Citrus Sinensis ID: 029596

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-
Protein Sequence
MFTTKKKIQKDKDAEPTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQRPRSRTLTAVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRKLTGKDVVFDYPITDA
Secondary Structure (PSIPRED)
cccccccccccccccccHHHHHHHHHHHccccccHHHHHccccEEEEEEEEEEEcccEEEEEEEEEcHHHHHHHHHHHHHHHHHHHHcccccEEEEEEccccccccccccccccccccHHHHHHHHHHHcccccEEEEEEEEEEccccEEEEEEEcccccccHHHHHHHHHHHHHHHccccEEEEcccccc
Secondary Structure Prediction (SSPRO)
cccHHHHEEccccccccHHHHHHHHHHHHHHHccHHHHHHHHHcEEEcEEEEEEccccEEEEEEEcHHHHHHHHHHHHHHHHHHHHHccccEEEEEEEEEEcccccccccccccccHHHHHHHHHHHHHcccccHEcccEEEEEEcccEEEEEEEcHHHcccHHHHHHHHHHHHHHHccccEEEEEccccc
Coil and Loop (DISEMBL)
mfttkkkiqkdkdaeptEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRrivrppkkgsavqrprsrTLTAVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFldpkernnteyklesfsgvyrkltgkdvvfdypitda
Flexible Loop (DISEMBL)
mfttkkkiqkdkdaepteFEETVAQALFDLENTNQELKSDLKDLYINQAiqmdvsgnrkaIVVYVPYRLRKAYRKIHSrlvrelekkfsgkdvvliatrrivrppkkgsavqrprsrtltavhdamledvvypaeivgkrvryrldgskiikifldpkernnteyklesfsgvyrkltgkdvvfdypitda
Low Complexity Region (SEG)
MFTTKKKIQKDKDAEPTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQRPRSRTLTAVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRKLTGKDVVFDYPITDA
Disordered region (IsUnstruct)
*************************ALFDL******LKSDLKDLYINQAIQMDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIV***************TLTAVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRKLTGKDVVFDYPI***
Disordered Region (DISOPRED)
*******************EETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATR*******************LTAVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRKLTGKDVVFDYPIT**
Disordered Region (DISEMBL)
******************FEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRP************RTLTAVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRKLTGKDVVFDYPITDA
Disordered Region (DISPRO)
*FTTKKKIQKDKDAEPTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPP*********RSRTLTAVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRKLTGKDVVFDYPIT**
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MFTTKKKIQKDKDAEPTEFEETVAQAxxxxxxxxxxxxxxxxxxxxxQAIQMDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQRPRSRTLTAVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRKLTGKDVVFDYPITDA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	191	2.2.26 [Sep-21-2011]
Q9ZNS1	190	40S ribosomal protein S7	N/A	no	0.994	1.0	0.815	2e-90
Q8LJU5	192	40S ribosomal protein S7	no	no	1.0	0.994	0.821	2e-90
Q9XH45	191	40S ribosomal protein S7	N/A	no	0.994	0.994	0.789	2e-89
Q8LD03	190	40S ribosomal protein S7-	yes	no	0.984	0.989	0.797	4e-89
Q9XET4	192	40S ribosomal protein S7	N/A	no	0.994	0.989	0.805	1e-88
Q949H0	191	40S ribosomal protein S7	N/A	no	0.989	0.989	0.810	6e-88
Q9M885	191	40S ribosomal protein S7-	no	no	1.0	1.0	0.780	2e-87
Q9C514	191	40S ribosomal protein S7-	no	no	1.0	1.0	0.774	1e-85
Q90YR7	194	40S ribosomal protein S7	N/A	no	0.973	0.958	0.560	6e-56
P02362	194	40S ribosomal protein S7	N/A	no	0.973	0.958	0.560	1e-55

>sp|Q9ZNS1|RS7_AVIMR 40S ribosomal protein S7 OS=Avicennia marina GN=RPS7 PE=2 SV=1

 Score =  331 bits (849), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 155/190 (81%), Positives = 180/190 (94%)

Query: 1   MFTTKKKIQKDKDAEPTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKA 60
           M+T  +KI KDKDAEPTEFEE VAQALFD ENTNQE+KSDLKDLYIN A+Q+DVSG +KA
Sbjct: 1   MYTALQKIHKDKDAEPTEFEENVAQALFDFENTNQEIKSDLKDLYINSALQIDVSGGKKA 60

Query: 61  IVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQRPRSRTLT 120
           +V++VPYRLRK++RKIH RLVRELEKKFSGK+VVLIATRRI+RPPKKGSAVQRPRSRTLT
Sbjct: 61  VVIHVPYRLRKSFRKIHPRLVRELEKKFSGKEVVLIATRRILRPPKKGSAVQRPRSRTLT 120

Query: 121 AVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRKLTGK 180
           AVHDAMLED+VYPAEIVGKRVRYRLDGSKI+K+FLDPK +N+TE KLE+F+GVYRKL+GK
Sbjct: 121 AVHDAMLEDIVYPAEIVGKRVRYRLDGSKIMKVFLDPKAKNDTENKLETFAGVYRKLSGK 180

Query: 181 DVVFDYPITD 190
           DVVF++P+T+
Sbjct: 181 DVVFEFPLTE 190

Avicennia marina (taxid: 82927)

>sp|Q8LJU5|RS7_ORYSJ 40S ribosomal protein S7 OS=Oryza sativa subsp. japonica GN=RPS7 PE=2 SV=2

 Score =  331 bits (848), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 157/191 (82%), Positives = 176/191 (92%)

Query: 1   MFTTKKKIQKDKDAEPTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKA 60
           M+T ++KIQKDK  EPTEFE+TVAQA FDLEN NQELKSDLKDLYIN A+QMD+ GNRKA
Sbjct: 1   MYTARRKIQKDKGLEPTEFEDTVAQAFFDLENGNQELKSDLKDLYINGAVQMDLPGNRKA 60

Query: 61  IVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQRPRSRTLT 120
           +++YVPYRLRKAY+KIH RLVRELEKKFSGKDVVL+ATRRIVRPPKKGSAV RPR+RTLT
Sbjct: 61  VIIYVPYRLRKAYKKIHVRLVRELEKKFSGKDVVLVATRRIVRPPKKGSAVVRPRTRTLT 120

Query: 121 AVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRKLTGK 180
           AVHD +LEDVVYPAEIVGKRVRY LDG KI+KIFLDPKERNNTEYKL++FS VYR+L GK
Sbjct: 121 AVHDGILEDVVYPAEIVGKRVRYHLDGRKIMKIFLDPKERNNTEYKLDTFSSVYRRLCGK 180

Query: 181 DVVFDYPITDA 191
           DVVFDYP+T+ 
Sbjct: 181 DVVFDYPMTET 191

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9XH45|RS7_BRAOL 40S ribosomal protein S7 OS=Brassica oleracea GN=RPS7 PE=2 SV=1

 Score =  327 bits (839), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 150/190 (78%), Positives = 174/190 (91%)

Query: 1   MFTTKKKIQKDKDAEPTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKA 60
           MF+ + KI KDK   PTEFEE VAQA FDLENTNQELKSDLKDLYINQA+ MD++GNRKA
Sbjct: 1   MFSAQNKIHKDKGVAPTEFEERVAQAFFDLENTNQELKSDLKDLYINQAVSMDIAGNRKA 60

Query: 61  IVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQRPRSRTLT 120
           +V+YVP+RLRKA+RKIHSRLVRELEKKFSG DV+ +ATRRI+RPPKKGSAVQRPR+RTLT
Sbjct: 61  VVIYVPFRLRKAFRKIHSRLVRELEKKFSGNDVIFVATRRIMRPPKKGSAVQRPRNRTLT 120

Query: 121 AVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRKLTGK 180
           +VH+AMLEDV YPAEIVGKR RYR+DG+KI+K++L+PKERNNTEYKLE+  GVYRKLTGK
Sbjct: 121 SVHEAMLEDVAYPAEIVGKRTRYRVDGTKIMKVYLEPKERNNTEYKLETMVGVYRKLTGK 180

Query: 181 DVVFDYPITD 190
           DVVF+YP+ D
Sbjct: 181 DVVFEYPVAD 190

Brassica oleracea (taxid: 3712)

>sp|Q8LD03|RS73_ARATH 40S ribosomal protein S7-3 OS=Arabidopsis thaliana GN=RPS7C PE=2 SV=2

 Score =  326 bits (836), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 150/188 (79%), Positives = 175/188 (93%)

Query: 1   MFTTKKKIQKDKDAEPTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKA 60
           MF+ + KI+KDK+AEPTE EE VAQALFDLENTNQELKS+LKDLYINQA+ MD+SGNRKA
Sbjct: 1   MFSAQNKIKKDKNAEPTECEEQVAQALFDLENTNQELKSELKDLYINQAVHMDISGNRKA 60

Query: 61  IVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQRPRSRTLT 120
           +V+YVP+RLRKA+RKIH RLVRELEKKFSGKDV+ + TRRI+RPPKKG+AVQRPR+RTLT
Sbjct: 61  VVIYVPFRLRKAFRKIHPRLVRELEKKFSGKDVIFVTTRRIMRPPKKGAAVQRPRNRTLT 120

Query: 121 AVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRKLTGK 180
           +VH+AMLEDV +PAEIVGKR RYRLDGSKI+K+FLD KE+NNTEYKLE+  GVYRKLTGK
Sbjct: 121 SVHEAMLEDVAFPAEIVGKRTRYRLDGSKIMKVFLDAKEKNNTEYKLETMVGVYRKLTGK 180

Query: 181 DVVFDYPI 188
           DVVF+YP+
Sbjct: 181 DVVFEYPV 188

Arabidopsis thaliana (taxid: 3702)

>sp|Q9XET4|RS7_SECCE 40S ribosomal protein S7 OS=Secale cereale GN=RPS7 PE=2 SV=1

 Score =  325 bits (833), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 153/190 (80%), Positives = 175/190 (92%)

Query: 1   MFTTKKKIQKDKDAEPTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKA 60
           M+T +KKIQKDK  EP+EFE+TVAQA FDLEN NQELKSD+KDLYIN A QMDV+GNRKA
Sbjct: 1   MYTARKKIQKDKGLEPSEFEDTVAQAFFDLENGNQELKSDVKDLYINAAFQMDVAGNRKA 60

Query: 61  IVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQRPRSRTLT 120
           +V++VPYRLRK +RKIH RLVRELEKKFSGKDVV++ATRRIVRPPKKGSAV RPR+RTLT
Sbjct: 61  VVIHVPYRLRKNFRKIHVRLVRELEKKFSGKDVVIVATRRIVRPPKKGSAVVRPRTRTLT 120

Query: 121 AVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRKLTGK 180
           AVHD +LEDVVYPAEIVGKRVRYRLDGSKIIKIFLDP ERNNTEYKL++F+ VYR+L GK
Sbjct: 121 AVHDGLLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPMERNNTEYKLDTFTAVYRRLCGK 180

Query: 181 DVVFDYPITD 190
           DVV++YP+ +
Sbjct: 181 DVVYEYPVAE 190

Secale cereale (taxid: 4550)

>sp|Q949H0|RS7_HORVU 40S ribosomal protein S7 OS=Hordeum vulgare GN=RPS7 PE=2 SV=1

 Score =  322 bits (826), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 154/190 (81%), Positives = 174/190 (91%), Gaps = 1/190 (0%)

Query: 1   MFTTKKKIQKDKDAEPTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKA 60
           M+T +KKIQKDK  EP+EFE+TVAQA FDLEN NQELKSDLKDLYIN AIQMDV GNRKA
Sbjct: 1   MYTARKKIQKDKGVEPSEFEDTVAQAFFDLENGNQELKSDLKDLYINTAIQMDVVGNRKA 60

Query: 61  IVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQRPRSRTLT 120
           +V++VPYRLRK +RKIH RLVRELE+  SGKDVV +ATRRIVRPPKKGSAVQRPR+RTLT
Sbjct: 61  VVIHVPYRLRKPFRKIHVRLVRELER-VSGKDVVFVATRRIVRPPKKGSAVQRPRTRTLT 119

