKKLGGSMFTANPWICVSGELGETP-PLQIPKN---SL------EMTFDCQNLGKLTTVQIGHDNSGLLAKW   71 (114)
T ss_pred             eEEEEEEeCCCCCCCCCcceEEEEEEEcCCCcC-CEEecCC---ce------EEEEecCCcCCcEEEEEEECCCCCCCCe
Confidence            59999999999 699999999999999998643 3345532   34      5888778889999999999955   799


Q ss_pred             eecEEEEecC-CCCceeEEecccCC
Q 029433          122 EPESVKIISP-NSSPVTYDFNTSAP  145 (193)
Q Consensus       122 ~pe~V~V~~~-~~~~vtF~~n~~LP  145 (193)
                      ++++|+|... ......|-.|+||-
T Consensus        72 fl~~V~V~d~~t~~~~~FpC~rWLa   96 (114)
T cd01757          72 LVEYVMVRNEITGHTYKFPCGRWLG   96 (114)
T ss_pred             eeeEEEEEeCCCCCEEEEecCceec
Confidence            9999999984 55667799999994

PLAT/LH2 domains consists of an eight stranded beta-barrel. In RabIP1 this domain may participate in lipid-mediated modulation of Rab6IP1's function via it's generally proposed function of mediating interaction with lipids or membrane bound proteins.

>cd01755 PLAT_lipase PLAT/ LH2 domain present in connection with a lipase domain

Probab=97.84  E-value=0.00033  Score=54.53  Aligned_cols=91  Identities=10%  Similarity=0.066  Sum_probs=72.8

Q ss_pred             ceEEEEEEecCCCCccCCceeEEEEecCCCCeEEeeCCCCCCCCCccCCcccceee-ecCCCccccEEEEEEcCC-----
Q 029433           45 CTYLVVIKTSCDSKNFTRDRISIAFGDAYGNQIYAPRLDDPFTKTFQSCSSDGFQI-DGPCATDICYVYLHRSGL-----  118 (193)
Q Consensus        45 C~YtV~IkTsC~s~agT~d~ISl~FgDa~Gn~V~~~~Ld~p~~~~FErCs~DtF~v-~GpCl~~IC~lyL~r~G~-----  118 (193)
                      +.|.|.|.||-...++|+++|.|.+.-..|+.=.+ .|.++   .||++++|+|-+ .-..++++-.|.+.++.+     
T Consensus         1 ~hY~vtV~~~~~~~agt~~~v~v~L~G~~g~s~~~-~l~~~---~~~~g~~~sfli~t~~~lG~l~~v~~~~dn~~~~~~   76 (120)
T cd01755           1 WHYQVKVHLSGKKNLEVDGTFTVSLYGTKGETEQL-PIVLG---ELKPNKTYSFLIDTEVDIGDLLKVKFKWENNVINSN   76 (120)
T ss_pred             CEEEEEEEEeCccccCcCccEEEEEEcCCCCcccE-EEeCC---cccCCCEEEEEEEcCCCccceEEEEEEEcCCCcccc
Confidence            36999999999999999999999999888876544 23333   489999999999 667889999999999844     


Q ss_pred             -----CCceecEEEEe-cCCCCceeEE
Q 029433          119 -----DGWEPESVKII-SPNSSPVTYD  139 (193)
Q Consensus       119 -----dGW~pe~V~V~-~~~~~~vtF~  139 (193)
                           +.|+.+.|.|. +...+..+|=
T Consensus        77 ~~~~~p~~~~~~I~Vq~get~~~~~FC  103 (120)
T cd01755          77 SGETLPKLGARKIRVKSGETQKKFTFC  103 (120)
T ss_pred             cccCCCcEEEEEEEEEECCCCCEEEEE
Confidence                 48889999996 4454444443

This family contains two major subgroups, the lipoprotein lipase (LPL) and the pancreatic triglyceride lipase. LPL is a key enzyme in catabolism of plasma lipoprotein triglycerides (TGs). The central role of triglyceride lipases is in energy production. In general, PLAT/LH2 domain's proposed function is to mediate interaction with lipids or membrane bound proteins.

>cd01758 PLAT_LPL PLAT/ LH2 domain present in lipoprotein lipase (LPL)

Probab=96.76  E-value=0.017  Score=46.62  Aligned_cols=78  Identities=17%  Similarity=0.218  Sum_probs=62.2

Q ss_pred             ceEEEEEEecCCCCcc-CCceeEEEEecCCCCeEEeeCCCCCCCCCccCCcccceee-ecCCCccccEEEEEEcCCCCce
Q 029433           45 CTYLVVIKTSCDSKNF-TRDRISIAFGDAYGNQIYAPRLDDPFTKTFQSCSSDGFQI-DGPCATDICYVYLHRSGLDGWE  122 (193)
Q Consensus        45 C~YtV~IkTsC~s~ag-T~d~ISl~FgDa~Gn~V~~~~Ld~p~~~~FErCs~DtF~v-~GpCl~~IC~lyL~r~G~dGW~  122 (193)
                      +.|.|.|.||-...++ |+++|.|++.-..|+.=.+ .|.+|  +.+|++++|+|-+ .-..++++-.|.+...+..||.
T Consensus         1 yhYqVtV~~~~~~~~~~t~~~v~i~L~G~~g~S~~~-~l~~~--~~~~~G~t~sfLi~t~~dlG~L~~vk~~W~~n~~~~   77 (137)
T cd01758           1 FHYQLKIHFFNQTNRIETDPTFTISLYGTLGESENL-PLTLP--EGITGNKTNSFLITTEKDIGDLLMLKLKWEGSSLWS   77 (137)
T ss_pred             CeEEEEEEEecccCCCcccceEEEEEEcCCCcccCE-EEecC--cccCCCCeEEEEEECCCCcCCEEEEEEEEeCCCCCC
Confidence            4699999999988888 9999999999888876544 23334  3579999999999 6788899999999666665555


Q ss_pred             ecE
Q 029433          123 PES  125 (193)
Q Consensus       123 pe~  125 (193)
                      |-|
T Consensus        78 ~sW   80 (137)
T cd01758          78 NSW   80 (137)
T ss_pred             hhh
Confidence            444

LPL is a key enzyme in catabolism of plasma lipoprotein triglycerides (TGs) and has therefeore has a profound influence on triglyceride and high-density lipoprotein (HDL) cholesterol levels in the blood. In general, PLAT/LH2 domain's proposed function is to mediate interaction with lipids or membrane bound proteins.

>KOG4063 consensus Major epididymal secretory protein HE1 [Function unknown]

Probab=81.75  E-value=2  Score=36.37  Aligned_cols=65  Identities=20%  Similarity=0.220  Sum_probs=39.0

Q ss_pred             CchhhhhHHHHHHHHHHHhhhcccccCcccccc-cccccccccCCceEEEEEEecCCCCccCCceeEEEEec
Q 029433            1 MKIKLAAHFLLLLAFSAFMLSEAETQLKPHAIE-SFTVNYIQFGNCTYLVVIKTSCDSKNFTRDRISIAFGD   71 (193)
Q Consensus         1 ~~~~~~~h~ll~~a~~~~~~s~a~~~~~P~~~~-s~~~~~~q~~~C~YtV~IkTsC~s~agT~d~ISl~FgD   71 (193)
                      |+|+ ..-++.|+|++.++.+++.++.--|=.. .-.+...+-.+|.-+     =|.-+.||+..|+|.|--
T Consensus         1 m~ms-~~~~v~l~alls~a~aq~~~t~~k~C~ss~g~~~~V~i~~C~t~-----pC~lkKgt~~si~I~F~~   66 (158)
T KOG4063|consen    1 MMMS-FLKTVILLALLSLAAAQAISTGVKQCGSSDGTPLEVKIDGCPTT-----PCQLKKGTEASIQIDFAP   66 (158)
T ss_pred             CchH-HHHHHHHHHHHHHhhhcccCcccccccCCCCcceEEEecCCCCC-----ceEEecCCeEEEEEEEee
Confidence            7787 3445556666666666655431111111 111222235688754     899999999999999964

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	193
3vf1_A	698	11R-lipoxygenase; LOX, PLAT, beta sandwich, C2-lik	5e-07

>3vf1_A 11R-lipoxygenase; LOX, PLAT, beta sandwich, C2-like domain, non-heme iron, conformational change, dioxygenase, oxidoreductase; HET: SUC; 2.47A {Gersemia fruticosa} Length = 698

 Score = 48.0 bits (113), Expect = 5e-07
 Identities = 25/122 (20%), Positives = 39/122 (31%), Gaps = 10/122 (8%)

