Citrus Sinensis ID: 029599

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-
MRLAAEQAHSANNGLDIAVRLLEPFKEQFPTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSGFEGPWTRNPLIFDNSYFTELLTGEKDGLLQLPSDKALLDDPVFRPLVEKYAADEDAFFADYAEAHLKLSELGFAEA
ccccccccccccccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccHHHHHHHHHHHccccHHHHHHHccccccccccccccccccccccccccccHHHHHHHHccccccccccccHHHHHcccccHHHHHHHHccHHHHHHHHHHHHHHHHHcccccc
HHcHHHHccHHHccHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccHHHHHHHHcccccccHHHHHHHHHHHHccEEcHHHHcccEEccccccccccHHHHHHHccccccccccHHHHHHHHcccHHHHHHHHHHcHHHHHHHHHHHHHHHHccccccc
MRLAAEQAHSANNGLDIAVRLLepfkeqfptisyaDLYQLAGVVGvevtggpdipfhpgrddkaeppqegrlpdakqgnDHLRQVFGaqmglsdkdivalsgghtlgrchkersgfegpwtrnplifdnsyFTELLTgekdgllqlpsdkallddpvfrplVEKYAADEDAFFADYAEAHLKLSELGFAEA
MRLAAEqahsanngLDIAVRLLEPFKEQFPTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTlgrchkersgfegpwtrnpLIFDNSYFTELLTGEKDGLLQLPSDKALLDDPVFRPLVEKYAADEDAFFADYAEAHLKLSELGFAEA
MRLAAEQAHSANNGLDIAVRLLEPFKEQFPTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSGFEGPWTRNPLIFDNSYFTELLTGEKDGLLQLPSDKALLDDPVFRPLVEKyaadedaffadyaeaHLKLSELGFAEA
*************GLDIAVRLLEPFKEQFPTISYADLYQLAGVVGVEVTGGP********************************VFGAQMGLSDKDIVALSGGHTLGRCHKERSGFEGPWTRNPLIFDNSYFTELLTGEKDGLLQLPSDKALLDDPVFRPLVEKYAADEDAFFADYAEAHLKLS*******
MRLAAEQAHSANNGLDIAVRLLEPFKEQFPTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQ*GRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSGFEGPWTRNPLIFDNSYFTELLTGEKDGLLQLPSDKALLDDPVFRPLVEKYAADEDAFFADYAEAHLKLSELGF***
*********SANNGLDIAVRLLEPFKEQFPTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSGFEGPWTRNPLIFDNSYFTELLTGEKDGLLQLPSDKALLDDPVFRPLVEKYAADEDAFFADYAEAHLKLSELGFAEA
MRLAAEQAHSANNGLDIAVRLLEPFKEQFPTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSGFEGPWTRNPLIFDNSYFTELLTGEKDGLLQLPSDKALLDDPVFRPLVEKYAADEDAFFADYAEAHLKLSELGFA**
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MRLAAEQAHSANNGLDIAVRLLEPFKEQFPTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSGFEGPWTRNPLIFDNSYFTELLTGEKDGLLQLPSDKALLDDPVFRPLVEKYAADEDAFFADYAEAHLKLSELGFAEA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query191 2.2.26 [Sep-21-2011]
Q9FE01251 L-ascorbate peroxidase 2, yes no 0.994 0.756 0.836 3e-91
P48534250 L-ascorbate peroxidase, c N/A no 1.0 0.764 0.837 9e-91
Q10N21250 L-ascorbate peroxidase 1, no no 1.0 0.764 0.821 2e-90
A2XFC7250 L-ascorbate peroxidase 1, N/A no 1.0 0.764 0.816 2e-89
Q05431250 L-ascorbate peroxidase 1, yes no 1.0 0.764 0.821 2e-89
Q1PER6251 L-ascorbate peroxidase 2, no no 0.989 0.752 0.794 9e-84
Q42564287 L-ascorbate peroxidase 3, no no 0.979 0.651 0.707 7e-70
Q6ZJJ1291 Probable L-ascorbate pero no no 0.984 0.646 0.677 2e-68
Q0JEQ2291 Probable L-ascorbate pero no no 0.984 0.646 0.661 3e-68
Q01MI9291 Probable L-ascorbate pero N/A no 0.984 0.646 0.661 4e-68
>sp|Q9FE01|APX2_ORYSJ L-ascorbate peroxidase 2, cytosolic OS=Oryza sativa subsp. japonica GN=APX2 PE=1 SV=1 Back     alignment and function desciption
 Score =  334 bits (856), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 159/190 (83%), Positives = 172/190 (90%)

Query: 1   MRLAAEQAHSANNGLDIAVRLLEPFKEQFPTISYADLYQLAGVVGVEVTGGPDIPFHPGR 60
           M+   EQ+H+AN GLDIAVRLL+P K+Q P +SYAD YQLAGVV VEVTGGP++PFHPGR
Sbjct: 61  MKNPGEQSHAANAGLDIAVRLLDPIKDQLPILSYADFYQLAGVVAVEVTGGPEVPFHPGR 120

Query: 61  DDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSGFEGPW 120
            DK EPP EGRLPDA QG+DHLRQVF AQMGLSDKDIVALSGGHTLGRCHKERSGFEG W
Sbjct: 121 QDKPEPPPEGRLPDATQGSDHLRQVFSAQMGLSDKDIVALSGGHTLGRCHKERSGFEGAW 180

Query: 121 TRNPLIFDNSYFTELLTGEKDGLLQLPSDKALLDDPVFRPLVEKYAADEDAFFADYAEAH 180
           T NPLIFDNSYFTEL++GEK+GLLQLPSDKAL+ DP FRPLVEKYAADEDAFFADYAEAH
Sbjct: 181 TSNPLIFDNSYFTELVSGEKEGLLQLPSDKALMADPAFRPLVEKYAADEDAFFADYAEAH 240

Query: 181 LKLSELGFAE 190
           LKLSELGFAE
Sbjct: 241 LKLSELGFAE 250
Plays a key role in hydrogen peroxide removal.
Oryza sativa subsp. japonica (taxid: 39947)
EC: 1EC: .EC: 1EC: 1EC: .EC: 1EC: .EC: 1EC: 1
>sp|P48534|APX1_PEA L-ascorbate peroxidase, cytosolic OS=Pisum sativum GN=APX1 PE=1 SV=2 Back     alignment and function description
>sp|Q10N21|APX1_ORYSJ L-ascorbate peroxidase 1, cytosolic OS=Oryza sativa subsp. japonica GN=APX1 PE=1 SV=1 Back     alignment and function description
>sp|A2XFC7|APX1_ORYSI L-ascorbate peroxidase 1, cytosolic OS=Oryza sativa subsp. indica GN=APX1 PE=2 SV=1 Back     alignment and function description
>sp|Q05431|APX1_ARATH L-ascorbate peroxidase 1, cytosolic OS=Arabidopsis thaliana GN=APX1 PE=1 SV=2 Back     alignment and function description
>sp|Q1PER6|APX2_ARATH L-ascorbate peroxidase 2, cytosolic OS=Arabidopsis thaliana GN=APX2 PE=2 SV=3 Back     alignment and function description
>sp|Q42564|APX3_ARATH L-ascorbate peroxidase 3, peroxisomal OS=Arabidopsis thaliana GN=APX3 PE=1 SV=1 Back     alignment and function description
>sp|Q6ZJJ1|APX4_ORYSJ Probable L-ascorbate peroxidase 4 OS=Oryza sativa subsp. japonica GN=APX4 PE=2 SV=1 Back     alignment and function description
>sp|Q0JEQ2|APX3_ORYSJ Probable L-ascorbate peroxidase 3 OS=Oryza sativa subsp. japonica GN=APX3 PE=2 SV=1 Back     alignment and function description
>sp|Q01MI9|APX3_ORYSI Probable L-ascorbate peroxidase 3 OS=Oryza sativa subsp. indica GN=APX3 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query191
221327589250 ascorbate peroxidase 2 [Citrus maxima] 1.0 0.764 1.0 1e-107
300837175250 ascorbate peroxidase [Citrus limon] 1.0 0.764 0.994 1e-106
37783265250 ascorbate peroxidase [Ipomoea batatas] 1.0 0.764 0.879 8e-95
559005250 ascorbate peroxidase [Nicotiana tabacum] 1.0 0.764 0.863 2e-93
62910196250 cytosolic ascorbate peroxidase [Capsicum 1.0 0.764 0.858 1e-92
1389654250 cytosolic ascorbate peroxidase [Nicotian 1.0 0.764 0.853 2e-92
339777221240 ascorbate peroxidase [Dimocarpus longan] 1.0 0.795 0.858 4e-92
341865450192 ascorbate peroxidase [Nicotiana benthami 1.0 0.994 0.853 6e-92
90658814250 ascorbate peroxidase [Camellia sinensis] 1.0 0.764 0.853 2e-91
289467897250 L-ascorbate peroxidase [Bruguiera gymnor 1.0 0.764 0.853 2e-91
>gi|221327589|gb|ACM17464.1| ascorbate peroxidase 2 [Citrus maxima] Back     alignment and taxonomy information
 Score =  392 bits (1006), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 191/191 (100%), Positives = 191/191 (100%)

Query: 1   MRLAAEQAHSANNGLDIAVRLLEPFKEQFPTISYADLYQLAGVVGVEVTGGPDIPFHPGR 60
           MRLAAEQAHSANNGLDIAVRLLEPFKEQFPTISYADLYQLAGVVGVEVTGGPDIPFHPGR
Sbjct: 60  MRLAAEQAHSANNGLDIAVRLLEPFKEQFPTISYADLYQLAGVVGVEVTGGPDIPFHPGR 119

Query: 61  DDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSGFEGPW 120
           DDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSGFEGPW
Sbjct: 120 DDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSGFEGPW 179

Query: 121 TRNPLIFDNSYFTELLTGEKDGLLQLPSDKALLDDPVFRPLVEKYAADEDAFFADYAEAH 180
           TRNPLIFDNSYFTELLTGEKDGLLQLPSDKALLDDPVFRPLVEKYAADEDAFFADYAEAH
Sbjct: 180 TRNPLIFDNSYFTELLTGEKDGLLQLPSDKALLDDPVFRPLVEKYAADEDAFFADYAEAH 239

Query: 181 LKLSELGFAEA 191
           LKLSELGFAEA
Sbjct: 240 LKLSELGFAEA 250

Source: Citrus maxima

Species: Citrus maxima

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|300837175|gb|ADK38619.1| ascorbate peroxidase [Citrus limon] Back     alignment and taxonomy information
>gi|37783265|gb|AAP42501.1| ascorbate peroxidase [Ipomoea batatas] Back     alignment and taxonomy information
>gi|559005|gb|AAA86689.1| ascorbate peroxidase [Nicotiana tabacum] Back     alignment and taxonomy information
>gi|62910196|gb|AAY21068.1| cytosolic ascorbate peroxidase [Capsicum annuum] Back     alignment and taxonomy information
>gi|1389654|dbj|BAA12918.1| cytosolic ascorbate peroxidase [Nicotiana tabacum] Back     alignment and taxonomy information
>gi|339777221|gb|AEK05507.1| ascorbate peroxidase [Dimocarpus longan] Back     alignment and taxonomy information
>gi|341865450|dbj|BAK53858.1| ascorbate peroxidase [Nicotiana benthamiana] Back     alignment and taxonomy information
>gi|90658814|gb|ABD97259.1| ascorbate peroxidase [Camellia sinensis] Back     alignment and taxonomy information
>gi|289467897|gb|ADC95633.1| L-ascorbate peroxidase [Bruguiera gymnorhiza] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query191
TAIR|locus:2026616250 APX1 "ascorbate peroxidase 1" 1.0 0.764 0.743 1.5e-74
TAIR|locus:2074914251 APX2 "ascorbate peroxidase 2" 0.989 0.752 0.726 2.9e-71
TAIR|locus:2131586287 APX3 "ascorbate peroxidase 3" 0.979 0.651 0.643 1.4e-57
TAIR|locus:2125409279 APX5 "ascorbate peroxidase 5" 0.973 0.666 0.585 1.9e-51
ASPGD|ASPL0000029968312 AN5440 [Emericella nidulans (t 0.717 0.439 0.545 4.6e-42
UNIPROTKB|A4R606300 MGG_10368 "Putative heme-bindi 0.712 0.453 0.535 4e-37
UNIPROTKB|A4QVH4362 CCP1 "Cytochrome c peroxidase, 0.968 0.511 0.427 7.2e-36
ASPGD|ASPL0000044163361 ccp1 [Emericella nidulans (tax 0.722 0.382 0.507 3.6e-34
TAIR|locus:2204735426 TAPX "thylakoidal ascorbate pe 0.633 0.284 0.535 9.1e-29
CGD|CAL0000335291 orf19.584 [Candida albicans (t 0.706 0.463 0.460 2.2e-27
TAIR|locus:2026616 APX1 "ascorbate peroxidase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 752 (269.8 bits), Expect = 1.5e-74, P = 1.5e-74
 Identities = 142/191 (74%), Positives = 157/191 (82%)

