Citrus Sinensis ID: 029593

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-
Protein Sequence
MDSPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLRALGYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKIIFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHAVRQSSFLIFYFDFF
Secondary Structure (PSIPRED)
ccccccEEEEEccccccccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHcccccccccccHHHHHHHHHHccccEEEccccHHHHHHHHHHccccccccEEEEEcccccccccccccccccccccccHHHHHHHHHHccccccccccccEEEEEEcccc
Secondary Structure Prediction (SSPRO)
ccccccEEEEEcccccccccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHcccccHcccccHHHHHHHHHccccEEEEEcccHHHHHHHHHHcccHHHHHcEEEEEccccccccccccccccEEEcccHHHHHHHHHHccccHHHHHcccEEEEEEEccc
Coil and Loop (DISEMBL)
mdspfnclvfdlddtlypsetGIAAAVKRNIEGfliekcgfsetkASSLRVELFKAYGSTLAGLRALgydigaddyhgfvhgrlpydlikpdpqlRNLLCSITQRKIIFTNSDRNHAITCLKRLEIADCFDQIICFetmnpnlskatrpdefpvllkpSMDAMKLALHVAnvdprhavrqssfLIFYFDFF
Flexible Loop (DISEMBL)
MDSPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLRALGYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRkiiftnsdrnHAITCLKRLEIADCFDQIICFETmnpnlskatrPDEFPVLLKPSMDAMKLALHVANVDPRHAVRQSSFLIFYFDFF
Low Complexity Region (SEG)
MDSPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLRALGYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKIIFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHAVRQSSFLIFYFDFF
Disordered region (IsUnstruct)
****FNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLRALGYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKIIFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNL*******EFPVLLKPSMDAMKLALHVANVDPRHAVRQSSFLIFYFDF*
Disordered Region (DISOPRED)
**SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLRALGYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKIIFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHAVRQSSFLIFYFDFF
Disordered Region (DISEMBL)
MDSPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLRALGYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKIIFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHAVRQSSFLIFYFDFF
Disordered Region (DISPRO)
**SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLRALGYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKIIFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHAVRQSSFLIFYFDFF
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MDSPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLRALGYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKIIFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHAVRQSSFLIFYFDFF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	191	2.2.26 [Sep-21-2011]
P53078	280	Suppressor of disruption	yes	no	0.633	0.432	0.367	1e-12
Q09893	226	Uncharacterized protein C	yes	no	0.790	0.668	0.322	1e-11
P40025	321	Phosphate metabolism prot	no	no	0.649	0.386	0.325	5e-11

>sp|P53078|SDT1_YEAST Suppressor of disruption of TFIIS OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SDT1 PE=1 SV=1

 Score = 72.8 bits (177), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 47/128 (36%), Positives = 69/128 (53%), Gaps = 7/128 (5%)

Query: 10  FDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLRALGY 69
           FD+D+ LY S T I   ++++I  F       S   A  L    +K YG  + GL  + +
Sbjct: 60  FDIDNCLYKSSTRIHDLMQQSILRFFQTHLKLSPEDAHVLNNSYYKEYGLAIRGL-VMFH 118

Query: 70  DIGADDYHGFVHGRLPY-DLIKPDPQLRNLLCSITQ-----RKIIFTNSDRNHAITCLKR 123
            + A +Y+  V   LP  D++KPD  LRN+L  + Q     +  +FTN+ +NHAI CL+ 
Sbjct: 119 KVNALEYNRLVDDSLPLQDILKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRL 178

Query: 124 LEIADCFD 131
           L IAD FD
Sbjct: 179 LGIADLFD 186

Could be an enzyme that inactivates 6-azauracil by modifying it.
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|Q09893|YAI5_SCHPO Uncharacterized protein C24B11.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC24B11.05 PE=3 SV=1

 Score = 69.7 bits (169), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/155 (32%), Positives = 75/155 (48%), Gaps = 4/155 (2%)

Query: 8   LVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLRAL 67
           + FDLD+ LYP    I   +   I  F  +K G    +A  LR   ++ YG  + GL  L
Sbjct: 8   IFFDLDNCLYPKSYKIHNMMAARITAFFSDKLGIPTEEAERLREVYYRHYGIAIRGL-VL 66

Query: 68  GYDIGADDYHGFVHGRLPYD-LIKPDPQLRNLLCSITQRK--IIFTNSDRNHAITCLKRL 124
            ++I A DY   V   LP + +IK D  LR +L  + ++    IFTN+   HA   LK L
Sbjct: 67  HHEIDAVDYDQRVDQSLPLEKVIKKDEVLREMLLELRKKYKCWIFTNAYIVHANRVLKYL 126

Query: 125 EIADCFDQIICFETMNPNLSKATRPDEFPVLLKPS 159
            I DCFD I   +    +L     P+ +  +++ +
Sbjct: 127 GIEDCFDGITYCDYNAKDLIAKPMPEMYERVMREA 161

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|P40025|PHM8_YEAST Phosphate metabolism protein 8 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PHM8 PE=1 SV=1

 Score = 67.8 bits (164), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 43/132 (32%), Positives = 66/132 (50%), Gaps = 8/132 (6%)

Query: 10  FDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLRALGY 69
           FD+D+TLY   T +   +++++  F   + GF + +A  L    ++ YG ++ GL     
Sbjct: 57  FDIDNTLYRKSTKVQLLMQQSLSNFFKYELGFDDDEAERLIESYYQEYGLSVKGLIKNKQ 116

Query: 70  DIGADDYHGFVHGRLP-YDLIKPDPQLRN-------LLCSITQRKIIFTNSDRNHAITCL 121
                 Y+ F+   LP  D +KPD +LR               +  +FTNS +NHAI C+
Sbjct: 117 IDDVLQYNTFIDDSLPLQDYLKPDWKLRELLINLKKKKLGKFDKLWLFTNSYKNHAIRCV 176

Query: 122 KRLEIADCFDQI 133
           K L IAD FD I
Sbjct: 177 KILGIADLFDGI 188

May be involved in phosphate metabolism.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	191
224108057	266	predicted protein [Populus trichocarpa]	0.921	0.661	0.801	1e-77
255551455	264	Protein SSM1, putative [Ricinus communis	0.921	0.666	0.767	3e-77
224102047	266	predicted protein [Populus trichocarpa]	0.921	0.661	0.784	3e-76
118484991	266	unknown [Populus trichocarpa]	0.921	0.661	0.784	3e-76
388507830	264	unknown [Medicago truncatula]	0.921	0.666	0.767	4e-76
357444255	264	Phosphate metabolism protein [Medicago t	0.921	0.666	0.767	5e-76
27528429	262	putative phosphatase [Phaseolus vulgaris	0.921	0.671	0.75	3e-74
225432622	266	PREDICTED: phosphate metabolism protein	0.900	0.646	0.790	6e-74
147800883	257	hypothetical protein VITISV_036478 [Viti	0.858	0.638	0.792	8e-70
449444767	257	PREDICTED: uncharacterized protein C24B1	0.910	0.677	0.741	1e-69

>gi|224108057|ref|XP_002314706.1| predicted protein [Populus trichocarpa] gi|222863746|gb|EEF00877.1| predicted protein [Populus trichocarpa]

 Score =  294 bits (753), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 141/176 (80%), Positives = 156/176 (88%)

Query: 3   SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLA 62
           SPF+CL+FDLDDTLY S+ GIA A+++NI+ FL+EKCGF E KA S RVELFK+YGS+LA
Sbjct: 13  SPFDCLLFDLDDTLYSSKLGIAEALRKNIDEFLVEKCGFPENKAPSHRVELFKSYGSSLA 72

Query: 63  GLRALGYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKIIFTNSDRNHAITCLK 122
           GLRALGYDI ADDYH FVHGRLPYDLIKPD QLRNLL SITQRKIIFTNSDRNHAI  LK
Sbjct: 73  GLRALGYDIDADDYHSFVHGRLPYDLIKPDSQLRNLLRSITQRKIIFTNSDRNHAIMALK 132

Query: 123 RLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHAV 178
           RL I DCFDQIICFETMNPNLSK+T PDEFPVLLKPS+DAMK+AL VA+VDPR  +
Sbjct: 133 RLGIEDCFDQIICFETMNPNLSKSTSPDEFPVLLKPSVDAMKVALRVADVDPRRTL 188

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255551455|ref|XP_002516773.1| Protein SSM1, putative [Ricinus communis] gi|223543861|gb|EEF45387.1| Protein SSM1, putative [Ricinus communis]

 Score =  293 bits (750), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 135/176 (76%), Positives = 158/176 (89%)

Query: 3   SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLA 62
           SPF+CL+FDLDDTLY S+ GIA A+++NI+ FL+EKCGF++ KASSLRVELFK YGS+LA
Sbjct: 9   SPFDCLIFDLDDTLYSSKLGIAEALRKNIDDFLVEKCGFAQDKASSLRVELFKTYGSSLA 68

Query: 63  GLRALGYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKIIFTNSDRNHAITCLK 122
           GLRALGYDI ADDYH FVHGRLPYDLIKPD QLRN+L SI QRK+IFTNSDRNHA+  L+
Sbjct: 69  GLRALGYDIDADDYHSFVHGRLPYDLIKPDGQLRNILLSIPQRKLIFTNSDRNHAMKSLE 128

Query: 123 RLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHAV 178
           RL I DCFDQIICFETMNPNLS++TRPDEFPVLLKPS+DAMK+ALHVA+++P   +
Sbjct: 129 RLGIEDCFDQIICFETMNPNLSRSTRPDEFPVLLKPSIDAMKIALHVADINPSRTL 184

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224102047|ref|XP_002312525.1| predicted protein [Populus trichocarpa] gi|222852345|gb|EEE89892.1| predicted protein [Populus trichocarpa]

 Score =  290 bits (741), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 138/176 (78%), Positives = 154/176 (87%)

Query: 3   SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLA 62
           SPF+CL+FDLDDTLY S+ GIA A+++NI+ FL+E+CGFSE KA S+RVELFK YGS+LA
Sbjct: 13  SPFDCLLFDLDDTLYSSKLGIAEALRKNIDDFLVERCGFSEEKAPSIRVELFKTYGSSLA 72

Query: 63  GLRALGYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKIIFTNSDRNHAITCLK 122
           GLRALGY I ADDYH FVHGRLPYDLIKPD QL NLL SITQRKIIFTNSDRNHAI  LK
Sbjct: 73  GLRALGYGIDADDYHSFVHGRLPYDLIKPDSQLLNLLRSITQRKIIFTNSDRNHAIMALK 132

Query: 123 RLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHAV 178
           RL I DCFDQIICFETMNPNLSK++ PDEFPVLLKPSMDAMK+AL VA+VD R  +
Sbjct: 133 RLGIEDCFDQIICFETMNPNLSKSSSPDEFPVLLKPSMDAMKIALRVADVDLRRTL 188

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118484991|gb|ABK94360.1| unknown [Populus trichocarpa]

 Score =  289 bits (740), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 138/176 (78%), Positives = 154/176 (87%)

Query: 3   SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLA 62
           SPF+CL+FDLDDTLY S+ GIA A+++NI+ FL+E+CGFSE KA S+RVELFK YGS+LA
Sbjct: 13  SPFDCLLFDLDDTLYSSKLGIAEALRKNIDDFLVERCGFSEDKAPSIRVELFKTYGSSLA 72

Query: 63  GLRALGYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKIIFTNSDRNHAITCLK 122
           GLRALGY I ADDYH FVHGRLPYDLIKPD QL NLL SITQRKIIFTNSDRNHAI  LK
Sbjct: 73  GLRALGYGIDADDYHSFVHGRLPYDLIKPDSQLLNLLRSITQRKIIFTNSDRNHAIMALK 132

Query: 123 RLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHAV 178
           RL I DCFDQIICFETMNPNLSK++ PDEFPVLLKPSMDAMK+AL VA+VD R  +
Sbjct: 133 RLGIEDCFDQIICFETMNPNLSKSSSPDEFPVLLKPSMDAMKIALRVADVDLRRTL 188

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388507830|gb|AFK41981.1| unknown [Medicago truncatula]

 Score =  289 bits (739), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 135/176 (76%), Positives = 156/176 (88%)

Query: 3   SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLA 62
           SPF+C++FDLDDTLYPS TGI AAVK+NI+ FL+EKCGFS++KAS+LRVELFK++GSTLA
Sbjct: 8   SPFDCIIFDLDDTLYPSNTGIGAAVKKNIDLFLMEKCGFSQSKASTLRVELFKSHGSTLA 67

Query: 63  GLRALGYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKIIFTNSDRNHAITCLK 122
           GLRALGYDI A++YHGFVHGRLPY+LIKPD QLRNLL SI QRKIIFTNSDR HA+  L 
Sbjct: 68  GLRALGYDITAEEYHGFVHGRLPYELIKPDIQLRNLLRSINQRKIIFTNSDRIHALRALD 127

Query: 123 RLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHAV 178
           RL I DCF+QIICFET+NPNL  +TRPDEFPVLLKPS DA K+A+  ANVDPRH +
Sbjct: 128 RLGITDCFEQIICFETLNPNLPNSTRPDEFPVLLKPSPDAFKIAIQAANVDPRHTL 183

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357444255|ref|XP_003592405.1| Phosphate metabolism protein [Medicago truncatula] gi|217073866|gb|ACJ85293.1| unknown [Medicago truncatula] gi|355481453|gb|AES62656.1| Phosphate metabolism protein [Medicago truncatula] gi|388519543|gb|AFK47833.1| unknown [Medicago truncatula]

 Score =  288 bits (738), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 135/176 (76%), Positives = 156/176 (88%)

Query: 3   SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLA 62
           SPF+C++FDLDDTLYPS TGI AAVK+NI+ FL+EKCGFS++KAS+LRVELFK++GSTLA
Sbjct: 8   SPFDCIIFDLDDTLYPSNTGIGAAVKKNIDLFLMEKCGFSQSKASTLRVELFKSHGSTLA 67

Query: 63  GLRALGYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKIIFTNSDRNHAITCLK 122
           GLRALGYDI A++YHGFVHGRLPY+LIKPD QLRNLL SI QRKIIFTNSDR HA+  L 
Sbjct: 68  GLRALGYDITAEEYHGFVHGRLPYELIKPDIQLRNLLRSINQRKIIFTNSDRIHALRALD 127

Query: 123 RLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHAV 178
           RL I DCF+QIICFET+NPNL  +TRPDEFPVLLKPS DA K+A+  ANVDPRH +
Sbjct: 128 RLGITDCFEQIICFETLNPNLPNSTRPDEFPVLLKPSPDAFKIAIQAANVDPRHTL 183

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|27528429|emb|CAD57681.1| putative phosphatase [Phaseolus vulgaris]

 Score =  283 bits (723), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 132/176 (75%), Positives = 151/176 (85%)

Query: 3   SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLA 62
           SPF+ ++FDLDDTLYPS TGI   VKRNIE FLIEKCGFSE+KA+ LRVELFK YGSTLA
Sbjct: 8   SPFDAIIFDLDDTLYPSTTGIDRCVKRNIELFLIEKCGFSESKAAHLRVELFKTYGSTLA 67

Query: 63  GLRALGYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKIIFTNSDRNHAITCLK 122
           GLRALGYDI A++YH FVHGRLPYD IKPD QLRNLLC+I QRKI+FTNSDR HA+  L 
Sbjct: 68  GLRALGYDITAEEYHSFVHGRLPYDSIKPDVQLRNLLCTIKQRKIVFTNSDRIHAMRALD 127

Query: 123 RLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHAV 178
           RL I+DCF+QIICFET+NPNL  +TRPDEFPVLLKPS+DA ++AL  ANV+PR  +
Sbjct: 128 RLGISDCFEQIICFETINPNLPNSTRPDEFPVLLKPSLDAFRIALDAANVEPRRTL 183

Source: Phaseolus vulgaris

Species: Phaseolus vulgaris

Genus: Phaseolus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225432622|ref|XP_002281854.1| PREDICTED: phosphate metabolism protein 8 [Vitis vinifera] gi|297737030|emb|CBI26231.3| unnamed protein product [Vitis vinifera]

 Score =  282 bits (721), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 136/172 (79%), Positives = 150/172 (87%)

Query: 3   SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLA 62
           SPF+CLVFDLDDTLY S+TGI+ A KRNIE FL++KCGF ETKASSLRVELFK YGSTLA
Sbjct: 13  SPFDCLVFDLDDTLYHSKTGISEACKRNIEEFLVQKCGFGETKASSLRVELFKNYGSTLA 72

Query: 63  GLRALGYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKIIFTNSDRNHAITCLK 122
           GLRALGY+I ADDYH FVHGRLPY+LIKPD QLR+LL SI  RKII TNSDRNHAI  L 
Sbjct: 73  GLRALGYNIDADDYHSFVHGRLPYELIKPDSQLRSLLRSIALRKIILTNSDRNHAIKVLD 132

Query: 123 RLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDP 174
           RL + DCFDQIICFETMNPNL K+TR DEFPV+LKPS+DAMK+AL  ANV+P
Sbjct: 133 RLGLQDCFDQIICFETMNPNLPKSTRLDEFPVILKPSLDAMKIALDAANVNP 184

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147800883|emb|CAN62374.1| hypothetical protein VITISV_036478 [Vitis vinifera]

 Score =  268 bits (685), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 130/164 (79%), Positives = 142/164 (86%)

Query: 11  DLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLRALGYD 70
           DLDDTLY S+TGIA A KRNIE FL++KCGF ETKASSLRVELFK YGSTLAGLRALGY+
Sbjct: 12  DLDDTLYHSKTGIAEACKRNIEEFLVQKCGFGETKASSLRVELFKNYGSTLAGLRALGYN 71

Query: 71  IGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKIIFTNSDRNHAITCLKRLEIADCF 130
           I ADDYH FVHGRLPY+LIKPD QLR+LL SI  RKII TNSDRNHAI  L RL + DCF
Sbjct: 72  IDADDYHSFVHGRLPYELIKPDSQLRSLLRSIALRKIILTNSDRNHAIKVLDRLGLQDCF 131

Query: 131 DQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDP 174
           DQIICFETMNPNL K+TR DEFPV+LKPS+DAMK+AL  ANV+P
Sbjct: 132 DQIICFETMNPNLPKSTRLDEFPVILKPSLDAMKIALDAANVNP 175

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449444767|ref|XP_004140145.1| PREDICTED: uncharacterized protein C24B11.05-like [Cucumis sativus]

 Score =  267 bits (683), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 129/174 (74%), Positives = 144/174 (82%)

Query: 5   FNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGL 64
           F+CL+FDLDDTLYP  TGIA A K+NIE FLIEKCGF +T+A  LR ELFK YGSTLAGL
Sbjct: 5   FDCLIFDLDDTLYPFNTGIATACKKNIEDFLIEKCGFPKTQAPILRTELFKTYGSTLAGL 64

Query: 65  RALGYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKIIFTNSDRNHAITCLKRL 124
           RALGYDI ADDYHGFVHGRLPYD IK D QLR LL SI QRKIIFTNSD  HA   L RL
Sbjct: 65  RALGYDIKADDYHGFVHGRLPYDRIKQDFQLRRLLLSIPQRKIIFTNSDMIHATKALSRL 124

Query: 125 EIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHAV 178
            +  CF++IICFETMNPNL KATRP+EFP+LLKPS+DAM++AL VA+VDPR  +
Sbjct: 125 GLEGCFEKIICFETMNPNLPKATRPNEFPILLKPSLDAMRIALDVADVDPRRTL 178

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	191
TAIR|locus:2045422	263	AT2G32150 [Arabidopsis thalian	0.931	0.676	0.7	2e-65
TAIR|locus:2185223	280	AT5G02230 [Arabidopsis thalian	0.712	0.485	0.566	9.6e-44
TAIR|locus:2079522	249	AT3G62040 [Arabidopsis thalian	0.884	0.678	0.48	1.3e-43
TAIR|locus:2148343	282	AT5G59480 [Arabidopsis thalian	0.869	0.588	0.459	3.3e-40
TAIR|locus:2148358	266	AT5G59490 [Arabidopsis thalian	0.890	0.639	0.443	1.3e-38
DICTYBASE|DDB_G0293862	249	DDB_G0293862 "haloacid dehalog	0.643	0.493	0.370	8.6e-17
SGD|S000000839	321	PHM8 "Lysophosphatidic acid (L	0.649	0.386	0.348	1e-14
SGD|S000003192	280	SDT1 "Pyrimidine nucleotidase"	0.633	0.432	0.382	1.8e-14
UNIPROTKB|G4MVR5	238	MGG_01783 "Uncharacterized pro	0.738	0.592	0.326	4.4e-13
POMBASE|SPAC24B11.05	226	SPAC24B11.05 "pyrimidine 5'-nu	0.654	0.553	0.379	4.4e-13

TAIR|locus:2045422 AT2G32150 [Arabidopsis thaliana (taxid:3702)]

 Score = 666 (239.5 bits), Expect = 2.0e-65, P = 2.0e-65
 Identities = 126/180 (70%), Positives = 150/180 (83%)

Query:     1 MD-SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGS 59
             MD SP NCL+FDLDDTLYP +TGIA AVK+NI+ FL+EK GFSE+KASSLRVELFK YGS
Sbjct:     1 MDFSPINCLIFDLDDTLYPLKTGIAPAVKKNIDDFLVEKFGFSESKASSLRVELFKTYGS 60

Query:    60 TLAGLRALGYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKIIFTNSDRNHAIT 119
             TLAGLRALG+D+  D+YH FVHGRLPY  I+P+ +LRNLL  I QRKIIFTNSD+NHA+ 
Sbjct:    61 TLAGLRALGHDVHPDEYHSFVHGRLPYGSIEPNNKLRNLLNKIKQRKIIFTNSDKNHAVK 120

Query:   120 CLKRLEIADCFDQIICFETMNPNL-SKATRPDEFPVLLKPSMDAMKLALHVANVDPRHAV 178
              LK+L + DCF+++ICFETMNPNL    TRPDE+PV+LKPS+ AM + + VANVDPR  V
Sbjct:   121 VLKKLGLEDCFEEMICFETMNPNLFGSTTRPDEYPVVLKPSLTAMDICIRVANVDPRRTV 180

GO:0003824 "catalytic activity" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016787 "hydrolase activity" evidence=IEA;ISS

TAIR|locus:2185223 AT5G02230 [Arabidopsis thaliana (taxid:3702)]

 Score = 411 (149.7 bits), Expect = 9.6e-44, Sum P(2) = 9.6e-44
 Identities = 77/136 (56%), Positives = 99/136 (72%)

Query:     5 FNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGL 64
             ++CL+FDLDDTLYP  +GIA     NI+ ++ EK G  + K   L   L+K YG+T+AGL
Sbjct:    15 YDCLLFDLDDTLYPLSSGIARECGNNIKDYMTEKLGIPKDKIVELSDLLYKNYGTTMAGL 74

Query:    65 RALGYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKIIFTNSDRNHAITCLKRL 124
             RA+GY+   D+YH FVHGRLPYD IKPD  LR+LL S+  RK+IFTN+DR HA   LK+L
Sbjct:    75 RAIGYEFDYDEYHSFVHGRLPYDNIKPDLVLRSLLLSLPLRKVIFTNADRVHAAKALKKL 134

Query:   125 EIADCFDQIICFETMN 140
              + DCF+ IICFET+N
Sbjct:   135 GLEDCFEGIICFETLN 150

GO:0003824 "catalytic activity" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016787 "hydrolase activity" evidence=IEA;ISS

TAIR|locus:2079522 AT3G62040 [Arabidopsis thaliana (taxid:3702)]

 Score = 460 (167.0 bits), Expect = 1.3e-43, P = 1.3e-43
 Identities = 84/175 (48%), Positives = 122/175 (69%)

Query:     5 FNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGL 64
             + CL FD+DDTLYP   GI  A + NI+ F++ + G  E++   L ++L+K YG+T+AGL
Sbjct:     8 YECLFFDMDDTLYPLSIGINLACRNNIQEFMLNQLGIEESEVPKLCLDLYKEYGTTMAGL 67

Query:    65 RALGYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKIIFTNSDRNHAITCLKRL 124
             + +GY+   D++H +VHGRLPY+ +KPDP LRNLL S+  RKIIFTN+D+ HA   L RL
Sbjct:    68 KVMGYEFDNDEFHEYVHGRLPYEKLKPDPLLRNLLLSMPHRKIIFTNADKAHATRALNRL 127

Query:   125 EIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVAN-VDPRHAV 178
              + DCF+ IICFET+NP+    T+     +L KPS++A + A+ +A+ VDPR  +
Sbjct:   128 GLEDCFEGIICFETLNPSSDSNTQ-----ILCKPSVEAFEAAIRIADIVDPRKTI 177

GO:0005634 "nucleus" evidence=ISM

GO:0016787 "hydrolase activity" evidence=IEA;ISS

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

TAIR|locus:2148343 AT5G59480 [Arabidopsis thaliana (taxid:3702)]

 Score = 428 (155.7 bits), Expect = 3.3e-40, P = 3.3e-40
 Identities = 79/172 (45%), Positives = 120/172 (69%)

Query:     2 DSPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTL 61
             ++ ++CL+FD+DDTLYP  +G+A  VK+NI+ ++++K G  E K   L + L+K YG+T+
Sbjct:    12 EAKYDCLLFDIDDTLYPLSSGLAMEVKKNIQEYMVQKLGIEEDKVQELCLSLYKIYGTTM 71

Query:    62 AGLRALGYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKIIFTNSDRNHAITCL 121
             AGL+A+GYD   DD+H FVHGRLPY  +KPDP LRN++ S+  RK++FTN+D+ HA   +
Sbjct:    72 AGLKAVGYDFDYDDFHRFVHGRLPYSTLKPDPILRNIILSLPIRKVVFTNADKAHAAKII 131

Query:   122 KRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVD 173
              RL +  CF++II FET+NP ++K     E PV  K + +   +  ++AN D
Sbjct:   132 ARLGLEGCFEKIISFETLNP-ITKT----ESPVDTK-TREIFDIISYMANPD 177

GO:0005634 "nucleus" evidence=ISM

GO:0016787 "hydrolase activity" evidence=IEA;ISS

GO:0015824 "proline transport" evidence=RCA

TAIR|locus:2148358 AT5G59490 [Arabidopsis thaliana (taxid:3702)]

 Score = 413 (150.4 bits), Expect = 1.3e-38, P = 1.3e-38
 Identities = 78/176 (44%), Positives = 116/176 (65%)

Query:     5 FNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGL 64
             + CL+FDLDDTLYP  +G++ A   NI  +++EK G  E     L   L+K YG+++AGL
Sbjct:    11 YECLLFDLDDTLYPLSSGLSDACSNNIIEYMVEKLGIDEDGVVELNQILYKKYGTSMAGL 70

Query:    65 RALGYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKIIFTNSDRNHAITCLKRL 124
             +A+GY+   D+YH +VHGRLPY+ +KPDP LR+LL  +  RK++F+N D  H +  L RL
Sbjct:    71 KAVGYEFDNDEYHRYVHGRLPYENLKPDPVLRSLLLGLPLRKLVFSNGDEVHVMKALTRL 130

Query:   125 EIADCFDQIICFETMNPNLSKATRP------DEFPVLLKPSMDAMKLALHVANVDP 174
              I DCF++II FET+NP++++A          E PV+ KP+  A + A  +A ++P
Sbjct:   131 GIEDCFERIISFETLNPDINEAELSCVTGHLPENPVICKPTEIAFEKAFDIAQLNP 186

GO:0005634 "nucleus" evidence=ISM

GO:0016787 "hydrolase activity" evidence=IEA;ISS

DICTYBASE|DDB_G0293862 DDB_G0293862 "haloacid dehalogenase-like hydrolase" [Dictyostelium discoideum (taxid:44689)]

 Score = 207 (77.9 bits), Expect = 8.6e-17, P = 8.6e-17
 Identities = 47/127 (37%), Positives = 68/127 (53%)

Query:     8 LVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLRAL 67
             L+FDLD+TLYP   G+AA V   I  ++         +   +R   +K YG TL GL  +
Sbjct:    24 LLFDLDNTLYPKSCGLAAQVSNRITQYMSIILNLPMEEVDKVRNHYYKTYGLTLKGLM-M 82

Query:    68 GYDIGADDYHGFVHGRLPYDL-IKPDPQLRNLLCSITQ--RKIIFTNSDRNHAITCLKRL 124
              +++  D Y  +VHG L     +KPD +L   L S+    +K+IF+N+D  H     + L
Sbjct:    83 NHEVNIDKYLDYVHGGLDLKSHLKPDARLHACLKSVKSGVKKVIFSNADIGHCKRVTREL 142

Query:   125 EIADCFD 131
             EI DCFD
Sbjct:   143 EIDDCFD 149

GO:0016787 "hydrolase activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

SGD|S000000839 PHM8 "Lysophosphatidic acid (LPA) phosphatase involved in LPA hydrolysis" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 190 (71.9 bits), Expect = 1.0e-14, P = 1.0e-14
 Identities = 46/132 (34%), Positives = 73/132 (55%)

Query:    10 FDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLRALGY 69
             FD+D+TLY   T +   +++++  F   + GF + +A  L    ++ YG ++ GL     
Sbjct:    57 FDIDNTLYRKSTKVQLLMQQSLSNFFKYELGFDDDEAERLIESYYQEYGLSVKGLIKNKQ 116

Query:    70 DIGADDYHGFVHGRLPY-DLIKPDPQLRNLLCSITQRKI-------IFTNSDRNHAITCL 121
                   Y+ F+   LP  D +KPD +LR LL ++ ++K+       +FTNS +NHAI C+
Sbjct:   117 IDDVLQYNTFIDDSLPLQDYLKPDWKLRELLINLKKKKLGKFDKLWLFTNSYKNHAIRCV 176

Query:   122 KRLEIADCFDQI 133
             K L IAD FD I
Sbjct:   177 KILGIADLFDGI 188

GO:0016787 "hydrolase activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=IDA

GO:0016036 "cellular response to phosphate starvation" evidence=IEP;IMP

GO:0005634 "nucleus" evidence=IDA

GO:0052642 "lysophosphatidic acid phosphatase activity" evidence=IMP;IDA

SGD|S000003192 SDT1 "Pyrimidine nucleotidase" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 185 (70.2 bits), Expect = 1.8e-14, P = 1.8e-14
 Identities = 49/128 (38%), Positives = 70/128 (54%)

Query:    10 FDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLRALGY 69
             FD+D+ LY S T I   ++++I  F       S   A  L    +K YG  + GL  + +
Sbjct:    60 FDIDNCLYKSSTRIHDLMQQSILRFFQTHLKLSPEDAHVLNNSYYKEYGLAIRGL-VMFH 118

Query:    70 DIGADDYHGFVHGRLPY-DLIKPDPQLRNLLCSITQR-KI----IFTNSDRNHAITCLKR 123
              + A +Y+  V   LP  D++KPD  LRN+L  + Q  KI    +FTN+ +NHAI CL+ 
Sbjct:   119 KVNALEYNRLVDDSLPLQDILKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRL 178

Query:   124 LEIADCFD 131
             L IAD FD
Sbjct:   179 LGIADLFD 186

GO:0016787 "hydrolase activity" evidence=IEA

GO:0008252 "nucleotidase activity" evidence=IDA

GO:0005575 "cellular_component" evidence=ND

GO:0006206 "pyrimidine nucleobase metabolic process" evidence=IMP

UNIPROTKB|G4MVR5 MGG_01783 "Uncharacterized protein" [Magnaporthe oryzae 70-15 (taxid:242507)]

 Score = 172 (65.6 bits), Expect = 4.4e-13, P = 4.4e-13
 Identities = 48/147 (32%), Positives = 72/147 (48%)

Query:     4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAG 63
             P     FD+D+ LYP    +   +   I+ +  E    S  +A  L  E ++ YG  + G
Sbjct:    15 PTKIFFFDIDNCLYPKSAKVHDRMADLIDKYFAEHLSLSWDEAVRLHKEYYQNYGLAIEG 74

Query:    64 LRALGYDIGADDYHGFVHGRLPYD-LIKPDPQLRNLLCSITQRKI---IFTNSDRNHAIT 119
             L    + I   +Y+  V   LP + +IKP+PQLR +L  I + K+   +FTN+  NHA  
Sbjct:    75 L-VRHHQIDPLEYNSKVDDALPLEGIIKPNPQLRKMLEDIDRSKVKLWLFTNAYVNHARR 133

Query:   120 CLKRLEIADCFDQII-CFETMNPNLSK 145
              ++ LEI D FD I  C     P + K
Sbjct:   134 VVRLLEIEDLFDGITYCDYAAQPLVCK 160

GO:0005575 "cellular_component" evidence=ND

POMBASE|SPAC24B11.05 SPAC24B11.05 "pyrimidine 5'-nucleotidase (predicted)" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 172 (65.6 bits), Expect = 4.4e-13, P = 4.4e-13
 Identities = 49/129 (37%), Positives = 66/129 (51%)

Query:     8 LVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLRAL 67
             + FDLD+ LYP    I   +   I  F  +K G    +A  LR   ++ YG  + GL  L
Sbjct:     8 IFFDLDNCLYPKSYKIHNMMAARITAFFSDKLGIPTEEAERLREVYYRHYGIAIRGL-VL 66

Query:    68 GYDIGADDYHGFVHGRLPYD-LIKPDPQLRNLLCSITQR-KI-IFTNSDRNHAITCLKRL 124
              ++I A DY   V   LP + +IK D  LR +L  + ++ K  IFTN+   HA   LK L
Sbjct:    67 HHEIDAVDYDQRVDQSLPLEKVIKKDEVLREMLLELRKKYKCWIFTNAYIVHANRVLKYL 126

Query:   125 EIADCFDQI 133
              I DCFD I
Sbjct:   127 GIEDCFDGI 135

GO:0005634 "nucleus" evidence=ISO;IDA

GO:0005737 "cytoplasm" evidence=ISO

GO:0005829 "cytosol" evidence=IDA

GO:0006206 "pyrimidine nucleobase metabolic process" evidence=ISO

GO:0008252 "nucleotidase activity" evidence=ISO

GO:0047405 "pyrimidine-5'-nucleotide nucleosidase activity" evidence=NAS

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: grail3.0006002201 hypothetical protein (266 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	191
TIGR01993	183	TIGR01993, Pyr-5-nucltdase, pyrimidine 5'-nucleoti	1e-69
COG1011	229	COG1011, COG1011, Predicted hydrolase (HAD superfa	4e-14
TIGR01509	177	TIGR01509, HAD-SF-IA-v3, haloacid dehalogenase sup	4e-14
TIGR02253	221	TIGR02253, CTE7, HAD superfamily (subfamily IA) hy	3e-11
pfam13419	176	pfam13419, HAD_2, Haloacid dehalogenase-like hydro	5e-08

>gnl|CDD|233675 TIGR01993, Pyr-5-nucltdase, pyrimidine 5'-nucleotidase

 Score =  209 bits (534), Expect = 1e-69
 Identities = 86/172 (50%), Positives = 106/172 (61%), Gaps = 12/172 (6%)

Query: 7   CLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLRA 66
              FDLD+TLYP   GI   + RNI  F+  +   S  +A  LR + +K YG+TLAGL  
Sbjct: 2   VWFFDLDNTLYPHSAGIFLQIDRNITEFVAARLKLSPEEARVLRKDYYKEYGTTLAGLMI 61

Query: 67  LGYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKIIFTNSDRNHAITCLKRLEI 126
           L ++I AD+Y  +VHGRLPYD +KPDP+LRNLL  +  RKIIFTN DR HA   L+RL I
Sbjct: 62  L-HEIDADEYLRYVHGRLPYDKLKPDPELRNLLLRLPGRKIIFTNGDRAHARRALRRLGI 120

Query: 127 ADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHAV 178
            DCFD I CF+T NP+L           L KPS  A + AL  A VDP  A+
Sbjct: 121 EDCFDGIFCFDTANPDL-----------LPKPSPQAYEKALREAGVDPERAI 161

This family of proteins includes the SDT1/SSM1 gene from yeast which has been shown to code for a pyrimidine (UMP/CMP) 5'nucleotidase. The family spans plants, fungi and a small number of bacteria. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). Length = 183

>gnl|CDD|223943 COG1011, COG1011, Predicted hydrolase (HAD superfamily) [General function prediction only]

 Score = 67.6 bits (165), Expect = 4e-14
 Identities = 44/183 (24%), Positives = 66/183 (36%), Gaps = 26/183 (14%)

Query: 8   LVFDLDDTLYPSETGIAAAV-----KRNIEGFLIEKCGFS---ETKASSLRVELFKAYGS 59
           ++FDLD TL   ++    AV     +  +   L E        + +A  LR E    YG 
Sbjct: 7   ILFDLDGTLLDFDSAEFRAVLAEFAEIGVPETLEELALLKLIEKLEARFLRGEYTGEYGL 66

Query: 60  TLAGLRALGYDIGADDYHGFVHGRLPY--DLIKPDPQLRNLL--CSITQRKIIFTNSDRN 115
           TL  L  L   +  D+    V   L     L+   P+    L       +  I TN  R 
Sbjct: 67  TLERLLELLERLLGDEDAELVEELLAALAKLLPDYPEALEALKELGKKYKLGILTNGARP 126

Query: 116 HAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPR 175
           H    L++L + D FD +   E +               + KP  +  + AL    V P 
Sbjct: 127 HQERKLRQLGLLDYFDAVFISEDVG--------------VAKPDPEIFEYALEKLGVPPE 172

Query: 176 HAV 178
            A+
Sbjct: 173 EAL 175

Length = 229

>gnl|CDD|233443 TIGR01509, HAD-SF-IA-v3, haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED

 Score = 66.7 bits (163), Expect = 4e-14
 Identities = 43/176 (24%), Positives = 64/176 (36%), Gaps = 25/176 (14%)

Query: 7   CLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKA-YGSTLAGLR 65
            ++FDLD  L  +   IA  V R     + ++ G SE  +  L +  +KA YG T++   
Sbjct: 1   AVLFDLDGVLVDTAHAIAKLVDRAEFPLVPDELGVSEVGSLELALRRWKAKYGRTMSAED 60

Query: 66  ALGYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQR---KIIFTNSDRNHAITCLK 122
           A            F         +KP P +R LL ++  R     + TNS R  A   + 
Sbjct: 61  AQLL-----YKQLFYEALEKE-GLKPLPGVRALLEALRARGKKLALLTNSPRADAKL-VL 113

Query: 123 RLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHAV 178
            L +   FD +I                    L KP  D    AL    + P   +
Sbjct: 114 ELGLRALFDVVIDSSD--------------VGLGKPDPDIYLQALKKLGLKPSECL 155

This model represents part of one structural subfamily of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The superfamily is defined by the presence of three short catalytic motifs. The subfamilies are defined based on the location and the observed or predicted fold of a so-called "capping domain", or the absence of such a domain. Subfamily I consists of sequences in which the capping domain is found in between the first and second catalytic motifs. Subfamily II consists of sequences in which the capping domain is found between the second and third motifs. Subfamily III sequences have no capping domain in either of these positions.The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that representing it with a single model is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only one of the variants each. Variant 3 (this model) is found in the enzymes beta-phosphoglucomutase (TIGR01990) and deoxyglucose-6-phosphatase, while many other enzymes of subfamily IA exhibit this variant as well as variant 1 (TIGR01549). These three variant models were created withthe knowledge that there will be overlap among them - this is by design and serves the purpose of eliminating the overlap with models of more distantly relatedHAD subfamilies caused by an overly broad single model [Unknown function, Enzymes of unknown specificity]. Length = 177

>gnl|CDD|162787 TIGR02253, CTE7, HAD superfamily (subfamily IA) hydrolase, TIGR02253

 Score = 59.7 bits (145), Expect = 3e-11
 Identities = 49/180 (27%), Positives = 71/180 (39%), Gaps = 26/180 (14%)

Query: 10  FDLDDTLYPSETGIAAAVKRNIEGFLIEKCGF-SETKASSLRVELFKAYGSTLAG----- 63
           FDLDDTL  +  G+A   +RN    LIE        +A    ++L K YGS         
Sbjct: 7   FDLDDTLIDTS-GLAEKARRNAIEVLIEAGLNVDFEEAYEELLKLIKEYGSNYPTHFDYL 65

Query: 64  LRALGYDIGADDYHGFV--HGRLPYDLIKPDPQLRNLLCSITQ---RKIIFTNSDRNHAI 118
           +R L  +        FV  + +L +  ++  P +R+ L  + +   R  I T+       
Sbjct: 66  IRRLWEEYNPKLVAAFVYAYHKLKFAYLRVYPGVRDTLMELRESGYRLGIITDGLPVKQW 125

Query: 119 TCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHAV 178
             L+RL + D FD +I            T  +E  V  KP       AL    V P  AV
Sbjct: 126 EKLERLGVRDFFDAVI------------TS-EEEGV-EKPHPKIFYAALKRLGVKPEEAV 171

This family of sequences from archaea and metazoans includes the human uncharacterized protein CTE7. Pyrococcus species appear to have three different forms of this enzyme, so it is unclear whether all members of this family have the same function. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Length = 221

>gnl|CDD|222115 pfam13419, HAD_2, Haloacid dehalogenase-like hydrolase

 Score = 50.0 bits (120), Expect = 5e-08
 Identities = 35/174 (20%), Positives = 63/174 (36%), Gaps = 23/174 (13%)

Query: 8   LVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLRAL 67
           ++FDLD TL   +  I  A++        E+ G   + A  LR      +   LA L   
Sbjct: 1   IIFDLDGTLIDFDPVIFEALRD----LAAERLGLDIS-AEELREAGGLPFDEALADLLRE 55

Query: 68  GYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQ---RKIIFTNSDRNHAITCLKRL 124
            + I  D+    +        ++P P +  LL  +     + +I +N  R      L++L
Sbjct: 56  -HPIDPDEILEALLEYNLESRLEPFPDVVELLRRLKAKGVKLVILSNGSREAVERLLEKL 114

Query: 125 EIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHAV 178
            + D FD +   + +                 KP  +A +  L    + P   +
Sbjct: 115 GLLDLFDAVFTSDDVGAR--------------KPDPEAYERVLERLGLPPEEIL 154

Length = 176

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	191
KOG3109	244	consensus Haloacid dehalogenase-like hydrolase [Ge	99.96
TIGR01993	184	Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These	99.95
PRK13288	214	pyrophosphatase PpaX; Provisional	99.93
PRK13226	229	phosphoglycolate phosphatase; Provisional	99.93
PLN02770	248	haloacid dehalogenase-like hydrolase family protei	99.93
PRK14988	224	GMP/IMP nucleotidase; Provisional	99.92
PRK10725	188	fructose-1-P/6-phosphogluconate phosphatase; Provi	99.92
PRK11587	218	putative phosphatase; Provisional	99.92
COG0637	221	Predicted phosphatase/phosphohexomutase [General f	99.92
TIGR02253	221	CTE7 HAD superfamily (subfamily IA) hydrolase, TIG	99.92
PLN03243	260	haloacid dehalogenase-like hydrolase; Provisional	99.92
COG0546	220	Gph Predicted phosphatases [General function predi	99.92
PRK10826	222	2-deoxyglucose-6-phosphatase; Provisional	99.92
PLN02575	381	haloacid dehalogenase-like hydrolase	99.92
TIGR03351	220	PhnX-like phosphonatase-like hydrolase. This clade	99.91
TIGR01449	213	PGP_bact 2-phosphoglycolate phosphatase, prokaryot	99.91
TIGR02009	185	PGMB-YQAB-SF beta-phosphoglucomutase family hydrol	99.91
TIGR01422	253	phosphonatase phosphonoacetaldehyde hydrolase. Thi	99.91
PRK10563	221	6-phosphogluconate phosphatase; Provisional	99.9
TIGR01428	198	HAD_type_II 2-haloalkanoic acid dehalogenase, type	99.9
PLN02940	382	riboflavin kinase	99.9
TIGR01990	185	bPGM beta-phosphoglucomutase. The enzyme from L. l	99.9
TIGR01454	205	AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes	99.9
PRK13478	267	phosphonoacetaldehyde hydrolase; Provisional	99.9
PRK13222	226	phosphoglycolate phosphatase; Provisional	99.89
PRK13223	272	phosphoglycolate phosphatase; Provisional	99.89
TIGR01548	197	HAD-SF-IA-hyp1 haloacid dehalogenase superfamily,	99.89
TIGR02252	203	DREG-2 REG-2-like, HAD superfamily (subfamily IA)	99.89
TIGR02254	224	YjjG/YfnB HAD superfamily (subfamily IA) hydrolase	99.89
PRK13225	273	phosphoglycolate phosphatase; Provisional	99.88
PRK09449	224	dUMP phosphatase; Provisional	99.87
PF13419	176	HAD_2: Haloacid dehalogenase-like hydrolase; PDB:	99.87
TIGR01493	175	HAD-SF-IA-v2 Haloacid dehalogenase superfamily, su	99.87
PLN02779	286	haloacid dehalogenase-like hydrolase family protei	99.87
PRK06698	459	bifunctional 5'-methylthioadenosine/S-adenosylhomo	99.86
TIGR01549	154	HAD-SF-IA-v1 haloacid dehalogenase superfamily, su	99.86
TIGR02247	211	HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li	99.86
TIGR01509	183	HAD-SF-IA-v3 haloacid dehalogenase superfamily, su	99.85
COG1011	229	Predicted hydrolase (HAD superfamily) [General fun	99.85
PRK10748	238	flavin mononucleotide phosphatase; Provisional	99.85
PRK09456	199	?-D-glucose-1-phosphatase; Provisional	99.84
TIGR00338	219	serB phosphoserine phosphatase SerB. Phosphoserine	99.83
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	99.83
PHA02597	197	30.2 hypothetical protein; Provisional	99.79
TIGR01491	201	HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa	99.79
KOG2914	222	consensus Predicted haloacid-halidohydrolase and r	99.77
PLN02954	224	phosphoserine phosphatase	99.76
KOG3085	237	consensus Predicted hydrolase (HAD superfamily) [G	99.75
PRK11133	322	serB phosphoserine phosphatase; Provisional	99.75
PLN02811	220	hydrolase	99.75
PRK09552	219	mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp	99.74
TIGR01489	188	DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent	99.72
PRK13582	205	thrH phosphoserine phosphatase; Provisional	99.71
TIGR01681	128	HAD-SF-IIIC HAD-superfamily phosphatase, subfamily	99.69
TIGR01488	177	HAD-SF-IB Haloacid Dehalogenase superfamily, subfa	99.69
TIGR01656	147	Histidinol-ppas histidinol-phosphate phosphatase f	99.68
TIGR01691	220	enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen	99.67
PRK08942	181	D,D-heptose 1,7-bisphosphate phosphatase; Validate	99.67
COG0560	212	SerB Phosphoserine phosphatase [Amino acid transpo	99.65
TIGR01685	174	MDP-1 magnesium-dependent phosphatase-1. This mode	99.64
TIGR02137	203	HSK-PSP phosphoserine phosphatase/homoserine phosp	99.64
TIGR01662	132	HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I	99.64
cd01427	139	HAD_like Haloacid dehalogenase-like hydrolases. Th	99.63
PRK06769	173	hypothetical protein; Validated	99.63
TIGR03333	214	salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl	99.62
TIGR01672	237	AphA HAD superfamily (subfamily IIIB) phosphatase,	99.6
TIGR00213	176	GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase	99.6
TIGR01490	202	HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol	99.6
TIGR01261	161	hisB_Nterm histidinol-phosphatase. This model desc	99.59
PF00702	215	Hydrolase: haloacid dehalogenase-like hydrolase; I	99.58
TIGR01664	166	DNA-3'-Pase DNA 3'-phosphatase. The central phosph	99.58
PF06888	234	Put_Phosphatase: Putative Phosphatase; InterPro: I	99.57
TIGR01686	320	FkbH FkbH-like domain. The C-terminal portion of t	99.5
COG2179	175	Predicted hydrolase of the HAD superfamily [Genera	99.49
TIGR01670	154	YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho	99.45
PRK05446	354	imidazole glycerol-phosphate dehydratase/histidino	99.38
TIGR01452	279	PGP_euk phosphoglycolate/pyridoxal phosphate phosp	99.38
TIGR01668	170	YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph	99.36
KOG1615	227	consensus Phosphoserine phosphatase [Amino acid tr	99.35
PRK11009	237	aphA acid phosphatase/phosphotransferase; Provisio	99.35
KOG3120	256	consensus Predicted haloacid dehalogenase-like hyd	99.35
PRK11590	211	hypothetical protein; Provisional	99.35
TIGR01544	277	HAD-SF-IE haloacid dehalogenase superfamily, subfa	99.34
PHA02530	300	pseT polynucleotide kinase; Provisional	99.32
TIGR01458	257	HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr	99.31
smart00577	148	CPDc catalytic domain of ctd-like phosphatases.	99.28
TIGR01663	526	PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase	99.28
TIGR01533	266	lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil	99.24
PRK08238	479	hypothetical protein; Validated	99.23
PLN02645	311	phosphoglycolate phosphatase	99.22
PRK01158	230	phosphoglycolate phosphatase; Provisional	99.22
COG0241	181	HisB Histidinol phosphatase and related phosphatas	99.21
TIGR01457	249	HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr	99.21
PRK10530	272	pyridoxal phosphate (PLP) phosphatase; Provisional	99.19
TIGR01459	242	HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas	99.13
PF12710	192	HAD: haloacid dehalogenase-like hydrolase; PDB: 3P	99.13
PRK10444	248	UMP phosphatase; Provisional	99.12
COG4229	229	Predicted enolase-phosphatase [Energy production a	99.07
TIGR02244	343	HAD-IG-Ncltidse HAD superfamily (subfamily IG) hyd	99.06
TIGR01545	210	YfhB_g-proteo haloacid dehalogenase superfamily, s	99.05
TIGR02726	169	phenyl_P_delta phenylphosphate carboxylase, delta	99.05
TIGR01482	225	SPP-subfamily Sucrose-phosphate phosphatase subfam	98.99
TIGR01487	215	SPP-like sucrose-phosphate phosphatase-like hydrol	98.98
TIGR01684	301	viral_ppase viral phosphatase. These proteins also	98.96
COG0561	264	Cof Predicted hydrolases of the HAD superfamily [G	98.95
KOG2882	306	consensus p-Nitrophenyl phosphatase [Inorganic ion	98.95
PRK00192	273	mannosyl-3-phosphoglycerate phosphatase; Reviewed	98.95
TIGR02463	221	MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r	98.93
PRK15126	272	thiamin pyrimidine pyrophosphate hydrolase; Provis	98.92
PHA03398	303	viral phosphatase superfamily protein; Provisional	98.9
PRK10513	270	sugar phosphate phosphatase; Provisional	98.9
COG0647	269	NagD Predicted sugar phosphatases of the HAD super	98.87
PF12689	169	Acid_PPase: Acid Phosphatase; InterPro: IPR010036	98.85
PRK10976	266	putative hydrolase; Provisional	98.84
PRK09484	183	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	98.82
PRK03669	271	mannosyl-3-phosphoglycerate phosphatase; Reviewed	98.81
KOG3040	262	consensus Predicted sugar phosphatase (HAD superfa	98.74
PF08645	159	PNK3P: Polynucleotide kinase 3 phosphatase; InterP	98.74
TIGR01460	236	HAD-SF-IIA Haloacid Dehalogenase Superfamily Class	98.74
TIGR01459	242	HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas	98.73
COG4996	164	Predicted phosphatase [General function prediction	98.72
PLN02887	580	hydrolase family protein	98.67
PTZ00445	219	p36-lilke protein; Provisional	98.62
TIGR00099	256	Cof-subfamily Cof subfamily of IIB subfamily of ha	98.6
COG4359	220	Uncharacterized conserved protein [Function unknow	98.59
PF08282	254	Hydrolase_3: haloacid dehalogenase-like hydrolase;	98.56
PF09419	168	PGP_phosphatase: Mitochondrial PGP phosphatase; In	98.56
TIGR02471	236	sucr_syn_bact_C sucrose phosphate synthase, sucros	98.54
TIGR01485	249	SPP_plant-cyano sucrose-6F-phosphate phosphohydrol	98.53
TIGR02251	162	HIF-SF_euk Dullard-like phosphatase domain. This d	98.45
TIGR02461	225	osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat	98.4
PF13242	75	Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OY	98.4
TIGR01675	229	plant-AP plant acid phosphatase. This model explic	98.38
PF03767	229	Acid_phosphat_B: HAD superfamily, subfamily IIIB (	98.37
TIGR01525	556	ATPase-IB_hvy heavy metal translocating P-type ATP	98.36
TIGR01486	256	HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph	98.34
COG2503	274	Predicted secreted acid phosphatase [General funct	98.31
PRK12702	302	mannosyl-3-phosphoglycerate phosphatase; Reviewed	98.26
TIGR01511	562	ATPase-IB1_Cu copper-(or silver)-translocating P-t	98.23
TIGR01512	536	ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo	98.18
PLN02177	497	glycerol-3-phosphate acyltransferase	98.15
TIGR01680	275	Veg_Stor_Prot vegetative storage protein. The prot	98.15
PRK14502	694	bifunctional mannosyl-3-phosphoglycerate synthase/	98.09
TIGR01522	884	ATPase-IIA2_Ca golgi membrane calcium-translocatin	98.02
PRK10187	266	trehalose-6-phosphate phosphatase; Provisional	98.02
COG1778	170	Low specificity phosphatase (HAD superfamily) [Gen	98.01
PF05152	297	DUF705: Protein of unknown function (DUF705); Inte	97.98
PF05116	247	S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter	97.96
smart00775	157	LNS2 LNS2 domain. This domain is found in Saccharo	97.81
PF11019	252	DUF2608: Protein of unknown function (DUF2608); In	97.81
PRK10671	834	copA copper exporting ATPase; Provisional	97.8
COG3882	574	FkbH Predicted enzyme involved in methoxymalonyl-A	97.79
TIGR01456	321	CECR5 HAD-superfamily class IIA hydrolase, TIGR014	97.73
COG2217	713	ZntA Cation transport ATPase [Inorganic ion transp	97.69
PF06941	191	NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosol	97.67
PTZ00174	247	phosphomannomutase; Provisional	97.67
TIGR02250	156	FCP1_euk FCP1-like phosphatase, phosphatase domain	97.58
PRK14010	673	potassium-transporting ATPase subunit B; Provision	97.53
PRK01122	679	potassium-transporting ATPase subunit B; Provision	97.48
PRK11033	741	zntA zinc/cadmium/mercury/lead-transporting ATPase	97.45
TIGR01497	675	kdpB K+-transporting ATPase, B subunit. One sequen	97.44
TIGR01116	917	ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium	97.37
KOG0207	951	consensus Cation transport ATPase [Inorganic ion t	97.25
TIGR01647	755	ATPase-IIIA_H plasma-membrane proton-efflux P-type	97.21
COG4087	152	Soluble P-type ATPase [General function prediction	97.21
PF05761	448	5_nucleotid: 5' nucleotidase family; InterPro: IPR	97.16
PRK10517	902	magnesium-transporting ATPase MgtA; Provisional	97.07
PRK15122	903	magnesium-transporting ATPase; Provisional	97.03
TIGR01524	867	ATPase-IIIB_Mg magnesium-translocating P-type ATPa	97.03
KOG2630	254	consensus Enolase-phosphatase E-1 [Amino acid tran	97.01
TIGR01517	941	ATPase-IIB_Ca plasma-membrane calcium-translocatin	96.98
COG3769	274	Predicted hydrolase (HAD superfamily) [General fun	96.94
TIGR01523	1053	ATPase-IID_K-Na potassium and/or sodium efflux P-t	96.74
COG0474	917	MgtA Cation transport ATPase [Inorganic ion transp	96.73
TIGR01484	204	HAD-SF-IIB HAD-superfamily hydrolase, subfamily II	96.64
PLN02423	245	phosphomannomutase	96.61
TIGR01456	321	CECR5 HAD-superfamily class IIA hydrolase, TIGR014	96.46
KOG0202	972	consensus Ca2+ transporting ATPase [Inorganic ion	96.41
PF08235	157	LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209	96.28
PF13344	101	Hydrolase_6: Haloacid dehalogenase-like hydrolase;	96.21
PLN02645	311	phosphoglycolate phosphatase	96.16
TIGR02245	195	HAD_IIID1 HAD-superfamily subfamily IIID hydrolase	96.15
COG4030	315	Uncharacterized protein conserved in archaea [Func	96.14
TIGR01106	997	ATPase-IIC_X-K sodium or proton efflux -- potassiu	96.06
TIGR01494	499	ATPase_P-type ATPase, P-type (transporting), HAD s	96.02
TIGR01689	126	EcbF-BcbF capsule biosynthesis phosphatase. Due to	95.82
PLN02499	498	glycerol-3-phosphate acyltransferase	95.6
TIGR01452	279	PGP_euk phosphoglycolate/pyridoxal phosphate phosp	95.6
PLN02382	413	probable sucrose-phosphatase	95.24
PRK09484	183	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	95.09
TIGR01657	1054	P-ATPase-V P-type ATPase of unknown pump specifici	95.09
TIGR00685	244	T6PP trehalose-phosphatase. At least 18 distinct s	94.83
PF13344	101	Hydrolase_6: Haloacid dehalogenase-like hydrolase;	94.8
TIGR01484	204	HAD-SF-IIB HAD-superfamily hydrolase, subfamily II	94.75
PF03031	159	NIF: NLI interacting factor-like phosphatase; Inte	94.4
COG0647	269	NagD Predicted sugar phosphatases of the HAD super	94.34
TIGR02726	169	phenyl_P_delta phenylphosphate carboxylase, delta	94.29
COG1778	170	Low specificity phosphatase (HAD superfamily) [Gen	93.87
COG2216	681	KdpB High-affinity K+ transport system, ATPase cha	93.69
KOG2470	510	consensus Similar to IMP-GMP specific 5'-nucleotid	93.41
PF03031	159	NIF: NLI interacting factor-like phosphatase; Inte	93.0
TIGR01652	1057	ATPase-Plipid phospholipid-translocating P-type AT	92.25
KOG3107	468	consensus Predicted haloacid dehalogenase-like hyd	92.06
COG3700	237	AphA Acid phosphatase (class B) [General function	91.7
COG5610	635	Predicted hydrolase (HAD superfamily) [General fun	91.46
TIGR00685	244	T6PP trehalose-phosphatase. At least 18 distinct s	91.26
TIGR01457	249	HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr	90.27
PRK10444	248	UMP phosphatase; Provisional	90.1
COG4502	180	5'(3')-deoxyribonucleotidase [Nucleotide transport	89.96
TIGR01458	257	HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr	88.91
TIGR01658	274	EYA-cons_domain eyes absent protein conserved doma	88.72
PLN03017	366	trehalose-phosphatase	88.69
PF05761	448	5_nucleotid: 5' nucleotidase family; InterPro: IPR	87.54
PLN02423	245	phosphomannomutase	87.34
PLN03063	797	alpha,alpha-trehalose-phosphate synthase (UDP-form	86.29
smart00577	148	CPDc catalytic domain of ctd-like phosphatases.	86.14
PRK14501	726	putative bifunctional trehalose-6-phosphate syntha	85.54
PLN02151	354	trehalose-phosphatase	85.52
KOG2469	424	consensus IMP-GMP specific 5'-nucleotidase [Nucleo	85.51
PTZ00174	247	phosphomannomutase; Provisional	85.48
TIGR02251	162	HIF-SF_euk Dullard-like phosphatase domain. This d	85.34
PLN02580	384	trehalose-phosphatase	85.22
COG1877	266	OtsB Trehalose-6-phosphatase [Carbohydrate transpo	85.06
KOG3189	252	consensus Phosphomannomutase [Lipid transport and	84.71
PRK10513	270	sugar phosphate phosphatase; Provisional	84.37
TIGR02250	156	FCP1_euk FCP1-like phosphatase, phosphatase domain	84.0
PRK00192	273	mannosyl-3-phosphoglycerate phosphatase; Reviewed	83.92
PLN02205	854	alpha,alpha-trehalose-phosphate synthase [UDP-form	82.78
KOG0204	1034	consensus Calcium transporting ATPase [Inorganic i	82.46
PRK14501	726	putative bifunctional trehalose-6-phosphate syntha	81.99
TIGR01460	236	HAD-SF-IIA Haloacid Dehalogenase Superfamily Class	81.84
COG5083	580	SMP2 Uncharacterized protein involved in plasmid m	81.28
TIGR01487	215	SPP-like sucrose-phosphate phosphatase-like hydrol	81.1
PLN02382	413	probable sucrose-phosphatase	80.27

>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]

Probab=99.96  E-value=1.5e-27  Score=166.25  Aligned_cols=177  Identities=51%  Similarity=0.860  Sum_probs=166.1

Q ss_pred             CCCceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccHHHHHHcCCCCCccchhhhhh
Q 029593            2 DSPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLRALGYDIGADDYHGFVH   81 (191)
Q Consensus         2 ~~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (191)
                      .+++++++||+|.||++....+..+.++.+.+++.+++|++..++..+....+..||...+++...+...+..+|++.+.
T Consensus        12 ~~~~~~l~FDiDdtLYp~St~i~~~~~~nI~~f~~eklgi~~e~a~~L~~~~yk~YG~t~aGL~~~~~~~d~deY~~~V~   91 (244)
T KOG3109|consen   12 GPNYKCLFFDIDDTLYPLSTGIQLMMRNNIQEFFVEKLGISEEEAEELRESLYKEYGLTMAGLKAVGYIFDADEYHRFVH   91 (244)
T ss_pred             CccceEEEEecccccccCchhHHHHHHHHHHHHHHHHhCCChhhhHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHHHhh
Confidence            34689999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCCCCChhHHHHHHhhccCc-EEEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCH
Q 029593           82 GRLPYDLIKPDPQLRNLLCSITQRK-IIFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSM  160 (191)
Q Consensus        82 ~~~~~~~~~~~~~~~~~l~~l~~~g-~i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~  160 (191)
                      +++++..++|.+..+++|-.|++++ ++.||+++.++...++.+|+.++|+.+++.+...+        .+..+..||.+
T Consensus        92 ~~LPlq~LkPD~~LRnlLL~l~~r~k~~FTNa~k~HA~r~Lk~LGieDcFegii~~e~~np--------~~~~~vcKP~~  163 (244)
T KOG3109|consen   92 GRLPLQDLKPDPVLRNLLLSLKKRRKWIFTNAYKVHAIRILKKLGIEDCFEGIICFETLNP--------IEKTVVCKPSE  163 (244)
T ss_pred             ccCcHhhcCCCHHHHHHHHhCccccEEEecCCcHHHHHHHHHHhChHHhccceeEeeccCC--------CCCceeecCCH
Confidence            9999888999999999999999984 59999999999999999999999999999887664        36778889999


Q ss_pred             HHHHHHHHHcCCC-CCceEEecCcccc
Q 029593          161 DAMKLALHVANVD-PRHAVRQSSFLIF  186 (191)
Q Consensus       161 ~~~~~~~~~~~~~-p~~~i~iGDs~~~  186 (191)
                      .+|+.+.+..|+. |+++++|.||.+.
T Consensus       164 ~afE~a~k~agi~~p~~t~FfDDS~~N  190 (244)
T KOG3109|consen  164 EAFEKAMKVAGIDSPRNTYFFDDSERN  190 (244)
T ss_pred             HHHHHHHHHhCCCCcCceEEEcCchhh
Confidence            9999999999997 9999999999764

>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase

Probab=99.95  E-value=2.1e-26  Score=163.62  Aligned_cols=170  Identities=49%  Similarity=0.812  Sum_probs=134.2

Q ss_pred             eEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccHHHHHHcCCCCCccchhhhhhcCCC
Q 029593            6 NCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLRALGYDIGADDYHGFVHGRLP   85 (191)
Q Consensus         6 k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (191)
                      ++|+|||||||+|+...+..++.+++.+++.+..|++..+...+...++..++.....+... .....+.+...+.....
T Consensus         1 ~~viFDlDGTL~ds~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~   79 (184)
T TIGR01993         1 DVWFFDLDNTLYPHSAGIFLQIDRNITEFVAARLKLSEEEARVLRKDYYREYGTTLAGLMIL-HEIDADEYLRYVHGRLP   79 (184)
T ss_pred             CeEEEeCCCCCCCCcccHHHHHHHHHHHHHHHHcCcCHHHHHHHHHHHHHHHchHHHHHHHh-hCCCHHHHHHHHhccCC
Confidence            47999999999999988888888888777778889987776666666666666554443332 23445566666655333


Q ss_pred             CCCCCCChhHHHHHHhhccCcEEEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q 029593           86 YDLIKPDPQLRNLLCSITQRKIIFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKL  165 (191)
Q Consensus        86 ~~~~~~~~~~~~~l~~l~~~g~i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~  165 (191)
                      .....++||+.++|+.|+..-.++||++...+...++.+|+..+|+.++++++.+..          ...+||+|.+++.
T Consensus        80 ~~~~~~~~g~~~~L~~L~~~~~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~----------~~~~KP~p~~~~~  149 (184)
T TIGR01993        80 YEKLKPDPELRNLLLRLPGRKIIFTNGDRAHARRALNRLGIEDCFDGIFCFDTANPD----------YLLPKPSPQAYEK  149 (184)
T ss_pred             HHhCCCCHHHHHHHHhCCCCEEEEeCCCHHHHHHHHHHcCcHhhhCeEEEeecccCc----------cCCCCCCHHHHHH
Confidence            345779999999999999543399999999999999999999999999999877640          0113999999999


Q ss_pred             HHHHcCCCCCceEEecCcccc
Q 029593          166 ALHVANVDPRHAVRQSSFLIF  186 (191)
Q Consensus       166 ~~~~~~~~p~~~i~iGDs~~~  186 (191)
                      +++++|++|++|++|||+..|
T Consensus       150 ~~~~~~~~~~~~l~vgD~~~d  170 (184)
T TIGR01993       150 ALREAGVDPERAIFFDDSARN  170 (184)
T ss_pred             HHHHhCCCccceEEEeCCHHH
Confidence            999999999999999999865

These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).

>PRK13288 pyrophosphatase PpaX; Provisional

Probab=99.93  E-value=2.7e-25  Score=161.58  Aligned_cols=160  Identities=17%  Similarity=0.222  Sum_probs=115.3

Q ss_pred             CceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccHH-HHHHcCCCCCccchhhhhhc
Q 029593            4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLA-GLRALGYDIGADDYHGFVHG   82 (191)
Q Consensus         4 ~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~   82 (191)
                      ++++|+||+||||+|+...+..++..++     ++++........    .....|.... .+..+. ....+.+...+..
T Consensus         2 ~~~~viFD~DGTL~ds~~~~~~a~~~~~-----~~~~~~~~~~~~----~~~~~G~~~~~~~~~~~-~~~~~~~~~~~~~   71 (214)
T PRK13288          2 KINTVLFDLDGTLINTNELIISSFLHTL-----KTYYPNQYKRED----VLPFIGPSLHDTFSKID-ESKVEEMITTYRE   71 (214)
T ss_pred             CccEEEEeCCCcCccCHHHHHHHHHHHH-----HHhCCCCCCHHH----HHHHhCcCHHHHHHhcC-HHHHHHHHHHHHH
Confidence            4799999999999999998888888744     443432111111    1222333322 222221 1111222221211


Q ss_pred             ---CCCCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCC
Q 029593           83 ---RLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLL  156 (191)
Q Consensus        83 ---~~~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~  156 (191)
                         ........++||+.++|..|+++|+   |+||+....+...++.+|+..+|+.++++++...              +
T Consensus        72 ~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~--------------~  137 (214)
T PRK13288         72 FNHEHHDELVTEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFFDVVITLDDVEH--------------A  137 (214)
T ss_pred             HHHHhhhhhcccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhceeEEEecCcCCC--------------C
Confidence               1112336789999999999999886   9999999999999999999999999999888776              4


Q ss_pred             CCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          157 KPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       157 kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      ||+|.+++.++++++++|+++++|||+++|.
T Consensus       138 Kp~p~~~~~~~~~~~~~~~~~~~iGDs~~Di  168 (214)
T PRK13288        138 KPDPEPVLKALELLGAKPEEALMVGDNHHDI  168 (214)
T ss_pred             CCCcHHHHHHHHHcCCCHHHEEEECCCHHHH
Confidence            9999999999999999999999999999885

>PRK13226 phosphoglycolate phosphatase; Provisional

Probab=99.93  E-value=2.1e-25  Score=163.61  Aligned_cols=160  Identities=18%  Similarity=0.106  Sum_probs=115.2

Q ss_pred             CceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccHH-HHHHcCCCCCc-------cc
Q 029593            4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLA-GLRALGYDIGA-------DD   75 (191)
Q Consensus         4 ~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-------~~   75 (191)
                      ++|+|+|||||||+|+...+..++..     ..+++|.+........    ...|.... .+.........       +.
T Consensus        11 ~~k~viFD~DGTL~Ds~~~~~~a~~~-----~~~~~g~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~~~~~   81 (229)
T PRK13226         11 FPRAVLFDLDGTLLDSAPDMLATVNA-----MLAARGRAPITLAQLR----PVVSKGARAMLAVAFPELDAAARDALIPE   81 (229)
T ss_pred             cCCEEEEcCcCccccCHHHHHHHHHH-----HHHHCCCCCCCHHHHH----HHhhhHHHHHHHHHhccCChHHHHHHHHH
Confidence            57999999999999999988888887     4566776532222211    11122211 11111111111       11


Q ss_pred             hhhhhhcCCCCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCC
Q 029593           76 YHGFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEF  152 (191)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~  152 (191)
                      +...+.... .....++||+.++++.|+++|+   ++||++...+...++++++..+|+.+++++..+.           
T Consensus        82 ~~~~~~~~~-~~~~~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~-----------  149 (229)
T PRK13226         82 FLQRYEALI-GTQSQLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRCAVLIGGDTLAE-----------  149 (229)
T ss_pred             HHHHHHHhh-hhcCeeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcccEEEecCcCCC-----------
Confidence            222222211 1236889999999999999986   9999999888999999999999999998887665           


Q ss_pred             CCCCCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          153 PVLLKPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       153 ~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                         +||+|+++..+++++|++|++|++|||+.+|.
T Consensus       150 ---~KP~p~~~~~~~~~l~~~p~~~l~IGDs~~Di  181 (229)
T PRK13226        150 ---RKPHPLPLLVAAERIGVAPTDCVYVGDDERDI  181 (229)
T ss_pred             ---CCCCHHHHHHHHHHhCCChhhEEEeCCCHHHH
Confidence               49999999999999999999999999999874

>PLN02770 haloacid dehalogenase-like hydrolase family protein

Probab=99.93  E-value=5.4e-25  Score=163.19  Aligned_cols=160  Identities=24%  Similarity=0.247  Sum_probs=114.3

Q ss_pred             CceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCC----CHHHHHHHHHHHHHHhcccHH-HHHHcCCC-CC-c---
Q 029593            4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGF----SETKASSLRVELFKAYGSTLA-GLRALGYD-IG-A---   73 (191)
Q Consensus         4 ~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~----~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~-~---   73 (191)
                      ++++|+|||||||+|+...+..++.+++     ++.|.    +..... .   .....|.... .+..+... .. .   
T Consensus        21 ~~k~viFDlDGTLiDs~~~~~~a~~~~~-----~~~g~~~g~~~~~~~-~---~~~~~G~~~~~~~~~~~~~~~~~~~~~   91 (248)
T PLN02770         21 PLEAVLFDVDGTLCDSDPLHYYAFREML-----QEINFNGGVPITEEF-F---VENIAGKHNEDIALGLFPDDLERGLKF   91 (248)
T ss_pred             ccCEEEEcCCCccCcCHHHHHHHHHHHH-----HHhccccCCCCCHHH-H---HHHcCCCCHHHHHHHHcCcchhhHHHH
Confidence            6899999999999999998888888754     44432    211111 0   0011122211 11111111 00 0   


Q ss_pred             -cchhhhhhcCCCCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCC
Q 029593           74 -DDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRP  149 (191)
Q Consensus        74 -~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~  149 (191)
                       ..+...+.. .......++||+.++|+.|+++|+   |+||+....++..++++++..+|+.++++++...        
T Consensus        92 ~~~~~~~y~~-~~~~~~~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~iv~~~~~~~--------  162 (248)
T PLN02770         92 TDDKEALFRK-LASEQLKPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFFQAVIIGSECEH--------  162 (248)
T ss_pred             HHHHHHHHHH-HHHhcCCcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhCcEEEecCcCCC--------
Confidence             011111111 112347889999999999999987   9999999999999999999999999999998876        


Q ss_pred             CCCCCCCCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          150 DEFPVLLKPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       150 ~~~~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                            +||+|+++..++++++++|++|++|||++.|.
T Consensus       163 ------~KP~p~~~~~a~~~~~~~~~~~l~vgDs~~Di  194 (248)
T PLN02770        163 ------AKPHPDPYLKALEVLKVSKDHTFVFEDSVSGI  194 (248)
T ss_pred             ------CCCChHHHHHHHHHhCCChhHEEEEcCCHHHH
Confidence                  49999999999999999999999999999874

>PRK14988 GMP/IMP nucleotidase; Provisional

Probab=99.92  E-value=1.6e-24  Score=158.25  Aligned_cols=162  Identities=13%  Similarity=0.076  Sum_probs=113.0

Q ss_pred             CceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhccc-----HHHH-HHcCCCCCccchh
Q 029593            4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGST-----LAGL-RALGYDIGADDYH   77 (191)
Q Consensus         4 ~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-----~~~~-~~~~~~~~~~~~~   77 (191)
                      ++|+|+|||||||+|+... ...|.....+.+.+..|.+...........+......     .... ...+..  ...+.
T Consensus         9 ~~k~vIFDlDGTL~d~~~~-~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~   85 (224)
T PRK14988          9 DVDTVLLDMDGTLLDLAFD-NYFWQKLVPETLGAQRGISPQEAQEYIRQEYHAVQHTLNWYCLDYWSERLGLD--ICAMT   85 (224)
T ss_pred             cCCEEEEcCCCCccchhhh-chHHHhhHHHHHHHHhCcCHHHHHHHHHHHHHHHcCccceecHHHHHHHhCCC--HHHHH
Confidence            6899999999999996421 2234333333455677887654443322111111110     0111 111111  11111


Q ss_pred             hhhhcCCCCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCC
Q 029593           78 GFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPV  154 (191)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~  154 (191)
                      ..     ......++||+.++|+.|+++|+   ++||+....++..++++|+..+|+.++++++.+.             
T Consensus        86 ~~-----~~~~~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~iv~s~~~~~-------------  147 (224)
T PRK14988         86 TE-----QGPRAVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHLDLLLSTHTFGY-------------  147 (224)
T ss_pred             HH-----HhccCCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHCCEEEEeeeCCC-------------
Confidence            11     12347899999999999999986   9999999999999999999999999999988776             


Q ss_pred             CCCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          155 LLKPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       155 ~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                       +||+|++|..+++++|++|++|++|||+++|.
T Consensus       148 -~KP~p~~~~~~~~~~~~~p~~~l~igDs~~di  179 (224)
T PRK14988        148 -PKEDQRLWQAVAEHTGLKAERTLFIDDSEPIL  179 (224)
T ss_pred             -CCCCHHHHHHHHHHcCCChHHEEEEcCCHHHH
Confidence             49999999999999999999999999998763

>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional

Probab=99.92  E-value=5.3e-25  Score=156.92  Aligned_cols=162  Identities=18%  Similarity=0.229  Sum_probs=114.3

Q ss_pred             CCCCceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccHH-----HHHHcCCCCCccc
Q 029593            1 MDSPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLA-----GLRALGYDIGADD   75 (191)
Q Consensus         1 M~~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~   75 (191)
                      |+.++++|+|||||||+|+...+..++..+     .++.|.+.... .    .....|....     .....+.....+.
T Consensus         1 ~~~~~~~viFD~DGTLiDs~~~~~~a~~~~-----~~~~g~~~~~~-~----~~~~~g~~~~~~~~~~~~~~~~~~~~~~   70 (188)
T PRK10725          1 MYDRYAGLIFDMDGTILDTEPTHRKAWREV-----LGRYGLQFDEQ-A----MVALNGSPTWRIAQAIIELNQADLDPHA   70 (188)
T ss_pred             CCCcceEEEEcCCCcCccCHHHHHHHHHHH-----HHHcCCCCCHH-H----HHHhcCCCHHHHHHHHHHHhCCCCCHHH
Confidence            677899999999999999999888888873     45566643211 1    1111222211     1111122222222


Q ss_pred             hhhhhh---cCCCCCCCCCChhHHHHHHhhccCc-E-EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCC
Q 029593           76 YHGFVH---GRLPYDLIKPDPQLRNLLCSITQRK-I-IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPD  150 (191)
Q Consensus        76 ~~~~~~---~~~~~~~~~~~~~~~~~l~~l~~~g-~-i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~  150 (191)
                      +.....   .........+.|+ .++|..|++.. + |+||++...++..++++++..+|+.++++++.+.         
T Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~-~e~L~~L~~~~~l~I~T~~~~~~~~~~l~~~~l~~~fd~i~~~~~~~~---------  140 (188)
T PRK10725         71 LAREKTEAVKSMLLDSVEPLPL-IEVVKAWHGRRPMAVGTGSESAIAEALLAHLGLRRYFDAVVAADDVQH---------  140 (188)
T ss_pred             HHHHHHHHHHHHHhccCCCccH-HHHHHHHHhCCCEEEEcCCchHHHHHHHHhCCcHhHceEEEehhhccC---------
Confidence            222111   1111234567786 58999998652 3 9999999999999999999999999999998876         


Q ss_pred             CCCCCCCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          151 EFPVLLKPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       151 ~~~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                           .||+|+++..++++++++|++|++|||+..|.
T Consensus       141 -----~KP~p~~~~~~~~~~~~~~~~~l~igDs~~di  172 (188)
T PRK10725        141 -----HKPAPDTFLRCAQLMGVQPTQCVVFEDADFGI  172 (188)
T ss_pred             -----CCCChHHHHHHHHHcCCCHHHeEEEeccHhhH
Confidence                 49999999999999999999999999998874

>PRK11587 putative phosphatase; Provisional

Probab=99.92  E-value=1.6e-24  Score=157.89  Aligned_cols=158  Identities=18%  Similarity=0.156  Sum_probs=112.7

Q ss_pred             CceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccH-HHHHHcCCCCCccchhhhhhc
Q 029593            4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTL-AGLRALGYDIGADDYHGFVHG   82 (191)
Q Consensus         4 ~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~   82 (191)
                      ++|+|+|||||||+|+...+..++.+     .++++|.+......      ...|... ..++.+......+.+...+..
T Consensus         2 ~~k~viFDlDGTL~Ds~~~~~~a~~~-----~~~~~g~~~~~~~~------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~   70 (218)
T PRK11587          2 RCKGFLFDLDGTLVDSLPAVERAWSN-----WADRHGIAPDEVLN------FIHGKQAITSLRHFMAGASEAEIQAEFTR   70 (218)
T ss_pred             CCCEEEEcCCCCcCcCHHHHHHHHHH-----HHHHcCCCHHHHHH------HHcCCCHHHHHHHHhccCCcHHHHHHHHH
Confidence            47999999999999999988888887     45667876432111      1112221 122222212222222222211


Q ss_pred             -----CCCCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCC
Q 029593           83 -----RLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPV  154 (191)
Q Consensus        83 -----~~~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~  154 (191)
                           ........++||+.++|+.|+++|+   ++||++.......++..++ ..++.++++++...             
T Consensus        71 ~~~~~~~~~~~~~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l-~~~~~i~~~~~~~~-------------  136 (218)
T PRK11587         71 LEQIEATDTEGITALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGL-PAPEVFVTAERVKR-------------  136 (218)
T ss_pred             HHHHHHhhhcCceeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCC-CCccEEEEHHHhcC-------------
Confidence                 1112346889999999999999987   9999988888888888888 45778888877655             


Q ss_pred             CCCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          155 LLKPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       155 ~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                       +||+|+++..+++++|++|++|++||||.+|.
T Consensus       137 -~KP~p~~~~~~~~~~g~~p~~~l~igDs~~di  168 (218)
T PRK11587        137 -GKPEPDAYLLGAQLLGLAPQECVVVEDAPAGV  168 (218)
T ss_pred             -CCCCcHHHHHHHHHcCCCcccEEEEecchhhh
Confidence             49999999999999999999999999999874

>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]

Probab=99.92  E-value=5.2e-25  Score=160.35  Aligned_cols=158  Identities=26%  Similarity=0.308  Sum_probs=116.3

Q ss_pred             CceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhccc----HHHHHHcCCC---CCccch
Q 029593            4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGST----LAGLRALGYD---IGADDY   76 (191)
Q Consensus         4 ~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~---~~~~~~   76 (191)
                      ++++++|||||||+|+++.+.++|.+     +++++|+.......     ....+..    ...+......   ......
T Consensus         1 ~~~avIFD~DGvLvDse~~~~~a~~~-----~~~~~g~~~~~~~~-----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~   70 (221)
T COG0637           1 MIKAVIFDMDGTLVDSEPLHARAWLE-----ALKEYGIEISDEEI-----RELHGGGIARIIDLLRKLAAGEDPADLAEL   70 (221)
T ss_pred             CCcEEEEcCCCCcCcchHHHHHHHHH-----HHHHcCCCCCHHHH-----HHHHCCChHHHHHHHHHHhcCCcccCHHHH
Confidence            47999999999999999999999998     56777876433221     1112211    1111111111   111111


Q ss_pred             hhhhh--cCCCCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCC
Q 029593           77 HGFVH--GRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDE  151 (191)
Q Consensus        77 ~~~~~--~~~~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~  151 (191)
                      .....  ........++.||+.++++.|+++|+   +.|++.+..++..++.+|+..+|+.+++++++..          
T Consensus        71 ~~~~~~~~~~~~~~~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f~~~v~~~dv~~----------  140 (221)
T COG0637          71 ERLLYEAEALELEGLKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYFDVIVTADDVAR----------  140 (221)
T ss_pred             HHHHHHHHHhhhcCCCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhcchhccHHHHhc----------
Confidence            11111  11123457999999999999999877   7777888899999999999999999999998887          


Q ss_pred             CCCCCCCCHHHHHHHHHHcCCCCCceEEecCccc
Q 029593          152 FPVLLKPSMDAMKLALHVANVDPRHAVRQSSFLI  185 (191)
Q Consensus       152 ~~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~  185 (191)
                          +||+|+.|..+++++|+.|++|++|+||++
T Consensus       141 ----~KP~Pd~yL~Aa~~Lgv~P~~CvviEDs~~  170 (221)
T COG0637         141 ----GKPAPDIYLLAAERLGVDPEECVVVEDSPA  170 (221)
T ss_pred             ----CCCCCHHHHHHHHHcCCChHHeEEEecchh
Confidence                499999999999999999999999999986

>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253

Probab=99.92  E-value=1.3e-24  Score=158.74  Aligned_cols=167  Identities=26%  Similarity=0.297  Sum_probs=112.7

Q ss_pred             ceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCC--HHHHHHHHHHHHHHhccc-----HHHHHHcCCCCCccchh
Q 029593            5 FNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFS--ETKASSLRVELFKAYGST-----LAGLRALGYDIGADDYH   77 (191)
Q Consensus         5 ~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~   77 (191)
                      +++|+||+||||+++...+..++....+.  ....|.+  ...............+..     .............+...
T Consensus         2 ~~~viFDlDGTL~ds~~~~~~~~~~~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (221)
T TIGR02253         2 IKAIFFDLDDTLIDTSGLAEKARRNAIEV--LIEAGLNVDFEEAYEELLKLIKEYGSNYPTHFDYLIRRLWEEYNPKLVA   79 (221)
T ss_pred             ceEEEEeCCCCCcCCCCccCHHHHHHHHH--HHHCCCcCCHHHHHHHHHHHHHHhccccCcchHHHHHHHhhhcCHHHHH
Confidence            68999999999999998777666543322  2334443  222222111111122111     11111111111111111


Q ss_pred             hhhhcC--CCCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCC
Q 029593           78 GFVHGR--LPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEF  152 (191)
Q Consensus        78 ~~~~~~--~~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~  152 (191)
                      ......  .....+.++||+.++|+.|+++|+   ++||++...++..++++|+..+|+.++++++.+.           
T Consensus        80 ~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~-----------  148 (221)
T TIGR02253        80 AFVYAYHKLKFAYLRVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFFDAVITSEEEGV-----------  148 (221)
T ss_pred             HHHHHHHHHHHHhCCCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhccEEEEeccCCC-----------
Confidence            111100  112336899999999999999986   9999999999999999999999999999998876           


Q ss_pred             CCCCCCCHHHHHHHHHHcCCCCCceEEecCcc-ccc
Q 029593          153 PVLLKPSMDAMKLALHVANVDPRHAVRQSSFL-IFY  187 (191)
Q Consensus       153 ~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~-~~~  187 (191)
                         .||+|++++.+++++|++|++|++|||++ +|.
T Consensus       149 ---~KP~~~~~~~~~~~~~~~~~~~~~igDs~~~di  181 (221)
T TIGR02253       149 ---EKPHPKIFYAALKRLGVKPEEAVMVGDRLDKDI  181 (221)
T ss_pred             ---CCCCHHHHHHHHHHcCCChhhEEEECCChHHHH
Confidence               49999999999999999999999999998 663

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).

>PLN03243 haloacid dehalogenase-like hydrolase; Provisional

Probab=99.92  E-value=6.3e-25  Score=163.27  Aligned_cols=161  Identities=12%  Similarity=0.099  Sum_probs=115.3

Q ss_pred             CceEEEEecCCCCCCChH-HHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccHH-HHHHcC-CCCCcc---chh
Q 029593            4 PFNCLVFDLDDTLYPSET-GIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLA-GLRALG-YDIGAD---DYH   77 (191)
Q Consensus         4 ~~k~iifD~DGTL~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~---~~~   77 (191)
                      .+|+|+|||||||+|+.. .+..+|..     +.+++|++......    .....|.... .+..+. .....+   .+.
T Consensus        23 ~~k~vIFDlDGTLvDS~~~~~~~a~~~-----~~~~~G~~~~~~e~----~~~~~G~~~~~~~~~l~~~~~~~~~~~~l~   93 (260)
T PLN03243         23 GWLGVVLEWEGVIVEDDSELERKAWRA-----LAEEEGKRPPPAFL----LKRAEGMKNEQAISEVLCWSRDFLQMKRLA   93 (260)
T ss_pred             CceEEEEeCCCceeCCchHHHHHHHHH-----HHHHcCCCCCHHHH----HHHhcCCCHHHHHHHHhccCCCHHHHHHHH
Confidence            589999999999999964 45567776     55667775432221    1122233222 112111 111111   111


Q ss_pred             hhhh---cCCCCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCC
Q 029593           78 GFVH---GRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDE  151 (191)
Q Consensus        78 ~~~~---~~~~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~  151 (191)
                      ....   .........++||+.++|+.|+++|+   |+||++...++..++++++..+|+.++++++...          
T Consensus        94 ~~~~~~~~~~~~~~~~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~ii~~~d~~~----------  163 (260)
T PLN03243         94 IRKEDLYEYMQGGLYRLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFSVVLAAEDVYR----------  163 (260)
T ss_pred             HHHHHHHHHHHccCcccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCcEEEecccCCC----------
Confidence            1111   11112346789999999999999987   9999999999999999999999999999998776          


Q ss_pred             CCCCCCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          152 FPVLLKPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       152 ~~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                          +||+|++|..+++++|++|++|++||||.+|.
T Consensus       164 ----~KP~Pe~~~~a~~~l~~~p~~~l~IgDs~~Di  195 (260)
T PLN03243        164 ----GKPDPEMFMYAAERLGFIPERCIVFGNSNSSV  195 (260)
T ss_pred             ----CCCCHHHHHHHHHHhCCChHHeEEEcCCHHHH
Confidence                49999999999999999999999999999875

>COG0546 Gph Predicted phosphatases [General function prediction only]

Probab=99.92  E-value=3.4e-24  Score=156.20  Aligned_cols=162  Identities=23%  Similarity=0.264  Sum_probs=117.8

Q ss_pred             CCceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccHHHH-H-HcCCCCC------cc
Q 029593            3 SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGL-R-ALGYDIG------AD   74 (191)
Q Consensus         3 ~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~------~~   74 (191)
                      +++++|+||+||||+|+...+..++..     ..+.+|.+.......    ....|...... . .......      .+
T Consensus         2 ~~~~~iiFDlDGTL~Ds~~~~~~~~~~-----~~~~~~~~~~~~~~~----~~~ig~~~~~~~~~~~~~~~~~~~~~~~~   72 (220)
T COG0546           2 MMIKAILFDLDGTLVDSAEDILRAFNA-----ALAELGLPPLDEEEI----RQLIGLGLDELIERLLGEADEEAAAELVE   72 (220)
T ss_pred             CCCCEEEEeCCCccccChHHHHHHHHH-----HHHHcCCCCCCHHHH----HHHhcCCHHHHHHHHhccccchhHHHHHH
Confidence            358999999999999999999988886     567777774333332    22222222211 1 1111110      11


Q ss_pred             chhhhhhcCCCCC-CCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCC
Q 029593           75 DYHGFVHGRLPYD-LIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPD  150 (191)
Q Consensus        75 ~~~~~~~~~~~~~-~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~  150 (191)
                      .+...+....... ...++||+.++|..|+++|+   |+||++...++..++++|+..+|+.+++++....         
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i~g~~~~~~---------  143 (220)
T COG0546          73 RLREEFLTAYAELLESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVIVGGDDVPP---------  143 (220)
T ss_pred             HHHHHHHHHHHhhccCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccceEEcCCCCCC---------
Confidence            1111121111111 35799999999999999997   9999999999999999999999999999666555         


Q ss_pred             CCCCCCCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          151 EFPVLLKPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       151 ~~~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                           .||+|..+..+++.++++|++++||||+.+|-
T Consensus       144 -----~KP~P~~l~~~~~~~~~~~~~~l~VGDs~~Di  175 (220)
T COG0546         144 -----PKPDPEPLLLLLEKLGLDPEEALMVGDSLNDI  175 (220)
T ss_pred             -----CCcCHHHHHHHHHHhCCChhheEEECCCHHHH
Confidence                 49999999999999999999999999999884

>PRK10826 2-deoxyglucose-6-phosphatase; Provisional

Probab=99.92  E-value=9e-25  Score=159.66  Aligned_cols=161  Identities=17%  Similarity=0.161  Sum_probs=116.2

Q ss_pred             CceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccHHHH-H----HcCC-CCCccchh
Q 029593            4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGL-R----ALGY-DIGADDYH   77 (191)
Q Consensus         4 ~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~-~~~~~~~~   77 (191)
                      ++++|+||+||||+|+.+.+..++.+     +.+..|.+......+    ....+...... .    .... ....+.+.
T Consensus         6 ~~k~iiFD~DGTL~d~~~~~~~a~~~-----~~~~~g~~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~   76 (222)
T PRK10826          6 QILAAIFDMDGLLIDSEPLWDRAELD-----VMASLGVDISRREEL----PDTLGLRIDQVVDLWYARQPWNGPSRQEVV   76 (222)
T ss_pred             cCcEEEEcCCCCCCcCHHHHHHHHHH-----HHHHCCCCCCHHHHH----HHhhCCCHHHHHHHHHHhcCCCCCCHHHHH
Confidence            69999999999999999888888876     456667653321211    12222221111 1    1111 11111221


Q ss_pred             hhhhcC---CCCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCC
Q 029593           78 GFVHGR---LPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDE  151 (191)
Q Consensus        78 ~~~~~~---~~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~  151 (191)
                      ..+.+.   .......++||+.++++.|+++|+   ++||+....++.+++++++..+|+.+++++..+.          
T Consensus        77 ~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~----------  146 (222)
T PRK10826         77 QRIIARVISLIEETRPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFDALASAEKLPY----------  146 (222)
T ss_pred             HHHHHHHHHHHhcCCCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcccEEEEcccCCC----------
Confidence            111111   112346899999999999999987   9999999999999999999999999999988766          


Q ss_pred             CCCCCCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          152 FPVLLKPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       152 ~~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                          +||+|.+++.+++++|++|++|++|||+.+|.
T Consensus       147 ----~Kp~~~~~~~~~~~~~~~~~~~~~igDs~~Di  178 (222)
T PRK10826        147 ----SKPHPEVYLNCAAKLGVDPLTCVALEDSFNGM  178 (222)
T ss_pred             ----CCCCHHHHHHHHHHcCCCHHHeEEEcCChhhH
Confidence                59999999999999999999999999999874

>PLN02575 haloacid dehalogenase-like hydrolase

Probab=99.92  E-value=5.7e-24  Score=163.80  Aligned_cols=163  Identities=13%  Similarity=0.136  Sum_probs=117.1

Q ss_pred             CCCCceEEEEecCCCCCCChHHH-HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccHHH-HHHcC-CCCCcc---
Q 029593            1 MDSPFNCLVFDLDDTLYPSETGI-AAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAG-LRALG-YDIGAD---   74 (191)
Q Consensus         1 M~~~~k~iifD~DGTL~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~---   74 (191)
                      |...+++|||||||||+|+...+ ..+|..     +.+..|.+......    .....|..... +..+. ......   
T Consensus       127 ~~~~~~~VIFDlDGTLIDS~~~i~~~a~~~-----l~~e~G~~~~~~e~----~~~~~G~~~~~~l~~ll~~~~~~~~~e  197 (381)
T PLN02575        127 MGCGWLGAIFEWEGVIIEDNPDLENQAWLT-----LAQEEGKSPPPAFI----LRRVEGMKNEQAISEVLCWSRDPAELR  197 (381)
T ss_pred             ccCCCCEEEEcCcCcceeCHHHHHHHHHHH-----HHHHcCCCCCHHHH----HHHhcCCCHHHHHHHHhhccCCHHHHH
Confidence            33478999999999999998754 457776     44666765433221    11223333221 22211 111111   


Q ss_pred             ch----hhhhhcCCCCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCC
Q 029593           75 DY----HGFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKAT  147 (191)
Q Consensus        75 ~~----~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~  147 (191)
                      .+    ...+.... .....++||+.++|+.|+++|+   |+||+....++..++++|+..+|+.++++++...      
T Consensus       198 ~l~~~~~~~y~~~~-~~~~~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yFd~Iv~sddv~~------  270 (381)
T PLN02575        198 RMATRKEEIYQALQ-GGIYRLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFFSVIVAAEDVYR------  270 (381)
T ss_pred             HHHHHHHHHHHHHh-ccCCCcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHceEEEecCcCCC------
Confidence            11    11221111 2336789999999999999987   9999999999999999999999999999998776      


Q ss_pred             CCCCCCCCCCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          148 RPDEFPVLLKPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       148 ~~~~~~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                              +||+|++|..+++++|+.|++|++|||+..|.
T Consensus       271 --------~KP~Peifl~A~~~lgl~Peecl~IGDS~~DI  302 (381)
T PLN02575        271 --------GKPDPEMFIYAAQLLNFIPERCIVFGNSNQTV  302 (381)
T ss_pred             --------CCCCHHHHHHHHHHcCCCcccEEEEcCCHHHH
Confidence                    49999999999999999999999999998763

>TIGR03351 PhnX-like phosphonatase-like hydrolase

Probab=99.91  E-value=5.5e-24  Score=155.28  Aligned_cols=160  Identities=17%  Similarity=0.179  Sum_probs=114.8

Q ss_pred             ceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccH-HHHHHcCC--CCCccc---hhh
Q 029593            5 FNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTL-AGLRALGY--DIGADD---YHG   78 (191)
Q Consensus         5 ~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~---~~~   78 (191)
                      +|+|+||+||||+++.+.+..++.++     .+++|.+....+...  .  ..+... ..+..+..  ....+.   +..
T Consensus         1 ~k~iiFD~DGTL~ds~~~~~~~~~~~-----~~~~g~~~~~~~~~~--~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~~   71 (220)
T TIGR03351         1 ISLVVLDMAGTTVDEDGLVYRALRQA-----VTAAGLSPTPEEVQS--A--WMGQSKIEAIRALLALDGADEAEAQAAFA   71 (220)
T ss_pred             CcEEEEecCCCeeccCchHHHHHHHH-----HHHcCCCCCHHHHHH--h--hcCCCHHHHHHHHHhccCCCHHHHHHHHH
Confidence            58999999999999999888888873     455676543222111  0  122221 11222111  111111   111


Q ss_pred             ----hhhcCCCCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCC--cccceeeecccCCCCCCCCCCC
Q 029593           79 ----FVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIA--DCFDQIICFETMNPNLSKATRP  149 (191)
Q Consensus        79 ----~~~~~~~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~--~~f~~i~~~~~~~~~~~~~~~~  149 (191)
                          .+..........++||+.++|..|+++|+   ++||+....++..++.+++.  ++|+.++++++...        
T Consensus        72 ~~~~~~~~~~~~~~~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~~~~~~--------  143 (220)
T TIGR03351        72 DFEERLAEAYDDGPPVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCPSDVAA--------  143 (220)
T ss_pred             HHHHHHHHHhcccCCccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcCCcCCC--------
Confidence                22221112346899999999999999887   99999999999999999998  99999999988765        


Q ss_pred             CCCCCCCCCCHHHHHHHHHHcCCC-CCceEEecCccccc
Q 029593          150 DEFPVLLKPSMDAMKLALHVANVD-PRHAVRQSSFLIFY  187 (191)
Q Consensus       150 ~~~~~~~kp~~~~~~~~~~~~~~~-p~~~i~iGDs~~~~  187 (191)
                            .||+|.++..+++++++. |++|++|||+++|.
T Consensus       144 ------~KP~p~~~~~a~~~~~~~~~~~~~~igD~~~Di  176 (220)
T TIGR03351       144 ------GRPAPDLILRAMELTGVQDVQSVAVAGDTPNDL  176 (220)
T ss_pred             ------CCCCHHHHHHHHHHcCCCChhHeEEeCCCHHHH
Confidence                  499999999999999997 79999999999873

This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the

>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic

Probab=99.91  E-value=1e-23  Score=153.10  Aligned_cols=157  Identities=23%  Similarity=0.281  Sum_probs=111.9

Q ss_pred             EEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccHH-H----HHHcCCCCCcc---chhhh
Q 029593            8 LVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLA-G----LRALGYDIGAD---DYHGF   79 (191)
Q Consensus         8 iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~---~~~~~   79 (191)
                      |+||+||||+|+...+..++..     ..++.|.+.......    ....+.... .    +...+.+...+   ++.+.
T Consensus         1 viFD~DGTL~Ds~~~~~~~~~~-----~~~~~~~~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   71 (213)
T TIGR01449         1 VLFDLDGTLVDSAPDIAAAVNM-----ALAALGLPPATLARV----IGFIGNGVPVLMERVLAWAGQEPDAQRVAELRKL   71 (213)
T ss_pred             CeecCCCccccCHHHHHHHHHH-----HHHHCCCCCCCHHHH----HHHhcccHHHHHHHHhhccccccChHHHHHHHHH
Confidence            6899999999999888777776     445666643222221    111222211 1    11112122211   11221


Q ss_pred             hhcC---CCCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCC
Q 029593           80 VHGR---LPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFP  153 (191)
Q Consensus        80 ~~~~---~~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~  153 (191)
                      +...   .......++||+.++|+.|+++|+   |+||++...++.+++++++..+|+.++++++...            
T Consensus        72 ~~~~~~~~~~~~~~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~------------  139 (213)
T TIGR01449        72 FDRHYEEVAGELTSVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYFSVLIGGDSLAQ------------  139 (213)
T ss_pred             HHHHHHHhccccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhCcEEEecCCCCC------------
Confidence            1111   112246889999999999999886   9999999999999999999999999999887765            


Q ss_pred             CCCCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          154 VLLKPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       154 ~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                        .||+|+++..++++++++|++|++|||+.+|.
T Consensus       140 --~Kp~p~~~~~~~~~~~~~~~~~~~igDs~~d~  171 (213)
T TIGR01449       140 --RKPHPDPLLLAAERLGVAPQQMVYVGDSRVDI  171 (213)
T ss_pred             --CCCChHHHHHHHHHcCCChhHeEEeCCCHHHH
Confidence              49999999999999999999999999999885

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).

>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase

Probab=99.91  E-value=6.7e-24  Score=150.81  Aligned_cols=157  Identities=21%  Similarity=0.249  Sum_probs=110.5

Q ss_pred             ceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccHH-----HHHHcCCCCCccchhh-
Q 029593            5 FNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLA-----GLRALGYDIGADDYHG-   78 (191)
Q Consensus         5 ~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~-   78 (191)
                      +++|+||+||||+|+...+..++.++     .+.+|.+...  ...   ....+....     .+...+.....+.+.. 
T Consensus         1 ~~~iiFD~DGTL~ds~~~~~~~~~~~-----~~~~g~~~~~--~~~---~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~   70 (185)
T TIGR02009         1 YKAVIFDMDGVIVDTAPLHAQAWKHL-----ADKYGIEFDK--QYN---TSLGGLSREDILRAILKLRKPGLSLETIHQL   70 (185)
T ss_pred             CCeEEEcCCCcccCChHHHHHHHHHH-----HHHcCCCCCH--HHH---HHcCCCCHHHHHHHHHHhcCCCCCHHHHHHH
Confidence            58999999999999998887788773     4556665321  110   111121111     1111111222222211 


Q ss_pred             ------hhhcCCCCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCC
Q 029593           79 ------FVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRP  149 (191)
Q Consensus        79 ------~~~~~~~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~  149 (191)
                            .+...+......++||+.++|+.|+++|+   ++||+  ..++.+++++++..+|+.++++++.+.        
T Consensus        71 ~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f~~v~~~~~~~~--------  140 (185)
T TIGR02009        71 AERKNELYRELLRLTGAEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYFDAIVDADEVKE--------  140 (185)
T ss_pred             HHHHHHHHHHHHhccCCCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHCCEeeehhhCCC--------
Confidence                  12221112347899999999999999987   77776  668889999999999999999887766        


Q ss_pred             CCCCCCCCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          150 DEFPVLLKPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       150 ~~~~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                            +||+|+++..++++++++|+++++|||+..|.
T Consensus       141 ------~kp~~~~~~~~~~~~~~~~~~~v~IgD~~~di  172 (185)
T TIGR02009       141 ------GKPHPETFLLAAELLGVSPNECVVFEDALAGV  172 (185)
T ss_pred             ------CCCChHHHHHHHHHcCCCHHHeEEEeCcHhhH
Confidence                  49999999999999999999999999999874

All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).

>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase

Probab=99.91  E-value=1.3e-23  Score=156.32  Aligned_cols=86  Identities=12%  Similarity=0.011  Sum_probs=78.7

Q ss_pred             CCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCccc-ceeeecccCCCCCCCCCCCCCCCCCCCCCHHHH
Q 029593           88 LIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCF-DQIICFETMNPNLSKATRPDEFPVLLKPSMDAM  163 (191)
Q Consensus        88 ~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f-~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~  163 (191)
                      ...++||+.++|+.|+++|+   |+||++...++.+++++++..+| +.++++++...              +||+|+++
T Consensus        97 ~~~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~d~ii~~~~~~~--------------~KP~p~~~  162 (253)
T TIGR01422        97 YSSPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRPDYNVTTDDVPA--------------GRPAPWMA  162 (253)
T ss_pred             cCccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCCceEEccccCCC--------------CCCCHHHH
Confidence            46899999999999999987   99999999999999999999985 88999888766              49999999


Q ss_pred             HHHHHHcCCC-CCceEEecCccccc
Q 029593          164 KLALHVANVD-PRHAVRQSSFLIFY  187 (191)
Q Consensus       164 ~~~~~~~~~~-p~~~i~iGDs~~~~  187 (191)
                      ..+++++++. |++|++||||++|.
T Consensus       163 ~~a~~~l~~~~~~~~l~IGDs~~Di  187 (253)
T TIGR01422       163 LKNAIELGVYDVAACVKVGDTVPDI  187 (253)
T ss_pred             HHHHHHcCCCCchheEEECCcHHHH
Confidence            9999999995 99999999999874

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.

>PRK10563 6-phosphogluconate phosphatase; Provisional

Probab=99.90  E-value=2.3e-23  Score=152.15  Aligned_cols=159  Identities=17%  Similarity=0.164  Sum_probs=113.1

Q ss_pred             CceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccHH-----HHHHcCCCCCccchhh
Q 029593            4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLA-----GLRALGYDIGADDYHG   78 (191)
Q Consensus         4 ~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~   78 (191)
                      ++++|+||+||||+|+...+..++.+     ..+.+|.+... .+....+   .+....     .....+.....+.+..
T Consensus         3 ~~~~viFD~DGTL~d~~~~~~~a~~~-----~~~~~g~~~~~-~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~   73 (221)
T PRK10563          3 QIEAVFFDCDGTLVDSEVICSRAYVT-----MFAEFGITLSL-EEVFKRF---KGVKLYEIIDIISKEHGVTLAKAELEP   73 (221)
T ss_pred             CCCEEEECCCCCCCCChHHHHHHHHH-----HHHHcCCCCCH-HHHHHHh---cCCCHHHHHHHHHHHhCCCCCHHHHHH
Confidence            58999999999999999877777776     44556765322 1111111   111111     1122233333344443


Q ss_pred             hhhcCC---CCCCCCCChhHHHHHHhhccCcE-EEecCChHHHHHHHhhcCCCcccc-eeeecccCCCCCCCCCCCCCCC
Q 029593           79 FVHGRL---PYDLIKPDPQLRNLLCSITQRKI-IFTNSDRNHAITCLKRLEIADCFD-QIICFETMNPNLSKATRPDEFP  153 (191)
Q Consensus        79 ~~~~~~---~~~~~~~~~~~~~~l~~l~~~g~-i~t~~~~~~~~~~l~~~~l~~~f~-~i~~~~~~~~~~~~~~~~~~~~  153 (191)
                      .+....   ......++||+.++|+.|+ ..+ |+||++...+...++++++..+|+ .++++++.+.            
T Consensus        74 ~~~~~~~~~~~~~~~~~~gv~~~L~~L~-~~~~ivTn~~~~~~~~~l~~~~l~~~F~~~v~~~~~~~~------------  140 (221)
T PRK10563         74 VYRAEVARLFDSELEPIAGANALLESIT-VPMCVVSNGPVSKMQHSLGKTGMLHYFPDKLFSGYDIQR------------  140 (221)
T ss_pred             HHHHHHHHHHHccCCcCCCHHHHHHHcC-CCEEEEeCCcHHHHHHHHHhcChHHhCcceEeeHHhcCC------------
Confidence            332211   1234788999999999995 444 999999999999999999999996 5777776665            


Q ss_pred             CCCCCCHHHHHHHHHHcCCCCCceEEecCcccc
Q 029593          154 VLLKPSMDAMKLALHVANVDPRHAVRQSSFLIF  186 (191)
Q Consensus       154 ~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~  186 (191)
                        +||+|++|..++++++++|++|++|||++.|
T Consensus       141 --~KP~p~~~~~a~~~~~~~p~~~l~igDs~~d  171 (221)
T PRK10563        141 --WKPDPALMFHAAEAMNVNVENCILVDDSSAG  171 (221)
T ss_pred             --CCCChHHHHHHHHHcCCCHHHeEEEeCcHhh
Confidence              4999999999999999999999999999987

>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II

Probab=99.90  E-value=2.7e-23  Score=149.28  Aligned_cols=86  Identities=21%  Similarity=0.308  Sum_probs=80.0

Q ss_pred             CCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHH
Q 029593           88 LIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMK  164 (191)
Q Consensus        88 ~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~  164 (191)
                      ...++|++.++|+.|+++|+   ++||++...++..++++|+..+|+.++++++++.              .||+|.+|+
T Consensus        90 ~~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~~--------------~KP~~~~~~  155 (198)
T TIGR01428        90 RLPPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPFDAVLSADAVRA--------------YKPAPQVYQ  155 (198)
T ss_pred             cCCCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhhheeEehhhcCC--------------CCCCHHHHH
Confidence            36789999999999999986   9999999999999999999999999999998876              499999999


Q ss_pred             HHHHHcCCCCCceEEecCccccc
Q 029593          165 LALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       165 ~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      .+++++|++|++|++|||+++|.
T Consensus       156 ~~~~~~~~~p~~~~~vgD~~~Di  178 (198)
T TIGR01428       156 LALEALGVPPDEVLFVASNPWDL  178 (198)
T ss_pred             HHHHHhCCChhhEEEEeCCHHHH
Confidence            99999999999999999999764

Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.