Query: 44  NCTYLVVIKTSCDSKNFTRDRISIAFGDAYGNQIYAPRLDDPFTKTFQSCSSDGFQIDGP 103
           +  Y + ++T       T   +SI      G +  A  LD  F   F+S  +D +   G 
Sbjct: 19  HMKYKITVETGDLRGAGTDASVSIKLTGKDGAETSAFSLDKYFHNDFESGGTDTYDQSGV 78

Query: 104 CATDICYVYLHRSGL---DGWEPESVKIISPNSSPVT---YDFNTSAPNEDWYGVNLCQI 157
              +I  + L  +G      W    V I   + +      Y F    P   W    L   
Sbjct: 79  DVGEIAMITLKENGFGLKSDWYIAKVIIEKIDEATGFSNKYIF----PCYRWVIKQLVVY 134

Query: 158 HP 159
             
Sbjct: 135 EG 136

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	193
3vf1_A	698	11R-lipoxygenase; LOX, PLAT, beta sandwich, C2-lik	99.73
1lox_A	662	15-lipoxygenase, 15LOX; oxidoreductase, 15LO_depot	99.54
3v98_A	691	Arachidonate 5-lipoxygenase; dioxygenase, oxidored	99.53
3dy5_A	1066	Allene oxide synthase-lipoxygenase protein; fusion	99.51
3fg1_A	696	Allene oxide synthase-lipoxygenase protein; arichi	99.4
3cwz_B	384	RAB6IP1, RAB6-interacting protein 1; RAB small GTP	99.31
2wxu_A	370	Phospholipase C; cytolysis, hydrolase, hemolysis,	99.1
1olp_A	370	Alpha-toxin; zinc phospholipase C, GAS gangrene de	99.03
1bu8_A	452	Protein (pancreatic lipase related protein 2); hyd	94.8
1rp1_A	450	Pancreatic lipase related protein 1; hydrolase, li	94.05
1gpl_A	432	RP2 lipase; serine esterase, hydrolase, lipid degr	92.97
1hpl_A	449	Lipase; hydrolase(carboxylic esterase); 2.30A {Equ	92.66
1w52_X	452	Pancreatic lipase related protein 2; detergent, cl	92.43

>3vf1_A 11R-lipoxygenase; LOX, PLAT, beta sandwich, C2-like domain, non-heme iron, conformational change, dioxygenase, oxidoreductase; HET: SUC; 2.47A {Gersemia fruticosa}

Probab=99.73  E-value=8e-18  Score=161.70  Aligned_cols=106  Identities=20%  Similarity=0.255  Sum_probs=96.3

Q ss_pred             cCCceEEEEEEecCCCCccCCceeEEEEecCCCCeEEeeCCCCCCCCCccCCcccceeeecCCCccccEEEEEEcCC---
Q 029433           42 FGNCTYLVVIKTSCDSKNFTRDRISIAFGDAYGNQIYAPRLDDPFTKTFQSCSSDGFQIDGPCATDICYVYLHRSGL---  118 (193)
Q Consensus        42 ~~~C~YtV~IkTsC~s~agT~d~ISl~FgDa~Gn~V~~~~Ld~p~~~~FErCs~DtF~v~GpCl~~IC~lyL~r~G~---  118 (193)
                      .++|.|+|+|+||+...|||+++|.|.+.+.+|.+.....|++|+.+.|||+++|+|.+++.|++++|+|.|.+||+   
T Consensus        17 ~~~~~Y~V~V~TG~~~~AGTda~V~I~L~G~~G~~S~~~~L~~~~~~~FeRGs~D~F~v~~~~LG~L~~IrI~hDnsG~~   96 (698)
T 3vf1_A           17 HHHMKYKITVETGDLRGAGTDASVSIKLTGKDGAETSAFSLDKYFHNDFESGGTDTYDQSGVDVGEIAMITLKENGFGLK   96 (698)
T ss_dssp             --CEEEEEEEEECSCCCSCSBCCEEEEEEETTSCBCCCEEECCBCSSSSCCCCEEEEEEEECCCSSEEEEEEEECCCSSB
T ss_pred             CCcceEEEEEEECCCCCCCCCceeEEEEEECCCCeecceEeCCCCCCccccCCeeEEEEEecccCCceEEEEEECCCCCC
Confidence            57999999999999999999999999999999995556689999999999999999999999999999999999976   


Q ss_pred             CCceecEEEEecCC-----CCceeEEecccCCCC
Q 029433          119 DGWEPESVKIISPN-----SSPVTYDFNTSAPNE  147 (193)
Q Consensus       119 dGW~pe~V~V~~~~-----~~~vtF~~n~~LP~~  147 (193)
                      +||++++|+|....     .....|..++||-.+
T Consensus        97 ~~Wfl~~V~V~~~~t~~~~g~~~~Fpc~rWL~~d  130 (698)
T 3vf1_A           97 SDWYIAKVIIEKIDEATGFSNKYIFPCYRWVIKQ  130 (698)
T ss_dssp             CCCEEEEEEEEEECTTTCCEEEEEEEEEEECSSE
T ss_pred             CCeEEeEEEEEcCCCCCCCCcEEEEEhhhcccCC
Confidence            79999999998765     467889999999765

>1lox_A 15-lipoxygenase, 15LOX; oxidoreductase, 15LO_depot2; HET: RS7; 2.40A {Oryctolagus cuniculus} SCOP: a.119.1.2 b.12.1.1 PDB: 2p0m_A*

Probab=99.54  E-value=1.9e-14  Score=137.60  Aligned_cols=95  Identities=9%  Similarity=0.133  Sum_probs=87.3

Q ss_pred             eEEEEEEecCCCCccCCceeEEEEecCCCCeEEeeCCCCCCCCCccCCcccceeeecCCC-ccccEEEEEEcCC---CCc
Q 029433           46 TYLVVIKTSCDSKNFTRDRISIAFGDAYGNQIYAPRLDDPFTKTFQSCSSDGFQIDGPCA-TDICYVYLHRSGL---DGW  121 (193)
Q Consensus        46 ~YtV~IkTsC~s~agT~d~ISl~FgDa~Gn~V~~~~Ld~p~~~~FErCs~DtF~v~GpCl-~~IC~lyL~r~G~---dGW  121 (193)
                      .|+|+|+||....|||+++|+|.+.+..|+..... |+     .|||+++|+|.+..+|. +++|++.|.++++   ++|
T Consensus         2 ~Y~V~V~TG~~~~AGTda~V~i~L~G~~G~s~~~~-L~-----~FerG~~d~F~v~~~~dlG~l~~I~I~~d~~g~~~~W   75 (662)
T 1lox_A            2 VYRVCVSTGASIYAGSKNKVELWLVGQHGEVELGS-CL-----RPTRNKEEEFKVNVSKYLGSLLFVRLRKKHFLKEDAW   75 (662)
T ss_dssp             EEEEEEEECCSTTCCCSSEEEEEEEESSCEEEEEE-EE-----CCCTTCEEEEEEECSSCCCSEEEEEEEEECSSSCCCE
T ss_pred             eEEEEEEECCCcCCCcCCcEEEEEEECCCCccCee-CC-----CcCCCCccEEEEEecCCCCcceEEEEEeCCCCCCCCc
Confidence            59999999999999999999999999999998876 86     89999999999999776 8999999999987   899


Q ss_pred             eecEEEEecCC--CCceeEEecccCCC
Q 029433          122 EPESVKIISPN--SSPVTYDFNTSAPN  146 (193)
Q Consensus       122 ~pe~V~V~~~~--~~~vtF~~n~~LP~  146 (193)
                      ++++|+|.+++  .....|..|+||-.
T Consensus        76 fl~~V~V~~p~~~g~~~~F~Cn~WL~~  102 (662)
T 1lox_A           76 FCNWISVQALGAAEDKYWFPCYRWVVG  102 (662)
T ss_dssp             EEEEEEEEESSSCCCCEEEEEEEEECS
T ss_pred             EEeEEEEecCCCCCcEEEEEeceEecC
Confidence            99999999976  45599999999954

>3v98_A Arachidonate 5-lipoxygenase; dioxygenase, oxidoreductase; 2.07A {Homo sapiens} PDB: 3v99_A* 3o8y_A 3v92_B

Probab=99.53  E-value=2.4e-14  Score=137.62  Aligned_cols=102  Identities=16%  Similarity=0.233  Sum_probs=89.3

