Citrus Sinensis ID: 029440

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190---
Protein Sequence
MGFVELVKSVNWEQESYPAYEDFAVLPLFALYFPSVRFFLEKFVFEKVAKRWIFGKGHHMLDFKTSERKKKIRKFNESAWKCVYFLTAELLALSVTYDEPWFKNTRCFWVGPGNQVWPDQKIKLKLKGVYMYAAGFYTYSIFALMFWETRRADFGVSMGHHVATVILIVLSYIFRFALIQFCYCLLFFWLLTL
Secondary Structure (PSIPRED)
cccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
cccHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
MGFVELVKSvnweqesypayedfavlplfalyfpsVRFFLEKFVFEKVAKRWIfgkghhmldfkTSERKKKIRKFNESAWKCVYFLTAELLALSvtydepwfkntrcfwvgpgnqvwpdqkikLKLKGVYMYAAGFYTYSIFALMFWETRRadfgvsmgHHVATVILIVLSYIFRFALIQFCYCLLFFWLLTL
Flexible Loop (DISEMBL)
MGFVELVKSVNWEQESYPAYEDFAVLPLFALYFPSVRFFLEKFVFEKVAKRWifgkghhmldfktserkKKIRKFNESAWKCVYFLTAELLALSVTYDEPWFKNTRCFWVGPGNQVWPDQKIKLKLKGVYMYAAGFYTYSIFALMFWETRRADFGVSMGHHVATVILIVLSYIFRFALIQFCYCLLFFWLLTL
Low Complexity Region (SEG)
MGFVELVKSVNWEQESYPAYEDFAVLPLFALYFPSVRFFLEKFVFEKVAKRWIFGKGHHMLDFKTSERKKKIRKFNESAWKCVYFLTAELLALSVTYDEPWFKNTRCFWVGPGNQVWPDQKIKLKLKGVYMYAAGFYTYSIFALMFWETRRADFGVSMGHHVATVILIVLSYIFRFALIQFCYCLLFFWLLTL
Disordered region (IsUnstruct)
**FVELVKSVNWEQESYPAYEDFAVLPLFALYFPSVRFFLEKFVFEKVAKRWIFGKGHHMLDFKTSERKKKIRKFNESAWKCVYFLTAELLALSVTYDEPWFKNTRCFWVGPGNQVWPDQKIKLKLKGVYMYAAGFYTYSIFALMFWETRRADFGVSMGHHVATVILIVLSYIFRFALIQFCYCLLFFWLLT*
Disordered Region (DISOPRED)
*GFV**VKSVNWEQESYPAYEDFAVLPLFALYFPSVRFFLEKFVFEKVAKRWIFGKGH************KIRKFNESAWKCVYFLTAELLALSVTYDEPWFKNTRCFWVGPGNQVWPDQKIKLKLKGVYMYAAGFYTYSIFALMFWETRRADFGVSMGHHVATVILIVLSYIFRFALIQFCYCLLFFWLLTL
Disordered Region (DISEMBL)
MGFVELVKSVNWEQESYPAYEDFAVLPLFALYFPSVRFFLEKFVFEKVAKRWIFGKGHHMLDFKTSERKKKIRKFNESAWKCVYFLTAELLALSVTYDEPWFKNTRCFWVGPGNQVWPDQKIKLKLKGVYMYAAGFYTYSIFALMFWETRRADFGVSMGHHVATVILIVLSYIFRFALIQFCYCLLFFWLLTL
Disordered Region (DISPRO)
*****LVKSVNWEQESYPAYEDFAVLPLFALYFPSVRFFLEKFVFEKVAKRWIFGKGHHM****TSERKKKIRKFNESAWKCVYFLTAELLALSVTYDEPWFKNTRCFWVGPGNQVWPDQKIKLKLKGVYMYAAGFYTYSIFALMFWETRRADFGVSMGHHVATVILIVLSYIFRFALIQFCYCLLFFWLLTL
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHii
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGFVELVKSVNWEQESYPAYEDFAVLPLFALYFPSVRFFLEKFVFEKVAKRWIFGKGHHMLDFKTSERKKKIRKFNESAWKCVYFLTAELLALSVTYDEPWFKNTRCFWVGPGNQVWPDQKIKLKLKGVYMYAAGFYTYSIFALMFWETRRADFGVSMGHHVATVILIVLSYIFRFALIQFCYCLLFFWLLTL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	193	2.2.26 [Sep-21-2011]
Q6NQI8	308	LAG1 longevity assurance	yes	no	0.927	0.581	0.698	9e-73
Q8W4Y5	303	ASC1-like protein OS=Sola	N/A	no	0.880	0.561	0.723	7e-72
Q6EUN0	309	ASC1-like protein 1 OS=Or	yes	no	0.870	0.543	0.711	2e-67
Q9LDF2	310	LAG1 longevity assurance	no	no	0.917	0.570	0.638	1e-66
Q6YWS8	303	ASC1-like protein 2 OS=Or	no	no	0.891	0.567	0.676	3e-63
Q9M6A3	308	Protein ASC1 OS=Solanum l	N/A	no	0.896	0.561	0.603	3e-44
Q9LJK3	296	LAG1 longevity assurance	no	no	0.865	0.564	0.36	4e-25
Q84QC0	284	ASC1-like protein 3 OS=Or	no	no	0.761	0.517	0.383	3e-21
Q924Z4	380	Ceramide synthase 2 OS=Mu	yes	no	0.533	0.271	0.330	4e-10
Q3ZBF8	380	Ceramide synthase 2 OS=Bo	yes	no	0.533	0.271	0.321	5e-09

>sp|Q6NQI8|LAG13_ARATH LAG1 longevity assurance homolog 3 OS=Arabidopsis thaliana GN=At1g13580 PE=2 SV=2

 Score =  272 bits (696), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 125/179 (69%), Positives = 153/179 (85%)

Query: 1   MGFVELVKSVNWEQESYPAYEDFAVLPLFALYFPSVRFFLEKFVFEKVAKRWIFGKGHHM 60
           MG +E VKS+NWE ES P Y+DF VLPLFA++FPS+RF L++FVFEK+AK  I+GK    
Sbjct: 1   MGLLESVKSINWEHESSPVYQDFRVLPLFAVFFPSIRFLLDRFVFEKLAKYLIYGKHRQD 60

Query: 61  LDFKTSERKKKIRKFNESAWKCVYFLTAELLALSVTYDEPWFKNTRCFWVGPGNQVWPDQ 120
           +   T+ERKKKIRKF ESAWKCVY+L+AE+LALSVTY+EPWF NT+ FWVGPG+Q WPDQ
Sbjct: 61  MGDDTTERKKKIRKFKESAWKCVYYLSAEILALSVTYNEPWFMNTKYFWVGPGDQTWPDQ 120

Query: 121 KIKLKLKGVYMYAAGFYTYSIFALMFWETRRADFGVSMGHHVATVILIVLSYIFRFALI 179
           + KLKLK +YM+ AGFYTYSIFAL+FWETRR+DFGVSMGHH+AT+ILIVLSY+  F+ +
Sbjct: 121 QTKLKLKLLYMFVAGFYTYSIFALVFWETRRSDFGVSMGHHIATLILIVLSYVCSFSRV 179

Mediates resistance to sphinganine-analog mycotoxins (SAMs) by restoring the sphingolipid biosynthesis. Could salvage the transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi apparatus in ceramides-depleted cells after SAM exposure.
Arabidopsis thaliana (taxid: 3702)

>sp|Q8W4Y5|ASCL_SOLLC ASC1-like protein OS=Solanum lycopersicum PE=2 SV=1

 Score =  269 bits (688), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 123/170 (72%), Positives = 147/170 (86%)

Query: 10  VNWEQESYPAYEDFAVLPLFALYFPSVRFFLEKFVFEKVAKRWIFGKGHHMLDFKTSERK 69
           ++WE ESYP+YEDFAVLPLFAL+FPSVRF L++FVFEKVA+R IFGKG  +++ +T +R+
Sbjct: 9   LDWEYESYPSYEDFAVLPLFALFFPSVRFLLDRFVFEKVARRLIFGKGQEVVENETDDRR 68

Query: 70  KKIRKFNESAWKCVYFLTAELLALSVTYDEPWFKNTRCFWVGPGNQVWPDQKIKLKLKGV 129
           ++IRKF ESAWKC+YFL+AE+ AL VTY+EPWF NTR FWVGPG+QVWPDQ  K KLK +
Sbjct: 69  RRIRKFKESAWKCIYFLSAEVFALVVTYNEPWFTNTRYFWVGPGDQVWPDQMYKSKLKAL 128

Query: 130 YMYAAGFYTYSIFALMFWETRRADFGVSMGHHVATVILIVLSYIFRFALI 179
           YMY  GFYTYSIFAL+FWETRR+DFGVSM HHVAT ILIVLSY  RFA +
Sbjct: 129 YMYTGGFYTYSIFALIFWETRRSDFGVSMSHHVATAILIVLSYNIRFARV 178

Mediates resistance to sphinganine-analog mycotoxins (SAMs) by restoring the sphingolipid biosynthesis. Could salvage the transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi apparatus in ceramides-depleted cells after SAM exposure.