>PLN02940 riboflavin kinase

Probab=99.90  E-value=1.5e-23  Score=163.72  Aligned_cols=160  Identities=20%  Similarity=0.222  Sum_probs=116.6

Q ss_pred             CceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccHH-----HHHHcCCCCCccchhh
Q 029593            4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLA-----GLRALGYDIGADDYHG   78 (191)
Q Consensus         4 ~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~   78 (191)
                      .+++|+||+||||+|+...+..++..     +.+.+|.+.....     .....|....     .+...+.+...+++..
T Consensus        10 ~ik~VIFDlDGTLvDt~~~~~~a~~~-----~~~~~G~~~~~~~-----~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~   79 (382)
T PLN02940         10 LVSHVILDLDGTLLNTDGIVSDVLKA-----FLVKYGKQWDGRE-----AQKIVGKTPLEAAATVVEDYGLPCSTDEFNS   79 (382)
T ss_pred             cCCEEEECCcCcCCcCHHHHHHHHHH-----HHHHcCCCCCHHH-----HHHhcCCCHHHHHHHHHHHhCCCCCHHHHHH
Confidence            48999999999999999988888887     4456676532221     1122222111     1122232333333322


Q ss_pred             hhhcCC--CCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHh-hcCCCcccceeeecccCCCCCCCCCCCCCC
Q 029593           79 FVHGRL--PYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLK-RLEIADCFDQIICFETMNPNLSKATRPDEF  152 (191)
Q Consensus        79 ~~~~~~--~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~-~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~  152 (191)
                      .+....  ......++||+.++|+.|+++|+   |+||+....+...++ .+++..+|+.++++++...           
T Consensus        80 ~~~~~~~~~~~~~~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~Fd~ii~~d~v~~-----------  148 (382)
T PLN02940         80 EITPLLSEQWCNIKALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESFSVIVGGDEVEK-----------  148 (382)
T ss_pred             HHHHHHHHHHccCCCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhCCEEEehhhcCC-----------
Confidence            222111  12346789999999999999987   999999999888887 7899999999999998776           


Q ss_pred             CCCCCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          153 PVLLKPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       153 ~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                         +||+|+++..++++++++|++|++|||+..|-
T Consensus       149 ---~KP~p~~~~~a~~~lgv~p~~~l~VGDs~~Di  180 (382)
T PLN02940        149 ---GKPSPDIFLEAAKRLNVEPSNCLVIEDSLPGV  180 (382)
T ss_pred             ---CCCCHHHHHHHHHHcCCChhHEEEEeCCHHHH
Confidence               49999999999999999999999999998763

>TIGR01990 bPGM beta-phosphoglucomutase

Probab=99.90  E-value=1.3e-23  Score=149.34  Aligned_cols=155  Identities=20%  Similarity=0.208  Sum_probs=107.5

Q ss_pred             EEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccH-H----HHHHcCCCCCccchhh---
Q 029593            7 CLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTL-A----GLRALGYDIGADDYHG---   78 (191)
Q Consensus         7 ~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~---   78 (191)
                      +|+||+||||+|+...+..++.+     +.+.+|.+......     ....+... .    .+...+...+.+....   
T Consensus         1 ~iiFD~DGTL~ds~~~~~~~~~~-----~~~~~g~~~~~~~~-----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~   70 (185)
T TIGR01990         1 AVIFDLDGVITDTAEYHYLAWKA-----LADELGIPFDEEFN-----ESLKGVSREDSLERILDLGGKKYSEEEKEELAE   70 (185)
T ss_pred             CeEEcCCCccccChHHHHHHHHH-----HHHHcCCCCCHHHH-----HHhcCCChHHHHHHHHHhcCCCCCHHHHHHHHH
Confidence            58999999999999988888877     44566665322111     11111111 1    1112222222222211   


Q ss_pred             ----hhhcCCC-CCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCC
Q 029593           79 ----FVHGRLP-YDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPD  150 (191)
Q Consensus        79 ----~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~  150 (191)
                          .+..... .....++||+.++|+.|+++|+   ++||+..  ....++++++..+|+.++++++.+.         
T Consensus        71 ~~~~~~~~~~~~~~~~~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f~~~~~~~~~~~---------  139 (185)
T TIGR01990        71 RKNDYYVELLKELTPADVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYFDAIVDPAEIKK---------  139 (185)
T ss_pred             HHHHHHHHHHHhcCCcccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhCcEEEehhhcCC---------
Confidence                1111110 1235789999999999999987   7887643  4678999999999999999888776         


Q ss_pred             CCCCCCCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          151 EFPVLLKPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       151 ~~~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                           +||+|++|+.++++++++|++|++|||+.+|.
T Consensus       140 -----~kp~p~~~~~~~~~~~~~~~~~v~vgD~~~di  171 (185)
T TIGR01990       140 -----GKPDPEIFLAAAEGLGVSPSECIGIEDAQAGI  171 (185)
T ss_pred             -----CCCChHHHHHHHHHcCCCHHHeEEEecCHHHH
Confidence                 49999999999999999999999999999874

The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.

>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein

Probab=99.90  E-value=4.6e-23  Score=148.89  Aligned_cols=156  Identities=21%  Similarity=0.232  Sum_probs=111.0

Q ss_pred             EEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccHH-HHHHcCCCCCc-cchhhhhhcCCC
Q 029593            8 LVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLA-GLRALGYDIGA-DDYHGFVHGRLP   85 (191)
Q Consensus         8 iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~   85 (191)
                      |+|||||||+|+.+.+..++.+++.+    ..|.+......    .....+.... .+..++.+... +.+......  .
T Consensus         1 iiFDlDGTL~Ds~~~~~~~~~~~~~~----~~~~~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~   70 (205)
T TIGR01454         1 VVFDLDGVLVDSFAVMREAFAIAYRE----VVGDGPAPFEE----YRRHLGRYFPDIMRIMGLPLEMEEPFVRESYR--L   70 (205)
T ss_pred             CeecCcCccccCHHHHHHHHHHHHHH----hcCCCCCCHHH----HHHHhCccHHHHHHHcCCCHHHHHHHHHHHHH--h
Confidence            68999999999999888888874432    23443211111    1122222221 22222221111 111111111  1


Q ss_pred             CCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHH
Q 029593           86 YDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDA  162 (191)
Q Consensus        86 ~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~  162 (191)
                      ...+.++||+.++|+.|+++|+   ++||++...++..++++|+..+|+.++++++.+.              +||+|.+
T Consensus        71 ~~~~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~--------------~KP~~~~  136 (205)
T TIGR01454        71 AGEVEVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFDHVIGSDEVPR--------------PKPAPDI  136 (205)
T ss_pred             hcccccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhheeeEEecCcCCC--------------CCCChHH
Confidence            2347899999999999999986   9999999999999999999999999999887655              5999999


Q ss_pred             HHHHHHHcCCCCCceEEecCccccc
Q 029593          163 MKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       163 ~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      +..++++++++|++|++|||+++|.
T Consensus       137 ~~~~~~~~~~~~~~~l~igD~~~Di  161 (205)
T TIGR01454       137 VREALRLLDVPPEDAVMVGDAVTDL  161 (205)
T ss_pred             HHHHHHHcCCChhheEEEcCCHHHH
Confidence            9999999999999999999999875

The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.

>PRK13478 phosphonoacetaldehyde hydrolase; Provisional

Probab=99.90  E-value=6e-23  Score=153.90  Aligned_cols=86  Identities=12%  Similarity=0.035  Sum_probs=77.0

Q ss_pred             CCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCccc-ceeeecccCCCCCCCCCCCCCCCCCCCCCHHHH
Q 029593           88 LIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCF-DQIICFETMNPNLSKATRPDEFPVLLKPSMDAM  163 (191)
Q Consensus        88 ~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f-~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~  163 (191)
                      ...++||+.++|+.|+++|+   |+||+....+..+++.+++..+| +.++++++...              .||+|.++
T Consensus        99 ~~~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~d~i~~~~~~~~--------------~KP~p~~~  164 (267)
T PRK13478         99 YATPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRPDHVVTTDDVPA--------------GRPYPWMA  164 (267)
T ss_pred             cCCCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCceEEEcCCcCCC--------------CCCChHHH
Confidence            46889999999999999987   99999999999999999888874 88888887766              49999999


Q ss_pred             HHHHHHcCCC-CCceEEecCccccc
Q 029593          164 KLALHVANVD-PRHAVRQSSFLIFY  187 (191)
Q Consensus       164 ~~~~~~~~~~-p~~~i~iGDs~~~~  187 (191)
                      ..+++++|+. |++|++|||+++|.
T Consensus       165 ~~a~~~l~~~~~~e~l~IGDs~~Di  189 (267)
T PRK13478        165 LKNAIELGVYDVAACVKVDDTVPGI  189 (267)
T ss_pred             HHHHHHcCCCCCcceEEEcCcHHHH
Confidence            9999999996 69999999999874

>PRK13222 phosphoglycolate phosphatase; Provisional

Probab=99.89  E-value=1.1e-22  Score=148.91  Aligned_cols=161  Identities=20%  Similarity=0.221  Sum_probs=115.2

Q ss_pred             CCceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccHHH-----HHHcCCCCCccchh
Q 029593            3 SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAG-----LRALGYDIGADDYH   77 (191)
Q Consensus         3 ~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~   77 (191)
                      +++++|+||+||||+++...+..++..     ..+..|.+........    ...+.....     +...+.....+...
T Consensus         4 ~~~~~iiFD~DGTL~d~~~~~~~~~~~-----~~~~~~~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~~~~   74 (226)
T PRK13222          4 MDIRAVAFDLDGTLVDSAPDLAAAVNA-----ALAALGLPPAGEERVR----TWVGNGADVLVERALTWAGREPDEELLE   74 (226)
T ss_pred             CcCcEEEEcCCcccccCHHHHHHHHHH-----HHHHCCCCCCCHHHHH----HHhCccHHHHHHHHHhhccCCccHHHHH
Confidence            479999999999999998877777776     4455666532222221    111211111     11111122222221


Q ss_pred             -------hhhhcCCCCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCC
Q 029593           78 -------GFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKAT  147 (191)
Q Consensus        78 -------~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~  147 (191)
                             ..+.... .....+.||+.++++.|+++|+   ++||+....++.+++++++..+|+.+++++..+.      
T Consensus        75 ~~~~~~~~~~~~~~-~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~------  147 (226)
T PRK13222         75 KLRELFDRHYAENV-AGGSRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFSVVIGGDSLPN------  147 (226)
T ss_pred             HHHHHHHHHHHHhc-cccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCccEEEcCCCCCC------
Confidence                   1122211 1236799999999999999886   9999999999999999999999999999887765      


Q ss_pred             CCCCCCCCCCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          148 RPDEFPVLLKPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       148 ~~~~~~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                              .||+|.+++.++++++++|++|++|||+.+|.
T Consensus       148 --------~kp~~~~~~~~~~~~~~~~~~~i~igD~~~Di  179 (226)
T PRK13222        148 --------KKPDPAPLLLACEKLGLDPEEMLFVGDSRNDI  179 (226)
T ss_pred             --------CCcChHHHHHHHHHcCCChhheEEECCCHHHH
Confidence                    49999999999999999999999999999875

>PRK13223 phosphoglycolate phosphatase; Provisional

Probab=99.89  E-value=4.9e-23  Score=154.48  Aligned_cols=161  Identities=22%  Similarity=0.263  Sum_probs=115.6

Q ss_pred             CceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccHHHH-HHc-C-----CCCCc---
Q 029593            4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGL-RAL-G-----YDIGA---   73 (191)
Q Consensus         4 ~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~-----~~~~~---   73 (191)
                      .+|+|+|||||||+|+.+.+..++..     +.++.|.+........    ...+.....+ ..+ .     ...+.   
T Consensus        12 ~~k~viFDlDGTL~Ds~~~~~~a~~~-----~~~~~g~~~~~~~~~~----~~~g~~~~~~~~~~l~~~~~~~~~~~~~~   82 (272)
T PRK13223         12 LPRLVMFDLDGTLVDSVPDLAAAVDR-----MLLELGRPPAGLEAVR----HWVGNGAPVLVRRALAGSIDHDGVDDELA   82 (272)
T ss_pred             cCCEEEEcCCCccccCHHHHHHHHHH-----HHHHcCCCCCCHHHHH----HHhChhHHHHHHHHhcccccccCCCHHHH
Confidence            48999999999999999988888886     5566777643222211    1122221111 110 0     01111   


Q ss_pred             cchhhhhhcCC--CCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCC
Q 029593           74 DDYHGFVHGRL--PYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATR  148 (191)
Q Consensus        74 ~~~~~~~~~~~--~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~  148 (191)
                      +.+...+.+..  ......++||+.++|+.|+++|+   ++||++...++..++.+++..+|+.+++++....       
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f~~i~~~d~~~~-------  155 (272)
T PRK13223         83 EQALALFMEAYADSHELTVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYFRWIIGGDTLPQ-------  155 (272)
T ss_pred             HHHHHHHHHHHHhcCcCCccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhCeEEEecCCCCC-------
Confidence            11222222111  12235789999999999999886   9999999999999999999999999999887665       


Q ss_pred             CCCCCCCCCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          149 PDEFPVLLKPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       149 ~~~~~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                             .||+|.+++.+++++|++|++|++|||+.+|.
T Consensus       156 -------~Kp~p~~~~~~~~~~g~~~~~~l~IGD~~~Di  187 (272)
T PRK13223        156 -------KKPDPAALLFVMKMAGVPPSQSLFVGDSRSDV  187 (272)
T ss_pred             -------CCCCcHHHHHHHHHhCCChhHEEEECCCHHHH
Confidence                   49999999999999999999999999999884

>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548

Probab=99.89  E-value=8.3e-23  Score=146.68  Aligned_cols=83  Identities=20%  Similarity=0.199  Sum_probs=75.0

Q ss_pred             CCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q 029593           90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLA  166 (191)
Q Consensus        90 ~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~  166 (191)
                      .+.++..++|+.|+++|+   |+||++...++..++++|+..+|+.++++++...               ||+|..+..+
T Consensus       106 ~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~---------------KP~p~~~~~~  170 (197)
T TIGR01548       106 ETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILFPVQIWMEDCPP---------------KPNPEPLILA  170 (197)
T ss_pred             ccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhCCEEEeecCCCC---------------CcCHHHHHHH
Confidence            344556999999999887   9999999999999999999999999999887653               9999999999


Q ss_pred             HHHcCCCCCceEEecCccccc
Q 029593          167 LHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       167 ~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      ++.++++|++|++|||+++|.
T Consensus       171 ~~~~~~~~~~~i~vGD~~~Di  191 (197)
T TIGR01548       171 AKALGVEACHAAMVGDTVDDI  191 (197)
T ss_pred             HHHhCcCcccEEEEeCCHHHH
Confidence            999999999999999999874

All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.

>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase

Probab=99.89  E-value=1.7e-22  Score=145.71  Aligned_cols=160  Identities=19%  Similarity=0.229  Sum_probs=109.1

Q ss_pred             eEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHH--HHHHHHHHHHH-------h----cccH-----HHH---
Q 029593            6 NCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETK--ASSLRVELFKA-------Y----GSTL-----AGL---   64 (191)
Q Consensus         6 k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~-------~----~~~~-----~~~---   64 (191)
                      |+|+||+||||+|+...+..++.+     +.+..|.+...  ........+..       +    +...     ..+   
T Consensus         1 k~viFDlDGTL~d~~~~~~~a~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~   75 (203)
T TIGR02252         1 KLITFDAVGTLLALKEPVGEVYCE-----IARKYGVEVSPDELEQAFRRAFKAMSEAFPNFGFSSGLTPQQWWQKLVRDT   75 (203)
T ss_pred             CeEEEecCCceeeeCCCHHHHHHH-----HHHHhCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCCHHHHHHHHHHHH
Confidence            689999999999999888878877     44566775322  11111111111       0    1111     111   


Q ss_pred             -HHcCCCCCccchhhh---hhcC-CCCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeec
Q 029593           65 -RALGYDIGADDYHGF---VHGR-LPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICF  136 (191)
Q Consensus        65 -~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~  136 (191)
                       ...+. ...+.+...   +... .......++||+.++|..|+++|+   |+||++.. ++..++.+++..+|+.++++
T Consensus        76 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~fd~i~~s  153 (203)
T TIGR02252        76 FGRAGV-PDPESFEKIFEELYSYFATPEPWQVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYFDFVVTS  153 (203)
T ss_pred             HHhcCC-CCchhHHHHHHHHHHHhcCCCcceeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhcceEEee
Confidence             11111 112222221   1111 112335789999999999999886   99998765 57789999999999999999


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHcCCCCCceEEecCcc-cc
Q 029593          137 ETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHAVRQSSFL-IF  186 (191)
Q Consensus       137 ~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~-~~  186 (191)
                      ++.+.              .||+|.++..+++++|++|++|++|||++ +|
T Consensus       154 ~~~~~--------------~KP~~~~~~~~~~~~~~~~~~~~~IgD~~~~D  190 (203)
T TIGR02252       154 YEVGA--------------EKPDPKIFQEALERAGISPEEALHIGDSLRND  190 (203)
T ss_pred             cccCC--------------CCCCHHHHHHHHHHcCCChhHEEEECCCchHH
Confidence            88776              49999999999999999999999999997 66

Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.

>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254

Probab=99.89  E-value=4e-22  Score=145.72  Aligned_cols=162  Identities=22%  Similarity=0.250  Sum_probs=112.3

Q ss_pred             ceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHH--HHH---HHHHHHh--cc-cHH---------HHHHc
Q 029593            5 FNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKAS--SLR---VELFKAY--GS-TLA---------GLRAL   67 (191)
Q Consensus         5 ~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~--~~~---~~~~~~~--~~-~~~---------~~~~~   67 (191)
                      +|+|+||+||||+|+...+..++.+.     .+..|.+.....  ...   ...+..+  +. ...         ....+
T Consensus         1 ~k~viFD~DGTL~d~~~~~~~~~~~~-----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (224)
T TIGR02254         1 YKTLLFDLDDTILDFQAAEALALRLL-----FEDQGIPLTEDMFAQYKEINQGLWRAYEEGKITKDEVVNTRFSALLKEY   75 (224)
T ss_pred             CCEEEEcCcCcccccchHHHHHHHHH-----HHHhCCCccHHHHHHHHHHhHHHHHHHHcCCCCHHHHHHHHHHHHHHHh
Confidence            58999999999999998877777763     345565432111  100   0111111  10 000         11122


Q ss_pred             CCCCCccchhhhhhcCCCCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCC
Q 029593           68 GYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLS  144 (191)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~  144 (191)
                      +.+...+.+...+.... .....++||+.++|+.|+++ +   ++||+....+...++.+++..+|+.++++++.+.   
T Consensus        76 ~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~fd~i~~~~~~~~---  150 (224)
T TIGR02254        76 NTEADEALLNQKYLRFL-EEGHQLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFFDDIFVSEDAGI---  150 (224)
T ss_pred             CCCCcHHHHHHHHHHHH-hccCeeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhcCEEEEcCccCC---
Confidence            22221112333232211 12357899999999999988 5   9999999999999999999999999999988776   


Q ss_pred             CCCCCCCCCCCCCCCHHHHHHHHHHc-CCCCCceEEecCcc-ccc
Q 029593          145 KATRPDEFPVLLKPSMDAMKLALHVA-NVDPRHAVRQSSFL-IFY  187 (191)
Q Consensus       145 ~~~~~~~~~~~~kp~~~~~~~~~~~~-~~~p~~~i~iGDs~-~~~  187 (191)
                                 .||+|.++..+++++ +++|++|++|||++ +|.
T Consensus       151 -----------~KP~~~~~~~~~~~~~~~~~~~~v~igD~~~~di  184 (224)
T TIGR02254       151 -----------QKPDKEIFNYALERMPKFSKEEVLMIGDSLTADI  184 (224)
T ss_pred             -----------CCCCHHHHHHHHHHhcCCCchheEEECCCcHHHH
Confidence                       499999999999999 99999999999997 564

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.

>PRK13225 phosphoglycolate phosphatase; Provisional

Probab=99.88  E-value=4.7e-22  Score=148.82  Aligned_cols=156  Identities=13%  Similarity=0.162  Sum_probs=110.6

Q ss_pred             CceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccH-HHHHHcCCC-CCccc----hh
Q 029593            4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTL-AGLRALGYD-IGADD----YH   77 (191)
Q Consensus         4 ~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~----~~   77 (191)
                      .+++++|||||||+|+.+.+..++.+     ..+++|........    .....+... ..+..++.+ ...++    +.
T Consensus        61 ~~k~vIFDlDGTLiDS~~~~~~a~~~-----~~~~~G~~~~~~~~----~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~  131 (273)
T PRK13225         61 TLQAIIFDFDGTLVDSLPTVVAIANA-----HAPDFGYDPIDERD----YAQLRQWSSRTIVRRAGLSPWQQARLLQRVQ  131 (273)
T ss_pred             hcCEEEECCcCccccCHHHHHHHHHH-----HHHHCCCCCCCHHH----HHHHhCccHHHHHHHcCCCHHHHHHHHHHHH
Confidence            58999999999999999988888887     44666764222211    111122111 122222211 01111    11


Q ss_pred             hhhhcCCCCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCC
Q 029593           78 GFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPV  154 (191)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~  154 (191)
                      ..+...  .....++||+.++|+.|+++|+   |+||+....+...++++|+..+|+.+++++..               
T Consensus       132 ~~~~~~--~~~~~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~~vi~~~~~---------------  194 (273)
T PRK13225        132 RQLGDC--LPALQLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFSVVQAGTPI---------------  194 (273)
T ss_pred             HHHHhh--cccCCcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheEEEEecCCC---------------
Confidence            222221  2346889999999999999987   99999999999999999999999998876653               


Q ss_pred             CCCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          155 LLKPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       155 ~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                        ++++..+..++++++++|++|++|||+.+|.
T Consensus       195 --~~k~~~~~~~l~~~~~~p~~~l~IGDs~~Di  225 (273)
T PRK13225        195 --LSKRRALSQLVAREGWQPAAVMYVGDETRDV  225 (273)
T ss_pred             --CCCHHHHHHHHHHhCcChhHEEEECCCHHHH
Confidence              3456899999999999999999999999874

>PRK09449 dUMP phosphatase; Provisional

Probab=99.87  E-value=1.8e-21  Score=142.35  Aligned_cols=83  Identities=23%  Similarity=0.252  Sum_probs=75.3

Q ss_pred             CCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q 029593           89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKL  165 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~  165 (191)
                      ..++||+.++|+.|++ |+   ++||+....++..++++|+..+|+.++++++.+.              .||+|++|..
T Consensus        94 ~~~~~g~~~~L~~L~~-~~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~~~--------------~KP~p~~~~~  158 (224)
T PRK09449         94 CTPLPGAVELLNALRG-KVKMGIITNGFTELQQVRLERTGLRDYFDLLVISEQVGV--------------AKPDVAIFDY  158 (224)
T ss_pred             CccCccHHHHHHHHHh-CCeEEEEeCCcHHHHHHHHHhCChHHHcCEEEEECccCC--------------CCCCHHHHHH
Confidence            6789999999999994 55   9999999999999999999999999999998876              4999999999


Q ss_pred             HHHHcCCC-CCceEEecCcc-cc
Q 029593          166 ALHVANVD-PRHAVRQSSFL-IF  186 (191)
Q Consensus       166 ~~~~~~~~-p~~~i~iGDs~-~~  186 (191)
                      +++++|+. +++|++|||++ +|
T Consensus       159 ~~~~~~~~~~~~~~~vgD~~~~D  181 (224)
T PRK09449        159 ALEQMGNPDRSRVLMVGDNLHSD  181 (224)
T ss_pred             HHHHcCCCCcccEEEEcCCcHHH
Confidence            99999985 58999999997 46

>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A

Probab=99.87  E-value=8.5e-23  Score=143.40  Aligned_cols=159  Identities=28%  Similarity=0.410  Sum_probs=110.0

Q ss_pred             EEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccHHH-HHHcCCCCCccchhhhhhcCCCC
Q 029593            8 LVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAG-LRALGYDIGADDYHGFVHGRLPY   86 (191)
Q Consensus         8 iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~   86 (191)
                      |+||+||||+++...+..++...    +.+.++.+.. .................. +...+  .....+.+.+.+....
T Consensus         1 iifD~dgtL~d~~~~~~~~~~~~----~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~   73 (176)
T PF13419_consen    1 IIFDLDGTLVDTDPAIFRALQRL----ALEEFGLEIS-AEELRELFGKSYEEALERLLERFG--IDPEEIQELFREYNLE   73 (176)
T ss_dssp             EEEESBTTTEEHHHHHHHHHHHH----HHHHTTHHHH-HHHHHHHTTSHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHH
T ss_pred             cEEECCCCcEeCHHHHHHHHHHH----HHHHhCCCCC-HHHHHHHhCCCHHHHHHHhhhccc--hhHHHHHHHhhhhhhh
Confidence            79999999999988666666652    3444454421 222111111111111110 01111  0122233333222112


Q ss_pred             CCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHH
Q 029593           87 DLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAM  163 (191)
Q Consensus        87 ~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~  163 (191)
                      ....++|++.++|..|+++|+   ++||++...++..++++|+..+|+.++++++.+.              .||++.+|
T Consensus        74 ~~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~--------------~Kp~~~~~  139 (176)
T PF13419_consen   74 SKLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYFDEIISSDDVGS--------------RKPDPDAY  139 (176)
T ss_dssp             GGEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGCSEEEEGGGSSS--------------STTSHHHH
T ss_pred             hccchhhhhhhhhhhcccccceeEEeecCCcccccccccccccccccccccccchhhh--------------hhhHHHHH
Confidence            347899999999999998886   9999999999999999999999999999998877              49999999


Q ss_pred             HHHHHHcCCCCCceEEecCccccc
Q 029593          164 KLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       164 ~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      +.++++++++|++|++|||++.|.
T Consensus       140 ~~~~~~~~~~p~~~~~vgD~~~d~  163 (176)
T PF13419_consen  140 RRALEKLGIPPEEILFVGDSPSDV  163 (176)
T ss_dssp             HHHHHHHTSSGGGEEEEESSHHHH
T ss_pred             HHHHHHcCCCcceEEEEeCCHHHH
Confidence            999999999999999999998763

...

>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase

Probab=99.87  E-value=1e-21  Score=138.47  Aligned_cols=80  Identities=15%  Similarity=0.209  Sum_probs=73.5

Q ss_pred             CCCCChhHHHHHHhhccCcE-EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q 029593           88 LIKPDPQLRNLLCSITQRKI-IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLA  166 (191)
Q Consensus        88 ~~~~~~~~~~~l~~l~~~g~-i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~  166 (191)
                      .+.++||+.++|+.     + |+||++...++..++++++..+|+.++++++++.              .||+|+.|..+
T Consensus        88 ~~~~~~g~~~~L~~-----~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~~~--------------~KP~p~~f~~~  148 (175)
T TIGR01493        88 NLPPWPDSAAALAR-----VAILSNASHWAFDQFAQQAGLPWYFDRAFSVDTVRA--------------YKPDPVVYELV  148 (175)
T ss_pred             cCCCCCchHHHHHH-----HhhhhCCCHHHHHHHHHHCCCHHHHhhhccHhhcCC--------------CCCCHHHHHHH
Confidence            36799999999983     5 9999999999999999999999999999998776              49999999999


Q ss_pred             HHHcCCCCCceEEecCcccc
Q 029593          167 LHVANVDPRHAVRQSSFLIF  186 (191)
Q Consensus       167 ~~~~~~~p~~~i~iGDs~~~  186 (191)
                      ++++|++|++|++|||+..|
T Consensus       149 ~~~~~~~p~~~l~vgD~~~D  168 (175)
T TIGR01493       149 FDTVGLPPDRVLMVAAHQWD  168 (175)
T ss_pred             HHHHCCCHHHeEeEecChhh
Confidence            99999999999999999866

The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o

>PLN02779 haloacid dehalogenase-like hydrolase family protein

Probab=99.87  E-value=9e-22  Score=148.55  Aligned_cols=163  Identities=19%  Similarity=0.240  Sum_probs=105.1

Q ss_pred             CceEEEEecCCCCCCCh-HHHHHHHHHHHHHHHHHHhCCCHH-HHHHHHHHHHHHhcccHHH----HHHcCCC-------
Q 029593            4 PFNCLVFDLDDTLYPSE-TGIAAAVKRNIEGFLIEKCGFSET-KASSLRVELFKAYGSTLAG----LRALGYD-------   70 (191)
Q Consensus         4 ~~k~iifD~DGTL~~~~-~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~----~~~~~~~-------   70 (191)
                      ++++|+|||||||+|+. ..+..+|.++     ++.+|.+.. ........... .+.....    +...+..       
T Consensus        39 ~~k~VIFDlDGTLvDS~~~~~~~a~~~~-----l~~~G~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~  112 (286)
T PLN02779         39 LPEALLFDCDGVLVETERDGHRVAFNDA-----FKEFGLRPVEWDVELYDELLN-IGGGKERMTWYFNENGWPTSTIEKA  112 (286)
T ss_pred             CCcEEEEeCceeEEccccHHHHHHHHHH-----HHHcCCCCCCCCHHHHHHHHc-cCCChHHHHHHHHHcCCCccccccC
Confidence            68999999999999999 8888888874     455676311 00110000111 2211111    1010110       


Q ss_pred             -CCccc-------hh----hhhhcCCCCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcc---cce
Q 029593           71 -IGADD-------YH----GFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADC---FDQ  132 (191)
Q Consensus        71 -~~~~~-------~~----~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~---f~~  132 (191)
                       ...+.       +.    ..+........+.++||+.++|+.|+++|+   |+||++...+..+++.++...+   |+.
T Consensus       113 ~~~~e~~~~~~~~~~~~~~~~y~~~~~~~~~~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~  192 (286)
T PLN02779        113 PKDEEERKELVDSLHDRKTELFKELIESGALPLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDV  192 (286)
T ss_pred             CccchhhHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEE
Confidence             01111       11    111111111235899999999999999987   9999999998888887643333   343


Q ss_pred             eeecccCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          133 IICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       133 i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      + ++++.+.              .||+|+++..+++++|++|++|++|||+++|.
T Consensus       193 v-~~~~~~~--------------~KP~p~~~~~a~~~~~~~p~~~l~IGDs~~Di  232 (286)
T PLN02779        193 F-AGDDVPK--------------KKPDPDIYNLAAETLGVDPSRCVVVEDSVIGL  232 (286)
T ss_pred             E-eccccCC--------------CCCCHHHHHHHHHHhCcChHHEEEEeCCHHhH
Confidence            4 6666554              59999999999999999999999999999875

>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated

Probab=99.86  E-value=2.3e-21  Score=155.40  Aligned_cols=162  Identities=14%  Similarity=0.158  Sum_probs=110.1

Q ss_pred             CceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHH-hCCCHHHHHHHHHHHHHHhcccHHH-HHHcCCCCC---ccchhh
Q 029593            4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEK-CGFSETKASSLRVELFKAYGSTLAG-LRALGYDIG---ADDYHG   78 (191)
Q Consensus         4 ~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~   78 (191)
                      ++++|+|||||||+|+.+.+..+|.+++.++.... .+.... ...    .....|..... ...+.....   .+.+..
T Consensus       240 m~k~vIFDlDGTLiDs~~~~~~a~~~~~~~~~~~~~~~~~~~-~~~----~~~~~G~~~~~~~~~l~~~~~~~~~~~~~~  314 (459)
T PRK06698        240 MLQALIFDMDGTLFQTDKILELSLDDTFDHLRSLQLWDTVTP-IDK----YREIMGVPLPKVWEALLPDHSLEIREQTDA  314 (459)
T ss_pred             hhhheeEccCCceecchhHHHHHHHHHHHHHhhhcccCCCCC-HHH----HHHHcCCChHHHHHHHhhhcchhHHHHHHH
Confidence            57999999999999999999999988765542111 111110 111    11222222111 111111111   111222


Q ss_pred             hh----hcCCCCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCC
Q 029593           79 FV----HGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDE  151 (191)
Q Consensus        79 ~~----~~~~~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~  151 (191)
                      .+    .........+++||+.++|+.|+++|+   |+||+....++..++.+++..+|+.++++++...          
T Consensus       315 ~~~~~~~~~~~~~~~~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~~i~~~d~v~~----------  384 (459)
T PRK06698        315 YFLERLIENIKSGKGALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWVTETFSIEQINS----------  384 (459)
T ss_pred             HHHHHhHHHHhhcCCCcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhcceeEecCCCCC----------
Confidence            22    111112346889999999999999887   9999999999999999999999999999887643          


Q ss_pred             CCCCCCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          152 FPVLLKPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       152 ~~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                           ||+|+.+..++++++  |++|++|||+++|.
T Consensus       385 -----~~kP~~~~~al~~l~--~~~~v~VGDs~~Di  413 (459)
T PRK06698        385 -----LNKSDLVKSILNKYD--IKEAAVVGDRLSDI  413 (459)
T ss_pred             -----CCCcHHHHHHHHhcC--cceEEEEeCCHHHH
Confidence                 677889999998864  79999999999875

>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E

Probab=99.86  E-value=5.6e-21  Score=131.98  Aligned_cols=144  Identities=20%  Similarity=0.210  Sum_probs=102.5

Q ss_pred             EEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccHHHHHHcCCCCCccchhhhhhcCCCC
Q 029593            7 CLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLRALGYDIGADDYHGFVHGRLPY   86 (191)
Q Consensus         7 ~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (191)
                      +|+||+||||+|+.+.+..++...+     ++.+.+....       ....+.....+.....  ..+++.. +     .
T Consensus         1 ~iifD~DGTL~d~~~~~~~~~~~~~-----~~~~~~~~~~-------~~~~g~~~~~~~~~~~--~~~~~~~-~-----~   60 (154)
T TIGR01549         1 AILFDIDGTLVDSSFAIRRAFEETL-----EEFGEDFQAL-------KALRGLAEELLYRIAT--SFEELLG-Y-----D   60 (154)
T ss_pred             CeEecCCCcccccHHHHHHHHHHHH-----HHhcccHHHH-------HHHHccChHHHHHHHH--HHHHHhC-c-----c
Confidence            4899999999999988888888744     3445432211       1111111111111000  0111111 1     1


Q ss_pred             CCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHH
Q 029593           87 DLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAM  163 (191)
Q Consensus        87 ~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~  163 (191)
                      ......||+.++++.|+++|+   ++||++...+...++.+ +..+|+.++++++.+ .              ||+|.++
T Consensus        61 ~~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~f~~i~~~~~~~-~--------------Kp~~~~~  124 (154)
T TIGR01549        61 AEEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDYFDLILGSDEFG-A--------------KPEPEIF  124 (154)
T ss_pred             hhheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhcCcEEEecCCCC-C--------------CcCHHHH
Confidence            234567999999999998886   99999999999999988 888999999887765 3              9999999


Q ss_pred             HHHHHHcCCCCCceEEecCccccc
Q 029593          164 KLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       164 ~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      ..++++++++| +|++|||+..|.
T Consensus       125 ~~~~~~~~~~~-~~l~iGDs~~Di  147 (154)
T TIGR01549       125 LAALESLGLPP-EVLHVGDNLNDI  147 (154)
T ss_pred             HHHHHHcCCCC-CEEEEeCCHHHH
Confidence            99999999999 999999998774

HAD subfamilies caused by an overly broad single model.

>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase

Probab=99.86  E-value=2.8e-21  Score=140.13  Aligned_cols=86  Identities=19%  Similarity=0.135  Sum_probs=72.6

Q ss_pred             CCCCChhHHHHHHhhccCcE---EEecCChHH--HHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHH
Q 029593           88 LIKPDPQLRNLLCSITQRKI---IFTNSDRNH--AITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDA  162 (191)
Q Consensus        88 ~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~--~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~  162 (191)
                      ...++|++.++|+.|+++|+   ++||+....  ....+...++..+|+.++++++.+.              .||+|.+
T Consensus        92 ~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~--------------~KP~p~~  157 (211)
T TIGR02247        92 NTKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALFDAVVESCLEGL--------------RKPDPRI  157 (211)
T ss_pred             ccccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhCCEEEEeeecCC--------------CCCCHHH
Confidence            46789999999999999987   899986543  3334455678889999999887776              4999999


Q ss_pred             HHHHHHHcCCCCCceEEecCccccc
Q 029593          163 MKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       163 ~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      |..+++++|++|++|++|||+..|.
T Consensus       158 ~~~~~~~~g~~~~~~l~i~D~~~di  182 (211)
T TIGR02247       158 YQLMLERLGVAPEECVFLDDLGSNL  182 (211)
T ss_pred             HHHHHHHcCCCHHHeEEEcCCHHHH
Confidence            9999999999999999999998763

These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.

>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED

Probab=99.85  E-value=1.2e-21  Score=138.95  Aligned_cols=83  Identities=28%  Similarity=0.362  Sum_probs=75.0

Q ss_pred             CCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q 029593           89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKL  165 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~  165 (191)
                      ..+.||+.++|+.|+++|+   ++||+.... .....++|+..+|+.++++++.+.              +||+|..++.
T Consensus        84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f~~i~~~~~~~~--------------~KP~~~~~~~  148 (183)
T TIGR01509        84 LKPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLFDVVIFSGDVGR--------------GKPDPDIYLL  148 (183)
T ss_pred             CccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHCCEEEEcCCCCC--------------CCCCHHHHHH
Confidence            5889999999999999885   999999887 666666999999999999887766              5999999999


Q ss_pred             HHHHcCCCCCceEEecCcccc
Q 029593          166 ALHVANVDPRHAVRQSSFLIF  186 (191)
Q Consensus       166 ~~~~~~~~p~~~i~iGDs~~~  186 (191)
                      ++++++++|++|++|||++.|
T Consensus       149 ~~~~~~~~~~~~~~vgD~~~d  169 (183)
T TIGR01509       149 ALKKLGLKPEECLFVDDSPAG  169 (183)
T ss_pred             HHHHcCCCcceEEEEcCCHHH
Confidence            999999999999999999876

HAD subfamilies caused by an overly broad single model.

>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=99.85  E-value=1.3e-20  Score=138.25  Aligned_cols=85  Identities=27%  Similarity=0.371  Sum_probs=78.6

Q ss_pred             CCCCChhHHHHHHhhccC-cE-EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q 029593           88 LIKPDPQLRNLLCSITQR-KI-IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKL  165 (191)
Q Consensus        88 ~~~~~~~~~~~l~~l~~~-g~-i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~  165 (191)
                      .+++.|++.+.|..++++ .+ ++||+....+...++++|+.++||.++.+++.+.              .||+|.+|+.
T Consensus        97 ~~~~~~~~~~~L~~l~~~~~l~ilTNg~~~~~~~~l~~~gl~~~Fd~v~~s~~~g~--------------~KP~~~~f~~  162 (229)
T COG1011          97 LLPDYPEALEALKELGKKYKLGILTNGARPHQERKLRQLGLLDYFDAVFISEDVGV--------------AKPDPEIFEY  162 (229)
T ss_pred             hCccChhHHHHHHHHHhhccEEEEeCCChHHHHHHHHHcCChhhhheEEEeccccc--------------CCCCcHHHHH
Confidence            378999999999999988 23 9999999999999999999999999999999987              4999999999


Q ss_pred             HHHHcCCCCCceEEecCcccc
Q 029593          166 ALHVANVDPRHAVRQSSFLIF  186 (191)
Q Consensus       166 ~~~~~~~~p~~~i~iGDs~~~  186 (191)
                      +++++|++|++|++|||++..
T Consensus       163 ~~~~~g~~p~~~l~VgD~~~~  183 (229)
T COG1011         163 ALEKLGVPPEEALFVGDSLEN  183 (229)
T ss_pred             HHHHcCCCcceEEEECCChhh
Confidence            999999999999999999753

>PRK10748 flavin mononucleotide phosphatase; Provisional

Probab=99.85  E-value=4.7e-20  Score=136.02  Aligned_cols=163  Identities=17%  Similarity=0.123  Sum_probs=103.8

Q ss_pred             CceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCC---CHHHHHHHHHHHHH-----------Hhccc-HHHHHHcC
Q 029593            4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGF---SETKASSLRVELFK-----------AYGST-LAGLRALG   68 (191)
Q Consensus         4 ~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~-----------~~~~~-~~~~~~~~   68 (191)
                      ++|+|+||+||||+|+.+.+..++.+++...-...-+.   .......+...+..           ..+.. ...+...+
T Consensus         9 ~~k~iiFDlDGTL~D~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g   88 (238)
T PRK10748          9 RISALTFDLDDTLYDNRPVILRTEQEALAFVQNYHPALRSFQNEDLQRLRQALREAEPEIYHDVTRWRWRAIEQAMLDAG   88 (238)
T ss_pred             CceeEEEcCcccccCChHHHHHHHHHHHHHHHHhCcchhhCCHHHHHHHHHHHHHhCchhhCcHHHHHHHHHHHHHHHcC
Confidence            57999999999999999988887776553321000011   11111111110000           00000 11122223


Q ss_pred             CCCCcc-----chhhhhhcCCCCCCCCCChhHHHHHHhhccCc-E-EEecCChHHHHHHHhhcCCCcccceeeecccCCC
Q 029593           69 YDIGAD-----DYHGFVHGRLPYDLIKPDPQLRNLLCSITQRK-I-IFTNSDRNHAITCLKRLEIADCFDQIICFETMNP  141 (191)
Q Consensus        69 ~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g-~-i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~  141 (191)
                      .+....     .....+...  ...+.++||+.++|+.|++.. + ++||++..     ++.+|+..+|+.++++++.+.
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~gv~~~L~~L~~~~~l~i~Tn~~~~-----~~~~gl~~~fd~i~~~~~~~~  161 (238)
T PRK10748         89 LSAEEASAGADAAMINFAKW--RSRIDVPQATHDTLKQLAKKWPLVAITNGNAQ-----PELFGLGDYFEFVLRAGPHGR  161 (238)
T ss_pred             CCHHHHHHHHHHHHHHHHHH--hhcCCCCccHHHHHHHHHcCCCEEEEECCCch-----HHHCCcHHhhceeEecccCCc
Confidence            221111     001111111  133689999999999998762 2 99998875     478899999999999988776


Q ss_pred             CCCCCCCCCCCCCCCCCCHHHHHHHHHHcCCCCCceEEecCcc-ccc
Q 029593          142 NLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHAVRQSSFL-IFY  187 (191)
Q Consensus       142 ~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~-~~~  187 (191)
                                    .||+|.+|..+++++|++|++|+||||++ .|.
T Consensus       162 --------------~KP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di  194 (238)
T PRK10748        162 --------------SKPFSDMYHLAAEKLNVPIGEILHVGDDLTTDV  194 (238)
T ss_pred             --------------CCCcHHHHHHHHHHcCCChhHEEEEcCCcHHHH
Confidence                          49999999999999999999999999995 663

>PRK09456 ?-D-glucose-1-phosphatase; Provisional

Probab=99.84  E-value=6.1e-20  Score=131.99  Aligned_cols=84  Identities=14%  Similarity=0.181  Sum_probs=74.2

Q ss_pred             CCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhh-cCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHH
Q 029593           89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKR-LEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMK  164 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~-~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~  164 (191)
                      ..++||+.++++.|+++|+   ++||++.......+.. .++..+|+.++++++.+.              .||+|++|.
T Consensus        83 ~~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~--------------~KP~p~~~~  148 (199)
T PRK09456         83 VALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQDLGM--------------RKPEARIYQ  148 (199)
T ss_pred             hccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEecccCC--------------CCCCHHHHH
Confidence            4689999999999999986   9999988776665544 478889999999998887              499999999


Q ss_pred             HHHHHcCCCCCceEEecCcccc
Q 029593          165 LALHVANVDPRHAVRQSSFLIF  186 (191)
Q Consensus       165 ~~~~~~~~~p~~~i~iGDs~~~  186 (191)
                      .+++++|++|++|++|||+..|
T Consensus       149 ~~~~~~~~~p~~~l~vgD~~~d  170 (199)
T PRK09456        149 HVLQAEGFSAADAVFFDDNADN  170 (199)
T ss_pred             HHHHHcCCChhHeEEeCCCHHH
Confidence            9999999999999999999876

>TIGR00338 serB phosphoserine phosphatase SerB

Probab=99.83  E-value=7.2e-20  Score=133.49  Aligned_cols=163  Identities=13%  Similarity=0.115  Sum_probs=100.9

Q ss_pred             CCceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccHHHH----HHcCCCCCccchhh
Q 029593            3 SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGL----RALGYDIGADDYHG   78 (191)
Q Consensus         3 ~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~   78 (191)
                      +++++++|||||||++++.     +..     +.+.+|...... ....+...........+    ..+ .....+.+..
T Consensus        12 ~~~k~iiFD~DGTL~~~~~-----~~~-----l~~~~g~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~   79 (219)
T TIGR00338        12 RSKKLVVFDMDSTLINAET-----IDE-----IAKIAGVEEEVS-EITERAMRGELDFKASLRERVALL-KGLPVELLKE   79 (219)
T ss_pred             ccCCEEEEeCcccCCCchH-----HHH-----HHHHhCCHHHHH-HHHHHHHcCCCCHHHHHHHHHHHh-CCCCHHHHHH
Confidence            4689999999999999853     222     334455542211 11111111100001111    111 1222222222


Q ss_pred             hhhcCCCCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCC
Q 029593           79 FVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVL  155 (191)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~  155 (191)
                      ...      ..++.||+.++++.|+++|+   ++||+....++.+++.+++..+|+..+..++..   +++.+ ......
T Consensus        80 ~~~------~~~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~---~~~~~-~~~~~~  149 (219)
T TIGR00338        80 VRE------NLPLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVEDGK---LTGLV-EGPIVD  149 (219)
T ss_pred             HHh------cCCcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEEEECCE---EEEEe-cCcccC
Confidence            222      25789999999999999887   999999999999999999988876533222100   00000 001122


Q ss_pred             CCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          156 LKPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       156 ~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      ++|++.+++.++++++++|++|++||||.+|.
T Consensus       150 ~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di  181 (219)
T TIGR00338       150 ASYKGKTLLILLRKEGISPENTVAVGDGANDL  181 (219)
T ss_pred             CcccHHHHHHHHHHcCCCHHHEEEEECCHHHH
Confidence            47789999999999999999999999999985

Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=99.83  E-value=2.9e-20  Score=160.66  Aligned_cols=160  Identities=18%  Similarity=0.223  Sum_probs=115.0

Q ss_pred             CceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccHHHH-H----HcCC-CCCccc--
Q 029593            4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGL-R----ALGY-DIGADD--   75 (191)
Q Consensus         4 ~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~-~~~~~~--   75 (191)
                      ++++|+|||||||+|+...+..++.+     +.++.|++.....     +....+...... .    ..+. ....+.  
T Consensus        74 ~ikaVIFDlDGTLiDS~~~~~~a~~~-----~~~~~G~~it~e~-----~~~~~G~~~~~~~~~~~~~~~l~~~~~~~~~  143 (1057)
T PLN02919         74 KVSAVLFDMDGVLCNSEEPSRRAAVD-----VFAEMGVEVTVED-----FVPFMGTGEANFLGGVASVKGVKGFDPDAAK  143 (1057)
T ss_pred             CCCEEEECCCCCeEeChHHHHHHHHH-----HHHHcCCCCCHHH-----HHHHhCCCHHHHHHHHHHhcCCCCCCHHHHH
Confidence            68999999999999999988888887     4455676532211     112223222111 1    1111 112222  


Q ss_pred             --hhhhhhcCC-CCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCC-cccceeeecccCCCCCCCCCC
Q 029593           76 --YHGFVHGRL-PYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIA-DCFDQIICFETMNPNLSKATR  148 (191)
Q Consensus        76 --~~~~~~~~~-~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~-~~f~~i~~~~~~~~~~~~~~~  148 (191)
                        +...+.... ......++||+.++|+.|+++|+   |+||+....++..++++++. .+|+.++++++...       
T Consensus       144 ~~~~~~~~~~~~~~~~~~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd~iv~~~~~~~-------  216 (1057)
T PLN02919        144 KRFFEIYLEKYAKPNSGIGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFDAIVSADAFEN-------  216 (1057)
T ss_pred             HHHHHHHHHHhhhcccCccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCCEEEECccccc-------
Confidence              111221111 11123579999999999999987   99999999999999999996 78999999998876       


Q ss_pred             CCCCCCCCCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          149 PDEFPVLLKPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       149 ~~~~~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                             .||+|++|..+++++++.|++|++|||++.|.
T Consensus       217 -------~KP~Pe~~~~a~~~lgv~p~e~v~IgDs~~Di  248 (1057)
T PLN02919        217 -------LKPAPDIFLAAAKILGVPTSECVVIEDALAGV  248 (1057)
T ss_pred             -------CCCCHHHHHHHHHHcCcCcccEEEEcCCHHHH
Confidence                   49999999999999999999999999998773

>PHA02597 30

Probab=99.79  E-value=4.6e-19  Score=127.24  Aligned_cols=149  Identities=7%  Similarity=0.004  Sum_probs=90.9

Q ss_pred             ceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccHHHHHHcCCCC-CccchhhhhhcC
Q 029593            5 FNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLRALGYDI-GADDYHGFVHGR   83 (191)
Q Consensus         5 ~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~   83 (191)
                      +|+|+|||||||+|+..    ++.+     +.++.|.+.......   .........  ...++.+. ..+++...+...
T Consensus         2 ~k~viFDlDGTLiD~~~----~~~~-----~~~~~g~~~~~~~~~---~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~   67 (197)
T PHA02597          2 KPTILTDVDGVLLSWQS----GLPY-----FAQKYNIPTDHILKM---IQDERFRDP--GELFGCDQELAKKLIEKYNNS   67 (197)
T ss_pred             CcEEEEecCCceEchhh----ccHH-----HHHhcCCCHHHHHHH---HhHhhhcCH--HHHhcccHHHHHHHhhhhhHH
Confidence            69999999999999543    3333     446677764222111   111100000  01111000 011112212111


Q ss_pred             CCCCCCCCChhHHHHHHhhccCcE--EEecCChHHHHHHHhhcCCCc----ccceeeecccCCCCCCCCCCCCCCCCCCC
Q 029593           84 LPYDLIKPDPQLRNLLCSITQRKI--IFTNSDRNHAITCLKRLEIAD----CFDQIICFETMNPNLSKATRPDEFPVLLK  157 (191)
Q Consensus        84 ~~~~~~~~~~~~~~~l~~l~~~g~--i~t~~~~~~~~~~l~~~~l~~----~f~~i~~~~~~~~~~~~~~~~~~~~~~~k  157 (191)
                      .......++||+.++|+.|++.+.  ++||++.......++.+++..    +|+.+++++..                 |
T Consensus        68 ~~~~~~~~~pG~~e~L~~L~~~~~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i~~~~~~-----------------~  130 (197)
T PHA02597         68 DFIRYLSAYDDALDVINKLKEDYDFVAVTALGDSIDALLNRQFNLNALFPGAFSEVLMCGHD-----------------E  130 (197)
T ss_pred             HHHHhccCCCCHHHHHHHHHhcCCEEEEeCCccchhHHHHhhCCHHHhCCCcccEEEEeccC-----------------c
Confidence            112336789999999999988654  778877666665667777765    45566666542                 6


Q ss_pred             CCHHHHHHHHHHcCCCCCceEEecCcccc
Q 029593          158 PSMDAMKLALHVANVDPRHAVRQSSFLIF  186 (191)
Q Consensus       158 p~~~~~~~~~~~~~~~p~~~i~iGDs~~~  186 (191)
                      |+|+++..+++++|  |+++++|||+.+|
T Consensus       131 ~kp~~~~~a~~~~~--~~~~v~vgDs~~d  157 (197)
T PHA02597        131 SKEKLFIKAKEKYG--DRVVCFVDDLAHN  157 (197)
T ss_pred             ccHHHHHHHHHHhC--CCcEEEeCCCHHH
Confidence            77899999999999  8999999999987

2 hypothetical protein; Provisional

>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal

Probab=99.79  E-value=2.5e-18  Score=123.69  Aligned_cols=95  Identities=11%  Similarity=0.024  Sum_probs=73.6

Q ss_pred             CCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q 029593           89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKL  165 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~  165 (191)
                      ..++||+.++++.|+++|+   |+||+....++.+++.+|+..+|+..+..+..+..  .+.  ......+++++..++.
T Consensus        79 ~~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~~~~~~~~g~~--~p~--~~~~~~~~~k~~~~~~  154 (201)
T TIGR01491        79 ISLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSNELVFDEKGFI--QPD--GIVRVTFDNKGEAVER  154 (201)
T ss_pred             CCCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEEEEEEcCCCeE--ecc--eeeEEccccHHHHHHH
Confidence            5799999999999999987   99999999999999999998888776655433321  000  0000113455678999


Q ss_pred             HHHHcCCCCCceEEecCccccc
Q 029593          166 ALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       166 ~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      ++++++++|++|++||||.+|.
T Consensus       155 ~~~~~~~~~~~~i~iGDs~~D~  176 (201)
T TIGR01491       155 LKRELNPSLTETVAVGDSKNDL  176 (201)
T ss_pred             HHHHhCCCHHHEEEEcCCHhHH
Confidence            9999999999999999999885

This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.

>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]

Probab=99.77  E-value=2e-18  Score=124.04  Aligned_cols=164  Identities=16%  Similarity=0.135  Sum_probs=118.7

Q ss_pred             CCceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccHHHHHHcCCCCCccchhhhhhc
Q 029593            3 SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLRALGYDIGADDYHGFVHG   82 (191)
Q Consensus         3 ~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (191)
                      ..+.+++||+||||++++.....+++.     ++.++|.......................+.......+.+++....++
T Consensus         8 ~~~~~~lfD~dG~lvdte~~y~~~~~~-----~~~~ygk~~~~~~~~~~mG~~~~eaa~~~~~~~~dp~s~ee~~~e~~~   82 (222)
T KOG2914|consen    8 LKVSACLFDMDGTLVDTEDLYTEAWQE-----LLDRYGKPYPWDVKVKSMGKRTSEAARLFVKKLPDPVSREEFNKEEEE   82 (222)
T ss_pred             cceeeEEEecCCcEEecHHHHHHHHHH-----HHHHcCCCChHHHHHHHcCCCHHHHHHHHHhhcCCCCCHHHHHHHHHH
Confidence            368899999999999999988888887     566777644333222111111111111122233455666776665544


Q ss_pred             CCC--CCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcC-CCcccceeee--cccCCCCCCCCCCCCCCCC
Q 029593           83 RLP--YDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLE-IADCFDQIIC--FETMNPNLSKATRPDEFPV  154 (191)
Q Consensus        83 ~~~--~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~-l~~~f~~i~~--~~~~~~~~~~~~~~~~~~~  154 (191)
                      ...  .....+.||+.+++..|+.+|+   ++|++++...+.+.++++ +...|+.++.  ..++..             
T Consensus        83 ~~~~~~~~~~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~~~~~~~f~~~v~~d~~~v~~-------------  149 (222)
T KOG2914|consen   83 ILDRLFMNSILMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRHEDIFKNFSHVVLGDDPEVKN-------------  149 (222)
T ss_pred             HHHHhccccccCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHhhHHHHhcCCCeecCCccccC-------------
Confidence            321  2346788999999999999998   999999999999988886 7777888776  444444             


Q ss_pred             CCCCCHHHHHHHHHHcCCCC-CceEEecCccc
Q 029593          155 LLKPSMDAMKLALHVANVDP-RHAVRQSSFLI  185 (191)
Q Consensus       155 ~~kp~~~~~~~~~~~~~~~p-~~~i~iGDs~~  185 (191)
                       +||+|++|..+++.+|..| ++|++++|+++
T Consensus       150 -gKP~Pdi~l~A~~~l~~~~~~k~lVfeds~~  180 (222)
T KOG2914|consen  150 -GKPDPDIYLKAAKRLGVPPPSKCLVFEDSPV  180 (222)
T ss_pred             -CCCCchHHHHHHHhcCCCCccceEEECCCHH
Confidence             5999999999999999998 99999999975

>PLN02954 phosphoserine phosphatase

Probab=99.76  E-value=1.1e-17  Score=122.39  Aligned_cols=165  Identities=16%  Similarity=0.150  Sum_probs=96.6

Q ss_pred             CceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccHHHHHH-cC-CCCCccchhhhhh
Q 029593            4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLRA-LG-YDIGADDYHGFVH   81 (191)
Q Consensus         4 ~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~   81 (191)
                      .+|+|+|||||||++++..     ..     +.+.+|...... +....+....-.....+.. +. .....+.+...+.
T Consensus        11 ~~k~viFDfDGTL~~~~~~-----~~-----~~~~~g~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (224)
T PLN02954         11 SADAVCFDVDSTVCVDEGI-----DE-----LAEFCGAGEAVA-EWTAKAMGGSVPFEEALAARLSLFKPSLSQVEEFLE   79 (224)
T ss_pred             cCCEEEEeCCCcccchHHH-----HH-----HHHHcCChHHHH-HHHHHHHCCCCCHHHHHHHHHHHcCCCHHHHHHHHH
Confidence            5799999999999998542     22     445566542221 1111111110111111111 10 0112223333333


Q ss_pred             cCCCCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCC--cccceeeecccCCCCCCCCCCCCCCCCCC
Q 029593           82 GRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIA--DCFDQIICFETMNPNLSKATRPDEFPVLL  156 (191)
Q Consensus        82 ~~~~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~--~~f~~i~~~~~~~~~~~~~~~~~~~~~~~  156 (191)
                      .    ....++||+.++++.|+++|+   |+|++....++.+++.+|+.  .+|+..+..+..+.  ..+.........+
T Consensus        80 ~----~~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g~--~~g~~~~~~~~~~  153 (224)
T PLN02954         80 K----RPPRLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDSGE--YAGFDENEPTSRS  153 (224)
T ss_pred             H----ccCCCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCCCc--EECccCCCcccCC
Confidence            2    125689999999999999987   99999999999999999996  35543222111000  0000000111234


Q ss_pred             CCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          157 KPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       157 kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      +|||.+++.++++++.  ++|++||||.+|.
T Consensus       154 ~~K~~~i~~~~~~~~~--~~~i~iGDs~~Di  182 (224)
T PLN02954        154 GGKAEAVQHIKKKHGY--KTMVMIGDGATDL  182 (224)
T ss_pred             ccHHHHHHHHHHHcCC--CceEEEeCCHHHH
Confidence            7788999999998875  6999999999985

>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=99.75  E-value=6.8e-18  Score=121.77  Aligned_cols=84  Identities=23%  Similarity=0.249  Sum_probs=73.7

Q ss_pred             CCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHH
Q 029593           88 LIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMK  164 (191)
Q Consensus        88 ~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~  164 (191)
                      .++..+++.+++..||++|+   ++||.+.. .+..+..+++..+||.++.|...+..              ||+|.+|+
T Consensus       111 ~~~~~~~~~~~lq~lR~~g~~l~iisN~d~r-~~~~l~~~~l~~~fD~vv~S~e~g~~--------------KPDp~If~  175 (237)
T KOG3085|consen  111 AWKYLDGMQELLQKLRKKGTILGIISNFDDR-LRLLLLPLGLSAYFDFVVESCEVGLE--------------KPDPRIFQ  175 (237)
T ss_pred             CceeccHHHHHHHHHHhCCeEEEEecCCcHH-HHHHhhccCHHHhhhhhhhhhhhccC--------------CCChHHHH
Confidence            46777888899999999996   77776654 55888899999999999999988885              99999999


Q ss_pred             HHHHHcCCCCCceEEecCcccc
Q 029593          165 LALHVANVDPRHAVRQSSFLIF  186 (191)
Q Consensus       165 ~~~~~~~~~p~~~i~iGDs~~~  186 (191)
                      .+++.+++.|++|++|||++..
T Consensus       176 ~al~~l~v~Pee~vhIgD~l~n  197 (237)
T KOG3085|consen  176 LALERLGVKPEECVHIGDLLEN  197 (237)
T ss_pred             HHHHHhCCChHHeEEecCcccc
Confidence            9999999999999999998753

>PRK11133 serB phosphoserine phosphatase; Provisional

Probab=99.75  E-value=1.2e-17  Score=127.37  Aligned_cols=88  Identities=10%  Similarity=-0.033  Sum_probs=71.3

Q ss_pred             CCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccce-------eeecccCCCCCCCCCCCCCCCCCCCC
Q 029593           89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQ-------IICFETMNPNLSKATRPDEFPVLLKP  158 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~-------i~~~~~~~~~~~~~~~~~~~~~~~kp  158 (191)
                      +++.||++++++.|+++|+   |+|++.....+...+++++...+..       .+++...+           ..+.+||
T Consensus       180 l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg~ltg~v~g-----------~iv~~k~  248 (322)
T PRK11133        180 LPLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDGKLTGNVLG-----------DIVDAQY  248 (322)
T ss_pred             CCCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECCEEEeEecC-----------ccCCccc
Confidence            6899999999999999997   9999998888888899988664432       12222111           1234589


Q ss_pred             CHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          159 SMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       159 ~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      |+..++.+++++|++|++|++|||+.||.
T Consensus       249 K~~~L~~la~~lgi~~~qtIaVGDg~NDl  277 (322)
T PRK11133        249 KADTLTRLAQEYEIPLAQTVAIGDGANDL  277 (322)
T ss_pred             HHHHHHHHHHHcCCChhhEEEEECCHHHH
Confidence            99999999999999999999999999984

>PLN02811 hydrolase

Probab=99.75  E-value=4.3e-18  Score=124.22  Aligned_cols=152  Identities=16%  Similarity=0.147  Sum_probs=101.8

Q ss_pred             cCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccHH----HH-HHcCCC--CCccchhhhhhcCC
Q 029593           12 LDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLA----GL-RALGYD--IGADDYHGFVHGRL   84 (191)
Q Consensus        12 ~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~--~~~~~~~~~~~~~~   84 (191)
                      |||||+|+...+..+|.+     +.+.+|.+... ..    .....|....    .+ ...+.+  ...+.+........
T Consensus         1 ~DGTL~Ds~~~~~~a~~~-----~~~~~g~~~~~-~~----~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   70 (220)
T PLN02811          1 MDGLLLDTEKFYTEVQEK-----ILARYGKTFDW-SL----KAKMMGKKAIEAARIFVEESGLSDSLSPEDFLVEREAML   70 (220)
T ss_pred             CCCcceecHHHHHHHHHH-----HHHHcCCCCCH-HH----HHHccCCCHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHH
Confidence            799999999988888887     44666665321 11    1122233221    11 111221  11222222111110


Q ss_pred             --CCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHH-HHhhcCCCcccceeeecc--cCCCCCCCCCCCCCCCCCC
Q 029593           85 --PYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAIT-CLKRLEIADCFDQIICFE--TMNPNLSKATRPDEFPVLL  156 (191)
Q Consensus        85 --~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~-~l~~~~l~~~f~~i~~~~--~~~~~~~~~~~~~~~~~~~  156 (191)
                        ......++||+.++|+.|+++|+   |+||+....... ..+..++..+|+.+++++  +.+.              +
T Consensus        71 ~~~~~~~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f~~i~~~~~~~~~~--------------~  136 (220)
T PLN02811         71 QDLFPTSDLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLMHHVVTGDDPEVKQ--------------G  136 (220)
T ss_pred             HHHHhhCCCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhCCEEEECChhhccC--------------C
Confidence              01246789999999999999987   999988765544 344457888999999988  6655              4


Q ss_pred             CCCHHHHHHHHHHcC---CCCCceEEecCccccc
Q 029593          157 KPSMDAMKLALHVAN---VDPRHAVRQSSFLIFY  187 (191)
Q Consensus       157 kp~~~~~~~~~~~~~---~~p~~~i~iGDs~~~~  187 (191)
                      ||+|++|..++++++   ++|++|++|||+..|.
T Consensus       137 KP~p~~~~~a~~~~~~~~~~~~~~v~IgDs~~di  170 (220)
T PLN02811        137 KPAPDIFLAAARRFEDGPVDPGKVLVFEDAPSGV  170 (220)
T ss_pred             CCCcHHHHHHHHHhCCCCCCccceEEEeccHhhH
Confidence            999999999999997   9999999999999874

>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed

Probab=99.74  E-value=2.2e-17  Score=120.40  Aligned_cols=150  Identities=11%  Similarity=0.041  Sum_probs=91.9

Q ss_pred             eEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcc---cHHHHHHcCCCCCccchhhhhhc
Q 029593            6 NCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGS---TLAGLRALGYDIGADDYHGFVHG   82 (191)
Q Consensus         6 k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~   82 (191)
                      ++|+|||||||++++..+. ..         +.++-  ..+.+....+......   .......+......+++.+.+..
T Consensus         4 ~~vifDfDgTi~~~d~~~~-~~---------~~~~~--~~~~~i~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~   71 (219)
T PRK09552          4 IQIFCDFDGTITNNDNIIA-IM---------KKFAP--PEWEELKDDILSQELSIQEGVGQMFQLLPSNLKEEIIQFLLE   71 (219)
T ss_pred             cEEEEcCCCCCCcchhhHH-HH---------HHhCH--HHHHHHHHHHHhCCcCHHHHHHHHHHhCCCCchHHHHHHHHh
Confidence            5999999999999986542 11         22221  2223322222222111   11111121111112333333332


Q ss_pred             CCCCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCc--cc--ceeeecccCCCCCCCCCCCCCCCCC
Q 029593           83 RLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIAD--CF--DQIICFETMNPNLSKATRPDEFPVL  155 (191)
Q Consensus        83 ~~~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~--~f--~~i~~~~~~~~~~~~~~~~~~~~~~  155 (191)
                           ...++||+.++++.|+++|+   |+|++....++.+++.+ +..  .+  +..++++....              
T Consensus        72 -----~~~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~--------------  131 (219)
T PRK09552         72 -----TAEIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITI--------------  131 (219)
T ss_pred             -----CCCcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEE--------------
Confidence                 26899999999999999987   99999999999999987 643  22  22333333222              


Q ss_pred             CCCCHHH----------HHHHHHHcCCCCCceEEecCccccc
Q 029593          156 LKPSMDA----------MKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       156 ~kp~~~~----------~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      .||.|..          ...++++++.++++|++||||.+|.
T Consensus       132 ~kp~p~~~~~~~~~~~~K~~~l~~~~~~~~~~i~iGDs~~Di  173 (219)
T PRK09552        132 TWPHPCDEHCQNHCGCCKPSLIRKLSDTNDFHIVIGDSITDL  173 (219)
T ss_pred             eccCCccccccccCCCchHHHHHHhccCCCCEEEEeCCHHHH
Confidence            3665543          3468888999999999999999985

>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase

Probab=99.72  E-value=1.3e-16  Score=113.45  Aligned_cols=96  Identities=10%  Similarity=-0.024  Sum_probs=71.8

Q ss_pred             CCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCC--CCCCCCC----CCCCCCCCC
Q 029593           89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNL--SKATRPD----EFPVLLKPS  159 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~--~~~~~~~----~~~~~~kp~  159 (191)
                      .++.|++.++++.|+++|+   ++||+....++..++.+++..+|+.+++.+......  .......    .....+.+|
T Consensus        71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~K  150 (188)
T TIGR01489        71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIEIYSNPASFDNDGRHIVWPHHCHGCCSCPCGCCK  150 (188)
T ss_pred             CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhheeEEeccCceECCCCcEEEecCCCCccCcCCCCCCH
Confidence            6889999999999999886   999999999999999999999999988765422110  0000000    112234556


Q ss_pred             HHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          160 MDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       160 ~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      +..++.++++.   |+++++||||.+|.
T Consensus       151 ~~~~~~~~~~~---~~~~i~iGD~~~D~  175 (188)
T TIGR01489       151 GKVIHKLSEPK---YQHIIYIGDGVTDV  175 (188)
T ss_pred             HHHHHHHHhhc---CceEEEECCCcchh
Confidence            88888887765   89999999999995

Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.

>PRK13582 thrH phosphoserine phosphatase; Provisional

Probab=99.71  E-value=5.8e-17  Score=117.01  Aligned_cols=153  Identities=15%  Similarity=0.141  Sum_probs=92.4

Q ss_pred             ceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHH-HHHHHHhcccHHHHHHcCCCCCccchhhhhhcC
Q 029593            5 FNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLR-VELFKAYGSTLAGLRALGYDIGADDYHGFVHGR   83 (191)
Q Consensus         5 ~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (191)
                      +++|+|||||||++.      .|..     +.+..|.+........ ..+....+.....+..  ...+.+.+...... 
T Consensus         1 ~~~v~FD~DGTL~~~------~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~i~~~~~~-   66 (205)
T PRK13582          1 MEIVCLDLEGVLVPE------IWIA-----FAEKTGIPELRATTRDIPDYDVLMKQRLDILDE--HGLGLADIQEVIAT-   66 (205)
T ss_pred             CeEEEEeCCCCChhh------HHHH-----HHHHcCChHHHHHhcCCCCHHHHHHHHHHHHHH--cCCCHHHHHHHHHh-
Confidence            379999999999932      2332     3456666532110000 0011111111112221  12344445444443 


Q ss_pred             CCCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCH
Q 029593           84 LPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSM  160 (191)
Q Consensus        84 ~~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~  160 (191)
                           .+++||+.+++..|+++ +   ++||+....++..++.+++..+|+..+.....+..  .+        ..+|.|
T Consensus        67 -----~~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~i--~~--------~~~~~p  130 (205)
T PRK13582         67 -----LDPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDEDGMI--TG--------YDLRQP  130 (205)
T ss_pred             -----CCCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECCCCeE--EC--------cccccc
Confidence                 67899999999999988 5   99999999999999999998888765543321110  00        002233


Q ss_pred             HHHHHHHHHcCCCCCceEEecCccccc
Q 029593          161 DAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       161 ~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      .....+++.++..+++|++||||.+|.
T Consensus       131 ~~k~~~l~~~~~~~~~~v~iGDs~~D~  157 (205)
T PRK13582        131 DGKRQAVKALKSLGYRVIAAGDSYNDT  157 (205)
T ss_pred             chHHHHHHHHHHhCCeEEEEeCCHHHH
Confidence            344566666677789999999999985

>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC

Probab=99.69  E-value=9.7e-17  Score=107.23  Aligned_cols=80  Identities=16%  Similarity=0.122  Sum_probs=71.0

Q ss_pred             CCChhHHHHHHhhccCcE---EEecC-ChHHHHHHHhhcC-------CCcccceeeecccCCCCCCCCCCCCCCCCCCCC
Q 029593           90 KPDPQLRNLLCSITQRKI---IFTNS-DRNHAITCLKRLE-------IADCFDQIICFETMNPNLSKATRPDEFPVLLKP  158 (191)
Q Consensus        90 ~~~~~~~~~l~~l~~~g~---i~t~~-~~~~~~~~l~~~~-------l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp  158 (191)
                      +++||+.++|+.|+++|+   ++||+ ....+...++..+       +..+|+.+++++.                  +|
T Consensus        29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~~~~i~~l~~~f~~~~~~~~------------------~p   90 (128)
T TIGR01681        29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFEDFGIIFPLAEYFDPLTIGYW------------------LP   90 (128)
T ss_pred             HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhccccccchhhHhhhhhhhhcCC------------------Cc
Confidence            688999999999999998   99999 7888888889888       7888988888752                  78


Q ss_pred             CHHHHHHHHHHcC--CCCCceEEecCccccc
Q 029593          159 SMDAMKLALHVAN--VDPRHAVRQSSFLIFY  187 (191)
Q Consensus       159 ~~~~~~~~~~~~~--~~p~~~i~iGDs~~~~  187 (191)
                      +|..+..+++++|  ++|++|++|||++.+-
T Consensus        91 kp~~~~~a~~~lg~~~~p~~~l~igDs~~n~  121 (128)
T TIGR01681        91 KSPRLVEIALKLNGVLKPKSILFVDDRPDNN  121 (128)
T ss_pred             HHHHHHHHHHHhcCCCCcceEEEECCCHhHH
Confidence            8899999999999  9999999999998763

No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.

>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like

Probab=99.69  E-value=4.7e-16  Score=109.65  Aligned_cols=97  Identities=13%  Similarity=0.118  Sum_probs=73.3

Q ss_pred             CCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q 029593           89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKL  165 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~  165 (191)
                      +.+.|++.++++.++++|+   |+|++....++.+++.+|+...+...+..+..+.  .++.........+..|+..++.
T Consensus        72 ~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~~~~~~~~g~--~~g~~~~~~~~~~~~K~~~l~~  149 (177)
T TIGR01488        72 VALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFANRLEFDDNGL--LTGPIEGQVNPEGECKGKVLKE  149 (177)
T ss_pred             CCcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheeeeEEECCCCE--EeCccCCcccCCcchHHHHHHH
Confidence            5688999999999999987   9999999999999999999877766554432111  1110000112334667889999


Q ss_pred             HHHHcCCCCCceEEecCccccc
Q 029593          166 ALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       166 ~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      ++++++++++++++||||.+|.
T Consensus       150 ~~~~~~~~~~~~~~iGDs~~D~  171 (177)
T TIGR01488       150 LLEESKITLKKIIAVGDSVNDL  171 (177)
T ss_pred             HHHHhCCCHHHEEEEeCCHHHH
Confidence            9999999999999999999985

Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.

>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain

Probab=99.68  E-value=7.9e-17  Score=110.35  Aligned_cols=85  Identities=16%  Similarity=0.079  Sum_probs=65.5

Q ss_pred             CCCChhHHHHHHhhccCcE---EEecCCh---------------HHHHHHHhhcCCCcc--cceee-ecccCCCCCCCCC
Q 029593           89 IKPDPQLRNLLCSITQRKI---IFTNSDR---------------NHAITCLKRLEIADC--FDQII-CFETMNPNLSKAT  147 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~---------------~~~~~~l~~~~l~~~--f~~i~-~~~~~~~~~~~~~  147 (191)
                      +.++||+.++++.|+++|+   ++||++.               ..+...++++++...  +.... +++..+.      
T Consensus        26 ~~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~------   99 (147)
T TIGR01656        26 WQLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDGVLFCPHHPADNCSC------   99 (147)
T ss_pred             eEEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeEEEECCCCCCCCCCC------
Confidence            4688999999999999987   8999873               456677888888521  11111 1233332      


Q ss_pred             CCCCCCCCCCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          148 RPDEFPVLLKPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       148 ~~~~~~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                              .||+|.+++.++++++++|++|++|||+..|.
T Consensus       100 --------~KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di  131 (147)
T TIGR01656       100 --------RKPKPGLILEALKRLGVDASRSLVVGDRLRDL  131 (147)
T ss_pred             --------CCCCHHHHHHHHHHcCCChHHEEEEcCCHHHH
Confidence                    49999999999999999999999999998764

This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.

>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase

Probab=99.67  E-value=8.8e-16  Score=111.30  Aligned_cols=83  Identities=11%  Similarity=0.065  Sum_probs=70.8

Q ss_pred             CCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhc---CCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHH
Q 029593           88 LIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRL---EIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMD  161 (191)
Q Consensus        88 ~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~---~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~  161 (191)
                      ...++||+.++|+.|+++|+   |+||++...++..+++.   ++..+|+.++... .+               .||+|+
T Consensus        93 ~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~f~~~fd~~-~g---------------~KP~p~  156 (220)
T TIGR01691        93 TSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPYFSGYFDTT-VG---------------LKTEAQ  156 (220)
T ss_pred             ccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhhcceEEEeC-cc---------------cCCCHH
Confidence            35799999999999999987   99999998888888775   5667777776532 23               399999


Q ss_pred             HHHHHHHHcCCCCCceEEecCcccc
Q 029593          162 AMKLALHVANVDPRHAVRQSSFLIF  186 (191)
Q Consensus       162 ~~~~~~~~~~~~p~~~i~iGDs~~~  186 (191)
                      .|..+++++|++|++|++|||+..|
T Consensus       157 ~y~~i~~~lgv~p~e~lfVgDs~~D  181 (220)
T TIGR01691       157 SYVKIAGQLGSPPREILFLSDIINE  181 (220)
T ss_pred             HHHHHHHHhCcChhHEEEEeCCHHH
Confidence            9999999999999999999999865

This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.

>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated

Probab=99.67  E-value=3.3e-16  Score=110.98  Aligned_cols=88  Identities=15%  Similarity=-0.019  Sum_probs=66.3

Q ss_pred             CCCChhHHHHHHhhccCcE---EEecCCh---------------HHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCC
Q 029593           89 IKPDPQLRNLLCSITQRKI---IFTNSDR---------------NHAITCLKRLEIADCFDQIICFETMNPNLSKATRPD  150 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~---------------~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~  150 (191)
                      +.++||+.++|..|+++|+   |+||++.               +.+...++.+++  .|+.++.+.....         
T Consensus        28 ~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~--~f~~i~~~~~~~~---------   96 (181)
T PRK08942         28 WIPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGG--RLDGIYYCPHHPE---------   96 (181)
T ss_pred             eEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCC--ccceEEECCCCCC---------
Confidence            5789999999999999987   9998763               334455666666  4677665432110         


Q ss_pred             CCCCCCCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          151 EFPVLLKPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       151 ~~~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      +.....||+|.++..+++.++++|++|++|||+.+|.
T Consensus        97 ~~~~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di  133 (181)
T PRK08942         97 DGCDCRKPKPGMLLSIAERLNIDLAGSPMVGDSLRDL  133 (181)
T ss_pred             CCCcCCCCCHHHHHHHHHHcCCChhhEEEEeCCHHHH
Confidence            0111259999999999999999999999999999874

>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]

Probab=99.65  E-value=2.6e-15  Score=108.41  Aligned_cols=166  Identities=13%  Similarity=0.047  Sum_probs=105.5

Q ss_pred             CCCceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHh---cccHHHHHHcCCCCCccchhh
Q 029593            2 DSPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAY---GSTLAGLRALGYDIGADDYHG   78 (191)
Q Consensus         2 ~~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~   78 (191)
                      .++.++++|||||||++.+     .+..     +.+..|....- ...........   .........+....+.+....
T Consensus         2 ~~~~~L~vFD~D~TLi~~~-----~~~~-----~~~~~g~~~~v-~~~t~~~~~~~~~~~~~~~~~v~~l~g~~~~~v~~   70 (212)
T COG0560           2 RRMKKLAVFDLDGTLINAE-----LIDE-----LARGAGVGEEV-LAITERAMRGELDFEESLRLRVALLKGLPVEVLEE   70 (212)
T ss_pred             CCccceEEEecccchhhHH-----HHHH-----HHHHhCCHHHH-HHHHHHHhcccccHHHHHHHHHHHhCCCCHHHHHH
Confidence            4467899999999999821     2221     33444443221 11111111111   111111112222333344444


Q ss_pred             hhhcCCCCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCC
Q 029593           79 FVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVL  155 (191)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~  155 (191)
                      ...+.     +.+.|++.+++..++++|.   |+|++....++.+.+.+|++..+......++ +.  +++. .....+.
T Consensus        71 ~~~~~-----~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~d-G~--ltG~-v~g~~~~  141 (212)
T COG0560          71 VREEF-----LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDD-GK--LTGR-VVGPICD  141 (212)
T ss_pred             HHHhc-----CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeC-CE--Eece-eeeeecC
Confidence            44432     6899999999999999997   9999999999999999999887776655554 21  1111 1112334


Q ss_pred             CCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          156 LKPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       156 ~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      ++-|...++.+++++|+++++++++|||.||.
T Consensus       142 ~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDl  173 (212)
T COG0560         142 GEGKAKALRELAAELGIPLEETVAYGDSANDL  173 (212)
T ss_pred             cchHHHHHHHHHHHcCCCHHHeEEEcCchhhH
Confidence            45678999999999999999999999999984

>TIGR01685 MDP-1 magnesium-dependent phosphatase-1

Probab=99.64  E-value=3.1e-16  Score=109.33  Aligned_cols=86  Identities=15%  Similarity=0.058  Sum_probs=74.5

Q ss_pred             CCCCChhHHHHHHhhccCcE---EEecC-ChHHHHHHHhhcCCC---------cccceeeecccCCCCCCCCCCCCCCCC
Q 029593           88 LIKPDPQLRNLLCSITQRKI---IFTNS-DRNHAITCLKRLEIA---------DCFDQIICFETMNPNLSKATRPDEFPV  154 (191)
Q Consensus        88 ~~~~~~~~~~~l~~l~~~g~---i~t~~-~~~~~~~~l~~~~l~---------~~f~~i~~~~~~~~~~~~~~~~~~~~~  154 (191)
                      ...++||+.++++.|+++|+   ++||+ ....++..++.+++.         .+|+.+++++....             
T Consensus        43 ~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~~~~~~~Fd~iv~~~~~~~-------------  109 (174)
T TIGR01685        43 EVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKTVPMHSLFDDRIEIYKPNK-------------  109 (174)
T ss_pred             EEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCcccHHHhceeeeeccCCch-------------
Confidence            36889999999999999986   99988 788889999999998         99999999886544             


Q ss_pred             CCCCCHHHHHHHHHHc--CCCCCceEEecCccccc
Q 029593          155 LLKPSMDAMKLALHVA--NVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       155 ~~kp~~~~~~~~~~~~--~~~p~~~i~iGDs~~~~  187 (191)
                       .||.+.+++.+.+.+  +++|++|++|||++.|.
T Consensus       110 -~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di  143 (174)
T TIGR01685       110 -AKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNV  143 (174)
T ss_pred             -HHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhH
Confidence             377777888887777  89999999999999874

This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.

>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein

Probab=99.64  E-value=2.1e-15  Score=108.36  Aligned_cols=154  Identities=11%  Similarity=0.097  Sum_probs=89.0

Q ss_pred             eEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccHHHHHHcCCCCCccchhhhhhcCCC
Q 029593            6 NCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLRALGYDIGADDYHGFVHGRLP   85 (191)
Q Consensus         6 k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (191)
                      .+++|||||||++.      .|..     +....|.............+..+......+... ...+.+.+...+..   
T Consensus         2 ~la~FDlD~TLi~~------~w~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~r~~ll~~-~g~~~~~i~~~~~~---   66 (203)
T TIGR02137         2 EIACLDLEGVLVPE------IWIA-----FAEKTGIDALKATTRDIPDYDVLMKQRLRILDE-HGLKLGDIQEVIAT---   66 (203)
T ss_pred             eEEEEeCCcccHHH------HHHH-----HHHHcCCcHHHHHhcCCcCHHHHHHHHHHHHHH-CCCCHHHHHHHHHh---
Confidence            56999999999954      2333     445666543221110001111111111111111 14445555555443   


Q ss_pred             CCCCCCChhHHHHHHhhccCcE--EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHH
Q 029593           86 YDLIKPDPQLRNLLCSITQRKI--IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAM  163 (191)
Q Consensus        86 ~~~~~~~~~~~~~l~~l~~~g~--i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~  163 (191)
                         +.++||+.++++.+++++.  |+|++....++.+++.+|+..+|......++.+.  .++.     ....+|.+...
T Consensus        67 ---i~l~pga~ell~~lk~~~~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g~--~tG~-----~~~~~~~K~~~  136 (203)
T TIGR02137        67 ---LKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDR--VVGY-----QLRQKDPKRQS  136 (203)
T ss_pred             ---CCCCccHHHHHHHHHhCCeEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCCe--eECe-----eecCcchHHHH
Confidence               6899999999999998754  9999999999999999999877763222111000  0000     00124444444


Q ss_pred             HHHHHHcCCCCCceEEecCccccc
Q 029593          164 KLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       164 ~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      ...+++.+.   ++++||||.||.
T Consensus       137 l~~l~~~~~---~~v~vGDs~nDl  157 (203)
T TIGR02137       137 VIAFKSLYY---RVIAAGDSYNDT  157 (203)
T ss_pred             HHHHHhhCC---CEEEEeCCHHHH
Confidence            444455553   899999999984

This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).

>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA

Probab=99.64  E-value=1e-15  Score=102.97  Aligned_cols=81  Identities=20%  Similarity=0.215  Sum_probs=66.9

Q ss_pred             CCCChhHHHHHHhhccCcE---EEecCC--------hHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCC
Q 029593           89 IKPDPQLRNLLCSITQRKI---IFTNSD--------RNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLK  157 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~---i~t~~~--------~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~k  157 (191)
                      ..++|++.+++..|+++|+   ++||+.        ...+...++++++.  ++.++.+.  ..              .|
T Consensus        24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~--~~~~~~~~--~~--------------~K   85 (132)
T TIGR01662        24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVP--IDVLYACP--HC--------------RK   85 (132)
T ss_pred             heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCC--EEEEEECC--CC--------------CC
Confidence            4688999999999999987   999998        77888899999885  33333332  22              49


Q ss_pred             CCHHHHHHHHHHc-CCCCCceEEecC-ccccc
Q 029593          158 PSMDAMKLALHVA-NVDPRHAVRQSS-FLIFY  187 (191)
Q Consensus       158 p~~~~~~~~~~~~-~~~p~~~i~iGD-s~~~~  187 (191)
                      |+|+++..+++++ +++|+++++||| +.+|.
T Consensus        86 P~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di  117 (132)
T TIGR01662        86 PKPGMFLEALKRFNEIDPEESVYVGDQDLTDL  117 (132)
T ss_pred             CChHHHHHHHHHcCCCChhheEEEcCCCcccH
Confidence            9999999999999 599999999999 67764

In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.

>cd01427 HAD_like Haloacid dehalogenase-like hydrolases

Probab=99.63  E-value=8.9e-16  Score=103.23  Aligned_cols=98  Identities=22%  Similarity=0.259  Sum_probs=77.2

Q ss_pred             CCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCC--CCCCCCCCCCCCCCHHHH
Q 029593           89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSK--ATRPDEFPVLLKPSMDAM  163 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~--~~~~~~~~~~~kp~~~~~  163 (191)
                      ..+++++.++++.|+++|+   ++|++....++.+++++++...++.+++.+........  ...-......+||++..+
T Consensus        23 ~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  102 (139)
T cd01427          23 LELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNPDKL  102 (139)
T ss_pred             CCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhhheeccchhhhhcccccccccccccccCCCCHHHH
Confidence            7899999999999999876   99999999999999999998888888876654321000  000001122239999999


Q ss_pred             HHHHHHcCCCCCceEEecCcccc
Q 029593          164 KLALHVANVDPRHAVRQSSFLIF  186 (191)
Q Consensus       164 ~~~~~~~~~~p~~~i~iGDs~~~  186 (191)
                      ..++++++..++++++|||+.+|
T Consensus       103 ~~~~~~~~~~~~~~~~igD~~~d  125 (139)
T cd01427         103 LAALKLLGVDPEEVLMVGDSLND  125 (139)
T ss_pred             HHHHHHcCCChhhEEEeCCCHHH
Confidence            99999999999999999999987

The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.

>PRK06769 hypothetical protein; Validated

Probab=99.63  E-value=1.1e-15  Score=107.33  Aligned_cols=85  Identities=16%  Similarity=0.049  Sum_probs=65.4

Q ss_pred             CCCChhHHHHHHhhccCcE---EEecCChH--------HHHHHHhhcCCCcccceee-ecccCCCCCCCCCCCCCCCCCC
Q 029593           89 IKPDPQLRNLLCSITQRKI---IFTNSDRN--------HAITCLKRLEIADCFDQII-CFETMNPNLSKATRPDEFPVLL  156 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~--------~~~~~l~~~~l~~~f~~i~-~~~~~~~~~~~~~~~~~~~~~~  156 (191)
                      +.++||+.++|+.|+++|+   ++||++..        .....++.+|+..+|.... +++..+.              .
T Consensus        27 ~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~--------------~   92 (173)
T PRK06769         27 FTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDIYLCPHKHGDGCEC--------------R   92 (173)
T ss_pred             eEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEEEECcCCCCCCCCC--------------C
Confidence            5689999999999999987   99987641        2333466777765544333 3343333              4


Q ss_pred             CCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          157 KPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       157 kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      ||+|.++..++++++++|++|++|||+++|.
T Consensus        93 KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di  123 (173)
T PRK06769         93 KPSTGMLLQAAEKHGLDLTQCAVIGDRWTDI  123 (173)
T ss_pred             CCCHHHHHHHHHHcCCCHHHeEEEcCCHHHH
Confidence            9999999999999999999999999999874

>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase

Probab=99.62  E-value=3.7e-15  Score=108.33  Aligned_cols=85  Identities=8%  Similarity=-0.030  Sum_probs=62.4

Q ss_pred             CCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCccc---ceeeecccCCCCCCCCCCCCCCCCCCCCCHHH
Q 029593           89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCF---DQIICFETMNPNLSKATRPDEFPVLLKPSMDA  162 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f---~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~  162 (191)
                      .+++||+.++++.|+++|+   |+|++....++.+++.++....+   +.++.++....              .||+|..
T Consensus        69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~--------------~~p~~~~  134 (214)
T TIGR03333        69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHI--------------DWPHPCD  134 (214)
T ss_pred             CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEE--------------eCCCCCc
Confidence            6899999999999999987   99999999999999887443332   22333322221              3565544


Q ss_pred             H----------HHHHHHcCCCCCceEEecCccccc
Q 029593          163 M----------KLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       163 ~----------~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      +          ..++++++..++++++||||.+|+
T Consensus       135 ~~~~~~cg~~K~~~l~~~~~~~~~~i~iGDg~~D~  169 (214)
T TIGR03333       135 GTCQNQCGCCKPSLIRKLSEPNDYHIVIGDSVTDV  169 (214)
T ss_pred             cccccCCCCCHHHHHHHHhhcCCcEEEEeCCHHHH
Confidence            3          466677777899999999999985

Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.

>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672

Probab=99.60  E-value=1e-14  Score=106.65  Aligned_cols=78  Identities=13%  Similarity=0.009  Sum_probs=64.0

Q ss_pred             CCCChhHHHHHHhhccCcE---EEecC----ChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHH
Q 029593           89 IKPDPQLRNLLCSITQRKI---IFTNS----DRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMD  161 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~---i~t~~----~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~  161 (191)
                      ..+.+++.++|+.++++|+   ++||.    ....++..++.+|+..+|+.+++++....              +||++.
T Consensus       113 s~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f~~i~~~d~~~~--------------~Kp~~~  178 (237)
T TIGR01672       113 SIPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMNPVIFAGDKPGQ--------------YQYTKT  178 (237)
T ss_pred             CcchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchheeEEECCCCCCC--------------CCCCHH
Confidence            4677789999999999987   99998    55678888899999999999999877654              377764


Q ss_pred             HHHHHHHHcCCCCCceEEecCccccc
Q 029593          162 AMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       162 ~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                         .+++++++    +++|||+.+|+
T Consensus       179 ---~~l~~~~i----~i~vGDs~~DI  197 (237)
T TIGR01672       179 ---QWIQDKNI----RIHYGDSDNDI  197 (237)
T ss_pred             ---HHHHhCCC----eEEEeCCHHHH
Confidence               35566676    79999999996

Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.

>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase

Probab=99.60  E-value=2.8e-15  Score=105.71  Aligned_cols=93  Identities=12%  Similarity=0.005  Sum_probs=65.6

Q ss_pred             CCCChhHHHHHHhhccCcE---EEecCCh---------------HHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCC
Q 029593           89 IKPDPQLRNLLCSITQRKI---IFTNSDR---------------NHAITCLKRLEIADCFDQIICFETMNPNLSKATRPD  150 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~---------------~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~  150 (191)
                      +.++||+.++|..|+++|+   |+||++.               ......++..++.  |+.++.+......   .....
T Consensus        25 ~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~i~~~~~~~~~---~~~~~   99 (176)
T TIGR00213        25 FEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVD--LDGIYYCPHHPEG---VEEFR   99 (176)
T ss_pred             eEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCC--ccEEEECCCCCcc---ccccc
Confidence            5788999999999999987   9999874               2334455555554  6665543221100   00000


Q ss_pred             CCCCCCCCCHHHHHHHHHHcCCCCCceEEecCcccc
Q 029593          151 EFPVLLKPSMDAMKLALHVANVDPRHAVRQSSFLIF  186 (191)
Q Consensus       151 ~~~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~  186 (191)
                      ......||+|.++..++++++++|++|+||||+..|
T Consensus       100 ~~~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~D  135 (176)
T TIGR00213       100 QVCDCRKPKPGMLLQARKELHIDMAQSYMVGDKLED  135 (176)
T ss_pred             CCCCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHH
Confidence            112236999999999999999999999999999876

This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).

>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490

Probab=99.60  E-value=1.6e-14  Score=104.01  Aligned_cols=95  Identities=12%  Similarity=0.009  Sum_probs=72.3

Q ss_pred             CCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeec-ccCCCCCCCCCCCCCCCCCCCCCHHHHH
Q 029593           89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICF-ETMNPNLSKATRPDEFPVLLKPSMDAMK  164 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~-~~~~~~~~~~~~~~~~~~~~kp~~~~~~  164 (191)
                      ..++|++.++++.++++|.   |+|++....++.+++++|+..+|...+.. ++ +  .+++.. ..+...+++|...++
T Consensus        86 ~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~-g--~~~g~~-~~~~~~g~~K~~~l~  161 (202)
T TIGR01490        86 SILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESED-G--IYTGNI-DGNNCKGEGKVHALA  161 (202)
T ss_pred             HhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCC-C--EEeCCc-cCCCCCChHHHHHHH
Confidence            4689999999999999886   99999999999999999998776652221 11 0  011111 112234677888999


Q ss_pred             HHHHHcCCCCCceEEecCccccc
Q 029593          165 LALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       165 ~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      .++++.++++++|+++|||.+|.
T Consensus       162 ~~~~~~~~~~~~~~~~gDs~~D~  184 (202)
T TIGR01490       162 ELLAEEQIDLKDSYAYGDSISDL  184 (202)
T ss_pred             HHHHHcCCCHHHcEeeeCCcccH
Confidence            99999999999999999999984

A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.

>TIGR01261 hisB_Nterm histidinol-phosphatase

Probab=99.59  E-value=2.6e-15  Score=103.94  Aligned_cols=83  Identities=16%  Similarity=0.229  Sum_probs=68.9

Q ss_pred             CCCChhHHHHHHhhccCcE---EEecCC---------------hHHHHHHHhhcCCCcccceee-e----cccCCCCCCC
Q 029593           89 IKPDPQLRNLLCSITQRKI---IFTNSD---------------RNHAITCLKRLEIADCFDQII-C----FETMNPNLSK  145 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~---i~t~~~---------------~~~~~~~l~~~~l~~~f~~i~-~----~~~~~~~~~~  145 (191)
                      +.++||+.++|+.|+++|+   ++||.+               ...+...++.+|+.  |+.++ +    +++...    
T Consensus        28 ~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~--fd~ii~~~~~~~~~~~~----  101 (161)
T TIGR01261        28 LRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGII--FDDVLICPHFPDDNCDC----  101 (161)
T ss_pred             eeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCc--eeEEEECCCCCCCCCCC----
Confidence            6889999999999999987   999963               44677788999996  76554 4    344443    


Q ss_pred             CCCCCCCCCCCCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          146 ATRPDEFPVLLKPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       146 ~~~~~~~~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                                .||++.++..++++++++|++|++|||+.+|.
T Consensus       102 ----------~KP~~~~~~~~~~~~~~~~~e~l~IGD~~~Di  133 (161)
T TIGR01261       102 ----------RKPKIKLLEPYLKKNLIDKARSYVIGDRETDM  133 (161)
T ss_pred             ----------CCCCHHHHHHHHHHcCCCHHHeEEEeCCHHHH
Confidence                      49999999999999999999999999998763

This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.

>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase)

Probab=99.58  E-value=1.2e-15  Score=110.58  Aligned_cols=78  Identities=21%  Similarity=0.227  Sum_probs=67.7

Q ss_pred             CCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCc--ccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHH
Q 029593           89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIAD--CFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAM  163 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~--~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~  163 (191)
                      .++.|++.+++..|+++|+   ++|+.+...+..+.+.+|+..  .|....       .              ||.+.++
T Consensus       126 d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~~~v~a~~~-------~--------------kP~~k~~  184 (215)
T PF00702_consen  126 DPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFDSIVFARVI-------G--------------KPEPKIF  184 (215)
T ss_dssp             EEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCSEEEEESHE-------T--------------TTHHHHH
T ss_pred             CcchhhhhhhhhhhhccCcceeeeecccccccccccccccccccccccccc-------c--------------cccchhH
Confidence            4788999999999999997   999888999999999999943  222222       1              9999999


Q ss_pred             HHHHHHcCCCCCceEEecCccccc
Q 029593          164 KLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       164 ~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      ..+++.++++|++|+||||+.||-
T Consensus       185 ~~~i~~l~~~~~~v~~vGDg~nD~  208 (215)
T PF00702_consen  185 LRIIKELQVKPGEVAMVGDGVNDA  208 (215)
T ss_dssp             HHHHHHHTCTGGGEEEEESSGGHH
T ss_pred             HHHHHHHhcCCCEEEEEccCHHHH
Confidence            999999999999999999999985

This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....

>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase

Probab=99.58  E-value=5.9e-15  Score=102.79  Aligned_cols=78  Identities=14%  Similarity=0.100  Sum_probs=64.7

Q ss_pred             CChhHHHHHHhhccCcE---EEecCChH------------HHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCC
Q 029593           91 PDPQLRNLLCSITQRKI---IFTNSDRN------------HAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVL  155 (191)
Q Consensus        91 ~~~~~~~~l~~l~~~g~---i~t~~~~~------------~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~  155 (191)
                      ++||+.++|+.|+++|+   |+||++..            .++..++.+|+..  +.+++++....              
T Consensus        43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~~--~~ii~~~~~~~--------------  106 (166)
T TIGR01664        43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVPI--QVLAATHAGLY--------------  106 (166)
T ss_pred             ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCCE--EEEEecCCCCC--------------
Confidence            68999999999999987   99997763            4677889999843  55565554332              


Q ss_pred             CCCCHHHHHHHHHHcC--CCCCceEEecCcc
Q 029593          156 LKPSMDAMKLALHVAN--VDPRHAVRQSSFL  184 (191)
Q Consensus       156 ~kp~~~~~~~~~~~~~--~~p~~~i~iGDs~  184 (191)
                      .||+|.++..++++++  ++|++++||||+.
T Consensus       107 ~KP~p~~~~~~~~~~~~~~~~~~~v~VGD~~  137 (166)
T TIGR01664       107 RKPMTGMWEYLQSQYNSPIKMTRSFYVGDAA  137 (166)
T ss_pred             CCCccHHHHHHHHHcCCCCCchhcEEEECCC
Confidence            4999999999999999  9999999999986

The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.

>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []

Probab=99.57  E-value=9e-14  Score=101.07  Aligned_cols=109  Identities=17%  Similarity=0.200  Sum_probs=79.2

Q ss_pred             CCCccchhhhhhcCCCCCCCCCChhHHHHHHhh--ccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCC---
Q 029593           70 DIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSI--TQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNP---  141 (191)
Q Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l--~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~---  141 (191)
                      ++..+++.+.+..      +++.|++.++++.+  ++.|+   |+|+++.-+++.+++..|+...|+.|++-...-.   
T Consensus        57 gvt~~~I~~~l~~------ip~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~I~TNpa~~~~~G  130 (234)
T PF06888_consen   57 GVTPEDIRDALRS------IPIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSEIFTNPACFDADG  130 (234)
T ss_pred             CCCHHHHHHHHHc------CCCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccceEEeCCceecCCc
Confidence            3666777777766      79999999999999  44666   9999999999999999999999988876321110   


Q ss_pred             ----CCCCCCCCCCCCCCCCC---CHHHHHHHHHH---cCCCCCceEEecCcccccc
Q 029593          142 ----NLSKATRPDEFPVLLKP---SMDAMKLALHV---ANVDPRHAVRQSSFLIFYF  188 (191)
Q Consensus       142 ----~~~~~~~~~~~~~~~kp---~~~~~~~~~~~---~~~~p~~~i~iGDs~~~~~  188 (191)
                          .++..    +..-..-|   |...++..++.   -|+..+++++||||.|||=
T Consensus       131 ~l~v~pyh~----h~C~~C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~C  183 (234)
T PF06888_consen  131 RLRVRPYHS----HGCSLCPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFC  183 (234)
T ss_pred             eEEEeCccC----CCCCcCCCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcC
Confidence                01111    11111111   46777777776   3788899999999999983

It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity

>TIGR01686 FkbH FkbH-like domain

Probab=99.50  E-value=1.2e-13  Score=106.09  Aligned_cols=78  Identities=12%  Similarity=0.127  Sum_probs=70.9

Q ss_pred             CCChhHHHHHHhhccCcE---EEecCChHHHHHHHhh----cCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHH
Q 029593           90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKR----LEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDA  162 (191)
Q Consensus        90 ~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~----~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~  162 (191)
                      .+++++.++|..|+++|+   |+|+++...+...++.    +++..+|+.+.+.                   +||+|..
T Consensus        31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f~~~~~~-------------------~~pk~~~   91 (320)
T TIGR01686        31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDFDARSIN-------------------WGPKSES   91 (320)
T ss_pred             ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHeeEEEEe-------------------cCchHHH
Confidence            468999999999999997   9999999999999999    8888889888664                   2999999


Q ss_pred             HHHHHHHcCCCCCceEEecCcccc
Q 029593          163 MKLALHVANVDPRHAVRQSSFLIF  186 (191)
Q Consensus       163 ~~~~~~~~~~~p~~~i~iGDs~~~  186 (191)
                      +..+++++|+.|+++++|||++.+
T Consensus        92 i~~~~~~l~i~~~~~vfidD~~~d  115 (320)
T TIGR01686        92 LRKIAKKLNLGTDSFLFIDDNPAE  115 (320)
T ss_pred             HHHHHHHhCCCcCcEEEECCCHHH
Confidence            999999999999999999999875

The C-terminal portion of this domain is unique to this family (by BLAST).

>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]

Probab=99.49  E-value=2.2e-13  Score=91.93  Aligned_cols=73  Identities=23%  Similarity=0.319  Sum_probs=64.2

Q ss_pred             CCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q 029593           89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKL  165 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~  165 (191)
                      ....|.+++-+..++++|+   |+||++...+..+.+.+|+    +++..+                   .||.+..+++
T Consensus        45 ~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v----~fi~~A-------------------~KP~~~~fr~  101 (175)
T COG2179          45 PDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGV----PFIYRA-------------------KKPFGRAFRR  101 (175)
T ss_pred             CCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCC----ceeecc-------------------cCccHHHHHH
Confidence            4667788888899999987   9999999999999999988    566654                   3999999999


Q ss_pred             HHHHcCCCCCceEEecCcc
Q 029593          166 ALHVANVDPRHAVRQSSFL  184 (191)
Q Consensus       166 ~~~~~~~~p~~~i~iGDs~  184 (191)
                      ++++++++|++|+||||.+
T Consensus       102 Al~~m~l~~~~vvmVGDqL  120 (175)
T COG2179         102 ALKEMNLPPEEVVMVGDQL  120 (175)
T ss_pred             HHHHcCCChhHEEEEcchh
Confidence            9999999999999999986

>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family

Probab=99.45  E-value=2.1e-14  Score=99.00  Aligned_cols=67  Identities=16%  Similarity=0.110  Sum_probs=59.7

Q ss_pred             HHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHcCCCC
Q 029593           98 LLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDP  174 (191)
Q Consensus        98 ~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~p  174 (191)
                      +++.|+++|+   |+||++...+...++.+|+..+|+.                       .+|++.++..++++++++|
T Consensus        36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~~~~-----------------------~~~k~~~~~~~~~~~~~~~   92 (154)
T TIGR01670        36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHLYQG-----------------------QSNKLIAFSDILEKLALAP   92 (154)
T ss_pred             HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEEEec-----------------------ccchHHHHHHHHHHcCCCH
Confidence            7899999987   9999999999999999999776641                       1778999999999999999


Q ss_pred             CceEEecCccccc
Q 029593          175 RHAVRQSSFLIFY  187 (191)
Q Consensus       175 ~~~i~iGDs~~~~  187 (191)
                      ++|++|||+.||.
T Consensus        93 ~~~~~vGDs~~D~  105 (154)
T TIGR01670        93 ENVAYIGDDLIDW  105 (154)
T ss_pred             HHEEEECCCHHHH
Confidence            9999999999984

The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.

>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional

Probab=99.38  E-value=1.6e-12  Score=100.09  Aligned_cols=88  Identities=14%  Similarity=0.129  Sum_probs=67.1

Q ss_pred             CCCChhHHHHHHhhccCcE---EEecC---------------ChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCC
Q 029593           89 IKPDPQLRNLLCSITQRKI---IFTNS---------------DRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPD  150 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~---i~t~~---------------~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~  150 (191)
                      ..++||+.++|+.|+++|+   |+||+               ....+..+++.+++.  |+.++.+.....         
T Consensus        29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~--fd~i~i~~~~~s---------   97 (354)
T PRK05446         29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIK--FDEVLICPHFPE---------   97 (354)
T ss_pred             ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCc--eeeEEEeCCcCc---------
Confidence            6899999999999999986   99995               234566677888883  666543321110         


Q ss_pred             CCCCCCCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          151 EFPVLLKPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       151 ~~~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      +.....||+|.++..+++++++.|++++||||+.+|.
T Consensus        98 d~~~~rKP~p~~l~~a~~~l~v~~~~svmIGDs~sDi  134 (354)
T PRK05446         98 DNCSCRKPKTGLVEEYLAEGAIDLANSYVIGDRETDV  134 (354)
T ss_pred             ccCCCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHH
Confidence            1112359999999999999999999999999999875

>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family

Probab=99.38  E-value=4.4e-13  Score=101.19  Aligned_cols=86  Identities=16%  Similarity=0.062  Sum_probs=62.0

Q ss_pred             CCChhHHHHHHhhccCcE--EEecCChHHH-HHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q 029593           90 KPDPQLRNLLCSITQRKI--IFTNSDRNHA-ITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLA  166 (191)
Q Consensus        90 ~~~~~~~~~l~~l~~~g~--i~t~~~~~~~-~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~  166 (191)
                      ..++++.+++..|+++|.  ++||.+.... ...+...+...+|+.+.......           ....+||+|.++..+
T Consensus       143 ~~y~~i~~~l~~L~~~g~~~i~Tn~d~~~~~~~~~~~~~~g~~~~~i~~~~g~~-----------~~~~gKP~p~~~~~~  211 (279)
T TIGR01452       143 FSYAKLREACAHLREPGCLFVATNRDPWHPLSDGSRTPGTGSLVAAIETASGRQ-----------PLVVGKPSPYMFECI  211 (279)
T ss_pred             CCHHHHHHHHHHHhcCCCEEEEeCCCCCCCCcCCCcccChHHHHHHHHHHhCCc-----------eeccCCCCHHHHHHH
Confidence            457899999999998876  8888876432 12234455666666554321111           112369999999999


Q ss_pred             HHHcCCCCCceEEecCcc-cc
Q 029593          167 LHVANVDPRHAVRQSSFL-IF  186 (191)
Q Consensus       167 ~~~~~~~p~~~i~iGDs~-~~  186 (191)
                      +++++++|++|+||||++ .|
T Consensus       212 ~~~~~~~~~~~lmIGD~~~tD  232 (279)
T TIGR01452       212 TENFSIDPARTLMVGDRLETD  232 (279)
T ss_pred             HHHhCCChhhEEEECCChHHH
Confidence            999999999999999995 65

This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.