Q ss_pred             cCCceEEEEEEecCCCCccCCceeEEEEecCCCCeEEeeCCCCCCCCCccCCcccceeeecCC-CccccEEEEEEcCC--
Q 029433           42 FGNCTYLVVIKTSCDSKNFTRDRISIAFGDAYGNQIYAPRLDDPFTKTFQSCSSDGFQIDGPC-ATDICYVYLHRSGL--  118 (193)
Q Consensus        42 ~~~C~YtV~IkTsC~s~agT~d~ISl~FgDa~Gn~V~~~~Ld~p~~~~FErCs~DtF~v~GpC-l~~IC~lyL~r~G~--  118 (193)
                      .+.|.|+|+|+||....|||+++|.|.+...+|..-.+ .|++   +.|||+++|+|.++.++ ++++|+|.|.+|++  
T Consensus        19 ~~~~~Y~V~V~TG~~~~AGTda~V~I~L~G~~G~S~~~-~L~~---~~FeRG~~D~F~v~~~~~LG~L~~IrI~hDnsG~   94 (691)
T 3v98_A           19 SHMPSYTVTVATGSQEHAGTDDYIYLSLVGSAGCSEKH-LLDK---GSFERGAVDSYDVTVDEELGEIQLVRIEKRKYGS   94 (691)
T ss_dssp             ----CEEEEEEECCSTTCCBCSEEEEEEEESSCBCCCE-ECCS---SCBCTTCEEEEEECCSSCCCSEEEEEEEEECSSS
T ss_pred             CCceeEEEEEEECCCCCCCCCceeEEEEEECCCceeeE-EecC---CcccCCCeeEEEEEeccCCCCceEEEEEECCCCC
Confidence            57999999999999999999999999999999997664 5876   78999999999999955 59999999999966  


Q ss_pred             -CCceecEEEEecCCCCceeEEecccCCCC
Q 029433          119 -DGWEPESVKIISPNSSPVTYDFNTSAPNE  147 (193)
Q Consensus       119 -dGW~pe~V~V~~~~~~~vtF~~n~~LP~~  147 (193)
                       +||++++|+|.........|..++||-.+
T Consensus        95 ~~~Wfl~~V~V~~~~g~~~~Fpc~rWL~~d  124 (691)
T 3v98_A           95 NDDWYLKYITLKTPHGDYIEFPCYRWITGD  124 (691)
T ss_dssp             CCCEEEEEEEEECTTSCEEEEEEEEEECSS
T ss_pred             CCCeEEeEEEEECCCCcEEEEehHHhcCCC
Confidence             79999999999887778999999999654

>3dy5_A Allene oxide synthase-lipoxygenase protein; fusion protein, BI-functional enzyme, dioxygenase, fatty ACI biosynthesis, heme, iron; HET: HEM; 3.51A {Plexaura homomalla}

Probab=99.51  E-value=2.6e-14  Score=142.69  Aligned_cols=105  Identities=25%  Similarity=0.301  Sum_probs=88.4

Q ss_pred             cCCceEEEEEEecCCCCccCCceeEEEEecCCCCeEEeeCCCCCCCCCccCCcccceeeecCCCccccEEEEEEcCC---
Q 029433           42 FGNCTYLVVIKTSCDSKNFTRDRISIAFGDAYGNQIYAPRLDDPFTKTFQSCSSDGFQIDGPCATDICYVYLHRSGL---  118 (193)
Q Consensus        42 ~~~C~YtV~IkTsC~s~agT~d~ISl~FgDa~Gn~V~~~~Ld~p~~~~FErCs~DtF~v~GpCl~~IC~lyL~r~G~---  118 (193)
                      .+.|.|+|+|+||....|||+++|.|.+...+|..-.+ .|++|+.+.|||+++|+|.++...++++|+|.|.+|++   
T Consensus       371 ~~~~~Y~V~V~TG~~~~AGTda~V~i~L~G~~G~S~~~-~L~~~~~~~FeRGs~d~F~v~~~~LG~L~~IrI~hDnsG~~  449 (1066)
T 3dy5_A          371 GQNAIYNVEVETGDREHAGTDATITIRITGAKGRTDYL-KLDKWFHNDFEAGSKEQYTVQGFDVGDIQLIELHSDGGGYW  449 (1066)
T ss_dssp             --CCEEEEEEEECCSTTCCCCSCCEEEEEESSCBCCCE-EC-------CCTTCEEEEEEECSCCSSEEEEEEECCCCC--
T ss_pred             cCceeEEEEEEECCCCCCCCCceeEEEEEECCCceeeE-EeCCCCcCccccCCcceEEEEEecCCCceEEEEEECCCCCC
Confidence            45799999999999999999999999999999997654 79999989999999999999997789999999999954   


Q ss_pred             ---CCceecEEEEecCC-CCceeEEecccCCCC
Q 029433          119 ---DGWEPESVKIISPN-SSPVTYDFNTSAPNE  147 (193)
Q Consensus       119 ---dGW~pe~V~V~~~~-~~~vtF~~n~~LP~~  147 (193)
                         ++|++++|+|.... .....|..++||-.+
T Consensus       450 ~~~~~Wfl~~V~V~~~~tg~~~~Fpc~rWL~~d  482 (1066)
T 3dy5_A          450 SGDPDWFVNRVIIISSTQDRVYSFPCFRWVIKD  482 (1066)
T ss_dssp             CCCCCEEEEEEEEEESSSSSCEEEEEEEEESSE
T ss_pred             CCCCCeEEeEEEEEeCCCCCEEEEehhhhccCC
Confidence               69999999999876 677899999999765

>3fg1_A Allene oxide synthase-lipoxygenase protein; arichidonic metabolism, dioxygenase, fatty ACI biosynthesis, heme, iron, lipid synthesis, lyase; HET: GOL; 1.85A {Plexaura homomalla} PDB: 3fg4_A* 3fg3_A* 2fnq_A

Probab=99.40  E-value=3.7e-13  Score=129.44  Aligned_cols=99  Identities=24%  Similarity=0.320  Sum_probs=89.3

Q ss_pred             ceEEEEEEecCCCCccCCceeEEEEecCCCCeEEeeCCCCCCCCCccCCcccceeeecCCCccccEEEEEEcCC------
Q 029433           45 CTYLVVIKTSCDSKNFTRDRISIAFGDAYGNQIYAPRLDDPFTKTFQSCSSDGFQIDGPCATDICYVYLHRSGL------  118 (193)
Q Consensus        45 C~YtV~IkTsC~s~agT~d~ISl~FgDa~Gn~V~~~~Ld~p~~~~FErCs~DtF~v~GpCl~~IC~lyL~r~G~------  118 (193)
                      -.|.|+|+||....|||+++|.|.+...+|..-.. .|++   +.|||+++|+|.+++..++++|+|.|.+|++      
T Consensus         7 ~~~~~~V~TG~~~~AGTda~V~I~L~G~~G~S~~~-~L~~---~~FeRGs~d~F~v~~~dLG~L~~IrI~hDnsg~G~~~   82 (696)
T 3fg1_A            7 AIYNVEVETGDREHAGTDATITIRITGAKGRTDYL-KLDK---GSFEAGSKEQYTVQGFDVGDIQLIELHSDGGGYWSGD   82 (696)
T ss_dssp             EEEEEEEEECSSTTCCBCSCEEEEEEETTEECCCE-EECS---SCBCTTCEEEEEEEEECCSSEEEEEEEECCCCTTCSC
T ss_pred             ceeeEEEEeCCCCCCCCCceeEEEEEECCCceeeE-EeCC---CCcCCCCccEEEEEEccCCCceEEEEEECCcCCCCCC
Confidence            47999999999999999999999999999986544 5776   7899999999999997789999999999965      


Q ss_pred             CCceecEEEEecCC-CCceeEEecccCCCC
Q 029433          119 DGWEPESVKIISPN-SSPVTYDFNTSAPNE  147 (193)
Q Consensus       119 dGW~pe~V~V~~~~-~~~vtF~~n~~LP~~  147 (193)
                      ++|++++|+|.... .....|..++||-.+
T Consensus        83 ~~Wf~~~V~V~~~~tg~~~~Fpc~rWL~~d  112 (696)
T 3fg1_A           83 PDWFVNRVIIISSTQDRVYSFPCFRWVIKD  112 (696)
T ss_dssp             CCEEEEEEEEEETTCSSCEEEEEEEEESSE
T ss_pred             CCeEeeEEEEEeCCCCcEEEeEhhhhccCC
Confidence            69999999999886 677999999999765

>3cwz_B RAB6IP1, RAB6-interacting protein 1; RAB small GTPase, RAB-binding domain, guanosine 5' triphosphate, RUN, RPIP8, UNC-14, nesca PLAT; HET: GTP; 3.20A {Mus musculus}

Probab=99.31  E-value=8.3e-12  Score=113.10  Aligned_cols=94  Identities=10%  Similarity=0.039  Sum_probs=83.7

