Citrus Sinensis ID: 029459

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190---
Protein Sequence
MMVRFKMYNSFGFKSLAAMLLFFILSISISYRASAETTMHTNNWAVLVCTSRFWFNYRHMANTLSLYRTVKRLGVPDERIILMLADDMACNARNKYPAQVFNNENHKLNLYGDNVEVDYHGYEVNAENFLRVLTGRHKAAVPRSKRLLSDEGSHILLYMTGHGGDEFLKFQDSEELQSHDLADAVKQMKEKRR
Secondary Structure (PSIPRED)
ccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccEEEEEEccccccccEEEHHHHHHHHHHHHcccccccEEEEEccccccccccccccEEEEcccccccccccccEEccccccccHHHHHHHHcccccccccccEEEEcccccEEEEEEcccccccEEEccccccccHHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
ccEEEcccccccHHHHHHHHHHHHHHHHcccccccccccccccEEEEEEcccccHcHHHHHHHHHHHHHHHHcccccccEEEEEcccccccccccccEEEEEcccccccEEcccccccccccEEcHHHHHHHHHcccccccccccEEEcccccEEEEEEccccccccccccccHHHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
MMVRFKMYNSFGFKSLAAMLLFFILSISISYRASaettmhtnnWAVLVCTSRFWFNYRHMANTLSLYRTVKRLGVPDERIILMLADDMacnarnkypaqvfnnenhklnlygdnvevdyhgyevnAENFLRVLTGrhkaavprskrllsdeGSHILLYMTghggdeflkfqdseelqsHDLADAVKQMKEKRR
Flexible Loop (DISEMBL)
MMVRFKMYNSFGFKSLAAMLLFFILSISISYRASAETTMHTNNWAVLVCTSRFWFNYRHMANTLSLYRTVKRLGVPDERIILMLADDMACNARNKYPAQVFNNENHKLNLYGDNVEVDYHGYEVNAENFLRVLTGRHKaavprskrllsdEGSHILLYMTGHGGDEFLKFQDSEELQSHDLADAVKQMKEKRR
Low Complexity Region (SEG)
MMVRFKMYNSFGFKSLAAMLLFFILSISISYRASAETTMHTNNWAVLVCTSRFWFNYRHMANTLSLYRTVKRLGVPDERIILMLADDMACNARNKYPAQVFNNENHKLNLYGDNVEVDYHGYEVNAENFLRVLTGRHKAAVPRSKRLLSDEGSHILLYMTGHGGDEFLKFQDSEELQSHDLADAVKQMKEKRR
Disordered region (IsUnstruct)
***RFKMYNSFGFKSLAAMLLFFILSISISYRASAETTMHTNNWAVLVCTSRFWFNYRHMANTLSLYRTVKRLGVPDERIILMLADDMACNARNKYPAQVFNNENHKLNLYGDNVEVDYHGYEVNAENFLRVLTGRHKAAVPRSKRLLSDEGSHILLYMTGHGGDEFLK************************
Disordered Region (DISOPRED)
********NSFGFKSLAAMLLFFILSISISYRASA**TMHTNNWAVLVCTSRFWFNYRHMANTLSLYRTVKRLGVPDERIILMLADDMACNARNKYPAQVFNNENHKLNLYGDNVEVDYHGYEVNAENFLRVLTGRHKA*V**SKRLLSDEGSHILLYMTGHGGDEFLKFQDSEELQSHDLADAVKQMK****
Disordered Region (DISEMBL)
MMVRFKMYNSFGFKSLAAMLLFFILSISISYRASAETTMHTNNWAVLVCTSRFWFNYRHMANTLSLYRTVKRLGVPDERIILMLADDMACNARNKYPAQVFNNENHKLNLYGDNVEVDYHGYEVNAENFLRVLTGRHKAAVPRSKRLLSDEGSHILLYMTGHGGDEFLKFQDSEELQSHDLADAV********
Disordered Region (DISPRO)
MMVRFKMYNSFGFKSLAAMLLFFILSISISYRAS****MHTNNWAVLVCTSRFWFNYRHMANTLSLYRTVKRLGVPDERIILMLADDMACNARNKYPAQVFNNENHKLNLYGDNVEVDYHGYEVNAENFLRVLTGRHKAAVPRSKRLLSDEGSHILLYMTGHGGDEFLKFQDSEELQSHDLADAVKQMKEK**
Transmembrane Helix (TMHMM)
ooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MMVRFKMYNSFGFKSLAAMLLFFILSISISYRASAETTMHTNNWAVLVCTSRFWFNYRHMANTLSLYRTVKRLGVPDERIILMLADDMACNARNKYPAQVFNNENHKLNLYGDNVEVDYHGYEVNAENFLRVLTGRHKAAVPRSKRLLSDEGSHILLYMTGHGGDEFLKFQDSEELQSHDLADAVKQMKEKRR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	193	2.2.26 [Sep-21-2011]
Q5R6L8	395	GPI-anchor transamidase O	yes	no	0.927	0.453	0.661	3e-66
Q92643	395	GPI-anchor transamidase O	yes	no	0.922	0.450	0.659	1e-65
Q9CXY9	395	GPI-anchor transamidase O	yes	no	0.797	0.389	0.733	1e-65
Q4KRV1	395	GPI-anchor transamidase O	yes	no	0.943	0.460	0.645	2e-65
Q8T4E1	355	Putative GPI-anchor trans	yes	no	0.829	0.450	0.675	3e-65
Q3MHZ7	395	GPI-anchor transamidase O	yes	no	0.797	0.389	0.720	7e-65
P49018	411	GPI-anchor transamidase O	yes	no	0.797	0.374	0.694	3e-64
Q9USP5	380	GPI-anchor transamidase O	yes	no	0.823	0.418	0.616	1e-58
P49048	319	Putative GPI-anchor trans	yes	no	0.813	0.492	0.613	3e-55
P09841	429	Hemoglobinase OS=Schistos	N/A	no	0.875	0.393	0.347	3e-22

>sp|Q5R6L8|GPI8_PONAB GPI-anchor transamidase OS=Pongo abelii GN=PIGK PE=2 SV=1

 Score =  251 bits (640), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 121/183 (66%), Positives = 148/183 (80%), Gaps = 4/183 (2%)

Query: 15  SLAAMLLFFILSISISY-RASAET---TMHTNNWAVLVCTSRFWFNYRHMANTLSLYRTV 70
           +LAA+LL    S++ S+    AE    + HTNNWAVLVCTSRFWFNYRH+ANTLS+YR+V
Sbjct: 13  TLAAVLLLSFGSVAASHIEDQAEQFFRSGHTNNWAVLVCTSRFWFNYRHVANTLSVYRSV 72

Query: 71  KRLGVPDERIILMLADDMACNARNKYPAQVFNNENHKLNLYGDNVEVDYHGYEVNAENFL 130
           KRLG+PD  I+LMLADDMACN RN  PA VF+++N +LN+YGD+VEVDY  YEV  ENFL
Sbjct: 73  KRLGIPDSHIVLMLADDMACNPRNPKPATVFSHKNMELNVYGDDVEVDYRSYEVTVENFL 132

Query: 131 RVLTGRHKAAVPRSKRLLSDEGSHILLYMTGHGGDEFLKFQDSEELQSHDLADAVKQMKE 190
           RVLTGR   + PRSKRLLSD+ S+IL+YMTGHGG+ FLKFQDSEE+ + +LADA +QM +
Sbjct: 133 RVLTGRIPPSTPRSKRLLSDDRSNILIYMTGHGGNGFLKFQDSEEITNIELADAFEQMWQ 192

Query: 191 KRR 193
           KRR
Sbjct: 193 KRR 195

Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein.
Pongo abelii (taxid: 9601)
EC: 3EC: .EC: -EC: .EC: -EC: .EC: -

>sp|Q92643|GPI8_HUMAN GPI-anchor transamidase OS=Homo sapiens GN=PIGK PE=1 SV=2

 Score =  248 bits (634), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 120/182 (65%), Positives = 146/182 (80%), Gaps = 4/182 (2%)

Query: 16  LAAMLLFFILSISISY-RASAET---TMHTNNWAVLVCTSRFWFNYRHMANTLSLYRTVK 71
           LA +LL    S++ S+    AE    + HTNNWAVLVCTSRFWFNYRH+ANTLS+YR+VK
Sbjct: 14  LATVLLLSFGSVAASHIEDQAEQFFRSGHTNNWAVLVCTSRFWFNYRHVANTLSVYRSVK 73

Query: 72  RLGVPDERIILMLADDMACNARNKYPAQVFNNENHKLNLYGDNVEVDYHGYEVNAENFLR 131
           RLG+PD  I+LMLADDMACN RN  PA VF+++N +LN+YGD+VEVDY  YEV  ENFLR
Sbjct: 74  RLGIPDSHIVLMLADDMACNPRNPKPATVFSHKNMELNVYGDDVEVDYRSYEVTVENFLR 133

Query: 132 VLTGRHKAAVPRSKRLLSDEGSHILLYMTGHGGDEFLKFQDSEELQSHDLADAVKQMKEK 191
           VLTGR   + PRSKRLLSD+ S+IL+YMTGHGG+ FLKFQDSEE+ + +LADA +QM +K
Sbjct: 134 VLTGRIPPSTPRSKRLLSDDRSNILIYMTGHGGNGFLKFQDSEEITNIELADAFEQMWQK 193

Query: 192 RR 193
           RR
Sbjct: 194 RR 195

Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein.

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q9CXY9|GPI8_MOUSE GPI-anchor transamidase OS=Mus musculus GN=Pigk PE=2 SV=2

 Score =  248 bits (634), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 113/154 (73%), Positives = 134/154 (87%)

Query: 40  HTNNWAVLVCTSRFWFNYRHMANTLSLYRTVKRLGVPDERIILMLADDMACNARNKYPAQ 99
           HTNNWAVLVCTSRFWFNYRH+ANTLS+YR+VKRLG+PD  I+LMLADDMACNARN  PA 
Sbjct: 42  HTNNWAVLVCTSRFWFNYRHVANTLSVYRSVKRLGIPDSHIVLMLADDMACNARNPKPAT 101

Query: 100 VFNNENHKLNLYGDNVEVDYHGYEVNAENFLRVLTGRHKAAVPRSKRLLSDEGSHILLYM 159
           VF+++N +LN+YGD+VEVDY  YEV  ENFLRVLTGR   + PRSKRLLSD+ S+IL+YM
Sbjct: 102 VFSHKNMELNVYGDDVEVDYRSYEVTVENFLRVLTGRVPPSTPRSKRLLSDDRSNILIYM 161

Query: 160 TGHGGDEFLKFQDSEELQSHDLADAVKQMKEKRR 193
           TGHGG+ FLKFQDSEE+ + +LADA +QM +KRR
Sbjct: 162 TGHGGNGFLKFQDSEEITNIELADAFEQMWQKRR 195

Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q4KRV1|GPI8_PIG GPI-anchor transamidase OS=Sus scrofa GN=PIGK PE=2 SV=1

 Score =  248 bits (633), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 120/186 (64%), Positives = 147/186 (79%), Gaps = 4/186 (2%)

Query: 12  GFKSLAAMLLFFILSISIS-YRASAET---TMHTNNWAVLVCTSRFWFNYRHMANTLSLY 67
           GF +LA +LL    S++ S     AE    + HTNNWAVLVCTSRFWFNYRH+ANTLS+Y
Sbjct: 10  GFTTLAGLLLLPFGSLAASQIEDQAEQFFRSGHTNNWAVLVCTSRFWFNYRHVANTLSVY 69

Query: 68  RTVKRLGVPDERIILMLADDMACNARNKYPAQVFNNENHKLNLYGDNVEVDYHGYEVNAE 127
           R+VKRLG+PD  I+LMLADDMACN RN  PA V++++N +LN+YGD+VEVDY  Y V  E
Sbjct: 70  RSVKRLGIPDSHIVLMLADDMACNPRNPKPATVYSHKNMELNVYGDDVEVDYRSYVVTVE 129

Query: 128 NFLRVLTGRHKAAVPRSKRLLSDEGSHILLYMTGHGGDEFLKFQDSEELQSHDLADAVKQ 187
           NFLRVLTGR   + PRSKRLLSD+ S+IL+YMTGHGG+ FLKFQDSEE+ + +LADA +Q
Sbjct: 130 NFLRVLTGRIPPSTPRSKRLLSDDRSNILIYMTGHGGNGFLKFQDSEEITNIELADAFEQ 189

Query: 188 MKEKRR 193
           M +KRR
Sbjct: 190 MWQKRR 195

Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein.