>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668

Probab=99.36  E-value=4.2e-12  Score=88.95  Aligned_cols=75  Identities=19%  Similarity=0.137  Sum_probs=61.9

Q ss_pred             CCCChhHHHHHHhhccCcE---EEecCC-hHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHH
Q 029593           89 IKPDPQLRNLLCSITQRKI---IFTNSD-RNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMK  164 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~---i~t~~~-~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~  164 (191)
                      ..++|++.++|+.|+++|+   ++||++ ...+...++.+++..++         ..              .||+|.++.
T Consensus        42 ~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~~~---------~~--------------~KP~p~~~~   98 (170)
T TIGR01668        42 NEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPVLP---------HA--------------VKPPGCAFR   98 (170)
T ss_pred             CCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEEEc---------CC--------------CCCChHHHH
Confidence            5789999999999999886   999988 56677777777763221         11              399999999


Q ss_pred             HHHHHcCCCCCceEEecCcc-cc
Q 029593          165 LALHVANVDPRHAVRQSSFL-IF  186 (191)
Q Consensus       165 ~~~~~~~~~p~~~i~iGDs~-~~  186 (191)
                      .++++++++|++|++|||++ .|
T Consensus        99 ~~l~~~~~~~~~~l~IGDs~~~D  121 (170)
T TIGR01668        99 RAHPEMGLTSEQVAVVGDRLFTD  121 (170)
T ss_pred             HHHHHcCCCHHHEEEECCcchHH
Confidence            99999999999999999997 45

This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.

>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]

Probab=99.35  E-value=7.4e-11  Score=81.68  Aligned_cols=96  Identities=13%  Similarity=0.088  Sum_probs=67.4

Q ss_pred             CCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCc--ccceeeecccCCCCCCCCCCCCCCCCCCCCCHHH
Q 029593           88 LIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIAD--CFDQIICFETMNPNLSKATRPDEFPVLLKPSMDA  162 (191)
Q Consensus        88 ~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~--~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~  162 (191)
                      .+.+.||+++++..|+++|.   ++|++.+..+..+...+|+..  .+....--+..++  |.+--...+...+--++..
T Consensus        86 k~~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk--~~gfd~~~ptsdsggKa~~  163 (227)
T KOG1615|consen   86 KPTLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGK--YLGFDTNEPTSDSGGKAEV  163 (227)
T ss_pred             CCccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCc--ccccccCCccccCCccHHH
Confidence            47889999999999999987   999999999999999999965  3322211111111  1110011223334455778


Q ss_pred             HHHHHHHcCCCCCceEEecCccccc
Q 029593          163 MKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       163 ~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      +..+.+  +.....++||||+.||-
T Consensus       164 i~~lrk--~~~~~~~~mvGDGatDl  186 (227)
T KOG1615|consen  164 IALLRK--NYNYKTIVMVGDGATDL  186 (227)
T ss_pred             HHHHHh--CCChheeEEecCCcccc
Confidence            888777  88889999999999984

>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional

Probab=99.35  E-value=3.2e-12  Score=93.47  Aligned_cols=90  Identities=11%  Similarity=0.008  Sum_probs=65.0

Q ss_pred             cchhhhhhcCCCCCCCCCChhHHHHHHhhccCcE---EEecCC----hHHHHHHHhhcCC--CcccceeeecccCCCCCC
Q 029593           74 DDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSD----RNHAITCLKRLEI--ADCFDQIICFETMNPNLS  144 (191)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~----~~~~~~~l~~~~l--~~~f~~i~~~~~~~~~~~  144 (191)
                      +++++.+.... .....+.||++++++.|+++|+   ++||.+    ...++..++.+|+  ..+|+.+++++..     
T Consensus        99 ~~fw~~y~~~~-~~~a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~~-----  172 (237)
T PRK11009         99 QKFWEKMNNGW-DEFSIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFAGDKP-----  172 (237)
T ss_pred             HHHHHHHHhcc-cccCcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEcCCCC-----
Confidence            33444443321 2336899999999999999987   889854    4456667777999  8889988887753     


Q ss_pred             CCCCCCCCCCCCCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          145 KATRPDEFPVLLKPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       145 ~~~~~~~~~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                                 .||.+..   .++++++    +++|||+.+|+
T Consensus       173 -----------~K~~K~~---~l~~~~i----~I~IGDs~~Di  197 (237)
T PRK11009        173 -----------GQYTKTQ---WLKKKNI----RIFYGDSDNDI  197 (237)
T ss_pred             -----------CCCCHHH---HHHhcCC----eEEEcCCHHHH
Confidence                       2666543   4556665    99999999996

>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]

Probab=99.35  E-value=1.3e-11  Score=86.99  Aligned_cols=112  Identities=13%  Similarity=0.078  Sum_probs=74.6

Q ss_pred             CCCccchhhhhhcCCCCCCCCCChhHHHHHHhhccCcE----EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCC
Q 029593           70 DIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKI----IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSK  145 (191)
Q Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~----i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~  145 (191)
                      +..++++.+.+..      ++..||+.+++..+++.|-    |+|.++.-.++.+++.+++..+|+.|++-.. ...+..
T Consensus        70 gv~~~~ik~~~r~------iP~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~~IfTNPa-~~da~G  142 (256)
T KOG3120|consen   70 GVRIAEIKQVLRS------IPIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFSEIFTNPA-CVDASG  142 (256)
T ss_pred             CCCHHHHHHHHhc------CCCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHHHHhcCCc-ccCCCC
Confidence            4555666666655      8999999999999999884    9999999999999999999999998876221 100000


Q ss_pred             C-CC-CCC--CCCCCCC----CHHHHHHHHH---HcCCCCCceEEecCcccccc
Q 029593          146 A-TR-PDE--FPVLLKP----SMDAMKLALH---VANVDPRHAVRQSSFLIFYF  188 (191)
Q Consensus       146 ~-~~-~~~--~~~~~kp----~~~~~~~~~~---~~~~~p~~~i~iGDs~~~~~  188 (191)
                      . .+ |-+  .....=|    |...+..+..   +-|+..+++++||||-|||=
T Consensus       143 ~L~v~pyH~~hsC~~CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~C  196 (256)
T KOG3120|consen  143 RLLVRPYHTQHSCNLCPSNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFC  196 (256)
T ss_pred             cEEeecCCCCCccCcCchhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcC
Confidence            0 00 000  1111112    2333333332   23788899999999999983

>PRK11590 hypothetical protein; Provisional

Probab=99.35  E-value=1.1e-11  Score=89.80  Aligned_cols=92  Identities=9%  Similarity=-0.109  Sum_probs=57.7

Q ss_pred             CCCChhHHHHH-HhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHH
Q 029593           89 IKPDPQLRNLL-CSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMK  164 (191)
Q Consensus        89 ~~~~~~~~~~l-~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~  164 (191)
                      ..++|++.+.+ +.++++|.   |+||+....++.+++.+++.. .+.+++++...  .+++.+ ....+.+.-|.   +
T Consensus        94 ~~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~-~~~~i~t~l~~--~~tg~~-~g~~c~g~~K~---~  166 (211)
T PRK11590         94 VTAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLP-RVNLIASQMQR--RYGGWV-LTLRCLGHEKV---A  166 (211)
T ss_pred             CcCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccc-cCceEEEEEEE--EEccEE-CCccCCChHHH---H
Confidence            46799999999 56888785   999999999999999988522 23333333111  111111 01112233333   3


Q ss_pred             HHHHHcCCCCCceEEecCccccc
Q 029593          165 LALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       165 ~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      .+.+.++.+...+.+.|||.+|-
T Consensus       167 ~l~~~~~~~~~~~~aY~Ds~~D~  189 (211)
T PRK11590        167 QLERKIGTPLRLYSGYSDSKQDN  189 (211)
T ss_pred             HHHHHhCCCcceEEEecCCcccH
Confidence            34444466778899999999984

>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544

Probab=99.34  E-value=1.4e-11  Score=91.55  Aligned_cols=86  Identities=12%  Similarity=-0.044  Sum_probs=68.4

Q ss_pred             CCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCccccee------eecccCCCCCCCCCCCCCCCCCCCC
Q 029593           88 LIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQI------ICFETMNPNLSKATRPDEFPVLLKP  158 (191)
Q Consensus        88 ~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i------~~~~~~~~~~~~~~~~~~~~~~~kp  158 (191)
                      .+.+.||+.++++.|+++|+   |+|++....++.+++++++...+..+      ++.+...              .++|
T Consensus       119 ~l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvl--------------tG~~  184 (277)
T TIGR01544       119 DVMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVL--------------KGFK  184 (277)
T ss_pred             CCccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCCeE--------------eCCC
Confidence            47899999999999999987   99999999999999999987655555      3222211              2344


Q ss_pred             CH---------HHHHHHHHHcC--CCCCceEEecCccccc
Q 029593          159 SM---------DAMKLALHVAN--VDPRHAVRQSSFLIFY  187 (191)
Q Consensus       159 ~~---------~~~~~~~~~~~--~~p~~~i~iGDs~~~~  187 (191)
                      .|         ..++..++.++  .++++|++||||.+|-
T Consensus       185 ~P~i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl  224 (277)
T TIGR01544       185 GPLIHTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDL  224 (277)
T ss_pred             CCcccccccHHHHHHHHHHHhCccCCcceEEEECcChhhh
Confidence            44         56667888998  8999999999999984

This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.

>PHA02530 pseT polynucleotide kinase; Provisional

Probab=99.32  E-value=4.5e-12  Score=96.71  Aligned_cols=92  Identities=12%  Similarity=0.003  Sum_probs=75.2

Q ss_pred             CCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCc-ccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHH
Q 029593           89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIAD-CFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMK  164 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~-~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~  164 (191)
                      ..++|++.+++..|+++|+   ++||++....+..++.+++.. +|+.+++.+....  |.     ......||+|..+.
T Consensus       186 ~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~~i~~~~~~~~--~~-----~~~~~~kp~p~~~~  258 (300)
T PHA02530        186 DKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFDDLIGRPPDMH--FQ-----REQGDKRPDDVVKE  258 (300)
T ss_pred             CCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchhhhhCCcchhh--hc-----ccCCCCCCcHHHHH
Confidence            4789999999999999986   999999999999999999986 8999888873110  00     00011499999999


Q ss_pred             HHHHHcCC-CCCceEEecCccccc
Q 029593          165 LALHVANV-DPRHAVRQSSFLIFY  187 (191)
Q Consensus       165 ~~~~~~~~-~p~~~i~iGDs~~~~  187 (191)
                      .++++++. .|++|++|||+.+|-
T Consensus       259 ~~l~~~~~~~~~~~~~vgD~~~d~  282 (300)
T PHA02530        259 EIFWEKIAPKYDVLLAVDDRDQVV  282 (300)
T ss_pred             HHHHHHhccCceEEEEEcCcHHHH
Confidence            99999988 689999999999874

>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458

Probab=99.31  E-value=8.1e-13  Score=98.52  Aligned_cols=85  Identities=15%  Similarity=0.020  Sum_probs=67.8

Q ss_pred             CChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
Q 029593           91 PDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLAL  167 (191)
Q Consensus        91 ~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~  167 (191)
                      .++++.+++..|++.+.   ++||.+.......+..+|+..+|+.+.++....           ....+||+|.+++.++
T Consensus       121 ~y~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~~~~g~g~~~~~i~~~~~~~-----------~~~~gKP~p~~~~~~~  189 (257)
T TIGR01458       121 SYQILNQAFRLLLDGAKPLLIAIGKGRYYKRKDGLALDVGPFVTALEYATDTK-----------ATVVGKPSKTFFLEAL  189 (257)
T ss_pred             CHHHHHHHHHHHHcCCCCEEEEeCCCCCCcCCCCCCCCchHHHHHHHHHhCCC-----------ceeecCCCHHHHHHHH
Confidence            46888999999987765   888888776666677788888888777654322           1223699999999999


Q ss_pred             HHcCCCCCceEEecCcc-cc
Q 029593          168 HVANVDPRHAVRQSSFL-IF  186 (191)
Q Consensus       168 ~~~~~~p~~~i~iGDs~-~~  186 (191)
                      ++++++|++++||||++ +|
T Consensus       190 ~~~~~~~~~~~~vGD~~~~D  209 (257)
T TIGR01458       190 RATGCEPEEAVMIGDDCRDD  209 (257)
T ss_pred             HHhCCChhhEEEECCCcHHH
Confidence            99999999999999996 55

This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.

>smart00577 CPDc catalytic domain of ctd-like phosphatases

Probab=99.28  E-value=4.2e-12  Score=86.96  Aligned_cols=82  Identities=15%  Similarity=0.049  Sum_probs=72.0

Q ss_pred             CCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCc-ccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHH
Q 029593           89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIAD-CFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMK  164 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~-~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~  164 (191)
                      ..++||+.++|+.|++ ++   |+|++....++.+++++++.. +|+.++++++...              +||.   +.
T Consensus        44 v~l~pG~~e~L~~L~~-~~~l~I~Ts~~~~~~~~il~~l~~~~~~f~~i~~~~d~~~--------------~KP~---~~  105 (148)
T smart00577       44 VKKRPGVDEFLKRASE-LFELVVFTAGLRMYADPVLDLLDPKKYFGYRRLFRDECVF--------------VKGK---YV  105 (148)
T ss_pred             EEECCCHHHHHHHHHh-ccEEEEEeCCcHHHHHHHHHHhCcCCCEeeeEEECccccc--------------cCCe---Ee
Confidence            5789999999999984 45   999999999999999999865 5688999888766              4886   99


Q ss_pred             HHHHHcCCCCCceEEecCcccccc
Q 029593          165 LALHVANVDPRHAVRQSSFLIFYF  188 (191)
Q Consensus       165 ~~~~~~~~~p~~~i~iGDs~~~~~  188 (191)
                      ++++.++.+|++|++|||+++++-
T Consensus       106 k~l~~l~~~p~~~i~i~Ds~~~~~  129 (148)
T smart00577      106 KDLSLLGRDLSNVIIIDDSPDSWP  129 (148)
T ss_pred             ecHHHcCCChhcEEEEECCHHHhh
Confidence            999999999999999999998864

>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase

Probab=99.28  E-value=1.9e-11  Score=98.68  Aligned_cols=80  Identities=16%  Similarity=0.113  Sum_probs=66.3

Q ss_pred             CChhHHHHHHhhccCcE---EEecCCh------------HHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCC
Q 029593           91 PDPQLRNLLCSITQRKI---IFTNSDR------------NHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVL  155 (191)
Q Consensus        91 ~~~~~~~~l~~l~~~g~---i~t~~~~------------~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~  155 (191)
                      ++|++.+.|..|+++|+   |+||...            ..+..+++.+|+.  |+.+++.+....              
T Consensus       198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip--fdviia~~~~~~--------------  261 (526)
T TIGR01663       198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP--FQVFIAIGAGFY--------------  261 (526)
T ss_pred             cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc--eEEEEeCCCCCC--------------
Confidence            57999999999999987   8999766            3577788888884  787776654332              


Q ss_pred             CCCCHHHHHHHHHHcC----CCCCceEEecCcccc
Q 029593          156 LKPSMDAMKLALHVAN----VDPRHAVRQSSFLIF  186 (191)
Q Consensus       156 ~kp~~~~~~~~~~~~~----~~p~~~i~iGDs~~~  186 (191)
                      .||+|.++..++++++    +++++++||||+..|
T Consensus       262 RKP~pGm~~~a~~~~~~~~~Id~~~S~~VGDaagr  296 (526)
T TIGR01663       262 RKPLTGMWDHLKEEANDGTEIQEDDCFFVGDAAGR  296 (526)
T ss_pred             CCCCHHHHHHHHHhcCcccCCCHHHeEEeCCcccc
Confidence            5999999999999985    899999999999854

Note that the EC number for the kinase function is: 2.7.1.78

>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family

Probab=99.24  E-value=9.1e-11  Score=87.21  Aligned_cols=80  Identities=11%  Similarity=0.131  Sum_probs=61.3

Q ss_pred             CCCChhHHHHHHhhccCcE---EEecCChH---HHHHHHhhcCCCccc-ceeeecccCCCCCCCCCCCCCCCCCCCCCHH
Q 029593           89 IKPDPQLRNLLCSITQRKI---IFTNSDRN---HAITCLKRLEIADCF-DQIICFETMNPNLSKATRPDEFPVLLKPSMD  161 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~---~~~~~l~~~~l~~~f-~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~  161 (191)
                      ..+.||+.+++..|+++|+   ++||+...   .+...++.+|+...+ +.++..+.                 .++++.
T Consensus       117 a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d~lllr~~-----------------~~~K~~  179 (266)
T TIGR01533       117 AKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEEHLLLKKD-----------------KSSKES  179 (266)
T ss_pred             CCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcceEEeCCC-----------------CCCcHH
Confidence            5789999999999999986   88997743   455778888997643 44554432                 156678


Q ss_pred             HHHHHHHHcCCCCCceEEecCccccccc
Q 029593          162 AMKLALHVANVDPRHAVRQSSFLIFYFD  189 (191)
Q Consensus       162 ~~~~~~~~~~~~p~~~i~iGDs~~~~~~  189 (191)
                      ....+.+.+++    +++|||+.+|+=+
T Consensus       180 rr~~I~~~y~I----vl~vGD~~~Df~~  203 (266)
T TIGR01533       180 RRQKVQKDYEI----VLLFGDNLLDFDD  203 (266)
T ss_pred             HHHHHHhcCCE----EEEECCCHHHhhh
Confidence            88888887777    8999999999844

which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.

>PRK08238 hypothetical protein; Validated

Probab=99.23  E-value=1.5e-10  Score=93.07  Aligned_cols=79  Identities=15%  Similarity=0.094  Sum_probs=61.7

Q ss_pred             CCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q 029593           89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKL  165 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~  165 (191)
                      .+..|++.+.++.++++|.   ++|+++...++.+++++|+   |+.++++++...              .||++.. ..
T Consensus        71 lp~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGl---Fd~Vigsd~~~~--------------~kg~~K~-~~  132 (479)
T PRK08238         71 LPYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGL---FDGVFASDGTTN--------------LKGAAKA-AA  132 (479)
T ss_pred             CCCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC---CCEEEeCCCccc--------------cCCchHH-HH
Confidence            5678999999999999987   9999999999999999987   889999886543              2444322 23


Q ss_pred             HHHHcCCCCCceEEecCccccc
Q 029593          166 ALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       166 ~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      +.+.++  .++++++|||.+|.
T Consensus       133 l~~~l~--~~~~~yvGDS~~Dl  152 (479)
T PRK08238        133 LVEAFG--ERGFDYAGNSAADL  152 (479)
T ss_pred             HHHHhC--ccCeeEecCCHHHH
Confidence            335554  36689999999985

>PLN02645 phosphoglycolate phosphatase

Probab=99.22  E-value=2.9e-11  Score=92.63  Aligned_cols=84  Identities=14%  Similarity=-0.000  Sum_probs=60.5

Q ss_pred             hhHHHHHHhhcc-CcE--EEecCChHH-HHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q 029593           93 PQLRNLLCSITQ-RKI--IFTNSDRNH-AITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALH  168 (191)
Q Consensus        93 ~~~~~~l~~l~~-~g~--i~t~~~~~~-~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~  168 (191)
                      ..+......|+. .|.  ++||.+... ....+...|...+|+.+.++....           ....+||+|.++..+++
T Consensus       173 ~~l~~a~~~l~~~~g~~~i~tn~d~~~~~~~~~~~~g~g~~~~~i~~~~~~~-----------~~~~gKP~p~~~~~a~~  241 (311)
T PLN02645        173 YKIQYATLCIRENPGCLFIATNRDAVTHLTDAQEWAGAGSMVGAIKGSTERE-----------PLVVGKPSTFMMDYLAN  241 (311)
T ss_pred             HHHHHHHHHHhcCCCCEEEEeCCCCCCCCCCCCCccchHHHHHHHHHHhCCC-----------cccCCCChHHHHHHHHH
Confidence            344455566654 465  888888643 233345667777888877655432           22347999999999999


Q ss_pred             HcCCCCCceEEecCcc-ccc
Q 029593          169 VANVDPRHAVRQSSFL-IFY  187 (191)
Q Consensus       169 ~~~~~p~~~i~iGDs~-~~~  187 (191)
                      .++++|++++||||++ +|.
T Consensus       242 ~~~~~~~~~~~VGD~~~~Di  261 (311)
T PLN02645        242 KFGIEKSQICMVGDRLDTDI  261 (311)
T ss_pred             HcCCCcccEEEEcCCcHHHH
Confidence            9999999999999997 663

>PRK01158 phosphoglycolate phosphatase; Provisional

Probab=99.22  E-value=1.7e-11  Score=89.93  Aligned_cols=32  Identities=9%  Similarity=-0.045  Sum_probs=29.6

Q ss_pred             CCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          156 LKPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       156 ~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      +.+|+.+++.+++.+|++++++++|||+.||.
T Consensus       155 ~~~Kg~al~~l~~~~~i~~~~~i~~GD~~NDi  186 (230)
T PRK01158        155 GVNKGTGLKKLAELMGIDPEEVAAIGDSENDL  186 (230)
T ss_pred             CCChHHHHHHHHHHhCCCHHHEEEECCchhhH
Confidence            46679999999999999999999999999984

>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]

Probab=99.21  E-value=1.4e-10  Score=80.86  Aligned_cols=87  Identities=17%  Similarity=0.110  Sum_probs=65.1

Q ss_pred             CCCChhHHHHHHhhccCcE---EEecCCh---------------HHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCC
Q 029593           89 IKPDPQLRNLLCSITQRKI---IFTNSDR---------------NHAITCLKRLEIADCFDQIICFETMNPNLSKATRPD  150 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~---------------~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~  150 (191)
                      +...|++.+++..|++.|+   ++||.+-               ..+...++..|+  .|+.+...-++..         
T Consensus        30 ~~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l~~~gv--~id~i~~Cph~p~---------   98 (181)
T COG0241          30 FQFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKILASQGV--KIDGILYCPHHPE---------   98 (181)
T ss_pred             hccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHHHHHHHHHHHHHHcCC--ccceEEECCCCCC---------
Confidence            5788999999999999987   8888432               223333444444  5677666554443         


Q ss_pred             CCCCCCCCCHHHHHHHHHHcCCCCCceEEecCcccc
Q 029593          151 EFPVLLKPSMDAMKLALHVANVDPRHAVRQSSFLIF  186 (191)
Q Consensus       151 ~~~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~  186 (191)
                      ......||++.++..+++++++++++.++|||++.|
T Consensus        99 ~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~D  134 (181)
T COG0241          99 DNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRLTD  134 (181)
T ss_pred             CCCcccCCChHHHHHHHHHhCCCccceEEecCcHHH
Confidence            334556999999999999999999999999999866

>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457

Probab=99.21  E-value=2.7e-11  Score=90.00  Aligned_cols=84  Identities=11%  Similarity=-0.020  Sum_probs=53.1

Q ss_pred             CCCChhHHHHHHhhccCcE--EEecCChHHHHHHHhhcC---CCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHH
Q 029593           89 IKPDPQLRNLLCSITQRKI--IFTNSDRNHAITCLKRLE---IADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAM  163 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~--i~t~~~~~~~~~~l~~~~---l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~  163 (191)
                      ...++.+...+..|++ |.  ++||.+........-..+   +...+....+.+...              .+||+|.++
T Consensus       120 ~~~y~~l~~a~~~l~~-g~~~i~tN~D~~~~~~~~~~~~~G~~~~~i~~~~~~~~~~--------------~gKP~~~~~  184 (249)
T TIGR01457       120 QIDYEKFATATLAIRK-GAHFIGTNGDLAIPTERGLLPGNGSLITVLEVATGVKPVY--------------IGKPNAIIM  184 (249)
T ss_pred             CCCHHHHHHHHHHHHC-CCeEEEECCCCCCCCCCCCCCCcHHHHHHHHHHhCCCccc--------------cCCChHHHH
Confidence            3456677777777753 43  788876643211100011   111233333333332              369999999


Q ss_pred             HHHHHHcCCCCCceEEecCcc-ccc
Q 029593          164 KLALHVANVDPRHAVRQSSFL-IFY  187 (191)
Q Consensus       164 ~~~~~~~~~~p~~~i~iGDs~-~~~  187 (191)
                      +.+++.++++|++++||||++ +|.
T Consensus       185 ~~~~~~~~~~~~~~~~VGD~~~~Di  209 (249)
T TIGR01457       185 EKAVEHLGTEREETLMVGDNYLTDI  209 (249)
T ss_pred             HHHHHHcCCCcccEEEECCCchhhH
Confidence            999999999999999999997 664

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.

>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional

Probab=99.19  E-value=3.5e-11  Score=90.50  Aligned_cols=31  Identities=3%  Similarity=-0.111  Sum_probs=28.6

Q ss_pred             CCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          157 KPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       157 kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      -.|+.+++.+++.+|++++++++|||+.||.
T Consensus       198 ~~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi  228 (272)
T PRK10530        198 NSKGKRLTQWVEAQGWSMKNVVAFGDNFNDI  228 (272)
T ss_pred             CChHHHHHHHHHHcCCCHHHeEEeCCChhhH
Confidence            4568999999999999999999999999995

>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459

Probab=99.13  E-value=1.5e-10  Score=85.73  Aligned_cols=80  Identities=16%  Similarity=0.034  Sum_probs=65.5

Q ss_pred             CCCChhHHHHHHhhccCcE---EEecCChHHHH--HHHhhcCCCc-ccceeeecccCCCCCCCCCCCCCCCCCCCCCHHH
Q 029593           89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAI--TCLKRLEIAD-CFDQIICFETMNPNLSKATRPDEFPVLLKPSMDA  162 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~--~~l~~~~l~~-~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~  162 (191)
                      ..++||+.++++.|+++|+   ++||+++....  ..++.+|+.. .|+.++++....                   ...
T Consensus        23 ~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~~~Ii~s~~~~-------------------~~~   83 (242)
T TIGR01459        23 NHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADLPEMIISSGEIA-------------------VQM   83 (242)
T ss_pred             CccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCccccceEEccHHHH-------------------HHH
Confidence            3678999999999999986   99998877655  7889999988 899999876432                   246


Q ss_pred             HHHHHHHcCCCCCceEEecCccccc
Q 029593          163 MKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       163 ~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      +..++++++.+|+++++|||+..|.
T Consensus        84 l~~~~~~~~~~~~~~~~vGd~~~d~  108 (242)
T TIGR01459        84 ILESKKRFDIRNGIIYLLGHLENDI  108 (242)
T ss_pred             HHhhhhhccCCCceEEEeCCcccch
Confidence            7777788899999999999987654

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)

>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B

Probab=99.13  E-value=3.2e-10  Score=80.79  Aligned_cols=89  Identities=17%  Similarity=0.124  Sum_probs=58.0

Q ss_pred             hhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCC--CCCCCCCCCCCCCCCCCHHHHHHH-
Q 029593           93 PQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPN--LSKATRPDEFPVLLKPSMDAMKLA-  166 (191)
Q Consensus        93 ~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~--~~~~~~~~~~~~~~kp~~~~~~~~-  166 (191)
                      |++.+++..++++|+   |+|++....++.+++.+++....  +++.+.....  ...+.  ......+ -|...++.+ 
T Consensus        92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~--v~~~~~~~~~~~~~~~~--~~~~~~~-~K~~~l~~~~  166 (192)
T PF12710_consen   92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDN--VIGNELFDNGGGIFTGR--ITGSNCG-GKAEALKELY  166 (192)
T ss_dssp             TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGG--EEEEEEECTTCCEEEEE--EEEEEES-HHHHHHHHHH
T ss_pred             hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceE--EEEEeeeecccceeeee--ECCCCCC-cHHHHHHHHH
Confidence            777799999998887   99999999999999999886521  2222210000  00000  0000000 156777777 


Q ss_pred             --HHHcCCCCCceEEecCccccc
Q 029593          167 --LHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       167 --~~~~~~~p~~~i~iGDs~~~~  187 (191)
                        ... +..+..+++||||.+|.
T Consensus       167 ~~~~~-~~~~~~~~~iGDs~~D~  188 (192)
T PF12710_consen  167 IRDEE-DIDPDRVIAIGDSINDL  188 (192)
T ss_dssp             HHHHH-THTCCEEEEEESSGGGH
T ss_pred             HHhhc-CCCCCeEEEEECCHHHH
Confidence              555 89999999999999985

>PRK10444 UMP phosphatase; Provisional

Probab=99.12  E-value=1.7e-10  Score=85.54  Aligned_cols=34  Identities=21%  Similarity=0.087  Sum_probs=30.7

Q ss_pred             CCCCCCHHHHHHHHHHcCCCCCceEEecCcc-ccc
Q 029593          154 VLLKPSMDAMKLALHVANVDPRHAVRQSSFL-IFY  187 (191)
Q Consensus       154 ~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~-~~~  187 (191)
                      ..+||+|.++..+++.++++|++|+||||++ +|.
T Consensus       171 ~~gKP~~~~~~~~~~~~~~~~~~~v~IGD~~~tDi  205 (248)
T PRK10444        171 YVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDI  205 (248)
T ss_pred             ccCCCCHHHHHHHHHHcCCCcccEEEECCCcHHHH
Confidence            3479999999999999999999999999997 563

>COG4229 Predicted enolase-phosphatase [Energy production and conversion]

Probab=99.07  E-value=1.9e-09  Score=74.04  Aligned_cols=81  Identities=7%  Similarity=-0.005  Sum_probs=66.9

Q ss_pred             CCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhc---CCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHH
Q 029593           89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRL---EIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDA  162 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~---~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~  162 (191)
                      .+++|++.+.+.+.++.|+   |.|+++...+.-+..+.   ++..+|+..+.... +               +|.....
T Consensus       102 ahlypDav~~ik~wk~~g~~vyiYSSGSV~AQkL~Fghs~agdL~~lfsGyfDtti-G---------------~KrE~~S  165 (229)
T COG4229         102 AHLYPDAVQAIKRWKALGMRVYIYSSGSVKAQKLFFGHSDAGDLNSLFSGYFDTTI-G---------------KKRESQS  165 (229)
T ss_pred             cccCHhHHHHHHHHHHcCCcEEEEcCCCchhHHHhhcccccccHHhhhcceeeccc-c---------------ccccchh
Confidence            5789999999999999997   99999988777666554   45567777776532 3               2888899


Q ss_pred             HHHHHHHcCCCCCceEEecCccc
Q 029593          163 MKLALHVANVDPRHAVRQSSFLI  185 (191)
Q Consensus       163 ~~~~~~~~~~~p~~~i~iGDs~~  185 (191)
                      |.+++...|++|.+++++.|.++
T Consensus       166 Y~kIa~~iGl~p~eilFLSDn~~  188 (229)
T COG4229         166 YAKIAGDIGLPPAEILFLSDNPE  188 (229)
T ss_pred             HHHHHHhcCCCchheEEecCCHH
Confidence            99999999999999999999875

>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase

Probab=99.06  E-value=4e-09  Score=80.99  Aligned_cols=97  Identities=21%  Similarity=0.252  Sum_probs=68.9

Q ss_pred             CCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhc-C-------CCcccceeeecccCCCCCCCCCCC------C
Q 029593           88 LIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRL-E-------IADCFDQIICFETMNPNLSKATRP------D  150 (191)
Q Consensus        88 ~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~-~-------l~~~f~~i~~~~~~~~~~~~~~~~------~  150 (191)
                      .+.+.|++.++|+.|+++|+   |+||++...+...++.+ +       +..+||.++++..... =|+...|      .
T Consensus       182 yv~~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~yFD~IIt~a~KP~-FF~~~~pf~~v~~~  260 (343)
T TIGR02244       182 YVLRDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRDYFDVVIVDARKPG-FFTEGRPFRQVDVE  260 (343)
T ss_pred             HhccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHhhCcEEEeCCCCCc-ccCCCCceEEEeCC
Confidence            36779999999999999987   99999999999999996 7       8899999888654221 1211111      0


Q ss_pred             CCCCC------CCC----CHHHHHHHHHHcCCCCCceEEecCccc
Q 029593          151 EFPVL------LKP----SMDAMKLALHVANVDPRHAVRQSSFLI  185 (191)
Q Consensus       151 ~~~~~------~kp----~~~~~~~~~~~~~~~p~~~i~iGDs~~  185 (191)
                      .....      .+|    ...-...+.+.+++++++|++|||++.
T Consensus       261 ~g~~~~~~~~~l~~g~vY~gGn~~~~~~~l~~~~~~vlYvGD~i~  305 (343)
T TIGR02244       261 TGSLKWGEVDGLEPGKVYSGGSLKQFHELLKWRGKEVLYFGDHIY  305 (343)
T ss_pred             CCcccCCccccccCCCeEeCCCHHHHHHHHCCCCCcEEEECCcch
Confidence            00000      011    113467788889999999999999863

A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.

>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB

Probab=99.05  E-value=8e-09  Score=74.79  Aligned_cols=92  Identities=8%  Similarity=-0.066  Sum_probs=55.8

Q ss_pred             CCCChhHHHHHH-hhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHH
Q 029593           89 IKPDPQLRNLLC-SITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMK  164 (191)
Q Consensus        89 ~~~~~~~~~~l~-~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~  164 (191)
                      ..++|++.+.++ .++++|.   |+||+....++.+.+..++... +.+++++....  ..+.+ ....+.+.-|...++
T Consensus        93 ~~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~-~~~i~t~le~~--~gg~~-~g~~c~g~~Kv~rl~  168 (210)
T TIGR01545        93 VTAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHR-LNLIASQIERG--NGGWV-LPLRCLGHEKVAQLE  168 (210)
T ss_pred             CCCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhcccccc-CcEEEEEeEEe--CCceE-cCccCCChHHHHHHH
Confidence            367999999996 7888886   9999999999999888655332 22333321100  00000 111222333344344


Q ss_pred             HHHHHcCCCCCceEEecCccccc
Q 029593          165 LALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       165 ~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                         +.++.+.+.+.+.|||.+|-
T Consensus       169 ---~~~~~~~~~~~aYsDS~~D~  188 (210)
T TIGR01545       169 ---QKIGSPLKLYSGYSDSKQDN  188 (210)
T ss_pred             ---HHhCCChhheEEecCCcccH
Confidence               44455667889999999984

The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.

>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit

Probab=99.05  E-value=3.2e-10  Score=79.03  Aligned_cols=68  Identities=13%  Similarity=0.088  Sum_probs=59.6

Q ss_pred             HHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHcCCC
Q 029593           97 NLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVD  173 (191)
Q Consensus        97 ~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~  173 (191)
                      ..+..|+++|+   |+||++...++..++.+++..+|+.                       .||+|..++.++++++++
T Consensus        41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~~f~~-----------------------~kpkp~~~~~~~~~l~~~   97 (169)
T TIGR02726        41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKRFHEG-----------------------IKKKTEPYAQMLEEMNIS   97 (169)
T ss_pred             HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcEEEec-----------------------CCCCHHHHHHHHHHcCcC
Confidence            45667777886   9999999999999999999877762                       178899999999999999


Q ss_pred             CCceEEecCccccc
Q 029593          174 PRHAVRQSSFLIFY  187 (191)
Q Consensus       174 p~~~i~iGDs~~~~  187 (191)
                      |++|++|||+.||.
T Consensus        98 ~~ev~~iGD~~nDi  111 (169)
T TIGR02726        98 DAEVCYVGDDLVDL  111 (169)
T ss_pred             HHHEEEECCCHHHH
Confidence            99999999999985

Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.

>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily

Probab=98.99  E-value=4e-10  Score=82.42  Aligned_cols=32  Identities=9%  Similarity=-0.181  Sum_probs=29.6

Q ss_pred             CCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          156 LKPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       156 ~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      +.+|+.+++.+++.+|++++++++|||+.||.
T Consensus       147 ~~~K~~~i~~l~~~~~i~~~~~i~~GD~~NDi  178 (225)
T TIGR01482       147 GVNKGVAVKKLKEKLGIKPGETLVCGDSENDI  178 (225)
T ss_pred             CCCHHHHHHHHHHHhCCCHHHEEEECCCHhhH
Confidence            46788999999999999999999999999984

catalyze the same reaction as SPP.

>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal

Probab=98.98  E-value=4.3e-10  Score=81.80  Aligned_cols=65  Identities=6%  Similarity=-0.064  Sum_probs=43.4

Q ss_pred             EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          108 IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       108 i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      +.++...+.+...++..++...... ...+...              .+..|..+++.+++.+|++++++++|||+.||.
T Consensus       112 ~~~~~~~~~~~~~l~~~~~~~~~~~-~~~ei~~--------------~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~  176 (215)
T TIGR01487       112 MREGKDVDEVREIIKERGLNLVDSG-FAIHIMK--------------KGVDKGVGVEKLKELLGIKPEEVAAIGDSENDI  176 (215)
T ss_pred             ecCCccHHHHHHHHHhCCeEEEecC-ceEEEec--------------CCCChHHHHHHHHHHhCCCHHHEEEECCCHHHH
Confidence            3444455666667776555332211 1112111              246678899999999999999999999999984

TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.

>TIGR01684 viral_ppase viral phosphatase

Probab=98.96  E-value=2.1e-09  Score=80.10  Aligned_cols=99  Identities=19%  Similarity=0.333  Sum_probs=71.0

Q ss_pred             ChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCC-----------------CCC
Q 029593           92 DPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATR-----------------PDE  151 (191)
Q Consensus        92 ~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~-----------------~~~  151 (191)
                      .|++.++|++|+++|+   |+|++.+..+...++.+|+..+|+.++++.+.....-.+..                 ...
T Consensus       148 dPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~YFdvIIs~Gdv~~~kp~~e~~d~~~~~~~~~~~f~~d~~~  227 (301)
T TIGR01684       148 DPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDRYFDIIISGGHKAEEYSTMSTEDRQYRYVFTKTPFYLNTTD  227 (301)
T ss_pred             CHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCcccCEEEECCccccCCCCccccccccceEEecCCeEEeCCC
Confidence            4889999999999996   99999999999999999999999999988776553111100                 012


Q ss_pred             CCCCCCCCHHHHHHHHHHcCCCCCceE-EecCcc--ccccccC
Q 029593          152 FPVLLKPSMDAMKLALHVANVDPRHAV-RQSSFL--IFYFDFF  191 (191)
Q Consensus       152 ~~~~~kp~~~~~~~~~~~~~~~p~~~i-~iGDs~--~~~~~~~  191 (191)
                      ...++|. |......+.+.|+..=+++ .|+|=.  |+-||||
T Consensus       228 ~~~lPKS-prvvl~yL~~~gvn~~KtitLVDDl~~Nn~~YD~f  269 (301)
T TIGR01684       228 GKRLPKS-PRVVLWYLYDLGVNYFKSITLVDDLADNNFNYDYF  269 (301)
T ss_pred             CCcCCCC-CeehHHHHHHcCCceeeeEEEeccCcccCccceeE
Confidence            2344554 7788888999998775554 455533  3345554

These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.

>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]

Probab=98.95  E-value=1.3e-09  Score=81.66  Aligned_cols=33  Identities=3%  Similarity=-0.193  Sum_probs=30.2

Q ss_pred             CCCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          155 LLKPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       155 ~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      .+-.|..+++.+++.+|++++++++||||.||.
T Consensus       186 ~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~  218 (264)
T COG0561         186 KGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDI  218 (264)
T ss_pred             CCCchHHHHHHHHHHhCCCHHHeEEeCCccccH
Confidence            356679999999999999999999999999995

>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]

Probab=98.95  E-value=5.8e-09  Score=77.27  Aligned_cols=36  Identities=28%  Similarity=0.206  Sum_probs=34.3

Q ss_pred             CCCCCCCCCCHHHHHHHHHHcCCCCCceEEecCccc
Q 029593          150 DEFPVLLKPSMDAMKLALHVANVDPRHAVRQSSFLI  185 (191)
Q Consensus       150 ~~~~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~  185 (191)
                      .++.+.+||++.++..+.+++++.|++++||||+++
T Consensus       217 R~P~v~GKP~~~m~~~l~~~~~i~psRt~mvGDRL~  252 (306)
T KOG2882|consen  217 RQPIVLGKPSTFMFEYLLEKFNIDPSRTCMVGDRLD  252 (306)
T ss_pred             CCCeecCCCCHHHHHHHHHHcCCCcceEEEEcccch
Confidence            678999999999999999999999999999999986

>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=98.95  E-value=1.3e-09  Score=82.14  Aligned_cols=30  Identities=3%  Similarity=-0.152  Sum_probs=27.7

Q ss_pred             CCHHHHHHHHHHcCCCC-CceEEecCccccc
Q 029593          158 PSMDAMKLALHVANVDP-RHAVRQSSFLIFY  187 (191)
Q Consensus       158 p~~~~~~~~~~~~~~~p-~~~i~iGDs~~~~  187 (191)
                      .|..+++.+++.+|+++ +++++|||+.||.
T Consensus       190 ~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi  220 (273)
T PRK00192        190 DKGKAVRWLKELYRRQDGVETIALGDSPNDL  220 (273)
T ss_pred             CHHHHHHHHHHHHhccCCceEEEEcCChhhH
Confidence            56789999999999999 9999999999984

>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein

Probab=98.93  E-value=1.7e-09  Score=78.90  Aligned_cols=31  Identities=6%  Similarity=-0.228  Sum_probs=28.0

Q ss_pred             CCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          157 KPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       157 kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      -.|+.+++.+++.+|+++++|++|||+.||.
T Consensus       178 ~~Kg~al~~l~~~lgi~~~~vi~~GD~~NDi  208 (221)
T TIGR02463       178 SSKGKAANWLKATYNQPDVKTLGLGDGPNDL  208 (221)
T ss_pred             CCHHHHHHHHHHHhCCCCCcEEEECCCHHHH
Confidence            4467889999999999999999999999984

This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.

>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional

Probab=98.92  E-value=1.8e-09  Score=81.37  Aligned_cols=32  Identities=3%  Similarity=-0.196  Sum_probs=29.2

Q ss_pred             CCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          156 LKPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       156 ~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      +-.|..+++.+++.+|++++++++|||+.||.
T Consensus       186 g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi  217 (272)
T PRK15126        186 GCNKGAALAVLSQHLGLSLADCMAFGDAMNDR  217 (272)
T ss_pred             CCChHHHHHHHHHHhCCCHHHeEEecCCHHHH
Confidence            35579999999999999999999999999984

>PHA03398 viral phosphatase superfamily protein; Provisional

Probab=98.90  E-value=9.5e-09  Score=76.68  Aligned_cols=99  Identities=20%  Similarity=0.337  Sum_probs=70.9

Q ss_pred             ChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCC---C--------------CCCC
Q 029593           92 DPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKA---T--------------RPDE  151 (191)
Q Consensus        92 ~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~---~--------------~~~~  151 (191)
                      .|++.++|++|+++|+   |+||+++..+...++.+|+..+|+.+++++.........   .              -...
T Consensus       150 dp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~yFDvII~~g~i~~k~~~~~~~d~~~~~~~~~~~f~~d~~~  229 (303)
T PHA03398        150 DPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEGYFDIIICGGRKAGEYSRRVIVDNKYKMVFVKKPFYLDVTD  229 (303)
T ss_pred             ChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCccccEEEECCCcccccccceeecccceeEEecCceeEeCCc
Confidence            3888999999999997   899999999999999999999999988877655432111   0              0011


Q ss_pred             CCCCCCCCHHHHHHHHHHcCCCCCceE-EecCcc--ccccccC
Q 029593          152 FPVLLKPSMDAMKLALHVANVDPRHAV-RQSSFL--IFYFDFF  191 (191)
Q Consensus       152 ~~~~~kp~~~~~~~~~~~~~~~p~~~i-~iGDs~--~~~~~~~  191 (191)
                      ...+||. |.....-+.+.|+..=+++ .|+|=.  |+-||||
T Consensus       230 ~~~lPKS-prvVl~yL~~~gvn~~KtiTLVDDl~~Nn~~YD~f  271 (303)
T PHA03398        230 VKNLPKS-PRVVLWYLRKKGVNYFKTITLVDDLKSNNYSYDYF  271 (303)
T ss_pred             ccCCCCC-CeehHHHHHHcCcceeccEEEeccCcccCccceeE
Confidence            2255554 7888999999999875544 456533  3445554

>PRK10513 sugar phosphate phosphatase; Provisional

Probab=98.90  E-value=2.6e-09  Score=80.29  Aligned_cols=32  Identities=6%  Similarity=-0.113  Sum_probs=29.5

Q ss_pred             CCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          156 LKPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       156 ~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      +-.|..+++.+++.+|++++++++|||+.||.
T Consensus       194 gvsKg~al~~l~~~~gi~~~~v~afGD~~NDi  225 (270)
T PRK10513        194 RVNKGTGVKSLAEHLGIKPEEVMAIGDQENDI  225 (270)
T ss_pred             CCChHHHHHHHHHHhCCCHHHEEEECCchhhH
Confidence            46678999999999999999999999999984

>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]

Probab=98.87  E-value=1e-09  Score=81.44  Aligned_cols=33  Identities=24%  Similarity=0.183  Sum_probs=30.4

Q ss_pred             CCCCCCCHHHHHHHHHHcCCCCCceEEecCccc
Q 029593          153 PVLLKPSMDAMKLALHVANVDPRHAVRQSSFLI  185 (191)
Q Consensus       153 ~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~  185 (191)
                      .+.|||++.+++.+++.++.++++++||||++.
T Consensus       186 ~~~GKP~~~i~~~al~~~~~~~~~~~mVGD~~~  218 (269)
T COG0647         186 TVIGKPSPAIYEAALEKLGLDRSEVLMVGDRLD  218 (269)
T ss_pred             cccCCCCHHHHHHHHHHhCCCcccEEEEcCCch
Confidence            456899999999999999999999999999974

>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea

Probab=98.85  E-value=5.8e-09  Score=72.38  Aligned_cols=77  Identities=14%  Similarity=0.213  Sum_probs=54.1

Q ss_pred             CCCChhHHHHHHhhccCcE---EEec-CChHHHHHHHhhcCCC----------cccceeeecccCCCCCCCCCCCCCCCC
Q 029593           89 IKPDPQLRNLLCSITQRKI---IFTN-SDRNHAITCLKRLEIA----------DCFDQIICFETMNPNLSKATRPDEFPV  154 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~---i~t~-~~~~~~~~~l~~~~l~----------~~f~~i~~~~~~~~~~~~~~~~~~~~~  154 (191)
                      +.++|++.++|..|+++|+   ++|- ...+.++..|+.+++.          .+|+..-...                 
T Consensus        44 v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~~~~~~~~~~~~~F~~~eI~~-----------------  106 (169)
T PF12689_consen   44 VSLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEIDDADGDGVPLIEYFDYLEIYP-----------------  106 (169)
T ss_dssp             E---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C----------CCECEEEESS-----------------
T ss_pred             EEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCCccccccccchhhcchhheec-----------------
Confidence            7899999999999999998   7774 3467899999999998          6666633322                 


Q ss_pred             CCCCCHHHHHHHHHHcCCCCCceEEecCcc
Q 029593          155 LLKPSMDAMKLALHVANVDPRHAVRQSSFL  184 (191)
Q Consensus       155 ~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~  184 (191)
                        -+|..-++.+.++.|++++++++|.|-.
T Consensus       107 --gsK~~Hf~~i~~~tgI~y~eMlFFDDe~  134 (169)
T PF12689_consen  107 --GSKTTHFRRIHRKTGIPYEEMLFFDDES  134 (169)
T ss_dssp             --S-HHHHHHHHHHHH---GGGEEEEES-H
T ss_pred             --CchHHHHHHHHHhcCCChhHEEEecCch
Confidence              3557899999999999999999999964

The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.

>PRK10976 putative hydrolase; Provisional

Probab=98.84  E-value=7.4e-09  Score=77.71  Aligned_cols=32  Identities=3%  Similarity=-0.173  Sum_probs=29.3

Q ss_pred             CCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          156 LKPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       156 ~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      +-.|..+++.+++.+|++++++++|||+.||.
T Consensus       188 gvsKg~al~~l~~~lgi~~~~viafGD~~NDi  219 (266)
T PRK10976        188 GVSKGHALEAVAKKLGYSLKDCIAFGDGMNDA  219 (266)
T ss_pred             CCChHHHHHHHHHHcCCCHHHeEEEcCCcccH
Confidence            45578999999999999999999999999994

>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional

Probab=98.82  E-value=6e-09  Score=73.88  Aligned_cols=68  Identities=15%  Similarity=0.131  Sum_probs=57.9

Q ss_pred             HHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHcCCC
Q 029593           97 NLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVD  173 (191)
Q Consensus        97 ~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~  173 (191)
                      ..+..|+++|+   ++||.+...++..++.+++..+|+        +               .++++..+..+++++|++
T Consensus        55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~~f~--------g---------------~~~k~~~l~~~~~~~gl~  111 (183)
T PRK09484         55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITHLYQ--------G---------------QSNKLIAFSDLLEKLAIA  111 (183)
T ss_pred             HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCceeec--------C---------------CCcHHHHHHHHHHHhCCC
Confidence            35666777876   999999999999999999876664        1               266789999999999999


Q ss_pred             CCceEEecCccccc
Q 029593          174 PRHAVRQSSFLIFY  187 (191)
Q Consensus       174 p~~~i~iGDs~~~~  187 (191)
                      |++|++|||+.||.
T Consensus       112 ~~ev~~VGDs~~D~  125 (183)
T PRK09484        112 PEQVAYIGDDLIDW  125 (183)
T ss_pred             HHHEEEECCCHHHH
Confidence            99999999999985

>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=98.81  E-value=9.8e-09  Score=77.30  Aligned_cols=32  Identities=3%  Similarity=-0.256  Sum_probs=29.5

Q ss_pred             CCCCHHHHHHHHHHcCC---CCCceEEecCccccc
Q 029593          156 LKPSMDAMKLALHVANV---DPRHAVRQSSFLIFY  187 (191)
Q Consensus       156 ~kp~~~~~~~~~~~~~~---~p~~~i~iGDs~~~~  187 (191)
                      +-.|..+++.+++.+|+   +++++++||||.||.
T Consensus       185 g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi  219 (271)
T PRK03669        185 SAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDA  219 (271)
T ss_pred             CCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHH
Confidence            46679999999999999   999999999999994

>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]

Probab=98.74  E-value=1.3e-09  Score=76.48  Aligned_cols=33  Identities=36%  Similarity=0.244  Sum_probs=30.8

Q ss_pred             CCCCCCHHHHHHHHHHcCCCCCceEEecCcccc
Q 029593          154 VLLKPSMDAMKLALHVANVDPRHAVRQSSFLIF  186 (191)
Q Consensus       154 ~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~  186 (191)
                      +.+||++..|+.+++.+|++|++++||||..||
T Consensus       178 vvGKP~~~fFe~al~~~gv~p~~aVMIGDD~~d  210 (262)
T KOG3040|consen  178 VVGKPSPFFFESALQALGVDPEEAVMIGDDLND  210 (262)
T ss_pred             EecCCCHHHHHHHHHhcCCChHHheEEcccccc
Confidence            347999999999999999999999999999987

>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []

Probab=98.74  E-value=8.6e-09  Score=71.29  Aligned_cols=80  Identities=20%  Similarity=0.165  Sum_probs=52.3

Q ss_pred             CChhHHHHHHhhccCcE---EEecCC---h-----------HHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCC
Q 029593           91 PDPQLRNLLCSITQRKI---IFTNSD---R-----------NHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFP  153 (191)
Q Consensus        91 ~~~~~~~~l~~l~~~g~---i~t~~~---~-----------~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~  153 (191)
                      ..|++.+.|..|++.|+   |+||..   .           ..+..+++.+++.  +. ++.+....             
T Consensus        30 ~~~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~~~~~~ki~~il~~l~ip--~~-~~~a~~~d-------------   93 (159)
T PF08645_consen   30 FPPGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDLENFHEKIENILKELGIP--IQ-VYAAPHKD-------------   93 (159)
T ss_dssp             C-TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHHHHHHHHHHHHHHHCTS---EE-EEECGCSS-------------
T ss_pred             cchhHHHHHHHHHhcCCeEEEEeCccccccccccchHHHHHHHHHHHHHHcCCc--eE-EEecCCCC-------------
Confidence            34579999999999997   888842   1           2344455566654  22 23322221             


Q ss_pred             CCCCCCHHHHHHHHHHcCC----CCCceEEecCcccc
Q 029593          154 VLLKPSMDAMKLALHVANV----DPRHAVRQSSFLIF  186 (191)
Q Consensus       154 ~~~kp~~~~~~~~~~~~~~----~p~~~i~iGDs~~~  186 (191)
                      ...||.+.|+..+++.++.    +.++++||||+..+
T Consensus        94 ~~RKP~~GM~~~~~~~~~~~~~id~~~Sf~VGDaagr  130 (159)
T PF08645_consen   94 PCRKPNPGMWEFALKDYNDGVEIDLANSFYVGDAAGR  130 (159)
T ss_dssp             TTSTTSSHHHHHHCCCTSTT--S-CCC-EEEESSCHC
T ss_pred             CCCCCchhHHHHHHHhccccccccccceEEEeccCCC
Confidence            2369999999999999874    88999999998443

; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....

>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA

Probab=98.74  E-value=3.6e-08  Score=72.70  Aligned_cols=33  Identities=24%  Similarity=0.215  Sum_probs=29.7

Q ss_pred             CCCCCHHHHHHHHHHcCCCCCce-EEecCcc-ccc
Q 029593          155 LLKPSMDAMKLALHVANVDPRHA-VRQSSFL-IFY  187 (191)
Q Consensus       155 ~~kp~~~~~~~~~~~~~~~p~~~-i~iGDs~-~~~  187 (191)
                      .+||++.+++.++++++++++++ +||||++ +|.
T Consensus       186 ~~KP~~~~~~~~~~~~~~~~~~~~~~IGD~~~~Di  220 (236)
T TIGR01460       186 VGKPSPAIYRAALNLLQARPERRDVMVGDNLRTDI  220 (236)
T ss_pred             ecCCCHHHHHHHHHHhCCCCccceEEECCCcHHHH
Confidence            46999999999999999999887 9999998 563

Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.

>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459

Probab=98.73  E-value=5.5e-09  Score=77.35  Aligned_cols=83  Identities=18%  Similarity=0.108  Sum_probs=65.8

Q ss_pred             CChhHHHHHHhhccCcE--EEecCChHHHHHHHhhcCCCccccee--eecccCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q 029593           91 PDPQLRNLLCSITQRKI--IFTNSDRNHAITCLKRLEIADCFDQI--ICFETMNPNLSKATRPDEFPVLLKPSMDAMKLA  166 (191)
Q Consensus        91 ~~~~~~~~l~~l~~~g~--i~t~~~~~~~~~~l~~~~l~~~f~~i--~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~  166 (191)
                      -++++.+++..|+++|+  ++||.+.......+..++...++..+  .+.+...              .+||+|.+++.+
T Consensus       139 ~~~~~~~~l~~l~~~g~~~i~tN~d~~~~~~~~~~~~~g~~~~~i~~~g~~~~~--------------~gKP~~~~~~~~  204 (242)
T TIGR01459       139 DLDEFDELFAPIVARKIPNICANPDRGINQHGIYRYGAGYYAELIKQLGGKVIY--------------SGKPYPAIFHKA  204 (242)
T ss_pred             CHHHHHHHHHHHHhCCCcEEEECCCEeccCCCceEecccHHHHHHHHhCCcEec--------------CCCCCHHHHHHH
Confidence            36899999999888886  88999888776667777777777755  4444332              369999999999


Q ss_pred             HHHcCCC-CCceEEecCcc-ccc
Q 029593          167 LHVANVD-PRHAVRQSSFL-IFY  187 (191)
Q Consensus       167 ~~~~~~~-p~~~i~iGDs~-~~~  187 (191)
                      +++++.. +++|+||||++ +|.
T Consensus       205 ~~~~~~~~~~~~~~vGD~~~~Di  227 (242)
T TIGR01459       205 LKECSNIPKNRMLMVGDSFYTDI  227 (242)
T ss_pred             HHHcCCCCcccEEEECCCcHHHH
Confidence            9999975 67999999994 664

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)

>COG4996 Predicted phosphatase [General function prediction only]

Probab=98.72  E-value=1e-08  Score=66.67  Aligned_cols=78  Identities=18%  Similarity=0.256  Sum_probs=60.5

Q ss_pred             CCCChhHHHHHHhhccCcEEEec---CChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCH---HH
Q 029593           89 IKPDPQLRNLLCSITQRKIIFTN---SDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSM---DA  162 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~i~t~---~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~---~~  162 (191)
                      ..++|.+++++..++..|.|++.   +....+-..++.+++..+|+.++.                     +|.|   .|
T Consensus        40 v~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aLral~~~~yFhy~Vi---------------------ePhP~K~~M   98 (164)
T COG4996          40 VHLFPDVKETLKWARNSGYILGLASWNFEDKAIKALRALDLLQYFHYIVI---------------------EPHPYKFLM   98 (164)
T ss_pred             EEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHHHHhchhhhEEEEEe---------------------cCCChhHHH
Confidence            67899999999999999984444   455667788899999999999988                     5544   45


Q ss_pred             HHHHHHHc------CCCCCceEEecCccccc
Q 029593          163 MKLALHVA------NVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       163 ~~~~~~~~------~~~p~~~i~iGDs~~~~  187 (191)
                      +.+++..+      .++|+++++++|.-.++
T Consensus        99 L~~llr~i~~er~~~ikP~~Ivy~DDR~iH~  129 (164)
T COG4996          99 LSQLLREINTERNQKIKPSEIVYLDDRRIHF  129 (164)
T ss_pred             HHHHHHHHHHhhccccCcceEEEEecccccH
Confidence            55555443      47899999999986543

>PLN02887 hydrolase family protein

Probab=98.67  E-value=3.3e-08  Score=81.17  Aligned_cols=32  Identities=13%  Similarity=-0.008  Sum_probs=29.5

Q ss_pred             CCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          156 LKPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       156 ~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      +-.|..+++.+++.+|++++++++|||+.||.
T Consensus       505 gvSKG~ALk~L~e~lGI~~eeviAFGDs~NDI  536 (580)
T PLN02887        505 GTSKGNGVKMLLNHLGVSPDEIMAIGDGENDI  536 (580)
T ss_pred             CCCHHHHHHHHHHHcCCCHHHEEEEecchhhH
Confidence            45678999999999999999999999999994

>PTZ00445 p36-lilke protein; Provisional

Probab=98.62  E-value=1e-07  Score=67.67  Aligned_cols=93  Identities=15%  Similarity=0.051  Sum_probs=56.2

Q ss_pred             CCChhHHHHHHhhccCcE---EEecCCh---------------HHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCC
Q 029593           90 KPDPQLRNLLCSITQRKI---IFTNSDR---------------NHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDE  151 (191)
Q Consensus        90 ~~~~~~~~~l~~l~~~g~---i~t~~~~---------------~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~  151 (191)
                      .+.|..+.++.+|++.|+   |+|=++.               +.++..++..+.+.-+..+++.-.....   ...-=.
T Consensus        75 ~~tpefk~~~~~l~~~~I~v~VVTfSd~~~~~~~~~~~~Isg~~li~~~lk~s~~~~~i~~~~~yyp~~w~---~p~~y~  151 (219)
T PTZ00445         75 SVTPDFKILGKRLKNSNIKISVVTFSDKELIPSENRPRYISGDRMVEAALKKSKCDFKIKKVYAYYPKFWQ---EPSDYR  151 (219)
T ss_pred             cCCHHHHHHHHHHHHCCCeEEEEEccchhhccccCCcceechHHHHHHHHHhcCccceeeeeeeeCCcccC---Chhhhh
Confidence            355666666666666665   5554444               2455566655554444555442221110   000001


Q ss_pred             CCCCCCCCHHH--H--HHHHHHcCCCCCceEEecCccc
Q 029593          152 FPVLLKPSMDA--M--KLALHVANVDPRHAVRQSSFLI  185 (191)
Q Consensus       152 ~~~~~kp~~~~--~--~~~~~~~~~~p~~~i~iGDs~~  185 (191)
                      ....-||.|..  |  +.+++++|+.|+++++|+|+..
T Consensus       152 ~~gl~KPdp~iK~yHle~ll~~~gl~peE~LFIDD~~~  189 (219)
T PTZ00445        152 PLGLDAPMPLDKSYHLKQVCSDFNVNPDEILFIDDDMN  189 (219)
T ss_pred             hhcccCCCccchHHHHHHHHHHcCCCHHHeEeecCCHH
Confidence            12345999999  8  9999999999999999999865

>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily

Probab=98.60  E-value=8.4e-08  Score=71.60  Aligned_cols=32  Identities=3%  Similarity=-0.144  Sum_probs=29.5

Q ss_pred             CCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          156 LKPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       156 ~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      +-.|..+++.+++.++++++++++|||+.||.
T Consensus       186 ~~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~  217 (256)
T TIGR00099       186 GVSKGSALQSLAEALGISLEDVIAFGDGMNDI  217 (256)
T ss_pred             CCChHHHHHHHHHHcCCCHHHEEEeCCcHHhH
Confidence            45679999999999999999999999999985

The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.

>COG4359 Uncharacterized conserved protein [Function unknown]

Probab=98.59  E-value=1.2e-06  Score=60.61  Aligned_cols=158  Identities=13%  Similarity=0.082  Sum_probs=84.7

Q ss_pred             eEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccHHHHHHcC--CCCCccchhhhhhcC
Q 029593            6 NCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLRALG--YDIGADDYHGFVHGR   83 (191)
Q Consensus         6 k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~   83 (191)
                      -.|+-|+|||+.-.+....          +-+.+|.+...  .+...+....-+....+..+.  ...+.+++...+...
T Consensus         4 ~vi~sDFDGTITl~Ds~~~----------itdtf~~~e~k--~l~~~vls~tiS~rd~~g~mf~~i~~s~~Eile~llk~   71 (220)
T COG4359           4 PVIFSDFDGTITLNDSNDY----------ITDTFGPGEWK--ALKDGVLSKTISFRDGFGRMFGSIHSSLEEILEFLLKD   71 (220)
T ss_pred             eEEEecCCCceEecchhHH----------HHhccCchHHH--HHHHHHhhCceeHHHHHHHHHHhcCCCHHHHHHHHHhh
Confidence            4788899999987654222          22344443221  222222222222222222211  122234444444432


Q ss_pred             CCCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCccccee--eeccc-CCC-CCCCCCC-CCCCCCC
Q 029593           84 LPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQI--ICFET-MNP-NLSKATR-PDEFPVL  155 (191)
Q Consensus        84 ~~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i--~~~~~-~~~-~~~~~~~-~~~~~~~  155 (191)
                           +.+.|+.+++++.++++++   |+|+|....+..++++++-..-++.+  ++-++ ... .++..-. -+.+..+
T Consensus        72 -----i~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg~h~i~~~~ds~fG~  146 (220)
T COG4359          72 -----IKIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIHIDGQHSIKYTDDSQFGH  146 (220)
T ss_pred             -----cccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEcCCCceeeecCCccccCC
Confidence                 7899999999999999987   99999999999999987622222211  00000 000 0000000 0112223


Q ss_pred             CCCCHHHHHHHHHHcCCCCCceEEecCcccc
Q 029593          156 LKPSMDAMKLALHVANVDPRHAVRQSSFLIF  186 (191)
Q Consensus       156 ~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~  186 (191)
                      .||      +..+.+.-+++.++++|||..|
T Consensus       147 dK~------~vI~~l~e~~e~~fy~GDsvsD  171 (220)
T COG4359         147 DKS------SVIHELSEPNESIFYCGDSVSD  171 (220)
T ss_pred             Ccc------hhHHHhhcCCceEEEecCCccc
Confidence            343      3455666778889999999876

>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []

Probab=98.56  E-value=2.1e-08  Score=74.16  Aligned_cols=31  Identities=13%  Similarity=0.041  Sum_probs=28.8

Q ss_pred             CCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          157 KPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       157 kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      -.|..+++.+++.+|++++++++|||+.||.
T Consensus       185 vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~  215 (254)
T PF08282_consen  185 VSKGSAIKYLLEYLGISPEDIIAFGDSENDI  215 (254)
T ss_dssp             SSHHHHHHHHHHHHTTSGGGEEEEESSGGGH
T ss_pred             CCHHHHHHHHhhhcccccceeEEeecccccH
Confidence            4568999999999999999999999999996

This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....

>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases

Probab=98.56  E-value=5.1e-07  Score=62.53  Aligned_cols=55  Identities=22%  Similarity=0.217  Sum_probs=37.3

Q ss_pred             cE-EEecCC-------hHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHcCC-----
Q 029593          106 KI-IFTNSD-------RNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANV-----  172 (191)
Q Consensus       106 g~-i~t~~~-------~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~-----  172 (191)
                      ++ |+||+.       ...++.+.+.+|+.    .+....                  .||  ..+..+++.++.     
T Consensus        79 ~v~IvSNsaGs~~d~~~~~a~~~~~~lgIp----vl~h~~------------------kKP--~~~~~i~~~~~~~~~~~  134 (168)
T PF09419_consen   79 RVLIVSNSAGSSDDPDGERAEALEKALGIP----VLRHRA------------------KKP--GCFREILKYFKCQKVVT  134 (168)
T ss_pred             eEEEEECCCCcccCccHHHHHHHHHhhCCc----EEEeCC------------------CCC--ccHHHHHHHHhhccCCC
Confidence            35 999973       56677777887762    221111                  277  666777777754     


Q ss_pred             CCCceEEecCcc
Q 029593          173 DPRHAVRQSSFL  184 (191)
Q Consensus       173 ~p~~~i~iGDs~  184 (191)
                      .|+++++|||.+
T Consensus       135 ~p~eiavIGDrl  146 (168)
T PF09419_consen  135 SPSEIAVIGDRL  146 (168)
T ss_pred             CchhEEEEcchH
Confidence            499999999975

All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.

>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial

Probab=98.54  E-value=2.6e-07  Score=68.15  Aligned_cols=32  Identities=3%  Similarity=-0.304  Sum_probs=30.2

Q ss_pred             CCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          156 LKPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       156 ~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      +.+|+.+++.++++++++++++++|||+.||.
T Consensus       157 ~~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~  188 (236)
T TIGR02471       157 RASKGLALRYLSYRWGLPLEQILVAGDSGNDE  188 (236)
T ss_pred             CCChHHHHHHHHHHhCCCHHHEEEEcCCccHH
Confidence            57889999999999999999999999999985

Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.

>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase

Probab=98.53  E-value=7.5e-07  Score=66.26  Aligned_cols=32  Identities=9%  Similarity=-0.042  Sum_probs=30.1

Q ss_pred             CCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          156 LKPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       156 ~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      +.+|+.+++.+++.+++++++|++|||+.||.
T Consensus       165 ~~~K~~al~~l~~~~~i~~~~~i~~GD~~ND~  196 (249)
T TIGR01485       165 GSGKGQALQYLLQKLAMEPSQTLVCGDSGNDI  196 (249)
T ss_pred             CCChHHHHHHHHHHcCCCccCEEEEECChhHH
Confidence            58889999999999999999999999999985

Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.

>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain

Probab=98.45  E-value=1.4e-07  Score=65.56  Aligned_cols=83  Identities=16%  Similarity=0.135  Sum_probs=69.1

Q ss_pred             CCCChhHHHHHHhhccC-cE-EEecCChHHHHHHHhhcCCCc-ccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q 029593           89 IKPDPQLRNLLCSITQR-KI-IFTNSDRNHAITCLKRLEIAD-CFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKL  165 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~-g~-i~t~~~~~~~~~~l~~~~l~~-~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~  165 (191)
                      ....||+.++|+.|++. .+ |.|++.+.+++.+++.++... +|+.+++.+....              .+|+   +.+
T Consensus        41 v~~RPgl~eFL~~l~~~yei~I~Ts~~~~yA~~il~~ldp~~~~f~~~l~r~~~~~--------------~~~~---~~K  103 (162)
T TIGR02251        41 VFKRPHVDEFLERVSKWYELVIFTASLEEYADPVLDILDRGGKVISRRLYRESCVF--------------TNGK---YVK  103 (162)
T ss_pred             EEECCCHHHHHHHHHhcCEEEEEcCCcHHHHHHHHHHHCcCCCEEeEEEEccccEE--------------eCCC---EEe
Confidence            57889999999999886 33 999999999999999999876 8888888765433              2444   667


Q ss_pred             HHHHcCCCCCceEEecCcccccc
Q 029593          166 ALHVANVDPRHAVRQSSFLIFYF  188 (191)
Q Consensus       166 ~~~~~~~~p~~~i~iGDs~~~~~  188 (191)
                      .++.+|.++++|++|||++.++-
T Consensus       104 ~L~~l~~~~~~vIiVDD~~~~~~  126 (162)
T TIGR02251       104 DLSLVGKDLSKVIIIDNSPYSYS  126 (162)
T ss_pred             EchhcCCChhhEEEEeCChhhhc
Confidence            78889999999999999998763

This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.

>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase

Probab=98.40  E-value=4.9e-07  Score=66.21  Aligned_cols=31  Identities=13%  Similarity=0.015  Sum_probs=25.9

Q ss_pred             CCCHHHHHHHHHHcCC--CCCceEEecCccccc
Q 029593          157 KPSMDAMKLALHVANV--DPRHAVRQSSFLIFY  187 (191)
Q Consensus       157 kp~~~~~~~~~~~~~~--~p~~~i~iGDs~~~~  187 (191)
                      -.|+.+++.+++.+++  +++++++|||+.||-
T Consensus       180 ~sK~~al~~l~~~~~~~~~~~~~i~~GD~~nD~  212 (225)
T TIGR02461       180 SDKGKAIKRLLDLYKLRPGAIESVGLGDSENDF  212 (225)
T ss_pred             CCHHHHHHHHHHHhccccCcccEEEEcCCHHHH
Confidence            4457888999998876  777999999999984

Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.

>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B

Probab=98.40  E-value=2.4e-07  Score=55.84  Aligned_cols=32  Identities=28%  Similarity=0.186  Sum_probs=29.6

Q ss_pred             CCCCCHHHHHHHHHHcCCCCCceEEecCc-ccc
Q 029593          155 LLKPSMDAMKLALHVANVDPRHAVRQSSF-LIF  186 (191)
Q Consensus       155 ~~kp~~~~~~~~~~~~~~~p~~~i~iGDs-~~~  186 (191)
                      .+||+|.++..+++.++++|++++||||+ ..|
T Consensus         2 ~gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~~D   34 (75)
T PF13242_consen    2 CGKPSPGMLEQALKRLGVDPSRCVMVGDSLETD   34 (75)
T ss_dssp             CSTTSHHHHHHHHHHHTSGGGGEEEEESSTTTH
T ss_pred             CCCCcHHHHHHHHHHcCCCHHHEEEEcCCcHhH
Confidence            46999999999999999999999999999 554

...

>TIGR01675 plant-AP plant acid phosphatase

Probab=98.38  E-value=7.9e-06  Score=59.52  Aligned_cols=41  Identities=12%  Similarity=0.076  Sum_probs=33.9

Q ss_pred             CCCChhHHHHHHhhccCcE---EEecCChHH---HHHHHhhcCCCcc
Q 029593           89 IKPDPQLRNLLCSITQRKI---IFTNSDRNH---AITCLKRLEIADC  129 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~~---~~~~l~~~~l~~~  129 (191)
                      .++.|++.+++..++++|+   ++|+.+...   +...|...|+..+
T Consensus       119 apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~  165 (229)
T TIGR01675       119 APALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGW  165 (229)
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCc
Confidence            5899999999999999997   888887655   6677778887655

This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.

>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25)

Probab=98.37  E-value=1.4e-06  Score=63.86  Aligned_cols=87  Identities=10%  Similarity=0.004  Sum_probs=55.1

Q ss_pred             CCCChhHHHHHHhhccCcE---EEecCCh---HHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHH
Q 029593           89 IKPDPQLRNLLCSITQRKI---IFTNSDR---NHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDA  162 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~---~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~  162 (191)
                      .+..|++.++++.++++|+   ++||.+.   +....-|+..|...+-..+.-.......        ...  ..-|..-
T Consensus       114 ~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~~~l~lr~~~~~~~--------~~~--~~yK~~~  183 (229)
T PF03767_consen  114 APAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGWDHLILRPDKDPSK--------KSA--VEYKSER  183 (229)
T ss_dssp             GEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTBSCGEEEEESSTSS----------------SHHH
T ss_pred             CcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCccchhcccccccccc--------ccc--cccchHH
Confidence            3788999999999999998   8888654   4566667888876554444444332110        000  0113455


Q ss_pred             HHHHHHH-cCCCCCceEEecCccccccc
Q 029593          163 MKLALHV-ANVDPRHAVRQSSFLIFYFD  189 (191)
Q Consensus       163 ~~~~~~~-~~~~p~~~i~iGDs~~~~~~  189 (191)
                      ...+.++ +.+    ++.|||.++|+-+
T Consensus       184 r~~i~~~Gy~I----i~~iGD~~~D~~~  207 (229)
T PF03767_consen  184 RKEIEKKGYRI----IANIGDQLSDFSG  207 (229)
T ss_dssp             HHHHHHTTEEE----EEEEESSGGGCHC
T ss_pred             HHHHHHcCCcE----EEEeCCCHHHhhc
Confidence            5555555 444    8889999999854

The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....

>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase

Probab=98.36  E-value=5.7e-07  Score=74.35  Aligned_cols=74  Identities=11%  Similarity=0.141  Sum_probs=58.8

Q ss_pred             CCCChhHHHHHHhhccCc-E---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHH
Q 029593           89 IKPDPQLRNLLCSITQRK-I---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMK  164 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g-~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~  164 (191)
                      ..++|++.++++.|+++| +   ++||.+...++..++++|+..+|..+.                     +++++..++
T Consensus       383 d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~~f~~~~---------------------p~~K~~~v~  441 (556)
T TIGR01525       383 DQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDEVHAELL---------------------PEDKLAIVK  441 (556)
T ss_pred             ccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCCeeeccCC---------------------HHHHHHHHH
Confidence            478999999999999999 6   999999999999999999977665431                     133444444


Q ss_pred             HHHHHcCCCCCceEEecCccccc
Q 029593          165 LALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       165 ~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      .    ++..+++|+||||+.||-
T Consensus       442 ~----l~~~~~~v~~vGDg~nD~  460 (556)
T TIGR01525       442 E----LQEEGGVVAMVGDGINDA  460 (556)
T ss_pred             H----HHHcCCEEEEEECChhHH
Confidence            4    444678999999999984

This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.

>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family

Probab=98.34  E-value=5.7e-07  Score=67.19  Aligned_cols=32  Identities=9%  Similarity=-0.219  Sum_probs=29.3

Q ss_pred             CCCCHHHHHHHHHHcCCC--CCceEEecCccccc
Q 029593          156 LKPSMDAMKLALHVANVD--PRHAVRQSSFLIFY  187 (191)
Q Consensus       156 ~kp~~~~~~~~~~~~~~~--p~~~i~iGDs~~~~  187 (191)
                      +-.|..+++.+++.++++  ++++++|||+.||.
T Consensus       174 ~~~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~  207 (256)
T TIGR01486       174 GSDKGKAANALKQFYNQPGGAIKVVGLGDSPNDL  207 (256)
T ss_pred             CCCHHHHHHHHHHHHhhcCCCceEEEEcCCHhhH
Confidence            466789999999999999  99999999999995

This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta

>COG2503 Predicted secreted acid phosphatase [General function prediction only]

Probab=98.31  E-value=4.5e-06  Score=60.29  Aligned_cols=125  Identities=14%  Similarity=0.156  Sum_probs=82.2

Q ss_pred             CceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccHHHHHHcCCCCCccchhhhhhcC
Q 029593            4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLRALGYDIGADDYHGFVHGR   83 (191)
Q Consensus         4 ~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (191)
                      +.++|+.|+|-|++|..+.-  .+.      +....                              ...++.+..++.. 
T Consensus        78 K~~aVvlDlDETvLdNs~Yq--gy~------v~nnk------------------------------~f~pe~Wd~wV~a-  118 (274)
T COG2503          78 KKKAVVLDLDETVLDNSAYQ--GYQ------VLNNK------------------------------GFTPETWDKWVQA-  118 (274)
T ss_pred             CCceEEEecchHhhcCcccc--chh------hhcCC------------------------------CCCccchHHHHhh-
Confidence            34599999999999987421  122      22222                              3344555555544 


Q ss_pred             CCCCCCCCChhHHHHHHhhccCcE---EEecCChHH----HHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCC
Q 029593           84 LPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNH----AITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLL  156 (191)
Q Consensus        84 ~~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~----~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~  156 (191)
                         ....+.||+.++++...++|.   .+||...+.    ...-|++.|+...-...+-....                .
T Consensus       119 ---~~sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~~~~~~~~~llkk~----------------~  179 (274)
T COG2503         119 ---KKSKAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSEGLPQVLESHLLLKKD----------------K  179 (274)
T ss_pred             ---cccccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHcCcccccccceEEeeC----------------C
Confidence               236899999999999999986   788876654    44556777887654442222211                3


Q ss_pred             CCCHHHHHHHHHHcCCCCCceEEecCcccccccc
Q 029593          157 KPSMDAMKLALHVANVDPRHAVRQSSFLIFYFDF  190 (191)
Q Consensus       157 kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~~~~  190 (191)
                      ||+..-++.+-+    .-.=|+.|||+++||=|.
T Consensus       180 k~Ke~R~~~v~k----~~~iVm~vGDNl~DF~d~  209 (274)
T COG2503         180 KSKEVRRQAVEK----DYKIVMLVGDNLDDFGDN  209 (274)
T ss_pred             CcHHHHHHHHhh----ccceeeEecCchhhhcch
Confidence            777777776666    345578999999998654

>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=98.26  E-value=3.6e-06  Score=63.16  Aligned_cols=31  Identities=19%  Similarity=0.108  Sum_probs=25.2

Q ss_pred             CCCHHHHHHHHHHcCCC--CCceEEecCccccc
Q 029593          157 KPSMDAMKLALHVANVD--PRHAVRQSSFLIFY  187 (191)
Q Consensus       157 kp~~~~~~~~~~~~~~~--p~~~i~iGDs~~~~  187 (191)
                      -+|..+++.+.+.++-.  +-.++.+|||+||.
T Consensus       207 ~dKg~A~~~L~~~y~~~~~~~~tiaLGDspND~  239 (302)
T PRK12702        207 LPGEQAVQLLLDCYQRHLGPIKALGIGCSPPDL  239 (302)
T ss_pred             CCHHHHHHHHHHHHHhccCCceEEEecCChhhH
Confidence            46688888888887654  55999999999994

>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase

Probab=98.23  E-value=2e-06  Score=71.18  Aligned_cols=73  Identities=16%  Similarity=0.142  Sum_probs=56.8

Q ss_pred             CCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q 029593           89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKL  165 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~  165 (191)
                      ..++|++.++++.|+++|+   ++|+.+...++...+.+|+.     ++. +. .               +++|+..++.
T Consensus       404 d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~-----~~~-~~-~---------------p~~K~~~v~~  461 (562)
T TIGR01511       404 DQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN-----VRA-EV-L---------------PDDKAALIKE  461 (562)
T ss_pred             ccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc-----EEc-cC-C---------------hHHHHHHHHH
Confidence            4688999999999999987   99999999999999999994     221 11 1               2445555555


Q ss_pred             HHHHcCCCCCceEEecCccccc
Q 029593          166 ALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       166 ~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      +.    .++++|+||||+.||.
T Consensus       462 l~----~~~~~v~~VGDg~nD~  479 (562)
T TIGR01511       462 LQ----EKGRVVAMVGDGINDA  479 (562)
T ss_pred             HH----HcCCEEEEEeCCCccH
Confidence            44    3679999999999994

One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.

>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase

Probab=98.18  E-value=2.5e-06  Score=70.27  Aligned_cols=74  Identities=11%  Similarity=0.128  Sum_probs=58.4

Q ss_pred             CCCChhHHHHHHhhccCcE----EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHH
Q 029593           89 IKPDPQLRNLLCSITQRKI----IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMK  164 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~----i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~  164 (191)
                      ..++|++.++++.|+++|+    ++||.+...++..++++|+..+|..+.                     ++++..   
T Consensus       361 d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~~f~~~~---------------------p~~K~~---  416 (536)
T TIGR01512       361 DEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDEVHAELL---------------------PEDKLE---  416 (536)
T ss_pred             ccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChhhhhccC---------------------cHHHHH---
Confidence            4788999999999999876    999999999999999999977664321                     133444   


Q ss_pred             HHHHHcCCCCCceEEecCccccc
Q 029593          165 LALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       165 ~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                       ++++++..+++++||||+.||.
T Consensus       417 -~i~~l~~~~~~v~~vGDg~nD~  438 (536)
T TIGR01512       417 -IVKELREKYGPVAMVGDGINDA  438 (536)
T ss_pred             -HHHHHHhcCCEEEEEeCCHHHH
Confidence             4444555568999999999984

.

>PLN02177 glycerol-3-phosphate acyltransferase

Probab=98.15  E-value=8.2e-06  Score=66.19  Aligned_cols=88  Identities=14%  Similarity=0.010  Sum_probs=46.6

Q ss_pred             CChhHHHHHHhhccCcEEEecCChHHHHHHHhh-cCCCcccceeeecccC--CCCCCCCCCCCCCCCCCCCCHHHHHHHH
Q 029593           91 PDPQLRNLLCSITQRKIIFTNSDRNHAITCLKR-LEIADCFDQIICFETM--NPNLSKATRPDEFPVLLKPSMDAMKLAL  167 (191)
Q Consensus        91 ~~~~~~~~l~~l~~~g~i~t~~~~~~~~~~l~~-~~l~~~f~~i~~~~~~--~~~~~~~~~~~~~~~~~kp~~~~~~~~~  167 (191)
                      +.+.+.+.+....+. +++|.+....++.+.+. +|++.    +++.+-.  ..+.+++.+.......+.-|..   .+.
T Consensus       111 l~~~a~~~~~~~g~~-vvVSASp~~~Vepfa~~~LGid~----VIgTeLev~~~G~~TG~i~g~~~c~Ge~Kv~---rl~  182 (497)
T PLN02177        111 VHPETWRVFNSFGKR-YIITASPRIMVEPFVKTFLGADK----VLGTELEVSKSGRATGFMKKPGVLVGDHKRD---AVL  182 (497)
T ss_pred             cCHHHHHHHHhCCCE-EEEECCcHHHHHHHHHHcCCCCE----EEecccEECcCCEEeeeecCCCCCccHHHHH---HHH
Confidence            556666555442222 48998899999999975 78843    3333311  0112222211111122222333   333


Q ss_pred             HHcCCCCCceEEecCccccc
Q 029593          168 HVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       168 ~~~~~~p~~~i~iGDs~~~~  187 (191)
                      +.++.+... ++.|||.+|.
T Consensus       183 ~~~g~~~~~-~aYgDS~sD~  201 (497)
T PLN02177        183 KEFGDALPD-LGLGDRETDH  201 (497)
T ss_pred             HHhCCCCce-EEEECCccHH
Confidence            556644334 8999999974

>TIGR01680 Veg_Stor_Prot vegetative storage protein

Probab=98.15  E-value=6.2e-05  Score=55.96  Aligned_cols=41  Identities=7%  Similarity=0.028  Sum_probs=31.8

Q ss_pred             CCCChhHHHHHHhhccCcE---EEecCChH---HHHHHHhhcCCCcc
Q 029593           89 IKPDPQLRNLLCSITQRKI---IFTNSDRN---HAITCLKRLEIADC  129 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~---~~~~~l~~~~l~~~  129 (191)
                      .++.|++.++++.++++|+   ++|+.+..   ....-|+..|...+
T Consensus       144 ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~kaGy~~~  190 (275)
T TIGR01680       144 APALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKKAGYHTW  190 (275)
T ss_pred             CCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHHcCCCCc
Confidence            6889999999999999997   88887753   34555666777654

The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.

>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional

Probab=98.09  E-value=1.1e-05  Score=66.98  Aligned_cols=32  Identities=9%  Similarity=-0.098  Sum_probs=28.8

Q ss_pred             CCCCHHHHHHHHHHcCCCCCceEEe--cCccccc
Q 029593          156 LKPSMDAMKLALHVANVDPRHAVRQ--SSFLIFY  187 (191)
Q Consensus       156 ~kp~~~~~~~~~~~~~~~p~~~i~i--GDs~~~~  187 (191)
                      +-.|..+++.+++.++++.+++++|  |||.||.
T Consensus       611 gvdKG~AL~~L~e~~gI~~~eViafalGDs~NDi  644 (694)
T PRK14502        611 GNDKGKAIKILNELFRLNFGNIHTFGLGDSENDY  644 (694)
T ss_pred             CCCHHHHHHHHHHHhCCCccceEEEEcCCcHhhH
Confidence            3566899999999999999999999  9999995

>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase

Probab=98.02  E-value=1.2e-05  Score=70.04  Aligned_cols=98  Identities=10%  Similarity=0.107  Sum_probs=69.9

Q ss_pred             CCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCC--CCCCCCCCCCCCCCCHHHHH
Q 029593           90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLS--KATRPDEFPVLLKPSMDAMK  164 (191)
Q Consensus        90 ~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~--~~~~~~~~~~~~kp~~~~~~  164 (191)
                      +++|++.++++.|+++|+   ++|+.+...+..+.+.+|+...++.++++++.....-  .........+...+.|+--.
T Consensus       528 p~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~~~~v~g~~l~~~~~~~l~~~~~~~~Vfar~~P~~K~  607 (884)
T TIGR01522       528 PPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFARASPEHKM  607 (884)
T ss_pred             cchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCCceeEhHHhHhCCHHHHHHHhhcCeEEEECCHHHHH
Confidence            788999999999999998   9999999999999999999876666655544321000  00000001122345666667


Q ss_pred             HHHHHcCCCCCceEEecCccccc
Q 029593          165 LALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       165 ~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      .+.+.++-..+.|+|+||+.||-
T Consensus       608 ~iv~~lq~~g~~v~mvGDGvND~  630 (884)
T TIGR01522       608 KIVKALQKRGDVVAMTGDGVNDA  630 (884)
T ss_pred             HHHHHHHHCCCEEEEECCCcccH
Confidence            77777777779999999999994

The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.

>PRK10187 trehalose-6-phosphate phosphatase; Provisional

Probab=98.02  E-value=5.2e-05  Score=57.02  Aligned_cols=31  Identities=16%  Similarity=-0.045  Sum_probs=28.5

Q ss_pred             CCCCHHHHHHHHHHcCCCCCceEEecCcccc
Q 029593          156 LKPSMDAMKLALHVANVDPRHAVRQSSFLIF  186 (191)
Q Consensus       156 ~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~  186 (191)
                      +-.|..+++++++.+++..+++++|||+.||
T Consensus       172 g~~Kg~al~~ll~~~~~~~~~v~~~GD~~nD  202 (266)
T PRK10187        172 GTNKGEAIAAFMQEAPFAGRTPVFVGDDLTD  202 (266)
T ss_pred             CCCHHHHHHHHHHhcCCCCCeEEEEcCCccH
Confidence            3567899999999999999999999999998

>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]

Probab=98.01  E-value=5.8e-06  Score=55.80  Aligned_cols=67  Identities=19%  Similarity=0.121  Sum_probs=55.7

Q ss_pred             HHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHcCCCC
Q 029593           98 LLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDP  174 (191)
Q Consensus        98 ~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~p  174 (191)
                      -+..|.+.|+   |+|+.+...++...+.+|+..    ++-+.                   +.+-..+..+++++++.|
T Consensus        43 Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~----~~qG~-------------------~dK~~a~~~L~~~~~l~~   99 (170)
T COG1778          43 GIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKH----LYQGI-------------------SDKLAAFEELLKKLNLDP   99 (170)
T ss_pred             HHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCce----eeech-------------------HhHHHHHHHHHHHhCCCH
Confidence            3556677777   999999999999999999943    44332                   455799999999999999


Q ss_pred             CceEEecCccccc
Q 029593          175 RHAVRQSSFLIFY  187 (191)
Q Consensus       175 ~~~i~iGDs~~~~  187 (191)
                      ++|.+|||-+||-
T Consensus       100 e~~ayiGDD~~Dl  112 (170)
T COG1778         100 EEVAYVGDDLVDL  112 (170)
T ss_pred             HHhhhhcCccccH
Confidence            9999999999983

>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins

Probab=97.98  E-value=7.2e-05  Score=55.56  Aligned_cols=101  Identities=19%  Similarity=0.290  Sum_probs=68.0

Q ss_pred             CCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCC----------CC-------C
Q 029593           90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKA----------TR-------P  149 (191)
Q Consensus        90 ~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~----------~~-------~  149 (191)
                      .+.|.+.+.|.+|++.|-   +=|.|+++++...++.+++.++||.++++..........          .+       .
T Consensus       142 Ir~~~v~~sL~~Lk~~g~vLvLWSyG~~eHV~~sl~~~~L~~~Fd~ii~~G~~~~~~~~~~~~d~~~~~~f~~~~FylDv  221 (297)
T PF05152_consen  142 IRDPAVYDSLRELKEQGCVLVLWSYGNREHVRHSLKELKLEGYFDIIICGGNKAGEYNSRVIVDRQYKVIFVSKPFYLDV  221 (297)
T ss_pred             cCChHHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHhCCccccEEEEeCCccCCcCCccceeecccceEEeccceEEeC
Confidence            345777888999999984   789999999999999999999999988755332211111          00       0


Q ss_pred             CCCCCCCCCCHHHHHHHHHHcCCCCCceE-EecCcc--ccccccC
Q 029593          150 DEFPVLLKPSMDAMKLALHVANVDPRHAV-RQSSFL--IFYFDFF  191 (191)
Q Consensus       150 ~~~~~~~kp~~~~~~~~~~~~~~~p~~~i-~iGDs~--~~~~~~~  191 (191)
                      .....+||. |.....-+++.|+..=+++ .|+|=.  |+-||||
T Consensus       222 ~~~~~LPKS-PrVVL~yL~k~gvny~KtiTLVDDL~~Nn~~YD~F  265 (297)
T PF05152_consen  222 TNVNNLPKS-PRVVLWYLRKKGVNYFKTITLVDDLKSNNYSYDYF  265 (297)
T ss_pred             CcCCCCCCC-CeehHHHHHHcCCceeeeEEEeccCcccCccceeE
Confidence            111225554 7888899999999875554 455533  3345554

>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []

Probab=97.96  E-value=3.2e-05  Score=57.52  Aligned_cols=31  Identities=6%  Similarity=-0.011  Sum_probs=26.1

Q ss_pred             CCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          157 KPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       157 kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      -.|..+++++++++++++++++++|||.||.
T Consensus       164 a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~  194 (247)
T PF05116_consen  164 ASKGAALRYLMERWGIPPEQVLVAGDSGNDL  194 (247)
T ss_dssp             -SHHHHHHHHHHHHT--GGGEEEEESSGGGH
T ss_pred             CCHHHHHHHHHHHhCCCHHHEEEEeCCCCcH
Confidence            3468999999999999999999999999995

SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....

>smart00775 LNS2 LNS2 domain

Probab=97.81  E-value=0.00021  Score=49.37  Aligned_cols=33  Identities=18%  Similarity=0.234  Sum_probs=24.8

Q ss_pred             CChhHHHHHHhhccCcE---EEecCChHHH---HHHHhh
Q 029593           91 PDPQLRNLLCSITQRKI---IFTNSDRNHA---ITCLKR  123 (191)
Q Consensus        91 ~~~~~~~~l~~l~~~g~---i~t~~~~~~~---~~~l~~  123 (191)
                      ..|++.+++.+++++|+   ++|+.+....   +.+++.
T Consensus        28 ~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~   66 (157)
T smart00775       28 THPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQ   66 (157)
T ss_pred             CCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHH
Confidence            35899999999999987   7777766554   356655

This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.

>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria

Probab=97.81  E-value=0.00048  Score=51.33  Aligned_cols=30  Identities=13%  Similarity=0.062  Sum_probs=26.8

Q ss_pred             CCCCHHHHHHHHHHcCCCCCceEEecCccc
Q 029593          156 LKPSMDAMKLALHVANVDPRHAVRQSSFLI  185 (191)
Q Consensus       156 ~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~  185 (191)
                      +-+++.++..++.+.|..|+.+|+|+|+..
T Consensus       160 ~~~KG~~L~~fL~~~~~~pk~IIfIDD~~~  189 (252)
T PF11019_consen  160 GQDKGEVLKYFLDKINQSPKKIIFIDDNKE  189 (252)
T ss_pred             CCccHHHHHHHHHHcCCCCCeEEEEeCCHH
Confidence            355789999999999999999999999864

The function is not known.

>PRK10671 copA copper exporting ATPase; Provisional

Probab=97.80  E-value=6.5e-05  Score=65.19  Aligned_cols=74  Identities=11%  Similarity=-0.000  Sum_probs=58.2

Q ss_pred             CCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q 029593           89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKL  165 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~  165 (191)
                      -+++|++.+.++.|++.|+   ++|+.+...++.+.+.+|+..++..+                       .  |..-..
T Consensus       649 d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~~~~~~-----------------------~--p~~K~~  703 (834)
T PRK10671        649 DPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDEVIAGV-----------------------L--PDGKAE  703 (834)
T ss_pred             CcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCEEEeCC-----------------------C--HHHHHH
Confidence            3678999999999999987   99998899999999999996544321                       1  122334


Q ss_pred             HHHHcCCCCCceEEecCccccc
Q 029593          166 ALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       166 ~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      ++++++.++++++||||+.||-
T Consensus       704 ~i~~l~~~~~~v~~vGDg~nD~  725 (834)
T PRK10671        704 AIKRLQSQGRQVAMVGDGINDA  725 (834)
T ss_pred             HHHHHhhcCCEEEEEeCCHHHH
Confidence            6666677789999999999984

>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=97.79  E-value=7.7e-05  Score=59.17  Aligned_cols=81  Identities=11%  Similarity=0.152  Sum_probs=60.0

Q ss_pred             CCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q 029593           89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKL  165 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~  165 (191)
                      ..++....+.+..|+++|+   |+|-++...++++.+..     -|.+..-++...          .+..+.|+.+-+++
T Consensus       254 G~~fk~fQ~~Ik~l~kqGVlLav~SKN~~~da~evF~kh-----p~MiLkeedfa~----------~~iNW~~K~eNirk  318 (574)
T COG3882         254 GEAFKTFQNFIKGLKKQGVLLAVCSKNTEKDAKEVFRKH-----PDMILKEEDFAV----------FQINWDPKAENIRK  318 (574)
T ss_pred             chhHHHHHHHHHHHHhccEEEEEecCCchhhHHHHHhhC-----CCeEeeHhhhhh----------heecCCcchhhHHH
Confidence            3555666788999999998   66666666777776653     244444443321          33446999999999


Q ss_pred             HHHHcCCCCCceEEecCcc
Q 029593          166 ALHVANVDPRHAVRQSSFL  184 (191)
Q Consensus       166 ~~~~~~~~p~~~i~iGDs~  184 (191)
                      +++++++..+..++++|++
T Consensus       319 IAkklNlg~dSmvFiDD~p  337 (574)
T COG3882         319 IAKKLNLGLDSMVFIDDNP  337 (574)
T ss_pred             HHHHhCCCccceEEecCCH
Confidence            9999999999999999986

>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5

Probab=97.73  E-value=4.8e-06  Score=64.26  Aligned_cols=21  Identities=33%  Similarity=0.572  Sum_probs=17.3

Q ss_pred             EEEEecCCCCCCChHHHHHHH
Q 029593            7 CLVFDLDDTLYPSETGIAAAV   27 (191)
Q Consensus         7 ~iifD~DGTL~~~~~~~~~~~   27 (191)
                      +++||+||||++++..+..+.
T Consensus         2 ~~ifD~DGvL~~g~~~i~ga~   22 (321)
T TIGR01456         2 GFAFDIDGVLFRGKKPIAGAS   22 (321)
T ss_pred             EEEEeCcCceECCccccHHHH
Confidence            689999999999998765443

The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.

>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=97.69  E-value=8.4e-05  Score=62.74  Aligned_cols=72  Identities=13%  Similarity=0.193  Sum_probs=54.8

Q ss_pred             CCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q 029593           90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLA  166 (191)
Q Consensus        90 ~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~  166 (191)
                      .+.|++++.+.+|++.|+   ++|+-++..++.+.+.+|++.++..+..                     .-|.+.++  
T Consensus       537 ~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId~v~AellP---------------------edK~~~V~--  593 (713)
T COG2217         537 ELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGIDEVRAELLP---------------------EDKAEIVR--  593 (713)
T ss_pred             CCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChHhheccCCc---------------------HHHHHHHH--
Confidence            788999999999999998   8998889999999999999544332221                     22234444  


Q ss_pred             HHHcCCCCCceEEecCcccc
Q 029593          167 LHVANVDPRHAVRQSSFLIF  186 (191)
Q Consensus       167 ~~~~~~~p~~~i~iGDs~~~  186 (191)
                        +++-.-..++||||+.||
T Consensus       594 --~l~~~g~~VamVGDGIND  611 (713)
T COG2217         594 --ELQAEGRKVAMVGDGIND  611 (713)
T ss_pred             --HHHhcCCEEEEEeCCchh
Confidence              444444789999999998

>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins

Probab=97.67  E-value=2.1e-05  Score=56.15  Aligned_cols=29  Identities=21%  Similarity=0.318  Sum_probs=19.6

Q ss_pred             CCCCCCChhHHHHHHhhccCc--E-EEecCCh
Q 029593           86 YDLIKPDPQLRNLLCSITQRK--I-IFTNSDR  114 (191)
Q Consensus        86 ~~~~~~~~~~~~~l~~l~~~g--~-i~t~~~~  114 (191)
                      ....+|.||+.++++.|.+.|  . ++|..+.
T Consensus        69 f~~l~p~~gA~e~l~~L~~~g~~~~~Itar~~  100 (191)
T PF06941_consen   69 FSNLPPIPGAVEALKKLRDKGHEIVIITARPP  100 (191)
T ss_dssp             TTT--B-TTHHHHHHHHHTSTTEEEEEEE-SS
T ss_pred             hcCCCccHHHHHHHHHHHHcCCcEEEEEecCc
Confidence            445799999999999999997  3 6666543

5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....

>PTZ00174 phosphomannomutase; Provisional

Probab=97.67  E-value=3.4e-05  Score=57.37  Aligned_cols=33  Identities=27%  Similarity=0.405  Sum_probs=27.7

Q ss_pred             CCCCceEEEEecCCCCCCChHHHHHHHHHHHHH
Q 029593            1 MDSPFNCLVFDLDDTLYPSETGIAAAVKRNIEG   33 (191)
Q Consensus         1 M~~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~   33 (191)
                      |.|++|+|++|+||||++++..+.....+++.+
T Consensus         1 ~~~~~klia~DlDGTLL~~~~~is~~~~~ai~~   33 (247)
T PTZ00174          1 MEMKKTILLFDVDGTLTKPRNPITQEMKDTLAK   33 (247)
T ss_pred             CCCCCeEEEEECcCCCcCCCCCCCHHHHHHHHH
Confidence            678899999999999999987676666776666

>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain

Probab=97.58  E-value=0.00014  Score=50.16  Aligned_cols=78  Identities=21%  Similarity=0.184  Sum_probs=58.6

Q ss_pred             CCCChhHHHHHHhhccC-cE-EEecCChHHHHHHHhhcCCC-ccc-ceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHH
Q 029593           89 IKPDPQLRNLLCSITQR-KI-IFTNSDRNHAITCLKRLEIA-DCF-DQIICFETMNPNLSKATRPDEFPVLLKPSMDAMK  164 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~-g~-i~t~~~~~~~~~~l~~~~l~-~~f-~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~  164 (191)
                      +.++||+.++|+.|++. .+ |+|++.+.++..+++.++.. .+| +.+++.++...            ...|       
T Consensus        57 v~~rPgv~efL~~l~~~yel~I~T~~~~~yA~~vl~~ldp~~~~F~~ri~~rd~~~~------------~~~K-------  117 (156)
T TIGR02250        57 TKLRPFLHEFLKEASKLYEMHVYTMGTRAYAQAIAKLIDPDGKYFGDRIISRDESGS------------PHTK-------  117 (156)
T ss_pred             EEECCCHHHHHHHHHhhcEEEEEeCCcHHHHHHHHHHhCcCCCeeccEEEEeccCCC------------Cccc-------
Confidence            68899999999999865 23 99999999999999999988 478 56676654221            0012       


Q ss_pred             HHHHHcCCCCCceEEecCccc
Q 029593          165 LALHVANVDPRHAVRQSSFLI  185 (191)
Q Consensus       165 ~~~~~~~~~p~~~i~iGDs~~  185 (191)
                      .+-..++.+.+.+++|+|++.
T Consensus       118 dL~~i~~~d~~~vvivDd~~~  138 (156)
T TIGR02250       118 SLLRLFPADESMVVIIDDRED  138 (156)
T ss_pred             cHHHHcCCCcccEEEEeCCHH
Confidence            122345778899999999985

This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.

>PRK14010 potassium-transporting ATPase subunit B; Provisional

Probab=97.53  E-value=0.00029  Score=59.38  Aligned_cols=72  Identities=10%  Similarity=-0.063  Sum_probs=55.5

Q ss_pred             CCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q 029593           90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLA  166 (191)
Q Consensus        90 ~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~  166 (191)
                      ++.|++++.+++|++.|+   ++|+-+...+..+.+.+|+.++|    ...                   +  |+--..+
T Consensus       441 p~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~~v~----A~~-------------------~--PedK~~i  495 (673)
T PRK14010        441 VIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVDRFV----AEC-------------------K--PEDKINV  495 (673)
T ss_pred             CCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCceEE----cCC-------------------C--HHHHHHH
Confidence            788999999999999998   89988899999999999996532    211                   2  3334444


Q ss_pred             HHHcCCCCCceEEecCcccc
Q 029593          167 LHVANVDPRHAVRQSSFLIF  186 (191)
Q Consensus       167 ~~~~~~~p~~~i~iGDs~~~  186 (191)
                      .+.++-.-+.|.|+||+.||
T Consensus       496 V~~lQ~~G~~VaMtGDGvND  515 (673)
T PRK14010        496 IREEQAKGHIVAMTGDGTND  515 (673)
T ss_pred             HHHHHhCCCEEEEECCChhh
Confidence            44445455779999999998

>PRK01122 potassium-transporting ATPase subunit B; Provisional

Probab=97.48  E-value=0.00036  Score=58.88  Aligned_cols=72  Identities=8%  Similarity=0.052  Sum_probs=54.5

Q ss_pred             CCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q 029593           90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLA  166 (191)
Q Consensus        90 ~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~  166 (191)
                      ++.|++++.++.|++.|+   ++|+-+...++.+.+.+|++++    +...                   .  |+--..+
T Consensus       445 ~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId~v----~A~~-------------------~--PedK~~i  499 (679)
T PRK01122        445 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDDF----LAEA-------------------T--PEDKLAL  499 (679)
T ss_pred             cCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcEE----EccC-------------------C--HHHHHHH
Confidence            678999999999999998   8898889999999999999542    2211                   2  3333344


Q ss_pred             HHHcCCCCCceEEecCcccc
Q 029593          167 LHVANVDPRHAVRQSSFLIF  186 (191)
Q Consensus       167 ~~~~~~~p~~~i~iGDs~~~  186 (191)
                      .+.++-.-+-|.|+||+.||
T Consensus       500 V~~lQ~~G~~VaMtGDGvND  519 (679)
T PRK01122        500 IRQEQAEGRLVAMTGDGTND  519 (679)
T ss_pred             HHHHHHcCCeEEEECCCcch
Confidence            44444445679999999998

>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional

Probab=97.45  E-value=0.00042  Score=59.38  Aligned_cols=71  Identities=11%  Similarity=0.015  Sum_probs=53.2

Q ss_pred             CCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q 029593           90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLA  166 (191)
Q Consensus        90 ~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~  166 (191)
                      +++|++.+.++.|++.|+   ++|+.+...++.+.+.+|+..++.      ..                +.-|+..++. 
T Consensus       568 ~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~~~~~------~~----------------p~~K~~~v~~-  624 (741)
T PRK11033        568 TLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGIDFRAG------LL----------------PEDKVKAVTE-  624 (741)
T ss_pred             CCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCeecC------CC----------------HHHHHHHHHH-
Confidence            788999999999999998   999999999999999999952211      10                1123444444 


Q ss_pred             HHHcCCCCCceEEecCccccc
Q 029593          167 LHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       167 ~~~~~~~p~~~i~iGDs~~~~  187 (191)
                         ++ .+.+|+||||+.||-
T Consensus       625 ---l~-~~~~v~mvGDgiNDa  641 (741)
T PRK11033        625 ---LN-QHAPLAMVGDGINDA  641 (741)
T ss_pred             ---Hh-cCCCEEEEECCHHhH
Confidence               33 346899999999983

>TIGR01497 kdpB K+-transporting ATPase, B subunit

Probab=97.44  E-value=0.00038  Score=58.63  Aligned_cols=73  Identities=7%  Similarity=0.026  Sum_probs=54.5

Q ss_pred             CCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q 029593           90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLA  166 (191)
Q Consensus        90 ~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~  166 (191)
                      ++.|++++.++.|++.|+   ++|+.+...++.+.+.+|+++++    ...  .               +.-|...++..
T Consensus       446 ~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~~v~----a~~--~---------------PedK~~~v~~l  504 (675)
T TIGR01497       446 IVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVDDFI----AEA--T---------------PEDKIALIRQE  504 (675)
T ss_pred             cchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCEEE----cCC--C---------------HHHHHHHHHHH
Confidence            788999999999999998   99999999999999999996533    211  0               12234444444


Q ss_pred             HHHcCCCCCceEEecCccccc
Q 029593          167 LHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       167 ~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      .+    ....+.|+||+.||-
T Consensus       505 q~----~g~~VamvGDG~NDa  521 (675)
T TIGR01497       505 QA----EGKLVAMTGDGTNDA  521 (675)
T ss_pred             HH----cCCeEEEECCCcchH
Confidence            33    345799999999983

One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.

>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase

Probab=97.37  E-value=0.00062  Score=59.76  Aligned_cols=98  Identities=7%  Similarity=-0.015  Sum_probs=60.9

Q ss_pred             CCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCccc----ceeeecccCCCCC--CCCCCCCCCCCCCCCCH
Q 029593           90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCF----DQIICFETMNPNL--SKATRPDEFPVLLKPSM  160 (191)
Q Consensus        90 ~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f----~~i~~~~~~~~~~--~~~~~~~~~~~~~kp~~  160 (191)
                      ++.+++.+.++.|+++|+   ++|+.+...+..+.+.+|+...-    ...+++.....-.  -.........+-..-.|
T Consensus       537 plr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar~~P  616 (917)
T TIGR01116       537 PPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRVEP  616 (917)
T ss_pred             CCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCccccceeeeHHHHhhCCHHHHHHhhhcCeEEEecCH
Confidence            688999999999999998   88888888999999999985311    1122221110000  00000000011123334


Q ss_pred             HHHHHHHHHcCCCCCceEEecCccccc
Q 029593          161 DAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       161 ~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      .--..+.+.++-..+.|.|+||+.||-
T Consensus       617 ~~K~~iV~~lq~~g~~va~iGDG~ND~  643 (917)
T TIGR01116       617 SHKSELVELLQEQGEIVAMTGDGVNDA  643 (917)
T ss_pred             HHHHHHHHHHHhcCCeEEEecCCcchH
Confidence            555666667776778999999999984

The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.

>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=97.25  E-value=0.00085  Score=57.21  Aligned_cols=72  Identities=10%  Similarity=0.091  Sum_probs=54.8

Q ss_pred             CCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q 029593           90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLA  166 (191)
Q Consensus        90 ~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~  166 (191)
                      ++.|++...+..|++.|+   ++|+-+...++.+.++.|+    +.+++-- .                +.-|.+.++.+
T Consensus       723 ~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi----~~V~aev-~----------------P~~K~~~Ik~l  781 (951)
T KOG0207|consen  723 QVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVGI----DNVYAEV-L----------------PEQKAEKIKEI  781 (951)
T ss_pred             ccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCc----ceEEecc-C----------------chhhHHHHHHH
Confidence            788999999999999998   9999999999999999994    5555521 1                12234455544


Q ss_pred             HHHcCCCCCceEEecCcccc
Q 029593          167 LHVANVDPRHAVRQSSFLIF  186 (191)
Q Consensus       167 ~~~~~~~p~~~i~iGDs~~~  186 (191)
                      .+    ....++||||+.||
T Consensus       782 q~----~~~~VaMVGDGIND  797 (951)
T KOG0207|consen  782 QK----NGGPVAMVGDGIND  797 (951)
T ss_pred             Hh----cCCcEEEEeCCCCc
Confidence            44    34789999999998

>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase

Probab=97.21  E-value=0.00049  Score=59.17  Aligned_cols=94  Identities=6%  Similarity=-0.027  Sum_probs=58.7

Q ss_pred             CCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCC--------CCCCCCCCCC
Q 029593           90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATR--------PDEFPVLLKP  158 (191)
Q Consensus        90 ~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~--------~~~~~~~~kp  158 (191)
                      ++.|++.++++.|+++|+   ++|+-+...++.+.+.+|+...   +++++....+......        .....+..+-
T Consensus       442 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~  518 (755)
T TIGR01647       442 PPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTN---IYTADVLLKGDNRDDLPSGELGEMVEDADGFAEV  518 (755)
T ss_pred             CChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCC---CcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEec
Confidence            788999999999999998   8999899999999999999641   2222111100000000        0000011122


Q ss_pred             CHHHHHHHHHHcCCCCCceEEecCcccc
Q 029593          159 SMDAMKLALHVANVDPRHAVRQSSFLIF  186 (191)
Q Consensus       159 ~~~~~~~~~~~~~~~p~~~i~iGDs~~~  186 (191)
                      .|+--..+.+.++-.-+.|.|+||+.||
T Consensus       519 ~Pe~K~~iV~~lq~~G~~VamvGDGvND  546 (755)
T TIGR01647       519 FPEHKYEIVEILQKRGHLVGMTGDGVND  546 (755)
T ss_pred             CHHHHHHHHHHHHhcCCEEEEEcCCccc
Confidence            3444455555555556789999999998

This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.

>COG4087 Soluble P-type ATPase [General function prediction only]

Probab=97.21  E-value=0.0018  Score=42.67  Aligned_cols=76  Identities=5%  Similarity=-0.046  Sum_probs=58.1

Q ss_pred             CCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHH
Q 029593           88 LIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMK  164 (191)
Q Consensus        88 ~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~  164 (191)
                      .-++++.+.+.+..|++. +   +.|+-....+....+..|+.  .+.++..                     .++.+-.
T Consensus        28 gGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~--~~rv~a~---------------------a~~e~K~   83 (152)
T COG4087          28 GGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIP--VERVFAG---------------------ADPEMKA   83 (152)
T ss_pred             CcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCc--eeeeecc---------------------cCHHHHH
Confidence            368899999999999987 5   66655556677777777763  3445543                     2357788


Q ss_pred             HHHHHcCCCCCceEEecCccccc
Q 029593          165 LALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       165 ~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      .++..++-+-+.|+||||+.||-
T Consensus        84 ~ii~eLkk~~~k~vmVGnGaND~  106 (152)
T COG4087          84 KIIRELKKRYEKVVMVGNGANDI  106 (152)
T ss_pred             HHHHHhcCCCcEEEEecCCcchH
Confidence            88888888889999999999984

>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3

Probab=97.16  E-value=0.00077  Score=54.15  Aligned_cols=97  Identities=18%  Similarity=0.123  Sum_probs=55.9

Q ss_pred             CCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhc---------CCCcccceeeecccCCCCCCCC--------
Q 029593           87 DLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRL---------EIADCFDQIICFETMNPNLSKA--------  146 (191)
Q Consensus        87 ~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~---------~l~~~f~~i~~~~~~~~~~~~~--------  146 (191)
                      ..+...|.+..+|+.|+++|.   ++||++..++...+..+         ...++||.|+....... =|+.        
T Consensus       180 kYi~k~~~l~~~L~~lr~~GKklFLiTNS~~~yt~~~M~yl~g~~~~~~~dW~dlFDvVIv~A~KP~-FF~~~~pfr~vd  258 (448)
T PF05761_consen  180 KYIHKDPKLPPWLERLRSAGKKLFLITNSPFDYTNAVMSYLLGPFLGEDPDWRDLFDVVIVDARKPG-FFTEGRPFREVD  258 (448)
T ss_dssp             CCEE--CHHHHHHHHHHCCT-EEEEE-SS-HHHHHHHHHHHCGCCSSTTT-GGGCECEEEES--CCH-HHCT---EEEEE
T ss_pred             HHccCCchHHHHHHHHHhcCceEEEecCCCCchhhhhhhhccCCCCCCCCChhhheeEEEEcCCCCc-ccCCCCceEEEE
Confidence            345667899999999999994   99999999999988875         24467999876432100 0000        


Q ss_pred             --CCCCC----CCCCCCC---CHHHHHHHHHHcCCCCCceEEecCcc
Q 029593          147 --TRPDE----FPVLLKP---SMDAMKLALHVANVDPRHAVRQSSFL  184 (191)
Q Consensus       147 --~~~~~----~~~~~kp---~~~~~~~~~~~~~~~p~~~i~iGDs~  184 (191)
                        +....    .....+.   ...-...+.+.+|....+|++|||++
T Consensus       259 ~~~g~l~~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDhi  305 (448)
T PF05761_consen  259 TETGKLKWGKYVGPLEKGKVYSGGNWDQLHKLLGWRGKEVLYFGDHI  305 (448)
T ss_dssp             TTTSSEECS---SS--TC-EEEE--HHHHHHHCT--GGGEEEEESST
T ss_pred             CCCCccccccccccccCCCEeecCCHHHHHHHHccCCCeEEEECCch
Confidence              00000    0001111   12446677788899999999999986

1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....

>PRK10517 magnesium-transporting ATPase MgtA; Provisional

Probab=97.07  E-value=0.0015  Score=57.31  Aligned_cols=93  Identities=5%  Similarity=0.004  Sum_probs=60.0

Q ss_pred             CCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCC----CCCCCCCCCCCCCHHH
Q 029593           90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKA----TRPDEFPVLLKPSMDA  162 (191)
Q Consensus        90 ~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~----~~~~~~~~~~kp~~~~  162 (191)
                      ++.|++.++++.|+++|+   ++|+-+...+..+.+.+|+..  +.++++.+...-  +.    .......+...-.|+-
T Consensus       550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~--~~v~~G~el~~l--~~~el~~~~~~~~VfAr~sPe~  625 (902)
T PRK10517        550 PPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDA--GEVLIGSDIETL--SDDELANLAERTTLFARLTPMH  625 (902)
T ss_pred             cchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCc--cCceeHHHHHhC--CHHHHHHHHhhCcEEEEcCHHH
Confidence            678999999999999998   899988999999999999952  233333322110  00    0000001112233455


Q ss_pred             HHHHHHHcCCCCCceEEecCcccc
Q 029593          163 MKLALHVANVDPRHAVRQSSFLIF  186 (191)
Q Consensus       163 ~~~~~~~~~~~p~~~i~iGDs~~~  186 (191)
                      -..+.+.++-.-+.|.|+|||.||
T Consensus       626 K~~IV~~Lq~~G~vVam~GDGvND  649 (902)
T PRK10517        626 KERIVTLLKREGHVVGFMGDGIND  649 (902)
T ss_pred             HHHHHHHHHHCCCEEEEECCCcch
Confidence            555555555556789999999998

>PRK15122 magnesium-transporting ATPase; Provisional

Probab=97.03  E-value=0.0015  Score=57.28  Aligned_cols=94  Identities=6%  Similarity=0.011  Sum_probs=60.2

Q ss_pred             CCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCC---CCCCCCCCCCCCCCCCCHHHH
Q 029593           90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPN---LSKATRPDEFPVLLKPSMDAM  163 (191)
Q Consensus        90 ~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~---~~~~~~~~~~~~~~kp~~~~~  163 (191)
                      ++.|++.++++.|+++|+   ++|+-+...+..+.+.+|+..  +.++++.+...-   ... .......+...-.|+--
T Consensus       550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~--~~vi~G~el~~~~~~el~-~~v~~~~VfAr~sPe~K  626 (903)
T PRK15122        550 PPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLEP--GEPLLGTEIEAMDDAALA-REVEERTVFAKLTPLQK  626 (903)
T ss_pred             ccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC--CCccchHhhhhCCHHHHH-HHhhhCCEEEEeCHHHH
Confidence            778999999999999998   889888899999999999952  223332222110   000 00000011123345555


Q ss_pred             HHHHHHcCCCCCceEEecCcccc
Q 029593          164 KLALHVANVDPRHAVRQSSFLIF  186 (191)
Q Consensus       164 ~~~~~~~~~~p~~~i~iGDs~~~  186 (191)
                      ..+.+.++-.-+-|.|+|||.||
T Consensus       627 ~~iV~~Lq~~G~vVamtGDGvND  649 (903)
T PRK15122        627 SRVLKALQANGHTVGFLGDGIND  649 (903)
T ss_pred             HHHHHHHHhCCCEEEEECCCchh
Confidence            55556555556789999999998

>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase

Probab=97.03  E-value=0.002  Score=56.28  Aligned_cols=94  Identities=4%  Similarity=0.014  Sum_probs=57.7

Q ss_pred             CCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCC---CCCCCCCCCCCCCCCCCHHHH
Q 029593           90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPN---LSKATRPDEFPVLLKPSMDAM  163 (191)
Q Consensus        90 ~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~---~~~~~~~~~~~~~~kp~~~~~  163 (191)
                      ++.|++.+.++.|+++|+   ++|+-+...+..+.+.+|+..  +.++++.+....   .+.. ......+...-.|+--
T Consensus       515 p~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~--~~v~~g~~l~~~~~~el~~-~~~~~~vfAr~~Pe~K  591 (867)
T TIGR01524       515 PPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDA--NDFLLGADIEELSDEELAR-ELRKYHIFARLTPMQK  591 (867)
T ss_pred             CCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC--CCeeecHhhhhCCHHHHHH-HhhhCeEEEECCHHHH
Confidence            778999999999999998   899888889999999999952  223332221100   0000 0000001112233444


Q ss_pred             HHHHHHcCCCCCceEEecCcccc
Q 029593          164 KLALHVANVDPRHAVRQSSFLIF  186 (191)
Q Consensus       164 ~~~~~~~~~~p~~~i~iGDs~~~  186 (191)
                      ..+.+.++-.-+.|.|+||+.||
T Consensus       592 ~~iV~~lq~~G~vVam~GDGvND  614 (867)
T TIGR01524       592 SRIIGLLKKAGHTVGFLGDGIND  614 (867)
T ss_pred             HHHHHHHHhCCCEEEEECCCccc
Confidence            44444444445689999999998

The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.

>KOG2630 consensus Enolase-phosphatase E-1 [Amino acid transport and metabolism]

Probab=97.01  E-value=0.014  Score=42.29  Aligned_cols=79  Identities=9%  Similarity=0.056  Sum_probs=58.0

Q ss_pred             CCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcC---CCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHH
Q 029593           90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLE---IADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAM  163 (191)
Q Consensus        90 ~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~---l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~  163 (191)
                      ..++++..++++++..|+   |.|+++...++-....-+   +..+++..+.. ..+.               |-....|
T Consensus       123 ~v~aDv~~a~e~w~~~g~~vyIYSSgsv~AqKllfg~s~~gdl~~y~~gyfDt-~iG~---------------K~e~~sy  186 (254)
T KOG2630|consen  123 HVYADVLPAIERWSGEGVRVYIYSSGSVAAQKLLFGYSDAGDLRKYISGYFDT-TIGL---------------KVESQSY  186 (254)
T ss_pred             cccchhHHHHHHHhhcCceEEEEcCCcHHHHHHHHcccCcchHHHHhhhhhhc-cccc---------------eehhHHH
Confidence            688999999999999987   888888776665554432   22233333332 2222               7778999


Q ss_pred             HHHHHHcCCCCCceEEecCcc
Q 029593          164 KLALHVANVDPRHAVRQSSFL  184 (191)
Q Consensus       164 ~~~~~~~~~~p~~~i~iGDs~  184 (191)
                      ..+.+.++.+|.++++.-|-+
T Consensus       187 ~~I~~~Ig~s~~eiLfLTd~~  207 (254)
T KOG2630|consen  187 KKIGHLIGKSPREILFLTDVP  207 (254)
T ss_pred             HHHHHHhCCChhheEEeccCh
Confidence            999999999999999988864

>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase

Probab=96.98  E-value=0.0015  Score=57.66  Aligned_cols=97  Identities=10%  Similarity=-0.042  Sum_probs=58.6

Q ss_pred             CCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCC--CCCCCCCCCCCCCCCHHHHH
Q 029593           90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLS--KATRPDEFPVLLKPSMDAMK  164 (191)
Q Consensus        90 ~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~--~~~~~~~~~~~~kp~~~~~~  164 (191)
                      ++.|++.++++.|+++|+   ++|+-+...+..+.+.+|+..--..++++++.....-  ...+.....+...-.|+--.
T Consensus       579 plr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~~~vi~G~~~~~l~~~el~~~i~~~~Vfar~sPe~K~  658 (941)
T TIGR01517       579 PLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFGGLAMEGKEFRRLVYEEMDPILPKLRVLARSSPLDKQ  658 (941)
T ss_pred             CCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCCCceEeeHHHhhhCCHHHHHHHhccCeEEEECCHHHHH
Confidence            788999999999999998   8898889999999999999642223333332111000  00000000011122234444


Q ss_pred             HHHHHcCCCCCceEEecCcccc
Q 029593          165 LALHVANVDPRHAVRQSSFLIF  186 (191)
Q Consensus       165 ~~~~~~~~~p~~~i~iGDs~~~  186 (191)
                      .+.+.++-.-+.|.|+|||.||
T Consensus       659 ~iV~~lq~~g~vVam~GDGvND  680 (941)
T TIGR01517       659 LLVLMLKDMGEVVAVTGDGTND  680 (941)
T ss_pred             HHHHHHHHCCCEEEEECCCCch
Confidence            4444444445689999999998

The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.

>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=96.94  E-value=0.0063  Score=43.85  Aligned_cols=28  Identities=7%  Similarity=-0.181  Sum_probs=20.0

Q ss_pred             HHHHHHHHHHcC-CCCCc-eEEecCccccc
Q 029593          160 MDAMKLALHVAN-VDPRH-AVRQSSFLIFY  187 (191)
Q Consensus       160 ~~~~~~~~~~~~-~~p~~-~i~iGDs~~~~  187 (191)
                      ..+...+++.+. ..+.+ ++.+|||+||+
T Consensus       193 g~Aa~~ll~~y~rl~~~r~t~~~GDg~nD~  222 (274)
T COG3769         193 GQAANWLLETYRRLGGARTTLGLGDGPNDA  222 (274)
T ss_pred             cHHHHHHHHHHHhcCceeEEEecCCCCCcc
Confidence            456666666554 44555 89999999996

>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type

Probab=96.74  E-value=0.0038  Score=55.66  Aligned_cols=97  Identities=7%  Similarity=-0.060  Sum_probs=59.7

Q ss_pred             CCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcc----------cceeeecccCCCCCC--CCCCCCCCCC
Q 029593           90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADC----------FDQIICFETMNPNLS--KATRPDEFPV  154 (191)
Q Consensus        90 ~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~----------f~~i~~~~~~~~~~~--~~~~~~~~~~  154 (191)
                      ++.|++.++++.|+++|+   ++|+.+...+..+.+.+|+..-          -+.++++.......-  .........+
T Consensus       646 p~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~~~~~V  725 (1053)
T TIGR01523       646 PPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDLKALCLV  725 (1053)
T ss_pred             CCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccccccccceeeehHHhhhcCHHHHHHHhhcCeE
Confidence            788999999999999998   9999899999999999999532          112333332221000  0000000001


Q ss_pred             CCCCCHHHHHHHHHHcCCCCCceEEecCcccc
Q 029593          155 LLKPSMDAMKLALHVANVDPRHAVRQSSFLIF  186 (191)
Q Consensus       155 ~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~  186 (191)
                      ...-.|.--..+.+.++-.-+.|.|+|||.||
T Consensus       726 ~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvND  757 (1053)
T TIGR01523       726 IARCAPQTKVKMIEALHRRKAFCAMTGDGVND  757 (1053)
T ss_pred             EEecCHHHHHHHHHHHHhcCCeeEEeCCCcch
Confidence            12223444444555554456789999999998

The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.

>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=96.73  E-value=0.0042  Score=54.66  Aligned_cols=98  Identities=12%  Similarity=0.077  Sum_probs=64.6

Q ss_pred             CCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccc--eeeecccCCCCCCC--CCCCCCCCCCCCCCHH
Q 029593           89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFD--QIICFETMNPNLSK--ATRPDEFPVLLKPSMD  161 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~--~i~~~~~~~~~~~~--~~~~~~~~~~~kp~~~  161 (191)
                      -+|.++++++++.|+++|+   ++|+-+...+..+.+.+|+..--.  .++++.......-.  .....+..+-..-.|.
T Consensus       546 Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~VfARvsP~  625 (917)
T COG0474         546 DPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAESALVIDGAELDALSDEELAELVEELSVFARVSPE  625 (917)
T ss_pred             CCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHcCCCCCCCceeEeehHHhhhcCHHHHHHHhhhCcEEEEcCHH
Confidence            3789999999999999998   999989999999999999866543  35555543320000  0000011122223455


Q ss_pred             HHHHHHHHcCCCCCceEEecCcccc
Q 029593          162 AMKLALHVANVDPRHAVRQSSFLIF  186 (191)
Q Consensus       162 ~~~~~~~~~~~~p~~~i~iGDs~~~  186 (191)
                      --.++.+.++-.-.-|.|+|||.||
T Consensus       626 qK~~IV~~lq~~g~vVamtGDGvND  650 (917)
T COG0474         626 QKARIVEALQKSGHVVAMTGDGVND  650 (917)
T ss_pred             HHHHHHHHHHhCCCEEEEeCCCchh
Confidence            5555555555556789999999998

>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB

Probab=96.64  E-value=0.0014  Score=47.07  Aligned_cols=32  Identities=9%  Similarity=-0.228  Sum_probs=30.0

Q ss_pred             CCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          156 LKPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       156 ~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      +.+|+.+++.++++++++++++++|||+.||.
T Consensus       161 ~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~  192 (204)
T TIGR01484       161 GVDKGSALQALLKELNGKRDEILAFGDSGNDE  192 (204)
T ss_pred             CCChHHHHHHHHHHhCCCHHHEEEEcCCHHHH
Confidence            57789999999999999999999999999985

The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.

>PLN02423 phosphomannomutase

Probab=96.61  E-value=0.0016  Score=48.44  Aligned_cols=31  Identities=16%  Similarity=0.260  Sum_probs=23.5

Q ss_pred             CceEEE-EecCCCCCCChHHHHHHHHHHHHHH
Q 029593            4 PFNCLV-FDLDDTLYPSETGIAAAVKRNIEGF   34 (191)
Q Consensus         4 ~~k~ii-fD~DGTL~~~~~~~~~~~~~~~~~~   34 (191)
                      +++.++ ||+||||++++..+.....+++++.
T Consensus         5 ~~~~i~~~D~DGTLl~~~~~i~~~~~~ai~~l   36 (245)
T PLN02423          5 KPGVIALFDVDGTLTAPRKEATPEMLEFMKEL   36 (245)
T ss_pred             ccceEEEEeccCCCcCCCCcCCHHHHHHHHHH
Confidence            567666 9999999998876766666666663

>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5

Probab=96.46  E-value=0.0028  Score=49.02  Aligned_cols=34  Identities=15%  Similarity=-0.116  Sum_probs=27.8

Q ss_pred             CCCCCCCHHHHHHHHHHc--------CC-----CCCceEEecCcc-cc
Q 029593          153 PVLLKPSMDAMKLALHVA--------NV-----DPRHAVRQSSFL-IF  186 (191)
Q Consensus       153 ~~~~kp~~~~~~~~~~~~--------~~-----~p~~~i~iGDs~-~~  186 (191)
                      ...|||++.+++.+++.+        ++     ++++++||||++ .|
T Consensus       229 ~~~GKP~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~mIGD~~~tD  276 (321)
T TIGR01456       229 YTLGKPTKLTYDFAEDVLIDWEKRLSGTKPSTSPFHALYMVGDNPASD  276 (321)
T ss_pred             EEcCCCChHHHHHHHHHHHHHHhhhccccccCCChheEEEEcCChhhh
Confidence            356899999999998887        43     457999999998 54

The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.

>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]

Probab=96.41  E-value=0.009  Score=50.95  Aligned_cols=97  Identities=8%  Similarity=0.016  Sum_probs=63.5

Q ss_pred             CCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccc----eeeecccCCCCC--CCCCCCCCCCCCCCCCH
Q 029593           90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFD----QIICFETMNPNL--SKATRPDEFPVLLKPSM  160 (191)
Q Consensus        90 ~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~----~i~~~~~~~~~~--~~~~~~~~~~~~~kp~~  160 (191)
                      +|++++++.++.+++.|+   ++|+-+...++.+.++.|+...-+    ..++++....-.  ....+.....+-..-.|
T Consensus       584 PPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR~~P  663 (972)
T KOG0202|consen  584 PPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDEDVSSMALTGSEFDDLSDEELDDAVRRVLVFARAEP  663 (972)
T ss_pred             CCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCccccccccchhhhhcCCHHHHHHHhhcceEEEecCc
Confidence            889999999999999998   899999999999999999865544    233333221100  00000001111111234


Q ss_pred             HHHHHHHHHcCCCCCceEEecCcccc
Q 029593          161 DAMKLALHVANVDPRHAVRQSSFLIF  186 (191)
Q Consensus       161 ~~~~~~~~~~~~~p~~~i~iGDs~~~  186 (191)
                      .--.++.+.++-.-+=|.|-||+.||
T Consensus       664 ~HK~kIVeaLq~~geivAMTGDGVND  689 (972)
T KOG0202|consen  664 QHKLKIVEALQSRGEVVAMTGDGVND  689 (972)
T ss_pred             hhHHHHHHHHHhcCCEEEecCCCccc
Confidence            55566666667677889999999998

>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []

Probab=96.28  E-value=0.025  Score=38.92  Aligned_cols=14  Identities=36%  Similarity=0.534  Sum_probs=12.6

Q ss_pred             EEEEecCCCCCCCh
Q 029593            7 CLVFDLDDTLYPSE   20 (191)
Q Consensus         7 ~iifD~DGTL~~~~   20 (191)
                      .|++|+||||+.++
T Consensus         1 VVvsDIDGTiT~SD   14 (157)
T PF08235_consen    1 VVVSDIDGTITKSD   14 (157)
T ss_pred             CEEEeccCCcCccc
Confidence            48999999999987

SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].

>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A

Probab=96.21  E-value=0.024  Score=36.07  Aligned_cols=49  Identities=27%  Similarity=0.252  Sum_probs=34.9

Q ss_pred             CCCChhHHHHHHhhccCcE---EEecCCh---HHHHHHHhhcCCCcccceeeecc
Q 029593           89 IKPDPQLRNLLCSITQRKI---IFTNSDR---NHAITCLKRLEIADCFDQIICFE  137 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~---~~~~~~l~~~~l~~~f~~i~~~~  137 (191)
                      ..+.||+.++++.|+++|.   ++||++.   ......++.+|+.---+.++++.
T Consensus        13 ~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~~~~~i~ts~   67 (101)
T PF13344_consen   13 NEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPVDEDEIITSG   67 (101)
T ss_dssp             TEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT--GGGEEEHH
T ss_pred             CCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCCCcCEEEChH
Confidence            4689999999999999986   9999764   34555668888876566677653

...

>PLN02645 phosphoglycolate phosphatase

Probab=96.16  E-value=0.02  Score=44.17  Aligned_cols=48  Identities=13%  Similarity=0.015  Sum_probs=36.4

Q ss_pred             CCChhHHHHHHhhccCcE---EEecCCh---HHHHHHHhhcCCCcccceeeecc
Q 029593           90 KPDPQLRNLLCSITQRKI---IFTNSDR---NHAITCLKRLEIADCFDQIICFE  137 (191)
Q Consensus        90 ~~~~~~~~~l~~l~~~g~---i~t~~~~---~~~~~~l~~~~l~~~f~~i~~~~  137 (191)
                      .++|++.++++.|+++|+   ++||++.   ......++.+|+....+.++++.
T Consensus        44 ~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~~~~~~I~ts~   97 (311)
T PLN02645         44 KLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLNVTEEEIFSSS   97 (311)
T ss_pred             ccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCCCChhhEeehH
Confidence            567999999999999887   9999773   34444567788876677776643

>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245

Probab=96.15  E-value=0.019  Score=41.07  Aligned_cols=39  Identities=18%  Similarity=0.219  Sum_probs=32.4

Q ss_pred             CCCChhHHHHHHhhccC-cE-EEecCChHHHHHHHhhcCCC
Q 029593           89 IKPDPQLRNLLCSITQR-KI-IFTNSDRNHAITCLKRLEIA  127 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~-g~-i~t~~~~~~~~~~l~~~~l~  127 (191)
                      ....|++.++|+.+.+. .+ |-|.+...++..+++.+++.
T Consensus        44 ~~kRP~l~eFL~~~~~~feIvVwTAa~~~ya~~~l~~l~~~   84 (195)
T TIGR02245        44 ELMRPYLHEFLTSAYEDYDIVIWSATSMKWIEIKMTELGVL   84 (195)
T ss_pred             EEeCCCHHHHHHHHHhCCEEEEEecCCHHHHHHHHHHhccc
Confidence            35789999999999885 34 89999999999999988763

This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.

>COG4030 Uncharacterized protein conserved in archaea [Function unknown]

Probab=96.14  E-value=0.23  Score=36.27  Aligned_cols=38  Identities=11%  Similarity=0.185  Sum_probs=31.8

Q ss_pred             CCCChhHHHHHHhhccC--cEEEecCChHHHHHHHhhcCC
Q 029593           89 IKPDPQLRNLLCSITQR--KIIFTNSDRNHAITCLKRLEI  126 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~--g~i~t~~~~~~~~~~l~~~~l  126 (191)
                      .++.||+.+.+..|.+.  .+|+|.+...+++.....+|+
T Consensus        82 a~lvPgA~etm~~l~~~~tp~v~STSY~qy~~r~a~~ig~  121 (315)
T COG4030          82 AKLVPGAEETMATLQERWTPVVISTSYTQYLRRTASMIGV  121 (315)
T ss_pred             cccCCChHHHHHHHhccCCceEEeccHHHHHHHHHHhcCC
Confidence            68899999999999885  348888888888888887766

>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit

Probab=96.06  E-value=0.022  Score=50.79  Aligned_cols=38  Identities=16%  Similarity=0.153  Sum_probs=34.5

Q ss_pred             CCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCC
Q 029593           90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIA  127 (191)
Q Consensus        90 ~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~  127 (191)
                      ++.|++.+.++.++++|+   ++|+.+...+..+.+.+|+.
T Consensus       568 plr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~  608 (997)
T TIGR01106       568 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGII  608 (997)
T ss_pred             CChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCC
Confidence            678999999999999998   88888888999999999884

Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.

>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC

Probab=96.02  E-value=0.02  Score=47.06  Aligned_cols=72  Identities=10%  Similarity=0.015  Sum_probs=52.8

Q ss_pred             CCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q 029593           89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKL  165 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~  165 (191)
                      -++.+++.+.+..|++.|+   ++|+.+...+....+.+|+       ++                     .-.|.--..
T Consensus       346 d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi-------~~---------------------~~~p~~K~~  397 (499)
T TIGR01494       346 DPLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKELGI-------FA---------------------RVTPEEKAA  397 (499)
T ss_pred             CCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc-------ee---------------------ccCHHHHHH
Confidence            3788999999999999987   8999889899999999886       11                     111333334


Q ss_pred             HHHHcCCCCCceEEecCcccccc
Q 029593          166 ALHVANVDPRHAVRQSSFLIFYF  188 (191)
Q Consensus       166 ~~~~~~~~p~~~i~iGDs~~~~~  188 (191)
                      +.+.++-....+.|+||+.||-.
T Consensus       398 ~v~~l~~~g~~v~~vGDg~nD~~  420 (499)
T TIGR01494       398 LVEALQKKGRVVAMTGDGVNDAP  420 (499)
T ss_pred             HHHHHHHCCCEEEEECCChhhHH
Confidence            44444333478999999999953

The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.

>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase

Probab=95.82  E-value=0.006  Score=40.43  Aligned_cols=15  Identities=47%  Similarity=0.654  Sum_probs=13.1

Q ss_pred             eEEEEecCCCCCCCh
Q 029593            6 NCLVFDLDDTLYPSE   20 (191)
Q Consensus         6 k~iifD~DGTL~~~~   20 (191)
                      |+|+||+||||...+
T Consensus         2 K~i~~DiDGTL~~~~   16 (126)
T TIGR01689         2 KRLVMDLDNTITLTE   16 (126)
T ss_pred             CEEEEeCCCCcccCC
Confidence            799999999998753

Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.

>PLN02499 glycerol-3-phosphate acyltransferase

Probab=95.60  E-value=0.12  Score=42.13  Aligned_cols=31  Identities=13%  Similarity=0.036  Sum_probs=22.2

Q ss_pred             HHHhhccCcE--EEecCChHHHHHHHhh-cCCCc
Q 029593           98 LLCSITQRKI--IFTNSDRNHAITCLKR-LEIAD  128 (191)
Q Consensus        98 ~l~~l~~~g~--i~t~~~~~~~~~~l~~-~~l~~  128 (191)
                      .++..++.|.  ++|.+++-+++.+++. +|.+.
T Consensus       101 ~~~~~~~~g~~vVVTAsPrvmVEpFake~LG~D~  134 (498)
T PLN02499        101 AWKVFSSCDKRVVVTRMPRVMVERFAKEHLRADE  134 (498)
T ss_pred             HHHHHHcCCeEEEEeCCHHHHHHHHHHHhcCCce
Confidence            3344444555  8888899999999988 77743

>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family

Probab=95.60  E-value=0.05  Score=41.22  Aligned_cols=47  Identities=17%  Similarity=0.170  Sum_probs=33.6

Q ss_pred             CCChhHHHHHHhhccCcE---EEecCCh---HHHHHHHhhcCCCcccceeeec
Q 029593           90 KPDPQLRNLLCSITQRKI---IFTNSDR---NHAITCLKRLEIADCFDQIICF  136 (191)
Q Consensus        90 ~~~~~~~~~l~~l~~~g~---i~t~~~~---~~~~~~l~~~~l~~~f~~i~~~  136 (191)
                      .++|++.++++.|+++|+   ++||++.   ......++.+|+....+.++++
T Consensus        18 ~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~~~~~i~ts   70 (279)
T TIGR01452        18 RVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNGLAEQLFSS   70 (279)
T ss_pred             eeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEecH
Confidence            467889999999999886   8888653   3344567788886555555553

This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.

>PLN02382 probable sucrose-phosphatase

Probab=95.24  E-value=0.017  Score=46.35  Aligned_cols=31  Identities=10%  Similarity=-0.124  Sum_probs=28.4

Q ss_pred             CCCHHHHHHHHHHc---CCCCCceEEecCccccc
Q 029593          157 KPSMDAMKLALHVA---NVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       157 kp~~~~~~~~~~~~---~~~p~~~i~iGDs~~~~  187 (191)
                      -.|..+++.+++++   |+++++++++|||.||.
T Consensus       174 ~sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDl  207 (413)
T PLN02382        174 AGKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDA  207 (413)
T ss_pred             CCHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHH
Confidence            45689999999999   99999999999999984

>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional

Probab=95.09  E-value=0.011  Score=41.80  Aligned_cols=16  Identities=19%  Similarity=0.341  Sum_probs=14.8

Q ss_pred             CceEEEEecCCCCCCC
Q 029593            4 PFNCLVFDLDDTLYPS   19 (191)
Q Consensus         4 ~~k~iifD~DGTL~~~   19 (191)
                      ++|+|+||+||||++.
T Consensus        20 ~ikli~~D~Dgtl~~~   35 (183)
T PRK09484         20 NIRLLICDVDGVFSDG   35 (183)
T ss_pred             CceEEEEcCCeeeecC
Confidence            4899999999999986

>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V)

Probab=95.09  E-value=0.079  Score=47.64  Aligned_cols=39  Identities=13%  Similarity=0.295  Sum_probs=35.4

Q ss_pred             CCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCc
Q 029593           90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIAD  128 (191)
Q Consensus        90 ~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~  128 (191)
                      ++.|++.++++.|+++|+   ++|+.+...+..+.+..|+..
T Consensus       656 ~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gii~  697 (1054)
T TIGR01657       656 PLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIVN  697 (1054)
T ss_pred             CCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC
Confidence            688999999999999998   899988999999999999853

These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.

>TIGR00685 T6PP trehalose-phosphatase

Probab=94.83  E-value=0.029  Score=41.65  Aligned_cols=29  Identities=10%  Similarity=-0.173  Sum_probs=27.1

Q ss_pred             CHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          159 SMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       159 ~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      |..+++.+++.++..++++++|||+.||.
T Consensus       168 Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~  196 (244)
T TIGR00685       168 KGEIVKRLLWHQPGSGISPVYLGDDITDE  196 (244)
T ss_pred             HHHHHHHHHHhcccCCCceEEEcCCCcHH
Confidence            46999999999999999999999999985

At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.

>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A

Probab=94.80  E-value=0.0097  Score=37.87  Aligned_cols=19  Identities=42%  Similarity=0.737  Sum_probs=15.2

Q ss_pred             EEEecCCCCCCChHHHHHH
Q 029593            8 LVFDLDDTLYPSETGIAAA   26 (191)
Q Consensus         8 iifD~DGTL~~~~~~~~~~   26 (191)
                      ++||+||||+.....++.+
T Consensus         1 ~l~D~dGvl~~g~~~ipga   19 (101)
T PF13344_consen    1 FLFDLDGVLYNGNEPIPGA   19 (101)
T ss_dssp             EEEESTTTSEETTEE-TTH
T ss_pred             CEEeCccEeEeCCCcCcCH
Confidence            6899999999988766644

...

>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB

Probab=94.75  E-value=0.019  Score=41.26  Aligned_cols=27  Identities=30%  Similarity=0.454  Sum_probs=18.8

Q ss_pred             EEEEecCCCCCCCh-HHHHHHHHHHHHH
Q 029593            7 CLVFDLDDTLYPSE-TGIAAAVKRNIEG   33 (191)
Q Consensus         7 ~iifD~DGTL~~~~-~~~~~~~~~~~~~   33 (191)
                      +++||+||||++.+ ..+.....+++.+
T Consensus         1 li~~D~DgTL~~~~~~~~~~~~~~~l~~   28 (204)
T TIGR01484         1 LLFFDLDGTLLDPNAHELSPETIEALER   28 (204)
T ss_pred             CEEEeCcCCCcCCCCCcCCHHHHHHHHH
Confidence            47999999999876 3444455555554

The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.

>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear

Probab=94.40  E-value=0.02  Score=39.42  Aligned_cols=82  Identities=16%  Similarity=0.167  Sum_probs=55.1

Q ss_pred             CCCChhHHHHHHhhccC-cE-EEecCChHHHHHHHhhcCC-CcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q 029593           89 IKPDPQLRNLLCSITQR-KI-IFTNSDRNHAITCLKRLEI-ADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKL  165 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~-g~-i~t~~~~~~~~~~l~~~~l-~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~  165 (191)
                      +...|++.++|+.+.+. .+ +.|.+...++..+++.+.- ...|+.++..+.....             .+.  .  .+
T Consensus        35 v~~RP~l~~FL~~l~~~~ev~i~T~~~~~ya~~v~~~ldp~~~~~~~~~~r~~~~~~-------------~~~--~--~K   97 (159)
T PF03031_consen   35 VKLRPGLDEFLEELSKHYEVVIWTSASEEYAEPVLDALDPNGKLFSRRLYRDDCTFD-------------KGS--Y--IK   97 (159)
T ss_dssp             EEE-TTHHHHHHHHHHHCEEEEE-SS-HHHHHHHHHHHTTTTSSEEEEEEGGGSEEE-------------TTE--E--E-
T ss_pred             EeeCchHHHHHHHHHHhceEEEEEeehhhhhhHHHHhhhhhcccccccccccccccc-------------ccc--c--cc
Confidence            56789999999999664 34 9999999999999999877 4678888876643210             011  1  14


Q ss_pred             HHHHcCCCCCceEEecCccccc
Q 029593          166 ALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       166 ~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      -++.++-+++++++|.|++.-+
T Consensus        98 dL~~l~~~~~~vvivDD~~~~~  119 (159)
T PF03031_consen   98 DLSKLGRDLDNVVIVDDSPRKW  119 (159)
T ss_dssp             -GGGSSS-GGGEEEEES-GGGG
T ss_pred             chHHHhhccccEEEEeCCHHHe
Confidence            4555577889999999998754

It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....

>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]

Probab=94.34  E-value=0.12  Score=38.86  Aligned_cols=51  Identities=14%  Similarity=0.040  Sum_probs=38.0

Q ss_pred             CCCCCChhHHHHHHhhccCcE---EEecCChHH---HHHHHhh-cCCCcccceeeecc
Q 029593           87 DLIKPDPQLRNLLCSITQRKI---IFTNSDRNH---AITCLKR-LEIADCFDQIICFE  137 (191)
Q Consensus        87 ~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~---~~~~l~~-~~l~~~f~~i~~~~  137 (191)
                      ....++||+.++|+.|+++|+   ++||++...   ....++. .+++...+.++++.
T Consensus        21 ~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~~~~~~~~~~~i~TS~   78 (269)
T COG0647          21 RGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSSLGGVDVTPDDIVTSG   78 (269)
T ss_pred             eCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHhhcCCCCCHHHeecHH
Confidence            447899999999999999987   999976543   4455555 56656667777654

>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit

Probab=94.29  E-value=0.023  Score=39.70  Aligned_cols=17  Identities=12%  Similarity=0.366  Sum_probs=15.5

Q ss_pred             CceEEEEecCCCCCCCh
Q 029593            4 PFNCLVFDLDDTLYPSE   20 (191)
Q Consensus         4 ~~k~iifD~DGTL~~~~   20 (191)
                      .+|+++||+||||.|..
T Consensus         6 ~i~~~v~d~dGv~tdg~   22 (169)
T TIGR02726         6 NIKLVILDVDGVMTDGR   22 (169)
T ss_pred             cCeEEEEeCceeeECCe
Confidence            58999999999999974

Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.

>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]

Probab=93.87  E-value=0.033  Score=38.02  Aligned_cols=17  Identities=24%  Similarity=0.448  Sum_probs=15.6

Q ss_pred             CceEEEEecCCCCCCCh
Q 029593            4 PFNCLVFDLDDTLYPSE   20 (191)
Q Consensus         4 ~~k~iifD~DGTL~~~~   20 (191)
                      ++|.++||+||||+|..
T Consensus         7 ~IkLli~DVDGvLTDG~   23 (170)
T COG1778           7 NIKLLILDVDGVLTDGK   23 (170)
T ss_pred             hceEEEEeccceeecCe
Confidence            68999999999999974

>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]

Probab=93.69  E-value=0.16  Score=41.45  Aligned_cols=72  Identities=10%  Similarity=0.106  Sum_probs=54.9

Q ss_pred             CCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q 029593           90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLA  166 (191)
Q Consensus        90 ~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~  166 (191)
                      .+.||++|=+.+||+-|+   .+|+-++-.+..+.+..|+++++..                       .+|  +--..+
T Consensus       447 ivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVDdfiAe-----------------------atP--EdK~~~  501 (681)
T COG2216         447 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDDFIAE-----------------------ATP--EDKLAL  501 (681)
T ss_pred             hcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCchhhhhc-----------------------CCh--HHHHHH
Confidence            467999999999999998   7777777778888888888654321                       144  444455


Q ss_pred             HHHcCCCCCceEEecCcccc
Q 029593          167 LHVANVDPRHAVRQSSFLIF  186 (191)
Q Consensus       167 ~~~~~~~p~~~i~iGDs~~~  186 (191)
                      .++.+-+-.-+.|.||+-||
T Consensus       502 I~~eQ~~grlVAMtGDGTND  521 (681)
T COG2216         502 IRQEQAEGRLVAMTGDGTND  521 (681)
T ss_pred             HHHHHhcCcEEEEcCCCCCc
Confidence            56667777889999999998

>KOG2470 consensus Similar to IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]

Probab=93.41  E-value=0.1  Score=40.43  Aligned_cols=95  Identities=21%  Similarity=0.225  Sum_probs=57.7

Q ss_pred             CCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhc---CCCcccceeeecccCCCCCCCCCC-C------------
Q 029593           89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRL---EIADCFDQIICFETMNPNLSKATR-P------------  149 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~---~l~~~f~~i~~~~~~~~~~~~~~~-~------------  149 (191)
                      +.-.|....+++.|+++|.   ++||++...+...+..+   ...++||.++.-.. .+.-|+... |            
T Consensus       239 i~r~~ql~~fl~kL~~~GKklFLiTNSPysFVd~GM~flvG~~WRdlFDVVIvqA~-KP~Fftde~rPfR~~dek~~sl~  317 (510)
T KOG2470|consen  239 IERNPQLLAFLRKLKDHGKKLFLITNSPYSFVDKGMRFLVGDDWRDLFDVVIVQAN-KPEFFTDERRPFRKYDEKRGSLL  317 (510)
T ss_pred             hhccHHHHHHHHHHHHhcCcEEEEeCCchhhhhcCceeeeCccHHhhhheeEEecC-CCcccccccCcchhhcccccchh
Confidence            4556788899999999886   99999999887777665   23356777554221 111121110 0            


Q ss_pred             ---CCCCCCCCC-CHHHHHHHHHHcCCCCCceEEecCcc
Q 029593          150 ---DEFPVLLKP-SMDAMKLALHVANVDPRHAVRQSSFL  184 (191)
Q Consensus       150 ---~~~~~~~kp-~~~~~~~~~~~~~~~p~~~i~iGDs~  184 (191)
                         ..--..+|- ....+...++.-+..-.+|+++||.+
T Consensus       318 wdkv~klekgkiYy~G~l~~flelt~WrG~~VlYFGDHl  356 (510)
T KOG2470|consen  318 WDKVDKLEKGKIYYQGNLKSFLELTGWRGPRVLYFGDHL  356 (510)
T ss_pred             hhhhhhcccCceeeeccHHHHHHHhccCCCeeEEecCcc
Confidence               000000010 12345667777888999999999986

>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear

Probab=93.00  E-value=0.038  Score=38.03  Aligned_cols=16  Identities=50%  Similarity=0.655  Sum_probs=13.1

Q ss_pred             eEEEEecCCCCCCChH
Q 029593            6 NCLVFDLDDTLYPSET   21 (191)
Q Consensus         6 k~iifD~DGTL~~~~~   21 (191)
                      |+++||+||||+.+..
T Consensus         1 k~LVlDLD~TLv~~~~   16 (159)
T PF03031_consen    1 KTLVLDLDGTLVHSSS   16 (159)
T ss_dssp             EEEEEE-CTTTEEEES
T ss_pred             CEEEEeCCCcEEEEee
Confidence            6899999999998764

It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....

>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase

Probab=92.25  E-value=0.45  Score=43.04  Aligned_cols=38  Identities=16%  Similarity=0.119  Sum_probs=33.5

Q ss_pred             CCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCC
Q 029593           90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIA  127 (191)
Q Consensus        90 ~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~  127 (191)
                      ++.+++.+.++.|+++|+   ++|+-+.+.+..+....|+-
T Consensus       631 ~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii  671 (1057)
T TIGR01652       631 KLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLL  671 (1057)
T ss_pred             hhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCC
Confidence            788999999999999998   99988888888888777764

This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.

>KOG3107 consensus Predicted haloacid dehalogenase-like hydrolase (eyes absent) [General function prediction only]

Probab=92.06  E-value=1.9  Score=33.96  Aligned_cols=57  Identities=7%  Similarity=-0.056  Sum_probs=37.5

Q ss_pred             EEecCChHHHHHHHhhcCCCc--ccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHcCCCCCceEEecCc
Q 029593          108 IFTNSDRNHAITCLKRLEIAD--CFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHAVRQSSF  183 (191)
Q Consensus       108 i~t~~~~~~~~~~l~~~~l~~--~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs  183 (191)
                      ++|+..---.-.++=.+|+..  .++.|+++...++                  ...|+++.+++|= .-.-++|||+
T Consensus       375 lvTttqLipalaKvLL~gLg~~fpiENIYSa~kiGK------------------escFerI~~RFg~-K~~yvvIgdG  433 (468)
T KOG3107|consen  375 LVTTTQLIPALAKVLLYGLGSSFPIENIYSATKIGK------------------ESCFERIQSRFGR-KVVYVVIGDG  433 (468)
T ss_pred             EEeccchhHHHHHHHHHhcCCcccchhhhhhhhccH------------------HHHHHHHHHHhCC-ceEEEEecCc
Confidence            777765433333333334443  4566777666543                  5899999999998 5677889998

>COG3700 AphA Acid phosphatase (class B) [General function prediction only]

Probab=91.70  E-value=0.38  Score=33.78  Aligned_cols=75  Identities=16%  Similarity=0.081  Sum_probs=43.7

Q ss_pred             CCChhHHHHHHhhccCcE---EEecCChHHHHH----HHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHH
Q 029593           90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAIT----CLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDA  162 (191)
Q Consensus        90 ~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~----~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~  162 (191)
                      .|..-++.++..-.++|-   .+|+...-.+..    ..+.+.+.+....++.++                   ||+|.-
T Consensus       114 IPKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~m~pv~f~Gd-------------------k~k~~q  174 (237)
T COG3700         114 IPKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHITNMNPVIFAGD-------------------KPKPGQ  174 (237)
T ss_pred             chHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccCCCcceeeccC-------------------CCCccc
Confidence            345566777777777774   777766543333    334456666555666655                   444433


Q ss_pred             HH--HHHHHcCCCCCceEEecCccccc
Q 029593          163 MK--LALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       163 ~~--~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      +.  ..++.-++    -|+.|||-||-
T Consensus       175 y~Kt~~i~~~~~----~IhYGDSD~Di  197 (237)
T COG3700         175 YTKTQWIQDKNI----RIHYGDSDNDI  197 (237)
T ss_pred             ccccHHHHhcCc----eEEecCCchhh
Confidence            32  23333343    47899998873

>COG5610 Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=91.46  E-value=0.84  Score=36.90  Aligned_cols=80  Identities=16%  Similarity=0.115  Sum_probs=56.5

Q ss_pred             CChhHHHHHHhhccCcE---EEecC--ChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q 029593           91 PDPQLRNLLCSITQRKI---IFTNS--DRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKL  165 (191)
Q Consensus        91 ~~~~~~~~l~~l~~~g~---i~t~~--~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~  165 (191)
                      +.....++++.+.+++.   ++|..  +.+-++..+...|.+-.-=.++.+.+..-              .|.+...+..
T Consensus       100 pn~~~~eL~e~ai~n~krVIlISDMYlps~Il~~~L~s~g~d~~nipiY~S~e~rl--------------~KnSg~LFk~  165 (635)
T COG5610         100 PNKKNIELVEEAIKNEKRVILISDMYLPSSILRTFLNSFGPDFNNIPIYMSSEFRL--------------KKNSGNLFKA  165 (635)
T ss_pred             ccccchHHHHHHHhCCCeEEEEecccCcHHHHHHHHHhcCCCccCceeeecceeeh--------------hcccchHHHH
Confidence            33455678888888765   77775  45567788887776432222333333222              3888999999


Q ss_pred             HHHHcCCCCCceEEecCcc
Q 029593          166 ALHVANVDPRHAVRQSSFL  184 (191)
Q Consensus       166 ~~~~~~~~p~~~i~iGDs~  184 (191)
                      +++..+++|.+.++|||+.
T Consensus       166 Vlk~EnVd~~~w~H~GDN~  184 (635)
T COG5610         166 VLKLENVDPKKWIHCGDNW  184 (635)
T ss_pred             HHhhcCCChhheEEecCch
Confidence            9999999999999999974

>TIGR00685 T6PP trehalose-phosphatase

Probab=91.26  E-value=0.13  Score=38.16  Aligned_cols=16  Identities=31%  Similarity=0.366  Sum_probs=13.7

Q ss_pred             CceEEEEecCCCCCCC
Q 029593            4 PFNCLVFDLDDTLYPS   19 (191)
Q Consensus         4 ~~k~iifD~DGTL~~~   19 (191)
                      +..+++||+||||++.
T Consensus         2 ~~~~l~lD~DGTL~~~   17 (244)
T TIGR00685         2 RKRAFFFDYDGTLSEI   17 (244)
T ss_pred             CcEEEEEecCccccCC
Confidence            3578999999999985

At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.

>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457

Probab=90.27  E-value=0.4  Score=35.72  Aligned_cols=48  Identities=15%  Similarity=0.313  Sum_probs=37.1

Q ss_pred             CCChhHHHHHHhhccCcE---EEec---CChHHHHHHHhhcCCCcccceeeecc
Q 029593           90 KPDPQLRNLLCSITQRKI---IFTN---SDRNHAITCLKRLEIADCFDQIICFE  137 (191)
Q Consensus        90 ~~~~~~~~~l~~l~~~g~---i~t~---~~~~~~~~~l~~~~l~~~f~~i~~~~  137 (191)
                      .+.|++.+++..|+++|+   ++||   .+.......++.+|+....+.++++.
T Consensus        17 ~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~~~~iit~~   70 (249)
T TIGR01457        17 ERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPATLETVFTAS   70 (249)
T ss_pred             eeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEeeHH
Confidence            456788999999999987   8887   34666778888899877667777653

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.

>PRK10444 UMP phosphatase; Provisional

Probab=90.10  E-value=1.2  Score=33.16  Aligned_cols=96  Identities=11%  Similarity=0.031  Sum_probs=53.6

Q ss_pred             CCChhHHHHHHhhccCcE---EEecCChHH---HHHHHhhcCCCcccceeeecccCCCCCCCCCC-CCCCCCCCCCCHHH
Q 029593           90 KPDPQLRNLLCSITQRKI---IFTNSDRNH---AITCLKRLEIADCFDQIICFETMNPNLSKATR-PDEFPVLLKPSMDA  162 (191)
Q Consensus        90 ~~~~~~~~~l~~l~~~g~---i~t~~~~~~---~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~-~~~~~~~~kp~~~~  162 (191)
                      .+.|++.+++..|+++|+   ++||+....   ....++.+|+.---+.++++...-.. +.... ....-+.+.   ..
T Consensus        17 ~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~~~~~~i~ts~~~~~~-~L~~~~~~~v~~~g~---~~   92 (248)
T PRK10444         17 VAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVDVPDSVFYTSAMATAD-FLRRQEGKKAYVIGE---GA   92 (248)
T ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCHhhEecHHHHHHH-HHHhCCCCEEEEEcC---HH
Confidence            568999999999999887   899977643   44455667775444555554211000 00000 000001112   34


Q ss_pred             HHHHHHHcCCC----CCceEEecCccccccc
Q 029593          163 MKLALHVANVD----PRHAVRQSSFLIFYFD  189 (191)
Q Consensus       163 ~~~~~~~~~~~----p~~~i~iGDs~~~~~~  189 (191)
                      +...++..|+.    ..+++++|...++.|.
T Consensus        93 l~~~l~~~g~~~~~~~~~~Vvvg~~~~~~~~  123 (248)
T PRK10444         93 LIHELYKAGFTITDINPDFVIVGETRSYNWD  123 (248)
T ss_pred             HHHHHHHCcCEecCCCCCEEEEeCCCCCCHH
Confidence            55555555543    3467889988876654

>COG4502 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism]

Probab=89.96  E-value=0.31  Score=32.74  Aligned_cols=50  Identities=12%  Similarity=0.150  Sum_probs=32.1

Q ss_pred             CCCCChhHHHHHHhhccC-cE-EEecC--ChHHHHHHHhh----cCCCcccceeeecc
Q 029593           88 LIKPDPQLRNLLCSITQR-KI-IFTNS--DRNHAITCLKR----LEIADCFDQIICFE  137 (191)
Q Consensus        88 ~~~~~~~~~~~l~~l~~~-g~-i~t~~--~~~~~~~~l~~----~~l~~~f~~i~~~~  137 (191)
                      .+.+.|++.+++++|.+. .+ |+|..  .....+.+.+.    +.+-++-..++|+.
T Consensus        66 nL~V~p~aq~v~keLt~~y~vYivtaamdhp~s~~dK~eWl~E~FPFi~~qn~vfCgn  123 (180)
T COG4502          66 NLGVQPFAQTVLKELTSIYNVYIVTAAMDHPKSCEDKGEWLKEKFPFISYQNIVFCGN  123 (180)
T ss_pred             hcCccccHHHHHHHHHhhheEEEEEeccCCchhHHHHHHHHHHHCCCCChhhEEEecC
Confidence            478899999999999774 45 77665  34444544443    44444555566654

>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458

Probab=88.91  E-value=0.39  Score=35.98  Aligned_cols=47  Identities=15%  Similarity=0.210  Sum_probs=35.0

Q ss_pred             CCChhHHHHHHhhccCcE---EEecCChH---HHHHHHhhcCCCcccceeeec
Q 029593           90 KPDPQLRNLLCSITQRKI---IFTNSDRN---HAITCLKRLEIADCFDQIICF  136 (191)
Q Consensus        90 ~~~~~~~~~l~~l~~~g~---i~t~~~~~---~~~~~l~~~~l~~~f~~i~~~  136 (191)
                      .+.|++.++++.|+++|+   ++||++..   .....++.+|+.--.+.++++
T Consensus        21 ~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~~~~~~i~ts   73 (257)
T TIGR01458        21 VAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFDISEDEVFTP   73 (257)
T ss_pred             CcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCCCCHHHeEcH
Confidence            378899999999999987   89986544   466677788876444555554

This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.

>TIGR01658 EYA-cons_domain eyes absent protein conserved domain

Probab=88.72  E-value=1.6  Score=32.33  Aligned_cols=59  Identities=7%  Similarity=0.010  Sum_probs=41.5

Q ss_pred             EEecCChHHHHHHHhhcCCCccc--ceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHcCCCCCceEEecCcc
Q 029593          108 IFTNSDRNHAITCLKRLEIADCF--DQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHAVRQSSFL  184 (191)
Q Consensus       108 i~t~~~~~~~~~~l~~~~l~~~f--~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~  184 (191)
                      ++|++.---.-.+.=.++++.+|  +.|+++..++                |  ...|+++.+++|-+...-++|||+.
T Consensus       180 LVTs~qLVPaLaKcLLy~L~~~f~ieNIYSa~kvG----------------K--~~cFe~I~~Rfg~p~~~f~~IGDG~  240 (274)
T TIGR01658       180 LVTSGQLIPSLAKCLLFRLDTIFRIENVYSSIKVG----------------K--LQCFKWIKERFGHPKVRFCAIGDGW  240 (274)
T ss_pred             EEEcCccHHHHHHHHHhccCCccccccccchhhcc----------------h--HHHHHHHHHHhCCCCceEEEeCCCh
Confidence            77776643333333345666555  4466666544                4  6999999999999889999999985

This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences.

>PLN03017 trehalose-phosphatase

Probab=88.69  E-value=0.35  Score=38.11  Aligned_cols=30  Identities=10%  Similarity=-0.110  Sum_probs=24.3

Q ss_pred             CCHHHHHHHHHHcCCCC---CceEEecCccccc
Q 029593          158 PSMDAMKLALHVANVDP---RHAVRQSSFLIFY  187 (191)
Q Consensus       158 p~~~~~~~~~~~~~~~p---~~~i~iGDs~~~~  187 (191)
                      .|..+++.+++.++...   .-.++|||...|=
T Consensus       283 dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDE  315 (366)
T PLN03017        283 DKGKALEFLLESLGFGNTNNVFPVYIGDDRTDE  315 (366)
T ss_pred             CHHHHHHHHHHhcccccCCCceEEEeCCCCccH
Confidence            46899999999988653   3589999998874

>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3

Probab=87.54  E-value=0.79  Score=37.27  Aligned_cols=42  Identities=21%  Similarity=0.336  Sum_probs=26.8

Q ss_pred             CCceEEEEecCCCCCCChH-HHHHHHHHHHHHHHHHHhCCCHH
Q 029593            3 SPFNCLVFDLDDTLYPSET-GIAAAVKRNIEGFLIEKCGFSET   44 (191)
Q Consensus         3 ~~~k~iifD~DGTL~~~~~-~~~~~~~~~~~~~~~~~~g~~~~   44 (191)
                      .++++|-||+|-||+.... .+..-..+...+++.++.|.|..
T Consensus        10 ~~i~~iGFDmDyTLa~Y~~~~~~~L~y~~~~~~LV~~~gYP~~   52 (448)
T PF05761_consen   10 KDIDVIGFDMDYTLARYKSPELEELIYELARERLVEEKGYPEE   52 (448)
T ss_dssp             CC--EEEE-TBTTTBEE-CCHHHHHHHHHHHHHHHHHTT--GG
T ss_pred             ccCCEEEECcccchhhcCHHHHHHHHHHHHHHHHHhccCCCHH
Confidence            3699999999999999876 55555555666667777888754

1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....

>PLN02423 phosphomannomutase

Probab=87.34  E-value=0.38  Score=35.74  Aligned_cols=27  Identities=4%  Similarity=-0.427  Sum_probs=23.0

Q ss_pred             CCCCHHHHHHHHHHcCCCCCceEEecC----ccccc
Q 029593          156 LKPSMDAMKLALHVANVDPRHAVRQSS----FLIFY  187 (191)
Q Consensus       156 ~kp~~~~~~~~~~~~~~~p~~~i~iGD----s~~~~  187 (191)
                      +-.|..+++.++     +++++++|||    +.||+
T Consensus       187 gvnKg~al~~L~-----~~~e~~aFGD~~~~~~ND~  217 (245)
T PLN02423        187 GWDKTYCLQFLE-----DFDEIHFFGDKTYEGGNDH  217 (245)
T ss_pred             CCCHHHHHHHhc-----CcCeEEEEeccCCCCCCcH
Confidence            456688888888     8999999999    79996

>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional

Probab=86.29  E-value=1.1  Score=39.32  Aligned_cols=27  Identities=15%  Similarity=0.022  Sum_probs=19.3

Q ss_pred             CCHHHHHHHHHHc------CCCCCceEEecCcc
Q 029593          158 PSMDAMKLALHVA------NVDPRHAVRQSSFL  184 (191)
Q Consensus       158 p~~~~~~~~~~~~------~~~p~~~i~iGDs~  184 (191)
                      .|..+.+.+++++      +-.++=++++||..
T Consensus       678 nKG~Av~~ll~~~~~~~~~~~~~dfvl~~Gdd~  710 (797)
T PLN03063        678 TKGAAIGRILGEIVHNKSMTTPIDFVFCSGYFL  710 (797)
T ss_pred             ChHHHHHHHHHHhhhccccCCCCCEEEEeCCCC
Confidence            4677888888766      23567788899853

>smart00577 CPDc catalytic domain of ctd-like phosphatases

Probab=86.14  E-value=0.5  Score=32.14  Aligned_cols=16  Identities=50%  Similarity=0.603  Sum_probs=14.1

Q ss_pred             ceEEEEecCCCCCCCh
Q 029593            5 FNCLVFDLDDTLYPSE   20 (191)
Q Consensus         5 ~k~iifD~DGTL~~~~   20 (191)
                      .+.+++|+||||+.+.
T Consensus         2 k~~lvldld~tl~~~~   17 (148)
T smart00577        2 KKTLVLDLDETLVHST   17 (148)
T ss_pred             CcEEEEeCCCCeECCC
Confidence            4689999999999985

>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional

Probab=85.54  E-value=0.49  Score=40.96  Aligned_cols=29  Identities=7%  Similarity=-0.223  Sum_probs=25.4

Q ss_pred             CCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          157 KPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       157 kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      -.|..+++.+++  +++++.++++||+.||-
T Consensus       656 vnKG~al~~ll~--~~~~d~vl~~GD~~nDe  684 (726)
T PRK14501        656 VNKGRAVRRLLE--AGPYDFVLAIGDDTTDE  684 (726)
T ss_pred             CCHHHHHHHHHh--cCCCCEEEEECCCCChH
Confidence            446899999998  78899999999999984

>PLN02151 trehalose-phosphatase

Probab=85.52  E-value=0.62  Score=36.60  Aligned_cols=30  Identities=7%  Similarity=-0.134  Sum_probs=23.6

Q ss_pred             CCHHHHHHHHHHcCCCCC---ceEEecCccccc
Q 029593          158 PSMDAMKLALHVANVDPR---HAVRQSSFLIFY  187 (191)
Q Consensus       158 p~~~~~~~~~~~~~~~p~---~~i~iGDs~~~~  187 (191)
                      .|..+++.+++.++..-.   -+++|||-..|=
T Consensus       269 dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDE  301 (354)
T PLN02151        269 DKGKALEFLLESLGYANCTDVFPIYIGDDRTDE  301 (354)
T ss_pred             CHHHHHHHHHHhcccccCCCCeEEEEcCCCcHH
Confidence            468999999999876532   389999988873

>KOG2469 consensus IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]

Probab=85.51  E-value=1.8  Score=34.47  Aligned_cols=94  Identities=15%  Similarity=0.034  Sum_probs=60.3

Q ss_pred             CCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhc---CCCcccceeeecccC-CC-----------------CCCC
Q 029593           90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRL---EIADCFDQIICFETM-NP-----------------NLSK  145 (191)
Q Consensus        90 ~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~---~l~~~f~~i~~~~~~-~~-----------------~~~~  145 (191)
                      ...+.+...+..+++.|.   +.||++..+.-....++   +...+|+.++..... ++                 ...+
T Consensus       198 ~~d~~~v~~l~~~r~sGKk~fl~Tns~~~ytd~~mt~~~~~dW~~yfd~v~~~a~Kp~ff~e~~vlreV~t~~g~l~~g~  277 (424)
T KOG2469|consen  198 VYDGTIVPLLSMLRDSGKKTFLHTNSDWDYTDIFMAFHYGFDWETYFDLVETRAAKPGFFHEGTVLREVEPQEGLLKNGD  277 (424)
T ss_pred             eecCccccchHHHHhhccceEEeeccccchhhHHHHHHhCCCcceeEEEEEEeccCCccccccceeeeeccccccccccc
Confidence            334445557888888875   99998887777666554   455678876654310 00                 0011


Q ss_pred             CCCCCCCCCCCCCCHHHHHHHHHHcCCCCCceEEecCccc
Q 029593          146 ATRPDEFPVLLKPSMDAMKLALHVANVDPRHAVRQSSFLI  185 (191)
Q Consensus       146 ~~~~~~~~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~  185 (191)
                      .+.|.  ...+.+++.....+++.++..-.+++++||.+-
T Consensus       278 ~~~p~--e~~~~ySggs~~~~~~~l~~~g~diLy~gdHi~  315 (424)
T KOG2469|consen  278 NTGPL--EQGGVYSGGSLKTVETSMKVKGKDILYGGDHIW  315 (424)
T ss_pred             cCCcc--hhcccCCcchHHHHHHHhcccccceeeccccee
Confidence            12222  223445567888899999999999999999863

>PTZ00174 phosphomannomutase; Provisional

Probab=85.48  E-value=0.67  Score=34.45  Aligned_cols=28  Identities=4%  Similarity=-0.365  Sum_probs=24.4

Q ss_pred             CCCCHHHHHHHHHHcCCCCCceEEecC----ccccc
Q 029593          156 LKPSMDAMKLALHVANVDPRHAVRQSS----FLIFY  187 (191)
Q Consensus       156 ~kp~~~~~~~~~~~~~~~p~~~i~iGD----s~~~~  187 (191)
                      +-.|..+++.+++.    ++++++|||    +.||.
T Consensus       186 gvsKg~al~~L~~~----~~eviafGD~~~~~~NDi  217 (247)
T PTZ00174        186 GWDKTYCLRHLEND----FKEIHFFGDKTFEGGNDY  217 (247)
T ss_pred             CCcHHHHHHHHHhh----hhhEEEEcccCCCCCCcH
Confidence            45568999999999    699999999    89985

>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain

Probab=85.34  E-value=0.57  Score=32.46  Aligned_cols=16  Identities=50%  Similarity=0.625  Sum_probs=13.9

Q ss_pred             eEEEEecCCCCCCChH
Q 029593            6 NCLVFDLDDTLYPSET   21 (191)
Q Consensus         6 k~iifD~DGTL~~~~~   21 (191)
                      +++++|+|+||+.+..
T Consensus         2 ~~lvlDLDeTLi~~~~   17 (162)
T TIGR02251         2 KTLVLDLDETLVHSTF   17 (162)
T ss_pred             cEEEEcCCCCcCCCCC
Confidence            5899999999998853

This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.

>PLN02580 trehalose-phosphatase

Probab=85.22  E-value=0.53  Score=37.40  Aligned_cols=31  Identities=6%  Similarity=-0.137  Sum_probs=26.0

Q ss_pred             CCCHHHHHHHHHHcCCCCCc---eEEecCccccc
Q 029593          157 KPSMDAMKLALHVANVDPRH---AVRQSSFLIFY  187 (191)
Q Consensus       157 kp~~~~~~~~~~~~~~~p~~---~i~iGDs~~~~  187 (191)
                      -.|..+++.+++.+++...+   .++|||..||-
T Consensus       300 ~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDe  333 (384)
T PLN02580        300 WNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDE  333 (384)
T ss_pred             CCHHHHHHHHHHhcCCCcccceeEEEECCCchHH
Confidence            35689999999999998763   38999999985

>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]

Probab=85.06  E-value=0.59  Score=35.19  Aligned_cols=30  Identities=17%  Similarity=0.042  Sum_probs=25.2

Q ss_pred             CCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          158 PSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       158 p~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      .|...++++++.......-+++.||...|-
T Consensus       182 ~KG~a~~~i~~~~~~~~~~~~~aGDD~TDE  211 (266)
T COG1877         182 SKGAAIKYIMDELPFDGRFPIFAGDDLTDE  211 (266)
T ss_pred             chHHHHHHHHhcCCCCCCcceecCCCCccH
Confidence            368889999998888778899999998874

>KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism]

Probab=84.71  E-value=0.81  Score=32.79  Aligned_cols=28  Identities=21%  Similarity=0.402  Sum_probs=20.1

Q ss_pred             eEEEEecCCCCCCChHHHHHHHHHHHHH
Q 029593            6 NCLVFDLDDTLYPSETGIAAAVKRNIEG   33 (191)
Q Consensus         6 k~iifD~DGTL~~~~~~~~~~~~~~~~~   33 (191)
                      -.++||+||||..........+...+.+
T Consensus        12 ~l~lfdvdgtLt~~r~~~~~e~~~~l~~   39 (252)
T KOG3189|consen   12 TLCLFDVDGTLTPPRQKVTPEMLEFLQK   39 (252)
T ss_pred             eEEEEecCCccccccccCCHHHHHHHHH
Confidence            4899999999999876555555554433

>PRK10513 sugar phosphate phosphatase; Provisional

Probab=84.37  E-value=2.9  Score=31.28  Aligned_cols=40  Identities=13%  Similarity=0.225  Sum_probs=33.7

Q ss_pred             CCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCc
Q 029593           89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIAD  128 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~  128 (191)
                      -.+.+..++++.+|+++|+   ++|+.+...+...++.+++..
T Consensus        19 ~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~   61 (270)
T PRK10513         19 HTISPAVKQAIAAARAKGVNVVLTTGRPYAGVHRYLKELHMEQ   61 (270)
T ss_pred             CccCHHHHHHHHHHHHCCCEEEEecCCChHHHHHHHHHhCCCC
Confidence            3567888999999999997   888888888888889888754

>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain

Probab=84.00  E-value=0.95  Score=31.19  Aligned_cols=18  Identities=39%  Similarity=0.403  Sum_probs=15.6

Q ss_pred             CceEEEEecCCCCCCChH
Q 029593            4 PFNCLVFDLDDTLYPSET   21 (191)
Q Consensus         4 ~~k~iifD~DGTL~~~~~   21 (191)
                      +..++++|+|.||+.+..
T Consensus         5 ~kl~LVLDLDeTLihs~~   22 (156)
T TIGR02250         5 KKLHLVLDLDQTLIHTTK   22 (156)
T ss_pred             CceEEEEeCCCCcccccc
Confidence            567999999999999864

This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.

>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=83.92  E-value=2.7  Score=31.67  Aligned_cols=41  Identities=17%  Similarity=0.150  Sum_probs=34.7

Q ss_pred             CCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCccc
Q 029593           90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCF  130 (191)
Q Consensus        90 ~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f  130 (191)
                      ...+.+++++..|+++|+   ++|+.+...+...++.+++..++
T Consensus        21 ~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~~~~   64 (273)
T PRK00192         21 YSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLEDPF   64 (273)
T ss_pred             cCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCE
Confidence            456789999999999987   88998888899999999886543

>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]

Probab=82.78  E-value=0.86  Score=40.20  Aligned_cols=32  Identities=9%  Similarity=-0.199  Sum_probs=26.5

Q ss_pred             CCCCHHHHHHHHHH---cCCCCCceEEecCccccc
Q 029593          156 LKPSMDAMKLALHV---ANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       156 ~kp~~~~~~~~~~~---~~~~p~~~i~iGDs~~~~  187 (191)
                      +-.|..+++.+++.   +|..|+.+++|||+.||-
T Consensus       760 gvnKG~Al~~Ll~~~~~~g~~~d~vl~~GDD~nDe  794 (854)
T PLN02205        760 GVSKGLVAKRLLSIMQERGMLPDFVLCIGDDRSDE  794 (854)
T ss_pred             CCCHHHHHHHHHHHHHhcCCCcccEEEEcCCccHH
Confidence            34568899998754   689999999999999984

>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]

Probab=82.46  E-value=2.6  Score=36.94  Aligned_cols=39  Identities=15%  Similarity=0.139  Sum_probs=35.5

Q ss_pred             CCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCc
Q 029593           90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIAD  128 (191)
Q Consensus        90 ~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~  128 (191)
                      +..||+++.++.++.+|+   .+|+.+...++.+....|+-.
T Consensus       647 PvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt  688 (1034)
T KOG0204|consen  647 PVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILT  688 (1034)
T ss_pred             CCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHccccc
Confidence            788999999999999998   999999999999999888854

>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional

Probab=81.99  E-value=1.3  Score=38.40  Aligned_cols=15  Identities=40%  Similarity=0.585  Sum_probs=10.3

Q ss_pred             CceEEEEecCCCCCC
Q 029593            4 PFNCLVFDLDDTLYP   18 (191)
Q Consensus         4 ~~k~iifD~DGTL~~   18 (191)
                      +.++|+||+||||++
T Consensus       491 ~~rLi~~D~DGTL~~  505 (726)
T PRK14501        491 SRRLLLLDYDGTLVP  505 (726)
T ss_pred             cceEEEEecCccccC
Confidence            356777777777776

>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA

Probab=81.84  E-value=8.8  Score=28.28  Aligned_cols=48  Identities=25%  Similarity=0.245  Sum_probs=33.5

Q ss_pred             CCCChhHHHHHHhhccCcE---EEecCC---hHHHHHHHhh-cCCCcccceeeec
Q 029593           89 IKPDPQLRNLLCSITQRKI---IFTNSD---RNHAITCLKR-LEIADCFDQIICF  136 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~---i~t~~~---~~~~~~~l~~-~~l~~~f~~i~~~  136 (191)
                      -.++|++.+.+..++++|+   ++||+.   .......+.. +|+.-..+.++++
T Consensus        13 ~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~~~~~~iits   67 (236)
T TIGR01460        13 HKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVDVSPDQIITS   67 (236)
T ss_pred             CccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCCCCHHHeeeH
Confidence            4578899999999998876   888765   3334444555 6776556666654

Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.

>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]

Probab=81.28  E-value=0.78  Score=36.83  Aligned_cols=18  Identities=28%  Similarity=0.344  Sum_probs=15.6

Q ss_pred             CceEEEEecCCCCCCChH
Q 029593            4 PFNCLVFDLDDTLYPSET   21 (191)
Q Consensus         4 ~~k~iifD~DGTL~~~~~   21 (191)
                      ..+.|++|+||||+.++.
T Consensus       374 n~kiVVsDiDGTITkSD~  391 (580)
T COG5083         374 NKKIVVSDIDGTITKSDA  391 (580)
T ss_pred             CCcEEEEecCCcEEehhh
Confidence            468999999999999874

>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal

Probab=81.10  E-value=3.3  Score=29.86  Aligned_cols=40  Identities=8%  Similarity=-0.011  Sum_probs=33.9

Q ss_pred             CCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCc
Q 029593           89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIAD  128 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~  128 (191)
                      -.+.+...+.+.+|+++|+   ++|+.+...++...+.+++..
T Consensus        17 ~~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~   59 (215)
T TIGR01487        17 RMISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSG   59 (215)
T ss_pred             cccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCC
Confidence            4577899999999999987   888888888888888888753

TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.

>PLN02382 probable sucrose-phosphatase

Probab=80.27  E-value=1.4  Score=35.49  Aligned_cols=28  Identities=14%  Similarity=0.030  Sum_probs=19.2

Q ss_pred             CCCCHHHHHHHHHHcCCC----CCceEEecCc
Q 029593          156 LKPSMDAMKLALHVANVD----PRHAVRQSSF  183 (191)
Q Consensus       156 ~kp~~~~~~~~~~~~~~~----p~~~i~iGDs  183 (191)
                      ..+.++++..+++++++-    |.++.-+.+.
T Consensus       245 ~~~~~~GI~~al~~f~l~~~~~~~~~~~~~~~  276 (413)
T PLN02382        245 TERCAAGIIQAIGHFNLGPNVSPRDVSDFLYG  276 (413)
T ss_pred             CCCCccHHHHHHHHhCCCCCCChhhccccccc
Confidence            356788899999998864    5566544443

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	191
3onn_A	263	Crystal Structure Of 5'-Nucleotidase Sdt1 From Sacc		1e-13
3nuq_A	282	Structure Of A Putative Nucleotide Phosphatase From		1e-13
3opx_A	263	Crystal Structure Of Pyrimidine 5 -Nucleotidase Sdt		8e-13

>pdb|3ONN|A Chain A, Crystal Structure Of 5'-Nucleotidase Sdt1 From Saccharomyces Cerevisiae Length = 263

Iteration: 1
 Score = 72.8 bits (177), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 47/128 (36%), Positives = 69/128 (53%), Gaps = 7/128 (5%)
Query: 10  FDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLRALGY 69
           FD+D+ LY S T I   ++++I  F       S   A  L    +K YG  + GL  + +
Sbjct: 35  FDIDNCLYKSSTRIHDLMQQSILRFFQTHLKLSPEDAHVLNNSYYKEYGLAIRGL-VMFH 93
Query: 70  DIGADDYHGFVHGRLPY-DLIKPDPQLRNLLCSITQ-----RKIIFTNSDRNHAITCLKR 123
            + A +Y+  V   LP  D++KPD  LRN+L  + Q     +  +FTN+ +NHAI CL+ 
Sbjct: 94  KVNALEYNRLVDDSLPLQDILKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRL 153
Query: 124 LEIADCFD 131
           L IAD FD
Sbjct: 154 LGIADLFD 161

>pdb|3NUQ|A Chain A, Structure Of A Putative Nucleotide Phosphatase From Saccharomyces Cerevisiae Length = 282

Iteration: 1
 Score = 72.4 bits (176), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 47/128 (36%), Positives = 69/128 (53%), Gaps = 7/128 (5%)
Query: 10  FDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLRALGY 69
           FD+D+ LY S T I   ++++I  F       S   A  L    +K YG  + GL  + +
Sbjct: 62  FDIDNCLYKSSTRIHDLMQQSILRFFQTHLKLSPEDAHVLNNSYYKEYGLAIRGL-VMFH 120
Query: 70  DIGADDYHGFVHGRLP-YDLIKPDPQLRNLLCSITQ-----RKIIFTNSDRNHAITCLKR 123
            + A +Y+  V   LP  D++KPD  LRN+L  + Q     +  +FTN+ +NHAI CL+ 
Sbjct: 121 KVNALEYNRLVDDSLPLQDILKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRL 180
Query: 124 LEIADCFD 131
           L IAD FD
Sbjct: 181 LGIADLFD 188

>pdb|3OPX|A Chain A, Crystal Structure Of Pyrimidine 5 -Nucleotidase Sdt1 From Saccharomyces Cerevisiae Complexed With Uridine 5'-Monophosphate Length = 263

Iteration: 1
 Score = 70.1 bits (170), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 46/128 (35%), Positives = 68/128 (53%), Gaps = 7/128 (5%)
Query: 10  FDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLRALGY 69
           F +D+ LY S T I   ++++I  F       S   A  L    +K YG  + GL  + +
Sbjct: 35  FAIDNCLYKSSTRIHDLMQQSILRFFQTHLKLSPEDAHVLNNSYYKEYGLAIRGL-VMFH 93
Query: 70  DIGADDYHGFVHGRLPY-DLIKPDPQLRNLLCSITQ-----RKIIFTNSDRNHAITCLKR 123
            + A +Y+  V   LP  D++KPD  LRN+L  + Q     +  +FTN+ +NHAI CL+ 
Sbjct: 94  KVNALEYNRLVDDSLPLQDILKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRL 153
Query: 124 LEIADCFD 131
           L IAD FD
Sbjct: 154 LGIADLFD 161

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	191
3nuq_A	282	Protein SSM1, putative nucleotide phosphatase; sup	2e-25
2hoq_A	241	Putative HAD-hydrolase PH1655; haloacid dehalogena	3e-11
2pke_A	251	Haloacid delahogenase-like family hydrolase; NP_63	7e-11
2gfh_A	260	Haloacid dehalogenase-like hydrolase domain conta;	2e-08
3ed5_A	238	YFNB; APC60080, bacillus subtilis subsp. subtilis	2e-06
3kzx_A	231	HAD-superfamily hydrolase, subfamily IA, variant;	6e-06
2om6_A	235	Probable phosphoserine phosphatase; rossmann fold,	1e-05
1qyi_A	384	ZR25, hypothetical protein; structural genomics, P	1e-05
3s6j_A	233	Hydrolase, haloacid dehalogenase-like family; stru	1e-05
3u26_A	234	PF00702 domain protein; structural genomics, PSI-b	2e-05
3ddh_A	234	Putative haloacid dehalogenase-like family hydrol;	2e-05
3mc1_A	226	Predicted phosphatase, HAD family; PSI2, NYSGXRC,	2e-05
3qnm_A	240	Haloacid dehalogenase-like hydrolase; structural g	4e-05
3d6j_A	225	Putative haloacid dehalogenase-like hydrolase; str	1e-04
2hdo_A	209	Phosphoglycolate phosphatase; NP_784602.1, structu	1e-04
2nyv_A	222	Pgpase, PGP, phosphoglycolate phosphatase; structu	2e-04
2pib_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	4e-04
2pr7_A	137	Haloacid dehalogenase/epoxide hydrolase family; NP	7e-04

>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* Length = 282

 Score = 98.3 bits (244), Expect = 2e-25
 Identities = 51/183 (27%), Positives = 83/183 (45%), Gaps = 17/183 (9%)

Query: 2   DSPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTL 61
           +       FD+D+ LY S T I   ++++I  F       S   A  L    +K YG  +
Sbjct: 54  NPNLKVFFFDIDNCLYKSSTRIHDLMQQSILRFFQTHLKLSPEDAHVLNNSYYKEYGLAI 113

Query: 62  AGLRALGYDIGADDYHGFVHGRLPY-DLIKPDPQLRNLLCSITQ-----RKIIFTNSDRN 115
            GL    + + A +Y+  V   LP  D++KPD  LRN+L  + Q     +  +FTN+ +N
Sbjct: 114 RGLVM-FHKVNALEYNRLVDDSLPLQDILKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKN 172

Query: 116 HAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPR 175
           HAI CL+ L IAD FD +   +    +           ++ KP + A + A+  + +   
Sbjct: 173 HAIRCLRLLGIADLFDGLTYCDYSRTD----------TLVCKPHVKAFEKAMKESGLARY 222

Query: 176 HAV 178
              
Sbjct: 223 ENA 225

>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} Length = 241

 Score = 59.4 bits (144), Expect = 3e-11
 Identities = 42/186 (22%), Positives = 60/186 (32%), Gaps = 34/186 (18%)

Query: 8   LVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTL------ 61
           + FDLDDTL  +      A K  IE  +          A S  +EL K YGS        
Sbjct: 5   IFFDLDDTLVDTSKLAEIARKNAIENMIRHGLPVDFETAYSELIELIKEYGSNFPYHFDY 64

Query: 62  ------AGLRALGYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNS 112
                           G   YH        +  ++  P  R +L  + +      I T+ 
Sbjct: 65  LLRRLDLPYNPKWISAGVIAYH-----NTKFAYLREVPGARKVLIRLKELGYELGIITDG 119

Query: 113 DRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANV 172
           +       + RLE+ D F+ +I  +                   KP     K AL   NV
Sbjct: 120 NPVKQWEKILRLELDDFFEHVIISDFEGVK--------------KPHPKIFKKALKAFNV 165

Query: 173 DPRHAV 178
            P  A+
Sbjct: 166 KPEEAL 171

>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} Length = 251

 Score = 58.5 bits (141), Expect = 7e-11
 Identities = 25/188 (13%), Positives = 53/188 (28%), Gaps = 37/188 (19%)

Query: 8   LVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASS----LRVELFKAYGSTLAG 63
           + FD DDTL+ SE     A     E  L       +++       +     K +G    G
Sbjct: 16  VGFDGDDTLWKSEDYYRTAEAD-FEAILSGYLDLGDSRMQQHLLAVERRNLKIFGYGAKG 74

Query: 64  LRALGYDIGADDYHGFVHGRLPYDL-----------IKPDPQLRNLLCSITQ--RKIIFT 110
           +     +   +     +  R    +           ++    +R  + +I      ++ T
Sbjct: 75  MTLSMIETAIELTEARIEARDIQRIVEIGRATLQHPVEVIAGVREAVAAIAADYAVVLIT 134

Query: 111 NSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVA 170
             D  H    +++  ++D F +I                       +         L   
Sbjct: 135 KGDLFHQEQKIEQSGLSDLFPRIEVVS-------------------EKDPQTYARVLSEF 175

Query: 171 NVDPRHAV 178
           ++     V
Sbjct: 176 DLPAERFV 183

>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A Length = 260

 Score = 51.7 bits (124), Expect = 2e-08
 Identities = 28/193 (14%), Positives = 55/193 (28%), Gaps = 38/193 (19%)

Query: 8   LVFDLDDTLYPSETGIAAAVKRNIE------GFLIEKCGFSETKASSLRVELFKAYGSTL 61
           + FDLD+TL  +       +   I+       +  E     +     L  E F  Y + +
Sbjct: 21  VFFDLDNTLIDTAGASRRGMLEVIKLLQSKYHYKEEAEIICDKVQVKLSKECFHPYSTCI 80

Query: 62  AGLRAL--------------GYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQR-K 106
             +R                   +  + Y  +   R     +     ++ +L  + +  +
Sbjct: 81  TDVRTSHWEEAIQETKGGADNRKLAEECYFLWKSTR--LQHMILADDVKAMLTELRKEVR 138

Query: 107 I-IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKL 165
           + + TN DR      ++       FD I+                      KP+      
Sbjct: 139 LLLLTNGDRQTQREKIEACACQSYFDAIVIGGEQKEE--------------KPAPSIFYH 184

Query: 166 ALHVANVDPRHAV 178
              +  V P   V
Sbjct: 185 CCDLLGVQPGDCV 197

>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A Length = 238

 Score = 45.4 bits (108), Expect = 2e-06
 Identities = 25/149 (16%), Positives = 51/149 (34%), Gaps = 15/149 (10%)

Query: 3   SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGS--- 59
             +  L+FD+DDT+   +   A A++   E   I      + +  ++   L++A+     
Sbjct: 5   KRYRTLLFDVDDTILDFQAAEALALRLLFEDQNIPLTNDMKAQYKTINQGLWRAFEEGKM 64

Query: 60  TLAGLR---------ALGYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRK--II 108
           T   +            GY+             L  +  +      +L+ ++ Q+    I
Sbjct: 65  TRDEVVNTRFSALLKEYGYEADGALLEQKYRRFLE-EGHQLIDGAFDLISNLQQQFDLYI 123

Query: 109 FTNSDRNHAITCLKRLEIADCFDQIICFE 137
            TN   +     L+   +   F  I   E
Sbjct: 124 VTNGVSHTQYKRLRDSGLFPFFKDIFVSE 152

>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} Length = 231

 Score = 44.2 bits (105), Expect = 6e-06
 Identities = 31/173 (17%), Positives = 57/173 (32%), Gaps = 24/173 (13%)

Query: 9   VFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLRALG 68
           +FD  +TL  +   I           ++++ G+      S+       Y  TL G R   
Sbjct: 29  IFDWYNTLIDTSINIDRTTFYQ----VLDQMGYKNIDLDSIPNSTIPKYLITLLGKR--- 81

Query: 69  YDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLE 125
           +      Y   +      D    +     LL ++ +  I   I +N +     + +    
Sbjct: 82  WKEATILYENSLEKSQKSDNFMLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKN 141

Query: 126 IADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHAV 178
           +   FD II                +    +KPS + +  AL   N++P   V
Sbjct: 142 LTHYFDSIIG-------------SGDTGT-IKPSPEPVLAALTNINIEPSKEV 180

>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} Length = 235

 Score = 43.6 bits (103), Expect = 1e-05
 Identities = 25/193 (12%), Positives = 52/193 (26%), Gaps = 40/193 (20%)

Query: 7   CLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLA---- 62
            + FD+ +TL      +     +     L +  G      ++  +E+        A    
Sbjct: 6   LVTFDVWNTLLDLNIMLDEFSHQ-----LAKISGLHIKDVANAVIEVRNEIKKMRAQASE 60

Query: 63  --------GLRALGYDIGADD---YHGFVHGRLPYDLIKPDPQLRNLLCSITQRKI---I 108
                      AL   +  D            L  D        +  L  + +R +   +
Sbjct: 61  DPRKVLTGSQEALAGKLKVDVELVKRATARAILNVDESLVLEGTKEALQFVKERGLKTAV 120

Query: 109 FTNSDRN---HAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKL 165
             N       +    L+R  + +  D+    +             E     KP  +  + 
Sbjct: 121 IGNVMFWPGSYTRLLLERFGLMEFIDKTFFAD-------------EVLS-YKPRKEMFEK 166

Query: 166 ALHVANVDPRHAV 178
            L+   V P  ++
Sbjct: 167 VLNSFEVKPEESL 179

>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 Length = 384

 Score = 44.0 bits (103), Expect = 1e-05
 Identities = 25/188 (13%), Positives = 56/188 (29%), Gaps = 10/188 (5%)

Query: 5   FNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKAS--SLRVELFKAYGSTLA 62
               +  LD+         AA  +       +        K +  +L  E+++ +     
Sbjct: 130 EQLPLQFLDNVKVGKNNIYAALEEFATTELHVSDATLFSLKGALWTLAQEVYQEWYLGSK 189

Query: 63  GLRAL-GYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAI 118
               +           G+++      +++P  +++ LL  +        I T       +
Sbjct: 190 LYEDVEKKIARTTFKTGYIYQ---EIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETV 246

Query: 119 TCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHAV 178
              + L +   F+      T +  L       +   L KP+  +   AL+  N D   + 
Sbjct: 247 VPFENLGLLPYFEADFIA-TASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYESY 305

Query: 179 RQSSFLIF 186
                 I 
Sbjct: 306 INKQDNIV 313

>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} Length = 233

 Score = 43.4 bits (103), Expect = 1e-05
 Identities = 30/184 (16%), Positives = 47/184 (25%), Gaps = 27/184 (14%)

Query: 3   SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLA 62
            P    +FDLD TL  S     AA K       ++            R           +
Sbjct: 4   RPQTSFIFDLDGTLTDSVYQNVAAWKE-----ALDAENIPLAMWRIHRKIGMSGGLMLKS 58

Query: 63  GLRALGYDIGADDYHGFVHGRLPY-----DLIKPDPQLRNLLCSITQRKI---IFTNSDR 114
             R  G  I  +                   I   P    LL ++ +  +   I T+   
Sbjct: 59  LSRETGMSITDEQAERLSEKHAQAYERLQHQIIALPGAVELLETLDKENLKWCIATSGGI 118

Query: 115 NHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDP 174
           + A   LK L++      I+  +         +         KP  D    A        
Sbjct: 119 DTATINLKALKLDINKINIVTRDD-------VSYG-------KPDPDLFLAAAKKIGAPI 164

Query: 175 RHAV 178
              +
Sbjct: 165 DECL 168

>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} PDB: 1x42_A Length = 234

 Score = 42.4 bits (100), Expect = 2e-05
 Identities = 37/188 (19%), Positives = 55/188 (29%), Gaps = 33/188 (17%)

Query: 8   LVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKA--SSLRVELFKAYGSTL---- 61
           + FD   TL   E    + +K   E                  L  E F  Y        
Sbjct: 5   VFFDSLGTLNSVEGAAKSHLKIMEEVLGDYPLNPKTLLDEYEKLTREAFSNYAGKPYRPL 64

Query: 62  ---------AGLRALGYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQR-KI-IFT 110
                          G+    + +   +         +  P++  +L S+  +  + + T
Sbjct: 65  RDILEEVMRKLAEKYGFKYPENFWEISLRMS--QRYGELYPEVVEVLKSLKGKYHVGMIT 122

Query: 111 NSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVA 170
           +SD   A+  L  L I D FD I   E             E     KP     +LAL  A
Sbjct: 123 DSDTEQAMAFLDALGIKDLFDSITTSE-------------EAGF-FKPHPRIFELALKKA 168

Query: 171 NVDPRHAV 178
            V    AV
Sbjct: 169 GVKGEEAV 176

>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} Length = 234

 Score = 42.5 bits (100), Expect = 2e-05
 Identities = 25/158 (15%), Positives = 50/158 (31%), Gaps = 18/158 (11%)

Query: 1   MDSPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVEL--FKAYG 58
           M      + FD DDTL+ +E       K+  +  L       E  A+  + E+   +  G
Sbjct: 4   MKELIKVIAFDADDTLWSNEPFFQEVEKQYTD-LLKPYGTSKEISAALFQTEMNNLQILG 62

Query: 59  STLAGLRALGYDIGADDYHGFVHGRLPYDL-----------IKPDPQLRNLLCSITQRK- 106
                      +      +G +   +   +           I+  P ++  L ++ +   
Sbjct: 63  YGAKAFTISMVETALQISNGKIAADIIRQIVDLGKSLLKMPIELLPGVKETLKTLKETGK 122

Query: 107 ---IIFTNSDRNHAITCLKRLEIADCFDQIICFETMNP 141
              ++ T  D       L+R  ++  FD I        
Sbjct: 123 YKLVVATKGDLLDQENKLERSGLSPYFDHIEVMSDKTE 160

>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} Length = 226

 Score = 42.6 bits (101), Expect = 2e-05
 Identities = 39/189 (20%), Positives = 61/189 (32%), Gaps = 40/189 (21%)

Query: 3   SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLR-------VELF- 54
           S +N ++FDLD TL  S  GI  +VK       + K        SSL           F 
Sbjct: 2   SLYNYVLFDLDGTLTDSAEGITKSVKY-----SLNKFDIQVEDLSSLNKFVGPPLKTSFM 56

Query: 55  KAYGSTLAGLRALGYDIGADDY--HGFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IF 109
           + Y            D   D +   G    +  YD I+       LL S+        + 
Sbjct: 57  EYYNFDEETATVA-IDYYRDYFKAKGMFENK-VYDGIEA------LLSSLKDYGFHLVVA 108

Query: 110 TNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHV 169
           T+     +   L+  ++A  FD I+                     L    D ++ A+  
Sbjct: 109 TSKPTVFSKQILEHFKLAFYFDAIVG-------------SSLDGK-LSTKEDVIRYAMES 154

Query: 170 ANVDPRHAV 178
            N+    A+
Sbjct: 155 LNIKSDDAI 163

>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} Length = 240

 Score = 41.6 bits (98), Expect = 4e-05
 Identities = 31/196 (15%), Positives = 60/196 (30%), Gaps = 43/196 (21%)

Query: 7   CLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKA----SSLRVELFKAYGS--- 59
            L FDLDDT++          +   + +  ++   S             EL+  YG    
Sbjct: 7   NLFFDLDDTIWAFSRNARDTFEEVYQKYSFDRYFDSFDHYYTLYQRRNTELWLEYGEGKV 66

Query: 60  TLAGLR---------ALGYDIG------ADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQ 104
           T   L          A+G +        ++D+   +            P  + +L  +  
Sbjct: 67  TKEELNRQRFFYPLQAVGVEDEALAERFSEDFFAIIP-----TKSGLMPHAKEVLEYLAP 121

Query: 105 R-KI-IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDA 162
           +  + I +N  R      ++   +   F +II  E +                 KP  + 
Sbjct: 122 QYNLYILSNGFRELQSRKMRSAGVDRYFKKIILSEDLGVL--------------KPRPEI 167

Query: 163 MKLALHVANVDPRHAV 178
              AL     + R ++
Sbjct: 168 FHFALSATQSELRESL 183

>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} Length = 225

 Score = 40.2 bits (95), Expect = 1e-04
 Identities = 34/187 (18%), Positives = 58/187 (31%), Gaps = 37/187 (19%)

Query: 4   PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAY-GSTLA 62
            +   +FD D TL  S  GI    +      ++E+ G++      +  ++ K   G TL 
Sbjct: 5   KYTVYLFDFDYTLADSSRGIVTCFRS-----VLERHGYTG-----ITDDMIKRTIGKTLE 54

Query: 63  GL--RALGYDIGADDYHGFVH------GRLPYDLIKPDPQLRNLLCSITQRKI---IFTN 111
                  G    AD    F                   P     L  + ++ I   I + 
Sbjct: 55  ESFSILTG-ITDADQLESFRQEYSKEADIYMNANTILFPDTLPTLTHLKKQGIRIGIIST 113

Query: 112 SDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVAN 171
             R   ++ L+     D FD II               ++     KP  + + LA+    
Sbjct: 114 KYRFRILSFLRNHMPDDWFDIIIG-------------GEDVTH-HKPDPEGLLLAIDRLK 159

Query: 172 VDPRHAV 178
             P   +
Sbjct: 160 ACPEEVL 166

>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 Length = 209

 Score = 40.2 bits (95), Expect = 1e-04
 Identities = 34/183 (18%), Positives = 60/183 (32%), Gaps = 34/183 (18%)

Query: 4   PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLA- 62
            +  L+FD+D TL  S+      ++      ++   G           +  K +      
Sbjct: 3   TYQALMFDIDGTLTNSQPAYTTVMRE-----VLATYGKPF-----SPAQAQKTFPMAAEQ 52

Query: 63  GLRALGYDIGADDYHGFVHGRLP-----YDLIKPDPQLRNLLCSITQRKI--IFTNSDRN 115
            +  LG  I A ++  F           YD I+  P + +L   +       I T+  RN
Sbjct: 53  AMTELG--IAASEFDHFQAQYEDVMASHYDQIELYPGITSLFEQLPSELRLGIVTSQRRN 110

Query: 116 HAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPR 175
              + ++           I               D+ P   KP    +  AL   NV P+
Sbjct: 111 ELESGMRSYPFMMRMAVTIS-------------ADDTPK-RKPDPLPLLTALEKVNVAPQ 156

Query: 176 HAV 178
           +A+
Sbjct: 157 NAL 159

>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A Length = 222

 Score = 39.8 bits (94), Expect = 2e-04
 Identities = 36/183 (19%), Positives = 63/183 (34%), Gaps = 32/183 (17%)

Query: 4   PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAY-GSTLA 62
               ++FDLD TL  S   IA A+++      +++ G  E        +    Y G  + 
Sbjct: 2   SLRVILFDLDGTLIDSAKDIALALEK-----TLKELGLEE-----YYPDNVTKYIGGGVR 51

Query: 63  GL--RALGYDIGADDYHGFVH--GRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRN 115
            L  + L      +    F       P    KP P++   L ++  +     + +N    
Sbjct: 52  ALLEKVLKDKFREEYVEVFRKHYLENPVVYTKPYPEIPYTLEALKSKGFKLAVVSNKLEE 111

Query: 116 HAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPR 175
            +   L  L ++  FD I+               D F    KPS   +   L +   +P 
Sbjct: 112 LSKKILDILNLSGYFDLIVG-------------GDTFGE-KKPSPTPVLKTLEILGEEPE 157

Query: 176 HAV 178
            A+
Sbjct: 158 KAL 160

>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} Length = 137

 Score = 37.4 bits (87), Expect = 7e-04
 Identities = 25/119 (21%), Positives = 41/119 (34%), Gaps = 27/119 (22%)

Query: 63  GLRALGYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAIT 119
           G+R L       DY G + G       +   + RNLL +  +  +   I +N        
Sbjct: 1   GMRGL-----IVDYAGVLDGT-----DEDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAA 50

Query: 120 CLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHAV 178
            ++ LE     D+++         S      E  V  KP   A + A    ++  R  V
Sbjct: 51  PIRELETNGVVDKVLL--------S-----GELGV-EKPEEAAFQAAADAIDLPMRDCV 95

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	191
3kbb_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	99.94
4g9b_A	243	Beta-PGM, beta-phosphoglucomutase; HAD, putative p	99.94
3nuq_A	282	Protein SSM1, putative nucleotide phosphatase; sup	99.93
2ah5_A	210	COG0546: predicted phosphatases; MCSG, structural	99.93
3ed5_A	238	YFNB; APC60080, bacillus subtilis subsp. subtilis	99.92
4gib_A	250	Beta-phosphoglucomutase; rossmann fold, HAD-like,	99.92
3qxg_A	243	Inorganic pyrophosphatase; hydrolase, magnesium bi	99.91
3e58_A	214	Putative beta-phosphoglucomutase; structu genomics	99.91
2hi0_A	240	Putative phosphoglycolate phosphatase; YP_619066.1	99.91
3dv9_A	247	Beta-phosphoglucomutase; structural genomics, APC6	99.91
3mc1_A	226	Predicted phosphatase, HAD family; PSI2, NYSGXRC,	99.9
3s6j_A	233	Hydrolase, haloacid dehalogenase-like family; stru	99.9
3qnm_A	240	Haloacid dehalogenase-like hydrolase; structural g	99.9
3l5k_A	250	Protein GS1, haloacid dehalogenase-like hydrolase	99.9
2pib_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	99.9
4ex6_A	237	ALNB; modified rossman fold, phosphatase, magnesiu	99.9
2gfh_A	260	Haloacid dehalogenase-like hydrolase domain conta;	99.9
2hdo_A	209	Phosphoglycolate phosphatase; NP_784602.1, structu	99.9
3cnh_A	200	Hydrolase family protein; NP_295428.1, predicted h	99.9
4eek_A	259	Beta-phosphoglucomutase-related protein; hydrolase	99.9
2nyv_A	222	Pgpase, PGP, phosphoglycolate phosphatase; structu	99.9
3um9_A	230	Haloacid dehalogenase, type II; haloacid dehalogen	99.89
3sd7_A	240	Putative phosphatase; structural genomics, haloaci	99.89
2hoq_A	241	Putative HAD-hydrolase PH1655; haloacid dehalogena	99.89
2om6_A	235	Probable phosphoserine phosphatase; rossmann fold,	99.89
3umb_A	233	Dehalogenase-like hydrolase; 2.20A {Ralstonia sola	99.89
3kzx_A	231	HAD-superfamily hydrolase, subfamily IA, variant;	99.89
3nas_A	233	Beta-PGM, beta-phosphoglucomutase; PSI, structural	99.88
2hsz_A	243	Novel predicted phosphatase; structural genomics,	99.88
1zrn_A	232	L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud	99.88
2no4_A	240	(S)-2-haloacid dehalogenase IVA; HAD superfamily,	99.88
3iru_A	277	Phoshonoacetaldehyde hydrolase like protein; phosp	99.88
3smv_A	240	S-(-)-azetidine-2-carboxylate hydrolase; haloacid	99.88
2go7_A	207	Hydrolase, haloacid dehalogenase-like family; stru	99.87
2pke_A	251	Haloacid delahogenase-like family hydrolase; NP_63	99.87
2zg6_A	220	Putative uncharacterized protein ST2620, probable	99.87
2fi1_A	190	Hydrolase, haloacid dehalogenase-like family; stru	99.87
4dcc_A	229	Putative haloacid dehalogenase-like hydrolase; mag	99.87
3umc_A	254	Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru	99.87
3ddh_A	234	Putative haloacid dehalogenase-like family hydrol;	99.87
1te2_A	226	Putative phosphatase; structural genomics, phospha	99.87
1yns_A	261	E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo	99.87
3umg_A	254	Haloacid dehalogenase; defluorinase, hydrolase; 2.	99.87
3k1z_A	263	Haloacid dehalogenase-like hydrolase domain-conta	99.86
2fdr_A	229	Conserved hypothetical protein; SAD, structural ge	99.86
3d6j_A	225	Putative haloacid dehalogenase-like hydrolase; str	99.86
3u26_A	234	PF00702 domain protein; structural genomics, PSI-b	99.86
2wf7_A	221	Beta-PGM, beta-phosphoglucomutase; transition stat	99.86
1qq5_A	253	Protein (L-2-haloacid dehalogenase); hydrolase; 1.	99.86
3m9l_A	205	Hydrolase, haloacid dehalogenase-like family; HAD	99.85
3m1y_A	217	Phosphoserine phosphatase (SERB); NYSGXRC, PSI II,	99.85
2hcf_A	234	Hydrolase, haloacid dehalogenase-like family; NP_6	99.85
2i6x_A	211	Hydrolase, haloacid dehalogenase-like family; HAD	99.85
2qlt_A	275	(DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac	99.85
1swv_A	267	Phosphonoacetaldehyde hydrolase; HAD enzyme superf	99.85
3vay_A	230	HAD-superfamily hydrolase; rossmann fold, haloacid	99.83
2w43_A	201	Hypothetical 2-haloalkanoic acid dehalogenase; hyd	99.83
2b0c_A	206	Putative phosphatase; alpha-D-glucose-1-phosphate,	99.82
2g80_A	253	Protein UTR4; YEL038W, UTR4 protein (unknown trans	99.82
4eze_A	317	Haloacid dehalogenase-like hydrolase; magnesium bi	99.81
3ib6_A	189	Uncharacterized protein; structural genomics, unkn	99.81
2p11_A	231	Hypothetical protein; putative haloacid dehalogena	99.8
2fea_A	236	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	99.79
3fvv_A	232	Uncharacterized protein; unknown function, structu	99.79
3i28_A	555	Epoxide hydrolase 2; aromatic hydrocarbons catabol	99.79
1rku_A	206	Homoserine kinase; phosphoserine phosphatase, phos	99.79
1l7m_A	211	Phosphoserine phosphatase; rossmann fold, four-hel	99.78
1nnl_A	225	L-3-phosphoserine phosphatase; PSP, HPSP, phospho-	99.78
2oda_A	196	Hypothetical protein pspto_2114; haloacid dehaloge	99.77
3p96_A	415	Phosphoserine phosphatase SERB; ssgcid, structural	99.77
2gmw_A	211	D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi	99.76
3l8h_A	179	Putative haloacid dehalogenase-like hydrolase; HAD	99.75
2pr7_A	137	Haloacid dehalogenase/epoxide hydrolase family; NP	99.73
2wm8_A	187	MDP-1, magnesium-dependent phosphatase 1; haloacid	99.72
1yv9_A	264	Hydrolase, haloacid dehalogenase family; hypotheti	99.71
3kd3_A	219	Phosphoserine phosphohydrolase-like protein; csgid	99.7
2ho4_A	259	Haloacid dehalogenase-like hydrolase domain contai	99.69
3n28_A	335	Phosphoserine phosphatase; HAD family hydrolase, s	99.68
4ap9_A	201	Phosphoserine phosphatase; hydrolase, haloacid deh	99.67
2i7d_A	193	5'(3')-deoxyribonucleotidase, cytosolic type; hydr	99.67
3e8m_A	164	Acylneuraminate cytidylyltransferase; 2-keto-3-deo	99.65
2c4n_A	250	Protein NAGD; nucleotide phosphatase, HAD superfam	99.65
2fpr_A	176	Histidine biosynthesis bifunctional protein HISB;	99.64
2p9j_A	162	Hypothetical protein AQ2171; secsg, riken, PSI, st	99.64
1q92_A	197	5(3)-deoxyribonucleotidase; alpha-beta rossman fol	99.64
3mmz_A	176	Putative HAD family hydrolase; structural genomics	99.63
4dw8_A	279	Haloacid dehalogenase-like hydrolase; HAD, putativ	99.62
3zvl_A	416	Bifunctional polynucleotide phosphatase/kinase; hy	99.62
3ij5_A	211	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	99.61
3mn1_A	189	Probable YRBI family phosphatase; structural genom	99.6
2o2x_A	218	Hypothetical protein; structural genomics, joint c	99.59
1k1e_A	180	Deoxy-D-mannose-octulosonate 8-phosphate phosphat;	99.59
3gyg_A	289	NTD biosynthesis operon putative hydrolase NTDB; P	99.58
1vjr_A	271	4-nitrophenylphosphatase; TM1742, structural genom	99.58
2b82_A	211	APHA, class B acid phosphatase; DDDD acid phosphat	99.57
3nvb_A	387	Uncharacterized protein; protein FKBH, protein fkb	99.56
3n1u_A	191	Hydrolase, HAD superfamily, subfamily III A; struc	99.56
3n07_A	195	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	99.55
3mpo_A	279	Predicted hydrolase of the HAD superfamily; SGX, P	99.54
1qyi_A	384	ZR25, hypothetical protein; structural genomics, P	99.53
3skx_A	280	Copper-exporting P-type ATPase B; P1B-ATPase, ATP	99.53
2r8e_A	188	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	99.53
2oyc_A	306	PLP phosphatase, pyridoxal phosphate phosphatase;	99.52
3a1c_A	287	Probable copper-exporting P-type ATPase A; ATP-bin	99.51
2hx1_A	284	Predicted sugar phosphatases of the HAD superfamil	99.51
3epr_A	264	Hydrolase, haloacid dehalogenase-like family; stru	99.5
1zjj_A	263	Hypothetical protein PH1952; alpha/beta hydrolase	99.5
2x4d_A	271	HLHPP, phospholysine phosphohistidine inorganic py	99.49
3dnp_A	290	Stress response protein YHAX; structural PSI-2, pr	99.49
3pdw_A	266	Uncharacterized hydrolase YUTF; structural genomic	99.48
1wr8_A	231	Phosphoglycolate phosphatase; alpha / beta core do	99.46
3fzq_A	274	Putative hydrolase; YP_001086940.1, putative haloa	99.45
3bwv_A	180	Putative 5'(3')-deoxyribonucleotidase; NP_764060.1	99.44
2i33_A	258	Acid phosphatase; HAD superfamily, hydrolase; 1.57	99.44
2rbk_A	261	Putative uncharacterized protein; HAD-like phospha	99.42
2yj3_A	263	Copper-transporting ATPase; hydrolase, P-type ATPa	99.13
3l7y_A	304	Putative uncharacterized protein SMU.1108C; hydrol	99.38
3qgm_A	268	P-nitrophenyl phosphatase (PHO2); structural genom	99.37
3pgv_A	285	Haloacid dehalogenase-like hydrolase; structural g	99.35
3ewi_A	168	N-acylneuraminate cytidylyltransferase; beta barre	99.34
2pq0_A	258	Hypothetical conserved protein GK1056; hyopthetica	99.31
1rlm_A	271	Phosphatase; HAD family, rossman fold, hydrolase;	99.29
3r4c_A	268	Hydrolase, haloacid dehalogenase-like hydrolase; h	99.27
3ocu_A	262	Lipoprotein E; hydrolase, outer membrane; HET: NMN	99.25
3dao_A	283	Putative phosphatse; structural genomics, joint ce	99.25
3pct_A	260	Class C acid phosphatase; hydrolase, outer membran	99.21
1rkq_A	282	Hypothetical protein YIDA; two domain structure wi	99.15
3zx4_A	259	MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd	99.1
1l6r_A	227	Hypothetical protein TA0175; structural genomics,	99.1
1nrw_A	288	Hypothetical protein, haloacid dehalogenase-like h	99.05
4fe3_A	297	Cytosolic 5'-nucleotidase 3; substrate complex, HA	99.0
1nf2_A	268	Phosphatase; structural proteomics, HAD NEW fold,	98.94
1ltq_A	301	Polynucleotide kinase; phosphatase, alpha/beta, P-	98.94
1y8a_A	332	Hypothetical protein AF1437; structural genomics,	98.87
2b30_A	301	Pvivax hypothetical protein; SGPP, structural geno	98.82
4gxt_A	385	A conserved functionally unknown protein; structur	98.76
2hhl_A	195	CTD small phosphatase-like protein; CTD phosphatas	98.69
2ght_A	181	Carboxy-terminal domain RNA polymerase II polypept	98.62
1xvi_A	275	MPGP, YEDP, putative mannosyl-3-phosphoglycerate p	98.48
3ef0_A	372	RNA polymerase II subunit A C-terminal domain phos	98.23
4as2_A	327	Phosphorylcholine phosphatase; hydrolase, HAD supe	98.09
4g63_A	470	Cytosolic IMP-GMP specific 5'-nucleotidase; struct	98.05
2jc9_A	555	Cytosolic purine 5'-nucleotidase; cytosolic 5-prim	98.03
3j08_A	645	COPA, copper-exporting P-type ATPase A; copper tra	97.94
3j09_A	723	COPA, copper-exporting P-type ATPase A; copper tra	97.78
3kc2_A	352	Uncharacterized protein YKR070W; HAD-like, mitocho	97.53
3rfu_A	736	Copper efflux ATPase; alpha helical, CPC, CXXC, AT	97.5
3ar4_A	995	Sarcoplasmic/endoplasmic reticulum calcium ATPase;	97.34
3f9r_A	246	Phosphomannomutase; trypanosome glycobiology struc	97.23
3qle_A	204	TIM50P; chaperone, mitochondrion, preprotein trans	97.18
2amy_A	246	PMM 2, phosphomannomutase 2; HS.459855, HS.313504,	97.13
2zos_A	249	MPGP, mannosyl-3-phosphoglycerate phosphatase; hal	97.1
1s2o_A	244	SPP, sucrose-phosphatase; phosphohydrolase, HAD su	96.96
1xpj_A	126	Hypothetical protein; structural genomics, MCSG, p	96.92
1mhs_A	920	Proton pump, plasma membrane ATPase; ION transport	96.88
3shq_A	320	UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila	96.86
3b8c_A	885	ATPase 2, plasma membrane-type; P-type ATPase, pro	96.8
2zxe_A	1028	Na, K-ATPase alpha subunit; membrane protein, ION	96.8
2fue_A	262	PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ	96.74
2obb_A	142	Hypothetical protein; structural genomics, PSI-2,	96.66
2zos_A	249	MPGP, mannosyl-3-phosphoglycerate phosphatase; hal	96.55
3ixz_A	1034	Potassium-transporting ATPase alpha; ION pump, H+,	96.37
1s2o_A	244	SPP, sucrose-phosphatase; phosphohydrolase, HAD su	96.07
1u02_A	239	Trehalose-6-phosphate phosphatase related protein;	95.91
3kc2_A	352	Uncharacterized protein YKR070W; HAD-like, mitocho	95.51
3ef1_A	442	RNA polymerase II subunit A C-terminal domain phos	92.69
2fue_A	262	PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ	92.68
1qyi_A	384	ZR25, hypothetical protein; structural genomics, P	91.62
1u02_A	239	Trehalose-6-phosphate phosphatase related protein;	90.62
3geb_A	274	EYES absent homolog 2; hydrolase, activator, alter	90.07
2amy_A	246	PMM 2, phosphomannomutase 2; HS.459855, HS.313504,	89.99
2hhl_A	195	CTD small phosphatase-like protein; CTD phosphatas	89.72
2jc9_A	555	Cytosolic purine 5'-nucleotidase; cytosolic 5-prim	88.54
2ght_A	181	Carboxy-terminal domain RNA polymerase II polypept	86.82
3qgm_A	268	P-nitrophenyl phosphatase (PHO2); structural genom	85.71
1zjj_A	263	Hypothetical protein PH1952; alpha/beta hydrolase	82.22
3qle_A	204	TIM50P; chaperone, mitochondrion, preprotein trans	82.14
3pdw_A	266	Uncharacterized hydrolase YUTF; structural genomic	80.01

>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}

Probab=99.94  E-value=1.6e-27  Score=171.91  Aligned_cols=159  Identities=23%  Similarity=0.309  Sum_probs=117.2

Q ss_pred             ceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccHH-----HHHHcCCCCCccchhhh
Q 029593            5 FNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLA-----GLRALGYDIGADDYHGF   79 (191)
Q Consensus         5 ~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~   79 (191)
                      +|+|+||+||||+|+.+.+..++.+     +.+++|.+......     ....+....     ...........+.+...
T Consensus         1 IkAViFD~DGTL~ds~~~~~~a~~~-----~~~~~g~~~~~~~~-----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~   70 (216)
T 3kbb_A            1 MEAVIFDMDGVLMDTEPLYFEAYRR-----VAESYGKPYTEDLH-----RRIMGVPEREGLPILMEALEIKDSLENFKKR   70 (216)
T ss_dssp             CCEEEEESBTTTBCCGGGHHHHHHH-----HHHHTTCCCCHHHH-----HHHTTSCHHHHHHHHHHHTTCCSCHHHHHHH
T ss_pred             CeEEEECCCCcccCCHHHHHHHHHH-----HHHHcCCCCCHHHH-----HHHhccchhhhhhhhhhcccchhhHHHHHHH
Confidence            5899999999999999888888876     45667776433211     111121111     11222222233333222


Q ss_pred             hhcC---CCCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCC
Q 029593           80 VHGR---LPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFP  153 (191)
Q Consensus        80 ~~~~---~~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~  153 (191)
                      +...   .......+.||+.++++.|+++|+   ++||++...+...++.+|+..+|+.++++++.+.            
T Consensus        71 ~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~~fd~~~~~~~~~~------------  138 (216)
T 3kbb_A           71 VHEEKKRVFSELLKENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEKYFDVMVFGDQVKN------------  138 (216)
T ss_dssp             HHHHHHHHHHHHCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECGGGSSS------------
T ss_pred             HHHHHHHHHHHhcccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCccccccccccccCC------------
Confidence            2111   011226789999999999999987   9999999999999999999999999999998887            


Q ss_pred             CCCCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          154 VLLKPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       154 ~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                        +||+|++|+.+++++|++|++|++|||+.+|.
T Consensus       139 --~KP~p~~~~~a~~~lg~~p~e~l~VgDs~~Di  170 (216)
T 3kbb_A          139 --GKPDPEIYLLVLERLNVVPEKVVVFEDSKSGV  170 (216)
T ss_dssp             --CTTSTHHHHHHHHHHTCCGGGEEEEECSHHHH
T ss_pred             --CcccHHHHHHHHHhhCCCccceEEEecCHHHH
Confidence              49999999999999999999999999999873

>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}

Probab=99.94  E-value=4.2e-27  Score=173.03  Aligned_cols=156  Identities=18%  Similarity=0.173  Sum_probs=108.3

Q ss_pred             CCCCceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHH----------HHHHHHHHHhcccHHHHHHcCCC
Q 029593            1 MDSPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKAS----------SLRVELFKAYGSTLAGLRALGYD   70 (191)
Q Consensus         1 M~~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~   70 (191)
                      |+|++|+|+||+||||+|+.+.+..++.+     +++++|++.....          .....+....+..        ..
T Consensus         1 M~MkiKaViFDlDGTL~Ds~~~~~~a~~~-----~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--------~~   67 (243)
T 4g9b_A            1 MVMKLQGVIFDLDGVITDTAHLHFQAWQQ-----IAAEIGISIDAQFNESLKGISRDESLRRILQHGGKE--------GD   67 (243)
T ss_dssp             -CCCCCEEEECSBTTTBCCHHHHHHHHHH-----HHHHTTCCCCTTGGGGGTTCCHHHHHHHHHHHTTCG--------GG
T ss_pred             CCccCcEEEEcCCCcccCCHHHHHHHHHH-----HHHHcCCCCCHHHHHHHcCCCHHHHHHHHHHHhhcc--------cc
Confidence            88999999999999999999888888887     4455565422110          0001111111110        00


Q ss_pred             CCccc-----------hhhhhhcCCCCCCCCCChhHHHHHHhhccCcE-EEecCChHHHHHHHhhcCCCcccceeeeccc
Q 029593           71 IGADD-----------YHGFVHGRLPYDLIKPDPQLRNLLCSITQRKI-IFTNSDRNHAITCLKRLEIADCFDQIICFET  138 (191)
Q Consensus        71 ~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~-i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~  138 (191)
                      .....           +......   .....+.||+.++++.|+++|+ +.+.++.......++.+|+..+|+.++++++
T Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~pg~~~ll~~L~~~g~~i~i~t~~~~~~~~l~~~gl~~~fd~i~~~~~  144 (243)
T 4g9b_A           68 FNSQERAQLAYRKNLLYVHSLRE---LTVNAVLPGIRSLLADLRAQQISVGLASVSLNAPTILAALELREFFTFCADASQ  144 (243)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHT---CCGGGBCTTHHHHHHHHHHTTCEEEECCCCTTHHHHHHHTTCGGGCSEECCGGG
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHh---cccccccccHHHHHHhhhcccccceecccccchhhhhhhhhhcccccccccccc
Confidence            11100           1111111   2224678999999999999998 3333333446778999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHcCCCCCceEEecCcccc
Q 029593          139 MNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHAVRQSSFLIF  186 (191)
Q Consensus       139 ~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~  186 (191)
                      ++.              +||+|++|..+++++|++|++|++|||+.+|
T Consensus       145 ~~~--------------~KP~p~~~~~a~~~lg~~p~e~l~VgDs~~d  178 (243)
T 4g9b_A          145 LKN--------------SKPDPEIFLAACAGLGVPPQACIGIEDAQAG  178 (243)
T ss_dssp             CSS--------------CTTSTHHHHHHHHHHTSCGGGEEEEESSHHH
T ss_pred             ccC--------------CCCcHHHHHHHHHHcCCChHHEEEEcCCHHH
Confidence            887              4999999999999999999999999999876

>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A*

Probab=99.93  E-value=1e-24  Score=163.34  Aligned_cols=173  Identities=30%  Similarity=0.451  Sum_probs=138.4

Q ss_pred             CceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccHHHHHHcCCCCCccchhhhhhcC
Q 029593            4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLRALGYDIGADDYHGFVHGR   83 (191)
Q Consensus         4 ~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (191)
                      ++|+|+||+||||+++...+..++..++.+++....+++...........+..++.....+.. ....+.+.+...+...
T Consensus        56 ~~k~i~FDlDGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~  134 (282)
T 3nuq_A           56 NLKVFFFDIDNCLYKSSTRIHDLMQQSILRFFQTHLKLSPEDAHVLNNSYYKEYGLAIRGLVM-FHKVNALEYNRLVDDS  134 (282)
T ss_dssp             CCCEEEECCTTTTSCCCHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHTHHHHHHHHH-TTSSCHHHHHHHHTTT
T ss_pred             CCCEEEEecCCCcccCCccHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHH-HcCCCHHHHHHHHhhh
Confidence            579999999999999998888888888888878888998877776665556666555544433 2344556666655543


Q ss_pred             CC-CCCCCCChhHHHHHHhhccCcE-----EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCC
Q 029593           84 LP-YDLIKPDPQLRNLLCSITQRKI-----IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLK  157 (191)
Q Consensus        84 ~~-~~~~~~~~~~~~~l~~l~~~g~-----i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~k  157 (191)
                      .. .....++|++.++++.|+++|+     ++||+....++..++.+|+..+|+.+++++..+.          ....+|
T Consensus       135 ~~~~~~~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~v~~~~~~~~----------~~~~~K  204 (282)
T 3nuq_A          135 LPLQDILKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLFDGLTYCDYSRT----------DTLVCK  204 (282)
T ss_dssp             SCGGGTCCCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTTSCSEEECCCCSSC----------SSCCCT
T ss_pred             hhhhhccCcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCcccccceEEEeccCCC----------cccCCC
Confidence            32 2347899999999999998763     9999999999999999999999999998776542          223469


Q ss_pred             CCHHHHHHHHHHcCCCC-CceEEecCccccc
Q 029593          158 PSMDAMKLALHVANVDP-RHAVRQSSFLIFY  187 (191)
Q Consensus       158 p~~~~~~~~~~~~~~~p-~~~i~iGDs~~~~  187 (191)
                      |++.+++.+++++|++| ++|++|||+.||.
T Consensus       205 p~~~~~~~~~~~lgi~~~~~~i~vGD~~~Di  235 (282)
T 3nuq_A          205 PHVKAFEKAMKESGLARYENAYFIDDSGKNI  235 (282)
T ss_dssp             TSHHHHHHHHHHHTCCCGGGEEEEESCHHHH
T ss_pred             cCHHHHHHHHHHcCCCCcccEEEEcCCHHHH
Confidence            99999999999999999 9999999999984

>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=99.93  E-value=5.4e-26  Score=163.51  Aligned_cols=160  Identities=21%  Similarity=0.211  Sum_probs=111.0

Q ss_pred             CCCceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccHH-HHHHcCCCCCccchhhhh
Q 029593            2 DSPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLA-GLRALGYDIGADDYHGFV   80 (191)
Q Consensus         2 ~~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~   80 (191)
                      ||++|+|+||+||||+|+...+..++..+     .+++|.+.......    ....+.... .+.........+++...+
T Consensus         1 mM~~k~viFDlDGTL~d~~~~~~~~~~~~-----~~~~g~~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~~~~~~~~   71 (210)
T 2ah5_A            1 MTSITAIFFDLDGTLVDSSIGIHNAFTYT-----FKELGVPSPDAKTI----RGFMGPPLESSFATCLSKDQISEAVQIY   71 (210)
T ss_dssp             CTTCCEEEECSBTTTEECHHHHHHHHHHH-----HHHHTCCCCCHHHH----HHTSSSCHHHHHHTTSCGGGHHHHHHHH
T ss_pred             CCCCCEEEEcCCCcCccCHHHHHHHHHHH-----HHHcCCCCCCHHHH----HHHcCccHHHHHHHHcCHHHHHHHHHHH
Confidence            13589999999999999998888777763     45556543211111    111222221 111110000111122211


Q ss_pred             hcC---CCCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCC
Q 029593           81 HGR---LPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPV  154 (191)
Q Consensus        81 ~~~---~~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~  154 (191)
                      ...   .......++||+.++++.|++ |+   ++||++...++..++.+|+..+|+.+++++  +.             
T Consensus        72 ~~~~~~~~~~~~~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~gl~~~f~~i~~~~--~~-------------  135 (210)
T 2ah5_A           72 RSYYKAKGIYEAQLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNLEIHHFFDGIYGSS--PE-------------  135 (210)
T ss_dssp             HHHHHHTGGGSCEECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEEC--SS-------------
T ss_pred             HHHHHHhccCCCCCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCchhheeeeecCC--CC-------------
Confidence            111   011235688999999999998 86   999999989999999999999999999887  44             


Q ss_pred             CCCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          155 LLKPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       155 ~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                       +||+|++|+.+++++|++|++|++||||.||.
T Consensus       136 -~Kp~p~~~~~~~~~lg~~p~~~~~vgDs~~Di  167 (210)
T 2ah5_A          136 -APHKADVIHQALQTHQLAPEQAIIIGDTKFDM  167 (210)
T ss_dssp             -CCSHHHHHHHHHHHTTCCGGGEEEEESSHHHH
T ss_pred             -CCCChHHHHHHHHHcCCCcccEEEECCCHHHH
Confidence             49999999999999999999999999999874

>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A

Probab=99.92  E-value=5e-24  Score=155.11  Aligned_cols=166  Identities=20%  Similarity=0.220  Sum_probs=119.1

Q ss_pred             CCCCceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHH-----HHHHHHh--cc-c---------HHH
Q 029593            1 MDSPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLR-----VELFKAY--GS-T---------LAG   63 (191)
Q Consensus         1 M~~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-----~~~~~~~--~~-~---------~~~   63 (191)
                      |++++|+|+||+||||+++...+..++.+     .+++.|.+........     ...+...  +. .         ...
T Consensus         3 ~mm~~k~i~fDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (238)
T 3ed5_A            3 AMKRYRTLLFDVDDTILDFQAAEALALRL-----LFEDQNIPLTNDMKAQYKTINQGLWRAFEEGKMTRDEVVNTRFSAL   77 (238)
T ss_dssp             -CCCCCEEEECCBTTTBCHHHHHHHHHHH-----HHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHH
T ss_pred             ccccCCEEEEcCcCcCcCCchhHHHHHHH-----HHHHcCCCcchHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHH
Confidence            55679999999999999999888877776     3455676633221110     0111111  00 0         111


Q ss_pred             HHHcCCCCCccchhhhhhcCCCCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCC
Q 029593           64 LRALGYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMN  140 (191)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~  140 (191)
                      +...+.....+.+...+.... .....++|++.++++.|+++ +   ++||+....++..++.+++..+|+.+++++..+
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~  155 (238)
T 3ed5_A           78 LKEYGYEADGALLEQKYRRFL-EEGHQLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRDSGLFPFFKDIFVSEDTG  155 (238)
T ss_dssp             HHHTTCCCCHHHHHHHHHHHH-TTCCCBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHHTTCGGGCSEEEEGGGTT
T ss_pred             HHHcCCCCcHHHHHHHHHHHH-HhcCCCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcChHhhhheEEEecccC
Confidence            222333333344444333322 22368899999999999987 5   999999999999999999999999999999887


Q ss_pred             CCCCCCCCCCCCCCCCCCCHHHHHHHHHHcC-CCCCceEEecCcc-ccc
Q 029593          141 PNLSKATRPDEFPVLLKPSMDAMKLALHVAN-VDPRHAVRQSSFL-IFY  187 (191)
Q Consensus       141 ~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~-~~p~~~i~iGDs~-~~~  187 (191)
                      .              +||+|.+++.+++++| ++|++|++|||+. ||.
T Consensus       156 ~--------------~kp~~~~~~~~~~~~g~~~~~~~i~vGD~~~~Di  190 (238)
T 3ed5_A          156 F--------------QKPMKEYFNYVFERIPQFSAEHTLIIGDSLTADI  190 (238)
T ss_dssp             S--------------CTTCHHHHHHHHHTSTTCCGGGEEEEESCTTTTH
T ss_pred             C--------------CCCChHHHHHHHHHcCCCChhHeEEECCCcHHHH
Confidence            7              4999999999999999 9999999999998 884

>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}

Probab=99.92  E-value=2e-25  Score=164.66  Aligned_cols=160  Identities=19%  Similarity=0.204  Sum_probs=108.6

Q ss_pred             CceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhccc----HHHHHH-cCCC--CCc---
Q 029593            4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGST----LAGLRA-LGYD--IGA---   73 (191)
Q Consensus         4 ~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~----~~~~~~-~~~~--~~~---   73 (191)
                      ++|+|+||+||||+|+.+.+..++.+     +++++|++......     ....+..    ...+.. ....  ...   
T Consensus        25 MIKaViFDlDGTLvDs~~~~~~a~~~-----~~~~~g~~~~~~~~-----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~   94 (250)
T 4gib_A           25 MIEAFIFDLDGVITDTAYYHYMAWRK-----LAHKVGIDIDTKFN-----ESLKGISRMESLDRILEFGNKKYSFSEEEK   94 (250)
T ss_dssp             CCCEEEECTBTTTBCCHHHHHHHHHH-----HHHTTTCCCCTTGG-----GGTTTCCHHHHHHHHHHHTTCTTTSCHHHH
T ss_pred             hhheeeecCCCcccCCHHHHHHHHHH-----HHHHcCCCCCHHHH-----HHHhCcchHHHHHHhhhhhcCCCCCCHHHH
Confidence            58999999999999999888888877     44556664221100     0000000    000000 0000  110   


Q ss_pred             ----cchhhhhhcCC-CCCCCCCChhHHHHHHhhccCcE-EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCC
Q 029593           74 ----DDYHGFVHGRL-PYDLIKPDPQLRNLLCSITQRKI-IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKAT  147 (191)
Q Consensus        74 ----~~~~~~~~~~~-~~~~~~~~~~~~~~l~~l~~~g~-i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~  147 (191)
                          +.....+.... ......+.|++.++++.|+++|+ ++++++...+...++.+|+..+|+.++++++.+.      
T Consensus        95 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ll~~Lk~~g~~i~i~~~~~~~~~~L~~~gl~~~Fd~i~~~~~~~~------  168 (250)
T 4gib_A           95 VRMAEEKNNYYVSLIDEITSNDILPGIESLLIDVKSNNIKIGLSSASKNAINVLNHLGISDKFDFIADAGKCKN------  168 (250)
T ss_dssp             HHHHHHHHHHHHHHHTTCCGGGSCTTHHHHHHHHHHTTCEEEECCSCTTHHHHHHHHTCGGGCSEECCGGGCCS------
T ss_pred             HHHHHHHHHHHHHHHhhccccccchhHHHHHHHHHhcccccccccccchhhhHhhhcccccccceeecccccCC------
Confidence                01111111110 12235688999999999999998 5555555567788999999999999999999887      


Q ss_pred             CCCCCCCCCCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          148 RPDEFPVLLKPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       148 ~~~~~~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                              +||+|++|..+++++|++|++|++|||+++|.
T Consensus       169 --------~KP~p~~~~~a~~~lg~~p~e~l~VGDs~~Di  200 (250)
T 4gib_A          169 --------NKPHPEIFLMSAKGLNVNPQNCIGIEDASAGI  200 (250)
T ss_dssp             --------CTTSSHHHHHHHHHHTCCGGGEEEEESSHHHH
T ss_pred             --------CCCcHHHHHHHHHHhCCChHHeEEECCCHHHH
Confidence                    49999999999999999999999999999873

>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A

Probab=99.91  E-value=7e-25  Score=160.66  Aligned_cols=162  Identities=17%  Similarity=0.247  Sum_probs=115.6

Q ss_pred             CCCCceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccH-----HHHH-HcCCCCCcc
Q 029593            1 MDSPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTL-----AGLR-ALGYDIGAD   74 (191)
Q Consensus         1 M~~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-----~~~~-~~~~~~~~~   74 (191)
                      |++++|+|+||+||||+++...+..++.++     ++..|........     ....+...     ..+. .++.....+
T Consensus        20 ~m~~~k~i~fDlDGTL~d~~~~~~~~~~~~-----~~~~g~~~~~~~~-----~~~~g~~~~~~~~~~~~~~~~~~~~~~   89 (243)
T 3qxg_A           20 MRKKLKAVLFDMDGVLFNSMPYHSEAWHQV-----MKTHGLDLSREEA-----YMHEGRTGASTINIVFQRELGKEATQE   89 (243)
T ss_dssp             --CCCCEEEECSBTTTBCCHHHHHHHHHHH-----HHHTTCCCCHHHH-----HHTTTSCHHHHHHHHHHHHHSSCCCHH
T ss_pred             ccccCCEEEEcCCCCCCCCHHHHHHHHHHH-----HHHhCCCCCHHHH-----HHHhCCCHHHHHHHHHHHHhCCCCCHH
Confidence            445699999999999999998888888774     4455665432221     11111111     0111 123333333


Q ss_pred             chhhhhhcC----CCCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCccc--ceeeecccCCCCCCC
Q 029593           75 DYHGFVHGR----LPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCF--DQIICFETMNPNLSK  145 (191)
Q Consensus        75 ~~~~~~~~~----~~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f--~~i~~~~~~~~~~~~  145 (191)
                      .+.......    .......++|++.++++.|+++|+   ++||+....+...++. ++..+|  +.+++++....    
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~d~i~~~~~~~~----  164 (243)
T 3qxg_A           90 EIESIYHEKSILFNSYPEAERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NFPGMFHKELMVTAFDVKY----  164 (243)
T ss_dssp             HHHHHHHHHHHHHHTSSCCCBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HSTTTCCGGGEECTTTCSS----
T ss_pred             HHHHHHHHHHHHHHhcccCCCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hHHHhcCcceEEeHHhCCC----
Confidence            333222110    012346789999999999999987   9999998888888888 999999  88999988776    


Q ss_pred             CCCCCCCCCCCCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          146 ATRPDEFPVLLKPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       146 ~~~~~~~~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                                +||+|.+++.+++++|++|++|++|||+.||.
T Consensus       165 ----------~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di  196 (243)
T 3qxg_A          165 ----------GKPNPEPYLMALKKGGLKADEAVVIENAPLGV  196 (243)
T ss_dssp             ----------CTTSSHHHHHHHHHTTCCGGGEEEEECSHHHH
T ss_pred             ----------CCCChHHHHHHHHHcCCCHHHeEEEeCCHHHH
Confidence                      59999999999999999999999999999984

>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}

Probab=99.91  E-value=8.9e-25  Score=156.31  Aligned_cols=160  Identities=14%  Similarity=0.105  Sum_probs=115.0

Q ss_pred             CceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhccc----HHHH-HHcCCCCCccchhh
Q 029593            4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGST----LAGL-RALGYDIGADDYHG   78 (191)
Q Consensus         4 ~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~~~~~   78 (191)
                      ++|+|+||+||||+++...+..++.+.     .+..|.+.....     .....+..    ...+ ...+.....+.+..
T Consensus         4 m~k~i~fDlDGTL~~~~~~~~~~~~~~-----~~~~g~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~   73 (214)
T 3e58_A            4 MVEAIIFDMDGVLFDTEKYYYDRRASF-----LGQKGISIDHLP-----PSFFIGGNTKQVWENILRDEYDKWDVSTLQE   73 (214)
T ss_dssp             CCCEEEEESBTTTBCCHHHHHHHHHHH-----HHHTTCCCTTSC-----HHHHTTSCGGGCHHHHHGGGGGGSCHHHHHH
T ss_pred             cccEEEEcCCCCccccHHHHHHHHHHH-----HHHcCCCCCHHH-----HHHHcCCCHHHHHHHHHHhhcCCCCHHHHHH
Confidence            589999999999999998888777763     344555422111     11111111    1111 11122222233322


Q ss_pred             hh----hcCCCCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCC
Q 029593           79 FV----HGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDE  151 (191)
Q Consensus        79 ~~----~~~~~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~  151 (191)
                      .+    ..........++|++.++++.|+++|+   ++||++...++..++.+++..+|+.+++++..+.          
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~----------  143 (214)
T 3e58_A           74 EYNTYKQNNPLPYKELIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGFFDIVLSGEEFKE----------  143 (214)
T ss_dssp             HHHHHHHHSCCCHHHHBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGCSS----------
T ss_pred             HHHHHHHHhhcccCCCcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHhheeeEeecccccC----------
Confidence            22    222111224688999999999999886   9999999999999999999999999999998776          


Q ss_pred             CCCCCCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          152 FPVLLKPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       152 ~~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                          +||++.+++.+++++|++|++|++|||+.||.
T Consensus       144 ----~kp~~~~~~~~~~~~~~~~~~~~~iGD~~~Di  175 (214)
T 3e58_A          144 ----SKPNPEIYLTALKQLNVQASRALIIEDSEKGI  175 (214)
T ss_dssp             ----CTTSSHHHHHHHHHHTCCGGGEEEEECSHHHH
T ss_pred             ----CCCChHHHHHHHHHcCCChHHeEEEeccHhhH
Confidence                49999999999999999999999999999984

>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}

Probab=99.91  E-value=2.4e-24  Score=157.77  Aligned_cols=159  Identities=16%  Similarity=0.240  Sum_probs=111.6

Q ss_pred             CceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHHhcccHH-HHH---------------H
Q 029593            4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFS-ETKASSLRVELFKAYGSTLA-GLR---------------A   66 (191)
Q Consensus         4 ~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~-~~~---------------~   66 (191)
                      ++|+|+||+||||+|+...+..++.++     .+.+|.+ .......    ....+.... ...               .
T Consensus         3 ~~k~viFDlDGTL~ds~~~~~~~~~~~-----~~~~g~~~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~   73 (240)
T 2hi0_A            3 KYKAAIFDMDGTILDTSADLTSALNYA-----FEQTGHRHDFTVEDI----KNFFGSGVVVAVTRALAYEAGSSRESLVA   73 (240)
T ss_dssp             SCSEEEECSBTTTEECHHHHHHHHHHH-----HHHTTSCCCCCHHHH----HHHCSSCHHHHHHHHHHHHTTCCHHHHTT
T ss_pred             cccEEEEecCCCCccCHHHHHHHHHHH-----HHHcCCCCCCCHHHH----HHhcCccHHHHHHHHHHhccccccccccc
Confidence            479999999999999999888888773     4555664 1111111    111111110 000               0


Q ss_pred             c-------CCCCCccc-------hhhhhhcCCCCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcc
Q 029593           67 L-------GYDIGADD-------YHGFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADC  129 (191)
Q Consensus        67 ~-------~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~  129 (191)
                      .       ......+.       +...+... ......++||+.++++.|+++|+   ++||++...++..++.+++. +
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~-~  151 (240)
T 2hi0_A           74 FGTKDEQIPEAVTQTEVNRVLEVFKPYYADH-CQIKTGPFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPG-S  151 (240)
T ss_dssp             TTSTTCCCCTTCCHHHHHHHHHHHHHHHHHT-SSSSCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHSTT-T
T ss_pred             ccccccccCCCCCHHHHHHHHHHHHHHHHHh-hhhcCCcCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc-c
Confidence            0       00111111       11111111 12346788999999999999886   99999998899999999998 9


Q ss_pred             cceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          130 FDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       130 f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      |+.+++++....              +||+|.++..+++++|++|++|++|||+.||.
T Consensus       152 f~~~~~~~~~~~--------------~Kp~p~~~~~~~~~l~~~~~~~~~vGDs~~Di  195 (240)
T 2hi0_A          152 FDFALGEKSGIR--------------RKPAPDMTSECVKVLGVPRDKCVYIGDSEIDI  195 (240)
T ss_dssp             CSEEEEECTTSC--------------CTTSSHHHHHHHHHHTCCGGGEEEEESSHHHH
T ss_pred             eeEEEecCCCCC--------------CCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHH
Confidence            999999887766              59999999999999999999999999999984

>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus}

Probab=99.91  E-value=3.3e-24  Score=156.96  Aligned_cols=160  Identities=17%  Similarity=0.252  Sum_probs=112.7

Q ss_pred             CCceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccHH-----HHH-HcCCCCCccch
Q 029593            3 SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLA-----GLR-ALGYDIGADDY   76 (191)
Q Consensus         3 ~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-----~~~-~~~~~~~~~~~   76 (191)
                      +++|+|+||+||||+++...+..++.++     +++.|.+......     ....+....     .+. ..+.....+.+
T Consensus        21 ~~~k~i~fDlDGTL~d~~~~~~~~~~~~-----~~~~g~~~~~~~~-----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~   90 (247)
T 3dv9_A           21 IDLKAVLFDMDGVLFDSMPNHAESWHKI-----MKRFGFGLSREEA-----YMHEGRTGASTINIVSRRERGHDATEEEI   90 (247)
T ss_dssp             CCCCEEEEESBTTTBCCHHHHHHHHHHH-----HHHTTCCCCHHHH-----HHTTTSCHHHHHHHHHHHHHSSCCCHHHH
T ss_pred             CCCCEEEECCCCccCcCHHHHHHHHHHH-----HHHcCCCCCHHHH-----HHHhCCChHHHHHHHHHHhcCCCCCHHHH
Confidence            4689999999999999998888788774     4455665432211     111111110     111 12333333333


Q ss_pred             hhhhhcC----CCCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCccc--ceeeecccCCCCCCCCC
Q 029593           77 HGFVHGR----LPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCF--DQIICFETMNPNLSKAT  147 (191)
Q Consensus        77 ~~~~~~~----~~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f--~~i~~~~~~~~~~~~~~  147 (191)
                      .......    .......++|++.++++.|+++|+   ++||+....+...++. ++..+|  +.+++++..+.      
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~~~~~~~~~~~~------  163 (247)
T 3dv9_A           91 KAIYQAKTEEFNKCPKAERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFPGIFQANLMVTAFDVKY------  163 (247)
T ss_dssp             HHHHHHHHHHHTTSCCCCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HSTTTCCGGGEECGGGCSS------
T ss_pred             HHHHHHHHHHHHhcccCCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHHHhcCCCeEEecccCCC------
Confidence            3222110    012346889999999999999987   9999998888888988 999999  88999988776      


Q ss_pred             CCCCCCCCCCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          148 RPDEFPVLLKPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       148 ~~~~~~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                              +||+|.+++.+++++|++|++|++|||+.||.
T Consensus       164 --------~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di  195 (247)
T 3dv9_A          164 --------GKPNPEPYLMALKKGGFKPNEALVIENAPLGV  195 (247)
T ss_dssp             --------CTTSSHHHHHHHHHHTCCGGGEEEEECSHHHH
T ss_pred             --------CCCCCHHHHHHHHHcCCChhheEEEeCCHHHH
Confidence                    59999999999999999999999999999984

>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0

Probab=99.90  E-value=1.6e-24  Score=156.82  Aligned_cols=161  Identities=23%  Similarity=0.285  Sum_probs=113.1

Q ss_pred             CCCCceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccHHH-HHHcCCCCCccc----
Q 029593            1 MDSPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAG-LRALGYDIGADD----   75 (191)
Q Consensus         1 M~~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~----   75 (191)
                      |+ ++|+|+||+||||+++...+..++.++     +++.|.+......    +....+..... +... .....+.    
T Consensus         1 M~-m~k~i~fDlDGTL~d~~~~~~~~~~~~-----~~~~g~~~~~~~~----~~~~~g~~~~~~~~~~-~~~~~~~~~~~   69 (226)
T 3mc1_A            1 MS-LYNYVLFDLDGTLTDSAEGITKSVKYS-----LNKFDIQVEDLSS----LNKFVGPPLKTSFMEY-YNFDEETATVA   69 (226)
T ss_dssp             -C-CCCEEEECSBTTTBCCHHHHHHHHHHH-----HHTTTCCCSCGGG----GGGGSSSCHHHHHHHH-HCCCHHHHHHH
T ss_pred             CC-CCCEEEEeCCCccccCHHHHHHHHHHH-----HHHcCCCCCCHHH----HHHHhCcCHHHHHHHH-hCCCHHHHHHH
Confidence            44 389999999999999998888787774     4445554221110    00011111110 0000 0111111    


Q ss_pred             ---hhhhhhcCCCCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCC
Q 029593           76 ---YHGFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRP  149 (191)
Q Consensus        76 ---~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~  149 (191)
                         +...+.. .......++|++.++++.|+++|+   ++||+....++..++.+++..+|+.+++++..+.        
T Consensus        70 ~~~~~~~~~~-~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~--------  140 (226)
T 3mc1_A           70 IDYYRDYFKA-KGMFENKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYFDAIVGSSLDGK--------  140 (226)
T ss_dssp             HHHHHHHHTT-TGGGSCCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECTTSS--------
T ss_pred             HHHHHHHHHH-hCcccCccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhheeeeeccCCCCC--------
Confidence               1111111 112336889999999999999876   9999999999999999999999999999988876        


Q ss_pred             CCCCCCCCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          150 DEFPVLLKPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       150 ~~~~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                            +||+|.+++.+++++|++|++|++|||+.||.
T Consensus       141 ------~kp~~~~~~~~~~~lgi~~~~~i~iGD~~~Di  172 (226)
T 3mc1_A          141 ------LSTKEDVIRYAMESLNIKSDDAIMIGDREYDV  172 (226)
T ss_dssp             ------SCSHHHHHHHHHHHHTCCGGGEEEEESSHHHH
T ss_pred             ------CCCCHHHHHHHHHHhCcCcccEEEECCCHHHH
Confidence                  49999999999999999999999999999984

>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}

Probab=99.90  E-value=2.6e-24  Score=156.14  Aligned_cols=163  Identities=19%  Similarity=0.141  Sum_probs=114.8

Q ss_pred             CCC-CceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccHH-----HHHHcCCCCCcc
Q 029593            1 MDS-PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLA-----GLRALGYDIGAD   74 (191)
Q Consensus         1 M~~-~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~   74 (191)
                      |++ ++|+|+||+||||+++...+..++..+     +++.|.+.....     +....+....     .+...+.....+
T Consensus         1 M~~~~~k~i~fDlDGTL~~~~~~~~~~~~~~-----~~~~g~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~   70 (233)
T 3s6j_A            1 MSLRPQTSFIFDLDGTLTDSVYQNVAAWKEA-----LDAENIPLAMWR-----IHRKIGMSGGLMLKSLSRETGMSITDE   70 (233)
T ss_dssp             ----CCCEEEECCBTTTEECHHHHHHHHHHH-----HHHTTCCCCHHH-----HHHHTTSCHHHHHHHHHHC----CCHH
T ss_pred             CCCCcCcEEEEcCCCccccChHHHHHHHHHH-----HHHcCCCCCHHH-----HHHHcCCcHHHHHHHHHHhcCCCCCHH
Confidence            543 589999999999999998887777763     455566533221     1111222211     111112222222


Q ss_pred             chhhhh---hcCC--CCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCC
Q 029593           75 DYHGFV---HGRL--PYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKA  146 (191)
Q Consensus        75 ~~~~~~---~~~~--~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~  146 (191)
                      .+....   ....  ......++|++.++++.|++.|+   ++||+....++..++.+++..+|+.+++++..+.     
T Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~-----  145 (233)
T 3s6j_A           71 QAERLSEKHAQAYERLQHQIIALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDINKINIVTRDDVSY-----  145 (233)
T ss_dssp             HHHHHHHHHHHHHHHTGGGCEECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCTTSSCEECGGGSSC-----
T ss_pred             HHHHHHHHHHHHHHHhhccCccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhhhhheeeccccCCC-----
Confidence            222211   1100  12336789999999999999886   9999999999999999999999999999998876     


Q ss_pred             CCCCCCCCCCCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          147 TRPDEFPVLLKPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       147 ~~~~~~~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                               +||++.+++.+++++|++|++|++|||+.||.
T Consensus       146 ---------~kp~~~~~~~~~~~l~~~~~~~i~iGD~~~Di  177 (233)
T 3s6j_A          146 ---------GKPDPDLFLAAAKKIGAPIDECLVIGDAIWDM  177 (233)
T ss_dssp             ---------CTTSTHHHHHHHHHTTCCGGGEEEEESSHHHH
T ss_pred             ---------CCCChHHHHHHHHHhCCCHHHEEEEeCCHHhH
Confidence                     49999999999999999999999999999984

>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0

Probab=99.90  E-value=1.9e-23  Score=152.03  Aligned_cols=164  Identities=20%  Similarity=0.283  Sum_probs=113.5

Q ss_pred             CCCCceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCH-----HHHHHHHH----HHHHHhcc------------
Q 029593            1 MDSPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSE-----TKASSLRV----ELFKAYGS------------   59 (191)
Q Consensus         1 M~~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~-----~~~~~~~~----~~~~~~~~------------   59 (191)
                      |.|++|+|+||+||||+++...+..++.++     .++.|.+.     ........    ..+..+..            
T Consensus         1 M~m~~k~i~fDlDGTL~d~~~~~~~~~~~~-----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (240)
T 3qnm_A            1 MSLKYKNLFFDLDDTIWAFSRNARDTFEEV-----YQKYSFDRYFDSFDHYYTLYQRRNTELWLEYGEGKVTKEELNRQR   75 (240)
T ss_dssp             --CCCSEEEECCBTTTBCHHHHHHHHHHHH-----HHHTTGGGTSSSHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHH
T ss_pred             CCCCceEEEEcCCCCCcCchhhHHHHHHHH-----HHHcCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHH
Confidence            666799999999999999998877777763     44556542     11111100    01111100            


Q ss_pred             cHHHHHHcCCCCCccchhh----hhhcCCCCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccce
Q 029593           60 TLAGLRALGYDIGADDYHG----FVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQ  132 (191)
Q Consensus        60 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~  132 (191)
                      ....+...+..  ......    .+.... .....++|++.++++.|+ +|+   ++||++...++..++.+++..+|+.
T Consensus        76 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l~~~~l~~~f~~  151 (240)
T 3qnm_A           76 FFYPLQAVGVE--DEALAERFSEDFFAII-PTKSGLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKMRSAGVDRYFKK  151 (240)
T ss_dssp             HHHHHHHTTCC--CHHHHHHHHHHHHHHG-GGCCCBSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHHHHHTCGGGCSE
T ss_pred             HHHHHHHcCCC--cHHHHHHHHHHHHHHh-hhcCCcCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHHcChHhhcee
Confidence            00111122222  222211    111111 233688999999999999 775   9999999999999999999999999


Q ss_pred             eeecccCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHcCCCCCceEEecCcc-ccc
Q 029593          133 IICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHAVRQSSFL-IFY  187 (191)
Q Consensus       133 i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~-~~~  187 (191)
                      +++++..+.              +||++.+++.+++++|++|++|++|||++ ||.
T Consensus       152 ~~~~~~~~~--------------~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di  193 (240)
T 3qnm_A          152 IILSEDLGV--------------LKPRPEIFHFALSATQSELRESLMIGDSWEADI  193 (240)
T ss_dssp             EEEGGGTTC--------------CTTSHHHHHHHHHHTTCCGGGEEEEESCTTTTH
T ss_pred             EEEeccCCC--------------CCCCHHHHHHHHHHcCCCcccEEEECCCchHhH
Confidence            999998877              49999999999999999999999999996 985

>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens}

Probab=99.90  E-value=2.1e-24  Score=158.72  Aligned_cols=163  Identities=14%  Similarity=0.110  Sum_probs=114.6

Q ss_pred             CCCCceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccH-----HHHHHcCCCCCccc
Q 029593            1 MDSPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTL-----AGLRALGYDIGADD   75 (191)
Q Consensus         1 M~~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~   75 (191)
                      |++++|+|+||+||||+++...+..++.++     .++.|.+......     ....+...     ..+..++.....+.
T Consensus        26 ~~~~ik~i~fDlDGTL~d~~~~~~~~~~~~-----~~~~g~~~~~~~~-----~~~~g~~~~~~~~~~~~~~~~~~~~~~   95 (250)
T 3l5k_A           26 PPQPVTHLIFDMDGLLLDTERLYSVVFQEI-----CNRYDKKYSWDVK-----SLVMGKKALEAAQIIIDVLQLPMSKEE   95 (250)
T ss_dssp             CCCCCSEEEEETBTTTBCHHHHHHHHHHHH-----HHHTTCCCCHHHH-----HHHTTCCHHHHHHHHHHHHTCSSCHHH
T ss_pred             cccCCcEEEEcCCCCcCCCHHHHHHHHHHH-----HHHhCCCCCHHHH-----HHhcCCCHHHHHHHHHHHhCCCCCHHH
Confidence            345699999999999999988888777774     4555665322111     11112111     11122233333333


Q ss_pred             hhhhhhcCC--CCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhh-cCCCcccceeeecc--cCCCCCCCCC
Q 029593           76 YHGFVHGRL--PYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKR-LEIADCFDQIICFE--TMNPNLSKAT  147 (191)
Q Consensus        76 ~~~~~~~~~--~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~-~~l~~~f~~i~~~~--~~~~~~~~~~  147 (191)
                      +...+....  ......+.|++.++++.|+++|+   ++||+....+...+.. +++..+|+.+++++  ..+.      
T Consensus        96 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~~l~~~f~~~~~~~~~~~~~------  169 (250)
T 3l5k_A           96 LVEESQTKLKEVFPTAALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFFSLFSHIVLGDDPEVQH------  169 (250)
T ss_dssp             HHHHHHHHHHHHGGGCCBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCHHHHTTSSCEECTTCTTCCS------
T ss_pred             HHHHHHHHHHHHhccCCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhccCHHhheeeEEecchhhccC------
Confidence            333222110  01347899999999999999987   9999998887777754 68889999999988  6666      


Q ss_pred             CCCCCCCCCCCCHHHHHHHHHHcCCCC--CceEEecCccccc
Q 029593          148 RPDEFPVLLKPSMDAMKLALHVANVDP--RHAVRQSSFLIFY  187 (191)
Q Consensus       148 ~~~~~~~~~kp~~~~~~~~~~~~~~~p--~~~i~iGDs~~~~  187 (191)
                              +||+|.+++.+++++|++|  ++|++|||+.||.
T Consensus       170 --------~Kp~~~~~~~~~~~lgi~~~~~~~i~iGD~~~Di  203 (250)
T 3l5k_A          170 --------GKPDPDIFLACAKRFSPPPAMEKCLVFEDAPNGV  203 (250)
T ss_dssp             --------CTTSTHHHHHHHHTSSSCCCGGGEEEEESSHHHH
T ss_pred             --------CCCChHHHHHHHHHcCCCCCcceEEEEeCCHHHH
Confidence                    5999999999999999998  9999999999984

>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A

Probab=99.90  E-value=2.1e-24  Score=157.35  Aligned_cols=160  Identities=14%  Similarity=0.096  Sum_probs=113.9

Q ss_pred             CCceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccHHHH-HHc-CCCCCccch----
Q 029593            3 SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGL-RAL-GYDIGADDY----   76 (191)
Q Consensus         3 ~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~----   76 (191)
                      +++|+|+||+||||+++...+..++.+++     +..|..... ..    .....+...... ..+ ......+.+    
T Consensus        17 ~~ik~i~fDlDGTL~d~~~~~~~~~~~~~-----~~~g~~~~~-~~----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~   86 (237)
T 4ex6_A           17 AADRGVILDLDGTLADTPAAIATITAEVL-----AAMGTAVSR-GA----ILSTVGRPLPASLAGLLGVPVEDPRVAEAT   86 (237)
T ss_dssp             CCCEEEEECSBTTTBCCHHHHHHHHHHHH-----HHTTCCCCH-HH----HHHHTTSCHHHHHHHHHTSCTTSHHHHHHH
T ss_pred             ccCCEEEEcCCCCCcCCHHHHHHHHHHHH-----HHcCCCCCH-HH----HHHhcCccHHHHHHHHhCCCCCHHHHHHHH
Confidence            47999999999999999988887887744     444422111 11    111222221111 111 111111111    


Q ss_pred             ---hhhhhcCCCC--CCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCC
Q 029593           77 ---HGFVHGRLPY--DLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATR  148 (191)
Q Consensus        77 ---~~~~~~~~~~--~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~  148 (191)
                         ...+.... .  ....++|++.++++.|+++|+   ++||+....++..++.+++..+|+.+++++..+.       
T Consensus        87 ~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~-------  158 (237)
T 4ex6_A           87 EEYGRRFGAHV-RAAGPRLLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTRLTVIAGDDSVER-------  158 (237)
T ss_dssp             HHHHHHHHHHH-HHHGGGGBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGTCSEEECTTTSSS-------
T ss_pred             HHHHHHHHHhc-ccccCCccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhheeeEEeCCCCCC-------
Confidence               11111110 1  336789999999999999987   9999999999999999999999999999988776       


Q ss_pred             CCCCCCCCCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          149 PDEFPVLLKPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       149 ~~~~~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                             +||++.+++.+++++|++|++|++|||+.||.
T Consensus       159 -------~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di  190 (237)
T 4ex6_A          159 -------GKPHPDMALHVARGLGIPPERCVVIGDGVPDA  190 (237)
T ss_dssp             -------CTTSSHHHHHHHHHHTCCGGGEEEEESSHHHH
T ss_pred             -------CCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHH
Confidence                   59999999999999999999999999999984

>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A

Probab=99.90  E-value=6.1e-23  Score=152.29  Aligned_cols=168  Identities=15%  Similarity=0.169  Sum_probs=114.4

Q ss_pred             CCceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHh-c-------ccHH---------HHH
Q 029593            3 SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAY-G-------STLA---------GLR   65 (191)
Q Consensus         3 ~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~-------~~~~---------~~~   65 (191)
                      +++|+|+||+||||+|+...+..++.+++.. +....|.+.. ............ +       ....         .+.
T Consensus        16 ~~~k~viFDlDGTLvds~~~~~~a~~~~~~~-~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (260)
T 2gfh_A           16 SRVRAVFFDLDNTLIDTAGASRRGMLEVIKL-LQSKYHYKEE-AEIICDKVQVKLSKECFHPYSTCITDVRTSHWEEAIQ   93 (260)
T ss_dssp             CCCCEEEECCBTTTBCHHHHHHHHHHHHHHH-HHHTTCCCTH-HHHHHHHHHHHHHTCCCC----CHHHHHHHHHHHHHH
T ss_pred             ccceEEEEcCCCCCCCCHHHHHHHHHHHHHH-HHHhcCCcHH-HHHHHHHHHHHHHhhccccccccHHHHHHHHHHHHHH
Confidence            3689999999999999998888888876554 2335666542 211111111111 1       0110         011


Q ss_pred             Hc-CCCCCcc---chhhhhhcCCCCCCCCCChhHHHHHHhhccCc-E-EEecCChHHHHHHHhhcCCCcccceeeecccC
Q 029593           66 AL-GYDIGAD---DYHGFVHGRLPYDLIKPDPQLRNLLCSITQRK-I-IFTNSDRNHAITCLKRLEIADCFDQIICFETM  139 (191)
Q Consensus        66 ~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g-~-i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~  139 (191)
                      .. ......+   .+...+... ....+.++||+.++|+.|++.. + |+||++...++..++.+|+..+|+.++++++.
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~L~~L~~~~~l~i~Tn~~~~~~~~~l~~~gl~~~f~~i~~~~~~  172 (260)
T 2gfh_A           94 ETKGGADNRKLAEECYFLWKST-RLQHMILADDVKAMLTELRKEVRLLLLTNGDRQTQREKIEACACQSYFDAIVIGGEQ  172 (260)
T ss_dssp             HHHCSSCCHHHHHHHHHHHHHH-HHHTCCCCHHHHHHHHHHHTTSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEGGGS
T ss_pred             HhcCccchHHHHHHHHHHHHHH-HHhcCCCCcCHHHHHHHHHcCCcEEEEECcChHHHHHHHHhcCHHhhhheEEecCCC
Confidence            11 1111111   111111110 0123689999999999998752 2 99999999999999999999999999999887


Q ss_pred             CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHcCCCCCceEEecCc-cccc
Q 029593          140 NPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHAVRQSSF-LIFY  187 (191)
Q Consensus       140 ~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs-~~~~  187 (191)
                      +.              +||+|.+|..+++++|++|++|++|||+ .+|.
T Consensus       173 ~~--------------~KP~p~~~~~~~~~~~~~~~~~~~vGDs~~~Di  207 (260)
T 2gfh_A          173 KE--------------EKPAPSIFYHCCDLLGVQPGDCVMVGDTLETDI  207 (260)
T ss_dssp             SS--------------CTTCHHHHHHHHHHHTCCGGGEEEEESCTTTHH
T ss_pred             CC--------------CCCCHHHHHHHHHHcCCChhhEEEECCCchhhH
Confidence            76              4999999999999999999999999995 8874

>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6

Probab=99.90  E-value=1.9e-23  Score=149.61  Aligned_cols=157  Identities=20%  Similarity=0.293  Sum_probs=113.4

Q ss_pred             CceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccHH-HHHHcCCCCCccchhhhh--
Q 029593            4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLA-GLRALGYDIGADDYHGFV--   80 (191)
Q Consensus         4 ~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~--   80 (191)
                      ++|+|+||+||||+++...+..++.++     .+..|.......     .....+.... .+..++.  ..+.+...+  
T Consensus         3 ~~k~iifDlDGTL~d~~~~~~~~~~~~-----~~~~g~~~~~~~-----~~~~~g~~~~~~~~~~~~--~~~~~~~~~~~   70 (209)
T 2hdo_A            3 TYQALMFDIDGTLTNSQPAYTTVMREV-----LATYGKPFSPAQ-----AQKTFPMAAEQAMTELGI--AASEFDHFQAQ   70 (209)
T ss_dssp             CCSEEEECSBTTTEECHHHHHHHHHHH-----HHTTTCCCCHHH-----HHHHTTSCHHHHHHHTTC--CGGGHHHHHHH
T ss_pred             cccEEEEcCCCCCcCCHHHHHHHHHHH-----HHHhCCCCCHHH-----HHHHcCCcHHHHHHHcCC--CHHHHHHHHHH
Confidence            479999999999999998887777763     445565422211     1122232222 2222221  112221111  


Q ss_pred             -hcCC--CCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCC
Q 029593           81 -HGRL--PYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPV  154 (191)
Q Consensus        81 -~~~~--~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~  154 (191)
                       ....  ......+.|++.++++.|+++ +   ++||++...++..++.+|+..+|+.++++++.+.             
T Consensus        71 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~-------------  136 (209)
T 2hdo_A           71 YEDVMASHYDQIELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRSYPFMMRMAVTISADDTPK-------------  136 (209)
T ss_dssp             HHHHHTTCGGGCEECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHHTTSGGGGGEEEEECGGGSSC-------------
T ss_pred             HHHHHhhhcccCCcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHHHHcChHhhccEEEecCcCCC-------------
Confidence             1110  113467899999999999987 5   9999999999999999999999999999888776             


Q ss_pred             CCCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          155 LLKPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       155 ~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                       .||+|.+++.+++++|++|++|++|||+.||.
T Consensus       137 -~KP~~~~~~~~~~~~~~~~~~~i~vGD~~~Di  168 (209)
T 2hdo_A          137 -RKPDPLPLLTALEKVNVAPQNALFIGDSVSDE  168 (209)
T ss_dssp             -CTTSSHHHHHHHHHTTCCGGGEEEEESSHHHH
T ss_pred             -CCCCcHHHHHHHHHcCCCcccEEEECCChhhH
Confidence             49999999999999999999999999999984

>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}

Probab=99.90  E-value=5.5e-23  Score=146.26  Aligned_cols=159  Identities=18%  Similarity=0.262  Sum_probs=112.5

Q ss_pred             CceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHh--c-ccHHH-HHHcCC----CCCccc
Q 029593            4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAY--G-STLAG-LRALGY----DIGADD   75 (191)
Q Consensus         4 ~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~-~~~~~-~~~~~~----~~~~~~   75 (191)
                      ++|+|+||+||||+++.. ...++..     ..+..|.+...........+..+  + ..... +.....    ....+.
T Consensus         3 ~~k~viFDlDGTL~d~~~-~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (200)
T 3cnh_A            3 TIKALFWDIGGVLLTNGW-DREQRAD-----VAQRFGLDTDDFTERHRLAAPELELGRMTLAEYLEQVVFYQPRDFTPED   76 (200)
T ss_dssp             CCCEEEECCBTTTBCCSS-CHHHHHH-----HHHHHTCCHHHHHHHHHHHHHHHHTTSSCHHHHHHHHTTTSCCSSCHHH
T ss_pred             CceEEEEeCCCeeECCCc-chHHHHH-----HHHHcCCCHHHHHHHHHhhchHHHcCCcCHHHHHHHHHHHcCCCCCHHH
Confidence            479999999999999874 2334444     45666777654433332222221  1 11111 221111    112222


Q ss_pred             hhhhhhcCCCCCCCCCChhHHHHHHhhccCcE--EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCC
Q 029593           76 YHGFVHGRLPYDLIKPDPQLRNLLCSITQRKI--IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFP  153 (191)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~--i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~  153 (191)
                      +...+..     ...++|++.++++.|+++|.  ++||++...++..++.+++..+|+.+++++..+.            
T Consensus        77 ~~~~~~~-----~~~~~~~~~~~l~~l~~~g~~~i~s~~~~~~~~~~l~~~~~~~~f~~~~~~~~~~~------------  139 (200)
T 3cnh_A           77 FRAVMEE-----QSQPRPEVLALARDLGQRYRMYSLNNEGRDLNEYRIRTFGLGEFLLAFFTSSALGV------------  139 (200)
T ss_dssp             HHHHHHH-----TCCBCHHHHHHHHHHTTTSEEEEEECCCHHHHHHHHHHHTGGGTCSCEEEHHHHSC------------
T ss_pred             HHHHHHh-----cCccCccHHHHHHHHHHcCCEEEEeCCcHHHHHHHHHhCCHHHhcceEEeecccCC------------
Confidence            2222222     24689999999999998865  9999999999999999999999999999887766            


Q ss_pred             CCCCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          154 VLLKPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       154 ~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                        +||+|.+++.+++++|++|++|++|||++||.
T Consensus       140 --~Kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di  171 (200)
T 3cnh_A          140 --MKPNPAMYRLGLTLAQVRPEEAVMVDDRLQNV  171 (200)
T ss_dssp             --CTTCHHHHHHHHHHHTCCGGGEEEEESCHHHH
T ss_pred             --CCCCHHHHHHHHHHcCCCHHHeEEeCCCHHHH
Confidence              49999999999999999999999999999983

>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A

Probab=99.90  E-value=3.6e-24  Score=158.28  Aligned_cols=160  Identities=17%  Similarity=0.132  Sum_probs=116.4

Q ss_pred             CCceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccHH-----HHHHcCCCCCccchh
Q 029593            3 SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLA-----GLRALGYDIGADDYH   77 (191)
Q Consensus         3 ~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~   77 (191)
                      +++|+|+||+||||+++...+..++.+     ..++.|.+.......    ....+....     .....+.....+...
T Consensus        26 ~~ik~i~fDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~   96 (259)
T 4eek_A           26 APFDAVLFDLDGVLVESEGIIAQVWQS-----VLAERGLHLDLTEIA----MYFTGQRFDGVLAYLAQQHDFVPPPDFLD   96 (259)
T ss_dssp             CCCSEEEEESBTTTEECHHHHHHHHHH-----HHHHTTCCCCHHHHH----HHTTTCCHHHHHHHHHHHHCCCCCTTHHH
T ss_pred             cCCCEEEECCCCCcccCHHHHHHHHHH-----HHHHhCCCCCHHHHH----HHHhCCCHHHHHHHHHHHcCCCCCHHHHH
Confidence            368999999999999999888877776     345566653222111    111122111     111223333322222


Q ss_pred             h---hhhcCCCCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccce-eeecccCC-CCCCCCCCC
Q 029593           78 G---FVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQ-IICFETMN-PNLSKATRP  149 (191)
Q Consensus        78 ~---~~~~~~~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~-i~~~~~~~-~~~~~~~~~  149 (191)
                      .   .+.+..  ....++|++.++++.|+++|+   ++||+....++..++.+++..+|+. +++++..+ .        
T Consensus        97 ~~~~~~~~~~--~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~i~~~~~~~~~--------  166 (259)
T 4eek_A           97 VLETRFNAAM--TGVTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLTELAGEHIYDPSWVGGR--------  166 (259)
T ss_dssp             HHHHHHHHHH--TTCEECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCHHHHCSCEECGGGGTTC--------
T ss_pred             HHHHHHHHHh--ccCCcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChHhhccceEEeHhhcCcC--------
Confidence            2   222111  447889999999999999876   9999999999999999999999999 99888877 6        


Q ss_pred             CCCCCCCCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          150 DEFPVLLKPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       150 ~~~~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                            +||++.+++.+++.+|++|++|++|||+.||.
T Consensus       167 ------~Kp~~~~~~~~~~~lgi~~~~~i~iGD~~~Di  198 (259)
T 4eek_A          167 ------GKPHPDLYTFAAQQLGILPERCVVIEDSVTGG  198 (259)
T ss_dssp             ------CTTSSHHHHHHHHHTTCCGGGEEEEESSHHHH
T ss_pred             ------CCCChHHHHHHHHHcCCCHHHEEEEcCCHHHH
Confidence                  59999999999999999999999999999984

>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A

Probab=99.90  E-value=1.6e-24  Score=157.00  Aligned_cols=160  Identities=22%  Similarity=0.291  Sum_probs=112.2

Q ss_pred             CceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccHH-HHHHcCCCCCccch----hh
Q 029593            4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLA-GLRALGYDIGADDY----HG   78 (191)
Q Consensus         4 ~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~----~~   78 (191)
                      ++|+|+||+||||+++...+..++.++     .+..|.+......    +....+.... .+.........+++    ..
T Consensus         2 ~~k~viFDlDGTL~d~~~~~~~~~~~~-----~~~~g~~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~   72 (222)
T 2nyv_A            2 SLRVILFDLDGTLIDSAKDIALALEKT-----LKELGLEEYYPDN----VTKYIGGGVRALLEKVLKDKFREEYVEVFRK   72 (222)
T ss_dssp             EECEEEECTBTTTEECHHHHHHHHHHH-----HHHTTCGGGCCSC----GGGGCSSCHHHHHHHHHGGGCCTHHHHHHHH
T ss_pred             CCCEEEECCCCcCCCCHHHHHHHHHHH-----HHHcCCCCCCHHH----HHHHhCcCHHHHHHHHhChHHHHHHHHHHHH
Confidence            379999999999999998887777763     3445554111100    0011111111 01110001111222    22


Q ss_pred             hhhcCCCCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCC
Q 029593           79 FVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVL  155 (191)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~  155 (191)
                      .+... ......++|++.++++.|+++|+   ++||++...++..++.+|+..+|+.++++++.+.              
T Consensus        73 ~~~~~-~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~--------------  137 (222)
T 2nyv_A           73 HYLEN-PVVYTKPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGYFDLIVGGDTFGE--------------  137 (222)
T ss_dssp             HHHHC-SCSSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTTSSCT--------------
T ss_pred             HHHHh-ccccCccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHHHheEEEecCcCCC--------------
Confidence            22221 12346789999999999999886   9999999999999999999999999999887766              


Q ss_pred             CCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          156 LKPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       156 ~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      +||+|.++..+++++|++|++|++|||+.||.
T Consensus       138 ~Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di  169 (222)
T 2nyv_A          138 KKPSPTPVLKTLEILGEEPEKALIVGDTDADI  169 (222)
T ss_dssp             TCCTTHHHHHHHHHHTCCGGGEEEEESSHHHH
T ss_pred             CCCChHHHHHHHHHhCCCchhEEEECCCHHHH
Confidence            49999999999999999999999999999884

>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}

Probab=99.89  E-value=3.7e-23  Score=149.83  Aligned_cols=87  Identities=15%  Similarity=0.219  Sum_probs=80.6

Q ss_pred             CCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHH
Q 029593           87 DLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAM  163 (191)
Q Consensus        87 ~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~  163 (191)
                      ....++|++.++++.|+++|+   ++||++...++..++.+++..+|+.+++++..+.              +||++.++
T Consensus        93 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~--------------~kp~~~~~  158 (230)
T 3um9_A           93 LSLTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNSFDHLISVDEVRL--------------FKPHQKVY  158 (230)
T ss_dssp             TSCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGGGCSEEEEGGGTTC--------------CTTCHHHH
T ss_pred             hcCCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChhhcceeEehhhccc--------------CCCChHHH
Confidence            447889999999999999986   9999999999999999999999999999988876              49999999


Q ss_pred             HHHHHHcCCCCCceEEecCccccc
Q 029593          164 KLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       164 ~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      +.+++.+|++|++|++|||+.||.
T Consensus       159 ~~~~~~~~~~~~~~~~iGD~~~Di  182 (230)
T 3um9_A          159 ELAMDTLHLGESEILFVSCNSWDA  182 (230)
T ss_dssp             HHHHHHHTCCGGGEEEEESCHHHH
T ss_pred             HHHHHHhCCCcccEEEEeCCHHHH
Confidence            999999999999999999999884

>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}

Probab=99.89  E-value=1e-23  Score=154.11  Aligned_cols=158  Identities=17%  Similarity=0.240  Sum_probs=113.2

Q ss_pred             CceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccHH-HHHHcCCCCCccc-------
Q 029593            4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLA-GLRALGYDIGADD-------   75 (191)
Q Consensus         4 ~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-------   75 (191)
                      ++|+|+||+||||+++...+..++..+     ++..|.+.. ...    +....+.... .+... .....+.       
T Consensus        28 mik~iifDlDGTL~d~~~~~~~~~~~~-----~~~~g~~~~-~~~----~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~   96 (240)
T 3sd7_A           28 NYEIVLFDLDGTLTDPKEGITKSIQYS-----LNSFGIKED-LEN----LDQFIGPPLHDTFKEY-YKFEDKKAKEAVEK   96 (240)
T ss_dssp             CCSEEEECSBTTTEECHHHHHHHHHHH-----HHHTTCCCC-GGG----GGGGSSSCHHHHHHHT-SCCCHHHHHHHHHH
T ss_pred             hccEEEEecCCcCccCHHHHHHHHHHH-----HHHcCCCCC-HHH----HHHHhCccHHHHHHHH-hCCCHHHHHHHHHH
Confidence            579999999999999998888777764     444555411 100    0111111111 11111 1121111       


Q ss_pred             hhhhhhcCCCCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCC
Q 029593           76 YHGFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEF  152 (191)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~  152 (191)
                      +...+... ......++|++.++++.|+++|+   ++||+....++..++.+++..+|+.+++++..+.           
T Consensus        97 ~~~~~~~~-~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~-----------  164 (240)
T 3sd7_A           97 YREYFADK-GIFENKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYFKYIAGSNLDGT-----------  164 (240)
T ss_dssp             HHHHHHHT-GGGCCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECTTSC-----------
T ss_pred             HHHHHHHh-cccccccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHhhEEEEEeccccCC-----------
Confidence            11111111 12336789999999999999986   9999999999999999999999999999988776           


Q ss_pred             CCCCCCCHHHHHHHHHHcCCC-CCceEEecCccccc
Q 029593          153 PVLLKPSMDAMKLALHVANVD-PRHAVRQSSFLIFY  187 (191)
Q Consensus       153 ~~~~kp~~~~~~~~~~~~~~~-p~~~i~iGDs~~~~  187 (191)
                         +||++.+++.+++++|++ |++|++|||+.||.
T Consensus       165 ---~kp~~~~~~~~~~~~g~~~~~~~i~vGD~~~Di  197 (240)
T 3sd7_A          165 ---RVNKNEVIQYVLDLCNVKDKDKVIMVGDRKYDI  197 (240)
T ss_dssp             ---CCCHHHHHHHHHHHHTCCCGGGEEEEESSHHHH
T ss_pred             ---CCCCHHHHHHHHHHcCCCCCCcEEEECCCHHHH
Confidence               599999999999999999 99999999999984

>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}

Probab=99.89  E-value=7.8e-23  Score=149.64  Aligned_cols=168  Identities=26%  Similarity=0.265  Sum_probs=113.4

Q ss_pred             ceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcc----cHH-HHHHc-CCCCC--ccch
Q 029593            5 FNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGS----TLA-GLRAL-GYDIG--ADDY   76 (191)
Q Consensus         5 ~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~----~~~-~~~~~-~~~~~--~~~~   76 (191)
                      +|+|+||+||||+++...+..++..++.++.........................    ... ....+ +....  .+.+
T Consensus         2 ~k~iiFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (241)
T 2hoq_A            2 VKVIFFDLDDTLVDTSKLAEIARKNAIENMIRHGLPVDFETAYSELIELIKEYGSNFPYHFDYLLRRLDLPYNPKWISAG   81 (241)
T ss_dssp             CCEEEECSBTTTBCHHHHHHHHHHHHHHHHHHTTCCSCHHHHHHHHHHHHHHHCTTCTTHHHHHHHHTTCCCCHHHHHHH
T ss_pred             ccEEEEcCCCCCCCChhhHHHHHHHHHHHHHHccccccHHHHHHHHHHhhcccchhHHHHHHHHHHHhcCCccchHHHHH
Confidence            6899999999999999888878877665542111222222221111101101110    011 11222 21110  0112


Q ss_pred             hhhhhcCCCCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCC
Q 029593           77 HGFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFP  153 (191)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~  153 (191)
                      ...+.... .....++|++.++++.|+++|+   ++||+....++..++.+++..+|+.+++++..+.            
T Consensus        82 ~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~------------  148 (241)
T 2hoq_A           82 VIAYHNTK-FAYLREVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELDDFFEHVIISDFEGV------------  148 (241)
T ss_dssp             HHHHHHHH-HHHCCBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCGGGCSEEEEGGGGTC------------
T ss_pred             HHHHHHHH-HhhCCCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcHhhccEEEEeCCCCC------------
Confidence            22221111 1125789999999999999876   9999999999999999999999999999988776            


Q ss_pred             CCCCCCHHHHHHHHHHcCCCCCceEEecCcc-ccc
Q 029593          154 VLLKPSMDAMKLALHVANVDPRHAVRQSSFL-IFY  187 (191)
Q Consensus       154 ~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~-~~~  187 (191)
                        +||+|.+++.+++++|++|++|++|||+. ||.
T Consensus       149 --~Kp~~~~~~~~~~~~g~~~~~~i~iGD~~~~Di  181 (241)
T 2hoq_A          149 --KKPHPKIFKKALKAFNVKPEEALMVGDRLYSDI  181 (241)
T ss_dssp             --CTTCHHHHHHHHHHHTCCGGGEEEEESCTTTTH
T ss_pred             --CCCCHHHHHHHHHHcCCCcccEEEECCCchHhH
Confidence              49999999999999999999999999998 884

>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}

Probab=99.89  E-value=1.7e-22  Score=146.62  Aligned_cols=165  Identities=13%  Similarity=0.098  Sum_probs=112.3

Q ss_pred             CCCCceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHH-HHHH----HHHh---cccHH----HHHHcC
Q 029593            1 MDSPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSL-RVEL----FKAY---GSTLA----GLRALG   68 (191)
Q Consensus         1 M~~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~----~~~~---~~~~~----~~~~~~   68 (191)
                      |+| +|+|+||+||||++++..+..++.++     .+..|......... ....    +..+   |....    ....+.
T Consensus         1 M~m-~k~i~fDlDGTL~d~~~~~~~~~~~~-----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~   74 (235)
T 2om6_A            1 MRE-VKLVTFDVWNTLLDLNIMLDEFSHQL-----AKISGLHIKDVANAVIEVRNEIKKMRAQASEDPRKVLTGSQEALA   74 (235)
T ss_dssp             CCC-CCEEEECCBTTTBCHHHHHHHHHHHH-----HHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCTTTHHHHHHHHHH
T ss_pred             CCC-ceEEEEeCCCCCCCcchhHHHHHHHH-----HHHcCCCCcHHHHHHHHHHHHHHHHhhhhcCCCcchHHHHHHHHH
Confidence            553 79999999999999988777777763     44556664332210 0000    1100   21111    111110


Q ss_pred             --CCCCccc---hhhhhhcCCCCCCCCCChhHHHHHHhhccCcE---EEecCC---hHHHHHHHhhcCCCcccceeeecc
Q 029593           69 --YDIGADD---YHGFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSD---RNHAITCLKRLEIADCFDQIICFE  137 (191)
Q Consensus        69 --~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~---~~~~~~~l~~~~l~~~f~~i~~~~  137 (191)
                        .....+.   ....+....  ....++|++.++++.|+++|+   ++||+.   ...++..++.+++..+|+.+++++
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~f~~~~~~~  152 (235)
T 2om6_A           75 GKLKVDVELVKRATARAILNV--DESLVLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEFIDKTFFAD  152 (235)
T ss_dssp             HHHTCCHHHHHHHHHHHHHHC--CGGGBCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGGGCSEEEEHH
T ss_pred             HHhCCCHHHHHHHHHHHHHhc--cccCcCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHHHhhhheecc
Confidence              0111111   111111111  112359999999999999886   999998   888899999999999999999988


Q ss_pred             cCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHcCCCCCceEEecCcc-ccc
Q 029593          138 TMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHAVRQSSFL-IFY  187 (191)
Q Consensus       138 ~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~-~~~  187 (191)
                      +.+.              .||+|.++..+++++|++|++|++|||+. ||.
T Consensus       153 ~~~~--------------~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~nDi  189 (235)
T 2om6_A          153 EVLS--------------YKPRKEMFEKVLNSFEVKPEESLHIGDTYAEDY  189 (235)
T ss_dssp             HHTC--------------CTTCHHHHHHHHHHTTCCGGGEEEEESCTTTTH
T ss_pred             ccCC--------------CCCCHHHHHHHHHHcCCCccceEEECCChHHHH
Confidence            7776              49999999999999999999999999999 985

>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}

Probab=99.89  E-value=3.3e-23  Score=150.48  Aligned_cols=85  Identities=16%  Similarity=0.160  Sum_probs=79.6

Q ss_pred             CCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q 029593           89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKL  165 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~  165 (191)
                      ..++|++.++++.|+++|+   ++||++...++..++.+++..+|+.+++++..+.              +||+|.++..
T Consensus        98 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~--------------~kp~~~~~~~  163 (233)
T 3umb_A           98 LSAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGLFDHVLSVDAVRL--------------YKTAPAAYAL  163 (233)
T ss_dssp             CEECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTTTCSEEEEGGGTTC--------------CTTSHHHHTH
T ss_pred             CCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHhhcCEEEEecccCC--------------CCcCHHHHHH
Confidence            6789999999999999986   9999999999999999999999999999988776              5999999999


Q ss_pred             HHHHcCCCCCceEEecCccccc
Q 029593          166 ALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       166 ~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      +++++|++|++|++|||+.||.
T Consensus       164 ~~~~~~~~~~~~~~vGD~~~Di  185 (233)
T 3umb_A          164 APRAFGVPAAQILFVSSNGWDA  185 (233)
T ss_dssp             HHHHHTSCGGGEEEEESCHHHH
T ss_pred             HHHHhCCCcccEEEEeCCHHHH
Confidence            9999999999999999999874

>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}

Probab=99.89  E-value=2e-24  Score=156.91  Aligned_cols=157  Identities=17%  Similarity=0.221  Sum_probs=111.8

Q ss_pred             CceEEEEecCCCCCCChHHHHHHH-HHHHHHHHHHHhCCCHHHHH-----HHHHHHHHHhcccHHHHHHcCCCCCccchh
Q 029593            4 PFNCLVFDLDDTLYPSETGIAAAV-KRNIEGFLIEKCGFSETKAS-----SLRVELFKAYGSTLAGLRALGYDIGADDYH   77 (191)
Q Consensus         4 ~~k~iifD~DGTL~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (191)
                      ++|+|+||+||||+++...+..++ .++     .+..|.+.....     .....+....+.......        ..+.
T Consensus        24 ~~k~i~fDlDGTL~d~~~~~~~~~~~~~-----~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--------~~~~   90 (231)
T 3kzx_A           24 QPTAVIFDWYNTLIDTSINIDRTTFYQV-----LDQMGYKNIDLDSIPNSTIPKYLITLLGKRWKEAT--------ILYE   90 (231)
T ss_dssp             CCSEEEECTBTTTEETTSSCCHHHHHHH-----HHHTTCCCCCCTTSCTTTHHHHHHHHHGGGHHHHH--------HHHH
T ss_pred             CCCEEEECCCCCCcCCchhHHHHHHHHH-----HHHcCCCHHHHHHHhCccHHHHHHHHhCchHHHHH--------HHHH
Confidence            589999999999999987776666 653     344444321000     000001111111111100        1122


Q ss_pred             hhhhcCCCCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCC
Q 029593           78 GFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPV  154 (191)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~  154 (191)
                      ..+..........+.|++.++++.|+++|+   ++||++...++..++.+++..+|+.+++++..+.             
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~-------------  157 (231)
T 3kzx_A           91 NSLEKSQKSDNFMLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHYFDSIIGSGDTGT-------------  157 (231)
T ss_dssp             HHHHHCCSCCCCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEETSSSC-------------
T ss_pred             HHHhhhcccccceECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchhheeeEEcccccCC-------------
Confidence            222211223457889999999999999986   9999999999999999999999999999988776             


Q ss_pred             CCCCCHHHHHHHHHHcCCCCC-ceEEecCccccc
Q 029593          155 LLKPSMDAMKLALHVANVDPR-HAVRQSSFLIFY  187 (191)
Q Consensus       155 ~~kp~~~~~~~~~~~~~~~p~-~~i~iGDs~~~~  187 (191)
                       +||++.+++.+++++|++|+ +|++|||+.||.
T Consensus       158 -~Kp~~~~~~~~~~~lgi~~~~~~v~vGD~~~Di  190 (231)
T 3kzx_A          158 -IKPSPEPVLAALTNINIEPSKEVFFIGDSISDI  190 (231)
T ss_dssp             -CTTSSHHHHHHHHHHTCCCSTTEEEEESSHHHH
T ss_pred             -CCCChHHHHHHHHHcCCCcccCEEEEcCCHHHH
Confidence             59999999999999999999 999999999984

>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}

Probab=99.88  E-value=1.4e-23  Score=152.60  Aligned_cols=158  Identities=20%  Similarity=0.162  Sum_probs=101.8

Q ss_pred             CceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccHH-----HHHHcCC--CCCccch
Q 029593            4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLA-----GLRALGY--DIGADDY   76 (191)
Q Consensus         4 ~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~--~~~~~~~   76 (191)
                      ++|+|+||+||||+++...+..++..+     .+..|.+.....     .....+....     .+...+.  ....+..
T Consensus         1 ~ik~i~fDlDGTL~d~~~~~~~~~~~~-----~~~~g~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~   70 (233)
T 3nas_A            1 SLKAVIFDLDGVITDTAEYHFLAWKHI-----AEQIDIPFDRDM-----NERLKGISREESLESILIFGGAETKYTNAEK   70 (233)
T ss_dssp             -CCEEEECSBTTTBCHHHHHHHHHHHH-----HHHTTCCCCHHH-----HHHTTTCCHHHHHHHHHHHTTCTTTSCHHHH
T ss_pred             CCcEEEECCCCCcCCCHHHHHHHHHHH-----HHHcCCCCCHHH-----HHHHcCCCHHHHHHHHHHHhCCCCCCCHHHH
Confidence            479999999999999998888777774     455666532211     1111122111     1111111  2222221


Q ss_pred             hh-------hhhcCC-CCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCC
Q 029593           77 HG-------FVHGRL-PYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSK  145 (191)
Q Consensus        77 ~~-------~~~~~~-~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~  145 (191)
                      ..       .+.... ......++|++.++++.|+++|+   ++||+..  ++..++.+++..+|+.+++++..+.    
T Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~~f~~i~~~~~~~~----  144 (233)
T 3nas_A           71 QELMHRKNRDYQMLISKLTPEDLLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIIDDFHAIVDPTTLAK----  144 (233)
T ss_dssp             HHHHHHHHHHHHHHHHTCCGGGSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTTTCSEECCC---------
T ss_pred             HHHHHHHHHHHHHHHhhcCcCCcCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHhhcCEEeeHhhCCC----
Confidence            11       111111 01123479999999999999987   8888754  7888999999999999999988776    


Q ss_pred             CCCCCCCCCCCCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          146 ATRPDEFPVLLKPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       146 ~~~~~~~~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                                +||+|.+++.+++++|++|++|++|||+.||-
T Consensus       145 ----------~Kp~~~~~~~~~~~lgi~~~~~i~vGDs~~Di  176 (233)
T 3nas_A          145 ----------GKPDPDIFLTAAAMLDVSPADCAAIEDAEAGI  176 (233)
T ss_dssp             --------------CCHHHHHHHHHTSCGGGEEEEECSHHHH
T ss_pred             ----------CCCChHHHHHHHHHcCCCHHHEEEEeCCHHHH
Confidence                      49999999999999999999999999999984

>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6

Probab=99.88  E-value=3.2e-23  Score=152.20  Aligned_cols=160  Identities=14%  Similarity=0.207  Sum_probs=112.7

Q ss_pred             CceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccHH-----HHHH----cCCCCCcc
Q 029593            4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLA-----GLRA----LGYDIGAD   74 (191)
Q Consensus         4 ~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-----~~~~----~~~~~~~~   74 (191)
                      ++|+|+||+||||+++...+..++.+     +.+.+|.+........    ...+....     .+..    +......+
T Consensus        22 ~~k~iiFDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~~~~~   92 (243)
T 2hsz_A           22 QFKLIGFDLDGTLVNSLPDLALSINS-----ALKDVNLPQASENLVM----TWIGNGADVLSQRAVDWACKQAEKELTED   92 (243)
T ss_dssp             SCSEEEECSBTTTEECHHHHHHHHHH-----HHHHTTCCCCCHHHHH----HHCSSCHHHHHHHHHHHHHHHHTCCCCHH
T ss_pred             cCCEEEEcCCCcCCCCHHHHHHHHHH-----HHHHcCCCCCCHHHHH----HHhCchHHHHHHHHhhhhhccccccCCHH
Confidence            68999999999999999888777776     3455666422111111    11111100     0000    01122221


Q ss_pred             c-------hhhhhhcCCCCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCC
Q 029593           75 D-------YHGFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLS  144 (191)
Q Consensus        75 ~-------~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~  144 (191)
                      .       +...+... ......++|++.++++.|+++|+   ++||++...++.+++.+|+..+|+.+++++....   
T Consensus        93 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~---  168 (243)
T 2hsz_A           93 EFKYFKRQFGFYYGEN-LCNISRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSEMLGGQSLPE---  168 (243)
T ss_dssp             HHHHHHHHHHHHHHHH-TTSSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTTTSSS---
T ss_pred             HHHHHHHHHHHHHHHh-ccccCccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCchheEEEEEecccCCC---
Confidence            1       11112111 12336788999999999999886   9999999999999999999999999999887665   


Q ss_pred             CCCCCCCCCCCCCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          145 KATRPDEFPVLLKPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       145 ~~~~~~~~~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                                 .||+|.++..+++++|++|++|++|||+.||.
T Consensus       169 -----------~Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di  200 (243)
T 2hsz_A          169 -----------IKPHPAPFYYLCGKFGLYPKQILFVGDSQNDI  200 (243)
T ss_dssp             -----------CTTSSHHHHHHHHHHTCCGGGEEEEESSHHHH
T ss_pred             -----------CCcCHHHHHHHHHHhCcChhhEEEEcCCHHHH
Confidence                       49999999999999999999999999999984

>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A

Probab=99.88  E-value=1e-22  Score=148.03  Aligned_cols=85  Identities=16%  Similarity=0.245  Sum_probs=79.0

Q ss_pred             CCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q 029593           89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKL  165 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~  165 (191)
                      ..++|++.++++.|+++|+   ++||++...++..++.+++..+|+.+++++..+.              +||+|.+++.
T Consensus        94 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~--------------~Kp~~~~~~~  159 (232)
T 1zrn_A           94 LAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDHLLSVDPVQV--------------YKPDNRVYEL  159 (232)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEESGGGTC--------------CTTSHHHHHH
T ss_pred             CCCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChHhhhheEEEecccCC--------------CCCCHHHHHH
Confidence            6788999999999999886   8999999999999999999999999999888776              4999999999


Q ss_pred             HHHHcCCCCCceEEecCccccc
Q 029593          166 ALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       166 ~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      +++++|++|++|++|||+.||.
T Consensus       160 ~~~~~~~~~~~~~~iGD~~~Di  181 (232)
T 1zrn_A          160 AEQALGLDRSAILFVASNAWDA  181 (232)
T ss_dssp             HHHHHTSCGGGEEEEESCHHHH
T ss_pred             HHHHcCCCcccEEEEeCCHHHH
Confidence            9999999999999999999884

>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A*

Probab=99.88  E-value=1.3e-22  Score=148.31  Aligned_cols=85  Identities=16%  Similarity=0.199  Sum_probs=79.3

Q ss_pred             CCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q 029593           89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKL  165 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~  165 (191)
                      ..++|++.++++.|+++|+   ++||++...++..++.+|+..+|+.+++++..+.              +||+|.+++.
T Consensus       104 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~--------------~Kp~~~~~~~  169 (240)
T 2no4_A          104 LSAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDRVLDSCLSADDLKI--------------YKPDPRIYQF  169 (240)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGTTC--------------CTTSHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcHHHcCEEEEccccCC--------------CCCCHHHHHH
Confidence            6789999999999999886   8999999999999999999999999999988776              4999999999


Q ss_pred             HHHHcCCCCCceEEecCccccc
Q 029593          166 ALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       166 ~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      +++++|++|++|++|||+.||.
T Consensus       170 ~~~~~~~~~~~~~~iGD~~~Di  191 (240)
T 2no4_A          170 ACDRLGVNPNEVCFVSSNAWDL  191 (240)
T ss_dssp             HHHHHTCCGGGEEEEESCHHHH
T ss_pred             HHHHcCCCcccEEEEeCCHHHH
Confidence            9999999999999999999874

>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0

Probab=99.88  E-value=8.5e-23  Score=151.84  Aligned_cols=166  Identities=13%  Similarity=0.036  Sum_probs=111.0

Q ss_pred             CCceEEEEecCCCCCCChHHH-HHHHHHHHHHHHHHHhCCCHHHHHHHH------HHHHHHhccc----HHHHHHcCCCC
Q 029593            3 SPFNCLVFDLDDTLYPSETGI-AAAVKRNIEGFLIEKCGFSETKASSLR------VELFKAYGST----LAGLRALGYDI   71 (191)
Q Consensus         3 ~~~k~iifD~DGTL~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~------~~~~~~~~~~----~~~~~~~~~~~   71 (191)
                      +++|+|+||+||||+++...+ ..++.+     .++..|++........      ..........    .......+...
T Consensus        12 ~~~k~i~fDlDGTL~d~~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (277)
T 3iru_A           12 GPVEALILDWAGTTIDFGSLAPVYAFME-----LFKQEGIEVTQAEAREPMGTEKSEHIRRMLGNSRIANAWLSIKGQAS   86 (277)
T ss_dssp             CCCCEEEEESBTTTBSTTCCHHHHHHHH-----HHHTTTCCCCHHHHHTTTTSCHHHHHHHHTTSHHHHHHHHHHHSSCC
T ss_pred             ccCcEEEEcCCCCcccCCcccHHHHHHH-----HHHHhCCCCCHHHHHHHhcCchHHHHHHhccchHHHHHHHHHhccCC
Confidence            468999999999999987654 455655     3455565422111000      0000000000    00111112222


Q ss_pred             Cccchhhhhhc---C---CCCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcc-cceeeecccCCC
Q 029593           72 GADDYHGFVHG---R---LPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADC-FDQIICFETMNP  141 (191)
Q Consensus        72 ~~~~~~~~~~~---~---~~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~-f~~i~~~~~~~~  141 (191)
                      ..+.+......   .   .......++|++.++++.|+++|+   ++||++...++..++.+++..+ |+.+++++....
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  166 (277)
T 3iru_A           87 NEEDIKRLYDLFAPIQTRIVAQRSQLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQGYTPASTVFATDVVR  166 (277)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHTTCCCSEEECGGGSSS
T ss_pred             CHHHHHHHHHHHHHHHHHHhhccCccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcccCCCceEecHHhcCC
Confidence            22222221111   0   001226789999999999999886   9999999999999999998888 899999988776


Q ss_pred             CCCCCCCCCCCCCCCCCCHHHHHHHHHHcCCCC-CceEEecCccccc
Q 029593          142 NLSKATRPDEFPVLLKPSMDAMKLALHVANVDP-RHAVRQSSFLIFY  187 (191)
Q Consensus       142 ~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~p-~~~i~iGDs~~~~  187 (191)
                                    +||++.+++.+++++|++| ++|++|||+.||.
T Consensus       167 --------------~kp~~~~~~~~~~~lgi~~~~~~i~vGD~~~Di  199 (277)
T 3iru_A          167 --------------GRPFPDMALKVALELEVGHVNGCIKVDDTLPGI  199 (277)
T ss_dssp             --------------CTTSSHHHHHHHHHHTCSCGGGEEEEESSHHHH
T ss_pred             --------------CCCCHHHHHHHHHHcCCCCCccEEEEcCCHHHH
Confidence                          5999999999999999999 9999999999984

>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas}

Probab=99.88  E-value=3.9e-22  Score=145.01  Aligned_cols=161  Identities=20%  Similarity=0.193  Sum_probs=110.9

Q ss_pred             CC-CCceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhc----------------c-cHH
Q 029593            1 MD-SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYG----------------S-TLA   62 (191)
Q Consensus         1 M~-~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~----------------~-~~~   62 (191)
                      |+ +++|+|+||+||||+++...+..++.++     .+..|.+....... ..+.....                . ...
T Consensus         1 M~~~~~k~i~fD~DGTL~d~~~~~~~~~~~~-----~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (240)
T 3smv_A            1 MQLTDFKALTFDCYGTLIDWETGIVNALQPL-----AKRTGKTFTSDELL-EVFGRNESPQQTETPGALYQDILRAVYDR   74 (240)
T ss_dssp             CCGGGCSEEEECCBTTTBCHHHHHHHHTHHH-----HHHHTCCCCHHHHH-HHHHHHHGGGCCSSCCSCHHHHHHHHHHH
T ss_pred             CCCccceEEEEeCCCcCcCCchhHHHHHHHH-----HHHhCCCCCHHHHH-HHHHHHHHHHHhhCCCCChhHHHHHHHHH
Confidence            54 3689999999999999998888777764     34456653222111 11111100                0 001


Q ss_pred             HHHHcCCCCCccchhhhhhcCCCCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccC
Q 029593           63 GLRALGYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETM  139 (191)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~  139 (191)
                      .....+.....+ ....+...  .....++|++.++++.|++ |+   ++||++...+...++.  +..+|+.++++++.
T Consensus        75 ~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~l~~l~~-~~~~~i~tn~~~~~~~~~l~~--l~~~fd~i~~~~~~  148 (240)
T 3smv_A           75 IAKEWGLEPDAA-EREEFGTS--VKNWPAFPDTVEALQYLKK-HYKLVILSNIDRNEFKLSNAK--LGVEFDHIITAQDV  148 (240)
T ss_dssp             HHHHTTCCCCHH-HHHHHHTG--GGGCCBCTTHHHHHHHHHH-HSEEEEEESSCHHHHHHHHTT--TCSCCSEEEEHHHH
T ss_pred             HHHHhCCCCCHH-HHHHHHHH--HhcCCCCCcHHHHHHHHHh-CCeEEEEeCCChhHHHHHHHh--cCCccCEEEEcccc
Confidence            112223232222 22222221  2346889999999999998 55   9999999888888887  56799999999888


Q ss_pred             CCCCCCCCCCCCCCCCCCCCHHHHHHH---HHHcCCCCCceEEecCcc-ccc
Q 029593          140 NPNLSKATRPDEFPVLLKPSMDAMKLA---LHVANVDPRHAVRQSSFL-IFY  187 (191)
Q Consensus       140 ~~~~~~~~~~~~~~~~~kp~~~~~~~~---~~~~~~~p~~~i~iGDs~-~~~  187 (191)
                      +.              .||+|.++..+   ++++|++|++|++|||++ ||.
T Consensus       149 ~~--------------~KP~~~~~~~~l~~~~~lgi~~~~~~~vGD~~~~Di  186 (240)
T 3smv_A          149 GS--------------YKPNPNNFTYMIDALAKAGIEKKDILHTAESLYHDH  186 (240)
T ss_dssp             TS--------------CTTSHHHHHHHHHHHHHTTCCGGGEEEEESCTTTTH
T ss_pred             CC--------------CCCCHHHHHHHHHHHHhcCCCchhEEEECCCchhhh
Confidence            77              49999999999   899999999999999997 984

>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=99.87  E-value=2.1e-22  Score=143.02  Aligned_cols=157  Identities=17%  Similarity=0.176  Sum_probs=108.9

Q ss_pred             CceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhc-ccH-HHHHHcC--CCCCccchh--
Q 029593            4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYG-STL-AGLRALG--YDIGADDYH--   77 (191)
Q Consensus         4 ~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~--~~~~~~~~~--   77 (191)
                      ++|+|+||+||||+++...+..++.+++     +..|........ +    ...+ ... .....+.  .... ..+.  
T Consensus         3 ~~k~i~fDlDGTL~~~~~~~~~~~~~~~-----~~~g~~~~~~~~-~----~~~g~~~~~~~~~~~~~~~~~~-~~~~~~   71 (207)
T 2go7_A            3 QKTAFIWDLDGTLLDSYEAILSGIEETF-----AQFSIPYDKEKV-R----EFIFKYSVQDLLVRVAEDRNLD-VEVLNQ   71 (207)
T ss_dssp             -CCEEEECTBTTTEECHHHHHHHHHHHH-----HHHTCCCCHHHH-H----HHHHHSCHHHHHHHHHHHHTCC-HHHHHH
T ss_pred             cccEEEEeCCCcccccHHHHHHHHHHHH-----HHcCCCCCHHHH-H----HHHccccHHHHHHHhhchhhcc-HHHHHH
Confidence            4799999999999999988877777643     444553221111 0    1111 111 0111100  0110 1111  


Q ss_pred             --hhhhcCCCCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCC
Q 029593           78 --GFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEF  152 (191)
Q Consensus        78 --~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~  152 (191)
                        ...... ......+.|++.++++.|+++|+   ++||+...... .++.+++..+|+.+++++..+.           
T Consensus        72 ~~~~~~~~-~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~~f~~~~~~~~~~~-----------  138 (207)
T 2go7_A           72 VRAQSLAE-KNAQVVLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVESYFTEILTSQSGFV-----------  138 (207)
T ss_dssp             HHHHHHTT-CGGGCEECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGGGEEEEECGGGCCC-----------
T ss_pred             HHHHHHHh-ccccceeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchhheeeEEecCcCCC-----------
Confidence              111111 12346789999999999999886   89999888888 8999999999999999887766           


Q ss_pred             CCCCCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          153 PVLLKPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       153 ~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                         .||++.++..+++.+|++|++|++|||+.||.
T Consensus       139 ---~Kp~~~~~~~~~~~~~i~~~~~~~iGD~~nDi  170 (207)
T 2go7_A          139 ---RKPSPEAATYLLDKYQLNSDNTYYIGDRTLDV  170 (207)
T ss_dssp             ---CTTSSHHHHHHHHHHTCCGGGEEEEESSHHHH
T ss_pred             ---CCCCcHHHHHHHHHhCCCcccEEEECCCHHHH
Confidence               49999999999999999999999999999984

>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}

Probab=99.87  E-value=9.6e-22  Score=144.65  Aligned_cols=164  Identities=15%  Similarity=0.079  Sum_probs=110.1

Q ss_pred             CCCCceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHH--HH---HHHHHHHHHHhcccHHHH---------HH
Q 029593            1 MDSPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSET--KA---SSLRVELFKAYGSTLAGL---------RA   66 (191)
Q Consensus         1 M~~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~---~~~~~~~~~~~~~~~~~~---------~~   66 (191)
                      |.|++|+|+||+||||+++...+..++.+++..  +...|....  ..   .......+...|......         ..
T Consensus         9 M~M~~k~iifDlDGTL~d~~~~~~~~~~~~~~~--l~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~   86 (251)
T 2pke_A            9 DGQAIQLVGFDGDDTLWKSEDYYRTAEADFEAI--LSGYLDLGDSRMQQHLLAVERRNLKIFGYGAKGMTLSMIETAIEL   86 (251)
T ss_dssp             TTCSCCEEEECCBTTTBCCHHHHHHHHHHHHHH--HTTTCCC-----CTTHHHHHHHHHHHHCSSHHHHHHHHHHHHHHH
T ss_pred             cCCceeEEEEeCCCCCccCcHhHHHHHHHHHHH--HHHhCCchhHHHHHHHHHHHhhhhhhccCcchHHHHHHHHHHHHh
Confidence            333589999999999999998888777765433  245566531  10   000000111223322111         11


Q ss_pred             cCCCCCcc---chhhhhhcCCCCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCC
Q 029593           67 LGYDIGAD---DYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMN  140 (191)
Q Consensus        67 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~  140 (191)
                      .......+   .+...+... ......+.|++.++++.|+ +|+   ++||+....++..++.+++..+|+.++++    
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l~~~~l~~~f~~i~~~----  160 (251)
T 2pke_A           87 TEARIEARDIQRIVEIGRAT-LQHPVEVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIEQSGLSDLFPRIEVV----  160 (251)
T ss_dssp             TTTCCCHHHHHHHHHHHHHH-HTCCCCBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHHHHHSGGGTCCCEEEE----
T ss_pred             cCCCCChHHHHHHHHHHHHH-HhccCCcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCcHHhCceeeee----
Confidence            12122211   111111111 1234678999999999999 775   99999999999999999999999988874    


Q ss_pred             CCCCCCCCCCCCCCCCCCCHHHHHHHHHHcCCCCCceEEecCcc-ccc
Q 029593          141 PNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHAVRQSSFL-IFY  187 (191)
Q Consensus       141 ~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~-~~~  187 (191)
                                     +||+|.++..+++++|++|++|++|||+. ||.
T Consensus       161 ---------------~kp~~~~~~~~~~~l~~~~~~~i~iGD~~~~Di  193 (251)
T 2pke_A          161 ---------------SEKDPQTYARVLSEFDLPAERFVMIGNSLRSDV  193 (251)
T ss_dssp             ---------------SCCSHHHHHHHHHHHTCCGGGEEEEESCCCCCC
T ss_pred             ---------------CCCCHHHHHHHHHHhCcCchhEEEECCCchhhH
Confidence                           29999999999999999999999999999 985

>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii}

Probab=99.87  E-value=8.9e-23  Score=147.57  Aligned_cols=159  Identities=14%  Similarity=0.157  Sum_probs=101.4

Q ss_pred             CceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhccc-------------HHHHHHcCCC
Q 029593            4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGST-------------LAGLRALGYD   70 (191)
Q Consensus         4 ~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~   70 (191)
                      ++|+|+||+||||+++...+..++.+     ..+..|.+..... ....+....|..             ...+..++..
T Consensus         2 ~~k~viFDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~-~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~   75 (220)
T 2zg6_A            2 KYKAVLVDFGNTLVGFKPVFYEKVYQ-----VLKDNGYDLDLRK-VFRAYAKAMGMINYPDEDGLEHVDPKDFLYILGIY   75 (220)
T ss_dssp             CCCEEEECSBTTTEEEEETTHHHHHH-----HHHHTTCCCCHHH-HHHHHHHHGGGCCC-----CCCCCHHHHHHHHTCC
T ss_pred             CceEEEEcCCCceecccccHHHHHHH-----HHHHhCCCCCHHH-HHHHHHHHhhhccCCCccccccccHHHHHHHcCCC
Confidence            47999999999999998877767766     3455676542221 111122211211             1222233332


Q ss_pred             CCccchhhhhhcC-CCCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCC
Q 029593           71 IGADDYHGFVHGR-LPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKA  146 (191)
Q Consensus        71 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~  146 (191)
                      .. ++....+... .......++|++.++++.|+++|+   ++||++. .++..++.+|+..+|+.++++++.+.     
T Consensus        76 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~~gl~~~f~~~~~~~~~~~-----  148 (220)
T 2zg6_A           76 PS-ERLVKELKEADIRDGEAFLYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEKFDLKKYFDALALSYEIKA-----  148 (220)
T ss_dssp             CC-HHHHHHHHHTTTTCEEEEECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHHHTCGGGCSEEC------------
T ss_pred             Cc-HHHHHHHHHHhhcccCceECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHhcCcHhHeeEEEeccccCC-----
Confidence            22 2222222221 112235789999999999999986   8898866 57889999999999999999988776     


Q ss_pred             CCCCCCCCCCCCCHHHHHHHHHHcCCCCCceEEecCccc-cc
Q 029593          147 TRPDEFPVLLKPSMDAMKLALHVANVDPRHAVRQSSFLI-FY  187 (191)
Q Consensus       147 ~~~~~~~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~-~~  187 (191)
                               +||+|.++..+++++|++|   ++|||+++ |.
T Consensus       149 ---------~Kp~~~~~~~~~~~~~~~~---~~vgD~~~~Di  178 (220)
T 2zg6_A          149 ---------VKPNPKIFGFALAKVGYPA---VHVGDIYELDY  178 (220)
T ss_dssp             -------------CCHHHHHHHHHCSSE---EEEESSCCCCC
T ss_pred             ---------CCCCHHHHHHHHHHcCCCe---EEEcCCchHhH
Confidence                     4999999999999999998   99999998 75

>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3

Probab=99.87  E-value=1.3e-21  Score=137.87  Aligned_cols=156  Identities=15%  Similarity=0.128  Sum_probs=106.4

Q ss_pred             CceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccHHHH-HHcCCCCC-ccchhhhhh
Q 029593            4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGL-RALGYDIG-ADDYHGFVH   81 (191)
Q Consensus         4 ~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~   81 (191)
                      ++|+|+||+||||+++...+..++.++     .++.|.+...... .. ...  +...... ........ ...+...+.
T Consensus         5 ~~k~i~fDlDGTL~d~~~~~~~~~~~~-----~~~~g~~~~~~~~-~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (190)
T 2fi1_A            5 KYHDYIWDLGGTLLDNYETSTAAFVET-----LALYGITQDHDSV-YQ-ALK--VSTPFAIETFAPNLENFLEKYKENEA   75 (190)
T ss_dssp             CCSEEEECTBTTTBCHHHHHHHHHHHH-----HHHTTCCCCHHHH-HH-HHH--HCHHHHHHHHCTTCTTHHHHHHHHHH
T ss_pred             cccEEEEeCCCCcCCCHHHHHHHHHHH-----HHHhCCCCCHHHH-HH-HHc--cccHHHHHHHhhhHHHHHHHHHHHHH
Confidence            489999999999999988777777763     4455665322211 11 110  1111111 11111100 111222222


Q ss_pred             cCCCCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCC
Q 029593           82 GRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKP  158 (191)
Q Consensus        82 ~~~~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp  158 (191)
                      ... .. ..+.|++.++++.|+++|+   ++||... .++..++.+++..+|+.+++++....              +||
T Consensus        76 ~~~-~~-~~~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~~~~~~~f~~~~~~~~~~~--------------~kp  138 (190)
T 2fi1_A           76 REL-EH-PILFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKTSIAAYFTEVVTSSSGFK--------------RKP  138 (190)
T ss_dssp             HHT-TS-CCBCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHTTCGGGEEEEECGGGCCC--------------CTT
T ss_pred             Hhc-Cc-CccCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHHcCCHhheeeeeeccccCC--------------CCC
Confidence            211 12 3389999999999999886   8887764 67888999999999999999887766              499


Q ss_pred             CHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          159 SMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       159 ~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      +|.+++.+++++|++  +|++|||+.||.
T Consensus       139 ~~~~~~~~~~~~~~~--~~~~iGD~~~Di  165 (190)
T 2fi1_A          139 NPESMLYLREKYQIS--SGLVIGDRPIDI  165 (190)
T ss_dssp             SCHHHHHHHHHTTCS--SEEEEESSHHHH
T ss_pred             CHHHHHHHHHHcCCC--eEEEEcCCHHHH
Confidence            999999999999998  999999999984

>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A

Probab=99.87  E-value=5.9e-22  Score=143.97  Aligned_cols=157  Identities=17%  Similarity=0.194  Sum_probs=107.9

Q ss_pred             CceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHH---HHHHHHh--cc-cHH-----HHHHcCCCCC
Q 029593            4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLR---VELFKAY--GS-TLA-----GLRALGYDIG   72 (191)
Q Consensus         4 ~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~~~~~--~~-~~~-----~~~~~~~~~~   72 (191)
                      ++|+|+||+||||++++..   .+.+     ..+..|.+........   ...+..+  +. ...     .....+....
T Consensus        27 ~ik~viFD~DGTL~d~~~~---~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~   98 (229)
T 4dcc_A           27 GIKNLLIDLGGVLINLDRE---RCIE-----NFKKIGFQNIEEKFCTHQLDGIFLQQEKGLITPAEFRDGIREMMGKMVS   98 (229)
T ss_dssp             CCCEEEECSBTTTBCBCHH---HHHH-----HHHHHTCTTHHHHHHHTHHHHHHHHHHTTCSCHHHHHHHHHHHHTSCCC
T ss_pred             CCCEEEEeCCCeEEeCChH---HHHH-----HHHHhCCCcHHHHHHHhcCcHHHHHHHCCCCCHHHHHHHHHHHhCCCCC
Confidence            5899999999999998742   2222     2344566422211100   0011111  10 111     1112233444


Q ss_pred             ccchhhhhhcCCCCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHH------hhcCCCcccceeeecccCCCCC
Q 029593           73 ADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCL------KRLEIADCFDQIICFETMNPNL  143 (191)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l------~~~~l~~~f~~i~~~~~~~~~~  143 (191)
                      .+.+...+....    ..+.|++.++++.|+++ +   ++||++...++.++      +.+++..+|+.++++++.+.  
T Consensus        99 ~~~~~~~~~~~~----~~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~fd~i~~~~~~~~--  171 (229)
T 4dcc_A           99 DKQIDAAWNSFL----VDIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDYFEKTYLSYEMKM--  171 (229)
T ss_dssp             HHHHHHHHHTTB----CCCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHHHTSCBTTBCHHHHCSEEEEHHHHTC--
T ss_pred             HHHHHHHHHHHH----HhccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHhhhhhhccCCHHHhCCEEEeecccCC--
Confidence            555555554432    24679999999999987 5   99999998888554      77889899999999988876  


Q ss_pred             CCCCCCCCCCCCCCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          144 SKATRPDEFPVLLKPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       144 ~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                                  +||+|.+++.+++++|++|++|++|||+++|-
T Consensus       172 ------------~KP~~~~~~~~~~~~g~~~~~~~~vGD~~~Di  203 (229)
T 4dcc_A          172 ------------AKPEPEIFKAVTEDAGIDPKETFFIDDSEINC  203 (229)
T ss_dssp             ------------CTTCHHHHHHHHHHHTCCGGGEEEECSCHHHH
T ss_pred             ------------CCCCHHHHHHHHHHcCCCHHHeEEECCCHHHH
Confidence                        49999999999999999999999999999874

>3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa}

Probab=99.87  E-value=8e-22  Score=144.92  Aligned_cols=160  Identities=11%  Similarity=0.167  Sum_probs=110.1

Q ss_pred             CCceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccH---------------------
Q 029593            3 SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTL---------------------   61 (191)
Q Consensus         3 ~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~---------------------   61 (191)
                      |++|+|+||+||||+++...+..++.+     .+++.|.+........ .+........                     
T Consensus        20 m~ik~i~fDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (254)
T 3umc_A           20 QGMRAILFDVFGTLVDWRSSLIEQFQA-----LERELGGTLPCVELTD-RWRQQYKPAMDRVRNGQAPWQHLDQLHRQSL   93 (254)
T ss_dssp             SSCCEEEECCBTTTEEHHHHHHHHHHH-----HHHHSSSCCCHHHHHH-HHHHHTHHHHHHHHTTSSCCCCHHHHHHHHH
T ss_pred             cCCcEEEEeCCCccEecCccHHHHHHH-----HHHHhcCCCCHHHHHH-HHHHHHHHHHHHHhcccCCcccHHHHHHHHH
Confidence            468999999999999998888777776     4455666532221111 0111100000                     


