Citrus Sinensis ID: 029435

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190---
MAPCGEKSQEAISSVVIIIAMQTEAMPLVNKFELKEDQDSVFPEGVPWVRYHGTYKDLHLNIIWPGKDTSLEVDSVGTISASLVTYASIQALKPDLIINAGTAGGFKAKGASIGDVFLISDVAFHDRRIPIPVFDLYGVGQRQAFSTPNLLRELNLKVCKLSTGDSLDMSSQDETSITANDATIKDMEVRAEF
cccccccccccccEEEEEEccHHHHHHHHHHHcccccccccccccccEEEEEEEEccEEEEEEEcccEEEEEEccccHHHHHHHHHHHHHHccccEEEEEcccccccccccccccEEEEcccEEEccccccccccccccccccccccHHHHHHccccEEEEEccccccccHHHHHHHHHccccEEEccccccc
cccccccccccHHHEEEEEEHHHHHHHHHHHccccccccccccccccEEEEEEEEcccEEEEEEcccccccccccccHHHHHHHHHHHHHHccccEEEEccccccHHHccccEcEEEEEccccccccccccccccccccccccccccHHHHHHHcccEEEEEccccccccHHHHHHHHHccccHHHHHHHHcc
MAPCGEKSQEAISSVVIIIAMQTeamplvnkfelkedqdsvfpegvpwvryhgtykdlhlniiwpgkdtslevdsvGTISASLVTYASIQalkpdliinagtaggfkakgasigdvflisdvafhdrripipvfdlygvgqrqafstpnllRELNLKVcklstgdsldmssqdetsitandatiKDMEVRAEF
MAPCGEKSQEAISSVVIIIAMQTEAMPLVNKFELKEDQDSVFPEGVPWVRYHGTYKDLHLNIIWPGKDTSLEVDSVGTISASLVTYASIQALKPDLIINAGTAGGFKAKGASIGDVFLISDVAFHDRRIPIPVFDLYGVGQRQAFSTPNLLRELNLKVCKLStgdsldmssqdetsitandatikDMEVRAEF
MAPCGEKSQEAISSVVIIIAMQTEAMPLVNKFELKEDQDSVFPEGVPWVRYHGTYKDLHLNIIWPGKDTSLEVDSVGTISASLVTYASIQALKPDLIINagtaggfkakgaSIGDVFLISDVAFHDRRIPIPVFDLYGVGQRQAFSTPNLLRELNLKVCKLSTGDSLDMSSQDETSITANDATIKDMEVRAEF
***********ISSVVIIIAMQTEAMPLVNKFELKEDQDSVFPEGVPWVRYHGTYKDLHLNIIWPGKDTSLEVDSVGTISASLVTYASIQALKPDLIINAGTAGGFKAKGASIGDVFLISDVAFHDRRIPIPVFDLYGVGQRQAFSTPNLLRELNLKVCKL********************************
***************VIIIAMQTEAMPLVNKFELKEDQDSVFPEGVPWVRYHGTYKDLHLNIIWPGKDTSLEVDSVGTISASLVTYASIQALKPDLIINAGTAGGFKAKGASIGDVFLISDVAFHDRRIPIPVFDLYGVGQRQAFSTPNLLRELNLKVCKLSTGDSLDMSSQDETSITANDATIKDMEVRAEF
**********AISSVVIIIAMQTEAMPLVNKFELKEDQDSVFPEGVPWVRYHGTYKDLHLNIIWPGKDTSLEVDSVGTISASLVTYASIQALKPDLIINAGTAGGFKAKGASIGDVFLISDVAFHDRRIPIPVFDLYGVGQRQAFSTPNLLRELNLKVCKLSTGDSLDMSSQDETSITANDATIKDMEVRAEF
*********EAISSVVIIIAMQTEAMPLVNKFELKEDQDSVFPEGVPWVRYHGTYKDLHLNIIWPGKDTSLEVDSVGTISASLVTYASIQALKPDLIINAGTAGGFKAKGASIGDVFLISDVAFHDRRIPIPVFDLYGVGQRQAFSTPNLLRELNLKVCKLSTGDSLDMSSQDETSITANDATIKDMEVR***
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MAPCGEKSQEAISSVVIIIAMQTEAMPLVNKFELKEDQDSVFPEGVPWVRYHGTYKDLHLNIIWPGKDTSLEVDSVGTISASLVTYASIQALKPDLIINAGTAGGFKAKGASIGDVFLISDVAFHDRRIPIPVFDLYGVGQRQAFSTPNLLRELNLKVCKLSTGDSLDMSSQDETSITANDATIKDMEVRAEF
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query193 2.2.26 [Sep-21-2011]
Q9T0I8267 5'-methylthioadenosine/S- yes no 0.917 0.662 0.740 1e-75
Q7XA67254 5'-methylthioadenosine/S- no no 0.953 0.724 0.646 4e-69
C4L559233 5'-methylthioadenosine/S- yes no 0.502 0.416 0.357 6e-07
A5UCP4229 5'-methylthioadenosine/S- yes no 0.310 0.262 0.426 1e-06
A0KZQ7236 5'-methylthioadenosine/S- yes no 0.523 0.427 0.315 2e-06
P45113229 5'-methylthioadenosine/S- yes no 0.310 0.262 0.409 2e-06
A5UIX8229 5'-methylthioadenosine/S- yes no 0.310 0.262 0.409 2e-06
Q4QL83230 5'-methylthioadenosine/S- yes no 0.310 0.260 0.409 2e-06
B0TIS5230 5'-methylthioadenosine/S- yes no 0.611 0.513 0.308 4e-06
A0KIZ1230 5'-methylthioadenosine/S- yes no 0.373 0.313 0.381 4e-06
>sp|Q9T0I8|MTN1_ARATH 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1 OS=Arabidopsis thaliana GN=MTN1 PE=1 SV=1 Back     alignment and function desciption
 Score =  282 bits (721), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 131/177 (74%), Positives = 154/177 (87%)

Query: 12  ISSVVIIIAMQTEAMPLVNKFELKEDQDSVFPEGVPWVRYHGTYKDLHLNIIWPGKDTSL 71
           ISSVV +IAMQ EA+PLVNKF L E  DS   +G+PWV YHG +KDL +N++ PG+D +L
Sbjct: 26  ISSVVFVIAMQAEALPLVNKFGLSETTDSPLGKGLPWVLYHGVHKDLRINVVCPGRDAAL 85

Query: 72  EVDSVGTISASLVTYASIQALKPDLIINAGTAGGFKAKGASIGDVFLISDVAFHDRRIPI 131
            +DSVGT+ ASL+T+ASIQALKPD+IINAGT GGFK KGA+IGDVFL+SDV FHDRRIPI
Sbjct: 86  GIDSVGTVPASLITFASIQALKPDIIINAGTCGGFKVKGANIGDVFLVSDVVFHDRRIPI 145

Query: 132 PVFDLYGVGQRQAFSTPNLLRELNLKVCKLSTGDSLDMSSQDETSITANDATIKDME 188
           P+FDLYGVG RQAFSTPNLL+ELNLK+ +LSTGDSLDMS+QDET I ANDAT+KDME
Sbjct: 146 PMFDLYGVGLRQAFSTPNLLKELNLKIGRLSTGDSLDMSTQDETLIIANDATLKDME 202
Enzyme of the methionine cycle that catalyzes the irreversible cleavage of the glycosidic bond in 5'-methylthioadenosine (MTA) to adenine and 5'-methylthioribose. Contributes to the maintenance of AdoMet homeostasis and is required to sustain high rates of ethylene synthesis. Inactive towards S-adenosylhomocysteine (SAH/AdoHcy).
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 2EC: .EC: 2EC: .EC: 9
>sp|Q7XA67|MTN2_ARATH 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2 OS=Arabidopsis thaliana GN=MTN2 PE=1 SV=1 Back     alignment and function description
>sp|C4L559|MTNN_EXISA 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase OS=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) GN=mtnN PE=3 SV=1 Back     alignment and function description
>sp|A5UCP4|MTNN_HAEIE 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase OS=Haemophilus influenzae (strain PittEE) GN=mtnN PE=3 SV=1 Back     alignment and function description
>sp|A0KZQ7|MTNN_SHESA 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase OS=Shewanella sp. (strain ANA-3) GN=mtnN PE=3 SV=1 Back     alignment and function description
>sp|P45113|MTNN_HAEIN 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=mtnN PE=3 SV=1 Back     alignment and function description
>sp|A5UIX8|MTNN_HAEIG 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase OS=Haemophilus influenzae (strain PittGG) GN=mtnN PE=3 SV=1 Back     alignment and function description
>sp|Q4QL83|MTNN_HAEI8 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase OS=Haemophilus influenzae (strain 86-028NP) GN=mtnN PE=3 SV=1 Back     alignment and function description
>sp|B0TIS5|MTNN_SHEHH 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase OS=Shewanella halifaxensis (strain HAW-EB4) GN=mtnN PE=3 SV=1 Back     alignment and function description
>sp|A0KIZ1|MTNN_AERHH 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=mtnN PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query193
255576741266 mta/sah nucleosidase, putative [Ricinus 0.974 0.706 0.781 4e-86
224078057263 predicted protein [Populus trichocarpa] 0.974 0.714 0.782 5e-86
224105257263 predicted protein [Populus trichocarpa] 0.974 0.714 0.782 6e-86
206748343253 5'-methylthioadenosine nucleosidase [Lup 0.974 0.743 0.760 6e-82
356508039265 PREDICTED: 5'-methylthioadenosine/S-aden 0.974 0.709 0.71 5e-80
357467479261 5'-methylthioadenosine/S-adenosylhomocys 0.968 0.716 0.755 6e-80
448872668283 5'-methylthioadenosine/s-adenosylhomocys 0.953 0.650 0.768 6e-80
388510676259 unknown [Lotus japonicus] 0.968 0.722 0.729 9e-80
363808346266 uncharacterized protein LOC100779419 [Gl 0.974 0.706 0.701 4e-79
359475059265 PREDICTED: 5'-methylthioadenosine/S-aden 0.932 0.679 0.761 1e-77
>gi|255576741|ref|XP_002529258.1| mta/sah nucleosidase, putative [Ricinus communis] gi|223531294|gb|EEF33136.1| mta/sah nucleosidase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  322 bits (826), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 157/201 (78%), Positives = 173/201 (86%), Gaps = 13/201 (6%)

