Citrus Sinensis ID: 029473


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190---
MVIVFIYMLFAVPLLALGGRIGYWFRSEFQAPSALNRYPREILPLPWYQKSPCQMFIVGLLSFSIIALELHHLYASLWGYKIFTLPGILFVMFIILLVLTAILSIGLTYIQLSVEDHEWWWRSVFRGGSTAIFMFAYSIYFYFRSNMSGFLQLSFFLGYNVAMCYAFFLILGSVSFRASMIFVRRIYRVVKSE
cEEEEHHHHcccccHHHHHHHHccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEEcccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccc
cEEEEEEEEEEccEEEEHHHHccccccccccccccccccccccccccccccHHHHHHHcHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc
MVIVFIYMLFAVPLLAlggrigywfrsefqapsalnrypreilplpwyqkspcqmFIVGLLSFSIIALELHHLYASLWgykiftlpGILFVMFIILLVLTAILSIGLTYIQLSVEDHEWWWRSVFRGGSTAIFMFAYSIYFYFRSNMSGFLQLSFFLGYNVAMCYAFFLILGSVSFRASMIFVRRIYRVVKSE
MVIVFIYMLFAVPLLALGGRIGYWFRSEFQAPSALNRYPREILPLPWYQKSPCQMFIVGLLSFSIIALELHHLYASLWGYKIFTLPGILFVMFIILLVLTAILSIGLTYIQLSVEDHEWWWRSVFRGGSTAIFMFAYSIYFYFRSNMSGFLQLSFFLGYNVAMCYAFFLILGSVSFRASMIFVRRIYRVVKSE
MVIVFIYMLFAVPLLALGGRIGYWFRSEFQAPSALNRYPREILPLPWYQKSPCQMFIVGLLSFSIIALELHHLYASLWGYKIFTLPGilfvmfiillvlTAILSIGLTYIQLSVEDHEWWWRSVFRGGSTAIFMFAYSIYFYFRSNMSGFLQLSFFLGYNVAMCYAFFLILGSVSFRASMIFVRRIYRVVKSE
*VIVFIYMLFAVPLLALGGRIGYWFRSEFQAPSALNRYPREILPLPWYQKSPCQMFIVGLLSFSIIALELHHLYASLWGYKIFTLPGILFVMFIILLVLTAILSIGLTYIQLSVEDHEWWWRSVFRGGSTAIFMFAYSIYFYFRSNMSGFLQLSFFLGYNVAMCYAFFLILGSVSFRASMIFVRRIYRVV***
MVIVFIYMLFAVPLLALGGRIGYWFRSEFQAPSALNRYPREILPLPWYQKSPCQMFIVGLLSFSIIALELHHLYASLWGYKIFTLPGILFVMFIILLVLTAILSIGLTYIQLSVEDHEWWWRSVFRGGSTAIFMFAYSIYFYFRSNMSGFLQLSFFLGYNVAMCYAFFLILGSVSFRASMIFVRRIYRVVKSE
MVIVFIYMLFAVPLLALGGRIGYWFRSEFQAPSALNRYPREILPLPWYQKSPCQMFIVGLLSFSIIALELHHLYASLWGYKIFTLPGILFVMFIILLVLTAILSIGLTYIQLSVEDHEWWWRSVFRGGSTAIFMFAYSIYFYFRSNMSGFLQLSFFLGYNVAMCYAFFLILGSVSFRASMIFVRRIYRVVKSE
MVIVFIYMLFAVPLLALGGRIGYWFRSEFQAPSALNRYPREILPLPWYQKSPCQMFIVGLLSFSIIALELHHLYASLWGYKIFTLPGILFVMFIILLVLTAILSIGLTYIQLSVEDHEWWWRSVFRGGSTAIFMFAYSIYFYFRSNMSGFLQLSFFLGYNVAMCYAFFLILGSVSFRASMIFVRRIYRVVKSE
iHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooo
oooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiii
ooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiii
oooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiii
oooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MVIVFIYMLFAVPLLALGGRIGYWFRSEFQAPSALNRYPREILPLPWYQKSPCQMFIVGLLSFSIIALELHHLYASLWGYKIFTLPGILFVMFIILLVLTAILSIGLTYIQLSVEDHEWWWRSVFRGGSTAIFMFAYSIYFYFRSNMSGFLQLSFFLGYNVAMCYAFFLILGSVSFRASMIFVRRIYRVVKSE
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query193 2.2.26 [Sep-21-2011]
Q54ZW0587 Putative phagocytic recep yes no 0.989 0.325 0.427 2e-40
O15321606 Transmembrane 9 superfami yes no 0.937 0.298 0.472 2e-39
Q5R8F1606 Transmembrane 9 superfami yes no 0.937 0.298 0.472 3e-39
A4IFE9606 Transmembrane 9 superfami yes no 0.937 0.298 0.472 3e-39
Q9DBU0606 Transmembrane 9 superfami yes no 0.937 0.298 0.472 3e-39
Q66HF2589 Transmembrane 9 superfami yes no 0.849 0.278 0.439 7e-32
Q8BH24643 Transmembrane 9 superfami no no 0.932 0.279 0.329 8e-23
Q4KLL4643 Transmembrane 9 superfami no no 0.932 0.279 0.329 8e-23
Q5RDY2642 Transmembrane 9 superfami no no 0.932 0.280 0.329 1e-22
Q92544642 Transmembrane 9 superfami no no 0.932 0.280 0.329 1e-22
>sp|Q54ZW0|PHG1B_DICDI Putative phagocytic receptor 1b OS=Dictyostelium discoideum GN=phg1b PE=2 SV=1 Back     alignment and function desciption
 Score =  165 bits (418), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 82/192 (42%), Positives = 128/192 (66%), Gaps = 1/192 (0%)

