Citrus Sinensis ID: 029631

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190
Protein Sequence
MQMILSSSSSSLPIPSFPCKCFSTFHALRTFFPQKKHIVRCSSSHNLKDNGFHCKVKLKRRVVPFLLFSSGLFPTLSASGKTKSKNPYDEKRLLEQNKRMQKENSAPEGFPNFIREGFEVKVVTSENYTKRDSGLIYRDFEVGKGDCPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPG
Secondary Structure (PSIPRED)
ccEEcccccccccccccccccccccccccccccccccEEEEEcccccccccHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHccccccEEcccccEEEEEEcccccccccccEEEEEEEEEcccccEEcccccccccEEEEcccccEEcc
Secondary Structure Prediction (SSPRO)
ccEEEEcccccccccccccEEEEEEEEEcccccccccEEEEcccccccccccHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHccccHHccHHHHcccEEEEEcccccEEccccEEEEEEEEccccccccccEEEEEEEEEcccccEEcccccccccEEEEEccccEccc
Coil and Loop (DISEMBL)
mqmilsssssslpipsfpckcfstfhalrtffpqkkhivrcssshnlkdngfhckvklkrRVVPFLlfssglfptlsasgktksknpydeKRLLEQNKRmqkensapegfpnfirEGFEVKVvtsenytkrdsgliyrdfevgkgdcpkdgQQVIFHYIGynesgrridstylqgsparirmgtnalvpg
Flexible Loop (DISEMBL)
mqmilsssssslpipsFPCKCFSTFHALRTFFPQKKHIVRCSSSHNLKDNGFHCKVKLKRRVVPFLLFSsglfptlsasgktksknpydeKRLLEQNkrmqkensapegfpnfireGFEVKVvtsenytkrdsgliyrDFEVGKGDCPKDGQQVIFHYIgynesgrridstylqgsparirmgtnalvpg
Low Complexity Region (SEG)
MQMilsssssslpipsFPCKCFSTFHALRTFFPQKKHIVRCSSSHNLKDNGFHCKVKLKRRVVPFLLFSSGLFPTLSASGKTKSKNPYDEKRLLEQNKRMQKENSAPEGFPNFIREGFEVKVVTSENYTKRDSGLIYRDFEVGKGDCPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPG
Disordered region (IsUnstruct)
**************PSFPCKCFSTFHALRTFFPQKKHIVRCSSSHNLKDNGFHCKVKLKRRVVPFLLFSSGLFPT***********************************PNFIREGFEVKVVTSENYTKRDSGLIYRDFEVGKGDCPKDGQQVIFHYIGYNESGRRIDSTYL*****************
Disordered Region (DISOPRED)
*********SSLPIPSFPCKCFSTFHA*****************************KLKRRVVPFLLFSSGLF********************************************FEVKVVTSENYTKRDSGLIYRDFEVGKGDCPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPG
Disordered Region (DISEMBL)
************PIPSFPCKCFSTFHALRTFFPQKKHIVRCSSSHNLKDNGFHCKVKLKRRVVPFLLFSSGLFPTLSAS********YDEKRLLEQNKRMQKENSAPEGFPNFIREGFEVKVVTSENYTKRDSGLIYRDFEVGKGDCPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPG
Disordered Region (DISPRO)
********SSSLPIPSFPCKCFSTFHALRTFFPQKKHIVRCSSSHNLKDNGFHCKVKLKRRVVPFLLFSSGLFPTLSA*G***SKNPYDEKRLLEQNKRMQKENSAPEGFPNFIREGFEVKVVTSENYTKRDSGLIYRDFEVGKGDCPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALV**
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MQMILSSSSSSLPIPSFPCKCFSTFHALRTFFPQKKHIVRCSSSHNLKDNGFHCKVKLKRRVVPFLLFSSGLFPTLSASGKTKSKNPYDEKRLLEQNKRMQKENSAPEGFPNFIREGFEVKVVTSENYTKRDSGLIYRDFEVGKGDCPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	190	2.2.26 [Sep-21-2011]
Q0WRJ7	242	Peptidyl-prolyl cis-trans	yes	no	0.768	0.603	0.707	4e-51
P65764	270	FKBP-type peptidyl-prolyl	yes	no	0.442	0.311	0.329	5e-06
P65765	270	FKBP-type peptidyl-prolyl	N/A	no	0.442	0.311	0.329	5e-06
P45523	270	FKBP-type peptidyl-prolyl	N/A	no	0.442	0.311	0.329	6e-06
O22870	223	Peptidyl-prolyl cis-trans	no	no	0.584	0.497	0.287	2e-05
Q9SCY2	208	Peptidyl-prolyl cis-trans	no	no	0.352	0.322	0.358	0.0005

>sp|Q0WRJ7|FK202_ARATH Peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic OS=Arabidopsis thaliana GN=FKBP20-2 PE=1 SV=1

 Score =  200 bits (509), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 109/154 (70%), Positives = 125/154 (81%), Gaps = 8/154 (5%)

Query: 39  VRCSSSHNLKDNGFHCKVKLKRRVVPFLLFSSG--LFPTLSASGKTKSKNPYDEKRLLEQ 96
           V CS S   KD    C   L RR + ++L +S   L P LS+S KTKSK+PYDE+RLLEQ
Sbjct: 30  VCCSLSEEPKD---QC---LSRRSLVYVLVASPCLLLPALSSSAKTKSKSPYDERRLLEQ 83

Query: 97  NKRMQKENSAPEGFPNFIREGFEVKVVTSENYTKRDSGLIYRDFEVGKGDCPKDGQQVIF 156
           NKR+Q+EN+AP+ FPNF+REGFEVKV+ S+NY K DSGLIYRDF VG+GD PKDGQQV F
Sbjct: 84  NKRIQRENNAPDEFPNFVREGFEVKVLASDNYIKADSGLIYRDFNVGQGDFPKDGQQVTF 143

Query: 157 HYIGYNESGRRIDSTYLQGSPARIRMGTNALVPG 190
           HYIGYNESGRRIDSTY+QGSPARIRMGTNALVPG
Sbjct: 144 HYIGYNESGRRIDSTYIQGSPARIRMGTNALVPG 177

PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (By similarity). Involved in the accumulation of the PSII complex.
Arabidopsis thaliana (taxid: 3702)
EC: 5EC: .EC: 2EC: .EC: 1EC: .EC: 8

>sp|P65764|FKBA_ECOL6 FKBP-type peptidyl-prolyl cis-trans isomerase FkpA OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=fkpA PE=3 SV=1

 Score = 50.8 bits (120), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 10/94 (10%)

Query: 99  RMQKENSAPEGFPNFIREGF--EVKVVTSENYTKRDSGLIYRDFEVGKGDCPKDGQQVIF 156
           +M+K+ +  E      RE F  E  V TS       +GL+Y+  E GKG+ PKD   V+ 
Sbjct: 116 KMEKDAADNEAKGKEYREKFAKEKGVKTSS------TGLVYQVVEAGKGEAPKDSDTVVV 169

Query: 157 HYIGYNESGRRIDSTYLQGSPARIRMGTNALVPG 190
           +Y G    G+  D++Y +G P   R+  + ++PG
Sbjct: 170 NYKGTLIDGKEFDNSYTRGEPLSFRL--DGVIPG 201

PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.

Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) (taxid: 199310)

EC: 5

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 8

>sp|P65765|FKBA_ECO57 FKBP-type peptidyl-prolyl cis-trans isomerase FkpA OS=Escherichia coli O157:H7 GN=fkpA PE=3 SV=1

 Score = 50.8 bits (120), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 10/94 (10%)

Query: 99  RMQKENSAPEGFPNFIREGF--EVKVVTSENYTKRDSGLIYRDFEVGKGDCPKDGQQVIF 156
           +M+K+ +  E      RE F  E  V TS       +GL+Y+  E GKG+ PKD   V+ 
Sbjct: 116 KMEKDAADNEAKGKEYREKFAKEKGVKTSS------TGLVYQVVEAGKGEAPKDSDTVVV 169

Query: 157 HYIGYNESGRRIDSTYLQGSPARIRMGTNALVPG 190
           +Y G    G+  D++Y +G P   R+  + ++PG
Sbjct: 170 NYKGTLIDGKEFDNSYTRGEPLSFRL--DGVIPG 201

PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.

Escherichia coli O157:H7 (taxid: 83334)

EC: 5

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 8

>sp|P45523|FKBA_ECOLI FKBP-type peptidyl-prolyl cis-trans isomerase FkpA OS=Escherichia coli (strain K12) GN=fkpA PE=1 SV=1

 Score = 50.8 bits (120), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 10/94 (10%)

Query: 99  RMQKENSAPEGFPNFIREGF--EVKVVTSENYTKRDSGLIYRDFEVGKGDCPKDGQQVIF 156
           +M+K+ +  E      RE F  E  V TS       +GL+Y+  E GKG+ PKD   V+ 
Sbjct: 116 KMEKDAADNEAKGKEYREKFAKEKGVKTSS------TGLVYQVVEAGKGEAPKDSDTVVV 169

Query: 157 HYIGYNESGRRIDSTYLQGSPARIRMGTNALVPG 190
           +Y G    G+  D++Y +G P   R+  + ++PG
Sbjct: 170 NYKGTLIDGKEFDNSYTRGEPLSFRL--DGVIPG 201

PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.

Escherichia coli (strain K12) (taxid: 83333)

EC: 5

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 8

>sp|O22870|FK163_ARATH Peptidyl-prolyl cis-trans isomerase FKBP16-3, chloroplastic OS=Arabidopsis thaliana GN=FKBP16-3 PE=1 SV=2

 Score = 49.3 bits (116), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 58/132 (43%), Gaps = 21/132 (15%)

Query: 59  KRRVVPFLLFSSGLFPTLSASGKTKSKNPYDEKRLLEQNKRMQKENSAPEGFPNFIREGF 118
           +R  +  +L  SG     S +       P D+ RL E     + EN              
Sbjct: 53  RREAMLLVLGVSGGLSMSSLAAYAAGLPPEDKPRLCEAECEKELEN-------------- 98

Query: 119 EVKVVTSENYTKRDSGLIYRDFEVGKGDCPKDGQQVIFHYIGYNESGRRIDSTYLQGSPA 178
            V +VT+E      SGL Y+D +VG+G  P  G QV  +Y+    SG+  DS+  +G P 
Sbjct: 99  -VPMVTTE------SGLQYKDIKVGRGPSPPVGFQVAANYVAMVPSGQIFDSSLEKGLPY 151

Query: 179 RIRMGTNALVPG 190
             R+G+  ++ G
Sbjct: 152 LFRVGSGQVIKG 163

PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.

Arabidopsis thaliana (taxid: 3702)

EC: 5

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 8

>sp|Q9SCY2|FKB13_ARATH Peptidyl-prolyl cis-trans isomerase FKBP13, chloroplastic OS=Arabidopsis thaliana GN=FKBP13 PE=1 SV=2

 Score = 44.3 bits (103), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 24/67 (35%), Positives = 36/67 (53%)

Query: 124 TSENYTKRDSGLIYRDFEVGKGDCPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMG 183
           TS  ++   SGL + D  VG G     GQ +  HY+G  E+G+  DS+Y +G P   R+G
Sbjct: 82  TSCEFSVSPSGLAFCDKVVGYGPEAVKGQLIKAHYVGKLENGKVFDSSYNRGKPLTFRIG 141

Query: 184 TNALVPG 190
              ++ G
Sbjct: 142 VGEVIKG 148

PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. Responsive of the major PPIase activity in the chloroplast thylakoid lumen. Regulates the accumulation of Rieske protein, an essential component of the photosynthetic electron transport chain.

Arabidopsis thaliana (taxid: 3702)

EC: 5

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 8

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	190
225453422	258	PREDICTED: FKBP-type peptidyl-prolyl cis	0.989	0.728	0.654	5e-65
255541078	265	fk506-binding protein, putative [Ricinus	0.815	0.584	0.737	3e-60
224137178	210	predicted protein [Populus trichocarpa]	0.763	0.690	0.713	6e-58
351726032	248	uncharacterized protein LOC100305486 [Gl	0.931	0.713	0.605	3e-57
449431986	260	PREDICTED: peptidyl-prolyl cis-trans iso	0.989	0.723	0.591	1e-56
388505048	246	unknown [Lotus japonicus]	0.873	0.674	0.645	6e-56
356520790	248	PREDICTED: FKBP-type peptidyl-prolyl cis	0.889	0.681	0.620	8e-56
297820896	244	immunophilin [Arabidopsis lyrata subsp.	0.768	0.598	0.720	3e-51
7287985	197	hypothetical protein [Arabidopsis thalia	0.747	0.720	0.715	1e-49
30695188	242	FKBP-type peptidyl-prolyl cis-trans isom	0.768	0.603	0.707	2e-49

>gi|225453422|ref|XP_002274957.1| PREDICTED: FKBP-type peptidyl-prolyl cis-trans isomerase 6, chloroplastic [Vitis vinifera] gi|297734593|emb|CBI16644.3| unnamed protein product [Vitis vinifera]

 Score =  252 bits (644), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 127/194 (65%), Positives = 147/194 (75%), Gaps = 6/194 (3%)

Query: 3   MILSSSSSSLPIPSFPCKCFSTFHALRTFFPQKKHIVRCSSSHNLKDNG------FHCKV 56
           M+   +   LP P  P +  S    + +FF  KK I+ C SS+NLKD           + 
Sbjct: 1   MLWLPTHPLLPQPYIPYRYLSACRTVGSFFSLKKPILHCRSSYNLKDYREQKGCVLPYEE 60

Query: 57  KLKRRVVPFLLFSSGLFPTLSASGKTKSKNPYDEKRLLEQNKRMQKENSAPEGFPNFIRE 116
            L+RR++ F L SSG FPTLS+S KTKSKNPYDEKRLL+QNKR+QKEN+APE FPNF+RE
Sbjct: 61  NLRRRLLIFFLVSSGCFPTLSSSAKTKSKNPYDEKRLLQQNKRIQKENNAPEDFPNFVRE 120

Query: 117 GFEVKVVTSENYTKRDSGLIYRDFEVGKGDCPKDGQQVIFHYIGYNESGRRIDSTYLQGS 176
           GFEVKVVT ENY   DSGLIYRDFEVGKGDCPK GQQV FHY+GYNESGRRIDS+Y+QGS
Sbjct: 121 GFEVKVVTPENYITSDSGLIYRDFEVGKGDCPKAGQQVTFHYVGYNESGRRIDSSYMQGS 180

Query: 177 PARIRMGTNALVPG 190
           PA+IRMGTNALVPG
Sbjct: 181 PAKIRMGTNALVPG 194

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255541078|ref|XP_002511603.1| fk506-binding protein, putative [Ricinus communis] gi|223548783|gb|EEF50272.1| fk506-binding protein, putative [Ricinus communis]

 Score =  236 bits (602), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 118/160 (73%), Positives = 133/160 (83%), Gaps = 5/160 (3%)

Query: 35  KKHIVRCSSSHNLKDNGF--HCKVKLKRRVVPFLLFSSG--LFPTLSASGKTKSKNPYDE 90
           KK  VRC    +L+ NG+  HC+  L+RR + F   SS   LF TL + GKTKSKNPYDE
Sbjct: 36  KKSTVRCFDDDSLR-NGYLLHCEETLRRRFLLFFSASSSVLLFQTLPSFGKTKSKNPYDE 94

Query: 91  KRLLEQNKRMQKENSAPEGFPNFIREGFEVKVVTSENYTKRDSGLIYRDFEVGKGDCPKD 150
           +RLLEQNKR+QKEN+AP+ FPNF+REGFEVKVVTSENY KRDSGLIYRDFEVG GDCPK 
Sbjct: 95  RRLLEQNKRVQKENNAPDDFPNFVREGFEVKVVTSENYVKRDSGLIYRDFEVGNGDCPKA 154

Query: 151 GQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPG 190
           GQQV FHY+GYNESGRRIDSTYLQG+PA+IRMGTNALVPG
Sbjct: 155 GQQVTFHYVGYNESGRRIDSTYLQGAPAKIRMGTNALVPG 194

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224137178|ref|XP_002327057.1| predicted protein [Populus trichocarpa] gi|222835372|gb|EEE73807.1| predicted protein [Populus trichocarpa]

 Score =  229 bits (583), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 112/157 (71%), Positives = 124/157 (78%), Gaps = 12/157 (7%)

Query: 34  QKKHIVRCSSSHNLKDNGFHCKVKLKRRVVPFLLFSSGLFPTLSASGKTKSKNPYDEKRL 93
           Q  H+V C               KL+RR + F  FSSGL  T  + GKTKSKNPYDE+RL
Sbjct: 2   QNGHVVLCHEE------------KLRRRFLLFFSFSSGLLSTFPSYGKTKSKNPYDERRL 49

Query: 94  LEQNKRMQKENSAPEGFPNFIREGFEVKVVTSENYTKRDSGLIYRDFEVGKGDCPKDGQQ 153
           LEQNKR+QKEN+ PE FP+FIREGFEVKVV  ENY KRDSGLIYRDFEVG+GDCPKDGQQ
Sbjct: 50  LEQNKRIQKENNVPEDFPSFIREGFEVKVVAPENYIKRDSGLIYRDFEVGEGDCPKDGQQ 109

Query: 154 VIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPG 190
           V FHY+GYNESGRRIDSTYLQGSPA+IRMGTNAL+PG
Sbjct: 110 VTFHYVGYNESGRRIDSTYLQGSPAKIRMGTNALIPG 146

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351726032|ref|NP_001236089.1| uncharacterized protein LOC100305486 [Glycine max] gi|255625657|gb|ACU13173.1| unknown [Glycine max]

 Score =  226 bits (577), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 118/195 (60%), Positives = 144/195 (73%), Gaps = 18/195 (9%)

Query: 3   MILSSSSSSLPIPSFPCKCFSTFHALRTFFPQKKHIVRCSSSHNLKD----NGF---HCK 55
           M+L+S  S+     FPC          T F Q+K +    ++   KD    +G    H +
Sbjct: 1   MLLASFRSN-----FPCA------VQGTVFCQRKQLTHGCTNQKSKDYIVQDGCMLQHSE 49

Query: 56  VKLKRRVVPFLLFSSGLFPTLSASGKTKSKNPYDEKRLLEQNKRMQKENSAPEGFPNFIR 115
             L+R +   +L S+G+FPTLS+ GKTKSKNPYDEKRLL+QN+R+QKEN+APE FPNF+R
Sbjct: 50  KALRRTLFLSVLVSAGVFPTLSSYGKTKSKNPYDEKRLLQQNRRIQKENNAPEDFPNFVR 109

Query: 116 EGFEVKVVTSENYTKRDSGLIYRDFEVGKGDCPKDGQQVIFHYIGYNESGRRIDSTYLQG 175
           EGF+VKVV+S+NY K DSGLIYRDF VG+GDCPKDGQQV FHYIGYNESGRRIDSTYLQG
Sbjct: 110 EGFQVKVVSSDNYIKSDSGLIYRDFVVGQGDCPKDGQQVTFHYIGYNESGRRIDSTYLQG 169

Query: 176 SPARIRMGTNALVPG 190
           +PA+IRMGT  LVPG
Sbjct: 170 TPAKIRMGTKGLVPG 184

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449431986|ref|XP_004133781.1| PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic-like [Cucumis sativus]

 Score =  224 bits (571), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 116/196 (59%), Positives = 143/196 (72%), Gaps = 8/196 (4%)

Query: 3   MILSSSSSSLP--IPSFPCKCFSTFHALRTFFPQKKHIVR---CSS-SHNLKDNGF--HC 54
           M+++ S+ SL     S   + FS     R F  Q K + R   C S +H+ ++N +    
Sbjct: 1   MLITCSTPSLTSSAHSLSYRAFSGCATSRAFITQTKQVQRYCSCQSFNHSSEENSYISLS 60

Query: 55  KVKLKRRVVPFLLFSSGLFPTLSASGKTKSKNPYDEKRLLEQNKRMQKENSAPEGFPNFI 114
               +R+++ F L ++ LFPT  +S KTK+KNPYDE+RLLEQNKR QKEN+AP  FP+F+
Sbjct: 61  NENSRRKILLFFLSTTALFPTRHSSAKTKNKNPYDERRLLEQNKRRQKENNAPVDFPSFV 120

Query: 115 REGFEVKVVTSENYTKRDSGLIYRDFEVGKGDCPKDGQQVIFHYIGYNESGRRIDSTYLQ 174
           REGFEVKV+  E+Y KRDSGLIY D EVG GDCPKDGQQVIFHY+GYNESGRRIDSTYLQ
Sbjct: 121 REGFEVKVIAPESYVKRDSGLIYWDIEVGNGDCPKDGQQVIFHYVGYNESGRRIDSTYLQ 180

Query: 175 GSPARIRMGTNALVPG 190
           GSPARIR+GTNALVPG
Sbjct: 181 GSPARIRVGTNALVPG 196

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388505048|gb|AFK40590.1| unknown [Lotus japonicus]

 Score =  222 bits (566), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 111/172 (64%), Positives = 134/172 (77%), Gaps = 6/172 (3%)

Query: 25  FHALRTFFPQKKHIV-----RCSSSHNLKDNG-FHCKVKLKRRVVPFLLFSSGLFPTLSA 78
           F    T F Q+K +      + S  + ++D+   H    L+R+++  +L S+G+FPTLS+
Sbjct: 10  FSVQGTIFSQRKQLTHRYTNQKSEEYPVQDSCILHSARALRRKLLLSVLVSTGVFPTLSS 69

Query: 79  SGKTKSKNPYDEKRLLEQNKRMQKENSAPEGFPNFIREGFEVKVVTSENYTKRDSGLIYR 138
            GKTK  NP++EKRLL+QNK++QK N APE FPNFIREGFEVKV++SENY K DSGLIYR
Sbjct: 70  YGKTKGINPFNEKRLLQQNKQIQKANYAPEDFPNFIREGFEVKVISSENYIKCDSGLIYR 129

Query: 139 DFEVGKGDCPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPG 190
           DFEVGKGDCPKDGQQV FHY GYNESGRRIDSTYLQGSPA+IRMGT ALVPG
Sbjct: 130 DFEVGKGDCPKDGQQVTFHYTGYNESGRRIDSTYLQGSPAKIRMGTKALVPG 181

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356520790|ref|XP_003529043.1| PREDICTED: FKBP-type peptidyl-prolyl cis-trans isomerase 6, chloroplastic-like [Glycine max]

 Score =  221 bits (564), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 113/182 (62%), Positives = 133/182 (73%), Gaps = 13/182 (7%)

Query: 16  SFPCKCFSTFHALRTFFPQKKHIVRCSSSHNLKDNGF-------HCKVKLKRRVVPFLLF 68
           +FPC          T F Q+K +         KD          H +  L+R +   +L 
Sbjct: 9   NFPCT------VQGTIFCQRKQLTHGCKDQKSKDYIVQDSCMLQHSEKALRRTLFLSVLV 62

Query: 69  SSGLFPTLSASGKTKSKNPYDEKRLLEQNKRMQKENSAPEGFPNFIREGFEVKVVTSENY 128
           S+G+FPTLS+ GKTKSKNPYDEKRLL+QN+R+QKEN+APE FPNF+REGF+VKVV+S+NY
Sbjct: 63  SAGVFPTLSSYGKTKSKNPYDEKRLLQQNRRIQKENNAPEDFPNFVREGFQVKVVSSDNY 122

Query: 129 TKRDSGLIYRDFEVGKGDCPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALV 188
            K DSGLIYRDF VG+GD PKDGQQV FHYIGYNESGRRIDSTYLQGSPA+IRMGT  LV
Sbjct: 123 VKSDSGLIYRDFVVGQGDFPKDGQQVTFHYIGYNESGRRIDSTYLQGSPAKIRMGTKGLV 182

Query: 189 PG 190
           PG
Sbjct: 183 PG 184

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297820896|ref|XP_002878331.1| immunophilin [Arabidopsis lyrata subsp. lyrata] gi|297324169|gb|EFH54590.1| immunophilin [Arabidopsis lyrata subsp. lyrata]

 Score =  206 bits (525), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 111/154 (72%), Positives = 126/154 (81%), Gaps = 8/154 (5%)

Query: 39  VRCSSSHNLKDNGFHCKVKLKRRVVPFLLFSSG--LFPTLSASGKTKSKNPYDEKRLLEQ 96
           V CS S   KD        L RR + ++L +S   LFP LS+S KTKSK+PYDE+RLLEQ
Sbjct: 32  VCCSLSEEPKDQ------SLSRRSLVYVLVASPCLLFPALSSSAKTKSKSPYDERRLLEQ 85

Query: 97  NKRMQKENSAPEGFPNFIREGFEVKVVTSENYTKRDSGLIYRDFEVGKGDCPKDGQQVIF 156
           NKR+Q+EN+AP+ FPNF+REGFEVKVV SENY K DSGLIYRDF+VG+GD PKDGQQV F
Sbjct: 86  NKRIQRENNAPDEFPNFVREGFEVKVVASENYIKADSGLIYRDFDVGQGDSPKDGQQVTF 145

Query: 157 HYIGYNESGRRIDSTYLQGSPARIRMGTNALVPG 190
           HYIGYNESGRRIDSTY+QGSPARIRMGTNALVPG
Sbjct: 146 HYIGYNESGRRIDSTYIQGSPARIRMGTNALVPG 179

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|7287985|emb|CAB81823.1| hypothetical protein [Arabidopsis thaliana]

 Score =  201 bits (511), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 103/144 (71%), Positives = 120/144 (83%), Gaps = 2/144 (1%)