Solanum lycopersicum (taxid: 4081)

>sp|Q6EUN0|ASCL1_ORYSJ ASC1-like protein 1 OS=Oryza sativa subsp. japonica GN=Os02g0581300 PE=2 SV=1

 Score =  254 bits (649), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 121/170 (71%), Positives = 144/170 (84%), Gaps = 2/170 (1%)

Query: 10  VNWEQESYPAYEDFAVLPLFALYFPSVRFFLEKFVFEKVAKRWIFGKGHHMLDFKTSERK 69
           V+WE+E+YPAY DF  LPLFA++F  VR+ L+ FVFE + ++ IFGK    +D++  E +
Sbjct: 14  VDWEREAYPAYRDFFALPLFAVFFLVVRYLLDCFVFEWIGRKLIFGK--EKVDYEKEETR 71

Query: 70  KKIRKFNESAWKCVYFLTAELLALSVTYDEPWFKNTRCFWVGPGNQVWPDQKIKLKLKGV 129
           KKIRKF ESAWKCVYFL+ E+L+LSVTY+EPWF NT+ FWVGPG+QVWPDQKIK KLK V
Sbjct: 72  KKIRKFKESAWKCVYFLSGEILSLSVTYNEPWFTNTKYFWVGPGDQVWPDQKIKWKLKAV 131

Query: 130 YMYAAGFYTYSIFALMFWETRRADFGVSMGHHVATVILIVLSYIFRFALI 179
           YMYAAGFYTYSIFALMFWETRR+DFGVSM HHVATV LIVLSY+FRFA +
Sbjct: 132 YMYAAGFYTYSIFALMFWETRRSDFGVSMSHHVATVALIVLSYVFRFARV 181

Mediates resistance to sphinganine-analog mycotoxins (SAMs) by restoring the sphingolipid biosynthesis. Could salvage the transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi apparatus in ceramides-depleted cells after SAM exposure.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9LDF2|LAG11_ARATH LAG1 longevity assurance homolog 1 OS=Arabidopsis thaliana GN=LAG1 PE=1 SV=1

 Score =  252 bits (644), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 115/180 (63%), Positives = 146/180 (81%), Gaps = 3/180 (1%)

Query: 1   MGFVELVKSVNWEQESYPAYEDFAVLPLFALYFPSVRFFLEKFVFEKVAKRWIFGKGHHM 60
           MG  E VKS++WEQES+P Y+D   LPLFA++FP++RF L++FVFEK+A   I+G+    
Sbjct: 1   MGLFESVKSIDWEQESFPTYQDLGFLPLFAVFFPTIRFLLDRFVFEKLASLVIYGRMSTN 60

Query: 61  LDFKTSERKK---KIRKFNESAWKCVYFLTAELLALSVTYDEPWFKNTRCFWVGPGNQVW 117
                 +RKK   K+RKF ESAWKC+Y+L+AELLALSVTY+EPWF NT  FW+GPG+Q+W
Sbjct: 61  KSDNIKDRKKNSPKVRKFKESAWKCIYYLSAELLALSVTYNEPWFSNTLYFWIGPGDQIW 120

Query: 118 PDQKIKLKLKGVYMYAAGFYTYSIFALMFWETRRADFGVSMGHHVATVILIVLSYIFRFA 177
           PDQ +K+KLK +YM+AAGFYTYSIFAL+FWETRR+DFGVSMGHH+ T++LIVLSYI R  
Sbjct: 121 PDQPMKMKLKFLYMFAAGFYTYSIFALVFWETRRSDFGVSMGHHITTLVLIVLSYICRLT 180

Mediates resistance to sphinganine-analog mycotoxins (SAMs) by restoring the sphingolipid biosynthesis. Could salvage the transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi apparatus in ceramides-depleted cells after SAM exposure.

Arabidopsis thaliana (taxid: 3702)

>sp|Q6YWS8|ASCL2_ORYSJ ASC1-like protein 2 OS=Oryza sativa subsp. japonica GN=Os02g0728300 PE=3 SV=2

 Score =  241 bits (614), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 117/173 (67%), Positives = 139/173 (80%), Gaps = 1/173 (0%)

Query: 7   VKSVNWEQESYPAYEDFAVLPLFALYFPSVRFFLEKFVFEKVAKRWIFGKGHHMLDFKTS 66
           V  V+WE ESYPAY DFA +PLFA++  +VR+ L++FVFE +A+R IF K    LD  T 
Sbjct: 3   VPPVDWEAESYPAYSDFAAIPLFAVFLFAVRYLLDRFVFEWLARRLIFEKDEK-LDLATH 61

Query: 67  ERKKKIRKFNESAWKCVYFLTAELLALSVTYDEPWFKNTRCFWVGPGNQVWPDQKIKLKL 126
             + KIRKF ESAWKC+YFL+AELLALSVTY E WF +T+ FWVGPG+QVWPDQ+IK KL
Sbjct: 62  AGRIKIRKFKESAWKCIYFLSAELLALSVTYKESWFTSTKNFWVGPGDQVWPDQRIKFKL 121

Query: 127 KGVYMYAAGFYTYSIFALMFWETRRADFGVSMGHHVATVILIVLSYIFRFALI 179
           K VYMYAAGFYTYSIFAL FWE +R+DFG+SM HHV +VILI LSYIFRFA +
Sbjct: 122 KLVYMYAAGFYTYSIFALQFWEIKRSDFGISMVHHVVSVILIALSYIFRFARV 174

Mediates resistance to sphinganine-analog mycotoxins (SAMs) by restoring the sphingolipid biosynthesis. Could salvage the transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi apparatus in ceramides-depleted cells after SAM exposure.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9M6A3|ASC1_SOLLC Protein ASC1 OS=Solanum lycopersicum GN=Asc-1 PE=2 SV=2

 Score =  177 bits (450), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 105/174 (60%), Positives = 131/174 (75%), Gaps = 1/174 (0%)

Query: 6   LVKSVNWEQESYPAYEDFAVLPLFALYFPSVRFFLEKFVFEKVAKRWIFGKGHHMLDFKT 65
           +  SV+WE+ES P Y+D   L  FAL+FP +RF L++FVFE +AKR IFGK   +++   
Sbjct: 7   IAASVDWEKESLPEYQDLIFLLFFALFFPVLRFILDRFVFEALAKRMIFGK-KTVVNING 65

Query: 66  SERKKKIRKFNESAWKCVYFLTAELLALSVTYDEPWFKNTRCFWVGPGNQVWPDQKIKLK 125
            E +KKI KF ESAWK VYFL+AELLALSVT +EPWF ++R FW GPG+ VWP+ K+KLK
Sbjct: 66  REERKKINKFKESAWKFVYFLSAELLALSVTCNEPWFTDSRYFWAGPGDVVWPNLKMKLK 125

Query: 126 LKGVYMYAAGFYTYSIFALMFWETRRADFGVSMGHHVATVILIVLSYIFRFALI 179
           LK +YMYA GFY YSIFA ++WETRR DF   + HHV TV LIVLSY++ FA I
Sbjct: 126 LKLLYMYAGGFYFYSIFATLYWETRRYDFAAQIIHHVTTVSLIVLSYVYGFARI 179

Mediates resistance to sphinganine-analog mycotoxins (SAMs) by restoring the sphingolipid biosynthesis. Could salvage the transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi apparatus in ceramides-depleted cells after SAM exposure.

Solanum lycopersicum (taxid: 4081)

>sp|Q9LJK3|LAG12_ARATH LAG1 longevity assurance homolog 2 OS=Arabidopsis thaliana GN=LAG2 PE=1 SV=1

 Score =  114 bits (285), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 63/175 (36%), Positives = 95/175 (54%), Gaps = 8/175 (4%)

Query: 4   VELVKSVNWEQESYPAYE--DFAVLPLFALYFPSVRFFLEKFVFEKVAKRWIFGKGHHML 61
           +E V S   +    P+ E   F +   FA  F  +R  L+++VF+++A  W+   G   +
Sbjct: 1   MESVSSRGGDPVVKPSMEVWHFQIAVYFAFGFFFLRLVLDRYVFQRIA-LWLLSTGSAPI 59

Query: 62  DFKTSERKKKIRKFNESAWKCVYFLTAELLALSVTYDEPWFKNTRCFWVGPGNQVWPDQK 121
               +  + KI K  ES WK +Y+   +   L V Y EPW ++ + ++ G     WP+Q+
Sbjct: 60  KLNDAATRAKIVKCKESLWKLLYYAACDFFVLQVIYHEPWARDIKLYFHG-----WPNQE 114

Query: 122 IKLKLKGVYMYAAGFYTYSIFALMFWETRRADFGVSMGHHVATVILIVLSYIFRF 176
           +KL +K  YM   GFY Y + AL+ WETRR DF V M HHV T+IL+  SY+  F
Sbjct: 115 LKLSIKLYYMCQCGFYVYGVAALLAWETRRKDFAVMMSHHVITIILLSYSYLTSF 169

Mediates resistance to sphinganine-analog mycotoxins (SAMs) by restoring the sphingolipid biosynthesis. Could salvage the transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi apparatus in ceramides-depleted cells after SAM exposure.

Arabidopsis thaliana (taxid: 3702)

>sp|Q84QC0|ASCL3_ORYSJ ASC1-like protein 3 OS=Oryza sativa subsp. japonica GN=Os03g0264000 PE=2 SV=1

 Score =  101 bits (252), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 59/154 (38%), Positives = 86/154 (55%), Gaps = 7/154 (4%)

Query: 23  FAVLPLFALYFPSVRFFLEKFVFEKVAKRWIFGKGHHMLDFKTSERKKKIRKFNESAWKC 82
           F +  +F++ F   RFFL++ V++ +A      K   +++ +   R+ KI KF+ES WK 
Sbjct: 12  FPLTLVFSVGFFCARFFLDRLVYKPLAAYCFSSKASKLMNDEV--RQAKIVKFSESIWKL 69

Query: 83  VYFLTAELLALSVTYDEPWFKNTRCFWVGPGNQVWPDQKIKLKLKGVYMYAAGFYTYSIF 142
            Y+ + +   L +   EPW  +T  ++ G     WP+Q +   L   YM   GFY YSIF
Sbjct: 70  TYYGSVQAWVLLIIKQEPWSLDTMQYFEG-----WPNQYMTSSLMLFYMCQCGFYIYSIF 124

Query: 143 ALMFWETRRADFGVSMGHHVATVILIVLSYIFRF 176
           AL+ WETRR DF V M HHV T ILI  +Y+  F
Sbjct: 125 ALVAWETRRKDFAVMMSHHVVTSILIGYAYLTGF 158

Mediates resistance to sphinganine-analog mycotoxins (SAMs) by restoring the sphingolipid biosynthesis. Could salvage the transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi apparatus in ceramides-depleted cells after SAM exposure.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q924Z4|CERS2_MOUSE Ceramide synthase 2 OS=Mus musculus GN=Cers2 PE=1 SV=1

 Score = 64.7 bits (156), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 59/109 (54%), Gaps = 6/109 (5%)

Query: 64  KTSERKKKIRKFNESAWKCVYFLTAELLALSVTYDEPWFKNTRCFWVGPGNQVWPDQKIK 123
           +  +R   ++KF E++W+  Y+L A +  ++VT D+PWF + R  W G     +P Q I 
Sbjct: 122 RNQDRPSLLKKFREASWRFTYYLIAFVAGMAVTVDKPWFYDLRKVWEG-----YPIQSII 176

Query: 124 LKLKGVYMYAAGFYTYSIFALMFWETRRADFGVSMGHHVATVILIVLSY 172
                 YM    FY   +F++   + +R DF   + HHVAT+IL+  S+
Sbjct: 177 PSQYWYYMIELSFYWSLLFSIAS-DVKRKDFKEQIIHHVATIILLCFSW 224

Suppresses the growth of cancer cells. May be involved in sphingolipid synthesis.

