Citrus Sinensis ID: 029499

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190--
Protein Sequence
MGGGTEAFPDLGSHCQHQDCHQLDFLPFKCDGCHKVFCFEHRSFKSHECPKSDIKSRKVIVCEVCSVSIETTGEFGEGEKTMLEKHKKSGDCDPRKQKKPSCPVKRCKEKLTFSNTATCKTCNLKVCLKHRFPADHSCKKDSLLGKNAAADAAVGKGRWNDKFLFALASRNGKECSKCDRGSSSSSPSVKAY
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccEEccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHccccccHHHHHHHHHHcccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccccccccccEEcccccccEHHHcccHHHcccccccccccEEEEcccccccccccccccccccHEHHHcccccccccccccccccccccccEEEEEcccEEcccccccEEEcccccccccccccccccccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccEcc
Coil and Loop (DISEMBL)
mgggteafpdlgshcqhqdchqldflpfkcdgchkvfcfehrsfkshecpksdiksrKVIVCEVCSVsiettgefgeGEKTMLEKhkksgdcdprkqkkpscpvkrckekltfsntatcktcnlkvclkhrfpadhsckkdsllgkNAAADaavgkgrwNDKFLFALASrngkecskcdrgssssspsvkay
Flexible Loop (DISEMBL)
MGGGTEAFPDLGSHCQHQDCHQLDFLPFKCDGCHKVFCFEHRSfkshecpksdiksrkvIVCEVCSVsiettgefgegektmlekhkksgdcdprkqkkpscpvkrckekltfsntatcktcnLKVCLKHRFPAdhsckkdsllGKNAAADaavgkgrwNDKFLFALASrngkecskcdrgssssspsvkay
Low Complexity Region (SEG)
MGGGTEAFPDLGSHCQHQDCHQLDFLPFKCDGCHKVFCFEHRSFKSHECPKSDIKSRKVIVCEVCSVSIettgefgegektMLEKHKKSGDCDPRKQKKPSCPVKRCKEKLTFSNTATCKTCNLKVCLKHRFPADHSCKKDSLLGKNAAADAAVGKGRWNDKFLFALASRNGKECSKCDRGssssspsVKAY
Disordered region (IsUnstruct)
************SHCQHQDCHQLDFLPFKCDGCHKVFCFEHRSFKSHECPKSDIKSRKVIVCEVCSVSIETTG*********************************CKEKLTFSNTATCKTCNLKVCLKHRFPADHSCKKDSLLGKNAAADAAVGKGRWNDKFLFALA************************
Disordered Region (DISOPRED)
****T*A*PDLGSHCQHQDCHQLDFLPFKCDGCHKVFCFEHRSFKSHECPKSDIKSRKVIVCEVC***********************************************FSNTATCKTCNLKVCLKHRFPAD*********************************************************
Disordered Region (DISEMBL)
MGGGTEAFPDLGSHCQHQDCHQLDFLPFKCDGCHKVFCFEHRSFKSHECPKSDIKSRKVIVCEVCSVSIETTGEFGEGEKTML********************VKRCKEKLTFSNTATCKTCNLKVCLKHRFPADHSCKKDSLLGKNAAADAAVGKGRWNDKFLFALASRN*********************
Disordered Region (DISPRO)
*******FPDLGSHCQHQDCHQLDFLPFKCDGCHKVFCFEHRSFKSHECPKSDIKSRKVIVCEVCSVSIETTGEFGEGEKTMLEKHKKSGDCDPRKQKKPSCPVKRCKEKLTFSNTATCKTCNLKVCLKHRFPADHSCKK****************************************************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGGGTEAFPDLGSHCQHQDCHQLDFLPFKCDGCHKVFCFEHRSFKSHECPKSDIKSRKVIVCEVCSVSIETTGEFGEGEKTMLEKHKKSGDCDPRKQKKPSCPVKRCKEKLTFSNTATCKTCNLKVCLKHRFPADHSCKKDSLLGKNAAADAAVGKGRWNDKFLFALASRNGKECSKCDRGSSSSSPSVKAY
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	192	2.2.26 [Sep-21-2011]
Q67YE6	186	Zinc finger AN1 domain-co	yes	no	0.869	0.897	0.626	3e-57
Q6H595	188	Zinc finger AN1 domain-co	yes	no	0.692	0.707	0.582	4e-39
Q8VZ42	279	Zinc finger AN1 and C2H2	no	no	0.687	0.473	0.489	9e-31
Q9SCM4	249	Zinc finger AN1 and C2H2	no	no	0.687	0.530	0.467	1e-29
Q0D5B9	290	Zinc finger AN1 and C2H2	no	no	0.687	0.455	0.467	8e-29
Q8WV99	257	AN1-type zinc finger prot	yes	no	0.656	0.490	0.364	4e-17
Q91X58	257	AN1-type zinc finger prot	yes	no	0.656	0.490	0.364	7e-17
Q4KLG9	257	AN1-type zinc finger prot	yes	no	0.656	0.490	0.364	1e-16
Q5R966	194	AN1-type zinc finger prot	no	no	0.677	0.670	0.368	1e-15
Q55GW8	391	AN1-type zinc finger and	yes	no	0.682	0.335	0.328	3e-15

>sp|Q67YE6|SAP12_ARATH Zinc finger AN1 domain-containing stress-associated protein 12 OS=Arabidopsis thaliana GN=SAP12 PE=2 SV=2

 Score =  221 bits (562), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 109/174 (62%), Positives = 129/174 (74%), Gaps = 7/174 (4%)

Query: 2   GGGTEAFPDLGSHCQHQDCHQLDFLPFKCDGCHKVFCFEHRSFKSHECPKSDIKSRKVIV 61
           GGGTEAFPDLG HCQ  DC  LDFLPF CDGC  VFC EHRS+KSH CPKSD  SR V +
Sbjct: 3   GGGTEAFPDLGEHCQDPDCKLLDFLPFTCDGCKLVFCLEHRSYKSHNCPKSDHGSRTVSI 62

Query: 62  CEVCSVSIETTGEFGEGEKTMLEKHKKSGDCDPRKQKKPSCPVKRCKEKLTFSNTATCKT 121
           CE CS++IETTG   +G K++LEKH++SGDCDP K+KKP+CPVKRCKE LTF+N  TCK 
Sbjct: 63  CETCSIAIETTGFDEKGIKSLLEKHERSGDCDPNKKKKPTCPVKRCKEILTFANNLTCKY 122

Query: 122 CNLKVCLKHRFPADHSCKKDSLLGKNAAADAAVGKGRWNDKFLFALASRNGKEC 175
           C +K CLKHRFP DH C K  +   N A  ++    RWN++F+ AL+ RN K C
Sbjct: 123 CGVKFCLKHRFPTDHVCNKKII---NTAGTSS----RWNERFMEALSLRNQKGC 169

May be involved in environmental stress response.
Arabidopsis thaliana (taxid: 3702)

>sp|Q6H595|SAP17_ORYSJ Zinc finger AN1 domain-containing stress-associated protein 17 OS=Oryza sativa subsp. japonica GN=SAP17 PE=2 SV=1

 Score =  160 bits (406), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 78/134 (58%), Positives = 97/134 (72%), Gaps = 1/134 (0%)

Query: 4   GTEAFPDLGSHCQHQDCHQLDFLPFKCDGCHKVFCFEHRSFKSHECPKSDIKSRKVIVCE 63
           GTEAFPDLG+ C  +DC+QLDFLPF CDGC K FC EHR+++ H C ++  + R V+VCE
Sbjct: 5   GTEAFPDLGAQCDREDCNQLDFLPFDCDGCGKTFCAEHRTYRDHGCARAADQGRTVVVCE 64

Query: 64  VCSVSIE-TTGEFGEGEKTMLEKHKKSGDCDPRKQKKPSCPVKRCKEKLTFSNTATCKTC 122
            C  +IE   G+ G  +  +LE H +S  CDP +++KP CPV RCKE LTFSNT+ CK C
Sbjct: 65  ACGDAIERRAGDGGGDDAAVLEAHARSRRCDPARKRKPRCPVPRCKETLTFSNTSGCKGC 124

Query: 123 NLKVCLKHRFPADH 136
             KVCLKHRFPADH
Sbjct: 125 GQKVCLKHRFPADH 138

May be involved in environmental stress response.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q8VZ42|SAP11_ARATH Zinc finger AN1 and C2H2 domain-containing stress-associated protein 11 OS=Arabidopsis thaliana GN=SAP11 PE=2 SV=1

 Score =  133 bits (334), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 68/139 (48%), Positives = 83/139 (59%), Gaps = 7/139 (5%)

Query: 4   GTEAFPDLGSHCQHQDCHQLDFLPFKCDGCHKVFCFEHRSFKSHECPKSDIKSRKVIVCE 63
           GT  FPDLG HC    C Q+DFLPF CD C +VFC +HRS+  H CPK D +   V++C 
Sbjct: 2   GTPEFPDLGKHCSVDVCKQIDFLPFTCDRCLQVFCLDHRSYMKHSCPKGDREDVTVVICP 61

Query: 64  VCSVSIETTGEFGEGEKTMLEKHKKSGDCDP----RKQKKPSCPVKRCKEKLTFSNTATC 119
           +C+  +       E      EKH  + DCDP    +  KK  CPV RCKE LTFSNT  C
Sbjct: 62  LCAKGVRLNP--NEDPNITWEKHVNT-DCDPSNYEKATKKKKCPVPRCKEYLTFSNTIKC 118

Query: 120 KTCNLKVCLKHRFPADHSC 138
           + CN+  CLKHRF  DH+C
Sbjct: 119 RDCNVDHCLKHRFGPDHTC 137

May be involved in environmental stress response.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SCM4|SAP13_ARATH Zinc finger AN1 and C2H2 domain-containing stress-associated protein 13 OS=Arabidopsis thaliana GN=SAP13 PE=2 SV=1

 Score =  129 bits (324), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 65/139 (46%), Positives = 84/139 (60%), Gaps = 7/139 (5%)

Query: 4   GTEAFPDLGSHCQHQDCHQLDFLPFKCDGCHKVFCFEHRSFKSHECPKSDIKSRKVIVCE 63
           GT  FPDLG HC    C Q+DFLPF CD C +V+C +HRS+  H+CPK +     V++C 
Sbjct: 2   GTPEFPDLGKHCSVDYCKQIDFLPFTCDRCLQVYCLDHRSYMKHDCPKGNRGDVTVVICP 61

Query: 64  VCSVSIETTGEFGEGEKTMLEKHKKSGDCDP----RKQKKPSCPVKRCKEKLTFSNTATC 119
           +C+  +    +  E      EKH  + DCDP    +  KK  CPV RC+E LTFSNT  C
Sbjct: 62  LCAKGVRLNPD--EDPNITWEKHVNT-DCDPSNYEKAVKKKKCPVPRCRELLTFSNTIKC 118

Query: 120 KTCNLKVCLKHRFPADHSC 138
           + C++  CLKHRF  DHSC
Sbjct: 119 RDCSIDHCLKHRFGPDHSC 137

May be involved in environmental stress response.

Arabidopsis thaliana (taxid: 3702)

>sp|Q0D5B9|SAP16_ORYSJ Zinc finger AN1 and C2H2 domain-containing stress-associated protein 16 OS=Oryza sativa subsp. japonica GN=SAP16 PE=2 SV=2

 Score =  126 bits (317), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 65/139 (46%), Positives = 82/139 (58%), Gaps = 7/139 (5%)

Query: 4   GTEAFPDLGSHCQHQDCHQLDFLPFKCDGCHKVFCFEHRSFKSHECPKSDIKSRKVIVCE 63
           GT  FP+LG HC   DC+Q+DFLPF CD C  VFC +HRS+ SH+CP ++ K   V++C 
Sbjct: 2   GTPEFPNLGKHCSVGDCNQIDFLPFTCDRCDHVFCLQHRSYTSHQCPNANQKDVTVLICP 61

Query: 64  VCSVSIETTGEFGEGEKTMLEKHKKSGDCDP----RKQKKPSCPVKRCKEKLTFSNTATC 119
           +C+  +       E      + H  S DCDP    +  KK  CPV  C+E LTFSNT  C
Sbjct: 62  LCAKGVRLNP--NEDPNITWDTHVNS-DCDPSNYQKVTKKKKCPVPGCRETLTFSNTIRC 118

Query: 120 KTCNLKVCLKHRFPADHSC 138
           K C  + CLKHRF  DH C
Sbjct: 119 KDCTKEHCLKHRFGPDHKC 137

May be involved in environmental stress response.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q8WV99|ZFN2B_HUMAN AN1-type zinc finger protein 2B OS=Homo sapiens GN=ZFAND2B PE=1 SV=1

 Score = 87.8 bits (216), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 50/137 (36%), Positives = 71/137 (51%), Gaps = 11/137 (8%)

Query: 8   FPDLGSHCQHQDCHQLDFLPFKCDGCHKVFCFEHRSFKSHECPKSDIKSRKVIVCEVCSV 67
           FPDLG+HC    C +LDFLP KCD C  +FC +H ++  H C  +  K  +V VC +C+V
Sbjct: 3   FPDLGAHCSEPSCQRLDFLPLKCDACSGIFCADHVAYAQHHCGSAYQKDIQVPVCPLCNV 62

Query: 68  SIETTGEFGEGEKTMLEKHKKSGDC--DPRKQKKP----SCPVKRCKEKLTFSNTATCKT 121
            +      GE     + +H    DC  DP +QK+      C    C+++       TC+ 
Sbjct: 63  PVPVAR--GEPPDRAVGEHIDR-DCRSDPAQQKRKIFTNKCERAGCRQREMMK--LTCER 117

Query: 122 CNLKVCLKHRFPADHSC 138
           C+   C+KHR P DH C
Sbjct: 118 CSRNFCIKHRHPLDHDC 134

Homo sapiens (taxid: 9606)

>sp|Q91X58|ZFN2B_MOUSE AN1-type zinc finger protein 2B OS=Mus musculus GN=Zfand2b PE=1 SV=1

 Score = 87.0 bits (214), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 50/137 (36%), Positives = 69/137 (50%), Gaps = 11/137 (8%)

Query: 8   FPDLGSHCQHQDCHQLDFLPFKCDGCHKVFCFEHRSFKSHECPKSDIKSRKVIVCEVCSV 67
           FPDLG+HC    C +LDFLP KCD C  +FC +H ++  H C  +  K  +V VC +C+V
Sbjct: 3   FPDLGAHCSEPSCQRLDFLPLKCDACSGIFCADHVAYAQHHCGSAYQKDIQVPVCPLCNV 62

Query: 68  SIETTGEFGEGEKTMLEKHKKSGDC--DPRKQKKP----SCPVKRCKEKLTFSNTATCKT 121
            +      GE     + +H    DC  DP +QK+      C    C+++       TC  
Sbjct: 63  PVPVA--RGEPPDRAVGEHIDR-DCRSDPAQQKRKIFTNKCERSGCRQREMM--KLTCDR 117

Query: 122 CNLKVCLKHRFPADHSC 138
           C    C+KHR P DH C
Sbjct: 118 CGRNFCIKHRHPLDHEC 134

Mus musculus (taxid: 10090)

>sp|Q4KLG9|ZFN2B_RAT AN1-type zinc finger protein 2B OS=Rattus norvegicus GN=Zfand2b PE=2 SV=1

 Score = 85.9 bits (211), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 50/137 (36%), Positives = 69/137 (50%), Gaps = 11/137 (8%)

Query: 8   FPDLGSHCQHQDCHQLDFLPFKCDGCHKVFCFEHRSFKSHECPKSDIKSRKVIVCEVCSV 67
           FPDLG+HC    C +LDFLP KCD C  +FC +H ++  H C  +  K  +V VC +C+V
Sbjct: 3   FPDLGAHCSEPSCQRLDFLPLKCDACSGIFCADHVAYAHHHCGSAYQKDIQVPVCPLCNV 62

Query: 68  SIETTGEFGEGEKTMLEKHKKSGDC--DPRKQKKP----SCPVKRCKEKLTFSNTATCKT 121
            +      GE     + +H    DC  DP +QK+      C    C+++       TC  
Sbjct: 63  PVPVA--RGEPPDRAVGEHIDR-DCRSDPAQQKRKIFTNKCERSGCRQREMMK--LTCDR 117

Query: 122 CNLKVCLKHRFPADHSC 138
           C    C+KHR P DH C
Sbjct: 118 CGRNFCIKHRHPLDHDC 134

Rattus norvegicus (taxid: 10116)

>sp|Q5R966|ZFN2A_PONAB AN1-type zinc finger protein 2A OS=Pongo abelii GN=ZFAND2A PE=3 SV=1

 Score = 83.2 bits (204), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 52/141 (36%), Positives = 73/141 (51%), Gaps = 11/141 (7%)

Query: 8   FPDLGSHCQHQDCHQLDFLPFKCDGCHKVFCFEHRSFKSHECPKSDIKSRKVIVCEVCSV 67
           FPDLG HC  + C QLDFLP KCD C + FC +H ++ +H+CP +  K   V VC +C+ 
Sbjct: 3   FPDLGKHCSEKTCKQLDFLPVKCDACKQDFCKDHFTYAAHKCPFAFQKDVHVPVCPLCNT 62

Query: 68  SIETTGEFGEGEKTMLEKHKKSGDCDPRKQKKPS------CPVKRCKEKLTFSNTATCKT 121
            I    + G+    ++  H    DCD    KK        C  + CK+K       +C  
Sbjct: 63  PIPV--KKGQIPDVVVGDHIDR-DCDSHPGKKKEKIFTYRCSKEGCKKKEMLQ--MSCAQ 117

Query: 122 CNLKVCLKHRFPADHSCKKDS 142
           C+   C++HR P DHSC+  S
Sbjct: 118 CHGNFCIQHRHPLDHSCRHGS 138

Pongo abelii (taxid: 9601)

>sp|Q55GW8|Y8260_DICDI AN1-type zinc finger and UBX domain-containing protein DDB_G0268260 OS=Dictyostelium discoideum GN=DDB_G0268260 PE=4 SV=2