Q ss_pred             cCCceEEEEEEecCCCC-ccCCceeEEEEecCCCCeEEeeCCCCCCCCCccCCcccceeeecCCCccccEEEEEEcCC--
Q 029433           42 FGNCTYLVVIKTSCDSK-NFTRDRISIAFGDAYGNQIYAPRLDDPFTKTFQSCSSDGFQIDGPCATDICYVYLHRSGL--  118 (193)
Q Consensus        42 ~~~C~YtV~IkTsC~s~-agT~d~ISl~FgDa~Gn~V~~~~Ld~p~~~~FErCs~DtF~v~GpCl~~IC~lyL~r~G~--  118 (193)
                      ...|.|+|+|+||.... |||+++|.|.+.+..|..-.+. |+++         .|+|.++..|++++++|.|.+|++  
T Consensus       245 tt~~~Y~V~V~TG~~~gaAGT~anV~I~L~G~~G~S~~~~-L~~~---------~d~F~v~~~~LG~L~~I~I~HDnsG~  314 (384)
T 3cwz_B          245 TILIPYHILIVPSKKLGGSMFTANPWICISGELGETQILQ-IPRN---------VLEMTFECQNLGKLTTVQIGHDNSGL  314 (384)
T ss_dssp             TSEEEEEEEEEECCCCCSCCCCSCEEEEEEESSCBCCCEE-CCTT---------CCEEEEEEECCCSEEEEEEEECCCSS
T ss_pred             ccceeEEEEEEeCCCCCCCCCCCcEEEEEEeCCCCcccEE-eccc---------CceEEEecccCCCceEEEEEECCCCC
Confidence            56899999999999998 6999999999999999986654 7653         689999999999999999999966  


Q ss_pred             -CCceecEEEEecCC-CCceeEEecccCC
Q 029433          119 -DGWEPESVKIISPN-SSPVTYDFNTSAP  145 (193)
Q Consensus       119 -dGW~pe~V~V~~~~-~~~vtF~~n~~LP  145 (193)
                       +||++++|+|.... .....|..++||-
T Consensus       315 ~p~Wfl~~V~V~d~~tg~~~~Fpc~rWL~  343 (384)
T 3cwz_B          315 YAKWLVECVMVRNEVTGHTYKFPCGRWLG  343 (384)
T ss_dssp             CCCEEEEEEEEEETTTCCEEEEEEEEEES
T ss_pred             CCceeEeEEEEEeCCCCcEEEEECceeCC
Confidence             69999999999774 5678999999995

>2wxu_A Phospholipase C; cytolysis, hydrolase, hemolysis, membrane binding, virulence gangrene determinant, C2 domain; 1.80A {Clostridium perfringens} PDB: 2wy6_A 2wxt_A 1qm6_A 1qmd_A 1ca1_A 1gyg_A 1kho_A

Probab=99.10  E-value=7.3e-10  Score=100.50  Aligned_cols=102  Identities=22%  Similarity=0.280  Sum_probs=89.0

Q ss_pred             CceEEEEEEecCCCCccCCceeEEEEecCCCCeEEeeCCCCCCCCCccCCcccceeeec---CCC-ccccEEEEEEcCC-
Q 029433           44 NCTYLVVIKTSCDSKNFTRDRISIAFGDAYGNQIYAPRLDDPFTKTFQSCSSDGFQIDG---PCA-TDICYVYLHRSGL-  118 (193)
Q Consensus        44 ~C~YtV~IkTsC~s~agT~d~ISl~FgDa~Gn~V~~~~Ld~p~~~~FErCs~DtF~v~G---pCl-~~IC~lyL~r~G~-  118 (193)
                      -=.|+|+|+||-.-.|||++.|.|.+-...|..-.-. ||+++ +.|||++.|+|.|.=   +-. ++|=.|-|++... 
T Consensus       255 ~~~y~V~V~Tg~~~~AGT~~~V~~~lvg~~Ges~~~~-LD~~g-ndFe~G~~d~y~v~~~~~~~~lg~l~~v~l~K~~~~  332 (370)
T 2wxu_A          255 VKELVAYISTSGEKDAGTDDYMYFGIKTKDGKTQEWE-MDNPG-NDFMTGSKDTYTFKLKDENLKIDDIQNMWIRKRKYT  332 (370)
T ss_dssp             CCEEEEEEEECCSTTCSCCSEEEEEEEETTCCEEEEE-CCCSS-CTTCTTCEEEEEEECSCTTCCGGGEEEEEEEEECSS
T ss_pred             ceeEEEEEEcCCcccCCCcceEEEEEEcCCCccchhh-hhCcC-CCcCCCCeeeEEEecCCCccCcCceEEEEEEccCCC
Confidence            3479999999999999999999999999999987765 89875 899999999999954   334 7888999988866 


Q ss_pred             ---CCceecEEEEecCCCCceeEEecccCCCC
Q 029433          119 ---DGWEPESVKIISPNSSPVTYDFNTSAPNE  147 (193)
Q Consensus       119 ---dGW~pe~V~V~~~~~~~vtF~~n~~LP~~  147 (193)
                         |.|+|+||+|..++.....|..++||-.+
T Consensus       333 ~~~D~Wfc~~i~V~~p~~~~~~FP~y~Wi~g~  364 (370)
T 2wxu_A          333 AFPDAYKPENIKIIANGKVVVDKDINEWISGN  364 (370)
T ss_dssp             SSCCCBCEEEEEEEETTEEEEEEECCSCBCTT
T ss_pred             CCCccceeeeEEEEcCCCcEEEeccceeeeCC
Confidence               89999999999988766889999998643

>1olp_A Alpha-toxin; zinc phospholipase C, GAS gangrene determinant, membrane binding, calcium binding, hydrolase; 2.5A {Clostridium absonum} SCOP: a.124.1.1 b.12.1.3

Probab=99.03  E-value=1.1e-09  Score=99.27  Aligned_cols=101  Identities=22%  Similarity=0.297  Sum_probs=88.6

Q ss_pred             CceEEEEEEecCCCCccCCceeEEEEecCCCCeEEeeCCCCCCCCCccCCcccceeeec---CCC-ccccEEEEEEcCC-
Q 029433           44 NCTYLVVIKTSCDSKNFTRDRISIAFGDAYGNQIYAPRLDDPFTKTFQSCSSDGFQIDG---PCA-TDICYVYLHRSGL-  118 (193)
Q Consensus        44 ~C~YtV~IkTsC~s~agT~d~ISl~FgDa~Gn~V~~~~Ld~p~~~~FErCs~DtF~v~G---pCl-~~IC~lyL~r~G~-  118 (193)
                      -=.|+|+|+||-.-.|||++.|.|.+-...|..-.-. ||+++ +.|||++.|+|.|.=   +-. ++|=.|-|++... 
T Consensus       255 ~n~y~V~V~Tg~~~~AGT~~~V~~~lvg~~Ges~~~~-LD~~g-ndFe~G~~d~y~v~~~~~~~dlg~l~~v~l~K~~~~  332 (370)
T 1olp_A          255 LNEIVVMIKTADVQDAGTDNYIYFGIETKDGVKEEWA-LDNPG-NDFTRNQEGTYTLKLKNKNTKYSDIKNMWIRDEKLT  332 (370)
T ss_dssp             CSEEEEEEEECSSTTCCCCSEEEEEEEETTCCEEEEE-CCCSS-CCSCTTCEEEEEEECSCSSCCGGGEEEEEEEEECSS
T ss_pred             cceEEEEEEcCCcccCCCcceEEEEEEcCCCccchhh-hhCcC-CccCCCCeeEEEEeccCCcCCcCceEEEEEEcCCCC
Confidence            3479999999999999999999999999999998875 89876 899999999999954   333 6888899988766 


Q ss_pred             ---CCceecEEEEecCCCCceeEEecccCCC
Q 029433          119 ---DGWEPESVKIISPNSSPVTYDFNTSAPN  146 (193)
Q Consensus       119 ---dGW~pe~V~V~~~~~~~vtF~~n~~LP~  146 (193)
                         |.|+|+||+|..++.....|..++||-.
T Consensus       333 ~~~D~Wfc~~i~V~~p~~~~~~FP~y~Wi~g  363 (370)
T 1olp_A          333 VATDGWKPSYVKVIAGDKVRLEKNINEWISG  363 (370)
T ss_dssp             SSCCEECEEEEEEEETTEEEEEEECCSCEET
T ss_pred             CCCccceeeeEEEEcCCCcEEEeccceeeeC
Confidence               8999999999998876688999999853

>1bu8_A Protein (pancreatic lipase related protein 2); hydrolase, lipid degradation; HET: NAG; 1.80A {Rattus norvegicus} SCOP: b.12.1.2 c.69.1.19 PDB: 2oxe_A* 2pvs_A 1eth_A*

Probab=94.80  E-value=0.082  Score=47.39  Aligned_cols=106  Identities=10%  Similarity=0.050  Sum_probs=79.5