Query: 121 AVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRKLTGK 180
           AVHD +LEDVVYPAEIVGKRVRYRLDG+K+IKI+LDPKERNNTEYKLE+FS VYR+L GK
Sbjct: 120 AVHDGILEDVVYPAEIVGKRVRYRLDGAKVIKIYLDPKERNNTEYKLETFSAVYRRLCGK 179

Query: 181 DVVFDYPITD 190
           DVVF+YP+ +
Sbjct: 180 DVVFEYPVAE 189

Hordeum vulgare (taxid: 4513)

>sp|Q9M885|RS72_ARATH 40S ribosomal protein S7-2 OS=Arabidopsis thaliana GN=RPS7B PE=2 SV=1

 Score =  321 bits (823), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 149/191 (78%), Positives = 174/191 (91%)

Query: 1   MFTTKKKIQKDKDAEPTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKA 60
           M++ + KI KDK   PTEFEE V QALFDLENTNQELKS+LKDLYINQA+QMD+SGNRKA
Sbjct: 1   MYSGQNKIHKDKGVAPTEFEEQVTQALFDLENTNQELKSELKDLYINQAVQMDISGNRKA 60

Query: 61  IVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQRPRSRTLT 120
           +V+YVP+RLRKA+RKIH RLVRELEKKFSGKDV+ +ATRRI+RPPKKGSAVQRPR+RTLT
Sbjct: 61  VVIYVPFRLRKAFRKIHLRLVRELEKKFSGKDVIFVATRRIMRPPKKGSAVQRPRNRTLT 120

Query: 121 AVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRKLTGK 180
           +VH+AMLEDV YPAEIVGKR RYRLDG+KI+K+FLD K +N+TEYKLE+  GVYRKLTGK
Sbjct: 121 SVHEAMLEDVAYPAEIVGKRTRYRLDGTKIMKVFLDSKLKNDTEYKLETMVGVYRKLTGK 180

Query: 181 DVVFDYPITDA 191
           DVVF+YP+ +A
Sbjct: 181 DVVFEYPVIEA 191

Arabidopsis thaliana (taxid: 3702)

>sp|Q9C514|RS71_ARATH 40S ribosomal protein S7-1 OS=Arabidopsis thaliana GN=RPS7A PE=2 SV=1

 Score =  315 bits (807), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 148/191 (77%), Positives = 174/191 (91%)

Query: 1   MFTTKKKIQKDKDAEPTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKA 60
           MF+ + KI K+K  E +E +E VAQA FDLENTNQELKS+LKDLY+N A+Q+D+SG RKA
Sbjct: 1   MFSAQHKIHKEKGVELSELDEQVAQAFFDLENTNQELKSELKDLYVNSAVQVDISGGRKA 60

Query: 61  IVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQRPRSRTLT 120
           IVV VPYRLRKAYRKIH RLVRELEKKFSGKDV+LIATRRIVRPPKKGSA +RPR+RTLT
Sbjct: 61  IVVNVPYRLRKAYRKIHVRLVRELEKKFSGKDVILIATRRIVRPPKKGSAAKRPRNRTLT 120

Query: 121 AVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRKLTGK 180
           +VH+A+L+DVV PAEIVGKR RYRLDG+KI+K+FLDPKERNNTEYK+E+FS VY+KLTGK
Sbjct: 121 SVHEAILDDVVLPAEIVGKRTRYRLDGTKIMKVFLDPKERNNTEYKVEAFSAVYKKLTGK 180

Query: 181 DVVFDYPITDA 191
           DVVF++PIT+A
Sbjct: 181 DVVFEFPITEA 191

Arabidopsis thaliana (taxid: 3702)

>sp|Q90YR7|RS7_ICTPU 40S ribosomal protein S7 OS=Ictalurus punctatus GN=rps7 PE=2 SV=1

 Score =  216 bits (551), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 107/191 (56%), Positives = 146/191 (76%), Gaps = 5/191 (2%)

Query: 1   MFTTKKKIQKDKDAEPTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKA 60
           MF++  KI K    +P EFE  ++QAL +LE  N +LK+ L++L I  A +++V G+RKA
Sbjct: 1   MFSSSAKIVKANGEKPDEFESGISQALLELE-MNSDLKAQLRELNITAAKEIEVGGSRKA 59

Query: 61  IVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQ----RPRS 116
           I+++VP    KA++KI  RLVRELEKKFSGK VV IA RRI+  P + S  +    RPRS
Sbjct: 60  IIIFVPVPQLKAFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRS 119

Query: 117 RTLTAVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRK 176
           RTLTAVHDA+LED+VYP+EIVGKR+R +LD S++IK+ LD  ++NN E+K+E+F+GVY+K
Sbjct: 120 RTLTAVHDAILEDLVYPSEIVGKRIRVKLDSSRLIKVHLDKAQQNNVEHKVETFAGVYKK 179

Query: 177 LTGKDVVFDYP 187
           LTGKDVVF++P
Sbjct: 180 LTGKDVVFEFP 190

Ictalurus punctatus (taxid: 7998)

>sp|P02362|RS7_XENLA 40S ribosomal protein S7 OS=Xenopus laevis GN=rps7 PE=2 SV=2

 Score =  216 bits (549), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 107/191 (56%), Positives = 145/191 (75%), Gaps = 5/191 (2%)

Query: 1   MFTTKKKIQKDKDAEPTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKA 60
           MF+T  KI K    +P EFE  ++QAL +LE  N +LK+ L++L I  A +++V   RKA
Sbjct: 1   MFSTSAKIVKPNGEKPDEFESGISQALLELE-MNSDLKAQLRELNITAAKEIEVGAGRKA 59

Query: 61  IVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQ----RPRS 116
           I+++VP    K+++KI  RLVRELEKKFSGK VV IA RRI+  P + S  +    RPRS
Sbjct: 60  IIIFVPVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRS 119

Query: 117 RTLTAVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRK 176
           RTLTAVHDA+LED+VYP+EIVG+R+R +LDGS++IK+ LD  ++NN E+K+E+FSGVY+K
Sbjct: 120 RTLTAVHDAILEDLVYPSEIVGRRIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKK 179

Query: 177 LTGKDVVFDYP 187
           LTGKDVVF++P
Sbjct: 180 LTGKDVVFEFP 190

Xenopus laevis (taxid: 8355)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	191
224138846	191	predicted protein [Populus trichocarpa]	1.0	1.0	0.900	1e-96
351727278	191	uncharacterized protein LOC100500684 [Gl	1.0	1.0	0.890	1e-96
224087437	214	predicted protein [Populus trichocarpa]	1.0	0.892	0.884	1e-96
118483548	191	unknown [Populus trichocarpa]	1.0	1.0	0.890	5e-96
118486144	191	unknown [Populus trichocarpa]	1.0	1.0	0.884	6e-96
118483935	191	unknown [Populus trichocarpa]	1.0	1.0	0.895	6e-96
351725251	191	uncharacterized protein LOC100305484 [Gl	1.0	1.0	0.879	2e-95
224077178	191	predicted protein [Populus trichocarpa]	1.0	1.0	0.879	3e-95
224127480	191	predicted protein [Populus trichocarpa]	1.0	1.0	0.869	9e-95
255581332	191	40S ribosomal protein S7, putative [Rici	1.0	1.0	0.874	1e-94

>gi|224138846|ref|XP_002322916.1| predicted protein [Populus trichocarpa] gi|222867546|gb|EEF04677.1| predicted protein [Populus trichocarpa]

 Score =  357 bits (917), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 172/191 (90%), Positives = 186/191 (97%)

Query: 1   MFTTKKKIQKDKDAEPTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKA 60
           MFTTKKKIQKDKDAEPTEFEETVAQALFDLENT+ ELK+DLKDL+IN A+Q+DV+GNRKA
Sbjct: 1   MFTTKKKIQKDKDAEPTEFEETVAQALFDLENTSSELKTDLKDLFINSAVQIDVAGNRKA 60

Query: 61  IVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQRPRSRTLT 120
           IV+YVPYRLRKAYRKIH RLVRELEKKFSGKDVVL+ATRRIVRPPKKGSAVQRPRSRTLT
Sbjct: 61  IVIYVPYRLRKAYRKIHLRLVRELEKKFSGKDVVLLATRRIVRPPKKGSAVQRPRSRTLT 120

Query: 121 AVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRKLTGK 180
           AVH+AMLED+VYPAEIVGKR RYR+DGSKI KIFLDPKERNNTEYKLESF+GVYRKLTGK
Sbjct: 121 AVHEAMLEDLVYPAEIVGKRTRYRIDGSKISKIFLDPKERNNTEYKLESFAGVYRKLTGK 180

Query: 181 DVVFDYPITDA 191
           DVVFD+PIT+A
Sbjct: 181 DVVFDFPITEA 191

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351727278|ref|NP_001237923.1| uncharacterized protein LOC100500684 [Glycine max] gi|255630929|gb|ACU15827.1| unknown [Glycine max]

 Score =  357 bits (916), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 170/191 (89%), Positives = 187/191 (97%)

Query: 1   MFTTKKKIQKDKDAEPTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKA 60
           M+T++KKI KDKDAEPTEFEETVAQ LFDLENTNQ+LKSDLKDLYINQAIQMDV+GNRKA
Sbjct: 1   MYTSRKKIHKDKDAEPTEFEETVAQYLFDLENTNQDLKSDLKDLYINQAIQMDVAGNRKA 60

Query: 61  IVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQRPRSRTLT 120
           +V+YVP+RLRKA+RKIH RLVRELEKKFSGKDVV IATRRIVRPPKKGSAVQRPR+RTLT
Sbjct: 61  VVIYVPFRLRKAFRKIHLRLVRELEKKFSGKDVVFIATRRIVRPPKKGSAVQRPRTRTLT 120

Query: 121 AVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRKLTGK 180
           AVHDAMLEDVVYPAEIVGKRVRYR+DGSKI+K+FLDPKERNNTEYKLE+FSGVYRKLTGK
Sbjct: 121 AVHDAMLEDVVYPAEIVGKRVRYRIDGSKIMKVFLDPKERNNTEYKLETFSGVYRKLTGK 180

Query: 181 DVVFDYPITDA 191
           DVVF+YPI++A
Sbjct: 181 DVVFEYPISEA 191

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224087437|ref|XP_002308166.1| predicted protein [Populus trichocarpa] gi|222854142|gb|EEE91689.1| predicted protein [Populus trichocarpa]

 Score =  357 bits (916), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 169/191 (88%), Positives = 186/191 (97%)

Query: 1   MFTTKKKIQKDKDAEPTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKA 60
           MF+TKKKIQKDKDAEPTEFEETVAQALFDLENTN +LKSDLKDL+IN A+Q+DV+GNRKA
Sbjct: 24  MFSTKKKIQKDKDAEPTEFEETVAQALFDLENTNSDLKSDLKDLFINSAVQIDVAGNRKA 83

Query: 61  IVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQRPRSRTLT 120
           IV+YVPYRLRKAYRK+H RLVRELEKKFSGKDVVL+ATRRIVRPPKKGSAVQRPRSRTLT
Sbjct: 84  IVIYVPYRLRKAYRKVHLRLVRELEKKFSGKDVVLLATRRIVRPPKKGSAVQRPRSRTLT 143

Query: 121 AVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRKLTGK 180
           AVH+AMLED+VYPAEIVGKR RYR+DGSKI KIFLDPKERNNTEYKLES++GVYRKLTGK
Sbjct: 144 AVHEAMLEDLVYPAEIVGKRTRYRIDGSKISKIFLDPKERNNTEYKLESYAGVYRKLTGK 203

Query: 181 DVVFDYPITDA 191
           DVVFD+P+T+A
Sbjct: 204 DVVFDFPVTEA 214

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118483548|gb|ABK93672.1| unknown [Populus trichocarpa]

 Score =  355 bits (911), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 170/191 (89%), Positives = 185/191 (96%)

Query: 1   MFTTKKKIQKDKDAEPTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKA 60
           MFTTKKKIQKDKDAEPTEFEE VAQALFDLENT+ ELK+DLKDL+IN A+Q+DV+GNRKA
Sbjct: 1   MFTTKKKIQKDKDAEPTEFEEAVAQALFDLENTSSELKTDLKDLFINSAVQIDVAGNRKA 60