Query:     1 MRLAAEQAHSANNGLDIAVRLLEPFKEQFPTISYADLYQLAGVVGVEVTGGPDIPFHPGR 60
             MR  AEQAH AN+G+ IA+RLL+P +EQFPTIS+AD +QLAGVV VEVTGGPDIPFHPGR
Sbjct:    60 MRFDAEQAHGANSGIHIALRLLDPIREQFPTISFADFHQLAGVVAVEVTGGPDIPFHPGR 119

Query:    61 DDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSGFEGPW 120
             +DK +PP EGRLPDA +G DHLR VF  QMGLSDKDIVALSG HTLGRCHK+RSGFEG W
Sbjct:   120 EDKPQPPPEGRLPDATKGCDHLRDVFAKQMGLSDKDIVALSGAHTLGRCHKDRSGFEGAW 179

Query:   121 TRNPLIFDNSYFTELLTGEKDGLLQLPSDKALLDDPVFRPLVEKXXXXXXXXXXXXXXXH 180
             T NPLIFDNSYF ELL+GEK+GLLQL SDKALLDDPVFRPLVEK               H
Sbjct:   180 TSNPLIFDNSYFKELLSGEKEGLLQLVSDKALLDDPVFRPLVEKYAADEDAFFADYAEAH 239

Query:   181 LKLSELGFAEA 191
             +KLSELGFA+A
Sbjct:   240 MKLSELGFADA 250
GO:0004601 "peroxidase activity" evidence=IEA
GO:0005737 "cytoplasm" evidence=ISM
GO:0006979 "response to oxidative stress" evidence=IEA
GO:0016688 "L-ascorbate peroxidase activity" evidence=ISS;IMP;TAS
GO:0020037 "heme binding" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0000302 "response to reactive oxygen species" evidence=IMP
GO:0042744 "hydrogen peroxide catabolic process" evidence=IMP
GO:0009793 "embryo development ending in seed dormancy" evidence=IMP
GO:0009570 "chloroplast stroma" evidence=IDA
GO:0005618 "cell wall" evidence=IDA
GO:0046686 "response to cadmium ion" evidence=IEP;RCA
GO:0005886 "plasma membrane" evidence=IDA
GO:0009651 "response to salt stress" evidence=IEP;RCA
GO:0009507 "chloroplast" evidence=IDA
GO:0005829 "cytosol" evidence=IDA;TAS
GO:0009506 "plasmodesma" evidence=IDA
GO:0005794 "Golgi apparatus" evidence=IDA
GO:0006094 "gluconeogenesis" evidence=RCA
GO:0006096 "glycolysis" evidence=RCA
GO:0006457 "protein folding" evidence=RCA
GO:0006499 "N-terminal protein myristoylation" evidence=RCA
GO:0006511 "ubiquitin-dependent protein catabolic process" evidence=RCA
GO:0006598 "polyamine catabolic process" evidence=RCA
GO:0006833 "water transport" evidence=RCA
GO:0006972 "hyperosmotic response" evidence=RCA
GO:0007030 "Golgi organization" evidence=RCA
GO:0009266 "response to temperature stimulus" evidence=RCA
GO:0009408 "response to heat" evidence=IEP;RCA
GO:0009644 "response to high light intensity" evidence=RCA
GO:0009698 "phenylpropanoid metabolic process" evidence=RCA
GO:0009853 "photorespiration" evidence=RCA
GO:0034976 "response to endoplasmic reticulum stress" evidence=RCA
GO:0042398 "cellular modified amino acid biosynthetic process" evidence=RCA
GO:0042542 "response to hydrogen peroxide" evidence=RCA
GO:0051788 "response to misfolded protein" evidence=RCA
GO:0080129 "proteasome core complex assembly" evidence=RCA
TAIR|locus:2074914 APX2 "ascorbate peroxidase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2131586 APX3 "ascorbate peroxidase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2125409 APX5 "ascorbate peroxidase 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
ASPGD|ASPL0000029968 AN5440 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
UNIPROTKB|A4R606 MGG_10368 "Putative heme-binding peroxidase" [Magnaporthe oryzae 70-15 (taxid:242507)] Back     alignment and assigned GO terms
UNIPROTKB|A4QVH4 CCP1 "Cytochrome c peroxidase, mitochondrial" [Magnaporthe oryzae 70-15 (taxid:242507)] Back     alignment and assigned GO terms
ASPGD|ASPL0000044163 ccp1 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
TAIR|locus:2204735 TAPX "thylakoidal ascorbate peroxidase" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
CGD|CAL0000335 orf19.584 [Candida albicans (taxid:5476)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q05431APX1_ARATH1, ., 1, 1, ., 1, ., 1, 10.82191.00.764yesno
Q9FE01APX2_ORYSJ1, ., 1, 1, ., 1, ., 1, 10.83680.99470.7569yesno
A2XFC7APX1_ORYSI1, ., 1, 1, ., 1, ., 1, 10.81671.00.764N/Ano
P48534APX1_PEA1, ., 1, 1, ., 1, ., 1, 10.83761.00.764N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.11.10.976
4th Layer1.11.1.110.991

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query191
cd00691253 cd00691, ascorbate_peroxidase, Ascorbate peroxidas 1e-121
PLN02364250 PLN02364, PLN02364, L-ascorbate peroxidase 1 1e-112
PLN02608289 PLN02608, PLN02608, L-ascorbate peroxidase 1e-109
PLN02879251 PLN02879, PLN02879, L-ascorbate peroxidase 1e-107
cd00314255 cd00314, plant_peroxidase_like, Heme-dependent per 1e-45
pfam00141180 pfam00141, peroxidase, Peroxidase 3e-41
COG0376 730 COG0376, KatG, Catalase (peroxidase I) [Inorganic 8e-28
cd00693298 cd00693, secretory_peroxidase, Horseradish peroxid 5e-27
cd00692328 cd00692, ligninase, Ligninase and other manganese- 4e-17
cd00649409 cd00649, catalase_peroxidase_1, N-terminal catalyt 3e-15
TIGR00198 716 TIGR00198, cat_per_HPI, catalase/peroxidase HPI 1e-13
PRK15061 726 PRK15061, PRK15061, catalase/hydroperoxidase HPI(I 6e-12
cd08201264 cd08201, plant_peroxidase_like_1, Uncharacterized 1e-09
PLN03030324 PLN03030, PLN03030, cationic peroxidase; Provision 3e-06
>gnl|CDD|173825 cd00691, ascorbate_peroxidase, Ascorbate peroxidases and cytochrome C peroxidases Back     alignment and domain information 
 Score =  341 bits (877), Expect = e-121
 Identities = 128/198 (64%), Positives = 149/198 (75%), Gaps = 8/198 (4%)

Query: 1   MRLAAEQAHSANNGLDIAVRLLEPFKEQFPTISYADLYQLAGVVGVEVTGGPDIPFHPGR 60
           +R   E  H AN GLDIA +LLEP K+++P ISYADL+QLAGVV +E  GGP IPF PGR
Sbjct: 57  IRFDPELNHGANAGLDIARKLLEPIKKKYPDISYADLWQLAGVVAIEEMGGPKIPFRPGR 116

Query: 61  DDKAEP---PQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSGFE 117
            D ++P   P EGRLPDA +G DHLR VF  +MG +D++IVALSG HTLGRCHKERSG++
Sbjct: 117 VDASDPEECPPEGRLPDASKGADHLRDVFY-RMGFNDQEIVALSGAHTLGRCHKERSGYD 175

Query: 118 GPWTRNPLIFDNSYFTELLTGEKD----GLLQLPSDKALLDDPVFRPLVEKYAADEDAFF 173
           GPWT+NPL FDNSYF ELL  +      GLL LP+DKALL+DP FRP VE YA D+DAFF
Sbjct: 176 GPWTKNPLKFDNSYFKELLEEDWKLPTPGLLMLPTDKALLEDPKFRPYVELYAKDQDAFF 235

Query: 174 ADYAEAHLKLSELGFAEA 191
            DYAEAH KLSELG    
Sbjct: 236 KDYAEAHKKLSELGVPFP 253

Ascorbate peroxidases are a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Along with related catalase-peroxidases, ascorbate peroxidases belong to class I of the plant superfamily. Ascorbate peroxidases are found in the chloroplasts and/or cytosol of algae and plants, where they have been shown to control the concentration of lethal hydrogen peroxide molecules. The yeast cytochrome c peroxidase is a divergent member of the family; it forms a complex with cytochrome c to catalyze the reduction of hydrogen peroxide to water. Length = 253
>gnl|CDD|166005 PLN02364, PLN02364, L-ascorbate peroxidase 1 Back     alignment and domain information
>gnl|CDD|178218 PLN02608, PLN02608, L-ascorbate peroxidase Back     alignment and domain information
>gnl|CDD|178467 PLN02879, PLN02879, L-ascorbate peroxidase Back     alignment and domain information
>gnl|CDD|173823 cd00314, plant_peroxidase_like, Heme-dependent peroxidases similar to plant peroxidases Back     alignment and domain information
>gnl|CDD|215745 pfam00141, peroxidase, Peroxidase Back     alignment and domain information
>gnl|CDD|223453 COG0376, KatG, Catalase (peroxidase I) [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|173827 cd00693, secretory_peroxidase, Horseradish peroxidase and related secretory plant peroxidases Back     alignment and domain information
>gnl|CDD|173826 cd00692, ligninase, Ligninase and other manganese-dependent fungal peroxidases Back     alignment and domain information
>gnl|CDD|173824 cd00649, catalase_peroxidase_1, N-terminal catalytic domain of catalase-peroxidases Back     alignment and domain information
>gnl|CDD|232870 TIGR00198, cat_per_HPI, catalase/peroxidase HPI Back     alignment and domain information
>gnl|CDD|237891 PRK15061, PRK15061, catalase/hydroperoxidase HPI(I); Provisional Back     alignment and domain information
>gnl|CDD|173829 cd08201, plant_peroxidase_like_1, Uncharacterized family of plant peroxidase-like proteins Back     alignment and domain information
>gnl|CDD|215545 PLN03030, PLN03030, cationic peroxidase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 191
PLN02879251 L-ascorbate peroxidase 100.0
PLN02364250 L-ascorbate peroxidase 1 100.0
PLN02608289 L-ascorbate peroxidase 100.0
cd00691253 ascorbate_peroxidase Ascorbate peroxidases and cyt 100.0
PLN03030324 cationic peroxidase; Provisional 100.0
cd00692328 ligninase Ligninase and other manganese-dependent 100.0
cd00693298 secretory_peroxidase Horseradish peroxidase and re 100.0
cd00649409 catalase_peroxidase_1 N-terminal catalytic domain 100.0
cd00314255 plant_peroxidase_like Heme-dependent peroxidases s 100.0
TIGR00198 716 cat_per_HPI catalase/peroxidase HPI. Note that the 100.0
PRK15061 726 catalase/hydroperoxidase HPI(I); Provisional 100.0
PF00141230 peroxidase: Peroxidase; InterPro: IPR002016 Peroxi 100.0
cd08200297 catalase_peroxidase_2 C-terminal non-catalytic dom 100.0
cd08201264 plant_peroxidase_like_1 Uncharacterized family of 100.0
TIGR00198716 cat_per_HPI catalase/peroxidase HPI. Note that the 100.0
PRK15061726 catalase/hydroperoxidase HPI(I); Provisional 100.0
COG0376 730 KatG Catalase (peroxidase I) [Inorganic ion transp 100.0
COG0376730 KatG Catalase (peroxidase I) [Inorganic ion transp 99.73
>PLN02879 L-ascorbate peroxidase Back     alignment and domain information 
Probab=100.00  E-value=1.7e-64  Score=423.33  Aligned_cols=189  Identities=79%  Similarity=1.320  Sum_probs=184.4

