Citrus Sinensis ID: 029619
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 190 | ||||||
| 147844086 | 634 | hypothetical protein VITISV_043971 [Viti | 1.0 | 0.299 | 0.715 | 3e-77 | |
| 225450195 | 233 | PREDICTED: thaumatin-like protein-like, | 1.0 | 0.815 | 0.715 | 6e-75 | |
| 4586372 | 238 | thaumatin-like protein SE39b [Nicotiana | 1.0 | 0.798 | 0.675 | 5e-71 | |
| 255544244 | 234 | Zeamatin precursor, putative [Ricinus co | 0.994 | 0.807 | 0.657 | 5e-70 | |
| 449436271 | 234 | PREDICTED: thaumatin-like protein-like [ | 1.0 | 0.811 | 0.657 | 4e-69 | |
| 356542385 | 236 | PREDICTED: thaumatin-like protein-like [ | 1.0 | 0.805 | 0.643 | 2e-67 | |
| 297844894 | 244 | hypothetical protein ARALYDRAFT_472154 [ | 0.984 | 0.766 | 0.637 | 3e-66 | |
| 60543124 | 240 | thaumatin-like protein [Cryptomeria japo | 0.989 | 0.783 | 0.634 | 3e-65 | |
| 30686314 | 247 | pathogenesis-related thaumatin-like prot | 0.994 | 0.765 | 0.630 | 4e-65 | |
| 359489343 | 262 | PREDICTED: LOW QUALITY PROTEIN: pathogen | 1.0 | 0.725 | 0.663 | 2e-64 |
| >gi|147844086|emb|CAN80000.1| hypothetical protein VITISV_043971 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 293 bits (749), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 136/190 (71%), Positives = 152/190 (80%)
Query: 1 MNGGVRLNAGENIKIEAPKGWSGRFWPRTGCTFDQSGNGKCVTGDCGAKLNCNGAGGEPP 60
M+GG L GE++ I AP+GWSGRFW R C+FD SG G CVTGDCG L C GAGG PP
Sbjct: 445 MDGGFELRPGESVDITAPEGWSGRFWGRRRCSFDDSGKGSCVTGDCGGVLKCAGAGGAPP 504
Query: 61 VSLAEFTLDSPEDFYDVSLVDGYNVPMSIIPSGGTGGCKSVNCVSDLNTKCPEDLQQKDT 120
+LAEFTLDSP DFYDVSLVDGYN+P+SI+PSGG+G CK+V CVSDLN CP+DLQ
Sbjct: 505 ATLAEFTLDSPVDFYDVSLVDGYNMPVSILPSGGSGECKTVRCVSDLNQHCPKDLQVLRD 564
Query: 121 GRVVACKSACMAFNTPEYCCTGAFGGPNTCKPTNYSKIFKESCPDAYSYAYDDLTSTFTC 180
GRVVAC SACMAFN PEYCC+GAF P+TCKPT YSK+FK SCP +YSYAYDD TSTFTC
Sbjct: 565 GRVVACNSACMAFNKPEYCCSGAFSTPDTCKPTEYSKVFKASCPTSYSYAYDDPTSTFTC 624
Query: 181 KDANYTISFC 190
K ANY I FC
Sbjct: 625 KGANYLIRFC 634
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225450195|ref|XP_002264550.1| PREDICTED: thaumatin-like protein-like, partial [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|4586372|dbj|BAA74546.2| thaumatin-like protein SE39b [Nicotiana tabacum] | Back alignment and taxonomy information |
|---|
| >gi|255544244|ref|XP_002513184.1| Zeamatin precursor, putative [Ricinus communis] gi|223547682|gb|EEF49175.1| Zeamatin precursor, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|449436271|ref|XP_004135916.1| PREDICTED: thaumatin-like protein-like [Cucumis sativus] gi|449521932|ref|XP_004167983.1| PREDICTED: thaumatin-like protein-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|356542385|ref|XP_003539647.1| PREDICTED: thaumatin-like protein-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|297844894|ref|XP_002890328.1| hypothetical protein ARALYDRAFT_472154 [Arabidopsis lyrata subsp. lyrata] gi|297336170|gb|EFH66587.1| hypothetical protein ARALYDRAFT_472154 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
| >gi|60543124|dbj|BAD90814.1| thaumatin-like protein [Cryptomeria japonica] | Back alignment and taxonomy information |
|---|
| >gi|30686314|ref|NP_173365.2| pathogenesis-related thaumatin-like protein [Arabidopsis thaliana] gi|8778412|gb|AAF79420.1|AC025808_2 F18O14.4 [Arabidopsis thaliana] gi|48310686|gb|AAT41867.1| At1g19320 [Arabidopsis thaliana] gi|332191708|gb|AEE29829.1| pathogenesis-related thaumatin-like protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|359489343|ref|XP_003633912.1| PREDICTED: LOW QUALITY PROTEIN: pathogenesis-related protein 5-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 190 | ||||||
| TAIR|locus:2016442 | 247 | AT1G19320 "AT1G19320" [Arabido | 0.994 | 0.765 | 0.630 | 9.2e-68 | |
| TAIR|locus:2037235 | 239 | PR5 "AT1G75040" [Arabidopsis t | 0.984 | 0.782 | 0.659 | 9.2e-68 | |
