Citrus Sinensis ID: 029734
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 189 | ||||||
| 224103445 | 189 | predicted protein [Populus trichocarpa] | 1.0 | 1.0 | 0.677 | 1e-72 | |
| 359475272 | 214 | PREDICTED: HVA22-like protein k-like [Vi | 0.899 | 0.794 | 0.672 | 9e-66 | |
| 255556101 | 1157 | pentatricopeptide repeat-containing prot | 0.947 | 0.154 | 0.622 | 8e-61 | |
| 224096944 | 196 | predicted protein [Populus trichocarpa] | 1.0 | 0.964 | 0.571 | 2e-59 | |
| 79497359 | 200 | HVA22-like protein k [Arabidopsis thalia | 0.936 | 0.885 | 0.571 | 2e-57 | |
| 297802284 | 205 | hypothetical protein ARALYDRAFT_912692 [ | 0.941 | 0.868 | 0.564 | 6e-57 | |
| 255568265 | 192 | Receptor expression-enhancing protein, p | 0.962 | 0.947 | 0.565 | 1e-56 | |
| 356545274 | 184 | PREDICTED: HVA22-like protein k-like [Gl | 0.962 | 0.989 | 0.562 | 3e-55 | |
| 195625098 | 196 | receptor expression-enhancing protein 6 | 0.957 | 0.923 | 0.552 | 4e-55 | |
| 358248064 | 193 | uncharacterized protein LOC100811809 [Gl | 0.984 | 0.963 | 0.532 | 2e-54 |
| >gi|224103445|ref|XP_002313060.1| predicted protein [Populus trichocarpa] gi|222849468|gb|EEE87015.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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Score = 278 bits (710), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 128/189 (67%), Positives = 150/189 (79%)
Query: 1 MALSGEVGLRLLLCPIGSNIVVRTACCSVGTILPVYSTFKAIESKDENEKQKWLVYWAVY 60
MA GEVGL+LLL P+ SNIVVRTACCSVG LP+YSTFKAIE+KD+ E+Q+WL+YWA Y
Sbjct: 1 MAFPGEVGLQLLLSPLNSNIVVRTACCSVGIALPIYSTFKAIENKDQIEQQRWLLYWAAY 60
Query: 61 GSFSIAEMFADKILCWFPLYHHVKFAFLVWLQLPSTNGAKYFYMSRLRPFLLRHQARLDQ 120
GSFS+AE+FADKIL WFPLY+H+KFAFLVWLQLPS NGA YMS LRPFLLRHQARLD
Sbjct: 61 GSFSLAEVFADKILSWFPLYYHMKFAFLVWLQLPSANGAGQLYMSHLRPFLLRHQARLDN 120
Query: 121 ILESVNGEMSQFVSDHQVEFRFVRTLFMKTVALVNQTVKEIIHPVPTQANRAIEGPPESI 180
+E + GEM++FVS HQ EFRF + L MK +A VNQ +++I P QAN +GP I
Sbjct: 121 FVEFLYGEMNKFVSAHQAEFRFAKALLMKILASVNQIARDVIRPGGRQANGTFQGPARRI 180
Query: 181 PDSQSDNED 189
DSQSD ED
Sbjct: 181 QDSQSDGED 189
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Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359475272|ref|XP_002280949.2| PREDICTED: HVA22-like protein k-like [Vitis vinifera] gi|297741427|emb|CBI32558.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|255556101|ref|XP_002519085.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223541748|gb|EEF43296.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|224096944|ref|XP_002310796.1| predicted protein [Populus trichocarpa] gi|222853699|gb|EEE91246.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|79497359|ref|NP_195390.2| HVA22-like protein k [Arabidopsis thaliana] gi|57012586|sp|Q6NLY8.1|HA22K_ARATH RecName: Full=HVA22-like protein k; Short=AtHVA22k gi|45752772|gb|AAS76284.1| At4g36720 [Arabidopsis thaliana] gi|332661293|gb|AEE86693.1| HVA22-like protein k [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|297802284|ref|XP_002869026.1| hypothetical protein ARALYDRAFT_912692 [Arabidopsis lyrata subsp. lyrata] gi|297314862|gb|EFH45285.1| hypothetical protein ARALYDRAFT_912692 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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| >gi|255568265|ref|XP_002525107.1| Receptor expression-enhancing protein, putative [Ricinus communis] gi|223535566|gb|EEF37234.1| Receptor expression-enhancing protein, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|356545274|ref|XP_003541069.1| PREDICTED: HVA22-like protein k-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|195625098|gb|ACG34379.1| receptor expression-enhancing protein 6 [Zea mays] gi|219887183|gb|ACL53966.1| unknown [Zea mays] gi|414879781|tpg|DAA56912.1| TPA: Receptor expression-enhancing protein 6 [Zea mays] | Back alignment and taxonomy information |