Mus musculus (taxid: 10090)

>sp|Q3ZBF8|CERS2_BOVIN Ceramide synthase 2 OS=Bos taurus GN=CERS2 PE=2 SV=1

 Score = 60.8 bits (146), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 57/109 (52%), Gaps = 6/109 (5%)

Query: 64  KTSERKKKIRKFNESAWKCVYFLTAELLALSVTYDEPWFKNTRCFWVGPGNQVWPDQKIK 123
           +  +R   ++KF E++W+  ++L A +   +V  D+PWF + R  W G     +P Q I 
Sbjct: 122 RNQDRPSLLKKFREASWRFTFYLIAFIAGTAVIVDKPWFYDLRKVWEG-----YPIQSII 176

Query: 124 LKLKGVYMYAAGFYTYSIFALMFWETRRADFGVSMGHHVATVILIVLSY 172
                 YM    FY   +F++   + +R DF   + HHVAT+ILI  S+
Sbjct: 177 PSQYWYYMIELSFYWSLLFSIAS-DVKRKDFKEQIIHHVATIILISFSW 224

Suppresses the growth of cancer cells. May be involved in sphingolipid synthesis.

Bos taurus (taxid: 9913)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	193
356558997	311	PREDICTED: ASC1-like protein-like [Glyci	0.886	0.549	0.783	7e-77
356526703	309	PREDICTED: ASC1-like protein-like [Glyci	0.886	0.553	0.783	1e-76
255641859	231	unknown [Glycine max]	0.906	0.757	0.765	4e-76
224111810	308	predicted protein [Populus trichocarpa]	0.917	0.574	0.757	6e-76
449463529	308	PREDICTED: LAG1 longevity assurance homo	0.927	0.581	0.731	2e-75
388520361	310	unknown [Lotus japonicus]	0.927	0.577	0.720	2e-75
118488350	308	unknown [Populus trichocarpa]	0.927	0.581	0.743	3e-75
224099287	308	predicted protein [Populus trichocarpa]	0.927	0.581	0.743	4e-75
147856172	237	hypothetical protein VITISV_031617 [Viti	0.927	0.755	0.731	8e-74
413937490	489	ASC1-like protein 1 [Zea mays]	0.927	0.366	0.715	2e-72

>gi|356558997|ref|XP_003547788.1| PREDICTED: ASC1-like protein-like [Glycine max]

 Score =  291 bits (746), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 134/171 (78%), Positives = 154/171 (90%)

Query: 9   SVNWEQESYPAYEDFAVLPLFALYFPSVRFFLEKFVFEKVAKRWIFGKGHHMLDFKTSER 68
           S++W  ESYPAY DF +LP+FAL+FPS+RFFL++F+FEKVA+R IFGKGH  LD++T ER
Sbjct: 10  SLDWHNESYPAYHDFYLLPIFALFFPSLRFFLDRFIFEKVARRLIFGKGHAALDYQTDER 69

Query: 69  KKKIRKFNESAWKCVYFLTAELLALSVTYDEPWFKNTRCFWVGPGNQVWPDQKIKLKLKG 128
           +KKI KF ESAWKCVY+L+AE+LALSVTYDEPWF NT  FWVGPG QVWPDQKIKLKLK 
Sbjct: 70  RKKISKFKESAWKCVYYLSAEILALSVTYDEPWFTNTINFWVGPGTQVWPDQKIKLKLKA 129

Query: 129 VYMYAAGFYTYSIFALMFWETRRADFGVSMGHHVATVILIVLSYIFRFALI 179
           VYMYAAGFY+YSIFAL+FWETRR+DFGVSM HHVATVILIVLSYIFRFA +
Sbjct: 130 VYMYAAGFYSYSIFALIFWETRRSDFGVSMSHHVATVILIVLSYIFRFARV 180

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356526703|ref|XP_003531956.1| PREDICTED: ASC1-like protein-like [Glycine max]

 Score =  291 bits (744), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 134/171 (78%), Positives = 153/171 (89%)

Query: 9   SVNWEQESYPAYEDFAVLPLFALYFPSVRFFLEKFVFEKVAKRWIFGKGHHMLDFKTSER 68
           S++W  E YP Y DF +LPLFAL+FPS+RFFL++F+FEKVA+R IFGKGH  LD+ + ER
Sbjct: 10  SLDWHNEFYPTYHDFYLLPLFALFFPSLRFFLDRFIFEKVARRLIFGKGHAALDYHSDER 69

Query: 69  KKKIRKFNESAWKCVYFLTAELLALSVTYDEPWFKNTRCFWVGPGNQVWPDQKIKLKLKG 128
           +KKIRKF ESAWKCVY+L+AE+LALSVTYDEPWF NTR FWVGPG QVWPDQKIKLKLK 
Sbjct: 70  RKKIRKFKESAWKCVYYLSAEILALSVTYDEPWFTNTRNFWVGPGTQVWPDQKIKLKLKA 129

Query: 129 VYMYAAGFYTYSIFALMFWETRRADFGVSMGHHVATVILIVLSYIFRFALI 179
           VYMYAAGFY+YSIFAL+FWETRR+DFGVSM HHVATVILIVLSYIFRFA +
Sbjct: 130 VYMYAAGFYSYSIFALIFWETRRSDFGVSMSHHVATVILIVLSYIFRFARV 180

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255641859|gb|ACU21198.1| unknown [Glycine max]

 Score =  289 bits (740), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 134/175 (76%), Positives = 154/175 (88%)

Query: 5   ELVKSVNWEQESYPAYEDFAVLPLFALYFPSVRFFLEKFVFEKVAKRWIFGKGHHMLDFK 64
            L  S++W  ESYPAY DF +LP+FAL+FPS+RFFL++F+FEKVA+R IFGKGH  LD++
Sbjct: 6   SLSLSLDWHNESYPAYHDFYLLPIFALFFPSLRFFLDRFIFEKVARRLIFGKGHAALDYQ 65

Query: 65  TSERKKKIRKFNESAWKCVYFLTAELLALSVTYDEPWFKNTRCFWVGPGNQVWPDQKIKL 124
           T ER+KKI KF ESAWKCVY+L+AE+LALSVTYDEPWF NT  FWVGP  QVWPDQKIKL
Sbjct: 66  TDERRKKISKFKESAWKCVYYLSAEILALSVTYDEPWFTNTINFWVGPRTQVWPDQKIKL 125

Query: 125 KLKGVYMYAAGFYTYSIFALMFWETRRADFGVSMGHHVATVILIVLSYIFRFALI 179
           KLK VYMYAAGFY+YSIFAL+FWETRR+DFGVSM HHVATVILIVLSYIFRFA +
Sbjct: 126 KLKAVYMYAAGFYSYSIFALIFWETRRSDFGVSMSHHVATVILIVLSYIFRFARV 180

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224111810|ref|XP_002315985.1| predicted protein [Populus trichocarpa] gi|222865025|gb|EEF02156.1| predicted protein [Populus trichocarpa]

 Score =  288 bits (738), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 134/177 (75%), Positives = 154/177 (87%)

Query: 1   MGFVELVKSVNWEQESYPAYEDFAVLPLFALYFPSVRFFLEKFVFEKVAKRWIFGKGHHM 60
           MGF+E  KS+ WE ESYPAYED+ VLPLF+L+F  VRFFL++FVF+K+A+R IFGK H M
Sbjct: 1   MGFMEYAKSIQWEHESYPAYEDYIVLPLFSLFFTFVRFFLDRFVFQKLAQRLIFGKEHQM 60

Query: 61  LDFKTSERKKKIRKFNESAWKCVYFLTAELLALSVTYDEPWFKNTRCFWVGPGNQVWPDQ 120
           LD +  ER+KKI KF ESAWKC+YFL+AE+L L VTYDEPWF NT+ FWVGPG+QVWPDQ
Sbjct: 61  LDAQPDERRKKIGKFKESAWKCIYFLSAEILVLYVTYDEPWFGNTKYFWVGPGSQVWPDQ 120

Query: 121 KIKLKLKGVYMYAAGFYTYSIFALMFWETRRADFGVSMGHHVATVILIVLSYIFRFA 177
           K+KLKLKG YMYAAGFYTYSIFAL+FWETRR+DFGVSM HHVATVILIVLSYI RF 
Sbjct: 121 KMKLKLKGAYMYAAGFYTYSIFALIFWETRRSDFGVSMSHHVATVILIVLSYILRFG 177

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449463529|ref|XP_004149486.1| PREDICTED: LAG1 longevity assurance homolog 3-like [Cucumis sativus] gi|449515623|ref|XP_004164848.1| PREDICTED: LAG1 longevity assurance homolog 3-like [Cucumis sativus]

 Score =  286 bits (733), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 131/179 (73%), Positives = 156/179 (87%)

Query: 1   MGFVELVKSVNWEQESYPAYEDFAVLPLFALYFPSVRFFLEKFVFEKVAKRWIFGKGHHM 60
           MG +   KS++WE ES+P+YEDF  LP FAL FP+VRFFL++FVFEKV +R IFGKG+ +
Sbjct: 1   MGLIGSFKSIDWELESFPSYEDFTFLPFFALLFPTVRFFLDRFVFEKVGRRLIFGKGYQL 60

Query: 61  LDFKTSERKKKIRKFNESAWKCVYFLTAELLALSVTYDEPWFKNTRCFWVGPGNQVWPDQ 120
            D  T E++KKIRKF ESAWKC+YFL+AELLALSVTY+EPWF +T+ FWVGPG Q+WPDQ
Sbjct: 61  KDVNTDEKRKKIRKFKESAWKCIYFLSAELLALSVTYNEPWFTSTKHFWVGPGEQIWPDQ 120

Query: 121 KIKLKLKGVYMYAAGFYTYSIFALMFWETRRADFGVSMGHHVATVILIVLSYIFRFALI 179
           + KLKLKG+YMYAAGFYTYSIFAL+FWETRR+DFGVSM HHVAT+ILIVLSYIFRFA +
Sbjct: 121 RAKLKLKGLYMYAAGFYTYSIFALIFWETRRSDFGVSMSHHVATLILIVLSYIFRFARV 179

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388520361|gb|AFK48242.1| unknown [Lotus japonicus]

 Score =  286 bits (733), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 129/179 (72%), Positives = 159/179 (88%)

Query: 1   MGFVELVKSVNWEQESYPAYEDFAVLPLFALYFPSVRFFLEKFVFEKVAKRWIFGKGHHM 60
           M ++  + +++W  ESYP Y+DF +LP FAL+FPS+RFFL++F+FE++A+R IFGKG+  
Sbjct: 5   MDWIHRLNTIDWHHESYPDYQDFYLLPCFALFFPSLRFFLDRFLFERMARRLIFGKGNEK 64