Sus scrofa (taxid: 9823)

EC: 3

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q8T4E1|GPI8_DROME Putative GPI-anchor transamidase OS=Drosophila melanogaster GN=CG4406 PE=2 SV=1

 Score =  247 bits (631), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 108/160 (67%), Positives = 134/160 (83%)

Query: 34  SAETTMHTNNWAVLVCTSRFWFNYRHMANTLSLYRTVKRLGVPDERIILMLADDMACNAR 93
           +A+ + HTNNWAVLV  SRFWFNYRH+AN LS+YR+VKRLG+PD +IILM+ADDMACNAR
Sbjct: 37  AAQRSTHTNNWAVLVDASRFWFNYRHVANVLSIYRSVKRLGIPDSQIILMIADDMACNAR 96

Query: 94  NKYPAQVFNNENHKLNLYGDNVEVDYHGYEVNAENFLRVLTGRHKAAVPRSKRLLSDEGS 153
           N  P QV+NN N  +N+YGD+VEVDY GYEV  ENF+R+LTGR +    RSK+LLSD GS
Sbjct: 97  NPRPGQVYNNANQHINVYGDDVEVDYRGYEVTVENFVRLLTGRTQNGTARSKKLLSDAGS 156

Query: 154 HILLYMTGHGGDEFLKFQDSEELQSHDLADAVKQMKEKRR 193
           ++L+Y+TGHGGD FLKFQDSEE+ S +LAD ++QM EK+R
Sbjct: 157 NVLIYLTGHGGDGFLKFQDSEEITSQELADGIQQMWEKKR 196

Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein.

Drosophila melanogaster (taxid: 7227)

EC: 3

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q3MHZ7|GPI8_BOVIN GPI-anchor transamidase OS=Bos taurus GN=PIGK PE=2 SV=1

 Score =  246 bits (628), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 111/154 (72%), Positives = 134/154 (87%)

Query: 40  HTNNWAVLVCTSRFWFNYRHMANTLSLYRTVKRLGVPDERIILMLADDMACNARNKYPAQ 99
           HTNNWAVLVCTSRFWFNYRH+ANTLS+YR+VKRLG+PD  I+LMLADDMACN RN  PA 
Sbjct: 42  HTNNWAVLVCTSRFWFNYRHVANTLSVYRSVKRLGIPDSHIVLMLADDMACNPRNPKPAT 101

Query: 100 VFNNENHKLNLYGDNVEVDYHGYEVNAENFLRVLTGRHKAAVPRSKRLLSDEGSHILLYM 159
           V++++N +LN+YGD+VEVDY  YEV  ENFLRVLTGR  ++ PRSKRLLSD+ S+IL+YM
Sbjct: 102 VYSHKNMELNVYGDDVEVDYRSYEVTVENFLRVLTGRIPSSTPRSKRLLSDDRSNILIYM 161

Query: 160 TGHGGDEFLKFQDSEELQSHDLADAVKQMKEKRR 193
           TGHGG+ FLKFQDSEE+ + +LADA +QM +KRR
Sbjct: 162 TGHGGNGFLKFQDSEEITNIELADAFEQMWQKRR 195

Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein.

Bos taurus (taxid: 9913)

EC: 3

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|P49018|GPI8_YEAST GPI-anchor transamidase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GPI8 PE=1 SV=1

 Score =  244 bits (623), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 107/154 (69%), Positives = 132/154 (85%)

Query: 40  HTNNWAVLVCTSRFWFNYRHMANTLSLYRTVKRLGVPDERIILMLADDMACNARNKYPAQ 99
           +TNNWAVLV TSRFWFNYRHMAN LS+YRTVKRLG+PD +IILML+DD+ACN+RN +P  
Sbjct: 35  NTNNWAVLVSTSRFWFNYRHMANVLSMYRTVKRLGIPDSQIILMLSDDVACNSRNLFPGS 94

Query: 100 VFNNENHKLNLYGDNVEVDYHGYEVNAENFLRVLTGRHKAAVPRSKRLLSDEGSHILLYM 159
           VFNN++H ++LYGD+VEVDY GYEV  ENF+R+LT R     P+SKRLL+DE S+I +YM
Sbjct: 95  VFNNKDHAIDLYGDSVEVDYRGYEVTVENFIRLLTDRWTEDHPKSKRLLTDENSNIFIYM 154

Query: 160 TGHGGDEFLKFQDSEELQSHDLADAVKQMKEKRR 193
           TGHGGD+FLKFQD+EE+ S D+ADA +QM EK+R
Sbjct: 155 TGHGGDDFLKFQDAEEIASEDIADAFQQMYEKKR 188

Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

EC: 3

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q9USP5|GPI8_SCHPO GPI-anchor transamidase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gpi8 PE=2 SV=1

 Score =  225 bits (573), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 98/159 (61%), Positives = 126/159 (79%)

Query: 35  AETTMHTNNWAVLVCTSRFWFNYRHMANTLSLYRTVKRLGVPDERIILMLADDMACNARN 94
           A  + HTNNWAVL+ TSRFWFNYRH AN L +YR+VKRLG+PD +IILM+ADD ACN+RN
Sbjct: 18  AAESSHTNNWAVLISTSRFWFNYRHTANVLGIYRSVKRLGIPDSQIILMIADDYACNSRN 77

Query: 95  KYPAQVFNNENHKLNLYGDNVEVDYHGYEVNAENFLRVLTGRHKAAVPRSKRLLSDEGSH 154
            +P  VF+N +  L+LYG+ +E+DY GYEV  E F+R+LT R     P SKRLL++E S+
Sbjct: 78  LFPGTVFDNADRALDLYGEEIEIDYKGYEVTVEAFIRLLTERVPENTPASKRLLTNERSN 137

Query: 155 ILLYMTGHGGDEFLKFQDSEELQSHDLADAVKQMKEKRR 193
           IL+YMTGHGGD F+KFQD+EEL S DLADA++Q+ + +R
Sbjct: 138 ILIYMTGHGGDGFIKFQDAEELSSEDLADAIEQIHQHKR 176

Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 3

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|P49048|GPI8_CAEEL Putative GPI-anchor transamidase OS=Caenorhabditis elegans GN=T05E11.6 PE=1 SV=3

 Score =  214 bits (545), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 97/158 (61%), Positives = 122/158 (77%), Gaps = 1/158 (0%)

Query: 36  ETTMHTNNWAVLVCTSRFWFNYRHMANTLSLYRTVKRLGVPDERIILMLADDMACNARNK 95
           +T  HTNNWAVLVCTS+FWFNYRH++N L+LY ++KRLG+PD  II+MLA+D+ CN+RN 
Sbjct: 31  DTPGHTNNWAVLVCTSKFWFNYRHVSNVLALYHSIKRLGIPDSNIIMMLAEDVPCNSRNP 90

Query: 96  YPAQVFNNENHKLNLYGDNVEVDYHGYEVNAENFLRVLTGRHKAAVPRSKRLLSDEGSHI 155
            P  V+       NLYG +VEVDY G EV  E+F+RVLTGRH  A PRSKRLL+D  S++
Sbjct: 91  RPGTVYA-ARAGTNLYGSDVEVDYRGEEVTVESFIRVLTGRHHPATPRSKRLLTDHQSNV 149

Query: 156 LLYMTGHGGDEFLKFQDSEELQSHDLADAVKQMKEKRR 193
           L+Y+TGHGGD F+KFQDSEEL + DLA A++ M E  R
Sbjct: 150 LIYLTGHGGDSFMKFQDSEELTNVDLAYAIQTMFEDNR 187

Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein.

Caenorhabditis elegans (taxid: 6239)

EC: 3

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|P09841|HGLB_SCHMA Hemoglobinase OS=Schistosoma mansoni PE=1 SV=3

 Score =  104 bits (260), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 65/187 (34%), Positives = 95/187 (50%), Gaps = 18/187 (9%)

Query: 19  MLLFFILSISI------------SYRASAETTMHTNNWAVLVCTSRFWFNYRHMANTLSL 66
           M+LF +  ISI            +Y  S ET    N WAVLV  S  + NYRH A+    
Sbjct: 1   MMLFSLFLISILHILLVKCQLDTNYEVSDETVSDNNKWAVLVAGSNGYPNYRHQADVCHA 60

Query: 67  YRTVKRLGVPDERIILMLADDMACNARNKYPAQVFNNENHKLNLYGDNVEVDYHGYEVNA 126
           Y  ++  G+  E II M+ DD+A N  N +P ++FN+ NHK + Y + V +DY G  VN+
Sbjct: 61  YHVLRSKGIKPEHIITMMYDDIAYNLMNPFPGKLFNDYNHK-DWY-EGVVIDYRGKNVNS 118

Query: 127 ENFLRVLTGRHKAAVPRSKRLLSDEGSHILLYMTGHGGDEFLKFQDSEELQSHDLADAVK 186
           + FL+VL G   A     K L S +   + +Y T HG    + F D +EL + +    +K
Sbjct: 119 KTFLKVLKGDKSAG---GKVLKSGKNDDVFIYFTDHGAPGLIAFPD-DELYAKEFMSTLK 174

Query: 187 QMKEKRR 193
            +   +R
Sbjct: 175 YLHSHKR 181

This protease is used by the parasite for degradation of the host globin.

Schistosoma mansoni (taxid: 6183)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 2

EC: .

EC: 3

EC: 4

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	193
224116008	406	predicted protein [Populus trichocarpa]	0.989	0.470	0.846	5e-94
356516961	402	PREDICTED: GPI-anchor transamidase-like	0.937	0.450	0.868	6e-90
255561891	391	gpi-anchor transamidase, putative [Ricin	0.849	0.419	0.920	4e-88
21537105	388	putative GPI-anchor transamidase [Arabid	0.901	0.448	0.862	4e-87
359488041	430	PREDICTED: GPI-anchor transamidase-like	0.968	0.434	0.817	4e-87
18390936	388	peptidase C13-like protein [Arabidopsis	0.901	0.448	0.862	4e-87
296087890	405	unnamed protein product [Vitis vinifera]	0.813	0.387	0.955	5e-87
297843662	382	hypothetical protein ARALYDRAFT_888110 [	0.834	0.421	0.925	1e-86
449449547	399	PREDICTED: GPI-anchor transamidase-like	0.854	0.413	0.890	3e-86
148906753	404	unknown [Picea sitchensis]	0.808	0.386	0.910	6e-84

>gi|224116008|ref|XP_002332025.1| predicted protein [Populus trichocarpa] gi|222875250|gb|EEF12381.1| predicted protein [Populus trichocarpa]

 Score =  348 bits (894), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 166/196 (84%), Positives = 179/196 (91%), Gaps = 5/196 (2%)

Query: 1   MMVRFKMYNSFGFKSLAAMLLFFILSISISYRA---SAETTMHTNNWAVLVCTSRFWFNY 57
           MM+ FK+Y+ F FK   ++ LFF L+ +I+Y +   SA+TTMHTNNWAVLVCTSRFWFNY
Sbjct: 1   MMMGFKIYSLFSFK--MSIFLFFFLNNAIAYSSHSSSADTTMHTNNWAVLVCTSRFWFNY 58

Query: 58  RHMANTLSLYRTVKRLGVPDERIILMLADDMACNARNKYPAQVFNNENHKLNLYGDNVEV 117
           RHMANTLSLYRTVKRLG+PDERIILMLADDMACNARNKYPAQVFNNENH+LNLYGDNVEV
Sbjct: 59  RHMANTLSLYRTVKRLGIPDERIILMLADDMACNARNKYPAQVFNNENHRLNLYGDNVEV 118

Query: 118 DYHGYEVNAENFLRVLTGRHKAAVPRSKRLLSDEGSHILLYMTGHGGDEFLKFQDSEELQ 177
           DY GYEV  ENFLRVLTGRH+ AVPRSKRLLSDEGSHILLYMTGHGGDEFLKFQDSEELQ
Sbjct: 119 DYRGYEVTVENFLRVLTGRHETAVPRSKRLLSDEGSHILLYMTGHGGDEFLKFQDSEELQ 178

Query: 178 SHDLADAVKQMKEKRR 193
           SHDLADAVKQMKEKRR
Sbjct: 179 SHDLADAVKQMKEKRR 194

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356516961|ref|XP_003527159.1| PREDICTED: GPI-anchor transamidase-like [Glycine max]

 Score =  335 bits (859), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 159/183 (86%), Positives = 168/183 (91%), Gaps = 2/183 (1%)

Query: 13  FKSLAAM-LLFFILSISISYRASA-ETTMHTNNWAVLVCTSRFWFNYRHMANTLSLYRTV 70
            K +A M LL   LS  ++Y +S+ ETTMHTNNWAVLVCTSRFWFNYRHMANTLSLYRTV
Sbjct: 6   IKKVAVMILLIMFLSYPVAYSSSSSETTMHTNNWAVLVCTSRFWFNYRHMANTLSLYRTV 65

Query: 71  KRLGVPDERIILMLADDMACNARNKYPAQVFNNENHKLNLYGDNVEVDYHGYEVNAENFL 130
           KRLG+PDERIILMLADDMACNARNKYPAQVFNNENH+LNLYGDNVEVDY GYEV  ENFL
Sbjct: 66  KRLGIPDERIILMLADDMACNARNKYPAQVFNNENHRLNLYGDNVEVDYRGYEVTVENFL 125

Query: 131 RVLTGRHKAAVPRSKRLLSDEGSHILLYMTGHGGDEFLKFQDSEELQSHDLADAVKQMKE 190
           RVLTGRH+ +VPRSKRLLSDEGSHILLYMTGHGGDEFLKFQDSEELQSHDLADAVKQMKE
Sbjct: 126 RVLTGRHETSVPRSKRLLSDEGSHILLYMTGHGGDEFLKFQDSEELQSHDLADAVKQMKE 185

Query: 191 KRR 193
           KRR
Sbjct: 186 KRR 188

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255561891|ref|XP_002521954.1| gpi-anchor transamidase, putative [Ricinus communis] gi|223538758|gb|EEF40358.1| gpi-anchor transamidase, putative [Ricinus communis]