| TAIR|locus:2037227 | 246 | AT1G75050 "AT1G75050" [Arabido | 0.989 | 0.764 | 0.621 | 1.5e-65 | |
| TAIR|locus:2194344 | 244 | ATLP-1 [Arabidopsis thaliana ( | 0.989 | 0.770 | 0.631 | 2e-65 | |
| TAIR|locus:2027161 | 246 | TLP-3 "AT1G75030" [Arabidopsis | 0.989 | 0.764 | 0.608 | 3.7e-64 | |
| TAIR|locus:2027864 | 264 | AT1G73620 [Arabidopsis thalian | 0.989 | 0.712 | 0.615 | 6e-64 | |
| TAIR|locus:2203236 | 356 | AT1G77700 "AT1G77700" [Arabido | 0.978 | 0.522 | 0.569 | 5e-60 | |
| TAIR|locus:2121189 | 345 | AT4G38660 "AT4G38660" [Arabido | 0.968 | 0.533 | 0.566 | 5e-60 | |
| TAIR|locus:2153929 | 420 | AT5G24620 [Arabidopsis thalian | 0.984 | 0.445 | 0.553 | 1.7e-59 | |
| TAIR|locus:2198641 | 316 | AT1G20030 "AT1G20030" [Arabido | 0.984 | 0.591 | 0.581 | 4.5e-59 |
| TAIR|locus:2016442 AT1G19320 "AT1G19320" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 688 (247.2 bits), Expect = 9.2e-68, P = 9.2e-68
Identities = 123/195 (63%), Positives = 142/195 (72%)
Query: 2 NGGVRLNAGENIKIEAPKGWSGRFWPRTGCTFDQSGNGKCVTGDCGAKLNCNGAGGEPPV 61
+GG L +G ++ GWSGRFW RT C FD SG+GKC TGDCG+KL C GAGG PP
Sbjct: 52 DGGFALASGSSVTFTVSPGWSGRFWARTYCNFDASGSGKCGTGDCGSKLKCAGAGGAPPA 111
Query: 62 SLAEFTLDSP------EDFYDVSLVDGYNVPMSIIPSGGTGGCKSVNCVSDLNTKCPEDL 115
+LAEFT+ S +DFYDVSLVDGYNV M I P GG+G CK+ CVSD+N CP++L
Sbjct: 112 TLAEFTIGSSGKKNAVQDFYDVSLVDGYNVQMKITPQGGSGDCKTAGCVSDVNAICPKEL 171
Query: 116 QQKDTGRVVACKSACMAFNTPEYCCTGAFGGPNTCKPTNYSKIFKESCPDAYSYAYDDLT 175
Q V ACKSAC AFN PEYCCTGA+ P TC PTNYSKIFK++CP AYSYAYDD +
Sbjct: 172 QVTGPSGVAACKSACEAFNKPEYCCTGAYSTPATCPPTNYSKIFKQACPSAYSYAYDDAS 231
Query: 176 STFTCKDANYTISFC 190
STFTC +ANY ISFC
Sbjct: 232 STFTCTNANYEISFC 246
|
|
| TAIR|locus:2037235 PR5 "AT1G75040" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2037227 AT1G75050 "AT1G75050" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2194344 ATLP-1 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2027161 TLP-3 "AT1G75030" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2027864 AT1G73620 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2203236 AT1G77700 "AT1G77700" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2121189 AT4G38660 "AT4G38660" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2153929 AT5G24620 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2198641 AT1G20030 "AT1G20030" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 190 | |||
| cd09218 | 219 | cd09218, TLP-PA, allergenic/antifungal thaumatin-l | 1e-105 | |
| pfam00314 | 212 | pfam00314, Thaumatin, Thaumatin family | 1e-101 | |
| smart00205 | 218 | smart00205, THN, Thaumatin family | 1e-87 | |
| cd09219 | 229 | cd09219, TLP-F, thaumatin-like proteins: basidiomy | 7e-34 | |
| cd09217 | 151 | cd09217, TLP-P, thaumatin and allergenic/antifunga | 9e-32 | |
| cd09215 | 157 | cd09215, Thaumatin-like, the sweet-tasting protein | 8e-31 | |
| cd08961 | 153 | cd08961, GH64-TLP-SF, glycoside hydrolase family 6 | 8e-29 |
| >gnl|CDD|185757 cd09218, TLP-PA, allergenic/antifungal thaumatin-like proteins: plant and animal homologs | Back alignment and domain information |
|---|
Score = 301 bits (772), Expect = e-105
Identities = 127/193 (65%), Positives = 148/193 (76%), Gaps = 4/193 (2%)
Query: 2 NGGVRLNAGENIKIEAPKGWSGRFWPRTGCTFDQSGNGKCVTGDCGAKLNCNGAGGEPPV 61
GG L G++ I+AP GWSGRFW RTGC+FD SG G C TGDCG L CNGAGG PP
Sbjct: 27 GGGFELAPGQSRTIDAPSGWSGRFWGRTGCSFDSSGKGSCATGDCGGGLECNGAGGAPPA 86
Query: 62 SLAEFTL--DSPEDFYDVSLVDGYNVPMSIIPSGGTGGCKSVNCVSDLNTKCPEDLQQKD 119
+LAEFTL +DFYDVSLVDGYN+P+SI P GG+GGC++ CV+DLN CP +LQ K+
Sbjct: 87 TLAEFTLGGSGGQDFYDVSLVDGYNLPVSITPQGGSGGCRTAGCVADLNAVCPAELQVKN 146
Query: 120 T-GRVVACKSACMAFNTPEYCCTGAFGGPNTCKPTNYSKIFKESCPDAYSYAYDDLTSTF 178
+ GRVVACKSAC+AFNT EYCC GA+G P TCKPT YS++FK +CP AYSYAYDD TSTF