Q ss_pred             CceEEEEEEecCCCCccCCceeEEEEecCCCCeEEeeCCCCCCCCCccCCcccceee-ecCCCccccEEEEEEcC-----
Q 029433           44 NCTYLVVIKTSCDSKNFTRDRISIAFGDAYGNQIYAPRLDDPFTKTFQSCSSDGFQI-DGPCATDICYVYLHRSG-----  117 (193)
Q Consensus        44 ~C~YtV~IkTsC~s~agT~d~ISl~FgDa~Gn~V~~~~Ld~p~~~~FErCs~DtF~v-~GpCl~~IC~lyL~r~G-----  117 (193)
                      ...|.|+|.|+-  .++|+..|.|.+....|+.-.. .|.++   .||++++++|-+ ...-+++|=++.|....     
T Consensus       339 ~~~Y~v~V~~~~--~~~t~g~i~v~L~G~~g~s~~~-~l~~~---~~~~g~~~s~li~~~~dlG~l~~v~~~W~~~~~~~  412 (452)
T 1bu8_A          339 RWRYKVSVTLSG--AKKLSGYILVALYGNNGNSKQY-EIFKG---SLKPEARHVRDIDVDINVGEIQKVKFLWNNKVINL  412 (452)
T ss_dssp             CEEEEEEEEEEC--SSCEEEEEEEEEEETTEECCCE-EEEEE---EECTTCEEEEEEEESSCCCSEEEEEEEEEC-----
T ss_pred             ceeeEEEEEEcC--CCceeeEEEEEEEcCCCCcceE-Eeccc---ccCCCCEEEEEEeCCCCCCCceEEEEEEECCCCCC
Confidence            667999999954  6799999999999988875322 23323   599999999998 66688899999866552     


Q ss_pred             -CCCceecEEEEe-cCCCCceeEEecccCCCCCceeeecC
Q 029433          118 -LDGWEPESVKII-SPNSSPVTYDFNTSAPNEDWYGVNLC  155 (193)
Q Consensus       118 -~dGW~pe~V~V~-~~~~~~vtF~~n~~LP~~vwyG~N~C  155 (193)
                       ...|+.+.|+|. +......+|=-+.|+-+++--.+.-|
T Consensus       413 ~~p~~~i~~I~V~~~e~~~~~~FC~~~~~~~~~~~~~~~~  452 (452)
T 1bu8_A          413 FRPTLGASQITVQSGVDGKEYNFCSSDTVREDVLQSLYPC  452 (452)
T ss_dssp             -CCCBEEEEEEEEETTTCCEEEEECCCCBCTTCCEEEEEC
T ss_pred             CCCeEEEEEEEEEeCCCCCeEEecCCCccccCceecccCC
Confidence             369999999997 44555567777777766665555444

>1rp1_A Pancreatic lipase related protein 1; hydrolase, lipid degradation; HET: NAG; 2.10A {Canis lupus familiaris} SCOP: b.12.1.2 c.69.1.19 PDB: 2ppl_A

Probab=94.05  E-value=0.12  Score=46.72  Aligned_cols=105  Identities=10%  Similarity=0.071  Sum_probs=78.5

Q ss_pred             CceEEEEEEecCCCCccCCceeEEEEecCCCCeEEeeCCCCCCCCCccCCcccceee-ecCCCccccEEEEEEcC-----
Q 029433           44 NCTYLVVIKTSCDSKNFTRDRISIAFGDAYGNQIYAPRLDDPFTKTFQSCSSDGFQI-DGPCATDICYVYLHRSG-----  117 (193)
Q Consensus        44 ~C~YtV~IkTsC~s~agT~d~ISl~FgDa~Gn~V~~~~Ld~p~~~~FErCs~DtF~v-~GpCl~~IC~lyL~r~G-----  117 (193)
                      ...|.|+|.|+-   ++|+..|.|++....|+.-.. .|.++   .||+.++++|-+ ...=+++|=++.|....     
T Consensus       338 ~~~Y~VtV~~~~---~~t~g~i~v~L~G~~g~s~~~-~l~~~---~~~~g~t~s~li~~~~dlG~l~~v~~~W~~~~~~~  410 (450)
T 1rp1_A          338 RWRYGVSITLSG---KRATGQAKVALFGSKGNTHQF-NIFKG---ILKPGSTHSNEFDAKLDVGTIEKVKFLWNNNVVNP  410 (450)
T ss_dssp             CEEEEEEEEEEE---SCEEEEEEEEEEETTEECCCE-EEEEE---EECTTCEEEEEEEESSCCSSEEEEEEEEEEC--CT
T ss_pred             cceeEEEEEEcC---CceeEEEEEEEEcCCCCcceE-Eeccc---ccCCCCEEEEEEECCCCCCCceEEEEEEECCCCCC
Confidence            677999999986   899999999999998875322 23333   699999999998 55566788888866552     


Q ss_pred             -CCCceecEEEEe-cCCCCceeEEecccCCCCCceeeecC
Q 029433          118 -LDGWEPESVKII-SPNSSPVTYDFNTSAPNEDWYGVNLC  155 (193)
Q Consensus       118 -~dGW~pe~V~V~-~~~~~~vtF~~n~~LP~~vwyG~N~C  155 (193)
                       ...|+.+.|+|. +...+..+|==+.|+-+++--.+.-|
T Consensus       411 ~~p~~~i~~I~V~~~e~~~~~~FC~~~~~~~~~~~~~~~~  450 (450)
T 1rp1_A          411 TFPKVGAAKITVQKGEEKTVHSFCSESTVREDVLLTLTPC  450 (450)
T ss_dssp             TCCCEEEEEEEEEETTCSSCEEEECSCEECTTCCEEEEEC
T ss_pred             CCCeEEEEEEEEEeCCCCCeEEecCCCccccCceecccCC
Confidence             369999999997 44555567777777766665555444

>1gpl_A RP2 lipase; serine esterase, hydrolase, lipid degradation, pancreas, glycoprotein, chimeric; 2.01A {Cavia porcellus} SCOP: b.12.1.2 c.69.1.19 PDB: 1lpb_B* 1lpa_B* 1n8s_A

Probab=92.97  E-value=0.3  Score=43.14  Aligned_cols=81  Identities=14%  Similarity=0.070  Sum_probs=65.5

Q ss_pred             CceEEEEEEecCCCCccCCceeEEEEecCCCCeEEeeCCCCCCCCCccCCcccceee-ecCCCccccEEEEEEcC-----
Q 029433           44 NCTYLVVIKTSCDSKNFTRDRISIAFGDAYGNQIYAPRLDDPFTKTFQSCSSDGFQI-DGPCATDICYVYLHRSG-----  117 (193)
Q Consensus        44 ~C~YtV~IkTsC~s~agT~d~ISl~FgDa~Gn~V~~~~Ld~p~~~~FErCs~DtF~v-~GpCl~~IC~lyL~r~G-----  117 (193)
                      ...|.|+|.|+-   ++|+..|.|.+....|+.-.+ .|.++   .||++++++|-+ ...-+++|=++.|....     
T Consensus       321 ~~~Y~v~v~~~~---~~~~g~i~v~L~G~~g~s~~~-~l~~~---~~~~g~~~s~li~~~~~lG~l~~v~~~W~~~~~~~  393 (432)
T 1gpl_A          321 RWRYKVSVTLSG---KKVTGHILVSLFGNKGNSKQY-EIFKG---TLKPDSTHSNEFDSDVDVGDLQMVKFIWYNNVINP  393 (432)
T ss_dssp             CEEEEEEEEEEE---CCEEEEEEEEEEESSCEEEEE-EEEEE---EECTTCEEEEEEEESSCCCSEEEEEEEEEESSCCT
T ss_pred             cceeEEEEEEcC---CceeEEEEEEEEcCCCCceeE-Eeccc---ccCCCcEEEEEEeCCCCCCCceEEEEEEEcCCCCC
Confidence            667999999986   799999999999999987443 34433   599999999998 66688899999866552     


Q ss_pred             -CCCceecEEEEecC
Q 029433          118 -LDGWEPESVKIISP  131 (193)
Q Consensus       118 -~dGW~pe~V~V~~~  131 (193)
                       ...|+.+.|+|..-
T Consensus       394 ~~~~~~i~~I~v~~~  408 (432)
T 1gpl_A          394 TLPRVGASKIIVETN  408 (432)
T ss_dssp             TCCEEEEEEEEEECT
T ss_pred             CCCeEEEEEEEEEeC
Confidence             26899999999754

>1hpl_A Lipase; hydrolase(carboxylic esterase); 2.30A {Equus caballus} SCOP: b.12.1.2 c.69.1.19