 Score =  329 bits (843), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 151/164 (92%), Positives = 158/164 (96%)

Query: 30  SYRASAETTMHTNNWAVLVCTSRFWFNYRHMANTLSLYRTVKRLGVPDERIILMLADDMA 89
           S+ +S +TTMHTNNWAVLVCTSRFWFNYRHMANTLSLYRTVKRLG+PDERII MLADDMA
Sbjct: 23  SHSSSTDTTMHTNNWAVLVCTSRFWFNYRHMANTLSLYRTVKRLGIPDERIIFMLADDMA 82

Query: 90  CNARNKYPAQVFNNENHKLNLYGDNVEVDYHGYEVNAENFLRVLTGRHKAAVPRSKRLLS 149
           CNARNKYPAQVFNNENH+LNLYGDNVEVDY GYEV  ENFLRVLTGRH+AAVPRSKRL+S
Sbjct: 83  CNARNKYPAQVFNNENHRLNLYGDNVEVDYRGYEVTVENFLRVLTGRHEAAVPRSKRLIS 142

Query: 150 DEGSHILLYMTGHGGDEFLKFQDSEELQSHDLADAVKQMKEKRR 193
           DEGSHILLYMTGHGGDEFLKFQDSEELQSHDLADAVKQMKEKRR
Sbjct: 143 DEGSHILLYMTGHGGDEFLKFQDSEELQSHDLADAVKQMKEKRR 186

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|21537105|gb|AAM61446.1| putative GPI-anchor transamidase [Arabidopsis thaliana]

 Score =  326 bits (835), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 151/175 (86%), Positives = 163/175 (93%), Gaps = 1/175 (0%)

Query: 20  LLFFILSISISYRAS-AETTMHTNNWAVLVCTSRFWFNYRHMANTLSLYRTVKRLGVPDE 78
           +L  ++ +  S+ +S  +TT+HTNNWAVLVCTSRFWFNYRHMANTLSLYRTVKRLG+PDE
Sbjct: 3   ILTLVMLLCYSFVSSTGDTTIHTNNWAVLVCTSRFWFNYRHMANTLSLYRTVKRLGIPDE 62

Query: 79  RIILMLADDMACNARNKYPAQVFNNENHKLNLYGDNVEVDYHGYEVNAENFLRVLTGRHK 138
           RIILMLADDMACNARN+YPAQVFNNENHKLNLYGDNVEVDY GYEV  ENFLRVLTGRH+
Sbjct: 63  RIILMLADDMACNARNEYPAQVFNNENHKLNLYGDNVEVDYRGYEVTVENFLRVLTGRHE 122

Query: 139 AAVPRSKRLLSDEGSHILLYMTGHGGDEFLKFQDSEELQSHDLADAVKQMKEKRR 193
            AVPRSKRLLSDEGSHILLYMTGHGGDEFLKFQD+EELQSHDLADAVKQMKEKRR
Sbjct: 123 NAVPRSKRLLSDEGSHILLYMTGHGGDEFLKFQDAEELQSHDLADAVKQMKEKRR 177

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359488041|ref|XP_003633692.1| PREDICTED: GPI-anchor transamidase-like [Vitis vinifera]

 Score =  326 bits (835), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 161/197 (81%), Positives = 173/197 (87%), Gaps = 10/197 (5%)

Query: 5   FKMYNSFGFKSLAAMLLFFILS----ISISY----RASAETTMHTNNWAVLVCTSRFWFN 56
            KM + F F+  A +LL F ++     S++Y     +S+ TTMHTNNWAVLVCTSRFWFN
Sbjct: 24  LKMGSFFRFR--AFLLLIFAVTHLCCNSVAYGSSSASSSSTTMHTNNWAVLVCTSRFWFN 81

Query: 57  YRHMANTLSLYRTVKRLGVPDERIILMLADDMACNARNKYPAQVFNNENHKLNLYGDNVE 116
           YRHMANTLSLYRTVKRLG+PDERIILMLADDMACNARNKYPAQVFNNENH+LNLYGDNVE
Sbjct: 82  YRHMANTLSLYRTVKRLGIPDERIILMLADDMACNARNKYPAQVFNNENHRLNLYGDNVE 141

Query: 117 VDYHGYEVNAENFLRVLTGRHKAAVPRSKRLLSDEGSHILLYMTGHGGDEFLKFQDSEEL 176
           VDY GYEV  ENFLRVLTGRH+ AVPRSKRLLSDEGSHILLYMTGHGGDEFLKFQDSEEL
Sbjct: 142 VDYRGYEVTVENFLRVLTGRHETAVPRSKRLLSDEGSHILLYMTGHGGDEFLKFQDSEEL 201

Query: 177 QSHDLADAVKQMKEKRR 193
           QSHDLADAVKQMKEKRR
Sbjct: 202 QSHDLADAVKQMKEKRR 218

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18390936|ref|NP_563825.1| peptidase C13-like protein [Arabidopsis thaliana] gi|30680805|ref|NP_849616.1| peptidase C13-like protein [Arabidopsis thaliana] gi|42571407|ref|NP_973794.1| peptidase C13-like protein [Arabidopsis thaliana] gi|26450273|dbj|BAC42253.1| putative GPI-anchor transamidase [Arabidopsis thaliana] gi|332190220|gb|AEE28341.1| peptidase C13-like protein [Arabidopsis thaliana] gi|332190221|gb|AEE28342.1| peptidase C13-like protein [Arabidopsis thaliana] gi|332190222|gb|AEE28343.1| peptidase C13-like protein [Arabidopsis thaliana]

 Score =  325 bits (834), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 151/175 (86%), Positives = 163/175 (93%), Gaps = 1/175 (0%)

Query: 20  LLFFILSISISYRAS-AETTMHTNNWAVLVCTSRFWFNYRHMANTLSLYRTVKRLGVPDE 78
           +L  ++ +  S+ +S  +TT+HTNNWAVLVCTSRFWFNYRHMANTLSLYRTVKRLG+PDE
Sbjct: 3   ILTLVMLLCYSFVSSTGDTTIHTNNWAVLVCTSRFWFNYRHMANTLSLYRTVKRLGIPDE 62

Query: 79  RIILMLADDMACNARNKYPAQVFNNENHKLNLYGDNVEVDYHGYEVNAENFLRVLTGRHK 138
           RIILMLADDMACNARN+YPAQVFNNENHKLNLYGDNVEVDY GYEV  ENFLRVLTGRH+
Sbjct: 63  RIILMLADDMACNARNEYPAQVFNNENHKLNLYGDNVEVDYRGYEVTVENFLRVLTGRHE 122

Query: 139 AAVPRSKRLLSDEGSHILLYMTGHGGDEFLKFQDSEELQSHDLADAVKQMKEKRR 193
            AVPRSKRLLSDEGSHILLYMTGHGGDEFLKFQD+EELQSHDLADAVKQMKEKRR
Sbjct: 123 NAVPRSKRLLSDEGSHILLYMTGHGGDEFLKFQDAEELQSHDLADAVKQMKEKRR 177

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296087890|emb|CBI35173.3| unnamed protein product [Vitis vinifera]

 Score =  325 bits (834), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 150/157 (95%), Positives = 153/157 (97%)

Query: 37  TTMHTNNWAVLVCTSRFWFNYRHMANTLSLYRTVKRLGVPDERIILMLADDMACNARNKY 96
           TTMHTNNWAVLVCTSRFWFNYRHMANTLSLYRTVKRLG+PDERIILMLADDMACNARNKY
Sbjct: 37  TTMHTNNWAVLVCTSRFWFNYRHMANTLSLYRTVKRLGIPDERIILMLADDMACNARNKY 96

Query: 97  PAQVFNNENHKLNLYGDNVEVDYHGYEVNAENFLRVLTGRHKAAVPRSKRLLSDEGSHIL 156
           PAQVFNNENH+LNLYGDNVEVDY GYEV  ENFLRVLTGRH+ AVPRSKRLLSDEGSHIL
Sbjct: 97  PAQVFNNENHRLNLYGDNVEVDYRGYEVTVENFLRVLTGRHETAVPRSKRLLSDEGSHIL 156

Query: 157 LYMTGHGGDEFLKFQDSEELQSHDLADAVKQMKEKRR 193
           LYMTGHGGDEFLKFQDSEELQSHDLADAVKQMKEKRR
Sbjct: 157 LYMTGHGGDEFLKFQDSEELQSHDLADAVKQMKEKRR 193

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297843662|ref|XP_002889712.1| hypothetical protein ARALYDRAFT_888110 [Arabidopsis lyrata subsp. lyrata] gi|297335554|gb|EFH65971.1| hypothetical protein ARALYDRAFT_888110 [Arabidopsis lyrata subsp. lyrata]

 Score =  324 bits (831), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 149/161 (92%), Positives = 156/161 (96%)

Query: 33  ASAETTMHTNNWAVLVCTSRFWFNYRHMANTLSLYRTVKRLGVPDERIILMLADDMACNA 92
           +S +TT+HTNNWAVLVCTSRFWFNYRHMANTLSLYRTVKRLG+PDERIILMLADDMACNA
Sbjct: 18  SSGDTTIHTNNWAVLVCTSRFWFNYRHMANTLSLYRTVKRLGIPDERIILMLADDMACNA 77

Query: 93  RNKYPAQVFNNENHKLNLYGDNVEVDYHGYEVNAENFLRVLTGRHKAAVPRSKRLLSDEG 152
           RN+YPAQVFNNENHKLNLYGDNVEVDY GYEV  ENFLRVLTGRH+ AVPRSKRLLSDEG
Sbjct: 78  RNEYPAQVFNNENHKLNLYGDNVEVDYRGYEVTVENFLRVLTGRHENAVPRSKRLLSDEG 137

Query: 153 SHILLYMTGHGGDEFLKFQDSEELQSHDLADAVKQMKEKRR 193
           SHILLYMTGHGGDEFLKFQD+EELQSHDLADAVKQMKEKRR
Sbjct: 138 SHILLYMTGHGGDEFLKFQDAEELQSHDLADAVKQMKEKRR 178

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449449547|ref|XP_004142526.1| PREDICTED: GPI-anchor transamidase-like [Cucumis sativus] gi|449479751|ref|XP_004155697.1| PREDICTED: GPI-anchor transamidase-like [Cucumis sativus]

 Score =  323 bits (827), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 147/165 (89%), Positives = 158/165 (95%)

Query: 29  ISYRASAETTMHTNNWAVLVCTSRFWFNYRHMANTLSLYRTVKRLGVPDERIILMLADDM 88
           ++Y + +ETT+HTNNWAVLVCTSR+WFNYRHMANTLSLYRTVKRLG+PDERIILMLADD+
Sbjct: 26  MAYASPSETTLHTNNWAVLVCTSRYWFNYRHMANTLSLYRTVKRLGIPDERIILMLADDI 85

Query: 89  ACNARNKYPAQVFNNENHKLNLYGDNVEVDYHGYEVNAENFLRVLTGRHKAAVPRSKRLL 148
           ACN RNKYPA+VFNNENHK+NLYGDNVEVDY GYEV  ENFLRVLTGRH+AAVPRSKRLL
Sbjct: 86  ACNPRNKYPAEVFNNENHKINLYGDNVEVDYRGYEVTVENFLRVLTGRHEAAVPRSKRLL 145

Query: 149 SDEGSHILLYMTGHGGDEFLKFQDSEELQSHDLADAVKQMKEKRR 193
           SDEGSHILLYMTGHGGDEFLKFQDSEELQSHDLADAVKQMKEK R
Sbjct: 146 SDEGSHILLYMTGHGGDEFLKFQDSEELQSHDLADAVKQMKEKHR 190

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|148906753|gb|ABR16523.1| unknown [Picea sitchensis]

 Score =  315 bits (807), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 142/156 (91%), Positives = 150/156 (96%)

Query: 38  TMHTNNWAVLVCTSRFWFNYRHMANTLSLYRTVKRLGVPDERIILMLADDMACNARNKYP 97
           TMHTNNWAVLVCTSRFWFNYRHMANTLSLYRTVKRLG+PDERIILMLADDMACNARN YP
Sbjct: 34  TMHTNNWAVLVCTSRFWFNYRHMANTLSLYRTVKRLGIPDERIILMLADDMACNARNSYP 93

Query: 98  AQVFNNENHKLNLYGDNVEVDYHGYEVNAENFLRVLTGRHKAAVPRSKRLLSDEGSHILL 157
           AQVFNNENH++NLYGDNVEVDY GYEV  ENFLRVLTGRH  AVPRSKRLLSDEGSHILL
Sbjct: 94  AQVFNNENHQINLYGDNVEVDYRGYEVTVENFLRVLTGRHDPAVPRSKRLLSDEGSHILL 153

Query: 158 YMTGHGGDEFLKFQDSEELQSHDLADAVKQMKEKRR 193
           YMTGHGGD+FLKFQDSEE+QSHDLADA++QM+EKRR
Sbjct: 154 YMTGHGGDQFLKFQDSEEIQSHDLADAIEQMREKRR 189

