Citrus Sinensis ID: 029460

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190---
MNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGRAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPANCASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPECLAGI
ccccccccccEEEEEEEccccccccEEEEEEEEccccccEEEEEcccccccccEEEEEEEcccEEEEEEccEEEEEEEcccccccccccccEEEEEEccccccccccccEEEccccccEEEEEEEEEEEcccccccccccccccccccccccccccHHHHHHHHHHHcccEEEEccccccccccccccccccc
ccccccccccEEEEEEccccccccEEEEEEEEEccEccccEEEEcccccccccEEEEEEEEccEEEEEEccccEEEEEcccccccccccccEEEEEccccccHHHccccEEcccccccEEEEEEccccccEEcccccccccccccccccHHHHHccHHHHHHHHHHHHccEEEEcccccccccccccccEccc
mnsntenvrdeldfeflgnrtgqpytvqtniyangkgdreqrvnlwfdpaadyHLYTILWNHHHIvfyvddvpirvyknsgrapfpmnqpmgvystlweaddwatrgglekidwskapfyayyrdfdiegcpvpgpancasnpgnwweaNNYQALTAMEARRYRWVRLNHMIYdyctdksrypvpppeclagi
mnsntenvrdeldfeflgnrtgqpytVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNsgrapfpmnqPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPANCASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDyctdksrypvppPECLAGI
MNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGRAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPANCASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPECLAGI
************DFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGRAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPANCASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSR************
*****EN*RDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGRAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPANCASNP*************AMEARRYRWVRLNHMIYDYCTDKSRYPVPPPECLAGI
********RDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGRAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPANCASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPECLAGI
*******VRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGRAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPANC****GNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPECLAG*
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGRAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPANCASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPECLAGI
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query193 2.2.26 [Sep-21-2011]
Q8LF99292 Probable xyloglucan endot yes no 0.989 0.654 0.797 5e-92
Q8LER3293 Probable xyloglucan endot no no 1.0 0.658 0.758 2e-89
Q9XIW1293 Probable xyloglucan endot no no 0.968 0.638 0.578 1e-64
Q40144296 Probable xyloglucan endot N/A no 0.932 0.608 0.578 7e-63
P93349295 Probable xyloglucan endot N/A no 0.932 0.610 0.583 9e-63
Q6YDN9295 Xyloglucan endotransgluco N/A no 0.968 0.633 0.563 7e-62
Q41542293 Probable xyloglucan endot N/A no 0.968 0.638 0.568 2e-61
Q8LNZ5293 Probable xyloglucan endot N/A no 0.932 0.614 0.573 5e-61
Q39857295 Probable xyloglucan endot no no 0.932 0.610 0.592 1e-60
Q39099296 Xyloglucan endotransgluco no no 0.968 0.631 0.552 1e-60
>sp|Q8LF99|XTH6_ARATH Probable xyloglucan endotransglucosylase/hydrolase protein 6 OS=Arabidopsis thaliana GN=XTH6 PE=2 SV=2 Back     alignment and function desciption
 Score =  336 bits (862), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 154/193 (79%), Positives = 171/193 (88%), Gaps = 2/193 (1%)

Query: 1   MNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILW 60
           MNS+T  VRDELDFEFLGNR+GQPY+VQTNI+A+GKGDREQRVNLWFDP+ DYH YTILW
Sbjct: 100 MNSDTATVRDELDFEFLGNRSGQPYSVQTNIFAHGKGDREQRVNLWFDPSMDYHTYTILW 159

Query: 61  NHHHIVFYVDDVPIRVYKN--SGRAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAP 118
           +H HIVFYVDDVPIR YKN  +    +P +QPMGVYSTLWEADDWATRGGLEKIDWSKAP
Sbjct: 160 SHKHIVFYVDDVPIREYKNNEAKNIAYPTSQPMGVYSTLWEADDWATRGGLEKIDWSKAP 219

Query: 119 FYAYYRDFDIEGCPVPGPANCASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTD 178
           FYAYY+DFDIEGCPVPGP  C SNP NWWE   YQ+L A+EARRYRWVR+NHM+YDYCTD
Sbjct: 220 FYAYYKDFDIEGCPVPGPTFCPSNPHNWWEGYAYQSLNAVEARRYRWVRVNHMVYDYCTD 279

Query: 179 KSRYPVPPPECLA 191
           +SR+PVPPPEC A
Sbjct: 280 RSRFPVPPPECRA 292
Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 2EC: 0EC: 7
>sp|Q8LER3|XTH7_ARATH Probable xyloglucan endotransglucosylase/hydrolase protein 7 OS=Arabidopsis thaliana GN=XTH7 PE=2 SV=2 Back     alignment and function description
>sp|Q9XIW1|XTH5_ARATH Probable xyloglucan endotransglucosylase/hydrolase protein 5 OS=Arabidopsis thaliana GN=XTH5 PE=2 SV=1 Back     alignment and function description
>sp|Q40144|XTH1_SOLLC Probable xyloglucan endotransglucosylase/hydrolase 1 OS=Solanum lycopersicum GN=XTH1 PE=2 SV=1 Back     alignment and function description
>sp|P93349|XTH_TOBAC Probable xyloglucan endotransglucosylase/hydrolase protein OS=Nicotiana tabacum GN=XTH PE=2 SV=1 Back     alignment and function description
>sp|Q6YDN9|XTH_BRAOB Xyloglucan endotransglucosylase/hydrolase OS=Brassica oleracea var. botrytis GN=XET16A PE=1 SV=1 Back     alignment and function description
>sp|Q41542|XTH_WHEAT Probable xyloglucan endotransglucosylase/hydrolase OS=Triticum aestivum GN=XTH PE=2 SV=1 Back     alignment and function description
>sp|Q8LNZ5|XTHB_PHAAN Probable xyloglucan endotransglucosylase/hydrolase protein B OS=Phaseolus angularis GN=XTHB PE=2 SV=1 Back     alignment and function description
>sp|Q39857|XTH_SOYBN Probable xyloglucan endotransglucosylase/hydrolase (Fragment) OS=Glycine max GN=XTH PE=2 SV=1 Back     alignment and function description
>sp|Q39099|XTH4_ARATH Xyloglucan endotransglucosylase/hydrolase protein 4 OS=Arabidopsis thaliana GN=XTH4 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query193
308229784290 xyloglucan endotransglucosylase/hydrolas 1.0 0.665 0.861 3e-98
255582395229 Xyloglucan endotransglucosylase/hydrolas 1.0 0.842 0.876 5e-98
308229782289 xyloglucan endotransglucosylase/hydrolas 1.0 0.667 0.856 7e-98
308229792290 putative xyloglucan endotransglucosylase 1.0 0.665 0.856 8e-98
124109183 294 xyloglucan endotransglycosylase/hydrolas 1.0 0.656 0.856 1e-97
308229790289 putative xyloglucan endotransglucosylase 1.0 0.667 0.851 2e-97
224095005 296 predicted protein [Populus trichocarpa] 1.0 0.652 0.841 2e-96
356497025 294 PREDICTED: probable xyloglucan endotrans 1.0 0.656 0.846 1e-95
308229788289 putative xyloglucan endotransglucosylase 1.0 0.667 0.830 3e-95
340396652293 xyloglucan endotransglucosylase/hydrolas 1.0 0.658 0.820 4e-95
>gi|308229784|gb|ADO24300.1| xyloglucan endotransglucosylase/hydrolase [Gossypium hirsutum] Back     alignment and taxonomy information
 Score =  362 bits (930), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 168/195 (86%), Positives = 179/195 (91%), Gaps = 2/195 (1%)

Query: 1   MNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILW 60
           MNS+T+ VRDELDFEFLGNRTGQPYTVQTNIYA+GKGDREQRVNLWFDPAAD+H YTI+W
Sbjct: 96  MNSDTDTVRDELDFEFLGNRTGQPYTVQTNIYAHGKGDREQRVNLWFDPAADFHTYTIMW 155

Query: 61  NHHHIVFYVDDVPIRVYKN--SGRAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAP 118
           NHHHIVFYVD+VPIRVYKN  +   P+P  QPMGVYSTLWEADDWATRGGLEKIDWSKAP
Sbjct: 156 NHHHIVFYVDEVPIRVYKNNEAKNIPYPKFQPMGVYSTLWEADDWATRGGLEKIDWSKAP 215

Query: 119 FYAYYRDFDIEGCPVPGPANCASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTD 178
           F AYY+DFDIEGCPVPGPANCASNP NWWE   YQAL AMEARRYRWVR+NHMIYDYCTD
Sbjct: 216 FLAYYKDFDIEGCPVPGPANCASNPRNWWEGTAYQALNAMEARRYRWVRMNHMIYDYCTD 275