Sbjct: 147 SGGRVVACKSACLAFNTDEYCCRGAYGTPETCKPTTYSRLFKNACPQAYSYAYDDPTSTF 206
Query: 179 TCKDA-NYTISFC 190
TC NY I+FC
Sbjct: 207 TCSSGANYVITFC 219
|
This subfamily is represented by the thaumatin-like proteins (TLPs), Cherry Allergen Pru Av 2 TLP, Peach PpAZ44 TLP (a propylene-induced TLP in abscission), the Caenorhabditis elegans thaumatin family member (thn-6), and other plant and animal homologs. TLPs are involved in host defense and a wide range of developmental processes in fungi, plants, and animals. Due to their inducible expression by environmental stresses such as pathogen/pest attack, drought and cold, plant TLPs are classified as the pathogenesis-related (PR) protein family 5 (PR5). Several members of the plant TLP family have been reported as food allergens from fruits (i.e., cherry, Pru av 2; bell pepper, Cap a1; tomatoes, Lyc e NP24) and pollen allergens from conifers (i.e., mountain cedar, Jun a 3; Arizona cypress, Cup a3; Japanese cedar, Cry j3). TLPs are three-domain, crescent-fold structures with either an electronegative, electropositive, or neutral cleft occurring between domains I and II. It has been proposed that the antifungal activity of plant PR5 proteins relies on the strong electronegative character of this cleft. Some TLPs hydrolyze the beta-1,3-glucans of the type commonly found in fungal walls. TLPs within this subfamily contain 16 conserved Cys residues. Length = 219 |
| >gnl|CDD|215853 pfam00314, Thaumatin, Thaumatin family | Back alignment and domain information |
|---|
| >gnl|CDD|128501 smart00205, THN, Thaumatin family | Back alignment and domain information |
|---|
| >gnl|CDD|185758 cd09219, TLP-F, thaumatin-like proteins: basidiomycete homologs | Back alignment and domain information |
|---|
| >gnl|CDD|185756 cd09217, TLP-P, thaumatin and allergenic/antifungal thaumatin-like proteins: plant homologs | Back alignment and domain information |
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| >gnl|CDD|185754 cd09215, Thaumatin-like, the sweet-tasting protein, thaumatin, and thaumatin-like proteins involved in host defense | Back alignment and domain information |
|---|
| >gnl|CDD|185752 cd08961, GH64-TLP-SF, glycoside hydrolase family 64 (beta-1,3-glucanases which produce specific pentasaccharide oligomers) and thaumatin-like proteins | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 190 | |||
| cd09218 | 219 | TLP-PA allergenic/antifungal thaumatin-like protei | 100.0 | |
| smart00205 | 218 | THN Thaumatin family. The thaumatin family gathers | 100.0 | |
| cd09219 | 229 | TLP-F thaumatin-like proteins: basidiomycete homol | 100.0 | |
| PF00314 | 213 | Thaumatin: Thaumatin family; InterPro: IPR001938 T | 100.0 | |
| cd09215 | 157 | Thaumatin-like the sweet-tasting protein, thaumati | 100.0 | |
| cd09217 | 151 | TLP-P thaumatin and allergenic/antifungal thaumati | 100.0 | |
| cd08961 | 153 | GH64-TLP-SF glycoside hydrolase family 64 (beta-1, | 100.0 | |
| cd09216 | 353 | GH64-LPHase-like glycoside hydrolase family 64: la | 95.13 | |
| cd09220 | 369 | GH64-GluB-like glycoside hydrolase family 64: beta | 94.7 | |
| PF04681 | 155 | Bys1: Blastomyces yeast-phase-specific protein; In | 93.84 | |
| cd09214 | 319 | GH64-like glycosyl hydrolase 64 family. This famil | 80.57 |
| >cd09218 TLP-PA allergenic/antifungal thaumatin-like proteins: plant and animal homologs | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-78 Score=507.61 Aligned_cols=189 Identities=68% Similarity=1.368 Sum_probs=182.1
Q ss_pred CCCeEeCCCCeEEEecCCCceeeeeeccCCCCCCCCCccccccCCCCcccCCCCCCCCCcceeEEeeCCC--Cccccccc
Q 029619 2 NGGVRLNAGENIKIEAPKGWSGRFWPRTGCTFDQSGNGKCVTGDCGAKLNCNGAGGEPPVSLAEFTLDSP--EDFYDVSL 79 (190)
Q Consensus 2 ~~G~~L~pg~s~~~~vp~~WsGriWaRtgCs~~~~g~~~C~TGdC~g~~~C~~~~~~~p~TlaEftl~~~--~d~YdvSl 79 (190)
++||+|+||++++|+||+.|+|||||||+|++|+.|+++|+||||++.|+|++.+++||+|||||+|+.. +|||||||