 Score = 81.6 bits (200), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 46/140 (32%), Positives = 70/140 (50%), Gaps = 9/140 (6%)

Query: 5   TEAFPDLGSHCQHQDCHQLDFLPFKCDGCHKVFCFEHRSFKSHECPKSDIKSRKVI-VCE 63
           T     +G HC   DC  LDFLPF CD C+  FC EH+ +++H+C   + +  K++  C 
Sbjct: 22  TYQLDHIGVHCNVTDCRVLDFLPFNCDLCNLSFCMEHKGYENHKCKNIEQRENKIVHPCP 81

Query: 64  VCS--VSIETTGEFGEGEKTMLEKHKKSGDCDPRKQKKP---SCPVKRCKEKLTFSNTAT 118
           VC+  + +++     +  + ++  H  + DC   + K P    C +K CK          
Sbjct: 82  VCNCLIKVDSLANLDQTVRFIISVHMDT-DCKFNQSKAPKSFKCSLKTCKTSEFVE--VK 138

Query: 119 CKTCNLKVCLKHRFPADHSC 138
           C  C    CLKHRFP +HSC
Sbjct: 139 CDKCKSNYCLKHRFPTNHSC 158

Dictyostelium discoideum (taxid: 44689)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	192
388502980	193	unknown [Medicago truncatula]	0.963	0.958	0.647	2e-66
449459430	195	PREDICTED: zinc finger AN1 domain-contai	0.958	0.943	0.646	4e-65
356571700	186	PREDICTED: LOW QUALITY PROTEIN: zinc fin	0.947	0.978	0.649	1e-64
225452566	189	PREDICTED: zinc finger AN1 domain-contai	0.947	0.962	0.629	4e-62
147852952	189	hypothetical protein VITISV_006143 [Viti	0.947	0.962	0.624	4e-62
193237571	195	transcription factor C2H2 [Lotus japonic	0.973	0.958	0.641	1e-61
351721581	218	uncharacterized protein LOC100500384 [Gl	0.890	0.784	0.657	9e-60
255552720	192	arsenite inducuble RNA associated protei	0.958	0.958	0.664	7e-56
297815096	185	hypothetical protein ARALYDRAFT_347189 [	0.885	0.918	0.610	1e-55
15232930	186	zinc finger AN1 domain-containing stress	0.869	0.897	0.626	2e-55

>gi|388502980|gb|AFK39556.1| unknown [Medicago truncatula]

 Score =  257 bits (656), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 125/193 (64%), Positives = 150/193 (77%), Gaps = 8/193 (4%)

Query: 3   GGTEAFPDLGSHCQHQDCHQLDFLPFKCDGCHKVFCFEHRSFKSHECPKSDIKSRKVIVC 62
           GGTEAFPDLG HCQH DCHQLDFLPF CDGC +VFC EHRS+KSHECPK D  SRKV+VC
Sbjct: 4   GGTEAFPDLGKHCQHVDCHQLDFLPFTCDGCKQVFCVEHRSYKSHECPKPDHNSRKVVVC 63

Query: 63  EVCSVSIETTGEFGEGEKTMLEKHKKSGDCDPRKQKKPSCPVKRCKEKLTFSNTATCKTC 122
           E CS+S+E  G  GE E+ +L+KH+ SG CDP K+KKP+CPVKRCKE LTFSNT+TCKTC
Sbjct: 64  EECSMSMEIRGNMGENEEAILKKHRSSGKCDPSKKKKPTCPVKRCKEILTFSNTSTCKTC 123

Query: 123 NLKVCLKHRFPADHSCKKDSLLGKNAAADAAVGKGRWNDKFLFALASRNGKECSKCDRGS 182
           ++KVCLKHRF ADH+C K    G +++     G GRWN++F+ ALASRNG++C K     
Sbjct: 124 HIKVCLKHRFSADHACSK----GDSSSLTTTAGNGRWNNRFMAALASRNGQDCGKKSGSR 179

Query: 183 SSSS----PSVKA 191
           S++S    PSVKA
Sbjct: 180 STTSPPSNPSVKA 192

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449459430|ref|XP_004147449.1| PREDICTED: zinc finger AN1 domain-containing stress-associated protein 12-like [Cucumis sativus] gi|449515229|ref|XP_004164652.1| PREDICTED: zinc finger AN1 domain-containing stress-associated protein 12-like [Cucumis sativus]

 Score =  252 bits (644), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 126/195 (64%), Positives = 148/195 (75%), Gaps = 11/195 (5%)

Query: 3   GGTEAFPDLGSHCQHQDCHQLDFLPFKCDGCHKVFCFEHRSFKSHECPKSDIKSRKVIVC 62
           GGTEAFPDLG HCQH DCHQLDFLPF CDGC KVFC +HR FKSH+CP+SD  SRKV+VC
Sbjct: 5   GGTEAFPDLGRHCQHSDCHQLDFLPFTCDGCQKVFCLDHRGFKSHDCPQSDRNSRKVVVC 64

Query: 63  EVCSVSIETTGEFGEGEKTMLEKHKKSGDCDPRKQKKPSCPVKRCKEKLTFSNTATCKTC 122
           E+CS SIETTG+ G  E  +LE+H +SGDCDP K+KKP+C VKRC+E LTFSNT  CKTC
Sbjct: 65  EICSTSIETTGKDGGDETKVLERHHESGDCDPSKKKKPTCAVKRCREILTFSNTCVCKTC 124

Query: 123 NLKVCLKHRFPADHSCKKDSLLGKNAAADAAVGKGRWNDKFLFALASRNGKECSKCDR-- 180
            LKVCLKHRFPA+H C      G ++ A A V KGRWN+KF+ AL  R+  +C K +R  
Sbjct: 125 RLKVCLKHRFPAEHGCG-----GPSSRAGAVVDKGRWNEKFMVALGLRSEGDCGKRERAR 179

Query: 181 ----GSSSSSPSVKA 191
               GSS ++PSVKA
Sbjct: 180 TGGKGSSPTAPSVKA 194

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356571700|ref|XP_003554012.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger AN1 domain-containing stress-associated protein 12-like [Glycine max]

 Score =  251 bits (640), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 124/191 (64%), Positives = 149/191 (78%), Gaps = 9/191 (4%)

Query: 3   GGTEAFPDLGSHCQHQDCHQLDFLPFKCDGCHKVFCFEHRSFKSHECPKSDIKSRKVIVC 62
           GGTEAFPDLG HCQH+DC+QLDFLPF CDGC +VFC EHRS+KSH CPKSD  SRKV+VC
Sbjct: 4   GGTEAFPDLGKHCQHRDCNQLDFLPFTCDGCQQVFCLEHRSYKSHSCPKSDHNSRKVVVC 63

Query: 63  EVCSVSIETTGEFGEGEKTMLEKHKKSGDCDPRKQKKPSCPVKRCKEKLTFSNTATCKTC 122
           E CS+SIETTG  G+ +K +L+KH KSG CDP K+KKP+CPVKRCKE LTFSNT+TCKTC
Sbjct: 64  EACSMSIETTGNVGQDKKAILQKHLKSGICDPTKKKKPTCPVKRCKEVLTFSNTSTCKTC 123

Query: 123 NLKVCLKHRFPADHSCKKDSLLGKNAAADAAVGKGRWNDKFLFALASR-NGKECSKCDRG 181
           ++KVCLKHRFPADH+C +         A A+V  G WN++FL  L  + +G+EC+K    
Sbjct: 124 HIKVCLKHRFPADHACSR--------GASASVANGLWNNRFLXLLLGKGSGQECAKNGAT 175

Query: 182 SSSSSPSVKAY 192
              S+PSVKAY
Sbjct: 176 RPPSTPSVKAY 186

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225452566|ref|XP_002280584.1| PREDICTED: zinc finger AN1 domain-containing stress-associated protein 12 [Vitis vinifera] gi|296087723|emb|CBI34979.3| unnamed protein product [Vitis vinifera]

 Score =  243 bits (619), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 119/189 (62%), Positives = 141/189 (74%), Gaps = 7/189 (3%)

Query: 1   MGGGTEAFPDLGSHCQHQDCHQLDFLPFKCDGCHKVFCFEHRSFKSHECPKSDIKSRKVI 60
           MG GTEAFPDLG HCQ  DC+QLDFLPFKCDGCH+VFC EHR++KSHECPK +  SRKV+
Sbjct: 1   MGEGTEAFPDLGRHCQRSDCNQLDFLPFKCDGCHQVFCLEHRTYKSHECPKPEPNSRKVV 60

Query: 61  VCEVCSVSIETTGEFGEGEKTMLEKHKKSGDCDPRKQKKPSCPVKRCKEKLTFSNTATCK 120
           VCE CS SIETTG   + EK MLE+H+KSGDCDP K+KKP CPV+RCKE LTFSNT+TCK
Sbjct: 61  VCETCSTSIETTGRDEKEEKAMLERHEKSGDCDPSKKKKPICPVRRCKEVLTFSNTSTCK 120

Query: 121 TCNLKVCLKHRFPADHSCKKDSLLGKNAAADAAVGKGRWNDKFLFALASRNGKECSKCDR 180
           TC L  CLKHRFP +H+CK      +   +     K RW+DKFL AL +R G +C+K + 
Sbjct: 121 TCQLNFCLKHRFPIEHACK------QRLPSSTTGAKERWSDKFLAALGARIGNDCAK-NG 173

Query: 181 GSSSSSPSV 189
           G + S P  
Sbjct: 174 GRTVSPPGT 182

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147852952|emb|CAN81268.1| hypothetical protein VITISV_006143 [Vitis vinifera]

 Score =  243 bits (619), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 118/189 (62%), Positives = 142/189 (75%), Gaps = 7/189 (3%)

Query: 1   MGGGTEAFPDLGSHCQHQDCHQLDFLPFKCDGCHKVFCFEHRSFKSHECPKSDIKSRKVI 60
           MG GTEAFPDLG HCQ  DC+QLDFLPFKCDGCH+VFC EHR++KSHECPK +  SRKV+
Sbjct: 1   MGXGTEAFPDLGRHCQRSDCNQLDFLPFKCDGCHQVFCLEHRTYKSHECPKPEPNSRKVV 60

Query: 61  VCEVCSVSIETTGEFGEGEKTMLEKHKKSGDCDPRKQKKPSCPVKRCKEKLTFSNTATCK 120
           VCE CS SIETTG   + EK MLE+H+KSG+CDP K+KKP CPV+RCKE LTFSNT+TCK
Sbjct: 61  VCETCSTSIETTGRDEKEEKAMLERHEKSGECDPSKKKKPICPVRRCKEVLTFSNTSTCK 120

Query: 121 TCNLKVCLKHRFPADHSCKKDSLLGKNAAADAAVGKGRWNDKFLFALASRNGKECSKCDR 180
           TC L  CLKHRFP +H+CK      +   +     K RW+DKFL AL +R+G +C+K + 
Sbjct: 121 TCQLNFCLKHRFPIEHACK------QRLPSSTTGAKERWSDKFLAALGARSGNDCAK-NG 173

Query: 181 GSSSSSPSV 189
           G + S P  
Sbjct: 174 GRTVSPPGT 182

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|193237571|dbj|BAG50062.1| transcription factor C2H2 [Lotus japonicus]

 Score =  241 bits (614), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 125/195 (64%), Positives = 151/195 (77%), Gaps = 8/195 (4%)

Query: 3   GGTEAFPDLGSHCQHQDCHQLDFLPFKCDGCHKVFCFEHRSFKSHECPKSDIKSRKVIVC 62
           GGTEAFPDLG HCQH DCHQLDFLPF CD C +VFC EHRS+KSH CPK D  SRKV+VC
Sbjct: 4   GGTEAFPDLGKHCQHHDCHQLDFLPFTCDACKQVFCVEHRSYKSHACPKPDHNSRKVVVC 63

Query: 63  EVCSVSIETTGEFG-EGEKTMLEKHKKSGDCDPRKQKKPSCPVKRCKEKLTFSNTATCKT 121
           E CS+SIETT + G E E+ +L++H KSG+CDP K+KKP CPVKRCKE LTFSN +TCKT
Sbjct: 64  ETCSMSIETTSQVGQEEEEALLKRHLKSGNCDPNKKKKPICPVKRCKEVLTFSNASTCKT 123

Query: 122 CNLKVCLKHRFPADHSCKKDSLLGKNAAADAAVGKGRWNDKFLFALASR-NGKECSK-CD 179
           C +KVCLKHRFPADH+C +   +   + + +A   G WN++FL ALASR  G+ C+K  +
Sbjct: 124 CQVKVCLKHRFPADHACGR---VASASTSSSAAVNGGWNNRFLDALASRIKGQACTKSAE 180

Query: 180 RGSSS--SSPSVKAY 192
           R S+S  S+PSVKAY
Sbjct: 181 RRSTSPPSTPSVKAY 195

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351721581|ref|NP_001237214.1| uncharacterized protein LOC100500384 [Glycine max] gi|255630194|gb|ACU15452.1| unknown [Glycine max]

 Score =  234 bits (598), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 115/175 (65%), Positives = 140/175 (80%), Gaps = 4/175 (2%)

Query: 3   GGTEAFPDLGSHCQHQDCHQLDFLPFKCDGCHKVFCFEHRSFKSHECPKSDIKSRKVIVC 62
           GGTEAFPDLG HCQH+DC+QLDFLPF CDGC ++FC EHRS+KSH C KSD  SRKV+VC
Sbjct: 4   GGTEAFPDLGKHCQHRDCNQLDFLPFTCDGCQQIFCLEHRSYKSHACLKSDHNSRKVVVC 63

Query: 63  EVCSVSIETTGEFGEGEKTMLEKHKKSGDCDPRKQKKPSCPVKRCKEKLTFSNTATCKTC 122
           E CS+SIETTG   + E+ +L+KH KSG+CDP K+KKP CPVKRC+E LTFSNT+TCKTC
Sbjct: 64  EACSMSIETTGHVRQDEEAILQKHLKSGNCDPTKKKKPICPVKRCREVLTFSNTSTCKTC 123

Query: 123 NLKVCLKHRFPADHSCKKDSLLGKNAAADAAVGKGRWNDKFLFALASRNGKECSK 177
           ++KVCLKHRFPADH+       G +A++ A V  G WN++FL A A R G+EC+K
Sbjct: 124 HIKVCLKHRFPADHA----CSRGASASSSACVSNGLWNNRFLTAFAKRTGQECAK 174

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255552720|ref|XP_002517403.1| arsenite inducuble RNA associated protein aip-1, putative [Ricinus communis] gi|223543414|gb|EEF44945.1| arsenite inducuble RNA associated protein aip-1, putative [Ricinus communis]

 Score =  222 bits (565), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 125/188 (66%), Positives = 143/188 (76%), Gaps = 4/188 (2%)

Query: 2   GGGTEAFPDLGSHCQHQDCHQLDFLPFKCDGCHKVFCFEHRSFKSHECPKSDIKSRKVIV 61
            GGTEAFPDLG HCQH +C+QLDFLPF+C+ C KVFC EHRS+KSHEC K D  SRKV+V
Sbjct: 3   AGGTEAFPDLGKHCQHSECNQLDFLPFQCNRCQKVFCLEHRSYKSHECTKPDQNSRKVVV 62

Query: 62  CEVCSVSIETTGEFGEGEKTMLEKHKKSGDCDPRKQKKPSCPVKRCKEKLTFSNTATCKT 121
           CE+CS SIETTG   + EK +LEKH  SGDCDP+K+KKP+C  +RCKE LTFSNT  CKT
Sbjct: 63  CEICSSSIETTGRNEDDEKLILEKHVSSGDCDPKKKKKPTCGARRCKEVLTFSNTCICKT 122

Query: 122 CNLKVCLKHRFPADHSCKKDSLLGKNAAADAAVGKGRWNDKFLFALASRNGKECSKCDRG 181
           C+LKVCLKHRFPADH C K S      AA A  G  R NDKFL A ASRNGK+C+K +  
Sbjct: 123 CHLKVCLKHRFPADHECNKAS---SAGAAAAGGGGRRSNDKFLVAWASRNGKDCAK-NAK 178

Query: 182 SSSSSPSV 189
            SSS PS+
Sbjct: 179 PSSSKPSI 186

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297815096|ref|XP_002875431.1| hypothetical protein ARALYDRAFT_347189 [Arabidopsis lyrata subsp. lyrata] gi|297321269|gb|EFH51690.1| hypothetical protein ARALYDRAFT_347189 [Arabidopsis lyrata subsp. lyrata]

 Score =  221 bits (564), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 108/177 (61%), Positives = 127/177 (71%), Gaps = 7/177 (3%)

Query: 1   MGGGTEAFPDLGSHCQHQDCHQLDFLPFKCDGCHKVFCFEHRSFKSHECPKSDIKSRKVI 60
           M GGTEAFPDLG HCQ+ DC  LDFLPF CDGC  VFC EHRS+KSH CP SD  SR V 
Sbjct: 1   MAGGTEAFPDLGEHCQNLDCKLLDFLPFTCDGCKLVFCLEHRSYKSHSCPNSDHGSRTVS 60

Query: 61  VCEVCSVSIETTGEFGEGEKTMLEKHKKSGDCDPRKQKKPSCPVKRCKEKLTFSNTATCK 120
           +CE CS++IETTG   EG K++LEKH++SGDCDP K+KKP CPVKRCKE LTF+N  TCK
Sbjct: 61  ICETCSLAIETTGFDEEGIKSLLEKHERSGDCDPNKKKKPICPVKRCKEVLTFANNLTCK 120

Query: 121 TCNLKVCLKHRFPADHSCKKDSLLGKNAAADAAVGKGRWNDKFLFALASRNGKECSK 177
            C +K CLKHRFP DH C K ++         A    RWN++F+ AL+ RN K C +
Sbjct: 121 DCGIKFCLKHRFPTDHVCNKKTI-------TTARTSSRWNERFMEALSLRNEKGCGR 170