Source: Picea sitchensis

Species: Picea sitchensis

Genus: Picea

Family: Pinaceae

Order: Coniferales

Class: Coniferopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	193
TAIR|locus:2025590	388	AT1G08750 "AT1G08750" [Arabido	0.901	0.448	0.862	2.9e-80
DICTYBASE|DDB_G0285461	446	pigK "phosphatidylinositol gly	0.797	0.345	0.766	1.2e-65
UNIPROTKB|Q5R6L8	395	PIGK "GPI-anchor transamidase"	0.927	0.453	0.661	3.1e-60
ZFIN|ZDB-GENE-040625-162	389	pigk "phosphatidylinositol gly	0.927	0.460	0.643	5e-60
UNIPROTKB|Q3MHZ7	395	PIGK "GPI-anchor transamidase"	0.953	0.465	0.643	8.1e-60
UNIPROTKB|A6NEM5	332	PIGK "GPI-anchor transamidase"	0.922	0.536	0.659	1e-59
UNIPROTKB|Q92643	395	PIGK "GPI-anchor transamidase"	0.922	0.450	0.659	1e-59
MGI|MGI:1913863	395	Pigk "phosphatidylinositol gly	0.797	0.389	0.733	1.3e-59
RGD|1306753	395	Pigk "phosphatidylinositol gly	0.797	0.389	0.733	1.3e-59
UNIPROTKB|Q4KRV1	395	PIGK "GPI-anchor transamidase"	0.943	0.460	0.645	2.2e-59

TAIR|locus:2025590 AT1G08750 "AT1G08750" [Arabidopsis thaliana (taxid:3702)]

 Score = 806 (288.8 bits), Expect = 2.9e-80, P = 2.9e-80
 Identities = 151/175 (86%), Positives = 163/175 (93%)

Query:    20 LLFFILSISISYRASA-ETTMHTNNWAVLVCTSRFWFNYRHMANTLSLYRTVKRLGVPDE 78
             +L  ++ +  S+ +S  +TT+HTNNWAVLVCTSRFWFNYRHMANTLSLYRTVKRLG+PDE
Sbjct:     3 ILTLVMLLCYSFVSSTGDTTIHTNNWAVLVCTSRFWFNYRHMANTLSLYRTVKRLGIPDE 62

Query:    79 RIILMLADDMACNARNKYPAQVFNNENHKLNLYGDNVEVDYHGYEVNAENFLRVLTGRHK 138
             RIILMLADDMACNARN+YPAQVFNNENHKLNLYGDNVEVDY GYEV  ENFLRVLTGRH+
Sbjct:    63 RIILMLADDMACNARNEYPAQVFNNENHKLNLYGDNVEVDYRGYEVTVENFLRVLTGRHE 122

Query:   139 AAVPRSKRLLSDEGSHILLYMTGHGGDEFLKFQDSEELQSHDLADAVKQMKEKRR 193
              AVPRSKRLLSDEGSHILLYMTGHGGDEFLKFQD+EELQSHDLADAVKQMKEKRR
Sbjct:   123 NAVPRSKRLLSDEGSHILLYMTGHGGDEFLKFQDAEELQSHDLADAVKQMKEKRR 177

GO:0003923 "GPI-anchor transamidase activity" evidence=ISS

GO:0004197 "cysteine-type endopeptidase activity" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA;ISS

GO:0016126 "sterol biosynthetic process" evidence=RCA

GO:0046520 "sphingoid biosynthetic process" evidence=RCA

GO:0005783 "endoplasmic reticulum" evidence=IDA

DICTYBASE|DDB_G0285461 pigK "phosphatidylinositol glycan, class K" [Dictyostelium discoideum (taxid:44689)]

 Score = 668 (240.2 bits), Expect = 1.2e-65, P = 1.2e-65
 Identities = 118/154 (76%), Positives = 136/154 (88%)

Query:    40 HTNNWAVLVCTSRFWFNYRHMANTLSLYRTVKRLGVPDERIILMLADDMACNARNKYPAQ 99
             HTNNWA+LVCTSRFWFNYRH+AN L  YRTVK+LG+PD +IILMLADDMACN RN Y   
Sbjct:    63 HTNNWALLVCTSRFWFNYRHIANVLGFYRTVKKLGIPDSQIILMLADDMACNPRNSYAGS 122

Query:   100 VFNNENHKLNLYGDNVEVDYHGYEVNAENFLRVLTGRHKAAVPRSKRLLSDEGSHILLYM 159
             +FNNENHKLNLYGDN+EVDY GYEVN ENF+RVLTGRH+  V RSKRLL+D+ S+IL+++
Sbjct:   123 IFNNENHKLNLYGDNIEVDYRGYEVNVENFIRVLTGRHEPEVARSKRLLTDDKSNILIFL 182

Query:   160 TGHGGDEFLKFQDSEELQSHDLADAVKQMKEKRR 193
             TGHGGDEFLKFQD+EE+ SHDLADA KQM EK+R
Sbjct:   183 TGHGGDEFLKFQDNEEISSHDLADAFKQMWEKKR 216

GO:0006508 "proteolysis" evidence=IEA

GO:0004197 "cysteine-type endopeptidase activity" evidence=IEA

GO:0044351 "macropinocytosis" evidence=RCA

UNIPROTKB|Q5R6L8 PIGK "GPI-anchor transamidase" [Pongo abelii (taxid:9601)]

 Score = 617 (222.3 bits), Expect = 3.1e-60, P = 3.1e-60
 Identities = 121/183 (66%), Positives = 147/183 (80%)

Query:    15 SLAAMLLFFILSISISY-RASAETTM---HTNNWAVLVCTSRFWFNYRHMANTLSLYRTV 70
             +LAA+LL    S++ S+    AE      HTNNWAVLVCTSRFWFNYRH+ANTLS+YR+V
Sbjct:    13 TLAAVLLLSFGSVAASHIEDQAEQFFRSGHTNNWAVLVCTSRFWFNYRHVANTLSVYRSV 72

Query:    71 KRLGVPDERIILMLADDMACNARNKYPAQVFNNENHKLNLYGDNVEVDYHGYEVNAENFL 130
             KRLG+PD  I+LMLADDMACN RN  PA VF+++N +LN+YGD+VEVDY  YEV  ENFL
Sbjct:    73 KRLGIPDSHIVLMLADDMACNPRNPKPATVFSHKNMELNVYGDDVEVDYRSYEVTVENFL 132

Query:   131 RVLTGRHKAAVPRSKRLLSDEGSHILLYMTGHGGDEFLKFQDSEELQSHDLADAVKQMKE 190
             RVLTGR   + PRSKRLLSD+ S+IL+YMTGHGG+ FLKFQDSEE+ + +LADA +QM +
Sbjct:   133 RVLTGRIPPSTPRSKRLLSDDRSNILIYMTGHGGNGFLKFQDSEEITNIELADAFEQMWQ 192

Query:   191 KRR 193
             KRR
Sbjct:   193 KRR 195

GO:0003923 "GPI-anchor transamidase activity" evidence=ISS

GO:0042765 "GPI-anchor transamidase complex" evidence=ISS

ZFIN|ZDB-GENE-040625-162 pigk "phosphatidylinositol glycan, class K" [Danio rerio (taxid:7955)]

 Score = 615 (221.5 bits), Expect = 5.0e-60, P = 5.0e-60
 Identities = 121/188 (64%), Positives = 147/188 (78%)

Query:    13 FKSLAAMLLFFILSISISYRASAETTM-------HTNNWAVLVCTSRFWFNYRHMANTLS 65
             F   + +LLF  +SI  +Y    ET         HTNNWAVLVCTSRFWFNYRH+ANTLS
Sbjct:     7 FTVYSCLLLF--VSIPCAYSNYVETKAGQFFSSGHTNNWAVLVCTSRFWFNYRHVANTLS 64

Query:    66 LYRTVKRLGVPDERIILMLADDMACNARNKYPAQVFNNENHKLNLYGDNVEVDYHGYEVN 125
             +YR+VKRLG+PD  I+LMLADDMACN RN  PA VF+++N +LN+YGD+VEVDY GYEV 
Sbjct:    65 VYRSVKRLGIPDSHIVLMLADDMACNYRNPKPATVFSHKNMELNVYGDDVEVDYRGYEVT 124

Query:   126 AENFLRVLTGRHKAAVPRSKRLLSDEGSHILLYMTGHGGDEFLKFQDSEELQSHDLADAV 185
              ENFLRVLTGR   + PRSKRLLSD+ S+IL+Y+TGHGG+ FLKFQDSEE+ + +LADA 
Sbjct:   125 VENFLRVLTGRLPLSTPRSKRLLSDDRSNILIYLTGHGGNGFLKFQDSEEISNMELADAF 184

Query:   186 KQMKEKRR 193
             +QM +KRR
Sbjct:   185 EQMWQKRR 192

GO:0004197 "cysteine-type endopeptidase activity" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0034394 "protein localization to cell surface" evidence=IMP

GO:0050976 "detection of mechanical stimulus involved in sensory perception of touch" evidence=IMP

UNIPROTKB|Q3MHZ7 PIGK "GPI-anchor transamidase" [Bos taurus (taxid:9913)]

 Score = 613 (220.8 bits), Expect = 8.1e-60, P = 8.1e-60
 Identities = 121/188 (64%), Positives = 148/188 (78%)

Query:    10 SFGFKSLAAMLLFFILSISISY-RASAETTM---HTNNWAVLVCTSRFWFNYRHMANTLS 65
             S G  +LA +LL    S++ S     AE      HTNNWAVLVCTSRFWFNYRH+ANTLS
Sbjct:     8 SRGLTTLAGLLLLPFGSLAASQIEDQAEQFFRSGHTNNWAVLVCTSRFWFNYRHVANTLS 67

Query:    66 LYRTVKRLGVPDERIILMLADDMACNARNKYPAQVFNNENHKLNLYGDNVEVDYHGYEVN 125
             +YR+VKRLG+PD  I+LMLADDMACN RN  PA V++++N +LN+YGD+VEVDY  YEV 
Sbjct:    68 VYRSVKRLGIPDSHIVLMLADDMACNPRNPKPATVYSHKNMELNVYGDDVEVDYRSYEVT 127

Query:   126 AENFLRVLTGRHKAAVPRSKRLLSDEGSHILLYMTGHGGDEFLKFQDSEELQSHDLADAV 185
              ENFLRVLTGR  ++ PRSKRLLSD+ S+IL+YMTGHGG+ FLKFQDSEE+ + +LADA 
Sbjct:   128 VENFLRVLTGRIPSSTPRSKRLLSDDRSNILIYMTGHGGNGFLKFQDSEEITNIELADAF 187

Query:   186 KQMKEKRR 193
             +QM +KRR
Sbjct:   188 EQMWQKRR 195

GO:0042765 "GPI-anchor transamidase complex" evidence=ISS

GO:0003923 "GPI-anchor transamidase activity" evidence=ISS

GO:0006506 "GPI anchor biosynthetic process" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0004197 "cysteine-type endopeptidase activity" evidence=IEA

UNIPROTKB|A6NEM5 PIGK "GPI-anchor transamidase" [Homo sapiens (taxid:9606)]

 Score = 612 (220.5 bits), Expect = 1.0e-59, P = 1.0e-59
 Identities = 120/182 (65%), Positives = 145/182 (79%)

Query:    16 LAAMLLFFILSISISY-RASAETTM---HTNNWAVLVCTSRFWFNYRHMANTLSLYRTVK 71
             LA +LL    S++ S+    AE      HTNNWAVLVCTSRFWFNYRH+ANTLS+YR+VK
Sbjct:    14 LATVLLLSFGSVAASHIEDQAEQFFRSGHTNNWAVLVCTSRFWFNYRHVANTLSVYRSVK 73

Query:    72 RLGVPDERIILMLADDMACNARNKYPAQVFNNENHKLNLYGDNVEVDYHGYEVNAENFLR 131
             RLG+PD  I+LMLADDMACN RN  PA VF+++N +LN+YGD+VEVDY  YEV  ENFLR
Sbjct:    74 RLGIPDSHIVLMLADDMACNPRNPKPATVFSHKNMELNVYGDDVEVDYRSYEVTVENFLR 133

Query:   132 VLTGRHKAAVPRSKRLLSDEGSHILLYMTGHGGDEFLKFQDSEELQSHDLADAVKQMKEK 191
             VLTGR   + PRSKRLLSD+ S+IL+YMTGHGG+ FLKFQDSEE+ + +LADA +QM +K
Sbjct:   134 VLTGRIPPSTPRSKRLLSDDRSNILIYMTGHGGNGFLKFQDSEEITNIELADAFEQMWQK 193

Query:   192 RR 193
             RR
Sbjct:   194 RR 195

GO:0004197 "cysteine-type endopeptidase activity" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

UNIPROTKB|Q92643 PIGK "GPI-anchor transamidase" [Homo sapiens (taxid:9606)]

 Score = 612 (220.5 bits), Expect = 1.0e-59, P = 1.0e-59
 Identities = 120/182 (65%), Positives = 145/182 (79%)

Query:    16 LAAMLLFFILSISISY-RASAETTM---HTNNWAVLVCTSRFWFNYRHMANTLSLYRTVK 71
             LA +LL    S++ S+    AE      HTNNWAVLVCTSRFWFNYRH+ANTLS+YR+VK
Sbjct:    14 LATVLLLSFGSVAASHIEDQAEQFFRSGHTNNWAVLVCTSRFWFNYRHVANTLSVYRSVK 73