Query: 3   IVFIYMLFAVPLLALGGRIGYWFRSEFQAPSALNRYPREILPLPWYQKSPCQMFIVGLLS 62
           ++ I++    PL  +GG  G      F+AP     +PRE+ P+ WY++ PCQ+ I G L 
Sbjct: 396 VITIWLFVGFPLTVVGGIAGRRLSENFEAPCRTKNFPREVPPIQWYRRLPCQILIAGFLP 455

Query: 63  FSIIALELHHLYASLWGYKIFTLPGILFVMFIILLVLTAILSIGLTYIQLSVEDHEWWWR 122
           FS I +EL +++ S+WG+  +TL GIL ++F+IL+ +T  +++ LTY QLS+EDH+WWW 
Sbjct: 456 FSAIYIELFYIFNSVWGHSTYTLYGILCLVFLILINVTVCITVALTYFQLSMEDHKWWWN 515

Query: 123 SVFRGGSTAIF-MFAYSIYFYFRSNMSGFLQLSFFLGYNVAMCYAFFLILGSVSFRASMI 181
           S   GGST +F       Y+Y+ S+M G LQ +F+  Y + +C+ FF++LG+V F +S+I
Sbjct: 516 SFINGGSTVVFIYMYSIYYYYYISHMYGLLQATFYFTYMLIVCFFFFILLGTVGFYSSLI 575

Query: 182 FVRRIYRVVKSE 193
           FV+RIYR +KS+
Sbjct: 576 FVKRIYRNLKSD 587




Involved in adhesion and phagocytosis of hydrophilic particles.
Dictyostelium discoideum (taxid: 44689)
>sp|O15321|TM9S1_HUMAN Transmembrane 9 superfamily member 1 OS=Homo sapiens GN=TM9SF1 PE=2 SV=2 Back     alignment and function description
>sp|Q5R8F1|TM9S1_PONAB Transmembrane 9 superfamily member 1 OS=Pongo abelii GN=TM9SF1 PE=2 SV=1 Back     alignment and function description
>sp|A4IFE9|TM9S1_BOVIN Transmembrane 9 superfamily member 1 OS=Bos taurus GN=TM9SF1 PE=2 SV=1 Back     alignment and function description
>sp|Q9DBU0|TM9S1_MOUSE Transmembrane 9 superfamily member 1 OS=Mus musculus GN=Tm9sf1 PE=2 SV=2 Back     alignment and function description
>sp|Q66HF2|TM9S1_RAT Transmembrane 9 superfamily member 1 OS=Rattus norvegicus GN=Tm9sf1 PE=2 SV=1 Back     alignment and function description
>sp|Q8BH24|TM9S4_MOUSE Transmembrane 9 superfamily member 4 OS=Mus musculus GN=Tm9sf4 PE=2 SV=1 Back     alignment and function description
>sp|Q4KLL4|TM9S4_RAT Transmembrane 9 superfamily member 4 OS=Rattus norvegicus GN=Tm9sf4 PE=2 SV=1 Back     alignment and function description
>sp|Q5RDY2|TM9S4_PONAB Transmembrane 9 superfamily member 4 OS=Pongo abelii GN=TM9SF4 PE=2 SV=1 Back     alignment and function description
>sp|Q92544|TM9S4_HUMAN Transmembrane 9 superfamily member 4 OS=Homo sapiens GN=TM9SF4 PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query193
449443434 593 PREDICTED: putative phagocytic receptor 1.0 0.325 0.730 5e-78
449492826 409 PREDICTED: putative phagocytic receptor 1.0 0.471 0.730 4e-77
296084915 636 unnamed protein product [Vitis vinifera] 1.0 0.303 0.709 2e-75
225464956 608 PREDICTED: putative phagocytic receptor 1.0 0.317 0.709 3e-75
147789820 920 hypothetical protein VITISV_004804 [Viti 1.0 0.209 0.683 6e-73
224132390 586 predicted protein [Populus trichocarpa] 0.922 0.303 0.719 4e-70
357471659 589 Transmembrane 9 superfamily member [Medi 1.0 0.327 0.642 9e-68
356544724 589 PREDICTED: putative phagocytic receptor 1.0 0.327 0.642 5e-67
224079716 592 predicted protein [Populus trichocarpa] 1.0 0.326 0.541 2e-55
145323800 589 endomembrane protein 70-like protein [Ar 1.0 0.327 0.551 2e-55
>gi|449443434|ref|XP_004139482.1| PREDICTED: putative phagocytic receptor 1b-like [Cucumis sativus] Back     alignment and taxonomy information
 Score =  295 bits (756), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 141/193 (73%), Positives = 162/193 (83%)