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15232930|ref|NP_189461.1| zinc finger AN1 domain-containing stress-associated protein 12 [Arabidopsis thaliana] gi|122069682|sp|Q67YE6.2|SAP12_ARATH RecName: Full=Zinc finger AN1 domain-containing stress-associated protein 12; Short=AtSAP12 gi|5006473|gb|AAD37511.1|AF139098_1 putative zinc finger protein [Arabidopsis thaliana] gi|11994583|dbj|BAB02638.1| zinc finger protein-like [Arabidopsis thaliana] gi|51971687|dbj|BAD44508.1| putative zinc finger protein (PMZ) [Arabidopsis thaliana] gi|89111886|gb|ABD60715.1| At3g28210 [Arabidopsis thaliana] gi|332643895|gb|AEE77416.1| zinc finger AN1 domain-containing stress-associated protein 12 [Arabidopsis thaliana]

 Score =  221 bits (562), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 109/174 (62%), Positives = 129/174 (74%), Gaps = 7/174 (4%)

Query: 2   GGGTEAFPDLGSHCQHQDCHQLDFLPFKCDGCHKVFCFEHRSFKSHECPKSDIKSRKVIV 61
           GGGTEAFPDLG HCQ  DC  LDFLPF CDGC  VFC EHRS+KSH CPKSD  SR V +
Sbjct: 3   GGGTEAFPDLGEHCQDPDCKLLDFLPFTCDGCKLVFCLEHRSYKSHNCPKSDHGSRTVSI 62

Query: 62  CEVCSVSIETTGEFGEGEKTMLEKHKKSGDCDPRKQKKPSCPVKRCKEKLTFSNTATCKT 121
           CE CS++IETTG   +G K++LEKH++SGDCDP K+KKP+CPVKRCKE LTF+N  TCK 
Sbjct: 63  CETCSIAIETTGFDEKGIKSLLEKHERSGDCDPNKKKKPTCPVKRCKEILTFANNLTCKY 122

Query: 122 CNLKVCLKHRFPADHSCKKDSLLGKNAAADAAVGKGRWNDKFLFALASRNGKEC 175
           C +K CLKHRFP DH C K  +   N A  ++    RWN++F+ AL+ RN K C
Sbjct: 123 CGVKFCLKHRFPTDHVCNKKII---NTAGTSS----RWNERFMEALSLRNQKGC 169

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	192
TAIR|locus:2098313	186	PMZ [Arabidopsis thaliana (tax	0.880	0.908	0.585	4.2e-56
TAIR|locus:504955994	279	AT2G41835 "AT2G41835" [Arabido	0.687	0.473	0.482	1.5e-33
TAIR|locus:2103533	249	AT3G57480 "AT3G57480" [Arabido	0.885	0.682	0.414	5.2e-33
ZFIN|ZDB-GENE-040426-1596	282	zfand2a "zinc finger, AN1-type	0.677	0.460	0.382	2.9e-23
FB|FBgn0031535	253	CG12795 [Drosophila melanogast	0.661	0.501	0.373	1.3e-20
UNIPROTKB|B4DEN4	225	ZFAND2B "cDNA FLJ60439, highly	0.656	0.56	0.350	2.1e-20
UNIPROTKB|B8ZZ56	145	ZFAND2B "AN1-type zinc finger	0.656	0.868	0.350	2.1e-20
UNIPROTKB|E7EV05	214	ZFAND2B "AN1-type zinc finger	0.656	0.588	0.350	2.1e-20
UNIPROTKB|E9PFU9	224	ZFAND2B "AN1-type zinc finger	0.656	0.562	0.350	2.1e-20
UNIPROTKB|Q8WV99	257	ZFAND2B "AN1-type zinc finger	0.656	0.490	0.350	2.1e-20

TAIR|locus:2098313 PMZ [Arabidopsis thaliana (taxid:3702)]

 Score = 578 (208.5 bits), Expect = 4.2e-56, P = 4.2e-56
 Identities = 103/176 (58%), Positives = 122/176 (69%)

Query:     2 GGGTEAFPDLGSHCQHQDCHQLDFLPFKCDGCHKVFCFEHRSFKSHECPKSDIKSRKVIV 61
             GGGTEAFPDLG HCQ  DC  LDFLPF CDGC  VFC EHRS+KSH CPKSD  SR V +
Sbjct:     3 GGGTEAFPDLGEHCQDPDCKLLDFLPFTCDGCKLVFCLEHRSYKSHNCPKSDHGSRTVSI 62

Query:    62 CEVCSVSIXXXXXXXXXXXXMLEKHKKSGDCDPRKQKKPSCPVKRCKEKLTFSNTATCKT 121
             CE CS++I            +LEKH++SGDCDP K+KKP+CPVKRCKE LTF+N  TCK 
Sbjct:    63 CETCSIAIETTGFDEKGIKSLLEKHERSGDCDPNKKKKPTCPVKRCKEILTFANNLTCKY 122

Query:   122 CNLKVCLKHRFPADHSCKKDSLLGKNAAADAAVGKGRWNDKFLFALASRNGKECSK 177
             C +K CLKHRFP DH C K  +   N A  ++    RWN++F+ AL+ RN K C +
Sbjct:   123 CGVKFCLKHRFPTDHVCNKKII---NTAGTSS----RWNERFMEALSLRNQKGCGR 171

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0009737 "response to abscisic acid stimulus" evidence=IEP

GO:0010200 "response to chitin" evidence=IEP;RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0007165 "signal transduction" evidence=RCA

GO:0009407 "toxin catabolic process" evidence=RCA

GO:0009414 "response to water deprivation" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009733 "response to auxin stimulus" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010286 "heat acclimation" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0010583 "response to cyclopentenone" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

TAIR|locus:504955994 AT2G41835 "AT2G41835" [Arabidopsis thaliana (taxid:3702)]

 Score = 365 (133.5 bits), Expect = 1.5e-33, P = 1.5e-33
 Identities = 67/139 (48%), Positives = 82/139 (58%)

Query:     4 GTEAFPDLGSHCQHQDCHQLDFLPFKCDGCHKVFCFEHRSFKSHECPKSDIKSRKVIVCE 63
             GT  FPDLG HC    C Q+DFLPF CD C +VFC +HRS+  H CPK D +   V++C 
Sbjct:     2 GTPEFPDLGKHCSVDVCKQIDFLPFTCDRCLQVFCLDHRSYMKHSCPKGDREDVTVVICP 61

Query:    64 VCSVSIXXXXXXXXXXXXMLEKHKKSGDCDP----RKQKKPSCPVKRCKEKLTFSNTATC 119
             +C+  +              EKH  + DCDP    +  KK  CPV RCKE LTFSNT  C
Sbjct:    62 LCAKGVRLNPNEDPNITW--EKHVNT-DCDPSNYEKATKKKKCPVPRCKEYLTFSNTIKC 118

Query:   120 KTCNLKVCLKHRFPADHSC 138
             + CN+  CLKHRF  DH+C
Sbjct:   119 RDCNVDHCLKHRFGPDHTC 137

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0008270 "zinc ion binding" evidence=IEA;ISS

TAIR|locus:2103533 AT3G57480 "AT3G57480" [Arabidopsis thaliana (taxid:3702)]

 Score = 360 (131.8 bits), Expect = 5.2e-33, P = 5.2e-33
 Identities = 80/193 (41%), Positives = 104/193 (53%)

Query:     4 GTEAFPDLGSHCQHQDCHQLDFLPFKCDGCHKVFCFEHRSFKSHECPKSDIKSRKVIVCE 63
             GT  FPDLG HC    C Q+DFLPF CD C +V+C +HRS+  H+CPK +     V++C 
Sbjct:     2 GTPEFPDLGKHCSVDYCKQIDFLPFTCDRCLQVYCLDHRSYMKHDCPKGNRGDVTVVICP 61

Query:    64 VCSVSIXXXXXXXXXXXXMLEKHKKSGDCDP----RKQKKPSCPVKRCKEKLTFSNTATC 119
             +C+  +              EKH  + DCDP    +  KK  CPV RC+E LTFSNT  C
Sbjct:    62 LCAKGVRLNPDEDPNITW--EKHVNT-DCDPSNYEKAVKKKKCPVPRCRELLTFSNTIKC 118

Query:   120 KTCNLKVCLKHRFPADHSC---KKD----SLLG------KNAAADAAVGKGRWNDKFLFA 166
             + C++  CLKHRF  DHSC   KK     S +G      K A A ++    RW+  F  A
Sbjct:   119 RDCSIDHCLKHRFGPDHSCSGPKKPESSFSFMGFLSTNTKEAPASSS-SSSRWSSLFASA 177

Query:   167 LAS--RNGKECSK 177
              AS  R G + S+
Sbjct:   178 EASISRLGNDISQ 190

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0008270 "zinc ion binding" evidence=IEA;ISS

ZFIN|ZDB-GENE-040426-1596 zfand2a "zinc finger, AN1-type domain 2A" [Danio rerio (taxid:7955)]

 Score = 268 (99.4 bits), Expect = 2.9e-23, P = 2.9e-23
 Identities = 54/141 (38%), Positives = 75/141 (53%)

Query:     8 FPDLGSHCQHQDCHQLDFLPFKCDGCHKVFCFEHRSFKSHECPKSDIKSRKVIVCEVCSV 67
             FPDLG HC  + C +LDFLP KCD C ++FC +H ++ +H+C  S  K  +V VC +C++
Sbjct:     3 FPDLGEHCSEKSCKRLDFLPMKCDACEEIFCKDHITYANHKCTSSYKKDVQVPVCPLCNI 62

Query:    68 SIXXXXXXXXXXXXMLEKHKKSGDC--DPRKQKKP----SCPVKRCKEKLTFSNTATCKT 121
              I             + +H    DC  DP ++K+      C    CK+K       TC  
Sbjct:    63 PIPIRRGEMPDIK--VGEHIDR-DCKSDPAQRKRKIFTNKCSKGGCKQKEMIR--VTCDQ 117

Query:   122 CNLKVCLKHRFPADHSCKKDS 142
             C+L  CLKHR P DH CK D+
Sbjct:   118 CHLNYCLKHRHPLDHDCKTDN 138

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0046872 "metal ion binding" evidence=IEA

FB|FBgn0031535 CG12795 [Drosophila melanogaster (taxid:7227)]

 Score = 243 (90.6 bits), Expect = 1.3e-20, P = 1.3e-20
 Identities = 50/134 (37%), Positives = 65/134 (48%)

Query:     8 FPDLGSHCQHQDCHQLDFLPFKCDGCHKVFCFEHRSFKSHECPKSDIKSRKVIVCEVCSV 67
             FP LG HC    C++LDFLP KCD C KVFC  H S+  H CP +  K+ +V VC +C  
Sbjct:     3 FPHLGQHCSEATCNRLDFLPVKCDSCDKVFCASHYSYDRHSCPGAYKKNVQVPVCPLCRE 62

Query:    68 SIXX--XXXXXXXXXXMLEKHKKSGDCDPRKQKKPSCPVKRCKEKLTFSNTATCKTCNLK 125
              +               +++  KS   + +K     C  K CK K       TC  C L 
Sbjct:    63 PVPTPPGVEPDVTVGQHIDQQCKS---ESKKIYTNRCNAKGCKRKELIP--VTCSQCRLN 117

Query:   126 VCLKHRFPADHSCK 139
              CL+HR  +DH CK
Sbjct:   118 FCLRHRHTSDHDCK 131

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|B4DEN4 ZFAND2B "cDNA FLJ60439, highly similar to AN1-type zinc finger protein 2B" [Homo sapiens (taxid:9606)]

 Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
 Identities = 48/137 (35%), Positives = 69/137 (50%)

Query:     8 FPDLGSHCQHQDCHQLDFLPFKCDGCHKVFCFEHRSFKSHECPKSDIKSRKVIVCEVCSV 67
             FPDLG+HC    C +LDFLP KCD C  +FC +H ++  H C  +  K  +V VC +C+V
Sbjct:     3 FPDLGAHCSEPSCQRLDFLPLKCDACSGIFCADHVAYAQHHCGSAYQKDIQVPVCPLCNV 62

Query:    68 SIXXXXXXXXXXXXMLEKHKKSGDC--DPRKQKKP----SCPVKRCKEKLTFSNTATCKT 121
              +             + +H    DC  DP +QK+      C    C+++       TC+ 
Sbjct:    63 PVPVARGEPPDRA--VGEHIDR-DCRSDPAQQKRKIFTNKCERAGCRQREMMK--LTCER 117

Query:   122 CNLKVCLKHRFPADHSC 138
             C+   C+KHR P DH C
Sbjct:   118 CSRNFCIKHRHPLDHDC 134

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|B8ZZ56 ZFAND2B "AN1-type zinc finger protein 2B" [Homo sapiens (taxid:9606)]

 Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
 Identities = 48/137 (35%), Positives = 69/137 (50%)

Query:     8 FPDLGSHCQHQDCHQLDFLPFKCDGCHKVFCFEHRSFKSHECPKSDIKSRKVIVCEVCSV 67
             FPDLG+HC    C +LDFLP KCD C  +FC +H ++  H C  +  K  +V VC +C+V
Sbjct:     3 FPDLGAHCSEPSCQRLDFLPLKCDACSGIFCADHVAYAQHHCGSAYQKDIQVPVCPLCNV 62

Query:    68 SIXXXXXXXXXXXXMLEKHKKSGDC--DPRKQKKP----SCPVKRCKEKLTFSNTATCKT 121
              +             + +H    DC  DP +QK+      C    C+++       TC+ 
Sbjct:    63 PVPVARGEPPDRA--VGEHIDR-DCRSDPAQQKRKIFTNKCERAGCRQREMMK--LTCER 117

Query:   122 CNLKVCLKHRFPADHSC 138
             C+   C+KHR P DH C
Sbjct:   118 CSRNFCIKHRHPLDHDC 134

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|E7EV05 ZFAND2B "AN1-type zinc finger protein 2B" [Homo sapiens (taxid:9606)]

 Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
 Identities = 48/137 (35%), Positives = 69/137 (50%)

Query:     8 FPDLGSHCQHQDCHQLDFLPFKCDGCHKVFCFEHRSFKSHECPKSDIKSRKVIVCEVCSV 67
             FPDLG+HC    C +LDFLP KCD C  +FC +H ++  H C  +  K  +V VC +C+V
Sbjct:     3 FPDLGAHCSEPSCQRLDFLPLKCDACSGIFCADHVAYAQHHCGSAYQKDIQVPVCPLCNV 62

Query:    68 SIXXXXXXXXXXXXMLEKHKKSGDC--DPRKQKKP----SCPVKRCKEKLTFSNTATCKT 121
              +             + +H    DC  DP +QK+      C    C+++       TC+ 
Sbjct:    63 PVPVARGEPPDRA--VGEHIDR-DCRSDPAQQKRKIFTNKCERAGCRQREMMK--LTCER 117

Query:   122 CNLKVCLKHRFPADHSC 138
             C+   C+KHR P DH C
Sbjct:   118 CSRNFCIKHRHPLDHDC 134

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|E9PFU9 ZFAND2B "AN1-type zinc finger protein 2B" [Homo sapiens (taxid:9606)]

 Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
 Identities = 48/137 (35%), Positives = 69/137 (50%)

Query:     8 FPDLGSHCQHQDCHQLDFLPFKCDGCHKVFCFEHRSFKSHECPKSDIKSRKVIVCEVCSV 67
             FPDLG+HC    C +LDFLP KCD C  +FC +H ++  H C  +  K  +V VC +C+V
Sbjct:     3 FPDLGAHCSEPSCQRLDFLPLKCDACSGIFCADHVAYAQHHCGSAYQKDIQVPVCPLCNV 62

Query:    68 SIXXXXXXXXXXXXMLEKHKKSGDC--DPRKQKKP----SCPVKRCKEKLTFSNTATCKT 121
              +             + +H    DC  DP +QK+      C    C+++       TC+ 
Sbjct:    63 PVPVARGEPPDRA--VGEHIDR-DCRSDPAQQKRKIFTNKCERAGCRQREMMK--LTCER 117

Query:   122 CNLKVCLKHRFPADHSC 138
             C+   C+KHR P DH C
Sbjct:   118 CSRNFCIKHRHPLDHDC 134

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|Q8WV99 ZFAND2B "AN1-type zinc finger protein 2B" [Homo sapiens (taxid:9606)]

 Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
 Identities = 48/137 (35%), Positives = 69/137 (50%)

Query:     8 FPDLGSHCQHQDCHQLDFLPFKCDGCHKVFCFEHRSFKSHECPKSDIKSRKVIVCEVCSV 67
             FPDLG+HC    C +LDFLP KCD C  +FC +H ++  H C  +  K  +V VC +C+V
Sbjct:     3 FPDLGAHCSEPSCQRLDFLPLKCDACSGIFCADHVAYAQHHCGSAYQKDIQVPVCPLCNV 62

Query:    68 SIXXXXXXXXXXXXMLEKHKKSGDC--DPRKQKKP----SCPVKRCKEKLTFSNTATCKT 121
              +             + +H    DC  DP +QK+      C    C+++       TC+ 
Sbjct:    63 PVPVARGEPPDRA--VGEHIDR-DCRSDPAQQKRKIFTNKCERAGCRQREMMK--LTCER 117

Query:   122 CNLKVCLKHRFPADHSC 138
             C+   C+KHR P DH C
Sbjct:   118 CSRNFCIKHRHPLDHDC 134

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q67YE6	SAP12_ARATH	No assigned EC number	0.6264	0.8697	0.8978	yes	no
Q6H595	SAP17_ORYSJ	No assigned EC number	0.5820	0.6927	0.7074	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00020809001 SubName- Full=Chromosome chr14 scaffold_21, whole genome shotgun sequence; (189 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	192
pfam01428	43	pfam01428, zf-AN1, AN1-like Zinc finger	4e-09
pfam01428	43	pfam01428, zf-AN1, AN1-like Zinc finger	3e-05

>gnl|CDD|201791 pfam01428, zf-AN1, AN1-like Zinc finger

 Score = 50.1 bits (120), Expect = 4e-09
 Identities = 17/37 (45%), Positives = 21/37 (56%)

Query: 15 CQHQDCHQLDFLPFKCDGCHKVFCFEHRSFKSHECPK 51
          C  + C + DFLPFKC  C   FC +HR  + H CP 
Sbjct: 1  CSFKGCKKKDFLPFKCRFCGGTFCLKHRLPEDHNCPG 37