Query: 61  IVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQRPRSRTLT 120
           I++YVPYRLRKAYRKIH RLVRELEKKFSGKDVVL+ATRRIVRPPKKGSAVQRPRSRTLT
Sbjct: 61  IIIYVPYRLRKAYRKIHLRLVRELEKKFSGKDVVLLATRRIVRPPKKGSAVQRPRSRTLT 120

Query: 121 AVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRKLTGK 180
           AVH+AMLED+VYPAEIVGKR RYR+DGSKI KIFLDPKERNNTEYKLESF+GVYRKLTGK
Sbjct: 121 AVHEAMLEDLVYPAEIVGKRTRYRIDGSKISKIFLDPKERNNTEYKLESFAGVYRKLTGK 180

Query: 181 DVVFDYPITDA 191
           DVVFD+PIT+A
Sbjct: 181 DVVFDFPITEA 191

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118486144|gb|ABK94915.1| unknown [Populus trichocarpa]

 Score =  355 bits (911), Expect = 6e-96,   Method: Compositional matrix adjust.
 Identities = 169/191 (88%), Positives = 186/191 (97%)

Query: 1   MFTTKKKIQKDKDAEPTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKA 60
           MF+TKKKIQKDKDAEPTEFEETVAQALFDLENTN +LKSDLKDL+IN A+Q+DV+GNRKA
Sbjct: 1   MFSTKKKIQKDKDAEPTEFEETVAQALFDLENTNSDLKSDLKDLFINSAVQIDVAGNRKA 60

Query: 61  IVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQRPRSRTLT 120
           IV+YVPYRLRKAYRK+H RLVRELEKKFSGKDVVL+ATRRIVRPPKKGSAVQRPRSRTLT
Sbjct: 61  IVIYVPYRLRKAYRKVHLRLVRELEKKFSGKDVVLLATRRIVRPPKKGSAVQRPRSRTLT 120

Query: 121 AVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRKLTGK 180
           AVH+AMLED+VYPAEIVGKR RYR+DGSKI KIFLDPKERNNTEYKLES++GVYRKLTGK
Sbjct: 121 AVHEAMLEDLVYPAEIVGKRTRYRIDGSKISKIFLDPKERNNTEYKLESYAGVYRKLTGK 180

Query: 181 DVVFDYPITDA 191
           DVVFD+P+T+A
Sbjct: 181 DVVFDFPVTEA 191

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118483935|gb|ABK93856.1| unknown [Populus trichocarpa]

 Score =  355 bits (910), Expect = 6e-96,   Method: Compositional matrix adjust.
 Identities = 171/191 (89%), Positives = 185/191 (96%)

Query: 1   MFTTKKKIQKDKDAEPTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKA 60
           MFTTKKKIQKDKDAEPTEFEETVAQALFDLENT+ ELK+DLKDL+IN A+Q+DV+GNRKA
Sbjct: 1   MFTTKKKIQKDKDAEPTEFEETVAQALFDLENTSSELKTDLKDLFINSAVQIDVAGNRKA 60

Query: 61  IVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQRPRSRTLT 120
           IV+YVPYRLRKAYRKIH RLVRELEKKFSGKDVVL+ATRRIVRPPKKGSAVQRP SRTLT
Sbjct: 61  IVIYVPYRLRKAYRKIHLRLVRELEKKFSGKDVVLLATRRIVRPPKKGSAVQRPGSRTLT 120

Query: 121 AVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRKLTGK 180
           AVH+AMLED+VYPAEIVGKR RYR+DGSKI KIFLDPKERNNTEYKLESF+GVYRKLTGK
Sbjct: 121 AVHEAMLEDLVYPAEIVGKRTRYRIDGSKISKIFLDPKERNNTEYKLESFAGVYRKLTGK 180

Query: 181 DVVFDYPITDA 191
           DVVFD+PIT+A
Sbjct: 181 DVVFDFPITEA 191

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351725251|ref|NP_001236062.1| uncharacterized protein LOC100305484 [Glycine max] gi|255625649|gb|ACU13169.1| unknown [Glycine max]

 Score =  353 bits (905), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 168/191 (87%), Positives = 185/191 (96%)

Query: 1   MFTTKKKIQKDKDAEPTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKA 60
           M+T++KKI KDKDAEPTEFEETV Q LFDLENTNQ+LKSDLKDLYINQAIQMDV+GNRKA
Sbjct: 1   MYTSRKKIHKDKDAEPTEFEETVGQYLFDLENTNQDLKSDLKDLYINQAIQMDVAGNRKA 60

Query: 61  IVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQRPRSRTLT 120
           +V+YVP+RLRKA+RKIH RLVRELEKKFSGK VVLIATRRIVRPPKKGSAVQRPR+RTLT
Sbjct: 61  VVIYVPFRLRKAFRKIHLRLVRELEKKFSGKGVVLIATRRIVRPPKKGSAVQRPRTRTLT 120

Query: 121 AVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRKLTGK 180
           AVHDAMLEDVVYPAEIVGKR RYR+DGSKI+K+FLDPKERNNTEYKLE+FSGVYRKLTGK
Sbjct: 121 AVHDAMLEDVVYPAEIVGKRARYRIDGSKIMKVFLDPKERNNTEYKLETFSGVYRKLTGK 180

Query: 181 DVVFDYPITDA 191
           DVVF+YPI++A
Sbjct: 181 DVVFEYPISEA 191

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224077178|ref|XP_002305166.1| predicted protein [Populus trichocarpa] gi|118484634|gb|ABK94189.1| unknown [Populus trichocarpa] gi|222848130|gb|EEE85677.1| predicted protein [Populus trichocarpa]

 Score =  353 bits (905), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 168/191 (87%), Positives = 186/191 (97%)

Query: 1   MFTTKKKIQKDKDAEPTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKA 60
           M+TTKKKIQKDKDAEPTEFEETVAQALFDLENT+ +LKSDLKDL+IN A+Q+DV+GNRKA
Sbjct: 1   MYTTKKKIQKDKDAEPTEFEETVAQALFDLENTSSDLKSDLKDLFINSAVQIDVAGNRKA 60

Query: 61  IVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQRPRSRTLT 120
           IV+YVPYRLRKAYRK+H RLVRELEKKFSGKDVVL+ATRRIVRPPKKGSAVQRPRSRTLT
Sbjct: 61  IVIYVPYRLRKAYRKVHLRLVRELEKKFSGKDVVLLATRRIVRPPKKGSAVQRPRSRTLT 120

Query: 121 AVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRKLTGK 180
           AVH+AMLED+VYPAEIVGKR RYR+DGSKI KIFLDPKERNNTEYKLES++GVYRKLTGK
Sbjct: 121 AVHEAMLEDLVYPAEIVGKRTRYRIDGSKISKIFLDPKERNNTEYKLESYAGVYRKLTGK 180

Query: 181 DVVFDYPITDA 191
           DVVFD+P+T+A
Sbjct: 181 DVVFDFPVTEA 191

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224127480|ref|XP_002329288.1| predicted protein [Populus trichocarpa] gi|118483869|gb|ABK93825.1| unknown [Populus trichocarpa] gi|222870742|gb|EEF07873.1| predicted protein [Populus trichocarpa]

 Score =  351 bits (900), Expect = 9e-95,   Method: Compositional matrix adjust.
 Identities = 166/191 (86%), Positives = 186/191 (97%)

Query: 1   MFTTKKKIQKDKDAEPTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKA 60
           M+TTKKKIQKDKDAEPTEFEETVAQALFDLEN+N +LKS+LKDL+IN A+Q+DV+GNRKA
Sbjct: 1   MYTTKKKIQKDKDAEPTEFEETVAQALFDLENSNSDLKSELKDLFINSAVQIDVAGNRKA 60

Query: 61  IVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQRPRSRTLT 120
           IV+YVPYRLRK+YRK+H RLVRELEKKFSGKDVVL+ATRRIVRPPKKGSAVQRPRSRTLT
Sbjct: 61  IVIYVPYRLRKSYRKVHLRLVRELEKKFSGKDVVLLATRRIVRPPKKGSAVQRPRSRTLT 120

Query: 121 AVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRKLTGK 180
           AVH+AMLED+VYPAEIVGKR RYR+DGSKI KIFLDPKERNNTEYKLES++GVYRKLTGK
Sbjct: 121 AVHEAMLEDLVYPAEIVGKRTRYRIDGSKISKIFLDPKERNNTEYKLESYAGVYRKLTGK 180

Query: 181 DVVFDYPITDA 191
           DVVFD+P+T+A
Sbjct: 181 DVVFDFPVTEA 191

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255581332|ref|XP_002531476.1| 40S ribosomal protein S7, putative [Ricinus communis] gi|223528903|gb|EEF30900.1| 40S ribosomal protein S7, putative [Ricinus communis]

 Score =  350 bits (899), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 167/191 (87%), Positives = 185/191 (96%)

Query: 1   MFTTKKKIQKDKDAEPTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKA 60
           M+TT KKI+KDKDAEPTEFEETVAQA+FDLENT+Q+LKSDLKDL+IN A+QMDV+GNRKA
Sbjct: 1   MYTTWKKIRKDKDAEPTEFEETVAQAIFDLENTSQDLKSDLKDLFINSAVQMDVAGNRKA 60

Query: 61  IVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQRPRSRTLT 120
           +V+YVPYRLRKAYRKIH RLVRELEKKFSGKDVVL+ATRRIVRPPKKGSAVQRPR+RTLT
Sbjct: 61  VVIYVPYRLRKAYRKIHLRLVRELEKKFSGKDVVLVATRRIVRPPKKGSAVQRPRTRTLT 120

Query: 121 AVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRKLTGK 180
           AVHDAMLEDVVYPAEIVGKR RYR+DGSK +KIFLDPKER NTEYKLE+F+GVYRKLTGK
Sbjct: 121 AVHDAMLEDVVYPAEIVGKRTRYRIDGSKTMKIFLDPKERINTEYKLETFTGVYRKLTGK 180

Query: 181 DVVFDYPITDA 191
           DVVF+YPIT+A
Sbjct: 181 DVVFEYPITEA 191

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	191
UNIPROTKB|Q8LJU5	192	RPS7 "40S ribosomal protein S7	0.994	0.989	0.826	6.4e-83
UNIPROTKB|Q10MS5	192	Os03g0297100 "Os03g0297100 pro	0.994	0.989	0.8	3.6e-82
TAIR|locus:2181402	190	AT5G16130 [Arabidopsis thalian	0.984	0.989	0.797	1.8e-80
TAIR|locus:2076839	191	AT3G02560 [Arabidopsis thalian	1.0	1.0	0.780	2e-79
TAIR|locus:2200839	191	AT1G48830 [Arabidopsis thalian	1.0	1.0	0.774	1e-77
UNIPROTKB|A8JGI9	194	RPS7 "Ribosomal protein S7" [C	0.973	0.958	0.668	7.4e-66
UNIPROTKB|F1NN16	201	RPS7 "Uncharacterized protein"	0.973	0.925	0.560	7.2e-52
UNIPROTKB|P50894	194	rps7 "40S ribosomal protein S7	0.973	0.958	0.549	3.1e-51
UNIPROTKB|A6H769	194	RPS7 "40S ribosomal protein S7	0.973	0.958	0.554	4e-51
UNIPROTKB|P62081	194	RPS7 "40S ribosomal protein S7	0.973	0.958	0.554	4e-51

UNIPROTKB|Q8LJU5 RPS7 "40S ribosomal protein S7" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 831 (297.6 bits), Expect = 6.4e-83, P = 6.4e-83
 Identities = 157/190 (82%), Positives = 176/190 (92%)

Query:     1 MFTTKKKIQKDKDAEPTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKA 60
             M+T ++KIQKDK  EPTEFE+TVAQA FDLEN NQELKSDLKDLYIN A+QMD+ GNRKA
Sbjct:     1 MYTARRKIQKDKGLEPTEFEDTVAQAFFDLENGNQELKSDLKDLYINGAVQMDLPGNRKA 60