Query: 1   MVIVFIYMLFAVPLLALGGRIGYWFRSEFQAPSALNRYPREILPLPWYQKSPCQMFIVGL 60
           +VI+ IY   ++PLL  GG IG+ FRSEFQAP A  R PREI PL W++K PCQMFI GL
Sbjct: 401 IVILLIYFFISLPLLVFGGIIGHRFRSEFQAPCATKRNPREIPPLAWFRKLPCQMFISGL 460

Query: 61  LSFSIIALELHHLYASLWGYKIFTLPGILFVMFIILLVLTAILSIGLTYIQLSVEDHEWW 120
           LSFS + LELHHLYAS+WG+KIFTLP ILF+ FIIL++LTAILS+GLTYIQLSVEDH+WW
Sbjct: 461 LSFSAVVLELHHLYASMWGFKIFTLPSILFITFIILVILTAILSVGLTYIQLSVEDHQWW 520

Query: 121 WRSVFRGGSTAIFMFAYSIYFYFRSNMSGFLQLSFFLGYNVAMCYAFFLILGSVSFRASM 180
           WRSVF GGSTAIFMF Y IYFY RSNM+GFLQL FF+GYN  +CYAFFL+LG +SFR S+
Sbjct: 521 WRSVFSGGSTAIFMFGYCIYFYARSNMNGFLQLCFFVGYNACICYAFFLMLGVISFRVSL 580

Query: 181 IFVRRIYRVVKSE 193
           IFVRRIY  VKSE
Sbjct: 581 IFVRRIYDAVKSE 593




Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449492826|ref|XP_004159113.1| PREDICTED: putative phagocytic receptor 1b-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|296084915|emb|CBI28324.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|225464956|ref|XP_002274254.1| PREDICTED: putative phagocytic receptor 1b-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|147789820|emb|CAN67239.1| hypothetical protein VITISV_004804 [Vitis vinifera] Back     alignment and taxonomy information
>gi|224132390|ref|XP_002328257.1| predicted protein [Populus trichocarpa] gi|222837772|gb|EEE76137.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|357471659|ref|XP_003606114.1| Transmembrane 9 superfamily member [Medicago truncatula] gi|355507169|gb|AES88311.1| Transmembrane 9 superfamily member [Medicago truncatula] Back     alignment and taxonomy information
>gi|356544724|ref|XP_003540797.1| PREDICTED: putative phagocytic receptor 1b-like [Glycine max] Back     alignment and taxonomy information
>gi|224079716|ref|XP_002305925.1| predicted protein [Populus trichocarpa] gi|222848889|gb|EEE86436.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|145323800|ref|NP_001077489.1| endomembrane protein 70-like protein [Arabidopsis thaliana] gi|332190159|gb|AEE28280.1| endomembrane protein 70-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query193
TAIR|locus:2201806589 AT1G08350 [Arabidopsis thalian 1.0 0.327 0.525 4.9e-53
TAIR|locus:2041160592 AT2G01970 "AT2G01970" [Arabido 1.0 0.326 0.505 3.5e-52
TAIR|locus:2006872592 AT1G14670 "AT1G14670" [Arabido 1.0 0.326 0.5 7.2e-52
TAIR|locus:2169100593 AT5G37310 [Arabidopsis thalian 1.0 0.325 0.489 1.7e-50
DICTYBASE|DDB_G0277273587 phg1B "TM9 protein B" [Dictyos 0.989 0.325 0.416 3.9e-44
UNIPROTKB|G3V1B9519 TM9SF1 "Transmembrane 9 superf 1.0 0.371 0.412 4.3e-38
UNIPROTKB|O15321606 TM9SF1 "Transmembrane 9 superf 1.0 0.318 0.412 6.7e-38
MGI|MGI:1921390606 Tm9sf1 "transmembrane 9 superf 1.0 0.318 0.412 6.7e-38
UNIPROTKB|A4IFE9606 TM9SF1 "Transmembrane 9 superf 1.0 0.318 0.412 8.9e-38
UNIPROTKB|F1MCZ2606 TM9SF1 "Transmembrane 9 superf 1.0 0.318 0.412 8.9e-38
TAIR|locus:2201806 AT1G08350 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 549 (198.3 bits), Expect = 4.9e-53, P = 4.9e-53
 Identities = 102/194 (52%), Positives = 134/194 (69%)