Probab=92.66  E-value=0.31  Score=44.03  Aligned_cols=83  Identities=12%  Similarity=0.050  Sum_probs=66.0

Q ss_pred             CceEEEEEEecCCCCccCCceeEEEEecCCCCeEEeeCCCCCCCCCccCCcccceee-ecCCCccccEEEEEEcC-----
Q 029433           44 NCTYLVVIKTSCDSKNFTRDRISIAFGDAYGNQIYAPRLDDPFTKTFQSCSSDGFQI-DGPCATDICYVYLHRSG-----  117 (193)
Q Consensus        44 ~C~YtV~IkTsC~s~agT~d~ISl~FgDa~Gn~V~~~~Ld~p~~~~FErCs~DtF~v-~GpCl~~IC~lyL~r~G-----  117 (193)
                      ...|.|+|.|+-   ++|+..|.|.+....|+.-. ..|.++   .||++++++|-+ ...-+++|=++.|....     
T Consensus       338 ~~~Y~VtV~~~~---~~t~g~i~v~L~G~~g~s~~-~~l~~~---~~~~g~~~s~li~~~~dlG~l~~v~~~W~~~~~~~  410 (449)
T 1hpl_A          338 RWRYRVDVTLSG---KKVTGHVLVSLFGNKGNSRQ-YEIFQG---TLKPDNTYSNEFDSDVEVGDLEKVKFIWYNNVINL  410 (449)
T ss_dssp             CEEEEEEEEEEE---CCEEEEEEEEEEETTEECCC-EEEEEE---EECSSCEEEEEEEESSCCCSEEEEEEEEEECSCCT
T ss_pred             cceeEEEEEEcC---CceeEEEEEEEEcCCCCcee-EEeccc---ccCCCcEEEEEEeCCCCCCCceEEEEEEECCCCCC
Confidence            677999999986   89999999999999887632 233333   599999999998 66688899999866552     


Q ss_pred             -CCCceecEEEEecCCCC
Q 029433          118 -LDGWEPESVKIISPNSS  134 (193)
Q Consensus       118 -~dGW~pe~V~V~~~~~~  134 (193)
                       ...|+.+.|+|.. ...
T Consensus       411 ~~p~~~i~~I~V~~-e~~  427 (449)
T 1hpl_A          411 TLPKVGASKITVER-NDG  427 (449)
T ss_dssp             TCCCEEEEEEEEEC-TTS
T ss_pred             CCCeEEEEEEEEEe-CCC
Confidence             3699999999988 443

>1w52_X Pancreatic lipase related protein 2; detergent, cleaved flap; HET: DDQ; 2.99A {Equus caballus}

Probab=92.43  E-value=0.054  Score=48.54  Aligned_cols=105  Identities=10%  Similarity=0.040  Sum_probs=78.1

Q ss_pred             CceEEEEEEecCCCCccCCceeEEEEecCCCCeEEeeCCCCCCCCCccCCcccceee-ecCCCccccEEEEEEcC-----
Q 029433           44 NCTYLVVIKTSCDSKNFTRDRISIAFGDAYGNQIYAPRLDDPFTKTFQSCSSDGFQI-DGPCATDICYVYLHRSG-----  117 (193)
Q Consensus        44 ~C~YtV~IkTsC~s~agT~d~ISl~FgDa~Gn~V~~~~Ld~p~~~~FErCs~DtF~v-~GpCl~~IC~lyL~r~G-----  117 (193)
                      ...|.|+|.|+  ..++|+..|.|++....|+.-. ..|.++   .||++++++|-+ ...-+++|=++.|....     
T Consensus       339 ~~~Y~v~v~~~--~~~~t~g~i~v~L~G~~g~s~~-~~l~~~---~~~~g~~~s~li~~~~dlG~l~~v~~~W~~~~~~~  412 (452)
T 1w52_X          339 SWRYRVSITLA--GSGKANGYLKVTLRGSNGNSKQ-YEIFKG---SLQPDSSYTLDVDVNFIIGKIQEVKFVWNKTVLNL  412 (452)
T ss_dssp             CEEEEECCBCC--SSSCCEECBCCCBCCSSCCCCC-CCCCCE---ECCSSCCCCEEEEESSCCCCCCCBCCCBCCSSCCS
T ss_pred             ceeeEEEEEEc--CCcceeeEEEEEEEcCCCCcce-Eecccc---ccCCCCEEEEEEECCCCCCCceEEEEEEECCCCCC
Confidence            67799999997  4679999999999999998643 245443   699999999998 55677888888755552     


Q ss_pred             -CCCceecEEEEec-CCCCceeEEecccCCCCCceeeec
Q 029433          118 -LDGWEPESVKIIS-PNSSPVTYDFNTSAPNEDWYGVNL  154 (193)
Q Consensus       118 -~dGW~pe~V~V~~-~~~~~vtF~~n~~LP~~vwyG~N~  154 (193)
                       ...|+.+.|+|.. ......+|==+.|+-+++--.+.-
T Consensus       413 ~~~~~~i~~I~V~~~e~~~~~~fC~~~~~~~~~~~~~~~  451 (452)
T 1w52_X          413 SKPQLGASRITVQSGADGTEYKFCGSGTVQDNVEQSLYP  451 (452)
T ss_dssp             CCCCCCCSBCCCCBSSSCCCCCEECCSCCCSSCCCCCEE
T ss_pred             CCCeEEEEEEEEEeCCCCCeEEecCCCccccCceecccC
Confidence             3699999999974 445456677777776665444433

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	193
d2p0ma2	111	b.12.1.1 (A:2-112) 15-Lipoxygenase {Rabbit (Orycto	0.001

>d2p0ma2 b.12.1.1 (A:2-112) 15-Lipoxygenase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 111

class: All beta proteins
fold: Lipase/lipooxygenase domain (PLAT/LH2 domain)
superfamily: Lipase/lipooxygenase domain (PLAT/LH2 domain)
family: Lipoxigenase N-terminal domain
domain: 15-Lipoxygenase
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 35.4 bits (81), Expect = 0.001
 Identities = 14/107 (13%), Positives = 35/107 (32%), Gaps = 14/107 (13%)

Query: 47  YLVVIKTSCDSKNFTRDRISIAFGDAYGNQIYAPRLDDPFTKTFQSCSSDGFQIDGPCAT 106
           Y V + T       +++++ +     +G            T+       + F+++     
Sbjct: 3   YRVCVSTGASIYAGSKNKVELWLVGQHGEVE--LGSCLRPTRN----KEEEFKVNVSKYL 56

Query: 107 -DICYVYLHRSGL---DGWEPESVKIISPNSSPVTYDFNTSAPNEDW 149
             + +V L +      D W    + + +  ++   Y F    P   W
Sbjct: 57  GSLLFVRLRKKHFLKEDAWFCNWISVQALGAAEDKYWF----PCYRW 99

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	193
d1ca1a2	121	Alpha-toxin, C-terminal domain {Clostridium perfri	99.68
d1olpa2	121	Alpha-toxin, C-terminal domain {Clostridium absonu	99.64
d2p0ma2	111	15-Lipoxygenase {Rabbit (Oryctolagus cuniculus) [T	99.57
d1bu8a1	114	Pancreatic lipase, C-terminal domain {Rat (Rattus	98.73
d1rp1a1	113	Pancreatic lipase, C-terminal domain {Dog (Canis f	98.7
d1gpla1	112	Pancreatic lipase, C-terminal domain {Guinea pig (	98.19

>d1ca1a2 b.12.1.3 (A:250-370) Alpha-toxin, C-terminal domain {Clostridium perfringens, different strains [TaxId: 1502]}

class: All beta proteins
fold: Lipase/lipooxygenase domain (PLAT/LH2 domain)
superfamily: Lipase/lipooxygenase domain (PLAT/LH2 domain)
family: Alpha-toxin, C-terminal domain
domain: Alpha-toxin, C-terminal domain
species: Clostridium perfringens, different strains [TaxId: 1502]

Probab=99.68  E-value=1.7e-16  Score=120.39  Aligned_cols=104  Identities=21%  Similarity=0.291  Sum_probs=91.4