Query:    61 IVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQRPRSRTLT 120
             +++YVPYRLRKAY+KIH RLVRELEKKFSGKDVVL+ATRRIVRPPKKGSAV RPR+RTLT
Sbjct:    61 VIIYVPYRLRKAYKKIHVRLVRELEKKFSGKDVVLVATRRIVRPPKKGSAVVRPRTRTLT 120

Query:   121 AVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRKLTGK 180
             AVHD +LEDVVYPAEIVGKRVRY LDG KI+KIFLDPKERNNTEYKL++FS VYR+L GK
Sbjct:   121 AVHDGILEDVVYPAEIVGKRVRYHLDGRKIMKIFLDPKERNNTEYKLDTFSSVYRRLCGK 180

Query:   181 DVVFDYPITD 190
             DVVFDYP+T+
Sbjct:   181 DVVFDYPMTE 190

GO:0006364 "rRNA processing" evidence=ISS

GO:0022627 "cytosolic small ribosomal subunit" evidence=ISS

GO:0030686 "90S preribosome" evidence=ISS

GO:0032040 "small-subunit processome" evidence=ISS

GO:0042274 "ribosomal small subunit biogenesis" evidence=ISS

UNIPROTKB|Q10MS5 Os03g0297100 "Os03g0297100 protein" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 824 (295.1 bits), Expect = 3.6e-82, P = 3.6e-82
 Identities = 152/190 (80%), Positives = 179/190 (94%)

Query:     1 MFTTKKKIQKDKDAEPTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKA 60
             M+T +KKIQK+K  EP+EFE++VAQA FDLEN NQELKS+LKDLYIN A+QMD++GNRKA
Sbjct:     1 MYTARKKIQKEKGLEPSEFEDSVAQAFFDLENGNQELKSELKDLYINNAVQMDIAGNRKA 60

Query:    61 IVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQRPRSRTLT 120
             +V++VPYRLRKA++KIH RLVRELEKKFSGKDVV++ATRRIVRPPKKGSAVQRPR+RTLT
Sbjct:    61 VVIHVPYRLRKAFKKIHVRLVRELEKKFSGKDVVIVATRRIVRPPKKGSAVQRPRTRTLT 120

Query:   121 AVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRKLTGK 180
             AVHD +LEDVVYPAEIVGKR+RYRLDG+K+IKIFLDPKERNNTEYKLE+FS VYR+L GK
Sbjct:   121 AVHDGILEDVVYPAEIVGKRIRYRLDGAKVIKIFLDPKERNNTEYKLETFSAVYRRLCGK 180

Query:   181 DVVFDYPITD 190
             DV F+YP+T+
Sbjct:   181 DVAFEYPMTE 190

GO:0006364 "rRNA processing" evidence=ISS

GO:0022627 "cytosolic small ribosomal subunit" evidence=ISS

GO:0030686 "90S preribosome" evidence=ISS

GO:0032040 "small-subunit processome" evidence=ISS

GO:0042274 "ribosomal small subunit biogenesis" evidence=ISS

TAIR|locus:2181402 AT5G16130 [Arabidopsis thaliana (taxid:3702)]

 Score = 808 (289.5 bits), Expect = 1.8e-80, P = 1.8e-80
 Identities = 150/188 (79%), Positives = 175/188 (93%)

Query:     1 MFTTKKKIQKDKDAEPTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKA 60
             MF+ + KI+KDK+AEPTE EE VAQALFDLENTNQELKS+LKDLYINQA+ MD+SGNRKA
Sbjct:     1 MFSAQNKIKKDKNAEPTECEEQVAQALFDLENTNQELKSELKDLYINQAVHMDISGNRKA 60

Query:    61 IVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQRPRSRTLT 120
             +V+YVP+RLRKA+RKIH RLVRELEKKFSGKDV+ + TRRI+RPPKKG+AVQRPR+RTLT
Sbjct:    61 VVIYVPFRLRKAFRKIHPRLVRELEKKFSGKDVIFVTTRRIMRPPKKGAAVQRPRNRTLT 120

Query:   121 AVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRKLTGK 180
             +VH+AMLEDV +PAEIVGKR RYRLDGSKI+K+FLD KE+NNTEYKLE+  GVYRKLTGK
Sbjct:   121 SVHEAMLEDVAFPAEIVGKRTRYRLDGSKIMKVFLDAKEKNNTEYKLETMVGVYRKLTGK 180

Query:   181 DVVFDYPI 188
             DVVF+YP+
Sbjct:   181 DVVFEYPV 188

GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005840 "ribosome" evidence=IEA

GO:0006364 "rRNA processing" evidence=IBA

GO:0006412 "translation" evidence=IEA;ISS

GO:0030686 "90S preribosome" evidence=IBA

GO:0032040 "small-subunit processome" evidence=IBA

GO:0042274 "ribosomal small subunit biogenesis" evidence=IBA

GO:0022627 "cytosolic small ribosomal subunit" evidence=ISS;IDA

GO:0005730 "nucleolus" evidence=IDA

GO:0022626 "cytosolic ribosome" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=RCA

GO:0001510 "RNA methylation" evidence=RCA

TAIR|locus:2076839 AT3G02560 [Arabidopsis thaliana (taxid:3702)]

 Score = 798 (286.0 bits), Expect = 2.0e-79, P = 2.0e-79
 Identities = 149/191 (78%), Positives = 174/191 (91%)

Query:     1 MFTTKKKIQKDKDAEPTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKA 60
             M++ + KI KDK   PTEFEE V QALFDLENTNQELKS+LKDLYINQA+QMD+SGNRKA
Sbjct:     1 MYSGQNKIHKDKGVAPTEFEEQVTQALFDLENTNQELKSELKDLYINQAVQMDISGNRKA 60

Query:    61 IVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQRPRSRTLT 120
             +V+YVP+RLRKA+RKIH RLVRELEKKFSGKDV+ +ATRRI+RPPKKGSAVQRPR+RTLT
Sbjct:    61 VVIYVPFRLRKAFRKIHLRLVRELEKKFSGKDVIFVATRRIMRPPKKGSAVQRPRNRTLT 120

Query:   121 AVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRKLTGK 180
             +VH+AMLEDV YPAEIVGKR RYRLDG+KI+K+FLD K +N+TEYKLE+  GVYRKLTGK
Sbjct:   121 SVHEAMLEDVAYPAEIVGKRTRYRLDGTKIMKVFLDSKLKNDTEYKLETMVGVYRKLTGK 180

Query:   181 DVVFDYPITDA 191
             DVVF+YP+ +A
Sbjct:   181 DVVFEYPVIEA 191

GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005840 "ribosome" evidence=IEA

GO:0006364 "rRNA processing" evidence=IBA

GO:0006412 "translation" evidence=IEA;ISS

GO:0030686 "90S preribosome" evidence=IBA

GO:0032040 "small-subunit processome" evidence=IBA

GO:0042274 "ribosomal small subunit biogenesis" evidence=IBA

GO:0022627 "cytosolic small ribosomal subunit" evidence=ISS;IDA

GO:0022626 "cytosolic ribosome" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=RCA

TAIR|locus:2200839 AT1G48830 [Arabidopsis thaliana (taxid:3702)]

 Score = 782 (280.3 bits), Expect = 1.0e-77, P = 1.0e-77
 Identities = 148/191 (77%), Positives = 174/191 (91%)

Query:     1 MFTTKKKIQKDKDAEPTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKA 60
             MF+ + KI K+K  E +E +E VAQA FDLENTNQELKS+LKDLY+N A+Q+D+SG RKA
Sbjct:     1 MFSAQHKIHKEKGVELSELDEQVAQAFFDLENTNQELKSELKDLYVNSAVQVDISGGRKA 60

Query:    61 IVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQRPRSRTLT 120
             IVV VPYRLRKAYRKIH RLVRELEKKFSGKDV+LIATRRIVRPPKKGSA +RPR+RTLT
Sbjct:    61 IVVNVPYRLRKAYRKIHVRLVRELEKKFSGKDVILIATRRIVRPPKKGSAAKRPRNRTLT 120

Query:   121 AVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRKLTGK 180
             +VH+A+L+DVV PAEIVGKR RYRLDG+KI+K+FLDPKERNNTEYK+E+FS VY+KLTGK
Sbjct:   121 SVHEAILDDVVLPAEIVGKRTRYRLDGTKIMKVFLDPKERNNTEYKVEAFSAVYKKLTGK 180

Query:   181 DVVFDYPITDA 191
             DVVF++PIT+A
Sbjct:   181 DVVFEFPITEA 191

GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005840 "ribosome" evidence=IEA

GO:0006364 "rRNA processing" evidence=IBA

GO:0006412 "translation" evidence=IEA;ISS

GO:0030686 "90S preribosome" evidence=IBA

GO:0032040 "small-subunit processome" evidence=IBA

GO:0042274 "ribosomal small subunit biogenesis" evidence=IBA

GO:0022627 "cytosolic small ribosomal subunit" evidence=ISS;IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0022626 "cytosolic ribosome" evidence=IDA

GO:0005618 "cell wall" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

UNIPROTKB|A8JGI9 RPS7 "Ribosomal protein S7" [Chlamydomonas reinhardtii (taxid:3055)]

 Score = 670 (240.9 bits), Expect = 7.4e-66, P = 7.4e-66
 Identities = 125/187 (66%), Positives = 157/187 (83%)

Query:     6 KKIQKDKDAEPTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVS-GNRKAIVVY 64
             KKI K++  EP EFEE VAQALFDLE TN ELK+DL+DLYI  A ++DV+ G RKAI+++
Sbjct:     7 KKIVKERGQEPDEFEEQVAQALFDLEATNAELKADLRDLYITSAKEVDVANGARKAIIIH 66

Query:    65 VPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQRPRSRTLTAVHD 124
             VPYRL KA+ KI  RLVRELEKKFSG+DVV++  RRI+ PP+ G    RPRSRTLTAVHD
Sbjct:    67 VPYRLLKAFHKIQQRLVRELEKKFSGRDVVIVGNRRILPPPRNGKTASRPRSRTLTAVHD 126

Query:   125 AMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRKLTGKDVVF 184
             A+L+D+VYP EIVGKR+RYRLDGSKI+K+ LDPK+RN+TEYKLE+F  VY++LTGKDV F
Sbjct:   127 AILDDLVYPTEIVGKRIRYRLDGSKILKVHLDPKDRNSTEYKLETFGSVYKRLTGKDVSF 186

Query:   185 DYPITDA 191
             ++P+ ++
Sbjct:   187 EFPVAES 193

GO:0006364 "rRNA processing" evidence=ISS

GO:0022627 "cytosolic small ribosomal subunit" evidence=ISS

GO:0030686 "90S preribosome" evidence=ISS

GO:0032040 "small-subunit processome" evidence=ISS

GO:0042274 "ribosomal small subunit biogenesis" evidence=ISS

UNIPROTKB|F1NN16 RPS7 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 538 (194.4 bits), Expect = 7.2e-52, P = 7.2e-52
 Identities = 107/191 (56%), Positives = 146/191 (76%)

Query:     1 MFTTKKKIQKDKDAEPTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKA 60
             MF++  KI K    +P EFE  ++QAL +LE  N +LK+ L++L I  A +++V G RKA
Sbjct:     8 MFSSSAKIVKPNGEKPDEFESGISQALLELE-MNSDLKAQLRELNITAAKEIEVGGGRKA 66

Query:    61 IVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQ----RPRS 116
             I+++VP    K+++KI  RLVRELEKKFSGK VV IA RRI+  P + S  +    RPRS
Sbjct:    67 IIIFVPVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRS 126

Query:   117 RTLTAVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRK 176
             RTLTAVHDA+LED+V+P+EIVGKR+R +LDGS++IK+ LD  ++NN E+K+E+FSGVY+K
Sbjct:   127 RTLTAVHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKK 186

