Citrus Sinensis ID: 029619


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190
MNGGVRLNAGENIKIEAPKGWSGRFWPRTGCTFDQSGNGKCVTGDCGAKLNCNGAGGEPPVSLAEFTLDSPEDFYDVSLVDGYNVPMSIIPSGGTGGCKSVNCVSDLNTKCPEDLQQKDTGRVVACKSACMAFNTPEYCCTGAFGGPNTCKPTNYSKIFKESCPDAYSYAYDDLTSTFTCKDANYTISFC
cccccccccccEEEEEccccccEEEEccccccccccccccEEEcccccEEEEcccccccccEEEEEEEcccccEEEEEccccccccEEEEEcccccccccccccccccccccccccccccccEEEccccccccccccEEEcccccccccccccHHHHHHHHcccccEEEcccccccEEEEccccEEEEEc
ccccEEcccccEEEEEccccccEEEEEEccEEEccccEEEEcccccccEccccccccccccEEEEEEEccccEEEEEEccccEcccEEEEEccccccccccEEcccccccccHHHEEcccccEEEEccHHHHHccccccccccccccHHccccHHHHHHHHHccccEcccccHHHHcEEcccccEEEEEc
mnggvrlnagenikieapkgwsgrfwprtgctfdqsgngkcvtgdcgaklncngaggeppvslaeftldspedfydvslvdgynvpmsiipsggtggcksvncvsdlntkcpedlqqkdtgrVVACKSacmafntpeycctgafggpntckptnyskifkescpdaysyayddltstftckdanytisfc
mnggvrlnagenikieapkgwsgrfwPRTGCTFDQSGNGKCVTGDCGAKLNCNGAGGEPPVSLAEFTLDSPEDFYDVSLVDGYNVPMSIIPSGGTGGCKSVNCVSDLNTKCPEDLQQKDTGRVVACKSACMAFNTPEYCCTGAFGGPNTCKPTNYSKIFKESCPDAYSYAYDDLTSTFTCKDANYTISFC
MNGGVRLNAGENIKIEAPKGWSGRFWPRTGCTFDQSGNGKCVTGDCGAKLNCNGAGGEPPVSLAEFTLDSPEDFYDVSLVDGYNVPMSIIPSGGTGGCKSVNCVSDLNTKCPEDLQQKDTGRVVACKSACMAFNTPEYCCTGAFGGPNTCKPTNYSKIFKESCPDAYSYAYDDLTSTFTCKDANYTISFC
************IKIEAPKGWSGRFWPRTGCTFDQSGNGKCVTGDCGAKLNCNGAGGEPPVSLAEFTLDSPEDFYDVSLVDGYNVPMSIIPSGGTGGCKSVNCVSDLNTKCPEDLQQKDTGRVVACKSACMAFNTPEYCCTGAFGGPNTCKPTNYSKIFKESCPDAYSYAYDDLTSTFTCKDANYTIS**
MNGGVRLNAGENIKIEAPKGWSGRFWPRTGCTFDQSGNGKCVTGDCGAKLNCNGAGGEPPVSLAEFTLDSPEDFYDVSLVDGYNVPMSIIPSGGTGGCKSVNCVSDLNTKCPEDLQQKDTGRVVACKSACMAFNTPEYCCTGAFGGPNTCKPTNYSKIFKESCPDAYSYAYDDLTSTFTCKDANYTISFC
MNGGVRLNAGENIKIEAPKGWSGRFWPRTGCTFDQSGNGKCVTGDCGAKLNCNGAGGEPPVSLAEFTLDSPEDFYDVSLVDGYNVPMSIIPSGGTGGCKSVNCVSDLNTKCPEDLQQKDTGRVVACKSACMAFNTPEYCCTGAFGGPNTCKPTNYSKIFKESCPDAYSYAYDDLTSTFTCKDANYTISFC
**GGVRLNAGENIKIEAPKGWSGRFWPRTGCTFDQSGNGKCVTGDCGAKLNCNGAGGEPPVSLAEFTLDSPEDFYDVSLVDGYNVPMSIIPSGGTGGCKSVNCVSDLNTKCPEDLQQKDTGRVVACKSACMAFNTPEYCCTGAFGGPNTCKPTNYSKIFKESCPDAYSYAYDDLTSTFTCKDANYTISFC
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MNGGVRLNAGENIKIEAPKGWSGRFWPRTGCTFDQSGNGKCVTGDCGAKLNCNGAGGEPPVSLAEFTLDSPEDFYDVSLVDGYNVPMSIIPSGGTGGCKSVNCVSDLNTKCPEDLQQKDTGRVVACKSACMAFNTPEYCCTGAFGGPNTCKPTNYSKIFKESCPDAYSYAYDDLTSTFTCKDANYTISFC
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query190 2.2.26 [Sep-21-2011]
P50699243 Thaumatin-like protein OS no no 0.989 0.773 0.631 2e-65
P28493239 Pathogenesis-related prot no no 0.984 0.782 0.659 1e-64
O80327244 Thaumatin-like protein 1 N/A no 1.0 0.778 0.533 1e-55
P50694245 Glucan endo-1,3-beta-gluc N/A no 0.984 0.763 0.531 2e-52
P83332246 Thaumatin-like protein 1 N/A no 0.984 0.760 0.541 8e-52
Q53MB8253 Thaumatin-like protein OS no no 0.994 0.747 0.512 2e-49
Q9FSG7246 Thaumatin-like protein 1a N/A no 0.984 0.760 0.510 1e-48
Q9SMH2243 Thaumatin-like protein 1 N/A no 0.989 0.773 0.520 1e-48
P83336212 Thaumatin-like protein 1b N/A no 0.973 0.872 0.510 2e-48
P83335242 Thaumatin-like protein 2 N/A no 0.984 0.772 0.515 3e-48
>sp|P50699|TLPH_ARATH Thaumatin-like protein OS=Arabidopsis thaliana GN=At1g18250 PE=2 SV=2 Back     alignment and function desciption
 Score =  248 bits (633), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 120/190 (63%), Positives = 138/190 (72%), Gaps = 2/190 (1%)

Query: 3   GGVRLNAGENIKIEAPKGWSGRFWPRTGCTFDQSGNGKCVTGDCGAKLNCNGAGGEPPVS 62
           GG +L A +   ++ P  WSGRFW R GCTFD+SG G C TGDCG  L+CNGAGGEPP +
Sbjct: 49  GGFKLPANKAHSLQLPPLWSGRFWGRHGCTFDRSGRGHCATGDCGGSLSCNGAGGEPPAT 108