Zinc finger at the C-terminus of An1, a ubiquitin-like protein in Xenopus laevis. The following pattern describes the zinc finger. C-X2-C-X(9-12)-C-X(1-2)-C-X4-C-X2-H-X5-H-X-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Length = 43

>gnl|CDD|201791 pfam01428, zf-AN1, AN1-like Zinc finger

 Score = 39.7 bits (93), Expect = 3e-05
 Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 2/40 (5%)

Query: 102 CPVKRCKEKLTFSNTATCKTCNLKVCLKHRFPADHSCKKD 141
           C  K CK+K        C+ C    CLKHR P DH+C   
Sbjct: 1   CSFKGCKKKDF--LPFKCRFCGGTFCLKHRLPEDHNCPGL 38

Zinc finger at the C-terminus of An1, a ubiquitin-like protein in Xenopus laevis. The following pattern describes the zinc finger. C-X2-C-X(9-12)-C-X(1-2)-C-X4-C-X2-H-X5-H-X-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Length = 43

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	192
KOG3183	250	consensus Predicted Zn-finger protein [General fun	100.0
PF01428	43	zf-AN1: AN1-like Zinc finger; InterPro: IPR000058	99.29
PF01428	43	zf-AN1: AN1-like Zinc finger; InterPro: IPR000058	99.2
smart00154	39	ZnF_AN1 AN1-like Zinc finger. Zinc finger at the C	99.17
smart00154	39	ZnF_AN1 AN1-like Zinc finger. Zinc finger at the C	98.88
KOG3183	250	consensus Predicted Zn-finger protein [General fun	98.1
COG3582	162	Predicted nucleic acid binding protein containing	97.7
KOG3173	167	consensus Predicted Zn-finger protein [General fun	96.9
COG3582	162	Predicted nucleic acid binding protein containing	95.07
KOG3173	167	consensus Predicted Zn-finger protein [General fun	94.24
PF04236	63	Transp_Tc5_C: Tc5 transposase C-terminal domain; I	91.6
PF04236	63	Transp_Tc5_C: Tc5 transposase C-terminal domain; I	84.23

>KOG3183 consensus Predicted Zn-finger protein [General function prediction only]

Probab=100.00  E-value=3e-43  Score=301.70  Aligned_cols=177  Identities=43%  Similarity=0.804  Sum_probs=155.2

Q ss_pred             ccCCCccCcCCCcCCCCCcccccccCCcccccccCCCCcCCCcCCCCCccCCcccccccccCcccccCCCCCCChhHHHH
Q 029499            5 TEAFPDLGSHCQHQDCHQLDFLPFKCDGCHKVFCFEHRSFKSHECPKSDIKSRKVIVCEVCSVSIETTGEFGEGEKTMLE   84 (192)
Q Consensus         5 ~~ef~diG~hC~~~~C~qlDFLPf~C~~C~~~FC~eHr~~~~H~C~~~~~~~~~v~~CPlC~~~v~~~~~~g~~~n~~v~   84 (192)
                      ||||||||+||++++|+|||||||+|+.|+..||+|||+|++|.||.....+++|++||+|+++|+..  .++.++.+|+
T Consensus         1 ~~efpDlGkHCs~~~CkqlDFLPf~Cd~C~~~FC~eHrsye~H~Cp~~~~~~~~v~icp~cs~pv~~~--~de~~~~~v~   78 (250)
T KOG3183|consen    1 TMEFPDLGKHCSVPYCKQLDFLPFKCDGCSGIFCLEHRSYESHHCPKGLRIDVQVPICPLCSKPVPTK--KDEAPDKVVE   78 (250)
T ss_pred             CCcccccccccCcchhhhccccceeeCCccchhhhccchHhhcCCCcccccceeecccCCCCCCCCCC--CCcchhhhhc
Confidence            69999999999999999999999999999999999999999999999999999999999999999985  8999999999


Q ss_pred             hhcccCCCCcC------CCCCCCCCcCcccccccccCcccccccCccccccCcCCCCCCCC-CCCCCCccccccccccCC
Q 029499           85 KHKKSGDCDPR------KQKKPSCPVKRCKEKLTFSNTATCKTCNLKVCLKHRFPADHSCK-KDSLLGKNAAADAAVGKG  157 (192)
Q Consensus        85 ~Hi~s~~C~p~------kk~~~~Cs~~~Ck~~~~~~n~~~C~~C~~~FClkHR~p~dH~C~-~~~~~~~~~~~~~a~~~~  157 (192)
                      .|+ +++|++-      +..+++|+..+|++.+.++|.|+|.+|+.+||++||++.||.|. .+...+..++........
T Consensus        79 ~h~-~~dC~~~~~~~~~k~~t~kc~~~~c~k~~~~~~~~~c~~c~~~~c~khr~~~dhsc~~~~~~~k~~a~~~~~~~~q  157 (250)
T KOG3183|consen   79 PHI-SNDCDRHPEQKKRKVFTNKCPVPRCKKTLTLANKITCSKCGRNFCLKHRHPLDHSCNKQLGNLKKKAGGDKIGPMQ  157 (250)
T ss_pred             hhh-ccccccCchhhhcccccccCCchhhHHHHHHHHhhhhHhhcchhhhhccCCCCchhhhhccCcccccccccccccc
Confidence            996 6899872      22457899999999998888999999999999999999999999 454555555555544578


Q ss_pred             chHHHHHHHHhhhc-CCcccCCCCCCCC
Q 029499          158 RWNDKFLFALASRN-GKECSKCDRGSSS  184 (192)
Q Consensus       158 ~~~~~f~s~l~~r~-~~~~~~~~~~~~~  184 (192)
                      +|...+..+.+++. ++.|...+|++..
T Consensus       158 ~~~~~~~~~~~s~~~~~~~t~~~~~~~k  185 (250)
T KOG3183|consen  158 NRIYIWTYLSSSSETAKECTRMARYIGK  185 (250)
T ss_pred             ceeeeeEeecCcccccccccccchhhcc
Confidence            88888888888886 6899888875443

>PF01428 zf-AN1: AN1-like Zinc finger; InterPro: IPR000058 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=99.29  E-value=1.3e-12  Score=85.35  Aligned_cols=41  Identities=46%  Similarity=1.052  Sum_probs=31.7

Q ss_pred             CCcCCCCCcccccccCCcccccccCCCCcCCCcCCCCCccC
Q 029499           15 CQHQDCHQLDFLPFKCDGCHKVFCFEHRSFKSHECPKSDIK   55 (192)
Q Consensus        15 C~~~~C~qlDFLPf~C~~C~~~FC~eHr~~~~H~C~~~~~~   55 (192)
                      |++++|+++|||||+|++|++.||.+||.+++|+|+....+
T Consensus         1 C~~~~C~~~~~~~~~C~~C~~~FC~~Hr~~e~H~C~~~~~~   41 (43)
T PF01428_consen    1 CSFPGCKKKDFLPFKCKHCGKSFCLKHRLPEDHNCSKLQKK   41 (43)
T ss_dssp             -SSTTT--BCTSHEE-TTTS-EE-TTTHSTTTCT-SSTTSC
T ss_pred             CccCcCcCccCCCeECCCCCcccCccccCccccCCcchhhc
Confidence            78889999999999999999999999999999999987654

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents the AN1-type zinc finger domain, which has a dimetal (zinc)-bound alpha/beta fold. This domain was first identified as a zinc finger at the C terminus of AN1 Q91889 from SWISSPROT, a ubiquitin-like protein in Xenopus laevis []. The AN1-type zinc finger contains six conserved cysteines and two histidines that could potentially coordinate 2 zinc atoms. Certain stress-associated proteins (SAP) contain AN1 domain, often in combination with A20 zinc finger domains (SAP8) or C2H2 domains (SAP16) []. For example, the human protein Znf216 has an A20 zinc-finger at the N terminus and an AN1 zinc-finger at the C terminus, acting to negatively regulate the NFkappaB activation pathway and to interact with components of the immune response like RIP, IKKgamma and TRAF6. The interact of Znf216 with IKK-gamma and RIP is mediated by the A20 zinc-finger domain, while its interaction with TRAF6 is mediated by the AN1 zinc-finger domain; therefore, both zinc-finger domains are involved in regulating the immune response []. The AN1 zinc finger domain is also found in proteins containing a ubiquitin-like domain, which are involved in the ubiquitination pathway []. Proteins containing an AN1-type zinc finger include: Ascidian posterior end mark 6 (pem-6) protein []. Human AWP1 protein (associated with PRK1), which is expressed during early embryogenesis []. Human immunoglobulin mu binding protein 2 (SMUBP-2), mutations in which cause muscular atrophy with respiratory distress type 1 []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding; PDB: 1WFP_A 1WYS_A 1WG2_A 1WFH_A 1X4W_A 1WFE_A 1WFL_A 1X4V_A.

>PF01428 zf-AN1: AN1-like Zinc finger; InterPro: IPR000058 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=99.20  E-value=6e-12  Score=82.24  Aligned_cols=41  Identities=41%  Similarity=0.853  Sum_probs=30.3

Q ss_pred             CCcCcccccccccCcccccccCccccccCcCCCCCCCCCCCCC
Q 029499          102 CPVKRCKEKLTFSNTATCKTCNLKVCLKHRFPADHSCKKDSLL  144 (192)
Q Consensus       102 Cs~~~Ck~~~~~~n~~~C~~C~~~FClkHR~p~dH~C~~~~~~  144 (192)
                      |++.+|++++++  ++.|+.|++.||++||+|++|.|..+...
T Consensus         1 C~~~~C~~~~~~--~~~C~~C~~~FC~~Hr~~e~H~C~~~~~~   41 (43)
T PF01428_consen    1 CSFPGCKKKDFL--PFKCKHCGKSFCLKHRLPEDHNCSKLQKK   41 (43)
T ss_dssp             -SSTTT--BCTS--HEE-TTTS-EE-TTTHSTTTCT-SSTTSC
T ss_pred             CccCcCcCccCC--CeECCCCCcccCccccCccccCCcchhhc
Confidence            788999999875  99999999999999999999999987543

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents the AN1-type zinc finger domain, which has a dimetal (zinc)-bound alpha/beta fold. This domain was first identified as a zinc finger at the C terminus of AN1 Q91889 from SWISSPROT, a ubiquitin-like protein in Xenopus laevis []. The AN1-type zinc finger contains six conserved cysteines and two histidines that could potentially coordinate 2 zinc atoms. Certain stress-associated proteins (SAP) contain AN1 domain, often in combination with A20 zinc finger domains (SAP8) or C2H2 domains (SAP16) []. For example, the human protein Znf216 has an A20 zinc-finger at the N terminus and an AN1 zinc-finger at the C terminus, acting to negatively regulate the NFkappaB activation pathway and to interact with components of the immune response like RIP, IKKgamma and TRAF6. The interact of Znf216 with IKK-gamma and RIP is mediated by the A20 zinc-finger domain, while its interaction with TRAF6 is mediated by the AN1 zinc-finger domain; therefore, both zinc-finger domains are involved in regulating the immune response []. The AN1 zinc finger domain is also found in proteins containing a ubiquitin-like domain, which are involved in the ubiquitination pathway []. Proteins containing an AN1-type zinc finger include: Ascidian posterior end mark 6 (pem-6) protein []. Human AWP1 protein (associated with PRK1), which is expressed during early embryogenesis []. Human immunoglobulin mu binding protein 2 (SMUBP-2), mutations in which cause muscular atrophy with respiratory distress type 1 []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding; PDB: 1WFP_A 1WYS_A 1WG2_A 1WFH_A 1X4W_A 1WFE_A 1WFL_A 1X4V_A.

>smart00154 ZnF_AN1 AN1-like Zinc finger

Probab=99.17  E-value=1.4e-11  Score=79.40  Aligned_cols=34  Identities=41%  Similarity=0.829  Sum_probs=32.6

Q ss_pred             CCCCcccc-cccCCcccccccCCCCcCCCcCCCCC
Q 029499           19 DCHQLDFL-PFKCDGCHKVFCFEHRSFKSHECPKS   52 (192)
Q Consensus        19 ~C~qlDFL-Pf~C~~C~~~FC~eHr~~~~H~C~~~   52 (192)
                      .|+++||| ||+|++|+++||.+||.+++|+|+..
T Consensus         3 ~C~~~~~l~~f~C~~C~~~FC~~HR~~e~H~C~~~   37 (39)
T smart00154        3 FCRKKVGLTGFKCRHCGNLFCGEHRLPEDHDCPGD   37 (39)
T ss_pred             ccCCcccccCeECCccCCccccccCCccccCCccc
Confidence            69999999 99999999999999999999999875

Zinc finger at the C-terminus of An1, a ubiquitin-like protein in Xenopus laevis.

>smart00154 ZnF_AN1 AN1-like Zinc finger

Probab=98.88  E-value=1e-09  Score=70.72  Aligned_cols=37  Identities=35%  Similarity=0.946  Sum_probs=32.0

Q ss_pred             CCcCcccccccccCcccccccCccccccCcCCCCCCCCCC
Q 029499          102 CPVKRCKEKLTFSNTATCKTCNLKVCLKHRFPADHSCKKD  141 (192)
Q Consensus       102 Cs~~~Ck~~~~~~n~~~C~~C~~~FClkHR~p~dH~C~~~  141 (192)
                      |.+  |+++++++ +++|+.|++.||++||++++|.|..+
T Consensus         1 C~~--C~~~~~l~-~f~C~~C~~~FC~~HR~~e~H~C~~~   37 (39)
T smart00154        1 CHF--CRKKVGLT-GFKCRHCGNLFCGEHRLPEDHDCPGD   37 (39)
T ss_pred             Ccc--cCCccccc-CeECCccCCccccccCCccccCCccc
Confidence            445  88887664 89999999999999999999999865

Zinc finger at the C-terminus of An1, a ubiquitin-like protein in Xenopus laevis.

>KOG3183 consensus Predicted Zn-finger protein [General function prediction only]

Probab=98.10  E-value=1.2e-06  Score=76.32  Aligned_cols=75  Identities=20%  Similarity=0.363  Sum_probs=57.6

Q ss_pred             CCCCcCcccccccccCcccccccCccccccCcCCCCCCCCCCCCCCccc----cccccccCCchHHHHHHHHhhhcCCcc
Q 029499          100 PSCPVKRCKEKLTFSNTATCKTCNLKVCLKHRFPADHSCKKDSLLGKNA----AADAAVGKGRWNDKFLFALASRNGKEC  175 (192)
Q Consensus       100 ~~Cs~~~Ck~~~~~~n~~~C~~C~~~FClkHR~p~dH~C~~~~~~~~~~----~~~~a~~~~~~~~~f~s~l~~r~~~~~  175 (192)
                      .+|+...|++++++  ||+|..|++.||+.||.-++|+|.....-..+.    .-..++...+.+++++.+.+. ..++|
T Consensus         9 kHCs~~~CkqlDFL--Pf~Cd~C~~~FC~eHrsye~H~Cp~~~~~~~~v~icp~cs~pv~~~~de~~~~~v~~h-~~~dC   85 (250)
T KOG3183|consen    9 KHCSVPYCKQLDFL--PFKCDGCSGIFCLEHRSYESHHCPKGLRIDVQVPICPLCSKPVPTKKDEAPDKVVEPH-ISNDC   85 (250)
T ss_pred             cccCcchhhhcccc--ceeeCCccchhhhccchHhhcCCCcccccceeecccCCCCCCCCCCCCcchhhhhchh-hcccc
Confidence            47998899999998  999999999999999999999999874322111    011112344778999999999 58899


Q ss_pred             cC
Q 029499          176 SK  177 (192)
Q Consensus       176 ~~  177 (192)
                      -.
T Consensus        86 ~~   87 (250)
T KOG3183|consen   86 DR   87 (250)
T ss_pred             cc
Confidence            44

>COG3582 Predicted nucleic acid binding protein containing the AN1-type Zn-finger [General function prediction only]

Probab=97.70  E-value=3.7e-05  Score=63.67  Aligned_cols=113  Identities=19%  Similarity=0.286  Sum_probs=66.1

Q ss_pred             CCCCcccccccCCcccccccCCCCcCCCcCCCCCc----------cCCcccccc-cccCcccccCCCCCCChhHHHHhhc
Q 029499           19 DCHQLDFLPFKCDGCHKVFCFEHRSFKSHECPKSD----------IKSRKVIVC-EVCSVSIETTGEFGEGEKTMLEKHK   87 (192)
Q Consensus        19 ~C~qlDFLPf~C~~C~~~FC~eHr~~~~H~C~~~~----------~~~~~v~~C-PlC~~~v~~~~~~g~~~n~~v~~Hi   87 (192)
                      .+....=||++|+.+.++|+.+|+..-.|.++-..          ....++..| |+=...|..           ++.+-
T Consensus         5 s~~~~~~lP~r~~~~~kv~s~~~~~~~~~~f~~~i~~~~r~~i~k~~~~~~~~~~p~i~~~~~~-----------~~~~~   73 (162)
T COG3582           5 SRVSETRLPSRGNITAKVSSTDNSLTLFSPFKLFIQLCDRKKIKKPDPGQAMKCLPLISSAVSN-----------PSNTD   73 (162)
T ss_pred             ccceeccCCccccceeeeccCccccccccccchhhhhhhhhccccCCCcchhhhcceEEEEeec-----------ccccc
Confidence            34455669999999999999999998889888641          011122211 110000100           00110