Query: 49  DNGFHCKVKLKRRVVPFLLFSSG--LFPTLSASGKTKSKNPYDEKRLLEQNKRMQKENSA 106
           D  +     L RR + ++L +S   L P LS+S KTKSK+PYDE+RLLEQNKR+Q+EN+A
Sbjct: 21  DKAWSFNCSLSRRSLVYVLVASPCLLLPALSSSAKTKSKSPYDERRLLEQNKRIQRENNA 80

Query: 107 PEGFPNFIREGFEVKVVTSENYTKRDSGLIYRDFEVGKGDCPKDGQQVIFHYIGYNESGR 166
           P+ FPNF+REGFEVKV+ S+NY K DSGLIYRDF VG+GD PKDGQQV FHYIGYNESGR
Sbjct: 81  PDEFPNFVREGFEVKVLASDNYIKADSGLIYRDFNVGQGDFPKDGQQVTFHYIGYNESGR 140

Query: 167 RIDSTYLQGSPARIRMGTNALVPG 190
           RIDSTY+QGSPARIRMGTNALVPG
Sbjct: 141 RIDSTYIQGSPARIRMGTNALVPG 164

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30695188|ref|NP_567098.2| FKBP-type peptidyl-prolyl cis-trans isomerase 6 [Arabidopsis thaliana] gi|122236257|sp|Q0WRJ7.1|FK202_ARATH RecName: Full=Peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic; Short=PPIase FKBP20-2; AltName: Full=FK506-binding protein 20-2; Short=AtFKBP20-2; AltName: Full=Immunophilin FKBP20-2; AltName: Full=Rotamase; Flags: Precursor gi|110736573|dbj|BAF00252.1| hypothetical protein [Arabidopsis thaliana] gi|119360117|gb|ABL66787.1| At3g60370 [Arabidopsis thaliana] gi|332646531|gb|AEE80052.1| FKBP-type peptidyl-prolyl cis-trans isomerase 6 [Arabidopsis thaliana]

 Score =  200 bits (509), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 109/154 (70%), Positives = 125/154 (81%), Gaps = 8/154 (5%)

Query: 39  VRCSSSHNLKDNGFHCKVKLKRRVVPFLLFSSG--LFPTLSASGKTKSKNPYDEKRLLEQ 96
           V CS S   KD    C   L RR + ++L +S   L P LS+S KTKSK+PYDE+RLLEQ
Sbjct: 30  VCCSLSEEPKD---QC---LSRRSLVYVLVASPCLLLPALSSSAKTKSKSPYDERRLLEQ 83

Query: 97  NKRMQKENSAPEGFPNFIREGFEVKVVTSENYTKRDSGLIYRDFEVGKGDCPKDGQQVIF 156
           NKR+Q+EN+AP+ FPNF+REGFEVKV+ S+NY K DSGLIYRDF VG+GD PKDGQQV F
Sbjct: 84  NKRIQRENNAPDEFPNFVREGFEVKVLASDNYIKADSGLIYRDFNVGQGDFPKDGQQVTF 143

Query: 157 HYIGYNESGRRIDSTYLQGSPARIRMGTNALVPG 190
           HYIGYNESGRRIDSTY+QGSPARIRMGTNALVPG
Sbjct: 144 HYIGYNESGRRIDSTYIQGSPARIRMGTNALVPG 177

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	190
TAIR|locus:2103366	242	AT3G60370 "AT3G60370" [Arabido	0.768	0.603	0.707	1.7e-52
UNIPROTKB|Q7XHR0	258	P0477A12.35 "Peptidyl-prolyl c	0.694	0.511	0.681	6.9e-47
UNIPROTKB|A8HTG4	269	FKB20-2 "Peptidyl-prolyl cis-t	0.526	0.371	0.544	4e-26
UNIPROTKB|Q7NMC5	161	glr0841 "Peptidyl-prolyl cis-t	0.336	0.397	0.390	8.7e-08
UNIPROTKB|P45523	270	fkpA [Escherichia coli K-12 (t	0.447	0.314	0.322	6.4e-06
UNIPROTKB|Q74AS7	156	GSU2274 "Peptidyl-prolyl cis-t	0.305	0.371	0.379	1.4e-05
TIGR_CMR|GSU_2274	156	GSU_2274 "FKBP-type peptidyl-p	0.305	0.371	0.379	1.4e-05
UNIPROTKB|A8IW09	208	FKB16-3 "Peptidyl-prolyl cis-t	0.305	0.278	0.396	7.6e-05
UNIPROTKB|A9WGZ8	237	Caur_0860 "Peptidyl-prolyl cis	0.305	0.244	0.379	0.00011
TAIR|locus:2058218	223	AT2G43560 "AT2G43560" [Arabido	0.436	0.372	0.321	0.00014

TAIR|locus:2103366 AT3G60370 "AT3G60370" [Arabidopsis thaliana (taxid:3702)]

 Score = 544 (196.6 bits), Expect = 1.7e-52, P = 1.7e-52
 Identities = 109/154 (70%), Positives = 125/154 (81%)

Query:    39 VRCSSSHNLKDNGFHCKVKLKRRVVPFLLFSSG--LFPTLSASGKTKSKNPYDEKRLLEQ 96
             V CS S   KD    C   L RR + ++L +S   L P LS+S KTKSK+PYDE+RLLEQ
Sbjct:    30 VCCSLSEEPKDQ---C---LSRRSLVYVLVASPCLLLPALSSSAKTKSKSPYDERRLLEQ 83

Query:    97 NKRMQKENSAPEGFPNFIREGFEVKVVTSENYTKRDSGLIYRDFEVGKGDCPKDGQQVIF 156
             NKR+Q+EN+AP+ FPNF+REGFEVKV+ S+NY K DSGLIYRDF VG+GD PKDGQQV F
Sbjct:    84 NKRIQRENNAPDEFPNFVREGFEVKVLASDNYIKADSGLIYRDFNVGQGDFPKDGQQVTF 143

Query:   157 HYIGYNESGRRIDSTYLQGSPARIRMGTNALVPG 190
             HYIGYNESGRRIDSTY+QGSPARIRMGTNALVPG
Sbjct:   144 HYIGYNESGRRIDSTYIQGSPARIRMGTNALVPG 177

GO:0003755 "peptidyl-prolyl cis-trans isomerase activity" evidence=ISS;IDA

GO:0005528 "FK506 binding" evidence=ISS;IBA

GO:0005576 "extracellular region" evidence=ISM

GO:0006457 "protein folding" evidence=IEA

GO:0016020 "membrane" evidence=IBA

GO:0018208 "peptidyl-proline modification" evidence=IBA

GO:0009543 "chloroplast thylakoid lumen" evidence=IDA

GO:0031977 "thylakoid lumen" evidence=IDA

GO:0009579 "thylakoid" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0010207 "photosystem II assembly" evidence=RCA;IMP

GO:0016491 "oxidoreductase activity" evidence=IDA

GO:0006364 "rRNA processing" evidence=RCA

GO:0009902 "chloroplast relocation" evidence=RCA

GO:0010027 "thylakoid membrane organization" evidence=RCA

GO:0019761 "glucosinolate biosynthetic process" evidence=RCA

GO:0035304 "regulation of protein dephosphorylation" evidence=RCA

GO:0042793 "transcription from plastid promoter" evidence=RCA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA

UNIPROTKB|Q7XHR0 P0477A12.35 "Peptidyl-prolyl cis-trans isomerase" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 491 (177.9 bits), Expect = 6.9e-47, P = 6.9e-47
 Identities = 90/132 (68%), Positives = 108/132 (81%)

Query:    59 KRRVVPFLLFSSGLFPTLSASGKTKSKNPYDEKRLLEQNKRMQKENSAPEGFPNFIREGF 118
             +R  +  LL S  +    SA GKTKS+NPYDE+RLL+QNK++Q+ N AP+ FPNFIREGF
Sbjct:    63 RRAALALLLASPAMSVAFSAHGKTKSRNPYDERRLLQQNKKIQEANRAPDDFPNFIREGF 122

Query:   119 EVKVVTSENYTKRDSGLIYRDFEVGKGDCPKDGQQVIFHYIGYNESGRRIDSTYLQGSPA 178
             EVKVVTS+NY  RDSGL+Y D +VG G+ PKDGQQVIFHY+GYNESGRRIDSTY+QGSPA
Sbjct:   123 EVKVVTSDNYITRDSGLLYEDIKVGTGNSPKDGQQVIFHYVGYNESGRRIDSTYIQGSPA 182

Query:   179 RIRMGTNALVPG 190
             +IR+G   LVPG
Sbjct:   183 KIRLGNKTLVPG 194

GO:0000413 "protein peptidyl-prolyl isomerization" evidence=ISS

GO:0003755 "peptidyl-prolyl cis-trans isomerase activity" evidence=ISS

GO:0005528 "FK506 binding" evidence=ISS

GO:0016020 "membrane" evidence=ISS

GO:0018208 "peptidyl-proline modification" evidence=ISS

UNIPROTKB|A8HTG4 FKB20-2 "Peptidyl-prolyl cis-trans isomerase" [Chlamydomonas reinhardtii (taxid:3055)]

 Score = 295 (108.9 bits), Expect = 4.0e-26, P = 4.0e-26
 Identities = 55/101 (54%), Positives = 72/101 (71%)

Query:    90 EKRLLEQNKRMQKENSAPEGFPNFIREGFEVKVVTSENYTKRDSGLIYRDFEVGKGDCPK 149
             EK +L  N+R+Q +N  P  FP FIREGF+VKV+  E Y    SGLIY+DFE G G  P 
Sbjct:   106 EKLVLNLNRRIQTQNRVPVDFPGFIREGFDVKVL-GEGYQVAPSGLIYKDFEEGTGPLPV 164

Query:   150 DGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPG 190
             DGQ+V+F+Y GYNESG  ID+++ QG PA+ R+G N ++PG
Sbjct:   165 DGQEVVFNYTGYNESGSVIDTSFRQGRPAQTRLGVNGMIPG 205

GO:0000413 "protein peptidyl-prolyl isomerization" evidence=ISS

GO:0003755 "peptidyl-prolyl cis-trans isomerase activity" evidence=ISS

GO:0005528 "FK506 binding" evidence=ISS

GO:0016020 "membrane" evidence=ISS

GO:0018208 "peptidyl-proline modification" evidence=ISS

UNIPROTKB|Q7NMC5 glr0841 "Peptidyl-prolyl cis-trans isomerase" [Gloeobacter violaceus PCC 7421 (taxid:251221)]

 Score = 122 (48.0 bits), Expect = 8.7e-08, P = 8.7e-08
 Identities = 25/64 (39%), Positives = 35/64 (54%)

Query:   127 NYTKRDSGLIYRDFEVGKGDCPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNA 186
             +YT   SGL Y D  VG G  P+ GQ+V  HY G  E G++ DS+  +G P    +G   
Sbjct:    49 SYTTTTSGLKYLDETVGNGASPQKGQRVTVHYTGTLEDGKKFDSSRDRGQPFSFTIGVGQ 108

Query:   187 LVPG 190
             ++ G
Sbjct:   109 VIQG 112

GO:0000413 "protein peptidyl-prolyl isomerization" evidence=ISS

GO:0003755 "peptidyl-prolyl cis-trans isomerase activity" evidence=ISS

GO:0005528 "FK506 binding" evidence=ISS

GO:0016020 "membrane" evidence=ISS

GO:0018208 "peptidyl-proline modification" evidence=ISS

UNIPROTKB|P45523 fkpA [Escherichia coli K-12 (taxid:83333)]

 Score = 120 (47.3 bits), Expect = 6.4e-06, P = 6.4e-06
 Identities = 30/93 (32%), Positives = 47/93 (50%)

Query:    99 RMQKENSAPEGFPNFIREGFEVKVVTSENYTKRDS-GLIYRDFEVGKGDCPKDGQQVIFH 157
             +M+K+ +  E      RE F       E   K  S GL+Y+  E GKG+ PKD   V+ +
Sbjct:   116 KMEKDAADNEAKGKEYREKF-----AKEKGVKTSSTGLVYQVVEAGKGEAPKDSDTVVVN 170

Query:   158 YIGYNESGRRIDSTYLQGSPARIRMGTNALVPG 190
             Y G    G+  D++Y +G P   R+  + ++PG
Sbjct:   171 YKGTLIDGKEFDNSYTRGEPLSFRL--DGVIPG 201

GO:0005515 "protein binding" evidence=IPI

GO:0042026 "protein refolding" evidence=IDA

GO:0016020 "membrane" evidence=ISS

GO:0005528 "FK506 binding" evidence=ISS

GO:0000413 "protein peptidyl-prolyl isomerization" evidence=IEA;ISS

GO:0042597 "periplasmic space" evidence=IEA

GO:0016853 "isomerase activity" evidence=IEA

GO:0003755 "peptidyl-prolyl cis-trans isomerase activity" evidence=IEA;ISS

UNIPROTKB|Q74AS7 GSU2274 "Peptidyl-prolyl cis-trans isomerase" [Geobacter sulfurreducens PCA (taxid:243231)]

 Score = 109 (43.4 bits), Expect = 1.4e-05, P = 1.4e-05
 Identities = 22/58 (37%), Positives = 31/58 (53%)

Query:   133 SGLIYRDFEVGKGDCPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPG 190
             SGL Y D   G G  P  G+ V  HY G+ E+G + DS+  +G P    +G   ++PG
Sbjct:    49 SGLSYVDLAAGSGAAPVAGKPVKVHYTGWLENGTKFDSSVDRGEPFVFTIGAGEVIPG 106

GO:0000413 "protein peptidyl-prolyl isomerization" evidence=ISS

GO:0003755 "peptidyl-prolyl cis-trans isomerase activity" evidence=ISS

GO:0005528 "FK506 binding" evidence=ISS

GO:0016020 "membrane" evidence=ISS

GO:0018208 "peptidyl-proline modification" evidence=ISS

TIGR_CMR|GSU_2274 GSU_2274 "FKBP-type peptidyl-prolyl cis-trans isomerase" [Geobacter sulfurreducens PCA (taxid:243231)]

 Score = 109 (43.4 bits), Expect = 1.4e-05, P = 1.4e-05
 Identities = 22/58 (37%), Positives = 31/58 (53%)

Query:   133 SGLIYRDFEVGKGDCPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPG 190
             SGL Y D   G G  P  G+ V  HY G+ E+G + DS+  +G P    +G   ++PG
Sbjct:    49 SGLSYVDLAAGSGAAPVAGKPVKVHYTGWLENGTKFDSSVDRGEPFVFTIGAGEVIPG 106

GO:0003755 "peptidyl-prolyl cis-trans isomerase activity" evidence=ISS

GO:0006457 "protein folding" evidence=ISS

UNIPROTKB|A8IW09 FKB16-3 "Peptidyl-prolyl cis-trans isomerase" [Chlamydomonas reinhardtii (taxid:3055)]

 Score = 110 (43.8 bits), Expect = 7.6e-05, P = 7.6e-05
 Identities = 23/58 (39%), Positives = 32/58 (55%)

Query:   133 SGLIYRDFEVGKGDCPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPG 190
             SGL YR+  VG G  P  G QV+ HY+    + R  DS+  +G P  IR+G   ++ G
Sbjct:    92 SGLKYREIAVGNGPTPPVGFQVVVHYVAMTPNLRVFDSSLDKGKPYDIRVGAGQVIKG 149

GO:0000413 "protein peptidyl-prolyl isomerization" evidence=ISS

GO:0003755 "peptidyl-prolyl cis-trans isomerase activity" evidence=ISS

GO:0005528 "FK506 binding" evidence=ISS

GO:0016020 "membrane" evidence=ISS

GO:0018208 "peptidyl-proline modification" evidence=ISS

UNIPROTKB|A9WGZ8 Caur_0860 "Peptidyl-prolyl cis-trans isomerase" [Chloroflexus aurantiacus J-10-fl (taxid:324602)]

 Score = 110 (43.8 bits), Expect = 0.00011, P = 0.00011
 Identities = 22/58 (37%), Positives = 31/58 (53%)

Query:   133 SGLIYRDFEVGKGDCPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPG 190
             SGL Y + + G G+ P+ G  V  HY G    G   DS+Y +G P R  +G   ++PG
Sbjct:     5 SGLQYVEIQAGDGEQPQPGAIVAVHYRGMLADGSVFDSSYERGEPIRFPLGVGMVIPG 62

GO:0000413 "protein peptidyl-prolyl isomerization" evidence=ISS

GO:0003755 "peptidyl-prolyl cis-trans isomerase activity" evidence=ISS

GO:0005528 "FK506 binding" evidence=ISS

GO:0016020 "membrane" evidence=ISS

GO:0018208 "peptidyl-proline modification" evidence=ISS

TAIR|locus:2058218 AT2G43560 "AT2G43560" [Arabidopsis thaliana (taxid:3702)]

 Score = 109 (43.4 bits), Expect = 0.00014, P = 0.00014
 Identities = 27/84 (32%), Positives = 42/84 (50%)

Query:   107 PEGFPNFIREGFEVKVVTSENYTKRDSGLIYRDFEVGKGDCPKDGQQVIFHYIGYNESGR 166
             PE  P       E K + +      +SGL Y+D +VG+G  P  G QV  +Y+    SG+
Sbjct:    81 PEDKPRLCEAECE-KELENVPMVTTESGLQYKDIKVGRGPSPPVGFQVAANYVAMVPSGQ 139

Query:   167 RIDSTYLQGSPARIRMGTNALVPG 190
               DS+  +G P   R+G+  ++ G
Sbjct:   140 IFDSSLEKGLPYLFRVGSGQVIKG 163

GO:0000413 "protein peptidyl-prolyl isomerization" evidence=IBA

GO:0003755 "peptidyl-prolyl cis-trans isomerase activity" evidence=ISS;IBA

GO:0005528 "FK506 binding" evidence=ISS;IBA

GO:0006457 "protein folding" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0009543 "chloroplast thylakoid lumen" evidence=ISS;IDA

GO:0016020 "membrane" evidence=IBA

GO:0018208 "peptidyl-proline modification" evidence=IBA

GO:0031977 "thylakoid lumen" evidence=IDA

GO:0009579 "thylakoid" evidence=IDA

GO:0009534 "chloroplast thylakoid" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0006098 "pentose-phosphate shunt" evidence=RCA

GO:0006364 "rRNA processing" evidence=RCA

GO:0009657 "plastid organization" evidence=RCA

GO:0010027 "thylakoid membrane organization" evidence=RCA

GO:0010207 "photosystem II assembly" evidence=RCA

GO:0015979 "photosynthesis" evidence=RCA

GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=RCA

GO:0019684 "photosynthesis, light reaction" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q0WRJ7	FK202_ARATH	5, ., 2, ., 1, ., 8	0.7077	0.7684	0.6033	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	5.2.1	0.921
4th Layer	5.2.1.8	0.914

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	190
COG0545	205	COG0545, FkpA, FKBP-type peptidyl-prolyl cis-trans	7e-09
pfam00254	94	pfam00254, FKBP_C, FKBP-type peptidyl-prolyl cis-t	4e-06
PRK10902	269	PRK10902, PRK10902, FKBP-type peptidyl-prolyl cis-	2e-05
COG1047	174	COG1047, SlpA, FKBP-type peptidyl-prolyl cis-trans	0.003

>gnl|CDD|223619 COG0545, FkpA, FKBP-type peptidyl-prolyl cis-trans isomerases 1 [Posttranslational modification, protein turnover, chaperones]

 Score = 52.8 bits (127), Expect = 7e-09
 Identities = 31/113 (27%), Positives = 44/113 (38%), Gaps = 11/113 (9%)

Query: 81  KTKSKNPYDEKRLLEQ-NKRMQKENSAPEGFPNFIREGFEVK--VVTSENYTKRDSGLIY 137
                    E+RL +    +  K+ +A         E    +  V T        SGL Y
Sbjct: 52  AALEALQRAEQRLQQAAKAKRAKDAAANAAEGKAFLEKNAKEKGVKTLP------SGLQY 105

Query: 138 RDFEVGKGDCPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPG 190
           +  + G G  PK G  V  HY G    G   DS+Y +G PA   +G   ++PG
Sbjct: 106 KVLKAGDGAAPKKGDTVTVHYTGTLIDGTVFDSSYDRGQPAEFPLG--GVIPG 156

Length = 205

>gnl|CDD|215821 pfam00254, FKBP_C, FKBP-type peptidyl-prolyl cis-trans isomerase

 Score = 43.0 bits (102), Expect = 4e-06
 Identities = 15/45 (33%), Positives = 22/45 (48%)

Query: 146 DCPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPG 190
           +  K G  V  HY G  E G   DS+  +G P    +G+  ++PG
Sbjct: 3   EKAKKGDTVTVHYTGKLEDGTVFDSSKDRGKPFEFTLGSGQVIPG 47

Length = 94

>gnl|CDD|236791 PRK10902, PRK10902, FKBP-type peptidyl-prolyl cis-trans isomerase; Provisional

 Score = 43.6 bits (103), Expect = 2e-05
 Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 10/94 (10%)

Query: 99  RMQKENSAPEGFPNFIREGF--EVKVVTSENYTKRDSGLIYRDFEVGKGDCPKDGQQVIF 156
           +M+K+ +  E      RE F  E  V T+       +GL+Y+  + G G+ PKD   V+ 
Sbjct: 116 KMEKDAADNEAKGKKYREKFAKEKGVKTTS------TGLLYKVEKEGTGEAPKDSDTVVV 169

Query: 157 HYIGYNESGRRIDSTYLQGSPARIRMGTNALVPG 190
           +Y G    G+  D++Y +G P   R+  + ++PG
Sbjct: 170 NYKGTLIDGKEFDNSYTRGEPLSFRL--DGVIPG 201

Length = 269

>gnl|CDD|223976 COG1047, SlpA, FKBP-type peptidyl-prolyl cis-trans isomerases 2 [Posttranslational modification, protein turnover, chaperones]

 Score = 36.5 bits (85), Expect = 0.003
 Identities = 13/42 (30%), Positives = 18/42 (42%)

Query: 149 KDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPG 190
           + G  V  HY    E G  +D+T     P    +G   L+PG
Sbjct: 4   EKGDVVSLHYTLKVEDGEVVDTTDENYGPLTFIVGAGQLIPG 45

Length = 174

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	190
PRK11570	206	peptidyl-prolyl cis-trans isomerase; Provisional	99.9
COG0545	205	FkpA FKBP-type peptidyl-prolyl cis-trans isomerase	99.87
PRK10902	269	FKBP-type peptidyl-prolyl cis-trans isomerase; Pro	99.86
KOG0544	108	consensus FKBP-type peptidyl-prolyl cis-trans isom	99.5
TIGR03516	177	ppisom_GldI peptidyl-prolyl isomerase, gliding mot	99.4
KOG0549	188	consensus FKBP-type peptidyl-prolyl cis-trans isom	99.29
KOG0552	226	consensus FKBP-type peptidyl-prolyl cis-trans isom	99.21
PF01346	124	FKBP_N: Domain amino terminal to FKBP-type peptidy	99.01
PF00254	94	FKBP_C: FKBP-type peptidyl-prolyl cis-trans isomer	98.64
KOG0543	397	consensus FKBP-type peptidyl-prolyl cis-trans isom	97.01
TIGR00115	408	tig trigger factor. Trigger factor is a ribosome-a	95.29
PRK01490	435	tig trigger factor; Provisional	94.94
KOG0545	329	consensus Aryl-hydrocarbon receptor-interacting pr	94.6
COG0544	441	Tig FKBP-type peptidyl-prolyl cis-trans isomerase	92.47

>PRK11570 peptidyl-prolyl cis-trans isomerase; Provisional

Probab=99.90  E-value=1.1e-23  Score=177.12  Aligned_cols=124  Identities=24%  Similarity=0.375  Sum_probs=113.0

Q ss_pred             ccchhhhhHHHHhc--CCCCCcCHHHHHhhhchHHHHHHHHHHHHHHHHcCCCCCChhhHhhccccccccCCCeeecCCc
Q 029631           57 KLKRRVVPFLLFSS--GLFPTLSASGKTKSKNPYDEKRLLEQNKRMQKENSAPEGFPNFIREGFEVKVVTSENYTKRDSG  134 (190)
Q Consensus        57 ~l~~~~~l~~~~a~--g~~~~ls~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~fp~fl~~~~~~k~~~~~gv~~t~sG  134 (190)
                      .|+...|+.++.++  |+.+.|++++++..++.++++.++.++++.+++..++++|   +++|     ++++||+++++|
T Consensus        32 ~~d~~~~~~G~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f---l~~~-----~k~~gv~~t~sG  103 (206)
T PRK11570         32 GLLPEALVAGLADALEGKHPAVPVDVVHRALREIHERADAVRRERQQAMAAEGVKF---LEEN-----AKKEGVNSTESG  103 (206)
T ss_pred             cCCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHh-----hhcCCcEECCCC
Confidence            57889999999886  7888999999999999999887777777777777777666   9999     899999999999


Q ss_pred             cEEEEeecccCCCCCCCCeEEEEEEEEeCCCCEEeccccCCCCeEEEeCCCceecC
Q 029631          135 LIYRDFEVGKGDCPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPG  190 (190)
Q Consensus       135 L~y~vlkeG~G~~p~~gD~V~v~Y~G~l~dGtvFDSS~~~g~P~~f~lG~g~vIpG  190 (190)
                      |+|+++++|+|..|+.+|.|.|||+|+++||++|||||.++.|+.|.+  +++|||
T Consensus       104 l~y~vi~~G~G~~p~~~d~V~v~Y~g~l~dG~vfdss~~~g~P~~f~l--~~vipG  157 (206)
T PRK11570        104 LQFRVLTQGEGAIPARTDRVRVHYTGKLIDGTVFDSSVARGEPAEFPV--NGVIPG  157 (206)
T ss_pred             cEEEEEeCCCCCCCCCCCEEEEEEEEEECCCCEEEeccCCCCCeEEEe--echhhH
Confidence            999999999999999999999999999999999999999999999999  578886