Query: 1   MAPCGEKS-------------QEAISSVVIIIAMQTEAMPLVNKFELKEDQDSVFPEGVP 47
           MAP GE S             Q  IS+V+IIIAMQTEAMPLVNKF+L+E+  S FPEGVP
Sbjct: 1   MAPQGEGSDAAGEAMVLEVEQQRPISTVLIIIAMQTEAMPLVNKFQLQEEPHSAFPEGVP 60

Query: 48  WVRYHGTYKDLHLNIIWPGKDTSLEVDSVGTISASLVTYASIQALKPDLIINAGTAGGFK 107
           WVRYHG YKDLH+NI+WPGKD++L VDSVGTISASLVTYASIQAL+PDLIINAGT+GGFK
Sbjct: 61  WVRYHGIYKDLHINIVWPGKDSTLGVDSVGTISASLVTYASIQALQPDLIINAGTSGGFK 120

Query: 108 AKGASIGDVFLISDVAFHDRRIPIPVFDLYGVGQRQAFSTPNLLRELNLKVCKLSTGDSL 167
           AKGASIGDV+L+SDVAFHDRRIPIPVFDLYGVG RQA STPNLL+ELNLKV KLSTGDSL
Sbjct: 121 AKGASIGDVYLVSDVAFHDRRIPIPVFDLYGVGLRQACSTPNLLKELNLKVGKLSTGDSL 180

Query: 168 DMSSQDETSITANDATIKDME 188
           DMS+QDE SI ANDA +KDME
Sbjct: 181 DMSAQDEASIIANDAVVKDME 201

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224078057|ref|XP_002305481.1| predicted protein [Populus trichocarpa] gi|118481001|gb|ABK92454.1| unknown [Populus trichocarpa] gi|222848445|gb|EEE85992.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224105257|ref|XP_002313743.1| predicted protein [Populus trichocarpa] gi|222850151|gb|EEE87698.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|206748343|gb|ACI22358.1| 5'-methylthioadenosine nucleosidase [Lupinus luteus] gi|216360974|gb|ACJ72491.1| 5'-methylthioadenosine nucleosidase [Lupinus luteus] Back     alignment and taxonomy information
>gi|356508039|ref|XP_003522770.1| PREDICTED: 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1-like [Glycine max] Back     alignment and taxonomy information
>gi|357467479|ref|XP_003604024.1| 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [Medicago truncatula] gi|355493072|gb|AES74275.1| 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [Medicago truncatula] gi|388498734|gb|AFK37433.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|448872668|gb|AGE46019.1| 5'-methylthioadenosine/s-adenosylhomocysteine nucleosidase 1-like protein [Elaeis guineensis] Back     alignment and taxonomy information
>gi|388510676|gb|AFK43404.1| unknown [Lotus japonicus] Back     alignment and taxonomy information
>gi|363808346|ref|NP_001242507.1| uncharacterized protein LOC100779419 [Glycine max] gi|255641117|gb|ACU20837.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|359475059|ref|XP_003631578.1| PREDICTED: 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1 isoform 2 [Vitis vinifera] gi|297744678|emb|CBI37940.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query193
TAIR|locus:2141806267 MTN1 "methylthioadenosine nucl 0.917 0.662 0.683 4.8e-62
TAIR|locus:2116925254 MTN2 [Arabidopsis thaliana (ta 0.953 0.724 0.581 1.8e-55
TAIR|locus:2141806 MTN1 "methylthioadenosine nucleosidase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 634 (228.2 bits), Expect = 4.8e-62, P = 4.8e-62
 Identities = 121/177 (68%), Positives = 144/177 (81%)

Query:    12 ISSVVIIIAMQTEAMPLVNKFELKEDQDSVFPEGVPWVRYHGTYKDLHLNIIWPGKDTSL 71
             ISSVV +IAMQ EA+PLVNKF L E  DS   +G+PWV YHG +KDL +N++ PG+D +L
Sbjct:    26 ISSVVFVIAMQAEALPLVNKFGLSETTDSPLGKGLPWVLYHGVHKDLRINVVCPGRDAAL 85

Query:    72 EVDSVGTISASLVTYASIQALKPDLIINXXXXXXXXXXXXSIGDVFLISDVAFHDRRIPI 131
              +DSVGT+ ASL+T+ASIQALKPD+IIN            +IGDVFL+SDV FHDRRIPI
Sbjct:    86 GIDSVGTVPASLITFASIQALKPDIIINAGTCGGFKVKGANIGDVFLVSDVVFHDRRIPI 145

Query:   132 PVFDLYGVGQRQAFSTPNLLRELNLKVCKLSTGDSLDMSSQDETSITANDATIKDME 188
             P+FDLYGVG RQAFSTPNLL+ELNLK+ +LSTGDSLDMS+QDET I ANDAT+KDME
Sbjct:   146 PMFDLYGVGLRQAFSTPNLLKELNLKIGRLSTGDSLDMSTQDETLIIANDATLKDME 202
GO:0003824 "catalytic activity" evidence=IEA;ISS
GO:0005737 "cytoplasm" evidence=ISM
GO:0009116 "nucleoside metabolic process" evidence=ISS
GO:0008930 "methylthioadenosine nucleosidase activity" evidence=IDA;NAS
GO:0005886 "plasma membrane" evidence=IDA
GO:0019509 "L-methionine salvage from methylthioadenosine" evidence=IDA
GO:0005829 "cytosol" evidence=IDA
GO:0000003 "reproduction" evidence=IGI
GO:0001944 "vasculature development" evidence=IGI
GO:0048573 "photoperiodism, flowering" evidence=RCA
TAIR|locus:2116925 MTN2 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9T0I8MTN1_ARATH3, ., 2, ., 2, ., 90.74010.91700.6629yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.2.2.90.946
3rd Layer3.2.20.963

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query193
PLN02584249 PLN02584, PLN02584, 5'-methylthioadenosine nucleos 1e-119
pfam01048232 pfam01048, PNP_UDP_1, Phosphorylase superfamily 2e-10
COG0775234 COG0775, Pfs, Nucleoside phosphorylase [Nucleotide 7e-08
TIGR01704228 TIGR01704, MTA/SAH-Nsdase, 5'-methylthioadenosine/ 7e-07
PRK05584230 PRK05584, PRK05584, 5'-methylthioadenosine/S-adeno 1e-06
PRK14697233 PRK14697, PRK14697, bifunctional 5'-methylthioaden 3e-05
PRK06698 459 PRK06698, PRK06698, bifunctional 5'-methylthioaden 4e-04
TIGR03664222 TIGR03664, fut_nucase, futalosine nucleosidase 0.002
>gnl|CDD|178196 PLN02584, PLN02584, 5'-methylthioadenosine nucleosidase Back     alignment and domain information 
 Score =  338 bits (868), Expect = e-119
 Identities = 129/184 (70%), Positives = 150/184 (81%)