Query: 179 KSRYPVPPPECLAGI 193
           KSRYPV PPEC+AGI
Sbjct: 276 KSRYPVTPPECMAGI 290

Source: Gossypium hirsutum

Species: Gossypium hirsutum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255582395|ref|XP_002531986.1| Xyloglucan endotransglucosylase/hydrolase protein 9 precursor, putative [Ricinus communis] gi|223528345|gb|EEF30385.1| Xyloglucan endotransglucosylase/hydrolase protein 9 precursor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|308229782|gb|ADO24299.1| xyloglucan endotransglucosylase/hydrolase [Gossypium hirsutum] Back     alignment and taxonomy information
>gi|308229792|gb|ADO24304.1| putative xyloglucan endotransglucosylase/hydrolase [Gossypium hirsutum] Back     alignment and taxonomy information
>gi|124109183|gb|ABM91067.1| xyloglucan endotransglycosylase/hydrolase precursor XTH-36 [Populus tremula x Populus tremuloides] Back     alignment and taxonomy information
>gi|308229790|gb|ADO24303.1| putative xyloglucan endotransglucosylase/hydrolase [Gossypium hirsutum] Back     alignment and taxonomy information
>gi|224095005|ref|XP_002310324.1| predicted protein [Populus trichocarpa] gi|222853227|gb|EEE90774.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356497025|ref|XP_003517365.1| PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 6-like [Glycine max] Back     alignment and taxonomy information
>gi|308229788|gb|ADO24302.1| putative xyloglucan endotransglucosylase/hydrolase [Gossypium hirsutum] Back     alignment and taxonomy information
>gi|340396652|gb|AEK32594.1| xyloglucan endotransglucosylase/hydrolase [Tagetes patula] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query193
TAIR|locus:2169990292 XTH6 "xyloglucan endotransgluc 0.989 0.654 0.797 1.4e-89
TAIR|locus:2137609293 XTH7 "xyloglucan endotransgluc 1.0 0.658 0.758 2.3e-87
TAIR|locus:2159118293 XTH5 "xyloglucan endotransgluc 0.968 0.638 0.578 3.3e-63
TAIR|locus:2065821296 XTH4 "xyloglucan endotransgluc 0.968 0.631 0.552 5.7e-59
TAIR|locus:2823919305 XTH8 "xyloglucan endotransgluc 0.937 0.593 0.561 9.3e-59
TAIR|locus:2125437290 XTH9 "xyloglucan endotransgluc 0.974 0.648 0.525 7.8e-55
TAIR|locus:2086959290 XTH3 "xyloglucan endotransgluc 0.922 0.613 0.521 1.5e-53
TAIR|locus:2064284299 XTH10 "xyloglucan endotransglu 0.974 0.628 0.510 3.8e-53
TAIR|locus:2095168291 XTH16 "xyloglucan endotransglu 0.932 0.618 0.534 5.6e-52
TAIR|locus:2162652282 XTH20 "xyloglucan endotransglu 0.906 0.620 0.5 7.2e-52
TAIR|locus:2169990 XTH6 "xyloglucan endotransglucosylase/hydrolase 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 894 (319.8 bits), Expect = 1.4e-89, P = 1.4e-89
 Identities = 154/193 (79%), Positives = 171/193 (88%)

Query:     1 MNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILW 60
             MNS+T  VRDELDFEFLGNR+GQPY+VQTNI+A+GKGDREQRVNLWFDP+ DYH YTILW
Sbjct:   100 MNSDTATVRDELDFEFLGNRSGQPYSVQTNIFAHGKGDREQRVNLWFDPSMDYHTYTILW 159

Query:    61 NHHHIVFYVDDVPIRVYKNSG--RAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAP 118
             +H HIVFYVDDVPIR YKN+      +P +QPMGVYSTLWEADDWATRGGLEKIDWSKAP
Sbjct:   160 SHKHIVFYVDDVPIREYKNNEAKNIAYPTSQPMGVYSTLWEADDWATRGGLEKIDWSKAP 219

Query:   119 FYAYYRDFDIEGCPVPGPANCASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTD 178
             FYAYY+DFDIEGCPVPGP  C SNP NWWE   YQ+L A+EARRYRWVR+NHM+YDYCTD
Sbjct:   220 FYAYYKDFDIEGCPVPGPTFCPSNPHNWWEGYAYQSLNAVEARRYRWVRVNHMVYDYCTD 279

Query:   179 KSRYPVPPPECLA 191
             +SR+PVPPPEC A
Sbjct:   280 RSRFPVPPPECRA 292
GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA
GO:0005576 "extracellular region" evidence=ISM
GO:0005618 "cell wall" evidence=IEA
GO:0005975 "carbohydrate metabolic process" evidence=IEA
GO:0006073 "cellular glucan metabolic process" evidence=IEA
GO:0016762 "xyloglucan:xyloglucosyl transferase activity" evidence=IEA
GO:0016798 "hydrolase activity, acting on glycosyl bonds" evidence=ISS
GO:0048046 "apoplast" evidence=IEA
GO:0009414 "response to water deprivation" evidence=IEP
GO:0009269 "response to desiccation" evidence=RCA
GO:0009409 "response to cold" evidence=RCA
GO:0009651 "response to salt stress" evidence=RCA
GO:0009737 "response to abscisic acid stimulus" evidence=RCA
TAIR|locus:2137609 XTH7 "xyloglucan endotransglucosylase/hydrolase 7" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2159118 XTH5 "xyloglucan endotransglucosylase/hydrolase 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2065821 XTH4 "xyloglucan endotransglucosylase/hydrolase 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2823919 XTH8 "xyloglucan endotransglucosylase/hydrolase 8" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2125437 XTH9 "xyloglucan endotransglucosylase/hydrolase 9" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2086959 XTH3 "xyloglucan endotransglucosylase/hydrolase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2064284 XTH10 "xyloglucan endotransglucosylase/hydrolase 10" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2095168 XTH16 "xyloglucan endotransglucosylase/hydrolase 16" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2162652 XTH20 "xyloglucan endotransglucosylase/hydrolase 20" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q8LF99XTH6_ARATH2, ., 4, ., 1, ., 2, 0, 70.79790.98960.6541yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query193
cd02176263 cd02176, GH16_XET, Xyloglucan endotransglycosylase 1e-119
PLN03161291 PLN03161, PLN03161, Probable xyloglucan endotransg 5e-73
pfam00722174 pfam00722, Glyco_hydro_16, Glycosyl hydrolases fam 3e-52
cd02183203 cd02183, GH16_fungal_CRH1_transglycosylase, glycos 4e-23
pfam0695551 pfam06955, XET_C, Xyloglucan endo-transglycosylase 2e-19
cd02175212 cd02175, GH16_lichenase, lichenase, member of glyc 2e-15
cd00413210 cd00413, Glyco_hydrolase_16, glycosyl hydrolase fa 3e-13
COG2273355 COG2273, SKN1, Beta-glucanase/Beta-glucan syntheta 5e-11
cd08023235 cd08023, GH16_laminarinase_like, Laminarinase, mem 2e-06
>gnl|CDD|185685 cd02176, GH16_XET, Xyloglucan endotransglycosylase, member of glycosyl hydrolase family 16 Back     alignment and domain information 
 Score =  337 bits (867), Expect = e-119
 Identities = 113/193 (58%), Positives = 143/193 (74%), Gaps = 4/193 (2%)

Query: 1   MNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILW 60
           ++S   +  DE+DFEFLGN TGQPYT+QTN++ANG G REQR+ LWFDP AD+H Y+ILW
Sbjct: 71  LSSQGPDNHDEIDFEFLGNVTGQPYTLQTNVFANGVGGREQRIYLWFDPTADFHTYSILW 130

Query: 61  NHHHIVFYVDDVPIRVYKNSGR--APFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAP 118
           N H IVFYVDDVPIRV+KN+     P+P +QPMGVY+++W+  DWAT+GG  KIDWS AP
Sbjct: 131 NPHQIVFYVDDVPIRVFKNNEALGVPYPSSQPMGVYASIWDGSDWATQGGRVKIDWSYAP 190

Query: 119 FYAYYRDFDIEGCPVPGPANCASNPG--NWWEANNYQALTAMEARRYRWVRLNHMIYDYC 176
           F A YRDF ++GC V    + +S     +WW  + YQ L+A + R   WVR N+M+YDYC
Sbjct: 191 FVASYRDFKLDGCVVDPGDSFSSCSCTEDWWNGSTYQQLSANQQRAMEWVRRNYMVYDYC 250