>COG0545 FkpA FKBP-type peptidyl-prolyl cis-trans isomerases 1 [Posttranslational modification, protein turnover, chaperones]

Probab=99.87  E-value=8.6e-22  Score=165.30  Aligned_cols=123  Identities=21%  Similarity=0.397  Sum_probs=97.5

Q ss_pred             cchhhhhHHHHhc-C-CCCCcCHHHHHhhhchHHHHHHHHHHHHHHHHcCCCCCChhhHhhccccccccCCCeeecCCcc
Q 029631           58 LKRRVVPFLLFSS-G-LFPTLSASGKTKSKNPYDEKRLLEQNKRMQKENSAPEGFPNFIREGFEVKVVTSENYTKRDSGL  135 (190)
Q Consensus        58 l~~~~~l~~~~a~-g-~~~~ls~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~fp~fl~~~~~~k~~~~~gv~~t~sGL  135 (190)
                      ++...++.++..+ . +......+..+...+..+.+..+..++.+..|..++..|   +++|     ++..+++++++||
T Consensus        32 ld~~~ll~gi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~f---~~~~-----~k~~~v~~~~sgl  103 (205)
T COG0545          32 LDKDALLAGLEDALALVQKEAALEALQRAEQRLQQAAKAKRAKDAAANAAEGKAF---LEKN-----AKEKGVKTLPSGL  103 (205)
T ss_pred             ccHHHHHHhHHHHHhccchhhhhhHHHHHHHHHHHHHHHHhhhhHHHhHHhHHHH---Hhhh-----cccCCceECCCCc
Confidence            6666677776554 2 212333344444444444555555566666777777666   9998     8899999999999


Q ss_pred             EEEEeecccCCCCCCCCeEEEEEEEEeCCCCEEeccccCCCCeEEEeCCCceecC
Q 029631          136 IYRDFEVGKGDCPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPG  190 (190)
Q Consensus       136 ~y~vlkeG~G~~p~~gD~V~v~Y~G~l~dGtvFDSS~~~g~P~~f~lG~g~vIpG  190 (190)
                      +|++++.|+|..|+.+|+|+|||+|+|.||++|||||+||+|+.|+|  ++||||
T Consensus       104 ~y~~~~~G~G~~~~~~~~V~vhY~G~l~~G~vFDsS~~rg~p~~f~l--~~vI~G  156 (205)
T COG0545         104 QYKVLKAGDGAAPKKGDTVTVHYTGTLIDGTVFDSSYDRGQPAEFPL--GGVIPG  156 (205)
T ss_pred             EEEEEeccCCCCCCCCCEEEEEEEEecCCCCccccccccCCCceeec--CCeeeh
Confidence            99999999999999999999999999999999999999999999999  699998

>PRK10902 FKBP-type peptidyl-prolyl cis-trans isomerase; Provisional

Probab=99.86  E-value=1.8e-21  Score=169.77  Aligned_cols=123  Identities=20%  Similarity=0.405  Sum_probs=108.9

Q ss_pred             ccchhhhhHHHHhc--CCCCCcCHHHHHhhhchHHHHHH----HHHHHHHHHHcCCCCCChhhHhhccccccccCCCeee
Q 029631           57 KLKRRVVPFLLFSS--GLFPTLSASGKTKSKNPYDEKRL----LEQNKRMQKENSAPEGFPNFIREGFEVKVVTSENYTK  130 (190)
Q Consensus        57 ~l~~~~~l~~~~a~--g~~~~ls~~~~~~~~~~~~e~~~----~~~~~~~~~~~~~~~~fp~fl~~~~~~k~~~~~gv~~  130 (190)
                      .|+...|+.++.++  |+ ..|+++++++.++.++++.+    +++++++++|+.++++|   +++|     ++++||++
T Consensus        73 ~~d~~~~~~G~~d~~~~~-~~~~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~f---l~~~-----~k~~gv~~  143 (269)
T PRK10902         73 KLDKDQLIAGVQDAFADK-SKLSDQEIEQTLQAFEARVKSAAQAKMEKDAADNEAKGKKY---REKF-----AKEKGVKT  143 (269)
T ss_pred             CcCHHHHHHHHHHHHcCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHh-----ccCCCcEE
Confidence            48899999999886  55 48999999999999986433    34455677888888777   9999     89999999


Q ss_pred             cCCccEEEEeecccCCCCCCCCeEEEEEEEEeCCCCEEeccccCCCCeEEEeCCCceecC
Q 029631          131 RDSGLIYRDFEVGKGDCPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPG  190 (190)
Q Consensus       131 t~sGL~y~vlkeG~G~~p~~gD~V~v~Y~G~l~dGtvFDSS~~~g~P~~f~lG~g~vIpG  190 (190)
                      +++||+|+|+++|+|..|+.||.|.|||+|++.||++||++|.++.|+.|.+  +++|||
T Consensus       144 t~sGl~y~Vi~~G~G~~p~~gD~V~V~Y~g~l~dG~vfdss~~~g~p~~f~l--~~vipG  201 (269)
T PRK10902        144 TSTGLLYKVEKEGTGEAPKDSDTVVVNYKGTLIDGKEFDNSYTRGEPLSFRL--DGVIPG  201 (269)
T ss_pred             CCCccEEEEEeCCCCCCCCCCCEEEEEEEEEeCCCCEeeccccCCCceEEec--CCcchH
Confidence            9999999999999999999999999999999999999999999999999999  679987

>KOG0544 consensus FKBP-type peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]

Probab=99.50  E-value=5.5e-14  Score=106.08  Aligned_cols=57  Identities=32%  Similarity=0.648  Sum_probs=54.8

Q ss_pred             ccEEEEeecccCC-CCCCCCeEEEEEEEEeCCCCEEeccccCCCCeEEEeCCCceecC
Q 029631          134 GLIYRDFEVGKGD-CPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPG  190 (190)
Q Consensus       134 GL~y~vlkeG~G~-~p~~gD~V~v~Y~G~l~dGtvFDSS~~~g~P~~f~lG~g~vIpG  190 (190)
                      |+..++|..|+|. .|+.||+|++||+|.+.||+.||||.+++.|+.|.+|.++||.|
T Consensus         2 Gv~~~~i~~Gdg~tfpK~Gqtvt~hYtg~L~dG~kfDSs~dr~kPfkf~IGkgeVIkG   59 (108)
T KOG0544|consen    2 GVEKQVISPGDGRTFPKKGQTVTVHYTGTLQDGKKFDSSRDRGKPFKFKIGKGEVIKG   59 (108)
T ss_pred             CceeEEeeCCCCcccCCCCCEEEEEEEeEecCCcEeecccccCCCeeEEecCcceeec
Confidence            7889999999995 79999999999999999999999999999999999999999987

>TIGR03516 ppisom_GldI peptidyl-prolyl isomerase, gliding motility-associated

Probab=99.40  E-value=1e-12  Score=108.39  Aligned_cols=65  Identities=25%  Similarity=0.340  Sum_probs=58.7

Q ss_pred             CCCeeecCCccEEEEeec--ccCCCCCCCCeEEEEEEEEeCCCCEEeccccCCCCeEEEeCCCceecC
Q 029631          125 SENYTKRDSGLIYRDFEV--GKGDCPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPG  190 (190)
Q Consensus       125 ~~gv~~t~sGL~y~vlke--G~G~~p~~gD~V~v~Y~G~l~dGtvFDSS~~~g~P~~f~lG~g~vIpG  190 (190)
                      ...+.++++|++|.++++  |+|..|+.||.|++||++++.||++||++++. .|+.|.+|.+++|||
T Consensus        61 ~~~~~~t~sGl~Y~v~~~~~g~g~~p~~gd~V~v~Y~~~~~dG~v~~ss~~~-~P~~f~vg~~~vi~G  127 (177)
T TIGR03516        61 IVKYETSQNGFWYYYNQKDTGEGTTPEFGDLVTFEYDIRALDGDVIYSEEEL-GPQTYKVDQQDLFSG  127 (177)
T ss_pred             CCCceECCCccEEEEEEecCCCCCcCCCCCEEEEEEEEEeCCCCEEEeCCCC-CCEEEEeCCcchhHH
Confidence            366789999999999976  77789999999999999999999999999974 599999998899986

Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldI is a FKBP-type peptidyl-prolyl cis-trans isomerase (pfam00254) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockout of this gene abolishes the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. This family is only found in Bacteroidetes containing the suite of genes proposed to confer the gliding motility phenotype.

>KOG0549 consensus FKBP-type peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]

Probab=99.29  E-value=8.1e-12  Score=103.76  Aligned_cols=61  Identities=28%  Similarity=0.489  Sum_probs=53.5

Q ss_pred             ecCCccEEEEeecc--cCCCCCCCCeEEEEEEEEeCCCCEEeccccCCCCeEEEeCCCceecC
Q 029631          130 KRDSGLIYRDFEVG--KGDCPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPG  190 (190)
Q Consensus       130 ~t~sGL~y~vlkeG--~G~~p~~gD~V~v~Y~G~l~dGtvFDSS~~~g~P~~f~lG~g~vIpG  190 (190)
                      .+.++|++.++++-  ...+.+.||.|.+||+|.+.||++|||||.+|+|++|.||.++||+|
T Consensus        65 ~~~~~l~I~v~~~p~~C~~kak~GD~l~~HY~g~leDGt~fdSS~~rg~P~~f~LG~gqVIkG  127 (188)
T KOG0549|consen   65 NPDEELQIGVLKKPEECPEKAKKGDTLHVHYTGSLEDGTKFDSSYSRGAPFTFTLGTGQVIKG  127 (188)
T ss_pred             CCCCceeEEEEECCccccccccCCCEEEEEEEEEecCCCEEeeeccCCCCEEEEeCCCceecc
Confidence            34567777777753  45678899999999999999999999999999999999999999998

>KOG0552 consensus FKBP-type peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]

Probab=99.21  E-value=2.9e-11  Score=103.48  Aligned_cols=62  Identities=34%  Similarity=0.674  Sum_probs=58.8

Q ss_pred             eeecCCccEEEEeecccCCCCCCCCeEEEEEEEEeC-CCCEEeccccCCCCeE-EEeCCCceecC
Q 029631          128 YTKRDSGLIYRDFEVGKGDCPKDGQQVIFHYIGYNE-SGRRIDSTYLQGSPAR-IRMGTNALVPG  190 (190)
Q Consensus       128 v~~t~sGL~y~vlkeG~G~~p~~gD~V~v~Y~G~l~-dGtvFDSS~~~g~P~~-f~lG~g~vIpG  190 (190)
                      .+++++||+|+.++.|+|+.+..|+.|.|||.|++. +|++||+++. +.|+. |.+|.++||+|
T Consensus       115 ~~tl~~Gl~y~D~~vG~G~~a~~G~rV~v~Y~Gkl~~~GkvFd~~~~-~kp~~~f~lg~g~VIkG  178 (226)
T KOG0552|consen  115 SRTLPGGLRYEDLRVGSGPSAKKGKRVSVRYIGKLKGNGKVFDSNFG-GKPFKLFRLGSGEVIKG  178 (226)
T ss_pred             ceecCCCcEEEEEEecCCCCCCCCCEEEEEEEEEecCCCeEeecccC-CCCccccccCCCCCCch
Confidence            478999999999999999999999999999999999 9999999997 57999 99999999997

>PF01346 FKBP_N: Domain amino terminal to FKBP-type peptidyl-prolyl isomerase; InterPro: IPR000774 Peptidyl-prolyl cis-trans isomerase (PPIase) catalyses the cis-trans isomerisation of proline imidic peptide bonds in oligopeptides [, ]

Probab=99.01  E-value=3e-10  Score=87.18  Aligned_cols=74  Identities=22%  Similarity=0.322  Sum_probs=58.1

Q ss_pred             cchhhhhHHHHhc--CCCCCcCHHHHHhhhchHHHHHHHHHHHH----HHHHcCCCCCChhhHhhccccccccCCCeeec
Q 029631           58 LKRRVVPFLLFSS--GLFPTLSASGKTKSKNPYDEKRLLEQNKR----MQKENSAPEGFPNFIREGFEVKVVTSENYTKR  131 (190)
Q Consensus        58 l~~~~~l~~~~a~--g~~~~ls~~~~~~~~~~~~e~~~~~~~~~----~~~~~~~~~~fp~fl~~~~~~k~~~~~gv~~t  131 (190)
                      |+...|+.+|.++  ++.+.|+++++++.++.+++++++++++.    +++|+..+++|   |++|     ++++||++|
T Consensus        45 ld~~~~~~Gi~dal~~~~~~l~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~f---la~n-----~k~~GV~~t  116 (124)
T PF01346_consen   45 LDIDAFLAGIRDALAGKKPKLSDEEAQEALQAFQQKMQAKQQEKMAKAAEKNKAEGEAF---LAEN-----AKKEGVKTT  116 (124)
T ss_dssp             --HHHHHHHHHHHHCTT--SS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHH-----HTSTTEEE-
T ss_pred             cCHHHHHHHHHHHHhcCCcCCCHHHHHHHHHHHHHHHHHHhhcchhhhhhhhHHHHHHH---HHHH-----cCCCCCEEC
Confidence            8999999999885  78889999999999999987666555444    88888888766   9999     899999999


Q ss_pred             CCccEEEE
Q 029631          132 DSGLIYRD  139 (190)
Q Consensus       132 ~sGL~y~v  139 (190)
                      +|||+|+|
T Consensus       117 ~SGLqY~V  124 (124)
T PF01346_consen  117 ESGLQYKV  124 (124)
T ss_dssp             TTS-EEEE
T ss_pred             CCCCeeeC
Confidence            99999997

This alpha helical domain is found at the N terminus of proteins belonging to the FKBP-type peptidyl-prolyl cis-trans isomerase(IPR001179 from INTERPRO) family. Peptidyl-prolyl cis-trans isomerase has been shown to accelerate the refolding of several proteins in vitro [, , ]; the FKPB-type enzymes probably act in the folding of extracytoplasmic proteins.; GO: 0006457 protein folding; PDB: 1FD9_A 2VCD_A 3OE2_A 2UZ5_A 3B09_A 1Q6H_B 1Q6I_B 1Q6U_A.

>PF00254 FKBP_C: FKBP-type peptidyl-prolyl cis-trans isomerase; InterPro: IPR001179 Synonym(s): Peptidylprolyl cis-trans isomerase FKBP-type peptidylprolyl isomerases (5

Probab=98.64  E-value=3.7e-08  Score=71.58  Aligned_cols=44  Identities=41%  Similarity=0.881  Sum_probs=41.7

Q ss_pred             CCCCCCeEEEEEEEEeCCCCEEeccccCCCCeEEEeCCCceecC
Q 029631          147 CPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPG  190 (190)
Q Consensus       147 ~p~~gD~V~v~Y~G~l~dGtvFDSS~~~g~P~~f~lG~g~vIpG  190 (190)
                      +|+.||.|.+||.+++.||++|+++|..+.|+.|.+|.+++|||
T Consensus         4 ~~~~gd~V~i~y~~~~~~g~~~~~~~~~~~~~~~~~g~~~~i~g   47 (94)
T PF00254_consen    4 TPKEGDTVTIHYTGRLEDGKVFDSSYQEGEPFEFRLGSGQVIPG   47 (94)
T ss_dssp             SBSTTSEEEEEEEEEETTSEEEEETTTTTSEEEEETTSSSSSHH
T ss_pred             cCCCCCEEEEEEEEEECCCcEEEEeeecCcceeeeeccCccccc
Confidence            59999999999999999999999999989999999999999886

2.1.8 from EC) in vertebrates, are receptors for the two immunosuppressants, FK506 and rapamycin. The drugs inhibit T cell proliferation by arresting two distinct cytoplasmic signal transmission pathways. Peptidylprolyl isomerases accelerate protein folding by catalysing the cis-trans isomerisation of proline imidic peptide bonds in oligopeptides. These proteins are found in a variety of organisms.; GO: 0006457 protein folding; PDB: 1IX5_A 3JXV_A 3JYM_A 1T11_A 1PBK_A 1FD9_A 2VCD_A 3B7X_A 1Q6H_B 1Q6I_B ....

>KOG0543 consensus FKBP-type peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]

Probab=97.01  E-value=0.0013  Score=60.77  Aligned_cols=55  Identities=29%  Similarity=0.414  Sum_probs=45.9

Q ss_pred             CCccEEEEeecccC--CCCCCCCeEEEEEEEEeCCCCEEeccccCCCCeEEEeCC-CceecC
Q 029631          132 DSGLIYRDFEVGKG--DCPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGT-NALVPG  190 (190)
Q Consensus       132 ~sGL~y~vlkeG~G--~~p~~gD~V~v~Y~G~l~dGtvFDSS~~~g~P~~f~lG~-g~vIpG  190 (190)
                      +.+|..+|+++|.|  ..|..|..|+|||.|++.|| +|+++-   ..+.|.+|. ..||.|
T Consensus        83 Dg~iiKriir~G~gd~~~P~~g~~V~v~~~G~~~~~-~f~~~~---~~fe~~~Ge~~~vi~G  140 (397)
T KOG0543|consen   83 DGGIIKRIIREGEGDYSRPNKGAVVKVHLEGELEDG-VFDQRE---LRFEFGEGEDIDVIEG  140 (397)
T ss_pred             CCceEEeeeecCCCCCCCCCCCcEEEEEEEEEECCc-ceeccc---cceEEecCCccchhHH
Confidence            78899999999999  68999999999999999888 788763   458888876 356644

>TIGR00115 tig trigger factor

Probab=95.29  E-value=0.022  Score=51.88  Aligned_cols=42  Identities=17%  Similarity=0.520  Sum_probs=36.4

Q ss_pred             CCCCCCCeEEEEEEEEeCCCCEEeccccCCCCeEEEeCCCceecC
Q 029631          146 DCPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPG  190 (190)
Q Consensus       146 ~~p~~gD~V~v~Y~G~l~dGtvFDSS~~~g~P~~f~lG~g~vIpG  190 (190)
                      ..+..||.|+++|+|+. ||..|+++.  +.++.|.+|.+.+|||
T Consensus       145 ~~~~~gD~V~v~~~~~~-dg~~~~~~~--~~~~~~~lg~~~~~~~  186 (408)
T TIGR00115       145 RAAEKGDRVTIDFEGFI-DGEAFEGGK--AENFSLELGSGQFIPG  186 (408)
T ss_pred             cccCCCCEEEEEEEEEE-CCEECcCCC--CCCeEEEECCCCcchh
Confidence            35788999999999986 999999874  4689999999999886

Trigger factor is a ribosome-associated molecular chaperone and is the first chaperone to interact with nascent polypeptide. Trigger factor can bind at the same time as the signal recognition particle (SRP), but is excluded by the SRP receptor (FtsY). The central domain of trigger factor has peptidyl-prolyl cis/trans isomerase activity. This protein is found in a single copy in virtually every bacterial genome.

>PRK01490 tig trigger factor; Provisional

Probab=94.94  E-value=0.039  Score=50.74  Aligned_cols=42  Identities=17%  Similarity=0.502  Sum_probs=36.3

Q ss_pred             CCCCCCCeEEEEEEEEeCCCCEEeccccCCCCeEEEeCCCceecC
Q 029631          146 DCPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPG  190 (190)
Q Consensus       146 ~~p~~gD~V~v~Y~G~l~dGtvFDSS~~~g~P~~f~lG~g~vIpG  190 (190)
                      ..+..||.|+++|.|+. ||+.|+.+.  +.++.|.+|.+++|||
T Consensus       156 ~~~~~gD~V~vd~~~~~-~g~~~~~~~--~~~~~~~lg~~~~~~~  197 (435)
T PRK01490        156 RPAENGDRVTIDFVGSI-DGEEFEGGK--AEDFSLELGSGRFIPG  197 (435)
T ss_pred             ccCCCCCEEEEEEEEEE-CCEECcCCC--CCceEEEEcCCCcchh
Confidence            35789999999999998 999998864  4689999999999986

>KOG0545 consensus Aryl-hydrocarbon receptor-interacting protein [Posttranslational modification, protein turnover, chaperones]

Probab=94.60  E-value=0.031  Score=49.68  Aligned_cols=54  Identities=30%  Similarity=0.434  Sum_probs=46.6

Q ss_pred             cCCccEEEEeecccCCC--CCCCCeEEEEEEEEeC--CCCEEeccccCCCCeEEEeCC
Q 029631          131 RDSGLIYRDFEVGKGDC--PKDGQQVIFHYIGYNE--SGRRIDSTYLQGSPARIRMGT  184 (190)
Q Consensus       131 t~sGL~y~vlkeG~G~~--p~~gD~V~v~Y~G~l~--dGtvFDSS~~~g~P~~f~lG~  184 (190)
                      ...|++.++|..|+|+-  -.+|..|.+||.....  .++++|.|...|+|..+.+|.
T Consensus         8 ~~~gv~Kril~~G~g~l~e~~dGTrv~FHfrtl~~~e~~tviDDsRk~gkPmeiiiGk   65 (329)
T KOG0545|consen    8 NVEGVKKRILHGGTGELPEFIDGTRVIFHFRTLKCDEERTVIDDSRKVGKPMEIIIGK   65 (329)
T ss_pred             cchhhhHhhccCCCccCccccCCceEEEEEEecccCcccccccchhhcCCCeEEeecc
Confidence            35688999999999985  5589999999998765  488999999999999999974

>COG0544 Tig FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) [Posttranslational modification, protein turnover, chaperones]

Probab=92.47  E-value=0.18  Score=47.40  Aligned_cols=40  Identities=18%  Similarity=0.496  Sum_probs=34.3

Q ss_pred             CCCCCeEEEEEEEEeCCCCEEeccccCCCCeEEEeCCCceecC
Q 029631          148 PKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPG  190 (190)
Q Consensus       148 p~~gD~V~v~Y~G~l~dGtvFDSS~~~g~P~~f~lG~g~vIpG  190 (190)
                      +..||.|+|.|.|+. ||..|...-.  .-+.+.||.+++|||
T Consensus       158 a~~gD~v~IDf~g~i-Dg~~fegg~a--e~~~l~lGs~~fipg  197 (441)
T COG0544         158 AENGDRVTIDFEGSV-DGEEFEGGKA--ENFSLELGSGRFIPG  197 (441)
T ss_pred             cccCCEEEEEEEEEE-cCeeccCccc--cCeEEEEcCCCchhh
Confidence            889999999999954 9999987543  458899999999997

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	190
1q6u_A	245	Crystal Structure Of Fkpa From Escherichia Coli Len		1e-06
1q6h_A	224	Crystal Structure Of A Truncated Form Of Fkpa From		1e-06
1u79_A	129	Crystal Structure Of Atfkbp13 Length = 129		1e-04

>pdb|1Q6U|A Chain A, Crystal Structure Of Fkpa From Escherichia Coli Length = 245

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 10/94 (10%)
Query: 99  RMQKENSAPEGFPNFIREGF--EVKVVTSENYTKRDSGLIYRDFEVGKGDCPKDGQQVIF 156
           +M+K+ +  E      RE F  E  V TS       +GL+Y+  E GKG+ PKD   V+ 
Sbjct: 91  KMEKDAADNEAKGKEYREKFAKEKGVKTSS------TGLVYQVVEAGKGEAPKDSDTVVV 144
Query: 157 HYIGYNESGRRIDSTYLQGSPARIRMGTNALVPG 190
           +Y G    G+  D++Y +G P   R+  + ++PG
Sbjct: 145 NYKGTLIDGKEFDNSYTRGEPLSFRL--DGVIPG 176

>pdb|1Q6H|A Chain A, Crystal Structure Of A Truncated Form Of Fkpa From Escherichia Coli Length = 224

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 133 SGLIYRDFEVGKGDCPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPG 190
           +GL+Y+  E GKG+ PKD   V+ +Y G    G+  D++Y +G P   R+  + ++PG
Sbjct: 121 TGLVYQVVEAGKGEAPKDSDTVVVNYKGTLIDGKEFDNSYTRGEPLSFRL--DGVIPG 176

>pdb|1U79|A Chain A, Crystal Structure Of Atfkbp13 Length = 129

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/67 (35%), Positives = 36/67 (53%)
Query: 124 TSENYTKRDSGLIYRDFEVGKGDCPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMG 183
           TS  ++   SGL + D  VG G     GQ +  HY+G  E+G+  DS+Y +G P   R+G
Sbjct: 3   TSCEFSVSPSGLAFCDKVVGYGPEAVKGQLIKAHYVGKLENGKVFDSSYNRGKPLTFRIG 62
Query: 184 TNALVPG 190
              ++ G
Sbjct: 63  VGEVIKG 69