Q ss_pred             CCChhhhcCcCcCChHHHHHHHHHHHHhCCCCChHHHHHHhHHHHHHhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCChH
Q 029599            1 MRLAAEQAHSANNGLDIAVRLLEPFKEQFPTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGND   80 (191)
Q Consensus         1 ir~~~E~~~~~N~gl~~~~~~i~~ik~~~~~VS~ADiialAa~~Av~~~ggP~~~v~~GR~D~~~~~~~~~lP~p~~~~~   80 (191)
                      |||++|+++++|.||+.++++|++||+++++|||||||+|||++||+++|||.|+|++||+|+.+++++++||.|+.+++
T Consensus        61 irf~~E~~~~~N~gL~~~~~~i~~iK~~~~~VScADilalAa~~AV~~~GGP~~~~~~GR~D~~~~~~~~~lP~p~~~~~  140 (251)
T PLN02879         61 IRHPQELAHDANNGLDIAVRLLDPIKELFPILSYADFYQLAGVVAVEITGGPEIPFHPGRLDKVEPPPEGRLPQATKGVD  140 (251)
T ss_pred             ecChhhccCCCcCChHHHHHHHHHHHHHcCCcCHHHHHHHHHHHHHHhcCCCccCCCCCCCCCCCCCcccCCCCCCCCHH
Confidence            79999999999999988999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcCCCccchhhccCCccccccccCCCCCCCCCCCCCCccChHHHHHHhhccCCCcccccccccccCCCChHH
Q 029599           81 HLRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSGFEGPWTRNPLIFDNSYFTELLTGEKDGLLQLPSDKALLDDPVFRP  160 (191)
Q Consensus        81 ~~~~~F~~~~Gl~~~e~VaL~GaHtiG~~~~~~~~~~~~~~~tp~~fDn~Yy~~l~~~~~~gl~~l~sD~~L~~d~~t~~  160 (191)
                      ++++.| +++||+++|||||+||||||++||.++++.|+|+.||.+|||+||++|+.++.+|+++|+||++|+.|++|++
T Consensus       141 ~l~~~F-~~~Gl~~~dlVALsGaHTiG~ah~~r~g~~g~~d~tp~~FDN~Yy~~ll~~~~~gll~L~SD~aL~~D~~t~~  219 (251)
T PLN02879        141 HLRDVF-GRMGLNDKDIVALSGGHTLGRCHKERSGFEGAWTPNPLIFDNSYFKEILSGEKEGLLQLPTDKALLDDPLFLP  219 (251)
T ss_pred             HHHHHH-HHcCCCHHHHeeeeccccccccccccccCCCCCCCCccceeHHHHHHHHcCCcCCCccchhhHHHhcCCcHHH
Confidence            999999 9999999999999999999999999999999999999999999999999986689999999999999999999


Q ss_pred             HHHHhhhCHHHHHHHHHHHHHHHHhCCCCC
Q 029599          161 LVEKYAADEDAFFADYAEAHLKLSELGFAE  190 (191)
Q Consensus       161 ~v~~~A~d~~~f~~~F~~am~Km~~~gv~~  190 (191)
                      +|++||.|+++|+++|+.||+||+++|+.+
T Consensus       220 ~V~~~A~d~~~F~~~Fa~Am~KL~~lg~~~  249 (251)
T PLN02879        220 FVEKYAADEDAFFEDYTEAHLKLSELGFAD  249 (251)
T ss_pred             HHHHHhhCHHHHHHHHHHHHHHHHccCCCC
Confidence            999999999999999999999999999976

>PLN02364 L-ascorbate peroxidase 1 Back     alignment and domain information
>PLN02608 L-ascorbate peroxidase Back     alignment and domain information
>cd00691 ascorbate_peroxidase Ascorbate peroxidases and cytochrome C peroxidases Back     alignment and domain information
>PLN03030 cationic peroxidase; Provisional Back     alignment and domain information
>cd00692 ligninase Ligninase and other manganese-dependent fungal peroxidases Back     alignment and domain information
>cd00693 secretory_peroxidase Horseradish peroxidase and related secretory plant peroxidases Back     alignment and domain information
>cd00649 catalase_peroxidase_1 N-terminal catalytic domain of catalase-peroxidases Back     alignment and domain information
>cd00314 plant_peroxidase_like Heme-dependent peroxidases similar to plant peroxidases Back     alignment and domain information
>TIGR00198 cat_per_HPI catalase/peroxidase HPI Back     alignment and domain information
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional Back     alignment and domain information
>PF00141 peroxidase: Peroxidase; InterPro: IPR002016 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions Back     alignment and domain information
>cd08200 catalase_peroxidase_2 C-terminal non-catalytic domain of catalase-peroxidases Back     alignment and domain information
>cd08201 plant_peroxidase_like_1 Uncharacterized family of plant peroxidase-like proteins Back     alignment and domain information
>TIGR00198 cat_per_HPI catalase/peroxidase HPI Back     alignment and domain information
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional Back     alignment and domain information
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query191
1apx_A249 Crystal Structure Of Recombinant Ascorbate Peroxida 1e-81
3zch_A261 Ascorbate Peroxidase W41a-h42m Mutant Length = 261 1e-79
2ggn_X261 Conformational Mobility In The Active Site Of A Hem 2e-79
2vcs_A261 Structure Of Isoniazid (Inh) Bound To Cytosolic Soy 2e-79
3zcg_A261 Ascorbate Peroxidase W41a-h42c Mutant Length = 261 2e-79
1oaf_A261 Ascobate Peroxidase From Soybean Cytosol In Complex 2e-79
3zcy_A249 Ascorbate Peroxidase W41a-h42y Mutant Length = 249 2e-79
2vcf_X264 Structure Of Isoniazid (Inh) Bound To Cytosolic Soy 3e-79
2y6b_A249 Ascorbate Peroxidase R38k Mutant Length = 249 3e-79
2xif_A249 The Structure Of Ascorbate Peroxidase Compound Ii L 3e-79
2y6a_A249 Ascorbate Peroxidase R38a Mutant Length = 249 3e-79
2cl4_X261 Ascorbate Peroxidase R172a Mutant Length = 261 1e-78
1iyn_A295 Crystal Structure Of Chloroplastic Ascorbate Peroxi 1e-36
3riv_A271 The Crystal Structure Of Leishmania Major Peroxidas 4e-35
4ged_A268 Crystal Structure Of The Leishmania Major Peroxidas 4e-35
3riw_A271 The Crystal Structure Of Leishmania Major Peroxidas 7e-34
1stq_A294 Cyrstal Structure Of Cytochrome C Peroxidase Mutant 8e-33
1jci_A294 Stabilization Of The Engineered Cation-Binding Loop 3e-32
1sog_A294 Cyrstal Structure Of Cytochrome C Peroxidase Mutant 4e-32
1jdr_A294 Crystal Structure Of A Proximal Domain Potassium Bi 3e-31
1krj_A294 Engineering Calcium-Binding Site Into Cytochrome C 8e-30
3m23_A291 Crystallographic And Single Crystal Spectral Analys 3e-28
4a71_A296 Cytochrome C Peroxidase In Complex With Phenol Leng 3e-28
2v2e_A294 Structure Of Isoniazid (Inh) Bound To Cytochrome C 3e-28
2v23_A296 Structure Of Cytochrome C Peroxidase Mutant N184r Y 3e-28
2xj5_A294 The Structure Of Cytochrome C Peroxidase Compound I 1e-27
3r98_A293 Joint Neutron And X-Ray Structure Of Cytochrome C P 1e-27
1mk8_A294 Crystal Structure Of A Mutant Cytochrome C Peroxida 1e-27
1kok_A294 Crystal Structure Of Mesopone Cytochrome C Peroxida 1e-27
2xil_A294 The Structure Of Cytochrome C Peroxidase Compound I 1e-27
1ebe_A294 Laue Diffraction Study On The Structure Of Cytochro 1e-27
4a78_A296 Cytochrome C Peroxidase M119w In Complex With Guiac 1e-27
3e2o_A294 Crystal Structure Of Cytochrome C Peroxidase, N184r 2e-27
1s6v_A294 Structure Of A Cytochrome C Peroxidase-Cytochrome C 2e-27
4a7m_A296 Cytochrome C Peroxidase S81w Mutant Length = 296 2e-27
1cck_A291 Altering Substrate Specificity Of Cytochrome C Pero 3e-27
3e2n_A287 Engineering Ascorbate Peroxidase Activity Into Cyto 5e-27
2x07_A293 Cytochrome C Peroxidase: Engineered Ascorbate Bindi 5e-27
1a2f_A291 Probing The Strength And Character Of An Asp-His-X 7e-27
1dj1_A291 Crystal Structure Of R48a Mutant Of Cytochrome C Pe 8e-27
1cyf_A296 Identifying The Physiological Electron Transfer Sit 8e-27
2pcb_A296 Crystal Structure Of A Complex Between Electron Tra 8e-27
1cca_A297 The Asp-His-Fe Triad Of Cytochrome C Peroxidase Con 8e-27
1a2g_A291 Probing The Strength And Character Of An Asp-His-X 8e-27
7ccp_A296 Effect Of Arginine-48 Replacement On The Reaction B 9e-27
6ccp_A296 Effect Of Arginine-48 Replacement On The Reaction B 9e-27
1bva_A294 Manganese Binding Mutant In Cytochrome C Peroxidase 9e-27
4ccp_A296 X-Ray Structures Of Recombinant Yeast Cytochrome C 9e-27
5ccp_A296 Histidine 52 Is A Critical Residue For Rapid Format 9e-27
1bep_A291 Effect Of Unnatural Heme Substitution On Kinetics O 9e-27
2gb8_A294 Solution Structure Of The Complex Between Yeast Iso 9e-27
2cep_A296 Role Of Met-230 In Intramolecular Electron Transfer 9e-27
1bek_A291 Effect Of Unnatural Heme Substitution On Kinetics O 1e-26
2ccp_A296 X-Ray Structures Of Recombinant Yeast Cytochrome C 2e-26
1ccb_A297 The Asp-His-Fe Triad Of Cytochrome C Peroxidase Con 3e-26
4ccx_A294 Altering Substrate Specificity At The Heme Edge Of 3e-26
3ccx_A294 Altering Substrate Specificity At The Heme Edge Of 3e-26
1ccl_A291 Probing The Strength And Character Of An Asp-His-X 4e-26
1cci_A294 How Flexible Are Proteins? Trapping Of A Flexible L 5e-26
1ccc_A297 The Asp-His-Fe Triad Of Cytochrome C Peroxidase Con 7e-26
2ia8_A291 Kinetic And Crystallographic Studies Of A Redesigne 7e-26
1beq_A291 Interaction Between Proximal And Distals Regions Of 1e-25
1ds4_A292 Cytochrome C Peroxidase H175g Mutant, Imidazole Com 1e-25
1cce_A291 Construction Of A Bis-Aquo Heme Enzyme And Replacem 1e-25
1dcc_A296 2.2 Angstrom Structure Of Oxyperoxidase: A Model Fo 2e-25
1dse_A292 Cytochrome C Peroxidase H175g Mutant, Imidazole Com 3e-25
1cpg_A296 A Cation Binding Motif Stabilizes The Compound I Ra 4e-25
1bem_A291 Interaction Between Proximal And Distals Regions Of 5e-25
1cpd_A296 A Cation Binding Motif Stabilizes The Compound I Ra 5e-25
2aqd_A294 Cytochrome C Peroxidase (Ccp) In Complex With 2,5- 5e-25
2anz_A294 Cytochrome C Peroxidase In Complex With 2,6-Diamino 5e-25
2rbu_X292 Cytochrome C Peroxidase In Complex With Cyclopentan 6e-25
1bej_A291 Interaction Between Proximal And Distals Regions Of 6e-25
1cmu_A294 The Role Of Aspartate-235 In The Binding Of Cations 1e-24
1kxm_A290 Crystal Structure Of Cytochrome C Peroxidase With A 3e-24
3exb_A295 Crystal Structure Of Cytochrome C Peroxidase With A 3e-24
1kxn_A289 Crystal Structure Of Cytochrome C Peroxidase With A 3e-24
1mn1_A357 Manganese Peroxidase Substrate Binding Site Mutant 2e-13
1mn2_A357 Manganese Peroxidase Substrate Binding Site Mutant 2e-13
1yyd_A357 High Resolution Crystal Structure Of Manganese Pero 4e-13
3q3u_A338 Trametes Cervina Lignin Peroxidase Length = 338 2e-09
3fm6_A331 Crystal Structure Analysis Of Fungal Versatile Pero 2e-08
3vlh_A 737 Crystal Structure Analysis Of The Arg409leu Variant 3e-08
1ub2_A 720 Crystal Structure Of Catalase-Peroxidase From Synec 3e-08
1itk_A 731 Crystal Structure Of Catalase-peroxidase From Haloa 3e-08
4fef_A315 The Crystal Structures Of Several Mutants Of Pleuro 5e-08
3uw8_A 737 Crystal Structure Analysis Of The Ser305thr Variant 6e-08
3vlk_A 737 Crystal Structure Analysis Of The Ser305ala Variant 7e-08
4a5g_A308 Raphanus Sativus Anionic Peroxidase. Length = 308 2e-07
3vlm_A 737 Crystal Structure Analysis Of The Met244ala Variant 2e-07
1b80_A351 Rec. Lignin Peroxidase H8 Oxidatively Processed Len 1e-05
1mwv_A 714 Crystal Structure Of Catalase-peroxidase Katg Of Bu 2e-05
2dv1_A 748 Crystal Structure Of D141e Mutant Of Bpkatg Length 2e-05
2dv2_A 748 Crystal Structure Of D141e Mutant Of Bpkatg At Ph 8 2e-05
1b82_A351 Pristine Recomb. Lignin Peroxidase H8 Length = 351 2e-05
1b85_A351 Lignin Peroxidase Length = 351 2e-05
3n3s_A 748 Crystal Structure Of The E198a Variant Of Burkholde 2e-05
3n3r_A 748 Crystal Structure Of The E198a Variant Of Catalase- 2e-05
1x7u_A 748 Crystal Structure Of The S324t Of Catalase-Peroxida 2e-05
1fhf_A304 The Structure Of Soybean Peroxidase Length = 304 2e-05
2fxg_A 748 Crystal Structure Of Katg At Ph 4.5 Length = 748 2e-05
3n3q_A 748 Crystal Structure Of The S324t Variant Of Burkholde 2e-05
2fxj_A 748 Crystal Structure Of Katg At Ph 8.5 Length = 748 2e-05
3ut2_A 764 Crystal Structure Of Fungal Magkatg2 Length = 764 5e-05
1bgp_A309 Crystal Structure Of Barley Grain Peroxidase 1 Leng 6e-05
1pa2_A306 Arabidopsis Thaliana Peroxidase A2 Length = 306 8e-05
1gx2_A309 Recombinant Horseradish Peroxidase Phe209ser Comple 1e-04
4atj_A309 Distal Heme Pocket Mutant (H42e) Of Recombinant Hor 1e-04
3atj_A309 Heme Ligand Mutant Of Recombinant Horseradish Perox 1e-04
1kzm_A308 Distal Heme Pocket Mutant (r38s/h42e) Of Recombinan 1e-04
6atj_A308 Recombinant Horseradish Peroxidase C Complex With F 2e-04
1w4w_A323 Ferric Horseradish Peroxidase C1a In Complex With F 2e-04
1atj_A306 Recombinant Horseradish Peroxidase C1a Length = 306 2e-04
2atj_A308 Recombinant Horseradish Peroxidase Complex With Ben 2e-04
1gwo_A309 Recombinant Horseradish Peroxidase C1a Ala170gln Le 2e-04
1gwu_A309 Recombinant Horseradish Peroxidase C1a Ala140gly Le 2e-04
1gw2_A308 Recombinant Horseradish Peroxidase C1a Thr171ser In 4e-04
2ylj_A306 Horse Radish Peroxidase, Mutant S167y Length = 306 8e-04
>pdb|1APX|A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase Length = 249 Back     alignment and structure 
Iteration: 1