Query: 61  LDFKTSERKKKIRKFNESAWKCVYFLTAELLALSVTYDEPWFKNTRCFWVGPGNQVWPDQ 120
           LD++T ER KKIRKF ESAWKC+Y+L+AE+LALSVTYDEPWF +T+ FWVGPG+QVWPDQ
Sbjct: 65  LDYQTDERSKKIRKFKESAWKCIYYLSAEILALSVTYDEPWFTDTKNFWVGPGSQVWPDQ 124

Query: 121 KIKLKLKGVYMYAAGFYTYSIFALMFWETRRADFGVSMGHHVATVILIVLSYIFRFALI 179
           KIKLKLK VYMYAAGFY+YSIFAL+FWETRR+DFGVSM HHVATVILIVLSYIFRFA +
Sbjct: 125 KIKLKLKTVYMYAAGFYSYSIFALIFWETRRSDFGVSMSHHVATVILIVLSYIFRFARV 183

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118488350|gb|ABK95993.1| unknown [Populus trichocarpa]

 Score =  286 bits (732), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 133/179 (74%), Positives = 153/179 (85%)

Query: 1   MGFVELVKSVNWEQESYPAYEDFAVLPLFALYFPSVRFFLEKFVFEKVAKRWIFGKGHHM 60
           MGF+E VKS+ WE ESYP YED  VLPLFAL+FP VRFFL++FVF+KVA+  IFGK H  
Sbjct: 1   MGFMEYVKSIEWEHESYPGYEDCIVLPLFALFFPFVRFFLDRFVFQKVAQDLIFGKEHQT 60

Query: 61  LDFKTSERKKKIRKFNESAWKCVYFLTAELLALSVTYDEPWFKNTRCFWVGPGNQVWPDQ 120
           LD ++ ER+KKIRKF ESAWKC+YFL++E+L L VTYDEPW  NT+ FWVGPG+Q WPDQ
Sbjct: 61  LDVRSDERRKKIRKFKESAWKCIYFLSSEILVLCVTYDEPWLVNTKYFWVGPGSQAWPDQ 120

Query: 121 KIKLKLKGVYMYAAGFYTYSIFALMFWETRRADFGVSMGHHVATVILIVLSYIFRFALI 179
           K+KLKLK VYMYAAGFYTYSIFAL+FWETRR+DFGVSM HHVATVILIVLSYI RF  +
Sbjct: 121 KMKLKLKAVYMYAAGFYTYSIFALIFWETRRSDFGVSMSHHVATVILIVLSYILRFGRV 179

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224099287|ref|XP_002311424.1| predicted protein [Populus trichocarpa] gi|222851244|gb|EEE88791.1| predicted protein [Populus trichocarpa]

 Score =  286 bits (731), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 133/179 (74%), Positives = 153/179 (85%)

Query: 1   MGFVELVKSVNWEQESYPAYEDFAVLPLFALYFPSVRFFLEKFVFEKVAKRWIFGKGHHM 60
           MGF+E VKS+ WE ESYP YED  VLPLFAL+FP VRFFL++FVF+KVA+  IFGK H  
Sbjct: 1   MGFMEYVKSIEWEHESYPGYEDCIVLPLFALFFPFVRFFLDRFVFQKVAQDLIFGKEHQT 60

Query: 61  LDFKTSERKKKIRKFNESAWKCVYFLTAELLALSVTYDEPWFKNTRCFWVGPGNQVWPDQ 120
           LD ++ ER+KKIRKF ESAWKC+YFL++E+L L VTYDEPW  NT+ FWVGPG+Q WPDQ
Sbjct: 61  LDVQSDERRKKIRKFKESAWKCIYFLSSEILVLCVTYDEPWLVNTKYFWVGPGSQAWPDQ 120

Query: 121 KIKLKLKGVYMYAAGFYTYSIFALMFWETRRADFGVSMGHHVATVILIVLSYIFRFALI 179
           K+KLKLK VYMYAAGFYTYSIFAL+FWETRR+DFGVSM HHVATVILIVLSYI RF  +
Sbjct: 121 KMKLKLKAVYMYAAGFYTYSIFALIFWETRRSDFGVSMSHHVATVILIVLSYILRFGRV 179

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147856172|emb|CAN80286.1| hypothetical protein VITISV_031617 [Vitis vinifera]

 Score =  281 bits (720), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 131/179 (73%), Positives = 151/179 (84%)

Query: 1   MGFVELVKSVNWEQESYPAYEDFAVLPLFALYFPSVRFFLEKFVFEKVAKRWIFGKGHHM 60
           MG +E   S+NWE ES+P Y DF  LP+FAL+F SVRFFL++FVF+K+ +  IFGKG   
Sbjct: 1   MGLLESAASINWEHESFPEYGDFVALPVFALFFFSVRFFLDRFVFQKLGRILIFGKGGQQ 60

Query: 61  LDFKTSERKKKIRKFNESAWKCVYFLTAELLALSVTYDEPWFKNTRCFWVGPGNQVWPDQ 120
           LD    E++KK+RKF ESAWKCVY L+AELLALSVTYDEPWF NT+ FWVGPGNQVWPDQ
Sbjct: 61  LDVGVDEKRKKLRKFKESAWKCVYXLSAELLALSVTYDEPWFTNTKYFWVGPGNQVWPDQ 120

Query: 121 KIKLKLKGVYMYAAGFYTYSIFALMFWETRRADFGVSMGHHVATVILIVLSYIFRFALI 179
           +IKLKLKG+YMY  GFYTYSIFAL+FWETRR+DFGVSMGHHVAT ILIVLSYIFRFA +
Sbjct: 121 QIKLKLKGLYMYCGGFYTYSIFALIFWETRRSDFGVSMGHHVATFILIVLSYIFRFARV 179

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|413937490|gb|AFW72041.1| ASC1-like protein 1 [Zea mays]

 Score =  277 bits (708), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 131/183 (71%), Positives = 152/183 (83%), Gaps = 4/183 (2%)

Query: 1   MGFVE----LVKSVNWEQESYPAYEDFAVLPLFALYFPSVRFFLEKFVFEKVAKRWIFGK 56
           MG  E    L+ +V+WE+E+YPAY+DF  LP F L+FP+VRF L++FVF+ VA R I G+
Sbjct: 179 MGLGEAAGRLLAAVDWEREAYPAYDDFLALPAFVLFFPTVRFLLDRFVFKWVAMRLIHGQ 238

Query: 57  GHHMLDFKTSERKKKIRKFNESAWKCVYFLTAELLALSVTYDEPWFKNTRCFWVGPGNQV 116
           GH   +  T E +KKIRKF ESAWKCVYFL+ ELL+LSVTY+EPWF NTR FWVGPG QV
Sbjct: 239 GHQRANNDTEEARKKIRKFKESAWKCVYFLSGELLSLSVTYNEPWFTNTRYFWVGPGEQV 298

Query: 117 WPDQKIKLKLKGVYMYAAGFYTYSIFALMFWETRRADFGVSMGHHVATVILIVLSYIFRF 176
           WPDQKIKLKLK VYMYAAGFYTYSIFALMFWETRR+DFGVSM HHVATV+LIVLSY+FRF
Sbjct: 299 WPDQKIKLKLKAVYMYAAGFYTYSIFALMFWETRRSDFGVSMSHHVATVVLIVLSYVFRF 358

Query: 177 ALI 179
           A +
Sbjct: 359 ARV 361

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	193
TAIR|locus:2010022	308	LAG13 "LAG1 longevity assuranc	0.927	0.581	0.698	2.4e-69
TAIR|locus:2094528	310	LAG1 "AT3G25540" [Arabidopsis	0.906	0.564	0.646	4.8e-66
TAIR|locus:2028771	312	AT1G26200 "AT1G26200" [Arabido	0.896	0.554	0.545	1.8e-52
TAIR|locus:2094133	296	LOH2 "LAG1 homologue 2" [Arabi	0.865	0.564	0.36	3.5e-27
MGI|MGI:1924143	380	Cers2 "ceramide synthase 2" [M	0.554	0.281	0.318	7.7e-15
UNIPROTKB|G3V8V4	380	Lass2 "Protein Lass2" [Rattus	0.554	0.281	0.318	7.7e-15
RGD|1310059	385	Cers2 "ceramide synthase 2" [R	0.554	0.277	0.318	8.3e-15
FB|FBgn0040918	400	schlank "schlank" [Drosophila	0.538	0.26	0.290	9.4e-15
UNIPROTKB|Q5SZE4	249	CERS2 "Ceramide synthase 2" [H	0.554	0.429	0.292	2.1e-14
UNIPROTKB|H0YKH6	223	CERS2 "Ceramide synthase 2" [H	0.528	0.457	0.305	3e-14

TAIR|locus:2010022 LAG13 "LAG1 longevity assurance homolog 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 703 (252.5 bits), Expect = 2.4e-69, P = 2.4e-69
 Identities = 125/179 (69%), Positives = 153/179 (85%)

Query:     1 MGFVELVKSVNWEQESYPAYEDFAVLPLFALYFPSVRFFLEKFVFEKVAKRWIFGKGHHM 60
             MG +E VKS+NWE ES P Y+DF VLPLFA++FPS+RF L++FVFEK+AK  I+GK    
Sbjct:     1 MGLLESVKSINWEHESSPVYQDFRVLPLFAVFFPSIRFLLDRFVFEKLAKYLIYGKHRQD 60

Query:    61 LDFKTSERKKKIRKFNESAWKCVYFLTAELLALSVTYDEPWFKNTRCFWVGPGNQVWPDQ 120
             +   T+ERKKKIRKF ESAWKCVY+L+AE+LALSVTY+EPWF NT+ FWVGPG+Q WPDQ
Sbjct:    61 MGDDTTERKKKIRKFKESAWKCVYYLSAEILALSVTYNEPWFMNTKYFWVGPGDQTWPDQ 120

Query:   121 KIKLKLKGVYMYAAGFYTYSIFALMFWETRRADFGVSMGHHVATVILIVLSYIFRFALI 179
             + KLKLK +YM+ AGFYTYSIFAL+FWETRR+DFGVSMGHH+AT+ILIVLSY+  F+ +
Sbjct:   121 QTKLKLKLLYMFVAGFYTYSIFALVFWETRRSDFGVSMGHHIATLILIVLSYVCSFSRV 179

GO:0016021 "integral to membrane" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0042761 "very long-chain fatty acid biosynthetic process" evidence=IGI

GO:0050291 "sphingosine N-acyltransferase activity" evidence=IGI

GO:0016126 "sterol biosynthetic process" evidence=RCA

GO:0046520 "sphingoid biosynthetic process" evidence=RCA

TAIR|locus:2094528 LAG1 "AT3G25540" [Arabidopsis thaliana (taxid:3702)]

 Score = 652 (234.6 bits), Expect = 4.8e-66, Sum P(2) = 4.8e-66
 Identities = 115/178 (64%), Positives = 146/178 (82%)