Query: 63  LAEFTLDSPEDFYDVSLVDGYNVPMSIIPSGGTGGCKSVNCVSDLNTKCPEDLQ--QKDT 120
           LAE TL    DFYDVSLVDGYN+ MSI+P  G+G C    CVSDLN  CP  LQ   ++ 
Sbjct: 109 LAEITLGPELDFYDVSLVDGYNLAMSIMPVKGSGQCSYAGCVSDLNQMCPVGLQVRSRNG 168

Query: 121 GRVVACKSACMAFNTPEYCCTGAFGGPNTCKPTNYSKIFKESCPDAYSYAYDDLTSTFTC 180
            RVVACKSAC AFN+P+YCCTG FG P +CKPT YSKIFK +CP AYSYAYDD TS  TC
Sbjct: 169 KRVVACKSACSAFNSPQYCCTGLFGNPQSCKPTAYSKIFKVACPKAYSYAYDDPTSIATC 228

Query: 181 KDANYTISFC 190
             ANY ++FC
Sbjct: 229 SKANYIVTFC 238





Arabidopsis thaliana (taxid: 3702)
>sp|P28493|PR5_ARATH Pathogenesis-related protein 5 OS=Arabidopsis thaliana GN=At1g75040 PE=1 SV=1 Back     alignment and function description
>sp|O80327|TLP1_PYRPY Thaumatin-like protein 1 OS=Pyrus pyrifolia GN=TL1 PE=1 SV=1 Back     alignment and function description
>sp|P50694|TLP_PRUAV Glucan endo-1,3-beta-glucosidase OS=Prunus avium PE=1 SV=1 Back     alignment and function description
>sp|P83332|TLP1_PRUPE Thaumatin-like protein 1 OS=Prunus persica PE=2 SV=1 Back     alignment and function description
>sp|Q53MB8|TLPH_ORYSJ Thaumatin-like protein OS=Oryza sativa subsp. japonica GN=Os11g0706600 PE=2 SV=1 Back     alignment and function description
>sp|Q9FSG7|TP1A_MALDO Thaumatin-like protein 1a OS=Malus domestica GN=TL1 PE=1 SV=1 Back     alignment and function description
>sp|Q9SMH2|TLP1_CASSA Thaumatin-like protein 1 OS=Castanea sativa GN=TL1 PE=2 SV=1 Back     alignment and function description
>sp|P83336|TP1B_MALDO Thaumatin-like protein 1b (Fragment) OS=Malus domestica PE=2 SV=1 Back     alignment and function description
>sp|P83335|TLP2_PRUPE Thaumatin-like protein 2 OS=Prunus persica PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query190
147844086 634 hypothetical protein VITISV_043971 [Viti 1.0 0.299 0.715 3e-77
225450195233 PREDICTED: thaumatin-like protein-like, 1.0 0.815 0.715 6e-75
4586372238 thaumatin-like protein SE39b [Nicotiana 1.0 0.798 0.675 5e-71
255544244234 Zeamatin precursor, putative [Ricinus co 0.994 0.807 0.657 5e-70
449436271234 PREDICTED: thaumatin-like protein-like [ 1.0 0.811 0.657 4e-69
356542385236 PREDICTED: thaumatin-like protein-like [ 1.0 0.805 0.643 2e-67
297844894244 hypothetical protein ARALYDRAFT_472154 [ 0.984 0.766 0.637 3e-66
60543124240 thaumatin-like protein [Cryptomeria japo 0.989 0.783 0.634 3e-65
30686314247 pathogenesis-related thaumatin-like prot 0.994 0.765 0.630 4e-65
359489343262 PREDICTED: LOW QUALITY PROTEIN: pathogen 1.0 0.725 0.663 2e-64
>gi|147844086|emb|CAN80000.1| hypothetical protein VITISV_043971 [Vitis vinifera] Back     alignment and taxonomy information
 Score =  293 bits (749), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 136/190 (71%), Positives = 152/190 (80%)

Query: 1   MNGGVRLNAGENIKIEAPKGWSGRFWPRTGCTFDQSGNGKCVTGDCGAKLNCNGAGGEPP 60
           M+GG  L  GE++ I AP+GWSGRFW R  C+FD SG G CVTGDCG  L C GAGG PP
Sbjct: 445 MDGGFELRPGESVDITAPEGWSGRFWGRRRCSFDDSGKGSCVTGDCGGVLKCAGAGGAPP 504

Query: 61  VSLAEFTLDSPEDFYDVSLVDGYNVPMSIIPSGGTGGCKSVNCVSDLNTKCPEDLQQKDT 120
            +LAEFTLDSP DFYDVSLVDGYN+P+SI+PSGG+G CK+V CVSDLN  CP+DLQ    
Sbjct: 505 ATLAEFTLDSPVDFYDVSLVDGYNMPVSILPSGGSGECKTVRCVSDLNQHCPKDLQVLRD 564

Query: 121 GRVVACKSACMAFNTPEYCCTGAFGGPNTCKPTNYSKIFKESCPDAYSYAYDDLTSTFTC 180
           GRVVAC SACMAFN PEYCC+GAF  P+TCKPT YSK+FK SCP +YSYAYDD TSTFTC
Sbjct: 565 GRVVACNSACMAFNKPEYCCSGAFSTPDTCKPTEYSKVFKASCPTSYSYAYDDPTSTFTC 624