Q ss_pred             c---cCCCC---cCCCCCC---CCCcCcc-cccccccCcccccccCccccccCcCCCCCCCCCCCCC
Q 029499           88 K---SGDCD---PRKQKKP---SCPVKRC-KEKLTFSNTATCKTCNLKVCLKHRFPADHSCKKDSLL  144 (192)
Q Consensus        88 ~---s~~C~---p~kk~~~---~Cs~~~C-k~~~~~~n~~~C~~C~~~FClkHR~p~dH~C~~~~~~  144 (192)
                      .   +..=.   +....+.   .|....| .+...+  +..|++|+..||..||+++.|+|..+...
T Consensus        74 ~~k~s~~~~~~~~~~~~~~~t~~~a~~~~~g~~s~l--~~~c~~c~g~fc~~h~lp~nhdc~~L~s~  138 (162)
T COG3582          74 TPKRSTRVPLNGPFDSGKGITDRCATPQCTGKGSTL--AGKCNYCTGYFCAEHRLPENHDCNGLGSL  138 (162)
T ss_pred             CcccccccccccccccccccceeeecceeccCCccc--cccccCCCCcceeceecccccccccHHHh
Confidence            0   00000   0111222   4555444 344555  78999999999999999999999987543

>KOG3173 consensus Predicted Zn-finger protein [General function prediction only]

Probab=96.90  E-value=0.00049  Score=57.09  Aligned_cols=41  Identities=34%  Similarity=0.845  Sum_probs=33.6

Q ss_pred             CCCCCCCcCcccccccccCcccccccCccccccCcCCCCCCCCCC
Q 029499           97 QKKPSCPVKRCKEKLTFSNTATCKTCNLKVCLKHRFPADHSCKKD  141 (192)
Q Consensus        97 k~~~~Cs~~~Ck~~~~~~n~~~C~~C~~~FClkHR~p~dH~C~~~  141 (192)
                      +++.+|-.  |++.+.+. .+.| .|+..||..|||++.|+|.-.
T Consensus       103 ~~~~rC~~--C~kk~glt-gf~C-rCG~~fC~~HRy~e~H~C~fD  143 (167)
T KOG3173|consen  103 KKKKRCFK--CRKKVGLT-GFKC-RCGNTFCGTHRYPEQHDCSFD  143 (167)
T ss_pred             ccchhhhh--hhhhhccc-cccc-ccCCcccccccCCcccccccc
Confidence            44567888  88766654 5899 999999999999999999743

>COG3582 Predicted nucleic acid binding protein containing the AN1-type Zn-finger [General function prediction only]

Probab=95.07  E-value=0.01  Score=49.27  Aligned_cols=37  Identities=30%  Similarity=0.454  Sum_probs=34.1

Q ss_pred             CCCCcccccccCCcccccccCCCCcCCCcCCCCCccC
Q 029499           19 DCHQLDFLPFKCDGCHKVFCFEHRSFKSHECPKSDIK   55 (192)
Q Consensus        19 ~C~qlDFLPf~C~~C~~~FC~eHr~~~~H~C~~~~~~   55 (192)
                      .|+.---||++|++|+.+||.+|+.++.|.|..+.++
T Consensus       102 ~~g~~s~l~~~c~~c~g~fc~~h~lp~nhdc~~L~s~  138 (162)
T COG3582         102 CTGKGSTLAGKCNYCTGYFCAEHRLPENHDCNGLGSL  138 (162)
T ss_pred             eccCCccccccccCCCCcceeceecccccccccHHHh
Confidence            6777889999999999999999999999999998764

>KOG3173 consensus Predicted Zn-finger protein [General function prediction only]

Probab=94.24  E-value=0.024  Score=47.08  Aligned_cols=38  Identities=29%  Similarity=0.679  Sum_probs=30.2

Q ss_pred             CCCcCCCCCcccccccCCcccccccCCCCcCCCcCCCCCc
Q 029499           14 HCQHQDCHQLDFLPFKCDGCHKVFCFEHRSFKSHECPKSD   53 (192)
Q Consensus        14 hC~~~~C~qlDFLPf~C~~C~~~FC~eHr~~~~H~C~~~~   53 (192)
                      +|..-. .++..+.|.|. |+.+||..||.++.|.|.-..
T Consensus       107 rC~~C~-kk~gltgf~Cr-CG~~fC~~HRy~e~H~C~fDy  144 (167)
T KOG3173|consen  107 RCFKCR-KKVGLTGFKCR-CGNTFCGTHRYPEQHDCSFDY  144 (167)
T ss_pred             hhhhhh-hhhcccccccc-cCCcccccccCCccccccccH
Confidence            355222 45677899996 999999999999999998544

>PF04236 Transp_Tc5_C: Tc5 transposase C-terminal domain; InterPro: IPR007350 This domain corresponds to a C-terminal cysteine rich region that probably binds to a metal ion and could be DNA-binding

Probab=91.60  E-value=0.14  Score=36.34  Aligned_cols=39  Identities=28%  Similarity=0.823  Sum_probs=33.1

Q ss_pred             CccCcCCCcCCCCCcccccccCCcccccccCCCCcC-CCcCC
Q 029499            9 PDLGSHCQHQDCHQLDFLPFKCDGCHKVFCFEHRSF-KSHEC   49 (192)
Q Consensus         9 ~diG~hC~~~~C~qlDFLPf~C~~C~~~FC~eHr~~-~~H~C   49 (192)
                      .+....|..+.|+.+-|  ++|.+|++.+|-+|+.. +-|.|
T Consensus        24 ~~~~~~C~~~gC~~~s~--I~C~~Ckk~~Cf~Hfiv~~~H~C   63 (63)
T PF04236_consen   24 KNVAGDCDITGCNNTSF--IRCAYCKKSLCFNHFIVSEYHLC   63 (63)
T ss_pred             CCCcCcCCCCCCCCcCE--EEccccCCcccccceeeeeeEcC
Confidence            35567899999999988  48999999999999986 67776

It is found in association with the DDE superfamily (IPR004875 from INTERPRO) and the Tc5 transposase family (IPR004906 from INTERPRO). More information about these proteins can be found at Protein of the Month: Transposase [].

>PF04236 Transp_Tc5_C: Tc5 transposase C-terminal domain; InterPro: IPR007350 This domain corresponds to a C-terminal cysteine rich region that probably binds to a metal ion and could be DNA-binding

Probab=84.23  E-value=0.66  Score=32.87  Aligned_cols=36  Identities=22%  Similarity=0.646  Sum_probs=29.8

Q ss_pred             CCCCCcCcccccccccCcccccccCccccccCcCC-CCCCC
Q 029499           99 KPSCPVKRCKEKLTFSNTATCKTCNLKVCLKHRFP-ADHSC  138 (192)
Q Consensus        99 ~~~Cs~~~Ck~~~~~~n~~~C~~C~~~FClkHR~p-~dH~C  138 (192)
                      +..|...+|.+..+    +.|.+|++.+|.+|=+- +-|.|
T Consensus        27 ~~~C~~~gC~~~s~----I~C~~Ckk~~Cf~Hfiv~~~H~C   63 (63)
T PF04236_consen   27 AGDCDITGCNNTSF----IRCAYCKKSLCFNHFIVSEYHLC   63 (63)
T ss_pred             cCcCCCCCCCCcCE----EEccccCCcccccceeeeeeEcC
Confidence            45799999999864    58999999999999984 55665

It is found in association with the DDE superfamily (IPR004875 from INTERPRO) and the Tc5 transposase family (IPR004906 from INTERPRO). More information about these proteins can be found at Protein of the Month: Transposase [].

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	192
1wys_A	75	Solution Structure Of The First Zf-An1 Domain Of Mo		6e-10

>pdb|1WYS|A Chain A, Solution Structure Of The First Zf-An1 Domain Of Mouse Riken Cdna 2310008m20 Protein Length = 75

Iteration: 1
 Score = 60.5 bits (145), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 26/45 (57%), Positives = 31/45 (68%)
Query: 10 DLGSHCQHQDCHQLDFLPFKCDGCHKVFCFEHRSFKSHECPKSDI 54
          D+G HCQ Q C Q DFLPF CDGC  +FC EHRS  SH C + ++
Sbjct: 12 DIGQHCQVQHCRQRDFLPFVCDGCSGIFCLEHRSKDSHGCSEVNV 56

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	192
1wys_A	75	Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc	1e-19
1wfe_A	86	Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc	5e-07
1wfe_A	86	Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc	7e-06
1x4v_A	63	Hypothetical protein LOC130617; ZF-AN1 domain, zin	8e-07
1x4v_A	63	Hypothetical protein LOC130617; ZF-AN1 domain, zin	2e-04

>1wys_A Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc binding, NPPSFA, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} Length = 75

 Score = 78.1 bits (192), Expect = 1e-19
 Identities = 32/72 (44%), Positives = 40/72 (55%)

Query: 2  GGGTEAFPDLGSHCQHQDCHQLDFLPFKCDGCHKVFCFEHRSFKSHECPKSDIKSRKVIV 61
          G    A  D+G HCQ Q C Q DFLPF CDGC  +FC EHRS  SH C + ++   +   
Sbjct: 4  GSSGMAELDIGQHCQVQHCRQRDFLPFVCDGCSGIFCLEHRSKDSHGCSEVNVVKERPKT 63

Query: 62 CEVCSVSIETTG 73
           E  S S  ++G
Sbjct: 64 DEHKSYSGPSSG 75

>1wfe_A Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1 Length = 86

 Score = 45.2 bits (106), Expect = 5e-07
 Identities = 12/45 (26%), Positives = 20/45 (44%)

Query: 14 HCQHQDCHQLDFLPFKCDGCHKVFCFEHRSFKSHECPKSDIKSRK 58
           C  + C  ++ +   C  C K FC  HR    H+C K ++   +
Sbjct: 27 SCSFKGCTDVELVAVICPYCEKNFCLRHRHQSDHDCEKLEVAKPR 71

>1wfe_A Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1 Length = 86

 Score = 42.1 bits (98), Expect = 7e-06
 Identities = 18/71 (25%), Positives = 27/71 (38%), Gaps = 2/71 (2%)

Query: 84  EKHKKSGDCDPRKQKKPSCPVKRCKEKLTFSNTATCKTCNLKVCLKHRFPADHSCKKDSL 143
           E +         + K  SC  K C +    +    C  C    CL+HR  +DH C+K  +
Sbjct: 10  EVNVVKERPKTDEHKSYSCSFKGCTDVELVAVI--CPYCEKNFCLRHRHQSDHDCEKLEV 67

Query: 144 LGKNAAADAAV 154
                AA   +
Sbjct: 68  AKPRMAATQKL 78

>1x4v_A Hypothetical protein LOC130617; ZF-AN1 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 63

 Score = 43.9 bits (103), Expect = 8e-07
 Identities = 11/39 (28%), Positives = 18/39 (46%)

Query: 15 CQHQDCHQLDFLPFKCDGCHKVFCFEHRSFKSHECPKSD 53
          C+   C Q + +   C+ C + FC +HR    H+C    
Sbjct: 15 CERAGCRQREMMKLTCERCSRNFCIKHRHPLDHDCSGEG 53

>1x4v_A Hypothetical protein LOC130617; ZF-AN1 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 63

 Score = 37.3 bits (86), Expect = 2e-04
 Identities = 15/60 (25%), Positives = 24/60 (40%), Gaps = 2/60 (3%)

Query: 93  DPRKQKKPSCPVKRCKEKLTFSNTATCKTCNLKVCLKHRFPADHSCKKDSLLGKNAAADA 152
             RK     C    C+++     T  C+ C+   C+KHR P DH C  +     +  +  
Sbjct: 6   SGRKIFTNKCERAGCRQREMMKLT--CERCSRNFCIKHRHPLDHDCSGEGHPTSSGPSSG 63

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	192
1wys_A	75	Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc	99.76
1wfe_A	86	Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc	99.46
1x4v_A	63	Hypothetical protein LOC130617; ZF-AN1 domain, zin	99.37
1x4v_A	63	Hypothetical protein LOC130617; ZF-AN1 domain, zin	99.36
1wys_A	75	Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc	99.19
1wfe_A	86	Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc	99.17
1wg2_A	64	Zinc finger (AN1-like) family protein; riken struc	98.96
1wfh_A	64	Zinc finger (AN1-like) family protein; ZF-AN1 doma	98.95
1wfp_A	74	Zinc finger (AN1-like) family protein; ZF-AN1 doma	98.91
1wff_A	85	Riken cDNA 2810002D23 protein; ZF-AN1 domain, zinc	98.85
1wfl_A	74	Zinc finger protein 216; ZF-AN1 domain, zinc bindi	98.85
1x4w_A	67	Hypothetical protein FLJ13222; ZF-AN1 domain, zinc	98.82
1wg2_A	64	Zinc finger (AN1-like) family protein; riken struc	98.44
1wfh_A	64	Zinc finger (AN1-like) family protein; ZF-AN1 doma	98.39
1wfp_A	74	Zinc finger (AN1-like) family protein; ZF-AN1 doma	98.24
1wfl_A	74	Zinc finger protein 216; ZF-AN1 domain, zinc bindi	98.18
1x4w_A	67	Hypothetical protein FLJ13222; ZF-AN1 domain, zinc	98.14
1wff_A	85	Riken cDNA 2810002D23 protein; ZF-AN1 domain, zinc	98.13
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	87.89
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	86.2
2yuc_A	76	TNF receptor-associated factor 4; ZF-TRAF, cystein	85.56
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	84.94
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	84.28
2ct0_A	74	Non-SMC element 1 homolog; ring domain, structural	84.25
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	83.02
1ard_A	29	Yeast transcription factor ADR1; transcription reg	81.57
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	81.4
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	82.18
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	80.31
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	80.25

>1wys_A Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc binding, NPPSFA, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus}

Probab=99.76  E-value=4.7e-19  Score=128.12  Aligned_cols=51  Identities=53%  Similarity=1.066  Sum_probs=48.4

Q ss_pred             ccCCCccCcCCCcCCCCCcccccccCCcccccccCCCCcCCCcCCCCCccC
Q 029499            5 TEAFPDLGSHCQHQDCHQLDFLPFKCDGCHKVFCFEHRSFKSHECPKSDIK   55 (192)
Q Consensus         5 ~~ef~diG~hC~~~~C~qlDFLPf~C~~C~~~FC~eHr~~~~H~C~~~~~~   55 (192)
                      .||||+||+||++++|+++|||||+|++|+++||.+||.+++|+|+..+.+
T Consensus         7 ~m~~~~~g~~Cs~~~C~~~dflpf~C~~C~~~FC~~HR~~e~H~C~~~~~~   57 (75)
T 1wys_A            7 GMAELDIGQHCQVQHCRQRDFLPFVCDGCSGIFCLEHRSKDSHGCSEVNVV   57 (75)
T ss_dssp             CCCCCCCCCCCSCTTTCCCSCCCEECTTTCCEECSTTCSSGGGTCCCCSSC
T ss_pred             cccccccCCCcCcccCCCccceeeECcccCcCcCcccCCccccCCCCCccc
Confidence            478999999999999999999999999999999999999999999988754

>1wfe_A Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1

Probab=99.46  E-value=4.3e-14  Score=104.43  Aligned_cols=56  Identities=30%  Similarity=0.621  Sum_probs=49.3

Q ss_pred             CCCCCCCcCcccccccccCcccccccCccccccCcCCCCCCCCCCCCCCccccccccc
Q 029499           97 QKKPSCPVKRCKEKLTFSNTATCKTCNLKVCLKHRFPADHSCKKDSLLGKNAAADAAV  154 (192)
Q Consensus        97 k~~~~Cs~~~Ck~~~~~~n~~~C~~C~~~FClkHR~p~dH~C~~~~~~~~~~~~~~a~  154 (192)
                      +++++|++.+|++++++  +|.|++|++.||++||+++||.|..+...+.+++..+|.
T Consensus        23 ~~~~~C~~~~Ck~~~~l--~f~C~~C~~~FC~~HR~~e~H~C~~~~~~k~~~~~~~~l   78 (86)
T 1wfe_A           23 HKSYSCSFKGCTDVELV--AVICPYCEKNFCLRHRHQSDHDCEKLEVAKPRMAATQKL   78 (86)
T ss_dssp             SCCEECCSTTCCCEESS--CEECTTTCCEECGGGCSTGGGTCSSSSCCCSSCCCCCCC
T ss_pred             CCCCCCCCcCCCCCCcc--ceECCCCCcccccccCCccCCCCCCCcccccchHHHHHH
Confidence            45689999999999765  999999999999999999999999998888877777643

>1x4v_A Hypothetical protein LOC130617; ZF-AN1 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.37  E-value=2.2e-13  Score=95.41  Aligned_cols=50  Identities=24%  Similarity=0.727  Sum_probs=46.0

Q ss_pred             CccCCCccCcCCCcCCCCCcccccccCCcccccccCCCCcCCCcCCCCCc
Q 029499            4 GTEAFPDLGSHCQHQDCHQLDFLPFKCDGCHKVFCFEHRSFKSHECPKSD   53 (192)
Q Consensus         4 g~~ef~diG~hC~~~~C~qlDFLPf~C~~C~~~FC~eHr~~~~H~C~~~~   53 (192)
                      |++.--..+.+|+++.|+++|||||+|++|++.||.+||.+++|+|+...
T Consensus         4 ~~~k~k~~~~~Cs~~~Ck~~~ll~f~C~~C~~~FC~~HR~~e~H~C~~~~   53 (63)
T 1x4v_A            4 GSSGRKIFTNKCERAGCRQREMMKLTCERCSRNFCIKHRHPLDHDCSGEG   53 (63)
T ss_dssp             CCCCCCTTCCCCCSTTCCCCCSSCCBCSSSCCBCCHHHHSTTSSCCCSTT
T ss_pred             CccCCcccCCCCCccCCCCCCccceECCCCCcccCcccCCccCCcCCCCC
Confidence            66666678999999999999999999999999999999999999999764

>1x4v_A Hypothetical protein LOC130617; ZF-AN1 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.36  E-value=3.3e-13  Score=94.51  Aligned_cols=44  Identities=32%  Similarity=0.800  Sum_probs=39.4