Query:    72 RLGVPDERIILMLADDMACNARNKYPAQVFNNENHKLNLYGDNVEVDYHGYEVNAENFLR 131
             RLG+PD  I+LMLADDMACN RN  PA VF+++N +LN+YGD+VEVDY  YEV  ENFLR
Sbjct:    74 RLGIPDSHIVLMLADDMACNPRNPKPATVFSHKNMELNVYGDDVEVDYRSYEVTVENFLR 133

Query:   132 VLTGRHKAAVPRSKRLLSDEGSHILLYMTGHGGDEFLKFQDSEELQSHDLADAVKQMKEK 191
             VLTGR   + PRSKRLLSD+ S+IL+YMTGHGG+ FLKFQDSEE+ + +LADA +QM +K
Sbjct:   134 VLTGRIPPSTPRSKRLLSDDRSNILIYMTGHGGNGFLKFQDSEEITNIELADAFEQMWQK 193

Query:   192 RR 193
             RR
Sbjct:   194 RR 195

GO:0004197 "cysteine-type endopeptidase activity" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0016255 "attachment of GPI anchor to protein" evidence=TAS

GO:0005515 "protein binding" evidence=IPI

GO:0003756 "protein disulfide isomerase activity" evidence=TAS

GO:0034235 "GPI anchor binding" evidence=TAS

GO:0003923 "GPI-anchor transamidase activity" evidence=IMP;TAS

GO:0042765 "GPI-anchor transamidase complex" evidence=IMP

GO:0030176 "integral to endoplasmic reticulum membrane" evidence=NAS

GO:0005789 "endoplasmic reticulum membrane" evidence=TAS

GO:0006501 "C-terminal protein lipidation" evidence=TAS

GO:0043687 "post-translational protein modification" evidence=TAS

GO:0044267 "cellular protein metabolic process" evidence=TAS

GO:0006457 "protein folding" evidence=TAS

MGI|MGI:1913863 Pigk "phosphatidylinositol glycan anchor biosynthesis, class K" [Mus musculus (taxid:10090)]

 Score = 611 (220.1 bits), Expect = 1.3e-59, P = 1.3e-59
 Identities = 113/154 (73%), Positives = 134/154 (87%)

Query:    40 HTNNWAVLVCTSRFWFNYRHMANTLSLYRTVKRLGVPDERIILMLADDMACNARNKYPAQ 99
             HTNNWAVLVCTSRFWFNYRH+ANTLS+YR+VKRLG+PD  I+LMLADDMACNARN  PA 
Sbjct:    42 HTNNWAVLVCTSRFWFNYRHVANTLSVYRSVKRLGIPDSHIVLMLADDMACNARNPKPAT 101

Query:   100 VFNNENHKLNLYGDNVEVDYHGYEVNAENFLRVLTGRHKAAVPRSKRLLSDEGSHILLYM 159
             VF+++N +LN+YGD+VEVDY  YEV  ENFLRVLTGR   + PRSKRLLSD+ S+IL+YM
Sbjct:   102 VFSHKNMELNVYGDDVEVDYRSYEVTVENFLRVLTGRVPPSTPRSKRLLSDDRSNILIYM 161

Query:   160 TGHGGDEFLKFQDSEELQSHDLADAVKQMKEKRR 193
             TGHGG+ FLKFQDSEE+ + +LADA +QM +KRR
Sbjct:   162 TGHGGNGFLKFQDSEEITNIELADAFEQMWQKRR 195

GO:0003923 "GPI-anchor transamidase activity" evidence=ISO

GO:0004197 "cysteine-type endopeptidase activity" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0006506 "GPI anchor biosynthetic process" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0008233 "peptidase activity" evidence=IEA

GO:0008234 "cysteine-type peptidase activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016787 "hydrolase activity" evidence=IEA

GO:0042765 "GPI-anchor transamidase complex" evidence=ISO

RGD|1306753 Pigk "phosphatidylinositol glycan anchor biosynthesis, class K" [Rattus norvegicus (taxid:10116)]

 Score = 611 (220.1 bits), Expect = 1.3e-59, P = 1.3e-59
 Identities = 113/154 (73%), Positives = 134/154 (87%)

Query:    40 HTNNWAVLVCTSRFWFNYRHMANTLSLYRTVKRLGVPDERIILMLADDMACNARNKYPAQ 99
             HTNNWAVLVCTSRFWFNYRH+ANTLS+YR+VKRLG+PD  I+LMLADDMACNARN  PA 
Sbjct:    42 HTNNWAVLVCTSRFWFNYRHVANTLSVYRSVKRLGIPDSHIVLMLADDMACNARNPKPAT 101

Query:   100 VFNNENHKLNLYGDNVEVDYHGYEVNAENFLRVLTGRHKAAVPRSKRLLSDEGSHILLYM 159
             VF+++N +LN+YGD+VEVDY  YEV  ENFLRVLTGR   + PRSKRLLSD+ S+IL+YM
Sbjct:   102 VFSHKNMELNVYGDDVEVDYRSYEVTVENFLRVLTGRVPPSTPRSKRLLSDDRSNILIYM 161

Query:   160 TGHGGDEFLKFQDSEELQSHDLADAVKQMKEKRR 193
             TGHGG+ FLKFQDSEE+ + +LADA +QM +KRR
Sbjct:   162 TGHGGNGFLKFQDSEEITNIELADAFEQMWQKRR 195

GO:0003923 "GPI-anchor transamidase activity" evidence=ISO

GO:0042765 "GPI-anchor transamidase complex" evidence=ISO

UNIPROTKB|Q4KRV1 PIGK "GPI-anchor transamidase" [Sus scrofa (taxid:9823)]

 Score = 609 (219.4 bits), Expect = 2.2e-59, P = 2.2e-59
 Identities = 120/186 (64%), Positives = 146/186 (78%)

Query:    12 GFKSLAAMLLFFILSISISY-RASAETTM---HTNNWAVLVCTSRFWFNYRHMANTLSLY 67
             GF +LA +LL    S++ S     AE      HTNNWAVLVCTSRFWFNYRH+ANTLS+Y
Sbjct:    10 GFTTLAGLLLLPFGSLAASQIEDQAEQFFRSGHTNNWAVLVCTSRFWFNYRHVANTLSVY 69

Query:    68 RTVKRLGVPDERIILMLADDMACNARNKYPAQVFNNENHKLNLYGDNVEVDYHGYEVNAE 127
             R+VKRLG+PD  I+LMLADDMACN RN  PA V++++N +LN+YGD+VEVDY  Y V  E
Sbjct:    70 RSVKRLGIPDSHIVLMLADDMACNPRNPKPATVYSHKNMELNVYGDDVEVDYRSYVVTVE 129

Query:   128 NFLRVLTGRHKAAVPRSKRLLSDEGSHILLYMTGHGGDEFLKFQDSEELQSHDLADAVKQ 187
             NFLRVLTGR   + PRSKRLLSD+ S+IL+YMTGHGG+ FLKFQDSEE+ + +LADA +Q
Sbjct:   130 NFLRVLTGRIPPSTPRSKRLLSDDRSNILIYMTGHGGNGFLKFQDSEEITNIELADAFEQ 189

Query:   188 MKEKRR 193
             M +KRR
Sbjct:   190 MWQKRR 195

GO:0003923 "GPI-anchor transamidase activity" evidence=ISS

GO:0042765 "GPI-anchor transamidase complex" evidence=ISS

GO:0006506 "GPI anchor biosynthetic process" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0004197 "cysteine-type endopeptidase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9CXY9	GPI8_MOUSE	3, ., -, ., -, ., -	0.7337	0.7979	0.3898	yes	no
Q3MHZ7	GPI8_BOVIN	3, ., -, ., -, ., -	0.7207	0.7979	0.3898	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	193
COG5206	382	COG5206, GPI8, Glycosylphosphatidylinositol transa	3e-72
pfam01650	258	pfam01650, Peptidase_C13, Peptidase C13 family	9e-39

>gnl|CDD|227531 COG5206, GPI8, Glycosylphosphatidylinositol transamidase (GPIT), subunit GPI8 [Posttranslational modification, protein turnover, chaperones]

 Score =  222 bits (568), Expect = 3e-72
 Identities = 101/177 (57%), Positives = 127/177 (71%)

Query: 17  AAMLLFFILSISISYRASAETTMHTNNWAVLVCTSRFWFNYRHMANTLSLYRTVKRLGVP 76
            A     +LS+ + +   A    +TNNWAVL+ TSRFWFNYRHMAN L  YR VKRLG+P
Sbjct: 3   PAFTHLLLLSLILLHVLGAAARTNTNNWAVLLSTSRFWFNYRHMANVLVFYRVVKRLGIP 62

Query: 77  DERIILMLADDMACNARNKYPAQVFNNENHKLNLYGDNVEVDYHGYEVNAENFLRVLTGR 136
           D +IILM  DD ACN+RN +P  VFNN +   +LYG++ E+DY GYEV  E F+R+LT R
Sbjct: 63  DSQIILMSYDDQACNSRNLFPGSVFNNSDRAGDLYGEDSEIDYSGYEVTVEVFIRLLTAR 122

Query: 137 HKAAVPRSKRLLSDEGSHILLYMTGHGGDEFLKFQDSEELQSHDLADAVKQMKEKRR 193
                P+SKRLL+DE S+I +YMTGHGGD FLKFQD+EE+ S DLADA+ Q+  K+R
Sbjct: 123 SGENHPKSKRLLTDESSNIFIYMTGHGGDAFLKFQDAEEMTSEDLADAISQLAAKKR 179

Length = 382

>gnl|CDD|216627 pfam01650, Peptidase_C13, Peptidase C13 family

 Score =  133 bits (336), Expect = 9e-39
 Identities = 57/151 (37%), Positives = 85/151 (56%), Gaps = 2/151 (1%)

Query: 43  NWAVLVCTSRFWFNYRHMANTLSLYRTVKRLGVPDERIILMLADDMACNARNKYPAQVFN 102
            WAVLV  S  ++NYRH A+    Y+ +K+ G+ DE II+M+ DD+A N  N +P ++FN
Sbjct: 1   LWAVLVAGSNGYYNYRHQADVCHAYQLLKKFGIKDENIIVMMYDDIANNPENPFPGKIFN 60

Query: 103 NENHKLNLYGDNVEVDYHGYEVNAENFLRVLTGRHKAAVPRSKRLLSDEGSHILLYMTGH 162
             N   ++Y   V +DY G +V   NFL VL G   A     K L S    ++ +Y T H
Sbjct: 61  KPNGT-DVY-KGVPIDYTGNDVTPRNFLAVLLGDKSALKGSGKVLKSGPNDNVFIYFTDH 118

Query: 163 GGDEFLKFQDSEELQSHDLADAVKQMKEKRR 193
           G    L F + + L + DLA+A+K+M  + +
Sbjct: 119 GAPGVLGFPELDYLYAKDLAEALKKMHARGK 149

Members of this family are asparaginyl peptidases. The blood fluke parasite Schistosoma mansoni has at least five Clan CA cysteine peptidases in its digestive tract including cathepsins B (2 isoforms), C, F and L. All have been recombinantly expressed as active enzymes, albeit in various stages of activation. In addition, a Clan CD peptidase, termed asparaginyl endopeptidase or 'legumain' has been identified. This has formerly been characterized as a 'haemoglobinase', but this term is probably incorrect. Two cDNAs have been described for Schistosoma mansoni legumain; one encodes an active enzyme whereas the active site cysteine residue encoded by the second cDNA is substituted by an asparagine residue. Both forms have been recombinantly expressed. Length = 258

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	193
KOG1349	309	consensus Gpi-anchor transamidase [Posttranslation	100.0
KOG1348	477	consensus Asparaginyl peptidases [Posttranslationa	100.0
PF01650	256	Peptidase_C13: Peptidase C13 family; InterPro: IPR	100.0
COG5206	382	GPI8 Glycosylphosphatidylinositol transamidase (GP	100.0
PF00656	248	Peptidase_C14: Caspase domain; InterPro: IPR011600	97.44
KOG1546	362	consensus Metacaspase involved in regulation of ap	91.12
PRK10629	127	EnvZ/OmpR regulon moderator; Provisional	87.44
KOG1017	267	consensus Predicted uracil phosphoribosyltransfera	81.95
COG2949	235	SanA Uncharacterized membrane protein [Function un	80.5

>KOG1349 consensus Gpi-anchor transamidase [Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=6.8e-65  Score=441.49  Aligned_cols=154  Identities=78%  Similarity=1.292  Sum_probs=152.8