T Consensus 27 ~gGf~L~~g~s~~~~vp~~WsGriWaRTgC~~~~~g~~~C~TGDCgg~l~C~g~~g~pP~TlaEftl~~~~~~d~YdvSl 106 (219)
T cd09218 27 GGGFELAPGQSRTIDAPSGWSGRFWGRTGCSFDSSGKGSCATGDCGGGLECNGAGGAPPATLAEFTLGGSGGQDFYDVSL 106 (219)
T ss_pred CCCEEcCCCCeEEEeCCCCcceeeeeccCCCCCCCCccccccCCCCCeeecCCCCCCCCceeEEEEeccCCCCcceeeee
Confidence 4899999999999999999999999999999999999999999999999999888899999999999864 89999999
Q ss_pred cccccCceeEeecCCCCCCccccccccCccCCCCCccccc-cCceeccchhhhhcCCCccccCCCCCCCCCCCCCcchhH
Q 029619 80 VDGYNVPMSIIPSGGTGGCKSVNCVSDLNTKCPEDLQQKD-TGRVVACKSACMAFNTPEYCCTGAFGGPNTCKPTNYSKI 158 (190)
Q Consensus 80 VdG~NlP~~i~p~~g~~~C~~~~C~~dl~~~CP~~l~~~~-~g~~v~C~SaC~~~~~~~~CC~g~~~~~~~C~pt~ys~~ 158 (190)
||||||||+|+|+++...|+..+|.+|||+.||.||||++ +|+||||||||++|++|||||+|+|.+|++|+|+.||++
T Consensus 107 VdGfNlP~~i~P~~~~~~C~~~~C~~din~~CP~~L~v~~~~g~vv~C~SaC~~f~~~~~CC~g~~~~p~~C~pt~ys~~ 186 (219)
T cd09218 107 VDGYNLPVSITPQGGSGGCRTAGCVADLNAVCPAELQVKNSGGRVVACKSACLAFNTDEYCCRGAYGTPETCKPTTYSRL 186 (219)
T ss_pred eccccCCEEEEecCCCCCCCCCcccCcccccCCHHHeeccCCCcEeeecCHHHhhCCccceecCCCCCCCcCCCcchhHH
Confidence 9999999999998766689999999999999999999997 789999999999999999999999999999999999999
Q ss_pred HhhcCCCccccccCCCCCceee-cCCCeEEEeC
Q 029619 159 FKESCPDAYSYAYDDLTSTFTC-KDANYTISFC 190 (190)
Q Consensus 159 fK~~CP~AYsy~~Dd~ts~ftC-~~~~y~vtFC 190 (190)
||++||+||+|||||++++|+| ++++|+|+||
T Consensus 187 FK~~CP~Aysya~Dd~~s~~tC~~~~~Y~I~FC 219 (219)
T cd09218 187 FKNACPQAYSYAYDDPTSTFTCSSGANYVITFC 219 (219)
T ss_pred HHhhCccccccCCCCCCcceEcCCCCCEEEEeC
Confidence 9999999999999999999999 5799999999
|
This subfamily is represented by the thaumatin-like proteins (TLPs), Cherry Allergen Pru Av 2 TLP, Peach PpAZ44 TLP (a propylene-induced TLP in abscission), the Caenorhabditis elegans thaumatin family member (thn-6), and other plant and animal homologs. TLPs are involved in host defense and a wide range of developmental processes in fungi, plants, and animals. Due to their inducible expression by environmental stresses such as pathogen/pest attack, drought and cold, plant TLPs are classified as the pathogenesis-related (PR) protein family 5 (PR5). Several members of the plant TLP family have been reported as food allergens from fruits (i.e., cherry, Pru av 2; bell pepper, Cap a1; tomatoes, Lyc e NP24) and pollen allergens from conifers (i.e., mountain cedar, Jun a 3; Arizona cypress, Cup a3; Japanese cedar, Cry j3). TLPs are three-domain, crescent-fold structures with either an electronegative, ele |
| >smart00205 THN Thaumatin family | Back alignment and domain information |
|---|
| >cd09219 TLP-F thaumatin-like proteins: basidiomycete homologs | Back alignment and domain information |
|---|
| >PF00314 Thaumatin: Thaumatin family; InterPro: IPR001938 Thaumatin [] is an intensely sweet-tasting protein, 100 000 times sweeter than sucrose on a molar basis [] found in berries from Thaumatococcus daniellii, a tropical flowering plant known as Katemfe, it is induced by attack by viroids, which are single-stranded unencapsulated RNA molecules that do not code for protein | Back alignment and domain information |
|---|
| >cd09215 Thaumatin-like the sweet-tasting protein, thaumatin, and thaumatin-like proteins involved in host defense | Back alignment and domain information |
|---|
| >cd09217 TLP-P thaumatin and allergenic/antifungal thaumatin-like proteins: plant homologs | Back alignment and domain information |
|---|
| >cd08961 GH64-TLP-SF glycoside hydrolase family 64 (beta-1,3-glucanases which produce specific pentasaccharide oligomers) and thaumatin-like proteins | Back alignment and domain information |
|---|
| >cd09216 GH64-LPHase-like glycoside hydrolase family 64: laminaripentaose-producing, beta-1,3-glucanase (LPHase)-like | Back alignment and domain information |