Query:     1 MGFVELVKSVNWEQESYPAYEDFAVLPLFALYFPSVRFFLEKFVFEKVAKRWIFGKGHHM 60
             MG  E VKS++WEQES+P Y+D   LPLFA++FP++RF L++FVFEK+A   I+G+    
Sbjct:     1 MGLFESVKSIDWEQESFPTYQDLGFLPLFAVFFPTIRFLLDRFVFEKLASLVIYGRMSTN 60

Query:    61 LDFKTSERKK---KIRKFNESAWKCVYFLTAELLALSVTYDEPWFKNTRCFWVGPGNQVW 117
                   +RKK   K+RKF ESAWKC+Y+L+AELLALSVTY+EPWF NT  FW+GPG+Q+W
Sbjct:    61 KSDNIKDRKKNSPKVRKFKESAWKCIYYLSAELLALSVTYNEPWFSNTLYFWIGPGDQIW 120

Query:   118 PDQKIKLKLKGVYMYAAGFYTYSIFALMFWETRRADFGVSMGHHVATVILIVLSYIFR 175
             PDQ +K+KLK +YM+AAGFYTYSIFAL+FWETRR+DFGVSMGHH+ T++LIVLSYI R
Sbjct:   121 PDQPMKMKLKFLYMFAAGFYTYSIFALVFWETRRSDFGVSMGHHITTLVLIVLSYICR 178

GO:0003674 "molecular_function" evidence=ND

GO:0016021 "integral to membrane" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0016126 "sterol biosynthetic process" evidence=RCA

GO:0046520 "sphingoid biosynthetic process" evidence=RCA

TAIR|locus:2028771 AT1G26200 "AT1G26200" [Arabidopsis thaliana (taxid:3702)]

 Score = 524 (189.5 bits), Expect = 1.8e-52, Sum P(2) = 1.8e-52
 Identities = 96/176 (54%), Positives = 127/176 (72%)

Query:     4 VELVKSVNWEQESYPAYEDFAVLPLFALYFPSVRFFLEKFVFEKVAKRWIFGKGHHMLDF 63
             ++L+   +W+QESYP   DF VL  FA +F  +R  L++ +FE+VA+R +  KG   L  
Sbjct:     3 LKLLSRPDWDQESYPDSSDFLVLIFFAPFFLFLRLILDRCIFERVARRLVVPKG---LCA 59

Query:    64 KTSERKKKIRKFNESAWKCVYFLTAELLALSVTYDEPWFKNTRCFWVGPGNQVWPDQKIK 123
              ++ER+KK+ KF ESAWKC+   + E  AL VTY EPWFK+TR FW+GPG+QVWPDQKIK
Sbjct:    60 DSNERRKKVVKFKESAWKCLCSFSVEAFALYVTYKEPWFKDTRSFWLGPGDQVWPDQKIK 119

Query:   124 LKLKGVYMYAAGFYTYSIFALMFWETRRADFGVSMGHHVATVILIVLSYIFRFALI 179
             LK+KG+YM+  G   Y+ FAL FWETRR+DF V + HH+ T  LI+LSY+FRFA I
Sbjct:   120 LKMKGMYMFVGGLNVYAFFALFFWETRRSDFKVMLVHHIVTSFLIILSYVFRFARI 175

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016021 "integral to membrane" evidence=IEA

TAIR|locus:2094133 LOH2 "LAG1 homologue 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 305 (112.4 bits), Expect = 3.5e-27, P = 3.5e-27
 Identities = 63/175 (36%), Positives = 95/175 (54%)

Query:     4 VELVKSVNWEQESYPAYE--DFAVLPLFALYFPSVRFFLEKFVFEKVAKRWIFGKGHHML 61
             +E V S   +    P+ E   F +   FA  F  +R  L+++VF+++A  W+   G   +
Sbjct:     1 MESVSSRGGDPVVKPSMEVWHFQIAVYFAFGFFFLRLVLDRYVFQRIAL-WLLSTGSAPI 59

Query:    62 DFKTSERKKKIRKFNESAWKCVYFLTAELLALSVTYDEPWFKNTRCFWVGPGNQVWPDQK 121
                 +  + KI K  ES WK +Y+   +   L V Y EPW ++ + ++ G     WP+Q+
Sbjct:    60 KLNDAATRAKIVKCKESLWKLLYYAACDFFVLQVIYHEPWARDIKLYFHG-----WPNQE 114

Query:   122 IKLKLKGVYMYAAGFYTYSIFALMFWETRRADFGVSMGHHVATVILIVLSYIFRF 176
             +KL +K  YM   GFY Y + AL+ WETRR DF V M HHV T+IL+  SY+  F
Sbjct:   115 LKLSIKLYYMCQCGFYVYGVAALLAWETRRKDFAVMMSHHVITIILLSYSYLTSF 169

GO:0016021 "integral to membrane" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0002238 "response to molecule of fungal origin" evidence=IMP

GO:0042759 "long-chain fatty acid biosynthetic process" evidence=IMP

GO:0050291 "sphingosine N-acyltransferase activity" evidence=IMP

GO:0016126 "sterol biosynthetic process" evidence=RCA

GO:0046520 "sphingoid biosynthetic process" evidence=RCA

MGI|MGI:1924143 Cers2 "ceramide synthase 2" [Mus musculus (taxid:10090)]

 Score = 170 (64.9 bits), Expect = 7.7e-15, Sum P(2) = 7.7e-15
 Identities = 36/113 (31%), Positives = 60/113 (53%)

Query:    64 KTSERKKKIRKFNESAWKCVYFLTAELLALSVTYDEPWFKNTRCFWVGPGNQVWPDQKIK 123
             +  +R   ++KF E++W+  Y+L A +  ++VT D+PWF + R  W G     +P Q I 
Sbjct:   122 RNQDRPSLLKKFREASWRFTYYLIAFVAGMAVTVDKPWFYDLRKVWEG-----YPIQSII 176

Query:   124 LKLKGVYMYAAGFYTYSIFALMFWETRRADFGVSMGHHVATVILIVLSYIFRF 176
                   YM    FY   +F++   + +R DF   + HHVAT+IL+  S+   +
Sbjct:   177 PSQYWYYMIELSFYWSLLFSIAS-DVKRKDFKEQIIHHVATIILLCFSWFANY 228

GO:0003677 "DNA binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0030148 "sphingolipid biosynthetic process" evidence=IDA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0046513 "ceramide biosynthetic process" evidence=IDA

GO:0050291 "sphingosine N-acyltransferase activity" evidence=IDA

UNIPROTKB|G3V8V4 Lass2 "Protein Lass2" [Rattus norvegicus (taxid:10116)]

 Score = 170 (64.9 bits), Expect = 7.7e-15, Sum P(2) = 7.7e-15
 Identities = 36/113 (31%), Positives = 60/113 (53%)

Query:    64 KTSERKKKIRKFNESAWKCVYFLTAELLALSVTYDEPWFKNTRCFWVGPGNQVWPDQKIK 123
             +  +R   ++KF E++W+  Y+L A +  ++VT D+PWF + R  W G     +P Q I 
Sbjct:   122 RNQDRPSLLKKFREASWRFTYYLIAFVAGMAVTVDKPWFYDLRKVWEG-----YPIQSII 176

Query:   124 LKLKGVYMYAAGFYTYSIFALMFWETRRADFGVSMGHHVATVILIVLSYIFRF 176
                   YM    FY   +F++   + +R DF   + HHVAT+IL+  S+   +
Sbjct:   177 PSQYWYYMIELAFYWSLLFSIAS-DVKRKDFKEQIIHHVATIILLCFSWFANY 228

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0031965 "nuclear membrane" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0046513 "ceramide biosynthetic process" evidence=IEA

GO:0050291 "sphingosine N-acyltransferase activity" evidence=IEA

RGD|1310059 Cers2 "ceramide synthase 2" [Rattus norvegicus (taxid:10116)]

 Score = 170 (64.9 bits), Expect = 8.3e-15, Sum P(2) = 8.3e-15
 Identities = 36/113 (31%), Positives = 60/113 (53%)

Query:    64 KTSERKKKIRKFNESAWKCVYFLTAELLALSVTYDEPWFKNTRCFWVGPGNQVWPDQKIK 123
             +  +R   ++KF E++W+  Y+L A +  ++VT D+PWF + R  W G     +P Q I 
Sbjct:   113 RNQDRPSLLKKFREASWRFTYYLIAFVAGMAVTVDKPWFYDLRKVWEG-----YPIQSII 167

Query:   124 LKLKGVYMYAAGFYTYSIFALMFWETRRADFGVSMGHHVATVILIVLSYIFRF 176
                   YM    FY   +F++   + +R DF   + HHVAT+IL+  S+   +
Sbjct:   168 PSQYWYYMIELAFYWSLLFSIAS-DVKRKDFKEQIIHHVATIILLCFSWFANY 219

GO:0003677 "DNA binding" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=ISO

GO:0016021 "integral to membrane" evidence=IEA

GO:0030148 "sphingolipid biosynthetic process" evidence=ISO

GO:0031965 "nuclear membrane" evidence=ISO

GO:0046513 "ceramide biosynthetic process" evidence=ISO

GO:0050291 "sphingosine N-acyltransferase activity" evidence=ISO

FB|FBgn0040918 schlank "schlank" [Drosophila melanogaster (taxid:7227)]

 Score = 173 (66.0 bits), Expect = 9.4e-15, Sum P(2) = 9.4e-15
 Identities = 32/110 (29%), Positives = 61/110 (55%)

Query:    64 KTSERKKKIRKFNESAWKCVYFLTAELLALSVTYDEPWFKNTRCFWVGPGNQVWPDQKIK 123
             +  ++   + KF E+ W+C+Y+L + +  + V +D+PWF + +  W G     +P Q I 
Sbjct:   125 RAQDKPSTLVKFCENTWRCIYYLYSFIFGVIVLWDKPWFWDVKSCWYG-----YPHQSIS 179

Query:   124 LKLKGVYMYAAGFYTYSIFALMFWETRRADFGVSMGHHVATVILIVLSYI 173
               +   YM +  FY +S+    F++ +R DF     HH+ T++L+ LS++
Sbjct:   180 NDIWWYYMISMSFY-WSLTGTQFFDVKRKDFWQMFIHHMVTLLLMSLSWV 228

GO:0005886 "plasma membrane" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0006641 "triglyceride metabolic process" evidence=IMP

GO:0046889 "positive regulation of lipid biosynthetic process" evidence=IMP

GO:0050995 "negative regulation of lipid catabolic process" evidence=IMP

GO:0032933 "SREBP signaling pathway" evidence=IMP

GO:0046513 "ceramide biosynthetic process" evidence=IMP

UNIPROTKB|Q5SZE4 CERS2 "Ceramide synthase 2" [Homo sapiens (taxid:9606)]