Q ss_pred             cCCcEEEEEecCCCCccchhhhhHHHHHHHHHhCCCCCCCEEEEecCccCCCCCCCCCCeEEeCCCCCccccCCCccccC
Q 029459           40 HTNNWAVLVCTSRFWFNYRHMANTLSLYRTVKRLGVPDERIILMLADDMACNARNKYPAQVFNNENHKLNLYGDNVEVDY  119 (193)
Q Consensus        40 ~~~~wAVlVagS~~w~NYRHqadv~~~Y~~Lk~~Gipde~IIlm~~DDiA~np~Np~pG~i~~~~~~~~n~Y~~~v~IDY  119 (193)
                      |++||||||+|||+||||||.|||+.+|+.+||.||||+|||+|++||+|||+|||+||+||++.++..|+||+.+++||
T Consensus        26 htnNwAVLv~tSRfwfNYRH~aNvl~~YrsvKrlGipDsqIilmladd~acn~RN~~pg~Vy~n~~~~~nlygd~vevdy  105 (309)
T KOG1349|consen   26 HTNNWAVLVCTSRFWFNYRHVANVLSVYRSVKRLGIPDSQIILMLADDMACNSRNPRPGTVYNNENHALNLYGDDVEVDY  105 (309)
T ss_pred             ccCceEEEEecchhhhhHHHHHHHHHHHHHHHHcCCCcccEEEEeccccccccCCCCCcceeccccccccccCCcceeec
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCHHHHHHHHcCCCCCCCCCcceecCCCCCcEEEEEeCCCCCCeeecCCCCccCHHHHHHHHHHHHHhcC
Q 029459          120 HGYEVNAENFLRVLTGRHKAAVPRSKRLLSDEGSHILLYMTGHGGDEFLKFQDSEELQSHDLADAVKQMKEKRR  193 (193)
Q Consensus       120 ~g~~Vt~enfl~VL~G~~~~~~p~~k~l~s~~~dnVFiY~tgHGg~g~i~fpd~~~l~a~dL~~~l~~M~~~kr  193 (193)
                      +|.+||+|+|+++||||.+..+|++|||.+++.+|||||+|||||+|||||||.|+|+.+||+++++||+|+||
T Consensus       106 rgyevtvEnflr~LTgR~~~~tprSKrlltDe~SNIlIYmtGHGgd~FlKFqd~eelts~dLadai~qm~e~~R  179 (309)
T KOG1349|consen  106 RGYEVTVENFLRVLTGRHPNNTPRSKRLLTDEGSNILIYLTGHGGDGFLKFQDAEELTSDDLADAIQQMWEKKR  179 (309)
T ss_pred             ccchhHHHHHHHHHcCCCCCCCchhhhhcccCCCcEEEEEccCCCccceecccHHHhhhHHHHHHHHHHHHhhh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999997

>KOG1348 consensus Asparaginyl peptidases [Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=3e-64  Score=454.43  Aligned_cols=156  Identities=35%  Similarity=0.608  Sum_probs=147.5

Q ss_pred             ccccc-CCcEEEEEecCCCCccchhhhhHHHHHHHHHhCCCCCCCEEEEecCccCCCCCCCCCCeEEeCCCCCccccCCC
Q 029459           36 ETTMH-TNNWAVLVCTSRFWFNYRHMANTLSLYRTVKRLGVPDERIILMLADDMACNARNKYPAQVFNNENHKLNLYGDN  114 (193)
Q Consensus        36 ~~~~~-~~~wAVlVagS~~w~NYRHqadv~~~Y~~Lk~~Gipde~IIlm~~DDiA~np~Np~pG~i~~~~~~~~n~Y~~~  114 (193)
                      +.+.. +.+||||||||+||||||||||||||||+||++|+|+||||+|||||||+||.||.||+|+|.|+++ ++|. |
T Consensus        38 d~~ddggt~waVLVAGSngyyNYRHQADvcHAYqiLrkgGikeEnIvv~MYDDIA~~~~NPrpG~iiN~P~G~-DvY~-G  115 (477)
T KOG1348|consen   38 DDDDDGGTRWAVLVAGSNGYYNYRHQADVCHAYQILRKGGIKEENIVVMMYDDIANNEENPRPGVIINRPNGK-DVYQ-G  115 (477)
T ss_pred             cCCccCceeEEEEEecCCcccchhhhhhHHHHHHHHHhcCCCchhEEEEEehhhhcCCCCCCCceeecCCCch-hhhc-C
Confidence            34444 4999999999999999999999999999999999999999999999999999999999999999995 8995 9


Q ss_pred             ccccCCCCCCCHHHHHHHHcCCCCCCCCC-cceecCCCCCcEEEEEeCCCCCCeeecCCCCccCHHHHHHHHHHHHHhcC
Q 029459          115 VEVDYHGYEVNAENFLRVLTGRHKAAVPR-SKRLLSDEGSHILLYMTGHGGDEFLKFQDSEELQSHDLADAVKQMKEKRR  193 (193)
Q Consensus       115 v~IDY~g~~Vt~enfl~VL~G~~~~~~p~-~k~l~s~~~dnVFiY~tgHGg~g~i~fpd~~~l~a~dL~~~l~~M~~~kr  193 (193)
                      |++||+|++|||+||++||.|+.+...++ +|||.|+|+||||||||||||+|.|.||+++.|+++||+++|++||+.|.
T Consensus       116 vpkDYtg~~Vt~~Nf~aVllGd~savkGGsGKV~~SgpnDhiFiYytDHG~pGvl~mP~~~~l~akdlnevL~kmhk~k~  195 (477)
T KOG1348|consen  116 VPKDYTGEDVTPQNFLAVLLGDASAVKGGSGKVLKSGPNDHIFIYYTDHGGPGVLGMPTSPDLYAKDLNEVLKKMHKSKT  195 (477)
T ss_pred             CCCcccCCcCCHHHHHHHHhcccccccCCCceeeccCCCceEEEEEecCCCCceEecCCCcchhHHHHHHHHHHHHhccc
Confidence            99999999999999999999999988775 49999999999999999999999999999999999999999999999874

>PF01650 Peptidase_C13: Peptidase C13 family; InterPro: IPR001096 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=100.00  E-value=3.4e-60  Score=411.50  Aligned_cols=147  Identities=54%  Similarity=0.955  Sum_probs=142.8

Q ss_pred             cEEEEEecCCCCccchhhhhHHHHHHHHHhCCCCCCCEEEEecCccCCCCCCCCCCeEEeCCCCCccccCCCccccCCCC
Q 029459           43 NWAVLVCTSRFWFNYRHMANTLSLYRTVKRLGVPDERIILMLADDMACNARNKYPAQVFNNENHKLNLYGDNVEVDYHGY  122 (193)
Q Consensus        43 ~wAVlVagS~~w~NYRHqadv~~~Y~~Lk~~Gipde~IIlm~~DDiA~np~Np~pG~i~~~~~~~~n~Y~~~v~IDY~g~  122 (193)
                      |||||||||++|+|||||||+|++||+||++|+||||||||+|||+||||+||+||+||++|++ .|+|. |++|||+|+
T Consensus         1 ~wAvlvagS~~~~NYRh~ad~~~~Y~~l~~~G~~~~~Iil~~~dd~a~~~~Np~~g~i~~~~~~-~n~y~-~~~iDY~g~   78 (256)
T PF01650_consen    1 NWAVLVAGSNGWFNYRHQADVCHAYQLLKRNGIPDENIILMMYDDIACNPRNPFPGKIFNDPDG-TNVYK-GVEIDYRGE   78 (256)
T ss_pred             CEEEEEeccCCceeeeEehHHHHHHHHHHHcCCCCceEEEEecCCccchhhCCCCceEEeCCCc-ccccC-Ccccccccc
Confidence            7999999999999999999999999999999999999999999999999999999999999997 69996 799999999


Q ss_pred             CCCHHHHHHHHcCCCCCCCCCcceecCCCCCcEEEEEeCCCCCCeeecCCCCccCHHHHHHHHHHHHHhcC
Q 029459          123 EVNAENFLRVLTGRHKAAVPRSKRLLSDEGSHILLYMTGHGGDEFLKFQDSEELQSHDLADAVKQMKEKRR  193 (193)
Q Consensus       123 ~Vt~enfl~VL~G~~~~~~p~~k~l~s~~~dnVFiY~tgHGg~g~i~fpd~~~l~a~dL~~~l~~M~~~kr  193 (193)
                      +||+++|++||+|++. . +++|+|.++++|+|||||+||||+|+|+||+.+.|+++||+++|++|++++|
T Consensus        79 ~v~~~~fl~vL~G~~~-~-~~~kvl~s~~~D~vfiy~~~HG~~~~l~~~~~~~l~~~~L~~~L~~m~~~~~  147 (256)
T PF01650_consen   79 DVTPENFLNVLTGDKS-V-PSGKVLNSTENDNVFIYFTGHGGPGFLKFPDGEELTADDLADALDKMHEKKR  147 (256)
T ss_pred             ccCHHHHHHHhcCCCC-C-CccccccCCCCCeEEEEEeccCCCCcccCCCcccccHHHHHHHHHHHHhhCC
Confidence            9999999999999998 3 8999999999999999999999999999998899999999999999999986

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This group of cysteine peptidases belong to the MEROPS peptidase family C13 (legumain family, clan CD). A type example is legumain from Canavalia ensiformis (Jack bean, Horse bean). The blood fluke parasite Schistosoma mansoni has two cysteine proteases in its digestive tract, one a cathepsin B-like protease, the other termed hemoglobinase [, ]. The latter has been hard to purify, free of cathepsin B, and expressed forms in Escherichia coli prove to be inactive, suggesting that hemoglobinase may act in association with cathepsin B [, ]. Plant vacuolar processing enzyme and legumain from legumes [] have been shown to have sequence and functional similarity to hemoglobinase. The catalytic residues of the family are currently unknown, but sequence alignments reveal one totally conserved cysteine and two totally conserved histidines.; GO: 0004197 cysteine-type endopeptidase activity, 0006508 proteolysis

>COG5206 GPI8 Glycosylphosphatidylinositol transamidase (GPIT), subunit GPI8 [Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=2.8e-54  Score=378.56  Aligned_cols=155  Identities=63%  Similarity=1.085  Sum_probs=152.5

Q ss_pred             ccCCcEEEEEecCCCCccchhhhhHHHHHHHHHhCCCCCCCEEEEecCccCCCCCCCCCCeEEeCCCCCccccCCCcccc
Q 029459           39 MHTNNWAVLVCTSRFWFNYRHMANTLSLYRTVKRLGVPDERIILMLADDMACNARNKYPAQVFNNENHKLNLYGDNVEVD  118 (193)
Q Consensus        39 ~~~~~wAVlVagS~~w~NYRHqadv~~~Y~~Lk~~Gipde~IIlm~~DDiA~np~Np~pG~i~~~~~~~~n~Y~~~v~ID  118 (193)
                      .+++|||||+++||+||||||.|||+.+|..+|+.||||++||+|.|||.|||.||-|||.||++.+...++|++.++||
T Consensus        25 t~tnNwAvLlstSRfwfNYRHmANVl~~Yr~vkrlGipDsQIilm~~dd~acnsRnlfpgsvf~N~Dra~dlyge~~eid  104 (382)
T COG5206          25 TNTNNWAVLLSTSRFWFNYRHMANVLVFYRVVKRLGIPDSQIILMSYDDQACNSRNLFPGSVFNNSDRAGDLYGEDSEID  104 (382)
T ss_pred             ccCCceEEEEecccceeehhhhhhHHHHHHHHHHcCCCcceEEEEechhhhhhhcccCCcccccCcccccceeCcccccc
Confidence            78999999999999999999999999999999999999999999999999999999999999999998889999999999


Q ss_pred             CCCCCCCHHHHHHHHcCCCCCCCCCcceecCCCCCcEEEEEeCCCCCCeeecCCCCccCHHHHHHHHHHHHHhcC
Q 029459          119 YHGYEVNAENFLRVLTGRHKAAVPRSKRLLSDEGSHILLYMTGHGGDEFLKFQDSEELQSHDLADAVKQMKEKRR  193 (193)
Q Consensus       119 Y~g~~Vt~enfl~VL~G~~~~~~p~~k~l~s~~~dnVFiY~tgHGg~g~i~fpd~~~l~a~dL~~~l~~M~~~kr  193 (193)
                      |+|.+||+|+|.++|+-+..+..|.+||+.+++++|||||||||||++||||||-|+|+++||++++++|+++||
T Consensus       105 Y~gyevTve~firLLt~r~~en~p~sKrlltdE~SNIfIYmtGHGgd~FlKFqdaeemtseDladai~ql~~~kR  179 (382)
T COG5206         105 YSGYEVTVEVFIRLLTARSGENHPKSKRLLTDESSNIFIYMTGHGGDAFLKFQDAEEMTSEDLADAISQLAAKKR  179 (382)
T ss_pred             cccccchHHHHHHHHHhhccCCChhhhhhcccccCcEEEEEccCCCccceecccHHHhhhHHHHHHHHHHHHhhh
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999997

>PF00656 Peptidase_C14: Caspase domain; InterPro: IPR011600 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=97.44  E-value=9.3e-05  Score=61.14  Aligned_cols=75  Identities=20%  Similarity=0.400  Sum_probs=55.2

Q ss_pred             cEEEEEecCCCCc-cchh--hhhHHHHHHHHHhCCCCCCCEEEEecCccCCCCCCCCCCeEEeCCCCCccccCCCccccC
Q 029459           43 NWAVLVCTSRFWF-NYRH--MANTLSLYRTVKRLGVPDERIILMLADDMACNARNKYPAQVFNNENHKLNLYGDNVEVDY  119 (193)
Q Consensus        43 ~wAVlVagS~~w~-NYRH--qadv~~~Y~~Lk~~Gipde~IIlm~~DDiA~np~Np~pG~i~~~~~~~~n~Y~~~v~IDY  119 (193)
                      +|||||+-+.+=. +-++  ..|+-.+.+.|++.|++.++| ++  ++                                
T Consensus         1 ~~AliIg~~~y~~~~~L~~~~~D~~~~~~~L~~~gf~~~~~-l~--~~--------------------------------   45 (248)
T PF00656_consen    1 KRALIIGVNYYQNPPPLPGAVNDAEAMAEALEKLGFDVENI-LI--DN--------------------------------   45 (248)
T ss_dssp             EEEEEEEESSTSSTCHCTTHHHHHHHHHHHHHHTTEEEEEE-EE--ES--------------------------------
T ss_pred             CEEEEEEeeCCCCCCCCCCHHHHHHHHHHHHHHcCCceeec-cc--cc--------------------------------
Confidence            4899999886321 2233  378999999999999999998 33  22                                