 Score =  298 bits (763), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 146/191 (76%), Positives = 157/191 (82%)
Query: 1   MRLAAEQAHSANNGLDIAVRLLEPFKEQFPTISYADLYQLAGVVGVEVTGGPDIPFHPGR 60
           ++  AE AH ANNGLDIAVRLLEP KEQFP +SYAD YQLAGVV VE+TGGP++PFHPGR
Sbjct: 59  IKHQAELAHGANNGLDIAVRLLEPIKEQFPIVSYADFYQLAGVVAVEITGGPEVPFHPGR 118
Query: 61  DDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSGFEGPW 120
           +DK EPP EGRLPDA +G+DHLR VFG  MGLSD+DIVALSGGHT+G  HKERSGFEGPW
Sbjct: 119 EDKPEPPPEGRLPDATKGSDHLRDVFGKAMGLSDQDIVALSGGHTIGAAHKERSGFEGPW 178
Query: 121 TRNPLIFDNSYFTELLTGEKDGLLQLPSDKALLDDPVFRPLVEKXXXXXXXXXXXXXXXH 180
           T NPLIFDNSYFTELLTGEKDGLLQLPSDKALL D VFRPLVEK               H
Sbjct: 179 TSNPLIFDNSYFTELLTGEKDGLLQLPSDKALLTDSVFRPLVEKYAADEDVFFADYAEAH 238
Query: 181 LKLSELGFAEA 191
           LKLSELGFAEA
Sbjct: 239 LKLSELGFAEA 249
>pdb|3ZCH|A Chain A, Ascorbate Peroxidase W41a-h42m Mutant Length = 261 Back     alignment and structure
>pdb|2GGN|X Chain X, Conformational Mobility In The Active Site Of A Heme Peroxidase Length = 261 Back     alignment and structure
>pdb|2VCS|A Chain A, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean Ascorbate Peroxidase Mutant H42a Length = 261 Back     alignment and structure
>pdb|3ZCG|A Chain A, Ascorbate Peroxidase W41a-h42c Mutant Length = 261 Back     alignment and structure
>pdb|1OAF|A Chain A, Ascobate Peroxidase From Soybean Cytosol In Complex With Ascorbate Length = 261 Back     alignment and structure
>pdb|3ZCY|A Chain A, Ascorbate Peroxidase W41a-h42y Mutant Length = 249 Back     alignment and structure
>pdb|2VCF|X Chain X, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean Ascorbate Peroxidase Length = 264 Back     alignment and structure
>pdb|2Y6B|A Chain A, Ascorbate Peroxidase R38k Mutant Length = 249 Back     alignment and structure
>pdb|2XIF|A Chain A, The Structure Of Ascorbate Peroxidase Compound Ii Length = 249 Back     alignment and structure
>pdb|2Y6A|A Chain A, Ascorbate Peroxidase R38a Mutant Length = 249 Back     alignment and structure
>pdb|2CL4|X Chain X, Ascorbate Peroxidase R172a Mutant Length = 261 Back     alignment and structure
>pdb|1IYN|A Chain A, Crystal Structure Of Chloroplastic Ascorbate Peroxidase From Tobacco Plants And Structural Insights For Its Instability Length = 295 Back     alignment and structure
>pdb|3RIV|A Chain A, The Crystal Structure Of Leishmania Major Peroxidase Length = 271 Back     alignment and structure
>pdb|4GED|A Chain A, Crystal Structure Of The Leishmania Major Peroxidase-Cytochrome C Complex Length = 268 Back     alignment and structure
>pdb|3RIW|A Chain A, The Crystal Structure Of Leishmania Major Peroxidase Mutant C197t Length = 271 Back     alignment and structure
>pdb|1STQ|A Chain A, Cyrstal Structure Of Cytochrome C Peroxidase Mutant: Ccpk2m3 Length = 294 Back     alignment and structure
>pdb|1JCI|A Chain A, Stabilization Of The Engineered Cation-Binding Loop In Cytochrome C Peroxidase (Ccp) Length = 294 Back     alignment and structure
>pdb|1SOG|A Chain A, Cyrstal Structure Of Cytochrome C Peroxidase Mutant: Ccpk2m2 Length = 294 Back     alignment and structure
>pdb|1JDR|A Chain A, Crystal Structure Of A Proximal Domain Potassium Binding Variant Of Cytochrome C Peroxidase Length = 294 Back     alignment and structure
>pdb|1KRJ|A Chain A, Engineering Calcium-Binding Site Into Cytochrome C Peroxidase (Ccp) Length = 294 Back     alignment and structure
>pdb|3M23|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of The Peroxidase Ferryl Intermediate Length = 291 Back     alignment and structure
>pdb|4A71|A Chain A, Cytochrome C Peroxidase In Complex With Phenol Length = 296 Back     alignment and structure
>pdb|2V2E|A Chain A, Structure Of Isoniazid (Inh) Bound To Cytochrome C Peroxidase Mutant N184r Y36a Length = 294 Back     alignment and structure
>pdb|2V23|A Chain A, Structure Of Cytochrome C Peroxidase Mutant N184r Y36a Length = 296 Back     alignment and structure
>pdb|2XJ5|A Chain A, The Structure Of Cytochrome C Peroxidase Compound Ii Length = 294 Back     alignment and structure
>pdb|3R98|A Chain A, Joint Neutron And X-Ray Structure Of Cytochrome C Peroxidase Length = 293 Back     alignment and structure
>pdb|1MK8|A Chain A, Crystal Structure Of A Mutant Cytochrome C Peroxidase Showing A Novel Trp-Tyr Covalent Cross-Link Length = 294 Back     alignment and structure
>pdb|1KOK|A Chain A, Crystal Structure Of Mesopone Cytochrome C Peroxidase (Mpccp) Length = 294 Back     alignment and structure
>pdb|2XIL|A Chain A, The Structure Of Cytochrome C Peroxidase Compound I Length = 294 Back     alignment and structure
>pdb|1EBE|A Chain A, Laue Diffraction Study On The Structure Of Cytochrome C Peroxidase Compound I Length = 294 Back     alignment and structure
>pdb|4A78|A Chain A, Cytochrome C Peroxidase M119w In Complex With Guiacol Length = 296 Back     alignment and structure
>pdb|3E2O|A Chain A, Crystal Structure Of Cytochrome C Peroxidase, N184r Mutant Length = 294 Back     alignment and structure
>pdb|1S6V|A Chain A, Structure Of A Cytochrome C Peroxidase-Cytochrome C Site Specific Cross-Link Length = 294 Back     alignment and structure
>pdb|4A7M|A Chain A, Cytochrome C Peroxidase S81w Mutant Length = 296 Back     alignment and structure
>pdb|1CCK|A Chain A, Altering Substrate Specificity Of Cytochrome C Peroxidase Towards A Small Molecular Substrate Peroxidase By Substituting Tyrosine For Phe 202 Length = 291 Back     alignment and structure
>pdb|3E2N|A Chain A, Engineering Ascorbate Peroxidase Activity Into Cytochrome C Peroxidase Length = 287 Back     alignment and structure
>pdb|2X07|A Chain A, Cytochrome C Peroxidase: Engineered Ascorbate Binding Site Length = 293 Back     alignment and structure
>pdb|1A2F|A Chain A, Probing The Strength And Character Of An Asp-His-X Hydrogen Bond By Introducing Buried Charges Length = 291 Back     alignment and structure
>pdb|1DJ1|A Chain A, Crystal Structure Of R48a Mutant Of Cytochrome C Peroxidase Length = 291 Back     alignment and structure
>pdb|1CYF|A Chain A, Identifying The Physiological Electron Transfer Site Of Cytochrome C Peroxidase By Structure-Based Engineering Length = 296 Back     alignment and structure
>pdb|2PCB|A Chain A, Crystal Structure Of A Complex Between Electron Transfer Partners, Cytochrome C Peroxidase And Cytochrome C Length = 296 Back     alignment and structure
>pdb|1CCA|A Chain A, The Asp-His-Fe Triad Of Cytochrome C Peroxidase Controls The Reduction Potential, Electronic Structure, And Coupling Of The Tryptophan Free-Radical To The Heme Length = 297 Back     alignment and structure
>pdb|1A2G|A Chain A, Probing The Strength And Character Of An Asp-His-X Hydrogen Bond By Introducing Buried Charges Length = 291 Back     alignment and structure
>pdb|7CCP|A Chain A, Effect Of Arginine-48 Replacement On The Reaction Between Cytochrome C Peroxidase And Hydrogen Peroxide Length = 296 Back     alignment and structure
>pdb|6CCP|A Chain A, Effect Of Arginine-48 Replacement On The Reaction Between Cytochrome C Peroxidase And Hydrogen Peroxide Length = 296 Back     alignment and structure
>pdb|1BVA|A Chain A, Manganese Binding Mutant In Cytochrome C Peroxidase Length = 294 Back     alignment and structure
>pdb|4CCP|A Chain A, X-Ray Structures Of Recombinant Yeast Cytochrome C Peroxidase And Three Heme-Cleft Mutants Prepared By Site-Directed Mutagenesis Length = 296 Back     alignment and structure
>pdb|5CCP|A Chain A, Histidine 52 Is A Critical Residue For Rapid Formation Of Cytochrome C Peroxidase Compound I Length = 296 Back     alignment and structure
>pdb|1BEP|A Chain A, Effect Of Unnatural Heme Substitution On Kinetics Of Electron Transfer In Cytochrome C Peroxidase Length = 291 Back     alignment and structure
>pdb|2GB8|A Chain A, Solution Structure Of The Complex Between Yeast Iso-1- Cytochrome C And Yeast Cytochrome C Peroxidase Length = 294 Back     alignment and structure
>pdb|2CEP|A Chain A, Role Of Met-230 In Intramolecular Electron Transfer Between The Oxyferryl Heme And Trp 191 In Cytochrome C Peroxidase Compound Ii Length = 296 Back     alignment and structure
>pdb|1BEK|A Chain A, Effect Of Unnatural Heme Substitution On Kinetics Of Electron Transfer In Cytochrome C Peroxidase Length = 291 Back     alignment and structure
>pdb|2CCP|A Chain A, X-Ray Structures Of Recombinant Yeast Cytochrome C Peroxidase And Three Heme-Cleft Mutants Prepared By Site-Directed Mutagenesis Length = 296 Back     alignment and structure
>pdb|1CCB|A Chain A, The Asp-His-Fe Triad Of Cytochrome C Peroxidase Controls The Reduction Potential, Electronic Structure, And Coupling Of The Tryptophan Free-Radical To The Heme Length = 297 Back     alignment and structure
>pdb|4CCX|A Chain A, Altering Substrate Specificity At The Heme Edge Of Cytochrome C Peroxidase Length = 294 Back     alignment and structure
>pdb|3CCX|A Chain A, Altering Substrate Specificity At The Heme Edge Of Cytochrome C Peroxidase Length = 294 Back     alignment and structure
>pdb|1CCL|A Chain A, Probing The Strength And Character Of An Asp-His-X Hydrogen Bond By Introducing Buried Charges Length = 291 Back     alignment and structure
>pdb|1CCI|A Chain A, How Flexible Are Proteins? Trapping Of A Flexible Loop Length = 294 Back     alignment and structure
>pdb|1CCC|A Chain A, The Asp-His-Fe Triad Of Cytochrome C Peroxidase Controls The Reduction Potential, Electronic Structure, And Coupling Of The Tryptophan Free-Radical To The Heme Length = 297 Back     alignment and structure
>pdb|2IA8|A Chain A, Kinetic And Crystallographic Studies Of A Redesigned Manganese-Binding Site In Cytochrome C Peroxidase Length = 291 Back     alignment and structure
>pdb|1BEQ|A Chain A, Interaction Between Proximal And Distals Regions Of Cytochrome C Peroxidase Length = 291 Back     alignment and structure