Query: 5   GEKSQEAISSVVIIIAMQTEAMPLVNKFELKEDQDSVFPEGVPWVRYHGTYKDLHLNIIW 64
            ++    IS+V+I+IAMQ EAMPLVN   L ED DS FP+GVPWVRY GT+K L ++++ 
Sbjct: 1   QQEEMRPISTVLIVIAMQAEAMPLVNALGLVEDVDSPFPKGVPWVRYSGTHKGLRVHVVC 60

Query: 65  PGKDTSLEVDSVGTISASLVTYASIQALKPDLIINAGTAGGFKAKGASIGDVFLISDVAF 124
           PGKD +L VDSVGT+ ASLVTYA+IQALKPDLIINAGTAGGFKAKGA+IGDVFL + VA 
Sbjct: 61  PGKDKALGVDSVGTVPASLVTYAAIQALKPDLIINAGTAGGFKAKGAAIGDVFLATAVAN 120

Query: 125 HDRRIPIPVFDLYGVGQRQAFSTPNLLRELNLKVCKLSTGDSLDMSSQDETSITANDATI 184
           HDRRIPIPVFD YGVG R AF TPNL++ L LK   LSTG+SLDM+ QDE SI ANDAT+
Sbjct: 121 HDRRIPIPVFDKYGVGTRDAFPTPNLIKALGLKEGVLSTGNSLDMTEQDEESIKANDATV 180

Query: 185 KDME 188
           KDME
Sbjct: 181 KDME 184

Length = 249
>gnl|CDD|216264 pfam01048, PNP_UDP_1, Phosphorylase superfamily Back     alignment and domain information
>gnl|CDD|223846 COG0775, Pfs, Nucleoside phosphorylase [Nucleotide transport and metabolism] Back     alignment and domain information
>gnl|CDD|130765 TIGR01704, MTA/SAH-Nsdase, 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase Back     alignment and domain information
>gnl|CDD|180148 PRK05584, PRK05584, 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase; Validated Back     alignment and domain information
>gnl|CDD|184794 PRK14697, PRK14697, bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Provisional Back     alignment and domain information
>gnl|CDD|136007 PRK06698, PRK06698, bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated Back     alignment and domain information
>gnl|CDD|234302 TIGR03664, fut_nucase, futalosine nucleosidase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 193
PLN02584249 5'-methylthioadenosine nucleosidase 100.0
PRK06714236 S-adenosylhomocysteine nucleosidase; Validated 100.0
PRK14697233 bifunctional 5'-methylthioadenosine/S-adenosylhomo 100.0
TIGR01704228 MTA/SAH-Nsdase 5'-methylthioadenosine/S-adenosylho 100.0
PRK07164218 5'-methylthioadenosine/S-adenosylhomocysteine nucl 100.0
PRK06698 459 bifunctional 5'-methylthioadenosine/S-adenosylhomo 100.0
PRK05584230 5'-methylthioadenosine/S-adenosylhomocysteine nucl 100.0
PRK11178251 uridine phosphorylase; Provisional 100.0
TIGR01718245 Uridine-psphlse uridine phosphorylase. Sequences f 99.97
COG0775234 Pfs Nucleoside phosphorylase [Nucleotide transport 99.97
TIGR03664222 fut_nucase futalosine nucleosidase. This enzyme ca 99.97
PRK13374233 purine nucleoside phosphorylase; Provisional 99.97
PRK05819235 deoD purine nucleoside phosphorylase; Reviewed 99.97
PRK08236212 hypothetical protein; Provisional 99.96
TIGR00107232 deoD purine-nucleoside phosphorylase, family 1 (de 99.96
PF01048234 PNP_UDP_1: Phosphorylase superfamily; InterPro: IP 99.95
PRK07115258 AMP nucleosidase; Provisional 99.95
COG2820248 Udp Uridine phosphorylase [Nucleotide transport an 99.93
PRK06026212 5'-methylthioadenosine/S-adenosylhomocysteine nucl 99.92
TIGR01719287 euk_UDPppase uridine phosphorylase. This model rep 99.92
TIGR01705212 MTA/SAH-nuc-hyp 5'-methylthioadenosine/S-adenosylh 99.92
TIGR01721266 AMN-like AMP nucleosidase, putative. The sequences 99.9
COG0813236 DeoD Purine-nucleoside phosphorylase [Nucleotide t 99.9
PRK05634185 nucleosidase; Provisional 99.89
PRK08292489 AMP nucleosidase; Provisional 99.88
PRK08666261 5'-methylthioadenosine phosphorylase; Validated 99.88
TIGR01717477 AMP-nucleosdse AMP nucleosidase. This model repres 99.87
TIGR01697248 PNPH-PUNA-XAPA inosine guanosine and xanthosine ph 99.85
TIGR01700249 PNPH purine nucleoside phosphorylase I, inosine an 99.83
TIGR03468212 HpnG hopanoid-associated phosphorylase. The sequen 99.83
TIGR01694241 MTAP 5'-deoxy-5'-methylthioadenosine phosphorylase 99.82
PRK07077238 hypothetical protein; Provisional 99.81
PRK08202272 purine nucleoside phosphorylase; Provisional 99.8
TIGR01699248 XAPA xanthosine phosphorylase. (TIGR01698, TIGR017 99.68
PRK09136245 5'-methylthioadenosine phosphorylase; Validated 99.64
PRK08564267 5'-methylthioadenosine phosphorylase II; Reviewed 98.36
TIGR01698237 PUNP purine nucleotide phosphorylase. methylthioad 98.25
KOG3728308 consensus Uridine phosphorylase [Nucleotide transp 98.21
PRK07432290 5'-methylthioadenosine phosphorylase; Provisional 98.14
PRK07823264 5'-methylthioadenosine phosphorylase; Validated 98.03
PF06516 314 NUP: Purine nucleoside permease (NUP); InterPro: I 98.01
PRK08931289 5'-methylthioadenosine phosphorylase; Provisional 97.97
COG0005262 Pnp Purine nucleoside phosphorylase [Nucleotide tr 97.64
KOG3985283 consensus Methylthioadenosine phosphorylase MTAP [ 97.18
COG5042 349 NUP Purine nucleoside permease [Nucleotide transpo 96.15
KOG3984286 consensus Purine nucleoside phosphorylase [Nucleot 96.02
COG2039207 Pcp Pyrrolidone-carboxylate peptidase (N-terminal 85.1
PF01470202 Peptidase_C15: Pyroglutamyl peptidase This is fami 83.33
PRK13195222 pyrrolidone-carboxylate peptidase; Provisional 80.69
>PLN02584 5'-methylthioadenosine nucleosidase Back     alignment and domain information 
Probab=100.00  E-value=3.7e-40  Score=273.19  Aligned_cols=187  Identities=70%  Similarity=1.034  Sum_probs=164.5

Q ss_pred             cccCCCceEEEEeecHHHHHHHHHhccccccCCCCCCCCCCeEEEEEEECCEeEEEEecCCCCCCCCCCCCHHHHHHHHH
Q 029435            7 KSQEAISSVVIIIAMQTEAMPLVNKFELKEDQDSVFPEGVPWVRYHGTYKDLHLNIIWPGKDTSLEVDSVGTISASLVTY   86 (193)
Q Consensus         7 ~~~~~~~~i~Ii~A~~~E~~~l~~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~G~~~~~~~~~iG~v~Aa~~~~   86 (193)
                      -.++++++|+|++||++|++++++++...+.....|.+..++.+|+|+++|++|+++.+|+|++|.++|||++|||++++
T Consensus         3 ~~~~~~~~I~Ii~Am~~E~~~l~~~l~~~~~~~~~~~~~~~~~~~~G~~~g~~V~v~~sG~~~~~~i~~IGkvnAA~~~~   82 (249)
T PLN02584          3 EEMRPISTVLIVIAMQAEAMPLVNALGLVEDVDSPFPKGVPWVRYSGTHKGLRVHVVCPGKDKALGVDSVGTVPASLVTY   82 (249)
T ss_pred             cccCCCceEEEEEEcHHHHHHHHHHHhhhccccccccccCCeeEEEEEECCEEEEEEecCCccccccCccCHHHHHHHHH
Confidence            45789999999999999999999999888775444545678999999999999999999999999999999999999999