Q ss_pred             CCCCCCHHHHHHHHcCCCCCCCCCcceecCCCCCcEEEEEeCCCCC
Q 029459          120 HGYEVNAENFLRVLTGRHKAAVPRSKRLLSDEGSHILLYMTGHGGD  165 (193)
Q Consensus       120 ~g~~Vt~enfl~VL~G~~~~~~p~~k~l~s~~~dnVFiY~tgHGg~  165 (193)
                          +|.+++.+.|+--...         ..++|.++|||+|||..
T Consensus        46 ----~t~~~i~~~l~~l~~~---------~~~~D~~~~yfsGHG~~   78 (248)
T PF00656_consen   46 ----ATRANILKALRELLQR---------AQPGDSVVFYFSGHGIQ   78 (248)
T ss_dssp             ----SSHHHHHHHHHHHHTS---------GGTCSEEEEEEESEEET
T ss_pred             ----hHHHHHHHHHhhhhcc---------CCCCCeeEEEEeccccc
Confidence                6778888887744321         13789999999999965

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This group of sequences represent the p20 (20kDa) and p10 (10kDa) subunits of caspases, which together form the catalytic domain of the caspase and are derived from the p45 (45 kDa) precursor (IPR002398 from INTERPRO) []. Caspases (Cysteine-dependent ASPartyl-specific proteASE) are cysteine peptidases that belong to the MEROPS peptidase family C14 (caspase family, clan CD) based on the architecture of their catalytic dyad or triad []. Caspases are tightly regulated proteins that require zymogen activation to become active, and once active can be regulated by caspase inhibitors. Activated caspases act as cysteine proteases, using the sulphydryl group of a cysteine side chain for catalysing peptide bond cleavage at aspartyl residues in their substrates. The catalytic cysteine and histidine residues are on the p20 subunit after cleavage of the p45 precursor. Caspases are mainly involved in mediating cell death (apoptosis) [, , ]. They have two main roles within the apoptosis cascade: as initiators that trigger the cell death process, and as effectors of the process itself. Caspase-mediated apoptosis follows two main pathways, one extrinsic and the other intrinsic or mitochondrial-mediated. The extrinsic pathway involves the stimulation of various TNF (tumour necrosis factor) cell surface receptors on cells targeted to die by various TNF cytokines that are produced by cells such as cytotoxic T cells. The activated receptor transmits the signal to the cytoplasm by recruiting FADD, which forms a death-inducing signalling complex (DISC) with caspase-8. The subsequent activation of caspase-8 initiates the apoptosis cascade involving caspases 3, 4, 6, 7, 9 and 10. The intrinsic pathway arises from signals that originate within the cell as a consequence of cellular stress or DNA damage. The stimulation or inhibition of different Bcl-2 family receptors results in the leakage of cytochrome c from the mitochondria, and the formation of an apoptosome composed of cytochrome c, Apaf1 and caspase-9. The subsequent activation of caspase-9 initiates the apoptosis cascade involving caspases 3 and 7, among others. At the end of the cascade, caspases act on a variety of signal transduction proteins, cytoskeletal and nuclear proteins, chromatin-modifying proteins, DNA repair proteins and endonucleases that destroy the cell by disintegrating its contents, including its DNA. The different caspases have different domain architectures depending upon where they fit into the apoptosis cascades, however they all carry the catalytic p10 and p20 subunits. Caspases can have roles other than in apoptosis, such as caspase-1 (interleukin-1 beta convertase) (3.4.22.36 from EC), which is involved in the inflammatory process. The activation of apoptosis can sometimes lead to caspase-1 activation, providing a link between apoptosis and inflammation, such as during the targeting of infected cells. Caspases may also be involved in cell differentiation [].; GO: 0004197 cysteine-type endopeptidase activity, 0006508 proteolysis; PDB: 1M72_C 2NN3_C 3V4L_A 3IBF_B 2QLF_D 2QLB_C 3IBC_B 2QL9_A 3R5K_B 3H1P_A ....

>KOG1546 consensus Metacaspase involved in regulation of apoptosis [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]

Probab=91.12  E-value=2.2  Score=39.50  Aligned_cols=86  Identities=17%  Similarity=0.337  Sum_probs=54.5

Q ss_pred             cccCCcEEEEEecCCCCccchhh-----hhHHHHHHHH-HhCCCCCCCEEEEecCccCCCCCCCCCCeEEeCCCCCcccc
Q 029459           38 TMHTNNWAVLVCTSRFWFNYRHM-----ANTLSLYRTV-KRLGVPDERIILMLADDMACNARNKYPAQVFNNENHKLNLY  111 (193)
Q Consensus        38 ~~~~~~wAVlVagS~~w~NYRHq-----adv~~~Y~~L-k~~Gipde~IIlm~~DDiA~np~Np~pG~i~~~~~~~~n~Y  111 (193)
                      .-++++-||||.-+  |-|=+++     .||-+|.+.| .+.||+.|+|.+|.-+|     .+|.     ..|       
T Consensus        59 ~~~gkrrAvLiGIN--Y~gTk~ELrGCINDv~~M~~~Lv~rfGFs~ddI~~LtDt~-----~s~~-----~~P-------  119 (362)
T KOG1546|consen   59 QMAGKRRAVLIGIN--YPGTKNELRGCINDVHRMRKLLVERFGFSEDDILMLTDTD-----ESPV-----RIP-------  119 (362)
T ss_pred             cccccceEEEEeec--CCCcHHHHhhhHHHHHHHHHHHHHhhCCChhheEEEecCC-----Cccc-----ccC-------
Confidence            34677889999853  2222332     5788999985 55799999998775222     1211     112       


Q ss_pred             CCCccccCCCCCCCHHHHHHHHcCCCCCCCCCcceecCCCCCcEEEEEeCCCC
Q 029459          112 GDNVEVDYHGYEVNAENFLRVLTGRHKAAVPRSKRLLSDEGSHILLYMTGHGG  164 (193)
Q Consensus       112 ~~~v~IDY~g~~Vt~enfl~VL~G~~~~~~p~~k~l~s~~~dnVFiY~tgHGg  164 (193)
                                   |.+|+.+.|.--.+         ...+.|-+|+=|||||+
T Consensus       120 -------------T~~Nir~Al~wLV~---------~aq~gD~LvfHYSGHGt  150 (362)
T KOG1546|consen  120 -------------TGKNIRRALRWLVE---------SAQPGDSLVFHYSGHGT  150 (362)
T ss_pred             -------------cHHHHHHHHHHHHh---------cCCCCCEEEEEecCCCC
Confidence                         23455666653322         23567999999999998

>PRK10629 EnvZ/OmpR regulon moderator; Provisional

Probab=87.44  E-value=2.4  Score=33.76  Aligned_cols=68  Identities=10%  Similarity=0.018  Sum_probs=42.8

Q ss_pred             cchhccccchh-hHHHHHHHHHHHHHhhhhccccccccccCCcEEEEEecC-CCCccchhhhhHHHHHHHHHhCCCCCCC
Q 029459            2 MVRFKMYNSFG-FKSLAAMLLFFILSISISYRASAETTMHTNNWAVLVCTS-RFWFNYRHMANTLSLYRTVKRLGVPDER   79 (193)
Q Consensus         2 ~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~wAVlVagS-~~w~NYRHqadv~~~Y~~Lk~~Gipde~   79 (193)
                      |.+.+|-+|+- .|-+..++++.  .+.+-++.      -++.-||=|+++ +|=--    .|...+||.|++.||+.+.
T Consensus         1 ~~~~~m~nryp~WKylli~~vl~--~lyAlPnl------ygedpavQIs~~~~g~~~----~~~~~v~~~L~~~gI~~ks   68 (127)
T PRK10629          1 MINPRMSLRQLAWLGAVLLLLAA--LLLAWSAL------RQQESTLAIRAVHQGASL----PDGFYVYQHLDANGIHIKS   68 (127)
T ss_pred             CCcchhccccHHHHHHHHHHHHH--HHHHChhc------cCCCceEEEecCCCCCcc----chHHHHHHHHHHCCCCcce
Confidence            56677777777 44431111111  23333333      344558888876 55322    8999999999999999887


Q ss_pred             EE
Q 029459           80 II   81 (193)
Q Consensus        80 II   81 (193)
                      |.
T Consensus        69 i~   70 (127)
T PRK10629         69 IT   70 (127)
T ss_pred             EE
Confidence            75

>KOG1017 consensus Predicted uracil phosphoribosyltransferase [General function prediction only]

Probab=81.95  E-value=1.4  Score=38.72  Aligned_cols=23  Identities=35%  Similarity=0.508  Sum_probs=21.2

Q ss_pred             hHHHHHHHHHhCCCCCCCEEEEe
Q 029459           62 NTLSLYRTVKRLGVPDERIILML   84 (193)
Q Consensus        62 dv~~~Y~~Lk~~Gipde~IIlm~   84 (193)
                      -||.+-..||++|+||++|||..
T Consensus       204 TV~~Av~VL~EhgVp~s~IiL~s  226 (267)
T KOG1017|consen  204 TVCKAVEVLKEHGVPDSNIILVS  226 (267)
T ss_pred             cHHHHHHHHHHcCCCcccEEEEE
Confidence            59999999999999999999874

>COG2949 SanA Uncharacterized membrane protein [Function unknown]

Probab=80.50  E-value=4.7  Score=35.42  Aligned_cols=47  Identities=23%  Similarity=0.454  Sum_probs=36.3

Q ss_pred             cccccCCcEEEEEecCCC--------Cccchhhhh-------------------------HHHHHHHHHhCCCCCCCEEE
Q 029459           36 ETTMHTNNWAVLVCTSRF--------WFNYRHMAN-------------------------TLSLYRTVKRLGVPDERIIL   82 (193)
Q Consensus        36 ~~~~~~~~wAVlVagS~~--------w~NYRHqad-------------------------v~~~Y~~Lk~~Gipde~IIl   82 (193)
                      .++-+..+.+|+..||++        ||-||-+|-                         .-.|-+.|++.|+|.++|.+
T Consensus        51 ~~~lP~r~vgvVLGtsky~~~g~~N~yy~~Ri~aA~~ly~~gKV~~LLlSGDN~~~sYnEp~tM~kdL~~~GVp~~~i~l  130 (235)
T COG2949          51 IQDLPARQVGVVLGTSKYLAKGPPNRYYTYRIDAAIALYKAGKVNYLLLSGDNATVSYNEPRTMRKDLIAAGVPAKNIFL  130 (235)
T ss_pred             hhhCCccceEEEEeccccccCCCccHhHHHHHHHHHHHHhcCCeeEEEEecCCCcccccchHHHHHHHHHcCCCHHHeee
Confidence            355678889999998854        455777653                         45688899999999999975

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	193
3bij_A	285	Uncharacterized protein GSU0716; alpha-beta protei	98.2
4af8_A	367	Metacaspase MCA2; hydrolase, cysteine peptidase, c	98.01
4f6o_A	350	Metacaspase-1; rossmann fold, hydrolase; HET: DFH;	97.76
3uoa_B	390	Mucosa-associated lymphoid tissue lymphoma transl	93.97

>3bij_A Uncharacterized protein GSU0716; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.50A {Geobacter sulfurreducens pca}

Probab=98.20  E-value=1.4e-06  Score=74.95  Aligned_cols=100  Identities=16%  Similarity=0.261  Sum_probs=70.5

Q ss_pred             CCcEEEEEecCCC----C---c-cch-hhhhHHHHHHHHHhCCCCCCCEEEEecCccCCCCCCCCCCeEEeCCCCCcccc
Q 029459           41 TNNWAVLVCTSRF----W---F-NYR-HMANTLSLYRTVKRLGVPDERIILMLADDMACNARNKYPAQVFNNENHKLNLY  111 (193)
Q Consensus        41 ~~~wAVlVagS~~----w---~-NYR-Hqadv~~~Y~~Lk~~Gipde~IIlm~~DDiA~np~Np~pG~i~~~~~~~~n~Y  111 (193)
                      ++.||+||.-+++    |   . +-+ =..|+..+.++|++.|++   |++++-++                        
T Consensus         2 ~~~~ALlIGi~~Y~~~~Y~~~~~~L~~~~nDa~~~~~~L~~~Gf~---v~~l~~~~------------------------   54 (285)
T 3bij_A            2 PKGIALALGLNAVDPKHYGGWAGKLNACEADAEDMAAIAAERGFA---VTTLMTKA------------------------   54 (285)
T ss_dssp             CCEEEEEEECSCCCTTTTTTCCCCCSSHHHHHHHHHHHHHHTTCE---EEEEEGGG------------------------
T ss_pred             CceEEEEEEeCCccccccCCCcccCCCCHHHHHHHHHHHHHcCCc---eEEecCCc------------------------
Confidence            4689999998873    2   1 111 248999999999999997   65555221                        