>pdb|1DS4|A Chain A, Cytochrome C Peroxidase H175g Mutant, Imidazole Complex, Ph 6, 100k Length = 292 Back     alignment and structure
>pdb|1CCE|A Chain A, Construction Of A Bis-Aquo Heme Enzyme And Replacement With Exogenous Ligand Length = 291 Back     alignment and structure
>pdb|1DCC|A Chain A, 2.2 Angstrom Structure Of Oxyperoxidase: A Model For The Enzyme:peroxide Complex Length = 296 Back     alignment and structure
>pdb|1DSE|A Chain A, Cytochrome C Peroxidase H175g Mutant, Imidazole Complex, With Phosphate Bound, Ph 6, 100k Length = 292 Back     alignment and structure
>pdb|1CPG|A Chain A, A Cation Binding Motif Stabilizes The Compound I Radical Of Cytochrome C Peroxidase Length = 296 Back     alignment and structure
>pdb|1BEM|A Chain A, Interaction Between Proximal And Distals Regions Of Cytochrome C Peroxidase Length = 291 Back     alignment and structure
>pdb|1CPD|A Chain A, A Cation Binding Motif Stabilizes The Compound I Radical Of Cytochrome C Peroxidase Length = 296 Back     alignment and structure
>pdb|2AQD|A Chain A, Cytochrome C Peroxidase (Ccp) In Complex With 2,5- Diaminopyridine Length = 294 Back     alignment and structure
>pdb|2ANZ|A Chain A, Cytochrome C Peroxidase In Complex With 2,6-Diaminopyridine Length = 294 Back     alignment and structure
>pdb|2RBU|X Chain X, Cytochrome C Peroxidase In Complex With Cyclopentane-Carboximidamide Length = 292 Back     alignment and structure
>pdb|1BEJ|A Chain A, Interaction Between Proximal And Distals Regions Of Cytochrome C Peroxidase Length = 291 Back     alignment and structure
>pdb|1CMU|A Chain A, The Role Of Aspartate-235 In The Binding Of Cations To An Artificial Cavity At The Radical Site Of Cytochrome C Peroxidase Length = 294 Back     alignment and structure
>pdb|1KXM|A Chain A, Crystal Structure Of Cytochrome C Peroxidase With A Proposed Electron Transfer Pathway Excised To Form A Ligand Binding Channel Length = 290 Back     alignment and structure
>pdb|3EXB|A Chain A, Crystal Structure Of Cytochrome C Peroxidase With A Proposed Electron Pathway Excised In A Complex With A Peptide Wire Length = 295 Back     alignment and structure
>pdb|1KXN|A Chain A, Crystal Structure Of Cytochrome C Peroxidase With A Proposed Electron Transfer Pathway Excised To Form A Ligand Binding Channel Length = 289 Back     alignment and structure
>pdb|1MN1|A Chain A, Manganese Peroxidase Substrate Binding Site Mutant D179n Length = 357 Back     alignment and structure
>pdb|1MN2|A Chain A, Manganese Peroxidase Substrate Binding Site Mutant E35q, D179n Length = 357 Back     alignment and structure
>pdb|1YYD|A Chain A, High Resolution Crystal Structure Of Manganese Peroxidase Length = 357 Back     alignment and structure
>pdb|3Q3U|A Chain A, Trametes Cervina Lignin Peroxidase Length = 338 Back     alignment and structure
>pdb|3FM6|A Chain A, Crystal Structure Analysis Of Fungal Versatile Peroxidase From Pleurotus Eryngii Length = 331 Back     alignment and structure
>pdb|3VLH|A Chain A, Crystal Structure Analysis Of The Arg409leu Variants Of Katg From Haloarcula Marismortui Length = 737 Back     alignment and structure
>pdb|1UB2|A Chain A, Crystal Structure Of Catalase-Peroxidase From Synechococcus Pcc 7942 Length = 720 Back     alignment and structure
>pdb|1ITK|A Chain A, Crystal Structure Of Catalase-peroxidase From Haloarcula Marismortui Length = 731 Back     alignment and structure
>pdb|4FEF|A Chain A, The Crystal Structures Of Several Mutants Of Pleurotus Eryngii Versatile Peroxidase Length = 315 Back     alignment and structure
>pdb|3UW8|A Chain A, Crystal Structure Analysis Of The Ser305thr Variants Of Katg From Haloarcula Marismortui Length = 737 Back     alignment and structure
>pdb|3VLK|A Chain A, Crystal Structure Analysis Of The Ser305ala Variant Of Katg From Haloarcula Marismortui Length = 737 Back     alignment and structure
>pdb|4A5G|A Chain A, Raphanus Sativus Anionic Peroxidase. Length = 308 Back     alignment and structure
>pdb|3VLM|A Chain A, Crystal Structure Analysis Of The Met244ala Variant Of Katg From Haloarcula Marismortui Length = 737 Back     alignment and structure
>pdb|1B80|A Chain A, Rec. Lignin Peroxidase H8 Oxidatively Processed Length = 351 Back     alignment and structure
>pdb|1MWV|A Chain A, Crystal Structure Of Catalase-peroxidase Katg Of Burkholderia Pseudomallei Length = 714 Back     alignment and structure
>pdb|2DV1|A Chain A, Crystal Structure Of D141e Mutant Of Bpkatg Length = 748 Back     alignment and structure
>pdb|2DV2|A Chain A, Crystal Structure Of D141e Mutant Of Bpkatg At Ph 8.0 Length = 748 Back     alignment and structure
>pdb|1B82|A Chain A, Pristine Recomb. Lignin Peroxidase H8 Length = 351 Back     alignment and structure
>pdb|1B85|A Chain A, Lignin Peroxidase Length = 351 Back     alignment and structure
>pdb|3N3S|A Chain A, Crystal Structure Of The E198a Variant Of Burkholderia Pseudomallei Catalase-Peroxidase Katg With Inh Length = 748 Back     alignment and structure
>pdb|3N3R|A Chain A, Crystal Structure Of The E198a Variant Of Catalase-Peroxidase Katg Of Burkholderia Pseudomallei Length = 748 Back     alignment and structure
>pdb|1X7U|A Chain A, Crystal Structure Of The S324t Of Catalase-Peroxidase Katg Length = 748 Back     alignment and structure
>pdb|1FHF|A Chain A, The Structure Of Soybean Peroxidase Length = 304 Back     alignment and structure
>pdb|2FXG|A Chain A, Crystal Structure Of Katg At Ph 4.5 Length = 748 Back     alignment and structure
>pdb|3N3Q|A Chain A, Crystal Structure Of The S324t Variant Of Burkholderia Pseudomallei Katg With Isonicotinic Acid Hydrazide Bound Length = 748 Back     alignment and structure
>pdb|2FXJ|A Chain A, Crystal Structure Of Katg At Ph 8.5 Length = 748 Back     alignment and structure
>pdb|3UT2|A Chain A, Crystal Structure Of Fungal Magkatg2 Length = 764 Back     alignment and structure
>pdb|1BGP|A Chain A, Crystal Structure Of Barley Grain Peroxidase 1 Length = 309 Back     alignment and structure
>pdb|1PA2|A Chain A, Arabidopsis Thaliana Peroxidase A2 Length = 306 Back     alignment and structure
>pdb|1GX2|A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid Length = 309 Back     alignment and structure
>pdb|4ATJ|A Chain A, Distal Heme Pocket Mutant (H42e) Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid Length = 309 Back     alignment and structure
>pdb|3ATJ|A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid Length = 309 Back     alignment and structure
>pdb|1KZM|A Chain A, Distal Heme Pocket Mutant (r38s/h42e) Of Recombinant Horseradish Peroxidase C (hrp C) Length = 308 Back     alignment and structure
>pdb|6ATJ|A Chain A, Recombinant Horseradish Peroxidase C Complex With Ferulic Acid Length = 308 Back     alignment and structure
>pdb|1W4W|A Chain A, Ferric Horseradish Peroxidase C1a In Complex With Formate Length = 323 Back     alignment and structure
>pdb|1ATJ|A Chain A, Recombinant Horseradish Peroxidase C1a Length = 306 Back     alignment and structure
>pdb|2ATJ|A Chain A, Recombinant Horseradish Peroxidase Complex With Benzhydroxamic Acid Length = 308 Back     alignment and structure
>pdb|1GWO|A Chain A, Recombinant Horseradish Peroxidase C1a Ala170gln Length = 309 Back     alignment and structure
>pdb|1GWU|A Chain A, Recombinant Horseradish Peroxidase C1a Ala140gly Length = 309 Back     alignment and structure
>pdb|1GW2|A Chain A, Recombinant Horseradish Peroxidase C1a Thr171ser In Complex With Ferulic Acid Length = 308 Back     alignment and structure
>pdb|2YLJ|A Chain A, Horse Radish Peroxidase, Mutant S167y Length = 306 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query191
3riv_A271 Ascorbate peroxidase; alpha helical bundle, heme p 1e-108
2vcn_A261 Ascorbate peroxidase; INH, APX, isoniazid, oxidore 1e-101
3e2o_A294 CCP, cytochrome C peroxidase; cytochrome C peroxid 1e-100
1iyn_A295 Chloroplastic ascorbate peroxidase; hydrogen perox 4e-97
3m5q_A357 Manganese peroxidase 1; heme, Mn(II)-binding site, 3e-82
3q3u_A338 Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A 4e-82
1llp_A343 LIP4.15, lignin peroxidase; heme protein, glyco pr 3e-81
3fmu_A331 VersatIle peroxidase VPL2; class II (fungal) perox 1e-80
2e39_A344 Peroxidase; heme protein, coordination geometry of 3e-79
3rrw_A268 Thylakoid lumenal 29 kDa protein, chloroplastic; c 2e-50
1sch_A294 PNP, peanut peroxidase, major cationic isozyme; ca 8e-26
1bgp_A309 Barley grain peroxidase; chromoprotein, oxidoreduc 3e-25
3hdl_A304 Royal PALM TREE peroxidase; glycosylated, oxidored 2e-24
1qgj_A300 Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A 2e-24
1fhf_A304 SEED coat peroxidase; oxidoreductase; HET: HEM; 2. 5e-24
1pa2_A306 Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45 5e-23
1itk_A 731 Catalase-peroxidase; heme protein, oxidoreductase; 5e-23
1itk_A731 Catalase-peroxidase; heme protein, oxidoreductase; 2e-06
3n3r_A 748 Catalase-peroxidase; E198A variant, tuberclosis, i 5e-23
3ut2_A 764 Catalase-peroxidase 2; KATG, fungal, heme enzyme, 3e-22
3ut2_A764 Catalase-peroxidase 2; KATG, fungal, heme enzyme, 5e-07
1gwu_A309 Peroxidase C1A; oxidoreductase, glycoprotein, heme 4e-22
1ub2_A 720 Catalase-peroxidase; KATG, cyanobacteria, oxidored 2e-21
1ub2_A720 Catalase-peroxidase; KATG, cyanobacteria, oxidored 1e-06
2cca_A 740 Peroxidase/catalase T; oxidoreductase, catalase-pe 4e-21
2cca_A740 Peroxidase/catalase T; oxidoreductase, catalase-pe 4e-05
1u2k_A309 Peroxidase/catalase HPI; KATG, catalase-peroxidase 3e-06
>3riv_A Ascorbate peroxidase; alpha helical bundle, heme peroxidase, oxidoreductase; HET: HEM; 1.76A {Leishmania major} PDB: 3riw_A* Length = 271 Back     alignment and structure
 Score =  310 bits (796), Expect = e-108
 Identities = 91/206 (44%), Positives = 118/206 (57%), Gaps = 20/206 (9%)