Query: 177 TDKSRYPVPPPEC 189
            D+ RYPVPPPEC
Sbjct: 251 DDRKRYPVPPPEC 263

Xyloglucan endotransglycosylases (XETs) cleave and religate xyloglucan polymers in plant cell walls via a transglycosylation mechanism. Xyloglucan is a soluble hemicellulose with a backbone of beta-1,4-linked glucose units, partially substituted with alpha-1,6-linked xylopyranose branches. It binds noncovalently to cellulose, cross-linking the adjacent cellulose microfibrils, giving it a key structural role as a matrix polymer. Therefore, XET plays an important role in all plant processes that require cell wall remodeling. Length = 263
>gnl|CDD|178706 PLN03161, PLN03161, Probable xyloglucan endotransglucosylase/hydrolase protein; Provisional Back     alignment and domain information
>gnl|CDD|216081 pfam00722, Glyco_hydro_16, Glycosyl hydrolases family 16 Back     alignment and domain information
>gnl|CDD|185692 cd02183, GH16_fungal_CRH1_transglycosylase, glycosylphosphatidylinositol-glucanosyltransferase Back     alignment and domain information
>gnl|CDD|219239 pfam06955, XET_C, Xyloglucan endo-transglycosylase (XET) C-terminus Back     alignment and domain information
>gnl|CDD|185684 cd02175, GH16_lichenase, lichenase, member of glycosyl hydrolase family 16 Back     alignment and domain information
>gnl|CDD|185683 cd00413, Glyco_hydrolase_16, glycosyl hydrolase family 16 Back     alignment and domain information
>gnl|CDD|225182 COG2273, SKN1, Beta-glucanase/Beta-glucan synthetase [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|185693 cd08023, GH16_laminarinase_like, Laminarinase, member of the glycosyl hydrolase family 16 Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 193
PLN03161291 Probable xyloglucan endotransglucosylase/hydrolase 100.0
cd02176263 GH16_XET Xyloglucan endotransglycosylase, member o 100.0
cd02183203 GH16_fungal_CRH1_transglycosylase glycosylphosphat 99.97
cd02175212 GH16_lichenase lichenase, member of glycosyl hydro 99.94
cd02178258 GH16_beta_agarase Beta-agarase, member of glycosyl 99.91
PF00722185 Glyco_hydro_16: Glycosyl hydrolases family 16; Int 99.89
cd08023235 GH16_laminarinase_like Laminarinase, member of the 99.89
cd00413210 Glyco_hydrolase_16 glycosyl hydrolase family 16. T 99.89
PF0695551 XET_C: Xyloglucan endo-transglycosylase (XET) C-te 99.87
cd02182259 GH16_Strep_laminarinase_like Streptomyces laminari 99.84
cd02180295 GH16_fungal_KRE6_glucanase Saccharomyces cerevisia 99.82
cd02177269 GH16_kappa_carrageenase Kappa-carrageenase, member 99.82
cd08024330 GH16_CCF Coelomic cytolytic factor, member of glyc 99.75
cd02179321 GH16_beta_GRP beta-1,3-glucan recognition protein, 99.7
COG2273355 SKN1 Beta-glucanase/Beta-glucan synthetase [Carboh 99.62
PF03935504 SKN1: Beta-glucan synthesis-associated protein (SK 98.97
cd02181293 GH16_fungal_Lam16A_glucanase fungal 1,3(4)-beta-D- 96.54
PF13385157 Laminin_G_3: Concanavalin A-like lectin/glucanases 93.94
PF09264198 Sial-lect-inser: Vibrio cholerae sialidase, lectin 90.55
cd00152201 PTX Pentraxins are plasma proteins characterized b 89.54
smart00560133 LamGL LamG-like jellyroll fold domain. 89.09
smart00159206 PTX Pentraxin / C-reactive protein / pentaxin fami 89.07
PF06439185 DUF1080: Domain of Unknown Function (DUF1080); Int 83.31
>PLN03161 Probable xyloglucan endotransglucosylase/hydrolase protein; Provisional Back     alignment and domain information 
Probab=100.00  E-value=5.5e-68  Score=460.42  Aligned_cols=191  Identities=50%  Similarity=0.990  Sum_probs=175.9

Q ss_pred             CCCCCCCCCCeEeEEEcCCCCCCCcEEEEeEeeCCCCCcceeEecCCCCCCCcEEEEEEEcCCceEEEECCEEEEEEeCC
Q 029460            1 MNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNS   80 (193)
Q Consensus         1 ~~s~~~~~~~EIDiE~lG~~~g~p~~v~tn~~~~g~g~r~~~~~l~fd~t~dFH~Y~i~W~p~~I~fyVDg~~vr~~~~~   80 (193)
                      |+|.++. ||||||||||+++++|+++|||+|.+|.++|++++.|+|||+++||+|+|+|+|++|+|||||++||++++.
T Consensus        92 l~s~~~~-~dEIDiEfLG~~~g~~~~vqtN~y~~g~g~re~~~~l~fDpt~dFHtYsI~Wtp~~I~wyVDG~~iRt~~~~  170 (291)
T PLN03161         92 LSSTGSR-HDEIDFEFLGNVSGQPYTIHTNIYTQGNGSREQQFRPWFDPTADFHNYTIHWNPSEVVWYVDGTPIRVFRNY  170 (291)
T ss_pred             ecCCCCC-CCeEEEEecCCCCCCceEEEeceEeCCcCCcceeccccCCCccCcEEEEEEEchhhEEEEECCEEEEEEEcc
Confidence            3455566 999999999999999999999999999999999999999999999999999999999999999999999876


Q ss_pred             CC--CCCCCCCceEEEEEeeeCCCcccCCCccccCCCCCCEEEEEeEEEEeeecCCC---CCccCCC-CCCcccccCccc
Q 029460           81 GR--APFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPG---PANCASN-PGNWWEANNYQA  154 (193)
Q Consensus        81 ~~--~~~P~~~Pm~l~lnlw~gg~Wat~GG~~~id~~~aPf~a~~~~~~v~~c~~~~---~~~C~~~-~~~w~~~~~~~~  154 (193)
                      +.  .+||+++||+|++|||+|++|||+||++||||+++||+|.|++|+++||.+.+   ...|... +..||+++.|+.
T Consensus       171 ~~~g~~yP~~~pM~i~~siW~g~~wAt~gG~~kidw~~aPf~a~~~~f~~~~C~~~~~~~~~~c~~~~~~~~~~~~~~~~  250 (291)
T PLN03161        171 ENEGIAYPNKQGMRVYSSLWNADNWATQGGRVKIDWTLAPFVARGRRFRARACKWNGPVSIKQCADPTPSNWWTSPSYSQ  250 (291)
T ss_pred             cccCCcCCCccceEEEEeeecCCCcccCCCceeccCCcCCeeEEeeeEEEEeeccCCCCCccccCCCCccccccCccccC
Confidence            54  67998889999999999999999999999999999999999999999998542   3479765 467999888999


Q ss_pred             CCHHHHHHHHHHhhcCeeeecCCCCCCCCC-CCCCccCC
Q 029460          155 LTAMEARRYRWVRLNHMIYDYCTDKSRYPV-PPPECLAG  192 (193)
Q Consensus       155 l~~~~~~~~~~v~~~~m~YdYC~D~~R~~~-~p~EC~~~  192 (193)
                      |+++|+++|+|||+||||||||+|++|||. +||||.++
T Consensus       251 l~~~~~~~~~~v~~~~m~Y~YC~D~~R~~~~~p~EC~~~  289 (291)
T PLN03161        251 LTNAQLTQMKKVRDNFMIYDYCKDTKRFNGVMPPECFKP  289 (291)
T ss_pred             CCHHHHHHHHHHHhCcEEEeccCCCCcCCCCcCcccCCC
Confidence            999999999999999999999999999998 89999764