|---|
| >cd09220 GH64-GluB-like glycoside hydrolase family 64: beta-1,3-glucanase B (GluB)-like | Back alignment and domain information |
|---|
| >PF04681 Bys1: Blastomyces yeast-phase-specific protein; InterPro: IPR006771 The pathogenic dimorphic fungal organism Blastomyces dermatitidis exists as a budding yeast at 37 degrees C and as a mycelium at 25 degrees C | Back alignment and domain information |
|---|
| >cd09214 GH64-like glycosyl hydrolase 64 family | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 190 | ||||
| 2ahn_A | 222 | High Resolution Structure Of A Cherry Allergen Pru | 4e-53 | ||
| 3zs3_A | 222 | High Resolution Structure Of Mal D 2, The Thaumatin | 2e-49 | ||
| 1du5_A | 206 | The Crystal Structure Of Zeamatin. Length = 206 | 6e-45 | ||
| 1z3q_A | 200 | Resolution Of The Structure Of The Allergenic And A | 3e-40 | ||
| 2i0w_A | 207 | Crystal Structure Analysis Of Np24-I, A Thaumatin-L | 3e-40 | ||
| 4h8t_A | 198 | Structure Of Haze Forming Proteins In White Wines: | 9e-40 | ||
| 1pcv_A | 205 | Crystal Structure Of Osmotin, A Plant Antifungal Pr | 2e-39 | ||
| 1aun_A | 208 | Pathogenesis-Related Protein 5d From Nicotiana Taba | 1e-35 | ||
| 1kwn_A | 207 | 1.2 A Structure Of Thaumatin Crystallized In Gel Le | 7e-35 | ||
| 2blr_A | 206 | Thaumatin Before A High Dose X-Ray "burn" Length = | 7e-35 | ||
| 3aok_A | 207 | Crystal Structure Of Sweet-Tasting Protein Thaumati | 8e-35 | ||
| 1thv_A | 207 | The Structures Of Three Crystal Forms Of The Sweet | 8e-35 | ||
| 1rqw_A | 207 | Thaumatin Structure At 1.05 A Resolution Length = 2 | 9e-35 | ||
| 2d8o_A | 207 | Structure Of Vil-Thaumatin Length = 207 | 3e-34 | ||
| 2d8p_A | 207 | Structure Of Hyper-Vil-Thaumatin Length = 207 | 8e-34 | ||
| 3g7m_A | 151 | Structure Of The Thaumatin-Like Xylanase Inhibitor | 1e-10 |
| >pdb|2AHN|A Chain A, High Resolution Structure Of A Cherry Allergen Pru Av 2 Length = 222 | Back alignment and structure |
|
| >pdb|3ZS3|A Chain A, High Resolution Structure Of Mal D 2, The Thaumatin Like Food Allergen From Apple Length = 222 | Back alignment and structure |
| >pdb|1DU5|A Chain A, The Crystal Structure Of Zeamatin. Length = 206 | Back alignment and structure |
| >pdb|1Z3Q|A Chain A, Resolution Of The Structure Of The Allergenic And Antifungal Banana Fruit Thaumatin-Like Protein At 1.7a Length = 200 | Back alignment and structure |
| >pdb|2I0W|A Chain A, Crystal Structure Analysis Of Np24-I, A Thaumatin-Like Protein Length = 207 | Back alignment and structure |
| >pdb|4H8T|A Chain A, Structure Of Haze Forming Proteins In White Wines: Vitis Vinifera Thaumatin-Like Proteins Length = 198 | Back alignment and structure |
| >pdb|1PCV|A Chain A, Crystal Structure Of Osmotin, A Plant Antifungal Protein Length = 205 | Back alignment and structure |
| >pdb|1AUN|A Chain A, Pathogenesis-Related Protein 5d From Nicotiana Tabacum Length = 208 | Back alignment and structure |
| >pdb|1KWN|A Chain A, 1.2 A Structure Of Thaumatin Crystallized In Gel Length = 207 | Back alignment and structure |
| >pdb|2BLR|A Chain A, Thaumatin Before A High Dose X-Ray "burn" Length = 206 | Back alignment and structure |
| >pdb|3AOK|A Chain A, Crystal Structure Of Sweet-Tasting Protein Thaumatin Ii Length = 207 | Back alignment and structure |
| >pdb|1THV|A Chain A, The Structures Of Three Crystal Forms Of The Sweet Protein Thaumatin Length = 207 | Back alignment and structure |
| >pdb|1RQW|A Chain A, Thaumatin Structure At 1.05 A Resolution Length = 207 | Back alignment and structure |
| >pdb|2D8O|A Chain A, Structure Of Vil-Thaumatin Length = 207 | Back alignment and structure |
| >pdb|2D8P|A Chain A, Structure Of Hyper-Vil-Thaumatin Length = 207 | Back alignment and structure |
| >pdb|3G7M|A Chain A, Structure Of The Thaumatin-Like Xylanase Inhibitor Tlxi Length = 151 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 190 | |||