Q ss_pred             HHHHHhCCCEEEEEeeeCccCCCCCCcccEEEecceeEecCCCCccCccccCCCCCCCCCChhhhcCCceeEEEEEeccc
Q 029435           87 ASIQALKPDLIINAGTAGGFKAKGASIGDVFLISDVAFHDRRIPIPVFDLYGVGQRQAFSTPNLLRELNLKVCKLSTGDS  166 (193)
Q Consensus        87 ~li~~~~~~~vi~~G~aG~l~~~~~~iGDvvi~~~~~~~d~~~~~~~f~~~~~~~~p~~~~~~L~~~~~~~~G~i~T~d~  166 (193)
                      .+|++|+|+.|||+|+|||++++++++||+||++++++||.+...+.|+.|..++.|.++++.+.....++.|++.|+|+
T Consensus        83 ~li~~~~~~~II~~G~aG~l~~~~l~vGDvVia~~~~~~D~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~G~i~SgD~  162 (249)
T PLN02584         83 AAIQALKPDLIINAGTAGGFKAKGAAIGDVFLATAVANHDRRIPIPVFDKYGVGTRDAFPTPNLIKALGLKEGVLSTGNS  162 (249)
T ss_pred             HHHHhcCCCEEEEEecccCcCcCCCCcCCEEEECeeEecccCCCcccccccccCccccCCCHHHHhhCCCeEEEEEEeCE
Confidence            99999999999999999999833799999999999999998755456655777777777776666566789999999999


Q ss_pred             eecChHhHHHHHhCCCeEEcccccccC
Q 029435          167 LDMSSQDETSITANDATIKDMEVRAEF  193 (193)
Q Consensus       167 ~i~~~~~~~~l~~~~~~~vDME~aAi~  193 (193)
                      |+.+.+..+.+++++++++|||+||++
T Consensus       163 F~~~~~~~~~~~~~~a~~vDME~aAia  189 (249)
T PLN02584        163 LDMTEQDEESIKANDATVKDMEGAAVA  189 (249)
T ss_pred             EeCCHHHHHHHHHcCCcEEechHHHHH
Confidence            998877666777789999999999974

>PRK06714 S-adenosylhomocysteine nucleosidase; Validated Back     alignment and domain information
>PRK14697 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Provisional Back     alignment and domain information
>TIGR01704 MTA/SAH-Nsdase 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase Back     alignment and domain information
>PRK07164 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase; Provisional Back     alignment and domain information
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated Back     alignment and domain information
>PRK05584 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase; Validated Back     alignment and domain information
>PRK11178 uridine phosphorylase; Provisional Back     alignment and domain information
>TIGR01718 Uridine-psphlse uridine phosphorylase Back     alignment and domain information
>COG0775 Pfs Nucleoside phosphorylase [Nucleotide transport and metabolism] Back     alignment and domain information
>TIGR03664 fut_nucase futalosine nucleosidase Back     alignment and domain information
>PRK13374 purine nucleoside phosphorylase; Provisional Back     alignment and domain information
>PRK05819 deoD purine nucleoside phosphorylase; Reviewed Back     alignment and domain information
>PRK08236 hypothetical protein; Provisional Back     alignment and domain information
>TIGR00107 deoD purine-nucleoside phosphorylase, family 1 (deoD) Back     alignment and domain information
>PF01048 PNP_UDP_1: Phosphorylase superfamily; InterPro: IPR000845 Phosphorylases in this entry include: Purine nucleoside phosphorylase (2 Back     alignment and domain information
>PRK07115 AMP nucleosidase; Provisional Back     alignment and domain information
>COG2820 Udp Uridine phosphorylase [Nucleotide transport and metabolism] Back     alignment and domain information
>PRK06026 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase; Validated Back     alignment and domain information
>TIGR01719 euk_UDPppase uridine phosphorylase Back     alignment and domain information
>TIGR01705 MTA/SAH-nuc-hyp 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase, putative Back     alignment and domain information
>TIGR01721 AMN-like AMP nucleosidase, putative Back     alignment and domain information
>COG0813 DeoD Purine-nucleoside phosphorylase [Nucleotide transport and metabolism] Back     alignment and domain information
>PRK05634 nucleosidase; Provisional Back     alignment and domain information
>PRK08292 AMP nucleosidase; Provisional Back     alignment and domain information
>PRK08666 5'-methylthioadenosine phosphorylase; Validated Back     alignment and domain information
>TIGR01717 AMP-nucleosdse AMP nucleosidase Back     alignment and domain information
>TIGR01697 PNPH-PUNA-XAPA inosine guanosine and xanthosine phosphorylase family Back     alignment and domain information
>TIGR01700 PNPH purine nucleoside phosphorylase I, inosine and guanosine-specific Back     alignment and domain information
>TIGR03468 HpnG hopanoid-associated phosphorylase Back     alignment and domain information
>TIGR01694 MTAP 5'-deoxy-5'-methylthioadenosine phosphorylase Back     alignment and domain information
>PRK07077 hypothetical protein; Provisional Back     alignment and domain information
>PRK08202 purine nucleoside phosphorylase; Provisional Back     alignment and domain information
>TIGR01699 XAPA xanthosine phosphorylase Back     alignment and domain information
>PRK09136 5'-methylthioadenosine phosphorylase; Validated Back     alignment and domain information
>PRK08564 5'-methylthioadenosine phosphorylase II; Reviewed Back     alignment and domain information
>TIGR01698 PUNP purine nucleotide phosphorylase Back     alignment and domain information
>KOG3728 consensus Uridine phosphorylase [Nucleotide transport and metabolism] Back     alignment and domain information
>PRK07432 5'-methylthioadenosine phosphorylase; Provisional Back     alignment and domain information
>PRK07823 5'-methylthioadenosine phosphorylase; Validated Back     alignment and domain information
>PF06516 NUP: Purine nucleoside permease (NUP); InterPro: IPR009486 This family consists of several purine nucleoside permease from both bacteria and fungi [] Back     alignment and domain information
>PRK08931 5'-methylthioadenosine phosphorylase; Provisional Back     alignment and domain information
>COG0005 Pnp Purine nucleoside phosphorylase [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG3985 consensus Methylthioadenosine phosphorylase MTAP [Nucleotide transport and metabolism] Back     alignment and domain information
>COG5042 NUP Purine nucleoside permease [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG3984 consensus Purine nucleoside phosphorylase [Nucleotide transport and metabolism] Back     alignment and domain information
>COG2039 Pcp Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl peptidase) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF01470 Peptidase_C15: Pyroglutamyl peptidase This is family C15 in the peptidase classification Back     alignment and domain information
>PRK13195 pyrrolidone-carboxylate peptidase; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query193
2h8g_A267 5'-Methylthioadenosine Nucleosidase From Arabidopsi 3e-69
3bsf_A254 Crystal Structure Of The MtaSAH NUCLEOSIDASE Length 2e-61
>pdb|2H8G|A Chain A, 5'-Methylthioadenosine Nucleosidase From Arabidopsis Thaliana Length = 267 Back     alignment and structure 
Iteration: 1

 Score =  257 bits (656), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 122/180 (67%), Positives = 145/180 (80%)
Query: 12  ISSVVIIIAMQTEAMPLVNKFELKEDQDSVFPEGVPWVRYHGTYKDLHLNIIWPGKDTSL 71
           ISSVV +IAMQ EA+PLVNKF L E  DS   +G+PWV YHG +KDL +N++ PG+D +L
Sbjct: 26  ISSVVFVIAMQAEALPLVNKFGLSETTDSPLGKGLPWVLYHGVHKDLRINVVCPGRDAAL 85
Query: 72  EVDSVGTISASLVTYASIQALKPDLIINXXXXXXXXXXXXSIGDVFLISDVAFHDRRIPI 131
            +DSVGT+ ASL+T+ASIQALKPD+IIN            +IGDVFL+SDV FHDRRIPI
Sbjct: 86  GIDSVGTVPASLITFASIQALKPDIIINAGTCGGFKVKGANIGDVFLVSDVVFHDRRIPI 145
Query: 132 PVFDLYGVGQRQAFSTPNLLRELNLKVCKLSTGDSLDMSSQDETSITANDATIKDMEVRA 191
           P+FDLYGVG RQAFSTPNLL+ELNLK+ +LSTGDSLDMS+QDET I ANDAT+KDME  A
Sbjct: 146 PMFDLYGVGLRQAFSTPNLLKELNLKIGRLSTGDSLDMSTQDETLIIANDATLKDMEGAA 205
>pdb|3BSF|A Chain A, Crystal Structure Of The MtaSAH NUCLEOSIDASE Length = 254 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query193
2h8g_A267 5'-methylthioadenosine nucleosidase; protein-adeni 8e-51
3bsf_A254 AT4G34840, nucleosidase; alpha-beta, hydrolase; HE 1e-50
3dp9_A231 MTA/SAH nucleosidase; vibrio cholerae 5'-methylthi 2e-25
3eei_A233 5-methylthioadenosine nucleosidase/S- adenosylhomo 1e-23
3o4v_A234 MTA/SAH nucleosidase; mixed alpha/beta dimer, hydr 2e-23
3bl6_A230 5'-methylthioadenosine nucleosidase/S- adenosylhom 6e-23
3nm6_B230 MTA/SAH nucleosidase; hydrolase; HET: ADE; 1.60A { 1e-22
1zos_A230 5'-methylthioadenosine / S-adenosylhomocysteine nu 1e-21
1qzv_F154 Plant photosystem I: subunit PSAF; photosynthesis, 8e-04
>2h8g_A 5'-methylthioadenosine nucleosidase; protein-adenine complex, hydrolase; HET: ADE; 1.50A {Arabidopsis thaliana} PDB: 2qsu_A 2qtg_A* 2qtt_A* 3lgs_A* Length = 267 Back     alignment and structure
 Score =  163 bits (414), Expect = 8e-51
 Identities = 132/186 (70%), Positives = 156/186 (83%)