Q ss_pred             -HHHHHcCCCCCccchhhhhhcCCCCCCCCCChhHHHHHHhhccCcE--EEecCChHHHHHHHhhcCCCcccceeeeccc
Q 029593           62 -AGLRALGYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKI--IFTNSDRNHAITCLKRLEIADCFDQIICFET  138 (191)
Q Consensus        62 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~--i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~  138 (191)
                       ..+...+.....+........   .....++|++.+++..|++...  ++||++...++..++.+++.  |+.+++++.
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~l~~~~~~~i~s~~~~~~~~~~l~~~g~~--f~~~~~~~~  168 (254)
T 3umc_A           94 EALAGEFGLALDEALLQRITGF---WHRLRPWPDTLAGMHALKADYWLAALSNGNTALMLDVARHAGLP--WDMLLCADL  168 (254)
T ss_dssp             HHHHHHTTCCCCHHHHHHHHGG---GGSCEECTTHHHHHHHHTTTSEEEECCSSCHHHHHHHHHHHTCC--CSEECCHHH
T ss_pred             HHHHHHhCCCCCHHHHHHHHHH---HhcCCCCccHHHHHHHHHhcCeEEEEeCCCHHHHHHHHHHcCCC--cceEEeecc
Confidence             011111222222111111111   2336788999999999988633  99999999999999999985  899999888


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          139 MNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       139 ~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      .+.              +||+|.+++.+++++|++|++|++|||+.||.
T Consensus       169 ~~~--------------~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~Di  203 (254)
T 3umc_A          169 FGH--------------YKPDPQVYLGACRLLDLPPQEVMLCAAHNYDL  203 (254)
T ss_dssp             HTC--------------CTTSHHHHHHHHHHHTCCGGGEEEEESCHHHH
T ss_pred             ccc--------------CCCCHHHHHHHHHHcCCChHHEEEEcCchHhH
Confidence            776              49999999999999999999999999999984

>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.87  E-value=7.4e-22  Score=142.88  Aligned_cols=161  Identities=18%  Similarity=0.189  Sum_probs=108.2

Q ss_pred             ceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHH---HHHhcccHH---------HHHHcCCCCC
Q 029593            5 FNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVEL---FKAYGSTLA---------GLRALGYDIG   72 (191)
Q Consensus         5 ~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~---~~~~~~~~~---------~~~~~~~~~~   72 (191)
                      +|+|+||+||||++++..+..++...+..  +...|.............   ....+....         ..........
T Consensus         8 ik~i~fDlDGTL~~~~~~~~~~~~~~~~~--l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (234)
T 3ddh_A            8 IKVIAFDADDTLWSNEPFFQEVEKQYTDL--LKPYGTSKEISAALFQTEMNNLQILGYGAKAFTISMVETALQISNGKIA   85 (234)
T ss_dssp             CCEEEECCBTTTBCCHHHHHHHHHHHHHH--TGGGSCHHHHHHHHHHHHHHTHHHHCSSHHHHHHHHHHHHHHHTTTCCC
T ss_pred             ccEEEEeCCCCCccCcchHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHhhhhhhhcCCcchhHHHHHHHHHHHhcCCCC
Confidence            89999999999999998777666653332  233442211111111000   011111111         1111122233


Q ss_pred             ccchhh---hhhcCCCCCCCCCChhHHHHHHhhccCc-E---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCC
Q 029593           73 ADDYHG---FVHGRLPYDLIKPDPQLRNLLCSITQRK-I---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSK  145 (191)
Q Consensus        73 ~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~l~~~g-~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~  145 (191)
                      .+....   .+.+.. .....++|++.++++.|+++| +   ++||+....++..++.+++..+|+.++++.        
T Consensus        86 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~~f~~~~~~~--------  156 (234)
T 3ddh_A           86 ADIIRQIVDLGKSLL-KMPIELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSPYFDHIEVMS--------  156 (234)
T ss_dssp             HHHHHHHHHHHHHHT-TCCCCBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGGGCSEEEEES--------
T ss_pred             HHHHHHHHHHHHHHh-hccCCcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHhhhheeeecC--------
Confidence            222222   122211 234688999999999999977 5   999999999999999999999999988742        


Q ss_pred             CCCCCCCCCCCCCCHHHHHHHHHHcCCCCCceEEecCcc-ccc
Q 029593          146 ATRPDEFPVLLKPSMDAMKLALHVANVDPRHAVRQSSFL-IFY  187 (191)
Q Consensus       146 ~~~~~~~~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~-~~~  187 (191)
                                 ||+|.+++.+++++|++|++|++|||++ ||.
T Consensus       157 -----------kpk~~~~~~~~~~lgi~~~~~i~iGD~~~~Di  188 (234)
T 3ddh_A          157 -----------DKTEKEYLRLLSILQIAPSELLMVGNSFKSDI  188 (234)
T ss_dssp             -----------CCSHHHHHHHHHHHTCCGGGEEEEESCCCCCC
T ss_pred             -----------CCCHHHHHHHHHHhCCCcceEEEECCCcHHHh
Confidence                       9999999999999999999999999997 985

>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6

Probab=99.87  E-value=4.3e-22  Score=143.50  Aligned_cols=160  Identities=16%  Similarity=0.130  Sum_probs=109.8

Q ss_pred             CceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccHH-----HHHHcCCC-CCccchh
Q 029593            4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLA-----GLRALGYD-IGADDYH   77 (191)
Q Consensus         4 ~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~-~~~~~~~   77 (191)
                      ++|+|+||+||||+++...+..++..+     +++.|.+......    +....|....     .....+.. ...+.+.
T Consensus         8 ~~k~i~fDlDGTL~~~~~~~~~~~~~~-----~~~~g~~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~   78 (226)
T 1te2_A            8 QILAAIFDMDGLLIDSEPLWDRAELDV-----MASLGVDISRRNE----LPDTLGLRIDMVVDLWYARQPWNGPSRQEVV   78 (226)
T ss_dssp             CCCEEEECCBTTTBCCHHHHHHHHHHH-----HHHTTCCGGGGGG----SCCCTTCCHHHHHHHHHHHSCCSSSCHHHHH
T ss_pred             CCCEEEECCCCCcCcCHHHHHHHHHHH-----HHHcCCCCChHHH----HHHHhCCCHHHHHHHHHHHcCCCccCHHHHH
Confidence            589999999999999998877777663     3445554321000    0000111100     00111110 1111111


Q ss_pred             hhh----hcCCCCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCC
Q 029593           78 GFV----HGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPD  150 (191)
Q Consensus        78 ~~~----~~~~~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~  150 (191)
                      ..+    .+.. .....+.|++.++++.|++.|+   ++||+....++..++.+++..+|+.+++++..+.         
T Consensus        79 ~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~---------  148 (226)
T 1te2_A           79 ERVIARAISLV-EETRPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALASAEKLPY---------  148 (226)
T ss_dssp             HHHHHHHHHHH-HHHCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEECTTSSC---------
T ss_pred             HHHHHHHHHHH-hccCCcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHhhCcEEEeccccCC---------
Confidence            111    1100 1225788999999999999876   8999998889999999999999999999887766         


Q ss_pred             CCCCCCCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          151 EFPVLLKPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       151 ~~~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                           .||++.+++.+++++|++|++|++|||+.||.
T Consensus       149 -----~kp~~~~~~~~~~~~~i~~~~~i~iGD~~nDi  180 (226)
T 1te2_A          149 -----SKPHPQVYLDCAAKLGVDPLTCVALEDSVNGM  180 (226)
T ss_dssp             -----CTTSTHHHHHHHHHHTSCGGGEEEEESSHHHH
T ss_pred             -----CCCChHHHHHHHHHcCCCHHHeEEEeCCHHHH
Confidence                 49999999999999999999999999999985

>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A

Probab=99.87  E-value=1.4e-21  Score=145.08  Aligned_cols=84  Identities=5%  Similarity=-0.021  Sum_probs=75.1

Q ss_pred             CCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhc---CCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHH
Q 029593           88 LIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRL---EIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMD  161 (191)
Q Consensus        88 ~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~---~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~  161 (191)
                      ...++||+.++|+.|+++|+   |+||++...++.+++.+   ++..+|+.++++ +.+ .              ||+|.
T Consensus       128 ~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~~~~l~~~fd~i~~~-~~~-~--------------KP~p~  191 (261)
T 1yns_A          128 KAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFDT-KIG-H--------------KVESE  191 (261)
T ss_dssp             CBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCSEEECG-GGC-C--------------TTCHH
T ss_pred             ccccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhhcccChHhhccEEEec-CCC-C--------------CCCHH
Confidence            46899999999999999886   89999999888888854   599999999988 555 4              99999


Q ss_pred             HHHHHHHHcCCCCCceEEecCccccc
Q 029593          162 AMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       162 ~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      +|+.+++++|++|++|++|||+.+|.
T Consensus       192 ~~~~~~~~lg~~p~~~l~VgDs~~di  217 (261)
T 1yns_A          192 SYRKIADSIGCSTNNILFLTDVTREA  217 (261)
T ss_dssp             HHHHHHHHHTSCGGGEEEEESCHHHH
T ss_pred             HHHHHHHHhCcCcccEEEEcCCHHHH
Confidence            99999999999999999999998763

>3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii}

Probab=99.87  E-value=5e-22  Score=145.68  Aligned_cols=159  Identities=19%  Similarity=0.195  Sum_probs=109.0

Q ss_pred             CceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHH-------Hh--cc------------c-H
Q 029593            4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFK-------AY--GS------------T-L   61 (191)
Q Consensus         4 ~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-------~~--~~------------~-~   61 (191)
                      ++|+|+||+||||+++...+..++.+     ..++.|.+......... +..       ..  +.            . .
T Consensus        14 ~~k~i~fDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (254)
T 3umg_A           14 NVRAVLFDTFGTVVDWRTGIATAVAD-----YAARHQLEVDAVAFADR-WRARYQPSMDAILSGAREFVTLDILHRENLD   87 (254)
T ss_dssp             BCCEEEECCBTTTBCHHHHHHHHHHH-----HHHHTTCCCCHHHHHHH-HHTTHHHHHHHHHTTSSCCCCHHHHHHHHHH
T ss_pred             CceEEEEeCCCceecCchHHHHHHHH-----HHHHhcCCCCHHHHHHH-HHHhHHHHHHHHHhcCCCCCCHHHHHHHHHH
Confidence            58999999999999998888777776     34555655322211110 000       00  00            0 0


Q ss_pred             HHHHHcCC---CCCccchhhhhhcCCCCCCCCCChhHHHHHHhhccCc-E-EEecCChHHHHHHHhhcCCCcccceeeec
Q 029593           62 AGLRALGY---DIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRK-I-IFTNSDRNHAITCLKRLEIADCFDQIICF  136 (191)
Q Consensus        62 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g-~-i~t~~~~~~~~~~l~~~~l~~~f~~i~~~  136 (191)
                      ..+...+.   ....+........   .....++|++.++++.|++.. + ++||++...++..++.+++.  |+.++++
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~~~~~--f~~~~~~  162 (254)
T 3umg_A           88 FVLRESGIDPTNHDSGELDELARA---WHVLTPWPDSVPGLTAIKAEYIIGPLSNGNTSLLLDMAKNAGIP--WDVIIGS  162 (254)
T ss_dssp             HHHHHTTCCGGGSCHHHHHHHHGG---GGSCCBCTTHHHHHHHHHHHSEEEECSSSCHHHHHHHHHHHTCC--CSCCCCH
T ss_pred             HHHHHhCCCcCcCCHHHHHHHHHH---HhhCcCCcCHHHHHHHHHhCCeEEEEeCCCHHHHHHHHHhCCCC--eeEEEEc
Confidence            01111122   1111111111111   234678999999999998752 2 99999999999999999985  8999988


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          137 ETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       137 ~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      +..+.              +||++.+++.+++++|++|++|++|||+.||.
T Consensus       163 ~~~~~--------------~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~Di  199 (254)
T 3umg_A          163 DINRK--------------YKPDPQAYLRTAQVLGLHPGEVMLAAAHNGDL  199 (254)
T ss_dssp             HHHTC--------------CTTSHHHHHHHHHHTTCCGGGEEEEESCHHHH
T ss_pred             CcCCC--------------CCCCHHHHHHHHHHcCCChHHEEEEeCChHhH
Confidence            87776              49999999999999999999999999999984

>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens}

Probab=99.86  E-value=4.3e-22  Score=147.78  Aligned_cols=162  Identities=18%  Similarity=0.152  Sum_probs=110.8

Q ss_pred             ceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHH--HHHHHH----HHHHHh-------cccH---------H
Q 029593            5 FNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETK--ASSLRV----ELFKAY-------GSTL---------A   62 (191)
Q Consensus         5 ~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~----~~~~~~-------~~~~---------~   62 (191)
                      +|+|+||+||||+++...+..++..     +++..|.....  ......    .....+       |...         .
T Consensus         1 ik~iiFDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~   75 (263)
T 3k1z_A            1 MRLLTWDVKDTLLRLRHPLGEAYAT-----KARAHGLEVEPSALEQGFRQAYRAQSHSFPNYGLSHGLTSRQWWLDVVLQ   75 (263)
T ss_dssp             CCEEEECCBTTTEEESSCHHHHHHH-----HHHHTTCCCCHHHHHHHHHHHHHHHHHHSTGGGGGGTCCHHHHHHHHHHH
T ss_pred             CcEEEEcCCCceeCCCCCHHHHHHH-----HHHHhCCCCCHHHHHHHHHHHHHHhhhhccccccccCCCHHHHHHHHHHH
Confidence            5899999999999988777667765     45666764221  111110    011111       1100         0


Q ss_pred             HHHHcCCCCCccch----hhhhhcCCCCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeee
Q 029593           63 GLRALGYDIGADDY----HGFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIIC  135 (191)
Q Consensus        63 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~  135 (191)
                      .+...+. ...+.+    ...+........+.++|++.++++.|+++|+   ++||+... ++..++.+|+..+|+.+++
T Consensus        76 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~-~~~~l~~~gl~~~f~~~~~  153 (263)
T 3k1z_A           76 TFHLAGV-QDAQAVAPIAEQLYKDFSHPCTWQVLDGAEDTLRECRTRGLRLAVISNFDRR-LEGILGGLGLREHFDFVLT  153 (263)
T ss_dssp             HHHHTTC-CCHHHHHHHHHHHHHHTTSGGGEEECTTHHHHHHHHHHTTCEEEEEESCCTT-HHHHHHHTTCGGGCSCEEE
T ss_pred             HHHHcCC-CCHHHHHHHHHHHHHHhcCcccceECcCHHHHHHHHHhCCCcEEEEeCCcHH-HHHHHHhCCcHHhhhEEEe
Confidence            1111111 122222    1122222222335789999999999999987   89997764 6889999999999999999


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHcCCCCCceEEecCcc-ccc
Q 029593          136 FETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHAVRQSSFL-IFY  187 (191)
Q Consensus       136 ~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~-~~~  187 (191)
                      ++..+.              +||+|.++..+++++|++|++|++|||++ ||.
T Consensus       154 ~~~~~~--------------~Kp~~~~~~~~~~~~g~~~~~~~~vGD~~~~Di  192 (263)
T 3k1z_A          154 SEAAGW--------------PKPDPRIFQEALRLAHMEPVVAAHVGDNYLCDY  192 (263)
T ss_dssp             HHHHSS--------------CTTSHHHHHHHHHHHTCCGGGEEEEESCHHHHT
T ss_pred             ecccCC--------------CCCCHHHHHHHHHHcCCCHHHEEEECCCcHHHH
Confidence            988776              49999999999999999999999999997 874

>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6

Probab=99.86  E-value=3.8e-22  Score=144.41  Aligned_cols=161  Identities=20%  Similarity=0.174  Sum_probs=110.2

Q ss_pred             CCCCceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccHH-----HHHHcCCCCCccc
Q 029593            1 MDSPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLA-----GLRALGYDIGADD   75 (191)
Q Consensus         1 M~~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~   75 (191)
                      |+ ++|+|+||+||||+++...+..++.+     .+++.|.+.......    ....+....     .....+.....+.
T Consensus         1 M~-~ik~i~fDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~~~~~~~   70 (229)
T 2fdr_A            1 MS-GFDLIIFDCDGVLVDSEIIAAQVESR-----LLTEAGYPISVEEMG----ERFAGMTWKNILLQVESEASIPLSASL   70 (229)
T ss_dssp             ---CCSEEEECSBTTTBCCHHHHHHHHHH-----HHHHTTCCCCHHHHH----HHHTTCCHHHHHHHHHHHHCCCCCTHH
T ss_pred             CC-CccEEEEcCCCCcCccHHHHHHHHHH-----HHHHhCCCCCHHHHH----HHHhCCCHHHHHHHHHHHcCCCCCHHH
Confidence            44 48999999999999999877777766     345556653311111    111111111     1111222222111


Q ss_pred             ---hhhhhhcCCCCCCCCCChhHHHHHHhhccCcE-EEecCChHHHHHHHhhcCCCccc-ceeeecccCCCCCCCCCCCC
Q 029593           76 ---YHGFVHGRLPYDLIKPDPQLRNLLCSITQRKI-IFTNSDRNHAITCLKRLEIADCF-DQIICFETMNPNLSKATRPD  150 (191)
Q Consensus        76 ---~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~-i~t~~~~~~~~~~l~~~~l~~~f-~~i~~~~~~~~~~~~~~~~~  150 (191)
                         +...+.... .....++|++.++++.|+. .+ ++||+....++..++.+++..+| +.+++++..+.         
T Consensus        71 ~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~-~~~i~s~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~---------  139 (229)
T 2fdr_A           71 LDKSEKLLDMRL-ERDVKIIDGVKFALSRLTT-PRCICSNSSSHRLDMMLTKVGLKPYFAPHIYSAKDLGA---------  139 (229)
T ss_dssp             HHHHHHHHHHHH-HHHCCBCTTHHHHHHHCCS-CEEEEESSCHHHHHHHHHHTTCGGGTTTCEEEHHHHCT---------
T ss_pred             HHHHHHHHHHHh-hcCCccCcCHHHHHHHhCC-CEEEEECCChhHHHHHHHhCChHHhccceEEecccccc---------
Confidence               111111110 1235788999999999987 55 99999999999999999999999 88888887654         


Q ss_pred             CCCCCC--CCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          151 EFPVLL--KPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       151 ~~~~~~--kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                           +  ||++.+++.+++++|++|++|++|||+.||.
T Consensus       140 -----~~~kpk~~~~~~~~~~l~~~~~~~i~iGD~~~Di  173 (229)
T 2fdr_A          140 -----DRVKPKPDIFLHGAAQFGVSPDRVVVVEDSVHGI  173 (229)
T ss_dssp             -----TCCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHH
T ss_pred             -----CCCCcCHHHHHHHHHHcCCChhHeEEEcCCHHHH
Confidence                 6  9999999999999999999999999999984

>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}

Probab=99.86  E-value=3.4e-22  Score=143.96  Aligned_cols=161  Identities=21%  Similarity=0.229  Sum_probs=110.0

Q ss_pred             CCceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccHHHH-HHcCCCCCccc------
Q 029593            3 SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGL-RALGYDIGADD------   75 (191)
Q Consensus         3 ~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~------   75 (191)
                      |++|+|+||+||||+++...+..++.++     .++.|........    +....+...... ..+........      
T Consensus         4 M~~k~v~fDlDGTL~d~~~~~~~~~~~~-----~~~~g~~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~   74 (225)
T 3d6j_A            4 MKYTVYLFDFDYTLADSSRGIVTCFRSV-----LERHGYTGITDDM----IKRTIGKTLEESFSILTGITDADQLESFRQ   74 (225)
T ss_dssp             -CCSEEEECCBTTTEECHHHHHHHHHHH-----HHHTTCCCCCHHH----HHTTTTSCHHHHHHHHHCCCCHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCCCCCHHHHHHHHHHH-----HHHhCCCCCCHHH----HHHHhCCcHHHHHHHHcCCCCHHHHHHHHH
Confidence            3579999999999999998877777763     3445554221111    111112211111 11100001111      


Q ss_pred             -hhhhhhcCCCCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCC
Q 029593           76 -YHGFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDE  151 (191)
Q Consensus        76 -~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~  151 (191)
                       +...+... ......+.|++.++++.|++.|+   ++|++....++..++.+++..+|+.+++++....          
T Consensus        75 ~~~~~~~~~-~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------  143 (225)
T 3d6j_A           75 EYSKEADIY-MNANTILFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPDDWFDIIIGGEDVTH----------  143 (225)
T ss_dssp             HHHHHHHHH-TGGGCEECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCTTCCSEEECGGGCSS----------
T ss_pred             HHHHHHHHh-ccccCccCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCchhheeeeeehhhcCC----------
Confidence             11111111 11235678999999999998775   8899998899999999999999999998887765          


Q ss_pred             CCCCCCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          152 FPVLLKPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       152 ~~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                          +||++.++..+++++|++|+++++|||+.||.
T Consensus       144 ----~k~~~~~~~~~~~~~~~~~~~~i~iGD~~nDi  175 (225)
T 3d6j_A          144 ----HKPDPEGLLLAIDRLKACPEEVLYIGDSTVDA  175 (225)
T ss_dssp             ----CTTSTHHHHHHHHHTTCCGGGEEEEESSHHHH
T ss_pred             ----CCCChHHHHHHHHHhCCChHHeEEEcCCHHHH
Confidence                49999999999999999999999999999985

>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A

Probab=99.86  E-value=4.7e-21  Score=139.08  Aligned_cols=84  Identities=29%  Similarity=0.302  Sum_probs=78.1

Q ss_pred             CCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q 029593           89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKL  165 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~  165 (191)
                      ..++|++.++++.|+++ +   ++||++...++..++.+++..+|+.+++++..+.              +||+|.+++.
T Consensus        99 ~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~~~f~~~~~~~~~~~--------------~kp~~~~~~~  163 (234)
T 3u26_A           99 GELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDALGIKDLFDSITTSEEAGF--------------FKPHPRIFEL  163 (234)
T ss_dssp             CCBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEHHHHTB--------------CTTSHHHHHH
T ss_pred             CCcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHcCcHHHcceeEeccccCC--------------CCcCHHHHHH
Confidence            67889999999999987 5   9999999999999999999999999999988776              4999999999


Q ss_pred             HHHHcCCCCCceEEecCcc-ccc
Q 029593          166 ALHVANVDPRHAVRQSSFL-IFY  187 (191)
Q Consensus       166 ~~~~~~~~p~~~i~iGDs~-~~~  187 (191)
                      +++++|++|++|++|||++ ||.
T Consensus       164 ~~~~~~~~~~~~~~vGD~~~~Di  186 (234)
T 3u26_A          164 ALKKAGVKGEEAVYVGDNPVKDC  186 (234)
T ss_dssp             HHHHHTCCGGGEEEEESCTTTTH
T ss_pred             HHHHcCCCchhEEEEcCCcHHHH
Confidence            9999999999999999998 984

>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A

Probab=99.86  E-value=4.6e-22  Score=143.11  Aligned_cols=157  Identities=19%  Similarity=0.206  Sum_probs=106.0

Q ss_pred             ceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHHhcccHH-----HHHHcCCCCCccchhh
Q 029593            5 FNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFS-ETKASSLRVELFKAYGSTLA-----GLRALGYDIGADDYHG   78 (191)
Q Consensus         5 ~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~   78 (191)
                      +|+|+||+||||+++...+..++.++     .++.|.. .....     .....|....     .....+.....+....
T Consensus         2 ~k~i~fDlDGTL~d~~~~~~~~~~~~-----~~~~g~~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~   71 (221)
T 2wf7_A            2 FKAVLFDLDGVITDTAEYHFRAWKAL-----AEEIGINGVDRQF-----NEQLKGVSREDSLQKILDLADKKVSAEEFKE   71 (221)
T ss_dssp             CCEEEECCBTTTBTHHHHHHHHHHHH-----HHHTTCCCCSHHH-----HTTTTTCCHHHHHHHHHHHTTCCCCHHHHHH
T ss_pred             CcEEEECCCCcccCChHHHHHHHHHH-----HHHcCCCCCCHHH-----HHHhCCCCHHHHHHHHHHHhCCCCChHHHHH
Confidence            68999999999999998887777764     3445554 21111     0011111111     1111111122211111


Q ss_pred             -------hhhcCCC-CCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCC
Q 029593           79 -------FVHGRLP-YDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKAT  147 (191)
Q Consensus        79 -------~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~  147 (191)
                             .+..... .....+.|++.++++.|++.|+   ++||+  ...+..++.+++..+|+.+++++..+.      
T Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~~~l~~~f~~~~~~~~~~~------  143 (221)
T 2wf7_A           72 LAKRKNDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNLTGYFDAIADPAEVAA------  143 (221)
T ss_dssp             HHHHHHHHHHHHGGGCCGGGBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHHTTCGGGCSEECCTTTSSS------
T ss_pred             HHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHHcChHHHcceEeccccCCC------
Confidence                   1111110 1235678999999999999886   77776  456778889999999999999888776      


Q ss_pred             CCCCCCCCCCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          148 RPDEFPVLLKPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       148 ~~~~~~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                              +||+|.+++.+++++|++|++|++|||+.||.
T Consensus       144 --------~Kp~~~~~~~~~~~lgi~~~~~i~iGD~~nDi  175 (221)
T 2wf7_A          144 --------SKPAPDIFIAAAHAVGVAPSESIGLEDSQAGI  175 (221)
T ss_dssp             --------CTTSSHHHHHHHHHTTCCGGGEEEEESSHHHH
T ss_pred             --------CCCChHHHHHHHHHcCCChhHeEEEeCCHHHH
Confidence                    49999999999999999999999999999984

>1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A

Probab=99.86  E-value=3.1e-21  Score=142.17  Aligned_cols=84  Identities=21%  Similarity=0.304  Sum_probs=77.4

Q ss_pred             CCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHH
Q 029593           88 LIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMK  164 (191)
Q Consensus        88 ~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~  164 (191)
                      ...++|++.++++.|+  |+   ++||++...++..++.+|+..+|+.+++++..+.              +||+|.+++
T Consensus        91 ~~~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~--------------~Kp~~~~~~  154 (253)
T 1qq5_A           91 RLTPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSFDAVISVDAKRV--------------FKPHPDSYA  154 (253)
T ss_dssp             SCCBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGGTC--------------CTTSHHHHH
T ss_pred             cCCCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHHCCchhhccEEEEccccCC--------------CCCCHHHHH
Confidence            3678999999999999  64   9999999999999999999999999999988776              499999999


Q ss_pred             HHHHHcCCCCCceEEecCccccc
Q 029593          165 LALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       165 ~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      .+++++|++|++|++|||+.||.
T Consensus       155 ~~~~~~~~~~~~~~~vGD~~~Di  177 (253)
T 1qq5_A          155 LVEEVLGVTPAEVLFVSSNGFDV  177 (253)
T ss_dssp             HHHHHHCCCGGGEEEEESCHHHH
T ss_pred             HHHHHcCCCHHHEEEEeCChhhH
Confidence            99999999999999999999884

>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*

Probab=99.85  E-value=3e-22  Score=143.09  Aligned_cols=150  Identities=21%  Similarity=0.255  Sum_probs=104.9

Q ss_pred             CC-CCceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccHH-HHHHcCCCCCccchhh
Q 029593            1 MD-SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLA-GLRALGYDIGADDYHG   78 (191)
Q Consensus         1 M~-~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~   78 (191)
                      |. +++|+|+||+||||+++...+.    .     +.+..|.+......  . .......... .....     ...+..
T Consensus         1 M~~~~~k~iifDlDGTL~d~~~~~~----~-----~~~~~g~~~~~~~~--~-~~~~~~~~~~~~~~~~-----~~~~~~   63 (205)
T 3m9l_A            1 MSLSEIKHWVFDMDGTLTIAVHDFA----A-----IREALSIPAEDDIL--T-HLAALPADESAAKHAW-----LLEHER   63 (205)
T ss_dssp             CCGGGCCEEEECTBTTTEEEEECHH----H-----HHHHTTCCTTSCHH--H-HHHHSCHHHHHHHHHH-----HHHTHH
T ss_pred             CCcccCCEEEEeCCCcCcccHHHHH----H-----HHHHhCCCchHHHH--H-HHhcCChHHHHHHHHH-----HHHHHH
Confidence            45 3689999999999999876443    2     34556665431110  0 1111111000 00000     001111


Q ss_pred             hhhcCCCCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCccc--ceeeecccCCCCCCCCCCCCCCC
Q 029593           79 FVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCF--DQIICFETMNPNLSKATRPDEFP  153 (191)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f--~~i~~~~~~~~~~~~~~~~~~~~  153 (191)
                      .+     .....+.|++.++++.|+++|+   ++||+....++..++.+|+..+|  +.+++.+. +.            
T Consensus        64 ~~-----~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~i~~~~~-~~------------  125 (205)
T 3m9l_A           64 DL-----AQGSRPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCFAEADVLGRDE-AP------------  125 (205)
T ss_dssp             HH-----EEEEEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGSCGGGEECTTT-SC------------
T ss_pred             HH-----hhcCCCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhcCcceEEeCCC-CC------------
Confidence            11     1225788999999999999986   99999999999999999999999  77887765 44            


Q ss_pred             CCCCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          154 VLLKPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       154 ~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                        +||++.+++.+++++|++|++|++|||+.||.
T Consensus       126 --~kp~~~~~~~~~~~~g~~~~~~i~iGD~~~Di  157 (205)
T 3m9l_A          126 --PKPHPGGLLKLAEAWDVSPSRMVMVGDYRFDL  157 (205)
T ss_dssp             --CTTSSHHHHHHHHHTTCCGGGEEEEESSHHHH
T ss_pred             --CCCCHHHHHHHHHHcCCCHHHEEEECCCHHHH
Confidence              59999999999999999999999999999984

>3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0

Probab=99.85  E-value=1.6e-21  Score=140.24  Aligned_cols=95  Identities=7%  Similarity=0.027  Sum_probs=76.9

Q ss_pred             CCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q 029593           89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKL  165 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~  165 (191)
                      ..+.|++.++++.|+++|+   ++||+....++..++.+|+..+|+.+++.++....   +.. +.....+||+|.+++.
T Consensus        74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~---~~~-~~~~~~~k~k~~~~~~  149 (217)
T 3m1y_A           74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAFSNTLIVENDALN---GLV-TGHMMFSHSKGEMLLV  149 (217)
T ss_dssp             CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEEE---EEE-EESCCSTTHHHHHHHH
T ss_pred             CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcchhccceeEEeCCEEE---eee-ccCCCCCCChHHHHHH
Confidence            6799999999999999987   99999999999999999999999988754431100   000 0011236999999999


Q ss_pred             HHHHcCCCCCceEEecCccccc
Q 029593          166 ALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       166 ~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      +++++|++|++|++|||+.||.
T Consensus       150 ~~~~~g~~~~~~i~vGDs~~Di  171 (217)
T 3m1y_A          150 LQRLLNISKTNTLVVGDGANDL  171 (217)
T ss_dssp             HHHHHTCCSTTEEEEECSGGGH
T ss_pred             HHHHcCCCHhHEEEEeCCHHHH
Confidence            9999999999999999999985

>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6

Probab=99.85  E-value=1.3e-21  Score=142.03  Aligned_cols=161  Identities=17%  Similarity=0.125  Sum_probs=107.5

Q ss_pred             CceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccHHH-----HHHcCCCCC-----c
Q 029593            4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAG-----LRALGYDIG-----A   73 (191)
Q Consensus         4 ~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~-----~   73 (191)
                      ++|+|+||+||||++++..+..++.+++.+.    .|.+...  .    .....|.....     +..++....     .
T Consensus         3 ~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~----~g~~~~~--~----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~   72 (234)
T 2hcf_A            3 SRTLVLFDIDGTLLKVESMNRRVLADALIEV----YGTEGST--G----SHDFSGKMDGAIIYEVLSNVGLERAEIADKF   72 (234)
T ss_dssp             CCEEEEECCBTTTEEECTHHHHHHHHHHHHH----HSCCCCC---------CCTTCCHHHHHHHHHHTTTCCHHHHHHHH
T ss_pred             cceEEEEcCCCCcccCccchHHHHHHHHHHH----hCCCCcc--c----hhhhcCCChHHHHHHHHHHcCCCcccchhHH
Confidence            4799999999999999988877777644331    3433210  0    00111111110     111111101     0


Q ss_pred             cc----hhhhhhcCCCCCCCCCChhHHHHHHhhccC-cE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCC
Q 029593           74 DD----YHGFVHGRLPYDLIKPDPQLRNLLCSITQR-KI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSK  145 (191)
Q Consensus        74 ~~----~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~  145 (191)
                      ..    +...+..........+.|++.++++.|+++ |+   ++||+....++..++.+++..+|+.++++++...    
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~----  148 (234)
T 2hcf_A           73 DKAKETYIALFRERARREDITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPFGAFADDALD----  148 (234)
T ss_dssp             HHHHHHHHHHHHHHCCGGGEEECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCSCEECTTTCSS----
T ss_pred             HHHHHHHHHHHHHHhccCCCCcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCchhhcCcceecCCCcC----
Confidence            11    111111111113357889999999999999 87   9999999999999999999999998777665432    


Q ss_pred             CCCCCCCCCCCCCCHHHHHHHHHHcC--CCCCceEEecCccccc
Q 029593          146 ATRPDEFPVLLKPSMDAMKLALHVAN--VDPRHAVRQSSFLIFY  187 (191)
Q Consensus       146 ~~~~~~~~~~~kp~~~~~~~~~~~~~--~~p~~~i~iGDs~~~~  187 (191)
                               .+||.+.+++.+++++|  ++|++|++|||+.||.
T Consensus       149 ---------~~k~~~~~~~~~~~~lg~~~~~~~~i~iGD~~~Di  183 (234)
T 2hcf_A          149 ---------RNELPHIALERARRMTGANYSPSQIVIIGDTEHDI  183 (234)
T ss_dssp             ---------GGGHHHHHHHHHHHHHCCCCCGGGEEEEESSHHHH
T ss_pred             ---------ccchHHHHHHHHHHHhCCCCCcccEEEECCCHHHH
Confidence                     24788999999999999  9999999999999984

>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis}

Probab=99.85  E-value=6.6e-22  Score=141.69  Aligned_cols=84  Identities=11%  Similarity=0.105  Sum_probs=76.8

Q ss_pred             CCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhh------cCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCC
Q 029593           89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKR------LEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPS  159 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~------~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~  159 (191)
                      ..++|++.++++.|++ |+   ++||++...++..++.      +++..+|+.+++++..+.              +||+
T Consensus        88 ~~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~l~~~~~~~l~~~f~~~~~~~~~~~--------------~Kp~  152 (211)
T 2i6x_A           88 EEISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSPRFLPSGRTLDSFFDKVYASCQMGK--------------YKPN  152 (211)
T ss_dssp             EEECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTSTTSSTTCCCGGGGSSEEEEHHHHTC--------------CTTS
T ss_pred             cccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhhhccccccCHHHHcCeEEeecccCC--------------CCCC
Confidence            4678999999999998 76   9999999999999998      899999999999887776              4999


Q ss_pred             HHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          160 MDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       160 ~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      |.+++.+++++|++|++|++|||+.||.
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~igD~~~Di  180 (211)
T 2i6x_A          153 EDIFLEMIADSGMKPEETLFIDDGPANV  180 (211)
T ss_dssp             HHHHHHHHHHHCCCGGGEEEECSCHHHH
T ss_pred             HHHHHHHHHHhCCChHHeEEeCCCHHHH
Confidence            9999999999999999999999999984

>2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae}

Probab=99.85  E-value=1.6e-21  Score=145.68  Aligned_cols=157  Identities=17%  Similarity=0.132  Sum_probs=108.2

Q ss_pred             ceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhC-CCHHHHHHHHHHHHHHhcccHH-HHHHcCCCCCccchhhhhhc
Q 029593            5 FNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCG-FSETKASSLRVELFKAYGSTLA-GLRALGYDIGADDYHGFVHG   82 (191)
Q Consensus         5 ~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~   82 (191)
                      +|+|+||+||||+++...+..++.+     ..+..| .+....      .....|.... ....+........+...+..
T Consensus        35 ik~iifDlDGTLlds~~~~~~~~~~-----~~~~~g~~~~~~~------~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~  103 (275)
T 2qlt_A           35 INAALFDVDGTIIISQPAIAAFWRD-----FGKDKPYFDAEHV------IHISHGWRTYDAIAKFAPDFADEEYVNKLEG  103 (275)
T ss_dssp             ESEEEECCBTTTEECHHHHHHHHHH-----HHTTCTTCCHHHH------HHHCTTCCHHHHHHHHCGGGCCHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCCHHHHHHHHHH-----HHHHcCCCCHHHH------HHHhcCCCHHHHHHHHhccCCcHHHHHHHHH
Confidence            7999999999999999887777766     345555 332211      1111122221 11111111111111111111


Q ss_pred             C---CCCCCCCCChhHHHHHHhhccC-cE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCC
Q 029593           83 R---LPYDLIKPDPQLRNLLCSITQR-KI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVL  155 (191)
Q Consensus        83 ~---~~~~~~~~~~~~~~~l~~l~~~-g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~  155 (191)
                      .   .......+.|++.++++.|++. |+   ++||+....++..++.+++. .|+.++++++...              
T Consensus       104 ~~~~~~~~~~~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l~-~f~~i~~~~~~~~--------------  168 (275)
T 2qlt_A          104 EIPEKYGEHSIEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKIK-RPEYFITANDVKQ--------------  168 (275)
T ss_dssp             THHHHHCTTCEECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTCC-CCSSEECGGGCSS--------------
T ss_pred             HHHHHHhcCCCcCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCCC-ccCEEEEcccCCC--------------
Confidence            1   0123367889999999999998 75   99999999999999999886 4788888887666              


Q ss_pred             CCCCHHHHHHHHHHcCC-------CCCceEEecCccccc
Q 029593          156 LKPSMDAMKLALHVANV-------DPRHAVRQSSFLIFY  187 (191)
Q Consensus       156 ~kp~~~~~~~~~~~~~~-------~p~~~i~iGDs~~~~  187 (191)
                      +||+|.++..+++.+|+       +|++|++|||+.||.
T Consensus       169 ~kp~~~~~~~~~~~lgi~~~~~~~~~~~~i~~GDs~nDi  207 (275)
T 2qlt_A          169 GKPHPEPYLKGRNGLGFPINEQDPSKSKVVVFEDAPAGI  207 (275)
T ss_dssp             CTTSSHHHHHHHHHTTCCCCSSCGGGSCEEEEESSHHHH
T ss_pred             CCCChHHHHHHHHHcCCCccccCCCcceEEEEeCCHHHH
Confidence            49999999999999999       999999999999984

>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A

Probab=99.85  E-value=2.3e-21  Score=143.70  Aligned_cols=161  Identities=13%  Similarity=0.048  Sum_probs=108.0

Q ss_pred             CCceEEEEecCCCCCCChH-HHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccHH---------------HHHH
Q 029593            3 SPFNCLVFDLDDTLYPSET-GIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLA---------------GLRA   66 (191)
Q Consensus         3 ~~~k~iifD~DGTL~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~---------------~~~~   66 (191)
                      |++|+|+||+||||+++.. .+..++..+     +++.|++..... .    ....+....               ....
T Consensus         4 m~ik~i~fDlDGTLld~~~~~~~~~~~~~-----l~~~G~~~~~~~-~----~~~~g~~~~~~~~~~~~~~~~~~~~~~~   73 (267)
T 1swv_A            4 MKIEAVIFAWAGTTVDYGCFAPLEVFMEI-----FHKRGVAITAEE-A----RKPMGLLKIDHVRALTEMPRIASEWNRV   73 (267)
T ss_dssp             -CCCEEEECSBTTTBSTTCCTTHHHHHHH-----HHTTTCCCCHHH-H----HTTTTSCHHHHHHHHHHSHHHHHHHHHH
T ss_pred             CCceEEEEecCCCEEeCCCccHHHHHHHH-----HHHcCCCCCHHH-H----HHHhccchHHHHHHhcccHHHHHHHHHH
Confidence            4589999999999999887 566667663     344555422111 0    000111000               0011


Q ss_pred             cCCCCCccchhh---hhhc---CCCCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCccc-ceeeec
Q 029593           67 LGYDIGADDYHG---FVHG---RLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCF-DQIICF  136 (191)
Q Consensus        67 ~~~~~~~~~~~~---~~~~---~~~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f-~~i~~~  136 (191)
                      .+.....+.+..   .+..   ........++|++.+++..|+++|+   ++||+....+...++.+++..+| +.++++
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~~~~~~  153 (267)
T 1swv_A           74 FRQLPTEADIQEMYEEFEEILFAILPRYASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTP  153 (267)
T ss_dssp             HSSCCCHHHHHHHHHHHHHHHHHHGGGGCCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCCSCCBCG
T ss_pred             hCCCCCHHHHHHHHHHHHHHHHHhhccccccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCcccChHheecC
Confidence            122222221111   1100   0012235788999999999999886   88999888889999998888885 888888


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHcCCCC-CceEEecCccccc
Q 029593          137 ETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDP-RHAVRQSSFLIFY  187 (191)
Q Consensus       137 ~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~p-~~~i~iGDs~~~~  187 (191)
                      +....              +||+|.++..+++++|++| ++|++|||+.||.
T Consensus       154 ~~~~~--------------~kp~~~~~~~~~~~lgi~~~~~~i~iGD~~nDi  191 (267)
T 1swv_A          154 DDVPA--------------GRPYPWMCYKNAMELGVYPMNHMIKVGDTVSDM  191 (267)
T ss_dssp             GGSSC--------------CTTSSHHHHHHHHHHTCCSGGGEEEEESSHHHH
T ss_pred             CccCC--------------CCCCHHHHHHHHHHhCCCCCcCEEEEeCCHHHH
Confidence            87765              4999999999999999999 9999999999985

>3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV}

Probab=99.83  E-value=4.7e-20  Score=133.50  Aligned_cols=81  Identities=25%  Similarity=0.304  Sum_probs=72.4

Q ss_pred             CCCCChhHHHHHHhhccCcE--EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q 029593           88 LIKPDPQLRNLLCSITQRKI--IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKL  165 (191)
Q Consensus        88 ~~~~~~~~~~~l~~l~~~g~--i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~  165 (191)
                      ...++|++.++++.|+++..  ++||++..     ++.+++..+|+.+++++..+.              +||+|.+++.
T Consensus       103 ~~~~~~~~~~~l~~l~~~~~~~i~t~~~~~-----l~~~~l~~~f~~~~~~~~~~~--------------~kp~~~~~~~  163 (230)
T 3vay_A          103 QVQIFPEVQPTLEILAKTFTLGVITNGNAD-----VRRLGLADYFAFALCAEDLGI--------------GKPDPAPFLE  163 (230)
T ss_dssp             CCCBCTTHHHHHHHHHTTSEEEEEESSCCC-----GGGSTTGGGCSEEEEHHHHTC--------------CTTSHHHHHH
T ss_pred             cCccCcCHHHHHHHHHhCCeEEEEECCchh-----hhhcCcHHHeeeeEEccccCC--------------CCcCHHHHHH
Confidence            46899999999999988732  89998775     788999999999999988776              4999999999


Q ss_pred             HHHHcCCCCCceEEecCcc-ccc
Q 029593          166 ALHVANVDPRHAVRQSSFL-IFY  187 (191)
Q Consensus       166 ~~~~~~~~p~~~i~iGDs~-~~~  187 (191)
                      +++.+|++|++|++|||++ ||.
T Consensus       164 ~~~~~~~~~~~~~~vGD~~~~Di  186 (230)
T 3vay_A          164 ALRRAKVDASAAVHVGDHPSDDI  186 (230)
T ss_dssp             HHHHHTCCGGGEEEEESCTTTTH
T ss_pred             HHHHhCCCchheEEEeCChHHHH
Confidence            9999999999999999998 884

>2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A

Probab=99.83  E-value=1.3e-21  Score=139.39  Aligned_cols=81  Identities=22%  Similarity=0.212  Sum_probs=74.2

Q ss_pred             CCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q 029593           89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKL  165 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~  165 (191)
                      ..++|++.+ ++.|+++ +   ++||++...++..++.+|+..+|+.+++++..+.              +||+|.++..
T Consensus        73 ~~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~--------------~Kp~~~~~~~  136 (201)
T 2w43_A           73 LKAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLERNGLLRYFKGIFSAESVKE--------------YKPSPKVYKY  136 (201)
T ss_dssp             CEECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGGTC--------------CTTCHHHHHH
T ss_pred             cccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHHCCcHHhCcEEEehhhcCC--------------CCCCHHHHHH
Confidence            678999999 9999876 5   9999999999999999999999999999888776              4999999999


Q ss_pred             HHHHcCCCCCceEEecCccccc
Q 029593          166 ALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       166 ~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      +++++|  |++|++|||+.||.
T Consensus       137 ~~~~~~--~~~~~~vGD~~~Di  156 (201)
T 2w43_A          137 FLDSIG--AKEAFLVSSNAFDV  156 (201)
T ss_dssp             HHHHHT--CSCCEEEESCHHHH
T ss_pred             HHHhcC--CCcEEEEeCCHHHh
Confidence            999999  99999999999974

>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2

Probab=99.82  E-value=1.8e-21  Score=138.90  Aligned_cols=85  Identities=16%  Similarity=0.222  Sum_probs=75.2

Q ss_pred             CCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhh-cCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHH
Q 029593           89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKR-LEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMK  164 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~-~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~  164 (191)
                      ..+.|++.++++.|+++|+   ++||++...+...++. +|+..+|+.+++++..+.              .||+|.++.
T Consensus        90 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~--------------~Kp~~~~~~  155 (206)
T 2b0c_A           90 VALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQDLGM--------------RKPEARIYQ  155 (206)
T ss_dssp             EEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHCSEEEEHHHHTC--------------CTTCHHHHH
T ss_pred             cccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhccChhhheeeEEEecccCC--------------CCCCHHHHH
Confidence            4688999999999998886   9999888777766666 788888999999887766              499999999


Q ss_pred             HHHHHcCCCCCceEEecCccccc
Q 029593          165 LALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       165 ~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      .+++++|++|++|++|||+.+|.
T Consensus       156 ~~~~~~~~~~~~~~~vgD~~~Di  178 (206)
T 2b0c_A          156 HVLQAEGFSPSDTVFFDDNADNI  178 (206)
T ss_dssp             HHHHHHTCCGGGEEEEESCHHHH
T ss_pred             HHHHHcCCCHHHeEEeCCCHHHH
Confidence            99999999999999999999984

>2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22

Probab=99.82  E-value=5.6e-20  Score=135.70  Aligned_cols=82  Identities=7%  Similarity=0.047  Sum_probs=67.1

Q ss_pred             CCCCChhHHHHHHhhccCcE-EEecCChHHHHHHHhhc--C---------CCcccceeeecccCCCCCCCCCCCCCCCCC
Q 029593           88 LIKPDPQLRNLLCSITQRKI-IFTNSDRNHAITCLKRL--E---------IADCFDQIICFETMNPNLSKATRPDEFPVL  155 (191)
Q Consensus        88 ~~~~~~~~~~~l~~l~~~g~-i~t~~~~~~~~~~l~~~--~---------l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~  155 (191)
                      ...++||+.++|+.  ...+ |+||++...++..++..  |         +..+|+.++.+...+               
T Consensus       123 ~~~~~pgv~e~L~~--g~~l~i~Tn~~~~~~~~~l~~~~~g~~~~~~~l~l~~~~~~~f~~~~~g---------------  185 (253)
T 2g80_A          123 KAPVYADAIDFIKR--KKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSYIDGYFDINTSG---------------  185 (253)
T ss_dssp             CBCCCHHHHHHHHH--CSCEEEECSSCHHHHHHHHHSBCCTTCTTSCCBCCGGGCCEEECHHHHC---------------
T ss_pred             cCCCCCCHHHHHHc--CCEEEEEeCCCHHHHHHHHHhhcccccccccccchHhhcceEEeeeccC---------------
Confidence            36789999999998  3334 99999999999988876  4         666677766552213               


Q ss_pred             CCCCHHHHHHHHHHcCCCCCceEEecCcccc
Q 029593          156 LKPSMDAMKLALHVANVDPRHAVRQSSFLIF  186 (191)
Q Consensus       156 ~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~  186 (191)
                      +||+|++|..+++++|++|++|++|||+.+|
T Consensus       186 ~KP~p~~~~~a~~~lg~~p~~~l~vgDs~~d  216 (253)
T 2g80_A          186 KKTETQSYANILRDIGAKASEVLFLSDNPLE  216 (253)
T ss_dssp             CTTCHHHHHHHHHHHTCCGGGEEEEESCHHH
T ss_pred             CCCCHHHHHHHHHHcCCCcccEEEEcCCHHH
Confidence            3999999999999999999999999999876

>4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp}

Probab=99.81  E-value=2.6e-20  Score=141.69  Aligned_cols=164  Identities=10%  Similarity=0.034  Sum_probs=105.7

Q ss_pred             CCceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccHHHHH---HcCCCCCccchhhh
Q 029593            3 SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLR---ALGYDIGADDYHGF   79 (191)
Q Consensus         3 ~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~   79 (191)
                      ++.|+|+||+||||++++....          +....|..... .................+.   ........+.+...
T Consensus       106 ~~~kaviFDlDGTLid~~~~~~----------la~~~g~~~~~-~~~~~~~~~g~~~~~~~l~~~~~~l~~~~~~~i~~~  174 (317)
T 4eze_A          106 PANGIIAFDMDSTFIAEEGVDE----------IARELGMSTQI-TAITQQAMEGKLDFNASFTRRIGMLKGTPKAVLNAV  174 (317)
T ss_dssp             CCSCEEEECTBTTTBSSCHHHH----------HHHHTTCHHHH-HHHHHHHHTTSSCHHHHHHHHHHTTTTCBHHHHHHH
T ss_pred             CCCCEEEEcCCCCccCCccHHH----------HHHHhCCcHHH-HHHHHHHhcCCCCHHHHHHHHHHHhcCCCHHHHHHH
Confidence            3689999999999999985311          33445553322 1111111111000011111   11112222222323


Q ss_pred             hhcCCCCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCC
Q 029593           80 VHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLL  156 (191)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~  156 (191)
                      ...      +.+.||+.++++.|+++|+   |+||+....++.+++.+|+..+|+.++..++...   ++.+ ......+
T Consensus       175 ~~~------~~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~~f~~~l~~~dg~~---tg~i-~~~~~~~  244 (317)
T 4eze_A          175 CDR------MTLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFSNTVEIRDNVL---TDNI-TLPIMNA  244 (317)
T ss_dssp             HHT------CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEECEEEETTEE---EEEE-CSSCCCH
T ss_pred             HhC------CEECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCeEEEEEEEeeCCee---eeeE-ecccCCC
Confidence            222      6799999999999999987   9999999999999999999999998766443110   0000 0112235


Q ss_pred             CCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          157 KPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       157 kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      ||+|.++..+++++|++|++|++||||.||.
T Consensus       245 kpkp~~~~~~~~~lgv~~~~~i~VGDs~~Di  275 (317)
T 4eze_A          245 ANKKQTLVDLAARLNIATENIIACGDGANDL  275 (317)
T ss_dssp             HHHHHHHHHHHHHHTCCGGGEEEEECSGGGH
T ss_pred             CCCHHHHHHHHHHcCCCcceEEEEeCCHHHH
Confidence            9999999999999999999999999999984

>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}

Probab=99.81  E-value=1.9e-19  Score=127.35  Aligned_cols=89  Identities=18%  Similarity=0.166  Sum_probs=77.6

Q ss_pred             CCCChhHHHHHHhhccCcE---EEecCCh---HHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHH
Q 029593           89 IKPDPQLRNLLCSITQRKI---IFTNSDR---NHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDA  162 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~---~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~  162 (191)
                      ..++||+.++|+.|+++|+   ++||++.   ..++..++.+|+..+|+.++++++...          .....||+|.+
T Consensus        33 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~----------~~~~~KP~p~~  102 (189)
T 3ib6_A           33 VVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYFDFIYASNSELQ----------PGKMEKPDKTI  102 (189)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGGGEEEEEECCTTSS----------TTCCCTTSHHH
T ss_pred             ceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchhheEEEEEcccccc----------ccCCCCcCHHH
Confidence            6899999999999999987   9999887   889999999999999999999887510          00125999999


Q ss_pred             HHHHHHHcCCCCCceEEecCc-cccc
Q 029593          163 MKLALHVANVDPRHAVRQSSF-LIFY  187 (191)
Q Consensus       163 ~~~~~~~~~~~p~~~i~iGDs-~~~~  187 (191)
                      ++.+++++|++|++|++|||+ .+|.
T Consensus       103 ~~~~~~~~~~~~~~~l~VGD~~~~Di  128 (189)
T 3ib6_A          103 FDFTLNALQIDKTEAVMVGNTFESDI  128 (189)
T ss_dssp             HHHHHHHHTCCGGGEEEEESBTTTTH
T ss_pred             HHHHHHHcCCCcccEEEECCCcHHHH
Confidence            999999999999999999999 5774

>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans}

Probab=99.80  E-value=1.3e-19  Score=131.95  Aligned_cols=154  Identities=16%  Similarity=0.092  Sum_probs=100.5

Q ss_pred             CceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHhccc--HHHHHHcC----CCCCccch
Q 029593            4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKAS-SLRVELFKAYGST--LAGLRALG----YDIGADDY   76 (191)
Q Consensus         4 ~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~----~~~~~~~~   76 (191)
                      ++|+|+||+||||+|+...+..++.++     ++..|.+..... ..........|..  ...+....    .+...+.+
T Consensus        10 ~~k~viFDlDGTL~ds~~~~~~~~~~~-----~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~   84 (231)
T 2p11_A           10 HDIVFLFDCDNTLLDNDHVLADLRAHM-----MREFGAQNSARYWEIFETLRTELGYADYLGALQRYRLEQPRDTRLLLM   84 (231)
T ss_dssp             CSEEEEECCBTTTBCHHHHHHHHHHHH-----HHHHCHHHHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHCTTCTGGGGG
T ss_pred             CCeEEEEcCCCCCEecHHHHHHHHHHH-----HHHcCCCcchHHHHHHHHHHHhcCchHHHHHHHHHHhccccchHHHHH
Confidence            578999999999999998888777763     444565432211 1111122222221  11111111    11112223


Q ss_pred             hhhhhcCCCCCCCCCChhHHHHHHhhccCcE--EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCC
Q 029593           77 HGFVHGRLPYDLIKPDPQLRNLLCSITQRKI--IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPV  154 (191)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~--i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~  154 (191)
                      ...+...  .....++||+.++|+.|+++|.  |+||++...++..++.+|+..+|+.++...                 
T Consensus        85 ~~~~~~~--~~~~~~~~g~~~~l~~l~~~g~~~i~Tn~~~~~~~~~l~~~gl~~~f~~~~~~~-----------------  145 (231)
T 2p11_A           85 SSFLIDY--PFASRVYPGALNALRHLGARGPTVILSDGDVVFQPRKIARSGLWDEVEGRVLIY-----------------  145 (231)
T ss_dssp             HHHHHHC--CGGGGBCTTHHHHHHHHHTTSCEEEEEECCSSHHHHHHHHTTHHHHTTTCEEEE-----------------
T ss_pred             HHHHHHH--HHhCCcCccHHHHHHHHHhCCCEEEEeCCCHHHHHHHHHHcCcHHhcCeeEEec-----------------
Confidence            3222221  2336789999999999998864  999999999999999999988888765421                 


Q ss_pred             CCCCCHHHHHHHHHHcCCCCCceEEecCccc
Q 029593          155 LLKPSMDAMKLALHVANVDPRHAVRQSSFLI  185 (191)
Q Consensus       155 ~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~  185 (191)
                        ++|+..++.+++  +++|++|++|||+.+
T Consensus       146 --~~K~~~~~~~~~--~~~~~~~~~vgDs~~  172 (231)
T 2p11_A          146 --IHKELMLDQVME--CYPARHYVMVDDKLR  172 (231)
T ss_dssp             --SSGGGCHHHHHH--HSCCSEEEEECSCHH
T ss_pred             --CChHHHHHHHHh--cCCCceEEEEcCccc
Confidence              334567777776  799999999999998

>2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20

Probab=99.79  E-value=9.2e-20  Score=133.17  Aligned_cols=90  Identities=12%  Similarity=0.067  Sum_probs=69.9

Q ss_pred             CCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHH-HH
Q 029593           89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDA-MK  164 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~-~~  164 (191)
                      ..++||+.++|+.|+++|+   |+||++...++..++  ++..+ +.+++++......      ......+||+|.. ++
T Consensus        76 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~--~l~~~-~~v~~~~~~~~~~------~~~~~~~kp~p~~~~~  146 (236)
T 2fea_A           76 AKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE--GIVEK-DRIYCNHASFDND------YIHIDWPHSCKGTCSN  146 (236)
T ss_dssp             CCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT--TTSCG-GGEEEEEEECSSS------BCEEECTTCCCTTCCS
T ss_pred             CCCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh--cCCCC-CeEEeeeeEEcCC------ceEEecCCCCcccccc
Confidence            6899999999999999886   999999988888888  77665 8888877644200      0000013888874 44


Q ss_pred             -------HHHHHcCCCCCceEEecCccccc
Q 029593          165 -------LALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       165 -------~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                             .++++++++|++|++|||+.+|.
T Consensus       147 ~~~~~K~~~~~~~~~~~~~~~~vGDs~~Di  176 (236)
T 2fea_A          147 QCGCCKPSVIHELSEPNQYIIMIGDSVTDV  176 (236)
T ss_dssp             CCSSCHHHHHHHHCCTTCEEEEEECCGGGH
T ss_pred             ccCCcHHHHHHHHhccCCeEEEEeCChHHH
Confidence                   88899999999999999999985

>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}

Probab=99.79  E-value=8.1e-19  Score=127.44  Aligned_cols=94  Identities=6%  Similarity=-0.095  Sum_probs=72.3

Q ss_pred             CCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q 029593           90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLA  166 (191)
Q Consensus        90 ~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~  166 (191)
                      .++||+.++++.|+++|+   |+||+....++.+++.+|+..++...+...+..   +++. +......+++++..++.+
T Consensus        92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~---~~g~-~~~~~~~~~~K~~~~~~~  167 (232)
T 3fvv_A           92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQHLIATDPEYRDGR---YTGR-IEGTPSFREGKVVRVNQW  167 (232)
T ss_dssp             GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCCEEEECEEEEETTE---EEEE-EESSCSSTHHHHHHHHHH
T ss_pred             hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCEEEEcceEEECCE---Eeee-ecCCCCcchHHHHHHHHH
Confidence            579999999999999987   999999999999999999987766544322110   0000 001222357788999999


Q ss_pred             HHHcC---CCCCceEEecCccccc
Q 029593          167 LHVAN---VDPRHAVRQSSFLIFY  187 (191)
Q Consensus       167 ~~~~~---~~p~~~i~iGDs~~~~  187 (191)
                      ++++|   ++|++|++||||.||.
T Consensus       168 ~~~~~~~~~~~~~~~~vGDs~~D~  191 (232)
T 3fvv_A          168 LAGMGLALGDFAESYFYSDSVNDV  191 (232)
T ss_dssp             HHHTTCCGGGSSEEEEEECCGGGH
T ss_pred             HHHcCCCcCchhheEEEeCCHhhH
Confidence            99999   9999999999999985

>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*

Probab=99.79  E-value=4.3e-20  Score=148.85  Aligned_cols=85  Identities=20%  Similarity=0.205  Sum_probs=71.0

Q ss_pred             CCCChhHHHHHHhhccCcE---EEecC--ChHHHHHHHhhc--CCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHH
Q 029593           89 IKPDPQLRNLLCSITQRKI---IFTNS--DRNHAITCLKRL--EIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMD  161 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~---i~t~~--~~~~~~~~l~~~--~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~  161 (191)
                      ..++|++.++|+.|+++|+   |+||+  ........+...  ++..+|+.++++++.+.              +||+|+
T Consensus        99 ~~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~l~~~fd~i~~~~~~~~--------------~KP~p~  164 (555)
T 3i28_A           99 RKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQVGM--------------VKPEPQ  164 (555)
T ss_dssp             CEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTSSEEEEHHHHTC--------------CTTCHH
T ss_pred             cCcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHhhhhhhheeEEEeccccCC--------------CCCCHH
Confidence            5889999999999999987   99998  222222233333  67889999999998887              499999


Q ss_pred             HHHHHHHHcCCCCCceEEecCccccc
Q 029593          162 AMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       162 ~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      +|..+++++|++|++|++|||+.+|.
T Consensus       165 ~~~~~~~~lg~~p~~~~~v~D~~~di  190 (555)
T 3i28_A          165 IYKFLLDTLKASPSEVVFLDDIGANL  190 (555)
T ss_dssp             HHHHHHHHHTCCGGGEEEEESCHHHH
T ss_pred             HHHHHHHHcCCChhHEEEECCcHHHH
Confidence            99999999999999999999999874

>1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A

Probab=99.79  E-value=1.1e-19  Score=129.79  Aligned_cols=88  Identities=7%  Similarity=-0.005  Sum_probs=72.2

Q ss_pred             CCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCccc-ceeeecccCCCCCCCCCCCCCCCCCCCCCHHHH
Q 029593           88 LIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCF-DQIICFETMNPNLSKATRPDEFPVLLKPSMDAM  163 (191)
Q Consensus        88 ~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f-~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~  163 (191)
                      ...++||+.++++.|+++ +   ++||++...++..++.+|+..+| +.++++++....           ...+|+|..+
T Consensus        67 ~~~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~~-----------~~~~p~p~~~  134 (206)
T 1rku_A           67 TLKPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVV-----------GYQLRQKDPK  134 (206)
T ss_dssp             TCCCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTTSCEE-----------EEECCSSSHH
T ss_pred             hcCCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHHcCCcceecceeEEcCCceEE-----------eeecCCCchH
Confidence            368899999999999987 5   99999999999999999999999 456655443210           0014778999


Q ss_pred             HHHHHHcCCCCCceEEecCccccc
Q 029593          164 KLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       164 ~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      ..+++++++.|++|++|||+.||.
T Consensus       135 ~~~l~~l~~~~~~~~~iGD~~~Di  158 (206)
T 1rku_A          135 RQSVIAFKSLYYRVIAAGDSYNDT  158 (206)
T ss_dssp             HHHHHHHHHTTCEEEEEECSSTTH
T ss_pred             HHHHHHHHhcCCEEEEEeCChhhH
Confidence            999999999999999999999985

>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A*

Probab=99.78  E-value=1.2e-18  Score=124.22  Aligned_cols=95  Identities=6%  Similarity=0.008  Sum_probs=69.2

Q ss_pred             CCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q 029593           89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKL  165 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~  165 (191)
                      ..+.|++.++++.|+++|+   ++|++....++..++.+++..+|+..+.......   .+... .....+++++..+..
T Consensus        75 ~~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~~~~K~~~l~~  150 (211)
T 1l7m_A           75 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDGKL---TGDVE-GEVLKENAKGEILEK  150 (211)
T ss_dssp             CCBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEE---EEEEE-CSSCSTTHHHHHHHH
T ss_pred             CCCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCeEEEeeeEEECCEE---cCCcc-cCccCCccHHHHHHH
Confidence            4567899999999999997   8888888888888888888776655432221000   00000 000124677899999


Q ss_pred             HHHHcCCCCCceEEecCccccc
Q 029593          166 ALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       166 ~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      +++++|++|++|++||||.||.
T Consensus       151 ~~~~lgi~~~~~~~iGD~~~Di  172 (211)
T 1l7m_A          151 IAKIEGINLEDTVAVGDGANDI  172 (211)
T ss_dssp             HHHHHTCCGGGEEEEECSGGGH
T ss_pred             HHHHcCCCHHHEEEEecChhHH
Confidence            9999999999999999999985

>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A

Probab=99.78  E-value=7.4e-20  Score=132.45  Aligned_cols=87  Identities=11%  Similarity=0.082  Sum_probs=69.9

Q ss_pred             CCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCc--ccceee--------ecccCCCCCCCCCCCCCCCCC
Q 029593           89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIAD--CFDQII--------CFETMNPNLSKATRPDEFPVL  155 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~--~f~~i~--------~~~~~~~~~~~~~~~~~~~~~  155 (191)
                      ..++||+.++|+.|+++|+   |+||++...++..++.+|+..  +|+.++        .+.+...          ....
T Consensus        85 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~~~~~~~~----------~~~~  154 (225)
T 1nnl_A           85 PHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDETQ----------PTAE  154 (225)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTTSCEEEECTTS----------GGGS
T ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCcccEEeeeEEEcCCCcEecCCCCC----------cccC
Confidence            6789999999999999986   999999999999999999973  777654        2332221          0111


Q ss_pred             CCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          156 LKPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       156 ~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      ++|||.+++.+++++|+  ++|++||||.+|.
T Consensus       155 ~~~Kp~~~~~~~~~~~~--~~~~~vGDs~~Di  184 (225)
T 1nnl_A          155 SGGKGKVIKLLKEKFHF--KKIIMIGDGATDM  184 (225)
T ss_dssp             TTHHHHHHHHHHHHHCC--SCEEEEESSHHHH
T ss_pred             CCchHHHHHHHHHHcCC--CcEEEEeCcHHhH
Confidence            36788999999999998  7999999999985

>2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV}

Probab=99.77  E-value=5.8e-19  Score=125.60  Aligned_cols=80  Identities=18%  Similarity=0.083  Sum_probs=67.4

Q ss_pred             CCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q 029593           89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKL  165 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~  165 (191)
                      ..++||+.++|+.|+++|+   |+||.....+...+   +  .+|+.++++++...              +||+|+++..
T Consensus        35 ~~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~---~--~~~d~v~~~~~~~~--------------~KP~p~~~~~   95 (196)
T 2oda_A           35 AQLTPGAQNALKALRDQGMPCAWIDELPEALSTPLA---A--PVNDWMIAAPRPTA--------------GWPQPDACWM   95 (196)
T ss_dssp             GSBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHH---T--TTTTTCEECCCCSS--------------CTTSTHHHHH
T ss_pred             CCcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhc---C--ccCCEEEECCcCCC--------------CCCChHHHHH
Confidence            5788999999999999887   89988877664333   2  46788999887765              5999999999


Q ss_pred             HHHHcCCCC-CceEEecCccccc
Q 029593          166 ALHVANVDP-RHAVRQSSFLIFY  187 (191)
Q Consensus       166 ~~~~~~~~p-~~~i~iGDs~~~~  187 (191)
                      +++++++.| ++|+||||+.+|-
T Consensus        96 a~~~l~~~~~~~~v~VGDs~~Di  118 (196)
T 2oda_A           96 ALMALNVSQLEGCVLISGDPRLL  118 (196)
T ss_dssp             HHHHTTCSCSTTCEEEESCHHHH
T ss_pred             HHHHcCCCCCccEEEEeCCHHHH
Confidence            999999975 8999999999873

>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}

Probab=99.77  E-value=9.3e-19  Score=137.87  Aligned_cols=163  Identities=13%  Similarity=0.011  Sum_probs=102.7

Q ss_pred             CceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccHHHHH---HcCCCCCccchhhhh
Q 029593            4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLR---ALGYDIGADDYHGFV   80 (191)
Q Consensus         4 ~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~   80 (191)
                      ++|+|+|||||||++++..     ..     +....|..... .................+.   ........+.+....
T Consensus       184 ~~k~viFD~DgTLi~~~~~-----~~-----la~~~g~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~  252 (415)
T 3p96_A          184 AKRLIVFDVDSTLVQGEVI-----EM-----LAAKAGAEGQV-AAITDAAMRGELDFAQSLQQRVATLAGLPATVIDEVA  252 (415)
T ss_dssp             CCCEEEECTBTTTBSSCHH-----HH-----HHHHTTCHHHH-HHHHHHHHTTCSCHHHHHHHHHHTTTTCBTHHHHHHH
T ss_pred             CCcEEEEcCcccCcCCchH-----HH-----HHHHcCCcHHH-HHHHHHHhcCCcCHHHHHHHHHHHhcCCCHHHHHHHH
Confidence            6899999999999999742     11     33445553221 1111111111000011111   111122333333333


Q ss_pred             hcCCCCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCC
Q 029593           81 HGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLK  157 (191)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~k  157 (191)
                      ..      +.++||+.+++..|+++|+   ++||++...++.+++.+|+..+|+..+...+...   ++. .......+|
T Consensus       253 ~~------~~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~dg~~---tg~-~~~~v~~~k  322 (415)
T 3p96_A          253 GQ------LELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAANELEIVDGTL---TGR-VVGPIIDRA  322 (415)
T ss_dssp             HH------CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSEEEEECEEEETTEE---EEE-ECSSCCCHH
T ss_pred             Hh------CccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccceeeeeEEEeCCEE---Eee-EccCCCCCc
Confidence            32      6899999999999999987   9999999999999999999887765432111000   000 000122359


Q ss_pred             CCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          158 PSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       158 p~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      |++.+++.+++++|++|++|++|||+.||.
T Consensus       323 pk~~~~~~~~~~~gi~~~~~i~vGD~~~Di  352 (415)
T 3p96_A          323 GKATALREFAQRAGVPMAQTVAVGDGANDI  352 (415)
T ss_dssp             HHHHHHHHHHHHHTCCGGGEEEEECSGGGH
T ss_pred             chHHHHHHHHHHcCcChhhEEEEECCHHHH
Confidence            999999999999999999999999999984

>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*

Probab=99.76  E-value=1.4e-18  Score=124.91  Aligned_cols=95  Identities=12%  Similarity=0.001  Sum_probs=71.4

Q ss_pred             CCCChhHHHHHHhhccCcE---EEecCC---------------hHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCC
Q 029593           89 IKPDPQLRNLLCSITQRKI---IFTNSD---------------RNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPD  150 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~---i~t~~~---------------~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~  150 (191)
                      ..++|++.++|+.|+++|+   ++||++               ...++..++.+|+.  |+.++.+...... ..+. ..
T Consensus        49 ~~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--f~~~~~~~~~~~~-~~~~-~~  124 (211)
T 2gmw_A           49 FEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVD--LDGIYYCPHHPQG-SVEE-FR  124 (211)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCC--CSEEEEECCBTTC-SSGG-GB
T ss_pred             CcCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCc--eEEEEECCcCCCC-cccc-cC
Confidence            6789999999999999987   999998               47788899999986  6665543211000 0000 00


Q ss_pred             CCCCCCCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          151 EFPVLLKPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       151 ~~~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      .....+||+|.+++.++++++++|++|++|||+.+|.
T Consensus       125 ~~~~~~KP~p~~~~~~~~~lgi~~~~~~~VGD~~~Di  161 (211)
T 2gmw_A          125 QVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDM  161 (211)
T ss_dssp             SCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHH
T ss_pred             ccCcCCCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHH
Confidence            1123469999999999999999999999999999884

>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}

Probab=99.75  E-value=4.1e-18  Score=119.26  Aligned_cols=85  Identities=14%  Similarity=0.003  Sum_probs=68.3

Q ss_pred             CCCChhHHHHHHhhccCcE---EEecCCh---------------HHHHHHHhhcC--CCcccceeee-cccCCCCCCCCC
Q 029593           89 IKPDPQLRNLLCSITQRKI---IFTNSDR---------------NHAITCLKRLE--IADCFDQIIC-FETMNPNLSKAT  147 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~---------------~~~~~~l~~~~--l~~~f~~i~~-~~~~~~~~~~~~  147 (191)
                      +.++|++.++|+.|+++|+   ++||++.               ..++..++.+|  +..+|..... ++....      
T Consensus        26 ~~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~------   99 (179)
T 3l8h_A           26 WIALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMGGVVDAIFMCPHGPDDGCAC------   99 (179)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTTCCCCEEEEECCCTTSCCSS------
T ss_pred             ceECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCCCceeEEEEcCCCCCCCCCC------
Confidence            6889999999999999987   9999886               56777888888  4333322222 344333      


Q ss_pred             CCCCCCCCCCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          148 RPDEFPVLLKPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       148 ~~~~~~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                              +||+|.+++.+++++|++|++|++|||+.+|.
T Consensus       100 --------~KP~~~~~~~~~~~~~~~~~~~~~vGD~~~Di  131 (179)
T 3l8h_A          100 --------RKPLPGMYRDIARRYDVDLAGVPAVGDSLRDL  131 (179)
T ss_dssp             --------STTSSHHHHHHHHHHTCCCTTCEEEESSHHHH
T ss_pred             --------CCCCHHHHHHHHHHcCCCHHHEEEECCCHHHH
Confidence                    59999999999999999999999999999874

>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}

Probab=99.73  E-value=1.4e-18  Score=116.18  Aligned_cols=82  Identities=18%  Similarity=0.269  Sum_probs=73.2

Q ss_pred             ChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q 029593           92 DPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALH  168 (191)
Q Consensus        92 ~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~  168 (191)
                      +|++.++++.|+++|+   ++||++...++..++.+++..+|+.+++++..+.              .||+|.+++.+++
T Consensus        20 ~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~--------------~Kp~~~~~~~~~~   85 (137)
T 2pr7_A           20 QRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETNGVVDKVLLSGELGV--------------EKPEEAAFQAAAD   85 (137)
T ss_dssp             HHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHHTTSSSEEEEHHHHSC--------------CTTSHHHHHHHHH
T ss_pred             CccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCChHhhccEEEEeccCCC--------------CCCCHHHHHHHHH
Confidence            4567788999999886   9999999888899999999999999999887665              4999999999999


Q ss_pred             HcCCCCCceEEecCccccc
Q 029593          169 VANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       169 ~~~~~p~~~i~iGDs~~~~  187 (191)
                      +++++|++|++|||+++|.
T Consensus        86 ~~~~~~~~~~~vgD~~~di  104 (137)
T 2pr7_A           86 AIDLPMRDCVLVDDSILNV  104 (137)
T ss_dssp             HTTCCGGGEEEEESCHHHH
T ss_pred             HcCCCcccEEEEcCCHHHH
Confidence            9999999999999999873

>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A

Probab=99.72  E-value=6.2e-18  Score=119.32  Aligned_cols=80  Identities=6%  Similarity=0.039  Sum_probs=71.5

Q ss_pred             CCCChhHHHHHHhhccCcE---EEecCC-hHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHH
Q 029593           89 IKPDPQLRNLLCSITQRKI---IFTNSD-RNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMK  164 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~---i~t~~~-~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~  164 (191)
                      ..+.|++.++|+.|+++|+   ++||++ ...++..++.+++..+|+.++...                   +|++..+.
T Consensus        67 ~~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~~~f~~~~~~~-------------------~~k~~~~~  127 (187)
T 2wm8_A           67 VRLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFRYFVHREIYP-------------------GSKITHFE  127 (187)
T ss_dssp             ECCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCTTTEEEEEESS-------------------SCHHHHHH
T ss_pred             cCcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcHhhcceeEEEe-------------------CchHHHHH
Confidence            5789999999999999886   999998 689999999999999999875432                   67789999


Q ss_pred             HHHHHcCCCCCceEEecCccccc
Q 029593          165 LALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       165 ~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      .++++++++|++|++|||+.+|.
T Consensus       128 ~~~~~~~~~~~~~~~igD~~~Di  150 (187)
T 2wm8_A          128 RLQQKTGIPFSQMIFFDDERRNI  150 (187)
T ss_dssp             HHHHHHCCCGGGEEEEESCHHHH
T ss_pred             HHHHHcCCChHHEEEEeCCccCh
Confidence            99999999999999999999874

>1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14

Probab=99.71  E-value=6.9e-19  Score=130.43  Aligned_cols=85  Identities=13%  Similarity=-0.014  Sum_probs=66.4

Q ss_pred             CCCCChhHHHHHHhhccCcE--EEecCChHH--HHH-HHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHH
Q 029593           88 LIKPDPQLRNLLCSITQRKI--IFTNSDRNH--AIT-CLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDA  162 (191)
Q Consensus        88 ~~~~~~~~~~~l~~l~~~g~--i~t~~~~~~--~~~-~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~  162 (191)
                      ...++|++.++++.|+ +|+  ++||++...  ... ..+..++..+|+.+++++..+.              +||+|.+
T Consensus       124 ~~~~~~~~~~~l~~l~-~g~~~i~tn~~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~--------------~KP~p~~  188 (264)
T 1yv9_A          124 TELSYEKVVLATLAIQ-KGALFIGTNPDKNIPTERGLLPGAGSVVTFVETATQTKPVYI--------------GKPKAII  188 (264)
T ss_dssp             TTCCHHHHHHHHHHHH-TTCEEEESCCCSEEEETTEEEECHHHHHHHHHHHHTCCCEEC--------------STTSHHH
T ss_pred             CCcCHHHHHHHHHHHh-CCCEEEEECCCCcccCCCCcccCCcHHHHHHHHHhCCCcccc--------------CCCCHHH
Confidence            3568899999999997 676  888877632  111 2233446677888888776555              5999999


Q ss_pred             HHHHHHHcCCCCCceEEecCcc-ccc
Q 029593          163 MKLALHVANVDPRHAVRQSSFL-IFY  187 (191)
Q Consensus       163 ~~~~~~~~~~~p~~~i~iGDs~-~~~  187 (191)
                      ++.+++++|++|++|++|||++ +|.
T Consensus       189 ~~~~~~~~~~~~~~~~~vGD~~~~Di  214 (264)
T 1yv9_A          189 MERAIAHLGVEKEQVIMVGDNYETDI  214 (264)
T ss_dssp             HHHHHHHHCSCGGGEEEEESCTTTHH
T ss_pred             HHHHHHHcCCCHHHEEEECCCcHHHH
Confidence            9999999999999999999995 874

>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp}

Probab=99.70  E-value=1.2e-17  Score=119.57  Aligned_cols=89  Identities=10%  Similarity=0.012  Sum_probs=63.9

Q ss_pred             CCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCC--cccce--eeecccCCCCCCCCCCCCCCCCCCCCCHH
Q 029593           89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIA--DCFDQ--IICFETMNPNLSKATRPDEFPVLLKPSMD  161 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~--~~f~~--i~~~~~~~~~~~~~~~~~~~~~~~kp~~~  161 (191)
                      ..+.|++.++++.|+++|+   ++||+....++..++.+++.  .+|..  +++.+....          ....+||++.
T Consensus        81 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~  150 (219)
T 3kd3_A           81 NLLTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPRENIFAVETIWNSDGSFK----------ELDNSNGACD  150 (219)
T ss_dssp             TTBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGGEEEEEEEECTTSBEE----------EEECTTSTTT
T ss_pred             ccCChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCcccEEEeeeeecCCCcee----------ccCCCCCCcc
Confidence            4578999999999999987   99999999999999999984  35543  222221100          0011366554


Q ss_pred             -HHHHHHHHcCCCCCceEEecCccccc
Q 029593          162 -AMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       162 -~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                       .++.+++.+|++|++|++||||.||.
T Consensus       151 ~~~~~l~~~~~~~~~~~~~vGD~~~Di  177 (219)
T 3kd3_A          151 SKLSAFDKAKGLIDGEVIAIGDGYTDY  177 (219)
T ss_dssp             CHHHHHHHHGGGCCSEEEEEESSHHHH
T ss_pred             cHHHHHHHHhCCCCCCEEEEECCHhHH
Confidence             44555566799999999999999984

>2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A

Probab=99.69  E-value=1.6e-19  Score=133.21  Aligned_cols=83  Identities=16%  Similarity=-0.080  Sum_probs=68.0

Q ss_pred             CCChhHHHHHHhhccCcE--EEecCChHHHHHHHhhcCCCcccc---eeeecccCCCCCCCCCCCCCCCCCCCCCHHHHH
Q 029593           90 KPDPQLRNLLCSITQRKI--IFTNSDRNHAITCLKRLEIADCFD---QIICFETMNPNLSKATRPDEFPVLLKPSMDAMK  164 (191)
Q Consensus        90 ~~~~~~~~~l~~l~~~g~--i~t~~~~~~~~~~l~~~~l~~~f~---~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~  164 (191)
                      .+++++.++++.|+ +|+  ++||.+.......+...++..+|+   .+++++....              +||+|.+++
T Consensus       122 ~~~~~~~~~l~~l~-~~~~~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~Kp~~~~~~  186 (259)
T 2ho4_A          122 FHYQLLNQAFRLLL-DGAPLIAIHKARYYKRKDGLALGPGPFVTALEYATDTKAMVV--------------GKPEKTFFL  186 (259)
T ss_dssp             CBHHHHHHHHHHHH-TTCCEEESCCCSEEEETTEEEECSHHHHHHHHHHHTCCCEEC--------------STTSHHHHH
T ss_pred             CCHHHHHHHHHHHH-CCCEEEEECCCCcCcccCCcccCCcHHHHHHHHHhCCCceEe--------------cCCCHHHHH
Confidence            36789999999999 776  888887665555567778877776   5566665554              599999999


Q ss_pred             HHHHHcCCCCCceEEecCcc-ccc
Q 029593          165 LALHVANVDPRHAVRQSSFL-IFY  187 (191)
Q Consensus       165 ~~~~~~~~~p~~~i~iGDs~-~~~  187 (191)
                      .+++++|++|++|++|||++ ||.
T Consensus       187 ~~~~~lgi~~~~~~~iGD~~~~Di  210 (259)
T 2ho4_A          187 EALRDADCAPEEAVMIGDDCRDDV  210 (259)
T ss_dssp             HHGGGGTCCGGGEEEEESCTTTTH
T ss_pred             HHHHHcCCChHHEEEECCCcHHHH
Confidence            99999999999999999998 985

>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}

Probab=99.68  E-value=6.7e-17  Score=123.89  Aligned_cols=95  Identities=9%  Similarity=-0.038  Sum_probs=74.1

Q ss_pred             CCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q 029593           89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKL  165 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~  165 (191)
                      .++.|++.++++.|+++|+   ++||+....++.+++.+|+..+|+..+...+...   ++.+ ......+||+|.+++.
T Consensus       177 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~d~~~---tg~~-~~~~~~~kpk~~~~~~  252 (335)
T 3n28_A          177 LPLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSNTLEIVSGKL---TGQV-LGEVVSAQTKADILLT  252 (335)
T ss_dssp             CCCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEE---EEEE-ESCCCCHHHHHHHHHH
T ss_pred             CCcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCeEEeeeeEeeCCee---eeee-cccccChhhhHHHHHH
Confidence            6789999999999999987   9999999999999999999888776542211100   0000 0011235999999999


Q ss_pred             HHHHcCCCCCceEEecCccccc
Q 029593          166 ALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       166 ~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      +++++|++|++|++||||.||-
T Consensus       253 ~~~~lgi~~~~~v~vGDs~nDi  274 (335)
T 3n28_A          253 LAQQYDVEIHNTVAVGDGANDL  274 (335)
T ss_dssp             HHHHHTCCGGGEEEEECSGGGH
T ss_pred             HHHHcCCChhhEEEEeCCHHHH
Confidence            9999999999999999999984

>4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A

Probab=99.67  E-value=2e-17  Score=117.05  Aligned_cols=83  Identities=10%  Similarity=0.013  Sum_probs=62.9

Q ss_pred             CCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q 029593           89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKL  165 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~  165 (191)
                      ..+.|++.++++.|+++|+   ++||++...++.. +.+++..+++.+...+.....             ++|.+.....
T Consensus        78 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~k~~  143 (201)
T 4ap9_A           78 VNVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEFMANRAIFEDGKFQG-------------IRLRFRDKGE  143 (201)
T ss_dssp             CCCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEEEEEEEEEETTEEEE-------------EECCSSCHHH
T ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchhheeeEEeeCCceEC-------------CcCCccCHHH
Confidence            6899999999999999987   9999888888888 889988775555544322110             2454444556


Q ss_pred             HHHHcCCCCCceEEecCccccc
Q 029593          166 ALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       166 ~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      +++.+  +|++|++|||+.||.
T Consensus       144 ~l~~l--~~~~~i~iGD~~~Di  163 (201)
T 4ap9_A          144 FLKRF--RDGFILAMGDGYADA  163 (201)
T ss_dssp             HHGGG--TTSCEEEEECTTCCH
T ss_pred             HHHhc--CcCcEEEEeCCHHHH
Confidence            66666  999999999999984

>2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A*

Probab=99.67  E-value=8.8e-19  Score=124.26  Aligned_cols=137  Identities=15%  Similarity=0.067  Sum_probs=89.7

Q ss_pred             ceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccHHHHHHcCCCCCccchhhhhhcCC
Q 029593            5 FNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLRALGYDIGADDYHGFVHGRL   84 (191)
Q Consensus         5 ~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (191)
                      .++|+|||||||+|+.+.+..++.+.+     +  |.+......... +.     ....+..+. +...+.+...+....
T Consensus         2 ~k~viFDlDGTL~Ds~~~~~~~~~~~~-----~--g~~~~~~~~~~~-~~-----~~~~~~~~~-~~~~~~~~~~~~~~~   67 (193)
T 2i7d_A            2 SVRVLVDMDGVLADFEAGLLRGFRRRF-----P--EEPHVPLEQRRG-FL-----AREQYRALR-PDLADKVASVYEAPG   67 (193)
T ss_dssp             CEEEEECSBTTTBCHHHHHHHHHHHHS-----T--TSCCCCGGGCCS-SC-----HHHHHHHHC-TTHHHHHHHHHTSTT
T ss_pred             CcEEEEECCCcCccchhHHHHHHHHHh-----c--CCCCCCHHHHHH-hh-----HHHHHHHHh-HHHHHHHHHHHHhcC
Confidence            589999999999999988887877632     2  432100000000 00     000011110 001122333333321


Q ss_pred             CCCCCCCChhHHHHHHhhccC-cE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCH
Q 029593           85 PYDLIKPDPQLRNLLCSITQR-KI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSM  160 (191)
Q Consensus        85 ~~~~~~~~~~~~~~l~~l~~~-g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~  160 (191)
                      ......++||+.++|+.|+++ |+   ++||++...++..++.+|+   |+.++++                        
T Consensus        68 ~~~~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~gl---f~~i~~~------------------------  120 (193)
T 2i7d_A           68 FFLDLEPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEKYRW---VEQHLGP------------------------  120 (193)
T ss_dssp             TTTTCCBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHHHHHH---HHHHHCH------------------------
T ss_pred             ccccCccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHHHhCc---hhhhcCH------------------------
Confidence            123468899999999999998 87   9999998888889999888   7776652                        


Q ss_pred             HHHHHHHHHcCCCCCceEEecCcccc
Q 029593          161 DAMKLALHVANVDPRHAVRQSSFLIF  186 (191)
Q Consensus       161 ~~~~~~~~~~~~~p~~~i~iGDs~~~  186 (191)
                          .++++++++|++|++|||+++|
T Consensus       121 ----~~~~~~~~~~~~~~~vgDs~~d  142 (193)
T 2i7d_A          121 ----QFVERIILTRDKTVVLGDLLID  142 (193)
T ss_dssp             ----HHHTTEEECSCGGGBCCSEEEE
T ss_pred             ----HHHHHcCCCcccEEEECCchhh
Confidence                1678899999999999999988

>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*

Probab=99.65  E-value=4.8e-16  Score=107.24  Aligned_cols=67  Identities=10%  Similarity=0.037  Sum_probs=60.1

Q ss_pred             HHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHcCCCC
Q 029593           98 LLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDP  174 (191)
Q Consensus        98 ~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~p  174 (191)
                      +++.|+++|+   ++||++...++..++.+|+..+|+.                       .||+|.+++.++++++++|
T Consensus        39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~~~~-----------------------~kpk~~~~~~~~~~~~~~~   95 (164)
T 3e8m_A           39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDYLFQG-----------------------VVDKLSAAEELCNELGINL   95 (164)
T ss_dssp             HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSEEECS-----------------------CSCHHHHHHHHHHHHTCCG
T ss_pred             HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCEeecc-----------------------cCChHHHHHHHHHHcCCCH
Confidence            7899999887   9999999999999999998765543                       1999999999999999999


Q ss_pred             CceEEecCccccc
Q 029593          175 RHAVRQSSFLIFY  187 (191)
Q Consensus       175 ~~~i~iGDs~~~~  187 (191)
                      ++|++|||+.||.
T Consensus        96 ~~~~~vGD~~~Di  108 (164)
T 3e8m_A           96 EQVAYIGDDLNDA  108 (164)
T ss_dssp             GGEEEECCSGGGH
T ss_pred             HHEEEECCCHHHH
Confidence            9999999999984

>2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14

Probab=99.65  E-value=1.6e-18  Score=126.56  Aligned_cols=32  Identities=19%  Similarity=0.020  Sum_probs=30.2

Q ss_pred             CCCCHHHHHHHHHHcCCCCCceEEecCc-cccc
Q 029593          156 LKPSMDAMKLALHVANVDPRHAVRQSSF-LIFY  187 (191)
Q Consensus       156 ~kp~~~~~~~~~~~~~~~p~~~i~iGDs-~~~~  187 (191)
                      +||++.+++.+++++|++|++|++|||+ .||.
T Consensus       175 ~kpk~~~~~~~~~~lgi~~~~~i~iGD~~~nDi  207 (250)
T 2c4n_A          175 GKPSPWIIRAALNKMQAHSEETVIVGDNLRTDI  207 (250)
T ss_dssp             STTSTHHHHHHHHHHTCCGGGEEEEESCTTTHH
T ss_pred             CCCCHHHHHHHHHHcCCCcceEEEECCCchhHH
Confidence            5999999999999999999999999999 5984

>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*

Probab=99.64  E-value=5.6e-17  Score=113.41  Aligned_cols=83  Identities=13%  Similarity=0.179  Sum_probs=68.0

Q ss_pred             CCCChhHHHHHHhhccCcE---EEecC---------------ChHHHHHHHhhcCCCcccceeeec-----ccCCCCCCC
Q 029593           89 IKPDPQLRNLLCSITQRKI---IFTNS---------------DRNHAITCLKRLEIADCFDQIICF-----ETMNPNLSK  145 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~---i~t~~---------------~~~~~~~~l~~~~l~~~f~~i~~~-----~~~~~~~~~  145 (191)
                      ..++|++.++|+.|+++|+   |+||+               ....++..++.+++.  |+.++.+     ++.+.    
T Consensus        41 ~~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--fd~v~~s~~~~~~~~~~----  114 (176)
T 2fpr_A           41 LAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQ--FDEVLICPHLPADECDC----  114 (176)
T ss_dssp             CCBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCC--EEEEEEECCCGGGCCSS----
T ss_pred             CcCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCC--eeEEEEcCCCCcccccc----
Confidence            6789999999999999987   99998               567788899999986  8887643     44444    


Q ss_pred             CCCCCCCCCCCCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          146 ATRPDEFPVLLKPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       146 ~~~~~~~~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                                .||+|.+|+.++++++++|++|++|||+.+|.
T Consensus       115 ----------~KP~p~~~~~~~~~~gi~~~~~l~VGD~~~Di  146 (176)
T 2fpr_A          115 ----------RKPKVKLVERYLAEQAMDRANSYVIGDRATDI  146 (176)
T ss_dssp             ----------STTSCGGGGGGC----CCGGGCEEEESSHHHH
T ss_pred             ----------cCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHH
Confidence                      59999999999999999999999999999874

>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}

Probab=99.64  E-value=7.4e-17  Score=111.10  Aligned_cols=73  Identities=10%  Similarity=0.022  Sum_probs=63.3

Q ss_pred             ChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q 029593           92 DPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALH  168 (191)
Q Consensus        92 ~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~  168 (191)
                      .|+..++++.|+++|+   ++||++...++..++.+|+..+|+.                       +||++.+++.+++
T Consensus        38 ~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~~-----------------------~kp~~~~~~~~~~   94 (162)
T 2p9j_A           38 NVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVEEIYTG-----------------------SYKKLEIYEKIKE   94 (162)
T ss_dssp             EHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCCEEEEC-----------------------C--CHHHHHHHHH
T ss_pred             cccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCHhhccC-----------------------CCCCHHHHHHHHH
Confidence            4667899999999987   9999999999999999998766642                       2999999999999


Q ss_pred             HcCCCCCceEEecCccccc
Q 029593          169 VANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       169 ~~~~~p~~~i~iGDs~~~~  187 (191)
                      .++++|++|++|||+.+|.
T Consensus        95 ~~~~~~~~~~~vGD~~~Di  113 (162)
T 2p9j_A           95 KYSLKDEEIGFIGDDVVDI  113 (162)
T ss_dssp             HTTCCGGGEEEEECSGGGH
T ss_pred             HcCCCHHHEEEECCCHHHH
Confidence            9999999999999999984

>1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A

Probab=99.64  E-value=8.3e-18  Score=119.61  Aligned_cols=136  Identities=11%  Similarity=0.052  Sum_probs=88.3

Q ss_pred             CceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhC-CCHHHHHHHHHHHHHHhcccHHHHHHcCCCCCccchhhhhhc
Q 029593            4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCG-FSETKASSLRVELFKAYGSTLAGLRALGYDIGADDYHGFVHG   82 (191)
Q Consensus         4 ~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (191)
                      +.++|+|||||||+|+...+..++.+++.+     ++ .+......        +. ....+..+. +...+++...+..
T Consensus         3 ~~k~viFDlDGTL~Ds~~~~~~~~~~~~~~-----~~~~~~~~~~~--------~~-~~~~~~~~~-~~~~~~~~~~~~~   67 (197)
T 1q92_A            3 RALRVLVDMDGVLADFEGGFLRKFRARFPD-----QPFIALEDRRG--------FW-VSEQYGRLR-PGLSEKAISIWES   67 (197)
T ss_dssp             CCEEEEECSBTTTBCHHHHHHHHHHHHCTT-----SCCCCGGGCCS--------SC-HHHHHHHHS-TTHHHHHHHHHTS
T ss_pred             CceEEEEeCCCCCccCcHHHHHHHHHHHhc-----CCCCCHHHhcC--------Cc-HHHHHHhcC-HHHHHHHHHHHHh
Confidence            579999999999999998888888774432     21 11110000        00 000000000 0001112222222


Q ss_pred             CCCCCCCCCChhHHHHHHhhccC-cE---EEecCChHHHHHHHhhcCCCc-ccceeeecccCCCCCCCCCCCCCCCCCCC
Q 029593           83 RLPYDLIKPDPQLRNLLCSITQR-KI---IFTNSDRNHAITCLKRLEIAD-CFDQIICFETMNPNLSKATRPDEFPVLLK  157 (191)
Q Consensus        83 ~~~~~~~~~~~~~~~~l~~l~~~-g~---i~t~~~~~~~~~~l~~~~l~~-~f~~i~~~~~~~~~~~~~~~~~~~~~~~k  157 (191)
                      ........++||+.++|+.|+++ |+   |+||++...++..++++++.. +|+                          
T Consensus        68 ~~~~~~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~f~--------------------------  121 (197)
T 1q92_A           68 KNFFFELEPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAWVEKYFG--------------------------  121 (197)
T ss_dssp             TTTTTTCCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHHHHHHHHC--------------------------
T ss_pred             hhhhhcCCcCcCHHHHHHHHHhcCCCeEEEEeCCccchHHHHHHHhchHHHhch--------------------------
Confidence            11123468899999999999998 87   999999888888888888876 665                          


Q ss_pred             CCHHHHHHHHHHcCCCCCceEEecCcccc
Q 029593          158 PSMDAMKLALHVANVDPRHAVRQSSFLIF  186 (191)
Q Consensus       158 p~~~~~~~~~~~~~~~p~~~i~iGDs~~~  186 (191)
                            ..++++++++|++|++|||+.+|
T Consensus       122 ------~~~~~~l~~~~~~~~~vgDs~~d  144 (197)
T 1q92_A          122 ------PDFLEQIVLTRDKTVVSADLLID  144 (197)
T ss_dssp             ------GGGGGGEEECSCSTTSCCSEEEE
T ss_pred             ------HHHHHHhccCCccEEEECccccc
Confidence                  23567789999999999999987

>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}

Probab=99.63  E-value=9.7e-18  Score=117.29  Aligned_cols=66  Identities=9%  Similarity=0.104  Sum_probs=59.0

Q ss_pred             HHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHcCCCC
Q 029593           98 LLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDP  174 (191)
Q Consensus        98 ~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~p  174 (191)
                      +++.|+++|+   ++||++...++..++.+|+.     ++.+                   .||++.+++.+++.++++|
T Consensus        47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~-----~~~~-------------------~~~k~~~l~~~~~~~~~~~  102 (176)
T 3mmz_A           47 GIAALRKSGLTMLILSTEQNPVVAARARKLKIP-----VLHG-------------------IDRKDLALKQWCEEQGIAP  102 (176)
T ss_dssp             HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC-----EEES-------------------CSCHHHHHHHHHHHHTCCG
T ss_pred             HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe-----eEeC-------------------CCChHHHHHHHHHHcCCCH
Confidence            8899999987   99999999999999999986     3332                   2889999999999999999


Q ss_pred             CceEEecCccccc
Q 029593          175 RHAVRQSSFLIFY  187 (191)
Q Consensus       175 ~~~i~iGDs~~~~  187 (191)
                      ++|++|||+.||.
T Consensus       103 ~~~~~vGD~~nD~  115 (176)
T 3mmz_A          103 ERVLYVGNDVNDL  115 (176)
T ss_dssp             GGEEEEECSGGGH
T ss_pred             HHEEEEcCCHHHH
Confidence            9999999999984

>4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A

Probab=99.62  E-value=2.5e-16  Score=117.47  Aligned_cols=32  Identities=3%  Similarity=-0.151  Sum_probs=30.1

Q ss_pred             CCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          156 LKPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       156 ~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      +.+|+.+++.+++.+|++|++|++|||+.||-
T Consensus       195 ~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi  226 (279)
T 4dw8_A          195 GIDKALSLSVLLENIGMTREEVIAIGDGYNDL  226 (279)
T ss_dssp             TCCHHHHHHHHHHHHTCCGGGEEEEECSGGGH
T ss_pred             CCChHHHHHHHHHHcCCCHHHEEEECCChhhH
Confidence            47889999999999999999999999999984

>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A*

Probab=99.62  E-value=7.3e-16  Score=121.28  Aligned_cols=78  Identities=18%  Similarity=0.210  Sum_probs=68.4

Q ss_pred             CChhHHHHHHhhccCcE---EEecCC------------hHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCC
Q 029593           91 PDPQLRNLLCSITQRKI---IFTNSD------------RNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVL  155 (191)
Q Consensus        91 ~~~~~~~~l~~l~~~g~---i~t~~~------------~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~  155 (191)
                      ++||+.++|..|+++|+   |+||.+            ...+...++.+|+.  |+.++++++...              
T Consensus        88 ~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~lgl~--fd~i~~~~~~~~--------------  151 (416)
T 3zvl_A           88 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVP--FQVLVATHAGLN--------------  151 (416)
T ss_dssp             SCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHHHTSC--CEEEEECSSSTT--------------
T ss_pred             hcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHHcCCC--EEEEEECCCCCC--------------
Confidence            78999999999999987   999965            22377788898984  899999887766              


Q ss_pred             CCCCHHHHHHHHHHcC----CCCCceEEecCcc
Q 029593          156 LKPSMDAMKLALHVAN----VDPRHAVRQSSFL  184 (191)
Q Consensus       156 ~kp~~~~~~~~~~~~~----~~p~~~i~iGDs~  184 (191)
                      .||+|.++..+++.+|    ++|++|+||||+.
T Consensus       152 ~KP~p~~~~~a~~~l~~~~~v~~~~~l~VGDs~  184 (416)
T 3zvl_A          152 RKPVSGMWDHLQEQANEGIPISVEDSVFVGDAA  184 (416)
T ss_dssp             STTSSHHHHHHHHHSSTTCCCCGGGCEEECSCS
T ss_pred             CCCCHHHHHHHHHHhCCCCCCCHHHeEEEECCC
Confidence            5999999999999998    9999999999997

>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}

Probab=99.61  E-value=2.8e-17  Score=118.07  Aligned_cols=67  Identities=15%  Similarity=0.117  Sum_probs=60.1

Q ss_pred             HHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHcCCCC
Q 029593           98 LLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDP  174 (191)
Q Consensus        98 ~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~p  174 (191)
                      +++.|+++|+   |+|+.+...++..++.+|+..+|+.+                       ||++.+++.+++++|++|
T Consensus        84 ~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~~~f~~~-----------------------k~K~~~l~~~~~~lg~~~  140 (211)
T 3ij5_A           84 GIRCLITSDIDVAIITGRRAKLLEDRANTLGITHLYQGQ-----------------------SDKLVAYHELLATLQCQP  140 (211)
T ss_dssp             HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCCEEECSC-----------------------SSHHHHHHHHHHHHTCCG
T ss_pred             HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCchhhccc-----------------------CChHHHHHHHHHHcCcCc
Confidence            8899999997   99999999999999999997666521                       777899999999999999


Q ss_pred             CceEEecCccccc
Q 029593          175 RHAVRQSSFLIFY  187 (191)
Q Consensus       175 ~~~i~iGDs~~~~  187 (191)
                      ++|++|||+.||-
T Consensus       141 ~~~~~vGDs~nDi  153 (211)
T 3ij5_A          141 EQVAYIGDDLIDW  153 (211)
T ss_dssp             GGEEEEECSGGGH
T ss_pred             ceEEEEcCCHHHH
Confidence            9999999999984

>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A

Probab=99.60  E-value=3.3e-17  Score=115.84  Aligned_cols=67  Identities=10%  Similarity=0.011  Sum_probs=59.7

Q ss_pred             HHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHcCCCC
Q 029593           98 LLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDP  174 (191)
Q Consensus        98 ~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~p  174 (191)
                      +++.|+++|+   ++||++...++..++.+|+..+|+.+                       +|||.+++.+++++|++|
T Consensus        54 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~~~f~~~-----------------------~~K~~~~~~~~~~~g~~~  110 (189)
T 3mn1_A           54 GIKMLIASGVTTAIISGRKTAIVERRAKSLGIEHLFQGR-----------------------EDKLVVLDKLLAELQLGY  110 (189)
T ss_dssp             HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCSEEECSC-----------------------SCHHHHHHHHHHHHTCCG
T ss_pred             HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCHHHhcCc-----------------------CChHHHHHHHHHHcCCCh
Confidence            8899999987   99999999999999999997777643                       444699999999999999


Q ss_pred             CceEEecCccccc
Q 029593          175 RHAVRQSSFLIFY  187 (191)
Q Consensus       175 ~~~i~iGDs~~~~  187 (191)
                      ++|++|||+.||-
T Consensus       111 ~~~~~vGD~~nDi  123 (189)
T 3mn1_A          111 EQVAYLGDDLPDL  123 (189)
T ss_dssp             GGEEEEECSGGGH
T ss_pred             hHEEEECCCHHHH
Confidence            9999999999984

>2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19

Probab=99.59  E-value=1.5e-15  Score=109.52  Aligned_cols=95  Identities=14%  Similarity=0.119  Sum_probs=69.7

Q ss_pred             CCCChhHHHHHHhhccCcE---EEecCCh---------------HHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCC
Q 029593           89 IKPDPQLRNLLCSITQRKI---IFTNSDR---------------NHAITCLKRLEIADCFDQIICFETMNPNLSKATRPD  150 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~---------------~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~  150 (191)
                      ..++|++.++|+.|+++|+   ++||++.               ..++..++.+|+.  |+.++.+.....+.+. . -.
T Consensus        55 ~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--~~~~~~~~~~~~g~~~-~-~~  130 (218)
T 2o2x_A           55 IVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVF--VDMVLACAYHEAGVGP-L-AI  130 (218)
T ss_dssp             CCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCC--CSEEEEECCCTTCCST-T-CC
T ss_pred             CeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcCCc--eeeEEEeecCCCCcee-e-cc
Confidence            5789999999999999886   9999887               6788889998874  5554322110000000 0 00


Q ss_pred             CCCCCCCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          151 EFPVLLKPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       151 ~~~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      .....+||+|.+++.++++++++|++|++|||+++|.
T Consensus       131 ~~~~~~KP~~~~~~~~~~~~~i~~~~~~~VGD~~~Di  167 (218)
T 2o2x_A          131 PDHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADM  167 (218)
T ss_dssp             SSCTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHH
T ss_pred             cCCccCCCCHHHHHHHHHHcCCCHHHEEEEeCCHHHH
Confidence            1123469999999999999999999999999999874

>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*

Probab=99.59  E-value=3.1e-16  Score=109.95  Aligned_cols=73  Identities=11%  Similarity=-0.053  Sum_probs=63.5

Q ss_pred             ChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q 029593           92 DPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALH  168 (191)
Q Consensus        92 ~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~  168 (191)
                      .+...++++.|+++|+   ++||.+...++..++.+++..+|+.                       .||++.+++.+++
T Consensus        37 ~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~~~~~~-----------------------~k~k~~~~~~~~~   93 (180)
T 1k1e_A           37 HVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKLFFLG-----------------------KLEKETACFDLMK   93 (180)
T ss_dssp             EHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCEEEES-----------------------CSCHHHHHHHHHH
T ss_pred             ccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCceeecC-----------------------CCCcHHHHHHHHH
Confidence            3455689999999987   9999999999999999999765521                       2899999999999


Q ss_pred             HcCCCCCceEEecCccccc
Q 029593          169 VANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       169 ~~~~~p~~~i~iGDs~~~~  187 (191)
                      +++++|++|++|||+.||.
T Consensus        94 ~~~~~~~~~~~vGD~~~Di  112 (180)
T 1k1e_A           94 QAGVTAEQTAYIGDDSVDL  112 (180)
T ss_dssp             HHTCCGGGEEEEECSGGGH
T ss_pred             HcCCCHHHEEEECCCHHHH
Confidence            9999999999999999985

>3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp}

Probab=99.58  E-value=9.4e-16  Score=115.05  Aligned_cols=84  Identities=7%  Similarity=-0.022  Sum_probs=65.6

Q ss_pred             CCChhHHHHHHhhccC-cE---EEecC---------------------ChHHHHHHHhhcCCCccccee----------e
Q 029593           90 KPDPQLRNLLCSITQR-KI---IFTNS---------------------DRNHAITCLKRLEIADCFDQI----------I  134 (191)
Q Consensus        90 ~~~~~~~~~l~~l~~~-g~---i~t~~---------------------~~~~~~~~l~~~~l~~~f~~i----------~  134 (191)
                      .+.+++.++++.++++ |+   +.|+.                     ....+...++..|+..+|..+          .
T Consensus       122 ~~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~  201 (289)
T 3gyg_A          122 FSKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEEYGVSVNINRCNPLAGDPEDSY  201 (289)
T ss_dssp             CCHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHHHHHHHHHHTEEEEEEECCGGGTCCTTEE
T ss_pred             CCHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHHHHHHHHHHHcCCCEEEEEccccccCCCCce
Confidence            5678999999999876 76   55654                     345566777888887666554          4


Q ss_pred             ecccCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          135 CFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      +.+....              ++|++.+++.+++++|++|++|++|||+.||-
T Consensus       202 ~~~~~~~--------------~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~  240 (289)
T 3gyg_A          202 DVDFIPI--------------GTGKNEIVTFMLEKYNLNTERAIAFGDSGNDV  240 (289)
T ss_dssp             EEEEEES--------------CCSHHHHHHHHHHHHTCCGGGEEEEECSGGGH
T ss_pred             EEEEEeC--------------CCCHHHHHHHHHHHcCCChhhEEEEcCCHHHH
Confidence            4444443              58999999999999999999999999999984

>1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A*

Probab=99.58  E-value=1.1e-16  Score=118.89  Aligned_cols=84  Identities=12%  Similarity=-0.005  Sum_probs=63.8