| 2ahn_A | 222 | Thaumatin-like protein; allergen; 1.30A {Prunus av | 6e-59 | |
| 1du5_A | 206 | Zeamatin; beta sandwich, antifungal protein; 2.50A | 1e-52 | |
| 2vhk_A | 206 | Thaumatin-I; kinetics of crystallization, chiralit | 4e-47 | |
| 1z3q_A | 200 | Thaumatin-like protein; beta sandwich, antifungal | 8e-44 | |
| 1aun_A | 208 | PR-5D; antifungal protein, pathogenesis-related pr | 3e-43 | |
| 3g7m_A | 151 | Xylanase inhibitor TL-XI; beta-sheets, xylan degra | 1e-27 |
| >2ahn_A Thaumatin-like protein; allergen; 1.30A {Prunus avium} Length = 222 | Back alignment and structure |
|---|
Score = 183 bits (464), Expect = 6e-59
Identities = 102/194 (52%), Positives = 131/194 (67%), Gaps = 5/194 (2%)
Query: 2 NGGVRLNAGENIKIEAPKGWSGRFWPRTGCTFDQSGNGKCVTGDCGA-KLNCNGAGGEPP 60
G L + + +++ P W+GRFW RTGC+ D SG C T DC + ++ CNG G PP
Sbjct: 28 TTGFELASQASFQLDTPVPWNGRFWARTGCSTDASGKFVCATADCASGQVMCNGNGAIPP 87
Query: 61 VSLAEFTLDSP--EDFYDVSLVDGYNVPMSIIPSGGTGGCKSVNCVSDLNTKCPEDLQQK 118
+LAEF + + +DFYDVSLVDG+N+PMS+ P GGTG CK+ +C +++N CP +LQ+K
Sbjct: 88 ATLAEFNIPAGGGQDFYDVSLVDGFNLPMSVTPQGGTGDCKTASCPANVNAVCPSELQKK 147
Query: 119 D-TGRVVACKSACMAFNTPEYCCTGAFGGPNTCKPTNYSKIFKESCPDAYSYAYDDLTST 177
G VVAC SAC+ F TP+YCCT P TC PTNYS+IF +CPDAYSYAYDD T
Sbjct: 148 GSDGSVVACLSACVKFGTPQYCCTPPQNTPETCPPTNYSEIFHNACPDAYSYAYDDKRGT 207
Query: 178 FTCKDA-NYTISFC 190
FTC NY I+FC
Sbjct: 208 FTCNGGPNYAITFC 221
|
| >1du5_A Zeamatin; beta sandwich, antifungal protein; 2.50A {Zea mays} SCOP: b.25.1.1 Length = 206 | Back alignment and structure |
|---|
| >2vhk_A Thaumatin-I; kinetics of crystallization, chirality, temperature, microbatch, plant protein, sweet protein; HET: TLA; 0.94A {Thaumatococcus daniellii} PDB: 2blu_A* 2blr_A* 2wbz_A 3n02_A* 3n03_A* 2vhr_A* 1lr2_A* 1lr3_A* 1lxz_A* 1ly0_A* 1pp3_A 1thi_A 2oqn_A* 1kwn_A* 2vi1_A 2vi2_A* 2vi3_A* 2vi4_A* 2vu6_A 2vu7_A* ... Length = 206 | Back alignment and structure |
|---|
| >1z3q_A Thaumatin-like protein; beta sandwich, antifungal protein; 1.70A {Musa acuminata} Length = 200 | Back alignment and structure |
|---|
| >1aun_A PR-5D; antifungal protein, pathogenesis-related protein, osmotin, thaumatin-like protein; 1.80A {Nicotiana tabacum} SCOP: b.25.1.1 PDB: 2i0w_A 1pcv_A Length = 208 | Back alignment and structure |
|---|
| >3g7m_A Xylanase inhibitor TL-XI; beta-sheets, xylan degradation, hydrolase inhibitor; HET: GOL; 2.91A {Triticum aestivum} Length = 151 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 190 | |||
| 2ahn_A | 222 | Thaumatin-like protein; allergen; 1.30A {Prunus av | 100.0 | |
| 1du5_A | 206 | Zeamatin; beta sandwich, antifungal protein; 2.50A | 100.0 | |
| 1z3q_A | 200 | Thaumatin-like protein; beta sandwich, antifungal | 100.0 | |
| 1aun_A | 208 | PR-5D; antifungal protein, pathogenesis-related pr | 100.0 | |
| 2vhk_A | 206 | Thaumatin-I; kinetics of crystallization, chiralit | 100.0 | |
| 3g7m_A | 151 | Xylanase inhibitor TL-XI; beta-sheets, xylan degra | 100.0 | |
| 3gd0_A | 367 | Laminaripentaose-producing beta-1,3-guluase (lphas | 93.57 |
| >2ahn_A Thaumatin-like protein; allergen; 1.30A {Prunus avium} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-81 Score=522.52 Aligned_cols=189 Identities=54% Similarity=1.138 Sum_probs=182.6
Q ss_pred CCCeEeCCCCeEEEecCCCceeeeeeccCCCCCCCCCccccccCCC-CcccCCCCCCCCCcceeEEeeCCC--Ccccccc
Q 029619 2 NGGVRLNAGENIKIEAPKGWSGRFWPRTGCTFDQSGNGKCVTGDCG-AKLNCNGAGGEPPVSLAEFTLDSP--EDFYDVS 78 (190)
Q Consensus 2 ~~G~~L~pg~s~~~~vp~~WsGriWaRtgCs~~~~g~~~C~TGdC~-g~~~C~~~~~~~p~TlaEftl~~~--~d~YdvS 78 (190)
++||+|+|||+++|.||.+|+|||||||+|++++.|+++|+||||+ |.|+|++.+++||+|||||+|++. +||||||
T Consensus 28 ~gG~~L~~G~s~s~~~p~~WsGRiWgRTgC~~d~~g~~~C~TGdCgsg~l~C~g~~g~pPaTLaEftl~~~~~~dfYDVS 107 (222)