Query: 181 KDANYTISFC 190
           K ANY I FC
Sbjct: 625 KGANYLIRFC 634




Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225450195|ref|XP_002264550.1| PREDICTED: thaumatin-like protein-like, partial [Vitis vinifera] Back     alignment and taxonomy information
>gi|4586372|dbj|BAA74546.2| thaumatin-like protein SE39b [Nicotiana tabacum] Back     alignment and taxonomy information
>gi|255544244|ref|XP_002513184.1| Zeamatin precursor, putative [Ricinus communis] gi|223547682|gb|EEF49175.1| Zeamatin precursor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|449436271|ref|XP_004135916.1| PREDICTED: thaumatin-like protein-like [Cucumis sativus] gi|449521932|ref|XP_004167983.1| PREDICTED: thaumatin-like protein-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356542385|ref|XP_003539647.1| PREDICTED: thaumatin-like protein-like [Glycine max] Back     alignment and taxonomy information
>gi|297844894|ref|XP_002890328.1| hypothetical protein ARALYDRAFT_472154 [Arabidopsis lyrata subsp. lyrata] gi|297336170|gb|EFH66587.1| hypothetical protein ARALYDRAFT_472154 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|60543124|dbj|BAD90814.1| thaumatin-like protein [Cryptomeria japonica] Back     alignment and taxonomy information
>gi|30686314|ref|NP_173365.2| pathogenesis-related thaumatin-like protein [Arabidopsis thaliana] gi|8778412|gb|AAF79420.1|AC025808_2 F18O14.4 [Arabidopsis thaliana] gi|48310686|gb|AAT41867.1| At1g19320 [Arabidopsis thaliana] gi|332191708|gb|AEE29829.1| pathogenesis-related thaumatin-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|359489343|ref|XP_003633912.1| PREDICTED: LOW QUALITY PROTEIN: pathogenesis-related protein 5-like [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query190
TAIR|locus:2016442247 AT1G19320 "AT1G19320" [Arabido 0.994 0.765 0.630 9.2e-68
TAIR|locus:2037235239 PR5 "AT1G75040" [Arabidopsis t 0.984 0.782 0.659 9.2e-68
TAIR|locus:2037227246 AT1G75050 "AT1G75050" [Arabido 0.989 0.764 0.621 1.5e-65
TAIR|locus:2194344244 ATLP-1 [Arabidopsis thaliana ( 0.989 0.770 0.631 2e-65
TAIR|locus:2027161246 TLP-3 "AT1G75030" [Arabidopsis 0.989 0.764 0.608 3.7e-64
TAIR|locus:2027864264 AT1G73620 [Arabidopsis thalian 0.989 0.712 0.615 6e-64
TAIR|locus:2203236356 AT1G77700 "AT1G77700" [Arabido 0.978 0.522 0.569 5e-60
TAIR|locus:2121189 345 AT4G38660 "AT4G38660" [Arabido 0.968 0.533 0.566 5e-60
TAIR|locus:2153929 420 AT5G24620 [Arabidopsis thalian 0.984 0.445 0.553 1.7e-59
TAIR|locus:2198641316 AT1G20030 "AT1G20030" [Arabido 0.984 0.591 0.581 4.5e-59
TAIR|locus:2016442 AT1G19320 "AT1G19320" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 688 (247.2 bits), Expect = 9.2e-68, P = 9.2e-68
 Identities = 123/195 (63%), Positives = 142/195 (72%)

Query:     2 NGGVRLNAGENIKIEAPKGWSGRFWPRTGCTFDQSGNGKCVTGDCGAKLNCNGAGGEPPV 61
             +GG  L +G ++      GWSGRFW RT C FD SG+GKC TGDCG+KL C GAGG PP 
Sbjct:    52 DGGFALASGSSVTFTVSPGWSGRFWARTYCNFDASGSGKCGTGDCGSKLKCAGAGGAPPA 111

Query:    62 SLAEFTLDSP------EDFYDVSLVDGYNVPMSIIPSGGTGGCKSVNCVSDLNTKCPEDL 115
             +LAEFT+ S       +DFYDVSLVDGYNV M I P GG+G CK+  CVSD+N  CP++L
Sbjct:   112 TLAEFTIGSSGKKNAVQDFYDVSLVDGYNVQMKITPQGGSGDCKTAGCVSDVNAICPKEL 171

Query:   116 QQKDTGRVVACKSACMAFNTPEYCCTGAFGGPNTCKPTNYSKIFKESCPDAYSYAYDDLT 175
             Q      V ACKSAC AFN PEYCCTGA+  P TC PTNYSKIFK++CP AYSYAYDD +
Sbjct:   172 QVTGPSGVAACKSACEAFNKPEYCCTGAYSTPATCPPTNYSKIFKQACPSAYSYAYDDAS 231

Query:   176 STFTCKDANYTISFC 190
             STFTC +ANY ISFC
Sbjct:   232 STFTCTNANYEISFC 246




GO:0003674 "molecular_function" evidence=ND
GO:0005576 "extracellular region" evidence=ISM
GO:0051707 "response to other organism" evidence=ISS
TAIR|locus:2037235 PR5 "AT1G75040" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2037227 AT1G75050 "AT1G75050" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2194344 ATLP-1 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2027161 TLP-3 "AT1G75030" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2027864 AT1G73620 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2203236 AT1G77700 "AT1G77700" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2121189 AT4G38660 "AT4G38660" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2153929 AT5G24620 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2198641 AT1G20030 "AT1G20030" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P83336TP1B_MALDONo assigned EC number0.51050.97360.8726N/Ano

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query190
cd09218219 cd09218, TLP-PA, allergenic/antifungal thaumatin-l 1e-105
pfam00314212 pfam00314, Thaumatin, Thaumatin family 1e-101
smart00205218 smart00205, THN, Thaumatin family 1e-87
cd09219229 cd09219, TLP-F, thaumatin-like proteins: basidiomy 7e-34
cd09217151 cd09217, TLP-P, thaumatin and allergenic/antifunga 9e-32
cd09215157 cd09215, Thaumatin-like, the sweet-tasting protein 8e-31
cd08961153 cd08961, GH64-TLP-SF, glycoside hydrolase family 6 8e-29
>gnl|CDD|185757 cd09218, TLP-PA, allergenic/antifungal thaumatin-like proteins: plant and animal homologs Back     alignment and domain information
 Score =  301 bits (772), Expect = e-105
 Identities = 127/193 (65%), Positives = 148/193 (76%), Gaps = 4/193 (2%)

Query: 2   NGGVRLNAGENIKIEAPKGWSGRFWPRTGCTFDQSGNGKCVTGDCGAKLNCNGAGGEPPV 61
            GG  L  G++  I+AP GWSGRFW RTGC+FD SG G C TGDCG  L CNGAGG PP 
Sbjct: 27  GGGFELAPGQSRTIDAPSGWSGRFWGRTGCSFDSSGKGSCATGDCGGGLECNGAGGAPPA 86

Query: 62  SLAEFTL--DSPEDFYDVSLVDGYNVPMSIIPSGGTGGCKSVNCVSDLNTKCPEDLQQKD 119
           +LAEFTL     +DFYDVSLVDGYN+P+SI P GG+GGC++  CV+DLN  CP +LQ K+
Sbjct: 87  TLAEFTLGGSGGQDFYDVSLVDGYNLPVSITPQGGSGGCRTAGCVADLNAVCPAELQVKN 146

Query: 120 T-GRVVACKSACMAFNTPEYCCTGAFGGPNTCKPTNYSKIFKESCPDAYSYAYDDLTSTF 178
           + GRVVACKSAC+AFNT EYCC GA+G P TCKPT YS++FK +CP AYSYAYDD TSTF
Sbjct: 147 SGGRVVACKSACLAFNTDEYCCRGAYGTPETCKPTTYSRLFKNACPQAYSYAYDDPTSTF 206