Q ss_pred             CCCccccCCCCCCCHHHHHHHHcCCCCCCCCCcceecCCCCCcEEEEEeCCCC-------------CCeeecCCCCccCH
Q 029459          112 GDNVEVDYHGYEVNAENFLRVLTGRHKAAVPRSKRLLSDEGSHILLYMTGHGG-------------DEFLKFQDSEELQS  178 (193)
Q Consensus       112 ~~~v~IDY~g~~Vt~enfl~VL~G~~~~~~p~~k~l~s~~~dnVFiY~tgHGg-------------~g~i~fpd~~~l~a  178 (193)
                                  .|.+++++.|..-..         ...++|.+|+||+|||.             +++|...|. .+..
T Consensus        55 ------------~t~~~i~~al~~l~~---------~~~~~D~~~~yfSGHG~~~~~~~g~e~dg~~~~l~p~D~-~i~~  112 (285)
T 3bij_A           55 ------------ATRAKVIDAIGKAAK---------ALGKGDIFMLSYSGHGGQVPDTSNDEPDGVDETWCLFDG-ELID  112 (285)
T ss_dssp             ------------CCHHHHHHHHHHHHH---------HCCTTCEEEEEEESCEEEEECTTSCCTTCEEEEEECSSS-EEEH
T ss_pred             ------------cCHHHHHHHHHHHHH---------hCCCCCEEEEEEcCCcccccCCCCCccCCCcceEEecCC-CccH
Confidence                        466777776653221         24578999999999996             257777674 5778


Q ss_pred             HHHHHHHHHHH
Q 029459          179 HDLADAVKQMK  189 (193)
Q Consensus       179 ~dL~~~l~~M~  189 (193)
                      +||.+.|+.|.
T Consensus       113 ~~l~~~l~~l~  123 (285)
T 3bij_A          113 DELYALLGKFA  123 (285)
T ss_dssp             HHHHHHHTTSC
T ss_pred             HHHHHHHHhcc
Confidence            89999887764

>4af8_A Metacaspase MCA2; hydrolase, cysteine peptidase, caspase/hemoglobin fold; 1.40A {Trypanosoma brucei} PDB: 4afp_A 4afv_A 4afr_A

Probab=98.01  E-value=2.1e-05  Score=71.00  Aligned_cols=112  Identities=13%  Similarity=0.258  Sum_probs=74.7

Q ss_pred             ccccCCcEEEEEecCCCC--ccchh-hhhHHHHHHHHHhCCCCCCCEEEEecCccCCCCCCCCCCeEEeCCCCCccccCC
Q 029459           37 TTMHTNNWAVLVCTSRFW--FNYRH-MANTLSLYRTVKRLGVPDERIILMLADDMACNARNKYPAQVFNNENHKLNLYGD  113 (193)
Q Consensus        37 ~~~~~~~wAVlVagS~~w--~NYRH-qadv~~~Y~~Lk~~Gipde~IIlm~~DDiA~np~Np~pG~i~~~~~~~~n~Y~~  113 (193)
                      ....+++||+||.-+.+=  .+-+- ..|+-.+.+.|++.|++.++|+++.-++     .  .|+               
T Consensus        87 ~~~~grr~ALlIGIn~Y~~~~~L~g~vnDA~~m~~~L~~~GF~~~~i~~L~D~~-----~--~p~---------------  144 (367)
T 4af8_A           87 PLPGQTVRALFIGINYYGTSAALSGCCNDVKQMLATLQKRGLPINEAVILVDED-----N--FPG---------------  144 (367)
T ss_dssp             CCTTCCEEEEEEECCCTTSTTCCSSHHHHHHHHHHHHHHTTCCCSEEEEEECCT-----T--CTT---------------
T ss_pred             CCCCCCeEEEEEEeCCCCCccCCCCHHHHHHHHHHHHHHcCCCchheEEecccc-----c--ccc---------------
Confidence            346788999999988421  11111 4788999999999999999988875222     1  111               


Q ss_pred             CccccCCCCCCCHHHHHHHHcCCCCCCCCCcceecCCCCCcEEEEEeCCCCC---------C---eeecCCC---CccCH
Q 029459          114 NVEVDYHGYEVNAENFLRVLTGRHKAAVPRSKRLLSDEGSHILLYMTGHGGD---------E---FLKFQDS---EELQS  178 (193)
Q Consensus       114 ~v~IDY~g~~Vt~enfl~VL~G~~~~~~p~~k~l~s~~~dnVFiY~tgHGg~---------g---~i~fpd~---~~l~a  178 (193)
                            .....|.+++++.|.--..         ...++|.+|+||+|||..         |   .|.-.|.   ..|..
T Consensus       145 ------~~~~pTr~nI~~aL~~L~~---------~a~pgD~l~fyFSGHG~q~~d~~de~dg~De~LvP~D~~~~g~I~d  209 (367)
T 4af8_A          145 ------RTDQPTRDNIVRYMAWLVK---------DAKPGDVLFFHYSGHGTQCKSRGDSDEKYDQCIAPVDFQKSGCIVD  209 (367)
T ss_dssp             ------CCBCCCHHHHHHHHHHHHH---------TCCTTCEEEEEEESCEEEECCC-----CCEEEECCTTHHHHCCEEH
T ss_pred             ------cccCCCHHHHHHHHHHHHH---------hCCCCCEEEEEEcCCcCccCCCCCCCCCcceEEEeecCCcCCCccH
Confidence                  0235577888887752211         246789999999999972         2   3554442   25778


Q ss_pred             HHHHHHH
Q 029459          179 HDLADAV  185 (193)
Q Consensus       179 ~dL~~~l  185 (193)
                      +||.+.|
T Consensus       210 deL~~lL  216 (367)
T 4af8_A          210 DDIHKLL  216 (367)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            8888773

>4f6o_A Metacaspase-1; rossmann fold, hydrolase; HET: DFH; 1.68A {Saccharomyces cerevisiae}

Probab=97.76  E-value=6.3e-05  Score=67.50  Aligned_cols=111  Identities=14%  Similarity=0.239  Sum_probs=74.2

Q ss_pred             ccccCCcEEEEEecCCC--Cccch-hhhhHHHHHHHHHhC-CCCCCCEEEEecCccCCCCCCCCCCeEEeCCCCCccccC
Q 029459           37 TTMHTNNWAVLVCTSRF--WFNYR-HMANTLSLYRTVKRL-GVPDERIILMLADDMACNARNKYPAQVFNNENHKLNLYG  112 (193)
Q Consensus        37 ~~~~~~~wAVlVagS~~--w~NYR-Hqadv~~~Y~~Lk~~-Gipde~IIlm~~DDiA~np~Np~pG~i~~~~~~~~n~Y~  112 (193)
                      +...+++|||||.-+.+  +.+-+ =..|+-.+.+.|++. |+++++|+++.-++     .+|                 
T Consensus        48 s~~~grr~ALlIGIn~Y~~~~~L~g~vnDA~~m~~~L~~~~Gf~~~~I~lLtd~~-----~~~-----------------  105 (350)
T 4f6o_A           48 SQCTGRRKALIIGINYIGSKNQLRGCINDAHNIFNFLTNGYGYSSDDIVILTDDQ-----NDL-----------------  105 (350)
T ss_dssp             CCCCSCEEEEEEECCCTTSTTCCSSHHHHHHHHHHHHHHHSCCCGGGEEEEETTS-----SCG-----------------
T ss_pred             CCCCCCEEEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCccceeeecccc-----ccc-----------------
Confidence            34577899999999632  11111 136888999999884 99999998765221     110                 


Q ss_pred             CCccccCCCCCCCHHHHHHHHcCCCCCCCCCcceecCCCCCcEEEEEeCCCCC-------------CeeecCCC---Ccc
Q 029459          113 DNVEVDYHGYEVNAENFLRVLTGRHKAAVPRSKRLLSDEGSHILLYMTGHGGD-------------EFLKFQDS---EEL  176 (193)
Q Consensus       113 ~~v~IDY~g~~Vt~enfl~VL~G~~~~~~p~~k~l~s~~~dnVFiY~tgHGg~-------------g~i~fpd~---~~l  176 (193)
                              ....|.+++++.|.--..         ...+.|.+|+||+|||..             +.|.-.|.   ..|
T Consensus       106 --------~~~pTr~nI~~aL~~L~~---------~a~pgD~llfYFSGHG~q~~d~~gdE~dG~De~lvP~D~~~~g~I  168 (350)
T 4f6o_A          106 --------VRVPTRANMIRAMQWLVK---------DAQPNDSLFLHYSGHGGQTEDLDGDEEDGMDDVIYPVDFETQGPI  168 (350)
T ss_dssp             --------GGSCCHHHHHHHHHHHHT---------TCCTTCEEEEEEESCEEEC-----------CEEECCTTHHHHCCE
T ss_pred             --------ccCCCHHHHHHHHHHHHH---------hCCCCCEEEEEEcCCceeccCCCCCcccCCceEEEeccCCcCCcc
Confidence                    123577888888852211         146789999999999972             23555452   258


Q ss_pred             CHHHHHHHHH
Q 029459          177 QSHDLADAVK  186 (193)
Q Consensus       177 ~a~dL~~~l~  186 (193)
                      ..+||.+.|.
T Consensus       169 ~ddeL~~~L~  178 (350)
T 4f6o_A          169 IDDEMHDIMV  178 (350)
T ss_dssp             EHHHHHHHHT
T ss_pred             cHHHHHHHHH
Confidence            8899988775

>3uoa_B Mucosa-associated lymphoid tissue lymphoma transl protein 1; paracaspase, lymphoma, NF-KB signalling, caspase fold, immun fold, hydrolase-hydrolase inhibitor complex; 1.75A {Homo sapiens} PDB: 3uo8_B 3v55_A 3v4l_A* 3v4o_A*

Probab=93.97  E-value=0.13  Score=46.53  Aligned_cols=99  Identities=15%  Similarity=0.256  Sum_probs=62.8

Q ss_pred             cCCcEEEEEecCCCCc--cch-hhhhHHHHHHHHHhCCCCCCCEEEEecCccCCCCCCCCCCeEEeCCCCCccccCCCcc
Q 029459           40 HTNNWAVLVCTSRFWF--NYR-HMANTLSLYRTVKRLGVPDERIILMLADDMACNARNKYPAQVFNNENHKLNLYGDNVE  116 (193)
Q Consensus        40 ~~~~wAVlVagS~~w~--NYR-Hqadv~~~Y~~Lk~~Gipde~IIlm~~DDiA~np~Np~pG~i~~~~~~~~n~Y~~~v~  116 (193)
                      .+.++|+||+-+++-.  +-+ =..|+-.+.+.|++.|++   +.+                  +.              
T Consensus         3 A~~r~ALIIGn~~Y~~~~~L~ga~~DA~~L~~~L~~lGF~---V~~------------------l~--------------   47 (390)
T 3uoa_B            3 AKDKVALLIGNMNYREHPKLKAPLVDVYELTNLLRQLDFK---VVS------------------LL--------------   47 (390)
T ss_dssp             BSCEEEEEEECCCCSSSCCCSTHHHHHHHHHHHHHHTTCE---EEE------------------EE--------------
T ss_pred             CCCCEEEEEEecCCCCcccCCChHHHHHHHHHHHHHcCCe---EEE------------------ee--------------
Confidence            3568999999887642  111 137899999999999985   211                  11              


Q ss_pred             ccCCCCCCCHHHHHHHHcCCCCCCCCCcceecCCCCCcEEEEEeCCCCC----CeeecCCCC-------ccCHHHHHHHH
Q 029459          117 VDYHGYEVNAENFLRVLTGRHKAAVPRSKRLLSDEGSHILLYMTGHGGD----EFLKFQDSE-------ELQSHDLADAV  185 (193)
Q Consensus       117 IDY~g~~Vt~enfl~VL~G~~~~~~p~~k~l~s~~~dnVFiY~tgHGg~----g~i~fpd~~-------~l~a~dL~~~l  185 (193)
                            |+|.+++.+.|.--...         ..+.|.+++||+|||..    +||.=.|..       .+..++|.+.|
T Consensus        48 ------DlT~~eI~~aL~~f~~~---------~~~~D~~l~yfsGHG~~~~g~~yL~p~Da~~~~~~~~~isl~~Ll~~l  112 (390)
T 3uoa_B           48 ------DLTEYEMRNAVDEFLLL---------LDKGVYGLLYYAGHGYENFGNSFMVPVDAPNPYRSENCLCVQNILKLM  112 (390)
T ss_dssp             ------SCCHHHHHHHHHHHHHT---------CCTTCEEEEEEESCEEEETTEEEECCTTCCSSCCGGGSEEHHHHHHHH
T ss_pred             ------cCCHHHHHHHHHHHHhh---------CCCCCEEEEEEecCccccCCcceEEecCCCccccccceeeHHHHHHHH
Confidence                  13566777776632211         14579999999999953    665443432       36667776666


Q ss_pred             HHH
Q 029459          186 KQM  188 (193)
Q Consensus       186 ~~M  188 (193)
                      +..
T Consensus       113 ~~~  115 (390)
T 3uoa_B          113 QEK  115 (390)
T ss_dssp             HHT
T ss_pred             Hhc
Confidence            543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	193
g1qtn.1	242	Caspase-8 {Human (Homo sapiens) [TaxId: 9606]}	82.69
g1pyo.1	257	Caspase-2 {Human (Homo sapiens) [TaxId: 9606]}	81.33