T 2ahn_A 28 TTGFELASQASFQLDTPVPWNGRFWARTGCSTDASGKFVCATADCASGQVMCNGNGAIPPATLAEFNIPAGGGQDFYDVS 107 (222)
T ss_dssp CSBCCBCTTCEEEEECCSSEEEEEEEEEEEEECTTSCEEEEESCCCSSSSSCTTCCCCSSCCEEEEEECSTTCEEEEEEE
T ss_pred CCcEEcCCCCEEEEecCCCcceeEEeccccCCCCCCCcccccCCccCCceecCCCCCCCCceeeeEEecCCCCCceeeee
Confidence 5799999999999999999999999999999999999999999999 999999888899999999999875 8999999
Q ss_pred ccccccCceeEeecCCCCCCccccccccCccCCCCCccccc-cCceeccchhhhhcCCCccccCCCCCCCCCCCCCcchh
Q 029619 79 LVDGYNVPMSIIPSGGTGGCKSVNCVSDLNTKCPEDLQQKD-TGRVVACKSACMAFNTPEYCCTGAFGGPNTCKPTNYSK 157 (190)
Q Consensus 79 lVdG~NlP~~i~p~~g~~~C~~~~C~~dl~~~CP~~l~~~~-~g~~v~C~SaC~~~~~~~~CC~g~~~~~~~C~pt~ys~ 157 (190)
|||||||||+|+|+++.+.|+.++|.+|||..||.|||+++ +|++|||||||++|++|||||+|+|.+|++|+|++||+
T Consensus 108 lVDGfNlPm~i~P~~g~~~C~~~~C~~dln~~CP~eL~v~~~~G~~v~C~saC~af~~~~yCC~g~~~~p~~C~pt~ys~ 187 (222)
T 2ahn_A 108 LVDGFNLPMSVTPQGGTGDCKTASCPANVNAVCPSELQKKGSDGSVVACLSACVKFGTPQYCCTPPQNTPETCPPTNYSE 187 (222)
T ss_dssp CTTCBSSCEEEEEESCBSCCCCEEECSCGGGGCCGGGEEECTTSCEEEECCHHHHHCCHHHHCCTTSCSTTTSCCCHHHH
T ss_pred cccccccceEEEecCCCCCcccCcccCchhhhCCHHHeeecCCCcEecccccccccCCCccccCCCCCCCCCCCcchHHH
Confidence 99999999999999866789999999999999999999987 78999999999999999999999999999999999999
Q ss_pred HHhhcCCCccccccCCCCCceee-cCCCeEEEeC
Q 029619 158 IFKESCPDAYSYAYDDLTSTFTC-KDANYTISFC 190 (190)
Q Consensus 158 ~fK~~CP~AYsy~~Dd~ts~ftC-~~~~y~vtFC 190 (190)
+||++||+||+|||||++|+|+| ++++|+||||
T Consensus 188 ~FK~~CP~AYsYa~DD~tstftC~~~~~y~itFC 221 (222)
T 2ahn_A 188 IFHNACPDAYSYAYDDKRGTFTCNGGPNYAITFC 221 (222)
T ss_dssp HHHHHCTTSBCSTTCTTTTCSEEESCCEEEEEEC
T ss_pred HHhhcCcccccCCCCCCCcCeEcCCCCCEEEEeC
Confidence 99999999999999999999999 6779999999
|
| >1du5_A Zeamatin; beta sandwich, antifungal protein; 2.50A {Zea mays} SCOP: b.25.1.1 | Back alignment and structure |
|---|
| >1z3q_A Thaumatin-like protein; beta sandwich, antifungal protein; 1.70A {Musa acuminata} | Back alignment and structure |
|---|
| >1aun_A PR-5D; antifungal protein, pathogenesis-related protein, osmotin, thaumatin-like protein; 1.80A {Nicotiana tabacum} SCOP: b.25.1.1 PDB: 2i0w_A 1pcv_A | Back alignment and structure |
|---|
| >2vhk_A Thaumatin-I; kinetics of crystallization, chirality, temperature, microbatch, plant protein, sweet protein; HET: TLA; 0.94A {Thaumatococcus daniellii} PDB: 2blu_A* 2blr_A* 2wbz_A 3n02_A* 3n03_A* 2vhr_A* 1lr2_A* 1lr3_A* 1lxz_A* 1ly0_A* 1pp3_A 1thi_A 2oqn_A* 1kwn_A* 2vi1_A 2vi2_A* 2vi3_A* 2vi4_A* 2vu6_A 2vu7_A* ... | Back alignment and structure |
|---|
| >3g7m_A Xylanase inhibitor TL-XI; beta-sheets, xylan degradation, hydrolase inhibitor; HET: GOL; 2.91A {Triticum aestivum} | Back alignment and structure |
|---|
| >3gd0_A Laminaripentaose-producing beta-1,3-guluase (lphase); glycoside hydrolase, 3- glucnase; 1.62A {Streptomyces matensis} PDB: 3gd9_A* | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 190 | ||||
| d1du5a_ | 206 | b.25.1.1 (A:) Zeamatin {Maize (Zea mays) [TaxId: 4 | 1e-68 | |
| d1auna_ | 208 | b.25.1.1 (A:) Pathogenesis-related protein 5d {Com | 2e-64 | |
| d1rqwa_ | 207 | b.25.1.1 (A:) Thaumatin {Ketemfe (Thaumatococcus d | 7e-63 |
| >d1du5a_ b.25.1.1 (A:) Zeamatin {Maize (Zea mays) [TaxId: 4577]} Length = 206 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Osmotin, thaumatin-like protein superfamily: Osmotin, thaumatin-like protein family: Osmotin, thaumatin-like protein domain: Zeamatin species: Maize (Zea mays) [TaxId: 4577]
Score = 206 bits (524), Expect = 1e-68
Identities = 96/193 (49%), Positives = 117/193 (60%), Gaps = 12/193 (6%)
Query: 2 NGGVRLNAGENIKIEAPKG-WSGRFWPRTGCTFDQSGNGKCVTGDCGAKLNCNGAGGEPP 60
GG +LN GE+ +I AP G + R W RTGC FD SG G C TGDCG L C G G P
Sbjct: 21 GGGRQLNRGESWRITAPAGTTAARIWARTGCKFDASGRGSCRTGDCGGVLQCTGYG-RAP 79
Query: 61 VSLAEFTLDSPE--DFYDVSLVDGYNVPMSIIPSGGTGGCKSVNCVSDLNTKCPEDLQQK 118