Query: 179 TCKDA-NYTISFC 190
           TC    NY I+FC
Sbjct: 207 TCSSGANYVITFC 219


This subfamily is represented by the thaumatin-like proteins (TLPs), Cherry Allergen Pru Av 2 TLP, Peach PpAZ44 TLP (a propylene-induced TLP in abscission), the Caenorhabditis elegans thaumatin family member (thn-6), and other plant and animal homologs. TLPs are involved in host defense and a wide range of developmental processes in fungi, plants, and animals. Due to their inducible expression by environmental stresses such as pathogen/pest attack, drought and cold, plant TLPs are classified as the pathogenesis-related (PR) protein family 5 (PR5). Several members of the plant TLP family have been reported as food allergens from fruits (i.e., cherry, Pru av 2; bell pepper, Cap a1; tomatoes, Lyc e NP24) and pollen allergens from conifers (i.e., mountain cedar, Jun a 3; Arizona cypress, Cup a3; Japanese cedar, Cry j3). TLPs are three-domain, crescent-fold structures with either an electronegative, electropositive, or neutral cleft occurring between domains I and II. It has been proposed that the antifungal activity of plant PR5 proteins relies on the strong electronegative character of this cleft. Some TLPs hydrolyze the beta-1,3-glucans of the type commonly found in fungal walls. TLPs within this subfamily contain 16 conserved Cys residues. Length = 219

>gnl|CDD|215853 pfam00314, Thaumatin, Thaumatin family Back     alignment and domain information
>gnl|CDD|128501 smart00205, THN, Thaumatin family Back     alignment and domain information
>gnl|CDD|185758 cd09219, TLP-F, thaumatin-like proteins: basidiomycete homologs Back     alignment and domain information
>gnl|CDD|185756 cd09217, TLP-P, thaumatin and allergenic/antifungal thaumatin-like proteins: plant homologs Back     alignment and domain information
>gnl|CDD|185754 cd09215, Thaumatin-like, the sweet-tasting protein, thaumatin, and thaumatin-like proteins involved in host defense Back     alignment and domain information
>gnl|CDD|185752 cd08961, GH64-TLP-SF, glycoside hydrolase family 64 (beta-1,3-glucanases which produce specific pentasaccharide oligomers) and thaumatin-like proteins Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 190
cd09218219 TLP-PA allergenic/antifungal thaumatin-like protei 100.0
smart00205218 THN Thaumatin family. The thaumatin family gathers 100.0
cd09219229 TLP-F thaumatin-like proteins: basidiomycete homol 100.0
PF00314213 Thaumatin: Thaumatin family; InterPro: IPR001938 T 100.0
cd09215157 Thaumatin-like the sweet-tasting protein, thaumati 100.0
cd09217151 TLP-P thaumatin and allergenic/antifungal thaumati 100.0
cd08961153 GH64-TLP-SF glycoside hydrolase family 64 (beta-1, 100.0
cd09216 353 GH64-LPHase-like glycoside hydrolase family 64: la 95.13
cd09220 369 GH64-GluB-like glycoside hydrolase family 64: beta 94.7
PF04681155 Bys1: Blastomyces yeast-phase-specific protein; In 93.84
cd09214319 GH64-like glycosyl hydrolase 64 family. This famil 80.57
>cd09218 TLP-PA allergenic/antifungal thaumatin-like proteins: plant and animal homologs Back     alignment and domain information
Probab=100.00  E-value=2.5e-78  Score=507.61  Aligned_cols=189  Identities=68%  Similarity=1.368  Sum_probs=182.1

Q ss_pred             CCCeEeCCCCeEEEecCCCceeeeeeccCCCCCCCCCccccccCCCCcccCCCCCCCCCcceeEEeeCCC--Cccccccc
Q 029619            2 NGGVRLNAGENIKIEAPKGWSGRFWPRTGCTFDQSGNGKCVTGDCGAKLNCNGAGGEPPVSLAEFTLDSP--EDFYDVSL   79 (190)
Q Consensus         2 ~~G~~L~pg~s~~~~vp~~WsGriWaRtgCs~~~~g~~~C~TGdC~g~~~C~~~~~~~p~TlaEftl~~~--~d~YdvSl   79 (190)
                      ++||+|+||++++|+||+.|+|||||||+|++|+.|+++|+||||++.|+|++.+++||+|||||+|+..  +|||||||
T Consensus        27 ~gGf~L~~g~s~~~~vp~~WsGriWaRTgC~~~~~g~~~C~TGDCgg~l~C~g~~g~pP~TlaEftl~~~~~~d~YdvSl  106 (219)
T cd09218          27 GGGFELAPGQSRTIDAPSGWSGRFWGRTGCSFDSSGKGSCATGDCGGGLECNGAGGAPPATLAEFTLGGSGGQDFYDVSL  106 (219)
T ss_pred             CCCEEcCCCCeEEEeCCCCcceeeeeccCCCCCCCCccccccCCCCCeeecCCCCCCCCceeEEEEeccCCCCcceeeee
Confidence            4899999999999999999999999999999999999999999999999999888899999999999864  89999999


Q ss_pred             cccccCceeEeecCCCCCCccccccccCccCCCCCccccc-cCceeccchhhhhcCCCccccCCCCCCCCCCCCCcchhH
Q 029619           80 VDGYNVPMSIIPSGGTGGCKSVNCVSDLNTKCPEDLQQKD-TGRVVACKSACMAFNTPEYCCTGAFGGPNTCKPTNYSKI  158 (190)
Q Consensus        80 VdG~NlP~~i~p~~g~~~C~~~~C~~dl~~~CP~~l~~~~-~g~~v~C~SaC~~~~~~~~CC~g~~~~~~~C~pt~ys~~  158 (190)
                      ||||||||+|+|+++...|+..+|.+|||+.||.||||++ +|+||||||||++|++|||||+|+|.+|++|+|+.||++
T Consensus       107 VdGfNlP~~i~P~~~~~~C~~~~C~~din~~CP~~L~v~~~~g~vv~C~SaC~~f~~~~~CC~g~~~~p~~C~pt~ys~~  186 (219)
T cd09218         107 VDGYNLPVSITPQGGSGGCRTAGCVADLNAVCPAELQVKNSGGRVVACKSACLAFNTDEYCCRGAYGTPETCKPTTYSRL  186 (219)
T ss_pred             eccccCCEEEEecCCCCCCCCCcccCcccccCCHHHeeccCCCcEeeecCHHHhhCCccceecCCCCCCCcCCCcchhHH
Confidence            9999999999998766689999999999999999999997 789999999999999999999999999999999999999


Q ss_pred             HhhcCCCccccccCCCCCceee-cCCCeEEEeC
Q 029619          159 FKESCPDAYSYAYDDLTSTFTC-KDANYTISFC  190 (190)
Q Consensus       159 fK~~CP~AYsy~~Dd~ts~ftC-~~~~y~vtFC  190 (190)
                      ||++||+||+|||||++++|+| ++++|+|+||
T Consensus       187 FK~~CP~Aysya~Dd~~s~~tC~~~~~Y~I~FC  219 (219)
T cd09218         187 FKNACPQAYSYAYDDPTSTFTCSSGANYVITFC  219 (219)
T ss_pred             HHhhCccccccCCCCCCcceEcCCCCCEEEEeC
Confidence            9999999999999999999999 5799999999