Query:   177 LTGKDVVFDYP 187
             LTGKDVVF++P
Sbjct:   187 LTGKDVVFEFP 197

GO:0003735 "structural constituent of ribosome" evidence=IEA

GO:0006412 "translation" evidence=IEA

GO:0005730 "nucleolus" evidence=IEA

GO:0006364 "rRNA processing" evidence=IEA

GO:0022627 "cytosolic small ribosomal subunit" evidence=IEA

GO:0042274 "ribosomal small subunit biogenesis" evidence=IEA

UNIPROTKB|P50894 rps7 "40S ribosomal protein S7" [Takifugu rubripes (taxid:31033)]

 Score = 532 (192.3 bits), Expect = 3.1e-51, P = 3.1e-51
 Identities = 105/191 (54%), Positives = 148/191 (77%)

Query:     1 MFTTKKKIQKDKDAEPTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKA 60
             MF+T  KI K    +P EFE  ++QAL +LE  N +LK+ L++L I  A +++V G+RKA
Sbjct:     1 MFSTSAKIVKPNGEKPDEFESGISQALLELE-MNSDLKAQLRELNITAAKEIEVGGSRKA 59

Query:    61 IVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIV-RPPKKGSAV---QRPRS 116
             I+++VP    K+++KI  RLVRELEKKFSGK VV IA RRI+ +P +K  +    +RPRS
Sbjct:    60 IIIFVPVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRSKNKQKRPRS 119

Query:   117 RTLTAVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRK 176
             RTLT+VHDA+LED+V+P+EIVGKR+R ++D S++IK+ LD  ++NN E+K+E+FSGVY+K
Sbjct:   120 RTLTSVHDAILEDLVFPSEIVGKRIRVKMDSSRLIKVHLDKAQQNNVEHKVETFSGVYKK 179

Query:   177 LTGKDVVFDYP 187
             LTGKDVVF++P
Sbjct:   180 LTGKDVVFEFP 190

GO:0006364 "rRNA processing" evidence=ISS

GO:0022627 "cytosolic small ribosomal subunit" evidence=ISS

GO:0030686 "90S preribosome" evidence=ISS

GO:0032040 "small-subunit processome" evidence=ISS

GO:0042274 "ribosomal small subunit biogenesis" evidence=ISS

UNIPROTKB|A6H769 RPS7 "40S ribosomal protein S7" [Bos taurus (taxid:9913)]

 Score = 531 (192.0 bits), Expect = 4.0e-51, P = 4.0e-51
 Identities = 106/191 (55%), Positives = 145/191 (75%)

Query:     1 MFTTKKKIQKDKDAEPTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKA 60
             MF++  KI K    +P EFE  ++QAL +LE  N +LK+ L++L I  A +++V G RKA
Sbjct:     1 MFSSSAKIVKPNGEKPDEFESGISQALLELE-MNSDLKAQLRELNITAAKEIEVGGGRKA 59

Query:    61 IVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQ----RPRS 116
             I+++VP    K+++KI  RLVRELEKKFSGK VV IA RRI+  P + S  +    RPRS
Sbjct:    60 IIIFVPVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRS 119

Query:   117 RTLTAVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRK 176
             RTLTAVHDA+LED+V+P+EIVGKR+R +LDGS++IK+ LD  ++NN E+K+E+FSGVY+K
Sbjct:   120 RTLTAVHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKK 179

Query:   177 LTGKDVVFDYP 187
             LTGKDV F++P
Sbjct:   180 LTGKDVNFEFP 190

GO:0042274 "ribosomal small subunit biogenesis" evidence=ISS

GO:0032040 "small-subunit processome" evidence=ISS

GO:0030686 "90S preribosome" evidence=ISS

GO:0022627 "cytosolic small ribosomal subunit" evidence=ISS

GO:0006364 "rRNA processing" evidence=ISS

GO:0005815 "microtubule organizing center" evidence=IEA

GO:0005730 "nucleolus" evidence=IEA

GO:0006412 "translation" evidence=IEA

GO:0003735 "structural constituent of ribosome" evidence=IEA

UNIPROTKB|P62081 RPS7 "40S ribosomal protein S7" [Homo sapiens (taxid:9606)]

 Score = 531 (192.0 bits), Expect = 4.0e-51, P = 4.0e-51
 Identities = 106/191 (55%), Positives = 145/191 (75%)

Query:     1 MFTTKKKIQKDKDAEPTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKA 60
             MF++  KI K    +P EFE  ++QAL +LE  N +LK+ L++L I  A +++V G RKA
Sbjct:     1 MFSSSAKIVKPNGEKPDEFESGISQALLELE-MNSDLKAQLRELNITAAKEIEVGGGRKA 59

Query:    61 IVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQ----RPRS 116
             I+++VP    K+++KI  RLVRELEKKFSGK VV IA RRI+  P + S  +    RPRS
Sbjct:    60 IIIFVPVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRS 119

Query:   117 RTLTAVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRK 176
             RTLTAVHDA+LED+V+P+EIVGKR+R +LDGS++IK+ LD  ++NN E+K+E+FSGVY+K
Sbjct:   120 RTLTAVHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKK 179

Query:   177 LTGKDVVFDYP 187
             LTGKDV F++P
Sbjct:   180 LTGKDVNFEFP 190

GO:0003735 "structural constituent of ribosome" evidence=IEA

GO:0005815 "microtubule organizing center" evidence=IEA

GO:0030686 "90S preribosome" evidence=IBA

GO:0032040 "small-subunit processome" evidence=IBA

GO:0005515 "protein binding" evidence=IPI

GO:0005840 "ribosome" evidence=IDA

GO:0022627 "cytosolic small ribosomal subunit" evidence=NAS;IDA

GO:0006412 "translation" evidence=IC;NAS;TAS

GO:0006364 "rRNA processing" evidence=IMP

GO:0042274 "ribosomal small subunit biogenesis" evidence=IMP

GO:0005730 "nucleolus" evidence=IDA

GO:0003723 "RNA binding" evidence=NAS

GO:0005634 "nucleus" evidence=IDA

GO:0030529 "ribonucleoprotein complex" evidence=IDA

GO:0000184 "nuclear-transcribed mRNA catabolic process, nonsense-mediated decay" evidence=TAS

GO:0005829 "cytosol" evidence=TAS

GO:0006413 "translational initiation" evidence=TAS

GO:0006414 "translational elongation" evidence=TAS

GO:0006415 "translational termination" evidence=TAS

GO:0006614 "SRP-dependent cotranslational protein targeting to membrane" evidence=TAS

GO:0010467 "gene expression" evidence=TAS

GO:0016032 "viral reproduction" evidence=TAS

GO:0016070 "RNA metabolic process" evidence=TAS

GO:0016071 "mRNA metabolic process" evidence=TAS

GO:0019058 "viral infectious cycle" evidence=TAS

GO:0019083 "viral transcription" evidence=TAS

GO:0044267 "cellular protein metabolic process" evidence=TAS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9XET4	RS7_SECCE	No assigned EC number	0.8052	0.9947	0.9895	N/A	no
Q9M885	RS72_ARATH	No assigned EC number	0.7801	1.0	1.0	no	no
Q9ZNS1	RS7_AVIMR	No assigned EC number	0.8157	0.9947	1.0	N/A	no
Q10101	RS7_SCHPO	No assigned EC number	0.5217	0.9528	0.9333	yes	no
P50894	RS7_TAKRU	No assigned EC number	0.5497	0.9738	0.9587	N/A	no
P62082	RS7_MOUSE	No assigned EC number	0.5549	0.9738	0.9587	yes	no
Q8LD03	RS73_ARATH	No assigned EC number	0.7978	0.9842	0.9894	yes	no
Q9VA91	RS7_DROME	No assigned EC number	0.5027	0.9371	0.9226	yes	no
Q8LJU5	RS7_ORYSJ	No assigned EC number	0.8219	1.0	0.9947	no	no
P62084	RS7_DANRE	No assigned EC number	0.5445	0.9738	0.9587	yes	no
Q5RT64	RS7_FELCA	No assigned EC number	0.5549	0.9738	0.9587	N/A	no
P62083	RS7_RAT	No assigned EC number	0.5549	0.9738	0.9587	yes	no
P62081	RS7_HUMAN	No assigned EC number	0.5549	0.9738	0.9587	yes	no
Q90YR7	RS7_ICTPU	No assigned EC number	0.5602	0.9738	0.9587	N/A	no
Q9C514	RS71_ARATH	No assigned EC number	0.7748	1.0	1.0	no	no
Q54I41	RS7_DICDI	No assigned EC number	0.5434	0.9424	0.9326	yes	no
Q23312	RS7_CAEEL	No assigned EC number	0.5227	0.8848	0.8711	yes	no
P48164	RS7B_YEAST	No assigned EC number	0.5172	0.9005	0.9052	yes	no
Q962S0	RS7_SPOFR	No assigned EC number	0.5189	0.9371	0.9421	N/A	no
P33514	RS7_ANOGA	No assigned EC number	0.5189	0.9371	0.9322	yes	no
P48155	RS7_MANSE	No assigned EC number	0.5081	0.9371	0.9421	N/A	no
Q9NB21	RS7_CULQU	No assigned EC number	0.5189	0.9371	0.9322	N/A	no
Q9XH45	RS7_BRAOL	No assigned EC number	0.7894	0.9947	0.9947	N/A	no
A6H769	RS7_BOVIN	No assigned EC number	0.5549	0.9738	0.9587	yes	no
Q949H0	RS7_HORVU	No assigned EC number	0.8105	0.9895	0.9895	N/A	no
P02362	RS7_XENLA	No assigned EC number	0.5602	0.9738	0.9587	N/A	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	191
pfam01251	189	pfam01251, Ribosomal_S7e, Ribosomal protein S7e	1e-105
PTZ00389	184	PTZ00389, PTZ00389, 40S ribosomal protein S7; Prov	2e-70

>gnl|CDD|216389 pfam01251, Ribosomal_S7e, Ribosomal protein S7e

 Score =  299 bits (768), Expect = e-105
 Identities = 120/189 (63%), Positives = 153/189 (80%), Gaps = 3/189 (1%)

Query: 6   KKIQKDKDAEPTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKAIVVYV 65
            KI K K ++P+E E +VAQALFDLE+ + +LK++L+DL I  A +++V G +KA+V++V
Sbjct: 1   NKIIKPKGSKPSELELSVAQALFDLESNSPDLKAELRDLQITSAKEIEVGGGKKAVVIFV 60

Query: 66  PYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQ---RPRSRTLTAV 122
           P    KAYRKI  RLVRELEKKFSGK VV +A RRI+  PK+ S  Q   RPRSRTLTAV
Sbjct: 61  PVPQLKAYRKIQQRLVRELEKKFSGKHVVFVAQRRILPKPKRKSRYQKQKRPRSRTLTAV 120

Query: 123 HDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRKLTGKDV 182
           HDA+LED+VYPAEIVGKR+RYRLDGSK+IK+FLD K++ N E+KL+SFS VY+KLTGKDV
Sbjct: 121 HDAILEDLVYPAEIVGKRIRYRLDGSKLIKVFLDSKDQTNVEHKLDSFSAVYKKLTGKDV 180

Query: 183 VFDYPITDA 191
           VF++P T+A
Sbjct: 181 VFEFPETNA 189

Length = 189

>gnl|CDD|185592 PTZ00389, PTZ00389, 40S ribosomal protein S7; Provisional

 Score =  211 bits (539), Expect = 2e-70
 Identities = 103/185 (55%), Positives = 145/185 (78%), Gaps = 3/185 (1%)

Query: 8   IQKDKDAEPTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGN-RKAIVVYVP 66
           I+K K AEP+E E+ VA+ALF+LE ++++LK+DLK+L I+   ++ V  + +KA+VV+VP
Sbjct: 1   IKKLKKAEPSELEKQVAKALFELEASSKDLKADLKNLKISSVKEVTVGKDKKKAVVVFVP 60

Query: 67  YRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQ-RPRSRTLTAVHDA 125
           YR+   YRKI  +L+ ELEKK   K VV++A R I++ P K   ++ RPRSRTLTAVH+A
Sbjct: 61  YRMLMIYRKIQRKLIPELEKKL-KKHVVIVAQRTILKKPVKNYKLKTRPRSRTLTAVHEA 119