 Score = 154 (59.3 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
 Identities = 33/113 (29%), Positives = 58/113 (51%)

Query:    64 KTSERKKKIRKFNESAWKCVYFLTAELLALSVTYDEPWFKNTRCFWVGPGNQVWPDQKIK 123
             +  +R   ++KF E++W+  ++L A +  ++V  D+PWF + +  W G     +P Q   
Sbjct:   122 RNQDRPSLLKKFREASWRFTFYLIAFIAGMAVIVDKPWFYDMKKVWEG-----YPIQSTI 176

Query:   124 LKLKGVYMYAAGFYTYSIFALMFWETRRADFGVSMGHHVATVILIVLSYIFRF 176
                   YM    FY   +F++   + +R DF   + HHVAT+ILI  S+   +
Sbjct:   177 PSQYWYYMIELSFYWSLLFSIAS-DVKRKDFKEQIIHHVATIILISFSWFANY 228

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0031965 "nuclear membrane" evidence=IDA

UNIPROTKB|H0YKH6 CERS2 "Ceramide synthase 2" [Homo sapiens (taxid:9606)]

 Score = 151 (58.2 bits), Expect = 3.0e-14, Sum P(2) = 3.0e-14
 Identities = 33/108 (30%), Positives = 56/108 (51%)

Query:    64 KTSERKKKIRKFNESAWKCVYFLTAELLALSVTYDEPWFKNTRCFWVGPGNQVWPDQKIK 123
             +  +R   ++KF E++W+  ++L A +  ++V  D+PWF + +  W G     +P Q   
Sbjct:   122 RNQDRPSLLKKFREASWRFTFYLIAFIAGMAVIVDKPWFYDMKKVWEG-----YPIQSTI 176

Query:   124 LKLKGVYMYAAGFYTYSIFALMFWETRRADFGVSMGHHVATVILIVLS 171
                   YM    FY   +F++   + +R DF   + HHVAT+ILI  S
Sbjct:   177 PSQYWYYMIELSFYWSLLFSIAS-DVKRKDFKEQIIHHVATIILISFS 223

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0046513 "ceramide biosynthetic process" evidence=IEA

GO:0050291 "sphingosine N-acyltransferase activity" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0031965 "nuclear membrane" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q6EUN0	ASCL1_ORYSJ	No assigned EC number	0.7117	0.8704	0.5436	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	193
smart00724	205	smart00724, TLC, TRAM, LAG1 and CLN8 homology doma	6e-16
pfam03798	198	pfam03798, TRAM_LAG1_CLN8, TLC domain	2e-13
COG5058	395	COG5058, LAG1, Protein transporter of the TRAM (tr	3e-12

>gnl|CDD|214789 smart00724, TLC, TRAM, LAG1 and CLN8 homology domains

 Score = 71.9 bits (177), Expect = 6e-16
 Identities = 33/108 (30%), Positives = 59/108 (54%), Gaps = 9/108 (8%)

Query: 73  RKFNESAWKCVYFLTAELLALSVTYDEPWFKNTRCFWVGPGNQVWPDQKIKLKLKGVYMY 132
            KFNES+ + V +L + +  L   Y EPW  + +         ++P Q +    K  Y++
Sbjct: 1   SKFNESSNRLVSYLHSVIAGLYALYSEPWLSDPK--------SLYPIQGMSPLAKFYYLF 52

Query: 133 AAGFYTYSIFAL-MFWETRRADFGVSMGHHVATVILIVLSYIFRFALI 179
           + G++ + + AL +F + +R DF   + HH+AT++LI LSY+  F  +
Sbjct: 53  SLGYFIHDLVALLLFQDLKRKDFKEMLVHHIATLLLISLSYVLNFTRL 100

Protein domain with at least 5 transmembrane alpha-helices. Lag1p and Lac1p are essential for acyl-CoA-dependent ceramide synthesis, TRAM is a subunit of the translocon and the CLN8 gene is mutated in Northern epilepsy syndrome. The family may possess multiple functions such as lipid trafficking, metabolism, or sensing. Trh homologues possess additional homeobox domains. Length = 205

>gnl|CDD|217735 pfam03798, TRAM_LAG1_CLN8, TLC domain

 Score = 65.0 bits (159), Expect = 2e-13
 Identities = 34/117 (29%), Positives = 54/117 (46%), Gaps = 8/117 (6%)

Query: 74  KFNESAWKCVYFLTAELLALSVTYDEPWFKNTRCFWVGPGNQVWPDQKIKLKLKGVYMYA 133
           KFNE     V++L + +L L V   EPWF N    W    +++         +K  Y+  
Sbjct: 1   KFNERGVSLVHYLVSGILGLYVLLSEPWFWNPTWLWYPYPDRILGGT--SALVKFYYLIQ 58

Query: 134 AGFYTYSIFALMFWETRRADFGVSMGHHVATVILIVLSYIFRFALIQFCYCLLFFWL 190
            G++ + +  L+F+E RR      + HH+ T++LI  SY + F        LL   L
Sbjct: 59  LGYFLHDLLVLLFYEKRRKW--EMLLHHIITLLLISFSYFYNF----TRVGLLVLLL 109

Length = 198

>gnl|CDD|227391 COG5058, LAG1, Protein transporter of the TRAM (translocating chain-associating membrane) superfamily, longevity assurance factor [Intracellular trafficking and secretion]

 Score = 64.1 bits (156), Expect = 3e-12
 Identities = 40/156 (25%), Positives = 61/156 (39%), Gaps = 20/156 (12%)

Query: 24  AVLPLF-ALYFPSVRFFLEKFVFEKVAKRWIFGKGHHMLDFKTSERKKKIRKFNESAWKC 82
               LF  ++F  +R FL   V                        +KKI++F E  +  
Sbjct: 117 LCFVLFYMIFFTFLREFLMDVVIRPFGLELNVRS------------EKKIKRFCEQMYAI 164

Query: 83  VYFLTAELLALSVTYDEP-WFKNTRCFWVGPGNQVWPDQKIKLKLKGVYMYAAGFYTYSI 141
            Y+  +    L V    P WF NT+  +     + +P        K  Y+  A F+    
Sbjct: 165 FYYGVSGPFGLYVMRSSPLWFFNTKALY-----ETYPVFYNPFLFKAFYLIQAAFWAQQA 219

Query: 142 FAL-MFWETRRADFGVSMGHHVATVILIVLSYIFRF 176
             L +  E  R DF   + HH+ T++LI LSY+F F
Sbjct: 220 CILVLQLEKPRKDFKELVFHHIVTLLLIWLSYVFHF 255

Length = 395

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	193
KOG1607	318	consensus Protein transporter of the TRAM (translo	100.0
COG5058	395	LAG1 Protein transporter of the TRAM (translocatin	100.0
KOG1608	374	consensus Protein transporter of the TRAM (translo	99.96
smart00724	205	TLC TRAM, LAG1 and CLN8 homology domains. Protein	99.87
PF03798	198	TRAM_LAG1_CLN8: TLC domain; InterPro: IPR006634 TL	99.7
PF08390	65	TRAM1: TRAM1-like protein; InterPro: IPR013599 Thi	98.66
KOG4474	253	consensus Uncharacterized conserved protein [Funct	90.67
PF11658	518	DUF3260: Protein of unknown function (DUF3260); In	83.22
TIGR03368	518	cellulose_yhjU cellulose synthase operon protein Y	80.6

>KOG1607 consensus Protein transporter of the TRAM (translocating chain-associating membrane) superfamily [Intracellular trafficking, secretion, and vesicular transport]

Probab=100.00  E-value=1.5e-38  Score=275.02  Aligned_cols=153  Identities=37%  Similarity=0.685  Sum_probs=142.3

Q ss_pred             CCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCcccchhhhhHHHHhHhhhhhhHHHHHHHHhhhhhheeec
Q 029440           19 AYEDFAVLPLFALYFPSVRFFLEKFVFEKVAKRWIFGKGHHMLDFKTSERKKKIRKFNESAWKCVYFLTAELLALSVTYD   98 (193)
Q Consensus        19 ~~~Dl~~~~~~a~~~~~vR~~l~~~v~~pl~~~l~~~k~~~~~~~~~~~r~~~~~Kf~Es~w~~~yy~~~~~~g~~vl~~   98 (193)
                      +..|.++..+++..++..|....-.+..|...+.+..++            .+.+||+||+|+++||++++++|++|+++
T Consensus        45 ~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~------------~~~~k~~Es~Wk~~yy~~s~~~glyV~~~  112 (318)
T KOG1607|consen   45 GASDICFLRFYLLFFTFTRLFLMLLVGRPFPLRLNVTAD------------RRKKKFCESAWKFLYYLVSWIFGLYVMYH  112 (318)
T ss_pred             cccchhHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCcCc------------hhhhhhHHHHHHHHHHHHHHHHhhhheec
Confidence            578999999999999999999888888888888765432            22289999999999999999999999999


Q ss_pred             CCCCCChhhhhcCCCCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHHHHHHHHHHHhcchh
Q 029440           99 EPWFKNTRCFWVGPGNQVWPDQKIKLKLKGVYMYAAGFYTYSIFALMFWETRRADFGVSMGHHVATVILIVLSYIFRFAL  178 (193)
Q Consensus        99 ~pw~~~~~~~w~~~~~~~yP~~~~~~~~~~yYl~q~afy~~~~~~~~~~e~~RkDf~em~~HHiiTi~Li~~SY~~nf~R  178 (193)
                      +||+.|++.+|.+     ||+++++.++|+||++|+|||.|+++. ++.|++||||+||++||++|++||++||.+||+|
T Consensus       113 ~~wf~~~k~~w~~-----yP~~~~~~~~k~~Y~~e~gfY~~~l~a-l~~d~~rkDf~~m~vHHvvTl~Li~lSy~~~f~R  186 (318)
T KOG1607|consen  113 EPWFYDTKSFWEG-----YPDQTLPPSFKAYYLLEAGFYIQLLFA-LFLDEKRKDFWEMVVHHVVTLILISLSYVFNFTR  186 (318)
T ss_pred             chhhcCHHHHHhc-----CCCCCCCHHHHHHHHHhhHHHHHHHHH-HHhhccccHHHHHHHHHHHHHHHHHHHHHhhhhc
Confidence            9999999999999     999999999999999999999999999 6789999999999999999999999999999999