Q ss_pred             CCCCCCCCcCcccccccccCcccccccCccccccCcCCCCCCCCCC
Q 029499           96 KQKKPSCPVKRCKEKLTFSNTATCKTCNLKVCLKHRFPADHSCKKD  141 (192)
Q Consensus        96 kk~~~~Cs~~~Ck~~~~~~n~~~C~~C~~~FClkHR~p~dH~C~~~  141 (192)
                      +.++++|++.+|+++.++  +|.|++|+++||++||+++||.|...
T Consensus         9 k~~~~~Cs~~~Ck~~~ll--~f~C~~C~~~FC~~HR~~e~H~C~~~   52 (63)
T 1x4v_A            9 KIFTNKCERAGCRQREMM--KLTCERCSRNFCIKHRHPLDHDCSGE   52 (63)
T ss_dssp             CTTCCCCCSTTCCCCCSS--CCBCSSSCCBCCHHHHSTTSSCCCST
T ss_pred             cccCCCCCccCCCCCCcc--ceECCCCCcccCcccCCccCCcCCCC
Confidence            345789999999998765  89999999999999999999999875

>1wys_A Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc binding, NPPSFA, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus}

Probab=99.19  E-value=8.1e-12  Score=90.16  Aligned_cols=51  Identities=24%  Similarity=0.621  Sum_probs=43.9

Q ss_pred             CCCCCcCcccccccccCcccccccCccccccCcCCCCCCCCCCCCCCcccccc
Q 029499           99 KPSCPVKRCKEKLTFSNTATCKTCNLKVCLKHRFPADHSCKKDSLLGKNAAAD  151 (192)
Q Consensus        99 ~~~Cs~~~Ck~~~~~~n~~~C~~C~~~FClkHR~p~dH~C~~~~~~~~~~~~~  151 (192)
                      .++|++.+|+++.++  ++.|+.|+++||++||++++|.|........+++..
T Consensus        14 g~~Cs~~~C~~~dfl--pf~C~~C~~~FC~~HR~~e~H~C~~~~~~~~~~~~~   64 (75)
T 1wys_A           14 GQHCQVQHCRQRDFL--PFVCDGCSGIFCLEHRSKDSHGCSEVNVVKERPKTD   64 (75)
T ss_dssp             CCCCSCTTTCCCSCC--CEECTTTCCEECSTTCSSGGGTCCCCSSCSSCCCCC
T ss_pred             CCCcCcccCCCccce--eeECcccCcCcCcccCCccccCCCCCccccccccCC
Confidence            579999999999876  999999999999999999999999887655544443

>1wfe_A Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1

Probab=99.17  E-value=7.4e-12  Score=92.41  Aligned_cols=42  Identities=29%  Similarity=0.816  Sum_probs=39.7

Q ss_pred             CcCCCcCCCCCcccccccCCcccccccCCCCcCCCcCCCCCc
Q 029499           12 GSHCQHQDCHQLDFLPFKCDGCHKVFCFEHRSFKSHECPKSD   53 (192)
Q Consensus        12 G~hC~~~~C~qlDFLPf~C~~C~~~FC~eHr~~~~H~C~~~~   53 (192)
                      -.+|++++|+++|||||+|++|++.||.+||.+++|+|+.+.
T Consensus        25 ~~~C~~~~Ck~~~~l~f~C~~C~~~FC~~HR~~e~H~C~~~~   66 (86)
T 1wfe_A           25 SYSCSFKGCTDVELVAVICPYCEKNFCLRHRHQSDHDCEKLE   66 (86)
T ss_dssp             CEECCSTTCCCEESSCEECTTTCCEECGGGCSTGGGTCSSSS
T ss_pred             CCCCCCcCCCCCCccceECCCCCcccccccCCccCCCCCCCc
Confidence            358999999999999999999999999999999999999875

>1wg2_A Zinc finger (AN1-like) family protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.80.1.1

Probab=98.96  E-value=4.9e-10  Score=78.60  Aligned_cols=42  Identities=29%  Similarity=0.717  Sum_probs=35.5

Q ss_pred             CCCCCCCCcCcccccccccCcccccccCccccccCcCCCCCCCCCC
Q 029499           96 KQKKPSCPVKRCKEKLTFSNTATCKTCNLKVCLKHRFPADHSCKKD  141 (192)
Q Consensus        96 kk~~~~Cs~~~Ck~~~~~~n~~~C~~C~~~FClkHR~p~dH~C~~~  141 (192)
                      ++.+++|+.  |++.+.++ ++.| .|+.+||++||++++|+|.-.
T Consensus        12 ~~~~~rC~~--C~kkvgl~-~f~C-rCg~~FC~~HR~~e~H~C~fD   53 (64)
T 1wg2_A           12 VRPNNRCFS--CNKKVGVM-GFKC-KCGSTFCGSHRYPEKHECSFD   53 (64)
T ss_dssp             SCCSCSCTT--TCCCCTTS-CEEC-TTSCEECSSSCSSTTTTCCCC
T ss_pred             CCcCCcChh--hCCccccc-CeEe-ecCCEecccCCCccccCCCcc
Confidence            345789995  99986654 7999 899999999999999999743

>1wfh_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1

Probab=98.95  E-value=3.8e-10  Score=79.14  Aligned_cols=41  Identities=29%  Similarity=0.820  Sum_probs=35.4

Q ss_pred             CCCCCCCCcCcccccccccCcccccccCccccccCcCCCCCCCCC
Q 029499           96 KQKKPSCPVKRCKEKLTFSNTATCKTCNLKVCLKHRFPADHSCKK  140 (192)
Q Consensus        96 kk~~~~Cs~~~Ck~~~~~~n~~~C~~C~~~FClkHR~p~dH~C~~  140 (192)
                      +.++++|+.  |++++.++ ++.| .|+.+||++|||+++|+|.-
T Consensus        12 k~~~~rC~~--C~kkvgl~-~f~C-rCg~~FC~~HRy~e~H~C~f   52 (64)
T 1wfh_A           12 PQRPNRCTV--CRKRVGLT-GFMC-RCGTTFCGSHRYPEVHGCTF   52 (64)
T ss_dssp             CSSCCCCTT--TCCCCCTT-CEEC-SSSCEECTTTCSTTTTTCCC
T ss_pred             CCcCCcChh--hCCccCcc-CEEe-ecCCEeccccCCcccCCCCc
Confidence            456789996  99987664 7999 79999999999999999974

>1wfp_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1

Probab=98.91  E-value=6.9e-10  Score=79.82  Aligned_cols=42  Identities=31%  Similarity=0.793  Sum_probs=36.2

Q ss_pred             CCCCCCCCcCcccccccccCcccccccCccccccCcCCCCCCCCCC
Q 029499           96 KQKKPSCPVKRCKEKLTFSNTATCKTCNLKVCLKHRFPADHSCKKD  141 (192)
Q Consensus        96 kk~~~~Cs~~~Ck~~~~~~n~~~C~~C~~~FClkHR~p~dH~C~~~  141 (192)
                      ++.+++|+.  |++.+.++ ++.| .|+.+||++|||+++|+|.-.
T Consensus        22 k~~~~RC~~--C~kkvgL~-~f~C-rCg~~FCs~HRy~e~H~C~fD   63 (74)
T 1wfp_A           22 KSTATRCLS--CNKKVGVT-GFKC-RCGSTFCGTHRYPESHECQFD   63 (74)
T ss_dssp             TCCCCBCSS--SCCBCTTT-CEEC-TTSCEECTTTCSTTTSCCCSC
T ss_pred             cccCccchh--hcCccccc-ceEe-ccCCEeccccCCCcCCCCcCc
Confidence            456789996  99887664 8999 899999999999999999853

>1wff_A Riken cDNA 2810002D23 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1

Probab=98.85  E-value=8.3e-10  Score=81.33  Aligned_cols=42  Identities=26%  Similarity=0.729  Sum_probs=36.7

Q ss_pred             CCCCCCCCcCcccccccccCcccccccCccccccCcCCCCCCCCC
Q 029499           96 KQKKPSCPVKRCKEKLTFSNTATCKTCNLKVCLKHRFPADHSCKK  140 (192)
Q Consensus        96 kk~~~~Cs~~~Ck~~~~~~n~~~C~~C~~~FClkHR~p~dH~C~~  140 (192)
                      ++.+++|.+  |++.+.+++++.|. |+..||++|||+++|+|.-
T Consensus        22 k~~~~rC~~--C~kkvgl~~~f~Cr-Cg~~FC~~HRy~e~H~C~f   63 (85)
T 1wff_A           22 KKIMKHCFL--CGKKTGLATSFECR-CGNNFCASHRYAEAHGCNY   63 (85)
T ss_dssp             CCCCCBCSS--SCCBCSSSSCEECT-TCCEECTTTCSTGGGTCCS
T ss_pred             cccCccchh--hCCeecccCCeEcC-CCCEecccCCCccCCCCcc
Confidence            345689999  99987775689995 9999999999999999985

>1wfl_A Zinc finger protein 216; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1

Probab=98.85  E-value=1.3e-09  Score=78.32  Aligned_cols=41  Identities=32%  Similarity=0.774  Sum_probs=35.2

Q ss_pred             CCCCCCCCcCcccccccccCcccccccCccccccCcCCCCCCCCC
Q 029499           96 KQKKPSCPVKRCKEKLTFSNTATCKTCNLKVCLKHRFPADHSCKK  140 (192)
Q Consensus        96 kk~~~~Cs~~~Ck~~~~~~n~~~C~~C~~~FClkHR~p~dH~C~~  140 (192)
                      ++++++|.+  |++++.++ ++.|. |+..||++|||+++|+|.-
T Consensus        22 k~~~nRC~~--CrKkvgL~-gf~Cr-Cg~~FCs~HRy~e~H~C~f   62 (74)
T 1wfl_A           22 KPKKNRCFM--CRKKVGLT-GFDCR-CGNLFCGLHRYSDKHNCPY   62 (74)
T ss_dssp             CSCTTBCSS--SCCBCGGG-CEECT-TSCEECSSSCSTTTTTCCC
T ss_pred             CCcCCcChh--hCCccccc-CeecC-CCCEechhcCCCccCCCcc
Confidence            346789999  99875553 79998 9999999999999999974

>1x4w_A Hypothetical protein FLJ13222; ZF-AN1 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.82  E-value=1.1e-09  Score=77.54  Aligned_cols=43  Identities=30%  Similarity=0.835  Sum_probs=36.1

Q ss_pred             CCCCCCCCcCcccccccccC--cccccccCccccccCcCCCCCCCCCC
Q 029499           96 KQKKPSCPVKRCKEKLTFSN--TATCKTCNLKVCLKHRFPADHSCKKD  141 (192)
Q Consensus        96 kk~~~~Cs~~~Ck~~~~~~n--~~~C~~C~~~FClkHR~p~dH~C~~~  141 (192)
                      ++.+++|.+  |++++.+.+  .+.| .|+..||.+|||+++|+|.-.
T Consensus        12 ~~~~~rC~~--C~kk~gL~~~egf~C-rCg~~FC~~HRy~e~H~C~fD   56 (67)
T 1x4w_A           12 QKSRRRCFQ--CQTKLELVQQELGSC-RCGYVFCMLHRLPEQHDCTFD   56 (67)
T ss_dssp             CSCTTBCSS--SCCBCCHHHHHHHCC-SSSCCCCTTTCSTGGGTCSSC
T ss_pred             CccCCcchh--hCCeecccccCceEe-cCCCEehhccCCccccCCccc
Confidence            456789998  999887722  1899 999999999999999999843

>1wg2_A Zinc finger (AN1-like) family protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.80.1.1

Probab=98.44  E-value=1e-07  Score=66.76  Aligned_cols=40  Identities=33%  Similarity=0.760  Sum_probs=35.1

Q ss_pred             cCcCCCcCCCCC-cccccccCCcccccccCCCCcCCCcCCCCCc
Q 029499           11 LGSHCQHQDCHQ-LDFLPFKCDGCHKVFCFEHRSFKSHECPKSD   53 (192)
Q Consensus        11 iG~hC~~~~C~q-lDFLPf~C~~C~~~FC~eHr~~~~H~C~~~~   53 (192)
                      .-.+|+  .|++ +.+++|+| .|+++||..||.+++|+|+-..
T Consensus        14 ~~~rC~--~C~kkvgl~~f~C-rCg~~FC~~HR~~e~H~C~fDy   54 (64)
T 1wg2_A           14 PNNRCF--SCNKKVGVMGFKC-KCGSTFCGSHRYPEKHECSFDF   54 (64)
T ss_dssp             CSCSCT--TTCCCCTTSCEEC-TTSCEECSSSCSSTTTTCCCCC
T ss_pred             cCCcCh--hhCCcccccCeEe-ecCCEecccCCCccccCCCcch
Confidence            346898  9998 68889999 7999999999999999998544

>1wfh_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1

Probab=98.39  E-value=1.6e-07  Score=65.77  Aligned_cols=40  Identities=28%  Similarity=0.629  Sum_probs=34.9

Q ss_pred             cCcCCCcCCCCC-cccccccCCcccccccCCCCcCCCcCCCCCc
Q 029499           11 LGSHCQHQDCHQ-LDFLPFKCDGCHKVFCFEHRSFKSHECPKSD   53 (192)
Q Consensus        11 iG~hC~~~~C~q-lDFLPf~C~~C~~~FC~eHr~~~~H~C~~~~   53 (192)
                      .-.+|+  .|++ +.+++|+| .|+++||..||.++.|+|+-..
T Consensus        14 ~~~rC~--~C~kkvgl~~f~C-rCg~~FC~~HRy~e~H~C~fDy   54 (64)
T 1wfh_A           14 RPNRCT--VCRKRVGLTGFMC-RCGTTFCGSHRYPEVHGCTFDF   54 (64)
T ss_dssp             SCCCCT--TTCCCCCTTCEEC-SSSCEECTTTCSTTTTTCCCCC
T ss_pred             cCCcCh--hhCCccCccCEEe-ecCCEeccccCCcccCCCCchh
Confidence            347898  9998 58889999 5999999999999999998543

>1wfp_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1

Probab=98.24  E-value=4.9e-07  Score=64.96  Aligned_cols=39  Identities=36%  Similarity=0.789  Sum_probs=33.6

Q ss_pred             CcCCCcCCCC-CcccccccCCcccccccCCCCcCCCcCCCCCc
Q 029499           12 GSHCQHQDCH-QLDFLPFKCDGCHKVFCFEHRSFKSHECPKSD   53 (192)
Q Consensus        12 G~hC~~~~C~-qlDFLPf~C~~C~~~FC~eHr~~~~H~C~~~~   53 (192)
                      -.+|+  .|+ ++.+++|+| .|+++||..||.++.|+|+-..
T Consensus        25 ~~RC~--~C~kkvgL~~f~C-rCg~~FCs~HRy~e~H~C~fDy   64 (74)
T 1wfp_A           25 ATRCL--SCNKKVGVTGFKC-RCGSTFCGTHRYPESHECQFDF   64 (74)
T ss_dssp             CCBCS--SSCCBCTTTCEEC-TTSCEECTTTCSTTTSCCCSCT
T ss_pred             Cccch--hhcCcccccceEe-ccCCEeccccCCCcCCCCcCch
Confidence            35787  898 458889999 6999999999999999998654

>1wfl_A Zinc finger protein 216; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1

Probab=98.18  E-value=9.2e-07  Score=63.55  Aligned_cols=38  Identities=32%  Similarity=0.773  Sum_probs=34.1

Q ss_pred             cCCCcCCCCCc-ccccccCCcccccccCCCCcCCCcCCCCCc
Q 029499           13 SHCQHQDCHQL-DFLPFKCDGCHKVFCFEHRSFKSHECPKSD   53 (192)
Q Consensus        13 ~hC~~~~C~ql-DFLPf~C~~C~~~FC~eHr~~~~H~C~~~~   53 (192)
                      .+|.  .|++. .+++|+|. |+..||..||.++.|+|+-..
T Consensus        26 nRC~--~CrKkvgL~gf~Cr-Cg~~FCs~HRy~e~H~C~fDy   64 (74)
T 1wfl_A           26 NRCF--MCRKKVGLTGFDCR-CGNLFCGLHRYSDKHNCPYDY   64 (74)
T ss_dssp             TBCS--SSCCBCGGGCEECT-TSCEECSSSCSTTTTTCCCCG
T ss_pred             CcCh--hhCCcccccCeecC-CCCEechhcCCCccCCCcchh
Confidence            4799  69994 99999999 999999999999999998654

>1x4w_A Hypothetical protein FLJ13222; ZF-AN1 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.14  E-value=1.3e-06  Score=61.69  Aligned_cols=38  Identities=32%  Similarity=0.643  Sum_probs=34.6

Q ss_pred             cCCCcCCCCCccccc----ccCCcccccccCCCCcCCCcCCCCCc
Q 029499           13 SHCQHQDCHQLDFLP----FKCDGCHKVFCFEHRSFKSHECPKSD   53 (192)
Q Consensus        13 ~hC~~~~C~qlDFLP----f~C~~C~~~FC~eHr~~~~H~C~~~~   53 (192)
                      .+|.  .|++...|+    |+| .|+.+||..||.++.|+|+-..
T Consensus        16 ~rC~--~C~kk~gL~~~egf~C-rCg~~FC~~HRy~e~H~C~fDy   57 (67)
T 1x4w_A           16 RRCF--QCQTKLELVQQELGSC-RCGYVFCMLHRLPEQHDCTFDH   57 (67)
T ss_dssp             TBCS--SSCCBCCHHHHHHHCC-SSSCCCCTTTCSTGGGTCSSCS
T ss_pred             Ccch--hhCCeecccccCceEe-cCCCEehhccCCccccCCcccc
Confidence            5788  699999999    999 8999999999999999998544

>1wff_A Riken cDNA 2810002D23 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1

Probab=98.13  E-value=1.6e-06  Score=63.80  Aligned_cols=38  Identities=32%  Similarity=0.759  Sum_probs=32.3

Q ss_pred             cCCCcCCCCCc-ccc-cccCCcccccccCCCCcCCCcCCCCCc
Q 029499           13 SHCQHQDCHQL-DFL-PFKCDGCHKVFCFEHRSFKSHECPKSD   53 (192)
Q Consensus        13 ~hC~~~~C~ql-DFL-Pf~C~~C~~~FC~eHr~~~~H~C~~~~   53 (192)
                      .+|.  .|++. .++ ||+|. |+.+||..||.+++|+|+-..
T Consensus        26 ~rC~--~C~kkvgl~~~f~Cr-Cg~~FC~~HRy~e~H~C~fDy   65 (85)
T 1wff_A           26 KHCF--LCGKKTGLATSFECR-CGNNFCASHRYAEAHGCNYDY   65 (85)
T ss_dssp             CBCS--SSCCBCSSSSCEECT-TCCEECTTTCSTGGGTCCSCC
T ss_pred             ccch--hhCCeecccCCeEcC-CCCEecccCCCccCCCCcchh
Confidence            5888  59984 554 99997 999999999999999998643