Query: 126 MLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRKLTGKDVVFD 185
           +LED+VYP+EIVGKR R R+DGSK++K+FLDPK+R N E KL++FS VY+KLTG+DVVF+
Sbjct: 120 ILEDLVYPSEIVGKRTRVRVDGSKLLKVFLDPKDRKNVEEKLDAFSAVYKKLTGRDVVFE 179

Query: 186 YPITD 190
           +P   
Sbjct: 180 FPWDP 184

Length = 184

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	191
PF01251	189	Ribosomal_S7e: Ribosomal protein S7e; InterPro: IP	100.0
KOG3320	192	consensus 40S ribosomal protein S7 [Translation, r	100.0
PTZ00389	184	40S ribosomal protein S7; Provisional	100.0
PRK06418	166	transcription elongation factor NusA-like protein;	99.79
TIGR01618	220	phage_P_loop phage nucleotide-binding protein. Thi	82.12

>PF01251 Ribosomal_S7e: Ribosomal protein S7e; InterPro: IPR000554 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms

Probab=100.00  E-value=1.3e-96  Score=617.55  Aligned_cols=185  Identities=62%  Similarity=0.971  Sum_probs=154.6

Q ss_pred             cccccCCCCCCCHHHHHHHHHhHhhhcCChHHHhcCcceeeeeeEEEEecCCeeEEEEEeehhhHHHHHHHHHHHHHHHH
Q 029596            6 KKIQKDKDAEPTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELE   85 (191)
Q Consensus         6 ~Ki~k~~~~~p~e~E~~Vaqal~dLE~~~~dLK~~L~~l~i~~akei~v~~~kkAivIfVP~~~lk~f~Kiq~rLv~ELE   85 (191)
                      +||+|++|++|||||.+|||||+|||++++|||++|++|+|++||||||++|+||||||||||||++|||||.||++|||
T Consensus         1 ~Ki~K~~~~~p~e~E~~Vaqal~dle~~~~dLK~~Lr~L~i~~aKEi~v~~~kKAivIfVP~~~lk~f~KIq~rLv~ELE   80 (189)
T PF01251_consen    1 KKIVKPKGKKPDEFEESVAQALLDLEMNSSDLKAQLRELYITSAKEIEVGGGKKAIVIFVPVPQLKAFQKIQVRLVRELE   80 (189)
T ss_dssp             ---SS---SS--CHHHHHHHHHHHHCHCHCHHCCCCCC--ECEEEEEEECTCEEEEEEEE-CCCCHHHHHHCHHHHHHHH
T ss_pred             CCccccCCCCCCHHHHHHHHHHHHHHcCcHHHHhhccccEEEEEEEEEECCCcEEEEEEEcHHHHHHHHHHHHHHHHHHH
Confidence            48999999999999999999999999877799999999999999999999999999999999999999999999999999


Q ss_pred             hhcCCCeEEEEeeecccCCCCCC----CccccCCCcchhhhhHhhhhcccccceeeceeEEEeeCCceEEEEEeCccccc
Q 029596           86 KKFSGKDVVLIATRRIVRPPKKG----SAVQRPRSRTLTAVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERN  161 (191)
Q Consensus        86 KKfsg~~Vv~vAqRrIl~kp~~~----~~q~RPRSRTLTaVhdaiLeDlV~P~eIVGKR~r~r~DGsk~~KV~LD~kd~~  161 (191)
                      |||||+||||||||||+|||+++    .+|+|||||||||||||||||||||+|||||||||++|||+++|||||++|||
T Consensus        81 KKfsgk~Vv~iAqRrIl~kp~r~~~~~~~qkrPRSRTLTaVhdaILeDLV~PseIVGKRir~rlDGskl~KV~LD~k~~~  160 (189)
T PF01251_consen   81 KKFSGKHVVFIAQRRILPKPTRKSRQKQKQKRPRSRTLTAVHDAILEDLVYPSEIVGKRIRVRLDGSKLIKVHLDKKDQN  160 (189)
T ss_dssp             HCTTTCEEEEEE------SS-SSS---TTS---CCCSHHHHHHHHHHHHTTTS-ECEEEEEE-TTS-EEEEEEEECCCCH
T ss_pred             hhcCCCeEEEeccceEcCCCCcCccccccccCcCCcchHHHHHHHHHhhccHHHhheeeEEEecCCCEEEEEEEChHHcc
Confidence            99999999999999999999877    47999999999999999999999999999999999999999999999999999


Q ss_pred             chhhhhhhHHHHHhhhcCCceEEECCCCC
Q 029596          162 NTEYKLESFSGVYRKLTGKDVVFDYPITD  190 (191)
Q Consensus       162 ~ve~Kldtfs~VYkkLTgk~v~FeFp~~~  190 (191)
                      ++|||||||++|||+||||||+||||+++
T Consensus       161 ~ve~Kl~tfs~VYkkLTgK~v~FeFp~~~  189 (189)
T PF01251_consen  161 NVEHKLDTFSAVYKKLTGKDVVFEFPEQE  189 (189)
T ss_dssp             HHHCCHHHHHHHHHHHCS-EEEEEEE---
T ss_pred             cHHHHHHHHHHHHHHHcCCceEEEcCCCC
Confidence            99999999999999999999999999864

The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRNA, is then transferred to aminoacyl-tRNA and the new peptidyl-tRNA, extended by one residue, is translocated to the P site with the aid the elongation factor G (EF-G) and GTP as the deacylated tRNA is released from the ribosome through one or more exit sites [, ]. About 2/3 of the mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance with the subunit of the ribosome which they belong to - the small (S1 to S31) and the large (L1 to L44). Usually they decorate the rRNA cores of the subunits. Many ribosomal proteins, particularly those of the large subunit, are composed of a globular, surfaced-exposed domain with long finger-like projections that extend into the rRNA core to stabilise its structure. Most of the proteins interact with multiple RNA elements, often from different domains. In the large subunit, about 1/3 of the 23S rRNA nucleotides are at least in van der Waal's contact with protein, and L22 interacts with all six domains of the 23S rRNA. Proteins S4 and S7, which initiate assembly of the 16S rRNA, are located at junctions of five and four RNA helices, respectively. In this way proteins serve to organise and stabilise the rRNA tertiary structure. While the crucial activities of decoding and peptide transfer are RNA based, proteins play an active role in functions that may have evolved to streamline the process of protein synthesis. In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome [, ]. A number of eukaryotic ribosomal proteins can be grouped on the basis of sequence similarities []. One of these families consists of Xenopus S8, and mammalian, insect and yeast S7. These proteins have about 200 amino acids.; GO: 0003735 structural constituent of ribosome, 0006412 translation, 0005622 intracellular, 0005840 ribosome; PDB: 2XZN_3 2XZM_3 3U5G_H 3U5C_H.

>KOG3320 consensus 40S ribosomal protein S7 [Translation, ribosomal structure and biogenesis]

Probab=100.00  E-value=1.5e-92  Score=590.12  Aligned_cols=190  Identities=59%  Similarity=0.928  Sum_probs=187.2

Q ss_pred             CCccccccccCCCCCCCHHHHHHHHHhHhhhcCChHHHhcCcceeeeeeEEEEecCCeeEEEEEeehhhHHHHHHHHHHH
Q 029596            1 MFTTKKKIQKDKDAEPTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKAIVVYVPYRLRKAYRKIHSRL   80 (191)
Q Consensus         1 m~~~~~Ki~k~~~~~p~e~E~~Vaqal~dLE~~~~dLK~~L~~l~i~~akei~v~~~kkAivIfVP~~~lk~f~Kiq~rL   80 (191)
                      ||++.+||+|++|+.|||||.+|||||+|||++|+|||++|++|||++|+||||+||+||||||||+|+|++|||||.||
T Consensus         1 m~s~~~Ki~k~~~~~ptE~E~~iaqal~~le~~n~~lk~~lr~L~I~~a~eiev~Gg~Kaivi~VP~p~lk~fqki~~~L   80 (192)
T KOG3320|consen    1 MFSSQAKIHKPSGSKPTEFEMQIAQALLDLEMDNSDLKAQLRELNITSAKEIEVGGGRKAIVIFVPVPQLKAFQKIQVRL   80 (192)
T ss_pred             CccccccccCCCCCCchHHHHHHHHHHHHHHhcchhhHHHhhhheeeeeEEEEecCCcEEEEEEechHHHHHHHHHHHHH
Confidence            89999999999999999999999999999999899999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhcCCCeEEEEeeecccCCCCCCCc-cccCCCcchhhhhHhhhhcccccceeeceeEEEeeCCceEEEEEeCccc
Q 029596           81 VRELEKKFSGKDVVLIATRRIVRPPKKGSA-VQRPRSRTLTAVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKE  159 (191)
Q Consensus        81 v~ELEKKfsg~~Vv~vAqRrIl~kp~~~~~-q~RPRSRTLTaVhdaiLeDlV~P~eIVGKR~r~r~DGsk~~KV~LD~kd  159 (191)
                      +|||||||||+||+|||+|||+|+|++++. |||||||||||||||||||+|||+|||||||||++||++++|||||++|
T Consensus        81 vreleKKF~gk~Vifia~Rrilpkp~rks~~qKRprsrtltaVhdaiLed~vfP~eIvGkR~rv~ldg~ki~kV~LD~~~  160 (192)
T KOG3320|consen   81 VRELEKKFSGKHVIFIAQRRILPKPTRKSRTQKRPRSRTLTAVHDAILEDLVFPAEIVGKRTRVKLDGSKLVKVHLDKKQ  160 (192)
T ss_pred             HHHHHHhcCCceEEEEEeeeeccCCCCCcccccCCccchHHHHHHHHHHhccchhhhcceeEEEEecCcEEEEEEechhh
Confidence            999999999999999999999999999987 8999999999999999999999999999999999999999999999999


Q ss_pred             ccchhhhhhhHHHHHhhhcCCceEEECCCCC
Q 029596          160 RNNTEYKLESFSGVYRKLTGKDVVFDYPITD  190 (191)
Q Consensus       160 ~~~ve~Kldtfs~VYkkLTgk~v~FeFp~~~  190 (191)
                      +|++|||+|+|++||++||||||+||||...
T Consensus       161 ~n~~e~K~e~f~~vy~kLtGKdv~fEfp~~~  191 (192)
T KOG3320|consen  161 QNNVEHKVETFSAVYKKLTGKDVVFEFPEFT  191 (192)
T ss_pred             ccchHHhHHHHHHHHHHhcCCceEEecCccc
Confidence            9999999999999999999999999999764

>PTZ00389 40S ribosomal protein S7; Provisional

Probab=100.00  E-value=1.3e-89  Score=573.66  Aligned_cols=182  Identities=57%  Similarity=0.936  Sum_probs=177.6

Q ss_pred             cccCCCCCCCHHHHHHHHHhHhhhcCChHHHhcCcceeeeeeEEEEecCC-eeEEEEEeehhhHHHHHHHHHHHHHHHHh
Q 029596            8 IQKDKDAEPTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGN-RKAIVVYVPYRLRKAYRKIHSRLVRELEK   86 (191)
Q Consensus         8 i~k~~~~~p~e~E~~Vaqal~dLE~~~~dLK~~L~~l~i~~akei~v~~~-kkAivIfVP~~~lk~f~Kiq~rLv~ELEK   86 (191)
                      +.|++|++|||||.+|||||+|||++|+|||++|++|||++||||||++| ||||||||||||+++|||||.||++||||
T Consensus         1 ~~k~~~~~p~e~E~~vaqal~~le~~~~dlK~~L~~L~i~~akei~v~~~~kkaivIfVP~~~lk~~~kiq~rLv~ELEK   80 (184)
T PTZ00389          1 IKKLKKAEPSELEKQVAKALFELEASSKDLKADLKNLKISSVKEVTVGKDKKKAVVVFVPYRMLMIYRKIQRKLIPELEK   80 (184)
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHhCcHHHHhhhhccEEeeEEEEEecCCCcEEEEEEecHHHHHHHHHHHHHHHHHHHH
Confidence            46889999999999999999999999999999999999999999999877 99999999999999999999999999999