Q ss_pred             CCCChhHHHHHHhhccCcE--EEecCChHHHHH---HHhhcCCCcccceeeeccc-CCCCCCCCCCCCCCCCCCCCCHHH
Q 029593           89 IKPDPQLRNLLCSITQRKI--IFTNSDRNHAIT---CLKRLEIADCFDQIICFET-MNPNLSKATRPDEFPVLLKPSMDA  162 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~--i~t~~~~~~~~~---~l~~~~l~~~f~~i~~~~~-~~~~~~~~~~~~~~~~~~kp~~~~  162 (191)
                      ..+++++.++++.| +.|+  ++||.+......   .++..++..+|+.+++++. ...              +||++.+
T Consensus       136 ~~~~~~~~~~l~~l-~~~~~~i~tn~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--------------~kpk~~~  200 (271)
T 1vjr_A          136 TLTYERLKKACILL-RKGKFYIATHPDINCPSKEGPVPDAGSIMAAIEASTGRKPDLIA--------------GKPNPLV  200 (271)
T ss_dssp             TCCHHHHHHHHHHH-TTTCEEEESCCCSEECCTTSCEECHHHHHHHHHHHHSCCCSEEC--------------STTSTHH
T ss_pred             CcCHHHHHHHHHHH-HCCCeEEEECCCccccCCCCccccccHHHHHHHHHhCCCCcccC--------------CCCCHHH
Confidence            45679999999999 6666  778876542211   2333455667777777666 555              5999999


Q ss_pred             HHHHHHHcCCCCCceEEecCcc-ccc
Q 029593          163 MKLALHVANVDPRHAVRQSSFL-IFY  187 (191)
Q Consensus       163 ~~~~~~~~~~~p~~~i~iGDs~-~~~  187 (191)
                      ++.+++++|++|++|++|||++ ||.
T Consensus       201 ~~~~~~~lgi~~~e~i~iGD~~~nDi  226 (271)
T 1vjr_A          201 VDVISEKFGVPKERMAMVGDRLYTDV  226 (271)
T ss_dssp             HHHHHHHHTCCGGGEEEEESCHHHHH
T ss_pred             HHHHHHHhCCCCceEEEECCCcHHHH
Confidence            9999999999999999999995 984

>2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A

Probab=99.57  E-value=1.6e-16  Score=114.25  Aligned_cols=78  Identities=18%  Similarity=0.067  Sum_probs=59.3

Q ss_pred             CCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeeccc---CCCCCCCCCCCCCCCCCCCCCHHHH
Q 029593           90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFET---MNPNLSKATRPDEFPVLLKPSMDAM  163 (191)
Q Consensus        90 ~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~---~~~~~~~~~~~~~~~~~~kp~~~~~  163 (191)
                      .+.|++.++++.|+++|+   ++||++...++..++.  +..+|+.++.+..   ...              .||+|..+
T Consensus        88 ~~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~~~~l~~--l~~~f~~i~~~~~~~~~~~--------------~KP~p~~~  151 (211)
T 2b82_A           88 IPKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKT--LADNFHIPATNMNPVIFAG--------------DKPGQNTK  151 (211)
T ss_dssp             EECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHH--HHHHTTCCTTTBCCCEECC--------------CCTTCCCS
T ss_pred             CCcHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHH--HHHhcCccccccchhhhcC--------------CCCCHHHH
Confidence            357899999999999886   8999887655555555  4556666532211   111              49999999


Q ss_pred             HHHHHHcCCCCCceEEecCccccc
Q 029593          164 KLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       164 ~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      ..+++++|+    |++|||+.+|.
T Consensus       152 ~~~~~~~g~----~l~VGDs~~Di  171 (211)
T 2b82_A          152 SQWLQDKNI----RIFYGDSDNDI  171 (211)
T ss_dssp             HHHHHHTTE----EEEEESSHHHH
T ss_pred             HHHHHHCCC----EEEEECCHHHH
Confidence            999999998    99999999874

>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0

Probab=99.56  E-value=6.8e-16  Score=109.24  Aligned_cols=67  Identities=12%  Similarity=0.015  Sum_probs=59.6

Q ss_pred             HHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHcCCCC
Q 029593           98 LLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDP  174 (191)
Q Consensus        98 ~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~p  174 (191)
                      .++.|+++|+   ++||++...++..++.+|+..+|+.                       .||++.+++.+++.++++|
T Consensus        54 ~l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~~~~~-----------------------~kpk~~~~~~~~~~~~~~~  110 (191)
T 3n1u_A           54 GLKLLMAAGIQVAIITTAQNAVVDHRMEQLGITHYYKG-----------------------QVDKRSAYQHLKKTLGLND  110 (191)
T ss_dssp             HHHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCEEECS-----------------------CSSCHHHHHHHHHHHTCCG
T ss_pred             HHHHHHHCCCeEEEEeCcChHHHHHHHHHcCCccceeC-----------------------CCChHHHHHHHHHHhCCCH
Confidence            5888999887   9999999999999999999765542                       1888999999999999999


Q ss_pred             CceEEecCccccc
Q 029593          175 RHAVRQSSFLIFY  187 (191)
Q Consensus       175 ~~~i~iGDs~~~~  187 (191)
                      ++|++|||+.||.
T Consensus       111 ~~~~~vGD~~~Di  123 (191)
T 3n1u_A          111 DEFAYIGDDLPDL  123 (191)
T ss_dssp             GGEEEEECSGGGH
T ss_pred             HHEEEECCCHHHH
Confidence            9999999999984

>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}

Probab=99.55  E-value=4.9e-15  Score=105.08  Aligned_cols=68  Identities=15%  Similarity=0.084  Sum_probs=60.1

Q ss_pred             HHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHcCCC
Q 029593           97 NLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVD  173 (191)
Q Consensus        97 ~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~  173 (191)
                      ..++.|+++|+   |+||++...++.+++.+|+..+|+.                       .||++.+++.++++++++
T Consensus        59 ~~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~~~~~~-----------------------~k~k~~~~~~~~~~~~~~  115 (195)
T 3n07_A           59 YGVKALMNAGIEIAIITGRRSQIVENRMKALGISLIYQG-----------------------QDDKVQAYYDICQKLAIA  115 (195)
T ss_dssp             HHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCCEEECS-----------------------CSSHHHHHHHHHHHHCCC
T ss_pred             HHHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCcEEeeC-----------------------CCCcHHHHHHHHHHhCCC
Confidence            35889999987   9999999999999999999755431                       289999999999999999


Q ss_pred             CCceEEecCccccc
Q 029593          174 PRHAVRQSSFLIFY  187 (191)
Q Consensus       174 p~~~i~iGDs~~~~  187 (191)
                      |++|++|||+.||.
T Consensus       116 ~~~~~~vGD~~nDi  129 (195)
T 3n07_A          116 PEQTGYIGDDLIDW  129 (195)
T ss_dssp             GGGEEEEESSGGGH
T ss_pred             HHHEEEEcCCHHHH
Confidence            99999999999984

>3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0

Probab=99.54  E-value=2.6e-15  Score=111.99  Aligned_cols=31  Identities=0%  Similarity=-0.160  Sum_probs=26.9

Q ss_pred             CCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          157 KPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       157 kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      .+|+.+++.+++.+|++|++|++|||+.||.
T Consensus       196 ~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi  226 (279)
T 3mpo_A          196 ASKGGTLSELVDQLGLTADDVMTLGDQGNDL  226 (279)
T ss_dssp             CCHHHHHHHHHHHTTCCGGGEEEC--CCTTH
T ss_pred             CChHHHHHHHHHHcCCCHHHEEEECCchhhH
Confidence            4589999999999999999999999999984

>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13

Probab=99.53  E-value=3.8e-14  Score=109.97  Aligned_cols=97  Identities=16%  Similarity=0.133  Sum_probs=78.2

Q ss_pred             CCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccc--eeeecccCCCCCCCCCCCCCCCCCCCCCHHH
Q 029593           88 LIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFD--QIICFETMNPNLSKATRPDEFPVLLKPSMDA  162 (191)
Q Consensus        88 ~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~--~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~  162 (191)
                      ...++||+.++|+.|+++|+   |+||++...++..++++|+..+|+  .++++++....  ... .......+||+|.+
T Consensus       213 ~~~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~~Fd~~~Ivs~ddv~~~--~~~-~~~~kp~~KP~P~~  289 (384)
T 1qyi_A          213 ILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEA--ENM-YPQARPLGKPNPFS  289 (384)
T ss_dssp             BSSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEECHHHHHHH--HHH-STTSCCCCTTSTHH
T ss_pred             CCCcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChHhcCCCEEEeccccccc--ccc-cccccCCCCCCHHH
Confidence            36889999999999999987   999999999999999999999999  78887764310  000 00000125999999


Q ss_pred             HHHHHHHcC--------------CCCCceEEecCccccc
Q 029593          163 MKLALHVAN--------------VDPRHAVRQSSFLIFY  187 (191)
Q Consensus       163 ~~~~~~~~~--------------~~p~~~i~iGDs~~~~  187 (191)
                      |..+++.++              ++|++|++|||+++|.
T Consensus       290 ~~~a~~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs~~Di  328 (384)
T 1qyi_A          290 YIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADL  328 (384)
T ss_dssp             HHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHH
T ss_pred             HHHHHHHcCCccccccccccccCCCCcCeEEEcCCHHHH
Confidence            999999999              9999999999999874

>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*

Probab=99.53  E-value=8e-17  Score=119.88  Aligned_cols=72  Identities=15%  Similarity=0.151  Sum_probs=59.0

Q ss_pred             CCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q 029593           90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLA  166 (191)
Q Consensus        90 ~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~  166 (191)
                      .++|++.++++.|+++|+   ++||++...++..++.+|+..+|+.+++.+.                     ....+..
T Consensus       144 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~f~~~~~~~k---------------------~~~~k~~  202 (280)
T 3skx_A          144 RIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGLDDYFAEVLPHEK---------------------AEKVKEV  202 (280)
T ss_dssp             EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEECSCCGGGH---------------------HHHHHHH
T ss_pred             CCCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCChhHhHhcCHHHH---------------------HHHHHHH
Confidence            678999999999999987   9999999999999999999999988877543                     2333334


Q ss_pred             HHHcCCCCCceEEecCccccc
Q 029593          167 LHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       167 ~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      .+.+     +|++|||+.||.
T Consensus       203 ~~~~-----~~~~vGD~~nDi  218 (280)
T 3skx_A          203 QQKY-----VTAMVGDGVNDA  218 (280)
T ss_dssp             HTTS-----CEEEEECTTTTH
T ss_pred             HhcC-----CEEEEeCCchhH
Confidence            3333     899999999984

>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*

Probab=99.53  E-value=2.4e-14  Score=100.98  Aligned_cols=67  Identities=15%  Similarity=0.099  Sum_probs=59.7

Q ss_pred             HHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHcCCCC
Q 029593           98 LLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDP  174 (191)
Q Consensus        98 ~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~p  174 (191)
                      +++.|+++|+   ++||++...++..++.+|+..+|+.                       +||++.+++.+++++|++|
T Consensus        61 ~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~~~~~-----------------------~kpk~~~~~~~~~~~g~~~  117 (188)
T 2r8e_A           61 GIRCALTSDIEVAIITGRKAKLVEDRCATLGITHLYQG-----------------------QSNKLIAFSDLLEKLAIAP  117 (188)
T ss_dssp             HHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCEEECS-----------------------CSCSHHHHHHHHHHHTCCG
T ss_pred             HHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCceeecC-----------------------CCCCHHHHHHHHHHcCCCH
Confidence            8889999887   9999999999999999998765531                       3999999999999999999


Q ss_pred             CceEEecCccccc
Q 029593          175 RHAVRQSSFLIFY  187 (191)
Q Consensus       175 ~~~i~iGDs~~~~  187 (191)
                      ++|++|||+.||.
T Consensus       118 ~~~~~iGD~~~Di  130 (188)
T 2r8e_A          118 ENVAYVGDDLIDW  130 (188)
T ss_dssp             GGEEEEESSGGGH
T ss_pred             HHEEEECCCHHHH
Confidence            9999999999985

>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A*

Probab=99.52  E-value=2.3e-16  Score=119.38  Aligned_cols=86  Identities=14%  Similarity=0.050  Sum_probs=68.4

Q ss_pred             CCCCChhHHHHHHhhccCcE--EEecCChHHH--H-HHHhhcC-CCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHH
Q 029593           88 LIKPDPQLRNLLCSITQRKI--IFTNSDRNHA--I-TCLKRLE-IADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMD  161 (191)
Q Consensus        88 ~~~~~~~~~~~l~~l~~~g~--i~t~~~~~~~--~-~~l~~~~-l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~  161 (191)
                      ...++|++.+++..|++.|+  ++||.+....  . ..+...| +..+|+.+++++....              +||+|.
T Consensus       154 ~~~~~~~~~~~l~~l~~~g~~~i~tn~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~--------------~KP~~~  219 (306)
T 2oyc_A          154 EHFSFAKLREACAHLRDPECLLVATDRDPWHPLSDGSRTPGTGSLAAAVETASGRQALVV--------------GKPSPY  219 (306)
T ss_dssp             TTCCHHHHHHHHHHHTSTTSEEEESCCCCEEECTTSCEEECHHHHHHHHHHHHTCCCEEC--------------STTSTH
T ss_pred             CCCCHHHHHHHHHHHHcCCCEEEEEcCCccccCCCCCcCCCCcHHHHHHHHHhCCCceee--------------CCCCHH
Confidence            35678999999999998776  8888876533  1 2334444 6667888887776655              599999


Q ss_pred             HHHHHHHHcCCCCCceEEecCcc-ccc
Q 029593          162 AMKLALHVANVDPRHAVRQSSFL-IFY  187 (191)
Q Consensus       162 ~~~~~~~~~~~~p~~~i~iGDs~-~~~  187 (191)
                      +++.+++++|++|++|++|||++ ||.
T Consensus       220 ~~~~~~~~lgi~~~e~l~vGD~~~~Di  246 (306)
T 2oyc_A          220 MFECITENFSIDPARTLMVGDRLETDI  246 (306)
T ss_dssp             HHHHHHHHSCCCGGGEEEEESCTTTHH
T ss_pred             HHHHHHHHcCCChHHEEEECCCchHHH
Confidence            99999999999999999999997 884

>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I

Probab=99.51  E-value=4.8e-16  Score=116.68  Aligned_cols=73  Identities=5%  Similarity=-0.012  Sum_probs=62.6

Q ss_pred             CCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q 029593           89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKL  165 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~  165 (191)
                      ..++||+.++|+.|+++|+   ++||++...++..++.+|+..+|+.++.                     +++    ..
T Consensus       162 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~i~~---------------------~~K----~~  216 (287)
T 3a1c_A          162 DTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIAEVLP---------------------HQK----SE  216 (287)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEECSCCT---------------------TCH----HH
T ss_pred             cccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCceeeeecCh---------------------HHH----HH
Confidence            5789999999999999987   9999999999999999999888776541                     332    56


Q ss_pred             HHHHcCCCCCceEEecCccccc
Q 029593          166 ALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       166 ~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      +++.++.. ++|++|||+.||.
T Consensus       217 ~~~~l~~~-~~~~~vGDs~~Di  237 (287)
T 3a1c_A          217 EVKKLQAK-EVVAFVGDGINDA  237 (287)
T ss_dssp             HHHHHTTT-CCEEEEECTTTCH
T ss_pred             HHHHHhcC-CeEEEEECCHHHH
Confidence            78888988 9999999999984

>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}

Probab=99.51  E-value=1.7e-16  Score=118.79  Aligned_cols=81  Identities=16%  Similarity=0.180  Sum_probs=65.5

Q ss_pred             hhHHHHHHhhccCcE--EEecCChHHH--H--HHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q 029593           93 PQLRNLLCSITQRKI--IFTNSDRNHA--I--TCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLA  166 (191)
Q Consensus        93 ~~~~~~l~~l~~~g~--i~t~~~~~~~--~--~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~  166 (191)
                      +....+++.|+++|+  ++||++....  .  ..++..++..+|+.+++++....              +||+|.+|+.+
T Consensus       148 ~~~~~l~~~L~~~g~~~i~tn~~~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~--------------~KP~p~~~~~a  213 (284)
T 2hx1_A          148 HDLNKTVNLLRKRTIPAIVANTDNTYPLTKTDVAIAIGGVATMIESILGRRFIRF--------------GKPDSQMFMFA  213 (284)
T ss_dssp             HHHHHHHHHHHHCCCCEEEECCCSEEECSSSCEEECHHHHHHHHHHHHCSCEEEE--------------STTSSHHHHHH
T ss_pred             ccHHHHHHHHhcCCCeEEEECCCccccCcCCCccccCChHHHHHHHHhCCceeEe--------------cCCCHHHHHHH
Confidence            366677778888887  9999887654  2  12356678888999998887665              59999999999


Q ss_pred             HHHc----CCCCCceEEecCcc-ccc
Q 029593          167 LHVA----NVDPRHAVRQSSFL-IFY  187 (191)
Q Consensus       167 ~~~~----~~~p~~~i~iGDs~-~~~  187 (191)
                      ++++    |++|++|+||||++ +|-
T Consensus       214 ~~~l~~~~~~~~~~~~~VGD~~~~Di  239 (284)
T 2hx1_A          214 YDMLRQKMEISKREILMVGDTLHTDI  239 (284)
T ss_dssp             HHHHHTTSCCCGGGEEEEESCTTTHH
T ss_pred             HHHHhhccCCCcceEEEECCCcHHHH
Confidence            9999    99999999999996 763

>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A

Probab=99.50  E-value=4.2e-15  Score=110.14  Aligned_cols=84  Identities=19%  Similarity=0.089  Sum_probs=54.7

Q ss_pred             CCChhHHHHHHhhccCcE-EEecCChHHHHH---HHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q 029593           90 KPDPQLRNLLCSITQRKI-IFTNSDRNHAIT---CLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKL  165 (191)
Q Consensus        90 ~~~~~~~~~l~~l~~~g~-i~t~~~~~~~~~---~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~  165 (191)
                      ..++++.+.+..++..-. ++||.+......   .....++..+|+.+++.+....              +||++.+++.
T Consensus       125 ~~~~~~~~~~~~l~~~~~~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~Kp~~~~~~~  190 (264)
T 3epr_A          125 VTYDKLATATLAIQNGALFIGTNPDLNIPTERGLLPGAGSLNALLEAATRIKPVFI--------------GKPNAIIMNK  190 (264)
T ss_dssp             CCHHHHHHHHHHHHTTCEEEESCCCSEEEETTEEEECHHHHHHHHHHHHSCCCEEC--------------STTSHHHHHH
T ss_pred             CCHHHHHHHHHHHHCCCeEEEEcCCccccCCCceecCccHHHHHHHHHhCCCcccC--------------CCCCHHHHHH
Confidence            345667777766643222 666654321000   0111123345666666665555              5999999999


Q ss_pred             HHHHcCCCCCceEEecCc-cccc
Q 029593          166 ALHVANVDPRHAVRQSSF-LIFY  187 (191)
Q Consensus       166 ~~~~~~~~p~~~i~iGDs-~~~~  187 (191)
                      +++++|++|+++++|||+ .||.
T Consensus       191 ~~~~~~~~~~~~~~vGD~~~~Di  213 (264)
T 3epr_A          191 ALEILNIPRNQAVMVGDNYLTDI  213 (264)
T ss_dssp             HHHHHTSCGGGEEEEESCTTTHH
T ss_pred             HHHHhCcCcccEEEECCCcHHHH
Confidence            999999999999999999 5884

>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}

Probab=99.50  E-value=1.4e-15  Score=112.77  Aligned_cols=82  Identities=13%  Similarity=-0.034  Sum_probs=65.1

Q ss_pred             CCCChhHHHHHHhhccCcE--EEecCChHHH--HHHHhh-cCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHH
Q 029593           89 IKPDPQLRNLLCSITQRKI--IFTNSDRNHA--ITCLKR-LEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAM  163 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~--i~t~~~~~~~--~~~l~~-~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~  163 (191)
                      ..++|++.+++..|+ +|.  ++||++....  ...+.. .++..+|+.+++++....              +||+|.+|
T Consensus       129 ~~~~~~~~~~l~~L~-~g~~~i~tn~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~--------------~KP~~~~~  193 (263)
T 1zjj_A          129 DLTYEKLKYATLAIR-NGATFIGTNPDATLPGEEGIYPGAGSIIAALKVATNVEPIII--------------GKPNEPMY  193 (263)
T ss_dssp             TCBHHHHHHHHHHHH-TTCEEEESCCCSEEEETTEEEECHHHHHHHHHHHHCCCCEEC--------------STTSHHHH
T ss_pred             CCCHHHHHHHHHHHH-CCCEEEEECCCccccCCCCCcCCcHHHHHHHHHHhCCCccEe--------------cCCCHHHH
Confidence            567899999999999 776  8898877543  222333 456677888888776555              59999999


Q ss_pred             HHHHHHcCCCCCceEEecCcc-ccc
Q 029593          164 KLALHVANVDPRHAVRQSSFL-IFY  187 (191)
Q Consensus       164 ~~~~~~~~~~p~~~i~iGDs~-~~~  187 (191)
                      +.++++  ++|++++||||++ +|.
T Consensus       194 ~~~~~~--~~~~~~~~VGD~~~~Di  216 (263)
T 1zjj_A          194 EVVREM--FPGEELWMVGDRLDTDI  216 (263)
T ss_dssp             HHHHHH--STTCEEEEEESCTTTHH
T ss_pred             HHHHHh--CCcccEEEECCChHHHH
Confidence            999999  9999999999996 773

>2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens}

Probab=99.49  E-value=5e-15  Score=109.37  Aligned_cols=32  Identities=28%  Similarity=0.170  Sum_probs=30.6

Q ss_pred             CCCCHHHHHHHHHHcCCCCCceEEecCcc-ccc
Q 029593          156 LKPSMDAMKLALHVANVDPRHAVRQSSFL-IFY  187 (191)
Q Consensus       156 ~kp~~~~~~~~~~~~~~~p~~~i~iGDs~-~~~  187 (191)
                      +||++.+++.+++.+|++|++|++|||+. ||.
T Consensus       189 ~kpk~~~~~~~~~~lgi~~~~~i~iGD~~~nDi  221 (271)
T 2x4d_A          189 GKPSPEFFKSALQAIGVEAHQAVMIGDDIVGDV  221 (271)
T ss_dssp             STTCHHHHHHHHHHHTCCGGGEEEEESCTTTTH
T ss_pred             cCCCHHHHHHHHHHhCCCcceEEEECCCcHHHH
Confidence            59999999999999999999999999998 984

>3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0

Probab=99.49  E-value=3.1e-14  Score=106.68  Aligned_cols=32  Identities=6%  Similarity=-0.150  Sum_probs=30.0

Q ss_pred             CCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          156 LKPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       156 ~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      +.+|+.+++.+++.+|++|++|++|||+.||.
T Consensus       200 ~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi  231 (290)
T 3dnp_A          200 GVSKEAGLALVASELGLSMDDVVAIGHQYDDL  231 (290)
T ss_dssp             TCCHHHHHHHHHHHTTCCGGGEEEEECSGGGH
T ss_pred             CCCHHHHHHHHHHHcCCCHHHEEEECCchhhH
Confidence            47789999999999999999999999999984

>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0

Probab=99.48  E-value=2.4e-14  Score=106.01  Aligned_cols=84  Identities=13%  Similarity=-0.029  Sum_probs=56.2

Q ss_pred             CCChhHHHHHHhhccCcE-EEecCChHHHHH---HHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q 029593           90 KPDPQLRNLLCSITQRKI-IFTNSDRNHAIT---CLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKL  165 (191)
Q Consensus        90 ~~~~~~~~~l~~l~~~g~-i~t~~~~~~~~~---~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~  165 (191)
                      ..++++.+.+..++.... +++|.+......   .....++..+|+.+++.+....              +||++.+++.
T Consensus       126 ~~~~~~~~~~~~l~~~~~~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~kp~~~~~~~  191 (266)
T 3pdw_A          126 ITYEKFAVGCLAIRNGARFISTNGDIAIPTERGLLPGNGSLTSVLTVSTGVQPVFI--------------GKPESIIMEQ  191 (266)
T ss_dssp             CCHHHHHHHHHHHHTTCEEEESCCCCEEEETTEEEECHHHHHHHHHHHHCCCCEEC--------------STTSSHHHHH
T ss_pred             CCHHHHHHHHHHHHCCCeEEEEcCCceeECCCceEecchHHHHHHHHHhCCCcccc--------------CCCCHHHHHH
Confidence            456777777777765333 666655321100   0111123345666666665554              5999999999


Q ss_pred             HHHHcCCCCCceEEecCc-cccc
Q 029593          166 ALHVANVDPRHAVRQSSF-LIFY  187 (191)
Q Consensus       166 ~~~~~~~~p~~~i~iGDs-~~~~  187 (191)
                      +++.+|++|+++++|||+ .||-
T Consensus       192 ~~~~lgi~~~~~~~iGD~~~~Di  214 (266)
T 3pdw_A          192 AMRVLGTDVSETLMVGDNYATDI  214 (266)
T ss_dssp             HHHHHTCCGGGEEEEESCTTTHH
T ss_pred             HHHHcCCChhhEEEECCCcHHHH
Confidence            999999999999999999 6984

>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10

Probab=99.46  E-value=1.4e-13  Score=100.12  Aligned_cols=155  Identities=11%  Similarity=-0.010  Sum_probs=86.6

Q ss_pred             ceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHh--------CCCHHHHHHHHHHHHHHhcccHHHHHHcCCCCCccch
Q 029593            5 FNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKC--------GFSETKASSLRVELFKAYGSTLAGLRALGYDIGADDY   76 (191)
Q Consensus         5 ~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~--------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (191)
                      +|+|+||+||||++++..+.....+++++.  +..        |.+.......    ....+........-+..+    +
T Consensus         3 ~kli~~DlDGTLl~~~~~i~~~~~~al~~l--~~~G~~v~i~TGR~~~~~~~~----~~~l~~~~~~i~~nGa~i----~   72 (231)
T 1wr8_A            3 IKAISIDIDGTITYPNRMIHEKALEAIRRA--ESLGIPIMLVTGNTVQFAEAA----SILIGTSGPVVAEDGGAI----S   72 (231)
T ss_dssp             CCEEEEESTTTTBCTTSCBCHHHHHHHHHH--HHTTCCEEEECSSCHHHHHHH----HHHHTCCSCEEEGGGTEE----E
T ss_pred             eeEEEEECCCCCCCCCCcCCHHHHHHHHHH--HHCCCEEEEEcCCChhHHHHH----HHHcCCCCeEEEeCCcEE----E
Confidence            799999999999999876666666655542  223        4444433322    122221100000000000    0


Q ss_pred             hhhhhcCCCCCCCCCChhHHHHHHhhc-cC-cE--------------EEe-cCChHHHHHHHhhcCCCcccceeeecccC
Q 029593           77 HGFVHGRLPYDLIKPDPQLRNLLCSIT-QR-KI--------------IFT-NSDRNHAITCLKRLEIADCFDQIICFETM  139 (191)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~l~~l~-~~-g~--------------i~t-~~~~~~~~~~l~~~~l~~~f~~i~~~~~~  139 (191)
                      .   ....... ... +.+.++++.++ +. |+              +++ +...+.++..++.++  ..++.+ ++...
T Consensus        73 ~---~~~~~~~-~~l-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~  144 (231)
T 1wr8_A           73 Y---KKKRIFL-ASM-DEEWILWNEIRKRFPNARTSYTMPDRRAGLVIMRETINVETVREIINELN--LNLVAV-DSGFA  144 (231)
T ss_dssp             E---TTEEEES-CCC-SHHHHHHHHHHHHCTTCCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTT--CSCEEE-ECSSC
T ss_pred             e---CCEEEEe-ccH-HHHHHHHHHHHHhCCCceEEecCCCceeeEEEECCCCCHHHHHHHHHhcC--CcEEEE-ecCcE
Confidence            0   0000001 112 66777777666 43 32              333 336666777777754  345544 22110


Q ss_pred             CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          140 NPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       140 ~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      .          +....++||+.+++.+++++|++|+++++|||+.||.
T Consensus       145 ~----------ei~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~  182 (231)
T 1wr8_A          145 I----------HVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGENDL  182 (231)
T ss_dssp             E----------EEECTTCCHHHHHHHHHHHHTSCGGGEEEEECSGGGH
T ss_pred             E----------EEecCCCChHHHHHHHHHHcCCCHHHEEEECCCHHHH
Confidence            0          0111259999999999999999999999999999985

>3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0

Probab=99.45  E-value=1.4e-14  Score=107.47  Aligned_cols=32  Identities=9%  Similarity=-0.198  Sum_probs=30.3

Q ss_pred             CCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          156 LKPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       156 ~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      +++|+.+++.+++.+|++|+++++|||+.||-
T Consensus       198 ~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi  229 (274)
T 3fzq_A          198 DFHKGKAIKRLQERLGVTQKETICFGDGQNDI  229 (274)
T ss_dssp             TCSHHHHHHHHHHHHTCCSTTEEEECCSGGGH
T ss_pred             CCCHHHHHHHHHHHcCCCHHHEEEECCChhHH
Confidence            58899999999999999999999999999984

>3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis}

Probab=99.44  E-value=1.8e-13  Score=95.67  Aligned_cols=113  Identities=14%  Similarity=0.192  Sum_probs=63.6

Q ss_pred             ceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccHHHHHHcCCCCCccchhhhhhcCC
Q 029593            5 FNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLRALGYDIGADDYHGFVHGRL   84 (191)
Q Consensus         5 ~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (191)
                      .++|+|||||||+|+.+.+..++.+        .+|.+..... .     .  +......  ++  ...+.+...+....
T Consensus         4 ~~~viFD~DGtL~Ds~~~~~~~~~~--------~~g~~~~~~~-~-----~--g~~~~~~--~~--~~~~~~~~~~~~~~   63 (180)
T 3bwv_A            4 RQRIAIDMDEVLADTLGAVVKAVNE--------RADLNIKMES-L-----N--GKKLKHM--IP--EHEGLVMDILKEPG   63 (180)
T ss_dssp             CCEEEEETBTTTBCHHHHHHHHHHH--------HSCCCCCGGG-C-----T--TCCC------------CHHHHHHHSTT
T ss_pred             ccEEEEeCCCcccccHHHHHHHHHH--------HhCCCCCHHH-H-----c--CccHHHH--CC--chHHHHHHHHhCcc
Confidence            4899999999999999887766663        3454321100 0     0  1110000  00  11122333322211


Q ss_pred             CCCCCCCChhHHHHHHhhccC-cE-EEecC---ChH--HHHHHHhh-cCCCcccceeeecc
Q 029593           85 PYDLIKPDPQLRNLLCSITQR-KI-IFTNS---DRN--HAITCLKR-LEIADCFDQIICFE  137 (191)
Q Consensus        85 ~~~~~~~~~~~~~~l~~l~~~-g~-i~t~~---~~~--~~~~~l~~-~~l~~~f~~i~~~~  137 (191)
                      .....+++||+.++|+.|++. .+ |+||+   ...  .....++. ++...+++.+++++
T Consensus        64 ~~~~~~~~pg~~e~L~~L~~~~~~~i~T~~~~~~~~~~~~~~~l~~~f~~~~~~~~i~~~~  124 (180)
T 3bwv_A           64 FFRNLDVMPHAQEVVKQLNEHYDIYIATAAMDVPTSFHDKYEWLLEYFPFLDPQHFVFCGR  124 (180)
T ss_dssp             GGGSCCBCTTHHHHHHHHTTTSEEEEEECC--CCSHHHHHHHHHHHHCTTSCGGGEEECSC
T ss_pred             hhccCCCCcCHHHHHHHHHhcCCEEEEeCCCCcchHHHHHHHHHHHHcCCCCcccEEEeCC
Confidence            223478999999999999985 22 99988   322  22444544 56666778888765

>2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A

Probab=99.44  E-value=1.7e-13  Score=101.13  Aligned_cols=79  Identities=9%  Similarity=-0.010  Sum_probs=58.1

Q ss_pred             CCCChhHHHHHHhhccCcE---EEecCC---hHHHHHHHhhcCCC--cccceeeecccCCCCCCCCCCCCCCCCCCCCCH
Q 029593           89 IKPDPQLRNLLCSITQRKI---IFTNSD---RNHAITCLKRLEIA--DCFDQIICFETMNPNLSKATRPDEFPVLLKPSM  160 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~---i~t~~~---~~~~~~~l~~~~l~--~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~  160 (191)
                      ..+.|++.++|+.|+++|+   ++||++   ...+...++.+|+.  .+++.+++.+..                .||.+
T Consensus       100 ~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~~v~~~~vi~~~~~~----------------~K~~~  163 (258)
T 2i33_A          100 AEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAPQATKEHILLQDPKE----------------KGKEK  163 (258)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCSSCSTTTEEEECTTC----------------CSSHH
T ss_pred             CCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCCcCCCceEEECCCCC----------------CCcHH
Confidence            5788999999999999987   999987   55677788889998  677777775532                26544


Q ss_pred             HHHHHHHHHcCCCCCceEEecCcccccc
Q 029593          161 DAMKLALHVANVDPRHAVRQSSFLIFYF  188 (191)
Q Consensus       161 ~~~~~~~~~~~~~p~~~i~iGDs~~~~~  188 (191)
                        ...+. ..+  .+.|++|||+.+|.-
T Consensus       164 --~~~~~-~~~--~~~~l~VGDs~~Di~  186 (258)
T 2i33_A          164 --RRELV-SQT--HDIVLFFGDNLSDFT  186 (258)
T ss_dssp             --HHHHH-HHH--EEEEEEEESSGGGST
T ss_pred             --HHHHH-HhC--CCceEEeCCCHHHhc
Confidence              33333 223  345999999999864

>2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A

Probab=99.42  E-value=1.5e-14  Score=106.92  Aligned_cols=35  Identities=0%  Similarity=-0.205  Sum_probs=32.1

Q ss_pred             CCCCCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          153 PVLLKPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       153 ~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      ...++||+.+++.+++++|++|++|++|||+.||.
T Consensus       182 ~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~  216 (261)
T 2rbk_A          182 TAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDI  216 (261)
T ss_dssp             ESTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGH
T ss_pred             cCCCCChHHHHHHHHHHcCCCHHHEEEECCCHHHH
Confidence            44578999999999999999999999999999985

>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*

Probab=99.13  E-value=1.6e-14  Score=107.18  Aligned_cols=74  Identities=11%  Similarity=0.158  Sum_probs=63.9

Q ss_pred             CCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q 029593           89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKL  165 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~  165 (191)
                      ..++|++.++++.|+++|+   ++||.+...++.+++.+|+..+|+.++.                         ..+..
T Consensus       135 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~f~~~~p-------------------------~~k~~  189 (263)
T 2yj3_A          135 DVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQEYYSNLSP-------------------------EDKVR  189 (263)
Confidence            4689999999999999987   9999999999999999999887776541                         23466


Q ss_pred             HHHHcCCCCCceEEecCccccc
Q 029593          166 ALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       166 ~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      +++.++.+|++|+||||+.||-
T Consensus       190 ~~~~l~~~~~~~~~VGD~~~D~  211 (263)
T 2yj3_A          190 IIEKLKQNGNKVLMIGDGVNDA  211 (263)
Confidence            8888999999999999999985

>3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans}

Probab=99.38  E-value=2.1e-13  Score=102.97  Aligned_cols=32  Identities=13%  Similarity=-0.234  Sum_probs=29.7

Q ss_pred             CCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          156 LKPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       156 ~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      +.+|+.+++.+++++|++|+++++|||+.||.
T Consensus       226 ~~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi  257 (304)
T 3l7y_A          226 GLHKGWALQQLLKRWNFTSDHLMAFGDGGNDI  257 (304)
T ss_dssp             TCSHHHHHHHHHHHTTCCGGGEEEEECSGGGH
T ss_pred             CCCHHHHHHHHHHHhCcCHHHEEEECCCHHHH
Confidence            46789999999999999999999999999984

>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0

Probab=99.37  E-value=6.7e-14  Score=103.70  Aligned_cols=32  Identities=22%  Similarity=0.225  Sum_probs=30.1

Q ss_pred             CCCCHHHHHHHHHHcCCCCCceEEecCcc-ccc
Q 029593          156 LKPSMDAMKLALHVANVDPRHAVRQSSFL-IFY  187 (191)
Q Consensus       156 ~kp~~~~~~~~~~~~~~~p~~~i~iGDs~-~~~  187 (191)
                      +||++.+++.+++.+|++|+++++|||++ ||.
T Consensus       186 ~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di  218 (268)
T 3qgm_A          186 GKPSEVIMREALDILGLDAKDVAVVGDQIDVDV  218 (268)
T ss_dssp             STTSHHHHHHHHHHHTCCGGGEEEEESCTTTHH
T ss_pred             CCCCHHHHHHHHHHhCCCchhEEEECCCchHHH
Confidence            69999999999999999999999999995 884

>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}

Probab=99.35  E-value=4.7e-13  Score=100.16  Aligned_cols=32  Identities=3%  Similarity=-0.174  Sum_probs=29.8

Q ss_pred             CCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          156 LKPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       156 ~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      +.+|+.+++.+++.+|++++++++|||+.||.
T Consensus       207 ~~~K~~al~~l~~~lgi~~~~~ia~GD~~NDi  238 (285)
T 3pgv_A          207 GVSKGHALEAVAKMLGYTLSDCIAFGDGMNDA  238 (285)
T ss_dssp             TCSHHHHHHHHHHHTTCCGGGEEEEECSGGGH
T ss_pred             CCChHHHHHHHHHHhCCCHHHEEEECCcHhhH
Confidence            46789999999999999999999999999984

>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}

Probab=99.34  E-value=7.3e-13  Score=91.61  Aligned_cols=64  Identities=5%  Similarity=-0.037  Sum_probs=52.4

Q ss_pred             HHHhhccCcE---EEecCChHHHHHHHh--hcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHcCC
Q 029593           98 LLCSITQRKI---IFTNSDRNHAITCLK--RLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANV  172 (191)
Q Consensus        98 ~l~~l~~~g~---i~t~~~~~~~~~~l~--~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~  172 (191)
                      .|+.|+++|+   ++||.  ..++..++  .+++. +    +.+                   .++++.+++.+++++++
T Consensus        44 ~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi~-~----~~g-------------------~~~K~~~l~~~~~~~gi   97 (168)
T 3ewi_A           44 GISLLKKSGIEVRLISER--ACSKQTLSALKLDCK-T----EVS-------------------VSDKLATVDEWRKEMGL   97 (168)
T ss_dssp             HHHHHHHTTCEEEEECSS--CCCHHHHHTTCCCCC-E----ECS-------------------CSCHHHHHHHHHHHTTC
T ss_pred             HHHHHHHCCCEEEEEeCc--HHHHHHHHHhCCCcE-E----EEC-------------------CCChHHHHHHHHHHcCc
Confidence            6889999998   88887  66778888  55653 2    221                   27789999999999999


Q ss_pred             CCCceEEecCccccc
Q 029593          173 DPRHAVRQSSFLIFY  187 (191)
Q Consensus       173 ~p~~~i~iGDs~~~~  187 (191)
                      +|++|++|||+.||.
T Consensus        98 ~~~~~~~vGD~~nDi  112 (168)
T 3ewi_A           98 CWKEVAYLGNEVSDE  112 (168)
T ss_dssp             CGGGEEEECCSGGGH
T ss_pred             ChHHEEEEeCCHhHH
Confidence            999999999999984

>2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A

Probab=99.31  E-value=4.3e-13  Score=98.86  Aligned_cols=32  Identities=6%  Similarity=0.037  Sum_probs=29.2

Q ss_pred             CCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          156 LKPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       156 ~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      +-.|..+++.+++.+|++|++|++||||.||.
T Consensus       181 ~~~K~~~l~~l~~~lgi~~~~~ia~GDs~NDi  212 (258)
T 2pq0_A          181 GGSKAEGIRMMIEKLGIDKKDVYAFGDGLNDI  212 (258)
T ss_dssp             SCCHHHHHHHHHHHHTCCGGGEEEECCSGGGH
T ss_pred             CCChHHHHHHHHHHhCCCHHHEEEECCcHHhH
Confidence            45678999999999999999999999999984

>1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A

Probab=99.29  E-value=3.8e-12  Score=94.56  Aligned_cols=32  Identities=9%  Similarity=-0.073  Sum_probs=30.4

Q ss_pred             CCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          156 LKPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       156 ~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      ++||+.+++.+++.+|++|++|++|||+.||.
T Consensus       189 ~~~K~~~~~~l~~~l~i~~~~~~~~GD~~nD~  220 (271)
T 1rlm_A          189 GLHKANGISRLLKRWDLSPQNVVAIGDSGNDA  220 (271)
T ss_dssp             TCSHHHHHHHHHHHHTCCGGGEEEEECSGGGH
T ss_pred             CCChHHHHHHHHHHhCCCHHHEEEECCcHHHH
Confidence            58999999999999999999999999999985

>3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0

Probab=99.27  E-value=1.6e-12  Score=96.19  Aligned_cols=32  Identities=6%  Similarity=-0.203  Sum_probs=29.9

Q ss_pred             CCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          156 LKPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       156 ~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      +.+|+.+++.+++++|++|+++++|||+.||.
T Consensus       192 ~~~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi  223 (268)
T 3r4c_A          192 GTSKATGLSLFADYYRVKVSEIMACGDGGNDI  223 (268)
T ss_dssp             TCCHHHHHHHHHHHTTCCGGGEEEEECSGGGH
T ss_pred             CCCHHHHHHHHHHHcCCCHHHEEEECCcHHhH
Confidence            46789999999999999999999999999994

>3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A

Probab=99.25  E-value=2.3e-11  Score=89.25  Aligned_cols=80  Identities=10%  Similarity=-0.014  Sum_probs=58.9

Q ss_pred             CCCChhHHHHHHhhccCcE---EEecCCh----HHHHHHHhhcCCCcccc-eeeecccCCCCCCCCCCCCCCCCCCCCCH
Q 029593           89 IKPDPQLRNLLCSITQRKI---IFTNSDR----NHAITCLKRLEIADCFD-QIICFETMNPNLSKATRPDEFPVLLKPSM  160 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~----~~~~~~l~~~~l~~~f~-~i~~~~~~~~~~~~~~~~~~~~~~~kp~~  160 (191)
                      .+++||+.++++.|+++|+   ++||.+.    +.+...++.+|+..+.+ .++.....                 .++.
T Consensus       100 ~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~~Lilr~~~-----------------~~K~  162 (262)
T 3ocu_A          100 SRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNGVEESAFYLKKDK-----------------SAKA  162 (262)
T ss_dssp             CEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCSCCSGGGEEEESSC-----------------SCCH
T ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcCcccccceeccCCC-----------------CChH
Confidence            6889999999999999998   8998754    57888999999987663 33332221                 3345


Q ss_pred             HHHHHHHHHcCCCCCceEEecCcccccc
Q 029593          161 DAMKLALHVANVDPRHAVRQSSFLIFYF  188 (191)
Q Consensus       161 ~~~~~~~~~~~~~p~~~i~iGDs~~~~~  188 (191)
                      .....+.+. |.  ..+++|||+++|+=
T Consensus       163 ~~r~~l~~~-Gy--~iv~~vGD~~~Dl~  187 (262)
T 3ocu_A          163 ARFAEIEKQ-GY--EIVLYVGDNLDDFG  187 (262)
T ss_dssp             HHHHHHHHT-TE--EEEEEEESSGGGGC
T ss_pred             HHHHHHHhc-CC--CEEEEECCChHHhc
Confidence            666666555 43  24999999999974

>3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale}

Probab=99.25  E-value=7e-13  Score=99.17  Aligned_cols=32  Identities=9%  Similarity=-0.068  Sum_probs=29.8

Q ss_pred             CCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          156 LKPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       156 ~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      +.+|+.+++.+++.+|++++++++|||+.||.
T Consensus       209 ~~~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi  240 (283)
T 3dao_A          209 GVSKWTALSYLIDRFDLLPDEVCCFGDNLNDI  240 (283)
T ss_dssp             TCCHHHHHHHHHHHTTCCGGGEEEEECSGGGH
T ss_pred             CCcHHHHHHHHHHHhCCCHHHEEEECCCHHHH
Confidence            46789999999999999999999999999994

>3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida}

Probab=99.21  E-value=4e-11  Score=87.91  Aligned_cols=80  Identities=10%  Similarity=-0.019  Sum_probs=57.2

Q ss_pred             CCCChhHHHHHHhhccCcE---EEecCCh----HHHHHHHhhcCCCcccc-eeeecccCCCCCCCCCCCCCCCCCCCCCH
Q 029593           89 IKPDPQLRNLLCSITQRKI---IFTNSDR----NHAITCLKRLEIADCFD-QIICFETMNPNLSKATRPDEFPVLLKPSM  160 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~----~~~~~~l~~~~l~~~f~-~i~~~~~~~~~~~~~~~~~~~~~~~kp~~  160 (191)
                      .+++||+.+++..|+++|+   ++||.+.    +.+...|+.+|+..+++ .++-....                 ..+.
T Consensus       100 ~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~~Lilr~~~-----------------~~K~  162 (260)
T 3pct_A          100 SAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTGVNDKTLLLKKDK-----------------SNKS  162 (260)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCCCCSTTTEEEESSC-----------------SSSH
T ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcCccccceeEecCCC-----------------CChH
Confidence            6889999999999999997   9998754    57888999999987764 23322211                 2234


Q ss_pred             HHHHHHHHHcCCCCCceEEecCcccccc
Q 029593          161 DAMKLALHVANVDPRHAVRQSSFLIFYF  188 (191)
Q Consensus       161 ~~~~~~~~~~~~~p~~~i~iGDs~~~~~  188 (191)
                      .....+. ..|.  .-+++|||+++|+=
T Consensus       163 ~~r~~L~-~~gy--~iv~~iGD~~~Dl~  187 (260)
T 3pct_A          163 VRFKQVE-DMGY--DIVLFVGDNLNDFG  187 (260)
T ss_dssp             HHHHHHH-TTTC--EEEEEEESSGGGGC
T ss_pred             HHHHHHH-hcCC--CEEEEECCChHHcC
Confidence            4444444 4343  44999999999975

>1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10

Probab=99.15  E-value=7.5e-12  Score=93.53  Aligned_cols=32  Identities=9%  Similarity=-0.066  Sum_probs=29.5

Q ss_pred             CCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          156 LKPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       156 ~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      +-+|+.+++.+++.+|++++++++|||+.||.
T Consensus       196 ~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~  227 (282)
T 1rkq_A          196 RVNKGTGVKSLADVLGIKPEEIMAIGDQENDI  227 (282)
T ss_dssp             TCSHHHHHHHHHHHHTCCGGGEEEEECSGGGH
T ss_pred             CCCCHHHHHHHHHHhCCCHHHEEEECCcHHHH
Confidence            45778999999999999999999999999995

>3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A*

Probab=99.10  E-value=1.5e-11  Score=90.65  Aligned_cols=31  Identities=16%  Similarity=-0.124  Sum_probs=29.2

Q ss_pred             CCCHHHHHHHHHHcCCCC--CceEEecCccccc
Q 029593          157 KPSMDAMKLALHVANVDP--RHAVRQSSFLIFY  187 (191)
Q Consensus       157 kp~~~~~~~~~~~~~~~p--~~~i~iGDs~~~~  187 (191)
                      ++|+.+++.+++.+|+++  +++++|||+.||.
T Consensus       175 ~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~  207 (259)
T 3zx4_A          175 ADKGRAVARLRALWPDPEEARFAVGLGDSLNDL  207 (259)
T ss_dssp             CCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGH
T ss_pred             CCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHH
Confidence            677999999999999999  9999999999995

>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A

Probab=99.10  E-value=1.3e-10  Score=84.20  Aligned_cols=32  Identities=3%  Similarity=-0.233  Sum_probs=29.7

Q ss_pred             CCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          156 LKPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       156 ~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      +.+|+.+++.+++.++++++++++|||+.||.
T Consensus       151 ~~~K~~~l~~l~~~~~~~~~~~~~iGD~~nD~  182 (227)
T 1l6r_A          151 GEDKAFAVNKLKEMYSLEYDEILVIGDSNNDM  182 (227)
T ss_dssp             TCSHHHHHHHHHHHTTCCGGGEEEECCSGGGH
T ss_pred             CCCHHHHHHHHHHHhCcCHHHEEEECCcHHhH
Confidence            46789999999999999999999999999995

>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10

Probab=99.05  E-value=7.5e-11  Score=88.31  Aligned_cols=32  Identities=13%  Similarity=-0.069  Sum_probs=29.1

Q ss_pred             CCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          156 LKPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       156 ~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      +-+|+.+++.+++.+|+++++|++|||+.||.
T Consensus       214 ~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~  245 (288)
T 1nrw_A          214 KASKGQALKRLAKQLNIPLEETAAVGDSLNDK  245 (288)
T ss_dssp             TCSHHHHHHHHHHHTTCCGGGEEEEESSGGGH
T ss_pred             CCChHHHHHHHHHHhCCCHHHEEEEcCCHHHH
Confidence            44578999999999999999999999999984

>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A

Probab=99.00  E-value=3.9e-09  Score=79.33  Aligned_cols=97  Identities=8%  Similarity=-0.022  Sum_probs=59.0

Q ss_pred             CCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeec----ccCCCCCCCCCCC-CCCCCCCCCC
Q 029593           88 LIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICF----ETMNPNLSKATRP-DEFPVLLKPS  159 (191)
Q Consensus        88 ~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~----~~~~~~~~~~~~~-~~~~~~~kp~  159 (191)
                      .+++.|++.+++..|+++|+   ++|++....++.+++.+|+......+++.    ++...   ..... .......|+.
T Consensus       139 ~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~~~~i~~n~l~~~~~~~---~~~~~~~~i~~~~k~~  215 (297)
T 4fe3_A          139 DVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFDENGV---LKGFKGELIHVFNKHD  215 (297)
T ss_dssp             CCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCTTEEEEEECEEECTTSB---EEEECSSCCCTTCHHH
T ss_pred             CCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCcccceEEeeeEEEcccce---eEeccccccchhhccc
Confidence            47899999999999999998   99999999999999999875432222221    11000   00000 0011112332


Q ss_pred             HHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          160 MDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       160 ~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      +..-......+.-...+++++|||.||-
T Consensus       216 ~~~k~~~~~~~~~~~~~v~~vGDGiNDa  243 (297)
T 4fe3_A          216 GALKNTDYFSQLKDNSNIILLGDSQGDL  243 (297)
T ss_dssp             HHHTCHHHHHHTTTCCEEEEEESSGGGG
T ss_pred             HHHHHHHHHHhhccCCEEEEEeCcHHHH
Confidence            2222222233444567899999999994

>1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10

Probab=98.94  E-value=2e-10  Score=85.09  Aligned_cols=32  Identities=9%  Similarity=-0.169  Sum_probs=29.5

Q ss_pred             CCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          156 LKPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       156 ~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      +.+|+.+++.+++.+|++|++|++|||+.||.
T Consensus       188 ~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~  219 (268)
T 1nf2_A          188 NVDKGKALRFLRERMNWKKEEIVVFGDNENDL  219 (268)
T ss_dssp             TCCHHHHHHHHHHHHTCCGGGEEEEECSHHHH
T ss_pred             CCChHHHHHHHHHHcCCCHHHeEEEcCchhhH
Confidence            46778999999999999999999999999985

>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A

Probab=98.94  E-value=8.5e-10  Score=83.01  Aligned_cols=82  Identities=4%  Similarity=-0.131  Sum_probs=66.5

Q ss_pred             CCCChhHHHHHHhhccCcE---EEecCChHH---HHHHHhh--------cCCCcccceeeecccCCCCCCCCCCCCCCCC
Q 029593           89 IKPDPQLRNLLCSITQRKI---IFTNSDRNH---AITCLKR--------LEIADCFDQIICFETMNPNLSKATRPDEFPV  154 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~~---~~~~l~~--------~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~  154 (191)
                      ..++||+.++|+.|+++|+   ++||++...   +...++.        +|+  .|+.+++++...              
T Consensus       187 ~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~--------------  250 (301)
T 1ltq_A          187 DVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGV--PLVMQCQREQGD--------------  250 (301)
T ss_dssp             CCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCC--CCSEEEECCTTC--------------
T ss_pred             cCCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhcccccccccCC--CchheeeccCCC--------------
Confidence            4679999999999999987   899987543   4566777        888  588888776543              


Q ss_pred             CCCCCHHHHHHHHHHcCCCCCc-eEEecCccccc
Q 029593          155 LLKPSMDAMKLALHVANVDPRH-AVRQSSFLIFY  187 (191)
Q Consensus       155 ~~kp~~~~~~~~~~~~~~~p~~-~i~iGDs~~~~  187 (191)
                       .||+|.++..++++++.++.+ +++|||+.+|-
T Consensus       251 -~kp~p~~~~~~~~~~~~~~~~~~~~vgD~~~di  283 (301)
T 1ltq_A          251 -TRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVV  283 (301)
T ss_dssp             -CSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHH
T ss_pred             -CcHHHHHHHHHHHHHhccccceEEEeCCcHHHH
Confidence             399999999999999887755 79999998873

>1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24

Probab=98.87  E-value=1e-09  Score=83.80  Aligned_cols=37  Identities=8%  Similarity=0.137  Sum_probs=28.5

Q ss_pred             CCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCC
Q 029593           89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEI  126 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l  126 (191)
                      ..+.+++.++++.|++ |+   ++|+.....+....+.+++
T Consensus       102 ~~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~~~~  141 (332)
T 1y8a_A          102 AKFVPDAEKAMATLQE-RWTPVVISTSYTQYLRRTASMIGV  141 (332)
T ss_dssp             CCBCTTHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHTTC
T ss_pred             CCCHHHHHHHHHHHHc-CCcEEEEECCceEEEcccchhhhh
Confidence            3678999999999999 86   7777766666666666655

>2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10

Probab=98.82  E-value=1e-09  Score=82.79  Aligned_cols=32  Identities=6%  Similarity=-0.081  Sum_probs=29.6

Q ss_pred             CCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          156 LKPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       156 ~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      +-+|+.+++.+++.+|++++++++|||+.||.
T Consensus       222 ~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~  253 (301)
T 2b30_A          222 GHDKYTGINYLLKHYNISNDQVLVVGDAENDI  253 (301)
T ss_dssp             TCCHHHHHHHHHHHTTCCGGGEEEEECSGGGH
T ss_pred             CCCcHHHHHHHHHHcCCCHHHEEEECCCHHHH
Confidence            45779999999999999999999999999995

>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}

Probab=98.76  E-value=6.8e-09  Score=80.68  Aligned_cols=98  Identities=8%  Similarity=-0.008  Sum_probs=61.4

Q ss_pred             CCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCccc--ceeeecccC--CCCCCCCCCC-CCCCCCCCCCH
Q 029593           89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCF--DQIICFETM--NPNLSKATRP-DEFPVLLKPSM  160 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f--~~i~~~~~~--~~~~~~~~~~-~~~~~~~kp~~  160 (191)
                      +.++|++++++..|+++|+   |+|++....++.+.+.+|+..-+  +.+++....  .-+.+++.+. ..+...+.-|+
T Consensus       220 ir~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~~y~ip~~~Vig~~l~~~~dG~~tg~~~~~~p~~~~~gK~  299 (385)
T 4gxt_A          220 IRTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNNNYKMKEEKVLGLRLMKDDEGKILPKFDKDFPISIREGKV  299 (385)
T ss_dssp             CEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTSSCCCCGGGEEEECEEECTTCCEEEEECTTSCCCSTHHHH
T ss_pred             ceeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCcccCCCcceEEEeEEEEecCCceeeeecCccceeCCCchH
Confidence            4579999999999999998   99999999999999998763211  233332210  0001111110 11122233356


Q ss_pred             HHHHHHHHHcCCCCCceEEecCccccc
Q 029593          161 DAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       161 ~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      ..++..+.. +.....++++|||.||+
T Consensus       300 ~~i~~~~~~-~~~~~~i~a~GDs~~D~  325 (385)
T 4gxt_A          300 QTINKLIKN-DRNYGPIMVGGDSDGDF  325 (385)
T ss_dssp             HHHHHHTCC-TTEECCSEEEECSGGGH
T ss_pred             HHHHHHHHh-cCCCCcEEEEECCHhHH
Confidence            666665543 34556799999999996

>2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens}

Probab=98.69  E-value=1.5e-09  Score=76.65  Aligned_cols=82  Identities=15%  Similarity=0.090  Sum_probs=71.3

Q ss_pred             CCCChhHHHHHHhhccC-cE-EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q 029593           89 IKPDPQLRNLLCSITQR-KI-IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLA  166 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~-g~-i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~  166 (191)
                      +..+||+.++|+.|++. .+ |+|++...+++.+++.+++..+|+.++++++....              |   ..+.+.
T Consensus        67 v~~RPgv~efL~~l~~~~~i~I~Tss~~~~a~~vl~~ld~~~~f~~~l~rd~~~~~--------------k---~~~lK~  129 (195)
T 2hhl_A           67 VLKRPHVDEFLQRMGQLFECVLFTASLAKYADPVADLLDRWGVFRARLFRESCVFH--------------R---GNYVKD  129 (195)
T ss_dssp             EEECTTHHHHHHHHHHHSEEEEECSSCHHHHHHHHHHHCCSSCEEEEECGGGCEEE--------------T---TEEECC
T ss_pred             EEeCcCHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCcccEEEEEEcccceec--------------C---Cceeee
Confidence            56789999999999986 23 99999999999999999999999999988765532              3   467788


Q ss_pred             HHHcCCCCCceEEecCccccc
Q 029593          167 LHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       167 ~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      ++.+|.+|++|++|||+++.+
T Consensus       130 L~~Lg~~~~~~vivDDs~~~~  150 (195)
T 2hhl_A          130 LSRLGRELSKVIIVDNSPASY  150 (195)
T ss_dssp             GGGSSSCGGGEEEEESCGGGG
T ss_pred             HhHhCCChhHEEEEECCHHHh
Confidence            899999999999999999876

>2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A

Probab=98.62  E-value=3.3e-09  Score=74.08  Aligned_cols=83  Identities=16%  Similarity=0.111  Sum_probs=70.5

Q ss_pred             CCCChhHHHHHHhhccC-cE-EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q 029593           89 IKPDPQLRNLLCSITQR-KI-IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLA  166 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~-g~-i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~  166 (191)
                      ..++||+.++|+.+++. .+ |+|++...+++.+++.++...+|+.+++.++....              |   ..+.+.
T Consensus        54 v~~rPg~~efL~~l~~~~~i~I~T~~~~~~a~~vl~~ld~~~~f~~~~~rd~~~~~--------------k---~~~~k~  116 (181)
T 2ght_A           54 VLKRPHVDEFLQRMGELFECVLFTASLAKYADPVADLLDKWGAFRARLFRESCVFH--------------R---GNYVKD  116 (181)
T ss_dssp             EEECTTHHHHHHHHHHHSEEEEECSSCHHHHHHHHHHHCTTCCEEEEECGGGSEEE--------------T---TEEECC
T ss_pred             EEeCCCHHHHHHHHHhCCCEEEEcCCCHHHHHHHHHHHCCCCcEEEEEeccCceec--------------C---CcEecc
Confidence            57899999999999886 23 99999999999999999999999999887765431              2   356778


Q ss_pred             HHHcCCCCCceEEecCcccccc
Q 029593          167 LHVANVDPRHAVRQSSFLIFYF  188 (191)
Q Consensus       167 ~~~~~~~p~~~i~iGDs~~~~~  188 (191)
                      ++.+|.+|++|++|||++.++=
T Consensus       117 L~~Lg~~~~~~vivdDs~~~~~  138 (181)
T 2ght_A          117 LSRLGRDLRRVLILDNSPASYV  138 (181)
T ss_dssp             GGGTCSCGGGEEEECSCGGGGT
T ss_pred             HHHhCCCcceEEEEeCCHHHhc
Confidence            8899999999999999998763

>1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10

Probab=98.48  E-value=1.7e-08  Score=74.96  Aligned_cols=32  Identities=3%  Similarity=-0.173  Sum_probs=29.5

Q ss_pred             CCCCHHHHHHHHHHcC-CCCCc--eEEecCccccc
Q 029593          156 LKPSMDAMKLALHVAN-VDPRH--AVRQSSFLIFY  187 (191)
Q Consensus       156 ~kp~~~~~~~~~~~~~-~~p~~--~i~iGDs~~~~  187 (191)
                      +-+|+.+++.+++.+| +++++  +++|||+.||.
T Consensus       187 ~~~K~~~l~~l~~~~~~~~~~~~~~~~~GD~~nD~  221 (275)
T 1xvi_A          187 SAGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDA  221 (275)
T ss_dssp             TCCHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGH
T ss_pred             CCCHHHHHHHHHHHhhhcccccCcEEEECCChhhH
Confidence            4678999999999999 99999  99999999995

>3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe}

Probab=98.23  E-value=1.8e-07  Score=72.13  Aligned_cols=78  Identities=18%  Similarity=0.189  Sum_probs=59.0

Q ss_pred             CCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCc-ccc-eeeecccCCCCCCCCCCCCCCCCCCCCCHHHH
Q 029593           89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIAD-CFD-QIICFETMNPNLSKATRPDEFPVLLKPSMDAM  163 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~-~f~-~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~  163 (191)
                      +...||+.++|+.+.+ ++   |.|.+...++..+++.++... +|+ .+++.+..+.                    .+
T Consensus        74 v~~RPg~~eFL~~l~~-~yeivI~Tas~~~yA~~vl~~LDp~~~~f~~ri~sr~~~g~--------------------~~  132 (372)
T 3ef0_A           74 IKFRPGLAQFLQKISE-LYELHIYTMGTKAYAKEVAKIIDPTGKLFQDRVLSRDDSGS--------------------LA  132 (372)
T ss_dssp             EEECTTHHHHHHHHHT-TEEEEEECSSCHHHHHHHHHHHCTTSCSSSSCEECTTTSSC--------------------SS
T ss_pred             EEECcCHHHHHHHHhc-CcEEEEEeCCcHHHHHHHHHHhccCCceeeeEEEEecCCCC--------------------cc
Confidence            6789999999999994 44   999999999999999999877 677 4555543211                    12


Q ss_pred             HHHHHHc-CCCCCceEEecCccccc
Q 029593          164 KLALHVA-NVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       164 ~~~~~~~-~~~p~~~i~iGDs~~~~  187 (191)
                      .+-++.+ |.++++|++|.|++.-|
T Consensus       133 ~KdL~~L~~~dl~~viiiDd~~~~~  157 (372)
T 3ef0_A          133 QKSLRRLFPCDTSMVVVIDDRGDVW  157 (372)
T ss_dssp             CCCGGGTCSSCCTTEEEEESCSGGG
T ss_pred             eecHHHhcCCCCceEEEEeCCHHHc
Confidence            2234444 88999999999998643

>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*

Probab=98.09  E-value=1.8e-05  Score=60.09  Aligned_cols=36  Identities=8%  Similarity=0.055  Sum_probs=32.1

Q ss_pred             CCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhc
Q 029593           89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRL  124 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~  124 (191)
                      ..++|++++++..|+++|+   |||.+....++.+.+.+
T Consensus       142 ~~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~  180 (327)
T 4as2_A          142 PRVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADP  180 (327)
T ss_dssp             CEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCG
T ss_pred             cccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhc
Confidence            4689999999999999998   99999999999988763

>4g63_A Cytosolic IMP-GMP specific 5'-nucleotidase; structural genomics, PSI-biology, northeast structural genom consortium, NESG; 2.70A {Legionella pneumophila subsp} PDB: 2bde_A

Probab=98.05  E-value=3.4e-06  Score=66.59  Aligned_cols=96  Identities=11%  Similarity=0.043  Sum_probs=61.7

Q ss_pred             CCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhc---------CCCcccceeeecccCCCCCCCC----------
Q 029593           89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRL---------EIADCFDQIICFETMNPNLSKA----------  146 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~---------~l~~~f~~i~~~~~~~~~~~~~----------  146 (191)
                      +...|.+...|..|+++|.   ++||++..++...+..+         ...++||.|++...... =|+.          
T Consensus       185 i~k~~~l~~~L~~lr~~GKklFLiTNS~~~y~~~~M~y~~~~~~~~g~dWrdlFDvVIv~A~KP~-FF~~~~~~~~v~~~  263 (470)
T 4g63_A          185 VIREKEVVEGLKHFIRYGKKIFILTNSEYSYSKLLLDYALSPFLDKGEHWQGLFEFVITLANKPR-FFYDNLRFLSVNPE  263 (470)
T ss_dssp             EECCHHHHHHHHHHHTTTCEEEEECSSCHHHHHHHHHHHTGGGSCTTCCGGGGCSEEEESCCTTH-HHHSCCCEEEECTT
T ss_pred             hhCCHhHHHHHHHHHHcCCeEEEeeCCCchHHHHHHHhhcccCCCCCCChhhhcCEEEECCCCCC-cccCCCcceEEECC
Confidence            4567999999999999985   99999999988887764         34568999877442100 0000          


Q ss_pred             CCC-CCCCCCCCCC---HHHHHHHHHHcCCCCCceEEecCccc
Q 029593          147 TRP-DEFPVLLKPS---MDAMKLALHVANVDPRHAVRQSSFLI  185 (191)
Q Consensus       147 ~~~-~~~~~~~kp~---~~~~~~~~~~~~~~p~~~i~iGDs~~  185 (191)
                      +.. .......+|.   ..-...+.+.+|....+|++|||++.
T Consensus       264 ~g~l~~~~~~~~~~vY~gGn~~~l~~llg~~g~~VLY~GDhi~  306 (470)
T 4g63_A          264 NGTMTNVHGPIVPGVYQGGNAKKFTEDLGVGGDEILYIGDHIY  306 (470)
T ss_dssp             TCCEEECCSSCCSEEEEECCHHHHHHHTTCCGGGEEEEESCCC
T ss_pred             CCcccccccccCCceeecCcHHHHHHHhCCCCCeEEEECCchH
Confidence            000 0000001111   22355677788999999999999863

>2jc9_A Cytosolic purine 5'-nucleotidase; cytosolic 5-prime nucleotidase II, GMP-IMP specific nucleotidase, CN-II, NT5C2, hydrolase, polymorphism; HET: ADN; 1.5A {Homo sapiens} PDB: 2j2c_A* 2xje_A* 2xjf_A* 2jcm_A* 2xcw_A* 2xcv_A* 2xcx_A 2xjb_A* 2xjc_A* 2xjd_A*

Probab=98.03  E-value=6.5e-06  Score=65.95  Aligned_cols=96  Identities=14%  Similarity=0.072  Sum_probs=63.2

Q ss_pred             CCCCChhHHHHHHhhccCcE--EEecCChHHHHHHHhhc-CC-------------CcccceeeecccCCCCCCCCCCCC-
Q 029593           88 LIKPDPQLRNLLCSITQRKI--IFTNSDRNHAITCLKRL-EI-------------ADCFDQIICFETMNPNLSKATRPD-  150 (191)
Q Consensus        88 ~~~~~~~~~~~l~~l~~~g~--i~t~~~~~~~~~~l~~~-~l-------------~~~f~~i~~~~~~~~~~~~~~~~~-  150 (191)
                      .+...|.+...|..|++.|.  ++||++..++..+++.+ |+             .++||.++.... .+.-+....|- 
T Consensus       244 Yv~kdp~l~~~L~~Lr~~GKlfLiTNS~~~yv~~~m~yllg~~~~~~~~~~~~dWrdlFD~vI~~A~-KP~FF~~~~pfr  322 (555)
T 2jc9_A          244 YVVKDGKLPLLLSRMKEVGKVFLATNSDYKYTDKIMTYLFDFPHGPKPGSSHRPWQSYFDLILVDAR-KPLFFGEGTVLR  322 (555)
T ss_dssp             HBCCCTHHHHHHHHHHHHSEEEEECSSCHHHHHHHHHHHTCSSSSSSTTSCCCCGGGGCSEEEESCC-TTGGGTTCCCEE
T ss_pred             hcCCChHHHHHHHHHHHcCCEEEEeCCChHHHHHHHHHhcCCCccccccccccchhhhCCEEEEeCC-CCCcccCCCcce
Confidence            35677899999999999874  99999999999999887 63             357888665332 11111100000 


Q ss_pred             ---------CCC--CCCCCCHHH-----HHHHHHHcCCCCCceEEecCcc
Q 029593          151 ---------EFP--VLLKPSMDA-----MKLALHVANVDPRHAVRQSSFL  184 (191)
Q Consensus       151 ---------~~~--~~~kp~~~~-----~~~~~~~~~~~p~~~i~iGDs~  184 (191)
                               ...  ..+-.++..     +..+++.+|+.+++|++|||.+
T Consensus       323 ~Vd~~tg~l~~~~~~~~l~~g~vY~gGn~~~~~~llg~~g~eVLYVGDhI  372 (555)
T 2jc9_A          323 QVDTKTGKLKIGTYTGPLQHGIVYSGGSSDTICDLLGAKGKDILYIGDHI  372 (555)
T ss_dssp             EEETTTTEECSSCCCSCCCTTCCEEECCHHHHHHHHTCCGGGEEEEESCC
T ss_pred             EeecCCCccccccccccccCCceeccCCHHHHHHHhCCCCCeEEEECCEe
Confidence                     000  000001112     5889999999999999999986

>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}

Probab=97.94  E-value=7.9e-06  Score=67.64  Aligned_cols=71  Identities=7%  Similarity=0.022  Sum_probs=56.2

Q ss_pred             CCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q 029593           90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLA  166 (191)
Q Consensus        90 ~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~  166 (191)
                      ++.|++.+.++.|+++|+   ++|+.+...++.+.+.+|+...+..+.                     ++.|...++.+
T Consensus       457 ~l~~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~lgi~~~~~~~~---------------------P~~K~~~v~~l  515 (645)
T 3j08_A          457 TLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIAEVL---------------------PHQKSEEVKKL  515 (645)
T ss_dssp             CCTTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEECSCC---------------------TTCHHHHHHHH
T ss_pred             CchhHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCEEEEeCC---------------------HHhHHHHHHHH
Confidence            688999999999999998   899999999999999999964332221                     25556666655


Q ss_pred             HHHcCCCCCceEEecCcccc
Q 029593          167 LHVANVDPRHAVRQSSFLIF  186 (191)
Q Consensus       167 ~~~~~~~p~~~i~iGDs~~~  186 (191)
                      .++     ++++||||+.||
T Consensus       516 ~~~-----~~v~~vGDg~ND  530 (645)
T 3j08_A          516 QAK-----EVVAFVGDGIND  530 (645)
T ss_dssp             TTT-----CCEEEEECSSSC
T ss_pred             hhC-----CeEEEEeCCHhH
Confidence            443     899999999998

>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}

Probab=97.78  E-value=2e-05  Score=66.07  Aligned_cols=71  Identities=7%  Similarity=0.022  Sum_probs=55.6

Q ss_pred             CCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q 029593           90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLA  166 (191)
Q Consensus        90 ~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~  166 (191)
                      ++.|++.+.++.|+++|+   ++|+.+...++.+.+.+|+...+..+.                     ++.|...++.+
T Consensus       535 ~~~~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~lgi~~~~~~~~---------------------P~~K~~~v~~l  593 (723)
T 3j09_A          535 TLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIAEVL---------------------PHQKSEEVKKL  593 (723)
T ss_dssp             CSCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEECSCC---------------------TTCHHHHHHHH
T ss_pred             CcchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCcEEEccCC---------------------HHHHHHHHHHH
Confidence            688999999999999998   899999999999999999864322111                     24456666655


Q ss_pred             HHHcCCCCCceEEecCcccc
Q 029593          167 LHVANVDPRHAVRQSSFLIF  186 (191)
Q Consensus       167 ~~~~~~~p~~~i~iGDs~~~  186 (191)
                      .+.     ++++||||+.||
T Consensus       594 ~~~-----~~v~~vGDg~ND  608 (723)
T 3j09_A          594 QAK-----EVVAFVGDGIND  608 (723)
T ss_dssp             TTT-----CCEEEEECSSTT
T ss_pred             hcC-----CeEEEEECChhh
Confidence            443     899999999998

>3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A*

Probab=97.53  E-value=8.9e-05  Score=56.89  Aligned_cols=34  Identities=18%  Similarity=-0.018  Sum_probs=27.4

Q ss_pred             CCCCCCCHHHHHHHHHHc----------------------CC-----CCCceEEecCccc-c
Q 029593          153 PVLLKPSMDAMKLALHVA----------------------NV-----DPRHAVRQSSFLI-F  186 (191)
Q Consensus       153 ~~~~kp~~~~~~~~~~~~----------------------~~-----~p~~~i~iGDs~~-~  186 (191)
                      ...|||++.+|+.+++.+                      |+     ++++++||||++. |
T Consensus       242 ~~~GKP~~~~y~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~VGD~~~~D  303 (352)
T 3kc2_A          242 YTLGKPTKLTYDFAHHVLIDWEKRLSGKIGQSVKQKLPLLGTKPSTSPFHAVFMVGDNPASD  303 (352)
T ss_dssp             EECSTTCHHHHHHHHHHHHHHHHHHHC--------------CCTTTTTSSEEEEEESCTTTH
T ss_pred             eEecCCCHHHHHHHHHHHHHHHHhhhcccccccccccccccccccCCCcceEEEEecCcHHH
Confidence            578999999999887654                      22     6799999999984 5

>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp}

Probab=97.50  E-value=7.2e-05  Score=62.75  Aligned_cols=72  Identities=8%  Similarity=-0.026  Sum_probs=54.2

Q ss_pred             CCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q 029593           90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLA  166 (191)
Q Consensus        90 ~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~  166 (191)
                      ++.|++++.++.|+++|+   ++|+.+...++.+.+.+|+...+..                         -.|.--..+
T Consensus       554 ~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~ia~~lgi~~v~a~-------------------------~~P~~K~~~  608 (736)
T 3rfu_A          554 PIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLGIKKVVAE-------------------------IMPEDKSRI  608 (736)
T ss_dssp             CBCSSHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHHTCCCEECS-------------------------CCHHHHHHH
T ss_pred             cchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCEEEEe-------------------------cCHHHHHHH
Confidence            677999999999999998   8999899999999999998642211                         112333334


Q ss_pred             HHHcCCCCCceEEecCcccc
Q 029593          167 LHVANVDPRHAVRQSSFLIF  186 (191)
Q Consensus       167 ~~~~~~~p~~~i~iGDs~~~  186 (191)
                      .+.++-..+.++||||+.||
T Consensus       609 v~~l~~~g~~V~~vGDG~ND  628 (736)
T 3rfu_A          609 VSELKDKGLIVAMAGDGVND  628 (736)
T ss_dssp             HHHHHHHSCCEEEEECSSTT
T ss_pred             HHHHHhcCCEEEEEECChHh
Confidence            44444457889999999998

>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ...

Probab=97.34  E-value=0.00028  Score=61.28  Aligned_cols=40  Identities=18%  Similarity=0.259  Sum_probs=36.1

Q ss_pred             CCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcc
Q 029593           90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADC  129 (191)
Q Consensus        90 ~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~  129 (191)
                      ++.|++.++++.|+++|+   ++|+.+...+..+.+.+|+...
T Consensus       603 ~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta~~ia~~lgi~~~  645 (995)
T 3ar4_A          603 PPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGE  645 (995)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTSSCT
T ss_pred             CCchhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCcCCC
Confidence            678999999999999998   9999999999999999999653

>3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A*

Probab=97.23  E-value=9.6e-05  Score=53.82  Aligned_cols=31  Identities=26%  Similarity=0.305  Sum_probs=24.4

Q ss_pred             CCceEEEEecCCCCCCChHHHHHHHHHHHHH
Q 029593            3 SPFNCLVFDLDDTLYPSETGIAAAVKRNIEG   33 (191)
Q Consensus         3 ~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~   33 (191)
                      |++|+|+||+||||++++..+.....+++++
T Consensus         2 M~~kli~~DlDGTLl~~~~~i~~~~~~~l~~   32 (246)
T 3f9r_A            2 MKRVLLLFDVDGTLTPPRLCQTDEMRALIKR   32 (246)
T ss_dssp             CCSEEEEECSBTTTBSTTSCCCHHHHHHHHH
T ss_pred             CCceEEEEeCcCCcCCCCCccCHHHHHHHHH
Confidence            3589999999999999887666666666655

>3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118}

Probab=97.18  E-value=0.00013  Score=51.52  Aligned_cols=81  Identities=14%  Similarity=0.019  Sum_probs=63.1

Q ss_pred             CCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCC-cccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHH
Q 029593           89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIA-DCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMK  164 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~-~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~  164 (191)
                      +...||+.++|+.+.+ ++   |.|.+...++..+++.++.. .+|+..+..+....               ++  ..+.
T Consensus        58 v~~RPgl~eFL~~l~~-~yeivI~Tas~~~ya~~vl~~LDp~~~~f~~rl~R~~c~~---------------~~--g~y~  119 (204)
T 3qle_A           58 TAKRPGADYFLGYLSQ-YYEIVLFSSNYMMYSDKIAEKLDPIHAFVSYNLFKEHCVY---------------KD--GVHI  119 (204)
T ss_dssp             EEECTTHHHHHHHHTT-TEEEEEECSSCHHHHHHHHHHTSTTCSSEEEEECGGGSEE---------------ET--TEEE
T ss_pred             EEeCCCHHHHHHHHHh-CCEEEEEcCCcHHHHHHHHHHhCCCCCeEEEEEEecceeE---------------EC--Ceee
Confidence            5789999999999984 45   99999999999999999886 47887666543221               11  1245


Q ss_pred             HHHHHcCCCCCceEEecCccccc
Q 029593          165 LALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       165 ~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      +-++.+|.++++|++|.|+++-|
T Consensus       120 KdL~~Lgrdl~~vIiIDDsp~~~  142 (204)
T 3qle_A          120 KDLSKLNRDLSKVIIIDTDPNSY  142 (204)
T ss_dssp             CCGGGSCSCGGGEEEEESCTTTT
T ss_pred             ecHHHhCCChHHEEEEECCHHHH
Confidence            66778899999999999998754

>2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A

Probab=97.13  E-value=0.00015  Score=52.57  Aligned_cols=31  Identities=19%  Similarity=0.246  Sum_probs=24.2

Q ss_pred             CCceEEEEecCCCCCCChHHHHHHHHHHHHH
Q 029593            3 SPFNCLVFDLDDTLYPSETGIAAAVKRNIEG   33 (191)
Q Consensus         3 ~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~   33 (191)
                      +++|+|+||+||||++.+..+.....+++++
T Consensus         4 ~~~kli~~DlDGTLl~~~~~i~~~~~~al~~   34 (246)
T 2amy_A            4 PGPALCLFDVDGTLTAPRQKITKEMDDFLQK   34 (246)
T ss_dssp             CCSEEEEEESBTTTBCTTSCCCHHHHHHHHH
T ss_pred             CCceEEEEECCCCcCCCCcccCHHHHHHHHH
Confidence            4689999999999999876565566665555

>2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A

Probab=97.10  E-value=0.00074  Score=49.04  Aligned_cols=32  Identities=9%  Similarity=-0.072  Sum_probs=29.0

Q ss_pred             CCCCHHHHHHHHHHcCC-CCCceEEecCccccc
Q 029593          156 LKPSMDAMKLALHVANV-DPRHAVRQSSFLIFY  187 (191)
Q Consensus       156 ~kp~~~~~~~~~~~~~~-~p~~~i~iGDs~~~~  187 (191)
                      +-.|+.+++.+++.+++ +++++++|||+.||.
T Consensus       177 g~sKg~al~~l~~~~~~~~~~~viafGD~~NDi  209 (249)
T 2zos_A          177 NSDKGKAAKILLDFYKRLGQIESYAVGDSYNDF  209 (249)
T ss_dssp             SCCHHHHHHHHHHHHHTTSCEEEEEEECSGGGH
T ss_pred             CCChHHHHHHHHHHhccCCCceEEEECCCcccH
Confidence            45678999999999998 999999999999995

>1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A*

Probab=96.96  E-value=0.00046  Score=49.99  Aligned_cols=32  Identities=6%  Similarity=-0.095  Sum_probs=29.6

Q ss_pred             CCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          156 LKPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       156 ~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      +-+|+.+++.+++.+|++++++++|||+.||.
T Consensus       160 ~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~  191 (244)
T 1s2o_A          160 RSNKGNATQYLQQHLAMEPSQTLVCGDSGNDI  191 (244)
T ss_dssp             TCSHHHHHHHHHHHTTCCGGGEEEEECSGGGH
T ss_pred             CCChHHHHHHHHHHhCCCHHHEEEECCchhhH
Confidence            46779999999999999999999999999995

>1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18

Probab=96.92  E-value=0.00032  Score=45.60  Aligned_cols=17  Identities=41%  Similarity=0.573  Sum_probs=14.7

Q ss_pred             ceEEEEecCCCCCCChH
Q 029593            5 FNCLVFDLDDTLYPSET   21 (191)
Q Consensus         5 ~k~iifD~DGTL~~~~~   21 (191)
                      +|+|+||+||||+++..
T Consensus         1 ik~i~~DlDGTL~~~~~   17 (126)
T 1xpj_A            1 MKKLIVDLDGTLTQANT   17 (126)
T ss_dssp             CCEEEECSTTTTBCCCC
T ss_pred             CCEEEEecCCCCCCCCC
Confidence            48999999999998753

>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1

Probab=96.88  E-value=0.00084  Score=57.68  Aligned_cols=39  Identities=13%  Similarity=0.233  Sum_probs=35.7

Q ss_pred             CCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCc
Q 029593           90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIAD  128 (191)
Q Consensus        90 ~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~  128 (191)
                      ++.|++.++++.|+++|+   ++|+-+...+..+.+.+|+..
T Consensus       535 p~R~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aIA~~lGI~~  576 (920)
T 1mhs_A          535 PPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGT  576 (920)
T ss_dssp             CCCHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHTSSC
T ss_pred             cccccHHHHHHHHhhcCceEEEEcCCCHHHHHHHHHHcCCCc
Confidence            688999999999999998   999999999999999999953

>3shq_A UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila melanogaster}

Probab=96.86  E-value=6.7e-05  Score=56.73  Aligned_cols=88  Identities=13%  Similarity=0.099  Sum_probs=54.7

Q ss_pred             CCChhHHHHHHhhccC-cE-EEecCChHHHHHHHhhcCCCccc--ceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q 029593           90 KPDPQLRNLLCSITQR-KI-IFTNSDRNHAITCLKRLEIADCF--DQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKL  165 (191)
Q Consensus        90 ~~~~~~~~~l~~l~~~-g~-i~t~~~~~~~~~~l~~~~l~~~f--~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~  165 (191)
                      ...|++.++|+.+.+. .+ |.|.+...++..+++.++....+  ...+..+.-..  ++        ...+..+..+.+
T Consensus       164 ~~RP~l~eFL~~l~~~yeivIfTas~~~ya~~vld~Ld~~~~~~~~~~~~r~~~~~--~~--------~~~~~~g~~~vK  233 (320)
T 3shq_A          164 LMRPYLHEFLTSAYEDYDIVIWSATSMRWIEEKMRLLGVASNDNYKVMFYLDSTAM--IS--------VHVPERGVVDVK  233 (320)
T ss_dssp             HBCTTHHHHHHHHHHHEEEEEECSSCHHHHHHHHHHTTCTTCSSCCCCEEECGGGC--EE--------EEETTTEEEEEC
T ss_pred             EeCCCHHHHHHHHHhCCEEEEEcCCcHHHHHHHHHHhCCCCCcceeEEEEEcCCcc--cc--------ccccCCCCEEEE
Confidence            5679999999999853 23 99999999999999998876543  21111111000  00        000111112333


Q ss_pred             HHHHc-----CCCCCceEEecCccccc
Q 029593          166 ALHVA-----NVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       166 ~~~~~-----~~~p~~~i~iGDs~~~~  187 (191)
                      -++.+     |-+++++++|.|++.-|
T Consensus       234 dLs~Lw~~~p~rdl~~tIiIDdsp~~~  260 (320)
T 3shq_A          234 PLGVIWALYKQYNSSNTIMFDDIRRNF  260 (320)
T ss_dssp             CHHHHHHHCTTCCGGGEEEEESCGGGG
T ss_pred             EhHHhhcccCCCChhHEEEEeCChHHh
Confidence            34444     78899999999998754

>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana}

Probab=96.80  E-value=0.00067  Score=58.11  Aligned_cols=38  Identities=11%  Similarity=0.110  Sum_probs=35.0

Q ss_pred             CCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCC
Q 029593           90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIA  127 (191)
Q Consensus        90 ~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~  127 (191)
                      ++.|++.+.++.|+++|+   ++|+.+...+..+.+.+|+.
T Consensus       488 p~R~~a~~aI~~l~~aGI~v~MiTGD~~~tA~~iA~~lGi~  528 (885)
T 3b8c_A          488 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG  528 (885)
T ss_dssp             CCCHHHHHHHHHHHHTTCCCEEEESSCHHHHTHHHHTTTCT
T ss_pred             ccchhHHHHHHHHHHcCCcEEEEcCCChHHHHHHHHHhCCc
Confidence            678999999999999998   99998899999999999985

>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A

Probab=96.80  E-value=0.0023  Score=55.86  Aligned_cols=38  Identities=16%  Similarity=0.153  Sum_probs=34.8

Q ss_pred             CCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCC
Q 029593           90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIA  127 (191)
Q Consensus        90 ~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~  127 (191)
                      ++.|++.++++.|+++|+   ++|+.+...+..+.+.+|+.
T Consensus       599 plr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lgi~  639 (1028)
T 2zxe_A          599 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGII  639 (1028)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTSS
T ss_pred             CCChhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCCC
Confidence            678999999999999998   89998899999999999886

>2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A*

Probab=96.74  E-value=0.00045  Score=50.61  Aligned_cols=29  Identities=0%  Similarity=-0.433  Sum_probs=25.0

Q ss_pred             CCCCHHHHHHHHHHcCCCCCceEEecC----ccccc
Q 029593          156 LKPSMDAMKLALHVANVDPRHAVRQSS----FLIFY  187 (191)
Q Consensus       156 ~kp~~~~~~~~~~~~~~~p~~~i~iGD----s~~~~  187 (191)
                      +-.|..+++.+   +|++++++++|||    +.||.
T Consensus       195 ~vsKg~al~~l---~gi~~~~viafGDs~~~~~NDi  227 (262)
T 2fue_A          195 GWDKRYCLDSL---DQDSFDTIHFFGNETSPGGNDF  227 (262)
T ss_dssp             TCSTTHHHHHH---TTSCCSEEEEEESCCSTTSTTH
T ss_pred             CCCHHHHHHHH---HCCCHHHEEEECCCCCCCCCCH
Confidence            34567888888   8999999999999    99984

>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25

Probab=96.66  E-value=0.00062  Score=45.19  Aligned_cols=16  Identities=19%  Similarity=0.281  Sum_probs=14.2

Q ss_pred             ceEEEEecCCCCCCCh
Q 029593            5 FNCLVFDLDDTLYPSE   20 (191)
Q Consensus         5 ~k~iifD~DGTL~~~~   20 (191)
                      +|+|+||+||||++..
T Consensus         3 ~k~i~~DlDGTL~~~~   18 (142)
T 2obb_A            3 AMTIAVDFDGTIVEHR   18 (142)
T ss_dssp             CCEEEECCBTTTBCSC
T ss_pred             CeEEEEECcCCCCCCC
Confidence            6899999999999853

>2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A

Probab=96.55  E-value=0.00093  Score=48.51  Aligned_cols=27  Identities=26%  Similarity=0.297  Sum_probs=18.1

Q ss_pred             ceEEEEecCCCCCCChHHHHHHHHHHHHH
Q 029593            5 FNCLVFDLDDTLYPSETGIAAAVKRNIEG   33 (191)
Q Consensus         5 ~k~iifD~DGTL~~~~~~~~~~~~~~~~~   33 (191)
                      +|+|+||+||||+ .+..+. ...+++.+
T Consensus         2 ikli~~DlDGTLl-~~~~~~-~~~~~l~~   28 (249)
T 2zos_A            2 IRLIFLDIDKTLI-PGYEPD-PAKPIIEE   28 (249)
T ss_dssp             EEEEEECCSTTTC-TTSCSG-GGHHHHHH
T ss_pred             ccEEEEeCCCCcc-CCCCcH-HHHHHHHH
Confidence            6999999999999 543332 24444433

>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A

Probab=96.37  E-value=0.0068  Score=52.94  Aligned_cols=38  Identities=13%  Similarity=0.133  Sum_probs=34.5

Q ss_pred             CCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCC
Q 029593           90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIA  127 (191)
Q Consensus        90 ~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~  127 (191)
                      ++.|++.++++.|+++|+   ++|+.+...+..+.+.+|+.
T Consensus       604 p~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~lgi~  644 (1034)
T 3ixz_A          604 PPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVGII  644 (1034)
T ss_pred             CCchhHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence            678999999999999998   89988888999999999884

>1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A*

Probab=96.07  E-value=0.0041  Score=44.94  Aligned_cols=25  Identities=20%  Similarity=0.325  Sum_probs=18.0

Q ss_pred             eEEEEecCCCCCCChHHHHHHHHHHH
Q 029593            6 NCLVFDLDDTLYPSETGIAAAVKRNI   31 (191)
Q Consensus         6 k~iifD~DGTL~~~~~~~~~~~~~~~   31 (191)
                      .+|+||+||||++.+..+ ....+++
T Consensus         4 ~li~~DlDGTLl~~~~~~-~~~~~~l   28 (244)
T 1s2o_A            4 LLLISDLDNTWVGDQQAL-EHLQEYL   28 (244)
T ss_dssp             EEEEECTBTTTBSCHHHH-HHHHHHH
T ss_pred             eEEEEeCCCCCcCCHHHH-HHHHHHH
Confidence            399999999999987543 3444443

>1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15

Probab=95.91  E-value=0.0025  Score=45.96  Aligned_cols=26  Identities=8%  Similarity=-0.210  Sum_probs=23.4

Q ss_pred             CCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          157 KPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       157 kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      -.|..+++.+++.+|     +++|||+.||.
T Consensus       159 ~~Kg~al~~l~~~~g-----via~GD~~ND~  184 (239)
T 1u02_A          159 VNKGSAIRSVRGERP-----AIIAGDDATDE  184 (239)
T ss_dssp             CCHHHHHHHHHTTSC-----EEEEESSHHHH
T ss_pred             CCHHHHHHHHHhhCC-----eEEEeCCCccH
Confidence            457899999999998     99999999984

>3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A*

Probab=95.51  E-value=0.0051  Score=47.11  Aligned_cols=22  Identities=27%  Similarity=0.462  Sum_probs=18.4

Q ss_pred             CceEEEEecCCCCCCChHHHHH
Q 029593            4 PFNCLVFDLDDTLYPSETGIAA   25 (191)
Q Consensus         4 ~~k~iifD~DGTL~~~~~~~~~   25 (191)
                      +.++++||+||||++....+..
T Consensus        12 ~~~~~l~D~DGvl~~g~~~~p~   33 (352)
T 3kc2_A           12 KKIAFAFDIDGVLFRGKKPIAG   33 (352)
T ss_dssp             CCEEEEECCBTTTEETTEECTT
T ss_pred             cCCEEEEECCCeeEcCCeeCcC
Confidence            5899999999999998765543

>3ef1_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, BEF3, acylphosphate analog, cobalt, magnesium; HET: BFD; 2.15A {Schizosaccharomyces pombe}

Probab=92.69  E-value=0.099  Score=41.12  Aligned_cols=79  Identities=19%  Similarity=0.216  Sum_probs=57.1

Q ss_pred             CCCChhHHHHHHhhccC-cE-EEecCChHHHHHHHhhcCCCc-ccce-eeecccCCCCCCCCCCCCCCCCCCCCCHHHHH
Q 029593           89 IKPDPQLRNLLCSITQR-KI-IFTNSDRNHAITCLKRLEIAD-CFDQ-IICFETMNPNLSKATRPDEFPVLLKPSMDAMK  164 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~-g~-i~t~~~~~~~~~~l~~~~l~~-~f~~-i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~  164 (191)
                      +...|++.++|+.+.+. .+ |.|.+...++..+++.++... +|.. +++.+.-+.            ..-|.      
T Consensus        82 V~~RPgl~eFL~~ls~~yEivIfTas~~~YA~~Vl~~LDp~~~~f~~Rl~sRd~cg~------------~~~Kd------  143 (442)
T 3ef1_A           82 IKFRPGLAQFLQKISELYELHIYTMGTKAYAKEVAKIIDPTGKLFQDRVLSRDDSGS------------LAQKS------  143 (442)
T ss_dssp             EEECTTHHHHHHHHTTTEEEEEECSSCHHHHHHHHHHHCTTSTTTTTCEECTTTSSC------------SSCCC------
T ss_pred             EEeCCCHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhccCCccccceEEEecCCCC------------ceeee------
Confidence            67889999999999854 22 999999999999999998876 6766 454443211            00131      


Q ss_pred             HHHHH-cCCCCCceEEecCccccc
Q 029593          165 LALHV-ANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       165 ~~~~~-~~~~p~~~i~iGDs~~~~  187 (191)
                        ++. +|.+.+++++|.|++.-|
T Consensus       144 --L~~ll~rdl~~vvIIDd~p~~~  165 (442)
T 3ef1_A          144 --LRRLFPCDTSMVVVIDDRGDVW  165 (442)
T ss_dssp             --GGGTCSSCCTTEEEEESCSGGG
T ss_pred             --hHHhcCCCcceEEEEECCHHHh
Confidence              332 488899999999998543

>2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A*

Probab=92.68  E-value=0.075  Score=38.60  Aligned_cols=30  Identities=27%  Similarity=0.340  Sum_probs=22.8

Q ss_pred             CceEEEEecCCCCCCChHHHHHHHHHHHHH
Q 029593            4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEG   33 (191)
Q Consensus         4 ~~k~iifD~DGTL~~~~~~~~~~~~~~~~~   33 (191)
                      ++|+|+||+||||++.+..+.....+++++
T Consensus        12 ~~kli~~DlDGTLl~~~~~is~~~~~al~~   41 (262)
T 2fue_A           12 ERVLCLFDVDGTLTPARQKIDPEVAAFLQK   41 (262)
T ss_dssp             -CEEEEEESBTTTBSTTSCCCHHHHHHHHH
T ss_pred             CeEEEEEeCccCCCCCCCcCCHHHHHHHHH
Confidence            589999999999999876565556665555

>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13

Probab=91.62  E-value=0.17  Score=39.17  Aligned_cols=22  Identities=18%  Similarity=0.431  Sum_probs=18.3

Q ss_pred             ceEEEEecCCCCCCChHHHHHH
Q 029593            5 FNCLVFDLDDTLYPSETGIAAA   26 (191)
Q Consensus         5 ~k~iifD~DGTL~~~~~~~~~~   26 (191)
                      +|.|+||+|||++..+..+.-+
T Consensus         1 ~~~~~fdvdgv~~~~~~~~d~~   22 (384)
T 1qyi_A            1 MKKILFDVDGVFLSEERCFDVS   22 (384)
T ss_dssp             CCEEEECSBTTTBCSHHHHHHH
T ss_pred             CceEEEecCceeechhhhccHH
Confidence            4899999999999998766544

>1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15

Probab=90.62  E-value=0.1  Score=37.37  Aligned_cols=15  Identities=33%  Similarity=0.592  Sum_probs=12.9

Q ss_pred             ceEEEEecCCCCCCC
Q 029593            5 FNCLVFDLDDTLYPS   19 (191)
Q Consensus         5 ~k~iifD~DGTL~~~   19 (191)
                      +++|+||+||||++.
T Consensus         1 ikli~~DlDGTLl~~   15 (239)
T 1u02_A            1 MSLIFLDYDGTLVPI   15 (239)
T ss_dssp             -CEEEEECBTTTBCC
T ss_pred             CeEEEEecCCCCcCC
Confidence            579999999999984

>3geb_A EYES absent homolog 2; hydrolase, activator, alternative splicing, cytoplasm, developmental protein, magnesium, nucleus, polymorphism; 2.40A {Homo sapiens} PDB: 3hb0_A 3hb1_A

Probab=90.07  E-value=1.2  Score=32.20  Aligned_cols=58  Identities=9%  Similarity=0.025  Sum_probs=42.2

Q ss_pred             EEecCChHHHHHHHhhcCCCcccc--eeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHcCCCCCceEEecCcc
Q 029593          108 IFTNSDRNHAITCLKRLEIADCFD--QIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHAVRQSSFL  184 (191)
Q Consensus       108 i~t~~~~~~~~~~l~~~~l~~~f~--~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~  184 (191)
                      ++|++.---.-.++=.+++..+|.  .|+++...+                  |...|+++.+++| +...-++|||+.
T Consensus       181 LVTs~qLVPaLaK~LLygL~~~fpieNIYSa~kiG------------------KesCFerI~~RFG-~k~~yvvIGDG~  240 (274)
T 3geb_A          181 LVTTTQLIPALAKVLLYGLGSVFPIENIYSATKTG------------------KESCFERIMQRFG-RKAVYVVIGDGV  240 (274)
T ss_dssp             EEESSCHHHHHHHHHHTTCTTTSCGGGEEETTTTC------------------HHHHHHHHHHHHC-TTSEEEEEESSH
T ss_pred             EEecCchHHHHHHHHHhhcccceecccccchhhcC------------------HHHHHHHHHHHhC-CCceEEEECCCH
Confidence            888877655555555567777664  477766543                  3699999999997 557888899985

>2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A

Probab=89.99  E-value=0.064  Score=38.48  Aligned_cols=28  Identities=4%  Similarity=-0.353  Sum_probs=22.2

Q ss_pred             CCCHHHHHHHHHHcCCCCCceEEecC----ccccc
Q 029593          157 KPSMDAMKLALHVANVDPRHAVRQSS----FLIFY  187 (191)
Q Consensus       157 kp~~~~~~~~~~~~~~~p~~~i~iGD----s~~~~  187 (191)
                      -.|..+++.+   +|++++++++|||    +.||.
T Consensus       187 ~~Kg~al~~l---~~i~~~~viafGD~~~~~~ND~  218 (246)
T 2amy_A          187 WDKRYCLRHV---ENDGYKTIYFFGDKTMPGGNDH  218 (246)
T ss_dssp             CSGGGGGGGT---TTSCCSEEEEEECSCC---CCC
T ss_pred             CchHHHHHHH---hCCCHHHEEEECCCCCCCCCcH
Confidence            4457788888   8999999999999    99995

>2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens}

Probab=89.72  E-value=0.077  Score=36.98  Aligned_cols=17  Identities=47%  Similarity=0.714  Sum_probs=15.0

Q ss_pred             CceEEEEecCCCCCCCh
Q 029593            4 PFNCLVFDLDDTLYPSE   20 (191)
Q Consensus         4 ~~k~iifD~DGTL~~~~   20 (191)
                      +.+++++|+||||+.+.
T Consensus        27 ~k~~LVLDLD~TLvhs~   43 (195)
T 2hhl_A           27 GKKCVVIDLDETLVHSS   43 (195)
T ss_dssp             TCCEEEECCBTTTEEEE
T ss_pred             CCeEEEEccccceEccc
Confidence            46899999999999874

>2jc9_A Cytosolic purine 5'-nucleotidase; cytosolic 5-prime nucleotidase II, GMP-IMP specific nucleotidase, CN-II, NT5C2, hydrolase, polymorphism; HET: ADN; 1.5A {Homo sapiens} PDB: 2j2c_A* 2xje_A* 2xjf_A* 2jcm_A* 2xcw_A* 2xcv_A* 2xcx_A 2xjb_A* 2xjc_A* 2xjd_A*

Probab=88.54  E-value=0.47  Score=38.36  Aligned_cols=39  Identities=21%  Similarity=0.290  Sum_probs=25.2

Q ss_pred             CceEEEEecCCCCCCChH-HHHHHHHHHHHHHHHHHhCCCH
Q 029593            4 PFNCLVFDLDDTLYPSET-GIAAAVKRNIEGFLIEKCGFSE   43 (191)
Q Consensus         4 ~~k~iifD~DGTL~~~~~-~~~~~~~~~~~~~~~~~~g~~~   43 (191)
                      ++++|.||||+||+.... .+..-..+...+++.+ .|.|.
T Consensus        64 ~I~~iGFDmDyTLa~Y~~~~~e~L~y~~~~~~LV~-~gYP~  103 (555)
T 2jc9_A           64 KIKCFGFDMDYTLAVYKSPEYESLGFELTVERLVS-IGYPQ  103 (555)
T ss_dssp             GCCEEEECTBTTTBCBCTTHHHHHHHHHHHHHHHH-TTCCG
T ss_pred             CCCEEEECCcccccccCcHHHHHHHHHHHHHHHHH-cCCCh
Confidence            699999999999999864 3332233333333443 67764

>2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A

Probab=86.82  E-value=0.15  Score=34.93  Aligned_cols=17  Identities=41%  Similarity=0.612  Sum_probs=14.8

Q ss_pred             CceEEEEecCCCCCCCh
Q 029593            4 PFNCLVFDLDDTLYPSE   20 (191)
Q Consensus         4 ~~k~iifD~DGTL~~~~   20 (191)
                      +.+++++|+|+||+.+.
T Consensus        14 ~k~~LVLDLD~TLvhs~   30 (181)
T 2ght_A           14 DKICVVINLDETLVHSS   30 (181)
T ss_dssp             TSCEEEECCBTTTEEEE
T ss_pred             CCeEEEECCCCCeECCc
Confidence            46899999999999874

>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0

Probab=85.71  E-value=0.93  Score=32.54  Aligned_cols=45  Identities=16%  Similarity=0.189  Sum_probs=34.4

Q ss_pred             CChhHHHHHHhhccCcE---EEec---CChHHHHHHHhhcCCCcccceeee
Q 029593           91 PDPQLRNLLCSITQRKI---IFTN---SDRNHAITCLKRLEIADCFDQIIC  135 (191)
Q Consensus        91 ~~~~~~~~l~~l~~~g~---i~t~---~~~~~~~~~l~~~~l~~~f~~i~~  135 (191)
                      +.|++++++.+++++|+   ++||   .+.......++.+|+....+.+++
T Consensus        25 ~~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~~~~~~ii~   75 (268)
T 3qgm_A           25 PIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRSFGLEVGEDEILV   75 (268)
T ss_dssp             ECHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHHTTCCCCGGGEEE
T ss_pred             eCcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHHHHHHCCCCCCHHHeeC
Confidence            45789999999999997   8888   456667778888888655555554

>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}

Probab=82.22  E-value=3.3  Score=29.66  Aligned_cols=43  Identities=26%  Similarity=0.323  Sum_probs=29.0

Q ss_pred             hhHHHHHHhhccCcE---EEecCChHH---HHHHHhhcCCCcccceeee
Q 029593           93 PQLRNLLCSITQRKI---IFTNSDRNH---AITCLKRLEIADCFDQIIC  135 (191)
Q Consensus        93 ~~~~~~l~~l~~~g~---i~t~~~~~~---~~~~l~~~~l~~~f~~i~~  135 (191)
                      |++.+++..|+++|+   ++||.+...   ....++.+|+....+.+++
T Consensus        20 ~~~~~~l~~l~~~g~~~~~~T~r~~~~~~~~~~~l~~lg~~~~~~~i~~   68 (263)
T 1zjj_A           20 PGVRELIEFLKERGIPFAFLTNNSTKTPEMYREKLLKMGIDVSSSIIIT   68 (263)
T ss_dssp             TTHHHHHHHHHHHTCCEEEEESCCSSCHHHHHHHHHTTTCCCCGGGEEE
T ss_pred             ccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCCChhhEEe
Confidence            678899999998886   888876533   3444455677644455554

>3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118}

Probab=82.14  E-value=0.38  Score=33.74  Aligned_cols=17  Identities=41%  Similarity=0.335  Sum_probs=14.9

Q ss_pred             CceEEEEecCCCCCCCh
Q 029593            4 PFNCLVFDLDDTLYPSE   20 (191)
Q Consensus         4 ~~k~iifD~DGTL~~~~   20 (191)
                      +.+++++|+|+||+.+.
T Consensus        33 ~~~tLVLDLDeTLvh~~   49 (204)
T 3qle_A           33 RPLTLVITLEDFLVHSE   49 (204)
T ss_dssp             CSEEEEEECBTTTEEEE
T ss_pred             CCeEEEEeccccEEeee
Confidence            46799999999999874

>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0

Probab=80.01  E-value=2.3  Score=30.37  Aligned_cols=42  Identities=14%  Similarity=0.264  Sum_probs=28.7

Q ss_pred             hhHHHHHHhhccCcE---EEec---CChHHHHHHHhhcCCCcccceee
Q 029593           93 PQLRNLLCSITQRKI---IFTN---SDRNHAITCLKRLEIADCFDQII  134 (191)
Q Consensus        93 ~~~~~~l~~l~~~g~---i~t~---~~~~~~~~~l~~~~l~~~f~~i~  134 (191)
                      |++++++.+++++|+   ++||   .+...+...++.+|+....+.++
T Consensus        25 ~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l~~lg~~~~~~~ii   72 (266)
T 3pdw_A           25 EEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSFDIPATEEQVF   72 (266)
T ss_dssp             HHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHHTTCCCCGGGEE
T ss_pred             ccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCHHHcc
Confidence            456788888888887   7777   44556667777777754444443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	191
d2hsza1	224	c.108.1.6 (A:1-224) Phosphoglycolate phosphatase G	0.002

>d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} Length = 224

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase Gph
species: Haemophilus somnus [TaxId: 731]

 Score = 36.0 bits (81), Expect = 0.002
 Identities = 20/146 (13%), Positives = 45/146 (30%), Gaps = 9/146 (6%)

Query: 3   SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLA 62
           + F  + FDLD TL  S   +A ++   ++   + +   +             +  +   
Sbjct: 2   TQFKLIGFDLDGTLVNSLPDLALSINSALKDVNLPQASENLVMTWIGNGADVLSQRAVDW 61

Query: 63  GLRALGYDIGADDYHGFVHGRLPYDLIKPDPQLR---------NLLCSITQRKIIFTNSD 113
             +    ++  D++  F      Y         R           L +      + TN  
Sbjct: 62  ACKQAEKELTEDEFKYFKRQFGFYYGENLCNISRLYPNVKETLEALKAQGYILAVVTNKP 121

Query: 114 RNHAITCLKRLEIADCFDQIICFETM 139
             H    L    I   F +++  +++
Sbjct: 122 TKHVQPILTAFGIDHLFSEMLGGQSL 147