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	190
1u79_A	129	FKBP-type peptidyl-prolyl CIS-trans isomerase 3; T	1e-12
3uf8_A	209	Ubiquitin-like protein SMT3, peptidyl-prolyl CIS-	2e-12
1q1c_A	280	FK506-binding protein 4; rotamase, TPR repeat, nuc	2e-11
3b7x_A	134	FK506-binding protein 6; isomerase, repeat, rotama	3e-11
2y78_A	133	Peptidyl-prolyl CIS-trans isomerase; MIP, ppiase,	3e-11
2f4e_A	180	ATFKBP42; FKBP-like, alpha-beta, signaling protein	4e-11
1fd9_A	213	Protein (macrophage infectivity potentiator prote;	6e-11
3jxv_A	356	70 kDa peptidyl-prolyl isomerase; FKBP- binding do	7e-11
3jxv_A	356	70 kDa peptidyl-prolyl isomerase; FKBP- binding do	4e-05
1q6h_A	224	FKBP-type peptidyl-prolyl CIS-trans isomerase FKP;	2e-10
3o5q_A	128	Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506	2e-10
1kt0_A	457	FKBP51, 51 kDa FK506-binding protein; FKBP-like pp	3e-10
3o5e_A	144	Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506	4e-10
1yat_A	113	FK506 binding protein; HET: FK5; 2.50A {Saccharomy	1e-09
1r9h_A	135	FKB-6, FK506 binding protein family; structural ge	1e-09
2lgo_A	130	FKBP; infectious disease, isomerase, giardiasis, s	1e-09
1jvw_A	167	Macrophage infectivity potentiator; chagas disease	2e-09
2ppn_A	107	FK506-binding protein 1A; high resolution protein	3e-08
3oe2_A	219	Peptidyl-prolyl CIS-trans isomerase; FKBP, ppiase,	3e-08
2if4_A	338	ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha,	4e-08
2vn1_A	129	70 kDa peptidylprolyl isomerase; FKBP, FK506, TPR	1e-07
3kz7_A	119	FK506-binding protein 3; FKPB ppiase rapamycin, is	2e-07
2pbc_A	102	FK506-binding protein 2; endoplasmic reticulum, is	2e-06
4dt4_A	169	FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer;	5e-06
4dip_A	125	Peptidyl-prolyl CIS-trans isomerase FKBP14; struct	5e-05
2awg_A	118	38 kDa FK-506 binding protein; FKBP-type, ppiase,	7e-05
2d9f_A	135	FK506-binding protein 8 variant; FKBP, rapamycin,	1e-04
2k8i_A	171	SLYD, peptidyl-prolyl CIS-trans isomerase; ppiase,	2e-04
2jwx_A	157	FKBP38NTD, FK506-binding protein 8 variant; apopto	2e-04
2kfw_A	196	FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD	4e-04

>1u79_A FKBP-type peptidyl-prolyl CIS-trans isomerase 3; TFKBP13, FK-506 binding protein; 1.85A {Arabidopsis thaliana} SCOP: d.26.1.1 PDB: 1y0o_A Length = 129

 Score = 61.2 bits (149), Expect = 1e-12
 Identities = 24/67 (35%), Positives = 36/67 (53%)

Query: 124 TSENYTKRDSGLIYRDFEVGKGDCPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMG 183
           TS  ++   SGL + D  VG G     GQ +  HY+G  E+G+  DS+Y +G P   R+G
Sbjct: 3   TSCEFSVSPSGLAFCDKVVGYGPEAVKGQLIKAHYVGKLENGKVFDSSYNRGKPLTFRIG 62

Query: 184 TNALVPG 190
              ++ G
Sbjct: 63  VGEVIKG 69

>3uf8_A Ubiquitin-like protein SMT3, peptidyl-prolyl CIS- isomerase; ssgcid, seattle structural genomics center for in disease; HET: FK5; 1.50A {Burkholderia pseudomallei} PDB: 4ggq_C* 3vaw_A* 3uqa_A* 4g50_A* 4fn2_A* 3uqb_A* 1euv_B 3v60_A 3v61_A 3v62_A* Length = 209

 Score = 62.1 bits (151), Expect = 2e-12
 Identities = 24/111 (21%), Positives = 41/111 (36%), Gaps = 1/111 (0%)

Query: 81  KTKSKNPYDEKRLLEQNKRMQKENSAPEGFPNFIREG-FEVKVVTSENYTKRDSGLIYRD 139
             +     D  R L    R+Q + +  +             + +        +SGL Y D
Sbjct: 51  AKRQGKEMDSLRFLYDGIRIQADQTPEDLDMEDNDIIEAHREQIGGSTVVTTESGLKYED 110

Query: 140 FEVGKGDCPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPG 190
              G G   + GQ V  HY G+   G++ DS+  +  P    +G   ++ G
Sbjct: 111 LTEGSGAEARAGQTVSVHYTGWLTDGQKFDSSKDRNDPFAFVLGGGMVIKG 161

>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A Length = 280

 Score = 59.9 bits (145), Expect = 2e-11
 Identities = 18/109 (16%), Positives = 38/109 (34%), Gaps = 4/109 (3%)

Query: 83  KSKNPYDEKRLLEQNKRMQKENSAPEGFPNFIREGFEVKVVTSENYTKRDSGLIYRDFEV 142
              + +    L+ +   M  E            +   + +   +   K+D G++      
Sbjct: 4   SHHHHHHSSGLVPRGSHMTAEEMKATESGA---QSAPLPMEGVDISPKQDEGVLKVIKRE 60

Query: 143 GKG-DCPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPG 190
           G G + P  G +V  HY G+   G + DS+  +       +G   ++  
Sbjct: 61  GTGTEMPMIGDRVFVHYTGWLLDGTKFDSSLDRKDKFSFDLGKGEVIKA 109

>3b7x_A FK506-binding protein 6; isomerase, repeat, rotamase, TPR repeat, williams-beuren syndrome, structural genomics consortium, SGC; 2.10A {Homo sapiens} Length = 134

 Score = 57.3 bits (139), Expect = 3e-11
 Identities = 19/89 (21%), Positives = 33/89 (37%), Gaps = 7/89 (7%)

Query: 103 ENSAPEGFPNFIREGFEVKVVTSENYTKRDSGLIYRDFEVGKGDCPKDGQQVIFHYIGY- 161
           E     G   + R    +  ++       D G++      G GD       V+  Y GY 
Sbjct: 2   EGDDAPGQSLYERLSQRMLDISG------DRGVLKDVIREGAGDLVAPDASVLVKYSGYL 55

Query: 162 NESGRRIDSTYLQGSPARIRMGTNALVPG 190
               R  DS Y + +P  +++G +  + G
Sbjct: 56  EHMDRPFDSNYFRKTPRLMKLGEDITLWG 84

>2y78_A Peptidyl-prolyl CIS-trans isomerase; MIP, ppiase, virulence; HET: SO4 GOL; 0.91A {Burkholderia pseudomallei} PDB: 2ke0_A 2ko7_A* 2l2s_A* 4dz2_A* 4dz3_A* Length = 133

 Score = 57.2 bits (139), Expect = 3e-11
 Identities = 20/75 (26%), Positives = 31/75 (41%)

Query: 116 EGFEVKVVTSENYTKRDSGLIYRDFEVGKGDCPKDGQQVIFHYIGYNESGRRIDSTYLQG 175
               V   +       +SGL Y D   G G   + GQ V  HY G+   G++ DS+  + 
Sbjct: 11  SSGLVPRGSHMTVVTTESGLKYEDLTEGSGAEARAGQTVSVHYTGWLTDGQKFDSSKDRN 70

Query: 176 SPARIRMGTNALVPG 190
            P    +G   ++ G
Sbjct: 71  DPFAFVLGGGMVIKG 85

>2f4e_A ATFKBP42; FKBP-like, alpha-beta, signaling protein; 2.32A {Arabidopsis thaliana} Length = 180

 Score = 58.3 bits (141), Expect = 4e-11
 Identities = 13/104 (12%), Positives = 31/104 (29%), Gaps = 5/104 (4%)

Query: 90  EKRLLEQNKRMQKENSAPEGFPNFIRE----GFEVKVVTSENYTKRDSGLIYRDFEVGKG 145
           ++ L  Q +   +E+         +         V           D  +  +  + G G
Sbjct: 2   DESLEHQTQTHDQESEIVTEGSAVVHSEPSQEGNVPPKVDSEAEVLDEKVSKQIIKEGHG 61

Query: 146 DCPKDGQQVIFHYIGYNESGRRI-DSTYLQGSPARIRMGTNALV 188
             P        HY  + ++ +   + T+ +  P  + +G     
Sbjct: 62  SKPSKYSTCFLHYRAWTKNSQHKFEDTWHEQQPIELVLGKEKKE 105

>1fd9_A Protein (macrophage infectivity potentiator prote; FKBP domain, long alpha helix, dimerisation VIA helical INTE isomerase; 2.41A {Legionella pneumophila} SCOP: d.26.1.1 PDB: 2uz5_A 2vcd_A* Length = 213

 Score = 58.1 bits (141), Expect = 6e-11
 Identities = 30/103 (29%), Positives = 39/103 (37%), Gaps = 14/103 (13%)

Query: 90  EKRLLEQNKRMQKENSAPEGF--PNFIREGFEVKVVTSENYTKRDSGLIYRDFEVGKGDC 147
            KR  E NK+  +     E F   N  + G    VV         SGL Y+    G G  
Sbjct: 71  AKRTAEFNKKADENKVKGEAFLTENKNKPG----VVVLP------SGLQYKVINSGNGVK 120

Query: 148 PKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPG 190
           P     V   Y G    G   DST   G PA  ++  + ++PG
Sbjct: 121 PGKSDTVTVEYTGRLIDGTVFDSTEKTGKPATFQV--SQVIPG 161

>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A Length = 356

 Score = 59.1 bits (143), Expect = 7e-11
 Identities = 17/68 (25%), Positives = 31/68 (45%), Gaps = 1/68 (1%)

Query: 124 TSENYTKRDSGLIYRDFEVGKG-DCPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRM 182
             E       GL  +  + G+G D P+ G +V  HY G    G++ DS+  +    + ++
Sbjct: 2   VGEENEIGKQGLKKKLLKEGEGWDTPEVGDEVEVHYTGTLLDGKKFDSSRDRDDTFKFKL 61

Query: 183 GTNALVPG 190
           G   ++ G
Sbjct: 62  GQGQVIKG 69

>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A Length = 356

 Score = 42.1 bits (99), Expect = 4e-05
 Identities = 12/77 (15%), Positives = 25/77 (32%), Gaps = 4/77 (5%)

Query: 118 FEVKVV---TSENYTKRDSGLIYRDFEVGKGDCPKDGQQVIFHYIGYNESGRR-IDSTYL 173
            ++++V   T          L     E    + P +G  V     G  + G   +   + 
Sbjct: 227 IDLELVSWKTVTEIGDDKKILKKVLKEXEGYERPNEGAVVTVKITGKLQDGTVFLKKGHD 286

Query: 174 QGSPARIRMGTNALVPG 190
           +  P   +    A++ G
Sbjct: 287 EQEPFEFKTDEEAVIEG 303

>1q6h_A FKBP-type peptidyl-prolyl CIS-trans isomerase FKP; chaperone, peptidyl-prolyl isomerase, heat shock protein, FK family; HET: MSE; 1.97A {Escherichia coli} SCOP: d.26.1.1 PDB: 1q6i_A* 1q6u_A Length = 224

 Score = 57.1 bits (138), Expect = 2e-10
 Identities = 26/104 (25%), Positives = 45/104 (43%), Gaps = 14/104 (13%)

Query: 89  DEKRLLEQNKRMQKENSAPEGF--PNFIREGFEVKVVTSENYTKRDSGLIYRDFEVGKGD 146
                 +  K      +  + +       +G    V TS       +GL+Y+  E GKG+
Sbjct: 85  KSSAQAKMEKDAADNEAKGKEYREKFAKEKG----VKTSS------TGLVYQVVEAGKGE 134

Query: 147 CPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPG 190
            PKD   V+ +Y G    G+  D++Y +G P   R+  + ++PG
Sbjct: 135 APKDSDTVVVNYKGTLIDGKEFDNSYTRGEPLSFRL--DGVIPG 176

>3o5q_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 0.96A {Homo sapiens} PDB: 3o5m_A 3o5l_A 3o5o_A 3o5p_A 3o5r_A* 4drq_A* 3o5j_A 3o5g_A 3o5i_A 3o5k_A Length = 128

 Score = 55.0 bits (133), Expect = 2e-10
 Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 1/74 (1%)

Query: 118 FEVKVVTSENYTKRDSGLIYRDFEVGKGD-CPKDGQQVIFHYIGYNESGRRIDSTYLQGS 176
             V     +  +K+D G++     VG G+  P  G +V  HY G   +G++ DS++ +  
Sbjct: 4   ATVTEQGEDITSKKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSSHDRNE 63

Query: 177 PARIRMGTNALVPG 190
           P    +G   ++  
Sbjct: 64  PFVFSLGKGQVIKA 77

>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A Length = 457

 Score = 57.4 bits (138), Expect = 3e-10
 Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 1/63 (1%)

Query: 129 TKRDSGLIYRDFEVGKGD-CPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNAL 187
           +K+D G++     VG G+  P  G +V  HY G   +G++ DS++ +  P    +G   +
Sbjct: 27  SKKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSSHDRNEPFVFSLGKGQV 86

Query: 188 VPG 190
           +  
Sbjct: 87  IKA 89

>3o5e_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 1.60A {Homo sapiens} PDB: 3o5f_A Length = 144

 Score = 54.6 bits (132), Expect = 4e-10
 Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 1/74 (1%)

Query: 118 FEVKVVTSENYTKRDSGLIYRDFEVGKGD-CPKDGQQVIFHYIGYNESGRRIDSTYLQGS 176
             V     +  +K+D G++     VG G+  P  G +V  HY G   +G++ DS++ +  
Sbjct: 20  ATVAEQGEDITSKKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSSHDRNE 79

Query: 177 PARIRMGTNALVPG 190
           P    +G   ++  
Sbjct: 80  PFVFSLGKGQVIKA 93

>1yat_A FK506 binding protein; HET: FK5; 2.50A {Saccharomyces cerevisiae} SCOP: d.26.1.1 Length = 113

 Score = 52.6 bits (127), Expect = 1e-09
 Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 1/60 (1%)

Query: 132 DSGLIYRDFEVGKG-DCPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPG 190
           +  +       G G   PK G  V  HY G  E+G++ DS+  +GSP +  +G   ++ G
Sbjct: 5   EGNVKIDRISPGDGATFPKTGDLVTIHYTGTLENGQKFDSSVDRGSPFQCNIGVGQVIKG 64

>1r9h_A FKB-6, FK506 binding protein family; structural genomics, peptidylprolyl isomerase, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: d.26.1.1 Length = 135

 Score = 53.1 bits (128), Expect = 1e-09
 Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 1/63 (1%)

Query: 129 TKRDSGLIYRDFEVGKGD-CPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNAL 187
            K+D G++    + G+G   P  G  V  HY+G  E+G + DS+  +G      +G   +
Sbjct: 10  PKKDGGVLKLIKKEGQGVVKPTTGTTVKVHYVGTLENGTKFDSSRDRGDQFSFNLGRGNV 69

Query: 188 VPG 190
           + G
Sbjct: 70  IKG 72

>2lgo_A FKBP; infectious disease, isomerase, giardiasis, ssgcid, structura genomics, seattle structural genomics center for infectious; NMR {Giardia lamblia} Length = 130

 Score = 53.0 bits (128), Expect = 1e-09
 Identities = 16/77 (20%), Positives = 31/77 (40%), Gaps = 1/77 (1%)

Query: 115 REGFEVKVVTSENYTKRDSGLIYRDFEVGKG-DCPKDGQQVIFHYIGYNESGRRIDSTYL 173
                     ++      + L  +    G G   P+ G++V  HY G    G++ DS+  
Sbjct: 6   HHHMGTLEAQTQGPGSMSAQLEKKVLTPGDGVTKPQAGKKVTVHYDGRFPDGKQFDSSRS 65

Query: 174 QGSPARIRMGTNALVPG 190
           +G P +  +G   ++ G
Sbjct: 66  RGKPFQFTLGAGEVIKG 82

>1jvw_A Macrophage infectivity potentiator; chagas disease, X-RAY rotamase, isomeras; 1.70A {Trypanosoma cruzi} SCOP: d.26.1.1 Length = 167

 Score = 53.2 bits (128), Expect = 2e-09
 Identities = 22/97 (22%), Positives = 33/97 (34%), Gaps = 10/97 (10%)

Query: 95  EQNKRMQKENSAPEGFPNFIREGFEVKVVTSENYTKRDSGLIYRDFEVGKGD-CPKDGQQ 153
              +RM        G        F  +     +  K  SGL+++    G G   P    +
Sbjct: 6   SHEERMNNYRKR-VG------RLFMEQKAAQPDAVKLPSGLVFQRIARGSGKRAPAIDDK 58

Query: 154 VIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPG 190
              HY G    G   DS+  +G P   R   N ++ G
Sbjct: 59  CEVHYTGRLRDGTVFDSSRERGKPTTFRP--NEVIKG 93

>2ppn_A FK506-binding protein 1A; high resolution protein structure, isomerase; 0.92A {Homo sapiens} SCOP: d.26.1.1 PDB: 1b6c_A 1a7x_A 1d7h_A 1d7i_A 1d7j_A* 1f40_A* 1fap_A* 1d6o_A* 1fkd_A* 1fkf_A* 1fkg_A* 1fkh_A* 1fki_A* 1fkj_A* 1fkr_A 1fks_A 1fkt_A 1j4h_A* 1j4i_A* 1j4r_A* ... Length = 107

 Score = 48.7 bits (117), Expect = 3e-08
 Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 1/58 (1%)

Query: 134 GLIYRDFEVGKG-DCPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPG 190
           G+       G G   PK GQ  + HY G  E G++ DS+  +  P +  +G   ++ G
Sbjct: 1   GVQVETISPGDGRTFPKRGQTCVVHYTGMLEDGKKFDSSRDRNKPFKFMLGKQEVIRG 58

>3oe2_A Peptidyl-prolyl CIS-trans isomerase; FKBP, ppiase, FK506; HET: TAR SRT; 1.60A {Pseudomonas syringae PV} Length = 219

 Score = 50.9 bits (122), Expect = 3e-08
 Identities = 13/97 (13%), Positives = 29/97 (29%), Gaps = 6/97 (6%)

Query: 95  EQNKRMQKENSAPEGFPNFIR-EGFEVKVVTSENYTKRDSGLIYRDFEVGKGDCPKDGQQ 153
               + +   +             F           +   G++  +   G G  P    +
Sbjct: 78  AAIAQAETAGTDAPTEAALKAERTFMAGEKAKPGVKELADGILMTELTPGTGPKPDANGR 137

Query: 154 VIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPG 190
           V   Y+G    G+  D +     P   R+  ++++ G
Sbjct: 138 VEVRYVGRLPDGKIFDQS---TQPQWFRL--DSVISG 169

>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana} Length = 338

 Score = 50.8 bits (121), Expect = 4e-08
 Identities = 15/96 (15%), Positives = 30/96 (31%), Gaps = 11/96 (11%)

Query: 95  EQNKRMQKENSAPEGFPNFIREGFEVKVVTSENYTKRDSGLIYRDFEVGKGDCPKDGQQV 154
           E +  +  E S     P  +    EV           D  +  +  + G G  P      
Sbjct: 21  EGSAVVHSEPSQEGNVPPKVDSEAEVL----------DEKVSKQIIKEGHGSKPSKYSTC 70

Query: 155 IFHYIGYNESGRR-IDSTYLQGSPARIRMGTNALVP 189
             HY  + ++ +   + T+ +  P  + +G      
Sbjct: 71  FLHYRAWTKNSQHKFEDTWHEQQPIELVLGKEKKEL 106

>2vn1_A 70 kDa peptidylprolyl isomerase; FKBP, FK506, TPR repeat; HET: FK5; 2.35A {Plasmodium falciparum} PDB: 2ofn_A 2ki3_A 3ihz_A* 3ni6_A 3pa7_A Length = 129

 Score = 47.3 bits (113), Expect = 1e-07
 Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 4/63 (6%)

Query: 132 DSGLIYRDFEVGKGDC---PKDGQQVIFHYIGY-NESGRRIDSTYLQGSPARIRMGTNAL 187
           D G+I    + G       PK G +V  HY+G    +G+  DS++ +  P +  +    +
Sbjct: 15  DGGVIKTILKKGDEGEENIPKKGNEVTVHYVGKLESTGKVFDSSFDRNVPFKFHLEQGEV 74

Query: 188 VPG 190
           + G
Sbjct: 75  IKG 77

>3kz7_A FK506-binding protein 3; FKPB ppiase rapamycin, isomerase, nucleus, phosphoprotein, R isomerase-inhibitor complex; HET: RAP; 1.95A {Mus musculus} PDB: 1pbk_A* Length = 119

 Score = 46.9 bits (112), Expect = 2e-07
 Identities = 10/53 (18%), Positives = 15/53 (28%), Gaps = 1/53 (1%)

Query: 130 KRDSGLIYRDFEVGKG-DCPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIR 181
           +          + G   + PK G  V   Y G    G   D+     S  +  
Sbjct: 1   EGPPKYTKSILKKGDKTNFPKKGDVVHCWYTGTLPDGTVFDTNIQTSSKKKKN 53

>2pbc_A FK506-binding protein 2; endoplasmic reticulum, isomerase, polymorphism, rotamase, structural genomics, structural genomics consortium, SGC; 1.80A {Homo sapiens} Length = 102

 Score = 43.7 bits (104), Expect = 2e-06
 Identities = 14/48 (29%), Positives = 20/48 (41%)

Query: 143 GKGDCPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPG 190
           G     + G  +  HY G  E G   DS+  Q  P    +GT  ++ G
Sbjct: 1   GSPIKSRKGDVLHMHYTGKLEDGTEFDSSLPQNQPFVFSLGTGQVIKG 48

>4dt4_A FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer; FKBP domain, IF domain, chaperone, peptidyl-prolyl isomerase isomerase; 1.35A {Escherichia coli} Length = 169

 Score = 43.8 bits (104), Expect = 5e-06
 Identities = 12/42 (28%), Positives = 19/42 (45%)

Query: 149 KDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPG 190
           +    V+ H+    + G   +ST   G PA  R+G  +L  G
Sbjct: 26  QSNSAVLVHFTLKLDDGTTAESTRNNGKPALFRLGDASLSEG 67

>4dip_A Peptidyl-prolyl CIS-trans isomerase FKBP14; structural genomics, structural genomics consortium, SGC, PE prolyl CIS-trans isomerase; 1.82A {Homo sapiens} Length = 125

 Score = 40.0 bits (94), Expect = 5e-05
 Identities = 15/72 (20%), Positives = 23/72 (31%), Gaps = 5/72 (6%)

Query: 124 TSENYTKRDSGLIYRDFEVGK--GDCPKDGQQVIFHYIGYNES-GRRIDSTYLQ--GSPA 178
            S      +  +     +         K G  ++ HY GY E  G    ST+    G P 
Sbjct: 3   QSMGALIPEPEVKIEVLQKPFICHRKTKGGDLMLVHYEGYLEKDGSLFHSTHKHNNGQPI 62

Query: 179 RIRMGTNALVPG 190
              +G    + G
Sbjct: 63  WFTLGILEALKG 74

>2awg_A 38 kDa FK-506 binding protein; FKBP-type, ppiase, BCL-2 inhibitor, SHH signalling antagonist, structural genomics consortium, SGC; 1.60A {Homo sapiens} PDB: 2f2d_A 3ey6_A Length = 118

 Score = 39.5 bits (93), Expect = 7e-05
 Identities = 11/61 (18%), Positives = 18/61 (29%), Gaps = 6/61 (9%)

Query: 132 DSGLIYRDFEVGKGDC--PKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVP 189
           +  L  +    G      P  GQ V  H     E+G R+             +G   ++ 
Sbjct: 12  NGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENGTRVQE----EPELVFTLGDCDVIQ 67

Query: 190 G 190
            
Sbjct: 68  A 68

>2d9f_A FK506-binding protein 8 variant; FKBP, rapamycin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 135

 Score = 39.6 bits (93), Expect = 1e-04
 Identities = 11/61 (18%), Positives = 18/61 (29%), Gaps = 6/61 (9%)

Query: 132 DSGLIYRDFEVGKGDC--PKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVP 189
           +  L  +    G      P  GQ V  H     E+G R+             +G   ++ 
Sbjct: 16  NGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENGTRVQE----EPELVFTLGDCDVIQ 71

Query: 190 G 190
            
Sbjct: 72  A 72

>2k8i_A SLYD, peptidyl-prolyl CIS-trans isomerase; ppiase, chaperone, rotamase; NMR {Escherichia coli} Length = 171

 Score = 39.2 bits (92), Expect = 2e-04
 Identities = 9/42 (21%), Positives = 14/42 (33%), Gaps = 1/42 (2%)

Query: 149 KDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPG 190
                V   Y    E G  +D +    +P     G  +L+ G
Sbjct: 4   AKDLVVSLAYQVRTEDGVLVDESP-VSAPLDYLHGHGSLISG 44

>2jwx_A FKBP38NTD, FK506-binding protein 8 variant; apoptosis, beta barrel, central helix, with flexible N-terminal extension, isomerase; NMR {Homo sapiens} Length = 157

 Score = 39.0 bits (91), Expect = 2e-04
 Identities = 11/61 (18%), Positives = 18/61 (29%), Gaps = 6/61 (9%)

Query: 132 DSGLIYRDFEVGKGD--CPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVP 189
           +  L  +    G      P  GQ V  H     E+G R+             +G   ++ 
Sbjct: 42  NGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENGTRVQE----EPELVFTLGDCDVIQ 97

Query: 190 G 190
            
Sbjct: 98  A 98

>2kfw_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD; protein, cobalt, copper, cytoplasm, metal- binding, nickel, rotamase, zinc; NMR {Escherichia coli} Length = 196

 Score = 38.5 bits (90), Expect = 4e-04
 Identities = 9/42 (21%), Positives = 14/42 (33%), Gaps = 1/42 (2%)

Query: 149 KDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPG 190
                V   Y    E G  +D +    +P     G  +L+ G
Sbjct: 4   AKDLVVSLAYQVRTEDGVLVDESP-VSAPLDYLHGHGSLISG 44