Query: 1   MRLAAEQAHSANNGLDIAVRLLEPFKEQFPTISYADLYQLAGVVGVEVTGGPDIPFHPGR 60
           MR   E  ++ N GLDI  + LE  K+++P ISYADL+ LA  V +E  GGP IPF  GR
Sbjct: 55  MRFKPECLYAGNKGLDIPRKALETLKKKYPQISYADLWVLAAYVAIEYMGGPTIPFCWGR 114

Query: 61  DDKAEP---PQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSGFE 117
            D  +      +GRLPD  +   H+R+VF  ++G +D++ VAL G HT G CH E SG+ 
Sbjct: 115 VDAKDGSVCGPDGRLPDGSKTQSHVREVFR-RLGFNDQETVALIGAHTCGECHIEFSGYH 173

Query: 118 GPWTRNPLIFDNSYFTELLTGE----------------KDGLLQLPSDKALLDDPVFRPL 161
           GPWT +   FDNS+FT+LL  +                   L+ LPSD  LL DP +R  
Sbjct: 174 GPWTHDKNGFDNSFFTQLLDEDWVLNPKVEQMQLMDRATTKLMMLPSDVCLLLDPSYRKY 233

Query: 162 VEKYAADEDAFFADYAEAHLKLSELG 187
           VE YA D D F  D+A A  KL+ELG
Sbjct: 234 VELYAKDNDRFNKDFANAFKKLTELG 259
>2vcn_A Ascorbate peroxidase; INH, APX, isoniazid, oxidoreductase; HET: HEM ISZ; 1.20A {Glycine max} PDB: 2ggn_X* 2ghd_X* 2ghe_X* 2ghc_X* 2vnx_X* 2vnz_X* 2vo2_X* 2wd4_A* 1oaf_A* 1oag_A* 1v0h_X* 2ghh_X* 2ghk_X* 2vcf_X* 2cl4_X* 2vcs_A* 2xi6_A* 2xif_A* 2xih_A* 2xj6_A* ... Length = 261 Back     alignment and structure
>3e2o_A CCP, cytochrome C peroxidase; cytochrome C peroxidase (CCP), heme, hydrogen peroxide, iron, metal-binding, mitochondrion; HET: HEM; 1.06A {Saccharomyces cerevisiae} PDB: 1z53_A* 1kok_A* 1sbm_A* 1sdq_A* 1s73_A* 1zby_A* 1zbz_A* 2b0z_A* 2b10_A* 2b11_A* 2b12_A* 2cyp_A* 2ycg_A* 2v23_A* 1ebe_A* 3r98_A* 3r99_A* 1mkr_A* 1mk8_A* 1mkq_A* ... Length = 294 Back     alignment and structure
>1iyn_A Chloroplastic ascorbate peroxidase; hydrogen peroxide, tobacco plant, stromal ascorbate peroxidase, oxidoreductase; HET: HEM; 1.60A {Nicotiana tabacum} SCOP: a.93.1.1 Length = 295 Back     alignment and structure
>3m5q_A Manganese peroxidase 1; heme, Mn(II)-binding site, Ca(II)-binding site, glycosylation, ultrahigh resolution, calcium; HET: NAG MAN HEM; 0.93A {Phanerochaete chrysosporium} PDB: 1mnp_A* 1yyg_A* 1yzp_A* 1yzr_A* 1yyd_A* 3m8m_A* 1mn1_A* 1mn2_A* Length = 357 Back     alignment and structure
>3q3u_A Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A {Trametes cervina} Length = 338 Back     alignment and structure
>1llp_A LIP4.15, lignin peroxidase; heme protein, glyco protein,, oxidoreductase; HET: NAG MAN A2G HEM; 1.70A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1lga_A* 1b80_A* 1b82_A* 1b85_A* 1qpa_A* Length = 343 Back     alignment and structure
>3fmu_A VersatIle peroxidase VPL2; class II (fungal) peroxidases, protoporphyrin IX, electron T lignin peroxidase, lignin degradation; HET: HEM; 1.04A {Pleurotus eryngii} PDB: 3fjw_A* 2boq_A* 3fm1_A* 3fm4_A* 3fm6_A* 3fkg_A* 2w23_A* 2vka_A* Length = 331 Back     alignment and structure
>2e39_A Peroxidase; heme protein, coordination geometry of heme iron, ARP, perox oxidoreductase; HET: NAG MAN HEM; 1.30A {'arthromyces ramosus'} SCOP: a.93.1.1 PDB: 1arp_A* 1arv_A* 1arw_A* 1arx_A* 1ary_A* 1c8i_A* 1ck6_A* 1gza_A* 1gzb_A* 1hsr_A* 1aru_A* 2e3a_A* 2e3b_A* 1lyk_A* 1lyc_A* 1ly9_A* 1h3j_A* 1ly8_A* Length = 344 Back     alignment and structure
>3rrw_A Thylakoid lumenal 29 kDa protein, chloroplastic; chloroplast thylakoid lumen, plant protein; 2.50A {Arabidopsis thaliana} Length = 268 Back     alignment and structure
>1sch_A PNP, peanut peroxidase, major cationic isozyme; calcium binding, glycosylation, oxidoreductase; HET: NAG HEM; 2.56A {Arachis hypogaea} SCOP: a.93.1.1 Length = 294 Back     alignment and structure
>1bgp_A Barley grain peroxidase; chromoprotein, oxidoreductase; HET: HEM; 1.90A {Hordeum vulgare} SCOP: a.93.1.1 Length = 309 Back     alignment and structure
>3hdl_A Royal PALM TREE peroxidase; glycosylated, oxidoreductase; HET: HEM MES NAG FUC MAN; 1.85A {Roystonea regia} Length = 304 Back     alignment and structure
>1qgj_A Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A {Arabidopsis thaliana} SCOP: a.93.1.1 Length = 300 Back     alignment and structure
>1fhf_A SEED coat peroxidase; oxidoreductase; HET: HEM; 2.80A {Glycine max} SCOP: a.93.1.1 Length = 304 Back     alignment and structure
>1pa2_A Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45A {Arabidopsis thaliana} SCOP: a.93.1.1 PDB: 1qo4_A* Length = 306 Back     alignment and structure
>1itk_A Catalase-peroxidase; heme protein, oxidoreductase; HET: HEM; 2.00A {Haloarcula marismortui} SCOP: a.93.1.3 a.93.1.3 Length = 731 Back     alignment and structure
>1itk_A Catalase-peroxidase; heme protein, oxidoreductase; HET: HEM; 2.00A {Haloarcula marismortui} SCOP: a.93.1.3 a.93.1.3 Length = 731 Back     alignment and structure
>3n3r_A Catalase-peroxidase; E198A variant, tuberclosis, isonicotini hydrazide binding, oxidoreductase; HET: TOX HEM; 1.60A {Burkholderia pseudomallei} PDB: 3n3s_A* 3n3o_A* 2fxj_A* 3n3p_A* 2fxg_A* 3n3n_A* 2fxh_A* 2dv2_A* 3n3q_A* 2dv1_A* 1x7u_A* 1mwv_A* 2b2o_A* 2b2q_A* 2b2r_A* 2b2s_A* Length = 748 Back     alignment and structure
>3ut2_A Catalase-peroxidase 2; KATG, fungal, heme enzyme, oxidoreducta; HET: TOX HEM; 1.55A {Magnaporthe oryzae 70-15} Length = 764 Back     alignment and structure
>3ut2_A Catalase-peroxidase 2; KATG, fungal, heme enzyme, oxidoreducta; HET: TOX HEM; 1.55A {Magnaporthe oryzae 70-15} Length = 764 Back     alignment and structure
>1gwu_A Peroxidase C1A; oxidoreductase, glycoprotein, heme, multigene family, signal,; HET: HEM; 1.31A {Armoracia rusticana} SCOP: a.93.1.1 PDB: 1w4w_A* 1w4y_A* 1gwo_A* 2atj_A* 1gwt_A* 3atj_A* 1gx2_A* 7atj_A* 1h55_A* 1h58_A* 1h5a_A* 1h5c_A* 1h5d_A* 1h5e_A* 1h5f_A* 1h57_A* 1h5h_A* 1h5i_A* 1h5j_A* 1h5k_A* ... Length = 309 Back     alignment and structure
>1ub2_A Catalase-peroxidase; KATG, cyanobacteria, oxidoreductase; HET: HEM; 2.40A {Synechococcus elongatus} SCOP: a.93.1.3 a.93.1.3 Length = 720 Back     alignment and structure
>1ub2_A Catalase-peroxidase; KATG, cyanobacteria, oxidoreductase; HET: HEM; 2.40A {Synechococcus elongatus} SCOP: a.93.1.3 a.93.1.3 Length = 720 Back     alignment and structure
>2cca_A Peroxidase/catalase T; oxidoreductase, catalase-peroxidase, KATG, heme, hydrogen peroxide, iron, metal-binding, organic radical; HET: HEM; 2.0A {Mycobacterium tuberculosis} SCOP: a.93.1.3 a.93.1.3 PDB: 1sj2_A* 2ccd_A* Length = 740 Back     alignment and structure
>2cca_A Peroxidase/catalase T; oxidoreductase, catalase-peroxidase, KATG, heme, hydrogen peroxide, iron, metal-binding, organic radical; HET: HEM; 2.0A {Mycobacterium tuberculosis} SCOP: a.93.1.3 a.93.1.3 PDB: 1sj2_A* 2ccd_A* Length = 740 Back     alignment and structure
>1u2k_A Peroxidase/catalase HPI; KATG, catalase-peroxidase, C-terminal domain, oxidoreductase; 2.00A {Escherichia coli} SCOP: a.93.1.3 PDB: 1u2l_A 1u2j_A Length = 309 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query191
2vcn_A261 Ascorbate peroxidase; INH, APX, isoniazid, oxidore 100.0
1iyn_A295 Chloroplastic ascorbate peroxidase; hydrogen perox 100.0
3riv_A271 Ascorbate peroxidase; alpha helical bundle, heme p 100.0
3e2o_A294 CCP, cytochrome C peroxidase; cytochrome C peroxid 100.0
3hdl_A304 Royal PALM TREE peroxidase; glycosylated, oxidored 100.0
1sch_A294 PNP, peanut peroxidase, major cationic isozyme; ca 100.0
1fhf_A304 SEED coat peroxidase; oxidoreductase; HET: HEM; 2. 100.0
1pa2_A306 Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45 100.0
1gwu_A309 Peroxidase C1A; oxidoreductase, glycoprotein, heme 100.0
1bgp_A309 Barley grain peroxidase; chromoprotein, oxidoreduc 100.0
1qgj_A300 Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A 100.0
3fmu_A331 VersatIle peroxidase VPL2; class II (fungal) perox 100.0
3m5q_A357 Manganese peroxidase 1; heme, Mn(II)-binding site, 100.0
3q3u_A338 Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A 100.0
1u2k_A309 Peroxidase/catalase HPI; KATG, catalase-peroxidase 100.0
2e39_A344 Peroxidase; heme protein, coordination geometry of 100.0
1llp_A343 LIP4.15, lignin peroxidase; heme protein, glyco pr 100.0
2cca_A 740 Peroxidase/catalase T; oxidoreductase, catalase-pe 100.0
3vli_A 737 Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1 100.0
3ut2_A 764 Catalase-peroxidase 2; KATG, fungal, heme enzyme, 100.0
3n3r_A 748 Catalase-peroxidase; E198A variant, tuberclosis, i 100.0
1itk_A 731 Catalase-peroxidase; heme protein, oxidoreductase; 100.0
1ub2_A 720 Catalase-peroxidase; KATG, cyanobacteria, oxidored 100.0
3vli_A737 Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1 100.0
1ub2_A720 Catalase-peroxidase; KATG, cyanobacteria, oxidored 100.0
3n3r_A748 Catalase-peroxidase; E198A variant, tuberclosis, i 100.0
1itk_A731 Catalase-peroxidase; heme protein, oxidoreductase; 100.0
3ut2_A764 Catalase-peroxidase 2; KATG, fungal, heme enzyme, 100.0
2cca_A740 Peroxidase/catalase T; oxidoreductase, catalase-pe 100.0
3rrw_A268 Thylakoid lumenal 29 kDa protein, chloroplastic; c 100.0
>2vcn_A Ascorbate peroxidase; INH, APX, isoniazid, oxidoreductase; HET: HEM ISZ; 1.20A {Glycine max} PDB: 2ggn_X* 2ghd_X* 2ghe_X* 2ghc_X* 2vnx_X* 2vnz_X* 2vo2_X* 2wd4_A* 1oaf_A* 1oag_A* 1v0h_X* 2ghh_X* 2ghk_X* 2vcf_X* 2cl4_X* 2vcs_A* 2xi6_A* 2xif_A* 2xih_A* 2xj6_A* ... Back     alignment and structure
Probab=100.00  E-value=8.7e-65  Score=426.71  Aligned_cols=191  Identities=82%  Similarity=1.343  Sum_probs=184.9