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=87.89  E-value=0.18  Score=34.88  Aligned_cols=51  Identities=20%  Similarity=0.424  Sum_probs=30.2

Q ss_pred             ccccCCcccccccCCCCcCCCcCCCCCccCCcccccccccCcccccCCCCCCChhHHHHhhcc
Q 029499           26 LPFKCDGCHKVFCFEHRSFKSHECPKSDIKSRKVIVCEVCSVSIETTGEFGEGEKTMLEKHKK   88 (192)
Q Consensus        26 LPf~C~~C~~~FC~eHr~~~~H~C~~~~~~~~~v~~CPlC~~~v~~~~~~g~~~n~~v~~Hi~   88 (192)
                      -||+|+.|++.|=..... ..|.   ....+.+...|++|++....        ...|.+|+.
T Consensus        16 ~~~~C~~C~~~f~~~~~l-~~H~---~~h~~~~~~~C~~C~~~f~~--------~~~l~~H~~   66 (106)
T 2ee8_A           16 KEFICKFCGRHFTKSYNL-LIHE---RTHTDERPYTCDICHKAFRR--------QDHLRDHRY   66 (106)
T ss_dssp             CCCBCSSSCCBCSSHHHH-HHHH---HHHCCSCCCBCSSSCCBCSC--------HHHHHHHGG
T ss_pred             cCeECCCCCCccCCHHHH-HHHH---HHcCCCCCcCCCCccchhCC--------HHHHHHHHH
Confidence            479999999998432111 1111   00122356789999987654        235778875

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=86.20  E-value=0.19  Score=33.94  Aligned_cols=51  Identities=27%  Similarity=0.485  Sum_probs=30.2

Q ss_pred             ccccCCcccccccCCCCcCCCcCCCCCccCCcccccccccCcccccCCCCCCChhHHHHhhcc
Q 029499           26 LPFKCDGCHKVFCFEHRSFKSHECPKSDIKSRKVIVCEVCSVSIETTGEFGEGEKTMLEKHKK   88 (192)
Q Consensus        26 LPf~C~~C~~~FC~eHr~~~~H~C~~~~~~~~~v~~CPlC~~~v~~~~~~g~~~n~~v~~Hi~   88 (192)
                      -||+|+.|++.|=..... ..|.=   .....+...|++|++....        ...|.+|+.
T Consensus         7 ~~~~C~~C~~~f~~~~~l-~~H~~---~h~~~~~~~C~~C~~~f~~--------~~~l~~H~~   57 (96)
T 2dmd_A            7 GPHKCEVCGKCFSRKDKL-KTHMR---CHTGVKPYKCKTCDYAAAD--------SSSLNKHLR   57 (96)
T ss_dssp             CCCCBTTTTBCCCCHHHH-HHHGG---GCCCCCSEECSSSCCEESS--------HHHHHHHHH
T ss_pred             cCeECCCCCCccCCHHHH-HHHHH---hcCCCCCEeCCCCCCccCC--------HHHHHHHHH
Confidence            489999999998432211 11210   0112346789999987764        234667875

>2yuc_A TNF receptor-associated factor 4; ZF-TRAF, cysteine-rich domain associated with ring and TRAF domains protein 1, malignant 62; NMR {Homo sapiens}

Probab=85.56  E-value=1.5  Score=29.43  Aligned_cols=47  Identities=26%  Similarity=0.639  Sum_probs=34.7

Q ss_pred             cccccC-CcccccccCCCCcCCCc---CCCCCccCCcccccccccCcccccCCCCCCChhHHHHhhcc
Q 029499           25 FLPFKC-DGCHKVFCFEHRSFKSH---ECPKSDIKSRKVIVCEVCSVSIETTGEFGEGEKTMLEKHKK   88 (192)
Q Consensus        25 FLPf~C-~~C~~~FC~eHr~~~~H---~C~~~~~~~~~v~~CPlC~~~v~~~~~~g~~~n~~v~~Hi~   88 (192)
                      |.|+.| ..|+..+-....  +.|   .|+.      +.+.|++|+..+...         .++.|..
T Consensus        14 ~~~v~C~~~C~~~v~r~~l--~~H~~~~C~~------r~v~C~~C~~~~~~~---------~l~~H~~   64 (76)
T 2yuc_A           14 FNVIPCPNRCPMKLSRRDL--PAHLQHDCPK------RRLKCEFCGCDFSGE---------AYESHEG   64 (76)
T ss_dssp             CSCCBCTTCCSCBCCSSSS--TTTTTTSCTT------SCCCCSSSCCCCCHH---------HHHHTTT
T ss_pred             CcccCCCccccHHhhHhHH--HhhCHhhCCC------cceECCCCCCccCHH---------HHHHHHh
Confidence            899999 689888766443  455   6775      457899999887752         4788974

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=84.94  E-value=0.1  Score=40.61  Aligned_cols=90  Identities=16%  Similarity=0.231  Sum_probs=53.5

Q ss_pred             CCCcCCCCCcccccccCCcccccccCCCCcCCCcCCCCCccCCcccccccccCcccccCCCCCCChhHHHHhhcccCCCC
Q 029499           14 HCQHQDCHQLDFLPFKCDGCHKVFCFEHRSFKSHECPKSDIKSRKVIVCEVCSVSIETTGEFGEGEKTMLEKHKKSGDCD   93 (192)
Q Consensus        14 hC~~~~C~qlDFLPf~C~~C~~~FC~eHr~~~~H~C~~~~~~~~~v~~CPlC~~~v~~~~~~g~~~n~~v~~Hi~s~~C~   93 (192)
                      .|.  .|..+=.-|+++. |+.+||..=+..        - .......||+|.++|...   ..-++.++++-+.+    
T Consensus        20 ~C~--IC~~~~~~pv~~~-CgH~fC~~Ci~~--------~-~~~~~~~CP~Cr~~~~~~---~~~~~~~~~~~i~~----   80 (170)
T 3hcs_A           20 ECP--ICLMALREAVQTP-CGHRFCKACIIK--------S-IRDAGHKCPVDNEILLEN---QLFPDNFAKREILS----   80 (170)
T ss_dssp             BCT--TTCSBCSSEEECT-TSCEEEHHHHHH--------H-HHHHCSBCTTTCCBCCGG---GCEECHHHHHHHHT----
T ss_pred             CCC--CCChhhcCcEECC-CCCHHHHHHHHH--------H-HHhCCCCCCCCccCcchh---hhhhhHHHHHHHhh----
Confidence            566  8888777788874 999998764421        0 001123899999888652   23345556555542    


Q ss_pred             cCCCCCCCCCcCccccccccc-----------CcccccccCccc
Q 029499           94 PRKQKKPSCPVKRCKEKLTFS-----------NTATCKTCNLKV  126 (192)
Q Consensus        94 p~kk~~~~Cs~~~Ck~~~~~~-----------n~~~C~~C~~~F  126 (192)
                          -...|...||+..+.+.           .++.|+.|+..+
T Consensus        81 ----l~v~C~n~GC~~~~~~~~l~~H~~~C~~~~v~C~~C~~~~  120 (170)
T 3hcs_A           81 ----LMVKCPNEGCLHKMELRHLEDHQAHCEFALMDCPQCQRPF  120 (170)
T ss_dssp             ----SEEECCSTTCCCEEEGGGHHHHHTTCTTSEEECTTTCCEE
T ss_pred             ----cccCCCCCCCCceecHhHHHHHHhcCCceeeECCCCChHH
Confidence                12357667787654321           134577777655

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=84.28  E-value=0.18  Score=35.45  Aligned_cols=12  Identities=17%  Similarity=0.628  Sum_probs=9.3

Q ss_pred             cccccccCcccc
Q 029499          116 TATCKTCNLKVC  127 (192)
Q Consensus       116 ~~~C~~C~~~FC  127 (192)
                      ++.|+.|++.|=
T Consensus        94 ~~~C~~C~~~f~  105 (124)
T 2dlq_A           94 PYKCSSCSQQFM  105 (124)
T ss_dssp             SEECSSSCCEES
T ss_pred             CccCCCccchhC
Confidence            567888888774

>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=84.25  E-value=0.92  Score=31.70  Aligned_cols=56  Identities=25%  Similarity=0.465  Sum_probs=40.4

Q ss_pred             CccCCCccCcCCCcCCCCCcccccccCCcccccc---cCCCCcCCCcCCCCCccCCcccccccccCcccccC
Q 029499            4 GTEAFPDLGSHCQHQDCHQLDFLPFKCDGCHKVF---CFEHRSFKSHECPKSDIKSRKVIVCEVCSVSIETT   72 (192)
Q Consensus         4 g~~ef~diG~hC~~~~C~qlDFLPf~C~~C~~~F---C~eHr~~~~H~C~~~~~~~~~v~~CPlC~~~v~~~   72 (192)
                      |..+|++.-..|.  +|+.+-..=.+|..|+..|   |...+..           .+...+||+|++.++..
T Consensus         7 ~~~~y~~~i~~C~--IC~~~i~~g~~C~~C~h~fH~~Ci~kWl~-----------~~~~~~CP~Cr~~w~~~   65 (74)
T 2ct0_A            7 GRETYPDAVKICN--ICHSLLIQGQSCETCGIRMHLPCVAKYFQ-----------SNAEPRCPHCNDYWPHE   65 (74)
T ss_dssp             CCCCCSSSSCBCS--SSCCBCSSSEECSSSCCEECHHHHHHHST-----------TCSSCCCTTTCSCCCSC
T ss_pred             chhhccCCCCcCc--chhhHcccCCccCCCCchhhHHHHHHHHH-----------hcCCCCCCCCcCcCCCC
Confidence            6788999999999  9998877666777776665   5544431           12237899999988753

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=83.02  E-value=0.37  Score=24.63  Aligned_cols=11  Identities=36%  Similarity=1.126  Sum_probs=5.9

Q ss_pred             cccCCcccccc
Q 029499           27 PFKCDGCHKVF   37 (192)
Q Consensus        27 Pf~C~~C~~~F   37 (192)
                      ||+|+.|++.|
T Consensus         1 ~~~C~~C~k~f   11 (27)
T 1znf_A            1 XYKCGLCERSF   11 (27)
T ss_dssp             -CBCSSSCCBC
T ss_pred             CccCCCCCCcC
Confidence            45666666555

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=81.57  E-value=0.46  Score=24.52  Aligned_cols=11  Identities=36%  Similarity=1.138  Sum_probs=7.3

Q ss_pred             cccCCcccccc
Q 029499           27 PFKCDGCHKVF   37 (192)
Q Consensus        27 Pf~C~~C~~~F   37 (192)
                      ||+|+.|++.|
T Consensus         2 ~~~C~~C~~~f   12 (29)
T 1ard_A            2 SFVCEVCTRAF   12 (29)
T ss_dssp             CCBCTTTCCBC
T ss_pred             CeECCCCCccc
Confidence            56677666665

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=81.40  E-value=0.43  Score=24.65  Aligned_cols=11  Identities=36%  Similarity=0.890  Sum_probs=8.2

Q ss_pred             cccCCcccccc
Q 029499           27 PFKCDGCHKVF   37 (192)
Q Consensus        27 Pf~C~~C~~~F   37 (192)
                      ||+|+.|++.|
T Consensus         3 ~~~C~~C~k~f   13 (27)
T 2kvh_A            3 PFSCSLCPQRS   13 (27)
T ss_dssp             CEECSSSSCEE
T ss_pred             CccCCCcChhh
Confidence            67777777776

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=82.18  E-value=0.3  Score=25.03  Aligned_cols=13  Identities=38%  Similarity=1.022  Sum_probs=9.8

Q ss_pred             cccCCcccccccC
Q 029499           27 PFKCDGCHKVFCF   39 (192)
Q Consensus        27 Pf~C~~C~~~FC~   39 (192)
                      ||+|+.|++.|=.
T Consensus         2 p~~C~~C~k~f~~   14 (26)
T 2lvu_A            2 PYVCERCGKRFVQ   14 (26)
Confidence            6888888887754

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=80.31  E-value=0.51  Score=24.15  Aligned_cols=12  Identities=42%  Similarity=0.849  Sum_probs=8.2

Q ss_pred             cccCCccccccc
Q 029499           27 PFKCDGCHKVFC   38 (192)
Q Consensus        27 Pf~C~~C~~~FC   38 (192)
                      ||+|+.|++.|-
T Consensus         2 ~~~C~~C~~~f~   13 (29)
T 2m0e_A            2 EHKCPHCDKKFN   13 (29)
T ss_dssp             CCCCSSCCCCCC
T ss_pred             CCcCCCCCcccC
Confidence            667777777664

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=80.25  E-value=0.4  Score=25.01  Aligned_cols=12  Identities=25%  Similarity=0.730  Sum_probs=8.9

Q ss_pred             cccCCccccccc
Q 029499           27 PFKCDGCHKVFC   38 (192)
Q Consensus        27 Pf~C~~C~~~FC   38 (192)
                      ||+|+.|++.|=
T Consensus         3 ~~~C~~C~k~f~   14 (27)
T 2kvg_A            3 PYRCPLCRAGCP   14 (27)
T ss_dssp             TEEETTTTEEES
T ss_pred             CcCCCCCCcccC
Confidence            677888877763

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	192
d1wfea_	86	g.80.1.1 (A:) AN1-type zinc finger protein 1 {Mous	8e-12
d1wfea_	86	g.80.1.1 (A:) AN1-type zinc finger protein 1 {Mous	0.001

>d1wfea_ g.80.1.1 (A:) AN1-type zinc finger protein 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 86

class: Small proteins
fold: AN1-like Zinc finger
superfamily: AN1-like Zinc finger
family: AN1-like Zinc finger
domain: AN1-type zinc finger protein 1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 56.6 bits (136), Expect = 8e-12
 Identities = 14/60 (23%), Positives = 26/60 (43%)

Query: 14 HCQHQDCHQLDFLPFKCDGCHKVFCFEHRSFKSHECPKSDIKSRKVIVCEVCSVSIETTG 73
           C  + C  ++ +   C  C K FC  HR    H+C K ++   ++   +    S  ++G
Sbjct: 27 SCSFKGCTDVELVAVICPYCEKNFCLRHRHQSDHDCEKLEVAKPRMAATQKLVRSGPSSG 86

>d1wfea_ g.80.1.1 (A:) AN1-type zinc finger protein 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 86

class: Small proteins
fold: AN1-like Zinc finger
superfamily: AN1-like Zinc finger
family: AN1-like Zinc finger
domain: AN1-type zinc finger protein 1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 34.2 bits (78), Expect = 0.001
 Identities = 16/57 (28%), Positives = 23/57 (40%), Gaps = 2/57 (3%)

Query: 84  EKHKKSGDCDPRKQKKPSCPVKRCKEKLTFSNTATCKTCNLKVCLKHRFPADHSCKK 140
           E +         + K  SC  K C +    +    C  C    CL+HR  +DH C+K
Sbjct: 10  EVNVVKERPKTDEHKSYSCSFKGCTDVELVA--VICPYCEKNFCLRHRHQSDHDCEK 64

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	192
d1wfea_	86	AN1-type zinc finger protein 1 {Mouse (Mus musculu	99.36
d1wfea_	86	AN1-type zinc finger protein 1 {Mouse (Mus musculu	99.31
d1wfpa_	74	Zinc finger A20 and AN1 domains containing protein	98.86
d1wfha_	64	Zinc finger A20 and AN1 domains containing protein	98.78
d1wfla_	74	Zinc finger A20 domain containing protein 2 {Mouse	98.76
d1wffa_	85	ANUBL1 (AN1, ubiquitin-like, homolog) {Mouse (Mus	98.65
d1wfla_	74	Zinc finger A20 domain containing protein 2 {Mouse	97.88
d1wffa_	85	ANUBL1 (AN1, ubiquitin-like, homolog) {Mouse (Mus	97.87
d1wfha_	64	Zinc finger A20 and AN1 domains containing protein	97.56
d1wfpa_	74	Zinc finger A20 and AN1 domains containing protein	97.56
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	89.1
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	85.35
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	85.16
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	84.72
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	83.47
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	83.24
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	80.56

>d1wfea_ g.80.1.1 (A:) AN1-type zinc finger protein 1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: AN1-like Zinc finger
superfamily: AN1-like Zinc finger
family: AN1-like Zinc finger
domain: AN1-type zinc finger protein 1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.36  E-value=1.3e-13  Score=100.08  Aligned_cols=53  Identities=32%  Similarity=0.639  Sum_probs=47.5

Q ss_pred             CCCCCCcCcccccccccCcccccccCccccccCcCCCCCCCCCCCCCCccccccc
Q 029499           98 KKPSCPVKRCKEKLTFSNTATCKTCNLKVCLKHRFPADHSCKKDSLLGKNAAADA  152 (192)
Q Consensus        98 ~~~~Cs~~~Ck~~~~~~n~~~C~~C~~~FClkHR~p~dH~C~~~~~~~~~~~~~~  152 (192)
                      +.+.|++.+|++++++  +|+|++|+++||++||++++|.|..+....++++++.
T Consensus        24 ~~~~Cs~~~C~~~~~l--p~~C~~C~~~FC~~Hr~~e~H~C~~~~~~~~r~~~~~   76 (86)
T d1wfea_          24 KSYSCSFKGCTDVELV--AVICPYCEKNFCLRHRHQSDHDCEKLEVAKPRMAATQ   76 (86)
T ss_dssp             CCEECCSTTCCCEESS--CEECTTTCCEECGGGCSTGGGTCSSSSCCCSSCCCCC
T ss_pred             ccCcCCCCCCCCcccC--cccchhhCcchhhccCCccCCCCCCCCccccchHHHh
Confidence            4568999999998877  9999999999999999999999999988888776655