Q ss_pred             ceEEEEEEecCCCCccCCceeEEEEecCCCCeEEeeCCCCCCCCCccCCcccceeeecCC----CccccEEEEEEcCC--
Q 029433           45 CTYLVVIKTSCDSKNFTRDRISIAFGDAYGNQIYAPRLDDPFTKTFQSCSSDGFQIDGPC----ATDICYVYLHRSGL--  118 (193)
Q Consensus        45 C~YtV~IkTsC~s~agT~d~ISl~FgDa~Gn~V~~~~Ld~p~~~~FErCs~DtF~v~GpC----l~~IC~lyL~r~G~--  118 (193)
                      =.|+|+|+||-...|||+++|.|.+....|+.-.. .|++|+ +.|||+++|+|.+..+.    ++.|.+|.|.+++.  
T Consensus         7 ~~~~v~V~TG~~~~AGTda~V~i~l~G~~G~s~~~-~L~~~~-~~Ferg~~d~F~v~~~d~~~~lG~i~ki~i~hd~~g~   84 (121)
T d1ca1a2           7 KELVAYISTSGEKDAGTDDYMYFGIKTKDGKTQEW-EMDNPG-NDFMTGSKDTYTFKLKDENLKIDDIQNMWIRKRKYTA   84 (121)
T ss_dssp             CEEEEEEEECCSTTCCCCSEEEEEEEETTSCEEEE-ECCCSS-SCSCTTCEEEEEEECSCSSCCGGGEEEEEEEEECSSS
T ss_pred             eeEEEEEEeCCCCCCCCCCeEEEEEEeCCCCeeeE-EecCCC-ccccCCcEEEEEEEeCCcCCCcCCceEEEEEEcCccc
Confidence            36999999999999999999999999999987765 788875 67999999999999876    78999999999854  


Q ss_pred             --CCceecEEEEecCCCCceeEEecccCCCCCce
Q 029433          119 --DGWEPESVKIISPNSSPVTYDFNTSAPNEDWY  150 (193)
Q Consensus       119 --dGW~pe~V~V~~~~~~~vtF~~n~~LP~~vwy  150 (193)
                        ++|++++|+|.........|.+|+||-.+-.|
T Consensus        85 ~~~~W~l~~V~v~~~~~~~~~F~~nrWl~~~~~~  118 (121)
T d1ca1a2          85 FPDAYKPENIKVIANGKVVVDKDINEWISGNSTY  118 (121)
T ss_dssp             SCCCBCEEEEEEEETTEEEEEEECCSCBCSSCEE
T ss_pred             cCchhheEEEEEECCCCeEEEeECCEEECCCCEE
Confidence              57999999998666667899999999866554

>d1olpa2 b.12.1.3 (A:250-370) Alpha-toxin, C-terminal domain {Clostridium absonum [TaxId: 29369]}

class: All beta proteins
fold: Lipase/lipooxygenase domain (PLAT/LH2 domain)
superfamily: Lipase/lipooxygenase domain (PLAT/LH2 domain)
family: Alpha-toxin, C-terminal domain
domain: Alpha-toxin, C-terminal domain
species: Clostridium absonum [TaxId: 29369]

Probab=99.64  E-value=4.2e-16  Score=118.01  Aligned_cols=103  Identities=21%  Similarity=0.299  Sum_probs=89.5

Q ss_pred             eEEEEEEecCCCCccCCceeEEEEecCCCCeEEeeCCCCCCCCCccCCcccceeeecCC----CccccEEEEEEcC--C-
Q 029433           46 TYLVVIKTSCDSKNFTRDRISIAFGDAYGNQIYAPRLDDPFTKTFQSCSSDGFQIDGPC----ATDICYVYLHRSG--L-  118 (193)
Q Consensus        46 ~YtV~IkTsC~s~agT~d~ISl~FgDa~Gn~V~~~~Ld~p~~~~FErCs~DtF~v~GpC----l~~IC~lyL~r~G--~-  118 (193)
                      .|.|+|+||....|||+++|.|.+....|+.-.+ .|+.++ +.|||+++|+|.+..+-    ++.|.+|.|.+++  . 
T Consensus         8 ~~~V~v~Tg~~~~AGT~a~V~i~l~G~~g~s~~~-~L~~~~-~~Ferg~~d~F~v~~~d~~~~lG~i~~i~i~hd~~g~~   85 (121)
T d1olpa2           8 EIVVMIKTADVQDAGTDNYIYFGIETKDGVKEEW-ALDNPG-NDFTRNQEGTYTLKLKNKNTKYSDIKNMWIRDEKLTVA   85 (121)
T ss_dssp             EEEEEEEECSSTTCCCCSEEEEEEEETTCCEEEE-ECCCSS-CCSCTTCEEEEEEECSCSSCCGGGEEEEEEEEECSSSS
T ss_pred             EEEEEEEECCCCCCCCcceEEEEEEECCCCcccE-EecCCC-cccccCCeEEEEEEeCCccCCcCceEEEEEEEcCCCCC
Confidence            6999999999999999999999999999987776 588875 78999999999998775    6899999999983  2 


Q ss_pred             -CCceecEEEEecCCCCceeEEecccCCCCCce
Q 029433          119 -DGWEPESVKIISPNSSPVTYDFNTSAPNEDWY  150 (193)
Q Consensus       119 -dGW~pe~V~V~~~~~~~vtF~~n~~LP~~vwy  150 (193)
                       ++|++++|+|.........|.+|+||-.+-.|
T Consensus        86 ~~~W~l~~V~v~~~~~~~~~F~~nrWl~~~~~~  118 (121)
T d1olpa2          86 TDGWKPSYVKVIAGDKVRLEKNINEWISGGTTY  118 (121)
T ss_dssp             CCEECEEEEEEEETTEEEEEEECCSCEETTEEE
T ss_pred             CcceeEEEEEEECCCCeEEEEECCEEECCCcEE
Confidence             57999999997665567899999999765544

>d2p0ma2 b.12.1.1 (A:2-112) 15-Lipoxygenase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: All beta proteins
fold: Lipase/lipooxygenase domain (PLAT/LH2 domain)
superfamily: Lipase/lipooxygenase domain (PLAT/LH2 domain)
family: Lipoxigenase N-terminal domain
domain: 15-Lipoxygenase
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.57  E-value=9.6e-15  Score=108.21  Aligned_cols=94  Identities=10%  Similarity=0.139  Sum_probs=83.0

Q ss_pred             eEEEEEEecCCCCccCCceeEEEEecCCCCeEEeeCCCCCCCCCccCCcccceeeecCC-CccccEEEEEEcCC---CCc
Q 029433           46 TYLVVIKTSCDSKNFTRDRISIAFGDAYGNQIYAPRLDDPFTKTFQSCSSDGFQIDGPC-ATDICYVYLHRSGL---DGW  121 (193)
Q Consensus        46 ~YtV~IkTsC~s~agT~d~ISl~FgDa~Gn~V~~~~Ld~p~~~~FErCs~DtF~v~GpC-l~~IC~lyL~r~G~---dGW  121 (193)
                      .|+|+|+||-...|||+++|.|.+.+..|..-.. .|     +.|||.++|+|.+..+. +++|.+|.|.+++.   ++|
T Consensus         2 ~Y~I~v~TG~~~~AGT~a~V~i~l~G~~G~s~~~-~l-----~~f~rg~~d~F~~~~~~~lG~i~~i~i~~d~~g~~~~W   75 (111)
T d2p0ma2           2 VYRVCVSTGASIYAGSKNKVELWLVGQHGEVELG-SC-----LRPTRNKEEEFKVNVSKYLGSLLFVRLRKKHFLKEDAW   75 (111)
T ss_dssp             EEEEEEEECSSSSCCCSSEEEEEEEESSCEEEEE-EE-----ECCCTTCEEEEEEECSSCCCSEEEEEEEEECSSSCCCE
T ss_pred             eEEEEEEECCCCCCCCCCeEEEEEEECCCCCCCc-Cc-----cccccCcEEEEEEEeeccccceEEEEEEECCCCCCCCe
Confidence            5999999999999999999999999999987654 34     34999999999999885 79999999999975   699


Q ss_pred             eecEEEEecC--CCCceeEEecccCC
Q 029433          122 EPESVKIISP--NSSPVTYDFNTSAP  145 (193)
Q Consensus       122 ~pe~V~V~~~--~~~~vtF~~n~~LP  145 (193)
                      ++++|+|...  ......|-+++||-
T Consensus        76 ~l~~V~V~~~~~~~~~~~Fpc~~Wl~  101 (111)
T d2p0ma2          76 FCNWISVQALGAAEDKYWFPCYRWVV  101 (111)
T ss_dssp             EEEEEEEEESSSSCCCEEEEEEEEEC
T ss_pred             EEEEEEEEecCCCCeEEEEEcCceEC
Confidence            9999999865  34568899999995

>d1bu8a1 b.12.1.2 (A:337-449) Pancreatic lipase, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Lipase/lipooxygenase domain (PLAT/LH2 domain)
superfamily: Lipase/lipooxygenase domain (PLAT/LH2 domain)
family: Colipase-binding domain
domain: Pancreatic lipase, C-terminal domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.73  E-value=1.7e-08  Score=74.33  Aligned_cols=100  Identities=12%  Similarity=0.023  Sum_probs=78.7