Q ss_pred             hcCCCeEEEEeeecccCCCCCCCc-cccCCCcchhhhhHhhhhcccccceeeceeEEEeeCCceEEEEEeCcccccchhh
Q 029596           87 KFSGKDVVLIATRRIVRPPKKGSA-VQRPRSRTLTAVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEY  165 (191)
Q Consensus        87 Kfsg~~Vv~vAqRrIl~kp~~~~~-q~RPRSRTLTaVhdaiLeDlV~P~eIVGKR~r~r~DGsk~~KV~LD~kd~~~ve~  165 (191)
                      || |+||+|||||||+|+|+++++ |+|||||||||||||||+|||||+|||||||||++|||+++||+||++|++++||
T Consensus        81 K~-g~~Vv~ia~RrIl~kp~r~~~~q~rPrSRTLTaVhdaiLeDLvyPaeIvGkRir~~~DGsk~~KV~Ld~~d~~~ve~  159 (184)
T PTZ00389         81 KL-KKHVVIVAQRTILKKPVKNYKLKTRPRSRTLTAVHEAILEDLVYPSEIVGKRTRVRVDGSKLLKVFLDPKDRKNVEE  159 (184)
T ss_pred             Hh-CCeEEEEEEEEEcCCCCcCccccCCCCccchHHHHHHHHHHhccchheeeeEEEEecCCcEEEEEEeCHHHhcccch
Confidence            99 999999999999999999886 9999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhHHHHHhhhcCCceEEECCCCC
Q 029596          166 KLESFSGVYRKLTGKDVVFDYPITD  190 (191)
Q Consensus       166 Kldtfs~VYkkLTgk~v~FeFp~~~  190 (191)
                      |+|+|++||++|||+||+||||+++
T Consensus       160 Kletf~~VykkLTgkdV~fefp~~~  184 (184)
T PTZ00389        160 KLDAFSAVYKKLTGRDVVFEFPWDP  184 (184)
T ss_pred             hHHHHHHHHHHHhCCCeEEEecCCC
Confidence            9999999999999999999999864

>PRK06418 transcription elongation factor NusA-like protein; Validated

Probab=99.79  E-value=8.8e-19  Score=145.12  Aligned_cols=138  Identities=23%  Similarity=0.390  Sum_probs=108.5

Q ss_pred             CCCHHHHHHHHHhHhhhcCChHHHhcCcceeeeeeEEEEecCCeeEEEEEe-ehhhHHHHHHHHHHHHHHHHhhcCCCeE
Q 029596           15 EPTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKAIVVYV-PYRLRKAYRKIHSRLVRELEKKFSGKDV   93 (191)
Q Consensus        15 ~p~e~E~~Vaqal~dLE~~~~dLK~~L~~l~i~~akei~v~~~kkAivIfV-P~~~lk~f~Kiq~rLv~ELEKKfsg~~V   93 (191)
                      .-+++|-.|+.+|++||.+     ..|++..+-.|-++  ++ +  |++.| |=. =.+..| -...++.|++++ ||+|
T Consensus        27 ~v~~~dv~i~~~l~~l~~~-----~~l~~~~~~k~~~~--dd-r--vIfvV~~gd-g~aIGk-~G~~ik~l~~~l-gk~V   93 (166)
T PRK06418         27 EVTELDVEVSKVLLKLEED-----KELKDVEYKKAYEV--DD-L--VILLVTSGP-RIPIGK-GGKIAKALSRKL-GKKV   93 (166)
T ss_pred             ceEEeehHHHHHHHHhhcc-----ccccCceEEEEEEe--CC-E--EEEEEeCCC-cccccc-cchHHHHHHHHh-CCcE
Confidence            5789999999999999833     34566666555554  32 2  22222 222 223333 467888899999 8898


Q ss_pred             EEEeeecccCCCCCCCccccCCCcchhhhhHhhhhcccccceeeceeEEEeeCCceEEEEEeCcccccchhhhhhhHHHH
Q 029596           94 VLIATRRIVRPPKKGSAVQRPRSRTLTAVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFSGV  173 (191)
Q Consensus        94 v~vAqRrIl~kp~~~~~q~RPRSRTLTaVhdaiLeDlV~P~eIVGKR~r~r~DGsk~~KV~LD~kd~~~ve~Kldtfs~V  173 (191)
                      =+|--                 |-+    -+.+|+||+||++|+|+|++++.||+..+||++|++|++++++|+++|++|
T Consensus        94 evVE~-----------------s~d----~~~fl~Nl~~PA~V~gV~i~~~~dG~~~~kV~Vd~~Dk~~l~~k~e~~~~v  152 (166)
T PRK06418         94 RVVEK-----------------TND----IKKLAVQLLSPARVLGVNTVWLPDGTVQYVIRVSRRDRRRLPAKPELLESI  152 (166)
T ss_pred             EEEEc-----------------CCC----HHHHHHhcCCCcEEEEEEEEEeCCCcEEEEEEECHHHhhcccccHHHHHHH
Confidence            77751                 111    467999999999999999999999999999999999999999999999999


Q ss_pred             HhhhcCCceEEEC
Q 029596          174 YRKLTGKDVVFDY  186 (191)
Q Consensus       174 YkkLTgk~v~FeF  186 (191)
                      |++|||++|.|+|
T Consensus       153 ~~kltgk~v~~~f  165 (166)
T PRK06418        153 LSKITGTEVKIRV  165 (166)
T ss_pred             HHHHHCCcEEEEe
Confidence            9999999999998

>TIGR01618 phage_P_loop phage nucleotide-binding protein

Probab=82.12  E-value=8.1  Score=33.37  Aligned_cols=93  Identities=19%  Similarity=0.286  Sum_probs=60.7

Q ss_pred             hhHHHHHHHHHHHH---HHHHhhcCCCeEEEEeeecccCCCCCCCccccCCCcchhhhhHhhhhcccccceeeceeEEEe
Q 029596           68 RLRKAYRKIHSRLV---RELEKKFSGKDVVLIATRRIVRPPKKGSAVQRPRSRTLTAVHDAMLEDVVYPAEIVGKRVRYR  144 (191)
Q Consensus        68 ~~lk~f~Kiq~rLv---~ELEKKfsg~~Vv~vAqRrIl~kp~~~~~q~RPRSRTLTaVhdaiLeDlV~P~eIVGKR~r~r  144 (191)
                      +.+..|.+.+.+++   ..| +- .|++|+|+|.+.+-..+ -  .--.+.+|=....++.+.+.+.--+++|| |+.+.
T Consensus       110 ~~~~~yg~~~~~fl~~l~~L-~~-~g~nII~tAhe~~~~~~-d--e~G~~~~r~~P~i~~K~~n~l~G~~DvV~-rl~i~  183 (220)
T TIGR01618       110 PELQHYQKLDLWFLDLLTVL-KE-SNKNIYATAWELTNQSS-G--ESGQIYNRYQPDIREKVLNAFLGLTDVVG-RIVLN  183 (220)
T ss_pred             cccccHHHHHHHHHHHHHHH-Hh-CCCcEEEEEeecccccc-C--CCCCCcceechhhhhhHHHhhcccccEEE-EEEEc
Confidence            35678888876654   555 23 59999999999642111 0  11224455666778888889999999999 55554


Q ss_pred             e-CCceEEEEEeCcccccchhhhhh
Q 029596          145 L-DGSKIIKIFLDPKERNNTEYKLE  168 (191)
Q Consensus       145 ~-DGsk~~KV~LD~kd~~~ve~Kld  168 (191)
                      - +|.|.+  .+++.+...-.++||
T Consensus       184 ~~~g~R~~--~~~~~~~~~AKNrld  206 (220)
T TIGR01618       184 GETGERGF--ILDPSKGNYAKNRLD  206 (220)
T ss_pred             cCCCceEE--EECCCCCcccccccc
Confidence            4 567655  567766655555554

This model represents an uncharacterized family of proteins from a number of phage of Gram-positive bacteria. This protein contains a P-loop motif, G/A-X-X-G-X-G-K-T near its amino end. The function of this protein is unknown.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	191
3u5c_H	190	The Structure Of The Eukaryotic Ribosome At 3.0 A R		9e-46
3zey_4	202	High-resolution Cryo-electron Microscopy Structure		4e-32
2xzm_3	197	Crystal Structure Of The Eukaryotic 40s Ribosomal S		5e-23

>pdb|3U5C|H Chain H, The Structure Of The Eukaryotic Ribosome At 3.0 A Resolution. This Entry Contains Proteins Of The 40s Subunit, Ribosome A Length = 190

Iteration: 1
 Score =  179 bits (454), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 88/174 (50%), Positives = 121/174 (69%), Gaps = 2/174 (1%)
Query: 16  PTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKAIVVYVPYRLRKAYRK 75
           PTE E  VAQA  +LEN++ ELK++L+ L      ++DV+G +KA+ ++VP      + K
Sbjct: 13  PTELELQVAQAFVELENSSPELKAELRPLQFKSIREIDVAGGKKALAIFVPVPSLAGFHK 72
Query: 76  IHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGS--AVQRPRSRTLTAVHDAMLEDVVYP 133
           + ++L RELEKKF  + V+ +A RRI+  P + S    +RPRSRTLTAVHD +LED+V+P
Sbjct: 73  VQTKLTRELEKKFQDRHVIFLAERRILPKPSRTSRQVQKRPRSRTLTAVHDKILEDLVFP 132
Query: 134 AEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRKLTGKDVVFDYP 187
            EIVGKRVRY + G+KI K+ LD K+    +YKLESF  VY KLTGK +VF+ P
Sbjct: 133 TEIVGKRVRYLVGGNKIQKVLLDSKDVQQIDYKLESFQAVYNKLTGKQIVFEIP 186

>pdb|3ZEY|4 Chain 4, High-resolution Cryo-electron Microscopy Structure Of The Trypanosoma Brucei Ribosome Length = 202

Iteration: 1
 Score =  134 bits (336), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 72/183 (39%), Positives = 114/183 (62%), Gaps = 2/183 (1%)
Query: 6   KKIQKDKDAEPTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRK-AIVVY 64
           +K++K K A P++ EE+VA+ LF+LE +++ L++ L   +IN         ++K A+++ 
Sbjct: 8   RKLRKLKRANPSQEEESVARVLFELEGSHKTLRAQLPRFHINTVRTSSSPRHKKTAMIIL 67
Query: 65  VPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQR-PRSRTLTAVH 123
            P R     RKI   L  ELEK+F G  VVL+A R+I + P     +Q+  RSRT  AV 
Sbjct: 68  YPLRFIMLVRKIQRTLTAELEKRFPGNIVVLVAQRKITKRPNDVYKLQQVQRSRTSVAVF 127
Query: 124 DAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRKLTGKDVV 183
           + +L D++YP ++VG+R RYR DGSK++K+FLD ++R   E +L   + VY+ LT + V 
Sbjct: 128 ENILNDLIYPCDVVGRRWRYRTDGSKLMKVFLDARDRKRVESRLPLLAHVYKLLTHRTVT 187
Query: 184 FDY 186
           F +
Sbjct: 188 FGF 190

>pdb|2XZM|3 Chain 3, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit In Complex With Initiation Factor 1. This File Contains The 40s Subunit And Initiation Factor For Molecule 1 Length = 197

Iteration: 1
 Score =  103 bits (257), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 60/176 (34%), Positives = 108/176 (61%), Gaps = 8/176 (4%)
Query: 17  TEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRK----AIVVYVPYRLRKA 72
           T+ EE V  AL +L+NT+ +LK+ L+ + + Q  +  ++   K    A+++YV ++  + 
Sbjct: 13  TKIEEQVGSALVELQNTHPDLKTSLESIILTQVKEFQINKTNKKAKSAVLIYVHFQSYRV 72
Query: 73  YRKIHSRLVRELEKKFSGKDVVLIATRRIVRPP--KKGSAVQRPRSRTLTAVHDAMLEDV 130
                 +L+ ELEKK   K +V    +R +     K+  + QRPRSR LT V+DA+L+D+
Sbjct: 73  LLSAARKLIIELEKKL--KQIVFFTAQRKIESKWVKEHKSQQRPRSRCLTYVYDALLDDL 130
Query: 131 VYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRKLTGKDVVFDY 186
           + P+ ++GKR+R RLDG+   +I LD  +R+  E KL++ + +Y+ +T ++V F++
Sbjct: 131 LLPSTLIGKRIRARLDGTSFYRIQLDQNDRDFLEEKLDAITHIYKTVTTREVTFEF 186