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| >gi|358248064|ref|NP_001239804.1| uncharacterized protein LOC100811809 [Glycine max] gi|255636485|gb|ACU18581.1| unknown [Glycine max] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 189 | ||||||
| TAIR|locus:2115315 | 200 | HVA22K "AT4G36720" [Arabidopsi | 0.968 | 0.915 | 0.572 | 8.9e-54 | |
| UNIPROTKB|Q00765 | 189 | REEP5 "Receptor expression-enh | 0.661 | 0.661 | 0.382 | 2.6e-22 | |
| RGD|1306047 | 189 | Reep5 "receptor accessory prot | 0.661 | 0.661 | 0.382 | 4.3e-22 | |
| MGI|MGI:1270152 | 185 | Reep5 "receptor accessory prot | 0.661 | 0.675 | 0.382 | 1.1e-21 | |
| UNIPROTKB|Q29RM3 | 189 | REEP5 "Receptor expression-enh | 0.661 | 0.661 | 0.375 | 1.5e-21 | |
| ZFIN|ZDB-GENE-050320-111 | 184 | zgc:101744 "zgc:101744" [Danio | 0.544 | 0.559 | 0.432 | 1.5e-21 | |
| ZFIN|ZDB-GENE-050706-125 | 268 | reep2 "receptor accessory prot | 0.544 | 0.384 | 0.359 | 2.5e-21 | |
| ZFIN|ZDB-GENE-040912-98 | 208 | reep6 "receptor accessory prot | 0.624 | 0.567 | 0.379 | 8e-21 | |
| UNIPROTKB|Q32LG5 | 185 | REEP6 "Receptor expression-enh | 0.539 | 0.551 | 0.407 | 1.5e-19 | |
| UNIPROTKB|A2VE59 | 201 | REEP1 "Uncharacterized protein | 0.544 | 0.512 | 0.388 | 1.9e-19 |
| TAIR|locus:2115315 HVA22K "AT4G36720" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 556 (200.8 bits), Expect = 8.9e-54, P = 8.9e-54
Identities = 107/187 (57%), Positives = 136/187 (72%)
Query: 3 LSGEVGLRLLLCPIGSNIVVRTACCSVGTILPVYSTFKAIESKDENEKQKWLVYWAVYGS 62
L+GEVGLR+L P+ SNIV+RTACCS+G LPVYSTFKAIES DENE+QK L+YWA YGS
Sbjct: 18 LTGEVGLRVLFSPLSSNIVLRTACCSIGIGLPVYSTFKAIESGDENEQQKMLIYWAAYGS 77
Query: 63 FSIAEMFADKILCWFPLYHHVKFAFLVWLQLPSTNGAKYFYMSRLRPFLLRHQARLDQIL 122
FS+ E+F DKI+ WFPLY+HVKFAFLVWLQLP+ G+K Y +++RPFLLRHQAR+DQ++
Sbjct: 78 FSLVEVFTDKIISWFPLYYHVKFAFLVWLQLPTVEGSKQIYNNQIRPFLLRHQARVDQLV 137
Query: 123 ESVNGEMSQFVSDHQVEFRFVRTLFMKTVALVNQTVKEIIHPVPTQANRAIEGPPESIPD 182
+ V GEM + V HQ E RFVR + K + VN+ + AN + S +
Sbjct: 138 DGVYGEMVKVVRSHQGEIRFVRAMIAKILGSVNEDAPRL----GEIANGSPVSETNSDSE 193
Query: 183 SQSDNED 189
S S++ED
Sbjct: 194 SDSNHED 200
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| UNIPROTKB|Q00765 REEP5 "Receptor expression-enhancing protein 5" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| RGD|1306047 Reep5 "receptor accessory protein 5" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
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| MGI|MGI:1270152 Reep5 "receptor accessory protein 5" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q29RM3 REEP5 "Receptor expression-enhancing protein 5" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| ZFIN|ZDB-GENE-050320-111 zgc:101744 "zgc:101744" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
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| ZFIN|ZDB-GENE-050706-125 reep2 "receptor accessory protein 2" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
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| ZFIN|ZDB-GENE-040912-98 reep6 "receptor accessory protein 6" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q32LG5 REEP6 "Receptor expression-enhancing protein 6" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| UNIPROTKB|A2VE59 REEP1 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| fgenesh4_pg.C_LG_IX000518 | hypothetical protein (189 aa) | |||||||
(Populus trichocarpa) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 189 | |||
| pfam03134 | 94 | pfam03134, TB2_DP1_HVA22, TB2/DP1, HVA22 family | 3e-32 | |
| COG5052 | 186 | COG5052, YOP1, Protein involved in membrane traffi | 2e-16 |
| >gnl|CDD|217381 pfam03134, TB2_DP1_HVA22, TB2/DP1, HVA22 family | Back alignment and domain information |