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	190
1fd9_A	213	Protein (macrophage infectivity potentiator prote;	99.87
1q6h_A	224	FKBP-type peptidyl-prolyl CIS-trans isomerase FKP;	99.86
3oe2_A	219	Peptidyl-prolyl CIS-trans isomerase; FKBP, ppiase,	99.84
1jvw_A	167	Macrophage infectivity potentiator; chagas disease	99.68
2lkn_A	165	AH receptor-interacting protein; FKBP-type domain,	99.62
2jwx_A	157	FKBP38NTD, FK506-binding protein 8 variant; apopto	99.55
2y78_A	133	Peptidyl-prolyl CIS-trans isomerase; MIP, ppiase,	99.55
1u79_A	129	FKBP-type peptidyl-prolyl CIS-trans isomerase 3; T	99.54
1yat_A	113	FK506 binding protein; HET: FK5; 2.50A {Saccharomy	99.51
2vn1_A	129	70 kDa peptidylprolyl isomerase; FKBP, FK506, TPR	99.49
2f4e_A	180	ATFKBP42; FKBP-like, alpha-beta, signaling protein	99.48
2lgo_A	130	FKBP; infectious disease, isomerase, giardiasis, s	99.47
3kz7_A	119	FK506-binding protein 3; FKPB ppiase rapamycin, is	99.46
3uf8_A	209	Ubiquitin-like protein SMT3, peptidyl-prolyl CIS-	99.44
4dip_A	125	Peptidyl-prolyl CIS-trans isomerase FKBP14; struct	99.43
3o5e_A	144	Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506	99.42
3o5q_A	128	Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506	99.42
2ppn_A	107	FK506-binding protein 1A; high resolution protein	99.42
1r9h_A	135	FKB-6, FK506 binding protein family; structural ge	99.42
3b7x_A	134	FK506-binding protein 6; isomerase, repeat, rotama	99.39
1q1c_A	280	FK506-binding protein 4; rotamase, TPR repeat, nuc	99.37
2if4_A	338	ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha,	99.33
2d9f_A	135	FK506-binding protein 8 variant; FKBP, rapamycin,	99.28
2awg_A	118	38 kDa FK-506 binding protein; FKBP-type, ppiase,	99.25
1kt0_A	457	FKBP51, 51 kDa FK506-binding protein; FKBP-like pp	99.24
3jxv_A	356	70 kDa peptidyl-prolyl isomerase; FKBP- binding do	99.2
3jxv_A	356	70 kDa peptidyl-prolyl isomerase; FKBP- binding do	99.01
2pbc_A	102	FK506-binding protein 2; endoplasmic reticulum, is	98.94
1p5q_A	336	FKBP52, FK506-binding protein 4; isomerase; 2.80A	98.72
4dt4_A	169	FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer;	98.63
1hxv_A	113	Trigger factor; FKBP fold, ppiase, chaperone; NMR	98.63
1q1c_A	280	FK506-binding protein 4; rotamase, TPR repeat, nuc	98.43
1kt0_A	457	FKBP51, 51 kDa FK506-binding protein; FKBP-like pp	97.75
1w26_A	432	Trigger factor, TF; chaperone, protein folding, ri	97.68
1t11_A	392	Trigger factor, TF; helix-turn-helix, four-helix-b	97.46
3gty_X	433	Trigger factor, TF; chaperone-client complex, cell	85.4
3b09_A	88	Peptidyl-prolyl CIS-trans isomerase; Val-Leu zippe	84.58

>1fd9_A Protein (macrophage infectivity potentiator prote; FKBP domain, long alpha helix, dimerisation VIA helical INTE isomerase; 2.41A {Legionella pneumophila} SCOP: d.26.1.1 PDB: 2uz5_A 2vcd_A*

Probab=99.87  E-value=1.5e-22  Score=169.61  Aligned_cols=124  Identities=22%  Similarity=0.353  Sum_probs=109.5

Q ss_pred             ccchhhhhHHHHhc--CCCCCcCHHHHHhhhchHHHHHHHHH----HHHHHHHcCCCCCChhhHhhccccccccCCCeee
Q 029631           57 KLKRRVVPFLLFSS--GLFPTLSASGKTKSKNPYDEKRLLEQ----NKRMQKENSAPEGFPNFIREGFEVKVVTSENYTK  130 (190)
Q Consensus        57 ~l~~~~~l~~~~a~--g~~~~ls~~~~~~~~~~~~e~~~~~~----~~~~~~~~~~~~~fp~fl~~~~~~k~~~~~gv~~  130 (190)
                      .|+...|+.++.++  |+.+.|+++++++.+++++++.++++    ++.+++|..++++|   +++|     ++++++++
T Consensus        32 ~~~~~~~~~G~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---l~~~-----~~~~~v~~  103 (213)
T 1fd9_A           32 DVNPEAMAKGMQDAMSGAQLALTEQQMKDVLNKFQKDLMAKRTAEFNKKADENKVKGEAF---LTEN-----KNKPGVVV  103 (213)
T ss_dssp             CCCHHHHHHHHHHHHHTCCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHH-----HHSTTEEE
T ss_pred             ccCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHh-----cccCCcEE
Confidence            38899999999886  87789999999999999986655443    34556677777666   9999     88899999


Q ss_pred             cCCccEEEEeecccCCCCCCCCeEEEEEEEEeCCCCEEeccccCCCCeEEEeCCCceecC
Q 029631          131 RDSGLIYRDFEVGKGDCPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPG  190 (190)
Q Consensus       131 t~sGL~y~vlkeG~G~~p~~gD~V~v~Y~G~l~dGtvFDSS~~~g~P~~f~lG~g~vIpG  190 (190)
                      +++||+|+++++|+|..|..||.|+|||+|++.||++||+||.++.|+.|.+  +++|||
T Consensus       104 ~~sGl~y~vl~~G~G~~p~~gD~V~V~Y~g~l~dG~vfdss~~~g~p~~f~l--g~vI~G  161 (213)
T 1fd9_A          104 LPSGLQYKVINSGNGVKPGKSDTVTVEYTGRLIDGTVFDSTEKTGKPATFQV--SQVIPG  161 (213)
T ss_dssp             CTTSCEEEEEECCCSCCCCTTCEEEEEEEEEETTSCEEEEHHHHCSCEEEEG--GGSCHH
T ss_pred             CCCccEEEEEecCCCccCCCCCEEEEEEEEEECCCCEEeeccccCCCEEEEc--CchhhH
Confidence            9999999999999999999999999999999999999999999889999999  689986

>1q6h_A FKBP-type peptidyl-prolyl CIS-trans isomerase FKP; chaperone, peptidyl-prolyl isomerase, heat shock protein, FK family; HET: MSE; 1.97A {Escherichia coli} SCOP: d.26.1.1 PDB: 1q6i_A* 1q6u_A

Probab=99.86  E-value=5.9e-22  Score=167.25  Aligned_cols=123  Identities=21%  Similarity=0.421  Sum_probs=108.3

Q ss_pred             ccchhhhhHHHHhc--CCCCCcCHHHHHhhhchHHHHHHHHH----HHHHHHHcCCCCCChhhHhhccccccccCCCeee
Q 029631           57 KLKRRVVPFLLFSS--GLFPTLSASGKTKSKNPYDEKRLLEQ----NKRMQKENSAPEGFPNFIREGFEVKVVTSENYTK  130 (190)
Q Consensus        57 ~l~~~~~l~~~~a~--g~~~~ls~~~~~~~~~~~~e~~~~~~----~~~~~~~~~~~~~fp~fl~~~~~~k~~~~~gv~~  130 (190)
                      .|+...|+.++.++  |+.. |+++++++.+++++++.++.+    ++.+++|..++.+|   +++|     ...+++++
T Consensus        48 ~~d~~~~~~G~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f---l~~~-----~~~~~v~~  118 (224)
T 1q6h_A           48 KLDKDQLIAGVQDAFADKSK-LSDQEIEQTLQAFEARVKSSAQAKMEKDAADNEAKGKEY---REKF-----AKEKGVKT  118 (224)
T ss_dssp             CCCHHHHHHHHHHHHTTCCS-SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHH-----HHSTTEEE
T ss_pred             ccCHHHHHHHHHHHHcCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH---HHHh-----CcCCCeEE
Confidence            48999999999886  6654 999999999999987655444    35667777777656   9999     78899999


Q ss_pred             cCCccEEEEeecccCCCCCCCCeEEEEEEEEeCCCCEEeccccCCCCeEEEeCCCceecC
Q 029631          131 RDSGLIYRDFEVGKGDCPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPG  190 (190)
Q Consensus       131 t~sGL~y~vlkeG~G~~p~~gD~V~v~Y~G~l~dGtvFDSS~~~g~P~~f~lG~g~vIpG  190 (190)
                      +++||+|+++++|+|..|..||.|+|||+|++.||++||+||.++.|+.|.+  +++|||
T Consensus       119 ~~sGl~y~vl~~G~G~~p~~gD~V~V~Y~g~l~dG~vfdss~~~g~p~~f~l--g~vI~G  176 (224)
T 1q6h_A          119 SSTGLVYQVVEAGKGEAPKDSDTVVVNYKGTLIDGKEFDNSYTRGEPLSFRL--DGVIPG  176 (224)
T ss_dssp             CTTSCEEEEEECCSSCCCCTTCEEEEEEEEEETTSCEEEEGGGGTSCEEEEG--GGSCHH
T ss_pred             CCCceEEEEEecccCccccCCCEEEEEEEEEeCCCCEEeeccccCCCEEEEc--CCcchh
Confidence            9999999999999999999999999999999999999999999899999999  689986

>3oe2_A Peptidyl-prolyl CIS-trans isomerase; FKBP, ppiase, FK506; HET: TAR SRT; 1.60A {Pseudomonas syringae PV} SCOP: d.26.1.0

Probab=99.84  E-value=2.7e-22  Score=169.12  Aligned_cols=120  Identities=16%  Similarity=0.243  Sum_probs=71.8

Q ss_pred             cchhhhhHHHHhc--CCCCCcCHHHHHhhhchHHHHHHHHHHH----HHHHHcCCCCCChhhHhhccccccccCCCeeec
Q 029631           58 LKRRVVPFLLFSS--GLFPTLSASGKTKSKNPYDEKRLLEQNK----RMQKENSAPEGFPNFIREGFEVKVVTSENYTKR  131 (190)
Q Consensus        58 l~~~~~l~~~~a~--g~~~~ls~~~~~~~~~~~~e~~~~~~~~----~~~~~~~~~~~fp~fl~~~~~~k~~~~~gv~~t  131 (190)
                      |+...|+.++.++  |+.+.|+++++++.+++++++.++++++    .+++|++++++|   +++|     ++++|++++
T Consensus        44 ~d~~~~~~G~~d~~~g~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f---l~~n-----~~~~gv~~~  115 (219)
T 3oe2_A           44 LDLKALVDGLKQAYQGKPLALKQERIDQILREHDAAIAQAETAGTDAPTEAALKAERTF---MAGE-----KAKPGVKEL  115 (219)
T ss_dssp             -------------------------------------------CCCCCHHHHHHHHHHH---HHHH-----HTSTTCEEC
T ss_pred             cCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHh-----ccCCCcEEC
Confidence            8899999999886  7778999999999999998765544332    345677777555   9999     889999999


Q ss_pred             CCccEEEEeecccCCCCCCCCeEEEEEEEEeCCCCEEeccccCCCCeEEEeCCCceecC
Q 029631          132 DSGLIYRDFEVGKGDCPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPG  190 (190)
Q Consensus       132 ~sGL~y~vlkeG~G~~p~~gD~V~v~Y~G~l~dGtvFDSS~~~g~P~~f~lG~g~vIpG  190 (190)
                      ++||+|+++++|+|..|..||.|+|||+|++.||++||||   +.|+.|.+  |++|||
T Consensus       116 ~sGl~y~vl~~G~G~~p~~gd~V~V~Y~g~l~dG~vfDss---~~P~~f~l--G~vI~G  169 (219)
T 3oe2_A          116 ADGILMTELTPGTGPKPDANGRVEVRYVGRLPDGKIFDQS---TQPQWFRL--DSVISG  169 (219)
T ss_dssp             GGGCEEEEEECCCSCCCCTTSEEEEEEEEECTTSCEEEEC---SSCEEEEG--GGSCHH
T ss_pred             CCCeEEEEEecCCCccCCCCCEEEEEEEEEECCCCEeecc---CCcEEEEe--cchhHH
Confidence            9999999999999999999999999999999999999999   78999999  489986

>1jvw_A Macrophage infectivity potentiator; chagas disease, X-RAY rotamase, isomeras; 1.70A {Trypanosoma cruzi} SCOP: d.26.1.1

Probab=99.68  E-value=5e-17  Score=131.34  Aligned_cols=72  Identities=26%  Similarity=0.481  Sum_probs=67.3

Q ss_pred             hhHhhccccccccCCCeeecCCccEEEEeecccCCC-CCCCCeEEEEEEEEeCCCCEEeccccCCCCeEEEeCCCceecC
Q 029631          112 NFIREGFEVKVVTSENYTKRDSGLIYRDFEVGKGDC-PKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPG  190 (190)
Q Consensus       112 ~fl~~~~~~k~~~~~gv~~t~sGL~y~vlkeG~G~~-p~~gD~V~v~Y~G~l~dGtvFDSS~~~g~P~~f~lG~g~vIpG  190 (190)
                      +|+++|     +..++++++++||+|+++++|+|.. |..||.|+|||+|++.||++||+|+.++.|+.|.+  +++|||
T Consensus        21 ~~l~~~-----~~~~~~~~~~sGl~~~vl~~G~G~~~~~~gd~V~v~Y~g~l~dG~~fdss~~~g~p~~f~l--g~vI~G   93 (167)
T 1jvw_A           21 LFMEQK-----AAQPDAVKLPSGLVFQRIARGSGKRAPAIDDKCEVHYTGRLRDGTVFDSSRERGKPTTFRP--NEVIKG   93 (167)
T ss_dssp             HHHHHH-----HHSTTEEECTTSCEEEEEECCCCSBCCCTTCCEEEEEEEECTTSCEEEEHHHHTSCEEECG--GGSCHH
T ss_pred             HHHHhc-----ccCCCcEECCCCEEEEEEEcCCCCcCCCCCCEEEEEEEEEECCCCEEeeccccCCCEEEEe--CchhHH
Confidence            348888     7789999999999999999999998 99999999999999999999999998889999999  689986

>2lkn_A AH receptor-interacting protein; FKBP-type domain, immunophilin homolog, protein binding; NMR {Homo sapiens}

Probab=99.62  E-value=2.2e-16  Score=127.81  Aligned_cols=62  Identities=27%  Similarity=0.591  Sum_probs=57.2

Q ss_pred             eecCCccEEEEeecccCCCC--CCCCeEEEEEEEEeCC--CCEEeccccCCCCeEEEeCCCceecC
Q 029631          129 TKRDSGLIYRDFEVGKGDCP--KDGQQVIFHYIGYNES--GRRIDSTYLQGSPARIRMGTNALVPG  190 (190)
Q Consensus       129 ~~t~sGL~y~vlkeG~G~~p--~~gD~V~v~Y~G~l~d--GtvFDSS~~~g~P~~f~lG~g~vIpG  190 (190)
                      ..+++||+|+++++|+|..|  ..||+|+|||+|++.|  |++||||+++|+|+.|.+|.++||+|
T Consensus         6 ~~~~~Gv~~~vl~~G~G~~p~~~~G~~V~vhY~g~l~d~~G~~FDsS~~rg~P~~f~lG~g~vI~G   71 (165)
T 2lkn_A            6 RLREDGIQKRVIQEGRGELPDFQDGTKATFHYRTLHSDDEGTVLDDSRARGKPMELIIGKKFKLPV   71 (165)
T ss_dssp             HHHTTSCCCCEEECCSSCCCCCCTTCEEEEECEEECSSSSCCEEEESTTTTCCEEEESSSSCSCSH
T ss_pred             cccCCCeEEEEEECCcCCCCCCCCCCEEEEEEEEEEeCCCccEEEecccCCCCEEEEecCCCccHH
Confidence            35789999999999999865  5799999999999975  99999999999999999999999997

>2jwx_A FKBP38NTD, FK506-binding protein 8 variant; apoptosis, beta barrel, central helix, with flexible N-terminal extension, isomerase; NMR {Homo sapiens}

Probab=99.55  E-value=1.9e-15  Score=121.02  Aligned_cols=78  Identities=17%  Similarity=0.236  Sum_probs=70.6

Q ss_pred             HHHcCCCCCChhhHhhccccccccCCCee--------ecCCcc-EEEEeecccCC--CCCCCCeEEEEEEEEeCCCCEEe
Q 029631          101 QKENSAPEGFPNFIREGFEVKVVTSENYT--------KRDSGL-IYRDFEVGKGD--CPKDGQQVIFHYIGYNESGRRID  169 (190)
Q Consensus       101 ~~~~~~~~~fp~fl~~~~~~k~~~~~gv~--------~t~sGL-~y~vlkeG~G~--~p~~gD~V~v~Y~G~l~dGtvFD  169 (190)
                      +++.+.+++|   |++|     ++++++.        +++||+ +|+++++|+|.  .|..||.|+|||+|++.||++||
T Consensus        10 ~~~~~~~~~f---l~~~-----~~~~gv~~~~~~~~~~~~sG~v~~~vl~~G~G~~~~p~~gd~V~v~Y~g~l~dG~~fd   81 (157)
T 2jwx_A           10 EQPGALAREF---LAAM-----EPEPAPAPAPEEWLDILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENGTRVQ   81 (157)
T ss_dssp             SSSSSSSCSS---CSCC-----SSCCCCCCCCCSCEESSSSSSEEEEEEECCSTTSCCCCTTEEEEEEEEEECTTSCEEE
T ss_pred             ccchHHHHHH---HHHh-----ccCCCccccccccceECCCCCEEEEEEEccCCCccCCCCCCEEEEEEEEEECCCCEee
Confidence            4566778888   9999     8888888        999998 79999999998  89999999999999999999999


Q ss_pred             ccccCCCCeEEEeCCCceecC
Q 029631          170 STYLQGSPARIRMGTNALVPG  190 (190)
Q Consensus       170 SS~~~g~P~~f~lG~g~vIpG  190 (190)
                      ++    .|+.|.+|.+++|||
T Consensus        82 s~----~p~~f~lG~g~vi~G   98 (157)
T 2jwx_A           82 EE----PELVFTLGDCDVIQA   98 (157)
T ss_dssp             EE----EEEEEETTTTSSCHH
T ss_pred             cC----CCEEEEeCCCChhHH
Confidence            84    799999998899986

>2y78_A Peptidyl-prolyl CIS-trans isomerase; MIP, ppiase, virulence; HET: SO4 GOL; 0.91A {Burkholderia pseudomallei} PDB: 2ke0_A 2ko7_A* 2l2s_A* 4dz2_A* 4dz3_A*

Probab=99.55  E-value=1e-14  Score=113.17  Aligned_cols=68  Identities=28%  Similarity=0.519  Sum_probs=64.2

Q ss_pred             ccCCCeeecCCccEEEEeecccCCCCCCCCeEEEEEEEEeCCCCEEeccccCCCCeEEEeCCCceecC
Q 029631          123 VTSENYTKRDSGLIYRDFEVGKGDCPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPG  190 (190)
Q Consensus       123 ~~~~gv~~t~sGL~y~vlkeG~G~~p~~gD~V~v~Y~G~l~dGtvFDSS~~~g~P~~f~lG~g~vIpG  190 (190)
                      ...+++.++++||+|+++++|+|..|+.||.|+|||+|++.||++||+++++++|+.|.+|.+++|||
T Consensus        18 ~~~~~~~~~~~gl~~~~l~~G~G~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g~vi~G   85 (133)
T 2y78_A           18 GSHMTVVTTESGLKYEDLTEGSGAEARAGQTVSVHYTGWLTDGQKFDSSKDRNDPFAFVLGGGMVIKG   85 (133)
T ss_dssp             TTTTCCEECTTSCEEEEEECCSSCBCCTTSEEEEEEEEEETTSCEEEETTTTTCCEEEETTSSSSCHH
T ss_pred             ccCCCcEECCCCEEEEEEEcCCCCCCCCCCEEEEEEEEEECCCCEEeccCcCCCCEEEEeCCCChhHH
Confidence            45678899999999999999999999999999999999999999999999888999999999999986

>1u79_A FKBP-type peptidyl-prolyl CIS-trans isomerase 3; TFKBP13, FK-506 binding protein; 1.85A {Arabidopsis thaliana} SCOP: d.26.1.1 PDB: 1y0o_A

Probab=99.54  E-value=6.1e-15  Score=113.25  Aligned_cols=66  Identities=35%  Similarity=0.605  Sum_probs=61.7

Q ss_pred             CCCeeecCCccEEEEeecccCCCCCCCCeEEEEEEEEeCCCCEEeccccCCCCeEEEeCCCceecC
Q 029631          125 SENYTKRDSGLIYRDFEVGKGDCPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPG  190 (190)
Q Consensus       125 ~~gv~~t~sGL~y~vlkeG~G~~p~~gD~V~v~Y~G~l~dGtvFDSS~~~g~P~~f~lG~g~vIpG  190 (190)
                      ...++++++||+|+++++|+|..|+.||.|+|||+|++.||++||+|+.++.|+.|.+|.+++|||
T Consensus         4 ~~~~~~~~~Gl~~~~l~~G~G~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~~~~i~G   69 (129)
T 1u79_A            4 SCEFSVSPSGLAFCDKVVGYGPEAVKGQLIKAHYVGKLENGKVFDSSYNRGKPLTFRIGVGEVIKG   69 (129)
T ss_dssp             -CCCEECTTSCEEEEEECCSSCBCCTTCEEEEEEEEECTTSCEEEEHHHHTSCEEEETTSSSSCHH
T ss_pred             CCccEECCCCeEEEEEEcCCCCCCCCCCEEEEEEEEEECCCCEEEecCCCCCCEEEEeCCCCccHH
Confidence            456789999999999999999999999999999999999999999999878999999999999986

>1yat_A FK506 binding protein; HET: FK5; 2.50A {Saccharomyces cerevisiae} SCOP: d.26.1.1

Probab=99.51  E-value=2.5e-14  Score=106.88  Aligned_cols=62  Identities=29%  Similarity=0.546  Sum_probs=58.5

Q ss_pred             eecCCccEEEEeecccCCC-CCCCCeEEEEEEEEeCCCCEEeccccCCCCeEEEeCCCceecC
Q 029631          129 TKRDSGLIYRDFEVGKGDC-PKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPG  190 (190)
Q Consensus       129 ~~t~sGL~y~vlkeG~G~~-p~~gD~V~v~Y~G~l~dGtvFDSS~~~g~P~~f~lG~g~vIpG  190 (190)
                      ..+++|++|+++++|+|.. |..||.|++||++++.||++||++++++.|+.|.+|.+++|||
T Consensus         2 ~~~~~g~~~~~~~~G~g~~~~~~gd~V~v~y~~~~~dG~~~d~s~~~~~p~~f~lG~~~~i~g   64 (113)
T 1yat_A            2 EVIEGNVKIDRISPGDGATFPKTGDLVTIHYTGTLENGQKFDSSVDRGSPFQCNIGVGQVIKG   64 (113)
T ss_dssp             EECGGGCEEEEEECCCSSCCCCTTCEEEEEEEEEETTSCEEEESTTTTCCEEEETTSSSSCHH
T ss_pred             CCCCCCeEEEEEECCCCcccCCCCCEEEEEEEEEECCCCEEEecCCCCCcEEEEeCCCCccHH
Confidence            3678999999999999998 9999999999999999999999999888999999999999986

>2vn1_A 70 kDa peptidylprolyl isomerase; FKBP, FK506, TPR repeat; HET: FK5; 2.35A {Plasmodium falciparum} PDB: 2ofn_A 2ki3_A 3ihz_A* 3ni6_A 3pa7_A

Probab=99.49  E-value=3.3e-14  Score=108.80  Aligned_cols=68  Identities=22%  Similarity=0.451  Sum_probs=59.9

Q ss_pred             ccCCCeeecCCccEE-EEeecc---cCCCCCCCCeEEEEEEEEe-CCCCEEeccccCCCCeEEEeCCCceecC
Q 029631          123 VTSENYTKRDSGLIY-RDFEVG---KGDCPKDGQQVIFHYIGYN-ESGRRIDSTYLQGSPARIRMGTNALVPG  190 (190)
Q Consensus       123 ~~~~gv~~t~sGL~y-~vlkeG---~G~~p~~gD~V~v~Y~G~l-~dGtvFDSS~~~g~P~~f~lG~g~vIpG  190 (190)
                      .+++++..+++|++| +++++|   +|..|..||.|+|||+|++ .||++||+|+.++.|+.|.+|.+++|||
T Consensus         5 ~~~~~~~~~~~g~~~~~il~~G~~g~g~~~~~gd~V~v~Y~g~~~~dG~~fd~s~~~~~p~~f~lG~g~~i~g   77 (129)
T 2vn1_A            5 QEFEKVELTADGGVIKTILKKGDEGEENIPKKGNEVTVHYVGKLESTGKVFDSSFDRNVPFKFHLEQGEVIKG   77 (129)
T ss_dssp             --CEEEECSTTSSEEEEEEECCCCSGGGSCCTTCEEEEEEEEEETTTCCEEEEGGGTTCCEEEETTSSSSCHH
T ss_pred             cccCCcEECCCCCEEEEEEeCCCCCCCCcCCCCCEEEEEEEEEECCCCeEEEecCCCCccEEEEeCCCCcCHH
Confidence            667889999999887 588965   5789999999999999999 7999999999888999999999999986

>2f4e_A ATFKBP42; FKBP-like, alpha-beta, signaling protein; 2.32A {Arabidopsis thaliana}

Probab=99.48  E-value=6.1e-14  Score=114.06  Aligned_cols=68  Identities=16%  Similarity=0.336  Sum_probs=63.2