>d1wfea_ g.80.1.1 (A:) AN1-type zinc finger protein 1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: AN1-like Zinc finger
superfamily: AN1-like Zinc finger
family: AN1-like Zinc finger
domain: AN1-type zinc finger protein 1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.31  E-value=7e-13  Score=96.18  Aligned_cols=45  Identities=27%  Similarity=0.782  Sum_probs=40.9

Q ss_pred             CcCCCcCCCCCcccccccCCcccccccCCCCcCCCcCCCCCccCC
Q 029499           12 GSHCQHQDCHQLDFLPFKCDGCHKVFCFEHRSFKSHECPKSDIKS   56 (192)
Q Consensus        12 G~hC~~~~C~qlDFLPf~C~~C~~~FC~eHr~~~~H~C~~~~~~~   56 (192)
                      ...|+++.|+++|||||+|++|++.||.+||.+++|+|.++....
T Consensus        25 ~~~Cs~~~C~~~~~lp~~C~~C~~~FC~~Hr~~e~H~C~~~~~~~   69 (86)
T d1wfea_          25 SYSCSFKGCTDVELVAVICPYCEKNFCLRHRHQSDHDCEKLEVAK   69 (86)
T ss_dssp             CEECCSTTCCCEESSCEECTTTCCEECGGGCSTGGGTCSSSSCCC
T ss_pred             cCcCCCCCCCCcccCcccchhhCcchhhccCCccCCCCCCCCccc
Confidence            334999999999999999999999999999999999999887543

>d1wfpa_ g.80.1.1 (A:) Zinc finger A20 and AN1 domains containing protein At1g12440 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: AN1-like Zinc finger
superfamily: AN1-like Zinc finger
family: AN1-like Zinc finger
domain: Zinc finger A20 and AN1 domains containing protein At1g12440
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.86  E-value=5.7e-10  Score=78.56  Aligned_cols=43  Identities=30%  Similarity=0.790  Sum_probs=37.0

Q ss_pred             cCCCCCCCCCcCcccccccccCcccccccCccccccCcCCCCCCCCC
Q 029499           94 PRKQKKPSCPVKRCKEKLTFSNTATCKTCNLKVCLKHRFPADHSCKK  140 (192)
Q Consensus        94 p~kk~~~~Cs~~~Ck~~~~~~n~~~C~~C~~~FClkHR~p~dH~C~~  140 (192)
                      |.++++++|.+  |++++.++ .+.| .|+..||.+||+|++|+|.-
T Consensus        20 ~~k~kk~RC~~--C~KKl~l~-~~~C-rCg~~FC~~HR~pe~H~C~f   62 (74)
T d1wfpa_          20 PPKSTATRCLS--CNKKVGVT-GFKC-RCGSTFCGTHRYPESHECQF   62 (74)
T ss_dssp             CTTCCCCBCSS--SCCBCTTT-CEEC-TTSCEECTTTCSTTTSCCCS
T ss_pred             CCCCCCCcChh--cCCccCCC-ceec-CCCChhhhccCCccCcCCCC
Confidence            44667899999  99887764 6788 79999999999999999984

>d1wfha_ g.80.1.1 (A:) Zinc finger A20 and AN1 domains containing protein At2g36320 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: AN1-like Zinc finger
superfamily: AN1-like Zinc finger
family: AN1-like Zinc finger
domain: Zinc finger A20 and AN1 domains containing protein At2g36320
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.78  E-value=1.6e-09  Score=74.31  Aligned_cols=41  Identities=29%  Similarity=0.820  Sum_probs=36.0

Q ss_pred             CCCCCCCCcCcccccccccCcccccccCccccccCcCCCCCCCCC
Q 029499           96 KQKKPSCPVKRCKEKLTFSNTATCKTCNLKVCLKHRFPADHSCKK  140 (192)
Q Consensus        96 kk~~~~Cs~~~Ck~~~~~~n~~~C~~C~~~FClkHR~p~dH~C~~  140 (192)
                      ++++++|.+  |++++.++ .+.| .|+..||.+||+|++|+|.-
T Consensus        12 ~~k~~RC~~--C~KKl~l~-~~~C-rCg~~FC~~HR~pe~H~Ctf   52 (64)
T d1wfha_          12 PQRPNRCTV--CRKRVGLT-GFMC-RCGTTFCGSHRYPEVHGCTF   52 (64)
T ss_dssp             CSSCCCCTT--TCCCCCTT-CEEC-SSSCEECTTTCSTTTTTCCC
T ss_pred             CCCCCcChh--hCCCccce-eeec-cCCCEehhhcCCCcCcCCCC
Confidence            456789999  99988765 7999 59999999999999999984

>d1wfla_ g.80.1.1 (A:) Zinc finger A20 domain containing protein 2 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: AN1-like Zinc finger
superfamily: AN1-like Zinc finger
family: AN1-like Zinc finger
domain: Zinc finger A20 domain containing protein 2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.76  E-value=1.8e-09  Score=75.90  Aligned_cols=41  Identities=32%  Similarity=0.750  Sum_probs=35.7

Q ss_pred             CCCCCCCCcCcccccccccCcccccccCccccccCcCCCCCCCCC
Q 029499           96 KQKKPSCPVKRCKEKLTFSNTATCKTCNLKVCLKHRFPADHSCKK  140 (192)
Q Consensus        96 kk~~~~Cs~~~Ck~~~~~~n~~~C~~C~~~FClkHR~p~dH~C~~  140 (192)
                      ++++++|.+  |++++.++ .+.| .|+..||.+||+|++|+|.-
T Consensus        22 k~k~~RC~~--C~KKl~l~-~~~C-rCg~~FC~~HR~pe~H~Ctf   62 (74)
T d1wfla_          22 KPKKNRCFM--CRKKVGLT-GFDC-RCGNLFCGLHRYSDKHNCPY   62 (74)
T ss_dssp             CSCTTBCSS--SCCBCGGG-CEEC-TTSCEECSSSCSTTTTTCCC
T ss_pred             CCCCCcChh--hCCcccce-eeEc-cCCCEehhhcCCCcCcCCCC
Confidence            456789999  99887664 7999 69999999999999999984

>d1wffa_ g.80.1.1 (A:) ANUBL1 (AN1, ubiquitin-like, homolog) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: AN1-like Zinc finger
superfamily: AN1-like Zinc finger
family: AN1-like Zinc finger
domain: ANUBL1 (AN1, ubiquitin-like, homolog)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.65  E-value=4.9e-09  Score=75.47  Aligned_cols=41  Identities=24%  Similarity=0.697  Sum_probs=35.6

Q ss_pred             CCCCCCCcCcccccccccCcccccccCccccccCcCCCCCCCCC
Q 029499           97 QKKPSCPVKRCKEKLTFSNTATCKTCNLKVCLKHRFPADHSCKK  140 (192)
Q Consensus        97 k~~~~Cs~~~Ck~~~~~~n~~~C~~C~~~FClkHR~p~dH~C~~  140 (192)
                      +..++|.+  |++++.++..+.| .|+..||.+||+|++|+|.-
T Consensus        23 ~~~~RC~~--C~KKl~l~~~~~C-rCg~~FC~~HR~pe~H~Ctf   63 (85)
T d1wffa_          23 KIMKHCFL--CGKKTGLATSFEC-RCGNNFCASHRYAEAHGCNY   63 (85)
T ss_dssp             CCCCBCSS--SCCBCSSSSCEEC-TTCCEECTTTCSTGGGTCCS
T ss_pred             ccCCcChh--cCCeecCCcCeec-CCCCEehhhcCCCcCcCCCc
Confidence            34578999  9999877667999 59999999999999999983

>d1wfla_ g.80.1.1 (A:) Zinc finger A20 domain containing protein 2 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: AN1-like Zinc finger
superfamily: AN1-like Zinc finger
family: AN1-like Zinc finger
domain: Zinc finger A20 domain containing protein 2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.88  E-value=3.2e-06  Score=59.03  Aligned_cols=39  Identities=31%  Similarity=0.778  Sum_probs=33.4

Q ss_pred             CcCCCcCCCC-CcccccccCCcccccccCCCCcCCCcCCCCCc
Q 029499           12 GSHCQHQDCH-QLDFLPFKCDGCHKVFCFEHRSFKSHECPKSD   53 (192)
Q Consensus        12 G~hC~~~~C~-qlDFLPf~C~~C~~~FC~eHr~~~~H~C~~~~   53 (192)
                      -..|.  .|+ +|.+++|+|. |+++||..||.++.|+|.-..
T Consensus        25 ~~RC~--~C~KKl~l~~~~Cr-Cg~~FC~~HR~pe~H~CtfDy   64 (74)
T d1wfla_          25 KNRCF--MCRKKVGLTGFDCR-CGNLFCGLHRYSDKHNCPYDY   64 (74)
T ss_dssp             TTBCS--SSCCBCGGGCEECT-TSCEECSSSCSTTTTTCCCCG
T ss_pred             CCcCh--hhCCcccceeeEcc-CCCEehhhcCCCcCcCCCCcc
Confidence            35798  698 5678899995 999999999999999998544

>d1wffa_ g.80.1.1 (A:) ANUBL1 (AN1, ubiquitin-like, homolog) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: AN1-like Zinc finger
superfamily: AN1-like Zinc finger
family: AN1-like Zinc finger
domain: ANUBL1 (AN1, ubiquitin-like, homolog)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.87  E-value=4.3e-06  Score=59.74  Aligned_cols=47  Identities=32%  Similarity=0.706  Sum_probs=38.3

Q ss_pred             CccCCCccC----------cCCCcCCCCCcccc--cccCCcccccccCCCCcCCCcCCCCCc
Q 029499            4 GTEAFPDLG----------SHCQHQDCHQLDFL--PFKCDGCHKVFCFEHRSFKSHECPKSD   53 (192)
Q Consensus         4 g~~ef~diG----------~hC~~~~C~qlDFL--Pf~C~~C~~~FC~eHr~~~~H~C~~~~   53 (192)
                      |+.+.|.+.          ..|.  .|++.--|  +|+|. |++.||..||.++.|+|+-..
T Consensus         7 ~~~~~p~~~~~~~~kk~~~~RC~--~C~KKl~l~~~~~Cr-Cg~~FC~~HR~pe~H~CtfDy   65 (85)
T d1wffa_           7 GIHHLPPVKAPLQTKKKIMKHCF--LCGKKTGLATSFECR-CGNNFCASHRYAEAHGCNYDY   65 (85)
T ss_dssp             CCCCCCCCCCCCCCCCCCCCBCS--SSCCBCSSSSCEECT-TCCEECTTTCSTGGGTCCSCC
T ss_pred             ccccCCCccCCcccccccCCcCh--hcCCeecCCcCeecC-CCCEehhhcCCCcCcCCCcch
Confidence            566666655          5788  69987766  89996 999999999999999998533

>d1wfha_ g.80.1.1 (A:) Zinc finger A20 and AN1 domains containing protein At2g36320 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: AN1-like Zinc finger
superfamily: AN1-like Zinc finger
family: AN1-like Zinc finger
domain: Zinc finger A20 and AN1 domains containing protein At2g36320
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.56  E-value=2.4e-05  Score=53.09  Aligned_cols=42  Identities=29%  Similarity=0.640  Sum_probs=34.3

Q ss_pred             CccCcCCCcCCCCCc-ccccccCCcccccccCCCCcCCCcCCCCCc
Q 029499            9 PDLGSHCQHQDCHQL-DFLPFKCDGCHKVFCFEHRSFKSHECPKSD   53 (192)
Q Consensus         9 ~diG~hC~~~~C~ql-DFLPf~C~~C~~~FC~eHr~~~~H~C~~~~   53 (192)
                      +..-..|.  .|++. .+++|+|. |+++||..||.++.|+|+-..
T Consensus        12 ~~k~~RC~--~C~KKl~l~~~~Cr-Cg~~FC~~HR~pe~H~CtfDy   54 (64)
T d1wfha_          12 PQRPNRCT--VCRKRVGLTGFMCR-CGTTFCGSHRYPEVHGCTFDF   54 (64)
T ss_dssp             CSSCCCCT--TTCCCCCTTCEECS-SSCEECTTTCSTTTTTCCCCC
T ss_pred             CCCCCcCh--hhCCCccceeeecc-CCCEehhhcCCCcCcCCCCcc
Confidence            44556888  58865 56699996 999999999999999998544

>d1wfpa_ g.80.1.1 (A:) Zinc finger A20 and AN1 domains containing protein At1g12440 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: AN1-like Zinc finger
superfamily: AN1-like Zinc finger
family: AN1-like Zinc finger
domain: Zinc finger A20 and AN1 domains containing protein At1g12440
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.56  E-value=2.9e-05  Score=54.01  Aligned_cols=39  Identities=36%  Similarity=0.795  Sum_probs=32.1

Q ss_pred             CcCCCcCCCCC-cccccccCCcccccccCCCCcCCCcCCCCCc
Q 029499           12 GSHCQHQDCHQ-LDFLPFKCDGCHKVFCFEHRSFKSHECPKSD   53 (192)
Q Consensus        12 G~hC~~~~C~q-lDFLPf~C~~C~~~FC~eHr~~~~H~C~~~~   53 (192)
                      -..|.  .|++ |-++.|+|. |+++||..||.++.|+|+-..
T Consensus        25 k~RC~--~C~KKl~l~~~~Cr-Cg~~FC~~HR~pe~H~C~fDy   64 (74)
T d1wfpa_          25 ATRCL--SCNKKVGVTGFKCR-CGSTFCGTHRYPESHECQFDF   64 (74)
T ss_dssp             CCBCS--SSCCBCTTTCEECT-TSCEECTTTCSTTTSCCCSCT
T ss_pred             CCcCh--hcCCccCCCceecC-CCChhhhccCCccCcCCCCcc
Confidence            45688  5984 456679995 999999999999999998544

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.10  E-value=0.049  Score=30.10  Aligned_cols=13  Identities=46%  Similarity=1.037  Sum_probs=11.7

Q ss_pred             cccCCcccccccC
Q 029499           27 PFKCDGCHKVFCF   39 (192)
Q Consensus        27 Pf~C~~C~~~FC~   39 (192)
                      ||+|+.|+|.|-.
T Consensus         2 Py~C~eCgK~F~~   14 (26)
T d1x6ea2           2 PYKCLECGKAFSQ   14 (26)
T ss_dssp             CEECSSSCCEESS
T ss_pred             CccCCCCcCeecc
Confidence            8999999999964

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=85.35  E-value=0.11  Score=28.98  Aligned_cols=12  Identities=42%  Similarity=1.126  Sum_probs=10.3

Q ss_pred             cccCCccccccc
Q 029499           27 PFKCDGCHKVFC   38 (192)
Q Consensus        27 Pf~C~~C~~~FC   38 (192)
                      ||+|+.|++.|-
T Consensus         3 Py~C~~C~k~F~   14 (28)
T d1a1ia2           3 PFQCRICMRNFS   14 (28)
T ss_dssp             CEECTTTCCEES
T ss_pred             CccCCCCcCEec
Confidence            889999999884

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=85.16  E-value=0.12  Score=28.76  Aligned_cols=12  Identities=33%  Similarity=1.057  Sum_probs=9.1

Q ss_pred             cccCCccccccc
Q 029499           27 PFKCDGCHKVFC   38 (192)
Q Consensus        27 Pf~C~~C~~~FC   38 (192)
                      ||+|+.|++.|=
T Consensus         2 p~~C~~C~k~F~   13 (29)
T d2adra1           2 SFVCEVCTRAFA   13 (29)
T ss_dssp             CBCCTTTCCCBS
T ss_pred             cCCCCCCCCCCC
Confidence            778888887773

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.72  E-value=0.12  Score=30.19  Aligned_cols=13  Identities=38%  Similarity=0.963  Sum_probs=10.8

Q ss_pred             ccccCCccccccc
Q 029499           26 LPFKCDGCHKVFC   38 (192)
Q Consensus        26 LPf~C~~C~~~FC   38 (192)
                      =||+|+.|++.|=
T Consensus         7 kP~~C~~C~k~F~   19 (36)
T d2ct1a2           7 KPYECYICHARFT   19 (36)
T ss_dssp             CSEECTTTCCEES
T ss_pred             CCEeCCCCccccc
Confidence            4899999999884

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=83.47  E-value=0.14  Score=29.75  Aligned_cols=13  Identities=38%  Similarity=0.864  Sum_probs=11.0

Q ss_pred             ccccCCccccccc
Q 029499           26 LPFKCDGCHKVFC   38 (192)
Q Consensus        26 LPf~C~~C~~~FC   38 (192)
                      -||+|+.|++.|=
T Consensus         6 kPy~C~~C~k~F~   18 (35)
T d1srka_           6 RPFVCRICLSAFT   18 (35)
T ss_dssp             SCEECSSSCCEES
T ss_pred             ccccCCCCCCccc
Confidence            4899999999884

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.24  E-value=0.17  Score=29.65  Aligned_cols=14  Identities=43%  Similarity=0.949  Sum_probs=11.7

Q ss_pred             ccccCCcccccccC
Q 029499           26 LPFKCDGCHKVFCF   39 (192)
Q Consensus        26 LPf~C~~C~~~FC~   39 (192)
                      =||+|+.|++.|-.
T Consensus        11 kpy~C~~CgK~F~~   24 (38)
T d2cota2          11 RRYKCDECGKSFSH   24 (38)
T ss_dssp             CSSBCSSSCCBCSC
T ss_pred             CCEecCCCCceeeC
Confidence            38999999999853

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=80.56  E-value=0.24  Score=28.81  Aligned_cols=13  Identities=38%  Similarity=1.168  Sum_probs=10.9

Q ss_pred             ccccCCccccccc
Q 029499           26 LPFKCDGCHKVFC   38 (192)
Q Consensus        26 LPf~C~~C~~~FC   38 (192)
                      =||+|+.|++.|=
T Consensus        10 KPy~C~~C~k~F~   22 (37)
T d1p7aa_          10 KPFQCPDCDRSFS   22 (37)
T ss_dssp             SSBCCTTTCCCBS
T ss_pred             cCeEeCCCCCEec
Confidence            4899999999883