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	191
d2hdoa1	207	Phosphoglycolate phosphatase {Lactobacillus planta	99.94
d1te2a_	218	Phosphatase YniC {Escherichia coli [TaxId: 562]}	99.93
d2hsza1	224	Phosphoglycolate phosphatase Gph {Haemophilus somn	99.92
d2go7a1	204	Hypothetical protein SP2064 {Streptococcus pneumon	99.92
d2fi1a1	187	Putative hydrolase SP0805 {Streptococcus pneumonia	99.91
d2ah5a1	210	predicted phosphatase SP0104 {Streptococcus pneumo	99.91
d2gfha1	247	N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m	99.9
d1o08a_	221	beta-Phosphoglucomutase {Lactococcus lactis [TaxId	99.9
d2fdra1	222	Hypothetical protein Atu0790 {Agrobacterium tumefa	99.89
d1swva_	257	Phosphonoacetaldehyde hydrolase {Bacillus cereus [	99.88
d1qq5a_	245	L-2-Haloacid dehalogenase, HAD {Xanthobacter autot	99.87
d1x42a1	230	Hypothetical protein PH0459 {Archaeon Pyrococcus h	99.87
d2hcfa1	228	Hypothetical protein CT1708 {Chlorobium tepidum [T	99.87
d1zrna_	220	L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s	99.87
d1zs9a1	253	E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]}	99.82
d1u7pa_	164	Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu	99.82
d1cr6a1	222	Epoxide hydrolase, N-terminal domain {Mouse (Mus m	99.81
d1zd3a1	225	Epoxide hydrolase, N-terminal domain {Human (Homo	99.8
d2b0ca1	197	Putative phosphatase YihX {Escherichia coli [TaxId	99.76
d2g80a1	225	Protein UTR4 {Baker's yeast (Saccharomyces cerevis	99.74
d2feaa1	226	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	99.74
d1nnla_	217	Phosphoserine phosphatase {Human (Homo sapiens) [T	99.67
d1j97a_	210	Phosphoserine phosphatase {Archaeon Methanococcus	99.64
d2fpwa1	161	Histidine biosynthesis bifunctional protein HisB,	99.63
d2o2xa1	209	Hypothetical protein Mll2559 {Mesorhizobium loti [	99.58
d2gmwa1	182	D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc	99.5
d2c4na1	250	NagD {Escherichia coli [TaxId: 562]}	99.43
d1wvia_	253	Putative phosphatase SMU.1415c {Streptococcus muta	99.4
d1rkua_	206	Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta	99.38
d1yv9a1	253	Putative hydrolase EF1188 {Enterococcus faecalis [	99.34
d1vjra_	261	Hypothetical protein TM1742 {Thermotoga maritima [	99.2
d1l6ra_	225	Phosphoglycolate phosphatase, PGPase {Archaeon The	99.16
d1wr8a_	230	Phosphoglycolate phosphatase, PGPase {Pyrococcus h	99.16
d1ltqa1	149	Polynucleotide kinase, phosphatase domain {Bacteri	99.15
d1qyia_	380	Hypothetical protein MW1667 (SA1546) {Staphylococc	99.14
d1rkqa_	271	Hypothetical protein YidA {Escherichia coli [TaxId	98.96
d2bdua1	291	Cytosolic 5'-nucleotidase III {Mouse (Mus musculus	98.95
d1nrwa_	285	Hypothetical protein YwpJ {Bacillus subtilis [TaxI	98.95
d1nf2a_	267	Hypothetical protein TM0651 {Thermotoga maritima [	98.83
d1rlma_	269	Sugar phosphatase SupH (YbiV) {Escherichia coli [T	98.75
d1yj5a1	195	5' polynucleotide kinase-3' phosphatase, middle do	98.68
d2b30a1	283	PFL1270w orthologue {Plasmodium vivax [TaxId: 5855	98.66
d2rbka1	260	Sugar-phosphate phosphatase BT4131 {Bacteroides th	98.56
d1wzca1	243	Putative mannosyl-3-phosphoglycerate phosphatase M	98.48
d1xvia_	232	Putative mannosyl-3-phosphoglycerate phosphatase M	98.45
d1s2oa1	244	Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc	98.45
d2b82a1	209	Class B acid phosphatase, AphA {Escherichia coli [	98.31
d2bdea1	458	Cytosolic IMP-GMP specific 5'-nucleotidase {Legion	98.07
d2b8ea1	135	Cation-transporting ATPase {Archaeon Archaeoglobus	98.03
d1k1ea_	177	Probable phosphatase YrbI {Haemophilus influenzae,	97.97
d1q92a_	195	5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo	97.84
d1xpja_	124	Hypothetical protein VC0232 {Vibrio cholerae [TaxI	97.59
d1wpga2	168	Calcium ATPase, catalytic domain P {Rabbit (Orycto	97.58
d2amya1	243	Phosphomannomutase 2 {Human (Homo sapiens) [TaxId:	97.39
d1ta0a_	181	Carboxy-terminal domain RNA polymerase II polypept	97.35
d2fuea1	244	Phosphomannomutase 1 {Human (Homo sapiens) [TaxId:	96.69
d1y8aa1	308	Hypothetical protein AF1437 {Archaeon Archaeoglobu	96.59
d2obba1	122	Hypothetical protein BT0820 {Bacteroides thetaiota	96.22
d1u02a_	229	Trehalose-6-phosphate phosphatase related protein	95.68
d1k1ea_	177	Probable phosphatase YrbI {Haemophilus influenzae,	94.24
d1qyia_	380	Hypothetical protein MW1667 (SA1546) {Staphylococc	92.77
d1u02a_	229	Trehalose-6-phosphate phosphatase related protein	86.69
d2fuea1	244	Phosphomannomutase 1 {Human (Homo sapiens) [TaxId:	83.69

>d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase
species: Lactobacillus plantarum [TaxId: 1590]

Probab=99.94  E-value=7.6e-27  Score=165.87  Aligned_cols=161  Identities=19%  Similarity=0.256  Sum_probs=119.1

Q ss_pred             CCceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhccc-HHHHHHcCCCC-Cccchhhhh
Q 029593            3 SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGST-LAGLRALGYDI-GADDYHGFV   80 (191)
Q Consensus         3 ~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~   80 (191)
                      |++|+|+||+||||+|+.+.+..++..     +++++|.+......     ...++.. ...+...+... ..+.+...+
T Consensus         1 M~~k~viFD~DGTL~ds~~~~~~a~~~-----~~~~~g~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   70 (207)
T d2hdoa1           1 MTYQALMFDIDGTLTNSQPAYTTVMRE-----VLATYGKPFSPAQA-----QKTFPMAAEQAMTELGIAASEFDHFQAQY   70 (207)
T ss_dssp             CCCSEEEECSBTTTEECHHHHHHHHHH-----HHHTTTCCCCHHHH-----HHHTTSCHHHHHHHTTCCGGGHHHHHHHH
T ss_pred             CCCcEEEEeCCCCcCcCHHHHHHHHHH-----HHHHcCCCCCHHHH-----HHHhcchhhhhhhccccchhhHHHHHHHh
Confidence            358999999999999999888888877     45667776443332     2222222 22333322211 112222222


Q ss_pred             hcCCC--CCCCCCChhHHHHHHhhccCcE--EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCC
Q 029593           81 HGRLP--YDLIKPDPQLRNLLCSITQRKI--IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLL  156 (191)
Q Consensus        81 ~~~~~--~~~~~~~~~~~~~l~~l~~~g~--i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~  156 (191)
                      .....  ...+.++||+.++|+.|++++.  ++||+....++..++++++..+|+.++++++.+.              +
T Consensus        71 ~~~~~~~~~~~~~~~g~~~~L~~l~~~~~~~ivT~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~--------------~  136 (207)
T d2hdoa1          71 EDVMASHYDQIELYPGITSLFEQLPSELRLGIVTSQRRNELESGMRSYPFMMRMAVTISADDTPK--------------R  136 (207)
T ss_dssp             HHHHTTCGGGCEECTTHHHHHHHSCTTSEEEEECSSCHHHHHHHHTTSGGGGGEEEEECGGGSSC--------------C
T ss_pred             hhhhcccccccccccchhhhhhhhccccccccccccccccccccccccccccccccccccccccc--------------c
Confidence            21111  2346789999999999987654  9999999999999999999999999999998876              5


Q ss_pred             CCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          157 KPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       157 kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      ||+|.+++.+++++|++|++|++||||.+|.
T Consensus       137 KP~p~~~~~~~~~~~~~~~~~l~VgDs~~Di  167 (207)
T d2hdoa1         137 KPDPLPLLTALEKVNVAPQNALFIGDSVSDE  167 (207)
T ss_dssp             TTSSHHHHHHHHHTTCCGGGEEEEESSHHHH
T ss_pred             hhhhhhhcccccceeeeccceeEecCCHHHH
Confidence            9999999999999999999999999998874

>d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphatase YniC
species: Escherichia coli [TaxId: 562]

Probab=99.93  E-value=1.3e-26  Score=165.70  Aligned_cols=161  Identities=15%  Similarity=0.125  Sum_probs=114.6

Q ss_pred             CCceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccHH-----HHHHcCC-CCCccch
Q 029593            3 SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLA-----GLRALGY-DIGADDY   76 (191)
Q Consensus         3 ~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~-~~~~~~~   76 (191)
                      +++++++||+||||+|+.+.+..++.+     +.++.|++......+    ....+....     ....... ....+.+
T Consensus         1 ~~i~a~iFD~DGTL~dt~~~~~~a~~~-----~~~~~g~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   71 (218)
T d1te2a_           1 RQILAAIFDMDGLLIDSEPLWDRAELD-----VMASLGVDISRRNEL----PDTLGLRIDMVVDLWYARQPWNGPSRQEV   71 (218)
T ss_dssp             CCCCEEEECCBTTTBCCHHHHHHHHHH-----HHHHTTCCGGGGGGS----CCCTTCCHHHHHHHHHHHSCCSSSCHHHH
T ss_pred             CcceEEEECCCCcccCCHHHHHHHHHH-----HHHHcCCCCCHHHHH----HHHhCCCccchhhhhhhcccccchhHHHH
Confidence            368999999999999998877777776     446667764332211    111111111     0011111 1111111


Q ss_pred             hhh----hhcCCCCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCC
Q 029593           77 HGF----VHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRP  149 (191)
Q Consensus        77 ~~~----~~~~~~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~  149 (191)
                      ...    ....+ .....++||+.+++..|+++|+   |+||++...+...++.+|+..+|+.++++++.+.        
T Consensus        72 ~~~~~~~~~~~~-~~~~~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~~~F~~i~~~~~~~~--------  142 (218)
T d1te2a_          72 VERVIARAISLV-EETRPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALASAEKLPY--------  142 (218)
T ss_dssp             HHHHHHHHHHHH-HHHCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEECTTSSC--------
T ss_pred             HHHHHHHHHHhh-hccccccchHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccc--------
Confidence            111    11100 1124678999999999999987   9999999999999999999999999999998876        


Q ss_pred             CCCCCCCCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          150 DEFPVLLKPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       150 ~~~~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                            +||+|++|+.+++++|++|++|++|||+.+|.
T Consensus       143 ------~Kp~~~~~~~~~~~l~~~~~~~l~igD~~~di  174 (218)
T d1te2a_         143 ------SKPHPQVYLDCAAKLGVDPLTCVALEDSVNGM  174 (218)
T ss_dssp             ------CTTSTHHHHHHHHHHTSCGGGEEEEESSHHHH
T ss_pred             ------chhhHHHHHHHHHHcCCCchhcEEEeeCHHHH
Confidence                  59999999999999999999999999999874

>d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase Gph
species: Haemophilus somnus [TaxId: 731]

Probab=99.92  E-value=3.2e-25  Score=158.70  Aligned_cols=163  Identities=15%  Similarity=0.237  Sum_probs=116.7

Q ss_pred             CCCCceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccHH---------HHHHcCCCC
Q 029593            1 MDSPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLA---------GLRALGYDI   71 (191)
Q Consensus         1 M~~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~   71 (191)
                      |+ ++|+|+||+||||+|+.+.+..++.+     .++++|.+........    ...+....         .........
T Consensus         1 M~-~~k~iiFD~DGTL~Ds~~~~~~a~~~-----~~~~~g~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~   70 (224)
T d2hsza1           1 MT-QFKLIGFDLDGTLVNSLPDLALSINS-----ALKDVNLPQASENLVM----TWIGNGADVLSQRAVDWACKQAEKEL   70 (224)
T ss_dssp             CS-SCSEEEECSBTTTEECHHHHHHHHHH-----HHHHTTCCCCCHHHHH----HHCSSCHHHHHHHHHHHHHHHHTCCC
T ss_pred             CC-CCCEEEEeCCCCcccCHHHHHHHHHH-----HHHHCCCCCCcHHHHH----HHhhhhhhhhhhhhhhhhhhhhhhhh
Confidence            44 69999999999999999888888877     4456665433222211    11111110         001111111


Q ss_pred             Cccchhh------hhhcCCCCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCC
Q 029593           72 GADDYHG------FVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPN  142 (191)
Q Consensus        72 ~~~~~~~------~~~~~~~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~  142 (191)
                      ....+..      ............++|++.+++..|+++|+   ++||++...++.+++.+|+..+|+.+++++..+. 
T Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~-  149 (224)
T d2hsza1          71 TEDEFKYFKRQFGFYYGENLCNISRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSEMLGGQSLPE-  149 (224)
T ss_dssp             CHHHHHHHHHHHHHHHHHHTTSSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTTTSSS-
T ss_pred             hHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhcCchhhcccccccccccc-
Confidence            1111111      01111113346889999999999999987   9999999999999999999999999999998887 


Q ss_pred             CCCCCCCCCCCCCCCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          143 LSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       143 ~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                                   .||+|.++..+++.++++|++|++|||+.+|.
T Consensus       150 -------------~kp~p~~~~~~~~~~~~~~~~~~~igD~~~Di  181 (224)
T d2hsza1         150 -------------IKPHPAPFYYLCGKFGLYPKQILFVGDSQNDI  181 (224)
T ss_dssp             -------------CTTSSHHHHHHHHHHTCCGGGEEEEESSHHHH
T ss_pred             -------------ccccchhhHHHHHHhhhhhhccchhcCcHHHH
Confidence                         49999999999999999999999999999874

>d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein SP2064
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.92  E-value=1e-25  Score=159.63  Aligned_cols=159  Identities=18%  Similarity=0.215  Sum_probs=111.2

Q ss_pred             eEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccHHHHHHc--CCCCCccchhhhhhcC
Q 029593            6 NCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLRAL--GYDIGADDYHGFVHGR   83 (191)
Q Consensus         6 k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~   83 (191)
                      ++++||+||||+|+.+.+..++.+     ..+++|.+........  .....+. ...+..+  ......+.+.......
T Consensus         2 ~a~iFD~DGTL~ds~~~~~~a~~~-----~~~~~g~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~   73 (204)
T d2go7a1           2 TAFIWDLDGTLLDSYEAILSGIEE-----TFAQFSIPYDKEKVRE--FIFKYSV-QDLLVRVAEDRNLDVEVLNQVRAQS   73 (204)
T ss_dssp             CEEEECTBTTTEECHHHHHHHHHH-----HHHHHTCCCCHHHHHH--HHHHSCH-HHHHHHHHHHHTCCHHHHHHHHHHH
T ss_pred             EEEEEcCCCcCccCHHHHHHHHHH-----HHHHcCCCCCHHHHHH--hhccccc-ccccccccchhhhhHHHHHHHHHHH
Confidence            689999999999999888888876     4455676543322111  1111111 1111111  1112222222221111


Q ss_pred             C--CCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCC
Q 029593           84 L--PYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKP  158 (191)
Q Consensus        84 ~--~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp  158 (191)
                      .  ......++||+.++|+.|+++|+   |+||+.. .+..+++++|+..+|+.++++++.+.              +||
T Consensus        74 ~~~~~~~~~~~pgv~~~L~~L~~~g~~~~v~Sn~~~-~~~~~l~~~gl~~~f~~i~~s~~~~~--------------~Kp  138 (204)
T d2go7a1          74 LAEKNAQVVLMPGAREVLAWADESGIQQFIYTHKGN-NAFTILKDLGVESYFTEILTSQSGFV--------------RKP  138 (204)
T ss_dssp             HTTCGGGCEECTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHHTCGGGEEEEECGGGCCC--------------CTT
T ss_pred             HHhhcccCcccchHHhhhhcccccccchhhhcccch-hhhhhhhhcccccccccccccccccc--------------cch
Confidence            1  12346788999999999999987   8998776 56678999999999999999988776              599


Q ss_pred             CHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          159 SMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       159 ~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      +|++|+.++++++++|++|++|||+.+|.
T Consensus       139 ~~~~~~~~~~~~~~~p~~~l~VgD~~~Di  167 (204)
T d2go7a1         139 SPEAATYLLDKYQLNSDNTYYIGDRTLDV  167 (204)
T ss_dssp             SSHHHHHHHHHHTCCGGGEEEEESSHHHH
T ss_pred             hHHHHHHHHHHhCCCCceEEEEeCCHHHH
Confidence            99999999999999999999999998874

>d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Putative hydrolase SP0805
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.91  E-value=1.5e-24  Score=151.65  Aligned_cols=155  Identities=13%  Similarity=0.152  Sum_probs=110.2

Q ss_pred             CCceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccHH-HHHHcCCCCCccchhhhhh
Q 029593            3 SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLA-GLRALGYDIGADDYHGFVH   81 (191)
Q Consensus         3 ~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~   81 (191)
                      |++|+|+||+||||+|+...+..++.+     .++..|++......     ....+.... .+......  .+.+.+.+.
T Consensus         1 M~~k~viFD~DGTL~dt~~~~~~~~~~-----~~~~~g~~~~~~~~-----~~~~~~~~~~~~~~~~~~--~~~~~~~~~   68 (187)
T d2fi1a1           1 MKYHDYIWDLGGTLLDNYETSTAAFVE-----TLALYGITQDHDSV-----YQALKVSTPFAIETFAPN--LENFLEKYK   68 (187)
T ss_dssp             CCCSEEEECTBTTTBCHHHHHHHHHHH-----HHHHTTCCCCHHHH-----HHHHHHCHHHHHHHHCTT--CTTHHHHHH
T ss_pred             CCCCEEEEeCCCCcccCHHHHHHHHHH-----HHHHcCCCccHHHH-----HhhhhccchhhhhhhhHH--HHHHHHHHH
Confidence            468999999999999998888878876     45667876543322     111111111 22222211  122222221


Q ss_pred             cC--CCCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCC
Q 029593           82 GR--LPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLL  156 (191)
Q Consensus        82 ~~--~~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~  156 (191)
                      +.  .......++||+.++|..|+++|+   ++||++.... ..++.+++..+|+.++++++...              .
T Consensus        69 ~~~~~~~~~~~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~~-~~l~~~~l~~~fd~i~~~~~~~~--------------~  133 (187)
T d2fi1a1          69 ENEARELEHPILFEGVSDLLEDISNQGGRHFLVSHRNDQVL-EILEKTSIAAYFTEVVTSSSGFK--------------R  133 (187)
T ss_dssp             HHHHHHTTSCCBCTTHHHHHHHHHHTTCEEEEECSSCTHHH-HHHHHTTCGGGEEEEECGGGCCC--------------C
T ss_pred             HHHHHHhhcCcccchhHHHHHHHHhhhccccccccCccchh-hhhhhhccccccccccccccccc--------------c
Confidence            11  013346889999999999999987   8998776554 57899999999999999998776              4


Q ss_pred             CCCHHHHHHHHHHcCCCCCceEEecCcccc
Q 029593          157 KPSMDAMKLALHVANVDPRHAVRQSSFLIF  186 (191)
Q Consensus       157 kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~  186 (191)
                      ||+|+++..+++++++  ++|++|||+.+|
T Consensus       134 KP~p~~~~~~~~~~~~--~~~l~vgDs~~D  161 (187)
T d2fi1a1         134 KPNPESMLYLREKYQI--SSGLVIGDRPID  161 (187)
T ss_dssp             TTSCHHHHHHHHHTTC--SSEEEEESSHHH
T ss_pred             CCCHHHHHHHHHHcCC--CCeEEEeCCHHH
Confidence            9999999999999986  459999999876

>d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: predicted phosphatase SP0104
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.91  E-value=1.5e-25  Score=159.23  Aligned_cols=160  Identities=23%  Similarity=0.229  Sum_probs=114.6

Q ss_pred             CCCCceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccHHHHHH-cCCCCCcc----c
Q 029593            1 MDSPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLRA-LGYDIGAD----D   75 (191)
Q Consensus         1 M~~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~----~   75 (191)
                      |+ ++|+|+||+||||+|+...+..++.+     .++++|.+.......    ....+........ ........    .
T Consensus         1 M~-~ik~VifD~DGTL~ds~~~~~~a~~~-----~~~~~g~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~   70 (210)
T d2ah5a1           1 MT-SITAIFFDLDGTLVDSSIGIHNAFTY-----TFKELGVPSPDAKTI----RGFMGPPLESSFATCLSKDQISEAVQI   70 (210)
T ss_dssp             CT-TCCEEEECSBTTTEECHHHHHHHHHH-----HHHHHTCCCCCHHHH----HHTSSSCHHHHHHTTSCGGGHHHHHHH
T ss_pred             CC-CCCEEEEeCCCccccCHHHHHHHHHH-----HHHHCCCCCCCHHHH----HHhhhcchhhhccccccchhhHHHHHH
Confidence            44 59999999999999999888888877     445667664433322    1122222222111 11111111    1


Q ss_pred             hhhhhhcCCCCCCCCCChhHHHHHHhhccCcE--EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCC
Q 029593           76 YHGFVHGRLPYDLIKPDPQLRNLLCSITQRKI--IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFP  153 (191)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~--i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~  153 (191)
                      +...... .......+++++.+++..|+.++.  ++||++...++..++++|+..+|+.+++++..+             
T Consensus        71 ~~~~~~~-~~~~~~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~~gl~~~fd~v~~~~~~~-------------  136 (210)
T d2ah5a1          71 YRSYYKA-KGIYEAQLFPQIIDLLEELSSSYPLYITTTKDTSTAQDMAKNLEIHHFFDGIYGSSPEA-------------  136 (210)
T ss_dssp             HHHHHHH-TGGGSCEECTTHHHHHHHHHTTSCEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECSSC-------------
T ss_pred             HHHHHHh-hhhhcccchhHHHHHHhhhhcccchhhcccccchhhhHHHHhhcccccccccccccccc-------------
Confidence            1111111 112346789999999999998874  999999999999999999999999999887653             


Q ss_pred             CCCCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          154 VLLKPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       154 ~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                         ||+|.++..+++++|++|+++++||||.+|.
T Consensus       137 ---~~~p~~~~~~~~~~~~~~~~~v~VGDs~~Di  167 (210)
T d2ah5a1         137 ---PHKADVIHQALQTHQLAPEQAIIIGDTKFDM  167 (210)
T ss_dssp             ---CSHHHHHHHHHHHTTCCGGGEEEEESSHHHH
T ss_pred             ---cccccccchhhhhhhcccccceeecCCHHHH
Confidence               8889999999999999999999999999874

>d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: N-acylneuraminate-9-phosphatase NANP
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.90  E-value=3.3e-23  Score=150.46  Aligned_cols=168  Identities=15%  Similarity=0.148  Sum_probs=111.6

Q ss_pred             CCceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHH--------hcccH---------HHHH
Q 029593            3 SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKA--------YGSTL---------AGLR   65 (191)
Q Consensus         3 ~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~--------~~~~~---------~~~~   65 (191)
                      +++|+|+||+||||+++......++.+.+.. +....+........ .......        +....         ..+.
T Consensus         4 ~~IKaviFD~dGTL~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (247)
T d2gfha1           4 SRVRAVFFDLDNTLIDTAGASRRGMLEVIKL-LQSKYHYKEEAEII-CDKVQVKLSKECFHPYSTCITDVRTSHWEEAIQ   81 (247)
T ss_dssp             CCCCEEEECCBTTTBCHHHHHHHHHHHHHHH-HHHTTCCCTHHHHH-HHHHHHHHHTCCCC----CHHHHHHHHHHHHHH
T ss_pred             CCCcEEEEcCCCCcCcChHHHHHHHHHHHHH-hccccCcHHHHHHH-HHHHHHHHhhhhhhhhhhhhhHHHHHHHHHHHH
Confidence            3799999999999999988777777665544 23333332211110 0000000        00000         0111


Q ss_pred             HcCCCCCccchhhhhhc---CCCCCCCCCChhHHHHHHhhccCcE--EEecCChHHHHHHHhhcCCCcccceeeecccCC
Q 029593           66 ALGYDIGADDYHGFVHG---RLPYDLIKPDPQLRNLLCSITQRKI--IFTNSDRNHAITCLKRLEIADCFDQIICFETMN  140 (191)
Q Consensus        66 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~l~~~g~--i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~  140 (191)
                      ..........+......   ........++|++.++|+.|++.+.  ++||++...++..++.+|+..+|+.++++++.+
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~  161 (247)
T d2gfha1          82 ETKGGADNRKLAEECYFLWKSTRLQHMILADDVKAMLTELRKEVRLLLLTNGDRQTQREKIEACACQSYFDAIVIGGEQK  161 (247)
T ss_dssp             HHHCSSCCHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHTTSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEGGGSS
T ss_pred             HhccccchHHHHHHHHHHHHHhhhccCccCccHHHHHHHhhcccceEEeecccchhhhhhhhhccccccccccccccccc
Confidence            11112222222111100   0011236789999999999986543  899999999999999999999999999999888


Q ss_pred             CCCCCCCCCCCCCCCCCCCHHHHHHHHHHcCCCCCceEEecCcc-cc
Q 029593          141 PNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHAVRQSSFL-IF  186 (191)
Q Consensus       141 ~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~-~~  186 (191)
                      .              +||+|.+|+.+++++|++|++|++|||++ +|
T Consensus       162 ~--------------~KP~p~~~~~~~~~~~~~~~~~l~iGD~~~~D  194 (247)
T d2gfha1         162 E--------------EKPAPSIFYHCCDLLGVQPGDCVMVGDTLETD  194 (247)
T ss_dssp             S--------------CTTCHHHHHHHHHHHTCCGGGEEEEESCTTTH
T ss_pred             c--------------chhhhhhHHHHHHHhhcCHHhcceeccChHhH
Confidence            7              59999999999999999999999999997 55

>d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: beta-Phosphoglucomutase
species: Lactococcus lactis [TaxId: 1358]

Probab=99.90  E-value=2.4e-24  Score=154.13  Aligned_cols=159  Identities=20%  Similarity=0.226  Sum_probs=108.5

Q ss_pred             CceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHh-cccH-HHH---H-HcCCCCCccchh
Q 029593            4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAY-GSTL-AGL---R-ALGYDIGADDYH   77 (191)
Q Consensus         4 ~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~-~~~---~-~~~~~~~~~~~~   77 (191)
                      ++|+|+||+||||+|+...+..++.+     ++..+|.+......     .... +... ...   . ........+.+.
T Consensus         1 MikaiiFD~DGTL~ds~~~~~~a~~~-----~~~~~g~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   70 (221)
T d1o08a_           1 MFKAVLFDLDGVITDTAEYHFRAWKA-----LAEEIGINGVDRQF-----NEQLKGVSREDSLQKILDLADKKVSAEEFK   70 (221)
T ss_dssp             CCCEEEECCBTTTBTHHHHHHHHHHH-----HHHHTTCCCCCHHH-----HTTTTTCCHHHHHHHHHTTSSSCCCHHHHH
T ss_pred             CCcEEEEcCCCCeEcCHHHHHHHHHH-----HHHHcCCCCChHHH-----HHHHhhccchhhhhhccccccccchhhhhh
Confidence            47999999999999988777777776     44556655322211     1110 1111 111   1 111222222221


Q ss_pred             h-------hhhcCC-CCCCCCCChhHHHHHHhhccCcE-EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCC
Q 029593           78 G-------FVHGRL-PYDLIKPDPQLRNLLCSITQRKI-IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATR  148 (191)
Q Consensus        78 ~-------~~~~~~-~~~~~~~~~~~~~~l~~l~~~g~-i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~  148 (191)
                      .       .+.... ......++||+.++++.|+++|+ +++.++.......++.+++..+|+.++++++.+.       
T Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~~~~i~i~s~~~~~~~~l~~~~l~~~f~~i~~~~~~~~-------  143 (221)
T d1o08a_          71 ELAKRKNDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASASKNGPFLLERMNLTGYFDAIADPAEVAA-------  143 (221)
T ss_dssp             HHHHHHHHHHHHHTTTCCGGGBCTTHHHHHHHHHHTTCEEEECCSCTTHHHHHHHTTCGGGCSEECCTTTSSS-------
T ss_pred             hHHHHHHhhccccccccccccccCCceeccccccccccceEEEeecchhhHHHHhhccccccccccccccccc-------
Confidence            1       111111 12346789999999999999988 3333334557888999999999999999988876       


Q ss_pred             CCCCCCCCCCCHHHHHHHHHHcCCCCCceEEecCcccc
Q 029593          149 PDEFPVLLKPSMDAMKLALHVANVDPRHAVRQSSFLIF  186 (191)
Q Consensus       149 ~~~~~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~  186 (191)
                             +||+|.+|+.+++++|++|++|++|||+.+|
T Consensus       144 -------~KP~~~~~~~~l~~~~i~~~~~l~VgD~~~d  174 (221)
T d1o08a_         144 -------SKPAPDIFIAAAHAVGVAPSESIGLEDSQAG  174 (221)
T ss_dssp             -------CTTSTHHHHHHHHHTTCCGGGEEEEESSHHH
T ss_pred             -------cccChHHHHHHHHHcCCCCceEEEEecCHHH
Confidence                   5999999999999999999999999999876

>d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein Atu0790
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.89  E-value=6.5e-24  Score=151.92  Aligned_cols=161  Identities=19%  Similarity=0.172  Sum_probs=112.0

Q ss_pred             CceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccH-----HHHHHcCCCCCccchhh
Q 029593            4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTL-----AGLRALGYDIGADDYHG   78 (191)
Q Consensus         4 ~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~   78 (191)
                      .+|+|+||+||||+|+.+.+..++.+     .+++.|.+.......    ....+...     ......+.+...+.+..
T Consensus         1 ~~kaviFD~DGtL~dt~~~~~~a~~~-----~~~~~g~~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~   71 (222)
T d2fdra1           1 GFDLIIFDCDGVLVDSEIIAAQVESR-----LLTEAGYPISVEEMG----ERFAGMTWKNILLQVESEASIPLSASLLDK   71 (222)
T ss_dssp             CCSEEEECSBTTTBCCHHHHHHHHHH-----HHHHTTCCCCHHHHH----HHHTTCCHHHHHHHHHHHHCCCCCTHHHHH
T ss_pred             CceEEEECCCCcccCCHHHHHHHHHH-----HHHHcCCCCCHHHHH----HHHhhhccccccccccccccccccccchhH
Confidence            48999999999999999888888877     446667664322211    11112111     11222232332222211


Q ss_pred             ---hhhcCCCCCCCCCChhHHHHHHhhccCcEEEecCChHHHHHHHhhcCCCcccceeeec-ccCCCCCCCCCCCCCCCC
Q 029593           79 ---FVHGRLPYDLIKPDPQLRNLLCSITQRKIIFTNSDRNHAITCLKRLEIADCFDQIICF-ETMNPNLSKATRPDEFPV  154 (191)
Q Consensus        79 ---~~~~~~~~~~~~~~~~~~~~l~~l~~~g~i~t~~~~~~~~~~l~~~~l~~~f~~i~~~-~~~~~~~~~~~~~~~~~~  154 (191)
                         .+.... .....+.|++.++++.|+.++.++||+....+...++++++..+|+.++.+ ++.+.            .
T Consensus        72 ~~~~~~~~~-~~~~~~~~g~~~~L~~l~~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~------------~  138 (222)
T d2fdra1          72 SEKLLDMRL-ERDVKIIDGVKFALSRLTTPRCICSNSSSHRLDMMLTKVGLKPYFAPHIYSAKDLGA------------D  138 (222)
T ss_dssp             HHHHHHHHH-HHHCCBCTTHHHHHHHCCSCEEEEESSCHHHHHHHHHHTTCGGGTTTCEEEHHHHCT------------T
T ss_pred             HHHHHHHHh-hhccchhhhHHHHhhhccccceeeeecchhhhhhhhcccccccccceeecccccccc------------c
Confidence               111111 123688999999999999988899999999999999999999999986543 33221            1


Q ss_pred             CCCCCHHHHHHHHHHcCCCCCceEEecCcccc
Q 029593          155 LLKPSMDAMKLALHVANVDPRHAVRQSSFLIF  186 (191)
Q Consensus       155 ~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~  186 (191)
                      .+||+|++|..+++++|++|++|++|||+..|
T Consensus       139 ~~KP~~~~~~~~~~~l~~~p~~~l~vgDs~~d  170 (222)
T d2fdra1         139 RVKPKPDIFLHGAAQFGVSPDRVVVVEDSVHG  170 (222)
T ss_dssp             CCTTSSHHHHHHHHHHTCCGGGEEEEESSHHH
T ss_pred             ccccCHHHHHHHHHhhCCCCceEEEEcCCHHH
Confidence            25999999999999999999999999999876

>d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Phosphonoacetaldehyde hydrolase
species: Bacillus cereus [TaxId: 1396]

Probab=99.88  E-value=3.3e-23  Score=151.46  Aligned_cols=85  Identities=13%  Similarity=0.068  Sum_probs=77.2

Q ss_pred             CCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCccc-ceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHH
Q 029593           89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCF-DQIICFETMNPNLSKATRPDEFPVLLKPSMDAMK  164 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f-~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~  164 (191)
                      ..++||+.++|..|+++|+   ++||++...++..++.+++..+| +.++++++.+.              +||+|++|.
T Consensus        98 ~~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~~~f~d~~~~~d~~~~--------------~KP~p~~~~  163 (257)
T d1swva_          98 ASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVPA--------------GRPYPWMCY  163 (257)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCCSCCBCGGGSSC--------------CTTSSHHHH
T ss_pred             CccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHHhhcccccccccccccccc--------------cccChHHHH
Confidence            5789999999999999987   99999999999999999999887 77888888776              499999999


Q ss_pred             HHHHHcCCC-CCceEEecCccccc
Q 029593          165 LALHVANVD-PRHAVRQSSFLIFY  187 (191)
Q Consensus       165 ~~~~~~~~~-p~~~i~iGDs~~~~  187 (191)
                      .+++++|+. +++|++|||+.+|.
T Consensus       164 ~~~~~l~~~p~~~~v~VgDs~~Di  187 (257)
T d1swva_         164 KNAMELGVYPMNHMIKVGDTVSDM  187 (257)
T ss_dssp             HHHHHHTCCSGGGEEEEESSHHHH
T ss_pred             HHHHHhCCCCcceEEEEeCChhhH
Confidence            999999996 59999999998764

>d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Xanthobacter autotrophicus [TaxId: 280]

Probab=99.87  E-value=3.2e-22  Score=144.78  Aligned_cols=86  Identities=22%  Similarity=0.282  Sum_probs=79.8

Q ss_pred             CCCCChhHHHHHHhhccCcE-EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q 029593           88 LIKPDPQLRNLLCSITQRKI-IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLA  166 (191)
Q Consensus        88 ~~~~~~~~~~~l~~l~~~g~-i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~  166 (191)
                      ...++|++.++|..|+..++ ++||++...+...++..++..+|+.++++++.+.              .||+|++|..+
T Consensus        91 ~~~~~~~~~~~L~~l~~~~~~v~s~~~~~~~~~~~~~~~~~~~fd~v~~s~~~~~--------------~KP~p~~f~~a  156 (245)
T d1qq5a_          91 RLTPYPDAAQCLAELAPLKRAILSNGAPDMLQALVANAGLTDSFDAVISVDAKRV--------------FKPHPDSYALV  156 (245)
T ss_dssp             SCCBCTTHHHHHHHHTTSEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGGTC--------------CTTSHHHHHHH
T ss_pred             ccccchhhhHHHHHHhhhceeEEeccchHHHHHHHhhcccccccccccccccccc--------------cCccHHHHHHH
Confidence            46889999999999998887 9999999999999999999999999999998887              49999999999


Q ss_pred             HHHcCCCCCceEEecCccccc
Q 029593          167 LHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       167 ~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      ++++|++|++|++|||+.+|-
T Consensus       157 ~~~lg~~p~e~l~VgD~~~di  177 (245)
T d1qq5a_         157 EEVLGVTPAEVLFVSSNGFDV  177 (245)
T ss_dssp             HHHHCCCGGGEEEEESCHHHH
T ss_pred             HHHhCCChhhEEEEeCCHHHH
Confidence            999999999999999998763

>d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: Hypothetical protein PH0459
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=99.87  E-value=2.9e-22  Score=144.13  Aligned_cols=85  Identities=27%  Similarity=0.255  Sum_probs=77.0

Q ss_pred             CCCChhHHHHHHhhccCcE--EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q 029593           89 IKPDPQLRNLLCSITQRKI--IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLA  166 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~--i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~  166 (191)
                      ..++||+.++|+.|++...  ++||++...++.+++.+|+..+|+.++++++.+.              +||+|.+|+.+
T Consensus        99 ~~~~p~~~~~L~~l~~~~~i~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~~--------------~KP~~~~~~~~  164 (230)
T d1x42a1          99 GELYPEVVEVLKSLKGKYHVGMITDSDTEYLMAHLDALGIKDLFDSITTSEEAGF--------------FKPHPRIFELA  164 (230)
T ss_dssp             CCBCTTHHHHHHHHBTTBEEEEEESSCHHHHHHHHHHHTCGGGCSEEEEHHHHTB--------------CTTSHHHHHHH
T ss_pred             CcccccHHHHHHHhhccCceeeeeccccccchhhhcccccccccccccccccccc--------------cchhhHHHHHH
Confidence            5789999999999986432  8999999999999999999999999999998877              49999999999


Q ss_pred             HHHcCCCCCceEEecCcc-ccc
Q 029593          167 LHVANVDPRHAVRQSSFL-IFY  187 (191)
Q Consensus       167 ~~~~~~~p~~~i~iGDs~-~~~  187 (191)
                      ++++|++|++|++|||++ +|.
T Consensus       165 ~~~l~~~p~~~l~vgD~~~~Di  186 (230)
T d1x42a1         165 LKKAGVKGEEAVYVGDNPVKDC  186 (230)
T ss_dssp             HHHHTCCGGGEEEEESCTTTTH
T ss_pred             HhhhcccccccceeecCcHhHH
Confidence            999999999999999985 563

>d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein CT1708
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.87  E-value=5e-23  Score=147.92  Aligned_cols=168  Identities=16%  Similarity=0.110  Sum_probs=108.8

Q ss_pred             ceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhC-----CCHHHHHHHHHHHHHHhcccHHHHHHcCCCCCccchhhh
Q 029593            5 FNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCG-----FSETKASSLRVELFKAYGSTLAGLRALGYDIGADDYHGF   79 (191)
Q Consensus         5 ~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (191)
                      .|+|+||+||||+++...+..++.+++.+.......     .................+......... .+...+.+...
T Consensus         2 ~klviFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~   80 (228)
T d2hcfa1           2 RTLVLFDIDGTLLKVESMNRRVLADALIEVYGTEGSTGSHDFSGKMDGAIIYEVLSNVGLERAEIADK-FDKAKETYIAL   80 (228)
T ss_dssp             CEEEEECCBTTTEEECTHHHHHHHHHHHHHHSCCCCC---CCTTCCHHHHHHHHHHTTTCCHHHHHHH-HHHHHHHHHHH
T ss_pred             ceEEEEeCCCCcccCHHHHHHHHHHHHHHHcCCCccHHHHHHhcCchHHHHHHHHHHhCCChHHHHHH-HHHHHHHHHHH
Confidence            589999999999999988888887765443211000     000000111111122222111111000 00001222223


Q ss_pred             hhcCCCCCCCCCChhHHHHHHhhccCc-E---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCC
Q 029593           80 VHGRLPYDLIKPDPQLRNLLCSITQRK-I---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVL  155 (191)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~l~~l~~~g-~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~  155 (191)
                      +..........++||+.++|+.|+++| +   ++||++...+...++.+|+..+|+.++++++...              
T Consensus        81 ~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~--------------  146 (228)
T d2hcfa1          81 FRERARREDITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPFGAFADDALD--------------  146 (228)
T ss_dssp             HHHHCCGGGEEECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCSCEECTTTCSS--------------
T ss_pred             HHHHhhccCceecCchHHHHhhhhccccccccccCCCcchhhhhhhhhhccccccccccccccccc--------------
Confidence            333222344678999999999999986 5   8899999999999999999999999999887766              


Q ss_pred             CCCCHHHHHHHHHHc---CCCCCceEEecCccccc
Q 029593          156 LKPSMDAMKLALHVA---NVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       156 ~kp~~~~~~~~~~~~---~~~p~~~i~iGDs~~~~  187 (191)
                      .||+|..+...+..+   +++|++|+||||+++|.
T Consensus       147 ~k~~p~~~~~~~~~~~~~~~~p~~~l~VGD~~~Di  181 (228)
T d2hcfa1         147 RNELPHIALERARRMTGANYSPSQIVIIGDTEHDI  181 (228)
T ss_dssp             GGGHHHHHHHHHHHHHCCCCCGGGEEEEESSHHHH
T ss_pred             ccchhHHHHHHhhhhcccCCChhHheeecCChHHH
Confidence            489888876666555   79999999999999873

>d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Pseudomonas sp., strain YL [TaxId: 306]

Probab=99.87  E-value=2.5e-22  Score=143.24  Aligned_cols=84  Identities=17%  Similarity=0.256  Sum_probs=78.6

Q ss_pred             CCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q 029593           89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKL  165 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~  165 (191)
                      ..+++++.++++.+++.++   ++||+.....+..++..++..+|+.++++++.+.              .||+|..|+.
T Consensus        92 ~~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~~~fd~~~~s~~~~~--------------~KP~p~~~~~  157 (220)
T d1zrna_          92 LAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDHLLSVDPVQV--------------YKPDNRVYEL  157 (220)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEESGGGTC--------------CTTSHHHHHH
T ss_pred             ccccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhccccccccceeeeeeeec--------------cccHHHHHHH
Confidence            6788999999999999886   9999999999999999999999999999998887              4999999999


Q ss_pred             HHHHcCCCCCceEEecCcccc
Q 029593          166 ALHVANVDPRHAVRQSSFLIF  186 (191)
Q Consensus       166 ~~~~~~~~p~~~i~iGDs~~~  186 (191)
                      +++++|++|++|++|||++.|
T Consensus       158 ~~~~~g~~p~e~l~VgD~~~D  178 (220)
T d1zrna_         158 AEQALGLDRSAILFVASNAWD  178 (220)
T ss_dssp             HHHHHTSCGGGEEEEESCHHH
T ss_pred             HHHHhCCCCceEEEEecChHh
Confidence            999999999999999999865

>d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: E-1 enzyme
species: Human(Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=6.3e-20  Score=132.51  Aligned_cols=85  Identities=5%  Similarity=-0.047  Sum_probs=74.6

Q ss_pred             CCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeec-ccCCCCCCCCCCCCCCCCCCCCCHHHH
Q 029593           88 LIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICF-ETMNPNLSKATRPDEFPVLLKPSMDAM  163 (191)
Q Consensus        88 ~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~-~~~~~~~~~~~~~~~~~~~~kp~~~~~  163 (191)
                      ...++||+.+++..|+++|+   ++||++....+..++..++..+++..... +....              +||+|.+|
T Consensus       125 ~~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--------------~KP~p~~~  190 (253)
T d1zs9a1         125 KAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFDTKIG--------------HKVESESY  190 (253)
T ss_dssp             CBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCSEEECGGGC--------------CTTCHHHH
T ss_pred             ccccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHcCcchhhhhcceeeccccc--------------cCCCcHHH
Confidence            36789999999999999887   99999999999999999999888875543 33333              59999999


Q ss_pred             HHHHHHcCCCCCceEEecCcccc
Q 029593          164 KLALHVANVDPRHAVRQSSFLIF  186 (191)
Q Consensus       164 ~~~~~~~~~~p~~~i~iGDs~~~  186 (191)
                      ..+++++|++|++|+||||+.+|
T Consensus       191 ~~~~~~~~~~p~~~l~vgD~~~d  213 (253)
T d1zs9a1         191 RKIADSIGCSTNNILFLTDVTRE  213 (253)
T ss_dssp             HHHHHHHTSCGGGEEEEESCHHH
T ss_pred             HHHHHHhCCCcCcEEEEeCCHHH
Confidence            99999999999999999999876

>d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Magnesium-dependent phosphatase-1, Mdp1
domain: Magnesium-dependent phosphatase-1, Mdp1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.82  E-value=1.6e-20  Score=128.39  Aligned_cols=79  Identities=13%  Similarity=0.079  Sum_probs=69.5

Q ss_pred             CCCChhHHHHHHhhccCcE---EEecCCh-HHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHH
Q 029593           89 IKPDPQLRNLLCSITQRKI---IFTNSDR-NHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMK  164 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~-~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~  164 (191)
                      +.++||+.++|+.|+++|+   |+||++. ...+..++.+++..+++.+.+.                   .||+|..+.
T Consensus        45 ~~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~~~~~~~~~~~-------------------~kp~~~~~~  105 (164)
T d1u7pa_          45 IQLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKYFIQREIY-------------------PGSKVTHFE  105 (164)
T ss_dssp             ECCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTCGGGCSEEEES-------------------SSCHHHHHH
T ss_pred             cccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhcccccccceeeecc-------------------cCCChHHHH
Confidence            6899999999999999998   8898765 4567778999998888877654                   299999999


Q ss_pred             HHHHHcCCCCCceEEecCcccc
Q 029593          165 LALHVANVDPRHAVRQSSFLIF  186 (191)
Q Consensus       165 ~~~~~~~~~p~~~i~iGDs~~~  186 (191)
                      .+++++|++|++|++|||+..|
T Consensus       106 ~~~~~~~~~~~~~l~igD~~~d  127 (164)
T d1u7pa_         106 RLHHKTGVPFSQMVFFDDENRN  127 (164)
T ss_dssp             HHHHHHCCCGGGEEEEESCHHH
T ss_pred             HHHHHhCCChHHEEEEcCCHHH
Confidence            9999999999999999999876

>d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.81  E-value=4.1e-21  Score=136.91  Aligned_cols=85  Identities=15%  Similarity=0.148  Sum_probs=74.4

Q ss_pred             CCCChhHHHHHHhhccCcE---EEecCC----hHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHH
Q 029593           89 IKPDPQLRNLLCSITQRKI---IFTNSD----RNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMD  161 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~---i~t~~~----~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~  161 (191)
                      ..++|++.++|..|+++|+   ++||+.    ....+..+...++.++||.++++++.+.              +||+|.
T Consensus        96 ~~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~fd~i~~s~~~~~--------------~KP~p~  161 (222)
T d1cr6a1          96 RSINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQHFDFLIESCQVGM--------------IKPEPQ  161 (222)
T ss_dssp             CEECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHGGGCSEEEEHHHHSC--------------CTTCHH
T ss_pred             CCCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhcChHhhhceeeehhhccC--------------CCCChH
Confidence            5789999999999999987   777643    3456667788899999999999998877              499999


Q ss_pred             HHHHHHHHcCCCCCceEEecCccccc
Q 029593          162 AMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       162 ~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      +|+.++++++++|++|+||||+..|.
T Consensus       162 ~~~~~~~~~~v~p~~~l~IgD~~~Di  187 (222)
T d1cr6a1         162 IYNFLLDTLKAKPNEVVFLDDFGSNL  187 (222)
T ss_dssp             HHHHHHHHHTSCTTSEEEEESSSTTT
T ss_pred             HHHHHHHHhCCCcceEEEEECCHHHH
Confidence            99999999999999999999998774

>d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=2.2e-20  Score=132.78  Aligned_cols=84  Identities=17%  Similarity=0.106  Sum_probs=72.3

Q ss_pred             CCCChhHHHHHHhhccCcE---EEecCChH----HHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHH
Q 029593           89 IKPDPQLRNLLCSITQRKI---IFTNSDRN----HAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMD  161 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~----~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~  161 (191)
                      ..+.|++.+++..|+++|+   ++||+...    ..+......++..+||.++++++.+.              +||+|.
T Consensus        98 ~~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~fd~i~~s~~~~~--------------~KP~~~  163 (225)
T d1zd3a1          98 RKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQVGM--------------VKPEPQ  163 (225)
T ss_dssp             CEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTSSEEEEHHHHTC--------------CTTCHH
T ss_pred             CCCCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhhcChHhhccEEEecccccc--------------chhHHH
Confidence            5789999999999999987   88987554    34444556678899999999998887              499999


Q ss_pred             HHHHHHHHcCCCCCceEEecCcccc
Q 029593          162 AMKLALHVANVDPRHAVRQSSFLIF  186 (191)
Q Consensus       162 ~~~~~~~~~~~~p~~~i~iGDs~~~  186 (191)
                      +|+.+++.+|++|++|++|||+..|
T Consensus       164 ~~~~~~~~~~~~p~e~l~VgD~~~D  188 (225)
T d1zd3a1         164 IYKFLLDTLKASPSEVVFLDDIGAN  188 (225)
T ss_dssp             HHHHHHHHHTCCGGGEEEEESCHHH
T ss_pred             HHHHHhhhcccCccceeEEecCHHH
Confidence            9999999999999999999999876

>d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Putative phosphatase YihX
species: Escherichia coli [TaxId: 562]

Probab=99.76  E-value=3.1e-20  Score=129.22  Aligned_cols=85  Identities=16%  Similarity=0.231  Sum_probs=74.9

Q ss_pred             CCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhc-CCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHH
Q 029593           89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRL-EIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMK  164 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~-~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~  164 (191)
                      ..+.+++.+++..++++|+   ++||++.......+..+ ++..+|+.++++++.+.              +||+|.+++
T Consensus        83 ~~~~~~~~~l~~~l~~~~~~~~i~t~~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~--------------~Kp~~~~~~  148 (197)
T d2b0ca1          83 VALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQDLGM--------------RKPEARIYQ  148 (197)
T ss_dssp             EEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHCSEEEEHHHHTC--------------CTTCHHHHH
T ss_pred             cccCchhHHHHHHHHhcCCeEEEEeCccHHHHHHHHHHcccchhhccceeecccccc--------------cccchHHHH
Confidence            5788999999999999887   88888877766666665 78899999999988887              499999999


Q ss_pred             HHHHHcCCCCCceEEecCccccc
Q 029593          165 LALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       165 ~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      .+++.+|++|++|++|||+++|.
T Consensus       149 ~~~~~~~~~~~~~l~vgDs~~di  171 (197)
T d2b0ca1         149 HVLQAEGFSPSDTVFFDDNADNI  171 (197)
T ss_dssp             HHHHHHTCCGGGEEEEESCHHHH
T ss_pred             HHHHhcCCCCCeEEEEeCCHHHH
Confidence            99999999999999999999874

>d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: Protein UTR4
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.74  E-value=2.5e-19  Score=127.48  Aligned_cols=82  Identities=9%  Similarity=0.035  Sum_probs=65.0

Q ss_pred             CCCChhHHHHHHhhccCcEEEecCChHH-----------HHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCC
Q 029593           89 IKPDPQLRNLLCSITQRKIIFTNSDRNH-----------AITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLK  157 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~i~t~~~~~~-----------~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~k  157 (191)
                      ..+.+++.+++..++..++ .++.....           ....++.+++..+|+.+++++....               |
T Consensus        96 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~Fd~v~~~~~~~~---------------K  159 (225)
T d2g80a1          96 APVYADAIDFIKRKKRVFI-YSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSYIDGYFDINTSGK---------------K  159 (225)
T ss_dssp             BCCCHHHHHHHHHCSCEEE-ECSSCHHHHHHHHHSBCCTTCTTSCCBCCGGGCCEEECHHHHCC---------------T
T ss_pred             ccchhhHHHHHhhHHhhhh-hhhccchhhhhhhhhhhhhHHHHHHhcCCccccceeeeccccCC---------------C
Confidence            5678999999988777654 33333332           2334566789999999999876553               9


Q ss_pred             CCHHHHHHHHHHcCCCCCceEEecCcccc
Q 029593          158 PSMDAMKLALHVANVDPRHAVRQSSFLIF  186 (191)
Q Consensus       158 p~~~~~~~~~~~~~~~p~~~i~iGDs~~~  186 (191)
                      |+|.+|..+++++|++|++|++|||+.+|
T Consensus       160 P~p~~f~~~~~~lg~~p~e~l~VgD~~~D  188 (225)
T d2g80a1         160 TETQSYANILRDIGAKASEVLFLSDNPLE  188 (225)
T ss_dssp             TCHHHHHHHHHHHTCCGGGEEEEESCHHH
T ss_pred             CChhHhHHHHHhcccCchhceeecCCHHH
Confidence            99999999999999999999999999876

>d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: MtnX-like
domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX
species: Bacillus subtilis [TaxId: 1423]

Probab=99.74  E-value=3.9e-18  Score=121.80  Aligned_cols=95  Identities=7%  Similarity=-0.052  Sum_probs=71.3

Q ss_pred             CCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccce---eeecccCCCCCCCCCCCCCCCCCCCCCHHH
Q 029593           89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQ---IICFETMNPNLSKATRPDEFPVLLKPSMDA  162 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~---i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~  162 (191)
                      ++++|++.+++..|+++|+   ++|++....++.+++++++..++..   .+..+.....  .+  .......++|++..
T Consensus        74 ~~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~~~~an~~~~~~~~~~~~--~~--~~~~~~~~~~k~~~  149 (226)
T d2feaa1          74 AKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYIHID--WP--HSCKGTCSNQCGCC  149 (226)
T ss_dssp             CCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGGGEEEEEEECSSSBCEEE--CT--TCCCTTCCSCCSSC
T ss_pred             cchhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHcCCccceeeeeEEEeCCcceec--cc--cccccccccCCHHH
Confidence            6789999999999999987   9999999999999999988766532   1111111000  00  01122335778899


Q ss_pred             HHHHHHHcCCCCCceEEecCccccc
Q 029593          163 MKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       163 ~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      ...+++.++++|++|++||||.+|.
T Consensus       150 ~~~~~~~~~~~~~~~i~iGDs~~Dl  174 (226)
T d2feaa1         150 KPSVIHELSEPNQYIIMIGDSVTDV  174 (226)
T ss_dssp             HHHHHHHHCCTTCEEEEEECCGGGH
T ss_pred             HHHHHHHhcCCCceEEEEeCchhhH
Confidence            9999999999999999999999985

>d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=5.9e-17  Score=115.24  Aligned_cols=95  Identities=12%  Similarity=0.080  Sum_probs=63.2

Q ss_pred             CCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcc--cceeeecccCCCCCCCCCCCCCCCCCCCCCHHHH
Q 029593           89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADC--FDQIICFETMNPNLSKATRPDEFPVLLKPSMDAM  163 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~--f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~  163 (191)
                      +.++||+.+++..|+++|+   ++|++....++.+++.+|+..+  +..-+.....+.  +++-....+...++.+...+
T Consensus        81 ~~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~~v~an~~~~~~~G~--~~g~~~~~p~~~~~~K~~~v  158 (217)
T d1nnla_          81 PHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGE--YAGFDETQPTAESGGKGKVI  158 (217)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTTSC--EEEECTTSGGGSTTHHHHHH
T ss_pred             cccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCcccceeeeeeeeeehhc--cccceeeeeeeccchHHHHH
Confidence            6789999999999999998   9999999999999999999743  111010010000  00000111222334466777


Q ss_pred             HHHHHHcCCCCCceEEecCccccc
Q 029593          164 KLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       164 ~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      +.+.+.  .++++|++||||.||-
T Consensus       159 ~~~~~~--~~~~~~~~vGDs~~Di  180 (217)
T d1nnla_         159 KLLKEK--FHFKKIIMIGDGATDM  180 (217)
T ss_dssp             HHHHHH--HCCSCEEEEESSHHHH
T ss_pred             HHHHhc--cCccccEEEEeCHhhH
Confidence            776654  4578999999999985

>d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=99.64  E-value=3.3e-16  Score=109.83  Aligned_cols=164  Identities=12%  Similarity=0.119  Sum_probs=100.3

Q ss_pred             CCceEEEEecCCCCCCChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccHHHHH---HcCCCCCccchhhh
Q 029593            3 SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLR---ALGYDIGADDYHGF   79 (191)
Q Consensus         3 ~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~   79 (191)
                      ++.|+|+||+||||++++.     +..     +++..|+.... ...................   ..............
T Consensus         2 ~kkKlv~FDlDGTL~d~es-----~~~-----l~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   70 (210)
T d1j97a_           2 KKKKLILFDFDSTLVNNET-----IDE-----IAREAGVEEEV-KKITKEAMEGKLNFEQSLRKRVSLLKDLPIEKVEKA   70 (210)
T ss_dssp             CCCCEEEECCCCCCBSSCH-----HHH-----HHHHTTCHHHH-HHHHHHHHTTSSCHHHHHHHHHHTTTTCBHHHHHHH
T ss_pred             CCCeEEEEeCCCCcCCchH-----HHH-----HHHHcCCcHHH-HHHHHHHhcccchhHHHHHHHHHHHhhhHHHHHHHH
Confidence            4689999999999999873     222     44555654322 1111111111111111111   11111111111111


Q ss_pred             hhcCCCCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCC
Q 029593           80 VHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLL  156 (191)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~  156 (191)
                      ..      ...+.+++.+.++.++.+|.   ++|++.........+..+....+......+.......    .......+
T Consensus        71 ~~------~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~  140 (210)
T d1j97a_          71 IK------RITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDGKLTGD----VEGEVLKE  140 (210)
T ss_dssp             HH------TCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEEEEE----EECSSCST
T ss_pred             hh------hhhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhccchhhhhhhhhcccccccccc----cccccccc
Confidence            12      25788999999999999887   7888888888888888888777665444333211000    01122335


Q ss_pred             CCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          157 KPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       157 kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      ++++.....+++.+++.|+++++||||.||.
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~i~iGDs~nDi  171 (210)
T d1j97a_         141 NAKGEILEKIAKIEGINLEDTVAVGDGANDI  171 (210)
T ss_dssp             THHHHHHHHHHHHHTCCGGGEEEEESSGGGH
T ss_pred             ccccchhhhHHHHhcccccceEEecCCcChH
Confidence            7789999999999999999999999999994

>d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain
species: Escherichia coli [TaxId: 562]

Probab=99.63  E-value=1e-16  Score=108.66  Aligned_cols=88  Identities=14%  Similarity=0.152  Sum_probs=58.7

Q ss_pred             CCCChhHHHHHHhhccCcE---EEecCCh---------------HHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCC
Q 029593           89 IKPDPQLRNLLCSITQRKI---IFTNSDR---------------NHAITCLKRLEIADCFDQIICFETMNPNLSKATRPD  150 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~---------------~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~  150 (191)
                      +.++||+.++|..|+++|+   ++||.+.               ..+...+...++.  ++.++.+.....         
T Consensus        29 ~~~~pgv~e~L~~L~~~g~~l~i~TNq~~ia~~~~~~~~~~~~~~~l~~~l~~~~~~--~~~i~~~~~~~~---------   97 (161)
T d2fpwa1          29 LAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQ--FDEVLICPHLPA---------   97 (161)
T ss_dssp             CCBCTTHHHHHHHHHHTTEEEEEEEECTTTTSTTSCHHHHHHHHHHHHHHHHHTTCC--EEEEEEECCCGG---------
T ss_pred             ceECccHHHHHHHHHHcCCceeeecccccchhHHHHHHHhhhhhhhhhhhccccccc--cceeeecccccc---------
Confidence            6789999999999999998   9999651               1233444555552  333332222111         


Q ss_pred             CCCCCCCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          151 EFPVLLKPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       151 ~~~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      ......||+|.++..++++++++|++|+||||+..|.
T Consensus        98 ~~~~~~KP~p~~~~~~~~~~~id~~~~~~IGD~~~Di  134 (161)
T d2fpwa1          98 DECDCRKPKVKLVERYLAEQAMDRANSYVIGDRATDI  134 (161)
T ss_dssp             GCCSSSTTSSGGGGGGC----CCGGGCEEEESSHHHH
T ss_pred             ccccccccccHHHHHHHHhcCCChhcEEEECCCHHHH
Confidence            1222359999999999999999999999999998773

>d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Hypothetical protein Mll2559
species: Mesorhizobium loti [TaxId: 381]

Probab=99.58  E-value=2.7e-15  Score=105.71  Aligned_cols=95  Identities=14%  Similarity=0.112  Sum_probs=63.1

Q ss_pred             CCCChhHHHHHHhhccCcE---EEecCCh---------------HHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCC
Q 029593           89 IKPDPQLRNLLCSITQRKI---IFTNSDR---------------NHAITCLKRLEIADCFDQIICFETMNPNLSKATRPD  150 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~---------------~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~  150 (191)
                      +.++||+.++|..|+++|+   |+||.+.               ..+...++..|+  .++.++........  ......
T Consensus        47 ~~l~pgv~e~L~~L~~~G~~l~IvTNQ~gi~~g~~~~~~~~~~~~~~~~~l~~~g~--~~~~~~~~~~~~~~--~~~~~~  122 (209)
T d2o2xa1          47 IVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGV--FVDMVLACAYHEAG--VGPLAI  122 (209)
T ss_dssp             CCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTC--CCSEEEEECCCTTC--CSTTCC
T ss_pred             eEecccHHHHHHHHHhhCCeEEEecccccchhhhhhhhhhhhhhhHHHHHhhhccc--ccceEEEecccccc--cccccc
Confidence            5789999999999999988   9998431               122233344343  33444433322110  000011


Q ss_pred             CCCCCCCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          151 EFPVLLKPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       151 ~~~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      ......||+|.++..++++++++|++|+||||+.+|.
T Consensus       123 ~~~~~rKP~p~ml~~a~~~~~i~~~~~~~VGD~~~Di  159 (209)
T d2o2xa1         123 PDHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADM  159 (209)
T ss_dssp             SSCTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHH
T ss_pred             cccccccccchhhhHhHHHhCCCccceEEeCCCHHHH
Confidence            2233459999999999999999999999999999874

>d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB
species: Escherichia coli [TaxId: 562]

Probab=99.50  E-value=3.8e-14  Score=97.80  Aligned_cols=95  Identities=11%  Similarity=-0.028  Sum_probs=61.0

Q ss_pred             CCCChhHHHHHHhhccCcE---EEecCChH---------------HHHHHHhhcCCCcccceeeecccCCCCCCCCCCCC
Q 029593           89 IKPDPQLRNLLCSITQRKI---IFTNSDRN---------------HAITCLKRLEIADCFDQIICFETMNPNLSKATRPD  150 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~---------------~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~  150 (191)
                      +.++||+.+++..|+++|+   ++||.+.-               .....+...++ ...+..++.......   .....
T Consensus        26 ~~~~~gv~e~l~~L~~~g~~~~ivTNq~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~cp~~p~~~---~~~~~  101 (182)
T d2gmwa1          26 FEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDV-DLDGIYYCPHHPQGS---VEEFR  101 (182)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTC-CCSEEEEECCBTTCS---SGGGB
T ss_pred             eeECCCHHHHHHHHhhcCchhhhhhccchhhhhhhHHHhhhhhhhhhhhhhhhhcc-cccceeecccccccc---ccccc
Confidence            5788999999999999987   99997631               11112222232 111222332211000   00001


Q ss_pred             CCCCCCCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          151 EFPVLLKPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       151 ~~~~~~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      ......||+|.++..++++++++|++++||||+.+|-
T Consensus       102 ~~~~~rKP~p~m~~~~~~~~~i~~~~s~mVGDs~~Di  138 (182)
T d2gmwa1         102 QVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDM  138 (182)
T ss_dssp             SCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHH
T ss_pred             ccccccCCccccccchhhhcccccccccccCCCHHHH
Confidence            2233469999999999999999999999999998873

>d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: NagD
species: Escherichia coli [TaxId: 562]

Probab=99.43  E-value=5.3e-15  Score=107.11  Aligned_cols=31  Identities=23%  Similarity=0.075  Sum_probs=29.3

Q ss_pred             CCCCHHHHHHHHHHcCCCCCceEEecCccc-c
Q 029593          156 LKPSMDAMKLALHVANVDPRHAVRQSSFLI-F  186 (191)
Q Consensus       156 ~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~-~  186 (191)
                      +||+|.++..+++++|++|++|+||||+++ |
T Consensus       175 ~KP~p~~~~~a~~~lgi~p~e~v~IGD~~~~D  206 (250)
T d2c4na1         175 GKPSPWIIRAALNKMQAHSEETVIVGDNLRTD  206 (250)
T ss_dssp             STTSTHHHHHHHHHHTCCGGGEEEEESCTTTH
T ss_pred             ccchhhhHhhhhhhhcCCchheEEecCChHHH
Confidence            599999999999999999999999999975 6

>d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative phosphatase SMU.1415c
species: Streptococcus mutans [TaxId: 1309]

Probab=99.40  E-value=4.5e-14  Score=102.27  Aligned_cols=31  Identities=23%  Similarity=0.127  Sum_probs=29.5

Q ss_pred             CCCCHHHHHHHHHHcCCCCCceEEecCccc-c
Q 029593          156 LKPSMDAMKLALHVANVDPRHAVRQSSFLI-F  186 (191)
Q Consensus       156 ~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~-~  186 (191)
                      +||+|.++..+++++|++|++|+||||+++ |
T Consensus       179 gKP~p~~~~~al~~l~i~~~~~~mIGDs~~~D  210 (253)
T d1wvia_         179 GKPEAVIMNKALDRLGVKRHEAIMVGDNYLTD  210 (253)
T ss_dssp             STTSHHHHHHHHHHHTSCGGGEEEEESCTTTT
T ss_pred             ccCCcccceehhhhccccccceEEEcCChHHH
Confidence            599999999999999999999999999976 6

>d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Homoserine kinase ThrH
domain: Homoserine kinase ThrH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.38  E-value=2.2e-12  Score=89.71  Aligned_cols=88  Identities=7%  Similarity=-0.002  Sum_probs=61.3

Q ss_pred             CCCChhHHHHHHhhccCcE--EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q 029593           89 IKPDPQLRNLLCSITQRKI--IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLA  166 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~--i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~  166 (191)
                      ....++....+..+++...  ++|.+...........++....+...........          ......+++......
T Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~----------~~~~~~~~~~~~~~~  137 (206)
T d1rkua_          68 LKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDR----------VVGYQLRQKDPKRQS  137 (206)
T ss_dssp             CCCCTTHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTTSC----------EEEEECCSSSHHHHH
T ss_pred             ccccchHHHHHHHhhcCceEEEeccCchHHHHHHHHHhCCchhhcceeeeecccc----------cccccccchhhHHHH
Confidence            5677888888887766544  8888888888888888877655444332221111          001124445667888


Q ss_pred             HHHcCCCCCceEEecCcccc
Q 029593          167 LHVANVDPRHAVRQSSFLIF  186 (191)
Q Consensus       167 ~~~~~~~p~~~i~iGDs~~~  186 (191)
                      ++.+++++++|++||||.||
T Consensus       138 ~~~~~i~~~eviaiGDg~ND  157 (206)
T d1rkua_         138 VIAFKSLYYRVIAAGDSYND  157 (206)
T ss_dssp             HHHHHHTTCEEEEEECSSTT
T ss_pred             HHHhcccccceEEecCCccC
Confidence            99999999999999999998

>d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative hydrolase EF1188
species: Enterococcus faecalis [TaxId: 1351]

Probab=99.34  E-value=9e-14  Score=100.63  Aligned_cols=31  Identities=16%  Similarity=0.043  Sum_probs=29.3

Q ss_pred             CCCCHHHHHHHHHHcCCCCCceEEecCccc-c
Q 029593          156 LKPSMDAMKLALHVANVDPRHAVRQSSFLI-F  186 (191)
Q Consensus       156 ~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~-~  186 (191)
                      +||+|.++..+++.+|++|++|+||||+++ |
T Consensus       179 ~KP~~~~~~~~~~~~gi~~~~~l~IGD~~~~D  210 (253)
T d1yv9a1         179 GKPKAIIMERAIAHLGVEKEQVIMVGDNYETD  210 (253)
T ss_dssp             STTSHHHHHHHHHHHCSCGGGEEEEESCTTTH
T ss_pred             cccchhHHHHHHHHhCCCccceEEecCChHHH
Confidence            599999999999999999999999999975 6

>d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Hypothetical protein TM1742
species: Thermotoga maritima [TaxId: 2336]

Probab=99.20  E-value=1e-12  Score=95.29  Aligned_cols=31  Identities=13%  Similarity=-0.055  Sum_probs=29.1

Q ss_pred             CCCCHHHHHHHHHHcCCCCCceEEecCccc-c
Q 029593          156 LKPSMDAMKLALHVANVDPRHAVRQSSFLI-F  186 (191)
Q Consensus       156 ~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~-~  186 (191)
                      +||+|.++..+++++|++|++|+||||+++ |
T Consensus       184 ~KP~p~~~~~a~~~l~~~~~~~lmVGD~~~~D  215 (261)
T d1vjra_         184 GKPNPLVVDVISEKFGVPKERMAMVGDRLYTD  215 (261)
T ss_dssp             STTSTHHHHHHHHHHTCCGGGEEEEESCHHHH
T ss_pred             CCCcHHHHHHHHhhhccCchhcceecCChhHH
Confidence            599999999999999999999999999964 6

>d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphoglycolate phosphatase, PGPase
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=99.16  E-value=2.6e-12  Score=91.08  Aligned_cols=31  Identities=3%  Similarity=-0.194  Sum_probs=28.6

Q ss_pred             CCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          157 KPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       157 kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      ..+..+++.+++++|+++++|++||||.||.
T Consensus       150 ~~K~~ai~~l~~~~~i~~~~v~~~GDs~nD~  180 (225)
T d1l6ra_         150 EDKAFAVNKLKEMYSLEYDEILVIGDSNNDM  180 (225)
T ss_dssp             CSHHHHHHHHHHHTTCCGGGEEEECCSGGGH
T ss_pred             cchHHHHHHHhhhhccchhheeeecCCcchH
Confidence            4568999999999999999999999999995

>d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphoglycolate phosphatase, PGPase
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=99.16  E-value=7.8e-11  Score=83.04  Aligned_cols=32  Identities=6%  Similarity=-0.052  Sum_probs=30.1

Q ss_pred             CCCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          156 LKPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       156 ~kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      +.+|+.+++.++++++++|+++++|||+.||.
T Consensus       150 ~~~K~~al~~l~~~~~i~~~~~~~iGD~~NDi  181 (230)
T d1wr8a_         150 WINKGSGIEKASEFLGIKPKEVAHVGDGENDL  181 (230)
T ss_dssp             TCCHHHHHHHHHHHHTSCGGGEEEEECSGGGH
T ss_pred             CcCcchhhcccccccccchhheeeeecCccHH
Confidence            47889999999999999999999999999995

>d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: phosphatase domain of polynucleotide kinase
domain: Polynucleotide kinase, phosphatase domain
species: Bacteriophage T4 [TaxId: 10665]

Probab=99.15  E-value=3e-11  Score=80.02  Aligned_cols=83  Identities=5%  Similarity=-0.126  Sum_probs=52.6

Q ss_pred             CCCChhHHHHHHhhccCcE---EEecCChHH---HHHHHhhcC-----C-CcccceeeecccCCCCCCCCCCCCCCCCCC
Q 029593           89 IKPDPQLRNLLCSITQRKI---IFTNSDRNH---AITCLKRLE-----I-ADCFDQIICFETMNPNLSKATRPDEFPVLL  156 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~~---~~~~l~~~~-----l-~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~  156 (191)
                      ..++|++.++++.|+++|+   ++||.+...   ....++..+     + ...++.........               .
T Consensus        35 ~~~~p~v~~~l~~l~~~G~~Iii~T~R~~~~~~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---------------~   99 (149)
T d1ltqa1          35 DVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVPLVMQCQREQGD---------------T   99 (149)
T ss_dssp             CCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCCCSEEEECCTTC---------------C
T ss_pred             CccCHHHHHHHHHHHhccCeEEEEecCcHHHHHHHHHHHHHHhhhhhhcCCCcEEEeecccccc---------------c
Confidence            4789999999999999997   889876321   222232211     1 11233333332222               2


Q ss_pred             CCCHHHHHHHHHHcCCCCCc-eEEecCcccc
Q 029593          157 KPSMDAMKLALHVANVDPRH-AVRQSSFLIF  186 (191)
Q Consensus       157 kp~~~~~~~~~~~~~~~p~~-~i~iGDs~~~  186 (191)
                      +|+......++..+...+.+ +++|||+..|
T Consensus       100 ~~d~~~k~~~l~~~~~~~~~i~~~igD~~~d  130 (149)
T d1ltqa1         100 RKDDVVKEEIFWKHIAPHFDVKLAIDDRTQV  130 (149)
T ss_dssp             SCHHHHHHHHHHHHTTTTCEEEEEEECCHHH
T ss_pred             CCchHHHHHHHHHhccCCCceEEEEcCCHHH
Confidence            67778888888887776655 4678999865

>d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein MW1667 (SA1546)
domain: Hypothetical protein MW1667 (SA1546)
species: Staphylococcus aureus [TaxId: 1280]

Probab=99.14  E-value=5.2e-11  Score=90.77  Aligned_cols=96  Identities=16%  Similarity=0.105  Sum_probs=72.3

Q ss_pred             CCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccce--eeecccCCCCCCCCCCCCCCCCCCCCCHHHH
Q 029593           89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQ--IICFETMNPNLSKATRPDEFPVLLKPSMDAM  163 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~--i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~  163 (191)
                      +.|.+++.++|+.|+++|+   ++||.+...++..++++|+..+|+.  ++++++....   ..........+||+|.++
T Consensus       214 i~p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a~~il~~lgl~~~F~~~~i~~~~d~~~~---~~~~~~~~~~~KP~p~~~  290 (380)
T d1qyia_         214 LRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEA---ENMYPQARPLGKPNPFSY  290 (380)
T ss_dssp             SSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEECHHHHHHH---HHHSTTSCCCCTTSTHHH
T ss_pred             ccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcccCCcceEEecchhhhh---hhhccccccccCCChHHH
Confidence            5678899999999999998   9999999999999999999999875  4443331000   000001222369999999


Q ss_pred             HHHHHHc--------------CCCCCceEEecCccccc
Q 029593          164 KLALHVA--------------NVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       164 ~~~~~~~--------------~~~p~~~i~iGDs~~~~  187 (191)
                      ..++..+              +..|++|+|||||.||-
T Consensus       291 ~~~~~~~~~~~~~k~~iv~~~~~~~~~~~~vGD~~~D~  328 (380)
T d1qyia_         291 IAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADL  328 (380)
T ss_dssp             HHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHH
T ss_pred             HHHHHHcCCCHHHHHHHHHHhCCCCCeEEEECCCHHHH
Confidence            9988654              56789999999999984

>d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YidA
species: Escherichia coli [TaxId: 562]

Probab=98.96  E-value=1.1e-09  Score=79.20  Aligned_cols=30  Identities=10%  Similarity=-0.027  Sum_probs=27.8

Q ss_pred             CCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          158 PSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       158 p~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      .|..+++.+++.++++++++++||||.||.
T Consensus       197 ~K~~al~~l~~~~~i~~~~ii~~GD~~ND~  226 (271)
T d1rkqa_         197 NKGTGVKSLADVLGIKPEEIMAIGDQENDI  226 (271)
T ss_dssp             SHHHHHHHHHHHHTCCGGGEEEEECSGGGH
T ss_pred             CcccccceehhhcccchhcEEEEeCcHhHH
Confidence            367899999999999999999999999994

>d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Pyrimidine 5'-nucleotidase (UMPH-1)
domain: Cytosolic 5'-nucleotidase III
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.95  E-value=3.1e-09  Score=77.60  Aligned_cols=111  Identities=10%  Similarity=0.021  Sum_probs=66.7

Q ss_pred             CCCccchhhhhhcCCCCCCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeee----cccCCCC
Q 029593           70 DIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIIC----FETMNPN  142 (191)
Q Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~----~~~~~~~  142 (191)
                      .+..+.+...+.+    +.+.+.||+.+++..|+++|+   |+|+|....++.+++++|+...--.+++    .++.+..
T Consensus       119 ~l~~~~i~~~v~~----~~i~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~~ni~I~sN~l~f~~~~~~  194 (291)
T d2bdua1         119 GIPKAKLKEIVAD----SDVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFDENGVL  194 (291)
T ss_dssp             CCBGGGHHHHHHH----SCCCBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCBTTEEEEEECEEECTTSBE
T ss_pred             CCCHHHHHHHHHh----cCCCcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHcCCCccCceEEeeEEEEeCCeeE
Confidence            3444555555543    236899999999999999987   9999999999999999987532111221    1111100


Q ss_pred             CCCCCCCCCCCCCCCCCHHHHHHHHHHcC--CCCCceEEecCcccccc
Q 029593          143 LSKATRPDEFPVLLKPSMDAMKLALHVAN--VDPRHAVRQSSFLIFYF  188 (191)
Q Consensus       143 ~~~~~~~~~~~~~~kp~~~~~~~~~~~~~--~~p~~~i~iGDs~~~~~  188 (191)
                        ...  ..+......+..........+.  -...+++++|||.||..
T Consensus       195 --~~~--~~~~i~~~~K~~~~~~~~~~~~~~~~~~~vI~iGDs~~Dl~  238 (291)
T d2bdua1         195 --KGF--KGELIHVFNKHDGALKNTDYFSQLKDNSNIILLGDSQGDLR  238 (291)
T ss_dssp             --EEE--CSSCCCTTCHHHHHHTTHHHHHHTTTCCEEEEEESSSGGGG
T ss_pred             --eec--cCCccccccCcchhhhhHHHHhccCCcCcEEEEeCCHhHHH
Confidence              000  0011112223344444444333  35688999999999974

>d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YwpJ
species: Bacillus subtilis [TaxId: 1423]

Probab=98.95  E-value=2.5e-10  Score=83.13  Aligned_cols=30  Identities=13%  Similarity=-0.046  Sum_probs=28.3

Q ss_pred             CCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          158 PSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       158 p~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      .|..+++.+++.+|++++++++||||.||.
T Consensus       213 ~K~~ai~~l~~~~gi~~~~vi~~GD~~ND~  242 (285)
T d1nrwa_         213 SKGQALKRLAKQLNIPLEETAAVGDSLNDK  242 (285)
T ss_dssp             SHHHHHHHHHHHTTCCGGGEEEEESSGGGH
T ss_pred             hhhhHHHHHHhhcccCcccEEEEeCCHHHH
Confidence            568999999999999999999999999995

>d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein TM0651
species: Thermotoga maritima [TaxId: 2336]

Probab=98.83  E-value=1.4e-09  Score=78.53  Aligned_cols=31  Identities=10%  Similarity=-0.142  Sum_probs=28.8

Q ss_pred             CCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          157 KPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       157 kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      -.|..+++.++++++++++++++||||.||.
T Consensus       189 ~~K~~ai~~l~~~~~i~~~~vva~GD~~ND~  219 (267)
T d1nf2a_         189 VDKGKALRFLRERMNWKKEEIVVFGDNENDL  219 (267)
T ss_dssp             CCHHHHHHHHHHHHTCCGGGEEEEECSHHHH
T ss_pred             CchhHHHHHHHHhhccCcccEEEEcCCcchH
Confidence            4568999999999999999999999999995

>d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sugar phosphatase SupH (YbiV)
species: Escherichia coli [TaxId: 562]

Probab=98.75  E-value=4.7e-09  Score=75.66  Aligned_cols=30  Identities=10%  Similarity=-0.006  Sum_probs=28.1

Q ss_pred             CCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          158 PSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       158 p~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      .|..+++.+++++|++++++++||||.||.
T Consensus       190 sK~~al~~l~~~lgi~~~~vi~~GD~~ND~  219 (269)
T d1rlma_         190 HKANGISRLLKRWDLSPQNVVAIGDSGNDA  219 (269)
T ss_dssp             SHHHHHHHHHHHHTCCGGGEEEEECSGGGH
T ss_pred             HHHHHHHHHhhhhccccccEEEEcCCcchH
Confidence            468999999999999999999999999995

>d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: phosphatase domain of polynucleotide kinase
domain: 5' polynucleotide kinase-3' phosphatase, middle domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.68  E-value=2.1e-08  Score=68.85  Aligned_cols=78  Identities=18%  Similarity=0.194  Sum_probs=54.8

Q ss_pred             CChhHHHHHHhhccCcE---EEecCC--------hHH----HHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCC
Q 029593           91 PDPQLRNLLCSITQRKI---IFTNSD--------RNH----AITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVL  155 (191)
Q Consensus        91 ~~~~~~~~l~~l~~~g~---i~t~~~--------~~~----~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~  155 (191)
                      .+|++.+.+..|+++|+   |+||.+        .+.    ....++.++..  +...++..              ....
T Consensus        51 l~~~v~~~i~~L~~~gy~iiIvTNQ~gI~rg~~s~~~~~~~~~~i~~~l~~~--~~i~~~~~--------------~~~~  114 (195)
T d1yj5a1          51 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVP--FQVLVATH--------------AGLN  114 (195)
T ss_dssp             SCTTHHHHHHHHHHHTCEEEEEEECHHHHHTSSCHHHHHHHHHHHHHHHTSC--CEEEEECS--------------SSSS
T ss_pred             ccCCHHHHHHHHHhCCcEEEEecCcchhccCCcCHHHHHHHHHHHHHHcCCC--ccEEEecC--------------cccc
Confidence            47999999999999886   889953        222    33344555543  23333322              1224


Q ss_pred             CCCCHHHHHHHHHHcC----CCCCceEEecCcc
Q 029593          156 LKPSMDAMKLALHVAN----VDPRHAVRQSSFL  184 (191)
Q Consensus       156 ~kp~~~~~~~~~~~~~----~~p~~~i~iGDs~  184 (191)
                      .||++.|+..++++++    ++.++++||||..
T Consensus       115 RKP~~GM~~~~~~~~n~~~~id~~~S~~IGD~~  147 (195)
T d1yj5a1         115 RKPVSGMWDHLQEQANEGIPISVEDSVFVGDAA  147 (195)
T ss_dssp             STTSTHHHHHHHHTSSSSCCCCGGGCEEECSCC
T ss_pred             CCCccHHHHHHHHHhcccccCCcCceEEEeCcc
Confidence            6999999999999985    8889999999954

>d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: PFL1270w orthologue
species: Plasmodium vivax [TaxId: 5855]

Probab=98.66  E-value=1.7e-08  Score=72.89  Aligned_cols=31  Identities=6%  Similarity=-0.036  Sum_probs=28.7

Q ss_pred             CCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          157 KPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       157 kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      ..+..+++.+++.++++++++++||||.||.
T Consensus       206 ~~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~  236 (283)
T d2b30a1         206 HDKYTGINYLLKHYNISNDQVLVVGDAENDI  236 (283)
T ss_dssp             CCHHHHHHHHHHHTTCCGGGEEEEECSGGGH
T ss_pred             chhHHHHHHHhhhcccccceEEEecCChhhH
Confidence            5568999999999999999999999999995

>d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sugar-phosphate phosphatase BT4131
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=98.56  E-value=2.7e-08  Score=71.36  Aligned_cols=31  Identities=0%  Similarity=-0.165  Sum_probs=28.7

Q ss_pred             CCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          157 KPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       157 kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      -.|..+++.+++++|++++++++||||.||.
T Consensus       185 ~sK~~al~~l~~~~~i~~~~~~a~GD~~ND~  215 (260)
T d2rbka1         185 DTKQKGIDEIIRHFGIKLEETMSFGDGGNDI  215 (260)
T ss_dssp             CSHHHHHHHHHHHHTCCGGGEEEEECSGGGH
T ss_pred             CCHHHHHHHHHHhccccHhheeEecCCcccH
Confidence            4568999999999999999999999999995

>d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=98.48  E-value=1.7e-07  Score=65.96  Aligned_cols=32  Identities=9%  Similarity=-0.038  Sum_probs=27.6

Q ss_pred             CCCCHHHHHHHHHHc-CCCCCceEEecCccccc
Q 029593          156 LKPSMDAMKLALHVA-NVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       156 ~kp~~~~~~~~~~~~-~~~p~~~i~iGDs~~~~  187 (191)
                      +-.|..++..+++++ ++.++++++||||.||.
T Consensus       177 ~~~K~~al~~l~~~~~~~~~~~~~a~GD~~ND~  209 (243)
T d1wzca1         177 NSDKGKAAKILLDFYKRLGQIESYAVGDSYNDF  209 (243)
T ss_dssp             SCCHHHHHHHHHHHHHTTSCEEEEEEECSGGGH
T ss_pred             hhccHHHHHHHHHHhcCCCcccEEEEcCCHhHH
Confidence            344688999999998 48999999999999994

>d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP)
species: Escherichia coli [TaxId: 562]

Probab=98.45  E-value=2.4e-07  Score=64.62  Aligned_cols=31  Identities=3%  Similarity=-0.255  Sum_probs=25.6

Q ss_pred             CCCHHHHHHHHH---HcCCCCCceEEecCccccc
Q 029593          157 KPSMDAMKLALH---VANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       157 kp~~~~~~~~~~---~~~~~p~~~i~iGDs~~~~  187 (191)
                      -.|..+.+.+++   ++|++++++++||||.||.
T Consensus       183 ~~K~~~~~~l~~~~~~l~i~~~~~iafGD~~NDl  216 (232)
T d1xvia_         183 AGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDA  216 (232)
T ss_dssp             CCHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGH
T ss_pred             chHHHHHHHHHHHHHHcCCChhcEEEEcCCHhHH
Confidence            455777777776   4689999999999999995

>d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sucrose-phosphatase Slr0953
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=98.45  E-value=1.9e-07  Score=66.06  Aligned_cols=31  Identities=6%  Similarity=-0.075  Sum_probs=28.6

Q ss_pred             CCCHHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          157 KPSMDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       157 kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      ..|..+++.+++.+|++++++++||||.||.
T Consensus       161 ~~K~~a~~~l~~~~gi~~~~~v~~GD~~ND~  191 (244)
T d1s2oa1         161 SNKGNATQYLQQHLAMEPSQTLVCGDSGNDI  191 (244)
T ss_dssp             CSHHHHHHHHHHHTTCCGGGEEEEECSGGGH
T ss_pred             cchhHHHHHHHHhccCChhhEEEEcCCCCCH
Confidence            4568999999999999999999999999995

>d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Class B acid phosphatase, AphA
domain: Class B acid phosphatase, AphA
species: Escherichia coli [TaxId: 562]

Probab=98.31  E-value=2.5e-07  Score=63.66  Aligned_cols=76  Identities=13%  Similarity=0.024  Sum_probs=49.3

Q ss_pred             CCCChhHHHHHHhhccCcE---EEecCChH---HHHHHH-hhcCCC--cccceeeecccCCCCCCCCCCCCCCCCCCCCC
Q 029593           89 IKPDPQLRNLLCSITQRKI---IFTNSDRN---HAITCL-KRLEIA--DCFDQIICFETMNPNLSKATRPDEFPVLLKPS  159 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~---i~t~~~~~---~~~~~l-~~~~l~--~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~  159 (191)
                      ..+.||++++++.++++|+   .+||....   .+..-+ +.+|+.  ...+.++....-.                |. 
T Consensus        85 A~p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~~~~vll~~~~~~----------------K~-  147 (209)
T d2b82a1          85 SIPKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMNPVIFAGDKPG----------------QN-  147 (209)
T ss_dssp             CEECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTBCCCEECCCCTT----------------CC-
T ss_pred             cCcchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCcccccceEeeCCCCC----------------ch-
Confidence            4578999999999999997   88987542   344444 457774  3334445443211                22 


Q ss_pred             HHHHHHHHHHcCCCCCceEEecCccccc
Q 029593          160 MDAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       160 ~~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                        .-+..++++++    ++++||+.+|+
T Consensus       148 --~rr~~Ik~y~I----~l~~GD~l~Df  169 (209)
T d2b82a1         148 --TKSQWLQDKNI----RIFYGDSDNDI  169 (209)
T ss_dssp             --CSHHHHHHTTE----EEEEESSHHHH
T ss_pred             --HHHHHHHHcCe----EEEecCCHHHH
Confidence              13333356666    88999999997

>d2bdea1 c.108.1.23 (A:2-459) Cytosolic IMP-GMP specific 5'-nucleotidase {Legionella pneumophila [TaxId: 446]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: 5' nucleotidase-like
domain: Cytosolic IMP-GMP specific 5'-nucleotidase
species: Legionella pneumophila [TaxId: 446]

Probab=98.07  E-value=1.6e-05  Score=60.75  Aligned_cols=98  Identities=12%  Similarity=0.036  Sum_probs=62.3

Q ss_pred             CCCCCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhc---------CCCcccceeeecccCCC-----CCC-----
Q 029593           87 DLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRL---------EIADCFDQIICFETMNP-----NLS-----  144 (191)
Q Consensus        87 ~~~~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~---------~l~~~f~~i~~~~~~~~-----~~~-----  144 (191)
                      ..+...|.+...|..|+++|.   ++||++..++...++.+         ...++||.|+.......     .++     
T Consensus       182 kYv~k~~~l~~~L~~lr~~GKklFLiTNS~~~y~~~~m~y~~~~~~~~g~dWr~lFDvVIv~A~KP~FF~~~~~~~~v~~  261 (458)
T d2bdea1         182 KYVIREKEVVEGLKHFIRYGKKIFILTNSEYSYSKLLLDYALSPFLDKGEHWQGLFEFVITLANKPRFFYDNLRFLSVNP  261 (458)
T ss_dssp             TSEECCHHHHHHHHHHHTTTCEEEEECSSCHHHHHHHHHHHHGGGSCTTCCGGGTEEEEEESCCHHHHHHSCCCEEEECT
T ss_pred             HhhcCChhHHHHHHHHHHcCCeEEEEecCcHHHHHHHhhhhcccCCCCCCChHHhceEEEeCCCCCCccCCCCcceEEeC
Confidence            345668999999999999885   99999999988887763         34568999876421000     000     


Q ss_pred             -CCCCCCCCCCCCCCC---HHHHHHHHHHcCCCCCceEEecCccc
Q 029593          145 -KATRPDEFPVLLKPS---MDAMKLALHVANVDPRHAVRQSSFLI  185 (191)
Q Consensus       145 -~~~~~~~~~~~~kp~---~~~~~~~~~~~~~~p~~~i~iGDs~~  185 (191)
                       ++... .....-||.   ..-...+.+.+|....+|++|||++.
T Consensus       262 ~~g~l~-~~~~~~~~~vY~gGn~~~l~~llg~~g~~VLY~GDhi~  305 (458)
T d2bdea1         262 ENGTMT-NVHGPIVPGVYQGGNAKKFTEDLGVGGDEILYIGDHIY  305 (458)
T ss_dssp             TTCCEE-ECCSCCCSEEEEECCHHHHHHHTTCCGGGEEEEESSCC
T ss_pred             CCCccc-cCCccccCCccccCCHHHHHHHhCCCCCcEEEECCccc
Confidence             00000 000001111   22356677788999999999999863

>d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Meta-cation ATPase, catalytic domain P
domain: Cation-transporting ATPase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.03  E-value=9.2e-06  Score=52.10  Aligned_cols=72  Identities=7%  Similarity=-0.054  Sum_probs=54.0

Q ss_pred             CCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q 029593           90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLA  166 (191)
Q Consensus        90 ~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~  166 (191)
                      ++.|++.+.++.|++.|+   ++|+.+...++.+.+.+|+...    ++..                   .  |.--..+
T Consensus        21 ~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI~~v----~~~~-------------------~--p~~k~~~   75 (135)
T d2b8ea1          21 TLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLV----IAEV-------------------L--PHQKSEE   75 (135)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEE----ECSC-------------------C--HHHHHHH
T ss_pred             CCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhhhhhhh----cccc-------------------c--hhHHHHH
Confidence            578999999999999998   9998888899999999998543    3211                   1  3333344


Q ss_pred             HHHcCCCCCceEEecCccccc
Q 029593          167 LHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       167 ~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      .+.++-. ..+.|+||+.||-
T Consensus        76 v~~~q~~-~~v~~vGDg~nD~   95 (135)
T d2b8ea1          76 VKKLQAK-EVVAFVGDGINDA   95 (135)
T ss_dssp             HHHHTTT-SCEEEEECSSSSH
T ss_pred             HHHHHcC-CEEEEEeCCCCcH
Confidence            4444443 6899999999984

>d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Probable phosphatase YrbI
domain: Probable phosphatase YrbI
species: Haemophilus influenzae, HI1679 [TaxId: 727]

Probab=97.97  E-value=6.7e-06  Score=55.31  Aligned_cols=67  Identities=10%  Similarity=-0.048  Sum_probs=53.9

Q ss_pred             HHHhhccCcE---EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHcCCCC
Q 029593           98 LLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDP  174 (191)
Q Consensus        98 ~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~p  174 (191)
                      .+..|++.|+   ++|......+....+.+++..    ++..                   .+++...++.++++++++|
T Consensus        40 gi~~l~~~gi~~~iis~~~~~~v~~~~~~l~~~~----~~~~-------------------~~~K~~~l~~~~~~~~i~~   96 (177)
T d1k1ea_          40 GIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL----FFLG-------------------KLEKETACFDLMKQAGVTA   96 (177)
T ss_dssp             HHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE----EEES-------------------CSCHHHHHHHHHHHHTCCG
T ss_pred             HHHHHhhhcEEEEEecCCchhHHHHHHhhhcccc----cccc-------------------cccHHHHHHHHHHHhcCCc
Confidence            4677777777   888888888888888877733    2221                   2667889999999999999


Q ss_pred             CceEEecCccccc
Q 029593          175 RHAVRQSSFLIFY  187 (191)
Q Consensus       175 ~~~i~iGDs~~~~  187 (191)
                      ++|++|||+.||.
T Consensus        97 ~~v~~vGDd~nDl  109 (177)
T d1k1ea_          97 EQTAYIGDDSVDL  109 (177)
T ss_dssp             GGEEEEECSGGGH
T ss_pred             ceeEEecCCccHH
Confidence            9999999999984

>d1q92a_ c.108.1.8 (A:) 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: 5'(3')-deoxyribonucleotidase (dNT-2)
domain: 5'(3')-deoxyribonucleotidase (dNT-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.84  E-value=1.2e-05  Score=54.73  Aligned_cols=27  Identities=15%  Similarity=0.098  Sum_probs=20.9

Q ss_pred             CCCCCChhHHHHHHhhccCc-E---EEecCC
Q 029593           87 DLIKPDPQLRNLLCSITQRK-I---IFTNSD  113 (191)
Q Consensus        87 ~~~~~~~~~~~~l~~l~~~g-~---i~t~~~  113 (191)
                      ..++|.||+.+++..|++.| .   ++|...
T Consensus        71 ~~L~p~~gA~e~l~~L~~~~~~~v~i~t~~~  101 (195)
T d1q92a_          71 FELEPLPGAVEAVKEMASLQNTDVFICTSPI  101 (195)
T ss_dssp             TTCCBCTTHHHHHHHHHHSTTEEEEEEECCC
T ss_pred             hhCCcccCHHHHHHHHhhccCccceEEcccc
Confidence            44799999999999998743 2   667654

>d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein VC0232
domain: Hypothetical protein VC0232
species: Vibrio cholerae [TaxId: 666]

Probab=97.59  E-value=7.3e-05  Score=46.88  Aligned_cols=45  Identities=18%  Similarity=0.241  Sum_probs=33.3

Q ss_pred             CCCChhHHHHHHhhccCcE---EEecCC---------------hHHHHHHHhhcCCCcccceeee
Q 029593           89 IKPDPQLRNLLCSITQRKI---IFTNSD---------------RNHAITCLKRLEIADCFDQIIC  135 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~---i~t~~~---------------~~~~~~~l~~~~l~~~f~~i~~  135 (191)
                      ..|.+++.+.+..|++.|.   +.|...               .+.+...|+..|+ . +|.++-
T Consensus        23 ~~P~~~~Ie~l~~l~~~G~~Iii~TaR~~~~~~~~~~~~~~~~~~~T~~wL~~~gI-~-Yd~Li~   85 (124)
T d1xpja_          23 VLPRLDVIEQLREYHQLGFEIVISTARNMRTYEGNVGKINIHTLPIITEWLDKHQV-P-YDEILV   85 (124)
T ss_dssp             CCBCHHHHHHHHHHHHTTCEEEEEECTTTTTTTTCHHHHHHHTHHHHHHHHHHTTC-C-CSEEEE
T ss_pred             cCcCHHHHHHHHHHHHCCCEEEEEecCCccccCCcHHHHHHHHHHHHHHHHHHcCC-C-ceEEEE
Confidence            4789999999999999986   666653               2457778888888 3 455544

>d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Meta-cation ATPase, catalytic domain P
domain: Calcium ATPase, catalytic domain P
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=97.58  E-value=9.9e-05  Score=48.93  Aligned_cols=98  Identities=7%  Similarity=-0.026  Sum_probs=57.1

Q ss_pred             CCChhHHHHHHhhccCcE---EEecCChHHHHHHHhhcCCCccccee----eecccCCCCCCCC--CCCCCCCCCCCCCH
Q 029593           90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQI----ICFETMNPNLSKA--TRPDEFPVLLKPSM  160 (191)
Q Consensus        90 ~~~~~~~~~l~~l~~~g~---i~t~~~~~~~~~~l~~~~l~~~f~~i----~~~~~~~~~~~~~--~~~~~~~~~~kp~~  160 (191)
                      ++.+++.++++.|++.|+   ++|+-+...+..+.+.+|+...-..+    ..++.........  .+.....+...-.|
T Consensus        20 p~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~p   99 (168)
T d1wpga2          20 PPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVEP   99 (168)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSCTTCCCTTTEEEHHHHHHSCHHHHHHHHHHCCEEESCCH
T ss_pred             CCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHcCCCCCccccccccccccccchhhHHHHhhhhhhhhhhhccch
Confidence            678999999999999998   99998999999999999985322111    1100000000000  00000000012234


Q ss_pred             HHHHHHHHHcCCCCCceEEecCccccc
Q 029593          161 DAMKLALHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       161 ~~~~~~~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      .--..+.+.++-.-..+.|+||+.||-
T Consensus       100 ~~K~~lv~~l~~~g~~Va~vGDG~nD~  126 (168)
T d1wpga2         100 SHKSKIVEYLQSYDEITAMTGDGVNDA  126 (168)
T ss_dssp             HHHHHHHHHHHHTTCCEEEEECSGGGH
T ss_pred             hHHHHHHHHHHhcccceeEEecCCCCH
Confidence            444444444444457899999999984

>d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphomannomutase 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.39  E-value=2.5e-05  Score=54.23  Aligned_cols=30  Identities=20%  Similarity=0.249  Sum_probs=24.2

Q ss_pred             CceEEEEecCCCCCCChHHHHHHHHHHHHH
Q 029593            4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEG   33 (191)
Q Consensus         4 ~~k~iifD~DGTL~~~~~~~~~~~~~~~~~   33 (191)
                      ..|+++||+||||++.+..+.....+++++
T Consensus         2 ~~kl~~fDlDGTLl~~~~~i~~~~~~al~~   31 (243)
T d2amya1           2 GPALCLFDVDGTLTAPRQKITKEMDDFLQK   31 (243)
T ss_dssp             CSEEEEEESBTTTBCTTSCCCHHHHHHHHH
T ss_pred             CCEEEEEcCcCCeeCCCCcCCHHHHHHHHH
Confidence            579999999999999876666666666655

>d1ta0a_ c.108.1.16 (A:) Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NLI interacting factor-like phosphatase
domain: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.35  E-value=1.1e-05  Score=54.46  Aligned_cols=82  Identities=16%  Similarity=0.105  Sum_probs=59.1

Q ss_pred             CCCChhHHHHHHhhccC-cE-EEecCChHHHHHHHhhcCCCcccceeeecccCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q 029593           89 IKPDPQLRNLLCSITQR-KI-IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLA  166 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~-g~-i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~  166 (191)
                      +...||+.++|+.+.+. .+ |.|.+...++..+++.+.-...+......+.-...              ++   .+.+-
T Consensus        54 v~~RP~l~eFL~~l~~~yei~I~Ta~~~~YA~~il~~ldp~~~~~~~~~r~~c~~~--------------~~---~~~Kd  116 (181)
T d1ta0a_          54 VLKRPHVDEFLQRMGELFECVLFTASLAKYADPVADLLDKWGAFRARLFRESCVFH--------------RG---NYVKD  116 (181)
T ss_dssp             EEECTTHHHHHHHHHHHSEEEEECSSCHHHHHHHHHHHCSSCCEEEEECGGGSEEE--------------TT---EEECC
T ss_pred             EecCCCHHHHHHHHHhceEEEEEcCCcHHHHHHHHHHhccCCceeEEEEeeeeeec--------------CC---ccccc
Confidence            56799999999999875 34 99999999999999998776666665544332210              11   11233


Q ss_pred             HHHcCCCCCceEEecCccccc
Q 029593          167 LHVANVDPRHAVRQSSFLIFY  187 (191)
Q Consensus       167 ~~~~~~~p~~~i~iGDs~~~~  187 (191)
                      ++.+|-+.+++++|.|++.-+
T Consensus       117 L~~l~~~l~~vvivDd~~~~~  137 (181)
T d1ta0a_         117 LSRLGRDLRRVLILDNSPASY  137 (181)
T ss_dssp             GGGSCSCGGGEEEECSCGGGG
T ss_pred             HhhcCCCHHHeEEEcCChhhh
Confidence            456677889999999988654

>d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphomannomutase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.69  E-value=0.00022  Score=49.07  Aligned_cols=28  Identities=0%  Similarity=-0.382  Sum_probs=22.0

Q ss_pred             CCCHHHHHHHHHHcCCCCCceEEecCcc----ccc
Q 029593          157 KPSMDAMKLALHVANVDPRHAVRQSSFL----IFY  187 (191)
Q Consensus       157 kp~~~~~~~~~~~~~~~p~~~i~iGDs~----~~~  187 (191)
                      -.|..+++.+++   .+++++++|||+.    ||.
T Consensus       184 vsKg~al~~L~~---~~~~ev~afGD~~~~G~ND~  215 (244)
T d2fuea1         184 WDKRYCLDSLDQ---DSFDTIHFFGNETSPGGNDF  215 (244)
T ss_dssp             CSTTHHHHHHTT---SCCSEEEEEESCCSTTSTTH
T ss_pred             ccHHHHHHHHhc---CChhhEEEEcCCCCCCCCcH
Confidence            445688888764   5899999999975    984

>d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: AF1437-like
domain: Hypothetical protein AF1437
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.59  E-value=0.027  Score=38.89  Aligned_cols=39  Identities=10%  Similarity=0.123  Sum_probs=33.9

Q ss_pred             CCCChhHHHHHHhhccCcE--EEecCChHHHHHHHhhcCCC
Q 029593           89 IKPDPQLRNLLCSITQRKI--IFTNSDRNHAITCLKRLEIA  127 (191)
Q Consensus        89 ~~~~~~~~~~l~~l~~~g~--i~t~~~~~~~~~~l~~~~l~  127 (191)
                      +.+.||+.++++.+.+.=.  |+|.+...+++...+..|+.
T Consensus        80 ~~lvpgA~~~lk~l~~~m~~yIvSTSY~qyi~al~~~~gfp  120 (308)
T d1y8aa1          80 AKFVPDAEKAMATLQERWTPVVISTSYTQYLRRTASMIGVR  120 (308)
T ss_dssp             CCBCTTHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCC
T ss_pred             eeecCCHHHHHHHHHhhCCcEEEeccHHHHHHHHHhhcCCC
Confidence            7899999999999987643  99999999999999988774

>d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: BT0820-like
domain: Hypothetical protein BT0820
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=96.22  E-value=0.0037  Score=38.72  Aligned_cols=37  Identities=16%  Similarity=0.148  Sum_probs=26.7

Q ss_pred             CCChhHHHHHHhhccCcE---EEecCChHH---HHHHHhhcCC
Q 029593           90 KPDPQLRNLLCSITQRKI---IFTNSDRNH---AITCLKRLEI  126 (191)
Q Consensus        90 ~~~~~~~~~l~~l~~~g~---i~t~~~~~~---~~~~l~~~~l  126 (191)
                      .|.|++.+.+..|+++|.   +.|......   ....++..++
T Consensus        21 kPi~~~Ie~l~~L~~~G~~IIi~TaR~~~~~~~t~~wL~~~~i   63 (122)
T d2obba1          21 EEIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGL   63 (122)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTC
T ss_pred             cccHHHHHHHHHHHHCCCeEEEEecCCCcchHHHHHHHHHcCC
Confidence            578999999999999886   666655433   4455666555

>d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Trehalose-phosphatase
domain: Trehalose-6-phosphate phosphatase related protein
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=95.68  E-value=0.0012  Score=44.88  Aligned_cols=25  Identities=12%  Similarity=-0.114  Sum_probs=20.3

Q ss_pred             CCCHHHHHHHHHHcCCCCCceEEecCcccc
Q 029593          157 KPSMDAMKLALHVANVDPRHAVRQSSFLIF  186 (191)
Q Consensus       157 kp~~~~~~~~~~~~~~~p~~~i~iGDs~~~  186 (191)
                      -.|..+++.++++     +++++||||.||
T Consensus       158 ~~Kg~al~~l~~~-----~~~i~~GDs~ND  182 (229)
T d1u02a_         158 VNKGSAIRSVRGE-----RPAIIAGDDATD  182 (229)
T ss_dssp             CCHHHHHHHHHTT-----SCEEEEESSHHH
T ss_pred             CCHHHHHHHHhcc-----ccceeecCCCCh
Confidence            4457888888753     789999999998

>d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Probable phosphatase YrbI
domain: Probable phosphatase YrbI
species: Haemophilus influenzae, HI1679 [TaxId: 727]

Probab=94.24  E-value=0.0093  Score=39.40  Aligned_cols=17  Identities=18%  Similarity=0.346  Sum_probs=15.1

Q ss_pred             CceEEEEecCCCCCCCh
Q 029593            4 PFNCLVFDLDDTLYPSE   20 (191)
Q Consensus         4 ~~k~iifD~DGTL~~~~   20 (191)
                      .+|+++||+||||+|..
T Consensus         4 ~ik~~i~DvDGVlTDG~   20 (177)
T d1k1ea_           4 NIKFVITDVDGVLTDGQ   20 (177)
T ss_dssp             GCCEEEEECTTTTSCSE
T ss_pred             cCeEEEEccCCcccCCe
Confidence            58999999999999863

>d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein MW1667 (SA1546)
domain: Hypothetical protein MW1667 (SA1546)
species: Staphylococcus aureus [TaxId: 1280]

Probab=92.77  E-value=0.027  Score=41.70  Aligned_cols=20  Identities=20%  Similarity=0.454  Sum_probs=17.1

Q ss_pred             ceEEEEecCCCCCCChHHHH
Q 029593            5 FNCLVFDLDDTLYPSETGIA   24 (191)
Q Consensus         5 ~k~iifD~DGTL~~~~~~~~   24 (191)
                      +|.|+|||||+|++.+..+.
T Consensus         1 ~~~i~fd~dGVll~~~~~~D   20 (380)
T d1qyia_           1 MKKILFDVDGVFLSEERCFD   20 (380)
T ss_dssp             CCEEEECSBTTTBCSHHHHH
T ss_pred             CceEEEeCCcEEEcceeecc
Confidence            47899999999999987654

>d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Trehalose-phosphatase
domain: Trehalose-6-phosphate phosphatase related protein
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=86.69  E-value=0.13  Score=34.20  Aligned_cols=27  Identities=30%  Similarity=0.345  Sum_probs=17.5

Q ss_pred             EEEEecCCCCCCC-----hHHHHHHHHHHHHH
Q 029593            7 CLVFDLDDTLYPS-----ETGIAAAVKRNIEG   33 (191)
Q Consensus         7 ~iifD~DGTL~~~-----~~~~~~~~~~~~~~   33 (191)
                      .|+||+||||++.     ...+.....+++++
T Consensus         2 Li~~DlDGTL~~~~~~~~~~~i~~~~~~~l~~   33 (229)
T d1u02a_           2 LIFLDYDGTLVPIIMNPEESYADAGLLSLISD   33 (229)
T ss_dssp             EEEEECBTTTBCCCSCGGGCCCCHHHHHHHHH
T ss_pred             EEEEEecCCCCCCCCChhhCCCCHHHHHHHHH
Confidence            6899999999973     21244455555544

>d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphomannomutase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.69  E-value=0.21  Score=33.17  Aligned_cols=26  Identities=31%  Similarity=0.487  Sum_probs=19.5

Q ss_pred             EEEecCCCCCCChHHHHHHHHHHHHH
Q 029593            8 LVFDLDDTLYPSETGIAAAVKRNIEG   33 (191)
Q Consensus         8 iifD~DGTL~~~~~~~~~~~~~~~~~   33 (191)
                      ++||+||||++.+..+.....+++++
T Consensus         4 ~lFDlDGTLl~~~~~is~~~~~~i~~   29 (244)
T d2fuea1           4 CLFDVDGTLTPARQKIDPEVAAFLQK   29 (244)
T ss_dssp             EEEESBTTTBSTTSCCCHHHHHHHHH
T ss_pred             EEEccccCccCCCCcCCHHHHHHHHH
Confidence            44799999999887666666666655