Query:     1 MVIVFIYMLFAVPLLALGGRIGYWFRS-EFQAPSALNRYPREILPLPWYQKSPCQMFIVG 59
             ++I+ I+ L  +P L LGG +G  F   EFQ PSA+ R PREI P  WY++   Q+F+ G
Sbjct:   396 VIIILIFTLLNIPFLMLGGVLGNRFGLLEFQPPSAVKRNPREIPPQNWYRRKLYQVFLGG 455

Query:    60 LLSFSIIALELHHLYASLWGYKIFTLPGXXXXXXXXXXXXTAILSIGLTYIQLSVEDHEW 119
              + FS + LE H LYASLWG+KI+T PG            ++ + I LTYIQLS EDHEW
Sbjct:   456 FVPFSAVVLEWHQLYASLWGFKIYTSPGIMLFTFIVLIFLSSSVGIILTYIQLSGEDHEW 515

Query:   120 WWRSVFRGGSTAIFMFAYSIYFYFRSNMSGFLQLSFFLGYNVAMCYAFFLILGSVSFRAS 179
             WWRS+  GG TA+FM+ Y + FY RS+M+GFLQLSF+LGY   +CYA FL+LG++SF AS
Sbjct:   516 WWRSILCGGFTAVFMYGYGVLFYLRSDMTGFLQLSFYLGYTALLCYALFLVLGTISFLAS 575

Query:   180 MIFVRRIYRVVKSE 193
             ++F+R IYR VK E
Sbjct:   576 LMFIRHIYRSVKLE 589




GO:0005739 "mitochondrion" evidence=ISM
GO:0016021 "integral to membrane" evidence=IEA;ISS
GO:0009524 "phragmoplast" evidence=TAS
GO:0005484 "SNAP receptor activity" evidence=IPI
GO:0006944 "cellular membrane fusion" evidence=IMP
TAIR|locus:2041160 AT2G01970 "AT2G01970" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2006872 AT1G14670 "AT1G14670" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2169100 AT5G37310 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0277273 phg1B "TM9 protein B" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
UNIPROTKB|G3V1B9 TM9SF1 "Transmembrane 9 superfamily member 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|O15321 TM9SF1 "Transmembrane 9 superfamily member 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
MGI|MGI:1921390 Tm9sf1 "transmembrane 9 superfamily member 1" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|A4IFE9 TM9SF1 "Transmembrane 9 superfamily member 1" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1MCZ2 TM9SF1 "Transmembrane 9 superfamily member 1" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query193
pfam02990518 pfam02990, EMP70, Endomembrane protein 70 5e-49
>gnl|CDD|217309 pfam02990, EMP70, Endomembrane protein 70 Back     alignment and domain information
 Score =  165 bits (421), Expect = 5e-49
 Identities = 63/150 (42%), Positives = 96/150 (64%), Gaps = 1/150 (0%)

Query: 2   VIVFIYMLFAVPLLALGGRIGYWFRSEFQAPSALNRYPREILPLPWYQKSPCQMFIVGLL 61
            ++ ++ L +VPL  LGG +G+  R+  Q P   N+ PR+I   PWY      + + G+L
Sbjct: 368 ALLLLWFLVSVPLTFLGGIVGFRNRAGEQHPVRTNQIPRQIPEQPWYLSPLPGILMGGIL 427

Query: 62  SFSIIALELHHLYASLWGYKIFTLPGILFVMFIILLVLTAILSIGLTYIQLSVEDHEWWW 121
            F  I +EL  ++ SLW +KI+ + G LF++FIIL+V+ + ++I LTY QL  ED+ WWW
Sbjct: 428 PFGAIFIELFFIFTSLWLHKIYYMFGFLFLVFIILVVVCSEVTIVLTYFQLCAEDYRWWW 487