Q ss_pred             CCChhhhcCcCcCChHHHHHHHHHHHHhCCCCChHHHHHHhHHHHHHhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCChH
Q 029599            1 MRLAAEQAHSANNGLDIAVRLLEPFKEQFPTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGND   80 (191)
Q Consensus         1 ir~~~E~~~~~N~gl~~~~~~i~~ik~~~~~VS~ADiialAa~~Av~~~ggP~~~v~~GR~D~~~~~~~~~lP~p~~~~~   80 (191)
                      |||++|+++++|.||.+++++|++||+++++|||||||+||||+||+++|||.|+|++||+|++++.++++||.|+.+++
T Consensus        71 i~~~~E~~~~~N~~l~~g~~~i~~iK~~~~~VScADilalAardaV~~~GGP~~~v~~GRrD~~~s~~~~~lP~p~~~~~  150 (261)
T 2vcn_A           71 IKHPAELAHSANNGLDIAVRLLEPLKAEFPILSYADFYQLAGVVAVEVTGGPEVPFHPGREDKPEPPPEGRLPDATKGSD  150 (261)
T ss_dssp             GGSHHHHTSGGGTTHHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHHTTCCCCCCCCCCCCCSSCCCSCCSCCTTCCHH
T ss_pred             ccchhhccCccccCHHHHHHHHHHHHHHhCCCCHHHHHHHHhhhheeeccCCcccCcCCCCCCCCCCcccccCCcccCHH
Confidence            68899999999999988999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcCCCccchhhccCCccccccccCCCCCCCCCCCCCCccChHHHHHHhhccCCCcccccccccccCCCChHH
Q 029599           81 HLRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSGFEGPWTRNPLIFDNSYFTELLTGEKDGLLQLPSDKALLDDPVFRP  160 (191)
Q Consensus        81 ~~~~~F~~~~Gl~~~e~VaL~GaHtiG~~~~~~~~~~~~~~~tp~~fDn~Yy~~l~~~~~~gl~~l~sD~~L~~d~~t~~  160 (191)
                      ++++.|++++||+++|||||+||||||.+||.+++|.|+|+.||.+|||+||++|+.++.+|+++|+||++|+.|++|++
T Consensus       151 ~l~~~F~~~~Gl~~~d~VaLsGaHTiG~ahc~r~~f~g~~~~tp~~FDN~Yy~~Ll~~~~~gll~L~SD~~L~~d~~t~~  230 (261)
T 2vcn_A          151 HLRDVFGKAMGLTDQDIVALSGGHTIGAAHKERSGFEGPWTSNPLIFDNSYFTELLSGEKEGLLQLPSDKALLSDPVFRP  230 (261)
T ss_dssp             HHHHHHTTTTCCCHHHHHHHHGGGGSCEECTTTTSCCEESSSCTTSCSTHHHHHHHHCCCTTCCCCHHHHHHHHCTTHHH
T ss_pred             HHHHHHHhhCCCChHHheeeccCcccccccccCCCCCCCCCCcccccchHHHHHhhccCcCCcccchhhHHHhcCccHHH
Confidence            99999977999999999999999999999999999999999999999999999999986679998899999999999999


Q ss_pred             HHHHhhhCHHHHHHHHHHHHHHHHhCCCCCC
Q 029599          161 LVEKYAADEDAFFADYAEAHLKLSELGFAEA  191 (191)
Q Consensus       161 ~v~~~A~d~~~f~~~F~~am~Km~~~gv~~~  191 (191)
                      +|+.||.|++.|+++|++||+||+++|+++.
T Consensus       231 ~V~~ya~~~~~F~~~Fa~Am~Km~~lg~~~~  261 (261)
T 2vcn_A          231 LVDKYAADEDAFFADYAEAHQKLSELGFADA  261 (261)
T ss_dssp             HHHHHHHCHHHHHHHHHHHHHHHHTTTSSCC
T ss_pred             HHHHHhhCHHHHHHHHHHHHHHHHhcCCCCC
Confidence            9999999999999999999999999999984
>1iyn_A Chloroplastic ascorbate peroxidase; hydrogen peroxide, tobacco plant, stromal ascorbate peroxidase, oxidoreductase; HET: HEM; 1.60A {Nicotiana tabacum} SCOP: a.93.1.1 Back     alignment and structure
>3riv_A Ascorbate peroxidase; alpha helical bundle, heme peroxidase, oxidoreductase; HET: HEM; 1.76A {Leishmania major} PDB: 3riw_A* 4ged_A* Back     alignment and structure
>3e2o_A CCP, cytochrome C peroxidase; cytochrome C peroxidase (CCP), heme, hydrogen peroxide, iron, metal-binding, mitochondrion; HET: HEM; 1.06A {Saccharomyces cerevisiae} SCOP: a.93.1.1 PDB: 4a71_A* 1z53_A* 1kok_A* 1sbm_A* 1sdq_A* 1s73_A* 1zby_A* 1zbz_A* 2b0z_A* 2b10_A* 2b11_A* 2b12_A* 2cyp_A* 2ycg_A* 4a6z_A* 2v23_A* 1ebe_A* 3r98_A* 3r99_A* 1mkr_A* ... Back     alignment and structure
>3hdl_A Royal PALM TREE peroxidase; glycosylated, oxidoreductase; HET: HEM MES NAG FUC MAN; 1.85A {Roystonea regia} SCOP: a.93.1.0 Back     alignment and structure
>1sch_A PNP, peanut peroxidase, major cationic isozyme; calcium binding, glycosylation, oxidoreductase; HET: NAG HEM; 2.56A {Arachis hypogaea} SCOP: a.93.1.1 Back     alignment and structure
>1fhf_A SEED coat peroxidase; oxidoreductase; HET: HEM; 2.80A {Glycine max} SCOP: a.93.1.1 Back     alignment and structure
>1pa2_A Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45A {Arabidopsis thaliana} SCOP: a.93.1.1 PDB: 1qo4_A* Back     alignment and structure
>1gwu_A Peroxidase C1A; oxidoreductase, glycoprotein, heme, multigene family, signal,; HET: HEM; 1.31A {Armoracia rusticana} SCOP: a.93.1.1 PDB: 1w4w_A* 1w4y_A* 1gwo_A* 2atj_A* 1gwt_A* 3atj_A* 1gx2_A* 7atj_A* 1h55_A* 1h58_A* 1h5a_A* 1h5c_A* 1h5d_A* 1h5e_A* 1h5f_A* 1h57_A* 1h5h_A* 1h5i_A* 1h5j_A* 1h5k_A* ... Back     alignment and structure
>1bgp_A Barley grain peroxidase; chromoprotein, oxidoreductase; HET: HEM; 1.90A {Hordeum vulgare} SCOP: a.93.1.1 Back     alignment and structure
>1qgj_A Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A {Arabidopsis thaliana} SCOP: a.93.1.1 Back     alignment and structure
>3fmu_A VersatIle peroxidase VPL2; class II (fungal) peroxidases, protoporphyrin IX, electron T lignin peroxidase, lignin degradation; HET: HEM; 1.04A {Pleurotus eryngii} PDB: 3fjw_A* 2boq_A* 3fm1_A* 3fm4_A* 3fm6_A* 3fkg_A* 2w23_A* 2vka_A* 4fcn_A* 4g05_A* 4fcs_A* 4fef_A* 4fdq_A* Back     alignment and structure
>3m5q_A Manganese peroxidase 1; heme, Mn(II)-binding site, Ca(II)-binding site, glycosylation, ultrahigh resolution, calcium; HET: NAG MAN HEM; 0.93A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1mnp_A* 1yyg_A* 1yzp_A* 1yzr_A* 1yyd_A* 3m8m_A* 1mn1_A* 1mn2_A* Back     alignment and structure
>3q3u_A Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A {Trametes cervina} SCOP: a.93.1.0 Back     alignment and structure
>1u2k_A Peroxidase/catalase HPI; KATG, catalase-peroxidase, C-terminal domain, oxidoreductase; 2.00A {Escherichia coli} SCOP: a.93.1.3 PDB: 1u2l_A 1u2j_A Back     alignment and structure
>2e39_A Peroxidase; heme protein, coordination geometry of heme iron, ARP, perox oxidoreductase; HET: NAG MAN HEM; 1.30A {'arthromyces ramosus'} SCOP: a.93.1.1 PDB: 1arp_A* 1arv_A* 1arw_A* 1arx_A* 1ary_A* 1c8i_A* 1ck6_A* 1gza_A* 1gzb_A* 1hsr_A* 1aru_A* 2e3a_A* 2e3b_A* 1lyk_A* 1lyc_A* 1ly9_A* 1h3j_A* 1ly8_A* Back     alignment and structure
>1llp_A LIP4.15, lignin peroxidase; heme protein, glyco protein,, oxidoreductase; HET: NAG MAN A2G HEM; 1.70A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1lga_A* 1b80_A* 1b82_A* 1b85_A* 1qpa_A* Back     alignment and structure
>2cca_A Peroxidase/catalase T; oxidoreductase, catalase-peroxidase, KATG, heme, hydrogen peroxide, iron, metal-binding, organic radical; HET: HEM; 2.0A {Mycobacterium tuberculosis} SCOP: a.93.1.3 a.93.1.3 PDB: 1sj2_A* 2ccd_A* Back     alignment and structure
>3vli_A Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1.70A {Haloarcula marismortui} PDB: 3vlh_A* 3vlj_A* 3vlk_A* 3vll_A* 3uw8_A* 3vlm_A* 1itk_A* Back     alignment and structure
>3ut2_A Catalase-peroxidase 2; KATG, fungal, heme enzyme, oxidoreducta; HET: TOX HEM; 1.55A {Magnaporthe oryzae 70-15} Back     alignment and structure
>3n3r_A Catalase-peroxidase; E198A variant, tuberclosis, isonicotini hydrazide binding, oxidoreductase; HET: TOX HEM; 1.60A {Burkholderia pseudomallei} PDB: 3n3s_A* 3n3o_A* 2fxj_A* 3n3p_A* 2fxg_A* 3n3n_A* 2fxh_A* 2dv2_A* 3n3q_A* 2dv1_A* 1x7u_A* 1mwv_A* 2b2o_A* 2b2q_A* 2b2r_A* 2b2s_A* Back     alignment and structure
>1itk_A Catalase-peroxidase; heme protein, oxidoreductase; HET: HEM; 2.00A {Haloarcula marismortui} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>1ub2_A Catalase-peroxidase; KATG, cyanobacteria, oxidoreductase; HET: HEM; 2.40A {Synechococcus elongatus} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>3vli_A Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1.70A {Haloarcula marismortui} PDB: 3vlh_A* 3vlj_A* 3vlk_A* 3vll_A* 3uw8_A* 3vlm_A* 1itk_A* Back     alignment and structure
>1ub2_A Catalase-peroxidase; KATG, cyanobacteria, oxidoreductase; HET: HEM; 2.40A {Synechococcus elongatus} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>3n3r_A Catalase-peroxidase; E198A variant, tuberclosis, isonicotini hydrazide binding, oxidoreductase; HET: TOX HEM; 1.60A {Burkholderia pseudomallei} PDB: 3n3s_A* 3n3o_A* 2fxj_A* 3n3p_A* 2fxg_A* 3n3n_A* 2fxh_A* 2dv2_A* 3n3q_A* 2dv1_A* 1x7u_A* 1mwv_A* 2b2o_A* 2b2q_A* 2b2r_A* 2b2s_A* Back     alignment and structure
>1itk_A Catalase-peroxidase; heme protein, oxidoreductase; HET: HEM; 2.00A {Haloarcula marismortui} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>3ut2_A Catalase-peroxidase 2; KATG, fungal, heme enzyme, oxidoreducta; HET: TOX HEM; 1.55A {Magnaporthe oryzae 70-15} Back     alignment and structure
>2cca_A Peroxidase/catalase T; oxidoreductase, catalase-peroxidase, KATG, heme, hydrogen peroxide, iron, metal-binding, organic radical; HET: HEM; 2.0A {Mycobacterium tuberculosis} SCOP: a.93.1.3 a.93.1.3 PDB: 1sj2_A* 2ccd_A* Back     alignment and structure
>3rrw_A Thylakoid lumenal 29 kDa protein, chloroplastic; chloroplast thylakoid lumen, plant protein; 2.50A {Arabidopsis thaliana} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 191
d1oafa_250 a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glyci 2e-65
d1yyda1357 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) { 2e-52
d2euta1291 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {B 9e-52
d2e39a1336 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) { 2e-50
d1llpa_343 a.93.1.1 (A:) Fungal peroxidase (ligninase) {White 9e-50
d1iyna_275 a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco 2e-47
d1pa2a_306 a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (A 1e-44
d1gwua_307 a.93.1.1 (A:) Plant peroxidase {Horseradish (Armor 2e-41
d1qgja_300 a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (A 2e-40
d1fhfa_304 a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine m 3e-40
d1bgpa_309 a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vu 3e-39
d1scha_294 a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hy 4e-39
d1mwva1406 a.93.1.3 (A:35-440) Catalase-peroxidase KatG {Burk 3e-34
d1ub2a1406 a.93.1.3 (A:21-426) Catalase-peroxidase KatG {Syne 4e-33
d1itka1406 a.93.1.3 (A:18-423) Catalase-peroxidase KatG {Arch 5e-33
d2ccaa1410 a.93.1.3 (A:26-435) Catalase-peroxidase KatG {Myco 2e-32
d1u2ka_292 a.93.1.3 (A:) Catalase-peroxidase KatG {Burkholder 4e-29
d1ub2a2294 a.93.1.3 (A:427-720) Catalase-peroxidase KatG {Syn 1e-26
d1itka2308 a.93.1.3 (A:424-731) Catalase-peroxidase KatG {Arc 3e-26
d1mwva2308 a.93.1.3 (A:441-748) Catalase-peroxidase KatG {Bur 2e-24
d2ccaa2285 a.93.1.3 (A:436-720) Catalase-peroxidase KatG {Myc 4e-20
>d1oafa_ a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glycine max) [TaxId: 3847]} Length = 250 Back     information, alignment and structure

class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: CCP-like
domain: Ascorbate peroxidase
species: Soybean (Glycine max) [TaxId: 3847]