>cd02176 GH16_XET Xyloglucan endotransglycosylase, member of glycosyl hydrolase family 16 Back     alignment and domain information
>cd02183 GH16_fungal_CRH1_transglycosylase glycosylphosphatidylinositol-glucanosyltransferase Back     alignment and domain information
>cd02175 GH16_lichenase lichenase, member of glycosyl hydrolase family 16 Back     alignment and domain information
>cd02178 GH16_beta_agarase Beta-agarase, member of glycosyl hydrolase family 16 Back     alignment and domain information
>PF00722 Glyco_hydro_16: Glycosyl hydrolases family 16; InterPro: IPR000757 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd08023 GH16_laminarinase_like Laminarinase, member of the glycosyl hydrolase family 16 Back     alignment and domain information
>cd00413 Glyco_hydrolase_16 glycosyl hydrolase family 16 Back     alignment and domain information
>PF06955 XET_C: Xyloglucan endo-transglycosylase (XET) C-terminus; InterPro: IPR010713 This entry represents the C terminus (approximately 60 residues) of plant xyloglucan endo-transglycosylase (XET) Back     alignment and domain information
>cd02182 GH16_Strep_laminarinase_like Streptomyces laminarinase-like, member of glycosyl hydrolase family 16 Back     alignment and domain information
>cd02180 GH16_fungal_KRE6_glucanase Saccharomyces cerevisiae KRE6 and related glucanses, member of glycosyl hydrolase family 16 Back     alignment and domain information
>cd02177 GH16_kappa_carrageenase Kappa-carrageenase, member of glycosyl hydrolase family 16 Back     alignment and domain information
>cd08024 GH16_CCF Coelomic cytolytic factor, member of glycosyl hydrolase family 16 Back     alignment and domain information
>cd02179 GH16_beta_GRP beta-1,3-glucan recognition protein, member of glycosyl hydrolase family 16 Back     alignment and domain information
>COG2273 SKN1 Beta-glucanase/Beta-glucan synthetase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF03935 SKN1: Beta-glucan synthesis-associated protein (SKN1); InterPro: IPR005629 This family consists of the beta-glucan synthesis-associated proteins KRE6 and SKN1 Back     alignment and domain information
>cd02181 GH16_fungal_Lam16A_glucanase fungal 1,3(4)-beta-D-glucanases, similar to Phanerochaete chrysosporium laminarinase 16A Back     alignment and domain information
>PF13385 Laminin_G_3: Concanavalin A-like lectin/glucanases superfamily; PDB: 4DQA_A 1N1Y_A 1MZ6_A 1MZ5_A 1N1S_A 2A75_A 1WCS_A 1N1T_A 1N1V_A 2FHR_A Back     alignment and domain information
>PF09264 Sial-lect-inser: Vibrio cholerae sialidase, lectin insertion; InterPro: IPR015344 This domain is predominantly found in Vibrio cholerae sialidase, and adopt a beta sandwich structure consisting of 12-14 strands arranged in two beta-sheets Back     alignment and domain information
>cd00152 PTX Pentraxins are plasma proteins characterized by their pentameric discoid assembly and their Ca2+ dependent ligand binding, such as Serum amyloid P component (SAP) and C-reactive Protein (CRP), which are cytokine-inducible acute-phase proteins implicated in innate immunity Back     alignment and domain information
>smart00560 LamGL LamG-like jellyroll fold domain Back     alignment and domain information
>smart00159 PTX Pentraxin / C-reactive protein / pentaxin family Back     alignment and domain information
>PF06439 DUF1080: Domain of Unknown Function (DUF1080); InterPro: IPR010496 This is a family of proteins of unknown function Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query193
1umz_A278 Xyloglucan Endotransglycosylase In Complex With The 4e-66
2vh9_A290 Crystal Structure Of Nxg1-Deltayniig In Complex Wit 5e-41
2uwb_A267 Crystal Structure Of The Nasturtium Seedling Mutant 5e-41
2uwc_A271 Crystal Structure Of Nasturtium Xyloglucan Hydrolas 3e-39
2uwa_A274 Crystal Structure Of The Nasturtium Seedling Xylogl 4e-39
3d6e_A201 Crystal Structure Of The Engineered 1,3-1,4-Beta-Gl 3e-09
1gbg_A214 Bacillus Licheniformis Beta-Glucanase Length = 214 2e-08
1axk_A 394 Engineered Bacillus Bifunctional Enzyme Gluxyn-1 Le 2e-08
1cpn_A208 Native-Like In Vivo Folding Of A Circularly Permute 2e-08
1mac_A212 Crystal Structure And Site-Directed Mutagenesis Of 2e-08
1cpm_A214 Native-Like In Vivo Folding Of A Circularly Permute 2e-08
1ajk_A214 Circularly Permuted (1-3,1-4)-Beta-D-Glucan 4- Gluc 2e-08
1byh_A214 Molecular And Active-Site Structure Of A Bacillus ( 2e-08
3o5s_A238 Crystal Structure Of The Endo-Beta-1,3-1,4 Glucanas 9e-08
1u0a_A214 Crystal Structure Of The Engineered Beta-1,3-1,4-En 1e-07
3i4i_A234 Crystal Structure Of A Prokaryotic Beta-1,3-1,4-Glu 5e-06
>pdb|1UMZ|A Chain A, Xyloglucan Endotransglycosylase In Complex With The Xyloglucan Nonasaccharide Xllg. Length = 278 Back     alignment and structure 
Iteration: 1

 Score =  246 bits (629), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 113/190 (59%), Positives = 136/190 (71%), Gaps = 3/190 (1%)
Query: 3   SNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNH 62
           S+  +  DE+DFEFLGNRTGQPY +QTN++  GKGDREQR+ LWFDP  ++H Y++LWN 
Sbjct: 83  SSQNSEHDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKEFHYYSVLWNM 142
Query: 63  HHIVFYVDDVPIRVYKNSGR--APFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFY 120
           + IVF VDDVPIRV+KN       FP NQPM +YS+LW ADDWATRGGLEK DWSKAPF 
Sbjct: 143 YMIVFLVDDVPIRVFKNCKDLGVKFPFNQPMKIYSSLWNADDWATRGGLEKTDWSKAPFI 202
Query: 121 AYYRDFDIEGCPVPGPAN-CASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDK 179
           A YR F I+GC     A  CA+    WW+   +Q L A + RR  WVR  + IY+YCTD+
Sbjct: 203 ASYRSFHIDGCEASVEAKFCATQGARWWDQKEFQDLDAFQYRRLSWVRQKYTIYNYCTDR 262
Query: 180 SRYPVPPPEC 189
           SRYP  PPEC
Sbjct: 263 SRYPSMPPEC 272
>pdb|2VH9|A Chain A, Crystal Structure Of Nxg1-Deltayniig In Complex With Xllg, A Xyloglucan Derived Oligosaccharide Length = 290 Back     alignment and structure
>pdb|2UWB|A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig Length = 267 Back     alignment and structure
>pdb|2UWC|A Chain A, Crystal Structure Of Nasturtium Xyloglucan Hydrolase Isoform Nxg2 Length = 271 Back     alignment and structure
>pdb|2UWA|A Chain A, Crystal Structure Of The Nasturtium Seedling Xyloglucanase Isoform Nxg1 Length = 274 Back     alignment and structure
>pdb|3D6E|A Chain A, Crystal Structure Of The Engineered 1,3-1,4-Beta-Glucanase Protein From Bacillus Licheniformis Length = 201 Back     alignment and structure
>pdb|1GBG|A Chain A, Bacillus Licheniformis Beta-Glucanase Length = 214 Back     alignment and structure
>pdb|1AXK|A Chain A, Engineered Bacillus Bifunctional Enzyme Gluxyn-1 Length = 394 Back     alignment and structure
>pdb|1CPN|A Chain A, Native-Like In Vivo Folding Of A Circularly Permuted Jellyroll Protein Shown By Crystal Structure Analysis Length = 208 Back     alignment and structure
>pdb|1MAC|A Chain A, Crystal Structure And Site-Directed Mutagenesis Of Bacillus Macerans Endo-1,3-1,4-Beta-Glucanase Length = 212 Back     alignment and structure
>pdb|1CPM|A Chain A, Native-Like In Vivo Folding Of A Circularly Permuted Jellyroll Protein Shown By Crystal Structure Analysis Length = 214 Back     alignment and structure
>pdb|1AJK|A Chain A, Circularly Permuted (1-3,1-4)-Beta-D-Glucan 4- Glucanohydrolase Cpa16m-84 Length = 214 Back     alignment and structure
>pdb|1BYH|A Chain A, Molecular And Active-Site Structure Of A Bacillus (1-3,1-4)- Beta-Glucanase Length = 214 Back     alignment and structure
>pdb|3O5S|A Chain A, Crystal Structure Of The Endo-Beta-1,3-1,4 Glucanase From Bacillus Subtilis (Strain 168) Length = 238 Back     alignment and structure
>pdb|1U0A|A Chain A, Crystal Structure Of The Engineered Beta-1,3-1,4-Endoglucanase H(A16- M) In Complex With Beta-Glucan Tetrasaccharide Length = 214 Back     alignment and structure
>pdb|3I4I|A Chain A, Crystal Structure Of A Prokaryotic Beta-1,3-1,4-Glucanase (Lichenase) Derived From A Mouse Hindgut Metagenome Length = 234 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query193
1umz_A278 Xyloglucan endotransglycosylase; glycoside hydrola 3e-81
2uwa_A274 Cellulase; glycoside hydrolase, xyloglucan-endo-tr 1e-72
1cpn_A208 Circularly permuted; hydrolase(glucanase); 1.80A { 1e-46
3o5s_A238 Beta-glucanase; glycosyl hydrolase, beta-jelly rol 3e-43
1ajk_A214 CPA16M-84, circularly permuted (1-3,1-4)-beta-D-gl 6e-42
2ayh_A214 1,3-1,4-beta-D-glucan 4-glucanohydrolase; hydrolas 3e-39
1axk_A 394 Gluxyn-1; bifunctional, fusion protein, 1,4-beta-x 2e-37
3i4i_A234 1,3-1,4-beta-glucanase; beta-sandwich, hydrolase; 4e-37
3h0o_A240 Beta-glucanase; 1,3-1,4-beta-D-glucanase, CH-PI st 1e-34
1ajo_A214 CPA16M-127, circularly permuted (1-3,1-4)-beta-D-g 6e-19
1ajo_A214 CPA16M-127, circularly permuted (1-3,1-4)-beta-D-g 2e-04
2hyk_A245 Beta-1,3-glucanase; family 16, beta-jelly roll, ba 8e-07
3azy_A272 Laminarinase; beta-jelly roll fold, glycosyl hydro 2e-06
3iln_A251 Laminarinase; jelly ROW, hydrolase, family 16 glyc 4e-06
1ups_A420 Glcnac-alpha-1,4-GAL-releasing endo-beta- galactos 4e-06
2vy0_A264 Endo-beta-1,3-glucanase; hydrolase, laminarin, end 9e-06
1dyp_A271 Kappa-carrageenase; hydrolase, kappa-carrageenan d 4e-05
3juu_A280 Porphyranase B; glycoside hydrolase family GH16, b 7e-05
4awd_A324 Beta-porphyranase; hydrolase; 2.40A {Bacteroides p 7e-05
4ate_A266 Beta-porphyranase A; hydrolase, AGAR degradation; 2e-04
>1umz_A Xyloglucan endotransglycosylase; glycoside hydrolase, XET, XTH, XEH, transglycosylation, transferase, glycosyltransferase; HET: NAG BMA BGC GAL; 1.8A {Populus tremula} SCOP: b.29.1.2 PDB: 1un1_A* Length = 278 Back     alignment and structure
 Score =  241 bits (617), Expect = 3e-81
 Identities = 113/190 (59%), Positives = 136/190 (71%), Gaps = 3/190 (1%)