Q ss_pred             ccCCCeeecCCccEEEEeecccCCCCCCCCeEEEEEEEEeC-CCCEEeccccCCCCeEEEeCCC-ceecC
Q 029631          123 VTSENYTKRDSGLIYRDFEVGKGDCPKDGQQVIFHYIGYNE-SGRRIDSTYLQGSPARIRMGTN-ALVPG  190 (190)
Q Consensus       123 ~~~~gv~~t~sGL~y~vlkeG~G~~p~~gD~V~v~Y~G~l~-dGtvFDSS~~~g~P~~f~lG~g-~vIpG  190 (190)
                      +..++++++++||+|+++++|+|..|..||.|+|||+|++. ||++||+||.++.|+.|.+|.+ ++|||
T Consensus        39 ~~~~~~~~~~~gl~~~vl~~G~G~~~~~Gd~V~v~Y~g~l~~dG~~fdss~~~~~p~~f~lG~g~~vi~G  108 (180)
T 2f4e_A           39 KVDSEAEVLDEKVSKQIIKEGHGSKPSKYSTCFLHYRAWTKNSQHKFEDTWHEQQPIELVLGKEKKELAG  108 (180)
T ss_dssp             CCCSCCEEEETTEEEEEEECCBSCCBCTTCEEEEEEEEEETTTCCEEEETTTTTCCEEEETTSCCGGGHH
T ss_pred             ccCCCcEECCCceEEEEEeCCCCCCCCCCCEEEEEEEEEECCCCcEEeccCccCCCEEEEeCCCCchhHH
Confidence            34577899999999999999999999999999999999998 6999999999899999999988 89986

>2lgo_A FKBP; infectious disease, isomerase, giardiasis, ssgcid, structura genomics, seattle structural genomics center for infectious; NMR {Giardia lamblia}

Probab=99.47  E-value=4.1e-14  Score=109.27  Aligned_cols=66  Identities=23%  Similarity=0.454  Sum_probs=61.8

Q ss_pred             CCCeeecCCccEEE--EeecccCCC-CCCCCeEEEEEEEEeCCCCEEeccccCCCCeEEEeCCCceecC
Q 029631          125 SENYTKRDSGLIYR--DFEVGKGDC-PKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPG  190 (190)
Q Consensus       125 ~~gv~~t~sGL~y~--vlkeG~G~~-p~~gD~V~v~Y~G~l~dGtvFDSS~~~g~P~~f~lG~g~vIpG  190 (190)
                      ...+..+++|++|+  ++++|+|.. |+.||.|+|||+|++.||++||++++++.|+.|.+|.+++|||
T Consensus        14 ~~~~~~~~~Gl~~~K~~l~~G~G~~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g~vi~G   82 (130)
T 2lgo_A           14 AQTQGPGSMSAQLEKKVLTPGDGVTKPQAGKKVTVHYDGRFPDGKQFDSSRSRGKPFQFTLGAGEVIKG   82 (130)
T ss_dssp             CSSCSSSSSSCCCCEEEEECCCSSCCCCTTSEEEEEEEEECTTSCEEECTTTTTCCEEEETTSTTSCHH
T ss_pred             cccceeCCCceEEEEEEEeccCCCccCCCCCEEEEEEEEEECCCCEEEccCcCCCCEEEEeCCCCccHH
Confidence            45678899999999  999999998 9999999999999999999999999988999999999999986

>3kz7_A FK506-binding protein 3; FKPB ppiase rapamycin, isomerase, nucleus, phosphoprotein, R isomerase-inhibitor complex; HET: RAP; 1.95A {Mus musculus} SCOP: d.26.1.1 PDB: 1pbk_A*

Probab=99.46  E-value=1.1e-13  Score=104.07  Aligned_cols=61  Identities=20%  Similarity=0.350  Sum_probs=56.2

Q ss_pred             ecCCccEEEEeecccCC-CCCCCCeEEEEEEEEeCCCCEEeccccC-------CCCeEEEeCCCceecC
Q 029631          130 KRDSGLIYRDFEVGKGD-CPKDGQQVIFHYIGYNESGRRIDSTYLQ-------GSPARIRMGTNALVPG  190 (190)
Q Consensus       130 ~t~sGL~y~vlkeG~G~-~p~~gD~V~v~Y~G~l~dGtvFDSS~~~-------g~P~~f~lG~g~vIpG  190 (190)
                      +.|+||+|+++++|+|. .|+.||.|+|||+|++.||++||+|+..       +.|+.|.+|.+++|||
T Consensus         1 ~~p~g~~~~il~~G~g~~~p~~gd~V~v~Y~g~~~dG~~fdss~~~~~~~~~~~~p~~f~lG~~~~i~G   69 (119)
T 3kz7_A            1 EGPPKYTKSILKKGDKTNFPKKGDVVHCWYTGTLPDGTVFDTNIQTSSKKKKNAKPLSFKVGVGKVIRG   69 (119)
T ss_dssp             CCSCSEEEEEEECCCSSCCCCTTCEEEEEEEEECTTSCEEEECCCCSSSTTTTCCCEEEETTSSSSCHH
T ss_pred             CCCCccEEEEEEcCCCCCcCCCCCEEEEEEEEEECCCCEEEeccccccccccCCCCEEEEECCCChhHH
Confidence            36899999999999996 6999999999999999999999999863       5899999999999986

>3uf8_A Ubiquitin-like protein SMT3, peptidyl-prolyl CIS- isomerase; ssgcid, seattle structural genomics center for in disease; HET: FK5; 1.50A {Burkholderia pseudomallei} PDB: 4ggq_C* 3vaw_A* 3uqa_A* 4g50_A* 4fn2_A* 3uqb_A* 4giv_A* 1euv_B 3v60_A 3v61_A 3v62_A*

Probab=99.44  E-value=1.2e-13  Score=114.72  Aligned_cols=63  Identities=30%  Similarity=0.578  Sum_probs=60.9

Q ss_pred             eeecCCccEEEEeecccCCCCCCCCeEEEEEEEEeCCCCEEeccccCCCCeEEEeCCCceecC
Q 029631          128 YTKRDSGLIYRDFEVGKGDCPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPG  190 (190)
Q Consensus       128 v~~t~sGL~y~vlkeG~G~~p~~gD~V~v~Y~G~l~dGtvFDSS~~~g~P~~f~lG~g~vIpG  190 (190)
                      +.++++||+|+++++|+|..|..||.|+|||+|++.||++||+|++++.|+.|.+|.+++|||
T Consensus        99 ~~~~~sGl~~~vl~~G~G~~~~~gd~V~v~Y~g~l~dG~~fdss~~~~~P~~f~lG~g~vi~G  161 (209)
T 3uf8_A           99 VVTTESGLKYEDLTEGSGAEARAGQTVSVHYTGWLTDGQKFDSSKDRNDPFAFVLGGGMVIKG  161 (209)
T ss_dssp             CEECTTSCEEEEEECCCSCBCCTTCEEEEEEEEEETTSCEEEESGGGTCCEEEETTSSSSCHH
T ss_pred             ccCCCCceEEEEEEcCCCCcCCCCCEEEEEEEEEECCCCEEEEccccCCCEEEEeCCCccchh
Confidence            788999999999999999999999999999999999999999999999999999999999986

>4dip_A Peptidyl-prolyl CIS-trans isomerase FKBP14; structural genomics, structural genomics consortium, SGC, PE prolyl CIS-trans isomerase; 1.82A {Homo sapiens}

Probab=99.43  E-value=1.7e-13  Score=104.21  Aligned_cols=65  Identities=22%  Similarity=0.287  Sum_probs=60.1

Q ss_pred             CCeeecCCccEEEEeeccc--CCCCCCCCeEEEEEEEEeC-CCCEEecccc--CCCCeEEEeCCCceecC
Q 029631          126 ENYTKRDSGLIYRDFEVGK--GDCPKDGQQVIFHYIGYNE-SGRRIDSTYL--QGSPARIRMGTNALVPG  190 (190)
Q Consensus       126 ~gv~~t~sGL~y~vlkeG~--G~~p~~gD~V~v~Y~G~l~-dGtvFDSS~~--~g~P~~f~lG~g~vIpG  190 (190)
                      .++..+++||+|+++++|+  |..|+.||.|.|||+|++. ||++||+|+.  ++.|+.|.+|.+++|||
T Consensus         5 ~~~~~~~~gl~~~~l~~g~~~g~~~~~gd~V~v~Y~g~~~~dG~~fdss~~~~~~~p~~f~lG~~~~i~G   74 (125)
T 4dip_A            5 MGALIPEPEVKIEVLQKPFICHRKTKGGDLMLVHYEGYLEKDGSLFHSTHKHNNGQPIWFTLGILEALKG   74 (125)
T ss_dssp             CGGGCCCCCCEEEEEECCSCCSCCCCTTCEEEEEEEEEETTTCCEEEEHHHHTTTCCEEEETTSCSSCHH
T ss_pred             CceEECCCCeEEEEEEcCCCCCCcCCCCCEEEEEEEEEECCCCcEEEEcccCCCCcCEEEEeCCCChhHH
Confidence            5677889999999999998  8899999999999999999 9999999985  46899999999999986

>3o5e_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 1.60A {Homo sapiens} PDB: 3o5f_A

Probab=99.42  E-value=1.9e-13  Score=107.04  Aligned_cols=61  Identities=28%  Similarity=0.522  Sum_probs=57.7

Q ss_pred             ecCCccEEEEeecccCC-CCCCCCeEEEEEEEEeCCCCEEeccccCCCCeEEEeCCCceecC
Q 029631          130 KRDSGLIYRDFEVGKGD-CPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPG  190 (190)
Q Consensus       130 ~t~sGL~y~vlkeG~G~-~p~~gD~V~v~Y~G~l~dGtvFDSS~~~g~P~~f~lG~g~vIpG  190 (190)
                      ..++||+|+++++|+|. .|..||.|.|||+|++.||++||+|+.++.|+.|.+|.+++|||
T Consensus        32 ~~d~gv~~~i~~~G~G~~~p~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g~~i~G   93 (144)
T 3o5e_A           32 KKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSSHDRNEPFVFSLGKGQVIKA   93 (144)
T ss_dssp             SCSSSEEEEEEECCBSSCCCCTTCEEEEEEEEECTTSCEEEESGGGTSCEEEETTSSSSCHH
T ss_pred             cCCCeEEEEEEECCCCCccCCCCCEEEEEEEEEECCCCEEEeecccCCCeEEEeCCCcccHH
Confidence            46889999999999998 79999999999999999999999999999999999999999986

>3o5q_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 0.96A {Homo sapiens} PDB: 3o5m_A 3o5l_A 3o5o_A 3o5p_A 3o5r_A* 4drk_A* 4drm_A* 4drn_A* 4dro_A* 4drp_A* 4drq_A* 3o5j_A 3o5g_A 3o5i_A 3o5k_A

Probab=99.42  E-value=1.3e-13  Score=105.57  Aligned_cols=62  Identities=27%  Similarity=0.521  Sum_probs=58.1

Q ss_pred             eecCCccEEEEeecccCC-CCCCCCeEEEEEEEEeCCCCEEeccccCCCCeEEEeCCCceecC
Q 029631          129 TKRDSGLIYRDFEVGKGD-CPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPG  190 (190)
Q Consensus       129 ~~t~sGL~y~vlkeG~G~-~p~~gD~V~v~Y~G~l~dGtvFDSS~~~g~P~~f~lG~g~vIpG  190 (190)
                      ..+++||+|+++++|+|. .|..||.|+|||+|++.||++||+|+.++.|+.|.+|.+++|||
T Consensus        15 ~~~d~gv~~~i~~~G~G~~~p~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g~~i~G   77 (128)
T 3o5q_A           15 SKKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSSHDRNEPFVFSLGKGQVIKA   77 (128)
T ss_dssp             SSCSSSEEEEEEECCSSSCCCCTTCEEEEEEEEEETTSCEEEEHHHHTSCEEEETTSSSSCHH
T ss_pred             ccCCCCEEEEEEECCCCCccCCCCCEEEEEEEEEECCCCEEEecCCCCCCEEEEECCCCccHH
Confidence            457889999999999997 69999999999999999999999999888999999999999986

>2ppn_A FK506-binding protein 1A; high resolution protein structure, isomerase; 0.92A {Homo sapiens} SCOP: d.26.1.1 PDB: 1b6c_A 1a7x_A 1d7h_A 1d7i_A 1d7j_A* 1f40_A* 1fap_A* 1d6o_A* 1fkd_A* 1fkf_A* 1fkg_A* 1fkh_A* 1fki_A* 1fkj_A* 1fkr_A 1fks_A 1fkt_A 1j4h_A* 1j4i_A* 1j4r_A* ...

Probab=99.42  E-value=1.4e-13  Score=101.58  Aligned_cols=57  Identities=30%  Similarity=0.629  Sum_probs=54.2

Q ss_pred             ccEEEEeecccCCC-CCCCCeEEEEEEEEeCCCCEEeccccCCCCeEEEeCCCceecC
Q 029631          134 GLIYRDFEVGKGDC-PKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPG  190 (190)
Q Consensus       134 GL~y~vlkeG~G~~-p~~gD~V~v~Y~G~l~dGtvFDSS~~~g~P~~f~lG~g~vIpG  190 (190)
                      ||+|+++++|+|.. |..||.|++||++++.||++||+|+.++.|+.|.+|.+++|||
T Consensus         1 Gl~~~~~~~G~g~~~~~~gd~V~v~y~~~~~dG~~~d~s~~~~~p~~f~lG~~~~i~g   58 (107)
T 2ppn_A            1 GVQVETISPGDGRTFPKRGQTCVVHYTGMLEDGKKFDSSRDRNKPFKFMLGKQEVIRG   58 (107)
T ss_dssp             CEEEEEEECCCSSCCCCTTCEEEEEEEEEETTSCEEEEHHHHTSCEEEETTSCCSCHH
T ss_pred             CcEEEEEECcCCCcCCCCCCEEEEEEEEEECCCCEEEecCCCCCCEEEEeCCCChHHH
Confidence            79999999999987 9999999999999999999999999878899999999999986

>1r9h_A FKB-6, FK506 binding protein family; structural genomics, peptidylprolyl isomerase, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: d.26.1.1

Probab=99.42  E-value=1.5e-13  Score=106.43  Aligned_cols=61  Identities=30%  Similarity=0.536  Sum_probs=57.4

Q ss_pred             ecCCccEEEEeecccCC-CCCCCCeEEEEEEEEeCCCCEEeccccCCCCeEEEeCCCceecC
Q 029631          130 KRDSGLIYRDFEVGKGD-CPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPG  190 (190)
Q Consensus       130 ~t~sGL~y~vlkeG~G~-~p~~gD~V~v~Y~G~l~dGtvFDSS~~~g~P~~f~lG~g~vIpG  190 (190)
                      ++++||+|+++++|+|. .|..||.|+|||+|++.||++||+|+.++.|+.|.+|.+++|||
T Consensus        11 ~~~~gl~~~~l~~G~g~~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~~~vi~G   72 (135)
T 1r9h_A           11 KKDGGVLKLIKKEGQGVVKPTTGTTVKVHYVGTLENGTKFDSSRDRGDQFSFNLGRGNVIKG   72 (135)
T ss_dssp             TCCSSEEEEEEECCBSSCCCCTTCEEEEEEEEEETTSCEEEEHHHHTSCEEEETTTTSSCHH
T ss_pred             CCCCcEEEEEEEccCCCcCCCCCCEEEEEEEEEECCCCEEEecCcCCCCEEEEeCCCCccHH
Confidence            37899999999999997 69999999999999999999999999888999999999999986

>3b7x_A FK506-binding protein 6; isomerase, repeat, rotamase, TPR repeat, williams-beuren syndrome, structural genomics consortium, SGC; 2.10A {Homo sapiens}

Probab=99.39  E-value=1.2e-13  Score=106.93  Aligned_cols=66  Identities=26%  Similarity=0.440  Sum_probs=52.7

Q ss_pred             CCCeeecCCccEEEEeecccCCCCCCCCeEEEEEEEEeC-CCCEEeccccCCCCeEEEeCCCceecC
Q 029631          125 SENYTKRDSGLIYRDFEVGKGDCPKDGQQVIFHYIGYNE-SGRRIDSTYLQGSPARIRMGTNALVPG  190 (190)
Q Consensus       125 ~~gv~~t~sGL~y~vlkeG~G~~p~~gD~V~v~Y~G~l~-dGtvFDSS~~~g~P~~f~lG~g~vIpG  190 (190)
                      +...+++++||+|+++++|+|..+..||.|+|||+|++. ||++||+++.++.|+.|.+|.+++|||
T Consensus        18 ~~~~v~~~~gl~~~vl~~G~g~~~~~gd~V~v~Y~g~l~~~G~~fdss~~~~~p~~f~lG~g~~i~G   84 (134)
T 3b7x_A           18 RMLDISGDRGVLKDVIREGAGDLVAPDASVLVKYSGYLEHMDRPFDSNYFRKTPRLMKLGEDITLWG   84 (134)
T ss_dssp             TCEESSSSSSEEEEEEECCEEEECCTTCEEEEEEEEECTTCSSCSEEC-------CEEC-CCCCCHH
T ss_pred             ccceeeCCCCEEEEEEEcCCCCCCCCCCEEEEEEEEEECCCCeEEEecCCCCCCEEEEcCCcchhHH
Confidence            334466899999999999999999999999999999998 699999999888999999999999986

>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A

Probab=99.37  E-value=6.1e-13  Score=114.76  Aligned_cols=60  Identities=23%  Similarity=0.431  Sum_probs=57.2

Q ss_pred             cCCccEEEEeecccCCC-CCCCCeEEEEEEEEeCCCCEEeccccCCCCeEEEeCCCceecC
Q 029631          131 RDSGLIYRDFEVGKGDC-PKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPG  190 (190)
Q Consensus       131 t~sGL~y~vlkeG~G~~-p~~gD~V~v~Y~G~l~dGtvFDSS~~~g~P~~f~lG~g~vIpG  190 (190)
                      +++||+|+++++|+|.. |..||.|+|||+|++.||++||+|++++.|+.|.+|.+++|||
T Consensus        49 ~~~gl~~~vl~~G~G~~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g~vi~G  109 (280)
T 1q1c_A           49 QDEGVLKVIKREGTGTEMPMIGDRVFVHYTGWLLDGTKFDSSLDRKDKFSFDLGKGEVIKA  109 (280)
T ss_dssp             CSSSEEEEEEECCSSSCCCCTTCEEEEEEEEEETTSCEEEESTTSSSCEEEETTTTSSCHH
T ss_pred             CCCceEEEEEeCCCCCcCCCCCCEEEEEEEEEECCCCEEEecccCCCCEEEEECCcChhHH
Confidence            68899999999999997 9999999999999999999999999888999999999999986

>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}

Probab=99.33  E-value=8.1e-13  Score=113.57  Aligned_cols=66  Identities=15%  Similarity=0.348  Sum_probs=61.4

Q ss_pred             CCCeeecCCccEEEEeecccCCCCCCCCeEEEEEEEEeCC-CCEEeccccCCCCeEEEeCCC-ceecC
Q 029631          125 SENYTKRDSGLIYRDFEVGKGDCPKDGQQVIFHYIGYNES-GRRIDSTYLQGSPARIRMGTN-ALVPG  190 (190)
Q Consensus       125 ~~gv~~t~sGL~y~vlkeG~G~~p~~gD~V~v~Y~G~l~d-GtvFDSS~~~g~P~~f~lG~g-~vIpG  190 (190)
                      ..++.++++||+|+++++|+|..|..||.|+|||+|++.| |++||+||.++.|+.|.+|.+ ++|||
T Consensus        41 ~~~~~~~~~~~~~~~~~~g~g~~~~~gd~v~v~y~g~~~~~g~~fd~~~~~~~~~~~~lg~~~~~i~g  108 (338)
T 2if4_A           41 DSEAEVLDEKVSKQIIKEGHGSKPSKYSTCFLHYRAWTKNSQHKFEDTWHEQQPIELVLGKEKKELAG  108 (338)
T ss_dssp             CSCCEEEETTEEEEEEECCBSCCCCTTCEEEEEEEEEETTTCCCCEEHHHHTCCEEEETTSCCGGGHH
T ss_pred             CcCceeCCCCeEEEEEeCCCCCCCCCCCEEEEEEEEEEcCCCcEeecccCCCCCeEEEcCCCCcccHH
Confidence            4567888999999999999999999999999999999985 999999998889999999988 89986

>2d9f_A FK506-binding protein 8 variant; FKBP, rapamycin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.28  E-value=6.8e-12  Score=97.08  Aligned_cols=62  Identities=21%  Similarity=0.277  Sum_probs=57.0

Q ss_pred             CCCeeecCCc-cEEEEeecccCC--CCCCCCeEEEEEEEEeCCCCEEeccccCCCCeEEEeCCCceecC
Q 029631          125 SENYTKRDSG-LIYRDFEVGKGD--CPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPG  190 (190)
Q Consensus       125 ~~gv~~t~sG-L~y~vlkeG~G~--~p~~gD~V~v~Y~G~l~dGtvFDSS~~~g~P~~f~lG~g~vIpG  190 (190)
                      .+.+..+++| |+|+++++|+|.  .|..||.|+|||+|++.||++||++    .|+.|.+|.+++|||
T Consensus         8 ~~~~~~~~~g~l~~~vl~~G~G~~~~~~~gd~V~v~Y~g~~~dG~~fds~----~p~~f~lG~g~~i~G   72 (135)
T 2d9f_A            8 EEWLDILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENGTRVQEE----PELVFTLGDCDVIQA   72 (135)
T ss_dssp             SSCEESSSSSSSEEEEEECCCSSCCCCCTTSEEEEEEEEEESSSCEEEEE----EEEEEETTSCCSCTT
T ss_pred             ccCcEECCCCCEEEEEEEcCCCCCccCCCCCEEEEEEEEEECCCCEEecC----CCEEEEeCCCChhHH
Confidence            5667888899 999999999998  8999999999999999999999983    799999999999987

>2awg_A 38 kDa FK-506 binding protein; FKBP-type, ppiase, BCL-2 inhibitor, SHH signalling antagonist, structural genomics consortium, SGC; 1.60A {Homo sapiens} PDB: 2f2d_A 3ey6_A

Probab=99.25  E-value=7.2e-12  Score=94.37  Aligned_cols=61  Identities=21%  Similarity=0.280  Sum_probs=55.3

Q ss_pred             CCeeecCCc-cEEEEeecccCC--CCCCCCeEEEEEEEEeCCCCEEeccccCCCCeEEEeCCCceecC
Q 029631          126 ENYTKRDSG-LIYRDFEVGKGD--CPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPG  190 (190)
Q Consensus       126 ~gv~~t~sG-L~y~vlkeG~G~--~p~~gD~V~v~Y~G~l~dGtvFDSS~~~g~P~~f~lG~g~vIpG  190 (190)
                      +.+..+++| ++|+++++|+|.  .|..||.|++||++++.||++||++    .|+.|.+|.+++|||
T Consensus         5 ~~~~~~~~g~~~~~vl~~G~G~~~~~~~gd~V~v~y~g~~~dG~~~ds~----~p~~f~lG~~~~i~g   68 (118)
T 2awg_A            5 EWLDILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENGTRVQEE----PELVFTLGDCDVIQA   68 (118)
T ss_dssp             CEEESSSSSSEEEEEEECCCTTCCCCCTTSEEEEEEEEECTTSCEEEEE----EEEEEETTSSCSCHH
T ss_pred             cceEECCCCCEEEEEEEcCCCCCccCCCCCEEEEEEEEEECCCCEEECC----CCEEEEECCCChhHH
Confidence            446778888 999999999998  8999999999999999999999984    799999999899986

>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A

Probab=99.24  E-value=2.3e-12  Score=115.13  Aligned_cols=61  Identities=28%  Similarity=0.508  Sum_probs=36.1

Q ss_pred             ecCCccEEEEeecccCCC-CCCCCeEEEEEEEEeCCCCEEeccccCCCCeEEEeCCCceecC
Q 029631          130 KRDSGLIYRDFEVGKGDC-PKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPG  190 (190)
Q Consensus       130 ~t~sGL~y~vlkeG~G~~-p~~gD~V~v~Y~G~l~dGtvFDSS~~~g~P~~f~lG~g~vIpG  190 (190)
                      ++++||+|+++++|+|.. |..||.|+|||+|++.||++|||||.++.|+.|.+|.+++|||
T Consensus        28 ~~~~g~~~~~~~~G~g~~~~~~gd~v~v~y~~~~~~g~~~dss~~~~~p~~~~~g~~~~i~g   89 (457)
T 1kt0_A           28 KKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSSHDRNEPFVFSLGKGQVIKA   89 (457)
T ss_dssp             -----CEEEC--------CCCBTCEEEEEEEEEC-----CBC------CEEEETTSTTSCHH
T ss_pred             CCCCcEEEEEEECCCCCCCCCCCCEEEEEEEEEECCCCEEeccCCCCCCeEEEeCCcchhhH
Confidence            468999999999999997 9999999999999999999999999999999999999999986

>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A

Probab=99.20  E-value=1.4e-12  Score=115.05  Aligned_cols=64  Identities=25%  Similarity=0.485  Sum_probs=0.0

Q ss_pred             CeeecCCccEEEEeecccC-CCCCCCCeEEEEEEEEeCCCCEEeccccCCCCeEEEeCCCceecC
Q 029631          127 NYTKRDSGLIYRDFEVGKG-DCPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPG  190 (190)
Q Consensus       127 gv~~t~sGL~y~vlkeG~G-~~p~~gD~V~v~Y~G~l~dGtvFDSS~~~g~P~~f~lG~g~vIpG  190 (190)
                      +...+++||+|+++++|+| ..|..||.|++||+|++.||++||+|+.++.|+.|.+|.+++|||
T Consensus         5 ~~~~~~~Gl~~~i~~~G~G~~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~~~lG~g~~i~g   69 (356)
T 3jxv_A            5 ENEIGKQGLKKKLLKEGEGWDTPEVGDEVEVHYTGTLLDGKKFDSSRDRDDTFKFKLGQGQVIKG   69 (356)
T ss_dssp             -----------------------------------------------------------------
T ss_pred             cceECCCCeEEEEEEeecCCccCCCCCEEEEEEEEEECCCCEEEEcccCCCcEEEEeCCCccchH
Confidence            3456899999999999999 589999999999999999999999999999999999999999997