Q ss_pred             hHHHHHHHHHh
Q 029440          179 IQFCYCLLFFW  189 (193)
Q Consensus       179 iG~lVl~L~d~  189 (193)
                      +|.+|+++||.
T Consensus       187 ~G~lil~lhD~  197 (318)
T KOG1607|consen  187 VGTLILALHDA  197 (318)
T ss_pred             ccceeeeeecc
Confidence            99999999995

>COG5058 LAG1 Protein transporter of the TRAM (translocating chain-associating membrane) superfamily, longevity assurance factor [Intracellular trafficking and secretion]

Probab=100.00  E-value=1.4e-38  Score=273.15  Aligned_cols=153  Identities=25%  Similarity=0.467  Sum_probs=145.2

Q ss_pred             CCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCcccchhhhhHHHHhHhhhhhhHHHHHHHHhhhhhheeec
Q 029440           19 AYEDFAVLPLFALYFPSVRFFLEKFVFEKVAKRWIFGKGHHMLDFKTSERKKKIRKFNESAWKCVYFLTAELLALSVTYD   98 (193)
Q Consensus        19 ~~~Dl~~~~~~a~~~~~vR~~l~~~v~~pl~~~l~~~k~~~~~~~~~~~r~~~~~Kf~Es~w~~~yy~~~~~~g~~vl~~   98 (193)
                      |+.|++++++++++++.+|.+++..|++|++..++++.            ++|++|||||+|.++||++++.+|+|++++
T Consensus       113 G~~d~~F~lfy~ifftf~ref~md~virpf~l~~~v~s------------~kkikRf~eq~y~~fyy~v~g~~Glyvmrs  180 (395)
T COG5058         113 GILDLCFVLFYMIFFTFLREFLMDVVIRPFGLELNVRS------------EKKIKRFCEQMYAIFYYGVSGPFGLYVMRS  180 (395)
T ss_pred             ccchhhHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCC------------HHHHHHHHHHHHHHHHhhccccceEEEEec
Confidence            68899999999999999999999999999999988764            488899999999999999999999999999


Q ss_pred             CC-CCCChhhhhcCCCCCCCCCCccchhhHHHHHHHHHHHHHH--HHHHHhhhcccchHHHHHHHHHHHHHHHHHHHHhc
Q 029440           99 EP-WFKNTRCFWVGPGNQVWPDQKIKLKLKGVYMYAAGFYTYS--IFALMFWETRRADFGVSMGHHVATVILIVLSYIFR  175 (193)
Q Consensus        99 ~p-w~~~~~~~w~~~~~~~yP~~~~~~~~~~yYl~q~afy~~~--~~~~~~~e~~RkDf~em~~HHiiTi~Li~~SY~~n  175 (193)
                      +| |+.+++.+|.+     ||....|+.+|.||++|+|||.||  ++. +..|.+||||+||+.||++|++||..||.++
T Consensus       181 s~~w~fntk~l~et-----yp~~~~p~lfk~fYliqaafw~qQa~ilv-LqlEkprkD~~elv~HHIVTllLI~lSY~fh  254 (395)
T COG5058         181 SPLWFFNTKALYET-----YPVFYNPFLFKAFYLIQAAFWAQQACILV-LQLEKPRKDFKELVFHHIVTLLLIWLSYVFH  254 (395)
T ss_pred             CcchhhhhHHHHHh-----CccccCcHHHHHHHHHHHHHHHHHHhhhe-eeecchhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence            99 77799999999     999999999999999999999999  555 5689999999999999999999999999999


Q ss_pred             chhhHHHHHHHHHh
Q 029440          176 FALIQFCYCLLFFW  189 (193)
Q Consensus       176 f~RiG~lVl~L~d~  189 (193)
                      |+|+|+.|...||.
T Consensus       255 ftr~GlAI~itmDv  268 (395)
T COG5058         255 FTRMGLAIYITMDV  268 (395)
T ss_pred             HHhccceEEEEEec
Confidence            99999999999985

>KOG1608 consensus Protein transporter of the TRAM (translocating chain-associating membrane) superfamily [Intracellular trafficking, secretion, and vesicular transport]

Probab=99.96  E-value=9.6e-29  Score=210.61  Aligned_cols=155  Identities=18%  Similarity=0.390  Sum_probs=149.1

Q ss_pred             CCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCcccchhhhhHHHHhHhhhhhhHHHHHHHHhhhhhhe
Q 029440           16 SYPAYEDFAVLPLFALYFPSVRFFLEKFVFEKVAKRWIFGKGHHMLDFKTSERKKKIRKFNESAWKCVYFLTAELLALSV   95 (193)
Q Consensus        16 ~~p~~~Dl~~~~~~a~~~~~vR~~l~~~v~~pl~~~l~~~k~~~~~~~~~~~r~~~~~Kf~Es~w~~~yy~~~~~~g~~v   95 (193)
                      .+.|++|++.+++|.++++++++++|+|+++++.+++.++|             .|..||+||+...+||..|.++|.++
T Consensus        73 Y~yGikDl~tifFY~l~~IIiHAviQEyvLDKIsKr~hlSK-------------~k~~kFnESgql~~Fy~~S~vwg~~i  139 (374)
T KOG1608|consen   73 YYYGIKDLATIFFYMLVAIIIHAVIQEYVLDKISKRLHLSK-------------VKHSKFNESGQLVAFYLFSCVWGFYI  139 (374)
T ss_pred             eeechHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhH-------------hhhhhhccCCeeeehhhHHhhhhhee
Confidence            45589999999999999999999999999999999999876             67899999999999999999999999


Q ss_pred             eecCCCCCChhhhhcCCCCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHHHHHHHHHHHhc
Q 029440           96 TYDEPWFKNTRCFWVGPGNQVWPDQKIKLKLKGVYMYAAGFYTYSIFALMFWETRRADFGVSMGHHVATVILIVLSYIFR  175 (193)
Q Consensus        96 l~~~pw~~~~~~~w~~~~~~~yP~~~~~~~~~~yYl~q~afy~~~~~~~~~~e~~RkDf~em~~HHiiTi~Li~~SY~~n  175 (193)
                      +..|.+..|++..|.|     ||+++++..+|+||+.|+|||+|++++++|+++||.|....+.|-+..+..|+++|..|
T Consensus       140 li~E~yl~~p~~lW~~-----yPh~~msfq~Kffyi~QlaYwlHafPElYfQK~Kkeeiprqlvyi~l~l~hI~gAYlln  214 (374)
T KOG1608|consen  140 LISEGYLSDPTSLWEG-----YPHRVMSFQMKFFYISQLAYWLHAFPELYFQKTKKEEIPRQLVYIILHLFHIAGAYLLN  214 (374)
T ss_pred             eeecccccChHHHHhc-----CCCchhhHHHHHHHHHHHHHHHHHChHHHHHHHhhhhccHHHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999     99999999999999999999999999999999999999999999999999999999999


Q ss_pred             chhhHHHHHHHHH
Q 029440          176 FALIQFCYCLLFF  188 (193)
Q Consensus       176 f~RiG~lVl~L~d  188 (193)
                      +.|+|.+.+.|+-
T Consensus       215 l~rlgLvLl~LhY  227 (374)
T KOG1608|consen  215 LNRLGLVLLTLHY  227 (374)
T ss_pred             hHHHHHHHHHHHH
Confidence            9999999998863

>smart00724 TLC TRAM, LAG1 and CLN8 homology domains

Probab=99.87  E-value=6.8e-22  Score=161.15  Aligned_cols=110  Identities=32%  Similarity=0.575  Sum_probs=103.9

Q ss_pred             hHhhhhhhHHHHHHHHhhhhhheeecCCCCCChhhhhcCCCCCCCCCCccchhhHHHHHHHHHHHHHHHHHHH-hhhccc
Q 029440           73 RKFNESAWKCVYFLTAELLALSVTYDEPWFKNTRCFWVGPGNQVWPDQKIKLKLKGVYMYAAGFYTYSIFALM-FWETRR  151 (193)
Q Consensus        73 ~Kf~Es~w~~~yy~~~~~~g~~vl~~~pw~~~~~~~w~~~~~~~yP~~~~~~~~~~yYl~q~afy~~~~~~~~-~~e~~R  151 (193)
                      +|++|+.||+++|+.+++.|++++..++|++|+.   .+     +|.++.++..+.||.+|+|||+++++.+. +.+.+|
T Consensus         1 ~k~~e~~~~~vs~~hs~~~~~~~~~~~~~~~~~~---~~-----~p~~~~~~~~~~~~~~~~gYfi~d~~~~~~~~~~~~   72 (205)
T smart00724        1 SKFNESSNRLVSYLHSVIAGLYALYSEPWLSDPK---SL-----YPIQGMSPLAKFYYLFSLGYFIHDLVALLLFQDLKR   72 (205)
T ss_pred             CchHHHHHHHHHHHHHHHHHHhhhccCCcccCCc---cc-----CCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhcccch
Confidence            4899999999999999999999999999988887   56     99999999999999999999999999865 689999


Q ss_pred             chHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHhh
Q 029440          152 ADFGVSMGHHVATVILIVLSYIFRFALIQFCYCLLFFWL  190 (193)
Q Consensus       152 kDf~em~~HHiiTi~Li~~SY~~nf~RiG~lVl~L~d~~  190 (193)
                      ||++||+.||++|++++..||..|+.|+|.++++++|.-
T Consensus        73 ~d~~~~~~HHv~~~~~~~~~~~~~~~~~~~~~~~l~E~s  111 (205)
T smart00724       73 KDFKEMLVHHIATLLLISLSYVLNFTRLGLLLLLLHELS  111 (205)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhh
Confidence            999999999999999999999999999999999999963

Protein domain with at least 5 transmembrane alpha-helices. Lag1p and Lac1p are essential for acyl-CoA-dependent ceramide synthesis, TRAM is a subunit of the translocon and the CLN8 gene is mutated in Northern epilepsy syndrome. The family may possess multiple functions such as lipid trafficking, metabolism, or sensing. Trh homologues possess additional homeobox domains.