Query: 3   SNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNH 62
           S+  +  DE+DFEFLGNRTGQPY +QTN++  GKGDREQR+ LWFDP  ++H Y++LWN 
Sbjct: 83  SSQNSEHDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKEFHYYSVLWNM 142

Query: 63  HHIVFYVDDVPIRVYKNSGRA--PFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFY 120
           + IVF VDDVPIRV+KN       FP NQPM +YS+LW ADDWATRGGLEK DWSKAPF 
Sbjct: 143 YMIVFLVDDVPIRVFKNCKDLGVKFPFNQPMKIYSSLWNADDWATRGGLEKTDWSKAPFI 202

Query: 121 AYYRDFDIEGCPVPGPAN-CASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDK 179
           A YR F I+GC     A  CA+    WW+   +Q L A + RR  WVR  + IY+YCTD+
Sbjct: 203 ASYRSFHIDGCEASVEAKFCATQGARWWDQKEFQDLDAFQYRRLSWVRQKYTIYNYCTDR 262

Query: 180 SRYPVPPPEC 189
           SRYP  PPEC
Sbjct: 263 SRYPSMPPEC 272
>2uwa_A Cellulase; glycoside hydrolase, xyloglucan-endo-transferase, hydrolase, glycosidase, family GH16, tropaeolum majus xyloglucanase; 1.8A {Tropaeolum majus} PDB: 2uwc_A 2uwb_A 2vh9_A* Length = 274 Back     alignment and structure
>1cpn_A Circularly permuted; hydrolase(glucanase); 1.80A {Paenibacillus macerans} SCOP: b.29.1.2 PDB: 1cpm_A Length = 208 Back     alignment and structure
>3o5s_A Beta-glucanase; glycosyl hydrolase, beta-jelly roll, hydrolase; HET: B3P; 2.20A {Bacillus subtilis} PDB: 3d6e_A Length = 238 Back     alignment and structure
>1ajk_A CPA16M-84, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase; glucanase, circular permutation; HET: EPE; 1.80A {Paenibacillus macerans} SCOP: b.29.1.2 Length = 214 Back     alignment and structure
>2ayh_A 1,3-1,4-beta-D-glucan 4-glucanohydrolase; hydrolase (glucanase); 1.60A {Hybrid} SCOP: b.29.1.2 PDB: 1byh_A 1glh_A 1u0a_A* 1mac_A 1gbg_A Length = 214 Back     alignment and structure
>1axk_A Gluxyn-1; bifunctional, fusion protein, 1,4-beta-xylanase, 1,3-1,4-beta-glucanase, hybrid enzyme; 2.10A {Bacillus subtilis} SCOP: b.29.1.2 b.29.1.11 Length = 394 Back     alignment and structure
>3i4i_A 1,3-1,4-beta-glucanase; beta-sandwich, hydrolase; 1.89A {Uncultured murine large bowel bacteriuorganism_taxid} Length = 234 Back     alignment and structure
>3h0o_A Beta-glucanase; 1,3-1,4-beta-D-glucanase, CH-PI stacking interactions, TRIS inhibition, hydrolase, glycosidase; 1.40A {Fibrobacter succinogenes} PDB: 1mve_A 1zm1_A* 2r4a_A 3hr9_A 2r49_A 3axd_A 3axe_A* Length = 240 Back     alignment and structure
>1ajo_A CPA16M-127, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase CPA16M-127; glucanase, circular permutation; 2.07A {Paenibacillus macerans} SCOP: b.29.1.2 Length = 214 Back     alignment and structure
>1ajo_A CPA16M-127, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase CPA16M-127; glucanase, circular permutation; 2.07A {Paenibacillus macerans} SCOP: b.29.1.2 Length = 214 Back     alignment and structure
>2hyk_A Beta-1,3-glucanase; family 16, beta-jelly roll, bacterial endo-beta-1,3-glucanas hydrolase; 1.30A {Nocardiopsis SP} PDB: 3atg_A Length = 245 Back     alignment and structure
>3azy_A Laminarinase; beta-jelly roll fold, glycosyl hydrolase family 16, laminari endo-1,3-beta-glucanase, hydrolase; 1.65A {Thermotoga maritima} PDB: 3azx_A 3azz_A* 3b00_A* 3b01_A 4dfs_A Length = 272 Back     alignment and structure
>3iln_A Laminarinase; jelly ROW, hydrolase, family 16 glycosyl hydrolase; 1.95A {Rhodothermus marinus} Length = 251 Back     alignment and structure
>1ups_A Glcnac-alpha-1,4-GAL-releasing endo-beta- galactosidase; endo-galactosidase, glycosyl hydrolase, PSI, protein structure initiative; 1.82A {Clostridium perfringens} SCOP: b.29.1.2 b.42.2.3 Length = 420 Back     alignment and structure
>2vy0_A Endo-beta-1,3-glucanase; hydrolase, laminarin, endoglucanase, thermostable protein,; 2.16A {Pyrococcus furiosus} Length = 264 Back     alignment and structure
>1dyp_A Kappa-carrageenase; hydrolase, kappa-carrageenan double helix degradation; HET: MSE; 1.54A {Pseudoalteromonas carrageenovora} SCOP: b.29.1.2 Length = 271 Back     alignment and structure
>3juu_A Porphyranase B; glycoside hydrolase family GH16, beta-sandwich fold, jelly roll, sugar binding protein, hydrolase-carbohydrate complex; HET: MES GOL; 1.80A {Zobellia galactanivorans} Length = 280 Back     alignment and structure
>4awd_A Beta-porphyranase; hydrolase; 2.40A {Bacteroides plebeius} Length = 324 Back     alignment and structure
>4ate_A Beta-porphyranase A; hydrolase, AGAR degradation; 1.10A {Zobellia galactanivorans} PDB: 3ilf_A* Length = 266 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query193
1umz_A278 Xyloglucan endotransglycosylase; glycoside hydrola 100.0
2uwa_A274 Cellulase; glycoside hydrolase, xyloglucan-endo-tr 100.0
1ajk_A214 CPA16M-84, circularly permuted (1-3,1-4)-beta-D-gl 99.97
3i4i_A234 1,3-1,4-beta-glucanase; beta-sandwich, hydrolase; 99.97
3o5s_A238 Beta-glucanase; glycosyl hydrolase, beta-jelly rol 99.97
1cpn_A208 Circularly permuted; hydrolase(glucanase); 1.80A { 99.96
2ayh_A214 1,3-1,4-beta-D-glucan 4-glucanohydrolase; hydrolas 99.96
3iln_A251 Laminarinase; jelly ROW, hydrolase, family 16 glyc 99.95
3h0o_A240 Beta-glucanase; 1,3-1,4-beta-D-glucanase, CH-PI st 99.95
1axk_A 394 Gluxyn-1; bifunctional, fusion protein, 1,4-beta-x 99.94
2hyk_A245 Beta-1,3-glucanase; family 16, beta-jelly roll, ba 99.94
4ate_A266 Beta-porphyranase A; hydrolase, AGAR degradation; 99.93
3azy_A272 Laminarinase; beta-jelly roll fold, glycosyl hydro 99.92
2vy0_A264 Endo-beta-1,3-glucanase; hydrolase, laminarin, end 99.92
3juu_A280 Porphyranase B; glycoside hydrolase family GH16, b 99.92
4awd_A324 Beta-porphyranase; hydrolase; 2.40A {Bacteroides p 99.92
1o4y_A288 Beta-agarase A; glycoside hydrolase family 16, aga 99.91
3rq0_A269 Glycosyl hydrolases family protein 16; structural 99.91
1dyp_A271 Kappa-carrageenase; hydrolase, kappa-carrageenan d 99.9
3dgt_A280 Endo-1,3-beta-glucanase; GHF16, hydrolase, 1; 1.50 99.9
4atf_A308 Beta-agarase B; hydrolase, polysaccharidase, agaro 99.89
1o4z_A346 Beta-agarase B; glycoside hydrolase family 16, aga 99.89
1ajo_A214 CPA16M-127, circularly permuted (1-3,1-4)-beta-D-g 99.86
1ups_A420 Glcnac-alpha-1,4-GAL-releasing endo-beta- galactos 99.86
4asm_B363 Beta-agarase D; hydrolase, glycoside hydrolase, en 99.68
2w39_A298 Putative laminarinase; hydrolase, white ROT fungus 99.59
3flp_A217 SAP-like pentraxin; physiological doubly-stacked h 92.55
4dqa_A355 Uncharacterized protein; two domains structure, DU 89.86
3pvn_A206 C-reactive protein; pentraxin family, immune syste 89.38
3kqr_A204 Serum amyloid P-component; glycoprotein, disulfide 86.4
2v73_A191 CBM40, putative EXO-alpha-sialidase; carbohydrate- 82.77
>1umz_A Xyloglucan endotransglycosylase; glycoside hydrolase, XET, XTH, XEH, transglycosylation, transferase, glycosyltransferase; HET: NAG BMA BGC GAL; 1.8A {Populus tremula} SCOP: b.29.1.2 PDB: 1un1_A* Back     alignment and structure
Probab=100.00  E-value=2.3e-63  Score=429.81  Aligned_cols=189  Identities=59%  Similarity=1.186  Sum_probs=174.2