Q ss_pred             eEEEEEEecCCCCccCCceeEEEEecCCCCeEEeeCCCCCCCCCccCCcccceeeecC-CCccccEEEEEEcCC---CCc
Q 029433           46 TYLVVIKTSCDSKNFTRDRISIAFGDAYGNQIYAPRLDDPFTKTFQSCSSDGFQIDGP-CATDICYVYLHRSGL---DGW  121 (193)
Q Consensus        46 ~YtV~IkTsC~s~agT~d~ISl~FgDa~Gn~V~~~~Ld~p~~~~FErCs~DtF~v~Gp-Cl~~IC~lyL~r~G~---dGW  121 (193)
                      .|+|+|+||-  .++|+++|.|.+....|+.=.+ .|.   .+.|||+++|+|.+..+ -++++=++.+.+|++   ++|
T Consensus         3 rY~V~V~t~~--~~gT~~~V~i~L~G~~G~s~~~-~l~---~~~f~rG~~~~f~~~~~~~lG~l~~i~i~hdn~g~~~~W   76 (114)
T d1bu8a1           3 RYKVSVTLSG--AKKLSGYILVALYGNNGNSKQY-EIF---KGSLKPEARHVRDIDVDINVGEIQKVKFLWNNKVINLFR   76 (114)
T ss_dssp             EEEEEEEEEC--SSCEEEEEEEEEEETTEECCCE-EEE---EEEECTTCEEEEEEEESSCCCSEEEEEEEEEC------C
T ss_pred             EEEEEEEECC--CCCcCceEEEEEEeCCCCcccC-ccc---hhhccCCCceEEEEecCcCCCCcEEEEEEECCCcCCCcc
Confidence            5999999984  4799999999999999974222 232   25699999999999985 899999999999965   588


Q ss_pred             ---eecEEEEecC-CCCceeEEecccCCCCCcee
Q 029433          122 ---EPESVKIISP-NSSPVTYDFNTSAPNEDWYG  151 (193)
Q Consensus       122 ---~pe~V~V~~~-~~~~vtF~~n~~LP~~vwyG  151 (193)
                         +.+.|+|... .....+|=.+.|+.+++-..
T Consensus        77 ~~~~l~~V~V~~~~~g~~~~Fc~~~~v~~~~~~~  110 (114)
T d1bu8a1          77 PTLGASQITVQSGVDGKEYNFCSSDTVREDVLQS  110 (114)
T ss_dssp             CCBEEEEEEEEETTTCCEEEEECCCCBCTTCCEE
T ss_pred             cccceEEEEEEeCCCCCEEEEecCceEcCCceee
Confidence               5899999865 45667777888998776544

>d1rp1a1 b.12.1.2 (A:337-449) Pancreatic lipase, C-terminal domain {Dog (Canis familiaris) [TaxId: 9615]}

class: All beta proteins
fold: Lipase/lipooxygenase domain (PLAT/LH2 domain)
superfamily: Lipase/lipooxygenase domain (PLAT/LH2 domain)
family: Colipase-binding domain
domain: Pancreatic lipase, C-terminal domain
species: Dog (Canis familiaris) [TaxId: 9615]

Probab=98.70  E-value=1.3e-08  Score=75.04  Aligned_cols=103  Identities=12%  Similarity=0.099  Sum_probs=81.4

Q ss_pred             eEEEEEEecCCCCccCCceeEEEEecCCCCeEEeeCCCCCCCCCccCCcccceeeec-CCCccccEEEEEEcCC---CCc
Q 029433           46 TYLVVIKTSCDSKNFTRDRISIAFGDAYGNQIYAPRLDDPFTKTFQSCSSDGFQIDG-PCATDICYVYLHRSGL---DGW  121 (193)
Q Consensus        46 ~YtV~IkTsC~s~agT~d~ISl~FgDa~Gn~V~~~~Ld~p~~~~FErCs~DtF~v~G-pCl~~IC~lyL~r~G~---dGW  121 (193)
                      .|.|.|+||   .|+|+++|.|.+....|+.=.+ .|.   .+.|||+++|+|.+.. ..++++=++.+.+|.+   ++|
T Consensus         3 rY~V~V~t~---gagT~a~v~i~L~G~~g~t~~~-~l~---~~~f~~g~~~~f~i~~~~~lG~l~~v~i~hdn~g~~~~w   75 (113)
T d1rp1a1           3 RYGVSITLS---GKRATGQAKVALFGSKGNTHQF-NIF---KGILKPGSTHSNEFDAKLDVGTIEKVKFLWNNNVVNPTF   75 (113)
T ss_dssp             EEEEEEEEE---ESCEEEEEEEEEEETTEECCCE-EEE---EEEECTTCEEEEEEEESSCCSSEEEEEEEEEEC--CTTC
T ss_pred             EEEEEEEEC---CCCccceEEEEEEcCCCCcccE-EEc---ceeEcCCCEEEEEEEeCCCCCCcEEEEEEECCCCCCCcc
Confidence            599999998   5899999999999999874322 332   2469999999999986 5999999999999854   588


Q ss_pred             ---eecEEEEecC-CCCceeEEecccCCCCCceeeecC
Q 029433          122 ---EPESVKIISP-NSSPVTYDFNTSAPNEDWYGVNLC  155 (193)
Q Consensus       122 ---~pe~V~V~~~-~~~~vtF~~n~~LP~~vwyG~N~C  155 (193)
                         +.+.|+|... .....+|=-+.|+.+++-..-.-|
T Consensus        76 ~~~~v~~V~V~~~~~g~~~~Fc~~~~v~~~v~~~l~pc  113 (113)
T d1rp1a1          76 PKVGAAKITVQKGEEKTVHSFCSESTVREDVLLTLTPC  113 (113)
T ss_dssp             CCEEEEEEEEEETTCSSC-EEECSCEECTTCCEEEEEC
T ss_pred             ccceeEEEEEEcCCCCcEEEECcCceEccCceeccccC
Confidence               9999999754 566788878889888776544333

>d1gpla1 b.12.1.2 (A:337-449) Pancreatic lipase, C-terminal domain {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: All beta proteins
fold: Lipase/lipooxygenase domain (PLAT/LH2 domain)
superfamily: Lipase/lipooxygenase domain (PLAT/LH2 domain)
family: Colipase-binding domain
domain: Pancreatic lipase, C-terminal domain
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=98.19  E-value=1.6e-06  Score=64.11  Aligned_cols=81  Identities=14%  Similarity=0.068  Sum_probs=66.9

Q ss_pred             eEEEEEEecCCCCccCCceeEEEEecCCCCeEEeeCCCCCCCCCccCCcccceeeecC-CCccccEEEEEEcCC---CCc
Q 029433           46 TYLVVIKTSCDSKNFTRDRISIAFGDAYGNQIYAPRLDDPFTKTFQSCSSDGFQIDGP-CATDICYVYLHRSGL---DGW  121 (193)
Q Consensus        46 ~YtV~IkTsC~s~agT~d~ISl~FgDa~Gn~V~~~~Ld~p~~~~FErCs~DtF~v~Gp-Cl~~IC~lyL~r~G~---dGW  121 (193)
                      .|.|.|+||   .++|+++|.|.+....|+.=. ..|.++   .|||+++|+|.+.-| .++++-++.+.++-+   ++|
T Consensus         3 rY~V~V~t~---g~~T~~~V~i~L~G~~G~s~~-~~L~~~---~f~~g~t~tf~i~~~~~lG~l~~v~~~hdnsg~~~~w   75 (112)
T d1gpla1           3 RYKVSVTLS---GKKVTGHILVSLFGNKGNSKQ-YEIFKG---TLKPDSTHSNEFDSDVDVGDLQMVKFIWYNNVINPTL   75 (112)
T ss_dssp             EEEEEEEEE---ECCEEEEEEEEEEESSCEEEE-EEEEEE---EECTTCEEEEEEEESSCCCSEEEEEEEEEESSCCTTC
T ss_pred             EEEEEEEEc---CCCccceEEEEEEECCCCccc-EEEcCc---cccCCCEEEEEEEeCCCCCCcEEEEEEECCCCCCCCc
Confidence            599999997   468999999999999997643 345433   599999999999886 899999999999943   699


Q ss_pred             e---ecEEEEecCCC
Q 029433          122 E---PESVKIISPNS  133 (193)
Q Consensus       122 ~---pe~V~V~~~~~  133 (193)
                      .   .+.|+|.....
T Consensus        76 ~~~~~~~I~V~~g~g   90 (112)
T d1gpla1          76 PRVGASKIIVETNVG   90 (112)
T ss_dssp             CEEEEEEEEEECTTS
T ss_pred             ccccCEEEEEECCCC
Confidence            8   78888875433