>PF03798 TRAM_LAG1_CLN8: TLC domain; InterPro: IPR006634 TLC is a protein domain with at least 5 transmembrane alpha-helices

Probab=99.70  E-value=9.6e-17  Score=128.72  Aligned_cols=105  Identities=25%  Similarity=0.555  Sum_probs=95.6

Q ss_pred             HhhhhhhHHHHHHHHhhhhhheeecCCCCCChhhhhcCCCCCCCCCCcc---chhhHHHHHHHHHHHHHHHHHHHhhhcc
Q 029440           74 KFNESAWKCVYFLTAELLALSVTYDEPWFKNTRCFWVGPGNQVWPDQKI---KLKLKGVYMYAAGFYTYSIFALMFWETR  150 (193)
Q Consensus        74 Kf~Es~w~~~yy~~~~~~g~~vl~~~pw~~~~~~~w~~~~~~~yP~~~~---~~~~~~yYl~q~afy~~~~~~~~~~e~~  150 (193)
                      ||+|+++.++++++++++|++++.++|      ++|.+     ||+.+.   +...+.++.+++||++++++.++..+++
T Consensus         1 ~~~~~~~s~~h~~~~~~~~~~~l~~~~------~~~~~-----~~~~~~~~~~~~~~~~~~~~~gYf~~Dl~~~~~~~~~   69 (198)
T PF03798_consen    1 KWNNRVVSFVHAIVSSIWGLYILLNDP------ELWSD-----WPDDPWYYSSWLVKFYYAFSLGYFLYDLIVMLLYYRK   69 (198)
T ss_pred             CHhHHHHHHHHHHHHHHHHHHHHhcCc------HHhhh-----cccCccCCccHHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence            789999999999999999999999888      67776     666554   4588999999999999999997777888


Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHh
Q 029440          151 RADFGVSMGHHVATVILIVLSYIFRFALIQFCYCLLFFW  189 (193)
Q Consensus       151 RkDf~em~~HHiiTi~Li~~SY~~nf~RiG~lVl~L~d~  189 (193)
                      |+|+++|+.||++|+.++..||..|+.|.|+++++++|.
T Consensus        70 ~~d~~~~~~HH~~~l~~~~~~~~~~~~~~~~~~~ll~E~  108 (198)
T PF03798_consen   70 RGDFWEMLLHHVVTLVLFYFSYFYNFGRFGIVVFLLHEI  108 (198)
T ss_pred             hhhhhHhhHHHHHHHHHHHHhhHHHHhhHHHHHHHHHhc
Confidence            889999999999999999999999999999999999985

Lag1p and Lac1p are essential for acyl-CoA-dependent ceramide synthesis [], TRAM is a subunit of the translocon and the CLN8 gene is mutated in Northern epilepsy syndrome. Proteins containing this domain may possess multiple functions such as lipid trafficking, metabolism, or sensing. Trh homologues possess additional homeobox domains [].; GO: 0016021 integral to membrane

>PF08390 TRAM1: TRAM1-like protein; InterPro: IPR013599 This family comprises sequences that are similar to human TRAM1 (Q15629 from SWISSPROT)

Probab=98.66  E-value=4.9e-08  Score=66.88  Aligned_cols=40  Identities=20%  Similarity=0.472  Sum_probs=37.6

Q ss_pred             CCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCC
Q 029440           18 PAYEDFAVLPLFALYFPSVRFFLEKFVFEKVAKRWIFGKG   57 (193)
Q Consensus        18 p~~~Dl~~~~~~a~~~~~vR~~l~~~v~~pl~~~l~~~k~   57 (193)
                      .|++|++++++++++++++|.++|++|++|+|++++++|+
T Consensus        24 ~G~~D~~fV~fy~i~~t~lRa~~m~yvl~Plar~~gi~k~   63 (65)
T PF08390_consen   24 KGWDDLYFVFFYIIVFTFLRAFLMEYVLDPLARKLGISKK   63 (65)
T ss_pred             cCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence            3789999999999999999999999999999999998764

This is a transmembrane protein of the endoplasmic reticulum, thought to be involved in the membrane transfer of secretory proteins []. The region featured in this family is found N-terminal to the longevity-assurance protein region (IPR005547 from INTERPRO).

>KOG4474 consensus Uncharacterized conserved protein [Function unknown]

Probab=90.67  E-value=3.8  Score=35.20  Aligned_cols=83  Identities=17%  Similarity=0.276  Sum_probs=53.5

Q ss_pred             hHhhhhhhHHHHHHHHhhhhhheeecCC-CCCChhhhhcCCCCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhccc
Q 029440           73 RKFNESAWKCVYFLTAELLALSVTYDEP-WFKNTRCFWVGPGNQVWPDQKIKLKLKGVYMYAAGFYTYSIFALMFWETRR  151 (193)
Q Consensus        73 ~Kf~Es~w~~~yy~~~~~~g~~vl~~~p-w~~~~~~~w~~~~~~~yP~~~~~~~~~~yYl~q~afy~~~~~~~~~~e~~R  151 (193)
                      .||..-.=.+.--+++..++.+.+.+.| -.-|+-.++..             .-..--++.+||.++.++- +..+++-
T Consensus        44 ~r~~n~~VSl~HS~Isg~~a~~~l~~~~~~~~~~~~~~s~-------------~~~~l~~fS~gYfiyD~vD-m~~~~~s  109 (253)
T KOG4474|consen   44 KRFSNLTVSLLHSTISGLWALLSLLYDPEMVDDPITYHSL-------------SAYQLLLFSAGYFIYDLVD-MLMNEQS  109 (253)
T ss_pred             hhhhhhHHHHHHHHHHHHHHHHHHHhCcccccCHHHHHhh-------------hhHHHHHHHHHHHHHHHHH-HHhcchh
Confidence            4555544445555566666666666666 22344444322             1233446688999999999 5567778


Q ss_pred             chHHHHHHHHHHHHHHHH
Q 029440          152 ADFGVSMGHHVATVILIV  169 (193)
Q Consensus       152 kDf~em~~HHiiTi~Li~  169 (193)
                      .+-+|.+.||++++.-.+
T Consensus       110 ~~s~e~LvHH~v~i~aF~  127 (253)
T KOG4474|consen  110 ELSWEYLVHHVVCIIAFV  127 (253)
T ss_pred             hhhHHHHHHHHHHHHHHH
Confidence            899999999998875443

>PF11658 DUF3260: Protein of unknown function (DUF3260); InterPro: IPR017744 This protein was identified by the partial phylogenetic profiling algorithm [] as part of the system for cellulose biosynthesis in bacteria, and in fact is found in cellulose biosynthesis gene regions

Probab=83.22  E-value=4.7  Score=37.94  Aligned_cols=88  Identities=14%  Similarity=0.335  Sum_probs=62.3

Q ss_pred             hHHHHHHHHhhhhhheeecCCCCCChhhhhcCCCCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHH
Q 029440           80 WKCVYFLTAELLALSVTYDEPWFKNTRCFWVGPGNQVWPDQKIKLKLKGVYMYAAGFYTYSIFALMFWETRRADFGVSMG  159 (193)
Q Consensus        80 w~~~yy~~~~~~g~~vl~~~pw~~~~~~~w~~~~~~~yP~~~~~~~~~~yYl~q~afy~~~~~~~~~~e~~RkDf~em~~  159 (193)
                      |+-.=+.+....|+..++++.|++.....|...+     +   -..+      +.+|++ .+.. -|..      ++|+.
T Consensus        41 l~~~R~~iAipig~aLly~DswLPp~~rl~~q~~-----q---l~~F------S~~Yl~-EL~~-Rfin------~~ml~   98 (518)
T PF11658_consen   41 LRRLRHWIAIPIGIALLYHDSWLPPFDRLWSQAG-----Q---LAGF------SFSYLL-ELAG-RFIN------WQMLG   98 (518)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHH-----H---HhcC------CHHHHH-HHHH-hcCC------HHHHH
Confidence            4445567788999999999999999999997721     0   1112      334444 2233 3333      77876


Q ss_pred             HHHHHHHHHHHHHHhcchhhHHHHHHHHHhhh
Q 029440          160 HHVATVILIVLSYIFRFALIQFCYCLLFFWLL  191 (193)
Q Consensus       160 HHiiTi~Li~~SY~~nf~RiG~lVl~L~d~~~  191 (193)
                        .+..+++++-++.++.||.+.|+.-+=|+.
T Consensus        99 --a~~vl~v~y~~ls~wiRvttfvv~~l~~l~  128 (518)
T PF11658_consen   99 --AAFVLLVAYLFLSQWIRVTTFVVAALVWLN  128 (518)
T ss_pred             --HHHHHHHHHHHHhhhhhhHHHHHHHHHHHh
Confidence              455677888889999999999999887763

The protein was designated YhjU in Salmonella enteritidis, where disruption of its gene disrupts cellulose biosynthesis and biofilm formation [].

>TIGR03368 cellulose_yhjU cellulose synthase operon protein YhjU

Probab=80.60  E-value=6.7  Score=36.83  Aligned_cols=87  Identities=11%  Similarity=0.255  Sum_probs=61.0

Q ss_pred             hHHHHHHHHhhhhhheeecCCCCCChhhhhcCCCCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHH
Q 029440           80 WKCVYFLTAELLALSVTYDEPWFKNTRCFWVGPGNQVWPDQKIKLKLKGVYMYAAGFYTYSIFALMFWETRRADFGVSMG  159 (193)
Q Consensus        80 w~~~yy~~~~~~g~~vl~~~pw~~~~~~~w~~~~~~~yP~~~~~~~~~~yYl~q~afy~~~~~~~~~~e~~RkDf~em~~  159 (193)
                      |+-.=+.+....|+.+++++.|++.....|...+     +   -..      ++++|++ .++. -|..      ++|+.
T Consensus        42 l~~~R~~iAipigi~Lly~Ds~LPp~~rl~~q~~-----q---l~~------Fs~~Yl~-EL~~-Rfi~------~~ml~   99 (518)
T TIGR03368        42 LRILRQFIAVPAGIALLYRDSWLPPLDRLWSQGG-----Q---LQG------FSLGYLV-ELLG-RFVN------WQMLL   99 (518)
T ss_pred             HHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHH-----H---Hhc------cCHHHHH-HHHH-hhCC------HHHHH
Confidence            4445566778899999999999999999987611     1   011      2344444 3333 3333      67775


Q ss_pred             HHHHHHHHHHHHHHhcchhhHHHHHHHHHhh
Q 029440          160 HHVATVILIVLSYIFRFALIQFCYCLLFFWL  190 (193)
Q Consensus       160 HHiiTi~Li~~SY~~nf~RiG~lVl~L~d~~  190 (193)
                        .+..+++++-++.+..|+++.|+.-|=|+
T Consensus       100 --~~~v~lv~Y~~lsqwiRvttfvv~~li~l  128 (518)
T TIGR03368       100 --AIFVVLVAYLLLNQWIRVTTFVVAALIAL  128 (518)
T ss_pred             --HHHHHHHHHHHHhhhhhhhHHHHHHHHHH
Confidence              55667888888999999999999888775

This protein was identified by the partial phylogenetic profiling algorithm (PubMed:16930487) as part of the system for cellulose biosynthesis in bacteria, and in fact is found in cellulose biosynthesis gene regions. The protein was designated YhjU in Salmonella enteritidis, where disruption of its gene disrupts cellulose biosynthesis and biofilm formation (PubMed:11929533).

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00