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	191
3u5c_H	190	RP30, RP40, 40S ribosomal protein S7-A; translatio	9e-84
2xzm_3	197	RPS7E, 40S ribosomal protein RPS7E; ribosome, tran	4e-77

>3u5c_H RP30, RP40, 40S ribosomal protein S7-A; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3u5g_H Length = 190

 Score =  244 bits (625), Expect = 9e-84
 Identities = 91/191 (47%), Positives = 125/191 (65%), Gaps = 5/191 (2%)

Query: 1   MFTTKKKIQKDKDAEPTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKA 60
           M   + KI       PTE E  VAQA  +LEN++ ELK++L+ L      ++DV+G +KA
Sbjct: 1   MSAPQAKILSQA---PTELELQVAQAFVELENSSPELKAELRPLQFKSIREIDVAGGKKA 57

Query: 61  IVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGS--AVQRPRSRT 118
           + ++VP      + K+ ++L RELEKKF  + V+ +A RRI+  P + S    +RPRSRT
Sbjct: 58  LAIFVPVPSLAGFHKVQTKLTRELEKKFQDRHVIFLAERRILPKPSRTSRQVQKRPRSRT 117

Query: 119 LTAVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRKLT 178
           LTAVHD +LED+V+P EIVGKRVRY + G+KI K+ LD K+    +YKLESF  VY KLT
Sbjct: 118 LTAVHDKILEDLVFPTEIVGKRVRYLVGGNKIQKVLLDSKDVQQIDYKLESFQAVYNKLT 177

Query: 179 GKDVVFDYPIT 189
           GK +VF+ P  
Sbjct: 178 GKQIVFEIPSE 188

>2xzm_3 RPS7E, 40S ribosomal protein RPS7E; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_3 Length = 197

 Score =  228 bits (582), Expect = 4e-77
 Identities = 63/191 (32%), Positives = 112/191 (58%), Gaps = 8/191 (4%)

Query: 5   KKKIQKDKDAEPTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRK----A 60
             K  K +    T+ EE V  AL +L+NT+ +LK+ L+ + + Q  +  ++   K    A
Sbjct: 3   LAKFHKKQ--SLTKIEEQVGSALVELQNTHPDLKTSLESIILTQVKEFQINKTNKKAKSA 60

Query: 61  IVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIV-RPPKKGSAVQRPRSRTL 119
           +++YV ++  +       +L+ ELEKK   + V   A R+I  +  K+  + QRPRSR L
Sbjct: 61  VLIYVHFQSYRVLLSAARKLIIELEKKLK-QIVFFTAQRKIESKWVKEHKSQQRPRSRCL 119

Query: 120 TAVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRKLTG 179
           T V+DA+L+D++ P+ ++GKR+R RLDG+   +I LD  +R+  E KL++ + +Y+ +T 
Sbjct: 120 TYVYDALLDDLLLPSTLIGKRIRARLDGTSFYRIQLDQNDRDFLEEKLDAITHIYKTVTT 179

Query: 180 KDVVFDYPITD 190
           ++V F++    
Sbjct: 180 REVTFEFKEDK 190

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	191
3u5c_H	190	RP30, RP40, 40S ribosomal protein S7-A; translatio	100.0
2xzm_3	197	RPS7E, 40S ribosomal protein RPS7E; ribosome, tran	100.0

>3u5c_H RP30, RP40, 40S ribosomal protein S7-A; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3u5g_H

Probab=100.00  E-value=8.3e-98  Score=623.52  Aligned_cols=187  Identities=49%  Similarity=0.815  Sum_probs=178.5

Q ss_pred             CCccccccccCCCCCCCHHHHHHHHHhHhhhcCChHHHhcCcceeeeeeEEEEecCCeeEEEEEeehhhHHHHHHHHHHH
Q 029596            1 MFTTKKKIQKDKDAEPTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKAIVVYVPYRLRKAYRKIHSRL   80 (191)
Q Consensus         1 m~~~~~Ki~k~~~~~p~e~E~~Vaqal~dLE~~~~dLK~~L~~l~i~~akei~v~~~kkAivIfVP~~~lk~f~Kiq~rL   80 (191)
                      |++.++||+|++   |||||.+|||||+|||++|+|||++|++|+|++||||||+||+||||||||||||++|||||.||
T Consensus         1 m~~~~~KI~k~~---p~e~E~~vaqal~dLE~~~~dLK~~Lr~L~i~~akEiev~~~kKAivIfVP~p~lk~f~KIq~rL   77 (190)
T 3u5c_H            1 MSAPQAKILSQA---PTELELQVAQAFVELENSSPELKAELRPLQFKSIREIDVAGGKKALAIFVPVPSLAGFHKVQTKL   77 (190)
T ss_dssp             ---CCSSTTCSS---CCSHHHHHHHHHHHHHCSHHHHTTSSSSCCCSCEEEEECTTSCEEEEEEECSSSHHHHHHHTHHH
T ss_pred             CCccccccCCCC---CCHHHHHHHHHHHHHhhCcHHHHHhhhcceeeeEEEEEecCCcEEEEEEecHHHHHHHHHHHHHH
Confidence            665578999996   99999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhcCCCeEEEEeeecccCCCCCCC--ccccCCCcchhhhhHhhhhcccccceeeceeEEEeeCCceEEEEEeCcc
Q 029596           81 VRELEKKFSGKDVVLIATRRIVRPPKKGS--AVQRPRSRTLTAVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPK  158 (191)
Q Consensus        81 v~ELEKKfsg~~Vv~vAqRrIl~kp~~~~--~q~RPRSRTLTaVhdaiLeDlV~P~eIVGKR~r~r~DGsk~~KV~LD~k  158 (191)
                      ++||||||||+||||||||||||||++++  +|+|||||||||||||||||||||+|||||||||++|||+++|||||++
T Consensus        78 vrELEKKfsgkhVvfiAqRrIlpkp~r~~~~kqkRPRSRTLTaVhdaiLeDLv~P~eIVGKRir~rlDGskl~KV~LD~~  157 (190)
T 3u5c_H           78 TRELEKKFQDRHVIFLAERRILPKPSRTSRQVQKRPRSRTLTAVHDKILEDLVFPTEIVGKRVRYLVGGNKIQKVLLDSK  157 (190)
T ss_dssp             HHHHHHTTCSEEEEEEECCCCCCCCCSSSCCCSCCCGGGSHHHHHHHHHHHHSCSSCEEEEEEEECSSSCEEEEEEECSS
T ss_pred             HHHHHhccCCCEEEEEecceEcCCCccCCcccccCCCCCchhHHHHHHHhhcccchheeeeEEEEecCCCEEEEEEECHH
Confidence            99999999999999999999999998876  4999999999999999999999999999999999999999999999999


Q ss_pred             cccchhhhhhhHHHHHhhhcCCceEEECCCCC
Q 029596          159 ERNNTEYKLESFSGVYRKLTGKDVVFDYPITD  190 (191)
Q Consensus       159 d~~~ve~Kldtfs~VYkkLTgk~v~FeFp~~~  190 (191)
                      |||++|||||||++|||+||||||+||||+++
T Consensus       158 ~~~~ve~Kl~tfs~VYkkLTgkdv~FeFp~~~  189 (190)
T 3u5c_H          158 DVQQIDYKLESFQAVYNKLTGKQIVFEIPSET  189 (190)
T ss_dssp             STHHHHTTHHHHHHHHHHHHSCEEEEECCC--
T ss_pred             HhcccchhhHHHHHHHHHhhCCcEEEEecCcc
Confidence            99999999999999999999999999999864

>2xzm_3 RPS7E, 40S ribosomal protein RPS7E; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_3

Probab=100.00  E-value=5.1e-84  Score=543.51  Aligned_cols=185  Identities=34%  Similarity=0.576  Sum_probs=177.2

Q ss_pred             ccccccccCCCCCCCHHHHHHHHHhHhhhcCChHHHhcCcceeeeeeEEEEec-CC---eeEEEEEeehhhHHHHHHHHH
Q 029596            3 TTKKKIQKDKDAEPTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVS-GN---RKAIVVYVPYRLRKAYRKIHS   78 (191)
Q Consensus         3 ~~~~Ki~k~~~~~p~e~E~~Vaqal~dLE~~~~dLK~~L~~l~i~~akei~v~-~~---kkAivIfVP~~~lk~f~Kiq~   78 (191)
                      ||++||+|+  .+|||||.+|||||+|||++++|||++|++|+|++||||||+ +|   +||||||||+|++++|||||.
T Consensus         1 ~a~~ki~k~--~~p~e~E~~VaqaL~dLE~~~~dLK~~l~~l~i~~aKeiev~~~~~k~kkaivIfVP~~~lk~f~kiq~   78 (197)
T 2xzm_3            1 MALAKFHKK--QSLTKIEEQVGSALVELQNTHPDLKTSLESIILTQVKEFQINKTNKKAKSAVLIYVHFQSYRVLLSAAR   78 (197)
T ss_dssp             -CCTTCSSC--SCCCHHHHHHHHHHHHHHHHCSHHHHHHHHCCEEEEEEEEEECTTCCEEEEEEEEECGGGHHHHHHHHH
T ss_pred             CCcccccCC--CCCCHHHHHHHHHHHHHHhcCHHHHHhhhhcceEEEEEEEecCCCCccceEEEEEEccchhhHHHHHHH
Confidence            367899999  799999999999999999888899999999999999999997 66   779999999999999999999


Q ss_pred             HHHHHHHhhcCCCeEEEEeeecccCCCCCC-CccccCCCcchhhhhHhhhhcccccceeeceeEEEeeCCceEEEEEeCc
Q 029596           79 RLVRELEKKFSGKDVVLIATRRIVRPPKKG-SAVQRPRSRTLTAVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDP  157 (191)
Q Consensus        79 rLv~ELEKKfsg~~Vv~vAqRrIl~kp~~~-~~q~RPRSRTLTaVhdaiLeDlV~P~eIVGKR~r~r~DGsk~~KV~LD~  157 (191)
                      ||++|||||| |+||+|||||||+|+|+++ .+|+|||||||||||||||||||||+|||||||||++|||+++||+||+
T Consensus        79 rLvrELEKKf-g~~Vv~ia~RrIl~kp~~~~~~q~rprsrTltaV~~aiLeDLv~PaeIvGkRir~~~DGs~~~KV~Ld~  157 (197)
T 2xzm_3           79 KLIIELEKKL-KQIVFFTAQRKIESKWVKEHKSQQRPRSRCLTYVYDALLDDLLLPSTLIGKRIRARLDGTSFYRIQLDQ  157 (197)
T ss_dssp             HHHHHHHHTT-SSEEEEEECCCCCCSSCCCCTTCCCCGGGSHHHHHHHHHHHHSTTSCCSEEEEEECSSSCEECCEEEES
T ss_pred             HHHHHHHHHh-CCcEEEEecccccCCCcccCccccCCCccchhhhHHHHHHHhccchheeeeEEEEecCCCEEEEEEeCH
Confidence            9999999999 8999999999999999775 5799999999999999999999999999999999999999999999999


Q ss_pred             ccccchhhhhhhHHHHHhhhcCCceEEECCCCC
Q 029596          158 KERNNTEYKLESFSGVYRKLTGKDVVFDYPITD  190 (191)
Q Consensus       158 kd~~~ve~Kldtfs~VYkkLTgk~v~FeFp~~~  190 (191)
                      +|++++|||+|+|++||++|||+||+||||+.+
T Consensus       158 ~d~~~ve~Kletf~~VykkLTGkdV~feFp~~~  190 (197)
T 2xzm_3          158 NDRDFLEEKLDAITHIYKTVTTREVTFEFKEDK  190 (197)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHSCCBCCEEEECCC
T ss_pred             HHhcccccchHHHHHHHHHHhCCCEEEEEcCcc
Confidence            999999999999999999999999999999764

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00