This subfamily is represented by the thaumatin-like proteins (TLPs), Cherry Allergen Pru Av 2 TLP, Peach PpAZ44 TLP (a propylene-induced TLP in abscission), the Caenorhabditis elegans thaumatin family member (thn-6), and other plant and animal homologs. TLPs are involved in host defense and a wide range of developmental processes in fungi, plants, and animals. Due to their inducible expression by environmental stresses such as pathogen/pest attack, drought and cold, plant TLPs are classified as the pathogenesis-related (PR) protein family 5 (PR5). Several members of the plant TLP family have been reported as food allergens from fruits (i.e., cherry, Pru av 2; bell pepper, Cap a1; tomatoes, Lyc e NP24) and pollen allergens from conifers (i.e., mountain cedar, Jun a 3; Arizona cypress, Cup a3; Japanese cedar, Cry j3). TLPs are three-domain, crescent-fold structures with either an electronegative, ele

>smart00205 THN Thaumatin family Back     alignment and domain information
>cd09219 TLP-F thaumatin-like proteins: basidiomycete homologs Back     alignment and domain information
>PF00314 Thaumatin: Thaumatin family; InterPro: IPR001938 Thaumatin [] is an intensely sweet-tasting protein, 100 000 times sweeter than sucrose on a molar basis [] found in berries from Thaumatococcus daniellii, a tropical flowering plant known as Katemfe, it is induced by attack by viroids, which are single-stranded unencapsulated RNA molecules that do not code for protein Back     alignment and domain information
>cd09215 Thaumatin-like the sweet-tasting protein, thaumatin, and thaumatin-like proteins involved in host defense Back     alignment and domain information
>cd09217 TLP-P thaumatin and allergenic/antifungal thaumatin-like proteins: plant homologs Back     alignment and domain information
>cd08961 GH64-TLP-SF glycoside hydrolase family 64 (beta-1,3-glucanases which produce specific pentasaccharide oligomers) and thaumatin-like proteins Back     alignment and domain information
>cd09216 GH64-LPHase-like glycoside hydrolase family 64: laminaripentaose-producing, beta-1,3-glucanase (LPHase)-like Back     alignment and domain information
>cd09220 GH64-GluB-like glycoside hydrolase family 64: beta-1,3-glucanase B (GluB)-like Back     alignment and domain information
>PF04681 Bys1: Blastomyces yeast-phase-specific protein; InterPro: IPR006771 The pathogenic dimorphic fungal organism Blastomyces dermatitidis exists as a budding yeast at 37 degrees C and as a mycelium at 25 degrees C Back     alignment and domain information
>cd09214 GH64-like glycosyl hydrolase 64 family Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query190
2ahn_A222 High Resolution Structure Of A Cherry Allergen Pru 4e-53
3zs3_A222 High Resolution Structure Of Mal D 2, The Thaumatin 2e-49
1du5_A206 The Crystal Structure Of Zeamatin. Length = 206 6e-45
1z3q_A200 Resolution Of The Structure Of The Allergenic And A 3e-40
2i0w_A207 Crystal Structure Analysis Of Np24-I, A Thaumatin-L 3e-40
4h8t_A198 Structure Of Haze Forming Proteins In White Wines: 9e-40
1pcv_A205 Crystal Structure Of Osmotin, A Plant Antifungal Pr 2e-39
1aun_A208 Pathogenesis-Related Protein 5d From Nicotiana Taba 1e-35
1kwn_A207 1.2 A Structure Of Thaumatin Crystallized In Gel Le 7e-35
2blr_A206 Thaumatin Before A High Dose X-Ray "burn" Length = 7e-35
3aok_A207 Crystal Structure Of Sweet-Tasting Protein Thaumati 8e-35
1thv_A207 The Structures Of Three Crystal Forms Of The Sweet 8e-35
1rqw_A207 Thaumatin Structure At 1.05 A Resolution Length = 2 9e-35
2d8o_A207 Structure Of Vil-Thaumatin Length = 207 3e-34
2d8p_A207 Structure Of Hyper-Vil-Thaumatin Length = 207 8e-34
3g7m_A151 Structure Of The Thaumatin-Like Xylanase Inhibitor 1e-10
>pdb|2AHN|A Chain A, High Resolution Structure Of A Cherry Allergen Pru Av 2 Length = 222 Back     alignment and structure

Iteration: 1

Score = 203 bits (517), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 102/192 (53%), Positives = 132/192 (68%), Gaps = 5/192 (2%) Query: 4 GVRLNAGENIKIEAPKGWSGRFWPRTGCTFDQSGNGKCVTGDCGA-KLNCNGAGGEPPVS 62 G L + + +++ P W+GRFW RTGC+ D SG C T DC + ++ CNG G PP + Sbjct: 30 GFELASQASFQLDTPVPWNGRFWARTGCSTDASGKFVCATADCASGQVMCNGNGAIPPAT 89 Query: 63 LAEFTLDSP--EDFYDVSLVDGYNVPMSIIPSGGTGGCKSVNCVSDLNTKCPEDLQQKDT 120 LAEF + + +DFYDVSLVDG+N+PMS+ P GGTG CK+ +C +++N CP +LQ+K + Sbjct: 90 LAEFNIPAGGGQDFYDVSLVDGFNLPMSVTPQGGTGDCKTASCPANVNAVCPSELQKKGS 149 Query: 121 -GRVVACKSACMAFNTPEYCCTGAFGGPNTCKPTNYSKIFKESCPDAYSYAYDDLTSTFT 179 G VVAC SAC+ F TP+YCCT P TC PTNYS+IF +CPDAYSYAYDD TFT Sbjct: 150 DGSVVACLSACVKFGTPQYCCTPPQNTPETCPPTNYSEIFHNACPDAYSYAYDDKRGTFT 209 Query: 180 CKDA-NYTISFC 190 C NY I+FC Sbjct: 210 CNGGPNYAITFC 221
>pdb|3ZS3|A Chain A, High Resolution Structure Of Mal D 2, The Thaumatin Like Food Allergen From Apple Length = 222 Back     alignment and structure
>pdb|1DU5|A Chain A, The Crystal Structure Of Zeamatin. Length = 206 Back     alignment and structure
>pdb|1Z3Q|A Chain A, Resolution Of The Structure Of The Allergenic And Antifungal Banana Fruit Thaumatin-Like Protein At 1.7a Length = 200 Back     alignment and structure
>pdb|2I0W|A Chain A, Crystal Structure Analysis Of Np24-I, A Thaumatin-Like Protein Length = 207 Back     alignment and structure
>pdb|4H8T|A Chain A, Structure Of Haze Forming Proteins In White Wines: Vitis Vinifera Thaumatin-Like Proteins Length = 198 Back     alignment and structure
>pdb|1PCV|A Chain A, Crystal Structure Of Osmotin, A Plant Antifungal Protein Length = 205 Back     alignment and structure
>pdb|1AUN|A Chain A, Pathogenesis-Related Protein 5d From Nicotiana Tabacum Length = 208 Back     alignment and structure
>pdb|1KWN|A Chain A, 1.2 A Structure Of Thaumatin Crystallized In Gel Length = 207 Back     alignment and structure
>pdb|2BLR|A Chain A, Thaumatin Before A High Dose X-Ray "burn" Length = 206 Back     alignment and structure
>pdb|3AOK|A Chain A, Crystal Structure Of Sweet-Tasting Protein Thaumatin Ii Length = 207 Back     alignment and structure
>pdb|1THV|A Chain A, The Structures Of Three Crystal Forms Of The Sweet Protein Thaumatin Length = 207 Back     alignment and structure
>pdb|1RQW|A Chain A, Thaumatin Structure At 1.05 A Resolution Length = 207 Back     alignment and structure
>pdb|2D8O|A Chain A, Structure Of Vil-Thaumatin Length = 207 Back     alignment and structure
>pdb|2D8P|A Chain A, Structure Of Hyper-Vil-Thaumatin Length = 207 Back     alignment and structure
>pdb|3G7M|A Chain A, Structure Of The Thaumatin-Like Xylanase Inhibitor Tlxi Length = 151 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query190
2ahn_A222 Thaumatin-like protein; allergen; 1.30A {Prunus av 6e-59
1du5_A206 Zeamatin; beta sandwich, antifungal protein; 2.50A 1e-52
2vhk_A206 Thaumatin-I; kinetics of crystallization, chiralit 4e-47
1z3q_A200 Thaumatin-like protein; beta sandwich, antifungal 8e-44
1aun_A208 PR-5D; antifungal protein, pathogenesis-related pr 3e-43
3g7m_A151 Xylanase inhibitor TL-XI; beta-sheets, xylan degra 1e-27
>2ahn_A Thaumatin-like protein; allergen; 1.30A {Prunus avium} Length = 222 Back     alignment and structure
 Score =  183 bits (464), Expect = 6e-59
 Identities = 102/194 (52%), Positives = 131/194 (67%), Gaps = 5/194 (2%)

Query: 2   NGGVRLNAGENIKIEAPKGWSGRFWPRTGCTFDQSGNGKCVTGDCGA-KLNCNGAGGEPP 60
             G  L +  + +++ P  W+GRFW RTGC+ D SG   C T DC + ++ CNG G  PP
Sbjct: 28  TTGFELASQASFQLDTPVPWNGRFWARTGCSTDASGKFVCATADCASGQVMCNGNGAIPP 87

Query: 61  VSLAEFTLDSP--EDFYDVSLVDGYNVPMSIIPSGGTGGCKSVNCVSDLNTKCPEDLQQK 118
            +LAEF + +   +DFYDVSLVDG+N+PMS+ P GGTG CK+ +C +++N  CP +LQ+K
Sbjct: 88  ATLAEFNIPAGGGQDFYDVSLVDGFNLPMSVTPQGGTGDCKTASCPANVNAVCPSELQKK 147

Query: 119 D-TGRVVACKSACMAFNTPEYCCTGAFGGPNTCKPTNYSKIFKESCPDAYSYAYDDLTST 177
              G VVAC SAC+ F TP+YCCT     P TC PTNYS+IF  +CPDAYSYAYDD   T
Sbjct: 148 GSDGSVVACLSACVKFGTPQYCCTPPQNTPETCPPTNYSEIFHNACPDAYSYAYDDKRGT 207

Query: 178 FTCKDA-NYTISFC 190
           FTC    NY I+FC
Sbjct: 208 FTCNGGPNYAITFC 221


>1du5_A Zeamatin; beta sandwich, antifungal protein; 2.50A {Zea mays} SCOP: b.25.1.1 Length = 206 Back     alignment and structure
>2vhk_A Thaumatin-I; kinetics of crystallization, chirality, temperature, microbatch, plant protein, sweet protein; HET: TLA; 0.94A {Thaumatococcus daniellii} PDB: 2blu_A* 2blr_A* 2wbz_A 3n02_A* 3n03_A* 2vhr_A* 1lr2_A* 1lr3_A* 1lxz_A* 1ly0_A* 1pp3_A 1thi_A 2oqn_A* 1kwn_A* 2vi1_A 2vi2_A* 2vi3_A* 2vi4_A* 2vu6_A 2vu7_A* ... Length = 206 Back     alignment and structure
>1z3q_A Thaumatin-like protein; beta sandwich, antifungal protein; 1.70A {Musa acuminata} Length = 200 Back     alignment and structure
>1aun_A PR-5D; antifungal protein, pathogenesis-related protein, osmotin, thaumatin-like protein; 1.80A {Nicotiana tabacum} SCOP: b.25.1.1 PDB: 2i0w_A 1pcv_A Length = 208 Back     alignment and structure
>3g7m_A Xylanase inhibitor TL-XI; beta-sheets, xylan degradation, hydrolase inhibitor; HET: GOL; 2.91A {Triticum aestivum} Length = 151 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query190
2ahn_A222 Thaumatin-like protein; allergen; 1.30A {Prunus av 100.0
1du5_A206 Zeamatin; beta sandwich, antifungal protein; 2.50A 100.0
1z3q_A200 Thaumatin-like protein; beta sandwich, antifungal 100.0
1aun_A208 PR-5D; antifungal protein, pathogenesis-related pr 100.0
2vhk_A206 Thaumatin-I; kinetics of crystallization, chiralit 100.0
3g7m_A151 Xylanase inhibitor TL-XI; beta-sheets, xylan degra 100.0
3gd0_A 367 Laminaripentaose-producing beta-1,3-guluase (lphas 93.57
>2ahn_A Thaumatin-like protein; allergen; 1.30A {Prunus avium} Back     alignment and structure
Probab=100.00  E-value=8.2e-81  Score=522.52  Aligned_cols=189  Identities=54%  Similarity=1.138  Sum_probs=182.6

Q ss_pred             CCCeEeCCCCeEEEecCCCceeeeeeccCCCCCCCCCccccccCCC-CcccCCCCCCCCCcceeEEeeCCC--Ccccccc
Q 029619            2 NGGVRLNAGENIKIEAPKGWSGRFWPRTGCTFDQSGNGKCVTGDCG-AKLNCNGAGGEPPVSLAEFTLDSP--EDFYDVS   78 (190)
Q Consensus         2 ~~G~~L~pg~s~~~~vp~~WsGriWaRtgCs~~~~g~~~C~TGdC~-g~~~C~~~~~~~p~TlaEftl~~~--~d~YdvS   78 (190)
                      ++||+|+|||+++|.||.+|+|||||||+|++++.|+++|+||||+ |.|+|++.+++||+|||||+|++.  +||||||
T Consensus        28 ~gG~~L~~G~s~s~~~p~~WsGRiWgRTgC~~d~~g~~~C~TGdCgsg~l~C~g~~g~pPaTLaEftl~~~~~~dfYDVS  107 (222)
T 2ahn_A           28 TTGFELASQASFQLDTPVPWNGRFWARTGCSTDASGKFVCATADCASGQVMCNGNGAIPPATLAEFNIPAGGGQDFYDVS  107 (222)
T ss_dssp             CSBCCBCTTCEEEEECCSSEEEEEEEEEEEEECTTSCEEEEESCCCSSSSSCTTCCCCSSCCEEEEEECSTTCEEEEEEE
T ss_pred             CCcEEcCCCCEEEEecCCCcceeEEeccccCCCCCCCcccccCCccCCceecCCCCCCCCceeeeEEecCCCCCceeeee
Confidence            5799999999999999999999999999999999999999999999 999999888899999999999875  8999999


Q ss_pred             ccccccCceeEeecCCCCCCccccccccCccCCCCCccccc-cCceeccchhhhhcCCCccccCCCCCCCCCCCCCcchh
Q 029619           79 LVDGYNVPMSIIPSGGTGGCKSVNCVSDLNTKCPEDLQQKD-TGRVVACKSACMAFNTPEYCCTGAFGGPNTCKPTNYSK  157 (190)
Q Consensus        79 lVdG~NlP~~i~p~~g~~~C~~~~C~~dl~~~CP~~l~~~~-~g~~v~C~SaC~~~~~~~~CC~g~~~~~~~C~pt~ys~  157 (190)
                      |||||||||+|+|+++.+.|+.++|.+|||..||.|||+++ +|++|||||||++|++|||||+|+|.+|++|+|++||+
T Consensus       108 lVDGfNlPm~i~P~~g~~~C~~~~C~~dln~~CP~eL~v~~~~G~~v~C~saC~af~~~~yCC~g~~~~p~~C~pt~ys~  187 (222)
T 2ahn_A          108 LVDGFNLPMSVTPQGGTGDCKTASCPANVNAVCPSELQKKGSDGSVVACLSACVKFGTPQYCCTPPQNTPETCPPTNYSE  187 (222)
T ss_dssp             CTTCBSSCEEEEEESCBSCCCCEEECSCGGGGCCGGGEEECTTSCEEEECCHHHHHCCHHHHCCTTSCSTTTSCCCHHHH
T ss_pred             cccccccceEEEecCCCCCcccCcccCchhhhCCHHHeeecCCCcEecccccccccCCCccccCCCCCCCCCCCcchHHH
Confidence            99999999999999866789999999999999999999987 78999999999999999999999999999999999999


Q ss_pred             HHhhcCCCccccccCCCCCceee-cCCCeEEEeC
Q 029619          158 IFKESCPDAYSYAYDDLTSTFTC-KDANYTISFC  190 (190)
Q Consensus       158 ~fK~~CP~AYsy~~Dd~ts~ftC-~~~~y~vtFC  190 (190)
                      +||++||+||+|||||++|+|+| ++++|+||||
T Consensus       188 ~FK~~CP~AYsYa~DD~tstftC~~~~~y~itFC  221 (222)
T 2ahn_A          188 IFHNACPDAYSYAYDDKRGTFTCNGGPNYAITFC  221 (222)
T ss_dssp             HHHHHCTTSBCSTTCTTTTCSEEESCCEEEEEEC
T ss_pred             HHhhcCcccccCCCCCCCcCeEcCCCCCEEEEeC
Confidence            99999999999999999999999 6779999999



>1du5_A Zeamatin; beta sandwich, antifungal protein; 2.50A {Zea mays} SCOP: b.25.1.1 Back     alignment and structure
>1z3q_A Thaumatin-like protein; beta sandwich, antifungal protein; 1.70A {Musa acuminata} Back     alignment and structure
>1aun_A PR-5D; antifungal protein, pathogenesis-related protein, osmotin, thaumatin-like protein; 1.80A {Nicotiana tabacum} SCOP: b.25.1.1 PDB: 2i0w_A 1pcv_A Back     alignment and structure
>2vhk_A Thaumatin-I; kinetics of crystallization, chirality, temperature, microbatch, plant protein, sweet protein; HET: TLA; 0.94A {Thaumatococcus daniellii} PDB: 2blu_A* 2blr_A* 2wbz_A 3n02_A* 3n03_A* 2vhr_A* 1lr2_A* 1lr3_A* 1lxz_A* 1ly0_A* 1pp3_A 1thi_A 2oqn_A* 1kwn_A* 2vi1_A 2vi2_A* 2vi3_A* 2vi4_A* 2vu6_A 2vu7_A* ... Back     alignment and structure
>3g7m_A Xylanase inhibitor TL-XI; beta-sheets, xylan degradation, hydrolase inhibitor; HET: GOL; 2.91A {Triticum aestivum} Back     alignment and structure
>3gd0_A Laminaripentaose-producing beta-1,3-guluase (lphase); glycoside hydrolase, 3- glucnase; 1.62A {Streptomyces matensis} PDB: 3gd9_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 190
d1du5a_206 b.25.1.1 (A:) Zeamatin {Maize (Zea mays) [TaxId: 4 1e-68
d1auna_208 b.25.1.1 (A:) Pathogenesis-related protein 5d {Com 2e-64
d1rqwa_207 b.25.1.1 (A:) Thaumatin {Ketemfe (Thaumatococcus d 7e-63
>d1du5a_ b.25.1.1 (A:) Zeamatin {Maize (Zea mays) [TaxId: 4577]} Length = 206 Back     information, alignment and structure

class: All beta proteins
fold: Osmotin, thaumatin-like protein
superfamily: Osmotin, thaumatin-like protein
family: Osmotin, thaumatin-like protein
domain: Zeamatin
species: Maize (Zea mays) [TaxId: 4577]
 Score =  206 bits (524), Expect = 1e-68
 Identities = 96/193 (49%), Positives = 117/193 (60%), Gaps = 12/193 (6%)

Query: 2   NGGVRLNAGENIKIEAPKG-WSGRFWPRTGCTFDQSGNGKCVTGDCGAKLNCNGAGGEPP 60
            GG +LN GE+ +I AP G  + R W RTGC FD SG G C TGDCG  L C G G   P
Sbjct: 21  GGGRQLNRGESWRITAPAGTTAARIWARTGCKFDASGRGSCRTGDCGGVLQCTGYG-RAP 79