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Score = 111 bits (279), Expect = 3e-32
Identities = 41/93 (44%), Positives = 56/93 (60%)
Query: 19 NIVVRTACCSVGTILPVYSTFKAIESKDENEKQKWLVYWAVYGSFSIAEMFADKILCWFP 78
I R +G + P Y+++KA+ESKD+ + +WL YW VY ++ E F+D IL W P
Sbjct: 2 GIGARLLSNLIGFLYPAYASYKALESKDKEDDTQWLTYWVVYSFLTLFESFSDIILSWIP 61
Query: 79 LYHHVKFAFLVWLQLPSTNGAKYFYMSRLRPFL 111
Y+ +K FLVWL LP T GA Y Y +RP L
Sbjct: 62 FYYELKLLFLVWLVLPKTQGASYIYDKFIRPLL 94
|
This family includes members from a wide variety of eukaryotes. It includes the TB2/DP1 (deleted in polyposis) protein, which in humans is deleted in severe forms of familial adenomatous polyposis, an autosomal dominant oncological inherited disease. The family also includes the plant protein of known similarity to TB2/DP1, the HVA22 abscisic acid-induced protein, which is thought to be a regulatory protein. Length = 94 |
| >gnl|CDD|227385 COG5052, YOP1, Protein involved in membrane traffic [Intracellular trafficking and secretion] | Back alignment and domain information |
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Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 189 | |||
| KOG1726 | 225 | consensus HVA22/DP1 gene product-related proteins | 100.0 | |
| KOG1725 | 186 | consensus Protein involved in membrane traffic (YO | 99.97 | |
| PF03134 | 94 | TB2_DP1_HVA22: TB2/DP1, HVA22 family; InterPro: IP | 99.97 | |
| COG5052 | 186 | YOP1 Protein involved in membrane traffic [Intrace | 99.89 |
| >KOG1726 consensus HVA22/DP1 gene product-related proteins [Defense mechanisms] | Back alignment and domain information |
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Probab=100.00 E-value=1.9e-33 Score=237.62 Aligned_cols=130 Identities=34% Similarity=0.734 Sum_probs=117.2
Q ss_pred HHhhhhhhhccccHHHHHHHhhc--CChhhhhhHHHHHHHHHHHHHHHHHHHHHhchhhhHHHHHHHHHHHHhcCCCcch
Q 029734 22 VRTACCSVGTILPVYSTFKAIES--KDENEKQKWLVYWAVYGSFSIAEMFADKILCWFPLYHHVKFAFLVWLQLPSTNGA 99 (189)
Q Consensus 22 ~r~~~~~iG~~yPaY~S~kal~~--~~~~~~~~WL~YWivya~~~~~E~~~d~ll~wiP~Y~~~Kl~fllwL~~P~t~GA 99 (189)
.|++.+++|.+||||+|+|++++ ++-++..+|++|||+||+++++|.++|.+++|+|||+++|++|++||++|.|+|+
T Consensus 2 ~~~lv~v~G~~yPAy~tyKavk~~~~~i~el~~W~~YWIv~A~~t~~e~~~d~~lsw~P~Y~e~Kl~fv~wL~~p~t~G~ 81 (225)
T KOG1726|consen 2 IRLLVLVFGYAYPAYATYKAVKSNRKDIRELLRWMMYWIVFAALTVFETLTDFLLSWFPFYSEFKLAFVIWLLSPATKGA 81 (225)
T ss_pred eehHHHHHHHHhHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhhccccccCcc
Confidence 46778889999999999999999 6678899999999999999999999999999999999999999999999999999
Q ss_pred hHHHhhhhhhhhhhchHHHHHHHHHHHHHHHH-HHHhhhHHHHHHHHHHHHHH
Q 029734 100 KYFYMSRLRPFLLRHQARLDQILESVNGEMSQ-FVSDHQVEFRFVRTLFMKTV 151 (189)
Q Consensus 100 ~~lY~~~l~P~l~k~e~~ID~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~k~~ 151 (189)
.++|++++||++.+||++||+++.+++.+..+ +++..++.++.+.+.+....
T Consensus 82 ~~vY~~f~~p~ls~~E~eid~~l~~~k~~~~~~a~~~~~r~l~~~~~~~~~a~ 134 (225)
T KOG1726|consen 82 SYVYRKFLRPFLSKHEEEIDRMLVEAKERVYDAAVSILKRALNYAQTYALEAA 134 (225)
T ss_pred HHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999988766 45555778888766554443
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| >KOG1725 consensus Protein involved in membrane traffic (YOP1/TB2/DP1/HVA22 family) [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
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| >PF03134 TB2_DP1_HVA22: TB2/DP1, HVA22 family; InterPro: IPR004345 This family includes members from a wide variety of eukaryotes | Back alignment and domain information |
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| >COG5052 YOP1 Protein involved in membrane traffic [Intracellular trafficking and secretion] | Back alignment and domain information |
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Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00