Query: 122 RSVFRGGSTAIFMFAYSI-YFYFRSNMSGF 150
           RS    GSTA+++F YSI YF+ +  +SGF
Sbjct: 488 RSFLTSGSTAVYVFLYSIYYFFTKLKISGF 517


Length = 518

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 193
KOG1278628 consensus Endosomal membrane proteins, EMP70 [Intr 100.0
KOG1277593 consensus Endosomal membrane proteins, EMP70 [Intr 100.0
PF02990521 EMP70: Endomembrane protein 70; InterPro: IPR00424 100.0
>KOG1278 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
Probab=100.00  E-value=4.4e-76  Score=541.73  Aligned_cols=191  Identities=38%  Similarity=0.842  Sum_probs=188.5

Q ss_pred             chhhhHHhhhcchhhhhhhhhcccccCCCCCccCCCCCCCCCCCCCcCCcchhHHhhhhhhHHHHHHHHHHHHHhhhccc
Q 029473            2 VIVFIYMLFAVPLLALGGRIGYWFRSEFQAPSALNRYPREILPLPWYQKSPCQMFIVGLLSFSIIALELHHLYASLWGYK   81 (193)
Q Consensus         2 ~l~~lw~~v~~PL~~lG~~~g~~~~~~~~~P~~~n~ipR~IP~~~~y~~~~~~~l~~GilPF~~i~vEl~~i~~slW~~~   81 (193)
                      .++++||+||+||+++||++|+| ++++|+|+||||||||||+||||+|+.+.++++|++||+++++||+||++|+|.||
T Consensus       437 ~ll~LwF~isVPLsf~G~y~g~k-k~~~e~PvrTNqIpRqIP~q~~y~~~~~~ili~GilPFg~ifIELfFI~~SiW~~q  515 (628)
T KOG1278|consen  437 ALLFLWFGISVPLSFVGGYFGFK-KPAIEHPVRTNQIPRQIPEQPWYLNPIPSILIAGILPFGAIFIELFFILSSIWLNQ  515 (628)
T ss_pred             HHHHHHHHhhhhHHHhhHHhhcc-CCCCCCCcccCCCcccCCCCccccchhhHHHhhcccchHHHHHHHHHHHHHHHhhh
Confidence            57899999999999999999999 57889999999999999999999999999999999999999999999999999999


Q ss_pred             chhhhHHHHHHHHHHHHHHHHHHHHHhhhccccCCCceeeeeeecCChhHHHHHHHHHHHhh-hhcccCcchhhHHHHHH
Q 029473           82 IFTLPGILFVMFIILLVLTAILSIGLTYIQLSVEDHEWWWRSVFRGGSTAIFMFAYSIYFYF-RSNMSGFLQLSFFLGYN  160 (193)
Q Consensus        82 ~yy~fgfL~~~~iil~i~~~~vsI~~~Y~~L~~Edy~WwWrSF~~~gs~~~y~flYsi~y~~-~~~~~g~~~~~lyf~ys  160 (193)
                      +||+||||++++++|+++|+|+||++||+|||+||||||||||++||++|+|+|+||++|++ |++++|++++++|+|||
T Consensus       516 fYY~FGFLFlvfiiLvvtcaeisIvl~Yf~LC~Edy~WwWRsF~~sG~~avY~fiYsi~Y~~~kL~i~g~~s~~LYfgYs  595 (628)
T KOG1278|consen  516 FYYMFGFLFLVFIILVVTCAEISIVLTYFQLCAEDYNWWWRSFLTSGSSAVYVFIYSIFYFFTKLEISGFVSAVLYFGYS  595 (628)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccceeeeeeeccCcchhhHHHHHHhhhheeeeecccchhHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999 99999999999999999


Q ss_pred             HHHHHHHHHHhhhhHHHHHHHHHHHHhhcccCC
Q 029473          161 VAMCYAFFLILGSVSFRASMIFVRRIYRVVKSE  193 (193)
Q Consensus       161 ~l~s~~~~l~~GsiGflas~~Fv~~IY~~iK~d  193 (193)
                      ++++++++++||||||+||+|||||||+++|+|
T Consensus       596 li~~~~~~l~tGtIGF~a~~~Fv~kIYssvKiD  628 (628)
T KOG1278|consen  596 LIISLLFFLLTGTIGFLAAFWFVRKIYSSVKID  628 (628)
T ss_pred             HHHHHHHHHHhccHHHHHHHHHHHHHhhheecC
Confidence            999999999999999999999999999999999



>KOG1277 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00