Query: 61  VSLAEFTLDSPE--DFYDVSLVDGYNVPMSIIPSGGTGGCKSVNCVSDLNTKCPEDLQQK 118
            +LAE+ L      DF+D+SL+DG+NVPMS +P GG+G  +   C  D+N +CP +L+Q 
Sbjct: 80  NTLAEYALKQFNNLDFFDISLIDGFNVPMSFLPDGGSGCSRGPRCAVDVNARCPAELRQD 139

Query: 119 DTGRVVACKSACMAFNTPEYCCTGAFGGPNTCKPTNYSKIFKESCPDAYSYAYDDLTSTF 178
                  C +AC  F   EYCC G+    N C PTNYS+ FK  CPDAYSY  DD TSTF
Sbjct: 140 -----GVCNNACPVFKKDEYCCVGS--AANDCHPTNYSRYFKGQCPDAYSYPKDDATSTF 192

Query: 179 TCKD-ANYTISFC 190
           TC    NY + FC
Sbjct: 193 TCPAGTNYKVVFC 205


>d1auna_ b.25.1.1 (A:) Pathogenesis-related protein 5d {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Length = 208 Back     information, alignment and structure
>d1rqwa_ b.25.1.1 (A:) Thaumatin {Ketemfe (Thaumatococcus daniellii) [TaxId: 4621]} Length = 207 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query190
d1auna_208 Pathogenesis-related protein 5d {Common tobacco (N 100.0
d1du5a_206 Zeamatin {Maize (Zea mays) [TaxId: 4577]} 100.0
d1rqwa_207 Thaumatin {Ketemfe (Thaumatococcus daniellii) [Tax 100.0
>d1auna_ b.25.1.1 (A:) Pathogenesis-related protein 5d {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Back     information, alignment and structure
class: All beta proteins
fold: Osmotin, thaumatin-like protein
superfamily: Osmotin, thaumatin-like protein
family: Osmotin, thaumatin-like protein
domain: Pathogenesis-related protein 5d
species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=100.00  E-value=2.1e-72  Score=465.64  Aligned_cols=178  Identities=47%  Similarity=1.016  Sum_probs=167.9

Q ss_pred             CCCeEeCCCCeEEEecCCCc-eeeeeeccCCCCCCCCCccccccCCCCcccCCCCCCCCCcceeEEeeCCC--Ccccccc
Q 029619            2 NGGVRLNAGENIKIEAPKGW-SGRFWPRTGCTFDQSGNGKCVTGDCGAKLNCNGAGGEPPVSLAEFTLDSP--EDFYDVS   78 (190)
Q Consensus         2 ~~G~~L~pg~s~~~~vp~~W-sGriWaRtgCs~~~~g~~~C~TGdC~g~~~C~~~~~~~p~TlaEftl~~~--~d~YdvS   78 (190)
                      ++||+|+||++++|.+|.+| +|||||||+|++|+.|+++|+||||+|.|+|++. ++||+|||||+|+..  +||||||
T Consensus        22 ~gg~~L~~g~s~~~~~p~~~~~gRiW~RTgC~~d~~G~~~C~TGdCgg~l~C~~~-G~pP~TlaEftl~~~~~~DfYDvS  100 (208)
T d1auna_          22 GGGRRLERGQSWWFWAPPGTKMARIWGRTNCNFDGAGRGWCQTGDCGGVLECKGW-GKPPNTLAEYALNQFSNLDFWDIS  100 (208)
T ss_dssp             TEEEEECTTCEEEEECCTTCCSEEEEEEEEEEECTTSBEEEEESCCTTBSSCSSC-CCSSCCEEEEEEEEGGGEEEEEEE
T ss_pred             CCCcccCCCCceEEECCCCCcccceeecCCCCcCCCCccceeccCcCCeEecCCC-CCCCcceEEEEeccCCCcceeccc
Confidence            57999999999999999998 5999999999999999999999999999999986 579999999999864  8999999


Q ss_pred             ccccccCceeEeecC-CCCCCccccccccCccCCCCCccccccCceeccchhhhhcCCCccccCCCCCCCCCCCCCcchh
Q 029619           79 LVDGYNVPMSIIPSG-GTGGCKSVNCVSDLNTKCPEDLQQKDTGRVVACKSACMAFNTPEYCCTGAFGGPNTCKPTNYSK  157 (190)
Q Consensus        79 lVdG~NlP~~i~p~~-g~~~C~~~~C~~dl~~~CP~~l~~~~~g~~v~C~SaC~~~~~~~~CC~g~~~~~~~C~pt~ys~  157 (190)
                      |||||||||+|+|+. ++..|+..+|.+|||..||.||||+.     ||+|||.+|++|||||+     +++|+|++||+
T Consensus       101 lVDGfNlP~~i~P~~~~~~~C~~~~C~~dln~~CP~~L~v~~-----~C~saC~~~~~~~~CCt-----~~~C~pt~ys~  170 (208)
T d1auna_         101 VIDGFNIPMSFGPTKPGPGKCHGIQCTANINGECPGSLRVPG-----GCNNPCTTFGGQQYCCT-----QGPCGPTELSR  170 (208)
T ss_dssp             CTTCBSSCEEEEESSCCSTTCSCEEECSCHHHHCCTTTEETT-----EECCHHHHTCSHHHHCT-----TSCCCCCHHHH
T ss_pred             cccccccceEEeccCCCCCCcCcccccCCccccCCHhhccCC-----CCccceeecCCCccccC-----CCcCCCchHHH
Confidence            999999999999986 45689999999999999999999977     89999999999999997     46899999999


Q ss_pred             HHhhcCCCccccccCCCCCceee-cC-CCeEEEeC
Q 029619          158 IFKESCPDAYSYAYDDLTSTFTC-KD-ANYTISFC  190 (190)
Q Consensus       158 ~fK~~CP~AYsy~~Dd~ts~ftC-~~-~~y~vtFC  190 (190)
                      +||++||+||||||||++|+|+| ++ ++|+||||
T Consensus       171 ~FK~~CP~AYsYa~Dd~sstftC~~g~~~Y~VtFC  205 (208)
T d1auna_         171 WFKQRCPDAYSYPQDDPTSTFTCTSWTTDYKVMFC  205 (208)
T ss_dssp             HHHHHCTTSBCSTTCCTTTCEEEETTSCCEEEEES
T ss_pred             HHHhhCCcccccCcCCCCcceEcCCCCCCEEEEeC
Confidence            99999999999999999999999 54 89999999



>d1du5a_ b.25.1.1 (A:) Zeamatin {Maize (Zea mays) [TaxId: 4577]} Back     information, alignment and structure
>d1rqwa_ b.25.1.1 (A:) Thaumatin {Ketemfe (Thaumatococcus daniellii) [TaxId: 4621]} Back     information, alignment and structure