>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A

Probab=99.01  E-value=4.8e-10  Score=98.89  Aligned_cols=60  Identities=17%  Similarity=0.317  Sum_probs=55.5

Q ss_pred             cCCccEEEEeecccC-CCCCCCCeEEEEEEEEeCCCCEEecc-ccCCCCeEEEeCCCceecC
Q 029631          131 RDSGLIYRDFEVGKG-DCPKDGQQVIFHYIGYNESGRRIDST-YLQGSPARIRMGTNALVPG  190 (190)
Q Consensus       131 t~sGL~y~vlkeG~G-~~p~~gD~V~v~Y~G~l~dGtvFDSS-~~~g~P~~f~lG~g~vIpG  190 (190)
                      .++|++|+++++|+| ..|..||.|+|||+|++.||++||++ +.+++|+.|.+|.+++|||
T Consensus       242 ~d~~~~~~i~~~g~g~~~~~~gd~V~v~y~g~l~dG~~fd~~~~~~~~p~~f~~G~g~~i~G  303 (356)
T 3jxv_A          242 DDKKILKKVLKEXEGYERPNEGAVVTVKITGKLQDGTVFLKKGHDEQEPFEFKTDEEAVIEG  303 (356)
T ss_dssp             TTCCEEEEEEECCBSSCCCCTTCEEEEEEEEEESSSCEEEEESCTTSCCCEEETTTTSSCHH
T ss_pred             cccceeEEeeecccccCCCCCCCEEEEEEEEEECCCCEEeeccccCCcCEEEEECCCccchH
Confidence            357999999999999 68999999999999999999999998 5678999999999999986

>2pbc_A FK506-binding protein 2; endoplasmic reticulum, isomerase, polymorphism, rotamase, structural genomics, structural genomics consortium, SGC; 1.80A {Homo sapiens}

Probab=98.94  E-value=8.7e-10  Score=80.53  Aligned_cols=46  Identities=28%  Similarity=0.477  Sum_probs=43.3

Q ss_pred             CCCCCCCCeEEEEEEEEeCCCCEEeccccCCCCeEEEeCCCceecC
Q 029631          145 GDCPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPG  190 (190)
Q Consensus       145 G~~p~~gD~V~v~Y~G~l~dGtvFDSS~~~g~P~~f~lG~g~vIpG  190 (190)
                      |..++.||.|+|||++++.||++||+||.++.|+.|.+|.+++|||
T Consensus         3 g~~~~~gd~V~v~y~~~~~dG~~~d~s~~~~~p~~f~lG~~~~i~g   48 (102)
T 2pbc_A            3 PIKSRKGDVLHMHYTGKLEDGTEFDSSLPQNQPFVFSLGTGQVIKG   48 (102)
T ss_dssp             CCCCCTTCEEEEEEEEECTTSCEEEESTTTTCCEEEETTSSSSCHH
T ss_pred             CCcCCCCCEEEEEEEEEECCCCEEEeCCCCCCCEEEEeCCCCccHH
Confidence            6789999999999999999999999999888999999999999986

>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A

Probab=98.72  E-value=1.1e-08  Score=87.45  Aligned_cols=55  Identities=25%  Similarity=0.392  Sum_probs=48.0

Q ss_pred             CeeecCCccEEEEeecccCC-CCCCCCeEEEEEEEEeCCCCEEeccccCCCCeEEEeCCCce
Q 029631          127 NYTKRDSGLIYRDFEVGKGD-CPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNAL  187 (190)
Q Consensus       127 gv~~t~sGL~y~vlkeG~G~-~p~~gD~V~v~Y~G~l~dGtvFDSS~~~g~P~~f~lG~g~v  187 (190)
                      ..++.++||+|+++++|+|. .|..||.|+|||+|++ ||++||++     |+.|.+|.|.+
T Consensus        19 ~~~~~~~~~~~~~~~~g~g~~~p~~~~~v~v~y~g~~-~g~~fd~~-----~~~f~lG~g~~   74 (336)
T 1p5q_A           19 SHMEEDGGIIRRIQTRGEGYAKPNEGAIVEVALEGYY-KDKLFDQR-----ELRFEIGEGEN   74 (336)
T ss_dssp             ---CCTTSEEEEEEECCCCSCCCCTTCEEEEEEEEEE-TTEEEEEE-----EEEEETTCGGG
T ss_pred             eeecCCCcEEEEEEeCCCCCCCCCCCCeEEEEEEEEE-CCEEEecC-----CeEEEeCCCCc
Confidence            34567889999999999998 7999999999999999 99999997     89999987753

>4dt4_A FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer; FKBP domain, IF domain, chaperone, peptidyl-prolyl isomerase isomerase; 1.35A {Escherichia coli}

Probab=98.63  E-value=1.4e-08  Score=82.26  Aligned_cols=44  Identities=27%  Similarity=0.451  Sum_probs=41.8

Q ss_pred             CCCCCCeEEEEEEEEeCCCCEEeccccCCCCeEEEeCCCceecC
Q 029631          147 CPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPG  190 (190)
Q Consensus       147 ~p~~gD~V~v~Y~G~l~dGtvFDSS~~~g~P~~f~lG~g~vIpG  190 (190)
                      .++.||.|++||+|++.||++||+||.++.|+.|.+|.+++|||
T Consensus        24 ~i~~gd~V~v~Y~g~l~dG~vfDss~~~~~P~~f~lG~g~vipG   67 (169)
T 4dt4_A           24 SVQSNSAVLVHFTLKLDDGTTAESTRNNGKPALFRLGDASLSEG   67 (169)
T ss_dssp             SCCTTCEEEEEEEEEETTSCEEEEHHHHTSCEEEETTSSSSCHH
T ss_pred             cCCCCCEEEEEEEEEECCCCEEEecCCCCCCEEEEECCCCccHH
Confidence            68999999999999999999999999888999999999999986

>1hxv_A Trigger factor; FKBP fold, ppiase, chaperone; NMR {Mycoplasma genitalium} SCOP: d.26.1.1

Probab=98.63  E-value=2.4e-08  Score=75.38  Aligned_cols=43  Identities=16%  Similarity=0.416  Sum_probs=38.8

Q ss_pred             CCCCCCCCeEEEEEEEEeCCCCEEeccccCCCCeEEEeCCCceecC
Q 029631          145 GDCPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPG  190 (190)
Q Consensus       145 G~~p~~gD~V~v~Y~G~l~dGtvFDSS~~~g~P~~f~lG~g~vIpG  190 (190)
                      +.+++.||.|+|||+|++ ||++||+|+  +.|+.|.+|.+++|||
T Consensus        27 ~~~~~~gD~V~v~Y~g~~-dG~~fdss~--~~p~~f~lG~g~vi~G   69 (113)
T 1hxv_A           27 DKKLANGDIAIIDFTGIV-DNKKLASAS--AQNYELTIGSNSFIKG   69 (113)
T ss_dssp             --CCCSSEEEEEEEEEEE-TTEECSTTC--CSEEEEEETSSCSCTT
T ss_pred             CCCCCCCCEEEEEEEEEE-CCEEcccCC--ccCEEEEECCCChhHH
Confidence            567999999999999999 999999996  6899999999999997

>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A

Probab=98.43  E-value=1.9e-07  Score=80.28  Aligned_cols=54  Identities=30%  Similarity=0.457  Sum_probs=48.5

Q ss_pred             cCCccEEEEeecccCC-CCCCCCeEEEEEEEEeCCCCEEeccccCCCCeEEEeCCCc---eecC
Q 029631          131 RDSGLIYRDFEVGKGD-CPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNA---LVPG  190 (190)
Q Consensus       131 t~sGL~y~vlkeG~G~-~p~~gD~V~v~Y~G~l~dGtvFDSS~~~g~P~~f~lG~g~---vIpG  190 (190)
                      .+.|++|+++++|+|. .|..||.|+|||+|++ ||++||++     |+.|.+|.++   +|||
T Consensus       166 ~d~gl~~~il~~G~G~~~~~~gd~V~i~y~g~~-dG~~fd~~-----~~~f~lG~g~~~~~i~G  223 (280)
T 1q1c_A          166 EDGGIIRRIQTRGEGYAKPNEGAIVEVALEGYY-KDKLFDQR-----ELRFEIGEGENLDLPYG  223 (280)
T ss_dssp             CSSSEEEEEEECCSCSCCCCTTCEEEEEEEEEE-TTEEEEEE-----EEEEETTCGGGGTCCHH
T ss_pred             cccceeEEeeecccccccccCCceEEEEEEEEe-CCEEEecC-----CeEEEecCCcccccchh
Confidence            4678999999999998 6999999999999999 99999983     8999999887   4875

>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A

Probab=97.75  E-value=2.8e-05  Score=69.16  Aligned_cols=49  Identities=31%  Similarity=0.519  Sum_probs=42.7

Q ss_pred             cCCccEEEEeecccCC-CCCCCCeEEEEEEEEeCCCCEEeccccCCCCeEEEeCCC
Q 029631          131 RDSGLIYRDFEVGKGD-CPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTN  185 (190)
Q Consensus       131 t~sGL~y~vlkeG~G~-~p~~gD~V~v~Y~G~l~dGtvFDSS~~~g~P~~f~lG~g  185 (190)
                      .+.++.++++++|.|. .|..||.|+|||+|++ ||++||+.     ++.|.+|.|
T Consensus       144 ~dg~~~k~i~~~g~~~~~p~~g~~V~v~y~g~~-~g~~f~~~-----~~~f~~g~g  193 (457)
T 1kt0_A          144 EDGGIIRRTKRKGEGYSNPNEGATVEIHLEGRC-GGRMFDCR-----DVAFTVGEG  193 (457)
T ss_dssp             SSSSEEEEEEECCBCSCCCCTTCEEEEEEEEEE-TTEEEEEE-----EEEEETTCG
T ss_pred             CCcceEEEEEecCCCCCCCCCCCEEEEEEEEEe-CCeEEecC-----ceEEEeCCC
Confidence            3557899999999985 7999999999999999 99999984     589999865

>1w26_A Trigger factor, TF; chaperone, protein folding, ribosome associated protein, nascent chain, cell division, isomerase; 2.7A {Escherichia coli} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 2vrh_A 1w2b_5

Probab=97.68  E-value=3.2e-05  Score=70.15  Aligned_cols=44  Identities=20%  Similarity=0.420  Sum_probs=40.1

Q ss_pred             cCCCCCCCCeEEEEEEEEeCCCCEEeccccCCCCeEEEeCCCceecC
Q 029631          144 KGDCPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPG  190 (190)
Q Consensus       144 ~G~~p~~gD~V~v~Y~G~l~dGtvFDSS~~~g~P~~f~lG~g~vIpG  190 (190)
                      .+..+..||.|++||+|+. ||+.||+++  +.|+.|.+|.|++|||
T Consensus       154 ~~~~~~~gD~V~i~y~g~~-dG~~fd~~~--~~~~~~~lG~g~~ipg  197 (432)
T 1w26_A          154 KDGAVEAEDRVTIDFTGSV-DGEEFEGGK--ASDFVLAMGQGRMIPG  197 (432)
T ss_dssp             CSSCCCTTCEEEECEEEES-SSCBCSSCC--CSSEEEETTSCCSCTT
T ss_pred             cCCCCCCCCEEEEEEEEee-CCeEccCCC--ccceEEEeCCCCcchH
Confidence            3567999999999999995 999999998  5899999999999997

>1t11_A Trigger factor, TF; helix-turn-helix, four-helix-bundle, ppiase, chaperone; 2.50A {Vibrio cholerae} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 1l1p_A

Probab=97.46  E-value=6e-05  Score=67.58  Aligned_cols=43  Identities=19%  Similarity=0.523  Sum_probs=38.6

Q ss_pred             CCCCCCCCeEEEEEEEEeCCCCEEeccccCCCCeEEEeCCCceecC
Q 029631          145 GDCPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPG  190 (190)
Q Consensus       145 G~~p~~gD~V~v~Y~G~l~dGtvFDSS~~~g~P~~f~lG~g~vIpG  190 (190)
                      +..+..||.|++||+|+. ||+.||++.  +.|+.|.+|.|++|||
T Consensus       158 ~~~~~~gD~V~i~y~g~~-dG~~fd~~~--~~~~~~~lG~g~~ipg  200 (392)
T 1t11_A          158 DEAAENGKRVSIDFVGSI-DGVEFEGGK--AENFPLEMGAGRMIPG  200 (392)
T ss_dssp             SCCCCTTCEEEEEEEEES-SSSCCTTCE--EEEEEEETTSCCBSTT
T ss_pred             CCCCCCCCEEEEEEEEEE-CCEEccCCC--ccceEEEecCCCcchh
Confidence            456899999999999994 999999984  5799999999999997

>3gty_X Trigger factor, TF; chaperone-client complex, cell cycle, cell division, chapero isomerase, rotamase, ribonucleoprotein, binding; 3.40A {Thermotoga maritima} PDB: 3gu0_A

Probab=85.40  E-value=0.49  Score=42.62  Aligned_cols=37  Identities=11%  Similarity=0.012  Sum_probs=29.3

Q ss_pred             CCCCCCeEEEEEEEEeCCCCEEeccccCCCCeEEEeCCCc
Q 029631          147 CPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNA  186 (190)
Q Consensus       147 ~p~~gD~V~v~Y~G~l~dGtvFDSS~~~g~P~~f~lG~g~  186 (190)
                      .+..||.|+++|+|+ .||..|+++.  +.++.+.+|.++
T Consensus       154 ~a~~gD~V~id~~~~-~dG~~~~~~~--~~~~~l~~g~~~  190 (433)
T 3gty_X          154 PAEAGDLVRVNMEVY-NEEGKKLTSR--EYEYVISEDEDR  190 (433)
T ss_dssp             CCCTTSEEEEEEEEE-CTTSCEEEEE--EEEEECCSSCCC
T ss_pred             ccCCCCEEEEEEEEE-ECCEECcCCC--CCCeEEEecCCc
Confidence            577999999999998 5999999864  356777776553

>3b09_A Peptidyl-prolyl CIS-trans isomerase; Val-Leu zipper, helices, chaperone; 1.90A {Shewanella}

Probab=84.58  E-value=0.47  Score=34.01  Aligned_cols=34  Identities=12%  Similarity=-0.024  Sum_probs=29.5

Q ss_pred             ccchhhhhHHHHhc--CCCCCcCHHHHHhhhchHHH
Q 029631           57 KLKRRVVPFLLFSS--GLFPTLSASGKTKSKNPYDE   90 (190)
Q Consensus        57 ~l~~~~~l~~~~a~--g~~~~ls~~~~~~~~~~~~e   90 (190)
                      .|+...|+.++.++  |+.+.|+++++++.+++|++
T Consensus        51 ~lD~dav~~Gl~Dal~Gk~~~ls~eei~~~l~~~~~   86 (88)
T 3b09_A           51 GIDIPAVQAGLADAFAGKESAVSMEELQVAFTEISR   86 (88)
T ss_dssp             TCCHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHC
T ss_pred             ccCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHH
Confidence            38899999999876  88788999999999988874

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	190
d1r9ha_	118	d.26.1.1 (A:) FKB-6, N-terminal domain {Caenorhabd	6e-08
d1q1ca1	120	d.26.1.1 (A:21-140) FKBP52, N-terminal domains {Hu	2e-07
d1kt1a2	111	d.26.1.1 (A:28-138) FKBP51, N-terminal domains {Mo	2e-07
d1u79a_	125	d.26.1.1 (A:) FKBP13 {Thale cress (Arabidopsis tha	3e-07
d1yata_	113	d.26.1.1 (A:) Calcineurin (FKBP12.6) {Baker's yeas	1e-06
d1q6ha_	210	d.26.1.1 (A:) Peptidyl-prolyl cis-trans isomerase	2e-05
d1q1ca2	117	d.26.1.1 (A:141-257) FKBP52, N-terminal domains {H	4e-05
d1kt1a3	115	d.26.1.1 (A:139-253) FKBP51, N-terminal domains {M	1e-04
d1pbka_	116	d.26.1.1 (A:) FKBP25 {Human (Homo sapiens) [TaxId:	0.002
d1ix5a_	151	d.26.1.1 (A:) Archaeal FKBP {Archaeon Methanococcu	0.004

>d1r9ha_ d.26.1.1 (A:) FKB-6, N-terminal domain {Caenorhabditis elegans [TaxId: 6239]} Length = 118

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKB-6, N-terminal domain
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 47.0 bits (111), Expect = 6e-08
 Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 1/57 (1%)

Query: 130 KRDSGLIYRDFEVGKGD-CPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTN 185
           K+D G++    + G+G   P  G  V  HY+G  E+G + DS+  +G      +G  
Sbjct: 7   KKDGGVLKLIKKEGQGVVKPTTGTTVKVHYVGTLENGTKFDSSRDRGDQFSFNLGRG 63

>d1q1ca1 d.26.1.1 (A:21-140) FKBP52, N-terminal domains {Human (Homo sapiens) [TaxId: 9606]} Length = 120

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKBP52, N-terminal domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.5 bits (107), Expect = 2e-07
 Identities = 15/57 (26%), Positives = 25/57 (43%), Gaps = 1/57 (1%)

Query: 130 KRDSGLIYRDFEVGKG-DCPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTN 185
           K+D G++      G G + P  G +V  HY G+   G + DS+  +       +G  
Sbjct: 8   KQDEGVLKVIKREGTGTEMPMIGDRVFVHYTGWLLDGTKFDSSLDRKDKFSFDLGKG 64

>d1kt1a2 d.26.1.1 (A:28-138) FKBP51, N-terminal domains {Monkey (Saimiri boliviensis) [TaxId: 27679]} Length = 111

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKBP51, N-terminal domains
species: Monkey (Saimiri boliviensis) [TaxId: 27679]

 Score = 45.1 bits (106), Expect = 2e-07
 Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 1/61 (1%)

Query: 130 KRDSGLIYRDFEVGKGD-CPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALV 188
           K+D G++     VG G+  P  G +V  HY G   +G++ DS++ +  P    +G   ++
Sbjct: 1   KKDRGVLKIVKRVGHGEETPMIGDRVYVHYNGKLANGKKFDSSHDRNEPFVFSIGKGQVI 60

Query: 189 P 189
            
Sbjct: 61  K 61

>d1u79a_ d.26.1.1 (A:) FKBP13 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 125

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKBP13
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 45.2 bits (106), Expect = 3e-07
 Identities = 21/62 (33%), Positives = 33/62 (53%)

Query: 128 YTKRDSGLIYRDFEVGKGDCPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNAL 187
           ++   SGL + D  VG G     GQ +  HY+G  E+G+  DS+Y +G P   R+G   +
Sbjct: 3   FSVSPSGLAFCDKVVGYGPEAVKGQLIKAHYVGKLENGKVFDSSYNRGKPLTFRIGVGEV 62

Query: 188 VP 189
           + 
Sbjct: 63  IK 64

>d1yata_ d.26.1.1 (A:) Calcineurin (FKBP12.6) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 113

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: Calcineurin (FKBP12.6)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 43.6 bits (102), Expect = 1e-06
 Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%)

Query: 132 DSGLIYRDFEVGKGD-CPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTN 185
           +  +       G G   PK G  V  HY G  E+G++ DS+  +GSP +  +G  
Sbjct: 5   EGNVKIDRISPGDGATFPKTGDLVTIHYTGTLENGQKFDSSVDRGSPFQCNIGVG 59

>d1q6ha_ d.26.1.1 (A:) Peptidyl-prolyl cis-trans isomerase FkpA {Escherichia coli [TaxId: 562]} Length = 210

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: Peptidyl-prolyl cis-trans isomerase FkpA
species: Escherichia coli [TaxId: 562]

 Score = 41.4 bits (96), Expect = 2e-05
 Identities = 22/96 (22%), Positives = 38/96 (39%), Gaps = 8/96 (8%)

Query: 88  YDEKRLLEQNKRMQKENSAPEGFPNFIREGFEVKVVTSENYTKRDSGLIYRDFEVGKGDC 147
                  +  K      +  + +     +   VK           +GL+Y+  E GKG+ 
Sbjct: 70  VKSSAQAKMEKDAADNEAKGKEYREKFAKEKGVK--------TSSTGLVYQVVEAGKGEA 121

Query: 148 PKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMG 183
           PKD   V+ +Y G    G+  D++Y +G P   R+ 
Sbjct: 122 PKDSDTVVVNYKGTLIDGKEFDNSYTRGEPLSFRLD 157

>d1q1ca2 d.26.1.1 (A:141-257) FKBP52, N-terminal domains {Human (Homo sapiens) [TaxId: 9606]} Length = 117

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKBP52, N-terminal domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.4 bits (91), Expect = 4e-05
 Identities = 11/37 (29%), Positives = 16/37 (43%), Gaps = 1/37 (2%)

Query: 130 KRDSGLIYRDFEVGKGD-CPKDGQQVIFHYIGYNESG 165
           + D G+I R    G+G   P +G  V     GY +  
Sbjct: 5   EEDGGIIRRIQTRGEGYAKPNEGAIVEVALEGYYKDK 41

>d1kt1a3 d.26.1.1 (A:139-253) FKBP51, N-terminal domains {Monkey (Saimiri boliviensis) [TaxId: 27679]} Length = 115

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKBP51, N-terminal domains
species: Monkey (Saimiri boliviensis) [TaxId: 27679]

 Score = 37.7 bits (87), Expect = 1e-04
 Identities = 14/60 (23%), Positives = 21/60 (35%), Gaps = 4/60 (6%)

Query: 132 DSGLIYRDFEVGKG-DCPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPG 190
           D G+I R    G+G   P +G +V  H  G     R  D   +  +          +  G
Sbjct: 7   DGGIIRRTKRRGEGYSNPNEGARVQIHLEGRCGG-RVFDCRDVAFTVGEGEDHD--IPIG 63

>d1pbka_ d.26.1.1 (A:) FKBP25 {Human (Homo sapiens) [TaxId: 9606]} Length = 116

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKBP25
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.4 bits (78), Expect = 0.002
 Identities = 9/49 (18%), Positives = 15/49 (30%), Gaps = 1/49 (2%)

Query: 134 GLIYRDFEVGKG-DCPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIR 181
                  + G   + PK G  V   Y G  + G   D+     +  +  
Sbjct: 2   KYTKSVLKKGDKTNFPKKGDVVHCWYTGTLQDGTVFDTNIQTSAKKKKN 50

>d1ix5a_ d.26.1.1 (A:) Archaeal FKBP {Archaeon Methanococcus thermolithotrophicus [TaxId: 2186]} Length = 151

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: Archaeal FKBP
species: Archaeon Methanococcus thermolithotrophicus [TaxId: 2186]

 Score = 34.0 bits (77), Expect = 0.004
 Identities = 8/24 (33%), Positives = 12/24 (50%)

Query: 149 KDGQQVIFHYIGYNESGRRIDSTY 172
             G ++   YIG  ESG   D++ 
Sbjct: 3   DKGVKIKVDYIGKLESGDVFDTSI 26

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	190
d1fd9a_	204	Macrophage infectivity potentiator protein (MIP) {	99.89
d1q6ha_	210	Peptidyl-prolyl cis-trans isomerase FkpA {Escheric	99.88
d1u79a_	125	FKBP13 {Thale cress (Arabidopsis thaliana) [TaxId:	99.6
d1jvwa_	160	Macrophage infectivity potentiator protein (MIP) {	99.6
d1q1ca1	120	FKBP52, N-terminal domains {Human (Homo sapiens) [	99.53
d1r9ha_	118	FKB-6, N-terminal domain {Caenorhabditis elegans [	99.48
d2ppna1	107	FK-506 binding protein (FKBP12), an immunophilin {	99.46
d1kt1a2	111	FKBP51, N-terminal domains {Monkey (Saimiri bolivi	99.46
d1yata_	113	Calcineurin (FKBP12.6) {Baker's yeast (Saccharomyc	99.46
d1pbka_	116	FKBP25 {Human (Homo sapiens) [TaxId: 9606]}	99.32
d1kt1a3	115	FKBP51, N-terminal domains {Monkey (Saimiri bolivi	98.69
d1q1ca2	117	FKBP52, N-terminal domains {Human (Homo sapiens) [	98.51
d1hxva_	85	Trigger factor PPIase domain {Mycoplasma genitaliu	97.77
d1t11a3	113	Trigger factor PPIase domain {Vibrio cholerae [Tax	95.48
d1l1pa_	106	Trigger factor PPIase domain {Escherichia coli [Ta	95.06

>d1fd9a_ d.26.1.1 (A:) Macrophage infectivity potentiator protein (MIP) {Legionella pneumophila [TaxId: 446]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: Macrophage infectivity potentiator protein (MIP)
species: Legionella pneumophila [TaxId: 446]

Probab=99.89  E-value=1.2e-23  Score=172.21  Aligned_cols=124  Identities=23%  Similarity=0.348  Sum_probs=108.8

Q ss_pred             ccchhhhhHHHHhc--CCCCCcCHHHHHhhhchHHHHHH----HHHHHHHHHHcCCCCCChhhHhhccccccccCCCeee
Q 029631           57 KLKRRVVPFLLFSS--GLFPTLSASGKTKSKNPYDEKRL----LEQNKRMQKENSAPEGFPNFIREGFEVKVVTSENYTK  130 (190)
Q Consensus        57 ~l~~~~~l~~~~a~--g~~~~ls~~~~~~~~~~~~e~~~----~~~~~~~~~~~~~~~~fp~fl~~~~~~k~~~~~gv~~  130 (190)
                      .|+..+|+.++.++  |+.+.|+++++++.+++++++.+    ++.+++.++|..++.+|   +++|     ++.+++++
T Consensus        24 eld~e~~~~Gl~Da~~g~~~~ls~ee~~~~l~~~~~~~~~~~~~~~~~~~~~n~~~~~~f---l~~~-----~~~~~v~~   95 (204)
T d1fd9a_          24 DVNPEAMAKGMQDAMSGAQLALTEQQMKDVLNKFQKDLMAKRTAEFNKKADENKVKGEAF---LTEN-----KNKPGVVV   95 (204)
T ss_dssp             CCCHHHHHHHHHHHHHTCCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHH-----HHSTTEEE
T ss_pred             ccCHHHHHHHHHHHhcCCcccCCHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHH---HHhc-----ccCCceEE
Confidence            57889999999876  88889999999999999885443    33445666777777655   9999     78899999


Q ss_pred             cCCccEEEEeecccCCCCCCCCeEEEEEEEEeCCCCEEeccccCCCCeEEEeCCCceecC
Q 029631          131 RDSGLIYRDFEVGKGDCPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPG  190 (190)
Q Consensus       131 t~sGL~y~vlkeG~G~~p~~gD~V~v~Y~G~l~dGtvFDSS~~~g~P~~f~lG~g~vIpG  190 (190)
                      ++|||+|+++++|+|..|..||.|.|||+|+++||++||+|+.++.|+.|.+  +++|||
T Consensus        96 ~~sGl~y~v~~~G~G~~p~~~d~v~v~y~g~l~dg~~f~~s~~~~~p~~~~~--~~~i~G  153 (204)
T d1fd9a_          96 LPSGLQYKVINSGNGVKPGKSDTVTVEYTGRLIDGTVFDSTEKTGKPATFQV--SQVIPG  153 (204)
T ss_dssp             CTTSCEEEEEECCCSCCCCTTCEEEEEEEEEETTSCEEEEHHHHCSCEEEEG--GGSCHH
T ss_pred             ecCccEEEEeecCCCcccCCCCEEEEEEEEEECCCCEecccccCCCCceecC--Cccchh
Confidence            9999999999999999999999999999999999999999999999999999  689986

>d1q6ha_ d.26.1.1 (A:) Peptidyl-prolyl cis-trans isomerase FkpA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: Peptidyl-prolyl cis-trans isomerase FkpA
species: Escherichia coli [TaxId: 562]

Probab=99.88  E-value=3e-23  Score=170.53  Aligned_cols=125  Identities=21%  Similarity=0.424  Sum_probs=107.3

Q ss_pred             cccchhhhhHHHHhc-CCCCCcCHHHHHhhhchHHHHH----HHHHHHHHHHHcCCCCCChhhHhhccccccccCCCeee
Q 029631           56 VKLKRRVVPFLLFSS-GLFPTLSASGKTKSKNPYDEKR----LLEQNKRMQKENSAPEGFPNFIREGFEVKVVTSENYTK  130 (190)
Q Consensus        56 ~~l~~~~~l~~~~a~-g~~~~ls~~~~~~~~~~~~e~~----~~~~~~~~~~~~~~~~~fp~fl~~~~~~k~~~~~gv~~  130 (190)
                      -.|+..+|+.++.++ .....++++++++.++++++..    +++.++.+++|..++++|   ++++     ++++++++
T Consensus        33 ~~ld~~~~~~Gl~Dal~gk~~l~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---l~~~-----~~~~~v~~  104 (210)
T d1q6ha_          33 IKLDKDQLIAGVQDAFADKSKLSDQEIEQTLQAFEARVKSSAQAKMEKDAADNEAKGKEY---REKF-----AKEKGVKT  104 (210)
T ss_dssp             CCCCHHHHHHHHHHHHTTCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHH-----HHSTTEEE
T ss_pred             cCcCHHHHHHHHHHHHcCCCcCchhHHHHHHHHHHHHHHHHHhhhhHHHHHHhhhhHHHH---HHhh-----cccCceEE
Confidence            368899999999875 3346899999999998887543    334455566777777655   9998     88899999


Q ss_pred             cCCccEEEEeecccCCCCCCCCeEEEEEEEEeCCCCEEeccccCCCCeEEEeCCCceecC
Q 029631          131 RDSGLIYRDFEVGKGDCPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPG  190 (190)
Q Consensus       131 t~sGL~y~vlkeG~G~~p~~gD~V~v~Y~G~l~dGtvFDSS~~~g~P~~f~lG~g~vIpG  190 (190)
                      +++||+|+++++|+|+.|..||.|.|||+|+++||++||+|+.++.|+.|.+  +++|||
T Consensus       105 ~~sGl~y~v~~~G~G~~p~~gd~v~v~y~g~l~dG~~fd~s~~~~~p~~~~~--~~vi~g  162 (210)
T d1q6ha_         105 SSTGLVYQVVEAGKGEAPKDSDTVVVNYKGTLIDGKEFDNSYTRGEPLSFRL--DGVIPG  162 (210)
T ss_dssp             CTTSCEEEEEECCSSCCCCTTCEEEEEEEEEETTSCEEEEGGGGTSCEEEEG--GGSCHH
T ss_pred             ccCceEEEEeeCCCCCCCCCCceEEEEEEEEEcCCCEEeecccCCCcceecc--Cccchh
Confidence            9999999999999999999999999999999999999999999999999999  679986

>d1u79a_ d.26.1.1 (A:) FKBP13 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKBP13
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.60  E-value=3.8e-16  Score=117.57  Aligned_cols=64  Identities=34%  Similarity=0.628  Sum_probs=60.7

Q ss_pred             CeeecCCccEEEEeecccCCCCCCCCeEEEEEEEEeCCCCEEeccccCCCCeEEEeCCCceecC
Q 029631          127 NYTKRDSGLIYRDFEVGKGDCPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPG  190 (190)
Q Consensus       127 gv~~t~sGL~y~vlkeG~G~~p~~gD~V~v~Y~G~l~dGtvFDSS~~~g~P~~f~lG~g~vIpG  190 (190)
                      .+++++|||+|+++++|+|+.|+.||.|.|||+|++.||++||+|+.++.|+.|.+|.+.+|+|
T Consensus         2 ~~~~~psGl~y~~~~~G~G~~p~~gd~V~v~y~g~l~~G~~fdss~~~~~p~~~~~g~~~~i~g   65 (125)
T d1u79a_           2 EFSVSPSGLAFCDKVVGYGPEAVKGQLIKAHYVGKLENGKVFDSSYNRGKPLTFRIGVGEVIKG   65 (125)
T ss_dssp             CCEECTTSCEEEEEECCSSCBCCTTCEEEEEEEEECTTSCEEEEHHHHTSCEEEETTSSSSCHH
T ss_pred             CcEECCCCCEEEEEEeccCCCCCCCCEEEEEEEeeecCCcEEecccccCcceeEecCccccccc
Confidence            4689999999999999999999999999999999999999999999989999999999888875

>d1jvwa_ d.26.1.1 (A:) Macrophage infectivity potentiator protein (MIP) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: Macrophage infectivity potentiator protein (MIP)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.60  E-value=7e-16  Score=121.63  Aligned_cols=71  Identities=27%  Similarity=0.514  Sum_probs=63.8

Q ss_pred             hHhhccccccccCCCeeecCCccEEEEeecccCC-CCCCCCeEEEEEEEEeCCCCEEeccccCCCCeEEEeCCCceecC
Q 029631          113 FIREGFEVKVVTSENYTKRDSGLIYRDFEVGKGD-CPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPG  190 (190)
Q Consensus       113 fl~~~~~~k~~~~~gv~~t~sGL~y~vlkeG~G~-~p~~gD~V~v~Y~G~l~dGtvFDSS~~~g~P~~f~lG~g~vIpG  190 (190)
                      |+++|     ...++++++++||+|+++++|+|. .|..||.|.|||+|++.||++||+++.++.|+.+.+  +++|+|
T Consensus        19 f~~~~-----~~~~~~~~~~sGl~y~il~~G~G~~~P~~gd~V~v~Y~g~l~dG~~fds~~~~~~p~~~~~--~~~i~G   90 (160)
T d1jvwa_          19 FMEQK-----AAQPDAVKLPSGLVFQRIARGSGKRAPAIDDKCEVHYTGRLRDGTVFDSSRERGKPTTFRP--NEVIKG   90 (160)
T ss_dssp             HHHHH-----HHSTTEEECTTSCEEEEEECCCCSBCCCTTCCEEEEEEEECTTSCEEEEHHHHTSCEEECG--GGSCHH
T ss_pred             HHHHh-----ccCCCCEECCCCCEEEEEECcccccCCCCCcceEEEEEEEEccCCeeeeeccccCccccCc--cccchh
Confidence            47777     778899999999999999999997 699999999999999999999999998888877665  788876

>d1q1ca1 d.26.1.1 (A:21-140) FKBP52, N-terminal domains {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKBP52, N-terminal domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.53  E-value=8.7e-15  Score=110.15  Aligned_cols=59  Identities=24%  Similarity=0.442  Sum_probs=55.9

Q ss_pred             CCccEEEEeecccCC-CCCCCCeEEEEEEEEeCCCCEEeccccCCCCeEEEeCCCceecC
Q 029631          132 DSGLIYRDFEVGKGD-CPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPG  190 (190)
Q Consensus       132 ~sGL~y~vlkeG~G~-~p~~gD~V~v~Y~G~l~dGtvFDSS~~~g~P~~f~lG~g~vIpG  190 (190)
                      ++||+|+++++|+|. .|..||+|.|||++++.||++||||++++.|+.|.+|.+++|+|
T Consensus        10 d~gv~~~i~~~G~G~~~P~~gd~V~v~y~~~l~dG~~fdss~~~~~p~~f~~g~~~~i~G   69 (120)
T d1q1ca1          10 DEGVLKVIKREGTGTEMPMIGDRVFVHYTGWLLDGTKFDSSLDRKDKFSFDLGKGEVIKA   69 (120)
T ss_dssp             SSSEEEEEEECCSSSCCCCTTCEEEEEEEEEETTSCEEEESTTSSSCEEEETTTTSSCHH
T ss_pred             CCCEEEEEEEcccCCcCCCCCCEEEEEEEEEEcCCCEEEeccccccceeeecCCCceeee
Confidence            489999999999996 58999999999999999999999999999999999999999986

>d1r9ha_ d.26.1.1 (A:) FKB-6, N-terminal domain {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKB-6, N-terminal domain
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.48  E-value=1.4e-14  Score=108.62  Aligned_cols=61  Identities=30%  Similarity=0.536  Sum_probs=57.0

Q ss_pred             ecCCccEEEEeecccCC-CCCCCCeEEEEEEEEeCCCCEEeccccCCCCeEEEeCCCceecC
Q 029631          130 KRDSGLIYRDFEVGKGD-CPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPG  190 (190)
Q Consensus       130 ~t~sGL~y~vlkeG~G~-~p~~gD~V~v~Y~G~l~dGtvFDSS~~~g~P~~f~lG~g~vIpG  190 (190)
                      +.++||+|+++++|+|. .|..||.|++||++++.||++||+|+.++.|+.|.+|.+++|+|
T Consensus         7 ~~d~Gl~~~il~~G~G~~~p~~gd~V~v~y~~~l~dG~v~dss~~~~~p~~f~~g~~~vi~G   68 (118)
T d1r9ha_           7 KKDGGVLKLIKKEGQGVVKPTTGTTVKVHYVGTLENGTKFDSSRDRGDQFSFNLGRGNVIKG   68 (118)
T ss_dssp             TCCSSEEEEEEECCBSSCCCCTTCEEEEEEEEEETTSCEEEEHHHHTSCEEEETTTTSSCHH
T ss_pred             cCCCCEEEEEEECcCCCCCCCCCCEEEEEEEEEEcCCCEEEEccccceeeeeeccCcceeee
Confidence            34689999999999996 69999999999999999999999999999999999999999986

>d2ppna1 d.26.1.1 (A:1-107) FK-506 binding protein (FKBP12), an immunophilin {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FK-506 binding protein (FKBP12), an immunophilin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.46  E-value=2.1e-14  Score=105.57  Aligned_cols=57  Identities=30%  Similarity=0.629  Sum_probs=54.4

Q ss_pred             ccEEEEeecccCCC-CCCCCeEEEEEEEEeCCCCEEeccccCCCCeEEEeCCCceecC
Q 029631          134 GLIYRDFEVGKGDC-PKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPG  190 (190)
Q Consensus       134 GL~y~vlkeG~G~~-p~~gD~V~v~Y~G~l~dGtvFDSS~~~g~P~~f~lG~g~vIpG  190 (190)
                      ||+|+++++|+|.. |+.||.|.+||+|++.||++||+|++++.|+.|.+|.+++|||
T Consensus         1 Gv~~~~l~~G~G~~~p~~gd~V~v~y~g~l~dG~~~d~s~~~~~p~~~~~g~~~~i~G   58 (107)
T d2ppna1           1 GVQVETISPGDGRTFPKRGQTCVVHYTGMLEDGKKFDSSRDRNKPFKFMLGKQEVIRG   58 (107)
T ss_dssp             CEEEEEEECCCSSCCCCTTCEEEEEEEEEETTSCEEEEHHHHTSCEEEETTSCCSCHH
T ss_pred             CcEEEEEECcCCccCCCCCCEEEEEEEEEecCCeEEEeeeccceeeeEeeCcchhhee
Confidence            89999999999985 8999999999999999999999999999999999999999986

>d1kt1a2 d.26.1.1 (A:28-138) FKBP51, N-terminal domains {Monkey (Saimiri boliviensis) [TaxId: 27679]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKBP51, N-terminal domains
species: Monkey (Saimiri boliviensis) [TaxId: 27679]

Probab=99.46  E-value=6.6e-15  Score=109.11  Aligned_cols=61  Identities=28%  Similarity=0.514  Sum_probs=41.5

Q ss_pred             ecCCccEEEEeecccCC-CCCCCCeEEEEEEEEeCCCCEEeccccCCCCeEEEeCCCceecC
Q 029631          130 KRDSGLIYRDFEVGKGD-CPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPG  190 (190)
Q Consensus       130 ~t~sGL~y~vlkeG~G~-~p~~gD~V~v~Y~G~l~dGtvFDSS~~~g~P~~f~lG~g~vIpG  190 (190)
                      ++++||+|+++++|+|. .|..||.|+|||++++.||++||||++++.|+.|.+|.+++|||
T Consensus         1 k~d~Gi~~~i~~~G~g~~~P~~gd~V~v~y~~~l~dG~~~dss~~~~~p~~f~lg~~~~i~G   62 (111)
T d1kt1a2           1 KKDRGVLKIVKRVGHGEETPMIGDRVYVHYNGKLANGKKFDSSHDRNEPFVFSIGKGQVIKA   62 (111)
T ss_dssp             CCSCSCEEEC----CCSCCCCTTCEEEEECCCCSCC------------CEEEETTSSSSCHH
T ss_pred             CCCCCeEEEEEEcccCCcCCCCCCEEEEEEEEEECCCCEEEEEEecceeeeeecCCCcEEee
Confidence            35789999999999996 59999999999999999999999999999999999999999986

>d1yata_ d.26.1.1 (A:) Calcineurin (FKBP12.6) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: Calcineurin (FKBP12.6)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.46  E-value=4.9e-14  Score=104.37  Aligned_cols=62  Identities=29%  Similarity=0.546  Sum_probs=58.0

Q ss_pred             eecCCccEEEEeecccCCC-CCCCCeEEEEEEEEeCCCCEEeccccCCCCeEEEeCCCceecC
Q 029631          129 TKRDSGLIYRDFEVGKGDC-PKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPG  190 (190)
Q Consensus       129 ~~t~sGL~y~vlkeG~G~~-p~~gD~V~v~Y~G~l~dGtvFDSS~~~g~P~~f~lG~g~vIpG  190 (190)
                      ..+++||+|+++++|+|.. |+.||.|.+||+|++.||++||++|+++.|+.|.++.+++|+|
T Consensus         2 ~~~d~gl~~~~l~~G~G~~~P~~gd~V~v~y~~~~~dG~~~ds~~~~~~~~~~~~~~~~~i~G   64 (113)
T d1yata_           2 EVIEGNVKIDRISPGDGATFPKTGDLVTIHYTGTLENGQKFDSSVDRGSPFQCNIGVGQVIKG   64 (113)
T ss_dssp             EECGGGCEEEEEECCCSSCCCCTTCEEEEEEEEEETTSCEEEESTTTTCCEEEETTSSSSCHH
T ss_pred             cCccCCcEEEEEECccCCcCCCCCCEEEEEEEEEEecCcEEeccccCCceEeeeeccCceeee
Confidence            3578999999999999975 8999999999999999999999999999999999999999986

>d1pbka_ d.26.1.1 (A:) FKBP25 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKBP25
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.32  E-value=1.2e-12  Score=97.20  Aligned_cols=57  Identities=21%  Similarity=0.397  Sum_probs=51.6

Q ss_pred             ccEEEEeecccCC-CCCCCCeEEEEEEEEeCCCCEEecccc-------CCCCeEEEeCCCceecC
Q 029631          134 GLIYRDFEVGKGD-CPKDGQQVIFHYIGYNESGRRIDSTYL-------QGSPARIRMGTNALVPG  190 (190)
Q Consensus       134 GL~y~vlkeG~G~-~p~~gD~V~v~Y~G~l~dGtvFDSS~~-------~g~P~~f~lG~g~vIpG  190 (190)
                      .+.++|+++|+|. .|+.||.|+|||+|++.||++||||++       ++.|+.|.+|.+++|||
T Consensus         2 ~~~k~vl~~G~G~~~P~~gd~V~v~y~~~l~dG~~fdss~~~~~~~~~~~~p~~f~lg~~~~i~G   66 (116)
T d1pbka_           2 KYTKSVLKKGDKTNFPKKGDVVHCWYTGTLQDGTVFDTNIQTSAKKKKNAKPLSFKVGVGKVIRG   66 (116)
T ss_dssp             CEEEEEEECCCSSCCCCTTCEEEEEEEEECTTSCEEEECCCSSCCTTTSSCCEEEETTTTSSCHH
T ss_pred             cceEEEEecCCCCCCCCCCCEEEEEEEEEECCCCEeecccccccccccCCCceeeeecccccccc
Confidence            4678999999996 699999999999999999999999975       45799999999999986

>d1kt1a3 d.26.1.1 (A:139-253) FKBP51, N-terminal domains {Monkey (Saimiri boliviensis) [TaxId: 27679]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKBP51, N-terminal domains
species: Monkey (Saimiri boliviensis) [TaxId: 27679]

Probab=98.69  E-value=8.3e-09  Score=75.22  Aligned_cols=55  Identities=29%  Similarity=0.509  Sum_probs=44.8

Q ss_pred             ecCCccEEEEeecccC-CCCCCCCeEEEEEEEEeCCCCEEeccccCCCCeEEEeCCC---ceecC
Q 029631          130 KRDSGLIYRDFEVGKG-DCPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTN---ALVPG  190 (190)
Q Consensus       130 ~t~sGL~y~vlkeG~G-~~p~~gD~V~v~Y~G~l~dGtvFDSS~~~g~P~~f~lG~g---~vIpG  190 (190)
                      +.++||.|+++++|+| ..|..||+|+|||+|++ +|++|+++     +..|.++.+   ++|||
T Consensus         5 ~~D~gi~k~il~~G~G~~~p~~gd~V~v~y~g~~-~g~~~~~~-----~~~~~~~~~~~~~vi~G   63 (115)
T d1kt1a3           5 LEDGGIIRRTKRRGEGYSNPNEGARVQIHLEGRC-GGRVFDCR-----DVAFTVGEGEDHDIPIG   63 (115)
T ss_dssp             TSSSSEEEEEEECCCCSSCCCTTCEEEEEEEEEE-TTEEEEEE-----EEEEETTCGGGGTCCHH
T ss_pred             ccCCCEEEEEEEeecCCCCCCCCCEEEEEEEEEe-CCcccccc-----ccCceeeeccccccCch
Confidence            4578999999999999 58999999999999997 88999876     456666532   46665

>d1q1ca2 d.26.1.1 (A:141-257) FKBP52, N-terminal domains {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKBP52, N-terminal domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.51  E-value=1.2e-08  Score=74.60  Aligned_cols=40  Identities=30%  Similarity=0.435  Sum_probs=34.7

Q ss_pred             cCCccEEEEeecccCC-CCCCCCeEEEEEEEEeCCCCEEecc
Q 029631          131 RDSGLIYRDFEVGKGD-CPKDGQQVIFHYIGYNESGRRIDST  171 (190)
Q Consensus       131 t~sGL~y~vlkeG~G~-~p~~gD~V~v~Y~G~l~dGtvFDSS  171 (190)
                      .++||.|+++++|+|. .|..||.|+|||+|++.||+ |+.+
T Consensus         6 ~D~gi~~~il~~G~G~~~p~~gd~V~v~y~g~~~~~~-~~~~   46 (117)
T d1q1ca2           6 EDGGIIRRIQTRGEGYAKPNEGAIVEVALEGYYKDKL-FDQR   46 (117)
T ss_dssp             CSSSEEEEEEECCSCSCCCCTTCEEEEEEEEEETTEE-EEEE
T ss_pred             CCCCEEEEEEeeecCCCCCCCCCEEEEEEEEEeCCCc-Eeec
Confidence            3589999999999995 79999999999999997775 5654

>d1hxva_ d.26.1.1 (A:) Trigger factor PPIase domain {Mycoplasma genitalium [TaxId: 2097]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: Trigger factor PPIase domain
species: Mycoplasma genitalium [TaxId: 2097]

Probab=97.77  E-value=1.1e-05  Score=55.92  Aligned_cols=41  Identities=17%  Similarity=0.417  Sum_probs=36.1

Q ss_pred             CCCCCCeEEEEEEEEeCCCCEEeccccCCCCeEEEeCCCceecC
Q 029631          147 CPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPG  190 (190)
Q Consensus       147 ~p~~gD~V~v~Y~G~l~dGtvFDSS~~~g~P~~f~lG~g~vIpG  190 (190)
                      ++..||.|+|+|+|++ ||+.|+++..  ..+.|.+|.+++|||
T Consensus         1 k~a~GD~V~idy~g~~-dG~~~~~~~~--~~~~~~lg~~~~ipg   41 (85)
T d1hxva_           1 KLANGDIAIIDFTGIV-DNKKLASASA--QNYELTIGSNSFIKG   41 (85)
T ss_dssp             CCCSSEEEEEEEEEEE-TTEECSTTCC--SEEEEEETSSCSCTT
T ss_pred             CCCCCCEEEEEEEEEE-CCEEcccccc--cCCCEEECCcccCch
Confidence            4678999999999997 9999999864  468889999999997

>d1t11a3 d.26.1.1 (A:135-247) Trigger factor PPIase domain {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: Trigger factor PPIase domain
species: Vibrio cholerae [TaxId: 666]

Probab=95.48  E-value=0.0042  Score=44.46  Aligned_cols=41  Identities=20%  Similarity=0.525  Sum_probs=34.2

Q ss_pred             CCCCCCeEEEEEEEEeCCCCEEeccccCCCCeEEEeCCCceecC
Q 029631          147 CPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPG  190 (190)
Q Consensus       147 ~p~~gD~V~v~Y~G~l~dGtvFDSS~~~g~P~~f~lG~g~vIpG  190 (190)
                      .+..||.|+|+|.|+. ||+.|+..-  +..+.|.+|.+++|||
T Consensus        23 ~a~~gD~v~id~~~~~-dG~~~~~~~--~~~~~~~lg~~~~~~~   63 (113)
T d1t11a3          23 AAENGKRVSIDFVGSI-DGVEFEGGK--AENFPLEMGAGRMIPG   63 (113)
T ss_dssp             CCCTTCEEEEEEEEES-SSSCCTTCE--EEEEEEETTSCCBSTT
T ss_pred             cccCCCEEEEEEEEEE-CCEEccCCc--cceEEEEecccccccc
Confidence            4789999999999997 899987652  3568889999888886

>d1l1pa_ d.26.1.1 (A:) Trigger factor PPIase domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: Trigger factor PPIase domain
species: Escherichia coli [TaxId: 562]

Probab=95.06  E-value=0.0038  Score=44.35  Aligned_cols=42  Identities=19%  Similarity=0.414  Sum_probs=34.4

Q ss_pred             CCCCCCCeEEEEEEEEeCCCCEEeccccCCCCeEEEeCCCceecC
Q 029631          146 DCPKDGQQVIFHYIGYNESGRRIDSTYLQGSPARIRMGTNALVPG  190 (190)
Q Consensus       146 ~~p~~gD~V~v~Y~G~l~dGtvFDSS~~~g~P~~f~lG~g~vIpG  190 (190)
                      .+++.||.|+|+|+|+. ||+.|+..-  ..-+.|.+|.+.+|||
T Consensus        13 r~a~~GD~v~id~~~~~-dG~~~~~~~--~~~~~~~lg~~~~~~g   54 (106)
T d1l1pa_          13 GAVEAEDRVTIDFTGSV-DGEEFEGGK--ASDFVLAMGQGRMIPG   54 (106)
T ss_dssp             SSCCTTEEEEEEEECCS-SSSCCSTTE--EEEEEEEETTSCCCTT
T ss_pred             ccccCCCEEEEEEEEEE-CCEECCCCc--ccceEEEecCCCccch
Confidence            46789999999999975 999997643  2458899999998886