 Score =  199 bits (507), Expect = 2e-65
 Identities = 156/191 (81%), Positives = 172/191 (90%)

Query: 1   MRLAAEQAHSANNGLDIAVRLLEPFKEQFPTISYADLYQLAGVVGVEVTGGPDIPFHPGR 60
           ++  AE AHSANNGLDIAVRLLEP K +FP +SYAD YQLAGVV VEVTGGP++PFHPGR
Sbjct: 60  IKHPAELAHSANNGLDIAVRLLEPLKAEFPILSYADFYQLAGVVAVEVTGGPEVPFHPGR 119

Query: 61  DDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSGFEGPW 120
           +DK EPP EGRLPDA +G+DHLR VFG  MGL+D+DIVALSGGHT+G  HKERSGFEGPW
Sbjct: 120 EDKPEPPPEGRLPDATKGSDHLRDVFGKAMGLTDQDIVALSGGHTIGAAHKERSGFEGPW 179

Query: 121 TRNPLIFDNSYFTELLTGEKDGLLQLPSDKALLDDPVFRPLVEKYAADEDAFFADYAEAH 180
           T NPLIFDNSYFTELL+GEK+GLLQLPSDKALL DPVFRPLV+KYAADEDAFFADYAEAH
Sbjct: 180 TSNPLIFDNSYFTELLSGEKEGLLQLPSDKALLSDPVFRPLVDKYAADEDAFFADYAEAH 239

Query: 181 LKLSELGFAEA 191
            KLSELGFA+A
Sbjct: 240 QKLSELGFADA 250
>d1yyda1 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) {Basidomycetos fungus (Phanerochaete chrysosporium) [TaxId: 5306]} Length = 357 Back     information, alignment and structure
>d2euta1 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 291 Back     information, alignment and structure
>d2e39a1 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) {Arthromyces ramosus [TaxId: 5451]} Length = 336 Back     information, alignment and structure
>d1llpa_ a.93.1.1 (A:) Fungal peroxidase (ligninase) {White rot basidiomycete (Phanerochaete chrysosporium) [TaxId: 5306]} Length = 343 Back     information, alignment and structure
>d1iyna_ a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Length = 275 Back     information, alignment and structure
>d1pa2a_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase A2 [TaxId: 3702]} Length = 306 Back     information, alignment and structure
>d1gwua_ a.93.1.1 (A:) Plant peroxidase {Horseradish (Armoracia rusticana) [TaxId: 3704]} Length = 307 Back     information, alignment and structure
>d1qgja_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase N [TaxId: 3702]} Length = 300 Back     information, alignment and structure
>d1fhfa_ a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine max) [TaxId: 3847]} Length = 304 Back     information, alignment and structure
>d1bgpa_ a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vulgare), peroxidase 1 [TaxId: 4513]} Length = 309 Back     information, alignment and structure
>d1scha_ a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hypogaea) [TaxId: 3818]} Length = 294 Back     information, alignment and structure
>d1mwva1 a.93.1.3 (A:35-440) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Length = 406 Back     information, alignment and structure
>d1ub2a1 a.93.1.3 (A:21-426) Catalase-peroxidase KatG {Synechococcus sp. pcc 7942 [TaxId: 1140]} Length = 406 Back     information, alignment and structure
>d1itka1 a.93.1.3 (A:18-423) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]} Length = 406 Back     information, alignment and structure
>d2ccaa1 a.93.1.3 (A:26-435) Catalase-peroxidase KatG {Mycobacterium tuberculosis [TaxId: 1773]} Length = 410 Back     information, alignment and structure
>d1u2ka_ a.93.1.3 (A:) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Length = 292 Back     information, alignment and structure
>d1ub2a2 a.93.1.3 (A:427-720) Catalase-peroxidase KatG {Synechococcus sp. pcc 7942 [TaxId: 1140]} Length = 294 Back     information, alignment and structure
>d1itka2 a.93.1.3 (A:424-731) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]} Length = 308 Back     information, alignment and structure
>d1mwva2 a.93.1.3 (A:441-748) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Length = 308 Back     information, alignment and structure
>d2ccaa2 a.93.1.3 (A:436-720) Catalase-peroxidase KatG {Mycobacterium tuberculosis [TaxId: 1773]} Length = 285 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query191
d1oafa_250 Ascorbate peroxidase {Soybean (Glycine max) [TaxId 100.0
d1iyna_275 Ascorbate peroxidase {Common tobacco (Nicotiana ta 100.0
d2euta1291 Cytochrome c peroxidase, CCP {Baker's yeast (Sacch 100.0
d1fhfa_304 Plant peroxidase {Soybean (Glycine max) [TaxId: 38 100.0
d1pa2a_306 Plant peroxidase {Mouse-ear cress (Arabidopsis tha 100.0
d1yyda1357 Fungal peroxidase (ligninase) {Basidomycetos fungu 100.0
d2e39a1336 Fungal peroxidase (ligninase) {Arthromyces ramosus 100.0
d1llpa_343 Fungal peroxidase (ligninase) {White rot basidiomy 100.0
d1qgja_300 Plant peroxidase {Mouse-ear cress (Arabidopsis tha 100.0
d1bgpa_309 Plant peroxidase {Barley (Hordeum vulgare), peroxi 100.0
d1scha_294 Plant peroxidase {Peanut (Arachis hypogaea) [TaxId 100.0
d1gwua_307 Plant peroxidase {Horseradish (Armoracia rusticana 100.0
d1itka1406 Catalase-peroxidase KatG {Archaeon Haloarcula mari 100.0
d1mwva1406 Catalase-peroxidase KatG {Burkholderia pseudomalle 100.0
d1mwva2308 Catalase-peroxidase KatG {Burkholderia pseudomalle 100.0
d1u2ka_292 Catalase-peroxidase KatG {Burkholderia pseudomalle 100.0
d2ccaa1410 Catalase-peroxidase KatG {Mycobacterium tuberculos 100.0
d1ub2a2294 Catalase-peroxidase KatG {Synechococcus sp. pcc 79 100.0
d1ub2a1406 Catalase-peroxidase KatG {Synechococcus sp. pcc 79 100.0
d1itka2308 Catalase-peroxidase KatG {Archaeon Haloarcula mari 100.0
d2ccaa2285 Catalase-peroxidase KatG {Mycobacterium tuberculos 100.0
>d1oafa_ a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glycine max) [TaxId: 3847]} Back     information, alignment and structure
class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: CCP-like
domain: Ascorbate peroxidase
species: Soybean (Glycine max) [TaxId: 3847]

Probab=100.00  E-value=2.2e-61  Score=402.81  Aligned_cols=190  Identities=82%  Similarity=1.340  Sum_probs=183.5

Q ss_pred             CCChhhhcCcCcCChHHHHHHHHHHHHhCCCCChHHHHHHhHHHHHHhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCChH
Q 029599            1 MRLAAEQAHSANNGLDIAVRLLEPFKEQFPTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGND   80 (191)
Q Consensus         1 ir~~~E~~~~~N~gl~~~~~~i~~ik~~~~~VS~ADiialAa~~Av~~~ggP~~~v~~GR~D~~~~~~~~~lP~p~~~~~   80 (191)
                      |++.+|+++++|.||+.+.++++++|++||.|||||||+|||++||+++|||.|+|++||+|+..+.+++.+|.|+.+++
T Consensus        60 ~~~~~E~~~~~N~Gl~~i~~~~~~~~~~~p~VS~ADiialAa~~Av~~~GGp~~~~~~GR~D~~~~~~~g~~P~p~~~~~  139 (250)
T d1oafa_          60 IKHPAELAHSANNGLDIAVRLLEPLKAEFPILSYADFYQLAGVVAVEVTGGPEVPFHPGREDKPEPPPEGRLPDATKGSD  139 (250)
T ss_dssp             GGSHHHHTSGGGTTHHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHHTTCCCCCCCCCCCCCSSCCCSCCSCCTTCCHH
T ss_pred             cccccccccccccCHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHhcCCceeccCCCCccccCCCCcccCCChHHHHH
Confidence            57889999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHH-hcCCCccchhhccCCccccccccCCCCCCCCCCCCCCccChHHHHHHhhccCCCcccccccccccCCCChH
Q 029599           81 HLRQVFGA-QMGLSDKDIVALSGGHTLGRCHKERSGFEGPWTRNPLIFDNSYFTELLTGEKDGLLQLPSDKALLDDPVFR  159 (191)
Q Consensus        81 ~~~~~F~~-~~Gl~~~e~VaL~GaHtiG~~~~~~~~~~~~~~~tp~~fDn~Yy~~l~~~~~~gl~~l~sD~~L~~d~~t~  159 (191)
                      ++++.| . ++||+.+|||||+||||||.+||..+++.++|+.||.+|||+||++|+.++++|+++|+||+.|+.|++|+
T Consensus       140 ~l~~~F-~~~~Gl~~~e~VaL~GaHTiG~~h~~~s~~~~~~~~tP~~fDN~Yf~~ll~~~~~gl~~l~SD~~L~~d~~t~  218 (250)
T d1oafa_         140 HLRDVF-GKAMGLTDQDIVALSGGHTIGAAHKERSGFEGPWTSNPLIFDNSYFTELLSGEKEGLLQLPSDKALLSDPVFR  218 (250)
T ss_dssp             HHHHHH-TTTTCCCHHHHHHHHGGGGSCEECTTTTSCCEESSSCTTCCSTHHHHHHHHCCCTTCCCCHHHHHHHHSTTHH
T ss_pred             HHHHHH-HHhcCCCHHHHHHHhhhhhhhhhcccccccccccccccchhhhHHHHHHHhccccccccCHHHHHHhhCHHHH
Confidence            999999 6 58999999999999999999999999999999999999999999999998778999999999999999999


Q ss_pred             HHHHHhhhCHHHHHHHHHHHHHHHHhCCCCCC
Q 029599          160 PLVEKYAADEDAFFADYAEAHLKLSELGFAEA  191 (191)
Q Consensus       160 ~~v~~~A~d~~~f~~~F~~am~Km~~~gv~~~  191 (191)
                      ++|+.||.|++.|+++|+.||+||+++||+.+
T Consensus       219 ~~v~~~A~d~~~F~~~Fa~Am~Km~~lGv~~~  250 (250)
T d1oafa_         219 PLVDKYAADEDAFFADYAEAHQKLSELGFADA  250 (250)
T ss_dssp             HHHHHHHHCHHHHHHHHHHHHHHHHTTTSSCC
T ss_pred             HHHHHHhcCHHHHHHHHHHHHHHHHhcCCCCC
Confidence            99999999999999999999999999999864
>d1iyna_ a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Back     information, alignment and structure
>d2euta1 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1fhfa_ a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine max) [TaxId: 3847]} Back     information, alignment and structure
>d1pa2a_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase A2 [TaxId: 3702]} Back     information, alignment and structure
>d1yyda1 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) {Basidomycetos fungus (Phanerochaete chrysosporium) [TaxId: 5306]} Back     information, alignment and structure
>d2e39a1 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) {Arthromyces ramosus [TaxId: 5451]} Back     information, alignment and structure
>d1llpa_ a.93.1.1 (A:) Fungal peroxidase (ligninase) {White rot basidiomycete (Phanerochaete chrysosporium) [TaxId: 5306]} Back     information, alignment and structure
>d1qgja_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase N [TaxId: 3702]} Back     information, alignment and structure
>d1bgpa_ a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vulgare), peroxidase 1 [TaxId: 4513]} Back     information, alignment and structure
>d1scha_ a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hypogaea) [TaxId: 3818]} Back     information, alignment and structure
>d1gwua_ a.93.1.1 (A:) Plant peroxidase {Horseradish (Armoracia rusticana) [TaxId: 3704]} Back     information, alignment and structure
>d1itka1 a.93.1.3 (A:18-423) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]} Back     information, alignment and structure
>d1mwva1 a.93.1.3 (A:35-440) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d1mwva2 a.93.1.3 (A:441-748) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d1u2ka_ a.93.1.3 (A:) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d2ccaa1 a.93.1.3 (A:26-435) Catalase-peroxidase KatG {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1ub2a2 a.93.1.3 (A:427-720) Catalase-peroxidase KatG {Synechococcus sp. pcc 7942 [TaxId: 1140]} Back     information, alignment and structure
>d1ub2a1 a.93.1.3 (A:21-426) Catalase-peroxidase KatG {Synechococcus sp. pcc 7942 [TaxId: 1140]} Back     information, alignment and structure
>d1itka2 a.93.1.3 (A:424-731) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]} Back     information, alignment and structure
>d2ccaa2 a.93.1.3 (A:436-720) Catalase-peroxidase KatG {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure