Citrus Sinensis ID: 029691

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------19
Protein Sequence
MGGDWFKTFVCQKKVKVGSSKQVKGSSASAKSKGFKWKKPLGKESSIFAIGSTLGMPVEDVAAIRIQTAFRAYKARKTFRRLKGTIRLQGVSQRHSVQKQATTTLSYLHTWSKLQAEIRARRLCMVKEGRLRQKKLENQLKLDAKLNSLEIDWSGGPETMEEILSRINQREKAAVKRERAMAYAFSHQT
Secondary Structure (PSIPRED)
ccHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHHHHHccccccccEccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Coil and Loop (DISEMBL)
mggdwfktfvcqkkvkvgsskqvkgssasakskgfkwkkplgkessifaigstlgmpveDVAAIRIQTAFRAYKARKTFRRLKGTIRLQGVSQRHSVQKQATTTLSYLHTWSKLQAEIRARRLCMVKEGRLRQKKLENQLKLDAKLNSLeidwsggpeTMEEILSRINQREKAAVKRERAMAYAFSHQT
Flexible Loop (DISEMBL)
mggdwfktfvcqkkvkvgsskqvkgssasakskgfkwkkplgkESSIFAIGSTLGMPVEDVAAIRIQTAFRAYKARKTFRRLKgtirlqgvsqrhsvqkqatttlsylhtWSKLQAEIRARRLCMVKEgrlrqkklenqlkldaklnsleidwsggpeTMEEILSRINQREKAAVKRERAMAYAFSHQT
Low Complexity Region (SEG)
MGGDWFKTFVCQkkvkvgsskqvkgssasakskgfkwkkPLGKESSIFAIGSTLGMPVEDVAAIRIQTAFRAYKARKTFRRLKGTIRLQGVSQRHSVQKQATTTLSYLHTWSKLQAEIRARRLCMVKEGRLRQKKLENQLKLDAKLNSLEIDWSGGPETMEEILSRINQREKAAVKRERAMAYAFSHQT
Disordered region (IsUnstruct)
****WFKTFVCQKKV*****************************SSIFAIGSTLGMPVEDVAAIRIQTAFRAYKARKTFRRLKGTIRLQGVSQRHSVQKQATTTLSYLHTWSKLQAEIRARRLCMVKEGRLR*******LKLDAKLNSLEIDW************************************
Disordered Region (DISOPRED)
*GGDWFKT****************************************************VAAIRIQTAFRAYKARKTFRRLKGTIRLQGVSQR*SVQKQATTTLSYLHTWSKLQAEIRARR*******************************************************ERAMAYAF*H**
Disordered Region (DISEMBL)
MGGDWFKTFVCQKKV*********************WKKPLGKESSIFAIGSTLGMPVEDVAAIRIQTAFRAYKARKTFRRLKGTIRL*************TTTLSYLHTWSKLQAEIRARRLCMVKEGRLRQKKLENQLKLDAKLNSLEIDWSGGPETMEEILSRINQREKAAVKRERAMAYAFSHQT
Disordered Region (DISPRO)
***DWFK*FVCQKKV***************************************GMPVEDVAAIRIQTAFRAYKARKTFRRLKGTIRLQGVSQRHSVQKQATTTLSYLHTWSKLQAEIRARRLCMVKEGRLRQKKLENQLKLDAKLN****DWSGGPETMEEILSRINQREKAAVKRERAMAYAFSH**
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGGDWFKTFVCQKKVKVGSSKQVKGSSASAKSKGFKWKKPLGKESSIFAIGSTLGMPVEDVAAIRIQTAFRAYKARKTFRRLKGTIRLQGVSQRHSVQKQATTTLSYLHTWSKLQAEIRARRLCMVKEGRLRQKKLENQLKLDAKLNSLEIDWSGGPETMEEILSRINQREKAAVKRERAMAYAFSHQT
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	189	2.2.26 [Sep-21-2011]
Q8LPG9	668	Protein IQ-DOMAIN 14 OS=A	no	no	0.640	0.181	0.394	1e-17
Q9SF32	454	Protein IQ-DOMAIN 1 OS=Ar	no	no	0.671	0.279	0.368	2e-14
Q8L4D8	587	Protein IQ-DOMAIN 31 OS=A	no	no	0.338	0.109	0.437	4e-06

>sp|Q8LPG9|IQD14_ARATH Protein IQ-DOMAIN 14 OS=Arabidopsis thaliana GN=IQD14 PE=1 SV=1

 Score = 89.7 bits (221), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 54/137 (39%), Positives = 83/137 (60%), Gaps = 16/137 (11%)

Query: 56  MPVEDVAAIRIQTAFRAYKARKTFRRLKGTIRLQGVSQRHSVQKQATTTLSYLHTWSKLQ 115
           +PV+  +A +IQ AFR Y ARK+FR LKG +RLQGV + +SV++Q    + Y+    ++Q
Sbjct: 318 LPVQHASATKIQGAFRGYMARKSFRALKGLVRLQGVVRGYSVKRQTINAMKYMQQVVRVQ 377

Query: 116 AEIRARRLCMVKEGRLRQKKLENQLKL---DAKLNSLEI---DWSGGPETMEEILSRINQ 169
           ++I++RR+ M          LENQ ++   +AK  + E    +W     T EE  SR  +
Sbjct: 378 SQIQSRRIKM----------LENQAQVEKDEAKWAASEAGNDNWDDSVLTKEERDSRSQR 427

Query: 170 REKAAVKRERAMAYAFS 186
           +  A +KRER+MAYA+S
Sbjct: 428 KTDAIIKRERSMAYAYS 444

May be involved in cooperative interactions with calmodulins or calmodulin-like proteins. May associate with nucleic acids and regulate gene expression at the transcriptional or post-transcriptional level.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9SF32|IQD1_ARATH Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana GN=IQD1 PE=1 SV=1

 Score = 78.6 bits (192), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 49/133 (36%), Positives = 86/133 (64%), Gaps = 6/133 (4%)

Query: 59  EDVAAIRIQTAFRAYKARKTFRRLKGTIRLQGVSQRHSVQKQATTTLSYLHTWSKLQAEI 118
           E+ AAI IQ+ FR + AR+  + ++G  RL+ + +   VQ+QA  TL  + T S++Q++I
Sbjct: 107 EEAAAILIQSTFRGHLARRESQVMRGQERLKLLMEGSVVQRQAAITLKCMQTLSRVQSQI 166

Query: 119 RARRLCMVKEGRLRQKKLENQLKLDAK-LNSLEI--DWSGGPETMEEILSRINQREKAAV 175
           R+RR+ M +E + R K+L   L+  AK L  L+   +W+   ++ E++ + +  + +A +
Sbjct: 167 RSRRIRMSEENQARHKQL---LQKHAKELGGLKNGGNWNYSNQSKEQVEAGMLHKYEATM 223

Query: 176 KRERAMAYAFSHQ 188
           +RERA+AYAF+HQ
Sbjct: 224 RRERALAYAFTHQ 236

Modulates expression of glucosinolate pathway genes. May associate with nucleic acids and regulate gene expression at the transcriptional or post-transcriptional level.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8L4D8|IQD31_ARATH Protein IQ-DOMAIN 31 OS=Arabidopsis thaliana GN=IQD31 PE=1 SV=1

 Score = 51.2 bits (121), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 39/64 (60%)

Query: 60  DVAAIRIQTAFRAYKARKTFRRLKGTIRLQGVSQRHSVQKQATTTLSYLHTWSKLQAEIR 119
           ++AA  +Q AFR Y AR+ F  LKG IRLQ + + H V++QA  TL  +    +LQA  R
Sbjct: 113 EIAATSVQAAFRGYLARRAFWALKGIIRLQALIRGHLVRRQAVATLFSVMGIVRLQAFAR 172

Query: 120 ARRL 123
            R +
Sbjct: 173 GREI 176

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	189
224079131	312	predicted protein [Populus trichocarpa]	0.994	0.602	0.697	5e-71
118489299	312	unknown [Populus trichocarpa x Populus d	0.994	0.602	0.692	6e-70
224116948	312	predicted protein [Populus trichocarpa]	0.994	0.602	0.702	4e-69
225443514	306	PREDICTED: protein IQ-DOMAIN 1 [Vitis vi	0.994	0.614	0.661	9e-67
255563056	310	calmodulin binding protein, putative [Ri	0.994	0.606	0.666	3e-66
225461608	309	PREDICTED: protein IQ-DOMAIN 1 [Vitis vi	0.989	0.605	0.607	2e-56
147777594	309	hypothetical protein VITISV_013534 [Viti	0.989	0.605	0.602	1e-55
356555392	308	PREDICTED: protein IQ-DOMAIN 1-like [Gly	0.994	0.610	0.589	2e-54
449434304	326	PREDICTED: protein IQ-DOMAIN 1-like [Cuc	0.994	0.576	0.585	3e-53
356549256	299	PREDICTED: protein IQ-DOMAIN 1-like [Gly	0.994	0.628	0.579	4e-53

>gi|224079131|ref|XP_002305760.1| predicted protein [Populus trichocarpa] gi|222848724|gb|EEE86271.1| predicted protein [Populus trichocarpa]

 Score =  272 bits (695), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 136/195 (69%), Positives = 162/195 (83%), Gaps = 7/195 (3%)

Query: 1   MG-GDWFKTFVCQKKVKVGSSKQVKGSSASAKSKGFKWKKPLGKESSIFAIGST------ 53
           MG GDWFKT +  KKVK  SSKQ KGS+ SAKS GFKWK  L KES+IFA GS+      
Sbjct: 1   MGSGDWFKTMISMKKVKDDSSKQPKGSTTSAKSNGFKWKNKLRKESAIFANGSSRANPRF 60

Query: 54  LGMPVEDVAAIRIQTAFRAYKARKTFRRLKGTIRLQGVSQRHSVQKQATTTLSYLHTWSK 113
           + MPVEDVAA +IQTAFRAY ARKT RRLKGT+RLQ +++ +SV+KQA TTL+Y+H+WS+
Sbjct: 61  IDMPVEDVAATQIQTAFRAYMARKTLRRLKGTVRLQIITKNYSVKKQAATTLNYIHSWSQ 120

Query: 114 LQAEIRARRLCMVKEGRLRQKKLENQLKLDAKLNSLEIDWSGGPETMEEILSRINQREKA 173
           +QA+IRARRLCMV E RLRQKKLENQLKL+AKL+ LE++W GG +TMEE L+RI+ RE+A
Sbjct: 121 IQAQIRARRLCMVTESRLRQKKLENQLKLEAKLHDLEVEWCGGFDTMEETLARIHLREEA 180

Query: 174 AVKRERAMAYAFSHQ 188
           AVKRERAMAYAFSHQ
Sbjct: 181 AVKRERAMAYAFSHQ 195

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118489299|gb|ABK96454.1| unknown [Populus trichocarpa x Populus deltoides]

 Score =  268 bits (686), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 135/195 (69%), Positives = 160/195 (82%), Gaps = 7/195 (3%)

Query: 1   MGG-DWFKTFVCQKKVKVGSSKQVKGSSASAKSKGFKWKKPLGKESSIFAIGST------ 53
           MG  DWFKT +  KKVK  SSKQ KG + SAKS GFKWK  L KES+IFA GS+      
Sbjct: 1   MGSVDWFKTMISMKKVKDDSSKQPKGCTTSAKSNGFKWKNKLRKESAIFANGSSRANPRF 60

Query: 54  LGMPVEDVAAIRIQTAFRAYKARKTFRRLKGTIRLQGVSQRHSVQKQATTTLSYLHTWSK 113
           + MPVEDVAA +IQTAFRAY ARKT RRLKGT+RLQ +++ +SV+KQA TTL+YLH+WS+
Sbjct: 61  IDMPVEDVAATQIQTAFRAYMARKTLRRLKGTVRLQIITKNYSVKKQAATTLNYLHSWSQ 120

Query: 114 LQAEIRARRLCMVKEGRLRQKKLENQLKLDAKLNSLEIDWSGGPETMEEILSRINQREKA 173
           +QA+IRARRLCMV E RLRQKKLENQLKL+AKL+ LE++W GG +TMEE L+RI+ RE+A
Sbjct: 121 IQAQIRARRLCMVTESRLRQKKLENQLKLEAKLHDLEVEWCGGFDTMEETLARIHLREEA 180

Query: 174 AVKRERAMAYAFSHQ 188
           AVKRERAMAYAFSHQ
Sbjct: 181 AVKRERAMAYAFSHQ 195

Source: Populus trichocarpa x Populus deltoides

Species: Populus trichocarpa x Populus deltoides

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224116948|ref|XP_002317436.1| predicted protein [Populus trichocarpa] gi|222860501|gb|EEE98048.1| predicted protein [Populus trichocarpa]

 Score =  266 bits (679), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 137/195 (70%), Positives = 159/195 (81%), Gaps = 7/195 (3%)

Query: 1   MG-GDWFKTFVCQKKVKVGSSKQVKGSSASAKSKGFKWKKPLGKESSIFAIGSTLG---- 55
           MG GDWFKT +  KKVK  SSKQ KGSS S KS GFKWK  L KES+ FA GS       
Sbjct: 1   MGSGDWFKTIISIKKVKDDSSKQAKGSSTSEKSNGFKWKHKLQKESASFANGSNRANPRF 60

Query: 56  --MPVEDVAAIRIQTAFRAYKARKTFRRLKGTIRLQGVSQRHSVQKQATTTLSYLHTWSK 113
             MPVED+AA RIQTAFRAY+ARKT R LKG +RLQ ++Q +S +KQA TTL+YLH+WS+
Sbjct: 61  PDMPVEDLAATRIQTAFRAYRARKTLRCLKGKVRLQIITQNYSFKKQAATTLNYLHSWSQ 120

Query: 114 LQAEIRARRLCMVKEGRLRQKKLENQLKLDAKLNSLEIDWSGGPETMEEILSRINQREKA 173
           +QA+IRARRL MV EGRLRQKKLENQLKL+AKL+ LE++WSGG ETME+IL+RI+QRE+A
Sbjct: 121 IQAQIRARRLFMVTEGRLRQKKLENQLKLEAKLHDLEVEWSGGCETMEKILARIHQREEA 180

Query: 174 AVKRERAMAYAFSHQ 188
           AVKRERAMAYAFSHQ
Sbjct: 181 AVKRERAMAYAFSHQ 195

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225443514|ref|XP_002272018.1| PREDICTED: protein IQ-DOMAIN 1 [Vitis vinifera] gi|297740471|emb|CBI30653.3| unnamed protein product [Vitis vinifera]

 Score =  258 bits (659), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 129/195 (66%), Positives = 156/195 (80%), Gaps = 7/195 (3%)

Query: 1   MG-GDWFKTFVCQKKVKVGSSKQVKGSSASAKSKGFKWKKPLGKESSIFAIGST------ 53
           MG GDWFK  +  KKVK  +S++ KG+S  AKS GFKW+    K S+ F+ GST      
Sbjct: 1   MGSGDWFKAILSSKKVKGDNSRKTKGTSTDAKSNGFKWRSRTLKGSTGFSYGSTSGNPGV 60

Query: 54  LGMPVEDVAAIRIQTAFRAYKARKTFRRLKGTIRLQGVSQRHSVQKQATTTLSYLHTWSK 113
           LG+PVED+AA RIQTAFRA+ ARKT RRLKG +RLQ ++Q   V+KQA+TTLSYL +WS+
Sbjct: 61  LGIPVEDIAATRIQTAFRAFMARKTLRRLKGIVRLQKLTQGDCVRKQASTTLSYLSSWSR 120

Query: 114 LQAEIRARRLCMVKEGRLRQKKLENQLKLDAKLNSLEIDWSGGPETMEEILSRINQREKA 173
           +Q +IRARRLCMV EGR+RQKKLENQLKLDAKL+ LE++W GGPETMEEIL+RI  RE+A
Sbjct: 121 IQTQIRARRLCMVTEGRIRQKKLENQLKLDAKLHDLEVEWCGGPETMEEILARIYHREEA 180

Query: 174 AVKRERAMAYAFSHQ 188
           AVKRERA+AYAFSHQ
Sbjct: 181 AVKRERALAYAFSHQ 195

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255563056|ref|XP_002522532.1| calmodulin binding protein, putative [Ricinus communis] gi|223538223|gb|EEF39832.1| calmodulin binding protein, putative [Ricinus communis]

 Score =  256 bits (654), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 126/189 (66%), Positives = 153/189 (80%), Gaps = 1/189 (0%)

Query: 1   MG-GDWFKTFVCQKKVKVGSSKQVKGSSASAKSKGFKWKKPLGKESSIFAIGSTLGMPVE 59
           MG GDWFKT +  KKVK  SSK+VK SSA+AKS GFKWK    K+S+       L MPVE
Sbjct: 1   MGSGDWFKTIISLKKVKDDSSKRVKDSSAAAKSNGFKWKNQPRKKSATSCNPRVLDMPVE 60

Query: 60  DVAAIRIQTAFRAYKARKTFRRLKGTIRLQGVSQRHSVQKQATTTLSYLHTWSKLQAEIR 119
           D AA RIQTAFRAY ARK+  RLKG +RLQ ++Q +S++KQA TTL++LH+WSK+Q +IR
Sbjct: 61  DFAATRIQTAFRAYMARKSLHRLKGAVRLQNLTQNYSIKKQAATTLNHLHSWSKIQGQIR 120

Query: 120 ARRLCMVKEGRLRQKKLENQLKLDAKLNSLEIDWSGGPETMEEILSRINQREKAAVKRER 179
            RR CMV+EGRLRQK+LENQLKL+A+L+ LE++WS G ETMEE L+RI+QRE+AAVKRER
Sbjct: 121 DRRHCMVREGRLRQKRLENQLKLEAELHHLEVEWSDGSETMEETLARIHQREEAAVKRER 180

Query: 180 AMAYAFSHQ 188
           AMAYAFSHQ
Sbjct: 181 AMAYAFSHQ 189

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225461608|ref|XP_002282973.1| PREDICTED: protein IQ-DOMAIN 1 [Vitis vinifera] gi|302142924|emb|CBI20219.3| unnamed protein product [Vitis vinifera]

 Score =  224 bits (570), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 119/196 (60%), Positives = 145/196 (73%), Gaps = 9/196 (4%)

Query: 1   MG-GDWFKTFVCQKKVKVGSSKQVKGSSASAKSKGFKWKKPLGKESSIFAIGSTLG---- 55
           MG G WFK  +  +KVK   SK  K  S + KS   K K  + KESS  A G+ LG    
Sbjct: 1   MGAGGWFKMIISLRKVKEDRSKPAKVHSTTEKSSNSKGKHHIDKESSSLANGA-LGKSAG 59

Query: 56  ---MPVEDVAAIRIQTAFRAYKARKTFRRLKGTIRLQGVSQRHSVQKQATTTLSYLHTWS 112
              +PVE+ AAI+IQT +RAYKARK   RL+GT+R Q ++Q   V+KQA+TTLSY+H WS
Sbjct: 60  VHKIPVEERAAIQIQTTYRAYKARKNLHRLRGTVRFQVMTQGDIVRKQASTTLSYIHAWS 119

Query: 113 KLQAEIRARRLCMVKEGRLRQKKLENQLKLDAKLNSLEIDWSGGPETMEEILSRINQREK 172
           ++QA+I ARR CM +EGR+RQKKLENQLKL+AKL+ LE++W GG ETMEEILSRI QRE+
Sbjct: 120 RIQAQISARRHCMAQEGRVRQKKLENQLKLEAKLHELEVEWCGGSETMEEILSRIQQREE 179

Query: 173 AAVKRERAMAYAFSHQ 188
           AAVKRERAMAYAFSHQ
Sbjct: 180 AAVKRERAMAYAFSHQ 195

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147777594|emb|CAN67034.1| hypothetical protein VITISV_013534 [Vitis vinifera]

 Score =  221 bits (563), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 118/196 (60%), Positives = 143/196 (72%), Gaps = 9/196 (4%)

Query: 1   MG-GDWFKTFVCQKKVKVGSSKQVKGSSASAKSKGFKWKKPLGKESSIFAIGSTLG---- 55
           MG G WFK  +  +KVK   SK  K  S + KS   K K    KE S  A G+ LG    
Sbjct: 1   MGAGGWFKMIISLRKVKXDRSKPAKVHSTTEKSSNSKGKHHTDKEXSSLANGA-LGKSAG 59

Query: 56  ---MPVEDVAAIRIQTAFRAYKARKTFRRLKGTIRLQGVSQRHSVQKQATTTLSYLHTWS 112
              +PVE+ AAI+IQT +RAYKARK   RL+GT+R Q ++Q   V+KQA+TTLSY+H WS
Sbjct: 60  VHKIPVEERAAIQIQTTYRAYKARKNLHRLRGTVRFQVMTQGDIVRKQASTTLSYIHAWS 119

Query: 113 KLQAEIRARRLCMVKEGRLRQKKLENQLKLDAKLNSLEIDWSGGPETMEEILSRINQREK 172
           ++QA+I ARR CM +EGR+RQKKLENQLKL+AKL+ LE++W GG ETMEEILSRI QRE+
Sbjct: 120 RIQAQISARRHCMAQEGRVRQKKLENQLKLEAKLHELEVEWCGGSETMEEILSRIQQREE 179

Query: 173 AAVKRERAMAYAFSHQ 188
           AAVKRERAMAYAFSHQ
Sbjct: 180 AAVKRERAMAYAFSHQ 195

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356555392|ref|XP_003546016.1| PREDICTED: protein IQ-DOMAIN 1-like [Glycine max]

 Score =  217 bits (553), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 115/195 (58%), Positives = 143/195 (73%), Gaps = 7/195 (3%)

Query: 1   MG-GDWFKTFVCQKKVKVGSSKQVKGSSASAKSKGFKWKKPLGKESSIFAIG------ST 53
           MG GDWFKT +  +K K G SK+ KG     K    K     GKESS    G       +
Sbjct: 1   MGSGDWFKTIISLRKSKEGRSKKAKGILTQEKLNASKSNNYPGKESSGLTNGIKSENLVS 60

Query: 54  LGMPVEDVAAIRIQTAFRAYKARKTFRRLKGTIRLQGVSQRHSVQKQATTTLSYLHTWSK 113
            G+ VE +AA RIQTAFRAYKARK  RR+KG  +L+ +++  SV+KQA+T ++YLH+WSK
Sbjct: 61  AGVSVETIAATRIQTAFRAYKARKALRRMKGFTKLKILTEGFSVKKQASTAVTYLHSWSK 120

Query: 114 LQAEIRARRLCMVKEGRLRQKKLENQLKLDAKLNSLEIDWSGGPETMEEILSRINQREKA 173
           +QAEIRARR+CMV E R+R+KKLE+QLKL+AKL+ LE++W GG ETMEEIL RI+ RE+A
Sbjct: 121 IQAEIRARRICMVTEDRIRRKKLESQLKLEAKLHDLEVEWCGGSETMEEILGRIHHREEA 180

Query: 174 AVKRERAMAYAFSHQ 188
           AVKRERAMAYAFSHQ
Sbjct: 181 AVKRERAMAYAFSHQ 195

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449434304|ref|XP_004134936.1| PREDICTED: protein IQ-DOMAIN 1-like [Cucumis sativus]

 Score =  213 bits (542), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 117/200 (58%), Positives = 145/200 (72%), Gaps = 12/200 (6%)

Query: 1   MG-GDWFKTFVCQKKVKVGSSKQVK-----GSSASAKSKGFKWKKPLGKESSIF----AI 50
           MG G WFK  +  KKVK  SSKQ K        A A+S    +     K+S  F    A 
Sbjct: 1   MGSGRWFKAVIRLKKVKTSSSKQTKLGLVFFKLALARSSFHLYAFANLKDSPRFKSDGAN 60

Query: 51  GST--LGMPVEDVAAIRIQTAFRAYKARKTFRRLKGTIRLQGVSQRHSVQKQATTTLSYL 108
           G++  L MP+EDVAA+RIQTA+RAY+ARK  R LKG  RLQ ++Q HSV+K AT+TL YL
Sbjct: 61  GNSKSLSMPIEDVAAVRIQTAYRAYRARKNLRLLKGAFRLQNLTQGHSVRKHATSTLGYL 120

Query: 109 HTWSKLQAEIRARRLCMVKEGRLRQKKLENQLKLDAKLNSLEIDWSGGPETMEEILSRIN 168
           H+WS +QA+IRARRLCMV EGR RQK+LENQ KL+AKL+ +E++W GG ++M+ ILSRI+
Sbjct: 121 HSWSHIQAQIRARRLCMVTEGRQRQKRLENQRKLEAKLHDIEVEWCGGADSMDGILSRIH 180

Query: 169 QREKAAVKRERAMAYAFSHQ 188
            RE+AAVKRERAMAYAFSHQ
Sbjct: 181 DREEAAVKRERAMAYAFSHQ 200

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356549256|ref|XP_003543012.1| PREDICTED: protein IQ-DOMAIN 1-like [Glycine max]

 Score =  213 bits (541), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 113/195 (57%), Positives = 143/195 (73%), Gaps = 7/195 (3%)

Query: 1   MG-GDWFKTFVCQKKVKVGSSKQVKGSSASAKSKGFKWKKPLGKESSIFAIGS------T 53
           MG GDWFKT +  +K K G SK+ KG  A  K    K     GKES   A G+      +
Sbjct: 1   MGSGDWFKTIISLRKSKQGRSKKAKGILAQEKLNASKSNSYPGKESGGLANGTKSENLVS 60

Query: 54  LGMPVEDVAAIRIQTAFRAYKARKTFRRLKGTIRLQGVSQRHSVQKQATTTLSYLHTWSK 113
            G+ VE +AA RIQTAFRAYKARK  RR+KG  +L+ +++  SV+KQA+T ++YLH+WSK
Sbjct: 61  AGVSVETIAAKRIQTAFRAYKARKALRRMKGFTKLKILTEGFSVKKQASTAITYLHSWSK 120

Query: 114 LQAEIRARRLCMVKEGRLRQKKLENQLKLDAKLNSLEIDWSGGPETMEEILSRINQREKA 173
           +Q EIRARR+CMV E ++R+KKLE+QLKL+AKL+ LE++W GG ET EEIL RI+ RE+A
Sbjct: 121 IQVEIRARRICMVTEDKIRRKKLESQLKLEAKLHDLEVEWCGGSETKEEILGRIHDREEA 180

Query: 174 AVKRERAMAYAFSHQ 188
           AVKRERAMAYAFSHQ
Sbjct: 181 AVKRERAMAYAFSHQ 195

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	189
TAIR|locus:2055430	263	iqd9 "AT2G33990" [Arabidopsis	0.730	0.524	0.608	5.9e-41
TAIR|locus:2086385	259	IQD10 "AT3G15050" [Arabidopsis	0.682	0.498	0.589	2.7e-36
TAIR|locus:2090409	422	IQD5 "AT3G22190" [Arabidopsis	0.687	0.308	0.424	1.1e-22
TAIR|locus:2057459	416	IQD6 "AT2G26180" [Arabidopsis	0.682	0.310	0.442	6.7e-22
TAIR|locus:2097478	517	IQD13 "AT3G59690" [Arabidopsis	0.666	0.243	0.404	1.3e-20
TAIR|locus:2100504	430	IQD3 "AT3G52290" [Arabidopsis	0.698	0.306	0.358	2.4e-19
TAIR|locus:2143503	461	iqd2 "AT5G03040" [Arabidopsis	0.703	0.288	0.377	3.9e-19
TAIR|locus:2043959	669	IQD14 "AT2G43680" [Arabidopsis	0.682	0.192	0.383	1.2e-17
TAIR|locus:2018837	371	IQD7 "AT1G17480" [Arabidopsis	0.619	0.315	0.343	8.1e-17
TAIR|locus:2030225	414	iqd8 "AT1G72670" [Arabidopsis	0.661	0.301	0.370	9.6e-17

TAIR|locus:2055430 iqd9 "AT2G33990" [Arabidopsis thaliana (taxid:3702)]

 Score = 435 (158.2 bits), Expect = 5.9e-41, P = 5.9e-41
 Identities = 84/138 (60%), Positives = 111/138 (80%)

Query:    51 GSTLGMPVEDVAAIRIQTAFRAYKARKTFRRLKGTIRLQGVSQRHSVQKQATTTLSYLHT 110
             G++L    ED AA RIQTAF+AYKARK+ RRLKG  R +  +++ SV+ QA  TL YLH+
Sbjct:    38 GTSLVTRSEDWAATRIQTAFKAYKARKSLRRLKGIARAKLSTEKQSVKNQAVVTLRYLHS 97

Query:   111 WSKLQAEIRARRLCMVKEGRLRQKKLENQLKLDAKLNSLEIDWSGGPETMEEILSRINQR 170
             WSK+Q+EI+ARR+CMV E RL+ K+LE+Q KL+AKL+ +E++W+GG ET +EIL RI QR
Sbjct:    98 WSKIQSEIKARRVCMVTEWRLKNKRLEHQQKLEAKLHDVEVEWNGGSETKDEILERILQR 157

Query:   171 EKAAVKRERAMAYAFSHQ 188
             E+A +KRERA+AYAFSHQ
Sbjct:   158 EEATIKRERALAYAFSHQ 175

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

GO:0000394 "RNA splicing, via endonucleolytic cleavage and ligation" evidence=RCA

GO:0009086 "methionine biosynthetic process" evidence=RCA

GO:0048573 "photoperiodism, flowering" evidence=RCA

TAIR|locus:2086385 IQD10 "AT3G15050" [Arabidopsis thaliana (taxid:3702)]

 Score = 391 (142.7 bits), Expect = 2.7e-36, P = 2.7e-36
 Identities = 76/129 (58%), Positives = 98/129 (75%)

Query:    60 DVAAIRIQTAFRAYKARKTFRRLKGTIRLQGVSQRHSVQKQATTTLSYLHTWSKLQAEIR 119
             +VA IRIQ AFRA+KARK    LK   R   + Q H+V  Q +T L+ +H+W  +Q +IR
Sbjct:    50 EVAVIRIQKAFRAFKARKRLCSLKSARRFNSLIQGHTVMNQTSTALNVIHSWYDIQNQIR 109

Query:   120 ARRLCMVKEGRLRQKKLENQLKLDAKLNSLEIDWSGGPETMEEILSRINQREKAAVKRER 179
             ARRL MV +GRL+ K+LEN+LKL+ KL+ LE++W GG ETMEEIL++I Q+E+A VKRER
Sbjct:   110 ARRLYMVTQGRLQHKRLENRLKLEIKLHELEVEWCGGSETMEEILAKIQQKEEATVKRER 169

Query:   180 AMAYAFSHQ 188
             AMAYAFSHQ
Sbjct:   170 AMAYAFSHQ 178

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0010413 "glucuronoxylan metabolic process" evidence=RCA

GO:0045492 "xylan biosynthetic process" evidence=RCA

TAIR|locus:2090409 IQD5 "AT3G22190" [Arabidopsis thaliana (taxid:3702)]

 Score = 265 (98.3 bits), Expect = 1.1e-22, P = 1.1e-22
 Identities = 56/132 (42%), Positives = 86/132 (65%)

Query:    59 EDVAAIRIQTAFRAYKARKTFRRLKGTIRLQGVSQRHSVQKQATTTLSYLHTWSKLQAEI 118
             E+ AA RIQTA+R + AR+  R LKG +RLQ + + H+V+KQA  TL  +    ++QA +
Sbjct:    87 ENRAATRIQTAYRGFLARRALRALKGLVRLQALVRGHAVRKQAAVTLRCMQALVRVQARV 146

Query:   119 RARR--LCMVKEGRLRQKKLENQLKLDAKLNSLEIDWSGGPETMEEILSRINQREKAAVK 176
             RARR  L +  E    Q+ L+ QL  +A++  +E  W     ++E+I +++ +R++AA K
Sbjct:   147 RARRVRLALELESETSQQTLQQQLADEARVREIEEGWCDSIGSVEQIQAKLLKRQEAAAK 206

Query:   177 RERAMAYAFSHQ 188
             RERAMAYA +HQ
Sbjct:   207 RERAMAYALTHQ 218

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2057459 IQD6 "AT2G26180" [Arabidopsis thaliana (taxid:3702)]

 Score = 258 (95.9 bits), Expect = 6.7e-22, P = 6.7e-22
 Identities = 58/131 (44%), Positives = 84/131 (64%)

Query:    59 EDVAAIRIQTAFRAYKARKTFRRLKGTIRLQGVSQRHSVQKQATTTLSYLHTWSKLQAEI 118
             E+ AAIRIQTAFR + AR+  R LKG +RLQ + +   V+KQA  TL  +    ++QA +
Sbjct:    83 EEWAAIRIQTAFRGFLARRALRALKGIVRLQALVRGRQVRKQAAVTLRCMQALVRVQARV 142

Query:   119 RARRLCMVKEGRLRQKKL-ENQLKLDAKLNSLEIDWSGGPETMEEILSRINQREKAAVKR 177
             RARR+ M  EG+  QK L E++ K D  L  +E  W     T+++I S++ QR++ A KR
Sbjct:   143 RARRVRMTVEGQAVQKLLDEHRTKSDL-LKEVEEGWCDRKGTVDDIKSKLQQRQEGAFKR 201

Query:   178 ERAMAYAFSHQ 188
             ERA+AYA + +
Sbjct:   202 ERALAYALAQK 212

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

TAIR|locus:2097478 IQD13 "AT3G59690" [Arabidopsis thaliana (taxid:3702)]

 Score = 250 (93.1 bits), Expect = 1.3e-20, P = 1.3e-20
 Identities = 53/131 (40%), Positives = 86/131 (65%)

Query:    58 VEDVAAIRIQTAFRAYKARKTFRRLKGTIRLQGVSQRHSVQKQATTTLSYLHTWSKLQAE 117
             V++  AI+IQ AFR Y AR++FR LKG +RLQGV + HSV++Q    + Y+    ++Q +
Sbjct:   167 VKNAYAIKIQAAFRGYMARRSFRALKGLVRLQGVVRGHSVKRQTMNAMKYMQLLVRVQTQ 226

Query:   118 IRARRLCMVKEGRLRQKKLENQLKLDAKLNSLEIDWSGGPETMEEILSRINQREKAAVKR 177
             +++RR+ M+ E R R  K + +L + ++++    DW     T EE   R++++  A +KR
Sbjct:   227 VQSRRIQML-ENRARNDKDDTKL-VSSRMSD---DWDDSVLTKEEKDVRLHRKIDAMIKR 281

Query:   178 ERAMAYAFSHQ 188
             ER+MAYA+SHQ
Sbjct:   282 ERSMAYAYSHQ 292

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0005886 "plasma membrane" evidence=IDA

GO:0010413 "glucuronoxylan metabolic process" evidence=RCA

GO:0045492 "xylan biosynthetic process" evidence=RCA

TAIR|locus:2100504 IQD3 "AT3G52290" [Arabidopsis thaliana (taxid:3702)]

 Score = 236 (88.1 bits), Expect = 2.4e-19, P = 2.4e-19
 Identities = 48/134 (35%), Positives = 87/134 (64%)

Query:    55 GMPVEDVAAIRIQTAFRAYKARKTFRRLKGTIRLQGVSQRHSVQKQATTTLSYLHTWSKL 114
             G  +E++AAI+IQTAFR Y AR+  R L+G +RL+ + Q   V++QAT+TL  + T +++
Sbjct:   103 GKSMEEIAAIKIQTAFRGYMARRALRALRGLVRLKSLVQGKCVRRQATSTLQSMQTLARV 162

Query:   115 QAEIRARRLCMVKEGRLRQKKLENQLKLDAKLNSLEIDWSGGPETMEEILSRINQREKAA 174
             Q +IR RRL + ++ +   ++L+ +   D   +    +W+    + E++ + +  ++ A 
Sbjct:   163 QYQIRERRLRLSEDKQALTRQLQQKHNKD--FDKTGENWNDSTLSREKVEANMLNKQVAT 220

Query:   175 VKRERAMAYAFSHQ 188
             ++RE+A+AYAFSHQ
Sbjct:   221 MRREKALAYAFSHQ 234

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2143503 iqd2 "AT5G03040" [Arabidopsis thaliana (taxid:3702)]

 Score = 235 (87.8 bits), Expect = 3.9e-19, P = 3.9e-19
 Identities = 51/135 (37%), Positives = 88/135 (65%)

Query:    55 GMPVEDVAAIRIQTAFRAYKARKTFRRLKGTIRLQGVSQRHSVQKQATTTLSYLHTWSKL 114
             G   E+ AAI IQT FR Y AR+  R ++G +RL+ + +   V++QA  TL  + T S++
Sbjct:   110 GKSNEEAAAILIQTIFRGYLARRALRAMRGLVRLKLLMEGSVVKRQAANTLKCMQTLSRV 169

Query:   115 QAEIRARRLCMVKEGRLRQKKL-ENQLKLDAKLNSLEIDWSGGPETMEEILSRINQREKA 173
             Q++IRARR+ M +E + RQK+L +   K  A L + + +W+   ++ E++ + +  + +A
Sbjct:   170 QSQIRARRIRMSEENQARQKQLLQKHAKELAGLKNGD-NWNDSIQSKEKVEANLLSKYEA 228

Query:   174 AVKRERAMAYAFSHQ 188
              ++RERA+AY++SHQ
Sbjct:   229 TMRRERALAYSYSHQ 243

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

GO:0006007 "glucose catabolic process" evidence=RCA

GO:0048767 "root hair elongation" evidence=RCA

TAIR|locus:2043959 IQD14 "AT2G43680" [Arabidopsis thaliana (taxid:3702)]

 Score = 225 (84.3 bits), Expect = 1.2e-17, P = 1.2e-17
 Identities = 51/133 (38%), Positives = 82/133 (61%)

Query:    56 MPVEDVAAIRIQTAFRAYKARKTFRRLKGTIRLQGVSQRHSVQKQATTTLSYLHTWSKLQ 115
             +PV+  +A +IQ AFR Y ARK+FR LKG +RLQGV + +SV++Q    + Y+    ++Q
Sbjct:   319 LPVQHASATKIQGAFRGYMARKSFRALKGLVRLQGVVRGYSVKRQTINAMKYMQQVVRVQ 378

Query:   116 AEIRARRLCMVKEGRLRQKKLENQLKLDAKLNSLEIDWSGGPETMEEILSRINQREKAAV 175
             ++I++RR+ M+ E + + +K E +       N    +W     T EE  SR  ++  A +
Sbjct:   379 SQIQSRRIKML-ENQAQVEKDEAKWAASEAGND---NWDDSVLTKEERDSRSQRKTDAII 434

Query:   176 KRERAMAYAFSHQ 188
             KRER+MAYA+S +
Sbjct:   435 KRERSMAYAYSRK 447

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2018837 IQD7 "AT1G17480" [Arabidopsis thaliana (taxid:3702)]

 Score = 211 (79.3 bits), Expect = 8.1e-17, P = 8.1e-17
 Identities = 44/128 (34%), Positives = 74/128 (57%)

Query:    62 AAIRIQTAFRAYKARKTFRRLKGTIRLQGVSQRHSVQKQATTTLSYLHTWSKLQAEIRAR 121
             A+ RIQ AFRA+ AR+ FR LK  +R+Q + +   V+KQA  TL  +    ++Q+ +RA 
Sbjct:    96 ASTRIQAAFRAFLARQAFRALKAVVRIQAIFRGRQVRKQAAVTLRCMQALVRVQSRVRAH 155

Query:   122 RLCMVKEGRLRQKKLENQLKLDAKLNSLEIDWSGGPETMEEILSRINQREKAAVKRERAM 181
             R           +   + L+L   +   E  W G P +++E+ +++  +++ A+KRERAM
Sbjct:   156 R-----------RAPSDSLELKDPVKQTEKGWCGSPRSIKEVKTKLQMKQEGAIKRERAM 204

Query:   182 AYAFSHQT 189
              YA +HQ+
Sbjct:   205 VYALTHQS 212

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2030225 iqd8 "AT1G72670" [Arabidopsis thaliana (taxid:3702)]

 Score = 212 (79.7 bits), Expect = 9.6e-17, P = 9.6e-17
 Identities = 47/127 (37%), Positives = 72/127 (56%)

Query:    62 AAIRIQTAFRAYKARKTFRRLKGTIRLQGVSQRHSVQKQATTTLSYLHTWSKLQAEIRAR 121
             AA RIQ AFRA+ AR+  R LK  +R+Q + +   V+KQA  TL  +    ++QA +RA 
Sbjct:    95 AATRIQAAFRAFLARQALRALKAVVRIQAIFRGRQVRKQADVTLRCMQALVRVQARVRAH 154

Query:   122 RLCMVKEGRLRQKKLENQLKLDAKLNSLEIDWSGGPETMEEILSRINQREKAAVKRERAM 181
                   +G+  +K  + Q    AK    E  W   P ++ E+ +++  R++ A+KRERAM
Sbjct:   155 CNRGPSDGQELEKPSDQQKDDPAK--QAEKGWCDSPGSINEVRTKLQMRQEGAIKRERAM 212

Query:   182 AYAFSHQ 188
              YA +HQ
Sbjct:   213 VYALTHQ 219

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0000226 "microtubule cytoskeleton organization" evidence=RCA

GO:0000911 "cytokinesis by cell plate formation" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	189
PF00612	21	IQ: IQ calmodulin-binding motif; InterPro: IPR0000	98.24
smart00015	26	IQ Short calmodulin-binding motif containing conse	97.79
KOG0160	862	consensus Myosin class V heavy chain [Cytoskeleton	97.51
KOG0520	975	consensus Uncharacterized conserved protein, conta	97.07
KOG0160	862	consensus Myosin class V heavy chain [Cytoskeleton	96.69
PTZ00014	821	myosin-A; Provisional	96.46
PF00612	21	IQ: IQ calmodulin-binding motif; InterPro: IPR0000	94.41
COG5022	1463	Myosin heavy chain [Cytoskeleton]	93.85
KOG2128	1401	consensus Ras GTPase-activating protein family - I	92.46
KOG0164	1001	consensus Myosin class I heavy chain [Cytoskeleton	91.53
smart00015	26	IQ Short calmodulin-binding motif containing conse	91.1
KOG0520	975	consensus Uncharacterized conserved protein, conta	90.27
KOG4427	1096	consensus E3 ubiquitin protein ligase [Posttransla	88.57
PTZ00014	821	myosin-A; Provisional	85.29
KOG0942	1001	consensus E3 ubiquitin protein ligase [Posttransla	83.35

>PF00612 IQ: IQ calmodulin-binding motif; InterPro: IPR000048 The IQ motif is an extremely basic unit of about 23 amino acids, whose conserved core usually fits the consensus A-x(3)-I-Q-x(2)-F-R-x(4)-K-K

Probab=98.24  E-value=1.3e-06  Score=48.82  Aligned_cols=21  Identities=48%  Similarity=0.680  Sum_probs=19.1

Q ss_pred             HHHHHHHHHHhhhhHHHHHHH
Q 029691           60 DVAAIRIQTAFRAYKARKTFR   80 (189)
Q Consensus        60 e~AAi~IQsafRGylaRr~~~   80 (189)
                      +.|||.||+.||||++|+.|+
T Consensus         1 ~~aai~iQ~~~R~~~~Rk~~k   21 (21)
T PF00612_consen    1 RKAAIIIQSYWRGYLARKRYK   21 (21)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHhcC
Confidence            469999999999999999884

The IQ motif, which can be present in one or more copies, serves as a binding site for different EF-hand proteins including the essential and regulatory myosin light chains, calmodulin (CaM), and CaM-like proteins [, ].Many IQ motifs are protein kinase C (PKC) phosphorylation sites [, ]. Resolution of the 3D structure of scallop myosin has shown that the IQ motif forms a basic amphipathic helix []. Some proteins known to contain an IQ motif are listed below: A number of conventional and unconventional myosins. Neuromodulin (GAP-43). This protein is associated with nerve growth. It is a major component of the motile "growth cones" that form the tips of elongating axons. Neurogranin (NG/p17). Acts as a "third messenger" substrate of protein kinase C-mediated molecular cascades during synaptic development and remodeling. Sperm surface protein Sp17. Ras GTPase-activating-like protein IQGAP1. IQGAP1 contains 4 IQ motifs. This entry covers the entire IQ motif.; GO: 0005515 protein binding; PDB: 2DFS_A 2IX7_C 1OE9_A 1W7J_A 1W7I_A 1KQM_A 1KK7_A 1WDC_A 1DFL_A 1B7T_A ....

>smart00015 IQ Short calmodulin-binding motif containing conserved Ile and Gln residues

Probab=97.79  E-value=2.3e-05  Score=45.75  Aligned_cols=22  Identities=50%  Similarity=0.662  Sum_probs=20.0

Q ss_pred             hHHHHHHHHHHhhhhHHHHHHH
Q 029691           59 EDVAAIRIQTAFRAYKARKTFR   80 (189)
Q Consensus        59 ee~AAi~IQsafRGylaRr~~~   80 (189)
                      ++.||+.||+.||||++|+.|.
T Consensus         2 ~~~aa~~IQa~~Rg~~~r~~y~   23 (26)
T smart00015        2 LTRAAIIIQAAWRGYLARKRYK   23 (26)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhh
Confidence            5789999999999999999984

Calmodulin-binding motif.

>KOG0160 consensus Myosin class V heavy chain [Cytoskeleton]

Probab=97.51  E-value=0.00025  Score=71.23  Aligned_cols=62  Identities=26%  Similarity=0.241  Sum_probs=48.4

Q ss_pred             hHHHHHHHHHHhhhhHHHHHHHhhh-hhhhhhhhhhchHHHHHHHHhhhHHhHHHHHHHHHHHHHhh
Q 029691           59 EDVAAIRIQTAFRAYKARKTFRRLK-GTIRLQGVSQRHSVQKQATTTLSYLHTWSKLQAEIRARRLC  124 (189)
Q Consensus        59 ee~AAi~IQsafRGylaRr~~~~lk-~vvrLQal~RG~~vRrq~~~tlr~~~A~v~IQs~iR~~r~~  124 (189)
                      ...+++.||+.||||+.|+.|..++ +++.+|+.+||.++|+..   . ...|++.||..+|++..+
T Consensus       672 l~~~~~~iq~~~r~~~~r~~f~~~r~~~~~~Q~~~rG~~~r~~~---~-~~~aai~~q~~~r~~~~r  734 (862)
T KOG0160|consen  672 LSAAKVLIQRQIRGYLARKKFLQLRSAVIIIQAYSRGVLARRET---E-REAAAIGIQKECRSYLNR  734 (862)
T ss_pred             HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhh---H-HHHHHHHhHHHHHHHHHH
Confidence            4567888999999999999999655 788999999999999821   1 446667777777666543

>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]

Probab=97.07  E-value=0.0015  Score=66.41  Aligned_cols=70  Identities=26%  Similarity=0.376  Sum_probs=57.8

Q ss_pred             hHHHHHHHHHHhhhhHHHHHHHhhh-hhhhhhhhhhchHHHHHHHHhh-------hHHhHHHHHHHHHHHHHhhhhhh
Q 029691           59 EDVAAIRIQTAFRAYKARKTFRRLK-GTIRLQGVSQRHSVQKQATTTL-------SYLHTWSKLQAEIRARRLCMVKE  128 (189)
Q Consensus        59 ee~AAi~IQsafRGylaRr~~~~lk-~vvrLQal~RG~~vRrq~~~tl-------r~~~A~v~IQs~iR~~r~~m~~e  128 (189)
                      ...||..||.-||||+.|+.|..++ -+|++|+.+||+.+|++|....       +.+-+|-++|+.+|++..+-..|
T Consensus       809 ~~~aa~~iq~~f~~yk~r~~~l~tr~p~v~iqa~~rg~q~r~dy~ki~wSv~~lek~~lrwR~k~~g~Rgfk~~~~~e  886 (975)
T KOG0520|consen  809 DPAAASRIQKKFRGYKQRKEFLSTRQPIVKIQAAVRGYQVRKDYRKITWSVGVLEKLILRWRRKGKGFRGFKGRALFE  886 (975)
T ss_pred             chhHHHHhhhhhhhHHhhhhhcccCCccccchhhhhchhHhhhhheechhhhHHHHHHHHHHHhhhhhcccccccchh
Confidence            3469999999999999999999655 7999999999999999997332       24567888999999988765543

>KOG0160 consensus Myosin class V heavy chain [Cytoskeleton]

Probab=96.69  E-value=0.0042  Score=62.67  Aligned_cols=66  Identities=20%  Similarity=0.092  Sum_probs=55.8

Q ss_pred             chhHHHHHHHHHHhhhhHHHHHHHhhhhhhhhhhhhhchHHHHHHHHhhhHHhHHHHHHHHHHHHHhhh
Q 029691           57 PVEDVAAIRIQTAFRAYKARKTFRRLKGTIRLQGVSQRHSVQKQATTTLSYLHTWSKLQAEIRARRLCM  125 (189)
Q Consensus        57 ~ree~AAi~IQsafRGylaRr~~~~lk~vvrLQal~RG~~vRrq~~~tlr~~~A~v~IQs~iR~~r~~m  125 (189)
                      +....+++.||+.+||+++|+........+.+|..+|++..|++|...   ..+++.+|+.+|+..++.
T Consensus       693 ~~~r~~~~~~Q~~~rG~~~r~~~~~~~aai~~q~~~r~~~~r~~y~~~---~~~~~~~qs~~r~~~~r~  758 (862)
T KOG0160|consen  693 LQLRSAVIIIQAYSRGVLARRETEREAAAIGIQKECRSYLNRRRYRAL---IPASITIQSGVRAMLARN  758 (862)
T ss_pred             HHHHHHHHHHhhhhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHhcc
Confidence            456789999999999999998333445788999999999999999443   479999999999999876

>PTZ00014 myosin-A; Provisional

Probab=96.46  E-value=0.0033  Score=63.18  Aligned_cols=41  Identities=20%  Similarity=0.307  Sum_probs=35.8

Q ss_pred             HHHHHHHHHhhhhHHHHHHHh-hhhhhhhhhhhhchHHHHHH
Q 029691           61 VAAIRIQTAFRAYKARKTFRR-LKGTIRLQGVSQRHSVQKQA  101 (189)
Q Consensus        61 ~AAi~IQsafRGylaRr~~~~-lk~vvrLQal~RG~~vRrq~  101 (189)
                      ..++.||++||||++|+.|.. ..++++||+.+||+++++..
T Consensus       778 ~~~~~iq~~~r~~~~r~~~~~~~~~~~~iQ~~~R~~l~~~~~  819 (821)
T PTZ00014        778 PLVSVLEALILKIKKKRKVRKNIKSLVRIQAHLRRHLVIAEI  819 (821)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            368899999999999999995 55899999999999998753

>PF00612 IQ: IQ calmodulin-binding motif; InterPro: IPR000048 The IQ motif is an extremely basic unit of about 23 amino acids, whose conserved core usually fits the consensus A-x(3)-I-Q-x(2)-F-R-x(4)-K-K

Probab=94.41  E-value=0.028  Score=31.06  Aligned_cols=19  Identities=21%  Similarity=0.137  Sum_probs=15.7

Q ss_pred             hhhhhhhhhhhchHHHHHH
Q 029691           83 KGTIRLQGVSQRHSVQKQA  101 (189)
Q Consensus        83 k~vvrLQal~RG~~vRrq~  101 (189)
                      ++++.||+.+||+++|+++
T Consensus         2 ~aai~iQ~~~R~~~~Rk~~   20 (21)
T PF00612_consen    2 KAAIIIQSYWRGYLARKRY   20 (21)
T ss_dssp             HHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhc
Confidence            4678889999999998876

The IQ motif, which can be present in one or more copies, serves as a binding site for different EF-hand proteins including the essential and regulatory myosin light chains, calmodulin (CaM), and CaM-like proteins [, ].Many IQ motifs are protein kinase C (PKC) phosphorylation sites [, ]. Resolution of the 3D structure of scallop myosin has shown that the IQ motif forms a basic amphipathic helix []. Some proteins known to contain an IQ motif are listed below: A number of conventional and unconventional myosins. Neuromodulin (GAP-43). This protein is associated with nerve growth. It is a major component of the motile "growth cones" that form the tips of elongating axons. Neurogranin (NG/p17). Acts as a "third messenger" substrate of protein kinase C-mediated molecular cascades during synaptic development and remodeling. Sperm surface protein Sp17. Ras GTPase-activating-like protein IQGAP1. IQGAP1 contains 4 IQ motifs. This entry covers the entire IQ motif.; GO: 0005515 protein binding; PDB: 2DFS_A 2IX7_C 1OE9_A 1W7J_A 1W7I_A 1KQM_A 1KK7_A 1WDC_A 1DFL_A 1B7T_A ....

>COG5022 Myosin heavy chain [Cytoskeleton]

Probab=93.85  E-value=0.13  Score=54.62  Aligned_cols=63  Identities=24%  Similarity=0.261  Sum_probs=47.8

Q ss_pred             hHHHHHHHHHHhhhhHHHHHHH-hhhhhhhhhhhhhchHHHHHHHHhhhHHhHHHHHHHHHHHHH
Q 029691           59 EDVAAIRIQTAFRAYKARKTFR-RLKGTIRLQGVSQRHSVQKQATTTLSYLHTWSKLQAEIRARR  122 (189)
Q Consensus        59 ee~AAi~IQsafRGylaRr~~~-~lk~vvrLQal~RG~~vRrq~~~tlr~~~A~v~IQs~iR~~r  122 (189)
                      -...|+.||++|||+..|++|. .++.+..+|...+|..+++.+...+. .....++|..++...
T Consensus       744 ~~~~~~~iq~aiR~~~~rrr~~~~~k~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~  807 (1463)
T COG5022         744 LDNIATRIQRAIRGRYLRRRYLQALKRIKKIQVIQHGFRLRRLVDYELK-WRLFIKLQPLLSLLG  807 (1463)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhhcccchH-HHhHHHhhHHhHHHh
Confidence            4568999999999999999998 67788888888888888876543332 356667777665543

>KOG2128 consensus Ras GTPase-activating protein family - IQGAP [Signal transduction mechanisms]

Probab=92.46  E-value=0.26  Score=52.11  Aligned_cols=66  Identities=17%  Similarity=0.198  Sum_probs=52.5

Q ss_pred             hHHHHHHHHHHhhhhHH---HHHHH--hhhhhhhhhhhhhchHHHHHHHHh----hhHHhHHHHHHHHHHHHHhh
Q 029691           59 EDVAAIRIQTAFRAYKA---RKTFR--RLKGTIRLQGVSQRHSVQKQATTT----LSYLHTWSKLQAEIRARRLC  124 (189)
Q Consensus        59 ee~AAi~IQsafRGyla---Rr~~~--~lk~vvrLQal~RG~~vRrq~~~t----lr~~~A~v~IQs~iR~~r~~  124 (189)
                      ..-..+.||.++|||+.   +..+.  ..+-+|.+|++.||+++|+.+...    ..++.+.+.||+.+|.+..+
T Consensus       564 ~~P~~~diq~~vr~~~~~~~~~~~~~~~~~evv~~qs~~R~~lsrk~~~~~~q~~~~~~~~~i~iqs~~r~f~~r  638 (1401)
T KOG2128|consen  564 QTPFVVDIQALVRGILQYIPRDVYLDSAKKEVVKFQSLTRGALSRKKYSRKLQYFKDNMTKIIKIQSKIRKFPNR  638 (1401)
T ss_pred             cCchHHHHHHHHHHHhhhchHHHHHHHhhHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhhhHHHHHHHHHhcccc
Confidence            34468899999999994   22333  356799999999999999988733    35899999999999998764

>KOG0164 consensus Myosin class I heavy chain [Cytoskeleton]

Probab=91.53  E-value=0.38  Score=48.49  Aligned_cols=24  Identities=33%  Similarity=0.602  Sum_probs=21.5

Q ss_pred             HHHHHHHHHhhhhHHHHHHHhhhh
Q 029691           61 VAAIRIQTAFRAYKARKTFRRLKG   84 (189)
Q Consensus        61 ~AAi~IQsafRGylaRr~~~~lk~   84 (189)
                      .-|+.||++|||+++|..|+.++.
T Consensus       697 ~lvtllQK~~RG~~~R~ry~rmka  720 (1001)
T KOG0164|consen  697 SLVTLLQKAWRGWLARQRYRRMKA  720 (1001)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH
Confidence            578999999999999999997764

>smart00015 IQ Short calmodulin-binding motif containing conserved Ile and Gln residues

Probab=91.10  E-value=0.15  Score=29.42  Aligned_cols=19  Identities=16%  Similarity=0.151  Sum_probs=16.4

Q ss_pred             hhhhhhhhhhhchHHHHHH
Q 029691           83 KGTIRLQGVSQRHSVQKQA  101 (189)
Q Consensus        83 k~vvrLQal~RG~~vRrq~  101 (189)
                      +.++.||+.+||+++|+.+
T Consensus         4 ~aa~~IQa~~Rg~~~r~~y   22 (26)
T smart00015        4 RAAIIIQAAWRGYLARKRY   22 (26)
T ss_pred             HHHHHHHHHHHHHHHHHhh
Confidence            4678899999999999987

Calmodulin-binding motif.

>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]

Probab=90.27  E-value=0.73  Score=47.50  Aligned_cols=64  Identities=19%  Similarity=0.208  Sum_probs=45.2

Q ss_pred             HHHHHHHHHhhhhHHHHHHHhh-hhhh----------hhhhhhhchHHHHHH----------------------HHhhhH
Q 029691           61 VAAIRIQTAFRAYKARKTFRRL-KGTI----------RLQGVSQRHSVQKQA----------------------TTTLSY  107 (189)
Q Consensus        61 ~AAi~IQsafRGylaRr~~~~l-k~vv----------rLQal~RG~~vRrq~----------------------~~tlr~  107 (189)
                      .=+|+||+++|||..|+.|..+ .++-          ++|.-+||+..|.-.                      ....+-
T Consensus       834 ~p~v~iqa~~rg~q~r~dy~ki~wSv~~lek~~lrwR~k~~g~Rgfk~~~~~e~~~~a~t~~e~~yd~yKq~~~~~~~r~  913 (975)
T KOG0520|consen  834 QPIVKIQAAVRGYQVRKDYRKITWSVGVLEKLILRWRRKGKGFRGFKGRALFEEQETAATVIEDCYDFYKQLRKQTEERL  913 (975)
T ss_pred             CccccchhhhhchhHhhhhheechhhhHHHHHHHHHHHhhhhhcccccccchhccccccchHHHHHHHHHHHHHHHHHHH
Confidence            3478999999999999998832 2311          457778887666522                      123344


Q ss_pred             HhHHHHHHHHHHHHHhh
Q 029691          108 LHTWSKLQAEIRARRLC  124 (189)
Q Consensus       108 ~~A~v~IQs~iR~~r~~  124 (189)
                      -+|+++||+.+|....+
T Consensus       914 ~~A~~~VQsm~rs~~a~  930 (975)
T KOG0520|consen  914 TRAVVRVQSMFRSPKAQ  930 (975)
T ss_pred             HHHHHHHHHHhcCHHHH
Confidence            68999999999988765

>KOG4427 consensus E3 ubiquitin protein ligase [Posttranslational modification, protein turnover, chaperones]

Probab=88.57  E-value=0.45  Score=48.20  Aligned_cols=24  Identities=33%  Similarity=0.447  Sum_probs=21.8

Q ss_pred             chhHHHHHHHHHHhhhhHHHHHHH
Q 029691           57 PVEDVAAIRIQTAFRAYKARKTFR   80 (189)
Q Consensus        57 ~ree~AAi~IQsafRGylaRr~~~   80 (189)
                      .+.+.||+.||..+|||++|+.++
T Consensus        27 rrr~~aa~~iq~~lrsyl~Rkk~~   50 (1096)
T KOG4427|consen   27 RRREAAALFIQRVLRSYLVRKKAQ   50 (1096)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH
Confidence            356789999999999999999987

>PTZ00014 myosin-A; Provisional

Probab=85.29  E-value=1.8  Score=43.92  Aligned_cols=38  Identities=11%  Similarity=0.176  Sum_probs=32.1

Q ss_pred             hhhhhhhhhhchHHHHHHHHhhhHHhHHHHHHHHHHHHHhh
Q 029691           84 GTIRLQGVSQRHSVQKQATTTLSYLHTWSKLQAEIRARRLC  124 (189)
Q Consensus        84 ~vvrLQal~RG~~vRrq~~~tlr~~~A~v~IQs~iR~~r~~  124 (189)
                      -++.||+.+||+++|+.+.   +..++++.||+.+|++..+
T Consensus       779 ~~~~iq~~~r~~~~r~~~~---~~~~~~~~iQ~~~R~~l~~  816 (821)
T PTZ00014        779 LVSVLEALILKIKKKRKVR---KNIKSLVRIQAHLRRHLVI  816 (821)
T ss_pred             HHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHH
Confidence            4568899999999999984   3357999999999998764

>KOG0942 consensus E3 ubiquitin protein ligase [Posttranslational modification, protein turnover, chaperones]

Probab=83.35  E-value=0.81  Score=46.95  Aligned_cols=24  Identities=17%  Similarity=0.495  Sum_probs=21.2

Q ss_pred             chhHHHHHHHHHHhhhhHHHHHHH
Q 029691           57 PVEDVAAIRIQTAFRAYKARKTFR   80 (189)
Q Consensus        57 ~ree~AAi~IQsafRGylaRr~~~   80 (189)
                      .+++.+|+.||+.||||++|++..
T Consensus        26 rk~e~~av~vQs~~Rg~~~r~~~~   49 (1001)
T KOG0942|consen   26 RKQEKNAVKVQSFWRGFRVRHNQK   49 (1001)
T ss_pred             HHHhccchHHHHHHHHHHHHHHHH
Confidence            456789999999999999999866

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	189
2dfs_A	1080	Myosin-5A; myosin-V, inhibited state, cryoelectron	1e-04
1g8x_A	1010	Myosin II heavy chain fused to alpha-actinin 3; mo	2e-04
1g8x_A	1010	Myosin II heavy chain fused to alpha-actinin 3; mo	7e-04
1qzv_F	154	Plant photosystem I: subunit PSAF; photosynthesis,	4e-04
2ycu_A	995	Non muscle myosin 2C, alpha-actinin; motor protein	4e-04

>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080

 Score = 40.9 bits (96), Expect = 1e-04
 Identities = 23/136 (16%), Positives = 47/136 (34%), Gaps = 16/136 (11%)

Query: 62  AAIRIQTAFRAYKARKTFRRLKGTIRLQGVSQRHSVQKQATTTLSYLHTWSKLQAEIR-- 119
           AAI IQ   R Y  RK ++ ++          R  + +     +   H    +Q  +R  
Sbjct: 818 AAIIIQKFQRMYVVRKRYQCMRDATIALQALLRGYLVRNKYQMMLREHKSIIIQKHVRGW 877

Query: 120 ------------ARRLCMVKEGRLRQKKLENQLKLDAKLNSLEIDWSGGPET-MEEILSR 166
                          L       + +++L+  LK++A+          G E  + ++  +
Sbjct: 878 LARVHYHRTLKAIVYLQCCYRRMMAKRELKK-LKIEARSVERYKKLHIGLENKIMQLQRK 936

Query: 167 INQREKAAVKRERAMA 182
           I+++ K        M 
Sbjct: 937 IDEQNKEYKSLLEKMN 952

>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1 Length = 1010

 Score = 40.0 bits (94), Expect = 2e-04
 Identities = 15/124 (12%), Positives = 37/124 (29%), Gaps = 10/124 (8%)

Query: 61  VAAIRIQTAFRAYKARKTFRRL---KGTIRLQGVSQRHSVQKQATTTLSYLHTWSKLQAE 117
            +   +Q+   A+K  K   +    +    L+ +      + +      ++        E
Sbjct: 796 DSIESVQSFMNAHKEYKKTEKPPKGQEVSELEAIYNSLQTKLRLIKREPFVAPAGLTPNE 855

Query: 118 IRARRLCMVKEGRLRQKKLENQLKLDAKLNSLEIDWSGGPETMEEILSRINQREKAAVKR 177
           I +    + K  +   + L  +LK   K+  L        +    IL ++          
Sbjct: 856 IDSTWSALEKAEQEHAEALRIELKRQKKIAVLL-------QKYNRILKKLENWATTKSVY 908

Query: 178 ERAM 181
             + 
Sbjct: 909 LGSN 912

>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1 Length = 1010

 Score = 38.5 bits (90), Expect = 7e-04
 Identities = 18/125 (14%), Positives = 35/125 (28%), Gaps = 4/125 (3%)

Query: 62  AAIRIQTAFRAYKARKTFRRLKGTIRLQGVSQRH-SVQKQATTTLSY--LHTWSKLQAEI 118
              +     RA +  +     + ++  +       SVQ        Y       K Q   
Sbjct: 765 EQTKSDYLKRANELVQWINDKQASLESRDFGDSIESVQSFMNAHKEYKKTEKPPKGQEVS 824

Query: 119 RARRLCMVKEGRLRQKKLENQL-KLDAKLNSLEIDWSGGPETMEEILSRINQREKAAVKR 177
               +    + +LR  K E  +       N ++  WS   +  +E    +    K   K 
Sbjct: 825 ELEAIYNSLQTKLRLIKREPFVAPAGLTPNEIDSTWSALEKAEQEHAEALRIELKRQKKI 884

Query: 178 ERAMA 182
              + 
Sbjct: 885 AVLLQ 889

>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154

 Score = 38.4 bits (88), Expect = 4e-04
 Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 11/35 (31%)

Query: 132 RQ--KKLENQLKLDAKLNS---LEIDWSGGPETME 161
           +Q  KKL+  LKL A  +S   L I       TME
Sbjct: 19  KQALKKLQASLKLYAD-DSAPALAIK-----ATME 47

>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A* Length = 995

 Score = 39.3 bits (92), Expect = 4e-04
 Identities = 14/123 (11%), Positives = 37/123 (30%), Gaps = 10/123 (8%)

Query: 62  AAIRIQTAFRAYKA---RKTFRRLKGTIRLQGVSQRHSVQKQATTTLSYLHTWSKLQAEI 118
           +   +Q+   A+K     +   + +    L+ +      + +      ++        EI
Sbjct: 789 SIESVQSFMNAHKEYKKTEKPPKGQEVSELEAIYNSLQTKLRLIKREPFVAPAGLTPNEI 848

Query: 119 RARRLCMVKEGRLRQKKLENQLKLDAKLNSLEIDWSGGPETMEEILSRINQREKAAVKRE 178
            +    + K  +   + L  +LK   K+  L        +    IL ++           
Sbjct: 849 DSTWSALEKAEQEHAEALRIELKRQKKIAVLL-------QKYNRILKKLENWATTKSVYL 901

Query: 179 RAM 181
            + 
Sbjct: 902 GSN 904

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	189
d1kk8a2	789	Myosin S1, motor domain {Bay scallop (Aequipecten	97.93
d2mysa2	794	Myosin S1, motor domain {Chicken (Gallus gallus),	97.82
d2mysa2	794	Myosin S1, motor domain {Chicken (Gallus gallus),	96.33
d1w7ja2	730	Myosin S1, motor domain {Chicken (Gallus gallus),	95.87
d1kk8a2	789	Myosin S1, motor domain {Bay scallop (Aequipecten	95.34

>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

Probab=97.93  E-value=4e-06  Score=51.97  Aligned_cols=43  Identities=21%  Similarity=0.272  Sum_probs=35.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHCHHHHHHH
Q ss_conf             6899999998744469999888665----454444422033787779
Q 029691           59 EDVAAIRIQTAFRAYKARKTFRRLK----GTIRLQGVSQRHSVQKQA  101 (189)
Q Consensus        59 ee~AAi~IQsafRgylaRr~~~~lk----~ivrLQalvRG~~vRkq~  101 (189)
                      ...+|+.||+.||||++|+.|+.++    .++.+|..+||+++||.+
T Consensus       730 l~~~~~~IQ~~~R~~~~Rk~y~k~r~~~~ai~~iQ~~~R~~~~rr~~  776 (789)
T d1kk8a2         730 LSKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRNW  776 (789)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             99999999999999999999999999999999999999999998036

>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]

Probab=97.82  E-value=7.2e-06  Score=50.50  Aligned_cols=43  Identities=14%  Similarity=0.087  Sum_probs=35.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHCHHHHHHH
Q ss_conf             689999999874446999988866----5454444422033787779
Q 029691           59 EDVAAIRIQTAFRAYKARKTFRRL----KGTIRLQGVSQRHSVQKQA  101 (189)
Q Consensus        59 ee~AAi~IQsafRgylaRr~~~~l----k~ivrLQalvRG~~vRkq~  101 (189)
                      ...+|+.||+.||||++|+.|+.+    ..++.||+.+||+++||.+
T Consensus       734 l~~~~~~IQ~~~Rg~l~Rk~~~~~~~~r~a~~~IQ~~~R~~~~~r~~  780 (794)
T d2mysa2         734 LAEIITATQARCRGFLMRVEYRAMVERRESIFCIQYNVRSFMNVKHW  780 (794)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             99999999999999999999999999999999999999999998236

>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]

Probab=96.33  E-value=0.0049  Score=33.96  Aligned_cols=43  Identities=7%  Similarity=-0.072  Sum_probs=36.7

Q ss_pred             HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             6545444442203378777987666776999998999998765
Q 029691           82 LKGTIRLQGVSQRHSVQKQATTTLSYLHTWSKLQAEIRARRLC  124 (189)
Q Consensus        82 lk~ivrLQalvRG~~vRkq~~~tl~~~~a~v~iQs~iRa~r~~  124 (189)
                      .+.++.+|+.+||+++|+.+...+....|++.||+.+|++..+
T Consensus       735 ~~~~~~IQ~~~Rg~l~Rk~~~~~~~~r~a~~~IQ~~~R~~~~~  777 (794)
T d2mysa2         735 AEIITATQARCRGFLMRVEYRAMVERRESIFCIQYNVRSFMNV  777 (794)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             9999999999999999999999999999999999999999998

>d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Chicken (Gallus gallus), Va isoform [TaxId: 9031]

Probab=95.87  E-value=0.0035  Score=34.82  Aligned_cols=10  Identities=10%  Similarity=0.019  Sum_probs=4.6

Q ss_pred             HHCHHHHHHH
Q ss_conf             2033787779
Q 029691           92 SQRHSVQKQA  101 (189)
Q Consensus        92 vRG~~vRkq~  101 (189)
                      +-...|..|.
T Consensus       611 Fd~~~V~~QL  620 (730)
T d1w7ja2         611 FDEKRAVQQL  620 (730)
T ss_dssp             CCHHHHHHHH
T ss_pred             CCHHHHHHHH
T ss_conf             6879999999

>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

Probab=95.34  E-value=0.023  Score=30.06  Aligned_cols=42  Identities=17%  Similarity=-0.008  Sum_probs=33.9

Q ss_pred             HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             545444442203378777987666776999998999998765
Q 029691           83 KGTIRLQGVSQRHSVQKQATTTLSYLHTWSKLQAEIRARRLC  124 (189)
Q Consensus        83 k~ivrLQalvRG~~vRkq~~~tl~~~~a~v~iQs~iRa~r~~  124 (189)
                      +.++.+|+.+||+.+|+.+........+++.||+.+|++..+
T Consensus       732 ~~~~~IQ~~~R~~~~Rk~y~k~r~~~~ai~~iQ~~~R~~~~r  773 (789)
T d1kk8a2         732 KIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVL  773 (789)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             999999999999999999999999999999999999999998