Q ss_pred             CCCCCCCCeEeEEEcCCCCCCCcEEEEeEeeCCCCCcceeEecCCCCCCCcEEEEEEEcCCceEEEECCEEEEEEeCCCC
Q 029460            3 SNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGR   82 (193)
Q Consensus         3 s~~~~~~~EIDiE~lG~~~g~p~~v~tn~~~~g~g~r~~~~~l~fd~t~dFH~Y~i~W~p~~I~fyVDg~~vr~~~~~~~   82 (193)
                      +.++. +||||||+||+.+++++++|||+|.+|.+++++++.+++|++++||+|+|+|+|++|+|||||++||++++.+.
T Consensus        84 ~~~p~-~gEIDmE~lG~~~g~~~tvhtn~~~~g~~~~~~~~~l~~d~~~dFHtY~i~Wtp~~I~fyVDG~~v~t~~~~~~  162 (278)
T 1umz_A           84 SQNSE-HDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKEFHYYSVLWNMYMIVFLVDDVPIRVFKNCKD  162 (278)
T ss_dssp             CSSSS-CCEEEEEEECCSTTSCCEEEEEEEBTTBCCCCEEECCSSCTTTSCEEEEEEECSSEEEEEETTEEEEEEECCGG
T ss_pred             cCCCC-CCeEEEEEeCCCCCCceEEEEEEecCCCCCCcceEecCCCCccCcEEEEEEEecCeEEEEECCeEEEEEecCcC
Confidence            44456 99999999999998999999999999999999999999999999999999999999999999999999987653


Q ss_pred             --CCCCCCCceEEEEEeeeCCCcccCCCccccCCCCCCEEEEEeEEEEeeecCC-CCCccCCCCCCcccccCcccCCHHH
Q 029460           83 --APFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVP-GPANCASNPGNWWEANNYQALTAME  159 (193)
Q Consensus        83 --~~~P~~~Pm~l~lnlw~gg~Wat~GG~~~id~~~aPf~a~~~~~~v~~c~~~-~~~~C~~~~~~w~~~~~~~~l~~~~  159 (193)
                        .+||+++||+|+||||+||+||++||.+++||.++||++.|+.+++.||..+ +.+.|.+.+..||+++.+++|++.|
T Consensus       163 ~g~~~Pf~~P~~lilnlw~GG~Wa~~gG~~~~d~~~~p~v~~vr~~~~~~c~~~~~~~~c~~~~~~~~~~~~~~~l~~~~  242 (278)
T 1umz_A          163 LGVKFPFNQPMKIYSSLWNADDWATRGGLEKTDWSKAPFIASYRSFHIDGCEASVEAKFCATQGARWWDQKEFQDLDAFQ  242 (278)
T ss_dssp             GTCCCSCSSCBEEEEEEEECTTTSSGGGTSCCCGGGCCEEEEEEEEEEEEEECCSSSCCCTTTTCSGGGSGGGSSCCHHH
T ss_pred             cCccCcCCCceEEEEEEEECCcccCCCCccccCCCCCCEEEEEEEEEEecccCCCCCCccCCCcccccccCccccCCHHH
Confidence              6799889999999999999999999988899999999999999999999864 3456987667899998899999999