+LAE+ L DF+D+SL+DG+NVPMS +P GG+G + C D+N +CP +L+Q
Sbjct: 80 NTLAEYALKQFNNLDFFDISLIDGFNVPMSFLPDGGSGCSRGPRCAVDVNARCPAELRQD 139
Query: 119 DTGRVVACKSACMAFNTPEYCCTGAFGGPNTCKPTNYSKIFKESCPDAYSYAYDDLTSTF 178
C +AC F EYCC G+ N C PTNYS+ FK CPDAYSY DD TSTF
Sbjct: 140 -----GVCNNACPVFKKDEYCCVGS--AANDCHPTNYSRYFKGQCPDAYSYPKDDATSTF 192
Query: 179 TCKD-ANYTISFC 190
TC NY + FC
Sbjct: 193 TCPAGTNYKVVFC 205
|
| >d1auna_ b.25.1.1 (A:) Pathogenesis-related protein 5d {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Length = 208 | Back information, alignment and structure |
|---|
| >d1rqwa_ b.25.1.1 (A:) Thaumatin {Ketemfe (Thaumatococcus daniellii) [TaxId: 4621]} Length = 207 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 190 | |||
| d1auna_ | 208 | Pathogenesis-related protein 5d {Common tobacco (N | 100.0 | |
| d1du5a_ | 206 | Zeamatin {Maize (Zea mays) [TaxId: 4577]} | 100.0 | |
| d1rqwa_ | 207 | Thaumatin {Ketemfe (Thaumatococcus daniellii) [Tax | 100.0 |
| >d1auna_ b.25.1.1 (A:) Pathogenesis-related protein 5d {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Osmotin, thaumatin-like protein superfamily: Osmotin, thaumatin-like protein family: Osmotin, thaumatin-like protein domain: Pathogenesis-related protein 5d species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=100.00 E-value=2.1e-72 Score=465.64 Aligned_cols=178 Identities=47% Similarity=1.016 Sum_probs=167.9
Q ss_pred CCCeEeCCCCeEEEecCCCc-eeeeeeccCCCCCCCCCccccccCCCCcccCCCCCCCCCcceeEEeeCCC--Ccccccc
Q 029619 2 NGGVRLNAGENIKIEAPKGW-SGRFWPRTGCTFDQSGNGKCVTGDCGAKLNCNGAGGEPPVSLAEFTLDSP--EDFYDVS 78 (190)
Q Consensus 2 ~~G~~L~pg~s~~~~vp~~W-sGriWaRtgCs~~~~g~~~C~TGdC~g~~~C~~~~~~~p~TlaEftl~~~--~d~YdvS 78 (190)
++||+|+||++++|.+|.+| +|||||||+|++|+.|+++|+||||+|.|+|++. ++||+|||||+|+.. +||||||
T Consensus 22 ~gg~~L~~g~s~~~~~p~~~~~gRiW~RTgC~~d~~G~~~C~TGdCgg~l~C~~~-G~pP~TlaEftl~~~~~~DfYDvS 100 (208)
T d1auna_ 22 GGGRRLERGQSWWFWAPPGTKMARIWGRTNCNFDGAGRGWCQTGDCGGVLECKGW-GKPPNTLAEYALNQFSNLDFWDIS 100 (208)
T ss_dssp TEEEEECTTCEEEEECCTTCCSEEEEEEEEEEECTTSBEEEEESCCTTBSSCSSC-CCSSCCEEEEEEEEGGGEEEEEEE
T ss_pred CCCcccCCCCceEEECCCCCcccceeecCCCCcCCCCccceeccCcCCeEecCCC-CCCCcceEEEEeccCCCcceeccc
Confidence 57999999999999999998 5999999999999999999999999999999986 579999999999864 8999999
Q ss_pred ccccccCceeEeecC-CCCCCccccccccCccCCCCCccccccCceeccchhhhhcCCCccccCCCCCCCCCCCCCcchh
Q 029619 79 LVDGYNVPMSIIPSG-GTGGCKSVNCVSDLNTKCPEDLQQKDTGRVVACKSACMAFNTPEYCCTGAFGGPNTCKPTNYSK 157 (190)
Q Consensus 79 lVdG~NlP~~i~p~~-g~~~C~~~~C~~dl~~~CP~~l~~~~~g~~v~C~SaC~~~~~~~~CC~g~~~~~~~C~pt~ys~ 157 (190)
|||||||||+|+|+. ++..|+..+|.+|||..||.||||+. ||+|||.+|++|||||+ +++|+|++||+
T Consensus 101 lVDGfNlP~~i~P~~~~~~~C~~~~C~~dln~~CP~~L~v~~-----~C~saC~~~~~~~~CCt-----~~~C~pt~ys~ 170 (208)
T d1auna_ 101 VIDGFNIPMSFGPTKPGPGKCHGIQCTANINGECPGSLRVPG-----GCNNPCTTFGGQQYCCT-----QGPCGPTELSR 170 (208)
T ss_dssp CTTCBSSCEEEEESSCCSTTCSCEEECSCHHHHCCTTTEETT-----EECCHHHHTCSHHHHCT-----TSCCCCCHHHH
T ss_pred cccccccceEEeccCCCCCCcCcccccCCccccCCHhhccCC-----CCccceeecCCCccccC-----CCcCCCchHHH
Confidence 999999999999986 45689999999999999999999977 89999999999999997 46899999999
Q ss_pred HHhhcCCCccccccCCCCCceee-cC-CCeEEEeC
Q 029619 158 IFKESCPDAYSYAYDDLTSTFTC-KD-ANYTISFC 190 (190)
Q Consensus 158 ~fK~~CP~AYsy~~Dd~ts~ftC-~~-~~y~vtFC 190 (190)
+||++||+||||||||++|+|+| ++ ++|+||||
T Consensus 171 ~FK~~CP~AYsYa~Dd~sstftC~~g~~~Y~VtFC 205 (208)
T d1auna_ 171 WFKQRCPDAYSYPQDDPTSTFTCTSWTTDYKVMFC 205 (208)
T ss_dssp HHHHHCTTSBCSTTCCTTTCEEEETTSCCEEEEES
T ss_pred HHHhhCCcccccCcCCCCcceEcCCCCCCEEEEeC
Confidence 99999999999999999999999 54 89999999
|
| >d1du5a_ b.25.1.1 (A:) Zeamatin {Maize (Zea mays) [TaxId: 4577]} | Back information, alignment and structure |
|---|
| >d1rqwa_ b.25.1.1 (A:) Thaumatin {Ketemfe (Thaumatococcus daniellii) [TaxId: 4621]} | Back information, alignment and structure |
|---|