Query: 6   EKSQEAISSVVIIIAMQTEAMPLVNKFELKEDQDSVFPEGVPWVRYHGTYKDLHLNIIWP 65
            +    ISSVV +IAMQ EA+PLVNKF L E  DS   +G+PWV YHG +KDL +N++ P
Sbjct: 20  SEILRPISSVVFVIAMQAEALPLVNKFGLSETTDSPLGKGLPWVLYHGVHKDLRINVVCP 79

Query: 66  GKDTSLEVDSVGTISASLVTYASIQALKPDLIINAGTAGGFKAKGASIGDVFLISDVAFH 125
           G+D +L +DSVGT+ ASL+T+ASIQALKPD+IINAGT GGFK KGA+IGDVFL+SDV FH
Sbjct: 80  GRDAALGIDSVGTVPASLITFASIQALKPDIIINAGTCGGFKVKGANIGDVFLVSDVVFH 139

Query: 126 DRRIPIPVFDLYGVGQRQAFSTPNLLRELNLKVCKLSTGDSLDMSSQDETSITANDATIK 185
           DRRIPIP+FDLYGVG RQAFSTPNLL+ELNLK+ +LSTGDSLDMS+QDET I ANDAT+K
Sbjct: 140 DRRIPIPMFDLYGVGLRQAFSTPNLLKELNLKIGRLSTGDSLDMSTQDETLIIANDATLK 199

Query: 186 DMEVRA 191
           DME  A
Sbjct: 200 DMEGAA 205
>3bsf_A AT4G34840, nucleosidase; alpha-beta, hydrolase; HET: ADE; 2.90A {Arabidopsis thaliana} Length = 254 Back     alignment and structure
>3dp9_A MTA/SAH nucleosidase; vibrio cholerae 5'-methylthioadenosine/S-adenosyl homocystei nucleosidase, butylthio dadme immucillin A, MTAN, hydrolase; HET: BIG; 2.30A {Vibrio cholerae} Length = 231 Back     alignment and structure
>3eei_A 5-methylthioadenosine nucleosidase/S- adenosylhomocysteine nucleosidase; MTAN; HET: MTM; 1.78A {Neisseria meningitidis serogroup B} Length = 233 Back     alignment and structure
>3o4v_A MTA/SAH nucleosidase; mixed alpha/beta dimer, hydrolase; HET: 4CT; 1.75A {Escherichia coli} PDB: 1jys_A* 1nc1_A* 1nc3_A* 1y6q_A* 1y6r_A* 1z5p_A* 3df9_A* 1z5n_A* 1z5o_A* Length = 234 Back     alignment and structure
>3bl6_A 5'-methylthioadenosine nucleosidase/S- adenosylhomocysteine nucleosidase; MTAN, alpha and beta proteins, hydrolase; HET: FMC; 1.70A {Staphylococcus aureus} Length = 230 Back     alignment and structure
>3nm6_B MTA/SAH nucleosidase; hydrolase; HET: ADE; 1.60A {Helicobacter pylori} PDB: 3nm5_A* 3nm4_A* Length = 230 Back     alignment and structure
>1zos_A 5'-methylthioadenosine / S-adenosylhomocysteine nucleosidase; transition state, inhibitor, hydrolase; HET: MTM; 1.60A {Streptococcus pneumoniae R6} PDB: 3mms_A* Length = 230 Back     alignment and structure
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query193
3bsf_A254 AT4G34840, nucleosidase; alpha-beta, hydrolase; HE 100.0
2h8g_A267 5'-methylthioadenosine nucleosidase; protein-adeni 100.0
4g41_A236 MTA/SAH nucleosidase; mixed alpha/beta, hydrolase, 100.0
3nm6_B230 MTA/SAH nucleosidase; hydrolase; HET: ADE; 1.60A { 100.0
3eei_A233 5-methylthioadenosine nucleosidase/S- adenosylhomo 100.0
3o4v_A234 MTA/SAH nucleosidase; mixed alpha/beta dimer, hydr 100.0
3dp9_A231 MTA/SAH nucleosidase; vibrio cholerae 5'-methylthi 100.0
3bl6_A230 5'-methylthioadenosine nucleosidase/S- adenosylhom 99.98
1zos_A230 5'-methylthioadenosine / S-adenosylhomocysteine nu 99.98
3ddo_A253 Urdpase, upase, uridine phosphorylase; transferase 99.97
1je0_A236 MTAP;, 5'-methylthioadenosine phosphorylase; alpha 99.97
1odk_A235 Purine nucleoside phosphorylase; alpha-beta protei 99.96
2b94_A267 Purine nucleoside phosphorylase; SGPP, structural 99.96
3u40_A242 Pnpase, purine nucleoside phosphorylase; structura 99.95
3uaw_A235 PNP, purine nucleoside phosphorylase DEOD-type; ne 99.95
1z34_A235 Purine nucleoside phosphorylase; alpha-beta-alpha 99.95
3phc_A275 Purine nucleoside phosphorylase; PNP,immucillin, t 99.95
3qpb_A282 Uridine phosphorylase; hexamer, NP-I superfamily, 99.95
1vhw_A253 Purine nucleoside phosphorylase; structural genomi 99.95
3mb8_A279 Purine nucleoside phosphorylase; PNP, immucillin H 99.95
1ybf_A268 AMP nucleosidase; structural genomics, protein str 99.93
3bje_A349 Nucleoside phosphorylase, putative; uridine phosph 99.92
3euf_A328 Uridine phosphorylase 1; nucleoside phosphorylase, 99.91
3p0f_A297 Uridine phosphorylase 2; transferase; HET: BAU; 1. 99.91
1cb0_A283 Protein (5'-deoxy-5'-methylthioadenosine phosphor; 99.89
2a8y_A270 5'-methylthioadenosine phosphorylase (MTAP); alpha 99.88
1wta_A275 5'-methylthioadenosine phosphorylase; A/B structur 99.88
1t8s_A484 AMP nucleosidase; alpha-beta-alpha sandwich, alpha 99.87
2p4s_A373 Purine nucleoside phosphorylase; transferase; HET: 99.75
3ozb_A259 Methylthioadenosine phosphorylase; 5'-methylthioin 99.72
1vmk_A277 Purine nucleoside phosphorylase; TM1596, structura 99.72
1g2o_A268 Purine nucleoside phosphorylase; trimer, transitio 99.71
1tcv_A287 Purine-nucleoside phosphorylase; transferase; HET: 99.71
3odg_A287 Xanthosine phosphorylase; structural genomics, PSI 99.69
3khs_A285 Purine nucleoside phosphorylase; alpha-beta struct 99.61
3fuc_A284 Purine nucleoside phosphorylase; recombinant, glyc 99.61
1qe5_A266 Pentosyltransferase; enzyme, purine nucleoside pho 99.59
3la8_A303 SMU.1229, putative purine nucleoside phosphorylase 99.55
3phb_E324 Purine nucleoside phosphorylase; PNP,immucillin, t 99.55
2ebj_A192 Pyrrolidone carboxyl peptidase; TTHA08 degradation 82.79
3giu_A215 Pyrrolidone-carboxylate peptidase; IDP00836, hydro 82.12
4gxh_A216 Pyrrolidone-carboxylate peptidase; structural geno 81.47
1a2z_A220 Pyrrolidone carboxyl peptidase; N-pyroglutamate hy 80.47
>3bsf_A AT4G34840, nucleosidase; alpha-beta, hydrolase; HET: ADE; 2.90A {Arabidopsis thaliana} Back     alignment and structure
Probab=100.00  E-value=1.6e-35  Score=244.57  Aligned_cols=185  Identities=63%  Similarity=1.032  Sum_probs=160.3

Q ss_pred             ccCCCceEEEEeecHHHHHHHHHhccccccCCCCCCCCCCeEEEEEEECCEeEEEEecCCCCCCCCCCCCHHHHHHHHHH
Q 029435            8 SQEAISSVVIIIAMQTEAMPLVNKFELKEDQDSVFPEGVPWVRYHGTYKDLHLNIIWPGKDTSLEVDSVGTISASLVTYA   87 (193)
Q Consensus         8 ~~~~~~~i~Ii~A~~~E~~~l~~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~G~~~~~~~~~iG~v~Aa~~~~~   87 (193)
                      +.+++++|+||+||+.|++++++.|+..+.....+++.+++.||.|+++|++|+++.+|.+..|+++.||++|||+++++
T Consensus         9 ~~~~~~~i~II~a~~~E~~~l~~~l~~~~~~~~~~~~~~~~~~~~G~~~g~~V~v~~~G~~h~~~~~~iG~~~aa~~~~~   88 (254)
T 3bsf_A            9 EKRPISTIVFIVAMQKEAQPLINRLRLVEEVNTPFPKEVTWIMFKGMYKDLNINIVCPGKDSTLGVESVGTVPASLVTYA   88 (254)
T ss_dssp             --CBCCEEEEECSCHHHHHHHHHHHTCEEESSCSSCTTSCCEEEEEEETTEEEEEEECCBCTTTCSBCCSHHHHHHHHHH
T ss_pred             cCCCCCeEEEEEeCHHHHHHHHHHhcccccccccccCCCCeEEEEEEECCEEEEEEECCCccccccCccCHHHHHHHHHH
Confidence            35667899999999999999999998876642223234789999999999999999999888898889999999999999


Q ss_pred             HHHHhCCCEEEEEeeeCcc-CCCCCCcccEEEecceeEecCCCCccCccccCCCCCCCCCChhhhcCCceeEEEEEeccc
Q 029435           88 SIQALKPDLIINAGTAGGF-KAKGASIGDVFLISDVAFHDRRIPIPVFDLYGVGQRQAFSTPNLLRELNLKVCKLSTGDS  166 (193)
Q Consensus        88 li~~~~~~~vi~~G~aG~l-~~~~~~iGDvvi~~~~~~~d~~~~~~~f~~~~~~~~p~~~~~~L~~~~~~~~G~i~T~d~  166 (193)
                      |+.+|+|+.+|++|+|||+ + +++++||+||+++++++|.+.+.+.|+.|..++.|.|+++.|.++++++.|+++|+|+
T Consensus        89 ll~~~~~~~iI~~G~aGgl~~-~~~~~GDvvi~~~~~~~d~~~~~~~~~~~~~~~~p~~~~~~L~~~~~~~~G~i~sgd~  167 (254)
T 3bsf_A           89 SILAIQPDLIINAGTAGGFKA-KGACISDVYVVSTVAFHDRRIPVPVLDIYGVGMRNTFPTPNLIKELNLKVGRLSTGDS  167 (254)
T ss_dssp             HHHSSCCSEEEEEEEEEECGG-GTCCTTCEEEEEEEEESSCCCCSTTHHHHHHCCEECCCCHHHHHHTTCEEEEEEECSC
T ss_pred             HHHHcCCCEEEEEEeecCcCC-CCCccCCEEEEeeeeeccCCCCccccCcCCCCcCCCCCCHHHHhCCCeEEeeEEECcc
Confidence            9999999999999999999 7 7999999999999999998755445644666778888787787778899999999999


Q ss_pred             eecChHhHHHHHhCCCeEEcccccccC
Q 029435          167 LDMSSQDETSITANDATIKDMEVRAEF  193 (193)
Q Consensus       167 ~i~~~~~~~~l~~~~~~~vDME~aAi~  193 (193)
                      |+.+++.++.+++++++++|||+||++
T Consensus       168 f~~~~~~~~~~~~~g~~~veME~aa~a  194 (254)
T 3bsf_A          168 MDMSPHDEESITANDATVKDMEGAAVA  194 (254)
T ss_dssp             SSCCHHHHHHHHHTTCSEEESSHHHHH
T ss_pred             ccCCHHHHHHHHHcCCcEEECcHHHHH
Confidence            998888888888889999999999873
>2h8g_A 5'-methylthioadenosine nucleosidase; protein-adenine complex, hydrolase; HET: ADE; 1.50A {Arabidopsis thaliana} PDB: 2qsu_A 2qtg_A* 2qtt_A* 3lgs_A* Back     alignment and structure
>4g41_A MTA/SAH nucleosidase; mixed alpha/beta, hydrolase, S-adenosylhomocysteine, cleavag; HET: MTA; 1.45A {Streptococcus pyogenes} Back     alignment and structure
>3nm6_B MTA/SAH nucleosidase; hydrolase; HET: ADE; 1.60A {Helicobacter pylori} SCOP: c.56.2.0 PDB: 3nm5_A* 3nm4_A* 4ffs_A* Back     alignment and structure
>3eei_A 5-methylthioadenosine nucleosidase/S- adenosylhomocysteine nucleosidase; MTAN; HET: MTM; 1.78A {Neisseria meningitidis serogroup B} SCOP: c.56.2.1 Back     alignment and structure
>3o4v_A MTA/SAH nucleosidase; mixed alpha/beta dimer, hydrolase; HET: 4CT; 1.75A {Escherichia coli} SCOP: c.56.2.1 PDB: 1jys_A* 1nc1_A* 1nc3_A* 1y6q_A* 1y6r_A* 1z5p_A* 3df9_A* 1z5n_A* 1z5o_A* 4g89_A* Back     alignment and structure
>3dp9_A MTA/SAH nucleosidase; vibrio cholerae 5'-methylthioadenosine/S-adenosyl homocystei nucleosidase, butylthio dadme immucillin A, MTAN, hydrolase; HET: BIG; 2.30A {Vibrio cholerae} SCOP: c.56.2.1 Back     alignment and structure
>3bl6_A 5'-methylthioadenosine nucleosidase/S- adenosylhomocysteine nucleosidase; MTAN, alpha and beta proteins, hydrolase; HET: FMC; 1.70A {Staphylococcus aureus} Back     alignment and structure
>1zos_A 5'-methylthioadenosine / S-adenosylhomocysteine nucleosidase; transition state, inhibitor, hydrolase; HET: MTM; 1.60A {Streptococcus pneumoniae R6} PDB: 3mms_A* Back     alignment and structure
>3ddo_A Urdpase, upase, uridine phosphorylase; transferase, cytoplasm, glycosyltransferase; 1.50A {Salmonella typhimurium} SCOP: c.56.2.1 PDB: 1ryz_A 1sj9_A* 1y1q_A* 1y1s_A 1y1r_A 1zl2_A* 2hn9_A 1y1t_A* 2hsw_A 2hwu_A* 2pga_A* 2hrd_A 3dps_A 3fwp_A* 3nsr_A* 3c74_A* 2qdk_A 2iq5_A 2oec_A* 2i8a_A ... Back     alignment and structure
>1je0_A MTAP;, 5'-methylthioadenosine phosphorylase; alpha-beta protein, transferase; 1.60A {Sulfolobus solfataricus} SCOP: c.56.2.1 PDB: 1jdt_A* 1jdu_A 1jdv_A* 1jdz_A* 1jds_A 1je1_A* 1jp7_A 1jpv_A Back     alignment and structure
>1odk_A Purine nucleoside phosphorylase; alpha-beta protein, transferase, riken structural genomics/proteomics initiative, RSGI; 1.9A {Thermus thermophilus} SCOP: c.56.2.1 PDB: 1odj_A* 1odi_A 1odl_A Back     alignment and structure
>2b94_A Purine nucleoside phosphorylase; SGPP, structural genomics, PSI, protein structure initiative UDP, ontario/toronto SGC; 1.85A {Plasmodium knowlesi} PDB: 3emv_A 1sq6_A 2bsx_A* 3enz_A* Back     alignment and structure
>3u40_A Pnpase, purine nucleoside phosphorylase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: ADN; 2.05A {Entamoeba histolytica} SCOP: c.56.2.0 PDB: 3tl6_A* Back     alignment and structure
>3uaw_A PNP, purine nucleoside phosphorylase DEOD-type; necleoside phosphorylase I (NP-I) family, transferase; HET: ADN GOL; 1.20A {Bacillus cereus} PDB: 2ac7_A 3uav_A* 3uax_A* 1xe3_A 3uay_A* 3uaz_A* 4d8y_A 4d8x_A 4d8v_A 4d98_A 4d9h_A* 4da0_A* 4da6_A* 4da7_A* 4da8_A* 4dab_A* 4dae_A* 4dan_A* 4dao_A* 4dar_A* Back     alignment and structure
>1z34_A Purine nucleoside phosphorylase; alpha-beta-alpha sandwich, transferase; HET: 2FD; 2.40A {Trichomonas vaginalis} PDB: 1z33_A* 1z35_A* 1z36_A* 1z37_A* 1z38_A* 1z39_A* 2i4t_A* 2isc_A* Back     alignment and structure
>3phc_A Purine nucleoside phosphorylase; PNP,immucillin, transferase-transferase inhibitor complex; HET: IM5; 2.00A {Plasmodium falciparum} PDB: 1q1g_A* 1nw4_A* 3fow_A* Back     alignment and structure
>3qpb_A Uridine phosphorylase; hexamer, NP-I superfamily, pyrimidine salvage pathway, uridi phosphorylase, transition state; HET: R1P; 1.82A {Streptococcus pyogenes serotype M6} Back     alignment and structure
>1vhw_A Purine nucleoside phosphorylase; structural genomics, transferase; HET: ADN; 1.54A {Vibrio cholerae} SCOP: c.56.2.1 PDB: 1vhj_A* 3of3_A* 3occ_A* 1pw7_A* 1pr1_A* 1pr2_A* 1pr4_A* 1pr5_A* 1pr0_A* 1pr6_A* 3onv_A 1pk7_A* 1k9s_A* 1pke_A* 1pk9_A 3ooe_A 3ooh_A 1ecp_A 1a69_A 1oty_A* ... Back     alignment and structure
>3mb8_A Purine nucleoside phosphorylase; PNP, immucillin H, IMMH, TR; HET: IMH; 1.90A {Toxoplasma gondii} Back     alignment and structure
>1ybf_A AMP nucleosidase; structural genomics, protein structure initiative, PSI, NEW research center for structural genomics, nysgxrc; 2.90A {Bacteroides thetaiotaomicron} SCOP: c.56.2.1 Back     alignment and structure
>3bje_A Nucleoside phosphorylase, putative; uridine phosphorylase, structural medical structural genomics of pathogenic protozoa consorti MSGPP; HET: R1P; 1.44A {Trypanosoma brucei} Back     alignment and structure
>3euf_A Uridine phosphorylase 1; nucleoside phosphorylase, uridine rescue, 5- benzylacyclouridine, alternative splicing, glycosyltransferase, transferase; HET: BAU; 1.90A {Homo sapiens} PDB: 3eue_A* 3nbq_A 3ku4_A 3kuk_A* 3kvr_A 3kvy_A Back     alignment and structure
>3p0f_A Uridine phosphorylase 2; transferase; HET: BAU; 1.54A {Homo sapiens} PDB: 3p0e_A* 2xrf_A Back     alignment and structure
>1cb0_A Protein (5'-deoxy-5'-methylthioadenosine phosphor; methylthioadenosine phosphorylase, purine nucleoside phospho purine salvage, adenine; HET: ADE; 1.70A {Homo sapiens} SCOP: c.56.2.1 PDB: 1cg6_A* 1k27_A* 1sd1_A* 1sd2_A* 3ozc_A* 3ozd_A* 3oze_A Back     alignment and structure
>2a8y_A 5'-methylthioadenosine phosphorylase (MTAP); alpha/beta, beta sheet, beta barrel, transferase; HET: MTA; 1.45A {Sulfolobus solfataricus} PDB: 3t94_A* 1v4n_A Back     alignment and structure
>1wta_A 5'-methylthioadenosine phosphorylase; A/B structure, transferase; HET: ADE; 1.78A {Aeropyrum pernix} Back     alignment and structure
>1t8s_A AMP nucleosidase; alpha-beta-alpha sandwich, alpha-beta fold, hydrolase; HET: FMP; 2.60A {Escherichia coli} SCOP: c.56.2.1 PDB: 1t8r_A* 1t8w_A 1t8y_A 2guw_A Back     alignment and structure
>2p4s_A Purine nucleoside phosphorylase; transferase; HET: DIH; 2.20A {Anopheles gambiae} Back     alignment and structure
>3ozb_A Methylthioadenosine phosphorylase; 5'-methylthioinosine,phosphorylase, transferase; HET: HPA; 2.80A {Pseudomonas aeruginosa} Back     alignment and structure
>1vmk_A Purine nucleoside phosphorylase; TM1596, structural genomics protein structure initiative, PSI, joint center for structu genomics; HET: GUN; 2.01A {Thermotoga maritima} SCOP: c.56.2.1 Back     alignment and structure
>1g2o_A Purine nucleoside phosphorylase; trimer, transition-state complex, transferase; HET: IMH; 1.75A {Mycobacterium tuberculosis} SCOP: c.56.2.1 PDB: 1i80_A* 1n3i_A* 3iom_A* Back     alignment and structure
>1tcv_A Purine-nucleoside phosphorylase; transferase; HET: NDS; 1.75A {Schistosoma mansoni} PDB: 1tcu_A* 1td1_A 3djf_A* 3e0q_A* 3e9r_A* 3e9z_A* 3f8w_A* 3faz_A* 3fb1_A* 3fnq_A* 3iex_A* Back     alignment and structure
>3odg_A Xanthosine phosphorylase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; HET: XAN; 1.64A {Yersinia pseudotuberculosis} PDB: 1yqq_A* 1yqu_A* 1yr3_A* Back     alignment and structure
>3khs_A Purine nucleoside phosphorylase; alpha-beta structure, mixed beta-barrel, hydrolase; 2.38A {Grouper iridovirus} SCOP: c.56.2.0 Back     alignment and structure
>3fuc_A Purine nucleoside phosphorylase; recombinant, glycosyltransferase, transferase, 9-deazaguanine, multisubstrate analogue inhibitors, nucleoside-binding; HET: 9D9 9DG; 1.45A {Bos taurus} SCOP: c.56.2.1 PDB: 1b8n_A* 1b8o_A* 2ai2_A* 1v48_A* 2ai1_A* 2ai3_A* 1lvu_A* 1lv8_A* 1a9o_A 1a9p_A* 1a9s_A* 1fxu_A* 2qpl_A* 1a9t_A* 3pnp_A 1pbn_A 4pnp_A 1a9q_A* 1a9r_A* 1vfn_A* ... Back     alignment and structure
>1qe5_A Pentosyltransferase; enzyme, purine nucleoside phosphorylase; 2.20A {Cellulomonas SP} SCOP: c.56.2.1 PDB: 1c3x_A Back     alignment and structure
>3la8_A SMU.1229, putative purine nucleoside phosphorylase; PUNA, glycosyltransferase, transferase; 1.80A {Streptococcus mutans} PDB: 3lba_A* Back     alignment and structure
>3phb_E Purine nucleoside phosphorylase; PNP,immucillin, transferase-transferase inhibitor complex; HET: IM5; 2.30A {Homo sapiens} Back     alignment and structure
>2ebj_A Pyrrolidone carboxyl peptidase; TTHA08 degradation of proteins and peptides, structural genomics; 1.90A {Thermus thermophilus} Back     alignment and structure
>3giu_A Pyrrolidone-carboxylate peptidase; IDP00836, hydrolase, PROT thiol protease, structural genomics; HET: MSE PG4; 1.25A {Staphylococcus aureus subsp} SCOP: c.56.4.0 Back     alignment and structure
>4gxh_A Pyrrolidone-carboxylate peptidase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, hydrolase; 2.70A {Xenorhabdus bovienii} Back     alignment and structure
>1a2z_A Pyrrolidone carboxyl peptidase; N-pyroglutamate hydrolysis; 1.73A {Thermococcus litoralis} SCOP: c.56.4.1 Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 193
d1jysa_230 c.56.2.1 (A:) 5'-Methylthioadenosine/S-Adenosylhom 2e-10
d1t8sa_477 c.56.2.1 (A:) AMP nucleosidase {Escherichia coli [ 1e-06
>d1jysa_ c.56.2.1 (A:) 5'-Methylthioadenosine/S-Adenosylhomocysteine nucleosidase {Escherichia coli [TaxId: 562]} Length = 230 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Purine and uridine phosphorylases
family: Purine and uridine phosphorylases
domain: 5'-Methylthioadenosine/S-Adenosylhomocysteine nucleosidase
species: Escherichia coli [TaxId: 562]

 Score = 55.7 bits (133), Expect = 2e-10
 Identities = 40/192 (20%), Positives = 70/192 (36%), Gaps = 28/192 (14%)

Query: 15  VVIIIAMQTEAMPLVNKFELKEDQDSVFPEGVPWVRYHGTYKDLHLNIIWPGKDTSLEVD 74
           + II AM+ E   L +K E ++              Y G      + ++  G        
Sbjct: 3   IGIIGAMEEEVTLLRDKIENRQTISL-----GGCEIYTGQLNGTEVALLKSGIG------ 51

Query: 75  SVGTISASLVTYASIQALKPDLIINAGTAGGFKAKGASIGDVFLISDVAFHDRRIPIPVF 134
               ++A+L     ++  KPD+IIN G+AGG       +GD+ +  +  +HD  +    +
Sbjct: 52  ---KVAAALGATLLLEHCKPDVIINTGSAGGLA-PTLKVGDIVVSDEARYHDADVTAFGY 107

Query: 135 DLYGVGQRQAF--STPNLLR---------ELNLKVCKLSTGDSLDMSSQDETSITAN--D 181
           +   +    A   +   L+           LN     + +GD+    S     I  N   
Sbjct: 108 EYGQLPGCPAGFKADDKLIAAAEACIAELNLNAVRGLIVSGDAFINGSVGLAKIRHNFPQ 167

Query: 182 ATIKDMEVRAEF 193
           A   +ME  A  
Sbjct: 168 AIAVEMEATAIA 179
>d1t8sa_ c.56.2.1 (A:) AMP nucleosidase {Escherichia coli [TaxId: 562]} Length = 477 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query193
d1jysa_230 5'-Methylthioadenosine/S-Adenosylhomocysteine nucl 100.0
d1rxya_250 Uridine phosphorylase {Escherichia coli [TaxId: 56 99.97
d1je0a_234 5'-deoxy-5'-methylthioadenosine phosphorylase {Arc 99.96
d2ac7a1231 Purine nucleoside phosphorylase, PNP {Bacillus ant 99.96
d1vhwa_237 Purine nucleoside phosphorylase, PNP {Vibrio chole 99.96
d1q1ga_243 Putative uridine phosphorylase {Plasmodium falcipa 99.95
d1odka_234 Purine nucleoside phosphorylase, PNP {Thermus ther 99.95
d1ybfa_246 AMP nucleosidase {Bacteroides thetaiotaomicron [Ta 99.91
d1t8sa_477 AMP nucleosidase {Escherichia coli [TaxId: 562]} 99.88
d1vmka_265 Purine nucleoside phosphorylase, PNP {Thermotoga m 98.27
d1g2oa_262 Purine nucleoside phosphorylase, PNP {Mycobacteriu 98.05
d1v4na_266 5'-deoxy-5'-methylthioadenosine phosphorylase {Sul 97.94
d1cb0a_273 5'-deoxy-5'-methylthioadenosine phosphorylase {Hum 97.79
d3pnpa_284 Purine nucleoside phosphorylase, PNP {Cow (Bos tau 97.59
d1qe5a_266 Purine nucleoside phosphorylase, PNP {Cellulomonas 97.54
>d1jysa_ c.56.2.1 (A:) 5'-Methylthioadenosine/S-Adenosylhomocysteine nucleosidase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Purine and uridine phosphorylases
family: Purine and uridine phosphorylases
domain: 5'-Methylthioadenosine/S-Adenosylhomocysteine nucleosidase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=3.3e-33  Score=224.95  Aligned_cols=163  Identities=26%  Similarity=0.366  Sum_probs=140.2

Q ss_pred             ceEEEEeecHHHHHHHHHhccccccCCCCCCCCCCeEEEEEEECCEeEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHh
Q 029435           13 SSVVIIIAMQTEAMPLVNKFELKEDQDSVFPEGVPWVRYHGTYKDLHLNIIWPGKDTSLEVDSVGTISASLVTYASIQAL   92 (193)
Q Consensus        13 ~~i~Ii~A~~~E~~~l~~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~G~~~~~~~~~iG~v~Aa~~~~~li~~~   92 (193)
                      |+|+||+||+.|++++++.|...+...     .++++||+|+++|++|+++.+|         ||++|||.+++.|+++|
T Consensus         1 m~IgIi~Al~~E~~~l~~~l~~~~~~~-----~~~~~~~~g~~~g~~v~v~~~G---------~G~~~aa~~~~~li~~~   66 (230)
T d1jysa_           1 MKIGIIGAMEEEVTLLRDKIENRQTIS-----LGGCEIYTGQLNGTEVALLKSG---------IGKVAAALGATLLLEHC   66 (230)
T ss_dssp             CEEEEEESCHHHHHHHHHHCEEEEEEE-----ETTEEEEEEEETTEEEEEEECC---------SSHHHHHHHHHHHHHHH
T ss_pred             CEEEEEeeCHHHHHHHHHhcccCeEEE-----eCCeEEEEEEECCEEEEEEECC---------CChhHHHHHHHHHHHhc
Confidence            579999999999999999998877653     4679999999999999999999         99999999999999999


Q ss_pred             CCCEEEEEeeeCccCCCCCCcccEEEecceeEecCCCCccCccccCCCCCCCCC-----Chhhh---------cCCceeE
Q 029435           93 KPDLIINAGTAGGFKAKGASIGDVFLISDVAFHDRRIPIPVFDLYGVGQRQAFS-----TPNLL---------RELNLKV  158 (193)
Q Consensus        93 ~~~~vi~~G~aG~l~~~~~~iGDvvi~~~~~~~d~~~~~~~f~~~~~~~~p~~~-----~~~L~---------~~~~~~~  158 (193)
                      +|+.||++|+|||++ +++++||++++++++++|.+.+  .| .+..+++|..+     ++.|.         .+++++.
T Consensus        67 ~~~~ii~~G~aG~l~-~~~~~Gdvvi~~~~~~~~~~~~--~~-~~~~~~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  142 (230)
T d1jysa_          67 KPDVIINTGSAGGLA-PTLKVGDIVVSDEARYHDADVT--AF-GYEYGQLPGCPAGFKADDKLIAAAEACIAELNLNAVR  142 (230)
T ss_dssp             CCSEEEEEEEEEECS-TTCCTTCEEEEEEEEETTCBCG--GG-TCCTTCCTTSCSSEECCHHHHHHHHHHHHHTTCCEEE
T ss_pred             CCcEEEEecccCCcc-ccccCCCEEEEeEEEEeccccc--cc-ccccceeccceecccCCHHHHHHHHHHHHhcCCCeeE
Confidence            999999999999999 8999999999999999987654  33 24455555432     23331         3678999


Q ss_pred             EEEEeccceecChHhHHHHHh-C-CCeEEcccccccC
Q 029435          159 CKLSTGDSLDMSSQDETSITA-N-DATIKDMEVRAEF  193 (193)
Q Consensus       159 G~i~T~d~~i~~~~~~~~l~~-~-~~~~vDME~aAi~  193 (193)
                      |+++|+|.|+.+.+.++++++ + +++++|||+||++
T Consensus       143 g~~~t~~~~~~~~~~~~~l~~~~~~a~~vdME~aa~a  179 (230)
T d1jysa_         143 GLIVSGDAFINGSVGLAKIRHNFPQAIAVEMEATAIA  179 (230)
T ss_dssp             EEEEECSBCCCSHHHHHHHHHHCTTEEEEESSHHHHH
T ss_pred             eEEeccCceeechHHHHHHHHhcccceeeechHHHHH
Confidence            999999999999888888775 4 9999999999973
>d1rxya_ c.56.2.1 (A:) Uridine phosphorylase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1je0a_ c.56.2.1 (A:) 5'-deoxy-5'-methylthioadenosine phosphorylase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Back     information, alignment and structure
>d2ac7a1 c.56.2.1 (A:2-232) Purine nucleoside phosphorylase, PNP {Bacillus anthracis [TaxId: 1392]} Back     information, alignment and structure
>d1vhwa_ c.56.2.1 (A:) Purine nucleoside phosphorylase, PNP {Vibrio cholerae [TaxId: 666]} Back     information, alignment and structure
>d1q1ga_ c.56.2.1 (A:) Putative uridine phosphorylase {Plasmodium falciparum [TaxId: 5833]} Back     information, alignment and structure
>d1odka_ c.56.2.1 (A:) Purine nucleoside phosphorylase, PNP {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1ybfa_ c.56.2.1 (A:) AMP nucleosidase {Bacteroides thetaiotaomicron [TaxId: 818]} Back     information, alignment and structure
>d1t8sa_ c.56.2.1 (A:) AMP nucleosidase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1vmka_ c.56.2.1 (A:) Purine nucleoside phosphorylase, PNP {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1g2oa_ c.56.2.1 (A:) Purine nucleoside phosphorylase, PNP {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1v4na_ c.56.2.1 (A:) 5'-deoxy-5'-methylthioadenosine phosphorylase {Sulfolobus tokodaii [TaxId: 111955]} Back     information, alignment and structure
>d1cb0a_ c.56.2.1 (A:) 5'-deoxy-5'-methylthioadenosine phosphorylase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d3pnpa_ c.56.2.1 (A:) Purine nucleoside phosphorylase, PNP {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1qe5a_ c.56.2.1 (A:) Purine nucleoside phosphorylase, PNP {Cellulomonas sp. [TaxId: 40001]} Back     information, alignment and structure