Q ss_pred             HHHHHHHhhcCeeeecCCCCCCCCCCCCCccCC
Q 029460          160 ARRYRWVRLNHMIYDYCTDKSRYPVPPPECLAG  192 (193)
Q Consensus       160 ~~~~~~v~~~~m~YdYC~D~~R~~~~p~EC~~~  192 (193)
                      +++|+|||+||||||||+|++|||++||||.++
T Consensus       243 ~~~~~~~~~~~~~y~yc~d~~r~~~~~~ec~~~  275 (278)
T 1umz_A          243 YRRLSWVRQKYTIYNYCTDRSRYPSMPPECKRD  275 (278)
T ss_dssp             HHHHHHHHHHTEEEEGGGCTTTCSSCCTHHHHH
T ss_pred             HHHHHHHHHCCeEEecCCCCCcCCCCCcccCCC
Confidence            999999999999999999999999999999743
>2uwa_A Cellulase; glycoside hydrolase, xyloglucan-endo-transferase, hydrolase, glycosidase, family GH16, tropaeolum majus xyloglucanase; 1.8A {Tropaeolum majus} PDB: 2uwc_A 2uwb_A 2vh9_A* Back     alignment and structure
>1ajk_A CPA16M-84, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase; glucanase, circular permutation; HET: EPE; 1.80A {Paenibacillus macerans} SCOP: b.29.1.2 Back     alignment and structure
>3i4i_A 1,3-1,4-beta-glucanase; beta-sandwich, hydrolase; 1.89A {Uncultured murine large bowel bacteriuorganism_taxid} Back     alignment and structure
>3o5s_A Beta-glucanase; glycosyl hydrolase, beta-jelly roll, hydrolase; HET: B3P; 2.20A {Bacillus subtilis} PDB: 3d6e_A Back     alignment and structure
>1cpn_A Circularly permuted; hydrolase(glucanase); 1.80A {Paenibacillus macerans} SCOP: b.29.1.2 PDB: 1cpm_A Back     alignment and structure
>2ayh_A 1,3-1,4-beta-D-glucan 4-glucanohydrolase; hydrolase (glucanase); 1.60A {Hybrid} SCOP: b.29.1.2 PDB: 1byh_A 1glh_A 1u0a_A* 1mac_A 1gbg_A Back     alignment and structure
>3iln_A Laminarinase; jelly ROW, hydrolase, family 16 glycosyl hydrolase; 1.95A {Rhodothermus marinus} Back     alignment and structure
>3h0o_A Beta-glucanase; 1,3-1,4-beta-D-glucanase, CH-PI stacking interactions, TRIS inhibition, hydrolase, glycosidase; 1.40A {Fibrobacter succinogenes} SCOP: b.29.1.2 PDB: 1mve_A 1zm1_A* 2r4a_A 3hr9_A 2r49_A 3axd_A 3axe_A* Back     alignment and structure
>1axk_A Gluxyn-1; bifunctional, fusion protein, 1,4-beta-xylanase, 1,3-1,4-beta-glucanase, hybrid enzyme; 2.10A {Bacillus subtilis} SCOP: b.29.1.2 b.29.1.11 Back     alignment and structure
>2hyk_A Beta-1,3-glucanase; family 16, beta-jelly roll, bacterial endo-beta-1,3-glucanas hydrolase; 1.30A {Nocardiopsis SP} PDB: 3atg_A Back     alignment and structure
>4ate_A Beta-porphyranase A; hydrolase, AGAR degradation; 1.10A {Zobellia galactanivorans} PDB: 3ilf_A* Back     alignment and structure
>3azy_A Laminarinase; beta-jelly roll fold, glycosyl hydrolase family 16, laminari endo-1,3-beta-glucanase, hydrolase; 1.65A {Thermotoga maritima} PDB: 3azx_A 3azz_A* 3b00_A* 3b01_A 4dfs_A Back     alignment and structure
>2vy0_A Endo-beta-1,3-glucanase; hydrolase, laminarin, endoglucanase, thermostable protein,; 2.16A {Pyrococcus furiosus} Back     alignment and structure
>3juu_A Porphyranase B; glycoside hydrolase family GH16, beta-sandwich fold, jelly roll, sugar binding protein, hydrolase-carbohydrate complex; HET: MES GOL; 1.80A {Zobellia galactanivorans} Back     alignment and structure
>4awd_A Beta-porphyranase; hydrolase; 2.40A {Bacteroides plebeius} Back     alignment and structure
>1o4y_A Beta-agarase A; glycoside hydrolase family 16, agarose degradation, cleavage of beta-1, 4-D-galactose linkages; HET: SO4; 1.48A {Zobellia galactanivorans} SCOP: b.29.1.2 PDB: 1urx_A* Back     alignment and structure
>3rq0_A Glycosyl hydrolases family protein 16; structural genomics, PSI-biology; HET: PG4 211; 2.02A {Mycobacterium smegmatis} Back     alignment and structure
>1dyp_A Kappa-carrageenase; hydrolase, kappa-carrageenan double helix degradation; HET: MSE; 1.54A {Pseudoalteromonas carrageenovora} SCOP: b.29.1.2 Back     alignment and structure
>3dgt_A Endo-1,3-beta-glucanase; GHF16, hydrolase, 1; 1.50A {Streptomyces sioyaensis} Back     alignment and structure
>4atf_A Beta-agarase B; hydrolase, polysaccharidase, agarolytic enzyme; HET: AAL GAL; 1.90A {Zobellia galactanivorans} Back     alignment and structure
>1o4z_A Beta-agarase B; glycoside hydrolase family 16, agarose degradation, cleavage of beta-1, 4-D-galactose linkages; HET: EPE; 2.30A {Zobellia galactanivorans} SCOP: b.29.1.2 Back     alignment and structure
>1ajo_A CPA16M-127, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase CPA16M-127; glucanase, circular permutation; 2.07A {Paenibacillus macerans} SCOP: b.29.1.2 Back     alignment and structure
>1ups_A Glcnac-alpha-1,4-GAL-releasing endo-beta- galactosidase; endo-galactosidase, glycosyl hydrolase, PSI, protein structure initiative; 1.82A {Clostridium perfringens} SCOP: b.29.1.2 b.42.2.3 Back     alignment and structure
>4asm_B Beta-agarase D; hydrolase, glycoside hydrolase, endo-beta-agarase; 1.50A {Zobellia galactanivorans} Back     alignment and structure
>2w39_A Putative laminarinase; hydrolase, white ROT fungus, glycosyl hydrolase, GH7, GH16, LAM16A, family 16, beta-glucan, basidiomycete; HET: NAG BGC LGC; 1.10A {Phanerochaete chrysosporium} PDB: 2cl2_A* 2w52_A* 2wlq_A* 2wne_A* Back     alignment and structure
>3flp_A SAP-like pentraxin; physiological doubly-stacked heptamer, pentraxin fold, cyclic heptamer, invertebrate lectin, sugar binding protein; 2.30A {Limulus polyphemus} PDB: 3flr_A 3flt_A Back     alignment and structure
>4dqa_A Uncharacterized protein; two domains structure, DUF 1735, laminin_G_3 concanavalin A- lectin/glucanases superfamily domain; HET: MSE; 1.50A {Bacteroides ovatus} Back     alignment and structure
>3pvn_A C-reactive protein; pentraxin family, immune system; 1.98A {Homo sapiens} SCOP: b.29.1.5 PDB: 1gnh_A 1lj7_A 3l2y_A 1b09_A 3pvo_A Back     alignment and structure
>3kqr_A Serum amyloid P-component; glycoprotein, disulfide bond, lectin, metal-binding secreted; HET: NAG; 1.50A {Homo sapiens} SCOP: b.29.1.5 PDB: 1lgn_A* 1gyk_A 2a3w_A* 2a3x_A* 2a3y_A* 1sac_A* 3d5o_A* 2w08_A* Back     alignment and structure
>2v73_A CBM40, putative EXO-alpha-sialidase; carbohydrate-binding module, bacterial pathogen, sialic acid, sugar-binding protein; HET: SIA; 2.2A {Clostridium perfringens} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 193
d1umza_267 b.29.1.2 (A:) Xyloglucan endotransglycosylase {Eur 1e-73
d1ajka_214 b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {Bac 3e-35
d1mvea_243 b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {Fib 1e-13
d2ayha_214 b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {syn 4e-10
d1dypa_271 b.29.1.2 (A:) kappa-Carrageenase, catalytic {Pseud 2e-04
>d1umza_ b.29.1.2 (A:) Xyloglucan endotransglycosylase {European aspen (Populus tremula) [TaxId: 113636]} Length = 267 Back     information, alignment and structure

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Glycosyl hydrolases family 16
domain: Xyloglucan endotransglycosylase
species: European aspen (Populus tremula) [TaxId: 113636]

 Score =  221 bits (563), Expect = 1e-73
 Identities = 112/183 (61%), Positives = 133/183 (72%), Gaps = 3/183 (1%)

Query: 10  DELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYV 69
           DE+DFEFLGNRTGQPY +QTN++  GKGDREQR+ LWFDP  ++H Y++LWN + IVF V
Sbjct: 79  DEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKEFHYYSVLWNMYMIVFLV 138

Query: 70  DDVPIRVYKN--SGRAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFD 127
           DDVPIRV+KN       FP NQPM +YS+LW ADDWATRGGLEK DWSKAPF A YR F 
Sbjct: 139 DDVPIRVFKNCKDLGVKFPFNQPMKIYSSLWNADDWATRGGLEKTDWSKAPFIASYRSFH 198

Query: 128 IEGCPVPGPAN-CASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPP 186
           I+GC     A  CA+    WW+   +Q L A + RR  WVR  + IY+YCTD+SRYP  P
Sbjct: 199 IDGCEASVEAKFCATQGARWWDQKEFQDLDAFQYRRLSWVRQKYTIYNYCTDRSRYPSMP 258

Query: 187 PEC 189
           PEC
Sbjct: 259 PEC 261
>d1ajka_ b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {Bacillus macerans [TaxId: 44252]} Length = 214 Back     information, alignment and structure
>d1mvea_ b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {Fibrobacter succinogenes [TaxId: 833]} Length = 243 Back     information, alignment and structure
>d2ayha_ b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {synthetic, hybrid between Bacillus amyloliquefaciens and Bacillus macerans proteins} Length = 214 Back     information, alignment and structure
>d1dypa_ b.29.1.2 (A:) kappa-Carrageenase, catalytic {Pseudoalteromonas carrageenovora [TaxId: 227]} Length = 271 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query193
d1umza_267 Xyloglucan endotransglycosylase {European aspen (P 100.0
d1ajka_214 Bacillus 1-3,1-4-beta-glucanase {Bacillus macerans 100.0
d1mvea_243 Bacillus 1-3,1-4-beta-glucanase {Fibrobacter succi 99.91
d2ayha_214 Bacillus 1-3,1-4-beta-glucanase {synthetic, hybrid 99.89
d1upsa1266 GlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosi 99.85
d1o4ya_270 beta-Agarase A {Zobellia galactanivorans [TaxId: 6 99.84
d1o4za_295 beta-Agarase A {Zobellia galactanivorans [TaxId: 6 99.79
d1dypa_271 kappa-Carrageenase, catalytic {Pseudoalteromonas c 99.77
d1epwa1218 Botulinum neurotoxin {Clostridium botulinum, serot 95.25
d1saca_204 Serum amyloid P component (SAP) {Human (Homo sapie 93.87
d1a8da1247 Tetanus neurotoxin {Clostridium tetani [TaxId: 151 93.75
d2slia1196 Leech intramolecular trans-sialidase, N-terminal d 93.29
d1b09a_206 C-reactive protein (CRP) {Human (Homo sapiens) [Ta 93.23
d1oq1a_223 Hypothetical protein YesU {Bacillus subtilis [TaxI 93.18
d3btaa1207 Botulinum neurotoxin {Clostridium botulinum, serot 90.12
d1w0pa1192 Vibrio cholerae sialidase, N-terminal and insertio 89.04
d1w0pa2197 Vibrio cholerae sialidase, N-terminal and insertio 88.56
d2erfa1206 Thrombospondin 1 N-terminal domain {Human (Homo sa 83.33
>d1umza_ b.29.1.2 (A:) Xyloglucan endotransglycosylase {European aspen (Populus tremula) [TaxId: 113636]} Back     information, alignment and structure
class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Glycosyl hydrolases family 16
domain: Xyloglucan endotransglycosylase
species: European aspen (Populus tremula) [TaxId: 113636]

Probab=100.00  E-value=1.3e-66  Score=445.79  Aligned_cols=190  Identities=59%  Similarity=1.182  Sum_probs=177.3

Q ss_pred             CCCCCCCCCeEeEEEcCCCCCCCcEEEEeEeeCCCCCcceeEecCCCCCCCcEEEEEEEcCCceEEEECCEEEEEEeCCC
Q 029460            2 NSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSG   81 (193)
Q Consensus         2 ~s~~~~~~~EIDiE~lG~~~g~p~~v~tn~~~~g~g~r~~~~~l~fd~t~dFH~Y~i~W~p~~I~fyVDg~~vr~~~~~~   81 (193)
                      +|+++. ++|||||+||+.+++++++|||+|.+|.+++++++.++|||+++||+|+|+|+|++|+|||||++||++++.+
T Consensus        72 ~s~~~~-~dEIDiE~lG~~~~~~~~v~tn~~~~g~g~~~~~~~~~~d~s~dFHtY~i~Wtp~~I~fyVDG~~vr~~~n~~  150 (267)
T d1umza_          72 SSQNSE-HDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKEFHYYSVLWNMYMIVFLVDDVPIRVFKNCK  150 (267)
T ss_dssp             ECSSSS-CCEEEEEEECCSTTSCCEEEEEEEBTTBCCCCEEECCSSCTTTSCEEEEEEECSSEEEEEETTEEEEEEECCG
T ss_pred             cCCCCC-CCeEEEEEecccCCcccEEEeeEeCCCCCCcceeEecCCCCccCcEEEEEEECcceEEEEECCEEEEEEeccc
Confidence            455667 9999999999999999999999999999999999999999999999999999999999999999999999876


Q ss_pred             C--CCCCCCCceEEEEEeeeCCCcccCCCccccCCCCCCEEEEEeEEEEeeecCC-CCCccCCCCCCcccccCcccCCHH
Q 029460           82 R--APFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVP-GPANCASNPGNWWEANNYQALTAM  158 (193)
Q Consensus        82 ~--~~~P~~~Pm~l~lnlw~gg~Wat~GG~~~id~~~aPf~a~~~~~~v~~c~~~-~~~~C~~~~~~w~~~~~~~~l~~~  158 (193)
                      .  .+||+++||+|++|||+||+|||+||+.++||+.+||+|.|++|+|+||.+. ..+.|...+..||++..+++|+..
T Consensus       151 ~~g~~~p~~~pm~i~~niW~g~~Wat~gG~~~~d~~~aPf~a~~~~~~v~~c~~~~~~~~~~~~~~~~~~~~~~~~l~~~  230 (267)
T d1umza_         151 DLGVKFPFNQPMKIYSSLWNADDWATRGGLEKTDWSKAPFIASYRSFHIDGCEASVEAKFCATQGARWWDQKEFQDLDAF  230 (267)
T ss_dssp             GGTCCCSCSSCBEEEEEEEECTTTSSGGGTSCCCGGGCCEEEEEEEEEEEEEECCSSSCCCTTTTCSGGGSGGGSSCCHH
T ss_pred             cCCCCCCcceEEEEEEeeeeCCCccccCCeeeecCCCCCEEEEEEEEEEEecccCCCCcccCCCCCccccccccccCCHH
Confidence            6  7788889999999999999999999999999999999999999999999864 445676667789999999999999


Q ss_pred             HHHHHHHHhhcCeeeecCCCCCCCCCCCCCccCC
Q 029460          159 EARRYRWVRLNHMIYDYCTDKSRYPVPPPECLAG  192 (193)
Q Consensus       159 ~~~~~~~v~~~~m~YdYC~D~~R~~~~p~EC~~~  192 (193)
                      |+++|+|||+||||||||+|++|||.+||||..|
T Consensus       231 ~~~~~~~~~~~~~~y~yC~d~~r~~~~p~EC~~~  264 (267)
T d1umza_         231 QYRRLSWVRQKYTIYNYCTDRSRYPSMPPECKRD  264 (267)
T ss_dssp             HHHHHHHHHHHTEEEEGGGCTTTCSSCCTHHHHH
T ss_pred             HHHHHHHHHHCCcEEccCCCCCcCCCCCcccCCC
Confidence            9999999999999999999999999999999753
>d1ajka_ b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {Bacillus macerans [TaxId: 44252]} Back     information, alignment and structure
>d1mvea_ b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {Fibrobacter succinogenes [TaxId: 833]} Back     information, alignment and structure
>d2ayha_ b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {synthetic, hybrid between Bacillus amyloliquefaciens and Bacillus macerans proteins} Back     information, alignment and structure
>d1upsa1 b.29.1.2 (A:19-284) GlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosidase, GngC, catalytic domain {Clostridium perfringens [TaxId: 1502]} Back     information, alignment and structure
>d1o4ya_ b.29.1.2 (A:) beta-Agarase A {Zobellia galactanivorans [TaxId: 63186]} Back     information, alignment and structure
>d1o4za_ b.29.1.2 (A:) beta-Agarase A {Zobellia galactanivorans [TaxId: 63186]} Back     information, alignment and structure
>d1dypa_ b.29.1.2 (A:) kappa-Carrageenase, catalytic {Pseudoalteromonas carrageenovora [TaxId: 227]} Back     information, alignment and structure
>d1epwa1 b.29.1.6 (A:862-1079) Botulinum neurotoxin {Clostridium botulinum, serotype B [TaxId: 1491]} Back     information, alignment and structure
>d1saca_ b.29.1.5 (A:) Serum amyloid P component (SAP) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1a8da1 b.29.1.6 (A:1-247) Tetanus neurotoxin {Clostridium tetani [TaxId: 1513]} Back     information, alignment and structure
>d2slia1 b.29.1.9 (A:81-276) Leech intramolecular trans-sialidase, N-terminal domain {North american leech (Macrobdella decora) [TaxId: 6405]} Back     information, alignment and structure
>d1b09a_ b.29.1.5 (A:) C-reactive protein (CRP) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1oq1a_ b.29.1.17 (A:) Hypothetical protein YesU {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d3btaa1 b.29.1.6 (A:872-1078) Botulinum neurotoxin {Clostridium botulinum, serotype A [TaxId: 1491]} Back     information, alignment and structure
>d1w0pa1 b.29.1.8 (A:25-216) Vibrio cholerae sialidase, N-terminal and insertion domains {Vibrio cholerae [TaxId: 666]} Back     information, alignment and structure
>d1w0pa2 b.29.1.8 (A:347-543) Vibrio cholerae sialidase, N-terminal and insertion domains {Vibrio cholerae [TaxId: 666]} Back     information, alignment and structure
>d2erfa1 b.29.1.4 (A:10-215) Thrombospondin 1 N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure