Citrus Sinensis ID: 029741

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------19
Protein Sequence
MFAAENGLRGDPRLQGISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQRRLDGKPLYILVEPRLSVNY
Secondary Structure (PSIPRED)
ccccccccccccHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHHHHHccccccEEEEcccccccccHHHHHHHcccEEEcccccccccccccEEEEEccccEEEEEEccccccccEEEEEEccccccHHHHHHHHHHHHcccEEEEEEEEEEccccccccccccEEEEEEccccccc
Secondary Structure Prediction (SSPRO)
cccHHccccccHHHHHHHHHcEEEcccccccccEEEcHHHHccHHHHHHHHHHHHHHcccccccEEEEEcccHHHHHHHHHHHHccEEEEEEEcccccccEEEEEEEccccEEEEEEEccccccccEEEEEEEEEcccHHHHHHHHHHHHcccEEEEEEEEEEccccHHHcccccEEEEEEEEEEEcc
Coil and Loop (DISEMBL)
mfaaenglrgdprlqGISKAIrvvpdfpipgimfQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEargfvfgpsialaigakfvplrkpnklpgevisEAYVLEYGTDrlemhvgaiepgerALVIDDLVATGGTLSAAVRLLERMGAEVVECACvvglpegqrrldgkplyilveprlsvny
Flexible Loop (DISEMBL)
mfaaenglrgdprlqGISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVglpegqrrldgkplyilveprlsvny
Low Complexity Region (SEG)
MFAAENGLRGDPRLQGISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQRRLDGKPLYILVEPRLSVNY
Disordered region (IsUnstruct)
***************GISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQRRLDGKPLYILVE*******
Disordered Region (DISOPRED)
****************ISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQRRLDGKPLYILVEPRLS*N*
Disordered Region (DISEMBL)
********RGDPRLQGISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQRRLDGKPLYILVEPRLSVNY
Disordered Region (DISPRO)
*********GDPRLQGISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQRRLDGKPLYILVEPRLSVNY
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MFAAENGLRGDPRLQGISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQRRLDGKPLYILVEPRLSVNY
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	188	2.2.26 [Sep-21-2011]
Q42563	192	Adenine phosphoribosyltra	no	no	0.973	0.953	0.756	1e-73
P31166	243	Adenine phosphoribosyltra	no	no	0.909	0.703	0.716	2e-70
Q43199	181	Adenine phosphoribosyltra	N/A	no	0.952	0.988	0.640	6e-65
A3QF54	181	Adenine phosphoribosyltra	yes	no	0.845	0.878	0.527	1e-45
A8FX87	184	Adenine phosphoribosyltra	yes	no	0.867	0.885	0.515	9e-45
B7LLQ1	183	Adenine phosphoribosyltra	yes	no	0.851	0.874	0.512	1e-44
Q3Z4T0	183	Adenine phosphoribosyltra	yes	no	0.851	0.874	0.512	1e-44
Q32J49	183	Adenine phosphoribosyltra	yes	no	0.851	0.874	0.512	1e-44
Q325C7	183	Adenine phosphoribosyltra	yes	no	0.851	0.874	0.512	1e-44
B2U4S2	183	Adenine phosphoribosyltra	yes	no	0.851	0.874	0.512	1e-44

>sp|Q42563|APT2_ARATH Adenine phosphoribosyltransferase 2 OS=Arabidopsis thaliana GN=APT2 PE=2 SV=1

 Score =  275 bits (703), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 140/185 (75%), Positives = 155/185 (83%), Gaps = 2/185 (1%)

Query: 1   MFAAENGLRGDPRLQGISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRD 60
           MFA ENGL+GDPRL+ IS AIRV+P FP  GIMFQDITTLLLD  AFK  VDIFVDRY+ 
Sbjct: 1   MFAVENGLQGDPRLKAISDAIRVIPHFPKTGIMFQDITTLLLDPVAFKHVVDIFVDRYKH 60

Query: 61  MGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVG 120
           M IS+VAG+EARGF+FGP IALAIGAKFVPLRKP KLPG VISE Y LEYG D LEM V 
Sbjct: 61  MNISLVAGVEARGFIFGPPIALAIGAKFVPLRKPGKLPGRVISEEYELEYGRDCLEMSVE 120

Query: 121 AIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLP--EGQRRLDGKPLYI 178
           A++  ERAL+IDDLVATGGTLSA++ LLER GAEVVECACVVGLP  +GQ +L GKPLY+
Sbjct: 121 AVKSEERALIIDDLVATGGTLSASINLLERAGAEVVECACVVGLPKFKGQCKLKGKPLYV 180

Query: 179 LVEPR 183
           LVEP 
Sbjct: 181 LVEPN 185

Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 2EC: .EC: 7

>sp|P31166|APT1_ARATH Adenine phosphoribosyltransferase 1, chloroplastic OS=Arabidopsis thaliana GN=APT1 PE=1 SV=2

 Score =  264 bits (675), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 124/173 (71%), Positives = 152/173 (87%), Gaps = 2/173 (1%)

Query: 11  DPRLQGISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIE 70
           DPR+  I+ +IRV+PDFP PGIMFQDITTLLLD +AFKDT+ +FVDRY+D GISVVAG+E
Sbjct: 68  DPRIAKIASSIRVIPDFPKPGIMFQDITTLLLDTEAFKDTIALFVDRYKDKGISVVAGVE 127

Query: 71  ARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALV 130
           ARGF+FGP IALAIGAKFVP+RKP KLPG+VISE Y LEYGTD +EMHVGA+EPGERA++
Sbjct: 128 ARGFIFGPPIALAIGAKFVPMRKPKKLPGKVISEEYSLEYGTDTIEMHVGAVEPGERAII 187

Query: 131 IDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLDGKPLYILVE 181
           IDDL+ATGGTL+AA+RLLER+G ++VECACV+ LPE  G+ +L    L++LV+
Sbjct: 188 IDDLIATGGTLAAAIRLLERVGVKIVECACVIELPELKGKEKLGETSLFVLVK 240

Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 4

EC: .

EC: 2

EC: .

EC: 7

>sp|Q43199|APT1_WHEAT Adenine phosphoribosyltransferase 1 OS=Triticum aestivum GN=APT1 PE=2 SV=1

 Score =  246 bits (628), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 116/181 (64%), Positives = 152/181 (83%), Gaps = 2/181 (1%)

Query: 8   LRGDPRLQGISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVA 67
           +  D R++ I+ +IR +P+FP PGI+FQDITTLLLD +AF+DT D+FV+RY+D  I+VVA
Sbjct: 1   MASDGRVERIASSIRAIPNFPKPGILFQDITTLLLDPQAFRDTTDLFVERYKDKDITVVA 60

Query: 68  GIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGER 127
           G+EARGF+FGP IALAIGAKFVP+RKP KLPGEVISE Y LEYGTD++EMHVGA++P +R
Sbjct: 61  GVEARGFIFGPPIALAIGAKFVPIRKPKKLPGEVISEEYSLEYGTDKIEMHVGAVQPNDR 120

Query: 128 ALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLDGKPLYILVEPRLS 185
            L++DDL+ATGGTL AA +L+ER+GA+VVECACV+ LPE  G+ +L   P+++LV+   S
Sbjct: 121 VLIVDDLIATGGTLCAAAKLIERVGAKVVECACVIELPELKGRDKLGDMPVFVLVQADES 180

Query: 186 V 186
           V
Sbjct: 181 V 181

Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.

Triticum aestivum (taxid: 4565)

EC: 2

EC: .

EC: 4

EC: .

EC: 2

EC: .

EC: 7

>sp|A3QF54|APT_SHELP Adenine phosphoribosyltransferase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=apt PE=3 SV=2

 Score =  182 bits (463), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 85/161 (52%), Positives = 122/161 (75%), Gaps = 2/161 (1%)

Query: 13  RLQGISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEAR 72
           +L  I ++I+ +PD+P PGIMF+D+T+L+ D  A++ T+ +FV+RY+D+G++ V G EAR
Sbjct: 5   KLALIKQSIKTIPDYPKPGIMFRDVTSLMEDPAAYQATIALFVERYKDLGVTKVVGTEAR 64

Query: 73  GFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVID 132
           GF+FG  +AL +G  FVP+RKP KLP E ISE+Y LEYG D LE+H  AI+PG++ LV+D
Sbjct: 65  GFLFGAPLALELGVGFVPVRKPGKLPRETISESYELEYGHDMLEIHTDAIKPGDKVLVVD 124

Query: 133 DLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRL 171
           DL+ATGGT+ A V+L+ ++G EV   A V+ LPE  G+ RL
Sbjct: 125 DLLATGGTIEATVKLIRQLGGEVEHAAFVISLPELGGEHRL 165

Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.

Shewanella loihica (strain ATCC BAA-1088 / PV-4) (taxid: 323850)

EC: 2

EC: .

EC: 4

EC: .

EC: 2

EC: .

EC: 7

>sp|A8FX87|APT_SHESH Adenine phosphoribosyltransferase OS=Shewanella sediminis (strain HAW-EB3) GN=apt PE=3 SV=1

 Score =  179 bits (454), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 85/165 (51%), Positives = 120/165 (72%), Gaps = 2/165 (1%)

Query: 17  ISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVF 76
           I ++I+ +PD+P PGI+F+D+T+LL DH A+K T+DI V++Y+D G + V G EARGF+F
Sbjct: 12  IKQSIKTIPDYPKPGILFRDVTSLLEDHTAYKATMDILVEKYKDQGFTKVVGTEARGFLF 71

Query: 77  GPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVA 136
           G  +AL +G  FVP+RKP KLP E ISE+Y LEYG D LE+HV AI   ++ LVIDDL+A
Sbjct: 72  GAPLALELGLGFVPVRKPGKLPRETISESYELEYGHDVLEIHVDAINENDKVLVIDDLLA 131

Query: 137 TGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLDGKPLYIL 179
           TGGT+ A V+L+  +G +V   A V+ LP+  G++RL    L ++
Sbjct: 132 TGGTIEATVKLIRNLGGKVNHAAFVISLPDLGGEKRLQAMDLELV 176

Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.

Shewanella sediminis (strain HAW-EB3) (taxid: 425104)

EC: 2

EC: .

EC: 4

EC: .

EC: 2

EC: .

EC: 7

>sp|B7LLQ1|APT_ESCF3 Adenine phosphoribosyltransferase OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=apt PE=3 SV=1

 Score =  179 bits (453), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 83/162 (51%), Positives = 124/162 (76%), Gaps = 2/162 (1%)

Query: 13  RLQGISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEAR 72
           +L+ +  +I+ + D+P PGI+F+D+T+LL D KA+  ++D+ V+RY++ GI+ V G EAR
Sbjct: 7   QLEYLKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIDLLVERYKNAGITKVVGTEAR 66

Query: 73  GFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVID 132
           GF+FG  +AL +G  FVP+RKP KLP E ISE Y LEYGTD+LE+HV AI+PG++ LV+D
Sbjct: 67  GFLFGAPVALGLGVGFVPVRKPGKLPRETISETYDLEYGTDQLEIHVDAIKPGDKVLVVD 126

Query: 133 DLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLD 172
           DL+ATGGT+ A V+L+ R+G EV + A ++ L +  G++RL+
Sbjct: 127 DLLATGGTIEATVKLIRRLGGEVTDAAFIINLFDLGGEQRLE 168

Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.

Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) (taxid: 585054)

EC: 2

EC: .

EC: 4

EC: .

EC: 2

EC: .

EC: 7

>sp|Q3Z4T0|APT_SHISS Adenine phosphoribosyltransferase OS=Shigella sonnei (strain Ss046) GN=apt PE=3 SV=1

 Score =  178 bits (452), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 83/162 (51%), Positives = 124/162 (76%), Gaps = 2/162 (1%)

Query: 13  RLQGISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEAR 72
           +L+ +  +I+ + D+P PGI+F+D+T+LL D KA+  ++D+ V+RY++ GI+ V G EAR
Sbjct: 7   QLEYLKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIDLLVERYKNAGITKVVGTEAR 66

Query: 73  GFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVID 132
           GF+FG  +AL +G  FVP+RKP KLP E ISE Y LEYGTD+LE+HV AI+PG++ LV+D
Sbjct: 67  GFLFGAPVALGLGVGFVPVRKPGKLPRETISETYDLEYGTDQLEIHVDAIKPGDKVLVVD 126

Query: 133 DLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLD 172
           DL+ATGGT+ A V+L+ R+G EV + A ++ L +  G++RL+
Sbjct: 127 DLLATGGTIEATVKLIRRLGGEVADAAFIINLFDLGGEQRLE 168

Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.

Shigella sonnei (strain Ss046) (taxid: 300269)

EC: 2

EC: .

EC: 4

EC: .

EC: 2

EC: .

EC: 7

>sp|Q32J49|APT_SHIDS Adenine phosphoribosyltransferase OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=apt PE=3 SV=1

 Score =  178 bits (452), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 83/162 (51%), Positives = 124/162 (76%), Gaps = 2/162 (1%)

Query: 13  RLQGISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEAR 72
           +L+ +  +I+ + D+P PGI+F+D+T+LL D KA+  ++D+ V+RY++ GI+ V G EAR
Sbjct: 7   QLEYLKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIDLLVERYKNAGITKVVGTEAR 66

Query: 73  GFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVID 132
           GF+FG  +AL +G  FVP+RKP KLP E ISE Y LEYGTD+LE+HV AI+PG++ LV+D
Sbjct: 67  GFLFGAPVALGLGVGFVPVRKPGKLPRETISETYDLEYGTDQLEIHVDAIKPGDKVLVVD 126

Query: 133 DLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLD 172
           DL+ATGGT+ A V+L+ R+G EV + A ++ L +  G++RL+
Sbjct: 127 DLLATGGTIEATVKLIRRLGGEVADAAFIINLFDLGGEQRLE 168

Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.

Shigella dysenteriae serotype 1 (strain Sd197) (taxid: 300267)

EC: 2

EC: .

EC: 4

EC: .

EC: 2

EC: .

EC: 7

>sp|Q325C7|APT_SHIBS Adenine phosphoribosyltransferase OS=Shigella boydii serotype 4 (strain Sb227) GN=apt PE=3 SV=1

 Score =  178 bits (452), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 83/162 (51%), Positives = 124/162 (76%), Gaps = 2/162 (1%)

Query: 13  RLQGISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEAR 72
           +L+ +  +I+ + D+P PGI+F+D+T+LL D KA+  ++D+ V+RY++ GI+ V G EAR
Sbjct: 7   QLEYLKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIDLLVERYKNAGITKVVGTEAR 66

Query: 73  GFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVID 132
           GF+FG  +AL +G  FVP+RKP KLP E ISE Y LEYGTD+LE+HV AI+PG++ LV+D
Sbjct: 67  GFLFGAPVALGLGVGFVPVRKPGKLPRETISETYDLEYGTDQLEIHVDAIKPGDKVLVVD 126

Query: 133 DLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLD 172
           DL+ATGGT+ A V+L+ R+G EV + A ++ L +  G++RL+
Sbjct: 127 DLLATGGTIEATVKLIRRLGGEVADAAFIINLFDLGGEQRLE 168

Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.

Shigella boydii serotype 4 (strain Sb227) (taxid: 300268)

EC: 2

EC: .

EC: 4

EC: .

EC: 2

EC: .

EC: 7

>sp|B2U4S2|APT_SHIB3 Adenine phosphoribosyltransferase OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=apt PE=3 SV=1

 Score =  178 bits (452), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 83/162 (51%), Positives = 124/162 (76%), Gaps = 2/162 (1%)

Query: 13  RLQGISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEAR 72
           +L+ +  +I+ + D+P PGI+F+D+T+LL D KA+  ++D+ V+RY++ GI+ V G EAR
Sbjct: 7   QLEYLKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIDLLVERYKNAGITKVVGTEAR 66

Query: 73  GFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVID 132
           GF+FG  +AL +G  FVP+RKP KLP E ISE Y LEYGTD+LE+HV AI+PG++ LV+D
Sbjct: 67  GFLFGAPVALGLGVGFVPVRKPGKLPRETISETYDLEYGTDQLEIHVDAIKPGDKVLVVD 126

Query: 133 DLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLD 172
           DL+ATGGT+ A V+L+ R+G EV + A ++ L +  G++RL+
Sbjct: 127 DLLATGGTIEATVKLIRRLGGEVADAAFIINLFDLGGEQRLE 168

Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.

Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) (taxid: 344609)

EC: 2

EC: .

EC: 4

EC: .

EC: 2

EC: .

EC: 7

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	188
225442922	192	PREDICTED: adenine phosphoribosyltransfe	0.973	0.953	0.875	1e-87
297743475	186	unnamed protein product [Vitis vinifera]	0.973	0.983	0.875	2e-87
224141909	191	predicted protein [Populus trichocarpa]	0.973	0.958	0.886	3e-87
255548878	213	Adenine phosphoribosyltransferase, putat	0.973	0.859	0.875	5e-87
449441900	191	PREDICTED: adenine phosphoribosyltransfe	0.973	0.958	0.881	8e-86
224089276	191	predicted protein [Populus trichocarpa]	0.973	0.958	0.843	5e-84
225430318	191	PREDICTED: adenine phosphoribosyltransfe	0.978	0.963	0.838	6e-83
255553231	186	Adenine phosphoribosyltransferase, putat	0.973	0.983	0.843	2e-82
351721348	198	uncharacterized protein LOC100499904 [Gl	0.973	0.924	0.832	5e-82
15238973	191	adenine phosphoribosyltransferase 5 [Ara	0.968	0.952	0.809	5e-81

>gi|225442922|ref|XP_002265016.1| PREDICTED: adenine phosphoribosyltransferase 2-like [Vitis vinifera]

 Score =  327 bits (839), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 162/185 (87%), Positives = 175/185 (94%), Gaps = 2/185 (1%)

Query: 1   MFAAENGLRGDPRLQGISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRD 60
           MFA ENGL+GDPRL+ IS+AIRVVP FP  GIMFQDITTLLLDHKAFKDTVDIFVDRYRD
Sbjct: 7   MFAGENGLQGDPRLKAISEAIRVVPHFPKQGIMFQDITTLLLDHKAFKDTVDIFVDRYRD 66

Query: 61  MGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVG 120
           MGISVVAG+EARGF+FGPSIALAIGAKFVPLRKP KLPGEVISEAYVLEYGTDRLEMHVG
Sbjct: 67  MGISVVAGVEARGFMFGPSIALAIGAKFVPLRKPKKLPGEVISEAYVLEYGTDRLEMHVG 126

Query: 121 AIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLDGKPLYI 178
           A++PGERALVIDDL+ATGGTL AA++LLER+GAEVVECACV+GLPE  GQ RL+GKPLYI
Sbjct: 127 AVQPGERALVIDDLIATGGTLCAAIKLLERVGAEVVECACVIGLPEAKGQCRLNGKPLYI 186

Query: 179 LVEPR 183
           LVEPR
Sbjct: 187 LVEPR 191

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297743475|emb|CBI36342.3| unnamed protein product [Vitis vinifera]

 Score =  327 bits (838), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 162/185 (87%), Positives = 175/185 (94%), Gaps = 2/185 (1%)

Query: 1   MFAAENGLRGDPRLQGISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRD 60
           MFA ENGL+GDPRL+ IS+AIRVVP FP  GIMFQDITTLLLDHKAFKDTVDIFVDRYRD
Sbjct: 1   MFAGENGLQGDPRLKAISEAIRVVPHFPKQGIMFQDITTLLLDHKAFKDTVDIFVDRYRD 60

Query: 61  MGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVG 120
           MGISVVAG+EARGF+FGPSIALAIGAKFVPLRKP KLPGEVISEAYVLEYGTDRLEMHVG
Sbjct: 61  MGISVVAGVEARGFMFGPSIALAIGAKFVPLRKPKKLPGEVISEAYVLEYGTDRLEMHVG 120

Query: 121 AIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLDGKPLYI 178
           A++PGERALVIDDL+ATGGTL AA++LLER+GAEVVECACV+GLPE  GQ RL+GKPLYI
Sbjct: 121 AVQPGERALVIDDLIATGGTLCAAIKLLERVGAEVVECACVIGLPEAKGQCRLNGKPLYI 180

Query: 179 LVEPR 183
           LVEPR
Sbjct: 181 LVEPR 185

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224141909|ref|XP_002324303.1| predicted protein [Populus trichocarpa] gi|222865737|gb|EEF02868.1| predicted protein [Populus trichocarpa]

 Score =  326 bits (835), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 164/185 (88%), Positives = 175/185 (94%), Gaps = 2/185 (1%)

Query: 1   MFAAENGLRGDPRLQGISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRD 60
           MFAAENGL+GDPRLQGIS+AIRVVP FP PGIMFQDITTLLLDHKAFKDTVDIFVDRYRD
Sbjct: 1   MFAAENGLKGDPRLQGISEAIRVVPHFPKPGIMFQDITTLLLDHKAFKDTVDIFVDRYRD 60

Query: 61  MGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVG 120
           MGISVVAG+EARGF+FGP+IALAIGAKFVPLRKP KLPGEVI+EAY LEYGTD LEMHVG
Sbjct: 61  MGISVVAGVEARGFMFGPAIALAIGAKFVPLRKPRKLPGEVIAEAYELEYGTDCLEMHVG 120

Query: 121 AIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLDGKPLYI 178
           A+EPGERA+VIDDLVATGGTLSAA+RLLERM AEVVECACV+GL E  GQ RL+GKPLYI
Sbjct: 121 AVEPGERAIVIDDLVATGGTLSAAIRLLERMEAEVVECACVIGLREVKGQCRLNGKPLYI 180

Query: 179 LVEPR 183
           LVEPR
Sbjct: 181 LVEPR 185

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255548878|ref|XP_002515495.1| Adenine phosphoribosyltransferase, putative [Ricinus communis] gi|223545439|gb|EEF46944.1| Adenine phosphoribosyltransferase, putative [Ricinus communis]

 Score =  325 bits (833), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 162/185 (87%), Positives = 175/185 (94%), Gaps = 2/185 (1%)

Query: 1   MFAAENGLRGDPRLQGISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRD 60
           MFAA+NGL+GDPRLQ IS+AIRVVP FP PGIMFQDITTLL DHKAFKD VDIFVDRYR+
Sbjct: 1   MFAAQNGLKGDPRLQAISEAIRVVPHFPKPGIMFQDITTLLPDHKAFKDAVDIFVDRYRN 60

Query: 61  MGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVG 120
           MGISVVAG+EARGF+FGPSIALAIGAKFVPLRKP KLPGEVISE YVLEYGTD LEMHVG
Sbjct: 61  MGISVVAGVEARGFMFGPSIALAIGAKFVPLRKPRKLPGEVISEKYVLEYGTDCLEMHVG 120

Query: 121 AIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLDGKPLYI 178
           A++PGERAL+IDDLVATGGTLSAA+RLLER+GAEVVECACV+GLPE  GQRRL+GKPLYI
Sbjct: 121 AVQPGERALIIDDLVATGGTLSAAIRLLERVGAEVVECACVIGLPEVKGQRRLNGKPLYI 180

Query: 179 LVEPR 183
           LVEPR
Sbjct: 181 LVEPR 185

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449441900|ref|XP_004138720.1| PREDICTED: adenine phosphoribosyltransferase 2-like [Cucumis sativus] gi|449527059|ref|XP_004170530.1| PREDICTED: adenine phosphoribosyltransferase 2-like [Cucumis sativus]

 Score =  321 bits (823), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 163/185 (88%), Positives = 172/185 (92%), Gaps = 2/185 (1%)

Query: 1   MFAAENGLRGDPRLQGISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRD 60
           MFAAENGL+GDPRLQGIS+AIRVVP FP PGIMFQDITTLLLDHKAFKDTVDIFVDRYR 
Sbjct: 1   MFAAENGLKGDPRLQGISQAIRVVPHFPKPGIMFQDITTLLLDHKAFKDTVDIFVDRYRG 60

Query: 61  MGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVG 120
           M ISVVAG+EARGF+FGPSIAL+IGAKFVPLRKP KLPGEVISEAY LEYGTD LEM + 
Sbjct: 61  MNISVVAGVEARGFMFGPSIALSIGAKFVPLRKPRKLPGEVISEAYDLEYGTDCLEMQID 120

Query: 121 AIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLDGKPLYI 178
           A++ GERALVIDDLVATGGTLSAA+RLLERMGAEVVECACVVGL E  GQRRLDGKPLYI
Sbjct: 121 AVKTGERALVIDDLVATGGTLSAAIRLLERMGAEVVECACVVGLREVKGQRRLDGKPLYI 180

Query: 179 LVEPR 183
           LVEPR
Sbjct: 181 LVEPR 185

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224089276|ref|XP_002308672.1| predicted protein [Populus trichocarpa] gi|222854648|gb|EEE92195.1| predicted protein [Populus trichocarpa]

 Score =  315 bits (807), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 156/185 (84%), Positives = 172/185 (92%), Gaps = 2/185 (1%)

Query: 1   MFAAENGLRGDPRLQGISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRD 60
           MFAAENGL+ DPRLQGIS+AIRVVP FP  GIMFQDITTLLLDHK FKDTVDIFVDRYRD
Sbjct: 1   MFAAENGLKSDPRLQGISEAIRVVPHFPKQGIMFQDITTLLLDHKVFKDTVDIFVDRYRD 60

Query: 61  MGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVG 120
           M ISVVAG+EARGF+FGP+IALAIGAKFVPLRKP KLPGEVISEAY LEYGTD LE+HVG
Sbjct: 61  MNISVVAGVEARGFMFGPAIALAIGAKFVPLRKPRKLPGEVISEAYELEYGTDCLEIHVG 120

Query: 121 AIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLDGKPLYI 178
           A++PGERA+VIDDLVATGGTLSAA+ LLER+GAEV+ECACV+G+P+  GQ RL+GKPLYI
Sbjct: 121 AVQPGERAIVIDDLVATGGTLSAAISLLERVGAEVIECACVIGVPDIKGQCRLNGKPLYI 180

Query: 179 LVEPR 183
           LVEPR
Sbjct: 181 LVEPR 185

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225430318|ref|XP_002285191.1| PREDICTED: adenine phosphoribosyltransferase 2 [Vitis vinifera] gi|296082053|emb|CBI21058.3| unnamed protein product [Vitis vinifera]

 Score =  311 bits (798), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 156/186 (83%), Positives = 170/186 (91%), Gaps = 2/186 (1%)

Query: 1   MFAAENGLRGDPRLQGISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRD 60
           MFA E+GLRGDPRLQ IS+A+R+VP FP PGIMFQDITTLLLDHKAFK TV+IFVDRYRD
Sbjct: 1   MFAEEDGLRGDPRLQAISEALRIVPHFPKPGIMFQDITTLLLDHKAFKGTVEIFVDRYRD 60

Query: 61  MGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVG 120
           M ISVVAG+EARGF+FGPS+ALAIGAKFVPLRKP KLPGEVISE Y LEYGTDRLEMHVG
Sbjct: 61  MDISVVAGVEARGFLFGPSVALAIGAKFVPLRKPKKLPGEVISEDYELEYGTDRLEMHVG 120

Query: 121 AIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLP--EGQRRLDGKPLYI 178
           A+ PGERALVIDD VATGGTLSAA+RLL+R+GAEVVECACVVGLP  EGQ RL+G PLYI
Sbjct: 121 AVHPGERALVIDDFVATGGTLSAAIRLLKRVGAEVVECACVVGLPEVEGQSRLNGTPLYI 180

Query: 179 LVEPRL 184
           LV P+L
Sbjct: 181 LVGPQL 186

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255553231|ref|XP_002517658.1| Adenine phosphoribosyltransferase, putative [Ricinus communis] gi|223543290|gb|EEF44822.1| Adenine phosphoribosyltransferase, putative [Ricinus communis]

 Score =  310 bits (794), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 156/185 (84%), Positives = 170/185 (91%), Gaps = 2/185 (1%)

Query: 1   MFAAENGLRGDPRLQGISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRD 60
           MFA ENGL+GDPRL+ IS AIRVVP FP  GIMFQDITTLLLD KAFK TVDIFVDRYRD
Sbjct: 1   MFAVENGLQGDPRLKAISDAIRVVPHFPKQGIMFQDITTLLLDPKAFKYTVDIFVDRYRD 60

Query: 61  MGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVG 120
           M ISVVAG+EARGF+FGPSIALAIGAKFVPLRKP KLPGEVISEAYVLEYGTD LEMH+G
Sbjct: 61  MDISVVAGVEARGFIFGPSIALAIGAKFVPLRKPKKLPGEVISEAYVLEYGTDCLEMHIG 120

Query: 121 AIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLDGKPLYI 178
           A++ GERA++IDDLVATGGTLSAA+RLLER+GAEV+ECACV+GLPE  GQ RL+GKPLYI
Sbjct: 121 AVKHGERAIIIDDLVATGGTLSAAIRLLERVGAEVIECACVIGLPEFKGQCRLNGKPLYI 180

Query: 179 LVEPR 183
           LVEPR
Sbjct: 181 LVEPR 185

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351721348|ref|NP_001237718.1| uncharacterized protein LOC100499904 [Glycine max] gi|255627539|gb|ACU14114.1| unknown [Glycine max]

 Score =  308 bits (790), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 154/185 (83%), Positives = 167/185 (90%), Gaps = 2/185 (1%)

Query: 1   MFAAENGLRGDPRLQGISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRD 60
           MFA ENGL+GDPRLQ IS+AIRVVP FP  GIMFQDITTLLLDHKAFKDTVDIFVDRYRD
Sbjct: 1   MFAEENGLKGDPRLQAISQAIRVVPHFPKHGIMFQDITTLLLDHKAFKDTVDIFVDRYRD 60

Query: 61  MGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVG 120
           M ISVVAGIEARGF+FGPSIAL IGAKFVPLRKP KLPGEVISE Y LEYGTD LE+HVG
Sbjct: 61  MHISVVAGIEARGFMFGPSIALGIGAKFVPLRKPRKLPGEVISEKYALEYGTDCLELHVG 120

Query: 121 AIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLDGKPLYI 178
           A +PGERA++IDDLVATGGTLSA V+LLER+GAEVVECACV+G+P+  GQ R  GKPLY+
Sbjct: 121 AAQPGERAIIIDDLVATGGTLSAGVKLLERVGAEVVECACVIGVPDVKGQCRSIGKPLYV 180

Query: 179 LVEPR 183
           LVEPR
Sbjct: 181 LVEPR 185

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15238973|ref|NP_196677.1| adenine phosphoribosyltransferase 5 [Arabidopsis thaliana] gi|297807153|ref|XP_002871460.1| hypothetical protein ARALYDRAFT_487948 [Arabidopsis lyrata subsp. lyrata] gi|8953378|emb|CAB96651.1| adenine phosphoribosyltransferase-like protein [Arabidopsis thaliana] gi|28393271|gb|AAO42064.1| putative adenine phosphoribosyltransferase [Arabidopsis thaliana] gi|28827532|gb|AAO50610.1| putative adenine phosphoribosyltransferase [Arabidopsis thaliana] gi|297317297|gb|EFH47719.1| hypothetical protein ARALYDRAFT_487948 [Arabidopsis lyrata subsp. lyrata] gi|332004257|gb|AED91640.1| adenine phosphoribosyltransferase 5 [Arabidopsis thaliana]

 Score =  305 bits (782), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 149/184 (80%), Positives = 166/184 (90%), Gaps = 2/184 (1%)

Query: 1   MFAAENGLRGDPRLQGISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRD 60
           MFAAENGL+GDPRL+ IS AIRVVP+FP  GIMFQDITTLLLDHKAFK T+DIFVDRY+D
Sbjct: 1   MFAAENGLKGDPRLEAISAAIRVVPNFPKKGIMFQDITTLLLDHKAFKHTIDIFVDRYKD 60

Query: 61  MGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVG 120
           M ISVVAG+EARGF+FGPSIALAIGAKF+PLRKP KLPG+VISE+Y LEYG DRLEMHVG
Sbjct: 61  MQISVVAGVEARGFLFGPSIALAIGAKFIPLRKPGKLPGKVISESYELEYGHDRLEMHVG 120

Query: 121 AIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLDGKPLYI 178
           A+EP ER ++IDDLVATGGTLSAA+ LLE  GAEVVECACV+GLPE  GQ +L GKPLY+
Sbjct: 121 AVEPRERVIIIDDLVATGGTLSAAMSLLESQGAEVVECACVIGLPEVKGQHKLKGKPLYV 180

Query: 179 LVEP 182
           LVEP
Sbjct: 181 LVEP 184

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	188
TAIR|locus:2147967	191	APT5 "adenine phosphoribosyltr	0.968	0.952	0.809	1.5e-76
TAIR|locus:2016309	192	APT2 "adenine phosphoribosyl t	0.968	0.947	0.760	1e-68
TAIR|locus:2135550	182	APT4 "adenine phosphoribosyl t	0.952	0.983	0.730	1.9e-67
TAIR|locus:2127480	183	APT3 "adenine phosphoribosyl t	0.920	0.945	0.76	5.1e-67
UNIPROTKB|P69503	183	apt "adenine phosphoribosyltra	0.893	0.918	0.505	3.5e-43
UNIPROTKB|Q9KT52	181	apt "Adenine phosphoribosyltra	0.861	0.895	0.493	9.3e-43
TIGR_CMR|VC_1053	181	VC_1053 "adenine phosphoribosy	0.861	0.895	0.493	9.3e-43
TIGR_CMR|SO_2012	181	SO_2012 "adenine phosphoribosy	0.824	0.856	0.477	5.5e-38
TIGR_CMR|CPS_3745	181	CPS_3745 "adenine phosphoribos	0.835	0.867	0.471	2.4e-37
UNIPROTKB|E2QYQ0	180	APRT "Uncharacterized protein"	0.909	0.95	0.431	9.2e-36

TAIR|locus:2147967 APT5 "adenine phosphoribosyltransferase 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 771 (276.5 bits), Expect = 1.5e-76, P = 1.5e-76
 Identities = 149/184 (80%), Positives = 166/184 (90%)

Query:     1 MFAAENGLRGDPRLQGISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRD 60
             MFAAENGL+GDPRL+ IS AIRVVP+FP  GIMFQDITTLLLDHKAFK T+DIFVDRY+D
Sbjct:     1 MFAAENGLKGDPRLEAISAAIRVVPNFPKKGIMFQDITTLLLDHKAFKHTIDIFVDRYKD 60

Query:    61 MGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVG 120
             M ISVVAG+EARGF+FGPSIALAIGAKF+PLRKP KLPG+VISE+Y LEYG DRLEMHVG
Sbjct:    61 MQISVVAGVEARGFLFGPSIALAIGAKFIPLRKPGKLPGKVISESYELEYGHDRLEMHVG 120

Query:   121 AIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLDGKPLYI 178
             A+EP ER ++IDDLVATGGTLSAA+ LLE  GAEVVECACV+GLPE  GQ +L GKPLY+
Sbjct:   121 AVEPRERVIIIDDLVATGGTLSAAMSLLESQGAEVVECACVIGLPEVKGQHKLKGKPLYV 180

Query:   179 LVEP 182
             LVEP
Sbjct:   181 LVEP 184

GO:0003999 "adenine phosphoribosyltransferase activity" evidence=IEA;ISS

GO:0005737 "cytoplasm" evidence=ISM;IEA

GO:0006168 "adenine salvage" evidence=IEA

GO:0009116 "nucleoside metabolic process" evidence=IEA

TAIR|locus:2016309 APT2 "adenine phosphoribosyl transferase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 697 (250.4 bits), Expect = 1.0e-68, P = 1.0e-68
 Identities = 140/184 (76%), Positives = 155/184 (84%)

Query:     1 MFAAENGLRGDPRLQGISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRD 60
             MFA ENGL+GDPRL+ IS AIRV+P FP  GIMFQDITTLLLD  AFK  VDIFVDRY+ 
Sbjct:     1 MFAVENGLQGDPRLKAISDAIRVIPHFPKTGIMFQDITTLLLDPVAFKHVVDIFVDRYKH 60

Query:    61 MGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVG 120
             M IS+VAG+EARGF+FGP IALAIGAKFVPLRKP KLPG VISE Y LEYG D LEM V 
Sbjct:    61 MNISLVAGVEARGFIFGPPIALAIGAKFVPLRKPGKLPGRVISEEYELEYGRDCLEMSVE 120

Query:   121 AIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLDGKPLYI 178
             A++  ERAL+IDDLVATGGTLSA++ LLER GAEVVECACVVGLP+  GQ +L GKPLY+
Sbjct:   121 AVKSEERALIIDDLVATGGTLSASINLLERAGAEVVECACVVGLPKFKGQCKLKGKPLYV 180

Query:   179 LVEP 182
             LVEP
Sbjct:   181 LVEP 184

GO:0003999 "adenine phosphoribosyltransferase activity" evidence=IEA;ISS;IDA

GO:0005737 "cytoplasm" evidence=ISM;IEA

GO:0006168 "adenine salvage" evidence=IEA;TAS

GO:0009116 "nucleoside metabolic process" evidence=IEA

GO:0005829 "cytosol" evidence=ISS

GO:0005886 "plasma membrane" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0015114 "phosphate ion transmembrane transporter activity" evidence=ISS

TAIR|locus:2135550 APT4 "adenine phosphoribosyl transferase 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 685 (246.2 bits), Expect = 1.9e-67, P = 1.9e-67
 Identities = 133/182 (73%), Positives = 157/182 (86%)

Query:     4 AENGLRGDPRLQGISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGI 63
             +EN ++ DPR+ GI   IRVVPDFP  GIMFQDITTLLLD KAFKDT+D+FV+RYRDM I
Sbjct:     2 SENEVK-DPRIDGIKTKIRVVPDFPKKGIMFQDITTLLLDPKAFKDTIDLFVERYRDMNI 60

Query:    64 SVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIE 123
             SVVAGIEARGF+FG  IALAIGAKFVPLRKP KLPG++I E Y LEYG+DRLEMHV A++
Sbjct:    61 SVVAGIEARGFIFGSPIALAIGAKFVPLRKPKKLPGQIIFEEYELEYGSDRLEMHVEAVD 120

Query:   124 PGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLDGKPLYILVE 181
              G+RALV+DDL+ATGGTL AA+ LL+R+GAEV+ECACV+ LPE  G+ RL+GKPLY+LVE
Sbjct:   121 SGDRALVVDDLIATGGTLCAAMNLLKRVGAEVIECACVIELPELKGRERLEGKPLYVLVE 180

Query:   182 PR 183
              R
Sbjct:   181 YR 182

GO:0003999 "adenine phosphoribosyltransferase activity" evidence=IEA;ISS

GO:0005737 "cytoplasm" evidence=ISM;IEA

GO:0006168 "adenine salvage" evidence=IEA;ISS

GO:0009116 "nucleoside metabolic process" evidence=IEA

TAIR|locus:2127480 APT3 "adenine phosphoribosyl transferase 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 681 (244.8 bits), Expect = 5.1e-67, P = 5.1e-67
 Identities = 133/175 (76%), Positives = 150/175 (85%)

Query:    11 DPRLQGISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIE 70
             DPR+ GI   IRVVPDFP  GIMFQDITT+LLD KAFKDT+D+FV+RYRD  ISVVAGIE
Sbjct:     9 DPRIHGIKTKIRVVPDFPKKGIMFQDITTVLLDPKAFKDTIDLFVERYRDKNISVVAGIE 68

Query:    71 ARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALV 130
             ARGF+FGP IALAIGAKFVPLRKP KLPGE I E Y LEYG DRLEMH+GA+E G+RALV
Sbjct:    69 ARGFLFGPPIALAIGAKFVPLRKPKKLPGETIFEEYELEYGNDRLEMHIGAVEAGDRALV 128

Query:   131 IDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLDGKPLYILVEPR 183
             +DDL+ATGGTL AA+ LLER+GAEVVECACV+ LPE  G++RL GKPL +LVE R
Sbjct:   129 VDDLIATGGTLCAAINLLERVGAEVVECACVIELPELKGRQRLKGKPLCMLVEYR 183

GO:0003999 "adenine phosphoribosyltransferase activity" evidence=IEA;ISS;IDA

GO:0005737 "cytoplasm" evidence=ISM;IEA

GO:0006168 "adenine salvage" evidence=IEA;TAS

GO:0009116 "nucleoside metabolic process" evidence=IEA

GO:0005829 "cytosol" evidence=IDA

UNIPROTKB|P69503 apt "adenine phosphoribosyltransferase" [Escherichia coli K-12 (taxid:83333)]

 Score = 456 (165.6 bits), Expect = 3.5e-43, P = 3.5e-43
 Identities = 87/172 (50%), Positives = 128/172 (74%)

Query:    13 RLQGISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEAR 72
             +L+ +  +I+ + D+P PGI+F+D+T+LL D KA+  ++D+ V+RY++ GI+ V G EAR
Sbjct:     7 QLEYLKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIDLLVERYKNAGITKVVGTEAR 66

Query:    73 GFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVID 132
             GF+FG  +AL +G  FVP+RKP KLP E ISE Y LEYGTD+LE+HV AI+PG++ LV+D
Sbjct:    67 GFLFGAPVALGLGVGFVPVRKPGKLPRETISETYDLEYGTDQLEIHVDAIKPGDKVLVVD 126

Query:   133 DLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLD--GKPLYILV 180
             DL+ATGGT+ A V+L+ R+G EV + A ++ L +  G++RL+  G   Y LV
Sbjct:   127 DLLATGGTIEATVKLIRRLGGEVADAAFIINLFDLGGEQRLEKQGITSYSLV 178

GO:0009116 "nucleoside metabolic process" evidence=IEA

GO:0044209 "AMP salvage" evidence=IEA

GO:0042802 "identical protein binding" evidence=IDA

GO:0000287 "magnesium ion binding" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0006168 "adenine salvage" evidence=IEA;IDA

GO:0006166 "purine ribonucleoside salvage" evidence=IEA

GO:0003999 "adenine phosphoribosyltransferase activity" evidence=IEA;IDA

UNIPROTKB|Q9KT52 apt "Adenine phosphoribosyltransferase" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)]

 Score = 452 (164.2 bits), Expect = 9.3e-43, P = 9.3e-43
 Identities = 81/164 (49%), Positives = 122/164 (74%)

Query:    17 ISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVF 76
             I  +I+ +PD+P  GI+F+D+T+LL D +A++ T+ + V++Y+DMG + V G EARGF+F
Sbjct:     9 IKSSIKSIPDYPKKGILFRDVTSLLEDAQAYQATIQLLVEKYKDMGFTKVVGTEARGFLF 68

Query:    77 GPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVA 136
             G  +AL +G  FVP+RKP KLP + ++++Y LEYGTD LE+HV AI+PG++ LV+DDL+A
Sbjct:    69 GAPLALELGVGFVPVRKPGKLPRQTVAQSYELEYGTDTLEIHVDAIKPGDKVLVVDDLLA 128

Query:   137 TGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLDGKPLYI 178
             TGGT+ A  +L+ ++G EV   A V+ LPE  G +RL+G  L +
Sbjct:   129 TGGTIEATTKLIRQLGGEVEHAAFVINLPEIGGDKRLEGLGLQV 172

GO:0003999 "adenine phosphoribosyltransferase activity" evidence=ISS

GO:0006166 "purine ribonucleoside salvage" evidence=ISS

TIGR_CMR|VC_1053 VC_1053 "adenine phosphoribosyltransferase" [Vibrio cholerae O1 biovar El Tor (taxid:686)]

 Score = 452 (164.2 bits), Expect = 9.3e-43, P = 9.3e-43
 Identities = 81/164 (49%), Positives = 122/164 (74%)

Query:    17 ISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVF 76
             I  +I+ +PD+P  GI+F+D+T+LL D +A++ T+ + V++Y+DMG + V G EARGF+F
Sbjct:     9 IKSSIKSIPDYPKKGILFRDVTSLLEDAQAYQATIQLLVEKYKDMGFTKVVGTEARGFLF 68

Query:    77 GPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVA 136
             G  +AL +G  FVP+RKP KLP + ++++Y LEYGTD LE+HV AI+PG++ LV+DDL+A
Sbjct:    69 GAPLALELGVGFVPVRKPGKLPRQTVAQSYELEYGTDTLEIHVDAIKPGDKVLVVDDLLA 128

Query:   137 TGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLDGKPLYI 178
             TGGT+ A  +L+ ++G EV   A V+ LPE  G +RL+G  L +
Sbjct:   129 TGGTIEATTKLIRQLGGEVEHAAFVINLPEIGGDKRLEGLGLQV 172

GO:0003999 "adenine phosphoribosyltransferase activity" evidence=ISS

GO:0006166 "purine ribonucleoside salvage" evidence=ISS

TIGR_CMR|SO_2012 SO_2012 "adenine phosphoribosyltransferase" [Shewanella oneidensis MR-1 (taxid:211586)]

 Score = 407 (148.3 bits), Expect = 5.5e-38, P = 5.5e-38
 Identities = 75/157 (47%), Positives = 112/157 (71%)

Query:    17 ISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVF 76
             I ++I+ +P++P  GI+F+D+T+LL +  A+K T+D+ V+ YR  G + + G EARGF+F
Sbjct:     9 IKQSIKTIPNYPKEGILFRDVTSLLENATAYKATIDLLVEHYRSKGFTKIVGTEARGFLF 68

Query:    77 GPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVA 136
             G  +AL +G  FVP+RKP KLP   IS++Y LEYG D LE+H  AI   ++ LV+DDL+A
Sbjct:    69 GAPLALGLGIGFVPVRKPGKLPRATISQSYELEYGHDSLEIHTDAITANDKVLVVDDLLA 128

Query:   137 TGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRL 171
             TGGT+ A V+L+ ++G EV + A V+ LP+  G+ RL
Sbjct:   129 TGGTIEATVKLIRQLGGEVQDAAFVISLPDLGGEARL 165

GO:0003999 "adenine phosphoribosyltransferase activity" evidence=ISS

GO:0006166 "purine ribonucleoside salvage" evidence=ISS

TIGR_CMR|CPS_3745 CPS_3745 "adenine phosphoribosyltransferase" [Colwellia psychrerythraea 34H (taxid:167879)]

 Score = 401 (146.2 bits), Expect = 2.4e-37, P = 2.4e-37
 Identities = 75/159 (47%), Positives = 110/159 (69%)

Query:    15 QGISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGF 74
             Q +  AI  +PD+P+ GIMF+D+T+LL D +AFK  +++  ++Y+  G + + G EARGF
Sbjct:     7 QLLINAIHTIPDYPVEGIMFRDVTSLLEDAEAFKLVMELLENKYKGRGFTKIVGTEARGF 66

Query:    75 VFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDL 134
             +FG  +ALA+   F+P+RKP KLP    S+AY LEYG D LE+H  A+ P +  L+IDDL
Sbjct:    67 LFGAPLALALNIGFIPVRKPGKLPRPTYSQAYQLEYGEDILEIHQDALTPEDNVLIIDDL 126

Query:   135 VATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRL 171
             +ATGGT+ A  +L+ R+GA+V E   V+ LP+  G+ RL
Sbjct:   127 LATGGTIEATTKLIRRLGAQVQEAGFVISLPDLGGEERL 165

GO:0003999 "adenine phosphoribosyltransferase activity" evidence=ISS

GO:0006166 "purine ribonucleoside salvage" evidence=ISS

UNIPROTKB|E2QYQ0 APRT "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 386 (140.9 bits), Expect = 9.2e-36, P = 9.2e-36
 Identities = 76/176 (43%), Positives = 118/176 (67%)

Query:    11 DPRLQGISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRDM-G--ISVVA 67
             DP LQ +++ IR  PDFP+PG++F+DI+ LL D  +F+ ++ +     R   G  I  + 
Sbjct:     3 DPELQLVARRIRSFPDFPVPGVLFRDISPLLKDPDSFRASIQLLASHLRKTHGGKIDYIV 62

Query:    68 GIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGER 127
             G+++RGF+FGPS+A  +G   V +RK  KLPG  +S +Y LEYG  +LE+   A+EPGE+
Sbjct:    63 GLDSRGFLFGPSLAQELGLGCVLIRKQGKLPGPTVSASYTLEYGKAQLEIQRDALEPGEK 122

Query:   128 ALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLP--EGQRRLDGKPLYILVE 181
              +V+DDL+ATGGT+ AA  LL ++ A+V+EC  +V L   +G+ +LD  P + L++
Sbjct:   123 VVVVDDLLATGGTMRAACELLGQLQAKVLECVSLVELTSLKGREKLDPVPFFSLLQ 178

GO:0007625 "grooming behavior" evidence=IEA

GO:0006168 "adenine salvage" evidence=IEA

GO:0006166 "purine ribonucleoside salvage" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0003999 "adenine phosphoribosyltransferase activity" evidence=IEA

GO:0002055 "adenine binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
A7MJV7	APT_CROS8	2, ., 4, ., 2, ., 7	0.5	0.8936	0.9180	yes	no
A5F2N2	APT_VIBC3	2, ., 4, ., 2, ., 7	0.4939	0.8617	0.8950	yes	no
A7FL92	APT_YERP3	2, ., 4, ., 2, ., 7	0.4850	0.8776	0.8823	yes	no
B7MQI4	APT_ECO81	2, ., 4, ., 2, ., 7	0.5123	0.8510	0.8743	yes	no
A4TPB0	APT_YERPP	2, ., 4, ., 2, ., 7	0.4850	0.8776	0.8823	yes	no
Q66DQ2	APT_YERPS	2, ., 4, ., 2, ., 7	0.4850	0.8776	0.8823	yes	no
Q325C7	APT_SHIBS	2, ., 4, ., 2, ., 7	0.5123	0.8510	0.8743	yes	no
Q8XD48	APT_ECO57	2, ., 4, ., 2, ., 7	0.5123	0.8510	0.8743	N/A	no
Q1CL33	APT_YERPN	2, ., 4, ., 2, ., 7	0.4850	0.8776	0.8823	yes	no
A3QF54	APT_SHELP	2, ., 4, ., 2, ., 7	0.5279	0.8457	0.8784	yes	no
A4W7F3	APT_ENT38	2, ., 4, ., 2, ., 7	0.4939	0.8617	0.8852	yes	no
Q0TKH2	APT_ECOL5	2, ., 4, ., 2, ., 7	0.5123	0.8510	0.8743	yes	no
B6I0C1	APT_ECOSE	2, ., 4, ., 2, ., 7	0.5123	0.8510	0.8743	yes	no
Q9KT52	APT_VIBCH	2, ., 4, ., 2, ., 7	0.4939	0.8617	0.8950	yes	no
A8FX87	APT_SHESH	2, ., 4, ., 2, ., 7	0.5151	0.8670	0.8858	yes	no
A1A8D5	APT_ECOK1	2, ., 4, ., 2, ., 7	0.5123	0.8510	0.8743	yes	no
B2U4S2	APT_SHIB3	2, ., 4, ., 2, ., 7	0.5123	0.8510	0.8743	yes	no
P69503	APT_ECOLI	2, ., 4, ., 2, ., 7	0.5123	0.8510	0.8743	N/A	no
B1JHN6	APT_YERPY	2, ., 4, ., 2, ., 7	0.4850	0.8776	0.8823	yes	no
P69504	APT_ECOL6	2, ., 4, ., 2, ., 7	0.5123	0.8510	0.8743	yes	no
B1IZC5	APT_ECOLC	2, ., 4, ., 2, ., 7	0.5123	0.8510	0.8743	yes	no
Q83M42	APT_SHIFL	2, ., 4, ., 2, ., 7	0.5123	0.8510	0.8743	yes	no
A4SMN3	APT_AERS4	2, ., 4, ., 2, ., 7	0.5187	0.8404	0.8729	yes	no
B7NIG1	APT_ECO7I	2, ., 4, ., 2, ., 7	0.5123	0.8510	0.8743	yes	no
Q8ZC94	APT_YERPE	2, ., 4, ., 2, ., 7	0.4850	0.8776	0.8823	yes	no
C3LTV0	APT_VIBCM	2, ., 4, ., 2, ., 7	0.4939	0.8617	0.8950	yes	no
B7LLQ1	APT_ESCF3	2, ., 4, ., 2, ., 7	0.5123	0.8510	0.8743	yes	no
B7UKE9	APT_ECO27	2, ., 4, ., 2, ., 7	0.5123	0.8510	0.8743	yes	no
Q42563	APT2_ARATH	2, ., 4, ., 2, ., 7	0.7567	0.9734	0.9531	no	no
Q3Z4T0	APT_SHISS	2, ., 4, ., 2, ., 7	0.5123	0.8510	0.8743	yes	no
C4ZUS3	APT_ECOBW	2, ., 4, ., 2, ., 7	0.5123	0.8510	0.8743	yes	no
B7N922	APT_ECOLU	2, ., 4, ., 2, ., 7	0.5123	0.8510	0.8743	yes	no
B5Z3X9	APT_ECO5E	2, ., 4, ., 2, ., 7	0.5123	0.8510	0.8743	yes	no
Q32J49	APT_SHIDS	2, ., 4, ., 2, ., 7	0.5123	0.8510	0.8743	yes	no
A7ZXC7	APT_ECOHS	2, ., 4, ., 2, ., 7	0.5123	0.8510	0.8743	yes	no
B7L794	APT_ECO55	2, ., 4, ., 2, ., 7	0.5123	0.8510	0.8743	yes	no
B1LJM6	APT_ECOSM	2, ., 4, ., 2, ., 7	0.5123	0.8510	0.8743	yes	no
B1KNJ9	APT_SHEWM	2, ., 4, ., 2, ., 7	0.5189	0.8297	0.8618	yes	no
Q43199	APT1_WHEAT	2, ., 4, ., 2, ., 7	0.6408	0.9521	0.9889	N/A	no
B7M3W1	APT_ECO8A	2, ., 4, ., 2, ., 7	0.5123	0.8510	0.8743	yes	no
A1S560	APT_SHEAM	2, ., 4, ., 2, ., 7	0.5121	0.8617	0.8950	yes	no
B1XFQ6	APT_ECODH	2, ., 4, ., 2, ., 7	0.5123	0.8510	0.8743	yes	no
B7MDZ1	APT_ECO45	2, ., 4, ., 2, ., 7	0.5123	0.8510	0.8743	yes	no
Q1RF67	APT_ECOUT	2, ., 4, ., 2, ., 7	0.5123	0.8510	0.8743	yes	no
A9R0Q1	APT_YERPG	2, ., 4, ., 2, ., 7	0.4850	0.8776	0.8823	yes	no
A7ZIM8	APT_ECO24	2, ., 4, ., 2, ., 7	0.5123	0.8510	0.8743	yes	no
B2K6Z1	APT_YERPB	2, ., 4, ., 2, ., 7	0.4850	0.8776	0.8823	yes	no
Q0T7B5	APT_SHIF8	2, ., 4, ., 2, ., 7	0.5123	0.8510	0.8743	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.4.2	0.983
4th Layer	2.4.2.7	0.979

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	grail3.0007027201	adenine phosphoribosyltransferase (EC-2.4.2.7) (192 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	gw1.III.614.1	GMP synthetase (EC-6.3.5.2) (434 aa)				•		•	•		0.963
	gw1.VIII.102.1	hypothetical protein (223 aa)						•	•		0.920
	gw1.X.4176.1	hypothetical protein (223 aa)						•	•		0.919
	estExt_fgenesh4_pm.C_LG_X0439	aminoimidazolecarboximide ribonucleotide transformylase/inosine monophosphate cyclohydrolase (E [...] (545 aa)	•					•	•		0.917
	gw1.X.1884.1	adenylosuccinate lyase (EC-4.3.2.2) (472 aa)						•	•		0.911
	fgenesh4_pm.C_LG_XVI000442	AMP deaminase (EC-3.5.4.6) (797 aa)						•			0.904
	estExt_fgenesh4_pg.C_LG_XII0928	adenylate kinase (EC-2.7.4.3) (246 aa)						•	•		0.903
	estExt_fgenesh4_pm.C_LG_XV0275	SubName- Full=Putative uncharacterized protein; (248 aa)						•	•		0.903
	gw1.XVIII.3392.1	nucleotide kinase (EC-2.7.4.3) (500 aa)						•	•		0.902
	grail3.0022041801	SubName- Full=Putative uncharacterized protein; (342 aa)					•	•			0.901

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	188
PLN02293	187	PLN02293, PLN02293, adenine phosphoribosyltransfer	1e-123
PRK02304	175	PRK02304, PRK02304, adenine phosphoribosyltransfer	2e-80
TIGR01090	169	TIGR01090, apt, adenine phosphoribosyltransferase	4e-68
COG0503	179	COG0503, Apt, Adenine/guanine phosphoribosyltransf	2e-56
PRK12560	187	PRK12560, PRK12560, adenine phosphoribosyltransfer	3e-29
cd06223	130	cd06223, PRTases_typeI, Phosphoribosyl transferase	1e-24
pfam00156	123	pfam00156, Pribosyltran, Phosphoribosyl transferas	2e-21
PRK00455	202	PRK00455, pyrE, orotate phosphoribosyltransferase;	1e-08
COG0461	201	COG0461, PyrE, Orotate phosphoribosyltransferase [	5e-08
TIGR01743	268	TIGR01743, purR_Bsub, pur operon repressor, Bacill	8e-07
TIGR01367	187	TIGR01367, pyrE_Therm, orotate phosphoribosyltrans	9e-07
PRK09213	271	PRK09213, PRK09213, pur operon repressor; Provisio	1e-06
PRK09219	189	PRK09219, PRK09219, xanthine phosphoribosyltransfe	2e-06
PRK06031	233	PRK06031, PRK06031, phosphoribosyltransferase; Pro	3e-06
TIGR01251	308	TIGR01251, ribP_PPkin, ribose-phosphate pyrophosph	4e-06
PRK00129	209	PRK00129, upp, uracil phosphoribosyltransferase; R	6e-06
COG0462	314	COG0462, PrsA, Phosphoribosylpyrophosphate synthet	7e-06
PRK13810	187	PRK13810, PRK13810, orotate phosphoribosyltransfer	7e-06
PRK08558	238	PRK08558, PRK08558, adenine phosphoribosyltransfer	1e-05
PRK07322	178	PRK07322, PRK07322, adenine phosphoribosyltransfer	2e-05
PRK00934	285	PRK00934, PRK00934, ribose-phosphate pyrophosphoki	2e-05
TIGR00336	173	TIGR00336, pyrE, orotate phosphoribosyltransferase	8e-05
COG1040	225	COG1040, ComFC, Predicted amidophosphoribosyltrans	2e-04
COG0035	210	COG0035, Upp, Uracil phosphoribosyltransferase [Nu	3e-04
TIGR01744	191	TIGR01744, XPRTase, xanthine phosphoribosyltransfe	5e-04
PRK02277	200	PRK02277, PRK02277, orotate phosphoribosyltransfer	5e-04
TIGR01091	207	TIGR01091, upp, uracil phosphoribosyltransferase	7e-04
PRK06827	382	PRK06827, PRK06827, phosphoribosylpyrophosphate sy	7e-04
PRK02812	330	PRK02812, PRK02812, ribose-phosphate pyrophosphoki	0.001
PRK13812	176	PRK13812, PRK13812, orotate phosphoribosyltransfer	0.001
PRK07199	301	PRK07199, PRK07199, phosphoribosylpyrophosphate sy	0.002
TIGR00201	190	TIGR00201, comF, comF family protein	0.003
PRK03092	304	PRK03092, PRK03092, ribose-phosphate pyrophosphoki	0.003

>gnl|CDD|177930 PLN02293, PLN02293, adenine phosphoribosyltransferase

 Score =  343 bits (883), Expect = e-123
 Identities = 154/185 (83%), Positives = 168/185 (90%), Gaps = 2/185 (1%)

Query: 1   MFAAENGLRGDPRLQGISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRD 60
           MFA ENG +GDPRLQGIS AIRVVPDFP PGIMFQDITTLLLD KAFKDT+D+FV+RYRD
Sbjct: 1   MFAMENGDQGDPRLQGISSAIRVVPDFPKPGIMFQDITTLLLDPKAFKDTIDLFVERYRD 60

Query: 61  MGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVG 120
           MGISVVAGIEARGF+FGP IALAIGAKFVPLRKP KLPGEVISE YVLEYGTD LEMHVG
Sbjct: 61  MGISVVAGIEARGFIFGPPIALAIGAKFVPLRKPGKLPGEVISEEYVLEYGTDCLEMHVG 120

Query: 121 AIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLDGKPLYI 178
           A+EPGERALVIDDL+ATGGTL AA+ LLER GAEVVECACV+ LPE  G+ +L+GKPL++
Sbjct: 121 AVEPGERALVIDDLIATGGTLCAAINLLERAGAEVVECACVIELPELKGREKLNGKPLFV 180

Query: 179 LVEPR 183
           LVE R
Sbjct: 181 LVESR 185

Length = 187

>gnl|CDD|235028 PRK02304, PRK02304, adenine phosphoribosyltransferase; Provisional

 Score =  236 bits (604), Expect = 2e-80
 Identities = 94/167 (56%), Positives = 128/167 (76%), Gaps = 2/167 (1%)

Query: 17  ISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVF 76
           +  +IR +PDFP PGI+F+DIT LL D +AF++ +D  V+RY+D  I  + GIEARGF+F
Sbjct: 6   LKSSIRTIPDFPKPGILFRDITPLLADPEAFREVIDALVERYKDADIDKIVGIEARGFIF 65

Query: 77  GPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVA 136
           G ++A  +G  FVP+RKP KLP E ISE+Y LEYGTD LE+H  AI+PG+R L++DDL+A
Sbjct: 66  GAALAYKLGIGFVPVRKPGKLPRETISESYELEYGTDTLEIHKDAIKPGDRVLIVDDLLA 125

Query: 137 TGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLDGKPLYILVE 181
           TGGTL AA++LLER+GAEVV  A V+ LP+  G+ +L+G P+  LV+
Sbjct: 126 TGGTLEAAIKLLERLGAEVVGAAFVIELPDLGGREKLEGYPVKSLVK 172

Length = 175

>gnl|CDD|233267 TIGR01090, apt, adenine phosphoribosyltransferase

 Score =  204 bits (522), Expect = 4e-68
 Identities = 81/165 (49%), Positives = 118/165 (71%), Gaps = 3/165 (1%)

Query: 20  AIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPS 79
           +IR +PDFP  GI+F+DIT LL + + F+  +D+ V+RY+D  I  + G EARGF+FG +
Sbjct: 4   SIRSIPDFPKKGILFRDITPLLNNPELFRFLIDLLVERYKDANIDYIVGPEARGFIFGAA 63

Query: 80  IALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGG 139
           +A  +G  FVP+RKP KLPGE IS +Y LEYG D+LE+H  AI+PG+R L++DDL+ATGG
Sbjct: 64  LAYKLGVGFVPVRKPGKLPGETISASYDLEYGKDQLEIHKDAIKPGQRVLIVDDLLATGG 123

Query: 140 TLSAAVRLLERMGAEVVECACVVGLPE--GQRRLDGK-PLYILVE 181
           T  A   L+ ++G EVVE A ++ L +  G+ +L+   P++ L+E
Sbjct: 124 TAEATDELIRKLGGEVVEAAFLIELKDLNGRAKLEPNVPVFSLLE 168

A phylogenetic analysis suggested omitting the bi-directional best hit homologs from the spirochetes from the seed for This model and making only tentative predictions of adenine phosphoribosyltransferase function for this lineage. The trusted cutoff score is made high for this reason. Most proteins scoring between the trusted and noise cutoffs are likely to act as adenine phosphotransferase [Purines, pyrimidines, nucleosides, and nucleotides, Salvage of nucleosides and nucleotides]. Length = 169

>gnl|CDD|223577 COG0503, Apt, Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins [Nucleotide transport and metabolism]

 Score =  175 bits (445), Expect = 2e-56
 Identities = 75/169 (44%), Positives = 105/169 (62%)

Query: 14  LQGISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARG 73
           ++ +  +IR +PDFP  GI+F DIT LL D +     +D   +RY+D GI  +  IEARG
Sbjct: 5   MELLKDSIREIPDFPKGGILFVDITLLLGDPELLAKLIDELAERYKDDGIDKIVTIEARG 64

Query: 74  FVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDD 133
                ++AL +G  FVP+RK  KLP E + E Y LEYG++ LE+H  A++PG+R L++DD
Sbjct: 65  IPLAAAVALELGVPFVPVRKKGKLPEESVVETYYLEYGSETLELHKDALKPGDRVLIVDD 124

Query: 134 LVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQRRLDGKPLYILVEP 182
           L+ATGGT  A + LLE+ GAEVV  A V+ L E   R   +   + V  
Sbjct: 125 LLATGGTALALIELLEQAGAEVVGAAFVIELGELDGRKKLEDDGLPVFS 173

Length = 179

>gnl|CDD|183595 PRK12560, PRK12560, adenine phosphoribosyltransferase; Provisional

 Score =  106 bits (266), Expect = 3e-29
 Identities = 42/166 (25%), Positives = 71/166 (42%), Gaps = 18/166 (10%)

Query: 14  LQGISKAIRVVPDFPIPGIM--FQDITTLL----LDHKAFKDTVDIFVDRYRDMGISVVA 67
           L+ + K  RVV        +  F D    L    L   A +      + +Y D  I  + 
Sbjct: 3   LKNLYKNARVVNSGKALTTVNEFTDQLPALRPKVLKETAKE------IIKYIDKDIDKIV 56

Query: 68  GIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAY-VLEYGTDRLE--MHVGAIEP 124
             E +G      ++L +     PL      P  +    Y V+E G++  E  +++  IE 
Sbjct: 57  TEEDKGAPLATPVSL-LS--GKPLAMARWYPYSLSELNYNVVEIGSEYFEGVVYLNGIEK 113

Query: 125 GERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQRR 170
           G+R  +IDD ++TGGT+ A ++ +E  G  V +  CV+   +   R
Sbjct: 114 GDRVAIIDDTLSTGGTVIALIKAIENSGGIVSDVICVIEKTQNNGR 159

Length = 187

>gnl|CDD|206754 cd06223, PRTases_typeI, Phosphoribosyl transferase (PRT)-type I domain

 Score = 92.8 bits (231), Expect = 1e-24
 Identities = 45/132 (34%), Positives = 65/132 (49%), Gaps = 9/132 (6%)

Query: 51  VDIFVDRYRDMG--ISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVL 108
             +  +  R+      VV GI   G     ++A A+G     +RK  K PG   SE Y L
Sbjct: 2   GRLLAEEIREDLLEPDVVVGILRGGLPLAAALARALGLPLAFIRKERKGPGRTPSEPYGL 61

Query: 109 EYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQ 168
           E       + +G    G+R L++DD++ATGGTL AA+ LL+  GA+VV  A ++  PEG 
Sbjct: 62  E-------LPLGGDVKGKRVLLVDDVIATGGTLLAAIELLKEAGAKVVGVAVLLDKPEGG 114

Query: 169 RRLDGKPLYILV 180
            R    P   + 
Sbjct: 115 ARELASPGDPVY 126

Phosphoribosyl transferase (PRT) domain. The type I PRTases are identified by a conserved PRPP binding motif which features two adjacent acidic residues surrounded by one or more hydrophobic residue. PRTases catalyze the displacement of the alpha-1'-pyrophosphate of 5-phosphoribosyl-alpha1-pyrpphosphate (PRPP) by a nitrogen-containing nucleophile. The reaction products are an alpha-1 substituted ribose-5'-phosphate and a free pyrophosphate (PP). PRPP, an activated form of ribose-5-phosphate, is a key metabolite connecting nucleotide synthesis and salvage pathways. The type I PRTase family includes a range of diverse phosphoribosyl transferase enzymes and regulatory proteins of the nucleotide synthesis and salvage pathways, including adenine phosphoribosyltransferase EC:2.4.2.7., hypoxanthine-guanine-xanthine phosphoribosyltransferase, hypoxanthine phosphoribosyltransferase EC:2.4.2.8., ribose-phosphate pyrophosphokinase EC:2.7.6.1., amidophosphoribosyltransferase EC:2.4.2.14., orotate phosphoribosyltransferase EC:2.4.2.10., uracil phosphoribosyltransferase EC:2.4.2.9., and xanthine-guanine phosphoribosyltransferase EC:2.4.2.22. Length = 130

>gnl|CDD|215757 pfam00156, Pribosyltran, Phosphoribosyl transferase domain

 Score = 84.3 bits (209), Expect = 2e-21
 Identities = 40/127 (31%), Positives = 67/127 (52%), Gaps = 6/127 (4%)

Query: 38  TTLLLDHKAFKDTVDIFVDRYRDMGIS--VVAGIEARGFVFGPSIALAIGAKFVPLRKPN 95
           + LLLD +  ++ ++   ++ R+ GI   V+ GI   G     ++A  +G   V +RK  
Sbjct: 1   SNLLLDPEELRELIEALAEKIREEGIDPDVIVGIARGGIPLATALARELGIPLVLVRKSR 60

Query: 96  KLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEV 155
             P  + S        +  L   +  +  G+R L++DD++ TGGTL AAV LL++ GA+V
Sbjct: 61  SYPSSIKSR----GGESVTLLSRLPELLKGKRVLIVDDVLDTGGTLRAAVELLKKAGAKV 116

Query: 156 VECACVV 162
           V  A +V
Sbjct: 117 VGVAVLV 123

This family includes a range of diverse phosphoribosyl transferase enzymes. This family includes: Adenine phosphoribosyltransferase EC:2.4.2.7. Hypoxanthine-guanine-xanthine phosphoribosyltransferase. Hypoxanthine phosphoribosyltransferase EC:2.4.2.8. Ribose-phosphate pyrophosphokinase i EC:2.7.6.1. Amidophosphoribosyltransferase EC:2.4.2.14. Orotate phosphoribosyltransferase EC:2.4.2.10. Uracil phosphoribosyltransferase EC:2.4.2.9. Xanthine-guanine phosphoribosyltransferase EC:2.4.2.22. In Arabidopsis, At the very N-terminus of this domain is the P-Loop NTPase domain. Length = 123

>gnl|CDD|234771 PRK00455, pyrE, orotate phosphoribosyltransferase; Validated

 Score = 52.1 bits (126), Expect = 1e-08
 Identities = 36/129 (27%), Positives = 56/129 (43%), Gaps = 16/129 (12%)

Query: 36  DITTLLLDHKAFKDTVDIFVDRYRDMGIS--VVAGIEARGFVFGPSIALAIGAKFVPLRK 93
           D   LL   +A         +  +D GI   VVAG    G     ++A A+    + +RK
Sbjct: 36  DCRKLLSYPEALALLGRFLAEAIKDSGIEFDVVAGPATGGIPLAAAVARALDLPAIFVRK 95

Query: 94  PNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGA 153
             K            ++G     +  G    G+R LV++D++ TGG++  AV  +   GA
Sbjct: 96  EAK------------DHGEGGQ-I-EGRRLFGKRVLVVEDVITTGGSVLEAVEAIRAAGA 141

Query: 154 EVVECACVV 162
           EVV  A +V
Sbjct: 142 EVVGVAVIV 150

Length = 202

>gnl|CDD|223537 COG0461, PyrE, Orotate phosphoribosyltransferase [Nucleotide transport and metabolism]

 Score = 50.3 bits (121), Expect = 5e-08
 Identities = 34/132 (25%), Positives = 54/132 (40%), Gaps = 17/132 (12%)

Query: 34  FQDITTLLLDHKAFKDTVDIFVDRYRDMG-ISVVAGIEARGFVFGPSIA--LAIGAKFVP 90
           + D+   L   +  +       +  ++     VVAG    G     + A  LA       
Sbjct: 32  YVDLRLFLTGPELLQLIAFALAEIIKEALEFDVVAGPALGGIPLAAATALALAHLPPMAY 91

Query: 91  LRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLER 150
           +RK  K            ++GT  L    G    GE+ +V++D++ TGG++  AV  L  
Sbjct: 92  VRKEAK------------DHGTGGLI--EGGEVKGEKVVVVEDVITTGGSILEAVEALRE 137

Query: 151 MGAEVVECACVV 162
            GAEVV  A +V
Sbjct: 138 AGAEVVGVAVIV 149

Length = 201

>gnl|CDD|130804 TIGR01743, purR_Bsub, pur operon repressor, Bacillus subtilis type

 Score = 47.5 bits (113), Expect = 8e-07
 Identities = 37/163 (22%), Positives = 71/163 (43%), Gaps = 8/163 (4%)

Query: 25  PDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAI 84
           P+  +PG  +  +T +L           I    + +  I  V  +  +G     ++A  +
Sbjct: 92  PERILPG-GYLYLTDILGKPSILSKIGKILASVFAEREIDAVMTVATKGIPLAYAVASVL 150

Query: 85  GAKFVPLRKPNKLP-GEVISEAYVLEYGTDRLE-MHVG--AIEPGERALVIDDLVATGGT 140
               V +RK +K+  G  +S  YV    ++R++ M +   +++ G + L+IDD +  GGT
Sbjct: 151 NVPLVIVRKDSKVTEGSTVSINYV-SGSSNRIQTMSLAKRSLKTGSKVLIIDDFMKAGGT 209

Query: 141 LSAAVRLLERMGAEVVECACVVGLPEGQRRL--DGKPLYILVE 181
           ++  + LL+   AEV     ++       +L  D   L  L  
Sbjct: 210 INGMINLLDEFDAEVAGIGVLIDNEGVDEKLVDDYMSLLTLSN 252

This model represents the puring operon repressor PurR of low-GC Gram-positive bacteria. This homodimeric repressor contains a large region homologous to phosphoribosyltransferases and is inhibited by 5-phosphoribosyl 1-pyrophosphate [Purines, pyrimidines, nucleosides, and nucleotides, Purine ribonucleotide biosynthesis, Regulatory functions, DNA interactions]. Length = 268

>gnl|CDD|233377 TIGR01367, pyrE_Therm, orotate phosphoribosyltransferase, Thermus family

 Score = 46.7 bits (111), Expect = 9e-07
 Identities = 24/61 (39%), Positives = 39/61 (63%)

Query: 121 AIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQRRLDGKPLYILV 180
           A++PGE+ + ++D+V TGG+L  A+R +E  G +VV  AC++   +G +   G PL  L 
Sbjct: 101 AVKPGEKFVAVEDVVTTGGSLLEAIRAIEGQGGQVVGLACIIDRSQGGKPDSGVPLMSLK 160

Query: 181 E 181
           E
Sbjct: 161 E 161

This model represents a distinct clade of orotate phosphoribosyltransferases. Members include the experimentally determined example from Thermus aquaticus and additional examples from Caulobacter crescentus, Helicobacter pylori, Mesorhizobium loti, and related species [Purines, pyrimidines, nucleosides, and nucleotides, Pyrimidine ribonucleotide biosynthesis]. Length = 187

>gnl|CDD|236414 PRK09213, PRK09213, pur operon repressor; Provisional

 Score = 47.1 bits (113), Expect = 1e-06
 Identities = 33/109 (30%), Positives = 57/109 (52%), Gaps = 7/109 (6%)

Query: 53  IFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLP-GEVISEAYVLEYG 111
           I    + D  I  V  +E +G     ++A  +   FV +R+ +K+  G  +S  YV   G
Sbjct: 121 IIASAFADKKIDAVMTVETKGIPLAYAVANYLNVPFVIVRRDSKVTEGSTVSINYV--SG 178

Query: 112 -TDRLE-MHVG--AIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVV 156
            + R+E M +   +++ G R L++DD +  GGT++  + LL+   AEVV
Sbjct: 179 SSKRIETMSLSKRSLKEGSRVLIVDDFMKAGGTINGMISLLKEFDAEVV 227

Length = 271

>gnl|CDD|181705 PRK09219, PRK09219, xanthine phosphoribosyltransferase; Validated

 Score = 45.9 bits (110), Expect = 2e-06
 Identities = 35/117 (29%), Positives = 58/117 (49%), Gaps = 12/117 (10%)

Query: 54  FVDRYRDMGISVVAGIEARGFVFGPSI--ALAIGAKFVPLRK--PNKLPGEVISEAYVLE 109
           F  R++D GI+ +  IEA G    P++  ALA+G   V  +K     L  +V + A V  
Sbjct: 42  FARRFKDEGITKILTIEASGI--APAVMAALALGVPVVFAKKKKSLTLTDDVYT-ATVYS 98

Query: 110 YGTDRLEMHVGA----IEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVV 162
           + T ++   V      +  G+R L+IDD +A G      + ++E+ GA+V     V+
Sbjct: 99  F-TKQVTSTVSVSKKFLSEGDRVLIIDDFLANGQAALGLIDIIEQAGAKVAGIGIVI 154

Length = 189

>gnl|CDD|235678 PRK06031, PRK06031, phosphoribosyltransferase; Provisional

 Score = 45.9 bits (109), Expect = 3e-06
 Identities = 36/172 (20%), Positives = 70/172 (40%), Gaps = 44/172 (25%)

Query: 21  IRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVD----RYRDMGISVVAGIEARGFVF 76
           IR +PD        + + +L+++  +F + +D   +    + R     VVAG+   G   
Sbjct: 46  IRGLPDGD------RALASLIVNQASF-EVLDALAEHLAEKARAFDPDVVAGLPTLGLTL 98

Query: 77  GPSIALAIG-AKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAI-----------EP 124
             ++A  +G  ++VPL    K             +  D L + + +I           +P
Sbjct: 99  AAAVARKLGHTRYVPLGTSRKF------------WYRDELSVPLSSITTPDQGKRLYIDP 146

Query: 125 -------GERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQR 169
                  G R  +IDD++++G ++ A +RLL   G E         + + +R
Sbjct: 147 RMLPLLEGRRVALIDDVISSGASIVAGLRLLAACGIEPA--GIGAAMLQSER 196

Length = 233

>gnl|CDD|130318 TIGR01251, ribP_PPkin, ribose-phosphate pyrophosphokinase

 Score = 45.7 bits (109), Expect = 4e-06
 Identities = 14/40 (35%), Positives = 26/40 (65%)

Query: 125 GERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGL 164
           G+  +++DD++ TGGT++ A  +L+  GA+ V  A   G+
Sbjct: 210 GKDVVIVDDIIDTGGTIAKAAEILKSAGAKRVIAAATHGV 249

Alternate name: phosphoribosylpyrophosphate synthetase In some systems, close homologs lacking enzymatic activity exist and perform regulatory functions. The model is designated subfamily rather than equivalog for this reason [Purines, pyrimidines, nucleosides, and nucleotides, Purine ribonucleotide biosynthesis]. Length = 308

>gnl|CDD|234653 PRK00129, upp, uracil phosphoribosyltransferase; Reviewed

 Score = 44.7 bits (107), Expect = 6e-06
 Identities = 18/45 (40%), Positives = 31/45 (68%)

Query: 127 RALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQRRL 171
             +V+D ++ATGG+  AA+ LL++ GA+ ++  C+V  PEG + L
Sbjct: 126 TVIVVDPMLATGGSAIAAIDLLKKRGAKNIKVLCLVAAPEGIKAL 170

Length = 209

>gnl|CDD|223538 COG0462, PrsA, Phosphoribosylpyrophosphate synthetase [Nucleotide transport and metabolism / Amino acid transport and metabolism]

 Score = 44.9 bits (107), Expect = 7e-06
 Identities = 14/40 (35%), Positives = 26/40 (65%)

Query: 125 GERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGL 164
           G+  +++DD++ TGGT++ A + L+  GA+ V  A   G+
Sbjct: 214 GKDVVIVDDIIDTGGTIAKAAKALKERGAKKVYAAATHGV 253

Length = 314

>gnl|CDD|184341 PRK13810, PRK13810, orotate phosphoribosyltransferase; Provisional

 Score = 44.1 bits (104), Expect = 7e-06
 Identities = 30/112 (26%), Positives = 55/112 (49%), Gaps = 16/112 (14%)

Query: 57  RYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGT-DRL 115
           R ++M +  VAG+E  G     +++L  G   + +RK  K            +YGT  R 
Sbjct: 68  RIKEMDVDTVAGVELGGVPLATAVSLETGLPLLIVRKSVK------------DYGTGSRF 115

Query: 116 EMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEG 167
              VG ++P +R ++++D+  +GG++  A+ ++   GA +     VV   EG
Sbjct: 116 ---VGDLKPEDRIVMLEDVTTSGGSVREAIEVVREAGAYIKYVITVVDREEG 164

Length = 187

>gnl|CDD|181466 PRK08558, PRK08558, adenine phosphoribosyltransferase; Provisional

 Score = 43.8 bits (104), Expect = 1e-05
 Identities = 30/103 (29%), Positives = 50/103 (48%), Gaps = 2/103 (1%)

Query: 56  DRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYV-LEYGTDR 114
           +R+  + + VV      G     +IA   GA  V  +K  +   E   E Y  L  G + 
Sbjct: 105 ERFMGLRVDVVLTAATDGIPLAVAIASYFGADLVYAKKSKETGVEKFYEEYQRLASGIEV 164

Query: 115 -LEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVV 156
            L +   A++ G+R L++DD++ +G T  A + L  + GA+VV
Sbjct: 165 TLYLPASALKKGDRVLIVDDIIRSGETQRALLDLARQAGADVV 207

Length = 238

>gnl|CDD|180928 PRK07322, PRK07322, adenine phosphoribosyltransferase; Provisional

 Score = 43.0 bits (102), Expect = 2e-05
 Identities = 21/44 (47%), Positives = 29/44 (65%), Gaps = 2/44 (4%)

Query: 125 GERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQ 168
           G+R  ++DD+V+TGGTL+A  RL+ER G +VV  A      EG 
Sbjct: 120 GKRVAIVDDVVSTGGTLTALERLVERAGGQVV--AKAAIFAEGD 161

Length = 178

>gnl|CDD|234868 PRK00934, PRK00934, ribose-phosphate pyrophosphokinase; Provisional

 Score = 43.4 bits (103), Expect = 2e-05
 Identities = 16/40 (40%), Positives = 30/40 (75%)

Query: 125 GERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGL 164
           G+  L++DD+++TGGT++ A+++L+  GA+ V  ACV  +
Sbjct: 204 GKDVLIVDDIISTGGTMATAIKILKEQGAKKVYVACVHPV 243

Length = 285

>gnl|CDD|129436 TIGR00336, pyrE, orotate phosphoribosyltransferase

 Score = 40.9 bits (96), Expect = 8e-05
 Identities = 19/98 (19%), Positives = 41/98 (41%), Gaps = 9/98 (9%)

Query: 65  VVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEP 124
           V+AG    G     ++++        L KP        +     ++G        G +  
Sbjct: 57  VIAGPALGGIPIATAVSVK-------LAKPGGDIPLCFNRKEAKDHGEGGNI--EGELLE 107

Query: 125 GERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVV 162
           G++ +V++D++ TG ++  AV +++  G +V      V
Sbjct: 108 GDKVVVVEDVITTGTSILEAVEIIQAAGGQVAGVIIAV 145

Orotate phosphoribosyltransferase (OPRTase) is involved in the biosynthesis of pyrimidine nucleotides. Alpha-D-ribosyldiphosphate 5-phosphate (PRPP) and orotate are utilized to form pyrophosphate and orotidine 5'-monophosphate (OMP) in the presence of divalent cations, preferably Mg2+. In a number of eukaryotes, this protein is fused to a domain that catalyses the reaction (EC 4.1.1.23). The combined activity of EC 2.4.2.10 and EC 4.1.1.23 is termed uridine 5'-monophosphate synthase. The conserved Lys (K) residue at position 101 of the seed alignment has been proposed as the active site for the enzyme [Purines, pyrimidines, nucleosides, and nucleotides, Pyrimidine ribonucleotide biosynthesis]. Length = 173

>gnl|CDD|223970 COG1040, ComFC, Predicted amidophosphoribosyltransferases [General function prediction only]

 Score = 40.5 bits (95), Expect = 2e-04
 Identities = 15/42 (35%), Positives = 22/42 (52%)

Query: 120 GAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACV 161
             IE  +  L++DD+  TG TL  A +LL   GA+ V    +
Sbjct: 179 KGIEEPKNVLLVDDVYTTGATLKEAAKLLREAGAKRVFVLTL 220

Length = 225

>gnl|CDD|223113 COG0035, Upp, Uracil phosphoribosyltransferase [Nucleotide transport and metabolism]

 Score = 39.5 bits (93), Expect = 3e-04
 Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 1/51 (1%)

Query: 122 IEPGERALVIDDLVATGGTLSAAVRLL-ERMGAEVVECACVVGLPEGQRRL 171
                  +V+D ++ATGG+  AA+ LL +R G + ++   +V  PEG + +
Sbjct: 121 DIDERTVIVLDPMLATGGSAIAAIDLLKKRGGPKNIKVVSLVAAPEGIKAV 171

Length = 210

>gnl|CDD|130805 TIGR01744, XPRTase, xanthine phosphoribosyltransferase

 Score = 39.0 bits (91), Expect = 5e-04
 Identities = 34/131 (25%), Positives = 60/131 (45%), Gaps = 16/131 (12%)

Query: 42  LDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAI--GAKF-VPL-----RK 93
           +D K  ++  + F  R+ D GI+ +  IEA G      IA AI  G K  VP+     +K
Sbjct: 30  IDPKLMQEVGEEFARRFADDGITKIVTIEASG------IAPAIMTGLKLGVPVVFARKKK 83

Query: 94  PNKLPGEVISEAYV--LEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERM 151
           P  L   +++ +     +  T  + +    +   +R L+IDD +A G      V + ++ 
Sbjct: 84  PLTLTDNLLTASVHSFTKQTTSTVAVSGEFLSDQDRVLIIDDFLANGQAAHGLVDIAKQA 143

Query: 152 GAEVVECACVV 162
           GA++     V+
Sbjct: 144 GAKIAGIGIVI 154

This model represent a xanthine-specific phosphoribosyltransferase of Bacillus subtilis and closely related proteins from other species, mostly from other Gram-positive bacteria. The adjacent gene is a xanthine transporter; B. subtilis can import xanthine for the purine salvage pathway or for catabolism to obtain nitrogen [Purines, pyrimidines, nucleosides, and nucleotides, Salvage of nucleosides and nucleotides]. Length = 191

>gnl|CDD|235023 PRK02277, PRK02277, orotate phosphoribosyltransferase-like protein; Provisional

 Score = 39.1 bits (92), Expect = 5e-04
 Identities = 16/59 (27%), Positives = 33/59 (55%), Gaps = 7/59 (11%)

Query: 125 GERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVV---GLPEGQRRLDGKPLYILV 180
           G+R +++DD++ +G T+   +  L+  G + V    ++   G+ E    +DG P+Y L+
Sbjct: 140 GKRCVIVDDVITSGTTMKETIEYLKEHGGKPVAVVVLIDKSGIDE----IDGVPVYSLI 194

Length = 200

>gnl|CDD|130163 TIGR01091, upp, uracil phosphoribosyltransferase

 Score = 38.8 bits (91), Expect = 7e-04
 Identities = 17/48 (35%), Positives = 30/48 (62%)

Query: 124 PGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQRRL 171
                +V+D ++ATGGT+ AA+ LL++ GA+ ++   +V  PEG   +
Sbjct: 121 DERTVIVLDPMLATGGTMIAALDLLKKRGAKKIKVLSIVAAPEGIEAV 168

A fairly deep split in phylogenetic and UPGMA trees separates this mostly prokaryotic set of uracil phosphoribosyltransferases from a mostly eukaryotic set that includes uracil phosphoribosyltransferase, uridine kinases, and other, uncharacterized proteins [Purines, pyrimidines, nucleosides, and nucleotides, Salvage of nucleosides and nucleotides]. Length = 207

>gnl|CDD|180714 PRK06827, PRK06827, phosphoribosylpyrophosphate synthetase; Provisional

 Score = 38.8 bits (91), Expect = 7e-04
 Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 1/49 (2%)

Query: 125 GERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGL-PEGQRRLD 172
           G+  L++DD++A+GG++  A + L+  GA+ +  A   G    G  + D
Sbjct: 264 GKDVLIVDDMIASGGSMIDAAKELKSRGAKKIIVAATFGFFTNGLEKFD 312

Length = 382

>gnl|CDD|235072 PRK02812, PRK02812, ribose-phosphate pyrophosphokinase; Provisional

 Score = 38.6 bits (90), Expect = 0.001
 Identities = 16/36 (44%), Positives = 25/36 (69%), Gaps = 1/36 (2%)

Query: 125 GERALVIDDLVATGGTLSAAVRLLERMGA-EVVECA 159
           G+ A+++DD++ TGGT+    RLL + GA +V  CA
Sbjct: 230 GKTAILVDDMIDTGGTICEGARLLRKEGAKQVYACA 265

Length = 330

>gnl|CDD|237519 PRK13812, PRK13812, orotate phosphoribosyltransferase; Provisional

 Score = 37.8 bits (88), Expect = 0.001
 Identities = 26/72 (36%), Positives = 36/72 (50%), Gaps = 4/72 (5%)

Query: 101 VISEAYVLEYGT-DRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECA 159
           VI+     EYGT +R+E   G ++ GE  +V++D+  TG +   AV  L   GA V    
Sbjct: 85  VIARKQAKEYGTGNRIE---GRLDEGEEVVVLEDIATTGQSAVDAVEALREAGATVNRVL 141

Query: 160 CVVGLPEGQRRL 171
            VV   EG R  
Sbjct: 142 VVVDREEGAREN 153

Length = 176

>gnl|CDD|235960 PRK07199, PRK07199, phosphoribosylpyrophosphate synthetase; Provisional

 Score = 37.6 bits (88), Expect = 0.002
 Identities = 15/38 (39%), Positives = 21/38 (55%)

Query: 124 PGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACV 161
            G   +++DD+V+TG TL  A R L   GA   +C  V
Sbjct: 210 AGRTPVLVDDIVSTGRTLIEAARQLRAAGAASPDCVVV 247

Length = 301

>gnl|CDD|232871 TIGR00201, comF, comF family protein

 Score = 36.7 bits (85), Expect = 0.003
 Identities = 14/39 (35%), Positives = 21/39 (53%)

Query: 124 PGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVV 162
            G   +++DD+V TG TL    RLL  +GA  V+   + 
Sbjct: 151 QGRNIVLVDDVVTTGATLHEIARLLLELGAASVQVWTLA 189

This protein is found in species that do (Bacillus subtilis, Haemophilus influenzae) or do not (E. coli, Borrelia burgdorferi) have described systems for natural transformation with exogenous DNA. It is involved in competence for transformation in Bacillus subtilis [Cellular processes, DNA transformation]. Length = 190

>gnl|CDD|179535 PRK03092, PRK03092, ribose-phosphate pyrophosphokinase; Provisional

 Score = 36.8 bits (86), Expect = 0.003
 Identities = 19/46 (41%), Positives = 30/46 (65%), Gaps = 1/46 (2%)

Query: 119 VGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGL 164
           VG +E G   +++DD++ TGGT++ AVR L+  GA+ V  A   G+
Sbjct: 196 VGDVE-GRTCVLVDDMIDTGGTIAGAVRALKEAGAKDVIIAATHGV 240

Length = 304

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	188
PLN02293	187	adenine phosphoribosyltransferase	100.0
KOG1712	183	consensus Adenine phosphoribosyl transferases [Nuc	100.0
PRK02304	175	adenine phosphoribosyltransferase; Provisional	100.0
TIGR01090	169	apt adenine phosphoribosyltransferase. A phylogene	99.97
COG0503	179	Apt Adenine/guanine phosphoribosyltransferases and	99.96
PRK09219	189	xanthine phosphoribosyltransferase; Validated	99.96
PRK12560	187	adenine phosphoribosyltransferase; Provisional	99.96
TIGR01744	191	XPRTase xanthine phosphoribosyltransferase. This m	99.96
PRK13810	187	orotate phosphoribosyltransferase; Provisional	99.95
TIGR01743	268	purR_Bsub pur operon repressor, Bacillus subtilis	99.95
PRK09213	271	pur operon repressor; Provisional	99.95
PRK08558	238	adenine phosphoribosyltransferase; Provisional	99.94
PRK13809	206	orotate phosphoribosyltransferase; Provisional	99.94
PRK13812	176	orotate phosphoribosyltransferase; Provisional	99.93
PRK13811	170	orotate phosphoribosyltransferase; Provisional	99.93
PRK07322	178	adenine phosphoribosyltransferase; Provisional	99.92
TIGR00336	173	pyrE orotate phosphoribosyltransferase. The conser	99.92
PRK00455	202	pyrE orotate phosphoribosyltransferase; Validated	99.92
PRK02277	200	orotate phosphoribosyltransferase-like protein; Pr	99.92
TIGR01367	187	pyrE_Therm orotate phosphoribosyltransferase, Ther	99.91
PRK05500	477	bifunctional orotidine 5'-phosphate decarboxylase/	99.91
COG0461	201	PyrE Orotate phosphoribosyltransferase [Nucleotide	99.91
PRK06031	233	phosphoribosyltransferase; Provisional	99.88
PF00156	125	Pribosyltran: Phosphoribosyl transferase domain; I	99.83
COG0856	203	Orotate phosphoribosyltransferase homologs [Nucleo	99.83
PRK09162	181	hypoxanthine-guanine phosphoribosyltransferase; Pr	99.77
TIGR01203	166	HGPRTase hypoxanthine phosphoribosyltransferase. S	99.73
PLN02238	189	hypoxanthine phosphoribosyltransferase	99.71
PRK15423	178	hypoxanthine phosphoribosyltransferase; Provisiona	99.68
PRK09177	156	xanthine-guanine phosphoribosyltransferase; Valida	99.68
PRK07199	301	phosphoribosylpyrophosphate synthetase; Provisiona	99.68
PRK00934	285	ribose-phosphate pyrophosphokinase; Provisional	99.65
COG0462	314	PrsA Phosphoribosylpyrophosphate synthetase [Nucle	99.65
PRK02269	320	ribose-phosphate pyrophosphokinase; Provisional	99.64
PRK08525	445	amidophosphoribosyltransferase; Provisional	99.63
PRK05205	176	bifunctional pyrimidine regulatory protein PyrR ur	99.62
PTZ00271	211	hypoxanthine-guanine phosphoribosyltransferase; Pr	99.62
PRK04923	319	ribose-phosphate pyrophosphokinase; Provisional	99.61
COG1040	225	ComFC Predicted amidophosphoribosyltransferases [G	99.61
COG0634	178	Hpt Hypoxanthine-guanine phosphoribosyltransferase	99.61
TIGR00201	190	comF comF family protein. This protein is found in	99.59
PRK03092	304	ribose-phosphate pyrophosphokinase; Provisional	99.59
PRK01259	309	ribose-phosphate pyrophosphokinase; Provisional	99.59
PRK00553	332	ribose-phosphate pyrophosphokinase; Provisional	99.58
PRK02458	323	ribose-phosphate pyrophosphokinase; Provisional	99.58
PTZ00149	241	hypoxanthine phosphoribosyltransferase; Provisiona	99.57
PRK06827	382	phosphoribosylpyrophosphate synthetase; Provisiona	99.57
PRK05793	469	amidophosphoribosyltransferase; Provisional	99.57
PLN02440	479	amidophosphoribosyltransferase	99.56
PRK07349	500	amidophosphoribosyltransferase; Provisional	99.56
PRK09123	479	amidophosphoribosyltransferase; Provisional	99.54
COG2236	192	Predicted phosphoribosyltransferases [General func	99.54
PRK06781	471	amidophosphoribosyltransferase; Provisional	99.53
TIGR01251	308	ribP_PPkin ribose-phosphate pyrophosphokinase. In	99.52
TIGR01134	442	purF amidophosphoribosyltransferase. Alternate nam	99.52
PRK07272	484	amidophosphoribosyltransferase; Provisional	99.52
PRK08341	442	amidophosphoribosyltransferase; Provisional	99.51
PRK09246	501	amidophosphoribosyltransferase; Provisional	99.51
PRK06388	474	amidophosphoribosyltransferase; Provisional	99.51
PRK02812	330	ribose-phosphate pyrophosphokinase; Provisional	99.5
PLN02369	302	ribose-phosphate pyrophosphokinase	99.5
PTZ00145	439	phosphoribosylpyrophosphate synthetase; Provisiona	99.49
PRK07847	510	amidophosphoribosyltransferase; Provisional	99.49
PRK11595	227	DNA utilization protein GntX; Provisional	99.49
PRK07631	475	amidophosphoribosyltransferase; Provisional	99.49
COG0034	470	PurF Glutamine phosphoribosylpyrophosphate amidotr	99.48
PLN02297	326	ribose-phosphate pyrophosphokinase	99.46
PF14572	184	Pribosyl_synth: Phosphoribosyl synthetase-associat	99.43
PRK00129	209	upp uracil phosphoribosyltransferase; Reviewed	99.24
KOG1448	316	consensus Ribose-phosphate pyrophosphokinase [Nucl	99.24
COG1926	220	Predicted phosphoribosyltransferases [General func	99.21
TIGR01091	207	upp uracil phosphoribosyltransferase. that include	99.2
KOG0572	474	consensus Glutamine phosphoribosylpyrophosphate am	99.16
COG2065	179	PyrR Pyrimidine operon attenuation protein/uracil	99.15
KOG3367	216	consensus Hypoxanthine-guanine phosphoribosyltrans	99.06
PF15609	191	PRTase_2: Phosphoribosyl transferase	98.99
PLN02541	244	uracil phosphoribosyltransferase	98.38
COG0035	210	Upp Uracil phosphoribosyltransferase [Nucleotide t	98.18
PF14681	207	UPRTase: Uracil phosphoribosyltransferase; PDB: 1V	98.16
KOG1503	354	consensus Phosphoribosylpyrophosphate synthetase-a	97.99
PF15610	274	PRTase_3: PRTase ComF-like	96.17
KOG1017	267	consensus Predicted uracil phosphoribosyltransfera	93.89
PF13793	116	Pribosyltran_N: N-terminal domain of ribose phosph	93.82
KOG1377	261	consensus Uridine 5'- monophosphate synthase/orota	92.47
PRK02812	330	ribose-phosphate pyrophosphokinase; Provisional	91.45
PTZ00145	439	phosphoribosylpyrophosphate synthetase; Provisiona	90.66
PRK07199	301	phosphoribosylpyrophosphate synthetase; Provisiona	89.96
PRK04923	319	ribose-phosphate pyrophosphokinase; Provisional	89.73
PRK00553	332	ribose-phosphate pyrophosphokinase; Provisional	89.64
PRK01259	309	ribose-phosphate pyrophosphokinase; Provisional	89.59
TIGR01251	308	ribP_PPkin ribose-phosphate pyrophosphokinase. In	89.32
PRK02269	320	ribose-phosphate pyrophosphokinase; Provisional	88.93
PRK00934	285	ribose-phosphate pyrophosphokinase; Provisional	88.83
PLN02369	302	ribose-phosphate pyrophosphokinase	88.47
PRK03092	304	ribose-phosphate pyrophosphokinase; Provisional	86.73
PRK02458	323	ribose-phosphate pyrophosphokinase; Provisional	85.99
COG0462	314	PrsA Phosphoribosylpyrophosphate synthetase [Nucle	83.77

>PLN02293 adenine phosphoribosyltransferase

Probab=100.00  E-value=1.5e-35  Score=231.03  Aligned_cols=184  Identities=84%  Similarity=1.331  Sum_probs=167.7

Q ss_pred             CccccCCCCCChhHHHHhhcccccCCCCCCCceEEechhhhcCHHHHHHHHHHHHHHHhcCCCcEEEEeCCCChhhHHHH
Q 029741            1 MFAAENGLRGDPRLQGISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSI   80 (188)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~g~~~~d~~~ll~~~~~~~~l~~~la~~~~~~~~d~Iv~v~~gG~~~a~~l   80 (188)
                      |+.-.++=.+||++++|.+.+|+.|+||.+|+.|+|+..++.+|+.++.+++.+++++.+.++|+|++++.+|+++|..+
T Consensus         1 ~~~~~~~~~~~~~~~~l~~~i~~~~~~p~~gi~f~D~~~l~~~p~~~~~~~~~l~~~~~~~~~d~Ivg~e~~Gi~lA~~l   80 (187)
T PLN02293          1 MFAMENGDQGDPRLQGISSAIRVVPDFPKPGIMFQDITTLLLDPKAFKDTIDLFVERYRDMGISVVAGIEARGFIFGPPI   80 (187)
T ss_pred             CCccccccCCChhHHHHHHhCccCCCCCcCCcEEEECHHHhhCHHHHHHHHHHHHHHHhhcCCCEEEEeCCCchHHHHHH
Confidence            67777888999999999999999999999999999999999999999999999999998878999999999999999999


Q ss_pred             HHHhCCCeEEEeecCCCCCcccchheeeeccceeEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEE
Q 029741           81 ALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECAC  160 (188)
Q Consensus        81 A~~l~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~  160 (188)
                      |..|++|++++||.++.++.+.+..+..+++++.+++..+.+.+|++|+||||+++||+|+.++++.++++|++++++++
T Consensus        81 A~~Lg~p~v~~rK~~k~~~~~~~~~~~~~~g~~~l~l~~~~i~~G~rVlIVDDvitTG~T~~~~~~~l~~~Ga~~v~~~~  160 (187)
T PLN02293         81 ALAIGAKFVPLRKPGKLPGEVISEEYVLEYGTDCLEMHVGAVEPGERALVIDDLIATGGTLCAAINLLERAGAEVVECAC  160 (187)
T ss_pred             HHHHCCCEEEEEecCCCCCceEEEEEeccCCceEEEEEcCccCCCCEEEEEeccccchHHHHHHHHHHHHCCCEEEEEEE
Confidence            99999999999998887777666666666766667766566668999999999999999999999999999999999999


Q ss_pred             EeeChh--hhhccCCCCeEEEEeccc
Q 029741          161 VVGLPE--GQRRLDGKPLYILVEPRL  184 (188)
Q Consensus       161 l~~~~~--~~~~l~~~~~~~l~~~~~  184 (188)
                      +++.++  +++++.+.++++|+++++
T Consensus       161 ~~~~~~~~g~~~l~~~~~~sl~~~~~  186 (187)
T PLN02293        161 VIELPELKGREKLNGKPLFVLVESRG  186 (187)
T ss_pred             EEEcCCccHHHHhcCCceEEEEecCC
Confidence            999877  888898999999998764

>KOG1712 consensus Adenine phosphoribosyl transferases [Nucleotide transport and metabolism]

Probab=100.00  E-value=1.3e-35  Score=220.24  Aligned_cols=176  Identities=70%  Similarity=1.175  Sum_probs=168.9

Q ss_pred             CCCChhHHHHhhcccccCCCCCCCceEEechhhhcCHHHHHHHHHHHHHHHhc---CCCcEEEEeCCCChhhHHHHHHHh
Q 029741            8 LRGDPRLQGISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRD---MGISVVAGIEARGFVFGPSIALAI   84 (188)
Q Consensus         8 ~~~~~~~~~~~~~~r~~~~~~~~g~~~~d~~~ll~~~~~~~~l~~~la~~~~~---~~~d~Iv~v~~gG~~~a~~lA~~l   84 (188)
                      ..++|.++.|.+.+|..|+||++|++|.|+..++.||..++.+++.++.++++   .++|+|+|++.+|+.++..+|.++
T Consensus         2 ~~~d~~~~~ik~~ir~~pdFPk~GI~F~Di~pll~dP~af~~lidlf~~h~~~~~~~~Id~iaGlEaRGFLFGP~iAlal   81 (183)
T KOG1712|consen    2 LIADPRLKYIKTAIRVVPDFPKKGIMFQDITPLLLDPKAFKKLIDLFVDHYRETFEMKIDVIAGLEARGFLFGPSIALAL   81 (183)
T ss_pred             ccccHHHHHHHHhheeCCCCCCCceehhhhhhhhcCHHHHHHHHHHHHHHHHHHhcCcceEEEeeeecceecCcHHHHHh
Confidence            45789999999999999999999999999999999999999999999999987   469999999999999999999999


Q ss_pred             CCCeEEEeecCCCCCcccchheeeeccceeEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeC
Q 029741           85 GAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGL  164 (188)
Q Consensus        85 ~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~  164 (188)
                      |++++.+||..|.++++++.+|..+|+...+++.++.+.+|++|+||||++.||+|+.++.+++.+.|++++.+++++..
T Consensus        82 G~~fVPiRK~gKLPG~~i~~~Y~lEYg~d~~Emq~~Ai~~g~rvvvVDDllATGGTl~AA~~Ll~r~ga~vvE~~~vieL  161 (183)
T KOG1712|consen   82 GAGFVPIRKPGKLPGEVISESYELEYGEDRFEMQKGAIKPGQRVVVVDDLLATGGTLAAATELLERVGAEVVECACVIEL  161 (183)
T ss_pred             CCCeeecccCCCCCCceeEEEEeeecCccceeeeccccCCCCeEEEEechhhcCccHHHHHHHHHHhccEEEEEEEEEEc
Confidence            99999999999999999999999999999999998988899999999999999999999999999999999999999999


Q ss_pred             hh--hhhccCCCCeEEEEecc
Q 029741          165 PE--GQRRLDGKPLYILVEPR  183 (188)
Q Consensus       165 ~~--~~~~l~~~~~~~l~~~~  183 (188)
                      ++  ++++|.+.|+++|++..
T Consensus       162 ~~LkGr~kL~~~pl~~Ll~~~  182 (183)
T KOG1712|consen  162 PELKGREKLKGKPLFSLLEYQ  182 (183)
T ss_pred             cccCCccccCCCccEEEeecC
Confidence            88  99999999999999864

>PRK02304 adenine phosphoribosyltransferase; Provisional

Probab=100.00  E-value=2.4e-32  Score=211.36  Aligned_cols=172  Identities=55%  Similarity=0.986  Sum_probs=149.8

Q ss_pred             hHHHHhhcccccCCCCCCCceEEechhhhcCHHHHHHHHHHHHHHHhcCCCcEEEEeCCCChhhHHHHHHHhCCCeEEEe
Q 029741           13 RLQGISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLR   92 (188)
Q Consensus        13 ~~~~~~~~~r~~~~~~~~g~~~~d~~~ll~~~~~~~~l~~~la~~~~~~~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~~~   92 (188)
                      ||++|.++.|.+|.||.++..|.|+.+++.+|+.++.+++.+++++.+.++|+|+|++.+|+++|..+|..+++|+.+++
T Consensus         2 ~~~~l~~~~~~~~~~~~~~~~~~d~~~l~~~p~~~~~~~~~la~~~~~~~~d~Ivgv~~~Gi~~a~~la~~l~~p~~~~r   81 (175)
T PRK02304          2 MLEDLKSSIRTIPDFPKPGILFRDITPLLADPEAFREVIDALVERYKDADIDKIVGIEARGFIFGAALAYKLGIGFVPVR   81 (175)
T ss_pred             hHHHHHHhhccCCCCCCCCcEEEeChhHhcCHHHHHHHHHHHHHHhccCCCCEEEEEccchHHHHHHHHHHhCCCEEEEE
Confidence            78999999999999999999999999999999999999999999998778999999999999999999999999999888


Q ss_pred             ecCCCCCcccchheeeeccceeEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChh--hhhc
Q 029741           93 KPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRR  170 (188)
Q Consensus        93 k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~--~~~~  170 (188)
                      |..+.+.......++.+++.+.+.+..+...+|++||||||++|||+|+.++++.|+++|++++++++++++++  +.++
T Consensus        82 k~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~g~~VLIVDDivtTG~Tl~~~~~~l~~~Ga~~v~v~vl~~~~~~~g~~~  161 (175)
T PRK02304         82 KPGKLPRETISESYELEYGTDTLEIHKDAIKPGDRVLIVDDLLATGGTLEAAIKLLERLGAEVVGAAFVIELPDLGGREK  161 (175)
T ss_pred             cCCCCCCceEeEEEecccCceEEEEchhhcCCCCEEEEEeCCccccHHHHHHHHHHHHcCCEEEEEEEEEEcccccchhh
Confidence            77654443333334433444556654444579999999999999999999999999999999999999999987  6788


Q ss_pred             cCCCCeEEEEeccc
Q 029741          171 LDGKPLYILVEPRL  184 (188)
Q Consensus       171 l~~~~~~~l~~~~~  184 (188)
                      +.|+|++||++++.
T Consensus       162 l~~~~~~sl~~~~~  175 (175)
T PRK02304        162 LEGYPVKSLVKFDG  175 (175)
T ss_pred             cCCCceEEEEEeCC
Confidence            88999999999863

>TIGR01090 apt adenine phosphoribosyltransferase

Probab=99.97  E-value=1.1e-29  Score=195.52  Aligned_cols=165  Identities=49%  Similarity=0.928  Sum_probs=139.9

Q ss_pred             HhhcccccCCCCCCCceEEechhhhcCHHHHHHHHHHHHHHHhcCCCcEEEEeCCCChhhHHHHHHHhCCCeEEEeecCC
Q 029741           17 ISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNK   96 (188)
Q Consensus        17 ~~~~~r~~~~~~~~g~~~~d~~~ll~~~~~~~~l~~~la~~~~~~~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~~~k~~~   96 (188)
                      |.++++..|+||.+|+.|.|++.++.+|+.++.+++.+++++.+.++|+|+|++.+|+++|..+|..|++|+..++|..+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~d~~~~l~~p~~~~~~~~~la~~i~~~~~d~ivgi~~~G~~~A~~la~~L~~~~~~i~k~~~   80 (169)
T TIGR01090         1 LKQSIRSIPDFPKKGILFRDITPLLNNPELFRFLIDLLVERYKDANIDYIVGPEARGFIFGAALAYKLGVGFVPVRKPGK   80 (169)
T ss_pred             ChhhcccCCCCCCCCceeEeChhhhcCHHHHHHHHHHHHHHhccCCCCEEEeehhccHHHHHHHHHHHCCCEEEEEeCCC
Confidence            45789999999999999999999999999999999999999988789999999999999999999999999988877655


Q ss_pred             CCCcccchheeeeccceeEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChh--hhhccCC-
Q 029741           97 LPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLDG-  173 (188)
Q Consensus        97 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~--~~~~l~~-  173 (188)
                      .........++.+++.+.+.+......+|++|||||||+|||+|+.++++.|+++|++++++++++++.+  +.+.+.+ 
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDIitTG~Tl~~a~~~L~~~Ga~~v~~~~l~~~~~~~g~~~i~~~  160 (169)
T TIGR01090        81 LPGETISASYDLEYGKDQLEIHKDAIKPGQRVLIVDDLLATGGTAEATDELIRKLGGEVVEAAFLIELKDLNGRAKLEPN  160 (169)
T ss_pred             CCCceeeeEEeeccCceEEEEehhhcCCcCEEEEEeccccchHHHHHHHHHHHHcCCEEEEEEEEEEccccChHHHhccC
Confidence            4444333334434444455554334469999999999999999999999999999999999999999864  6777753 


Q ss_pred             CCeEEEEe
Q 029741          174 KPLYILVE  181 (188)
Q Consensus       174 ~~~~~l~~  181 (188)
                      +|+++|++
T Consensus       161 ~~~~sl~~  168 (169)
T TIGR01090       161 VPVFSLLE  168 (169)
T ss_pred             CceEEEEe
Confidence            89999985

A phylogenetic analysis suggested omitting the bi-directional best hit homologs from the spirochetes from the seed for this model and making only tentative predictions of adenine phosphoribosyltransferase function for this lineage.

>COG0503 Apt Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins [Nucleotide transport and metabolism]

Probab=99.96  E-value=2.1e-28  Score=189.80  Aligned_cols=171  Identities=46%  Similarity=0.803  Sum_probs=154.2

Q ss_pred             hHHHHhhcccccCCCCCCCceEEechhhhcCHHHHHHHHHHHHHHHhcCCCcEEEEeCCCChhhHHHHHHHhCCCeEEEe
Q 029741           13 RLQGISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLR   92 (188)
Q Consensus        13 ~~~~~~~~~r~~~~~~~~g~~~~d~~~ll~~~~~~~~l~~~la~~~~~~~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~~~   92 (188)
                      .++.|.+.+|..|.||.+|++|.|....+.++......++.+++++.+.++|.|++++.+|+++|..+|..||+|++.+|
T Consensus         4 ~~~~L~~~i~~~~~~~~~g~~f~d~~~~~~~~~~~~~~i~~~~~~~~~~~id~Iv~iea~Gi~~a~~vA~~Lgvp~v~vR   83 (179)
T COG0503           4 LMELLKDSIREIPDFPKGGILFVDITLLLGDPELLAKLIDELAERYKDDGIDKIVTIEARGIPLAAAVALELGVPFVPVR   83 (179)
T ss_pred             HHHHHHHHHhhcccccCCCceEEecchhhcCcHHHHHHHHHHHHHhcccCCCEEEEEccccchhHHHHHHHhCCCEEEEE
Confidence            57889999999999999999999999999999999999999999999888999999999999999999999999999999


Q ss_pred             ecCCCCCcccchheeeeccceeEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChh--hhhc
Q 029741           93 KPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRR  170 (188)
Q Consensus        93 k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~--~~~~  170 (188)
                      |.++.+.......+..+++...++++.+.+.+|++||||||++.||+|+.++.++++++|+++++++++++.++  ++.+
T Consensus        84 K~~kl~~~~~~~~~~~~~~~~~l~~~~~~l~~G~rVlIVDDllaTGgT~~a~~~Ll~~~ga~vvg~~~~ie~~~~~gr~~  163 (179)
T COG0503          84 KKGKLPEESVVETYYLEYGSETLELHKDALKPGDRVLIVDDLLATGGTALALIELLEQAGAEVVGAAFVIELGELDGRKK  163 (179)
T ss_pred             ecCCCCCcceeEEEEEeccceEEEEEhhhCCCCCEEEEEecchhcChHHHHHHHHHHHCCCEEEEEEEEEEcCccccchh
Confidence            98888777666667777766778888777779999999999999999999999999999999999999999987  5555


Q ss_pred             cC--CCCeEEEEecc
Q 029741          171 LD--GKPLYILVEPR  183 (188)
Q Consensus       171 l~--~~~~~~l~~~~  183 (188)
                      +.  +.++++|..+.
T Consensus       164 l~~~~~~v~~l~~~~  178 (179)
T COG0503         164 LEDDGLPVFSLVRIV  178 (179)
T ss_pred             hccCCceEEEEEecc
Confidence            55  47888887653

>PRK09219 xanthine phosphoribosyltransferase; Validated

Probab=99.96  E-value=2.9e-28  Score=190.31  Aligned_cols=169  Identities=25%  Similarity=0.356  Sum_probs=140.0

Q ss_pred             hhHHHHhhcccccCCCCCCCceEEe-chhhhcCHHHHHHHHHHHHHHHhcCCCcEEEEeCCCChhhHHHHHHHhCCCeEE
Q 029741           12 PRLQGISKAIRVVPDFPIPGIMFQD-ITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVP   90 (188)
Q Consensus        12 ~~~~~~~~~~r~~~~~~~~g~~~~d-~~~ll~~~~~~~~l~~~la~~~~~~~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~   90 (188)
                      ++.+++.+.-|.+|+    |++|++ +.++..||+.++.+++.+++++.+.++|+|+|++.+|+++|..+|.+|++|+++
T Consensus         3 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~P~~l~~i~~~la~~~~~~~~D~Ivg~e~~GiplA~~lA~~Lg~p~v~   78 (189)
T PRK09219          3 LLEERILKDGKVLSG----NILKVDSFLNHQVDPKLMNEIGKEFARRFKDEGITKILTIEASGIAPAVMAALALGVPVVF   78 (189)
T ss_pred             HHHHHHhcCCEEcCC----CEEEEhhhhccccCHHHHHHHHHHHHHHhccCCCCEEEEEccccHHHHHHHHHHHCCCEEE
Confidence            577888899999999    877744 445559999999999999999988889999999999999999999999999999


Q ss_pred             EeecCCCC--Ccccchh-eeeec-cceeEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChh
Q 029741           91 LRKPNKLP--GEVISEA-YVLEY-GTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE  166 (188)
Q Consensus        91 ~~k~~~~~--~~~~~~~-~~~~~-~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~  166 (188)
                      +||..+.+  +...... ++... ....++++.+.+.+|++||||||+++||+|+.+++++++++|++++++++++++.+
T Consensus        79 vRK~~k~~~~~~~~~~~~~~~~~~~~~~l~i~~~~i~~G~rVlIVDDviaTGgT~~a~~~lv~~aGa~vvgv~~lvd~~~  158 (189)
T PRK09219         79 AKKKKSLTLTDDVYTATVYSFTKQVTSTVSVSKKFLSEGDRVLIIDDFLANGQAALGLIDIIEQAGAKVAGIGIVIEKSF  158 (189)
T ss_pred             EEECCCCCCCCceEEEEEeeeccCceEEEEEEhhhCCCCCEEEEEeehhhcChHHHHHHHHHHHCCCEEEEEEEEEEccC
Confidence            99887653  2322211 11111 22356666666679999999999999999999999999999999999999999863


Q ss_pred             --hhhccC--CCCeEEEEeccc
Q 029741          167 --GQRRLD--GKPLYILVEPRL  184 (188)
Q Consensus       167 --~~~~l~--~~~~~~l~~~~~  184 (188)
                        +++++.  |+|+++|+++++
T Consensus       159 ~~g~~~l~~~g~~~~sl~~~~~  180 (189)
T PRK09219        159 QDGRKLLEEKGYRVESLARIAS  180 (189)
T ss_pred             ccHHHHHHhcCCcEEEEEEeee
Confidence              677764  899999999986

>PRK12560 adenine phosphoribosyltransferase; Provisional

Probab=99.96  E-value=1.1e-27  Score=187.00  Aligned_cols=168  Identities=27%  Similarity=0.374  Sum_probs=137.9

Q ss_pred             hHHHHhhcccccCCCCCCCc--eEEechhhhcCHHHHHHHHHHHHHHHhcCCCcEEEEeCCCChhhHHHHHHHhCCCeEE
Q 029741           13 RLQGISKAIRVVPDFPIPGI--MFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVP   90 (188)
Q Consensus        13 ~~~~~~~~~r~~~~~~~~g~--~~~d~~~ll~~~~~~~~l~~~la~~~~~~~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~   90 (188)
                      .++++...+|+++++|.+|+  .|.|+..++. |..++.+++.+++.+ +.++|+|+|++.+|+++|..+|..+++|+.+
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~l~-P~~l~~~~~~l~~~~-~~~~D~Ivg~e~~Gi~lA~~vA~~l~~p~~~   79 (187)
T PRK12560          2 LLKNLYKNARVVNSGKALTTVNEFTDQLPALR-PKVLKETAKEIIKYI-DKDIDKIVTEEDKGAPLATPVSLLSGKPLAM   79 (187)
T ss_pred             hhHHHHhhCCccCCCCCCCcceeEEeChhhcC-HHHHHHHHHHHHHHh-CCCCCEEEEEccccHHHHHHHHHhhCCCEEE
Confidence            36778889999999999998  8999999999 999999999999988 6689999999999999999999999999999


Q ss_pred             EeecCCCCCcccchheeeeccceeEE--EecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChh--
Q 029741           91 LRKPNKLPGEVISEAYVLEYGTDRLE--MHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--  166 (188)
Q Consensus        91 ~~k~~~~~~~~~~~~~~~~~~~~~~~--l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~--  166 (188)
                      ++|.+........  ....+++..++  +..+...+|++||||||+++||+|+.++++.++++|+.++++++++++.+  
T Consensus        80 ~rk~~~~~~~~~~--~~~~~~~~~~eg~~~~~~~~~G~rVlIVDDvitTG~T~~~ai~ll~~aGa~vv~v~~vvd~~~~~  157 (187)
T PRK12560         80 ARWYPYSLSELNY--NVVEIGSEYFEGVVYLNGIEKGDRVAIIDDTLSTGGTVIALIKAIENSGGIVSDVICVIEKTQNN  157 (187)
T ss_pred             eccCCCcccceeE--EeeeeeccceeeeeEccCCCCcCEEEEEEeccccCHHHHHHHHHHHHCCCEEEEEEEEEEecccc
Confidence            8876532211100  00112222222  22234568999999999999999999999999999999999999999975  


Q ss_pred             hhhcc---CCCCeEEEEeccc
Q 029741          167 GQRRL---DGKPLYILVEPRL  184 (188)
Q Consensus       167 ~~~~l---~~~~~~~l~~~~~  184 (188)
                      +++.+   .|+|++||+++++
T Consensus       158 g~~~l~~~~gv~v~sl~~~~~  178 (187)
T PRK12560        158 GRKKLFTQTGINVKSLVKIDV  178 (187)
T ss_pred             hHHHHhhccCCcEEEEEEEEE
Confidence            56666   4999999999886

>TIGR01744 XPRTase xanthine phosphoribosyltransferase

Probab=99.96  E-value=1.7e-27  Score=186.36  Aligned_cols=169  Identities=24%  Similarity=0.332  Sum_probs=139.2

Q ss_pred             ChhHHHHhhcccccCCCCCCCceEEe-chhhhcCHHHHHHHHHHHHHHHhcCCCcEEEEeCCCChhhHHHHHHHhCCCeE
Q 029741           11 DPRLQGISKAIRVVPDFPIPGIMFQD-ITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFV   89 (188)
Q Consensus        11 ~~~~~~~~~~~r~~~~~~~~g~~~~d-~~~ll~~~~~~~~l~~~la~~~~~~~~d~Iv~v~~gG~~~a~~lA~~l~~p~~   89 (188)
                      +++.+.|.+.-|.+|+    |+++.| ..+...||+.++.+++.+++++.+.++|+|++++.+|+++|..+|.+|++|++
T Consensus         2 ~~l~~~~~~~~~~~~~----~~i~~~~~~~~~~~p~~l~~v~~~l~~~~~~~~~d~Vv~~ea~Gi~la~~lA~~Lg~p~v   77 (191)
T TIGR01744         2 ELLKQKIKEEGVVLPG----GILKVDSFLNHQIDPKLMQEVGEEFARRFADDGITKIVTIEASGIAPAIMTGLKLGVPVV   77 (191)
T ss_pred             hHHHHHHhcCCEEcCC----CEEEEehhhccccCHHHHHHHHHHHHHHhccCCCCEEEEEccccHHHHHHHHHHHCCCEE
Confidence            4678889999999999    877765 33334799999999999999998878999999999999999999999999999


Q ss_pred             EEeecCCCCC--cccch---heeeeccceeEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeC
Q 029741           90 PLRKPNKLPG--EVISE---AYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGL  164 (188)
Q Consensus        90 ~~~k~~~~~~--~~~~~---~~~~~~~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~  164 (188)
                      ++||..+.+.  ..+..   ++.. ++...+.++.+.+.+|++||||||+++||+|+.++++.++++||+++++++++++
T Consensus        78 ~vRK~~k~~~~~~~~~~~~~s~~~-~~~~~l~i~~~~l~~G~rVLIVDDvvtTGgT~~a~~~ll~~aGa~Vvgv~~lvd~  156 (191)
T TIGR01744        78 FARKKKPLTLTDNLLTASVHSFTK-QTTSTVAVSGEFLSDQDRVLIIDDFLANGQAAHGLVDIAKQAGAKIAGIGIVIEK  156 (191)
T ss_pred             EEEeCCCCCCCCcceEEEEEEeec-CccEEEEEEHHhCCCcCEEEEEEehhccChHHHHHHHHHHHCCCEEEEEEEEEEe
Confidence            9998765432  11111   1111 2334566665556699999999999999999999999999999999999999998


Q ss_pred             hh--hhhccC--CCCeEEEEeccc
Q 029741          165 PE--GQRRLD--GKPLYILVEPRL  184 (188)
Q Consensus       165 ~~--~~~~l~--~~~~~~l~~~~~  184 (188)
                      .+  +++.|.  |+|++||+++++
T Consensus       157 ~~~~g~~~l~~~gvpv~sL~~~~~  180 (191)
T TIGR01744       157 SFQNGRQELVELGYRVESLARIQS  180 (191)
T ss_pred             cCccHHHHHHhcCCcEEEEEEEee
Confidence            73  777774  899999999986

This model represent a xanthine-specific phosphoribosyltransferase of Bacillus subtilis and closely related proteins from other species, mostly from other Gram-positive bacteria. The adjacent gene is a xanthine transporter; B. subtilis can import xanthine for the purine salvage pathway or for catabolism to obtain nitrogen.

>PRK13810 orotate phosphoribosyltransferase; Provisional

Probab=99.95  E-value=4.8e-27  Score=183.15  Aligned_cols=143  Identities=26%  Similarity=0.397  Sum_probs=126.6

Q ss_pred             CCceEEechhhhcCHHHHHHHHHHHHHHHhcCCCcEEEEeCCCChhhHHHHHHHhCCCeEEEeecCCCCCcccchheeee
Q 029741           30 PGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLE  109 (188)
Q Consensus        30 ~g~~~~d~~~ll~~~~~~~~l~~~la~~~~~~~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~~~k~~~~~~~~~~~~~~~~  109 (188)
                      ++..|+|+..++.+|+.++.+++.+++.+.+.++|.|+|++.+|+++|..+|..+|+|++++||..+.            
T Consensus        41 ~s~~yiD~~~~~~~p~~~~~i~~~la~~~~~~~~d~I~g~~~~GiplA~~vA~~l~~p~v~vRK~~k~------------  108 (187)
T PRK13810         41 KSKYYIDIKKASTDPKTLKLIARQAALRIKEMDVDTVAGVELGGVPLATAVSLETGLPLLIVRKSVKD------------  108 (187)
T ss_pred             cCCEEEECchhcCCHHHHHHHHHHHHHHhccCCCCEEEEEccchHHHHHHHHHHhCCCEEEEecCCCc------------
Confidence            46899999999999999999999999999887899999999999999999999999999999987642            


Q ss_pred             ccceeEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChh-hhhccC--CCCeEEEEeccccc
Q 029741          110 YGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE-GQRRLD--GKPLYILVEPRLSV  186 (188)
Q Consensus       110 ~~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~-~~~~l~--~~~~~~l~~~~~~~  186 (188)
                      ++.....  .+.+.+|++|+||||++|||+|+.++++.++++|++++++++++++.+ ++++++  |+|+++|+++++.+
T Consensus       109 ~g~~~~~--~g~~~~g~rVlIVDDVitTGgS~~~~i~~l~~~Ga~V~~v~vlvdr~~g~~~~l~~~gi~~~sl~~~~~~~  186 (187)
T PRK13810        109 YGTGSRF--VGDLKPEDRIVMLEDVTTSGGSVREAIEVVREAGAYIKYVITVVDREEGAEENLKEADVELVPLVSASDLL  186 (187)
T ss_pred             cCCCceE--EccCCCcCEEEEEEeccCCChHHHHHHHHHHHCCCEEEEEEEEEECCcChHHHHHHcCCcEEEEEEHHHhh
Confidence            2222221  245569999999999999999999999999999999999999999977 677786  99999999998854

>TIGR01743 purR_Bsub pur operon repressor, Bacillus subtilis type

Probab=99.95  E-value=7e-27  Score=190.43  Aligned_cols=166  Identities=21%  Similarity=0.362  Sum_probs=141.4

Q ss_pred             hhHHHHhhcccccCCCCCCCceEEechhhhcCHHHHHHHHHHHHHHHhcCCCcEEEEeCCCChhhHHHHHHHhCCCeEEE
Q 029741           12 PRLQGISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPL   91 (188)
Q Consensus        12 ~~~~~~~~~~r~~~~~~~~g~~~~d~~~ll~~~~~~~~l~~~la~~~~~~~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~~   91 (188)
                      ++.++|.++-|.+|+    |+  +++..++.||..++.+++.++.++.+.++|+|++++.+|+++|..+|.+||+|++++
T Consensus        84 ~l~~~l~~~~rilpg----g~--~~~s~ll~~P~~l~~ig~~la~~~~~~~iD~VvgvetkGIpLA~avA~~L~vp~viv  157 (268)
T TIGR01743        84 ELCQSLSEPERILPG----GY--LYLTDILGKPSILSKIGKILASVFAEREIDAVMTVATKGIPLAYAVASVLNVPLVIV  157 (268)
T ss_pred             HHHHHHHHCCCcccC----Ce--EEechhhcCHHHHHHHHHHHHHHhcCCCCCEEEEEccchHHHHHHHHHHHCCCEEEE
Confidence            567788888899988    64  458899999999999999999999888899999999999999999999999999999


Q ss_pred             eecCCC-CCcccchheeeecc--ceeEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChhhh
Q 029741           92 RKPNKL-PGEVISEAYVLEYG--TDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQ  168 (188)
Q Consensus        92 ~k~~~~-~~~~~~~~~~~~~~--~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~~~  168 (188)
                      ||..+. ++.+++.+|.....  .+.++++.+.+.+|++||||||+++||+|+.+++++++++|++++++++++++.++.
T Consensus       158 RK~~K~t~g~~vs~nY~sgs~~~ie~m~l~k~~l~~G~rVLIVDDv~~TGgTi~a~i~Ll~e~Ga~VvGv~vlve~~~~~  237 (268)
T TIGR01743       158 RKDSKVTEGSTVSINYVSGSSNRIQTMSLAKRSLKTGSKVLIIDDFMKAGGTINGMINLLDEFDAEVAGIGVLIDNEGVD  237 (268)
T ss_pred             EECCCCCCCCcEEEEEEcccCccceEEEEehhhCCCcCEEEEEeeecccCHHHHHHHHHHHHCCCEEEEEEEEEECCCCh
Confidence            998765 45555555533222  125667666677999999999999999999999999999999999999999998766


Q ss_pred             hccCCCCeEEEEeccc
Q 029741          169 RRLDGKPLYILVEPRL  184 (188)
Q Consensus       169 ~~l~~~~~~~l~~~~~  184 (188)
                      +++ +.+++||+++++
T Consensus       238 ~~l-~~~~~SL~~~~~  252 (268)
T TIGR01743       238 EKL-VDDYMSLLTLSN  252 (268)
T ss_pred             HHc-CCCceEEEEEee
Confidence            666 458999998876

This model represents the puring operon repressor PurR of low-GC Gram-positive bacteria. This homodimeric repressor contains a large region homologous to phosphoribosyltransferases and is inhibited by 5-phosphoribosyl 1-pyrophosphate.

>PRK09213 pur operon repressor; Provisional

Probab=99.95  E-value=1.1e-26  Score=189.61  Aligned_cols=166  Identities=24%  Similarity=0.418  Sum_probs=140.1

Q ss_pred             hhHHHHhhcccccCCCCCCCceEEechhhhcCHHHHHHHHHHHHHHHhcCCCcEEEEeCCCChhhHHHHHHHhCCCeEEE
Q 029741           12 PRLQGISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPL   91 (188)
Q Consensus        12 ~~~~~~~~~~r~~~~~~~~g~~~~d~~~ll~~~~~~~~l~~~la~~~~~~~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~~   91 (188)
                      ++.++|.+..|-+|+    |  |+++..++.+|..++.+++.+++++.+.++|+|++++.+|+++|..+|.+|++|++++
T Consensus        86 ~L~~~L~~~~rilpG----g--f~y~sdll~~P~~l~~i~~~la~~~~~~~iD~Vvtvet~GIplA~~vA~~L~vp~viv  159 (271)
T PRK09213         86 ELCERLSEPDRILPG----G--YLYLSDLLGNPSILRKIGRIIASAFADKKIDAVMTVETKGIPLAYAVANYLNVPFVIV  159 (271)
T ss_pred             HHHHHHHhCCccCCC----C--eEEeCcccCCHHHHHHHHHHHHHHhcccCCCEEEEEccccHHHHHHHHHHHCCCEEEE
Confidence            455677777888888    5  4558889999999999999999999888899999999999999999999999999999


Q ss_pred             eecCCC-CCcccchheeeecc--ceeEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChhhh
Q 029741           92 RKPNKL-PGEVISEAYVLEYG--TDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQ  168 (188)
Q Consensus        92 ~k~~~~-~~~~~~~~~~~~~~--~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~~~  168 (188)
                      ||..+. ++.+++.+|.....  .+.++++.+.+.+|++||||||+++||+|+.+++++++++|++++++++++++.++.
T Consensus       160 RK~~K~~~G~~vs~~y~sgs~~~ie~m~L~~~~l~~G~rVLIVDDv~~TGgTi~a~i~Ll~e~Ga~VvGv~vlVd~~~~~  239 (271)
T PRK09213        160 RRDSKVTEGSTVSINYVSGSSKRIETMSLSKRSLKEGSRVLIVDDFMKAGGTINGMISLLKEFDAEVVGIGVLVETKEPE  239 (271)
T ss_pred             EECCCCCCCCcEEEEEEecccccceEEEEeHhhcCCcCEEEEEeeecccCHhHHHHHHHHHHCCCEEEEEEEEEECCCCh
Confidence            997765 45555555532211  125677766677999999999999999999999999999999999999999998766


Q ss_pred             hccCCCCeEEEEeccc
Q 029741          169 RRLDGKPLYILVEPRL  184 (188)
Q Consensus       169 ~~l~~~~~~~l~~~~~  184 (188)
                      +++ ..+++||+++++
T Consensus       240 ~~l-~~~~~SL~~~~~  254 (271)
T PRK09213        240 ERL-VDDYVSLLKLSE  254 (271)
T ss_pred             hhc-CCceEEEEEEeh
Confidence            666 458999999876

>PRK08558 adenine phosphoribosyltransferase; Provisional

Probab=99.94  E-value=2.1e-25  Score=179.98  Aligned_cols=160  Identities=23%  Similarity=0.395  Sum_probs=129.0

Q ss_pred             HhhcccccCCCCCCCceEEechhhhcCHHHHHHHHHHHHHHHhcCCCcEEEEeCCCChhhHHHHHHHhCCCeEEEeecCC
Q 029741           17 ISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNK   96 (188)
Q Consensus        17 ~~~~~r~~~~~~~~g~~~~d~~~ll~~~~~~~~l~~~la~~~~~~~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~~~k~~~   96 (188)
                      +.+.+++.|+    |  |+|+..++.||+.++.+++.++.++.+.++|+|++++.+|+++|..+|..||+|++++||.++
T Consensus        72 l~~ri~~~~~----g--y~d~~~il~~p~~~~~v~~~la~~~~~~~~D~Vvtv~~~GI~lA~~lA~~L~~p~vi~Rk~~~  145 (238)
T PRK08558         72 VKARIKVDDE----G--YVDNSSVVFDPSFLRLIAPVVAERFMGLRVDVVLTAATDGIPLAVAIASYFGADLVYAKKSKE  145 (238)
T ss_pred             HHhhcccCCC----C--EEEchhhhcCHHHHHHHHHHHHHHccCCCCCEEEEECcccHHHHHHHHHHHCcCEEEEEecCC
Confidence            3444444554    4  899999999999999999999999987789999999999999999999999999999887654


Q ss_pred             CC-Ccccchheee-eccc-eeEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChh-hhhccC
Q 029741           97 LP-GEVISEAYVL-EYGT-DRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE-GQRRLD  172 (188)
Q Consensus        97 ~~-~~~~~~~~~~-~~~~-~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~-~~~~l~  172 (188)
                      .. +.++. +|.. +.+. ..+++..+.+.+|++||||||+++||+|+..++++++++|+++++++++++..+ +.+++.
T Consensus       146 ~~~~~~v~-~y~s~s~~~~~~~~l~~~~l~~G~rVLIVDDvi~TG~Tl~~~~~ll~~~ga~vvgv~vlv~~~~~~~~~l~  224 (238)
T PRK08558        146 TGVEKFYE-EYQRLASGIEVTLYLPASALKKGDRVLIVDDIIRSGETQRALLDLARQAGADVVGVFFLIAVGEVGIDRAR  224 (238)
T ss_pred             CCCcceEE-EeeccCCCceeEEEecHHHcCCcCEEEEEecccccCHHHHHHHHHHHHcCCEEEEEEEEEecCchHHHHHh
Confidence            32 22222 2221 1111 245555455679999999999999999999999999999999999999999977 466663


Q ss_pred             ---CCCeEEEEecc
Q 029741          173 ---GKPLYILVEPR  183 (188)
Q Consensus       173 ---~~~~~~l~~~~  183 (188)
                         ++|+.+|++++
T Consensus       225 ~~~~vpv~sl~~~~  238 (238)
T PRK08558        225 EETDAPVDALYTLE  238 (238)
T ss_pred             HhcCCCEEEEEEeC
Confidence               89999999874

>PRK13809 orotate phosphoribosyltransferase; Provisional

Probab=99.94  E-value=1.8e-25  Score=176.69  Aligned_cols=146  Identities=19%  Similarity=0.278  Sum_probs=126.4

Q ss_pred             CCceEEechhhhcCHHHHHHHHHHHHHHHhcCCCcEEEEeCCCChhhHHHHHHHhCCCeEEEeecCCCCCcccchheeee
Q 029741           30 PGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLE  109 (188)
Q Consensus        30 ~g~~~~d~~~ll~~~~~~~~l~~~la~~~~~~~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~~~k~~~~~~~~~~~~~~~~  109 (188)
                      .+..|+|+..++.+|..++.+++.+++.+.+.++|+|+|++.+|+++|..+|..+++|+.+.||..+.++..        
T Consensus        35 ~S~~y~D~~~i~~~p~~l~~i~~~l~~~~~~~~~d~IvG~~~~Gi~~A~~vA~~l~~p~~~~RK~~K~~G~~--------  106 (206)
T PRK13809         35 ETPIYVDMRLVISSPEVLQTIATLIWRLRPSFNSSLLCGVPYTALTLATSISLKYNIPMVLRRKELKNVDPS--------  106 (206)
T ss_pred             CCCEEEEChhhccCHHHHHHHHHHHHHHhccCCCCEEEEecCccHHHHHHHHHHhCCCEEEEeCCCCCCCCc--------
Confidence            348999999999999999999999999987778999999999999999999999999999999877654431        


Q ss_pred             ccceeEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChh-hhhccC--CCCeEEEEeccccc
Q 029741          110 YGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE-GQRRLD--GKPLYILVEPRLSV  186 (188)
Q Consensus       110 ~~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~-~~~~l~--~~~~~~l~~~~~~~  186 (188)
                         +.+.. .+...+|++|+||||++|||+|+.++++.|+++|++++++++++++.. +++++.  |+|++||+++++.+
T Consensus       107 ---~~~~~-~g~~~~g~~VlIVDDViTTG~Ti~~a~~~L~~~G~~vv~v~vlvdr~~~~~~~l~~~gi~v~sl~~~~~l~  182 (206)
T PRK13809        107 ---DAIKV-EGLFTPGQTCLVINDMVSSGKSIIETAVALEEEGLVVREALVFLDRQKGACQPLGPQGIKLSSVFTVPDLI  182 (206)
T ss_pred             ---CEEEE-ccccCCCCEEEEEEeccccCHHHHHHHHHHHHCCCEEEEEEEEEECcccHHHHHHhcCCCEEEEEEHHHHH
Confidence               12322 234569999999999999999999999999999999999999999875 666664  89999999998854


Q ss_pred             c
Q 029741          187 N  187 (188)
Q Consensus       187 ~  187 (188)
                      +
T Consensus       183 ~  183 (206)
T PRK13809        183 K  183 (206)
T ss_pred             H
Confidence            3

>PRK13812 orotate phosphoribosyltransferase; Provisional

Probab=99.93  E-value=9.6e-25  Score=168.87  Aligned_cols=140  Identities=25%  Similarity=0.338  Sum_probs=120.4

Q ss_pred             CceEEechhhhcCHHHHHHHHHHHHHHHhcCCCcEEEEeCCCChhhHHHHHHHhCCCeEEEeecCCCCCcccchheeeec
Q 029741           31 GIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEY  110 (188)
Q Consensus        31 g~~~~d~~~ll~~~~~~~~l~~~la~~~~~~~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~~~k~~~~~~~~~~~~~~~~~  110 (188)
                      +..|+|...+..+|+.++.+++.+++.+.+.  |+|+|++.+|+++|..+|..+++|+++.||.++.            +
T Consensus        29 S~~yid~~~~~~~p~~~~~i~~~l~~~i~~~--d~ivg~~~ggi~lA~~lA~~l~~p~~~~rk~~k~------------y   94 (176)
T PRK13812         29 SEYYVDKYLFETDPDCLRLIAEAFADRIDED--TKLAGVALGAVPLVAVTSVETGVPYVIARKQAKE------------Y   94 (176)
T ss_pred             CCEEEeCeeccCCHHHHHHHHHHHHHHhccC--CEEEEeecchHHHHHHHHHHHCCCEEEEeccCCc------------C
Confidence            4789999999999999999999999998643  8999999999999999999999999999987642            2


Q ss_pred             cceeEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChh-hhhccC--CCCeEEEEeccccc
Q 029741          111 GTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE-GQRRLD--GKPLYILVEPRLSV  186 (188)
Q Consensus       111 ~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~-~~~~l~--~~~~~~l~~~~~~~  186 (188)
                      ++....  .+...+|++|+||||+++||+|+.++++.|+++|++++++++++++.+ ++++++  |+|+++|+++++..
T Consensus        95 g~~~~~--~g~~~~g~~VlIVDDvitTG~Tl~~~~~~l~~~Ga~vv~~~vlvdr~~~~~~~l~~~g~~v~sL~~~~~~~  171 (176)
T PRK13812         95 GTGNRI--EGRLDEGEEVVVLEDIATTGQSAVDAVEALREAGATVNRVLVVVDREEGARENLADHDVELEALVTASDLL  171 (176)
T ss_pred             CCCCeE--EecCCCcCEEEEEEEeeCCCHHHHHHHHHHHHCCCeEEEEEEEEECCcchHHHHHhcCCcEEEEEeHHHHH
Confidence            222111  134458999999999999999999999999999999999999999986 566664  99999999998743

>PRK13811 orotate phosphoribosyltransferase; Provisional

Probab=99.93  E-value=2.1e-24  Score=166.22  Aligned_cols=139  Identities=27%  Similarity=0.412  Sum_probs=118.4

Q ss_pred             CceEEechhhhcCHHHHHHHHHHHHHHHhcCCCcEEEEeCCCChhhHHHHHHHhCCCeEEEeecCCCCCcccchheeeec
Q 029741           31 GIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEY  110 (188)
Q Consensus        31 g~~~~d~~~ll~~~~~~~~l~~~la~~~~~~~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~~~k~~~~~~~~~~~~~~~~~  110 (188)
                      +..|+|+..++.+|+.++.+++.+++.+   ++|+|++++.+|+++|..+|..+|+|++++||.++..+           
T Consensus        28 s~~y~d~~~l~~~p~~~~~l~~~l~~~~---~~d~Vvg~~~gGi~~A~~~a~~l~~p~~~~rK~~k~~g-----------   93 (170)
T PRK13811         28 SRYYIDIKTAITHPALLKEIAAEVAKRY---DFDVVAGVAVGGVPLAVAVSLAAGKPYAIIRKEAKDHG-----------   93 (170)
T ss_pred             CCEEEeCchhccCHHHHHHHHHHHHhhC---CCCEEEecCcCcHHHHHHHHHHHCCCEEEEecCCCCCC-----------
Confidence            3678899999999999999999987654   68999999999999999999999999999988764322           


Q ss_pred             cceeEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChh-hhhccC--CCCeEEEEecccccc
Q 029741          111 GTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE-GQRRLD--GKPLYILVEPRLSVN  187 (188)
Q Consensus       111 ~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~-~~~~l~--~~~~~~l~~~~~~~~  187 (188)
                       ......  +. .+|++|+||||+++||+|+.++++.|+++||+++++++++++.+ ++++++  |+|+++|+++++..|
T Consensus        94 -~~~~~~--g~-~~g~~VlIVDDvi~TG~T~~~~~~~l~~~Ga~v~~~~~~vdr~~g~~~~l~~~gv~~~sl~~~~~~~~  169 (170)
T PRK13811         94 -KAGLII--GD-VKGKRVLLVEDVTTSGGSALYGIEQLRAAGAVVDDVVTVVDREQGAEELLAELGITLTPLVRVSELLN  169 (170)
T ss_pred             -CcceEE--cc-cCCCEEEEEEecccccHHHHHHHHHHHHCCCeEEEEEEEEECCccHHHHHHhcCCcEEEEeEHHHHhc
Confidence             111221  33 58999999999999999999999999999999999999999987 466664  999999999987654

>PRK07322 adenine phosphoribosyltransferase; Provisional

Probab=99.92  E-value=1.2e-23  Score=163.17  Aligned_cols=162  Identities=25%  Similarity=0.377  Sum_probs=125.5

Q ss_pred             HhhcccccCCCCCCCceEEechhhhcCHHHHHHHHHHHHHHHhcCCCcEEEEeCCCChhhHHHHHHHhCCCeEEEeecCC
Q 029741           17 ISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNK   96 (188)
Q Consensus        17 ~~~~~r~~~~~~~~g~~~~d~~~ll~~~~~~~~l~~~la~~~~~~~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~~~k~~~   96 (188)
                      +...+|++|.|+..+..+++..+++.||..++.+++.+++.+.+ ++|+|++++.+|+++|..+|..+++|++.++|..+
T Consensus         8 ~~~~~~~~~~~~~~~~~~i~~~k~~~dp~l~~~~~~~La~~l~~-~~d~Iv~v~~gGiplA~~lA~~L~~p~~~~~k~~~   86 (178)
T PRK07322          8 VGGVTRELPLIRVGPDLAIALFVILGDTELTEAAAEALAKRLPT-EVDVLVTPETKGIPLAHALSRRLGKPYVVARKSRK   86 (178)
T ss_pred             EcCEEeecCeeEeCCCCEEEEEhhhCCHHHHHHHHHHHHHHcCC-CCCEEEEeccCCHHHHHHHHHHHCCCEEEEEEeCC
Confidence            45678999999998888999999999999999999999999976 78999999999999999999999999988776543


Q ss_pred             C--CCcccchheeeeccce-eEEEecCC--CCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChhhhhcc
Q 029741           97 L--PGEVISEAYVLEYGTD-RLEMHVGA--IEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQRRL  171 (188)
Q Consensus        97 ~--~~~~~~~~~~~~~~~~-~~~l~~~~--~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~~~~~l  171 (188)
                      .  +.......++...+.. .+.+....  ..+|++||||||+++||+|+.++++.|+++|+++++++++++.++...++
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~aa~~~L~~~GA~~V~~~~v~~~~~~~~~~  166 (178)
T PRK07322         87 PYMQDPIIQEVVSITTGKPQLLVLDGADAEKLKGKRVAIVDDVVSTGGTLTALERLVERAGGQVVAKAAIFAEGDASNRL  166 (178)
T ss_pred             CCCCCceEEEEEEEEeccceEEEecCccccccCCCEEEEEeccccccHHHHHHHHHHHHcCCEEEEEEEEEEcCCCCCCC
Confidence            2  1211111111111211 22222111  24899999999999999999999999999999999999999998754444


Q ss_pred             CCCCeEEEEec
Q 029741          172 DGKPLYILVEP  182 (188)
Q Consensus       172 ~~~~~~~l~~~  182 (188)
                      +   +..|.++
T Consensus       167 ~---~~~~~~~  174 (178)
T PRK07322        167 D---VIYLAHL  174 (178)
T ss_pred             c---eEeeccc
Confidence            3   4555444

>TIGR00336 pyrE orotate phosphoribosyltransferase

Probab=99.92  E-value=6.6e-24  Score=163.93  Aligned_cols=140  Identities=18%  Similarity=0.293  Sum_probs=121.0

Q ss_pred             CceEEechhhhcCHHHHHHHHHHHHHHHhc-CCCcEEEEeCCCChhhHHHHHHHhCCC-----eEEEeecCCCCCcccch
Q 029741           31 GIMFQDITTLLLDHKAFKDTVDIFVDRYRD-MGISVVAGIEARGFVFGPSIALAIGAK-----FVPLRKPNKLPGEVISE  104 (188)
Q Consensus        31 g~~~~d~~~ll~~~~~~~~l~~~la~~~~~-~~~d~Iv~v~~gG~~~a~~lA~~l~~p-----~~~~~k~~~~~~~~~~~  104 (188)
                      +..|+|+..++.+|+..+.+++.+++.+.+ .++|+|+|++.+|+++|..+|..+++|     +.+.+|.++..+.    
T Consensus        22 s~~y~d~~~i~~~p~~~~~v~~~~~~~~~~~~~~d~Ivg~~~gG~~~A~~la~~l~~~~~~~~~~~~rk~~k~~g~----   97 (173)
T TIGR00336        22 SPYYFNIKLFNTGPELANLIARYAAAIIKSHLEFDVIAGPALGGIPIATAVSVKLAKPGGDIPLCFNRKEAKDHGE----   97 (173)
T ss_pred             CCEEEECeecCChHHHHHHHHHHHHHHHHhcCCCCEEEccccChHHHHHHHHHHhcCcCCCceEEEEcCCcccCCC----
Confidence            578999999999999999999999999986 589999999999999999999999999     8887776542221    


Q ss_pred             heeeeccceeEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChh--hhhccC---CCCeEEE
Q 029741          105 AYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLD---GKPLYIL  179 (188)
Q Consensus       105 ~~~~~~~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~--~~~~l~---~~~~~~l  179 (188)
                              ....  .+...+|++||||||+++||+|+.++++.|+++|++++++++++++.+  +++++.   |+|++||
T Consensus        98 --------~~~~--~g~~~~g~~VlIVDDvi~TG~Tl~~a~~~l~~~Ga~v~~~~vlvdr~~~~~~~~l~~~~gv~~~sl  167 (173)
T TIGR00336        98 --------GGNI--EGELLEGDKVVVVEDVITTGTSILEAVEIIQAAGGQVAGVIIAVDRQERSAGQEFEKEYGLPVISL  167 (173)
T ss_pred             --------CCce--ecCCCCCCEEEEEeccccChHHHHHHHHHHHHcCCeEEEEEEEEecCchhHHHHHHHhcCCeEEEE
Confidence                    1111  134568999999999999999999999999999999999999999976  666773   9999999


Q ss_pred             Eeccc
Q 029741          180 VEPRL  184 (188)
Q Consensus       180 ~~~~~  184 (188)
                      +++++
T Consensus       168 ~~~~~  172 (173)
T TIGR00336       168 ITLKD  172 (173)
T ss_pred             EeHhh
Confidence            99876

The conserved Lys (K) residue at position 101 of the seed alignment has been proposed as the active site for the enzyme.

>PRK00455 pyrE orotate phosphoribosyltransferase; Validated

Probab=99.92  E-value=8.4e-24  Score=167.10  Aligned_cols=143  Identities=29%  Similarity=0.384  Sum_probs=121.4

Q ss_pred             CceEEechhhhcCHHHHHHHHHHHHHHHhcC--CCcEEEEeCCCChhhHHHHHHHhCCCeEEEeecCCCCCcccchheee
Q 029741           31 GIMFQDITTLLLDHKAFKDTVDIFVDRYRDM--GISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVL  108 (188)
Q Consensus        31 g~~~~d~~~ll~~~~~~~~l~~~la~~~~~~--~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~~~k~~~~~~~~~~~~~~~  108 (188)
                      +..|+|+..++.+|+.++.+++.+++++.+.  ++|+|+|++.+|+++|..+|..|++|+++.+|..+..+.        
T Consensus        31 s~~y~d~~~i~~~p~~~~~~~~~la~~i~~~~~~~d~Ivgi~~gG~~~A~~la~~L~~~~~~~rk~~~~~g~--------  102 (202)
T PRK00455         31 SPYYFDCRKLLSYPEALALLGRFLAEAIKDSGIEFDVVAGPATGGIPLAAAVARALDLPAIFVRKEAKDHGE--------  102 (202)
T ss_pred             CCeeEeChhhhcCHHHHHHHHHHHHHHHHhcCCCCCEEEecccCcHHHHHHHHHHhCCCEEEEecccCCCCC--------
Confidence            3689999999999999999999999999876  899999999999999999999999999998875432111        


Q ss_pred             eccceeEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChh-hhhccC--CCCeEEEEecccc
Q 029741          109 EYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE-GQRRLD--GKPLYILVEPRLS  185 (188)
Q Consensus       109 ~~~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~-~~~~l~--~~~~~~l~~~~~~  185 (188)
                         ...+.   ....+|++||||||+++||+|+.++++.|+++|++++++++++++.+ ++++++  |+|++||+++++.
T Consensus       103 ---~~~~~---~~~~~g~~VliVDDvi~tG~Tl~~~~~~l~~~Ga~~v~~~vlv~~~~~~~~~~~~~g~~~~sl~~~~~~  176 (202)
T PRK00455        103 ---GGQIE---GRRLFGKRVLVVEDVITTGGSVLEAVEAIRAAGAEVVGVAVIVDRQSAAQEVFADAGVPLISLITLDDL  176 (202)
T ss_pred             ---CceEE---ccCCCCCEEEEEecccCCcHHHHHHHHHHHHcCCEEEEEEEEEECcchHHHHHHhcCCcEEEEeeHHHH
Confidence               11122   22347999999999999999999999999999999999999999964 555554  9999999999885


Q ss_pred             cc
Q 029741          186 VN  187 (188)
Q Consensus       186 ~~  187 (188)
                      ++
T Consensus       177 ~~  178 (202)
T PRK00455        177 LE  178 (202)
T ss_pred             HH
Confidence            43

>PRK02277 orotate phosphoribosyltransferase-like protein; Provisional

Probab=99.92  E-value=2.4e-23  Score=164.23  Aligned_cols=148  Identities=22%  Similarity=0.354  Sum_probs=119.0

Q ss_pred             CCCCceEEechhhhcCHHHHHHHHHHHHHHHh--cCCCcEEEEeCCCChhhHHHHHHHhCCCeEEEeecCCCCCcccchh
Q 029741           28 PIPGIMFQDITTLLLDHKAFKDTVDIFVDRYR--DMGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEA  105 (188)
Q Consensus        28 ~~~g~~~~d~~~ll~~~~~~~~l~~~la~~~~--~~~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~~~k~~~~~~~~~~~~  105 (188)
                      |.++..|+|+..+..+|+.++.+++.+++.+.  +.++|+|+|++.+|+++|..+|..|++|+...++.+..++..    
T Consensus        49 ~~~~~~yid~~~~~~~~~~l~~i~~~la~~i~~~~~~~D~Ivgi~~gG~~~A~~lA~~L~~~~~~~~~~k~~~~~~----  124 (200)
T PRK02277         49 PAPKDIHIDWSSIGSSSSRLRYIASAMADMLEKEDEEVDVVVGIAKSGVPLATLVADELGKDLAIYHPKKWDHGEG----  124 (200)
T ss_pred             CCCCCEEEEChhhccCHHHHHHHHHHHHHHHHhcCCCCCEEEeeccCCHHHHHHHHHHhCCCcEEEeccccccccc----
Confidence            55688999999999999999999999999884  347899999999999999999999999997766443211110    


Q ss_pred             eeeeccceeEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChhhhhccCCCCeEEEEeccc
Q 029741          106 YVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQRRLDGKPLYILVEPRL  184 (188)
Q Consensus       106 ~~~~~~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~~~~~l~~~~~~~l~~~~~  184 (188)
                         ......+... ....+|++|+||||++|||+|+.++++.|+++|+++++++++++++ +.+.+.|+|++||+++..
T Consensus       125 ---~~~~~~~~~~-~~~~~gk~VlIVDDVitTG~Tl~~ai~~l~~~Ga~~v~v~vlvdk~-g~~~~~~vpv~sl~~~~~  198 (200)
T PRK02277        125 ---EKKTGSFSRN-FASVEGKRCVIVDDVITSGTTMKETIEYLKEHGGKPVAVVVLIDKS-GIDEIDGVPVYSLIRVVR  198 (200)
T ss_pred             ---ccccceeccc-cccCCcCEEEEEeeccCchHHHHHHHHHHHHcCCEEEEEEEEEECc-chhhhcCCCeEEEEEEEe
Confidence               0001111110 1235899999999999999999999999999999999999999997 455677999999998753

>TIGR01367 pyrE_Therm orotate phosphoribosyltransferase, Thermus family

Probab=99.91  E-value=3.2e-23  Score=161.83  Aligned_cols=138  Identities=25%  Similarity=0.460  Sum_probs=118.1

Q ss_pred             CCceEEechhhhcCHHHHHHHHHHHHHHHhcC--CCcEEEEeCCCChhhHHHHHHHhCCCeEEEeecCCCCCcccchhee
Q 029741           30 PGIMFQDITTLLLDHKAFKDTVDIFVDRYRDM--GISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYV  107 (188)
Q Consensus        30 ~g~~~~d~~~ll~~~~~~~~l~~~la~~~~~~--~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~~~k~~~~~~~~~~~~~~  107 (188)
                      .+..|+|+..++.+|+.++.+++.+++++.+.  ++|+|++++.||+++|..+|..|++|+++.+|...           
T Consensus        24 ~s~~yid~~~l~~~p~~~~~~~~~La~~i~~~~~~~d~Ivgi~~gGi~~A~~la~~L~~~~i~~~k~~~-----------   92 (187)
T TIGR01367        24 HSPYFLQSATLLEHPEALMELGGELAQKILDYGLKVDFIVGPAMGGVILGYEVARQLSVRSIFAEREGG-----------   92 (187)
T ss_pred             cCCeeEechhhhcCHHHHHHHHHHHHHHHHHhCCCCCEEEEEccCcHHHHHHHHHHhCCCeEEEEEeCC-----------
Confidence            34789999999999999999999999999765  78999999999999999999999999987765431           


Q ss_pred             eeccceeEEEecC-CCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChhhhhccCCCCeEEEEeccc
Q 029741          108 LEYGTDRLEMHVG-AIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQRRLDGKPLYILVEPRL  184 (188)
Q Consensus       108 ~~~~~~~~~l~~~-~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~~~~~l~~~~~~~l~~~~~  184 (188)
                            .+.+..+ ...+|++|||||||++||+|+.++++.|+++|++++++++++++.++.....|+|+++|++++.
T Consensus        93 ------~~~~~~~~~l~~G~~VLIVDDIi~TG~Tl~~a~~~l~~~Ga~vv~~~vlid~~~~~~~~~~~~~~sl~~~~~  164 (187)
T TIGR01367        93 ------GMKLRRGFAVKPGEKFVAVEDVVTTGGSLLEAIRAIEGQGGQVVGLACIIDRSQGGKPDSGVPLMSLKELEF  164 (187)
T ss_pred             ------cEEEeecccCCCCCEEEEEEeeecchHHHHHHHHHHHHcCCeEEEEEEEEECcCCCcccCCCCEEEEEEEec
Confidence                  0111111 2358999999999999999999999999999999999999999987655556999999999843

This model represents a distinct clade of orotate phosphoribosyltransferases. Members include the experimentally determined example from Thermus aquaticus and additional examples from Caulobacter crescentus, Helicobacter pylori, Mesorhizobium loti, and related species.

>PRK05500 bifunctional orotidine 5'-phosphate decarboxylase/orotate phosphoribosyltransferase protein; Validated

Probab=99.91  E-value=7.9e-24  Score=184.85  Aligned_cols=142  Identities=20%  Similarity=0.354  Sum_probs=125.9

Q ss_pred             CceEEechhhhcCHHHHHHHHHHHHHHHhcCCCcEEEEeCCCChhhHHHHHHHhCCCeEEEeecCCCCCcccchheeeec
Q 029741           31 GIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEY  110 (188)
Q Consensus        31 g~~~~d~~~ll~~~~~~~~l~~~la~~~~~~~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~~~k~~~~~~~~~~~~~~~~~  110 (188)
                      +..|+|+..++.+|..++.+++.+++.+.+.++|.|+|++.+|+++|..+|..+++|+++.||..|.++           
T Consensus       313 S~~YiD~~~lls~P~~l~~v~~~la~~l~~~~~D~I~Gia~gGiPlAt~lA~~lg~p~v~vRKe~K~~G-----------  381 (477)
T PRK05500        313 FSYYIDLRKIISNPQLFHQVLSAYAEILKNLTFDRIAGIPYGSLPTATGLALHLHHPMIFPRKEVKAHG-----------  381 (477)
T ss_pred             CCEEEEChhhhcCHHHHHHHHHHHHHHhccCCCCEEEEEccchHHHHHHHHHHhCCCEEEEecCcCccC-----------
Confidence            478999999999999999999999999987789999999999999999999999999999998865332           


Q ss_pred             cceeEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChh-hhhccC--CCCeEEEEeccccc
Q 029741          111 GTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE-GQRRLD--GKPLYILVEPRLSV  186 (188)
Q Consensus       111 ~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~-~~~~l~--~~~~~~l~~~~~~~  186 (188)
                       +..+.  .+.+.+|++|+|||||+|||+|+.++++.|+++|++++++++++++.+ ++++|+  |+|++||+++++..
T Consensus       382 -~~~~i--eG~~~~G~rVlIVDDViTTGgSi~eaie~l~~aG~~V~~v~vlVDR~~g~~~~L~~~gv~~~Sl~tl~el~  457 (477)
T PRK05500        382 -TRRLI--EGNFHPGETVVVVDDILITGKSVMEGAEKLKSAGLNVRDIVVFIDHEQGVKDKLQSHGYQAYSVLTISEIT  457 (477)
T ss_pred             -CCceE--ecCCCCcCEEEEEEeccccCHHHHHHHHHHHHCCCEEEEEEEEEECCcchHHHHHhcCCCEEEEEEHHHHH
Confidence             22221  255569999999999999999999999999999999999999999987 567775  89999999998854

>COG0461 PyrE Orotate phosphoribosyltransferase [Nucleotide transport and metabolism]

Probab=99.91  E-value=5.4e-23  Score=160.72  Aligned_cols=159  Identities=25%  Similarity=0.326  Sum_probs=127.9

Q ss_pred             hHHHHhh-cccccCCCCC----CCceEEechhhhcCHHHHHHHHHHHHHHHhcC-CCcEEEEeCCCChhhHHHHHHHhC-
Q 029741           13 RLQGISK-AIRVVPDFPI----PGIMFQDITTLLLDHKAFKDTVDIFVDRYRDM-GISVVAGIEARGFVFGPSIALAIG-   85 (188)
Q Consensus        13 ~~~~~~~-~~r~~~~~~~----~g~~~~d~~~ll~~~~~~~~l~~~la~~~~~~-~~d~Iv~v~~gG~~~a~~lA~~l~-   85 (188)
                      +.+.+.+ ..-..+.|+.    .+..|+|...+..+|+..+.++..+++.+.+. ++|+|+|++.+|+|+|..+|..|+ 
T Consensus         6 ~~~~l~~~~a~~fG~f~LsSG~~SpyY~d~~~~~~~p~~~~~i~~~~a~~~~~~~~~d~v~G~a~ggiP~A~~~a~~l~~   85 (201)
T COG0461           6 LAELLLEKGALKFGEFTLSSGRKSPYYVDLRLFLTGPELLQLIAFALAEIIKEALEFDVVAGPALGGIPLAAATALALAH   85 (201)
T ss_pred             HHHHHHHcCCeecCceeecCCCcCCeEEecccccCCHHHHHHHHHHHHHHhhccCCCcEEEeccccchHHHHHHHHHhcc
Confidence            4445554 1122355552    34899999999999999999999999999884 899999999999999999999994 


Q ss_pred             CC-eEEEeecCCCCCcccchheeeeccceeEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeC
Q 029741           86 AK-FVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGL  164 (188)
Q Consensus        86 ~p-~~~~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~  164 (188)
                      .| +++.||..+-+++.           +.++   +...+|++|+||||++|||+|+.++++.|+++|+.++++++++++
T Consensus        86 ~~~~~~~Rke~K~hG~~-----------~~ie---G~~~~G~kVvvVEDViTTG~Si~eai~~l~~~G~~V~gv~~ivDR  151 (201)
T COG0461          86 LPPMAYVRKEAKDHGTG-----------GLIE---GGEVKGEKVVVVEDVITTGGSILEAVEALREAGAEVVGVAVIVDR  151 (201)
T ss_pred             CCcEEEEeceeccCCCc-----------ceeE---ecCCCCCEEEEEEecccCCHhHHHHHHHHHHcCCeEEEEEEEEec
Confidence            22 77788776644321           2222   333499999999999999999999999999999999999999999


Q ss_pred             hh-hhhccC--CCCeEEEEecccc
Q 029741          165 PE-GQRRLD--GKPLYILVEPRLS  185 (188)
Q Consensus       165 ~~-~~~~l~--~~~~~~l~~~~~~  185 (188)
                      .+ +.+.+.  |+++++|++++|.
T Consensus       152 ~~~~~~~~~~~g~~~~sl~tl~dl  175 (201)
T COG0461         152 QSGAKEVLKEYGVKLVSLVTLSDL  175 (201)
T ss_pred             chhHHHHHHhcCCceEEEeeHHHH
Confidence            76 555565  9999999999984

>PRK06031 phosphoribosyltransferase; Provisional

Probab=99.88  E-value=1.2e-21  Score=157.35  Aligned_cols=162  Identities=21%  Similarity=0.350  Sum_probs=118.6

Q ss_pred             HHhhcccccCCCCCCCceEEechhhhcCH---HHHHHHHHHHHHHHhcCCCcEEEEeCCCChhhHHHHHHHhCCC-eEEE
Q 029741           16 GISKAIRVVPDFPIPGIMFQDITTLLLDH---KAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAK-FVPL   91 (188)
Q Consensus        16 ~~~~~~r~~~~~~~~g~~~~d~~~ll~~~---~~~~~l~~~la~~~~~~~~d~Iv~v~~gG~~~a~~lA~~l~~p-~~~~   91 (188)
                      ++..++|.+|++|      .|+..++.++   +.++.+++.|++++.+.++|+|+|++.+|+++|..+|.+||++ ++.+
T Consensus        41 ~l~~~~r~~~~~~------~~i~~ll~~~~~~~~~~~la~~La~~~~~~~~DvIVgv~~~Gi~lA~~lA~~Lg~~~~vpl  114 (233)
T PRK06031         41 QLLLPIRGLPDGD------RALASLIVNQASFEVLDALAEHLAEKARAFDPDVVAGLPTLGLTLAAAVARKLGHTRYVPL  114 (233)
T ss_pred             EeccCcEECCCCC------CchhhHhCChhHHHHHHHHHHHHHHHcccCCCcEEEEeccCCHHHHHHHHHHHCCCCceEE
Confidence            5677888888865      4788999997   5556799999999987789999999999999999999999974 3444


Q ss_pred             eecCCCCC--cc-cc-hheeeeccceeEEEecC--CCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeCh
Q 029741           92 RKPNKLPG--EV-IS-EAYVLEYGTDRLEMHVG--AIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLP  165 (188)
Q Consensus        92 ~k~~~~~~--~~-~~-~~~~~~~~~~~~~l~~~--~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~  165 (188)
                      ++.++...  .. .. .++......+.+.+...  ...+|++||||||+++||+|+.+++++|+++|++++++++++.+.
T Consensus       115 ~~~rK~~~~~~l~~~~~sitt~~~~~~~~l~~~~~~~~~GkrVLIVDDVitTG~Tl~aa~~lL~~~Ga~Vvgv~v~v~~g  194 (233)
T PRK06031        115 GTSRKFWYRDELSVPLSSITTPDQGKRLYIDPRMLPLLEGRRVALIDDVISSGASIVAGLRLLAACGIEPAGIGAAMLQS  194 (233)
T ss_pred             EEccccccccccccceeeeeccCccceEEecccccccCCCCEEEEEEeEccccHHHHHHHHHHHHcCCeEEEEEEEEEcc
Confidence            43222211  00 00 00110111223444322  235899999999999999999999999999999999999999998


Q ss_pred             h-hhhccC------CCCeEEEEecc
Q 029741          166 E-GQRRLD------GKPLYILVEPR  183 (188)
Q Consensus       166 ~-~~~~l~------~~~~~~l~~~~  183 (188)
                      + ++++|.      ..++.++.+++
T Consensus       195 ~~~~~~l~~~~~~~~~~~~~~~~~p  219 (233)
T PRK06031        195 ERWRESLAAAGPQWPARVVGVFATP  219 (233)
T ss_pred             ccHHHHHHhcCCCcccceEEEeecc
Confidence            7 666664      25677777665

>PF00156 Pribosyltran: Phosphoribosyl transferase domain; InterPro: IPR000836 The name PRT comes from phosphoribosyltransferase (PRTase) enzymes, which carry out phosphoryl transfer reactions on 5-phosphoribosyl-alpha1-pyrophosphate PRPP, an activated form of ribose-5-phosphate

Probab=99.83  E-value=5.9e-20  Score=133.71  Aligned_cols=122  Identities=27%  Similarity=0.428  Sum_probs=92.3

Q ss_pred             hhhcCHHHHHHHHHHHHHHHhcC--CCcEEEEeCCCChhhHHHHHHHhCCCeEEEeecCCCCCcccchheeeeccceeEE
Q 029741           39 TLLLDHKAFKDTVDIFVDRYRDM--GISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLE  116 (188)
Q Consensus        39 ~ll~~~~~~~~l~~~la~~~~~~--~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~  116 (188)
                      +++.+++.+..+++.+++++.+.  ++|.|+|++.+|+++|..+|.+++.|+....+.......  ............+.
T Consensus         2 ~i~~~~~~~~~~~~~la~~i~~~~~~~~~ivgi~~~G~~~a~~la~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~   79 (125)
T PF00156_consen    2 KIILSPEQIEALAERLAEQIKESGFDFDVIVGIPRGGIPLAAALARALGIPLVFVRKRKSYYPG--SDKTSREKNNQELF   79 (125)
T ss_dssp             EEEEBHHHHHHHHHHHHHHHHHHTTTSSEEEEETTTTHHHHHHHHHHHTHEEEEEEEEEEEESE--EEEEEEETEEEEEE
T ss_pred             EEEEcHHHHHHHHHHHHHHHHHhCCCCCEEEeehhccHHHHHHHHHHhCCCccceeeeeccccc--chhhhhccCceEEe
Confidence            46789999999999999999865  567899999999999999999999998775443210000  00000011111222


Q ss_pred             EecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEe
Q 029741          117 MHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVV  162 (188)
Q Consensus       117 l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~  162 (188)
                      .......+|++||||||+++||+|+.++++.|+++|++++.+++++
T Consensus        80 ~~~~~~~~gk~vliVDDvi~tG~Tl~~~~~~L~~~g~~~v~~~vl~  125 (125)
T PF00156_consen   80 IIDKEDIKGKRVLIVDDVIDTGGTLKEAIELLKEAGAKVVGVAVLV  125 (125)
T ss_dssp             EEESSSGTTSEEEEEEEEESSSHHHHHHHHHHHHTTBSEEEEEEEE
T ss_pred             ecccccccceeEEEEeeeEcccHHHHHHHHHHHhCCCcEEEEEEEC
Confidence            2234456999999999999999999999999999999999999875

Members of Phosphoribosyltransferase (PRT) are catalytic and are regulatory proteins involved in nucleotide synthesis and salvage []. This includes a range of diverse phosphoribosyl transferase enzymes including adenine phosphoribosyltransferase (2.4.2.7 from EC); hypoxanthine-guanine-xanthine phosphoribosyltransferase; hypoxanthine phosphoribosyltransferase (2.4.2.8 from EC); ribose-phosphate pyrophosphokinase (2.7.6.1 from EC); amidophosphoribosyltransferase (2.4.2.14 from EC); orotate phosphoribosyltransferase (2.4.2.10 from EC);uracil phosphoribosyltransferase (2.4.2.9 from EC); and xanthine-guanine phosphoribosyltransferase (2.4.2.22 from EC). Not all PRT proteins are enzymes. For example, in some bacteria PRT proteins regulate the expression of purine and pyrimidine synthetic genes. Members of PRT are defined by the protein fold and by a short 13-residue sequence motif, The motif consists of four hydrophobic amino acids, two acidic amino acids and seven amino acids of variable character, usually including glycine and threonine. The motif has been predicted to be a PRPP-binding site in advance of structural information [, ]. Apart of this motif, different PRT proteins have a low level of sequence identity, less than 15%. The PRT sequence motif is only found in PRTases from the nucleotide synthesis and salvage pathways. Other PRTases, from the tryptophan, histidine and nicotinamide synthetic and salvage pathways, lack the PRT sequence motif and appear to be unrelated to each other and unrelated to the PRT family.; GO: 0009116 nucleoside metabolic process; PDB: 2JBH_A 1Y0B_D 2FXV_B 1GPH_1 1AO0_D 1ORO_B 1VCH_C 2WNS_A 2PRZ_B 2PS1_A ....

>COG0856 Orotate phosphoribosyltransferase homologs [Nucleotide transport and metabolism]

Probab=99.83  E-value=1.7e-19  Score=136.15  Aligned_cols=143  Identities=20%  Similarity=0.304  Sum_probs=113.3

Q ss_pred             CCceEEechhhhcCHHHHHHHHHHHHHH-Hhc--CCCcEEEEeCCCChhhHHHHHHHhCCCeEEEe--ecCCCCCcccch
Q 029741           30 PGIMFQDITTLLLDHKAFKDTVDIFVDR-YRD--MGISVVAGIEARGFVFGPSIALAIGAKFVPLR--KPNKLPGEVISE  104 (188)
Q Consensus        30 ~g~~~~d~~~ll~~~~~~~~l~~~la~~-~~~--~~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~~~--k~~~~~~~~~~~  104 (188)
                      |-..++|++++=..+.-++.++..++.. +..  .++|+|+|++..|+|+|.++|..||..+...+  |.++..+.    
T Consensus        51 p~Di~i~W~siG~s~sRl~~Is~am~Dm~m~~~~~evDvVvGIa~sGvPlAtmvA~elg~elaiY~PrK~~~de~~----  126 (203)
T COG0856          51 PVDIKIDWRSIGKSGSRLRYISEAMADMIMEKVSFEVDVVVGIAISGVPLATMVAYELGKELAIYHPRKHRKDEGA----  126 (203)
T ss_pred             CcceEEechhhccchHHHHHHHHHHHHHHHHhccceeEEEEEEeecCccHHHHHHHHhCCceEEEecccccccccC----
Confidence            4478999999988899999999999983 332  37899999999999999999999999986543  22221110    


Q ss_pred             heeeeccceeEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChhhhhccCCCCeEEEEecc
Q 029741          105 AYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQRRLDGKPLYILVEPR  183 (188)
Q Consensus       105 ~~~~~~~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~~~~~l~~~~~~~l~~~~  183 (188)
                           .....+.-. ..-..||+++||||++|||+|+.++++.|++.|++.+.|++++++. +...++|+|+.||+.+.
T Consensus       127 -----~~~G~iS~N-Fa~V~gK~cvIVDDvittG~Ti~E~Ie~lke~g~kpv~v~VL~dK~-G~dei~gvPi~sLlri~  198 (203)
T COG0856         127 -----GKGGSISSN-FASVEGKRCVIVDDVITTGSTIKETIEQLKEEGGKPVLVVVLADKK-GVDEIEGVPVESLLRIL  198 (203)
T ss_pred             -----CcCceeecc-cccccCceEEEEecccccChhHHHHHHHHHHcCCCcEEEEEEEccC-CcccccCcchHHhheee
Confidence                 001122211 2236999999999999999999999999999999999999999987 56678899999998753

>PRK09162 hypoxanthine-guanine phosphoribosyltransferase; Provisional

Probab=99.77  E-value=2e-17  Score=128.61  Aligned_cols=139  Identities=19%  Similarity=0.163  Sum_probs=96.3

Q ss_pred             hhcCHHHHHHHHHHHHHHHhcC---CCcEEEEeCCCChhhHHHHHHHhCCCeE--EEeecCCCCCcccchheeeecccee
Q 029741           40 LLLDHKAFKDTVDIFVDRYRDM---GISVVAGIEARGFVFGPSIALAIGAKFV--PLRKPNKLPGEVISEAYVLEYGTDR  114 (188)
Q Consensus        40 ll~~~~~~~~l~~~la~~~~~~---~~d~Iv~v~~gG~~~a~~lA~~l~~p~~--~~~k~~~~~~~~~~~~~~~~~~~~~  114 (188)
                      .+.+++.+....+.++.++.+.   +.++|+++..+|+.+|..+|+.|++|+.  ++.+.+......        .....
T Consensus        15 ~~~s~~~i~~~i~~la~~i~~~~~~~~~viV~i~~gg~~~A~~La~~l~~~~~~~~l~~~~~~~~~~--------~~~~~   86 (181)
T PRK09162         15 CLVSAAEVEAAIDRMADEITADLADENPLVLCVMGGGLVFTGQLLPRLDFPLEFDYLHATRYRNETT--------GGELV   86 (181)
T ss_pred             EeecHHHHHHHHHHHHHHHHHHcCCCCeEEEEECCCcHHHHHHHHHHcCCCcccCEEEEEecCCCcc--------CCcee
Confidence            3456666777777777666542   4579999999999999999999999863  343333211100        00111


Q ss_pred             EEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChhhhhccCCCCeEEEEeccccc
Q 029741          115 LEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQRRLDGKPLYILVEPRLSV  186 (188)
Q Consensus       115 ~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~~~~~l~~~~~~~l~~~~~~~  186 (188)
                      +........+||+|||||||+|||+|+.++++.|+++|++.+.+++++.++..+....-.|=+.-.++++|+
T Consensus        87 ~~~~~~~~v~gk~VLIVDDIidTG~Tl~~~~~~Lk~~Ga~~V~~avL~~k~~~~~~~~~~pD~~g~~~~~~~  158 (181)
T PRK09162         87 WKVKPRESLKGRTVLVVDDILDEGHTLAAIRDRCLEMGAAEVYSAVLVDKTHDRKAKPLKADFVGLEVPDRY  158 (181)
T ss_pred             EecCCCCCCCCCEEEEEccccCcHHHHHHHHHHHHhCCCCEEEEEEEEEcCcccccCCCCCcEEEEEcCCce
Confidence            222222346899999999999999999999999999999999999999997644312222445555666654

>TIGR01203 HGPRTase hypoxanthine phosphoribosyltransferase

Probab=99.73  E-value=3.2e-16  Score=120.28  Aligned_cols=136  Identities=16%  Similarity=0.179  Sum_probs=93.5

Q ss_pred             hcCHHHHHHHHHHHHHHHhcC---CCcEEEEeCCCChhhHHHHHHHhCCCeE--EEeecCCCCCcccchheeeeccceeE
Q 029741           41 LLDHKAFKDTVDIFVDRYRDM---GISVVAGIEARGFVFGPSIALAIGAKFV--PLRKPNKLPGEVISEAYVLEYGTDRL  115 (188)
Q Consensus        41 l~~~~~~~~l~~~la~~~~~~---~~d~Iv~v~~gG~~~a~~lA~~l~~p~~--~~~k~~~~~~~~~~~~~~~~~~~~~~  115 (188)
                      +.+++.++..++.|+.++.+.   ++++|++|..||+.+|..+++.|++|..  ++.-....+..      + ..+...+
T Consensus         2 lis~~~i~~~i~~lA~~I~~~~~~~~~vvv~i~~GG~~~a~~l~~~L~~~~~v~~i~~~~Y~~~~------~-~~~~~~~   74 (166)
T TIGR01203         2 LIPEEQIKARIAELAKQITEDYAGKPLVLLCVLKGSFPFFADLIRYIAVPVQVDFMAVSSYGNGM------Q-SSGDVKI   74 (166)
T ss_pred             ccCHHHHHHHHHHHHHHHHHHcCCCCeEEEEEccCCHHHHHHHHHhcCCCceeeEEEEeeccCCC------c-ccCceEE
Confidence            356677777777777777542   4679999999999999999999998753  23211110000      0 0111111


Q ss_pred             EEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChhhhhccCCCCeEEEEeccc
Q 029741          116 EMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQRRLDGKPLYILVEPRL  184 (188)
Q Consensus       116 ~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~~~~~l~~~~~~~l~~~~~  184 (188)
                      ........+||+|||||||++||+|+.++++.|++.|++.+.+++++.++.++ +..-.|=+.-.++++
T Consensus        75 ~~~~~~~~~gk~vlivDDii~TG~Tl~~~~~~l~~~g~~~i~~~~l~~k~~~~-~~~~~pDy~g~~v~d  142 (166)
T TIGR01203        75 LKDLDLSIKGKDVLIVEDIVDTGLTLQYLLDLLKARKPKSLKIVTLLDKPSRR-KVDVKVDFVGFEIPD  142 (166)
T ss_pred             ecCCCCCCCCCEEEEEeeeeCcHHHHHHHHHHHHHCCCCEEEEEEEEecCccC-cCCCCCCEEEEEcCC
Confidence            11122345899999999999999999999999999999999999999998643 222123355556654

Sequence differences as small as a single residue can affect whether members of this family act on hypoxanthine and guanine or hypoxanthine only. The designation of this model as equivalog reflects hypoxanthine specificity and does not reflect whether or not guanine can replace hypoxanthine.

>PLN02238 hypoxanthine phosphoribosyltransferase

Probab=99.71  E-value=6.9e-16  Score=120.75  Aligned_cols=141  Identities=22%  Similarity=0.277  Sum_probs=99.5

Q ss_pred             chhhhcCHHHHHHHHHHHHHHHhcC---CCcEEEEeCCCChhhHHHHHHHhCC---CeE--EEeecCCCCCcccchheee
Q 029741           37 ITTLLLDHKAFKDTVDIFVDRYRDM---GISVVAGIEARGFVFGPSIALAIGA---KFV--PLRKPNKLPGEVISEAYVL  108 (188)
Q Consensus        37 ~~~ll~~~~~~~~l~~~la~~~~~~---~~d~Iv~v~~gG~~~a~~lA~~l~~---p~~--~~~k~~~~~~~~~~~~~~~  108 (188)
                      +..++.+++.++..++.++.++.+.   +.++|+|+..||+++|..+++.|+.   |+.  +++..+...+..       
T Consensus         7 ~~~~lis~~~I~~~i~~lA~~I~~~~~~~~~vivgi~~Gg~~fa~~L~~~L~~~~~~~~i~fi~~~sy~~~~~-------   79 (189)
T PLN02238          7 IEKVLWTAEDISARVAELAAQIASDYAGKSPVVLGVATGAFMFLADLVRAIQPLPRGLTVDFIRASSYGGGTE-------   79 (189)
T ss_pred             ccEEEcCHHHHHHHHHHHHHHHHHHcCCCCcEEEEEccCCHHHHHHHHHHhCccCCCeEEEEEEeeecCCCcc-------
Confidence            3455677777777777787777542   4589999999999999999999998   653  344332211110       


Q ss_pred             eccceeEEE-ecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChhhhh-cc---CCCCeEEEEecc
Q 029741          109 EYGTDRLEM-HVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQR-RL---DGKPLYILVEPR  183 (188)
Q Consensus       109 ~~~~~~~~l-~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~~~~-~l---~~~~~~~l~~~~  183 (188)
                      ..+...+.. ......+|++|||||||++||.|+.++++.|++.|++.+.++++++++..+. .+   .+.+=+.-++++
T Consensus        80 ~~g~~~i~~~~~~~~v~gk~VliVDDIidTG~Tl~~~~~~l~~~g~~~v~~avL~dK~~~r~~~~~~~~~~~d~~G~~ip  159 (189)
T PLN02238         80 SSGVAKVSGADLKIDVKGKHVLLVEDIVDTGNTLSALVAHLEAKGAASVSVCALLDKRARRKVKYELVGDGKEYVGFECP  159 (189)
T ss_pred             ccCceeEecCCCCCCCCCCEEEEEecccchHHHHHHHHHHHHhCCCCEEEEEEEEECCccccCCccCCCCCceEEEEecC
Confidence            011112221 1122369999999999999999999999999999999999999999986332 12   144566666666


Q ss_pred             c
Q 029741          184 L  184 (188)
Q Consensus       184 ~  184 (188)
                      +
T Consensus       160 d  160 (189)
T PLN02238        160 D  160 (189)
T ss_pred             C
Confidence            6

>PRK15423 hypoxanthine phosphoribosyltransferase; Provisional

Probab=99.68  E-value=9.7e-16  Score=118.76  Aligned_cols=123  Identities=12%  Similarity=0.212  Sum_probs=88.7

Q ss_pred             hhhcCHHHHHHHHHHHHHHHhcC-----CCcEEEEeCCCChhhHHHHHHHhCCCeE--EEeecCCCCCcccchheeeecc
Q 029741           39 TLLLDHKAFKDTVDIFVDRYRDM-----GISVVAGIEARGFVFGPSIALAIGAKFV--PLRKPNKLPGEVISEAYVLEYG  111 (188)
Q Consensus        39 ~ll~~~~~~~~l~~~la~~~~~~-----~~d~Iv~v~~gG~~~a~~lA~~l~~p~~--~~~k~~~~~~~~~~~~~~~~~~  111 (188)
                      .++.+.+.++..++.++.++.+.     ...+++|+..||+.+|..+++.|+.|..  ++...+.-.+..       ..+
T Consensus         6 ~~l~~~~~i~~~i~~lA~~I~~~~~~~~~~~vvvgI~~Gg~~fa~~L~~~L~~~~~v~~l~~ssY~~~~~-------~~~   78 (178)
T PRK15423          6 EVMIPEAEIKARIAELGRQITERYKDSGSDMVLVGLLRGSFMFMADLCREVQVSHEVDFMTASSYGSGMS-------TTR   78 (178)
T ss_pred             EEecCHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCChHHHHHHHHHhCCCcceeEEEEEEecCCCc-------ccC
Confidence            34567777776666666666431     2469999999999999999999999843  444433211110       011


Q ss_pred             ceeEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChhhh
Q 029741          112 TDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQ  168 (188)
Q Consensus       112 ~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~~~  168 (188)
                      ...+........+||+|||||||++||.||.++.+.+++.|++.+.++++++++.++
T Consensus        79 ~v~i~~~~~~~v~gk~VLlVDDIiDTG~TL~~l~~~l~~~~~~~v~~avL~~K~~~r  135 (178)
T PRK15423         79 DVKILKDLDEDIRGKDVLIVEDIIDSGNTLSKVREILSLREPKSLAICTLLDKPSRR  135 (178)
T ss_pred             ceEEecCCCCCCCCCEEEEEeeecCchHHHHHHHHHHHhCCCCEEEEEEEEECCCCC
Confidence            112221122346999999999999999999999999999999999999999998643

>PRK09177 xanthine-guanine phosphoribosyltransferase; Validated

Probab=99.68  E-value=1e-15  Score=116.35  Aligned_cols=115  Identities=23%  Similarity=0.277  Sum_probs=85.9

Q ss_pred             hcCHHHHHHHHHHHHHHHhcC-CCcEEEEeCCCChhhHHHHHHHhCCCeEEEeecCCCCCcccchheeeeccceeEEEec
Q 029741           41 LLDHKAFKDTVDIFVDRYRDM-GISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHV  119 (188)
Q Consensus        41 l~~~~~~~~l~~~la~~~~~~-~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~l~~  119 (188)
                      +.+++.+...++.+++++.+. ++|+|+|+++||+.+|..++++|++|++...+..         +|..+ +++.+.+..
T Consensus         9 ~is~~~i~~~i~~la~~I~~~~~~d~vvgv~~GG~~fa~~L~~~L~~~~v~~i~~s---------sY~~~-~~~~~~~~~   78 (156)
T PRK09177          9 PVSWDQLHRDARALAWRLLPAGQWKGIIAVTRGGLVPAAILARELGIRLVDTVCIS---------SYDHD-NQGELKVLK   78 (156)
T ss_pred             EcCHHHHHHHHHHHHHHHHhhCCCCEEEEEecCCeehHHHHHHHcCCCceeEEEEE---------EECCC-cCCcEEEec
Confidence            468888899999999999755 4899999999999999999999999964221110         11111 112233322


Q ss_pred             CCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChhhhhc
Q 029741          120 GAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQRR  170 (188)
Q Consensus       120 ~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~~~~~  170 (188)
                      +...+|++||||||+++||.|+.++.+.+.+     +.+++++.++.++..
T Consensus        79 ~~~~~gk~VLIVDDIiDTG~Tl~~v~~~l~~-----v~~a~l~~K~~~~~~  124 (156)
T PRK09177         79 RAEGDGEGFLVVDDLVDTGGTARAVREMYPK-----AHFATVYAKPAGRPL  124 (156)
T ss_pred             CCCcCcCEEEEEeeeeCCHHHHHHHHHHHhh-----CCEEEEEECcCCCCC
Confidence            3346999999999999999999999999974     578889998764433

>PRK07199 phosphoribosylpyrophosphate synthetase; Provisional

Probab=99.68  E-value=1.1e-15  Score=127.50  Aligned_cols=111  Identities=23%  Similarity=0.273  Sum_probs=87.9

Q ss_pred             CCcEEEEeCCCChhhHHHHHHHhCCCeEEEeecCCCCCcccchheeeeccceeEEEecCCCCCCCEEEEEcCcccchHHH
Q 029741           62 GISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTL  141 (188)
Q Consensus        62 ~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl  141 (188)
                      +.++|++|+.||..+|..+|..+++|+.+++|.+....            +..+....+...+|++|+|||||++||+|+
T Consensus       160 ~~~vVVsPd~g~~~~a~~la~~l~~~~~~~~K~R~~~~------------~~~~~~~~~~~v~Gr~vIIVDDIidTG~Tl  227 (301)
T PRK07199        160 PRPLLIGPDEESEQWVAAVAERAGAPHAVLRKTRHGDR------------DVEISLPDAAPWAGRTPVLVDDIVSTGRTL  227 (301)
T ss_pred             CCcEEEEeCCChHHHHHHHHHHhCCCEEEEEEEecCCC------------eEEEEeccCcccCCCEEEEEecccCcHHHH
Confidence            34689999999999999999999999998887653211            111111112336999999999999999999


Q ss_pred             HHHHHHHHHcCCeEEEEEEEeeChh--hhhccCCCCeEEEEeccc
Q 029741          142 SAAVRLLERMGAEVVECACVVGLPE--GQRRLDGKPLYILVEPRL  184 (188)
Q Consensus       142 ~~~~~~L~~~Ga~~v~v~~l~~~~~--~~~~l~~~~~~~l~~~~~  184 (188)
                      .++++.|+++||+++.++++|....  +.+++....+..++..+.
T Consensus       228 ~~aa~~Lk~~GA~~V~~~~tHgvfs~~a~~~l~~~~i~~iv~Tdt  272 (301)
T PRK07199        228 IEAARQLRAAGAASPDCVVVHALFAGDAYSALAAAGIARVVSTDT  272 (301)
T ss_pred             HHHHHHHHHCCCcEEEEEEEeeeCChHHHHHHHhCCCCEEEEeCC
Confidence            9999999999999999999998654  666776556777777665

>PRK00934 ribose-phosphate pyrophosphokinase; Provisional

Probab=99.65  E-value=2.7e-15  Score=124.31  Aligned_cols=110  Identities=22%  Similarity=0.321  Sum_probs=86.2

Q ss_pred             CCcEEEEeCCCChhhHHHHHHHhCCCeEEEeecCCCCCcccchheeeeccceeEEEecCCCCCCCEEEEEcCcccchHHH
Q 029741           62 GISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTL  141 (188)
Q Consensus        62 ~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl  141 (188)
                      +.++|++++.||+.+|..+|+.+++|+.+++|.+.....            ..+. ......+|++|+||||+++||+|+
T Consensus       154 ~~~vvv~pd~Ga~~~a~~lA~~l~~~~~~i~k~r~~~~~------------~~~~-~~~~~v~Gk~VlIVDDIi~TG~Tl  220 (285)
T PRK00934        154 DDPLVLAPDKGALELAKEAAEILGCEYDYLEKTRISPTE------------VEIA-PKNLDVKGKDVLIVDDIISTGGTM  220 (285)
T ss_pred             CCCEEEEeCCchHHHHHHHHHHhCCCEEEEEEEecCCCe------------EEEe-ccccccCCCEEEEEcCccccHHHH
Confidence            345899999999999999999999999888776532111            0111 011235899999999999999999


Q ss_pred             HHHHHHHHHcCCeEEEEEEEeeChh--hhhccCCCCeEEEEeccc
Q 029741          142 SAAVRLLERMGAEVVECACVVGLPE--GQRRLDGKPLYILVEPRL  184 (188)
Q Consensus       142 ~~~~~~L~~~Ga~~v~v~~l~~~~~--~~~~l~~~~~~~l~~~~~  184 (188)
                      ..+++.|+++||+++.++++|....  +.+++....+..++..+.
T Consensus       221 ~~aa~~Lk~~GA~~V~~~~~H~i~~~~a~~~l~~~~i~~i~~tnt  265 (285)
T PRK00934        221 ATAIKILKEQGAKKVYVACVHPVLVGDAILKLYNAGVDEIIVTDT  265 (285)
T ss_pred             HHHHHHHHHCCCCEEEEEEEeeccCcHHHHHHHhCCCCEEEEcCC
Confidence            9999999999999999999998543  666776556777776665

>COG0462 PrsA Phosphoribosylpyrophosphate synthetase [Nucleotide transport and metabolism / Amino acid transport and metabolism]

Probab=99.65  E-value=2.6e-15  Score=124.26  Aligned_cols=130  Identities=22%  Similarity=0.336  Sum_probs=95.0

Q ss_pred             chhhhcCHHHHHHHHHHHHHHHhcCCCcEEEEeCCCChhhHHHHHHHhCCCeEEEeecCC-CCCcccchheeeeccceeE
Q 029741           37 ITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNK-LPGEVISEAYVLEYGTDRL  115 (188)
Q Consensus        37 ~~~ll~~~~~~~~l~~~la~~~~~~~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~~~k~~~-~~~~~~~~~~~~~~~~~~~  115 (188)
                      .+++...|    .+++.+.+.. ..+..+||+|+.||...|..+|..|+.|+.++.|+|. .+..            .+.
T Consensus       143 vdnl~a~p----~l~~~~~~~~-~~~d~vVVSPD~Ggv~RAr~~A~~L~~~~a~i~K~R~~~~~~------------v~~  205 (314)
T COG0462         143 VDNLYAAP----LLAEYIREKY-DLDDPVVVSPDKGGVKRARALADRLGAPLAIIDKRRDSSPNV------------VEV  205 (314)
T ss_pred             cccccchH----HHHHHHHHhc-CCCCcEEECCCccHHHHHHHHHHHhCCCEEEEEEeecCCCCe------------EEE
Confidence            34444555    3444444443 2222599999999999999999999999999888773 2111            011


Q ss_pred             EEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChh--hhhccCCCCeEEEEeccc
Q 029741          116 EMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLDGKPLYILVEPRL  184 (188)
Q Consensus       116 ~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~--~~~~l~~~~~~~l~~~~~  184 (188)
                      ....+ ..+||+++||||+++||+|+..+++.|++.||++|++++.|....  ..+++++..+..++..+.
T Consensus       206 ~~~~g-dV~gk~~iiVDDiIdTgGTi~~Aa~~Lk~~GAk~V~a~~tH~vfs~~a~~~l~~~~i~~vivTnT  275 (314)
T COG0462         206 MNLIG-DVEGKDVVIVDDIIDTGGTIAKAAKALKERGAKKVYAAATHGVFSGAALERLEASAIDEVIVTDT  275 (314)
T ss_pred             eeccc-ccCCCEEEEEeccccccHHHHHHHHHHHHCCCCeEEEEEEchhhChHHHHHHhcCCCCEEEEeCC
Confidence            11113 369999999999999999999999999999999999999998755  556666556777766655

>PRK02269 ribose-phosphate pyrophosphokinase; Provisional

Probab=99.64  E-value=4.5e-15  Score=124.74  Aligned_cols=111  Identities=19%  Similarity=0.282  Sum_probs=87.0

Q ss_pred             CcEEEEeCCCChhhHHHHHHHhCCCeEEEeecCCCCCcccchheeeeccceeEEEecCCCCCCCEEEEEcCcccchHHHH
Q 029741           63 ISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLS  142 (188)
Q Consensus        63 ~d~Iv~v~~gG~~~a~~lA~~l~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~  142 (188)
                      ..+||+|+.||..+|..+|..||+|+.+++|++.....         .....+.+ .+. .+||+|+|||||+|||+|+.
T Consensus       166 ~~vvVsPd~G~~~~A~~lA~~lg~~~~~~~k~r~~~~~---------~~~~~~~~-~gd-v~Gr~viIVDDIidTG~Tl~  234 (320)
T PRK02269        166 DVVVVSPDHGGVTRARKLAQFLKTPIAIIDKRRSVDKM---------NTSEVMNI-IGN-VKGKKCILIDDMIDTAGTIC  234 (320)
T ss_pred             CcEEEEECccHHHHHHHHHHHhCCCEEEEEecccCCCC---------ceeEEEEe-ccc-cCCCEEEEEeeecCcHHHHH
Confidence            35899999999999999999999999887765431110         00111122 133 58999999999999999999


Q ss_pred             HHHHHHHHcCCeEEEEEEEeeChh--hhhccCCCCeEEEEeccc
Q 029741          143 AAVRLLERMGAEVVECACVVGLPE--GQRRLDGKPLYILVEPRL  184 (188)
Q Consensus       143 ~~~~~L~~~Ga~~v~v~~l~~~~~--~~~~l~~~~~~~l~~~~~  184 (188)
                      ++++.|++.||++|.+++.|....  +.+++....+..++..+.
T Consensus       235 ~aa~~Lk~~GA~~V~~~~tHglf~~~a~~~l~~~~i~~iv~Tdt  278 (320)
T PRK02269        235 HAADALAEAGATEVYASCTHPVLSGPALDNIQKSAIEKLVVLDT  278 (320)
T ss_pred             HHHHHHHHCCCCEEEEEEECcccCchHHHHHHhCCCCEEEEeCC
Confidence            999999999999999999998754  567776667888877765

>PRK08525 amidophosphoribosyltransferase; Provisional

Probab=99.63  E-value=4.3e-15  Score=129.90  Aligned_cols=137  Identities=18%  Similarity=0.186  Sum_probs=95.5

Q ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEeCCCChhhHHHHHHHhCCCeE--EEeecCCCCCcccchheeeeccceeEEEec-CC
Q 029741           45 KAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFV--PLRKPNKLPGEVISEAYVLEYGTDRLEMHV-GA  121 (188)
Q Consensus        45 ~~~~~l~~~la~~~~~~~~d~Iv~v~~gG~~~a~~lA~~l~~p~~--~~~k~~~~~~~~~~~~~~~~~~~~~~~l~~-~~  121 (188)
                      +....+++.|++.+.. +.|+|+++|.+|+++|..+|+.+|+|+.  .++|+. ..........+.+.....+.+.. ..
T Consensus       259 ~~R~~~G~~La~~~~~-~~d~Vv~vPd~g~~~A~~~A~~lgip~~~~l~rk~~-~~r~~i~~~qr~rn~~~~~~~~~~~~  336 (445)
T PRK08525        259 EVRKKMGEELAKKFPI-KADFVVPVPDSGVPAAIGYAQESGIPFEMAIVRNHY-VGRTFIEPTQEMRNLKVKLKLNPMSK  336 (445)
T ss_pred             HHHHHHHHHHHHHhcc-cCCeEEECCchHHHHHHHHHHHhCCCccceEEEeec-cccccCCHHHHHHhhheeEEeccccc
Confidence            6677899999988764 6789999999999999999999999983  444432 21111111111111112333322 23


Q ss_pred             CCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChh--hhhccCCCCeEEEEecc
Q 029741          122 IEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLDGKPLYILVEPR  183 (188)
Q Consensus       122 ~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~--~~~~l~~~~~~~l~~~~  183 (188)
                      ..+||+|+||||++|||+|+.++++.|+++||+.|.+++.|....  ....++..++..|+..+
T Consensus       337 ~v~gK~VlLVDDvitTG~Tl~~a~~~Lr~aGA~~V~v~~~hp~~~~~~~~~i~~~~~~~li~~~  400 (445)
T PRK08525        337 VLEGKRIVVIDDSIVRGTTSKKIVSLLRAAGAKEIHLRIACPEIKFPCYYGIDTPTFEELISAN  400 (445)
T ss_pred             ccCCCeEEEEecccCcHHHHHHHHHHHHhcCCCEEEEEEECCCcCCchhhhCcCCChhhEEEcC
Confidence            368999999999999999999999999999999999999998533  44444444455555433

>PRK05205 bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase; Provisional

Probab=99.62  E-value=1.7e-14  Score=111.62  Aligned_cols=120  Identities=22%  Similarity=0.279  Sum_probs=85.7

Q ss_pred             hhhcCHHHHHHHHHHHHHHHhcC----CCcEEEEeCCCChhhHHHHHHHh----CCC--eEEEeecCCCCCcccchheee
Q 029741           39 TLLLDHKAFKDTVDIFVDRYRDM----GISVVAGIEARGFVFGPSIALAI----GAK--FVPLRKPNKLPGEVISEAYVL  108 (188)
Q Consensus        39 ~ll~~~~~~~~l~~~la~~~~~~----~~d~Iv~v~~gG~~~a~~lA~~l----~~p--~~~~~k~~~~~~~~~~~~~~~  108 (188)
                      ..+.+++.+...++.++.++...    ++++|+|+..||+++|..++..|    +.|  +.++.....-...      + 
T Consensus         4 ~~l~s~~~i~~~i~~la~~i~~~~~~~~~~viv~il~gG~~~a~~La~~L~~~~~~~~~~~~l~~~~y~~~~------~-   76 (176)
T PRK05205          4 KEILDAEALRRALTRIAHEIIERNKGLDNLVLVGIKTRGVWLAERLAERLEQLEGVDVPVGELDITLYRDDL------T-   76 (176)
T ss_pred             cccCCHHHHHHHHHHHHHHHHHHcCCCCCeEEEEEccCCHHHHHHHHHHHHHHcCCCCccceEEEEEeecCc------c-
Confidence            45668888888888888888652    46799999999999999999999    544  3333221100000      0 


Q ss_pred             eccc-eeEE-EecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcC-CeEEEEEEEeeCh
Q 029741          109 EYGT-DRLE-MHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMG-AEVVECACVVGLP  165 (188)
Q Consensus       109 ~~~~-~~~~-l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~G-a~~v~v~~l~~~~  165 (188)
                      ..+. .... ........|++|||||||++||+|+..+++.|++.| ++.+.++++++++
T Consensus        77 ~~~~~~~~~~~~l~~~v~gr~VLIVDDIidTG~Tl~~~~~~L~~~G~~~~v~~avL~~K~  136 (176)
T PRK05205         77 KKGLHPQVKPTDIPFDIEGKRVILVDDVLYTGRTIRAALDALFDYGRPARVQLAVLVDRG  136 (176)
T ss_pred             ccCcccccccccCCCCCCCCEEEEEecccCcHHHHHHHHHHHHhcCCCcEEEEEEEEECC
Confidence            0000 0110 011223689999999999999999999999999999 7889999999984

>PTZ00271 hypoxanthine-guanine phosphoribosyltransferase; Provisional

Probab=99.62  E-value=3.1e-14  Score=112.90  Aligned_cols=125  Identities=13%  Similarity=0.169  Sum_probs=88.4

Q ss_pred             chhhhcCHHHHHHHHHHHHHHHhcC---------CCcEEEEeCCCChhhHHHHHHHhC---CCe--EEEeecCCCCCccc
Q 029741           37 ITTLLLDHKAFKDTVDIFVDRYRDM---------GISVVAGIEARGFVFGPSIALAIG---AKF--VPLRKPNKLPGEVI  102 (188)
Q Consensus        37 ~~~ll~~~~~~~~l~~~la~~~~~~---------~~d~Iv~v~~gG~~~a~~lA~~l~---~p~--~~~~k~~~~~~~~~  102 (188)
                      ....+.+++.+...++.||.++.+.         ++++|+|+..||+.+|..|+++|+   .|+  .++.-...-.+.. 
T Consensus        23 ~~~~lis~e~I~~~i~~LA~~I~~~~~~~~~~~~~~~vivgVlkGg~~fa~dL~r~L~~~~~~~~vdfi~vssY~~~~~-  101 (211)
T PTZ00271         23 SAHTLVTQEQVWAATAKCAKKIAEDYRSFKLTTENPLYLLCVLKGSFIFTADLARFLADEGVPVKVEFICASSYGTGVE-  101 (211)
T ss_pred             cccEecCHHHHHHHHHHHHHHHHHHhhhccccCCCCeEEEEEcCCCHHHHHHHHHHhcccCCCeeEEEEEEEecCCCCc-
Confidence            3345678887777777777766532         256899999999999999999996   663  2232221100100 


Q ss_pred             chheeeeccceeEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChhhh
Q 029741          103 SEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQ  168 (188)
Q Consensus       103 ~~~~~~~~~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~~~  168 (188)
                            +.+.-.+........+||+|||||||++||.||.++++.|++.|++.+.++++++++..+
T Consensus       102 ------s~g~~~i~~~~~~~i~gk~VLIVDDIvDTG~TL~~v~~~l~~~~p~svk~avL~dK~~~r  161 (211)
T PTZ00271        102 ------TSGQVRMLLDVRDSVENRHILIVEDIVDSAITLQYLMRFMLAKKPASLKTVVLLDKPSGR  161 (211)
T ss_pred             ------ccCceEEecCCCCCCCCCEEEEEecccCCHHHHHHHHHHHHhcCCCEEEEEEEEEcccCC
Confidence                  011112221222346899999999999999999999999999999999999999997643

>PRK04923 ribose-phosphate pyrophosphokinase; Provisional

Probab=99.61  E-value=1.4e-14  Score=121.58  Aligned_cols=110  Identities=23%  Similarity=0.270  Sum_probs=87.4

Q ss_pred             CCcEEEEeCCCChhhHHHHHHHhC-CCeEEEeecCCCCCcccchheeeeccceeEEEecCCCCCCCEEEEEcCcccchHH
Q 029741           62 GISVVAGIEARGFVFGPSIALAIG-AKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGT  140 (188)
Q Consensus        62 ~~d~Iv~v~~gG~~~a~~lA~~l~-~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~T  140 (188)
                      +..+|++|+.||..+|..+|..|+ +|+.++.|.+.....           ...+.+ .+ ..+||+|+|||||++||+|
T Consensus       166 ~~~vVVsPD~Ga~~rA~~lA~~L~~~~~~~~~K~R~~~~~-----------~~~~~~-~g-dv~Gr~viIVDDIidTG~T  232 (319)
T PRK04923        166 DNLIVVSPDVGGVVRARAVAKRLDDADLAIIDKRRPRANV-----------ATVMNI-IG-DVQGKTCVLVDDLVDTAGT  232 (319)
T ss_pred             CCCEEEEECCchHHHHHHHHHHcCCCCEEEeccccCCCCc-----------eEEEec-cc-CCCCCEEEEEecccCchHH
Confidence            344899999999999999999998 899988776632111           011111 13 3599999999999999999


Q ss_pred             HHHHHHHHHHcCCeEEEEEEEeeChh--hhhccCCCCeEEEEeccc
Q 029741          141 LSAAVRLLERMGAEVVECACVVGLPE--GQRRLDGKPLYILVEPRL  184 (188)
Q Consensus       141 l~~~~~~L~~~Ga~~v~v~~l~~~~~--~~~~l~~~~~~~l~~~~~  184 (188)
                      +.++++.|+++||+++.+++.|....  +.+++...++..+++.+.
T Consensus       233 l~~aa~~Lk~~GA~~V~~~~THgvfs~~a~~~l~~s~i~~iv~Tdt  278 (319)
T PRK04923        233 LCAAAAALKQRGALKVVAYITHPVLSGPAVDNINNSQLDELVVTDT  278 (319)
T ss_pred             HHHHHHHHHHCCCCEEEEEEECcccCchHHHHHhhCCCCEEEEeCC
Confidence            99999999999999999999998755  556776667887777665

>COG1040 ComFC Predicted amidophosphoribosyltransferases [General function prediction only]

Probab=99.61  E-value=2e-15  Score=121.09  Aligned_cols=124  Identities=20%  Similarity=0.218  Sum_probs=84.0

Q ss_pred             hcCHHHHHHHHHHHHHHHh--cCCCcEEEEeC-------CCChhhHHHHHHHhC----CCeEEEeecCCCCCcccchhee
Q 029741           41 LLDHKAFKDTVDIFVDRYR--DMGISVVAGIE-------ARGFVFGPSIALAIG----AKFVPLRKPNKLPGEVISEAYV  107 (188)
Q Consensus        41 l~~~~~~~~l~~~la~~~~--~~~~d~Iv~v~-------~gG~~~a~~lA~~l~----~p~~~~~k~~~~~~~~~~~~~~  107 (188)
                      ..+....+.+++.++..+.  ...+|.||++|       .+|++++..+|+.++    +|+...+++............+
T Consensus        88 ~~~~~l~~~la~~l~~~~~~~~~~~~~iVpVPls~~r~~~RGFNQ~~~la~~l~~~~~~~~~~~r~k~~~~q~~l~~~~r  167 (225)
T COG1040          88 QGDLDLAKLLARLLAKALDDFLEKPDLIVPVPLSPSRLLERGFNQSELLARALARRLGKPIALRRVKDTSPQQGLKALER  167 (225)
T ss_pred             CCchhHHHHHHHHHHHHHhhccccCCeEEEecCCHHHHHHcCCCHHHHHHHHHHHHhCchHHHHHHhccccccccchHHH
Confidence            3467888888999988887  34789999998       589999888888875    4442222121111110100011


Q ss_pred             eeccceeEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeCh
Q 029741          108 LEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLP  165 (188)
Q Consensus       108 ~~~~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~  165 (188)
                      ...-.+.+.+..+. ...++|+|||||+|||+|+.++.+.|++.|+++|.+++++...
T Consensus       168 r~nl~~aF~~~~~~-~~~~~vlLvDDV~TTGaTl~~~~~~L~~~Ga~~v~~~~lar~~  224 (225)
T COG1040         168 RRNLKGAFRLKKGI-EEPKNVLLVDDVYTTGATLKEAAKLLREAGAKRVFVLTLARAP  224 (225)
T ss_pred             HHhccCCeecCCCC-CCCCeEEEEecccccHHHHHHHHHHHHHcCCceEEEEEEEecC
Confidence            11112345543322 2239999999999999999999999999999999999998753

>COG0634 Hpt Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism]

Probab=99.61  E-value=2.3e-14  Score=108.97  Aligned_cols=123  Identities=20%  Similarity=0.302  Sum_probs=92.0

Q ss_pred             chhhhcCHHHHHHHHHHHHHHHhcC---CCcEEEEeCCCChhhHHHHHHHhCCCeEE--EeecCCCCCcccchheeeecc
Q 029741           37 ITTLLLDHKAFKDTVDIFVDRYRDM---GISVVAGIEARGFVFGPSIALAIGAKFVP--LRKPNKLPGEVISEAYVLEYG  111 (188)
Q Consensus        37 ~~~ll~~~~~~~~l~~~la~~~~~~---~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~--~~k~~~~~~~~~~~~~~~~~~  111 (188)
                      ...++.+.+.++.-++++++++.+.   +..+++|+..|+++|+..+..+++.|..+  +.-...-.++         .+
T Consensus         7 ~~evLisee~I~~ri~ela~~I~~~y~g~~~~vv~iLkGs~~F~~dL~r~i~~~~e~dFm~vSSYg~~t---------~s   77 (178)
T COG0634           7 IKEVLISEEQIKARIKELAAQITEDYGGKDPLVVGVLKGSFPFMADLIRAIDFPLEVDFMHVSSYGGGT---------SS   77 (178)
T ss_pred             cceEeeCHHHHHHHHHHHHHHHHHhhCCCceEEEEEcccchhhHHHHHHhcCCCceeEEEEEeccCCCc---------cc
Confidence            4556778888887777777777643   45589999999999999999999987632  3222111111         11


Q ss_pred             ceeEEEec--CCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChhhh
Q 029741          112 TDRLEMHV--GAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQ  168 (188)
Q Consensus       112 ~~~~~l~~--~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~~~  168 (188)
                      +..+.+..  +...+||+|||||||++||.||..+.+.|+.+||+.+.++++.+++..+
T Consensus        78 sg~v~i~kDld~di~grdVLiVeDIiDsG~TLs~i~~~l~~r~a~sv~i~tLldK~~~r  136 (178)
T COG0634          78 SGEVKILKDLDEDIKGRDVLIVEDIIDSGLTLSKVRDLLKERGAKSVRIATLLDKPERR  136 (178)
T ss_pred             CCceEEecccccCCCCCeEEEEecccccChhHHHHHHHHHhCCCCeEEEEEEeeCcccc
Confidence            22222222  3446999999999999999999999999999999999999999999744

>TIGR00201 comF comF family protein

Probab=99.59  E-value=7.6e-15  Score=114.93  Aligned_cols=120  Identities=17%  Similarity=0.213  Sum_probs=78.0

Q ss_pred             cCHHHHHHHHHHHHHHHhcC---CCcEEEEeC-------CCChhhHHHHHHHhCCC---eE-EEeecCCCCCcccchhee
Q 029741           42 LDHKAFKDTVDIFVDRYRDM---GISVVAGIE-------ARGFVFGPSIALAIGAK---FV-PLRKPNKLPGEVISEAYV  107 (188)
Q Consensus        42 ~~~~~~~~l~~~la~~~~~~---~~d~Iv~v~-------~gG~~~a~~lA~~l~~p---~~-~~~k~~~~~~~~~~~~~~  107 (188)
                      .+..+...+++.++..+...   .+|.|+++|       .+|++++..+|..+...   +. .+.+.+.......+...+
T Consensus        56 ~~~~l~~~l~~~l~~~~~~~~~~~~~~ivpVP~~~~r~~~RGfnq~~~la~~l~~~~~~~~~~l~r~~~~~Q~~l~~~~R  135 (190)
T TIGR00201        56 GQAEIIRALASLLSLTVSKAYRDLPDVIVPVPLSKEREWRRGFNQADLLAQCLSRWLFNYHNIVIRLNNETQSKLKATLR  135 (190)
T ss_pred             CChHHHHHHHHHHHHHHHhhccCCCCEEEeCCCCHHHHHHhCCCHHHHHHHHHHHHhCCCcceEEEecccccccCCHHHH
Confidence            46677778888877665432   358999998       48998877777666422   11 122222111111111011


Q ss_pred             eeccceeEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEe
Q 029741          108 LEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVV  162 (188)
Q Consensus       108 ~~~~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~  162 (188)
                      ...-.+.+.+... ...|++|||||||+|||+|+.++++.|+++|+++|.+++++
T Consensus       136 ~~n~~~~f~~~~~-~~~~~~vllvDDV~TTGaTl~~~~~~L~~~Ga~~V~~~~la  189 (190)
T TIGR00201       136 FLNLENAFDLKNN-SFQGRNIVLVDDVVTTGATLHEIARLLLELGAASVQVWTLA  189 (190)
T ss_pred             HHHHhCcEEccCC-CCCCCEEEEEeeeeccHHHHHHHHHHHHHcCCCEEEEEEEE
Confidence            0111234544322 35899999999999999999999999999999999999886

This protein is found in species that do (Bacillus subtilis, Haemophilus influenzae) or do not (E. coli, Borrelia burgdorferi) have described systems for natural transformation with exogenous DNA. It is involved in competence for transformation in Bacillus subtilis.

>PRK03092 ribose-phosphate pyrophosphokinase; Provisional

Probab=99.59  E-value=3.6e-14  Score=118.52  Aligned_cols=124  Identities=23%  Similarity=0.218  Sum_probs=89.8

Q ss_pred             HHHHHHHHHHhcCCCcEEEEeCCCChhhHHHHHHHhC-CCeEEEeecCCCCCcccchheeeeccceeEEEecCCCCCCCE
Q 029741           49 DTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIG-AKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGER  127 (188)
Q Consensus        49 ~l~~~la~~~~~~~~d~Iv~v~~gG~~~a~~lA~~l~-~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gk~  127 (188)
                      .+++.+.+.+.. +..+|++|+.||+.+|..+|..++ .|+.++.|.+....          .+.... .......+||+
T Consensus       136 ~la~~i~~~~~~-~~~vvVspd~Ga~~~a~~la~~L~~~~~~~i~k~R~~~~----------~~~~~~-~~~~~dv~gr~  203 (304)
T PRK03092        136 LLADYVRDKYDL-DNVTVVSPDAGRVRVAEQWADRLGGAPLAFIHKTRDPTV----------PNQVVA-NRVVGDVEGRT  203 (304)
T ss_pred             HHHHHHHHhcCC-CCcEEEEecCchHHHHHHHHHHcCCCCEEEEEEEcccCC----------CCceEE-EecCcCCCCCE
Confidence            344444433322 334899999999999999999999 99988877653110          011111 11122359999


Q ss_pred             EEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChh--hhhccCCCCeEEEEeccc
Q 029741          128 ALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLDGKPLYILVEPRL  184 (188)
Q Consensus       128 VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~--~~~~l~~~~~~~l~~~~~  184 (188)
                      |+||||+++||+|+.++++.|++.|++.+.+++.|....  +.+++....+..++..+.
T Consensus       204 viIVDDIi~TG~Tl~~aa~~Lk~~Ga~~I~~~~tH~v~~~~a~~~l~~~~~~~i~~t~t  262 (304)
T PRK03092        204 CVLVDDMIDTGGTIAGAVRALKEAGAKDVIIAATHGVLSGPAAERLKNCGAREVVVTDT  262 (304)
T ss_pred             EEEEccccCcHHHHHHHHHHHHhcCCCeEEEEEEcccCChHHHHHHHHCCCCEEEEeee
Confidence            999999999999999999999999999999999887653  567776555666666554

>PRK01259 ribose-phosphate pyrophosphokinase; Provisional

Probab=99.59  E-value=3.8e-14  Score=118.71  Aligned_cols=110  Identities=21%  Similarity=0.270  Sum_probs=84.8

Q ss_pred             CCcEEEEeCCCChhhHHHHHHHhCCCeEEEeecCCCCCcccchheeeeccceeEEEecCCCCCCCEEEEEcCcccchHHH
Q 029741           62 GISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTL  141 (188)
Q Consensus        62 ~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl  141 (188)
                      +..+|++|+.||..+|..+|..||+|+.++.|.+..++.           ...+.+. + ..+|++|+||||+++||+|+
T Consensus       158 ~~~vvv~pd~Gg~~~A~~la~~Lg~~~~~~~k~r~~~~~-----------~~~~~~~-~-~~~g~~vliVDDii~TG~T~  224 (309)
T PRK01259        158 ENLVVVSPDVGGVVRARALAKRLDADLAIIDKRRPRANV-----------SEVMNII-G-DVEGRDCILVDDMIDTAGTL  224 (309)
T ss_pred             CCcEEEEECCCcHHHHHHHHHHhCCCEEEEEeeccccee-----------EEEEeec-c-cCCCCEEEEEecccCcHHHH
Confidence            556999999999999999999999999888766532111           0112221 2 35899999999999999999


Q ss_pred             HHHHHHHHHcCCeEEEEEEEeeChh--hhhccCCCCeEEEEeccc
Q 029741          142 SAAVRLLERMGAEVVECACVVGLPE--GQRRLDGKPLYILVEPRL  184 (188)
Q Consensus       142 ~~~~~~L~~~Ga~~v~v~~l~~~~~--~~~~l~~~~~~~l~~~~~  184 (188)
                      ..+++.|+++|++.+.++++|....  +.+++....+..++..+.
T Consensus       225 ~~a~~~l~~~Ga~~v~~~~tH~i~~~~a~~~l~~~~~~~iv~t~t  269 (309)
T PRK01259        225 CKAAEALKERGAKSVYAYATHPVLSGGAIERIENSVIDELVVTDS  269 (309)
T ss_pred             HHHHHHHHccCCCEEEEEEEeeeCChHHHHHHhcCCCCEEEEecC
Confidence            9999999999999999999987643  556665445666655544

>PRK00553 ribose-phosphate pyrophosphokinase; Provisional

Probab=99.58  E-value=5.1e-14  Score=118.85  Aligned_cols=108  Identities=23%  Similarity=0.281  Sum_probs=85.9

Q ss_pred             cEEEEeCCCChhhHHHHHHHhCCCeEEEeecCCCCCcccchheeeeccceeEEEecCCCCCCCEEEEEcCcccchHHHHH
Q 029741           64 SVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSA  143 (188)
Q Consensus        64 d~Iv~v~~gG~~~a~~lA~~l~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~  143 (188)
                      .+|++|+.||..+|..+|..+|+|+.+++|++.....           ...+.+. +. .+||+|+||||+++||+|+.+
T Consensus       170 ~vvVsPD~gg~~rA~~lA~~lg~~~~vi~K~r~~~~~-----------~~~~~~~-gd-v~Gk~VIIVDDIi~TG~Tl~~  236 (332)
T PRK00553        170 LVVVSPDYGGVKRARLIAESLELPLAIIDKRRPKHNV-----------AESINVL-GE-VKNKNCLIVDDMIDTGGTVIA  236 (332)
T ss_pred             eEEEEECCCcHHHHHHHHHHhCCCEEEEEEecCCcce-----------EeeEEee-cc-CCCCEEEEEeccccchHHHHH
Confidence            4899999999999999999999999988876532110           1122221 33 599999999999999999999


Q ss_pred             HHHHHHHcCCeEEEEEEEeeChh--hhhccCC----CCeEEEEeccc
Q 029741          144 AVRLLERMGAEVVECACVVGLPE--GQRRLDG----KPLYILVEPRL  184 (188)
Q Consensus       144 ~~~~L~~~Ga~~v~v~~l~~~~~--~~~~l~~----~~~~~l~~~~~  184 (188)
                      +++.|+++||+.+++++.|....  +.+++..    .++..+++.+.
T Consensus       237 aa~~Lk~~GA~~V~~~atHglf~~~a~~~l~~~~~~~~i~~iv~Tnt  283 (332)
T PRK00553        237 AAKLLKKQKAKKVCVMATHGLFNKNAIQLFDEAFKKKLIDKLFVSNS  283 (332)
T ss_pred             HHHHHHHcCCcEEEEEEEeeecCchHHHHHHhccccCCCCEEEEeCC
Confidence            99999999999999999998654  5566643    36888877765

>PRK02458 ribose-phosphate pyrophosphokinase; Provisional

Probab=99.58  E-value=3.5e-14  Score=119.45  Aligned_cols=107  Identities=22%  Similarity=0.313  Sum_probs=85.3

Q ss_pred             cEEEEeCCCChhhHHHHHHHhCCCeEEEeecCCCCCcccchheeeeccceeEEEecCCCCCCCEEEEEcCcccchHHHHH
Q 029741           64 SVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSA  143 (188)
Q Consensus        64 d~Iv~v~~gG~~~a~~lA~~l~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~  143 (188)
                      .+|++|+.||..+|..+|..|++|+.++++.+....          ....  .+ .+ ..+||+|+|||||++||+|+.+
T Consensus       171 ~vvV~pd~Ga~~~A~~la~~L~~~~~~~~~~r~~~~----------~~~~--~i-~g-dV~gk~viIVDDIidTG~Tl~~  236 (323)
T PRK02458        171 VVVVSPKNSGIKRARSLAEYLDAPIAIIDYAQDDSE----------REEG--YI-IG-DVAGKKAILIDDILNTGKTFAE  236 (323)
T ss_pred             eEEEEECCChHHHHHHHHHHhCCCEEEEEEecCCCc----------ceee--cc-cc-ccCCCEEEEEcceeCcHHHHHH
Confidence            489999999999999999999999987765432110          0011  11 13 3599999999999999999999


Q ss_pred             HHHHHHHcCCeEEEEEEEeeChh--hhhccCCCCeEEEEeccc
Q 029741          144 AVRLLERMGAEVVECACVVGLPE--GQRRLDGKPLYILVEPRL  184 (188)
Q Consensus       144 ~~~~L~~~Ga~~v~v~~l~~~~~--~~~~l~~~~~~~l~~~~~  184 (188)
                      +++.|+++||++|.+++.|....  +.+++...++..+++.+.
T Consensus       237 aa~~Lk~~GA~~V~~~~tHgif~~~a~~~l~~s~i~~iv~TdT  279 (323)
T PRK02458        237 AAKIVEREGATEIYAVASHGLFAGGAAEVLENAPIKEILVTDS  279 (323)
T ss_pred             HHHHHHhCCCCcEEEEEEChhcCchHHHHHhhCCCCEEEEECC
Confidence            99999999999999999998754  556777667888877765

>PTZ00149 hypoxanthine phosphoribosyltransferase; Provisional

Probab=99.57  E-value=3.9e-14  Score=114.25  Aligned_cols=122  Identities=17%  Similarity=0.195  Sum_probs=89.9

Q ss_pred             echhhhcCHHHHHHHHHHHHHHHhcC---CCcEEEEeCCCChhhHHHHHHHhCC---------C--e---EEEeecCCCC
Q 029741           36 DITTLLLDHKAFKDTVDIFVDRYRDM---GISVVAGIEARGFVFGPSIALAIGA---------K--F---VPLRKPNKLP   98 (188)
Q Consensus        36 d~~~ll~~~~~~~~l~~~la~~~~~~---~~d~Iv~v~~gG~~~a~~lA~~l~~---------p--~---~~~~k~~~~~   98 (188)
                      ++..++.+.+.++...+.||.++.+.   +..+|+|+..||+.|+..|.+.++.         |  .   .+++-.    
T Consensus        52 ~~~~vLis~~~I~~rI~~LA~~I~~dy~~~~~vilgILkGg~~FaadL~~~L~~~~~~~~~~~~~~~~~~dfi~vs----  127 (241)
T PTZ00149         52 YLTKILLPNGLIKDRVEKLAYDIKQVYGNEELHILCILKGSRGFFSALVDYLNRIHNYSSTESPKPPYQEHYVRVK----  127 (241)
T ss_pred             cccEEEeCHHHHHHHHHHHHHHHHHHcCCCCeEEEEECCCCHHHHHHHHHHHhhhhhccccccCcccccccEEEEE----
Confidence            35567788888888888888877643   4569999999999999999999872         2  1   222211    


Q ss_pred             CcccchheeeeccceeEEEec--CCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChhh
Q 029741           99 GEVISEAYVLEYGTDRLEMHV--GAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEG  167 (188)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~l~~--~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~~  167 (188)
                            +|....++..+.+..  ....+||+|||||||++||+|+.++++.|++.|++.+.+++++.++..
T Consensus       128 ------SY~~~~s~g~v~i~~~~~~~l~gk~VLIVDDIidTG~Tl~~~~~~L~~~g~~~V~va~L~~K~~~  192 (241)
T PTZ00149        128 ------SYCNDESTGKLEIVSDDLSCLKDKHVLIVEDIIDTGNTLVKFCEYLKKFEPKTIRIATLFEKRTP  192 (241)
T ss_pred             ------EccCCCcCCceEEecccccccCCCEEEEEEeEeChHHHHHHHHHHHHhcCCCEEEEEEEEecCcc
Confidence                  121111222232221  123699999999999999999999999999999999999999998753

>PRK06827 phosphoribosylpyrophosphate synthetase; Provisional

Probab=99.57  E-value=6.8e-14  Score=119.73  Aligned_cols=115  Identities=20%  Similarity=0.316  Sum_probs=87.0

Q ss_pred             CCcEEEEeCCCChhhHHHHHHHhCCCeEEEeecCCCCCcccchheeeecccee-EEEe-cCCCCCCCEEEEEcCcccchH
Q 029741           62 GISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDR-LEMH-VGAIEPGERALVIDDLVATGG  139 (188)
Q Consensus        62 ~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~-~~l~-~~~~~~Gk~VLIVDDvi~TG~  139 (188)
                      +..+|++|+.||..+|..+|..|++|+.+++|++......        .+++. .... .+...+|++|+||||+++||+
T Consensus       207 ~~~VVVsPD~Gg~~rA~~~A~~Lg~~~ai~~K~R~~~~~~--------~g~~~~~~~~~~g~dV~gr~vIIVDDII~TG~  278 (382)
T PRK06827        207 DHLMVISPDTGAMDRAKYYASVLGVDLGLFYKRRDYSRVV--------NGRNPIVAHEFLGRDVEGKDVLIVDDMIASGG  278 (382)
T ss_pred             CCcEEEEECccchHHHHHHHHHhCCCEEEEEcccCCcccc--------cCCCceEEEecCCcccCCCEEEEEeCCcCcHH
Confidence            3469999999999999999999999999988876322111        11111 1111 132469999999999999999


Q ss_pred             HHHHHHHHHHHcCCeEEEEEEEeeC-hhhhhccCC----CCeEEEEeccc
Q 029741          140 TLSAAVRLLERMGAEVVECACVVGL-PEGQRRLDG----KPLYILVEPRL  184 (188)
Q Consensus       140 Tl~~~~~~L~~~Ga~~v~v~~l~~~-~~~~~~l~~----~~~~~l~~~~~  184 (188)
                      |+..+++.|+++||+.+.++++|.. +++.+++..    -+++.++..+.
T Consensus       279 Tl~~aa~~Lk~~GA~~V~~~~tH~vf~~a~~~l~~~~~~g~i~~iv~TdT  328 (382)
T PRK06827        279 SMIDAAKELKSRGAKKIIVAATFGFFTNGLEKFDKAYEEGYFDRIIGTNL  328 (382)
T ss_pred             HHHHHHHHHHHcCCCEEEEEEEeecChHHHHHHHhhcccCCCCEEEEeCC
Confidence            9999999999999999999999987 446666532    24777776655

>PRK05793 amidophosphoribosyltransferase; Provisional

Probab=99.57  E-value=2.9e-14  Score=125.45  Aligned_cols=119  Identities=20%  Similarity=0.214  Sum_probs=86.5

Q ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEeCCCChhhHHHHHHHhCCCeEE-EeecCCCCCcccchheeeeccceeEEEec-CCC
Q 029741           45 KAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVP-LRKPNKLPGEVISEAYVLEYGTDRLEMHV-GAI  122 (188)
Q Consensus        45 ~~~~~l~~~la~~~~~~~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~-~~k~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~  122 (188)
                      .....+++.|++.... +.|+|+++|.+|.++|..+|+.+|+|+.. +.+.+.....++..+...+.....+.+.. ...
T Consensus       272 ~~R~~~G~~La~~~~~-~~D~Vv~vPdsg~~~A~~~A~~lgip~~~~l~r~~~~~rtfi~~~q~~R~~~~~~k~~~~~~~  350 (469)
T PRK05793        272 ESRVRAGRQLYKEYPV-DADIVIGVPDSGIPAAIGYAEASGIPYGIGFIKNKYVGRTFIAPSQELRERAVRVKLNPLKVN  350 (469)
T ss_pred             HHHHHHHHHHHHhcCC-CCCEEEEcCccHHHHHHHHHHHhCCCEeeeEEEeeeccccccChhHhhhhhhheEecccCccc
Confidence            4556889999987753 67899999999999999999999999964 33333222222222111111111232221 123


Q ss_pred             CCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeC
Q 029741          123 EPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGL  164 (188)
Q Consensus       123 ~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~  164 (188)
                      .+||+|+||||+++||+|+.++++.|+++||++|.+++.+..
T Consensus       351 v~gk~VlLVDD~ItTGtTl~~~~~~Lr~aGAk~V~~~~~~p~  392 (469)
T PRK05793        351 VEGKRVVLIDDSIVRGTTSKRLVELLRKAGAKEVHFRVSSPP  392 (469)
T ss_pred             cCCCEEEEEccccCchHHHHHHHHHHHHcCCCEEEEEEECCC
Confidence            589999999999999999999999999999999999988875

>PLN02440 amidophosphoribosyltransferase

Probab=99.56  E-value=2.4e-14  Score=126.18  Aligned_cols=118  Identities=21%  Similarity=0.258  Sum_probs=84.4

Q ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEeCCCChhhHHHHHHHhCCCeEE-EeecCCCCCcccchheeeeccceeEEEec-CCC
Q 029741           45 KAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVP-LRKPNKLPGEVISEAYVLEYGTDRLEMHV-GAI  122 (188)
Q Consensus        45 ~~~~~l~~~la~~~~~~~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~-~~k~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~  122 (188)
                      .....+++.|++.+.. ++|+|+++|.+|..+|..+|..+++|+.. +.|.+.....++..++..+....++.+.. ...
T Consensus       259 ~~r~~~g~~La~~~~~-~~d~vvpVP~s~~~~A~~la~~lgiP~~~~lvr~ry~~rt~i~~~q~~r~~~~~~k~~~~~~~  337 (479)
T PLN02440        259 ESRLEFGEILATEIPV-DCDVVIPVPDSGRVAALGYAAKLGVPFQQGLIRSHYVGRTFIEPSQKIRDFSVKLKLNPVRSV  337 (479)
T ss_pred             HHHHHHHHHHHHhcCC-CCCEEEEeCCcHHHHHHHHHHHhCCCchhheEEEeeccccccCcchhhhhhhheeeeeccccc
Confidence            4556777888877743 68999999999999999999999999852 22233222222211111111111233321 123


Q ss_pred             CCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEee
Q 029741          123 EPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVG  163 (188)
Q Consensus       123 ~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~  163 (188)
                      .+||+||||||++|||+|+.++++.|+++||++|.++++..
T Consensus       338 v~gk~VlLVDDiittGtTl~~i~~~L~~aGa~~V~v~v~~p  378 (479)
T PLN02440        338 LEGKRVVVVDDSIVRGTTSSKIVRMLREAGAKEVHMRIASP  378 (479)
T ss_pred             ccCceEEEEeceeCcHHHHHHHHHHHHhcCCCEEEEEEECC
Confidence            69999999999999999999999999999999999998873

>PRK07349 amidophosphoribosyltransferase; Provisional

Probab=99.56  E-value=2.2e-14  Score=126.58  Aligned_cols=117  Identities=17%  Similarity=0.231  Sum_probs=83.1

Q ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEeCCCChhhHHHHHHHhCCCeEE-EeecCCCCCcccchheeeeccceeEEEe-cCCC
Q 029741           45 KAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVP-LRKPNKLPGEVISEAYVLEYGTDRLEMH-VGAI  122 (188)
Q Consensus        45 ~~~~~l~~~la~~~~~~~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~-~~k~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~  122 (188)
                      +....+++.|++... .++|+|+++|.+|+++|..+|..+|+|+.. +.|++....+++..++..+....++.+. ....
T Consensus       296 ~~R~~~G~~La~~~~-~~~DvVv~VP~sg~~~A~g~A~~lgip~~~~L~r~~y~grtfi~p~q~~R~~~~~~kl~~~~~~  374 (500)
T PRK07349        296 SYRQRLGQQLAKESP-VDADLVIGVPDSGIPAAIGFSQASGIPYAEGLIKNRYVGRTFIQPTQSMRESGIRMKLNPLKDV  374 (500)
T ss_pred             HHHHHHHHHHhhhcc-cCCcEEEEeccccHHHHHHHHHHHCCCchhceEEEeccCccccCCCHHHHHhhhheeeeccccc
Confidence            566788888886553 368999999999999999999999999863 3444333222221111111111122222 1234


Q ss_pred             CCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEe
Q 029741          123 EPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVV  162 (188)
Q Consensus       123 ~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~  162 (188)
                      .+||+|+||||++|||+|+.+++++|+++||++|.+....
T Consensus       375 ~~gkrVlLVDDvIttGtTl~~~~~~Lr~aGAkeV~~~i~s  414 (500)
T PRK07349        375 LAGKRIIIVDDSIVRGTTSRKIVKALRDAGATEVHMRISS  414 (500)
T ss_pred             cCCCEEEEEeceeCCcHHHHHHHHHHHHhCCeEEEEEeCC
Confidence            5899999999999999999999999999999998876443

>PRK09123 amidophosphoribosyltransferase; Provisional

Probab=99.54  E-value=7.9e-14  Score=122.80  Aligned_cols=115  Identities=18%  Similarity=0.193  Sum_probs=83.7

Q ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEeCCCChhhHHHHHHHhCCCeEE-EeecCCCCCcccchheeeeccceeEEEec-CCC
Q 029741           45 KAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVP-LRKPNKLPGEVISEAYVLEYGTDRLEMHV-GAI  122 (188)
Q Consensus        45 ~~~~~l~~~la~~~~~~~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~-~~k~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~  122 (188)
                      +..+.+++.|++.... ++|+|+++|.+|+++|..+|..+++|+.. +.|.+....++.......+...-++.... ...
T Consensus       279 ~~R~~~g~~La~~~~~-~~D~Vv~VP~sg~~~A~~la~~lgip~~~~lir~~y~grt~i~~~q~~r~~~v~~k~~~~~~~  357 (479)
T PRK09123        279 EVRKNIGRELARESPV-DADVVVPVPDSGVPAAIGYAQESGIPFELGIIRNHYVGRTFIQPTQQIRNLGVKLKHNANRAV  357 (479)
T ss_pred             HHHHHHHHHHHHhCCC-CCeEEEEcCccHHHHHHHHHHhcCCCeeheEEEEeecCccccccccccccccEEEEecccccc
Confidence            6777888888877653 78999999999999999999999999863 22333332222222111111111222221 233


Q ss_pred             CCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEE
Q 029741          123 EPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECAC  160 (188)
Q Consensus       123 ~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~  160 (188)
                      .+||+|+||||+++||+|+.++++.|+++||+.|.+++
T Consensus       358 ~~gk~vvlvDD~i~tG~Tl~~~~~~l~~~Ga~~v~~~~  395 (479)
T PRK09123        358 IEGKRVVLVDDSIVRGTTSRKIVQMLRDAGAKEVHLRI  395 (479)
T ss_pred             cCCCEEEEEeceeCchHHHHHHHHHHHHcCCCEEEEEE
Confidence            68999999999999999999999999999999999877

>COG2236 Predicted phosphoribosyltransferases [General function prediction only]

Probab=99.54  E-value=3.5e-14  Score=110.68  Aligned_cols=115  Identities=17%  Similarity=0.303  Sum_probs=81.0

Q ss_pred             hhcCHHHHHHHHHHHHHHHhc--CCCcEEEEeCCCChhhHHHHHHHhCC-CeEEEeecCCCCCcccchheeeeccceeEE
Q 029741           40 LLLDHKAFKDTVDIFVDRYRD--MGISVVAGIEARGFVFGPSIALAIGA-KFVPLRKPNKLPGEVISEAYVLEYGTDRLE  116 (188)
Q Consensus        40 ll~~~~~~~~l~~~la~~~~~--~~~d~Iv~v~~gG~~~a~~lA~~l~~-p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~  116 (188)
                      .+.+++.++.++..+|+++.+  .+||+|+++.+||+.+|..|++.|++ |+..+.-..... .     .. ..+...+.
T Consensus         5 ~~vSw~~I~~~~~~lA~kI~~s~~~PDvIiaiaRGG~~pariLsd~L~~~~l~~i~v~~y~~-~-----~~-~~~~~~v~   77 (192)
T COG2236           5 LYVSWEEIHRLCRALAEKIRASGFKPDVIVAIARGGLIPARILSDFLGVKPLYSIKVEHYDE-T-----AE-RDGEAKVK   77 (192)
T ss_pred             EEecHHHHHHHHHHHHHHHHHcCCCCCEEEEEcCCceehHHHHHHHhCCCceEEEEEEEehh-h-----cc-cCCcceee
Confidence            456888999999999999973  58999999999999999999999998 554443222100 0     00 00111111


Q ss_pred             EecCCC-CCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEE
Q 029741          117 MHVGAI-EPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACV  161 (188)
Q Consensus       117 l~~~~~-~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l  161 (188)
                      -..... ..||+|||||||.+||.||..+.+.|++.....+.++++
T Consensus        78 ~~~~~d~l~GkkVLIVDDI~DTG~Tl~~a~~~l~~~~p~e~rta~l  123 (192)
T COG2236          78 YPITIDPLSGKKVLIVDDIVDTGETLELALEELKKLAPAEVRTAVL  123 (192)
T ss_pred             cCccccccCCCeEEEEecccCchHhHHHHHHHHHhhCchhhhhhhh
Confidence            111111 699999999999999999999999999955554544433

>PRK06781 amidophosphoribosyltransferase; Provisional

Probab=99.53  E-value=3e-14  Score=125.14  Aligned_cols=117  Identities=22%  Similarity=0.228  Sum_probs=85.1

Q ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEeCCCChhhHHHHHHHhCCCeEE-EeecCCCCCcccchheeeecc--ceeEEEecCC
Q 029741           45 KAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVP-LRKPNKLPGEVISEAYVLEYG--TDRLEMHVGA  121 (188)
Q Consensus        45 ~~~~~l~~~la~~~~~~~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~-~~k~~~~~~~~~~~~~~~~~~--~~~~~l~~~~  121 (188)
                      +....+++.|++... .+.|+|+++|..|.+.|..+|..+|+|+.. +.|++....++...+...+..  +..+... ..
T Consensus       267 ~~R~~~G~~La~~~~-~~~D~vv~VP~s~~~~A~~~a~~~gip~~~~lik~~~~~rt~~~~~~~~R~~~v~~~f~~~-~~  344 (471)
T PRK06781        267 AARKNMGKRLAAEAP-IEADVVTGVPDSSISAAIGYAEATGIPYELGLIKNRYVGRTFIQPSQELREQGVKMKLSAV-RG  344 (471)
T ss_pred             HHHHHHHHHHhhhCC-CCCcEEEEcChhHHHHHHHHHHHhCCCcccceEEEccCCCCCcCCCHHHHHHHHhcceecc-cc
Confidence            667789999998764 368999999999999999999999999854 334333322222111111111  1233322 23


Q ss_pred             CCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEee
Q 029741          122 IEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVG  163 (188)
Q Consensus       122 ~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~  163 (188)
                      ..+||+|+||||++|||+|+.++++.|+++||++|.+.+...
T Consensus       345 ~i~gk~VlLVDDvittGtTl~~~~~~Lk~aGA~eV~v~i~sP  386 (471)
T PRK06781        345 VVEGKRVVMIDDSIVRGTTSKRIVRMLREAGATEVHVRIASP  386 (471)
T ss_pred             ccCCceEEEEeceeccchHHHHHHHHHHHcCCcEEEEEECCC
Confidence            468999999999999999999999999999999988775543

>TIGR01251 ribP_PPkin ribose-phosphate pyrophosphokinase

Probab=99.52  E-value=2.7e-13  Score=113.59  Aligned_cols=111  Identities=21%  Similarity=0.287  Sum_probs=84.7

Q ss_pred             CCcEEEEeCCCChhhHHHHHHHhCCCeEEEeecCCCCCcccchheeeeccceeEEEecCCCCCCCEEEEEcCcccchHHH
Q 029741           62 GISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTL  141 (188)
Q Consensus        62 ~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl  141 (188)
                      +.++|++++.||+.+|..+|..||+|+.+++|.+.....           ..... ......+|++|+||||+++||+|+
T Consensus       159 ~~~viv~pd~g~~~~A~~lA~~Lg~~~~~i~k~r~~~~~-----------~~~~~-~~~~~v~g~~vliVDDii~tG~Tl  226 (308)
T TIGR01251       159 DNPVVVSPDAGGVERAKKVADALGCPLAIIDKRRISATN-----------EVEVM-NLVGDVEGKDVVIVDDIIDTGGTI  226 (308)
T ss_pred             CCCEEEEECCchHHHHHHHHHHhCCCEEEEEEEecCCCC-----------EEEEE-ecccccCCCEEEEEccccCCHHHH
Confidence            456999999999999999999999999988776542110           00011 112235899999999999999999


Q ss_pred             HHHHHHHHHcCCeEEEEEEEeeC--hhhhhccCCCCeEEEEeccc
Q 029741          142 SAAVRLLERMGAEVVECACVVGL--PEGQRRLDGKPLYILVEPRL  184 (188)
Q Consensus       142 ~~~~~~L~~~Ga~~v~v~~l~~~--~~~~~~l~~~~~~~l~~~~~  184 (188)
                      ..+++.|++.|++++.+++.|..  +++.+++....+..+++.+.
T Consensus       227 ~~a~~~l~~~ga~~v~~~~th~v~~~~a~~~l~~~~~~~iv~tdt  271 (308)
T TIGR01251       227 AKAAEILKSAGAKRVIAAATHGVFSGPAIERIANAGVEEVIVTNT  271 (308)
T ss_pred             HHHHHHHHhcCCCEEEEEEEeeecCcHHHHHHHhCCCCEEEEeCC
Confidence            99999999999999999999863  33556665444666666655

In some systems, close homologs lacking enzymatic activity exist and perform regulatory functions. The model is designated subfamily rather than equivalog for this reason.

>TIGR01134 purF amidophosphoribosyltransferase

Probab=99.52  E-value=5.4e-14  Score=122.98  Aligned_cols=115  Identities=22%  Similarity=0.213  Sum_probs=82.0

Q ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEeCCCChhhHHHHHHHhCCCeEE-EeecCCCCCcccchheeeec-c-ceeEEEecCC
Q 029741           45 KAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVP-LRKPNKLPGEVISEAYVLEY-G-TDRLEMHVGA  121 (188)
Q Consensus        45 ~~~~~l~~~la~~~~~~~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~-~~k~~~~~~~~~~~~~~~~~-~-~~~~~l~~~~  121 (188)
                      .....+++.|++... .++|+|+++|..|+++|..+|..+|+|+.. +.|++.....++...+..+. + ...+... ..
T Consensus       257 ~~R~~~g~~La~~~~-~~~D~Vv~VP~sg~~~A~~la~~lgip~~~~l~r~~~~~r~~i~~~q~~R~~~v~~k~~~~-~~  334 (442)
T TIGR01134       257 KARKRMGEKLARESP-VEADVVIPVPDSGRSAALGFAQASGIPYREGLIKNRYVGRTFIMPTQELRELSVRLKLNPI-RE  334 (442)
T ss_pred             HHHHHHHHHHHHhcC-CCCEEEEEccCCHHHHHHHHHHHhCCCchHHeEEeccccccccCCCHHHHHHHHhhhcccc-cc
Confidence            556788888887653 378999999999999999999999999863 33333222222111111011 0 1122111 22


Q ss_pred             CCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEE
Q 029741          122 IEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACV  161 (188)
Q Consensus       122 ~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l  161 (188)
                      ..+||+|+||||++|||+|+.++++.|+++|++++.+.+.
T Consensus       335 ~~~gk~v~lvDD~ittG~T~~~~~~~l~~~ga~~v~~~~~  374 (442)
T TIGR01134       335 VFRGKRVVLVDDSIVRGTTSRQIVKMLRDAGAKEVHVRIA  374 (442)
T ss_pred             cCCCCEEEEEeccccccHHHHHHHHHHHHcCCcEEEEEEc
Confidence            3589999999999999999999999999999999998776

Alternate name: glutamine phosphoribosylpyrophosphate (PRPP) amidotransferase.

>PRK07272 amidophosphoribosyltransferase; Provisional

Probab=99.52  E-value=5.3e-14  Score=123.83  Aligned_cols=115  Identities=22%  Similarity=0.286  Sum_probs=82.8

Q ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEeCCCChhhHHHHHHHhCCCeEE-EeecCCCCCcccchheeeec-c-ceeEEEecCC
Q 029741           45 KAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVP-LRKPNKLPGEVISEAYVLEY-G-TDRLEMHVGA  121 (188)
Q Consensus        45 ~~~~~l~~~la~~~~~~~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~-~~k~~~~~~~~~~~~~~~~~-~-~~~~~l~~~~  121 (188)
                      .....+++.|++.+.. +.|+|+++|..|..+|..+|..+|+|+.. +.|++.....+...++..+. + +..+... ..
T Consensus       269 ~~R~~lg~~La~~~~~-~~D~VvpVPnqa~~lA~~la~~lgip~~~~lvk~~~~~rt~~~~~q~~R~~~vr~~f~~~-~~  346 (484)
T PRK07272        269 TARKRMGKRLAQEFPH-DADIVIGVPNSSLSAASGYAEESGLPYEMGLVKNQYVARTFIQPTQELREQGVRMKLSAV-SG  346 (484)
T ss_pred             HHHHHHHHHHHhhcCC-CCCEEEEecHHHHHHHHHHHHHHCCCcccCeEEEccCCccccCCCHHHHHHHHhhCcccc-cc
Confidence            4446788888876643 57999999999999999999999999843 33333332222211111111 1 1123221 23


Q ss_pred             CCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEE
Q 029741          122 IEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACV  161 (188)
Q Consensus       122 ~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l  161 (188)
                      ..+||+|+||||++|||+|+.++++.|+++||+.+.+++.
T Consensus       347 ~~~gk~vllVDDvittG~T~~~~~~~L~~~Ga~~v~~~~~  386 (484)
T PRK07272        347 VVKGKRVVMVDDSIVRGTTSRRIVQLLKEAGAKEVHVAIA  386 (484)
T ss_pred             ccCCCEEEEEccccCchHHHHHHHHHHHhcCCcEEEEEEe
Confidence            4689999999999999999999999999999999999998

>PRK08341 amidophosphoribosyltransferase; Provisional

Probab=99.51  E-value=1.3e-13  Score=120.27  Aligned_cols=115  Identities=18%  Similarity=0.172  Sum_probs=84.5

Q ss_pred             HHHHHHHHHHHHHHHhcCCCcEEEEeCCCChhhHHHHHHHhCCCeEE-EeecCCCCCcccchheeeeccceeEEEec-CC
Q 029741           44 HKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVP-LRKPNKLPGEVISEAYVLEYGTDRLEMHV-GA  121 (188)
Q Consensus        44 ~~~~~~l~~~la~~~~~~~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~-~~k~~~~~~~~~~~~~~~~~~~~~~~l~~-~~  121 (188)
                      ......+++.|++... .++|+|+++|..|..+|..+|..+|+|+.. +.|++.....++..++  +.....+.+.. ..
T Consensus       254 ~~~R~~~G~~La~~~~-~~~D~Vv~VPdsg~~~A~~~a~~lgip~~~~l~k~r~~~rtfi~~~q--r~~~~~~k~~~~~~  330 (442)
T PRK08341        254 YSARYRMGVELARESP-AEGDVVIAVPDSGRTAALGFAHESGIPYMEGLIKNRYIGRTFIMPSG--RELKVKLKLSPVRE  330 (442)
T ss_pred             HHHHHHHHHHhhcccC-CCCceEEEecCchHHHHHHHHHHhCCCchheEEEeccccccccCcCc--hhhhheeeeccccc
Confidence            3566788888887664 368999999999999999999999999964 5555433333322211  11111222211 22


Q ss_pred             CCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEE
Q 029741          122 IEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACV  161 (188)
Q Consensus       122 ~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l  161 (188)
                      ..+||+|+||||++|||+|+.++++.|+++||++|.+.+.
T Consensus       331 ~v~gk~VlLVDD~IttGtTl~~~~~~L~~aGAk~V~~~~~  370 (442)
T PRK08341        331 VINGKRVVLVDDSIVRGTTMKRIVKMLRDAGAREVHVRIA  370 (442)
T ss_pred             ccCCCEEEEEeeeeccHHHHHHHHHHHHhcCCcEEEEEEc
Confidence            3589999999999999999999999999999999888763

>PRK09246 amidophosphoribosyltransferase; Provisional

Probab=99.51  E-value=7.6e-14  Score=123.71  Aligned_cols=118  Identities=19%  Similarity=0.185  Sum_probs=78.1

Q ss_pred             HHHHHHHHHHHHHhcCCCcEEEEeCCCChhhHHHHHHHhCCCeEE-EeecCCCCCcccchheeeecc--ceeEEEecCCC
Q 029741           46 AFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVP-LRKPNKLPGEVISEAYVLEYG--TDRLEMHVGAI  122 (188)
Q Consensus        46 ~~~~l~~~la~~~~~~~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~-~~k~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~  122 (188)
                      ..+.+++.+...+...+.|+|+++|.++..+|..+|..+++|+.. +.+++.....+...+...+..  ...+... ...
T Consensus       277 lg~~LA~~l~~~~~~~~~D~VvpVP~s~~~~A~~la~~lgip~~~~l~k~~~~~rt~i~~~q~~R~~~vr~~f~~~-~~~  355 (501)
T PRK09246        277 MGEKLAEKIKREWPDLDIDVVIPIPDTSRDAALEIARILGVPYREGFVKNRYVGRTFIMPGQAQRKKSVRQKLNAI-RAE  355 (501)
T ss_pred             HHHHHHHHHHHHhcCCCCcEEEEeCccHHHHHHHHHHHHCCCccceEEEEecccccccCcCHHHHHHHHHhhcCCc-ccc
Confidence            334444444334333347899999999999999999999999853 222222211111111100110  1122211 223


Q ss_pred             CCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeC
Q 029741          123 EPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGL  164 (188)
Q Consensus       123 ~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~  164 (188)
                      .+||+|+||||++|||+|+.++++.|+++||+.|.+++++..
T Consensus       356 v~gK~VlLVDDvitTGaTl~~~~~~L~~aGA~~V~v~v~ap~  397 (501)
T PRK09246        356 FKGKNVLLVDDSIVRGTTSEQIVQMAREAGAKKVYFASAAPP  397 (501)
T ss_pred             ccCCeEEEEeccccccHHHHHHHHHHHHcCCCEEEEEEEccc
Confidence            689999999999999999999999999999999999988653

>PRK06388 amidophosphoribosyltransferase; Provisional

Probab=99.51  E-value=1.9e-13  Score=120.15  Aligned_cols=118  Identities=17%  Similarity=0.193  Sum_probs=83.9

Q ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEeCCCChhhHHHHHHHhCCCeEE-EeecCCCCCcccchheeeeccceeEEEec-CCC
Q 029741           45 KAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVP-LRKPNKLPGEVISEAYVLEYGTDRLEMHV-GAI  122 (188)
Q Consensus        45 ~~~~~l~~~la~~~~~~~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~-~~k~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~  122 (188)
                      +....+++.|++... .+.|+|+++|..|.+.|..+|..+|+|+.. +.|.+.....+.......+....++.+.. ...
T Consensus       275 ~~R~~~G~~La~~~~-~~~D~VvpVP~s~~~~A~g~a~~~gip~~~~L~r~r~~~r~fi~~~q~~R~~~~~~kl~~~~~~  353 (474)
T PRK06388        275 QARVRMGMRLAKESP-VEADVVVPVPDSGRSQAIGFSMASGIPYTEGLIKNRYSERTFIMPTQSDRKAAIKLKLNPIREV  353 (474)
T ss_pred             HHHHHHHHHHHhhcc-CCCcEEEeeCCCcHHHHHHHHHHhCCCchhheEEecccCCcccCCchhhhhhceeEEecccccc
Confidence            556688888887653 367899999999999999999999999854 34444332222221111111111233221 223


Q ss_pred             CCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEee
Q 029741          123 EPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVG  163 (188)
Q Consensus       123 ~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~  163 (188)
                      .+||+||||||++|||+|+.+++++|+++||++|.+.....
T Consensus       354 i~gk~VlLVDDsittGtTl~~~~~~L~~aGak~V~~ri~sP  394 (474)
T PRK06388        354 ISGKRIVLVDDSIVRGNTMRFIVKIMRKYGAKEVHVRIGSP  394 (474)
T ss_pred             ccCceEEEEeCeECcHHHHHHHHHHHHHcCCCEEEEEeCCC
Confidence            58999999999999999999999999999999988765543

>PRK02812 ribose-phosphate pyrophosphokinase; Provisional

Probab=99.50  E-value=5e-13  Score=112.71  Aligned_cols=109  Identities=22%  Similarity=0.320  Sum_probs=85.2

Q ss_pred             CcEEEEeCCCChhhHHHHHHHhC-CCeEEEeecCCCCCcccchheeeeccceeEEEecCCCCCCCEEEEEcCcccchHHH
Q 029741           63 ISVVAGIEARGFVFGPSIALAIG-AKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTL  141 (188)
Q Consensus        63 ~d~Iv~v~~gG~~~a~~lA~~l~-~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl  141 (188)
                      ..+|++|+.||..+|..+|..|+ .|+.++.|++.....           ...+.+ .+ ..+|++|+||||+++||.|+
T Consensus       180 ~~vvVsPD~gg~~ra~~~A~~L~~~~~~~~~k~R~~~~~-----------~~~~~~-~~-~v~g~~viiVDDii~TG~T~  246 (330)
T PRK02812        180 DIVVVSPDVGGVARARAFAKKLNDAPLAIIDKRRQAHNV-----------AEVLNV-IG-DVKGKTAILVDDMIDTGGTI  246 (330)
T ss_pred             CeEEEEECCccHHHHHHHHHHhCCCCEEEEEeeccCCce-----------eeeEec-cc-cCCCCEEEEEccccCcHHHH
Confidence            35899999999999999999995 899888776532110           011221 12 35999999999999999999


Q ss_pred             HHHHHHHHHcCCeEEEEEEEeeChh--hhhccCCCCeEEEEeccc
Q 029741          142 SAAVRLLERMGAEVVECACVVGLPE--GQRRLDGKPLYILVEPRL  184 (188)
Q Consensus       142 ~~~~~~L~~~Ga~~v~v~~l~~~~~--~~~~l~~~~~~~l~~~~~  184 (188)
                      ..+++.|++.|++.+.+++.|....  +.+++...+++.++..+.
T Consensus       247 ~~a~~~L~~~Ga~~v~~~~tH~v~s~~a~~~l~~~~id~iv~tnt  291 (330)
T PRK02812        247 CEGARLLRKEGAKQVYACATHAVFSPPAIERLSSGLFEEVIVTNT  291 (330)
T ss_pred             HHHHHHHhccCCCeEEEEEEcccCChHHHHHHhhCCCCEEEEeCC
Confidence            9999999999999999999887643  666776556777777665

>PLN02369 ribose-phosphate pyrophosphokinase

Probab=99.50  E-value=6.8e-13  Score=110.78  Aligned_cols=108  Identities=19%  Similarity=0.234  Sum_probs=84.0

Q ss_pred             cEEEEeCCCChhhHHHHHHHh-CCCeEEEeecCCCCCcccchheeeeccceeEEEecCCCCCCCEEEEEcCcccchHHHH
Q 029741           64 SVVAGIEARGFVFGPSIALAI-GAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLS  142 (188)
Q Consensus        64 d~Iv~v~~gG~~~a~~lA~~l-~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~  142 (188)
                      -+|++|+.||..+|..++..+ +.|+.++.|.+.....           ...+.+  ....+|++|+||||+++||+|+.
T Consensus       153 ~vvVspd~gg~~~a~~~a~~l~~~~~~~l~k~R~~~~~-----------~~~~~~--~~~v~g~~viivDDii~TG~Tl~  219 (302)
T PLN02369        153 LVVVSPDVGGVARARAFAKKLSDAPLAIVDKRRQGHNV-----------AEVMNL--IGDVKGKVAIMVDDMIDTAGTIT  219 (302)
T ss_pred             eEEEEECcChHHHHHHHHHHcCCCCEEEEEEecCCcce-----------eeeEec--CCCCCCCEEEEEcCcccchHHHH
Confidence            389999999999999999999 7899888876532110           111222  22358999999999999999999


Q ss_pred             HHHHHHHHcCCeEEEEEEEeeCh--hhhhccCCCCeEEEEeccc
Q 029741          143 AAVRLLERMGAEVVECACVVGLP--EGQRRLDGKPLYILVEPRL  184 (188)
Q Consensus       143 ~~~~~L~~~Ga~~v~v~~l~~~~--~~~~~l~~~~~~~l~~~~~  184 (188)
                      ++++.|++.|++++.+++.|...  ++.+++....+..++..+.
T Consensus       220 ~a~~~l~~~Ga~~v~~~~tH~v~~~~a~~~l~~~~~~~iv~t~t  263 (302)
T PLN02369        220 KGAALLHQEGAREVYACATHAVFSPPAIERLSSGLFQEVIVTNT  263 (302)
T ss_pred             HHHHHHHhCCCCEEEEEEEeeeeCHHHHHHHHhCCCCEEEEeCC
Confidence            99999999999999999987653  3666776556777776655

>PTZ00145 phosphoribosylpyrophosphate synthetase; Provisional

Probab=99.49  E-value=5.5e-13  Score=115.38  Aligned_cols=109  Identities=23%  Similarity=0.351  Sum_probs=87.7

Q ss_pred             CcEEEEeCCCChhhHHHHHHHhC------CCeEEEeecCCCCCcccchheeeeccceeEEEecCCCCCCCEEEEEcCccc
Q 029741           63 ISVVAGIEARGFVFGPSIALAIG------AKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVA  136 (188)
Q Consensus        63 ~d~Iv~v~~gG~~~a~~lA~~l~------~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gk~VLIVDDvi~  136 (188)
                      ..+||+|+.||...|..+|..|+      +++.++.|.+..+...           ..+.+. + ..+|++|+|||||++
T Consensus       280 ~pVVVsPD~Ga~~RAr~~A~~L~~~~~~~~~~avl~K~R~~~~~v-----------~~~~lv-g-dV~Gk~vIIVDDIId  346 (439)
T PTZ00145        280 KPVIVSPDAGGVYRARKFQDGLNHRGISDCGIAMLIKQRTKPNEI-----------EKMDLV-G-NVYDSDVIIVDDMID  346 (439)
T ss_pred             ccEEEccCcchHHHHHHHHHHhccccccCCCEEEEEeecCCCCce-----------EEEecc-C-CCCCCEEEEEcceeC
Confidence            34899999999999999999997      7888887766432210           112221 3 359999999999999


Q ss_pred             chHHHHHHHHHHHHcCCeEEEEEEEeeChh--hhhccCCCCeEEEEeccc
Q 029741          137 TGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLDGKPLYILVEPRL  184 (188)
Q Consensus       137 TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~--~~~~l~~~~~~~l~~~~~  184 (188)
                      ||+|+.++++.|+++||+.|.+++.|+...  +.+++...++..+++.+.
T Consensus       347 TG~Tl~~aa~~Lk~~GA~~V~~~~THglfs~~A~~rl~~s~i~~IvvTdT  396 (439)
T PTZ00145        347 TSGTLCEAAKQLKKHGARRVFAFATHGLFSGPAIERIEASPLEEVVVTDT  396 (439)
T ss_pred             cHHHHHHHHHHHHHcCCCEEEEEEEcccCChhHHHHHhcCCCCEEEEeCC
Confidence            999999999999999999999999998754  667777777888887776

>PRK07847 amidophosphoribosyltransferase; Provisional

Probab=99.49  E-value=2.6e-13  Score=120.11  Aligned_cols=117  Identities=21%  Similarity=0.208  Sum_probs=83.8

Q ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEeCCCChhhHHHHHHHhCCCeEE-EeecCCCCCcccchheeeeccceeEEEec-CCC
Q 029741           45 KAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVP-LRKPNKLPGEVISEAYVLEYGTDRLEMHV-GAI  122 (188)
Q Consensus        45 ~~~~~l~~~la~~~~~~~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~-~~k~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~  122 (188)
                      +....+++.|++... .+.|+|+++|.+|+++|..+|..+|+|+.. +.|++.....++...++.+....++.+.. ...
T Consensus       286 ~~R~~~G~~La~~~~-~~~D~VvpVP~sG~~~A~g~a~~~gip~~~~l~kn~~~grtfi~~~q~~r~~~~r~k~~~~~~~  364 (510)
T PRK07847        286 AARVEIGRRLAREHP-VEADLVIPVPESGTPAAVGYAQESGIPFGQGLVKNAYVGRTFIQPSQTIRQLGIRLKLNPLREV  364 (510)
T ss_pred             HHHHHHHHHHHhhCC-CCCeEEEeccCchHHHHHHHHHHhCCChhhceEeecccccCccCcchhhhhhceeeecCccccc
Confidence            666789999997664 368999999999999999999999999854 34443332222211111111111232211 223


Q ss_pred             CCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEe
Q 029741          123 EPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVV  162 (188)
Q Consensus       123 ~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~  162 (188)
                      .+||+||||||++|||+|+.++++.|+++|++.|.+..-.
T Consensus       365 ~~gk~vllVDD~ittG~T~~~~~~~L~~~ga~~v~~ri~s  404 (510)
T PRK07847        365 IRGKRLVVVDDSIVRGNTQRALVRMLREAGAAEVHVRISS  404 (510)
T ss_pred             cCCCEEEEEecccCchHHHHHHHHHHHHcCCCEEEEEECC
Confidence            5999999999999999999999999999999998876443

>PRK11595 DNA utilization protein GntX; Provisional

Probab=99.49  E-value=3.7e-13  Score=108.20  Aligned_cols=121  Identities=17%  Similarity=0.238  Sum_probs=77.6

Q ss_pred             cCHHHHHHHHHHHHHHHh------c-CCCcEEEEeC-------CCChhhHHHHH----HHhCCCeE--EEeecCCC-CCc
Q 029741           42 LDHKAFKDTVDIFVDRYR------D-MGISVVAGIE-------ARGFVFGPSIA----LAIGAKFV--PLRKPNKL-PGE  100 (188)
Q Consensus        42 ~~~~~~~~l~~~la~~~~------~-~~~d~Iv~v~-------~gG~~~a~~lA----~~l~~p~~--~~~k~~~~-~~~  100 (188)
                      .++.+.+.+++.+++.+.      . ..+|.|++||       .+|++++..+|    ..+++|+.  .+.+.+.. ...
T Consensus        85 ~~~~l~~~l~~~l~~~~~~~~~~~~~~~~d~ivpVPl~~~r~~~RGfnq~~~la~~la~~~~~~~~~~~l~r~~~~~~q~  164 (227)
T PRK11595         85 RRSELASVLARLLLLEWLQARRSTGLQKPDRIISVPLHQRRHWRRGFNQSDLLCRPLARWLGCDYDSEALTRTRATATQH  164 (227)
T ss_pred             ccHHHHHHHHHHHHHHHHHHhhhhcccCCCeEEecCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCcccceEEecCCCCcc
Confidence            467777778888765432      1 2578999998       35898765555    45677763  22222211 111


Q ss_pred             ccchheeeeccceeEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeC
Q 029741          101 VISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGL  164 (188)
Q Consensus       101 ~~~~~~~~~~~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~  164 (188)
                      ..+...+...-...+.+. + ..+|++|||||||+|||.|+.++++.|+++|+++|.+++++..
T Consensus       165 ~l~~~~R~~n~~~~f~~~-~-~~~~~~vllvDDv~tTG~Tl~~~~~~L~~~g~~~V~~~~la~~  226 (227)
T PRK11595        165 FLSARLRKRNLKNAFRLE-L-PVQGQHMAIVDDVVTTGSTVAEIAQLLLRNGAASVQVWCLCRT  226 (227)
T ss_pred             cCCHHHHhhhhhhhhccC-C-CCCCCEEEEEeeeecchHHHHHHHHHHHHcCCcEEEEEEEEec
Confidence            011101100001123322 2 2589999999999999999999999999999999999998753

>PRK07631 amidophosphoribosyltransferase; Provisional

Probab=99.49  E-value=8.9e-14  Score=122.15  Aligned_cols=117  Identities=21%  Similarity=0.216  Sum_probs=84.0

Q ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEeCCCChhhHHHHHHHhCCCeEE-EeecCCCCCcccchheeeec-c-ceeEEEecCC
Q 029741           45 KAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVP-LRKPNKLPGEVISEAYVLEY-G-TDRLEMHVGA  121 (188)
Q Consensus        45 ~~~~~l~~~la~~~~~~~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~-~~k~~~~~~~~~~~~~~~~~-~-~~~~~l~~~~  121 (188)
                      +....+++.||+... .+.|+|+++|..|..+|..+|..+|+|+.. +.|++....++...+...+. + +..+... ..
T Consensus       267 ~~R~~~G~~La~~~~-~~~D~VvpVP~s~~~~A~gla~~~gip~~~~lik~~~~~Rt~i~~~~~~R~~nv~~~f~~~-~~  344 (475)
T PRK07631        267 TARKNLGKRLALEAP-VEADVVTGVPDSSISAAIGYAEATGIPYELGLIKNRYVGRTFIQPSQALREQGVKMKLSPV-RG  344 (475)
T ss_pred             HHHHHHHHHHHhhCC-CCCcEEEEechhHHHHHHHHHHHHCCCcccceEEEecCCCCCcCCCHHHHHHHHhhhhhhc-cc
Confidence            566789999997664 368999999999999999999999999954 33333322222211111111 0 1123221 23


Q ss_pred             CCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEee
Q 029741          122 IEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVG  163 (188)
Q Consensus       122 ~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~  163 (188)
                      ..+||+|+||||++|||+|+.++++.|+++||+.|.+.+-..
T Consensus       345 ~v~gk~VlLVDDsittGtTl~~~~~~L~~aGA~eV~v~~~sP  386 (475)
T PRK07631        345 VVEGKRVVMVDDSIVRGTTSRRIVTMLREAGATEVHVRISSP  386 (475)
T ss_pred             ccCCceEEEEeeeeccHHHHHHHHHHHHHcCCCEEEEEEeCC
Confidence            468999999999999999999999999999999988776544

>COG0034 PurF Glutamine phosphoribosylpyrophosphate amidotransferase [Nucleotide transport and metabolism]

Probab=99.48  E-value=8.9e-14  Score=119.26  Aligned_cols=117  Identities=21%  Similarity=0.217  Sum_probs=90.8

Q ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEeCCCChhhHHHHHHHhCCCeEE-EeecCCCCCcccchheeeeccceeEEEec-CCC
Q 029741           45 KAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVP-LRKPNKLPGEVISEAYVLEYGTDRLEMHV-GAI  122 (188)
Q Consensus        45 ~~~~~l~~~la~~~~~~~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~-~~k~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~  122 (188)
                      +....+++.|++.... +.|+|+|+|.+|.+.|...|+++|+|+.. +.|++....+++..++..+...-+++++. ...
T Consensus       267 ~~R~~mG~~La~e~~~-eaDvVipVPDSg~~aAig~A~~sGiPy~~GliKNrYvgRTFI~P~q~~R~~~Vr~KLnpvr~~  345 (470)
T COG0034         267 EARKRMGEKLAEEIPV-EADVVIPVPDSGRPAAIGYARASGIPYEEGLIKNRYVGRTFIMPTQELREKGVRLKLNPVREV  345 (470)
T ss_pred             HHHHHHHHHHHHhCCc-cccEEEecCCCChHHHHHHHHHhCCchhhccccccccceeeeCCcHHHHHhhhhhhcCchHHH
Confidence            5667899999987753 67999999999999999999999999965 45666665555544333222222344432 234


Q ss_pred             CCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEe
Q 029741          123 EPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVV  162 (188)
Q Consensus       123 ~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~  162 (188)
                      .+||+|+||||.+-.|+|++..+++|+++||++|.+..-.
T Consensus       346 v~GKrVvlVDDSIVRGTTsr~IV~mlReAGAkEVHvrias  385 (470)
T COG0034         346 VKGKRVVLVDDSIVRGTTSRRIVQMLREAGAKEVHVRIAS  385 (470)
T ss_pred             hCCCeEEEEccccccCccHHHHHHHHHHhCCCEEEEEecC
Confidence            6999999999999999999999999999999999987544

>PLN02297 ribose-phosphate pyrophosphokinase

Probab=99.46  E-value=9.6e-13  Score=110.54  Aligned_cols=106  Identities=20%  Similarity=0.172  Sum_probs=81.5

Q ss_pred             CcEEEEeCCCChhhHHHHHHHhCCCeEEEeecCCCCCcccchheeeeccceeEEEecCCCCCCCEEEEEcCcccchHHHH
Q 029741           63 ISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLS  142 (188)
Q Consensus        63 ~d~Iv~v~~gG~~~a~~lA~~l~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~  142 (188)
                      ..+|++|+.||...+..++  +++|+.++.|.+.  +.            ...........+||+|+|||||++||+|+.
T Consensus       184 ~~vvVsPD~Ga~~ra~~~a--~~~~~~~~~K~R~--g~------------~~~~~~~~~dv~gr~vlIVDDIidTG~Tl~  247 (326)
T PLN02297        184 NIVIAFPDDGAWKRFHKQF--EHFPMVVCTKVRE--GD------------KRIVRIKEGNPAGRHVVIVDDLVQSGGTLI  247 (326)
T ss_pred             CcEEEecCccHHHHHHHHc--CCCCEEEEEeEEC--CC------------ceEEEecccccCCCeEEEEecccCcHHHHH
Confidence            3489999999999887776  5889998887662  11            111111122369999999999999999999


Q ss_pred             HHHHHHHHcCCeEEEEEEEeeChh--hhhccCC------CCeEEEEeccc
Q 029741          143 AAVRLLERMGAEVVECACVVGLPE--GQRRLDG------KPLYILVEPRL  184 (188)
Q Consensus       143 ~~~~~L~~~Ga~~v~v~~l~~~~~--~~~~l~~------~~~~~l~~~~~  184 (188)
                      .+++.|++.|++.+.+++.|....  +.+++..      .++..++..+.
T Consensus       248 ~aa~~L~~~Ga~~V~~~~THglfs~~a~~~l~~~~~~~~~~i~~iv~TdT  297 (326)
T PLN02297        248 ECQKVLAAHGAAKVSAYVTHGVFPNESWERFTHDNGGPEAGFAYFWITDS  297 (326)
T ss_pred             HHHHHHHHCCCcEEEEEEECcccChhHHHHHHhcccccccCcCEEEEcCC
Confidence            999999999999999999998754  5556653      36777777665

>PF14572 Pribosyl_synth: Phosphoribosyl synthetase-associated domain; PDB: 2H07_B 2H06_B 3S5J_B 2HCR_A 3EFH_A 2H08_A 1DKR_B 1DKU_B 1IBS_B 2JI4_A

Probab=99.43  E-value=7.3e-13  Score=102.27  Aligned_cols=119  Identities=22%  Similarity=0.299  Sum_probs=80.0

Q ss_pred             cEEEEeCCCChhhHHHHHHHhCCCeEEEeecCCCCCc---ccchhe------------eeec----cceeEEEecCCCCC
Q 029741           64 SVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGE---VISEAY------------VLEY----GTDRLEMHVGAIEP  124 (188)
Q Consensus        64 d~Iv~v~~gG~~~a~~lA~~l~~p~~~~~k~~~~~~~---~~~~~~------------~~~~----~~~~~~l~~~~~~~  124 (188)
                      -+||++..||...|+.+|+.|++.+..+.+.+.....   ....+.            ....    ....+.+ .++ .+
T Consensus         5 aVIVa~~~g~akRAts~Ad~L~l~~avih~e~~~~~~~~~~~~~s~p~~~~~~~~~~~~~~~~~~~e~~~~~v-VGD-V~   82 (184)
T PF14572_consen    5 AVIVAKDPGGAKRATSFADRLRLGFAVIHGERRDSESDGVDGRHSPPMSRSAAVSSSEEIPEMTPKEKPPMNV-VGD-VK   82 (184)
T ss_dssp             EEEEESSGGGHHHHHHHHHHCT-EEEEE------------------------------------------EEE-ES---T
T ss_pred             CEEEeCCCCchHhHHHHHHHhCCCeeEecCccccccccccccccCCCccccccccccchhhhcccCcccceEE-EEE-cc
Confidence            4899999999999999999999998887554321100   000000            0000    0001222 133 59


Q ss_pred             CCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChh--hhhccCCCCeEEEEeccc
Q 029741          125 GERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLDGKPLYILVEPRL  184 (188)
Q Consensus       125 Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~--~~~~l~~~~~~~l~~~~~  184 (188)
                      ||.++||||+++||.|+..+++.|++.||.+|++++.|+...  +.++|+..+++.++..+.
T Consensus        83 gk~~IIvDDiIdtg~Tl~~aA~~Lk~~GA~~V~~~aTHgvfs~~A~~~l~~s~Id~vvvTnT  144 (184)
T PF14572_consen   83 GKICIIVDDIIDTGGTLIKAAELLKERGAKKVYACATHGVFSGDAPERLEESPIDEVVVTNT  144 (184)
T ss_dssp             TSEEEEEEEEESSTHHHHHHHHHHHHTTESEEEEEEEEE---TTHHHHHHHSSESEEEEETT
T ss_pred             CCeEeeecccccchHHHHHHHHHHHHcCCCEEEEEEeCcccCchHHHHHhhcCCeEEEEecc
Confidence            999999999999999999999999999999999999999865  667787778988887765

...

>PRK00129 upp uracil phosphoribosyltransferase; Reviewed

Probab=99.24  E-value=1e-10  Score=92.97  Aligned_cols=146  Identities=19%  Similarity=0.190  Sum_probs=96.2

Q ss_pred             CCChhHHHHhhcccccCCCCCCCceEEechhhhcCHHHHHHHHHHHHHHHh------------------cCCCcEEEEeC
Q 029741            9 RGDPRLQGISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYR------------------DMGISVVAGIE   70 (188)
Q Consensus         9 ~~~~~~~~~~~~~r~~~~~~~~g~~~~d~~~ll~~~~~~~~l~~~la~~~~------------------~~~~d~Iv~v~   70 (188)
                      -+||.++.+-..+|+--.   +...|..     .--.+.+.++.+....+.                  +.+.-+++++.
T Consensus         7 ~~~p~~~~~lt~lRd~~t---~~~~fr~-----~~~rl~~~l~~eal~~l~~~~~~v~tp~g~~~g~~~~~~~~vvV~Il   78 (209)
T PRK00129          7 VDHPLIQHKLTLLRDKNT---STKRFRE-----LLEELGRLLAYEATRDLPLEEVEIETPLGKTTGKRIAGKKLVIVPIL   78 (209)
T ss_pred             cCCHHHHHHHHHHHCCCC---CHHHHHH-----HHHHHHHHHHHHHhcccceeEEEEECCCCcEEEEEecCCeEEEEEEe
Confidence            358999999999888754   1111111     122333344444333331                  00123788999


Q ss_pred             CCChhhHHHHHHHhC-CCeEEEeecCCCCCcccchheeeeccceeEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHH
Q 029741           71 ARGFVFGPSIALAIG-AKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLE  149 (188)
Q Consensus        71 ~gG~~~a~~lA~~l~-~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~  149 (188)
                      ++|.+++..++..++ .++.++...+.. ..         .+........+...+|++|||+||+++||+|+..+++.|+
T Consensus        79 rgG~~~~~~l~~~l~~~~~~~i~~~r~~-~t---------~~~~~~~~~lp~~i~~~~VllvDd~laTG~Tl~~ai~~L~  148 (209)
T PRK00129         79 RAGLGMVDGVLKLIPSARVGHIGLYRDE-ET---------LEPVEYYVKLPEDIDERTVIVVDPMLATGGSAIAAIDLLK  148 (209)
T ss_pred             CCCHHHHHHHHHhCCcCeeeeEEEEeCC-CC---------CCCEEEEeeCCCcCCCCEEEEECCcccchHHHHHHHHHHH
Confidence            999999999999997 455444332210 00         0111112222334589999999999999999999999999


Q ss_pred             HcCCeEEEEEEEeeChhhhhccC
Q 029741          150 RMGAEVVECACVVGLPEGQRRLD  172 (188)
Q Consensus       150 ~~Ga~~v~v~~l~~~~~~~~~l~  172 (188)
                      +.|++.+.+++++..+.+.+++.
T Consensus       149 ~~G~~~I~~~~ll~~~~gl~~l~  171 (209)
T PRK00129        149 KRGAKNIKVLCLVAAPEGIKALE  171 (209)
T ss_pred             HcCCCEEEEEEEecCHHHHHHHH
Confidence            99999999999999988777764

>KOG1448 consensus Ribose-phosphate pyrophosphokinase [Nucleotide transport and metabolism; Amino acid transport and metabolism]

Probab=99.24  E-value=4e-11  Score=97.95  Aligned_cols=120  Identities=25%  Similarity=0.298  Sum_probs=89.7

Q ss_pred             chhhhcCHHHHHHHHHHHHHHHhcCCCcEEEEeCCCChhhHHHHHHHhCCCeEEEeecCCCCCcccchheeeeccceeEE
Q 029741           37 ITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLE  116 (188)
Q Consensus        37 ~~~ll~~~~~~~~l~~~la~~~~~~~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~  116 (188)
                      +++++..|...+.+...    ..+.+.-+|++|..||...+..+|+.|+..+..+.|.+.-..++          ...+.
T Consensus       142 Vdnly~~p~~l~~ir~~----~~~~~~~vivSPdaGgaKR~~s~ad~l~~~fali~ker~k~~~v----------~~~m~  207 (316)
T KOG1448|consen  142 VDNLYAEPAVLNYIREN----IPDSENAVIVSPDAGGAKRVTSLADRLNLDFALIHKERRKANEV----------DIRMV  207 (316)
T ss_pred             chhhccchHHHHHHHhh----CCCccceEEECCCcchhhhhHHHHHhhcchhhhhhhhhhccccc----------ceEEE
Confidence            67777888665554443    44555558888999999999999999998777655443211100          01122


Q ss_pred             EecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChh--hhhccC
Q 029741          117 MHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLD  172 (188)
Q Consensus       117 l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~--~~~~l~  172 (188)
                      + .++ .+||.++||||+++|++|+..+++.|.+.||++|++++.|....  ..++++
T Consensus       208 L-VGD-v~gkvailVDDm~dt~GTl~~aa~~L~~~GA~kV~a~~THgVfs~~a~er~~  263 (316)
T KOG1448|consen  208 L-VGD-VKGKVAILVDDMADTCGTLIKAADKLLEHGAKKVYAIVTHGVFSGPAIERLN  263 (316)
T ss_pred             E-Eec-cCCcEEEEecccccccchHHHHHHHHHhcCCceEEEEEcceeccccHHHHhh
Confidence            2 244 59999999999999999999999999999999999999998755  666665

>COG1926 Predicted phosphoribosyltransferases [General function prediction only]

Probab=99.21  E-value=4.5e-10  Score=87.85  Aligned_cols=124  Identities=23%  Similarity=0.296  Sum_probs=82.3

Q ss_pred             HHHHHHHHHHhcC---CCcEEEEeCCCChhhHHHHHHHhCCCeEE--EeecCCCCCccc-----ch------he------
Q 029741           49 DTVDIFVDRYRDM---GISVVAGIEARGFVFGPSIALAIGAKFVP--LRKPNKLPGEVI-----SE------AY------  106 (188)
Q Consensus        49 ~l~~~la~~~~~~---~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~--~~k~~~~~~~~~-----~~------~~------  106 (188)
                      ..++.|++.+.+.   +.-+|.++++||++.|..+|..||.|+..  +||-.....+..     .+      ++      
T Consensus         9 dAGr~La~~l~~~~~~~~~iVlaLpRGGvpva~evA~~lga~ldvliVrKiG~P~n~E~aiGAvae~g~~v~n~~~~~~~   88 (220)
T COG1926           9 DAGRKLAQELAALRDLKDVIVLALPRGGVPVAFEVAQALGAPLDVLIVRKIGAPGNPELAIGAVAEGGDVVLNYDVVRSL   88 (220)
T ss_pred             HHHHHHHHHHHhhccCCCcEEEEecCCCchHHHHHHHHhCCCeeEEEEeecCCCCCchhceeeeccCCcEecchhhhhhc
Confidence            3444455444432   33378899999999999999999999843  465443211100     00      00      


Q ss_pred             eeec---------cceeEE-----EecC---CCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChhhhh
Q 029741          107 VLEY---------GTDRLE-----MHVG---AIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQR  169 (188)
Q Consensus       107 ~~~~---------~~~~~~-----l~~~---~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~~~~  169 (188)
                      ..+.         ...++.     ...+   ...+|++|+||||-+.||.||..+++.+++.+++.+.+++-+...+...
T Consensus        89 ~i~~~~i~~~~~~e~~El~rrr~~yr~~~~~~~~~g~~VIlVDDGiATGatm~aAi~~~r~~~~~~IviAVPV~p~~a~~  168 (220)
T COG1926          89 GIDDAYIEAAAARERKELLRRREAYRGGRPVPSLKGRTVILVDDGIATGATMKAAVRALRAKGPKEIVIAVPVAPEDAAA  168 (220)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCEEEEEeCCcchhHHHHHHHHHHHhcCCceEEEEcccCCHHHHH
Confidence            0000         000000     0111   1358999999999999999999999999999999999999998887666


Q ss_pred             ccC
Q 029741          170 RLD  172 (188)
Q Consensus       170 ~l~  172 (188)
                      .|.
T Consensus       169 ~l~  171 (220)
T COG1926         169 ELE  171 (220)
T ss_pred             HHH
Confidence            664

>TIGR01091 upp uracil phosphoribosyltransferase

Probab=99.20  E-value=2.2e-10  Score=90.95  Aligned_cols=145  Identities=19%  Similarity=0.149  Sum_probs=94.3

Q ss_pred             CChhHHHHhhcccccCCCCCCCceEEechhhhcCHHHHHHHHHHHHHHHhc------------------CCCcEEEEeCC
Q 029741           10 GDPRLQGISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRD------------------MGISVVAGIEA   71 (188)
Q Consensus        10 ~~~~~~~~~~~~r~~~~~~~~g~~~~d~~~ll~~~~~~~~l~~~la~~~~~------------------~~~d~Iv~v~~   71 (188)
                      .||.++++-..+|+.-.   ++..|..     .--.+.+.++.+....+.-                  .+.-+++++.+
T Consensus         6 ~~p~~~~~lt~lRd~~t---~~~~Fr~-----~~~rl~~~l~~ea~~~l~~~~~~v~tp~g~~~~~~~~~~~i~~V~ILr   77 (207)
T TIGR01091         6 EHPLIKHKLTLLRDKNT---DTKEFRE-----LLRELGRLLAYEATRDLELEEVEVETPLGETEGGRILGKKIVLVPILR   77 (207)
T ss_pred             CCHHHHHHHHHHHCCCC---CHHHHHH-----HHHHHHHHHHHHHhccCCceeEEEECCCCcEEEeEecCCcEEEEEEeC
Confidence            48999999888888754   1111211     1122333344433332210                  02247888999


Q ss_pred             CChhhHHHHHHHhC-CCeEEEeecCCCCCcccchheeeeccceeEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHH
Q 029741           72 RGFVFGPSIALAIG-AKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLER  150 (188)
Q Consensus        72 gG~~~a~~lA~~l~-~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~  150 (188)
                      +|.+++..++..+. .++.++...+.. ..         .+........+...+|++|||+||+++||+|+..+++.|++
T Consensus        78 gg~~~~~~l~~~l~~~~v~~i~~~r~~-~t---------~~~~~~~~~lp~~i~~~~VllvDd~laTG~Tl~~ai~~L~~  147 (207)
T TIGR01091        78 AGLGMVDGVLKLIPEAKVGHVGAYRNE-ET---------LKPVPYYSKLPEDIDERTVIVLDPMLATGGTMIAALDLLKK  147 (207)
T ss_pred             CcHHHHHHHHHhCCcCceeEEEEEeCC-CC---------CCCEEEEecCCCCCCCCEEEEECCCccchHHHHHHHHHHHH
Confidence            99999999999986 344444332210 00         01111122223346899999999999999999999999999


Q ss_pred             cCCeEEEEEEEeeChhhhhccC
Q 029741          151 MGAEVVECACVVGLPEGQRRLD  172 (188)
Q Consensus       151 ~Ga~~v~v~~l~~~~~~~~~l~  172 (188)
                      .|++.+.+++++..+.+.+++.
T Consensus       148 ~G~~~I~v~~ll~~~~gl~~l~  169 (207)
T TIGR01091       148 RGAKKIKVLSIVAAPEGIEAVE  169 (207)
T ss_pred             cCCCEEEEEEEecCHHHHHHHH
Confidence            9999999999999988777664

that includes uracil phosphoribosyltransferase, uridine kinases, and other, uncharacterized proteins.

>KOG0572 consensus Glutamine phosphoribosylpyrophosphate amidotransferase [Nucleotide transport and metabolism]

Probab=99.16  E-value=6.2e-11  Score=99.70  Aligned_cols=116  Identities=16%  Similarity=0.151  Sum_probs=84.6

Q ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEeCCCChhhHHHHHHHhCCCeEE-EeecCCCCCcccchheeeeccceeEEEec-CCC
Q 029741           45 KAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVP-LRKPNKLPGEVISEAYVLEYGTDRLEMHV-GAI  122 (188)
Q Consensus        45 ~~~~~l~~~la~~~~~~~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~-~~k~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~  122 (188)
                      ......++.||. ....+.|+|+++|.+|...|...|...|+|+.- +.|++....+++..+++.+...-..++.. ...
T Consensus       275 ~~R~~~G~~LA~-e~P~d~DvVi~VPdS~~~aAlgyA~~sG~py~e~l~rnrYvGRTFI~P~q~iR~~~V~~Kl~~l~~~  353 (474)
T KOG0572|consen  275 TVRLQCGEQLAT-EAPVDADVVIPVPDSGTTAALGYAAKSGLPYQEVLIRNRYVGRTFIEPNQRIRQLGVKKKLGPLRQN  353 (474)
T ss_pred             HHHHHHHhHhhh-cCCcccceEEecCCchhHHHHHHHHHhCCchhhhhhhcccccceecCccHHHHHhhhhhhcccchhh
Confidence            444567777765 333578999999999999999999999999954 34555555555544333222211222221 234


Q ss_pred             CCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEE
Q 029741          123 EPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACV  161 (188)
Q Consensus       123 ~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l  161 (188)
                      ..||+|+||||.|..|+|+..++++|+++||+.|.....
T Consensus       354 ~~GKrvvlVDDSIVRGtTs~~IVkmlreaGAkeVh~riA  392 (474)
T KOG0572|consen  354 FEGKRVVLVDDSIVRGTTSSPIVKMLREAGAKEVHIRIA  392 (474)
T ss_pred             cCCceEEEEecceeccCchHHHHHHHHHcCCcEEEEEec
Confidence            699999999999999999999999999999999987643

>COG2065 PyrR Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase [Nucleotide transport and metabolism]

Probab=99.15  E-value=8.1e-10  Score=83.17  Aligned_cols=120  Identities=22%  Similarity=0.309  Sum_probs=76.0

Q ss_pred             hcCHHHHHHHH----HHHHHHHhcCCCcEEEEeCCCChhhHHHHHHHhC------CCeEEEeecCCCCCcccchheeeec
Q 029741           41 LLDHKAFKDTV----DIFVDRYRDMGISVVAGIEARGFVFGPSIALAIG------AKFVPLRKPNKLPGEVISEAYVLEY  110 (188)
Q Consensus        41 l~~~~~~~~l~----~~la~~~~~~~~d~Iv~v~~gG~~~a~~lA~~l~------~p~~~~~k~~~~~~~~~~~~~~~~~  110 (188)
                      +.|++.++...    .++.++-...+--+++|+..+|+++|..++..++      +|+-.+--+      +++..++...
T Consensus         6 ild~~~i~RtitRia~eIiErnk~~~~~vlvGIktrGv~lA~rl~~~i~~~Eg~~vp~g~lDIt------~yRDDl~~~~   79 (179)
T COG2065           6 ILDEAAIRRTITRIAHEIIERNKGLDNLVLVGIKTRGVPLAERLAERIEELEGIEVPVGELDIT------LYRDDLTQKG   79 (179)
T ss_pred             eCCHHHHHHHHHHHHHHHHHHhCCCCceEEEeEecCCHHHHHHHHHHHHHHhCCCCCeeeEEeE------EeechhhhcC
Confidence            34555555444    4444443333333889999999999999999873      454322100      0000000000


Q ss_pred             -cceeEEE-ecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcC-CeEEEEEEEeeChh
Q 029741          111 -GTDRLEM-HVGAIEPGERALVIDDLVATGGTLSAAVRLLERMG-AEVVECACVVGLPE  166 (188)
Q Consensus       111 -~~~~~~l-~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~G-a~~v~v~~l~~~~~  166 (188)
                       ......- .......||+|+|||||+.||+|++++++.|...| +..+..+++++++.
T Consensus        80 ~~~p~~~~t~~~~di~~k~VILVDDVLytGRTIRAAldal~d~GRPa~I~LavLVDRGH  138 (179)
T COG2065          80 PLRPQAKTTILPFDITGKRVILVDDVLYTGRTIRAALDALVDYGRPAKIQLAVLVDRGH  138 (179)
T ss_pred             ccCCcccCccCcccccCCEEEEEeeecccCccHHHHHHHHHhcCCcceEEEEEEEcCCC
Confidence             0000000 00223689999999999999999999999999999 68899999999864

>KOG3367 consensus Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism]

Probab=99.06  E-value=2.2e-09  Score=81.40  Aligned_cols=141  Identities=17%  Similarity=0.243  Sum_probs=91.3

Q ss_pred             eEEechhhhcCHHHHHHHHHHHHHHHhcC---CCcEEEEeCCCChhhHHHHHHHhC-------CCe--EEEeecCCCCCc
Q 029741           33 MFQDITTLLLDHKAFKDTVDIFVDRYRDM---GISVVAGIEARGFVFGPSIALAIG-------AKF--VPLRKPNKLPGE  100 (188)
Q Consensus        33 ~~~d~~~ll~~~~~~~~l~~~la~~~~~~---~~d~Iv~v~~gG~~~a~~lA~~l~-------~p~--~~~~k~~~~~~~  100 (188)
                      .+-|+..++.-..++..-.+.||+.+.+.   .+-+++|+..||+.|-+.+-+.+.       .|+  .++|-+.     
T Consensus        28 y~~Dls~v~ip~gli~dr~~rlakDi~~~~g~~~i~~lcVlkG~ykF~adLve~l~n~~s~~~~pmtvDFIR~kS-----  102 (216)
T KOG3367|consen   28 YTGDLSGVVIPHGLIRDRVERLAKDIMKEIGNKPIIFLCVLKGGYKFFADLVERLKNRNSDRPLPMTVDFIRAKS-----  102 (216)
T ss_pred             ecccccccccccchhhhHHHHhhhhhhhccCCCceEEEEEecchhHHHHHHHHHHhhcccCCCcceeeeeeehhh-----
Confidence            34566666666666677777777666543   344789999999998777777753       333  1233221     


Q ss_pred             ccchheeeeccceeEEEec-CC--CCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChhhhhccCCCCeE
Q 029741          101 VISEAYVLEYGTDRLEMHV-GA--IEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQRRLDGKPLY  177 (188)
Q Consensus       101 ~~~~~~~~~~~~~~~~l~~-~~--~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~~~~~l~~~~~~  177 (188)
                           |.....+..+.+-. +.  ...||+|||||||++||+||..++..+++.+++.+.++++..++..+ ...--|-+
T Consensus       103 -----Y~n~~stg~iqiig~d~l~~ltgK~VliVeDIvdTGrTl~~Lls~~~~~k~~~v~vasLL~Krt~R-~v~yk~dy  176 (216)
T KOG3367|consen  103 -----YCNDQSTGDIQIIGGDDLSTLTGKNVLIVEDIVDTGRTLSTLLSHMKAYKPSMVKVASLLVKRTRR-SVGYKPDY  176 (216)
T ss_pred             -----hcCCcccCCceeecCCCHHHhcCCcEEEEEeeccccchHHHHHHHHHhcCccceeeeeeccccccc-ccCCCccc
Confidence                 11111112222211 11  25899999999999999999999999999999999999999887422 22212344


Q ss_pred             EEEeccc
Q 029741          178 ILVEPRL  184 (188)
Q Consensus       178 ~l~~~~~  184 (188)
                      +-+++++
T Consensus       177 ~gFEiPd  183 (216)
T KOG3367|consen  177 VGFEIPD  183 (216)
T ss_pred             ccccCCc
Confidence            4445444

>PF15609 PRTase_2: Phosphoribosyl transferase

Probab=98.99  E-value=1.5e-08  Score=78.57  Aligned_cols=155  Identities=17%  Similarity=0.237  Sum_probs=105.7

Q ss_pred             CCCCceEEechhhhc-----CHHHHHHHHHHHHHHHhcC--CCcEEEEeCCCChhhHHHHHHHhCCCeEEEeecC-CCCC
Q 029741           28 PIPGIMFQDITTLLL-----DHKAFKDTVDIFVDRYRDM--GISVVAGIEARGFVFGPSIALAIGAKFVPLRKPN-KLPG   99 (188)
Q Consensus        28 ~~~g~~~~d~~~ll~-----~~~~~~~l~~~la~~~~~~--~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~~~k~~-~~~~   99 (188)
                      |+.+++|  ++.+++     +|.........|+.++...  ++.+++|.++.+.-+++.+++.++-...|+..++ ..++
T Consensus        14 pKR~fLf--VSkVLGKHiPv~P~~~~~~~~~La~~~~~~~~~~~lvIGfAETATgLG~~V~~~~~~~~~ylhTTR~~v~~   91 (191)
T PF15609_consen   14 PKRAFLF--VSKVLGKHIPVRPSVMRDAGRLLAAQVPEALPGPVLVIGFAETATGLGHGVFDALGAACLYLHTTREPVPG   91 (191)
T ss_pred             CCceeEE--EecccCcccCCCHHHHHHHHHHHHHHHHHhCCCCeEEEEEhHHHHHHHHHHHHHhhhccceeeeccccCCC
Confidence            4556655  555554     8999999999999988764  6679999999999999999999985445555443 2333


Q ss_pred             cccchheeeeccce---eEEEec-CCCCCCCEEEEEcCcccchHHHHHHHHHHHHc-CCeEEEEEEEeeChh--hhh---
Q 029741          100 EVISEAYVLEYGTD---RLEMHV-GAIEPGERALVIDDLVATGGTLSAAVRLLERM-GAEVVECACVVGLPE--GQR---  169 (188)
Q Consensus       100 ~~~~~~~~~~~~~~---~~~l~~-~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~-Ga~~v~v~~l~~~~~--~~~---  169 (188)
                      ....-.|..++++.   .++... +.+...+.+++|||-+|||+|+..+++.|++. ..+.+.++++.+...  .+.   
T Consensus        92 ~~~~~~F~E~HSHAt~h~ly~~~~~~l~~~~~lVLVDDEiSTG~T~lnli~al~~~~p~~~yvvasL~d~~~~~~~~~~~  171 (191)
T PF15609_consen   92 VPPLLEFEEEHSHATDHLLYPPDPDLLRNARTLVLVDDEISTGNTFLNLIRALHAKYPRKRYVVASLLDWRSEEDRARFE  171 (191)
T ss_pred             CccceeeeccccccccceecCCChHHhcCCCCEEEEecCccchHHHHHHHHHHHHhCCCceEEEEEEeeCCCHHHHHHHH
Confidence            11112244444422   233221 12346779999999999999999999999875 457777888888743  222   


Q ss_pred             ccC---CCCeEEEEeccc
Q 029741          170 RLD---GKPLYILVEPRL  184 (188)
Q Consensus       170 ~l~---~~~~~~l~~~~~  184 (188)
                      .+.   |++++.+.-+.+
T Consensus       172 ~~~~~lgi~i~~vsL~~G  189 (191)
T PF15609_consen  172 ALAEELGIPIDVVSLLSG  189 (191)
T ss_pred             HHHHHcCCcEEEEEeecc
Confidence            222   788777665544

>PLN02541 uracil phosphoribosyltransferase

Probab=98.38  E-value=9.6e-06  Score=65.86  Aligned_cols=49  Identities=39%  Similarity=0.674  Sum_probs=43.9

Q ss_pred             CCCEEEEEcCcccchHHHHHHHHHHHHcCCe--EEEEEEEeeChhhhhccC
Q 029741          124 PGERALVIDDLVATGGTLSAAVRLLERMGAE--VVECACVVGLPEGQRRLD  172 (188)
Q Consensus       124 ~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~--~v~v~~l~~~~~~~~~l~  172 (188)
                      ++++|+|+||++.||+|+..+++.|++.|++  .+.+++++..++|.+++.
T Consensus       156 ~~~~VlllDpmLATGgS~~~ai~~L~~~Gv~~~~I~~v~~ias~~Gl~~i~  206 (244)
T PLN02541        156 EGSRVLVVDPMLATGGTIVAAIDELVSRGASVEQIRVVCAVAAPPALKKLS  206 (244)
T ss_pred             CCCEEEEECcchhhhHHHHHHHHHHHHcCCCcccEEEEEEEECHHHHHHHH
Confidence            5789999999999999999999999999987  788888988888776663

>COG0035 Upp Uracil phosphoribosyltransferase [Nucleotide transport and metabolism]

Probab=98.18  E-value=1.2e-05  Score=63.41  Aligned_cols=101  Identities=22%  Similarity=0.325  Sum_probs=71.2

Q ss_pred             EEEEeCCCChhhHHHHHHHhC-CCeEEE--eecCCCCCcccchheeeeccceeEEEe-cCCCCCCCEEEEEcCcccchHH
Q 029741           65 VVAGIEARGFVFGPSIALAIG-AKFVPL--RKPNKLPGEVISEAYVLEYGTDRLEMH-VGAIEPGERALVIDDLVATGGT  140 (188)
Q Consensus        65 ~Iv~v~~gG~~~a~~lA~~l~-~p~~~~--~k~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~Gk~VLIVDDvi~TG~T  140 (188)
                      ++|++.+.|..+...+...+- .+.-.+  .+....             .+...+.. .+...+++.|+|+|-++.||+|
T Consensus        73 ~~V~ILRAGl~m~~gl~~~~P~a~vG~ig~~Rdeet-------------~~p~~yy~KLP~~~~~~~viv~DPMLATG~s  139 (210)
T COG0035          73 VIVPILRAGLGMVEGLLKLIPSARVGHIGIYRDEET-------------LEPVLYYEKLPEDIDERTVIVLDPMLATGGS  139 (210)
T ss_pred             EEEEEeeccccHHHHHHHhCCcceEEEEEEEecCcc-------------CceehhHHhCCCcccCCeEEEECchhhccHh
Confidence            567888999999998888752 111111  111100             01111111 1334689999999999999999


Q ss_pred             HHHHHHHHHHc-CCeEEEEEEEeeChhhhhccC----CCCeEE
Q 029741          141 LSAAVRLLERM-GAEVVECACVVGLPEGQRRLD----GKPLYI  178 (188)
Q Consensus       141 l~~~~~~L~~~-Ga~~v~v~~l~~~~~~~~~l~----~~~~~~  178 (188)
                      +..+++.|++. |++++.+++++..+++.+++.    +++++.
T Consensus       140 ~i~ai~~L~~~G~~~~I~~v~~vAapeGi~~v~~~~p~v~I~t  182 (210)
T COG0035         140 AIAAIDLLKKRGGPKNIKVVSLVAAPEGIKAVEKAHPDVEIYT  182 (210)
T ss_pred             HHHHHHHHHHhCCCceEEEEEEEecHHHHHHHHHhCCCCeEEE
Confidence            99999999999 899999999999999777764    555554

>PF14681 UPRTase: Uracil phosphoribosyltransferase; PDB: 1V9S_B 1UPF_A 1UPU_D 1JLR_B 1BD4_A 1BD3_C 1JLS_D 1XTV_C 1XTU_H 3G6W_C

Probab=98.16  E-value=5.7e-05  Score=59.92  Aligned_cols=96  Identities=21%  Similarity=0.292  Sum_probs=68.0

Q ss_pred             cEEEEeCCCChhhHHHHHHHh-CCCeEEE--eecCCCCCcccchheeeeccceeEEE-ecCCCCCCCEEEEEcCcccchH
Q 029741           64 SVVAGIEARGFVFGPSIALAI-GAKFVPL--RKPNKLPGEVISEAYVLEYGTDRLEM-HVGAIEPGERALVIDDLVATGG  139 (188)
Q Consensus        64 d~Iv~v~~gG~~~a~~lA~~l-~~p~~~~--~k~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~Gk~VLIVDDvi~TG~  139 (188)
                      -++|++.++|..+...+...+ +.++..+  .+....             .+..++. ..+...++++|+|+|-++.||+
T Consensus        69 i~~V~IlRaG~~m~~~~~~~~p~a~~g~i~i~r~~~t-------------~~p~~~y~~LP~~i~~~~VillDpmlaTG~  135 (207)
T PF14681_consen   69 ICIVPILRAGLPMLEGFREVFPDARVGHIGIQRDEET-------------LEPVLYYNKLPEDIENRKVILLDPMLATGG  135 (207)
T ss_dssp             EEEEEETTTHHHHHHHHHHHSTTSEEEEEEEEEETTT-------------SSEEEEEEE--TTGTTSEEEEEESEESSSH
T ss_pred             EEEEEEeCCcHHHHHHHHHhCCCcceEEEEEEEcCCc-------------cceeeeHhhCCCCccCCEEEEEeccccchh
Confidence            378889999999998888876 3444332  221110             1111221 1233348999999999999999


Q ss_pred             HHHHHHHHHHHcCC--eEEEEEEEeeChhhhhccC
Q 029741          140 TLSAAVRLLERMGA--EVVECACVVGLPEGQRRLD  172 (188)
Q Consensus       140 Tl~~~~~~L~~~Ga--~~v~v~~l~~~~~~~~~l~  172 (188)
                      |+..+++.|++.|.  +.+.+++++..+++.+++.
T Consensus       136 s~~~ai~~L~~~G~~~~~I~~v~~ias~~Gl~~l~  170 (207)
T PF14681_consen  136 SAIAAIEILKEHGVPEENIIIVSVIASPEGLERLL  170 (207)
T ss_dssp             HHHHHHHHHHHTTG-GGEEEEEEEEEEHHHHHHHH
T ss_pred             hHHHHHHHHHHcCCCcceEEEEEEEecHHHHHHHH
Confidence            99999999999886  7888888888887666653

...

>KOG1503 consensus Phosphoribosylpyrophosphate synthetase-associated protein [Amino acid transport and metabolism; Nucleotide transport and metabolism]

Probab=97.99  E-value=0.0002  Score=57.67  Aligned_cols=141  Identities=19%  Similarity=0.195  Sum_probs=93.9

Q ss_pred             chhhhcCHHHHHHHHHHHHHHHhcCCCcEEEEeCCCChhhHHHHHHHhCCCeEEEeecCCC-----------CCcccchh
Q 029741           37 ITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKL-----------PGEVISEA  105 (188)
Q Consensus        37 ~~~ll~~~~~~~~l~~~la~~~~~~~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~~~k~~~~-----------~~~~~~~~  105 (188)
                      ++++-..|.++..+    .+.+.+.+..+||+-..+...-|+..|+.|...+..+.-+.+.           +..+...+
T Consensus       146 vdnlraspfllqyi----qe~ipdyrnavivaksp~~akka~syaerlrlglavihge~k~~e~d~~dgr~spp~~~~~t  221 (354)
T KOG1503|consen  146 VDNLRASPFLLQYI----QEEIPDYRNAVIVAKSPGVAKKAQSYAERLRLGLAVIHGEQKDTESDLVDGRHSPPPVVTAT  221 (354)
T ss_pred             ccccccCHHHHHHH----HHhCccccceEEEecCcchhhHHHhHHHHHhhceeEeeccccccccccccCCcCCCCccccc
Confidence            56666778665544    4456666667888888888889999999998777665322111           10111000


Q ss_pred             e--eee------ccceeEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChh--hhhccCCCC
Q 029741          106 Y--VLE------YGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLDGKP  175 (188)
Q Consensus       106 ~--~~~------~~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~--~~~~l~~~~  175 (188)
                      .  +.+      +.+..+.+. + ...|+-.++|||+++.-.+..++++.|++.||-++++.+.|+.-+  +-..++..|
T Consensus       222 ~~~~~~lp~~~~k~kppltvv-g-dvggriaimvddiiddvqsfvaaae~lkergaykiyv~athgllssdapr~lees~  299 (354)
T KOG1503|consen  222 THPSLELPAQISKEKPPLTVV-G-DVGGRIAIMVDDIIDDVQSFVAAAEVLKERGAYKIYVMATHGLLSSDAPRLLEESP  299 (354)
T ss_pred             cCccccCchhhcccCCCeEEE-e-ccCceEEEEehhhHHhHHHHHHHHHHHHhcCceEEEEEeecccccccchhhhhcCC
Confidence            0  000      001112221 2 258999999999999999999999999999999999999999754  444566777


Q ss_pred             eEEEEecc
Q 029741          176 LYILVEPR  183 (188)
Q Consensus       176 ~~~l~~~~  183 (188)
                      ++.++-..
T Consensus       300 idevvvtn  307 (354)
T KOG1503|consen  300 IDEVVVTN  307 (354)
T ss_pred             CceEEEec
Confidence            77776543

>PF15610 PRTase_3: PRTase ComF-like

Probab=96.17  E-value=0.1  Score=42.91  Aligned_cols=39  Identities=21%  Similarity=0.256  Sum_probs=34.1

Q ss_pred             CCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEE
Q 029741          123 EPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACV  161 (188)
Q Consensus       123 ~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l  161 (188)
                      .+||.+|++|||-.||++=..+.+.+++.|++....+..
T Consensus       136 l~gk~lIflDDIkITGshE~~V~~~~~~~~~~~~~~yly  174 (274)
T PF15610_consen  136 LSGKHLIFLDDIKITGSHEDKVRKILKEYGLENDFIYLY  174 (274)
T ss_pred             hCCcEEEEeccEEecCcHHHHHHHHHHHcCccccEEEEE
Confidence            599999999999999999999999999999877444433

>KOG1017 consensus Predicted uracil phosphoribosyltransferase [General function prediction only]

Probab=93.89  E-value=0.35  Score=38.15  Aligned_cols=63  Identities=19%  Similarity=0.327  Sum_probs=46.7

Q ss_pred             CCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCC--eEEEEEEEeeChhhhhcc-CCCCeEEEEec
Q 029741          120 GAIEPGERALVIDDLVATGGTLSAAVRLLERMGA--EVVECACVVGLPEGQRRL-DGKPLYILVEP  182 (188)
Q Consensus       120 ~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga--~~v~v~~l~~~~~~~~~l-~~~~~~~l~~~  182 (188)
                      ....--++||+.=-++.||+|+..+++.|+++|.  ..+....++-.+-+.+.+ +..|-..+++-
T Consensus       184 ppDI~sR~VLLmYPi~stGnTV~~Av~VL~EhgVp~s~IiL~sLF~tP~gak~i~~~fP~itilts  249 (267)
T KOG1017|consen  184 PPDITSRRVLLMYPIISTGNTVCKAVEVLKEHGVPDSNIILVSLFITPTGAKNITRKFPYITILTS  249 (267)
T ss_pred             CCcccceeEEEEeeeecCCccHHHHHHHHHHcCCCcccEEEEEeeecchhhHHHHHhCCeEEEEee
Confidence            3345788999999999999999999999999996  456666777666644443 34555555543

>PF13793 Pribosyltran_N: N-terminal domain of ribose phosphate pyrophosphokinase; PDB: 2JI4_A 1DKU_B 1IBS_B 1DKR_B 3MBI_C 3LRT_B 3LPN_B 3NAG_B 2H07_B 2H06_B

Probab=93.82  E-value=1.8  Score=31.14  Aligned_cols=76  Identities=16%  Similarity=0.183  Sum_probs=45.0

Q ss_pred             CCChhhHHHHHHHhCCCeEEEeecCCCCCcccchheeeeccceeEEEecCCCCCCCEEEEEcCcccc--hH--HHHHHHH
Q 029741           71 ARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVAT--GG--TLSAAVR  146 (188)
Q Consensus        71 ~gG~~~a~~lA~~l~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gk~VLIVDDvi~T--G~--Tl~~~~~  146 (188)
                      .+.-.+|..+|..||.+...+.-.+..            .|+..+.+  ....+|++|+||-+....  -.  -+.-+++
T Consensus         7 ~~~~~La~~ia~~L~~~~~~~~~~~F~------------dGE~~v~i--~~~v~g~dv~iiqs~~~~~nd~lmeLll~i~   72 (116)
T PF13793_consen    7 SSSQDLAERIAEALGIPLGKVETKRFP------------DGETYVRI--PESVRGKDVFIIQSTSPPVNDNLMELLLLID   72 (116)
T ss_dssp             SSGHHHHHHHHHHTTS-EE-EEEEE-T------------TS-EEEEE--SS--TTSEEEEE---SSSHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHhCCceeeeEEEEcC------------CCCEEEEe--cccccCCceEEEEecCCchhHHHHHHHHHHH
Confidence            344689999999999988664332221            22222333  334689999999988875  22  3455678


Q ss_pred             HHHHcCCeEEEEEE
Q 029741          147 LLERMGAEVVECAC  160 (188)
Q Consensus       147 ~L~~~Ga~~v~v~~  160 (188)
                      .++.+||+.|.++.
T Consensus        73 a~r~~~a~~i~~Vi   86 (116)
T PF13793_consen   73 ALRRAGAKRITLVI   86 (116)
T ss_dssp             HHHHTTBSEEEEEE
T ss_pred             HHHHcCCcEEEEec
Confidence            88889998876654

...

>KOG1377 consensus Uridine 5'- monophosphate synthase/orotate phosphoribosyltransferase [Nucleotide transport and metabolism]

Probab=92.47  E-value=0.72  Score=37.54  Aligned_cols=145  Identities=15%  Similarity=0.134  Sum_probs=80.9

Q ss_pred             CCceEEechhhhcCHHHHHHHHHHHHHHHhcC--CCcE--EEEeCCCC-hhhHHHHHHHhCCCeEEEeecCCCCCcccch
Q 029741           30 PGIMFQDITTLLLDHKAFKDTVDIFVDRYRDM--GISV--VAGIEARG-FVFGPSIALAIGAKFVPLRKPNKLPGEVISE  104 (188)
Q Consensus        30 ~g~~~~d~~~ll~~~~~~~~l~~~la~~~~~~--~~d~--Iv~v~~gG-~~~a~~lA~~l~~p~~~~~k~~~~~~~~~~~  104 (188)
                      +...|.|+.. ...+..+..+++.++..+-..  .+|+  +++++..| ...+...|+..+++.+.-+...+   -+-+.
T Consensus        61 h~di~~df~~-~~~~k~L~aLA~a~~f~I~edrkffDigntvg~qY~gg~~kia~wadl~n~h~v~g~~i~~---g~~rk  136 (261)
T KOG1377|consen   61 HSDIFFDFSL-FNSGKDLRALAQAYAFLIFEDRKFFDIGNTVGLQYKGGPLKIASWADLVNAHGVPGRGIIK---GLNRK  136 (261)
T ss_pred             cCceeecccc-cccHHHHHHHHHHHHHHHHhhhhcccccceeccccccchHHHHHHHHHHhccCcccchHHH---HHhhh
Confidence            3456666655 347888889999988777433  5888  99999877 44556667777765443210000   00000


Q ss_pred             heeeecc-ceeEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChh-----------hhhccC
Q 029741          105 AYVLEYG-TDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE-----------GQRRLD  172 (188)
Q Consensus       105 ~~~~~~~-~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~-----------~~~~l~  172 (188)
                       .-...+ ..-+.+   ...++|.+|+.||+.++|.-+++.  .+.-.-..+.+..+..++.+           +.+.|.
T Consensus       137 -~~k~~~egG~lll---Aems~kg~L~~~dy~ea~~aI~ee--~~d~~~G~v~g~~~~ldrq~l~~tpgv~~d~~~d~lg  210 (261)
T KOG1377|consen  137 -LLKDHGEGGVLLL---AELSSKGSLITGDYTEAATAIAEE--DIDFVNGFVAGSIVALDRQELIMTPGVELDAAGDNLG  210 (261)
T ss_pred             -ccccCCCCceEEE---EEeccCCceeehhHHHHHHHHHHh--hhchheeEEeeeeeeccHHhhccCCCCccchhhcchh
Confidence             000011 111221   124788999999988887777776  33333445555555555441           212232


Q ss_pred             ---CCCeEEEEeccc
Q 029741          173 ---GKPLYILVEPRL  184 (188)
Q Consensus       173 ---~~~~~~l~~~~~  184 (188)
                         +.|.+++.++..
T Consensus       211 qqy~~p~e~I~~~~~  225 (261)
T KOG1377|consen  211 QQYRLPVEVIVSLGS  225 (261)
T ss_pred             hhhcCcHHhheecCc
Confidence               667777775544

>PRK02812 ribose-phosphate pyrophosphokinase; Provisional

Probab=91.45  E-value=3.7  Score=34.95  Aligned_cols=83  Identities=14%  Similarity=0.114  Sum_probs=53.0

Q ss_pred             EEEeCCCChhhHHHHHHHhCCCeEEEeecCCCCCcccchheeeeccceeEEEecCCCCCCCEEEEEcCcccc-hHH---H
Q 029741           66 VAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVAT-GGT---L  141 (188)
Q Consensus        66 Iv~v~~gG~~~a~~lA~~l~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gk~VLIVDDvi~T-G~T---l  141 (188)
                      ++-...+.-.+|..+|..||++...+..++..++            +  .++......+|++|+||-..... ...   +
T Consensus        23 ~i~~g~~~~~la~~ia~~lg~~l~~~~~~~FpDG------------E--~~v~i~~~vrg~~V~ivqs~~~p~nd~l~eL   88 (330)
T PRK02812         23 RLFSGSSNPALAQEVARYLGMDLGPMIRKRFADG------------E--LYVQIQESIRGCDVYLIQPTCAPVNDHLMEL   88 (330)
T ss_pred             EEEECCCCHHHHHHHHHHhCCCceeeEEEECCCC------------C--EEEEeCCCCCCCEEEEECCCCCCccHHHHHH
Confidence            3333456678999999999998765443332222            2  22222333589999999985433 222   4


Q ss_pred             HHHHHHHHHcCCeEEEEEEEe
Q 029741          142 SAAVRLLERMGAEVVECACVV  162 (188)
Q Consensus       142 ~~~~~~L~~~Ga~~v~v~~l~  162 (188)
                      ..+++.++.+|++.+.++.-.
T Consensus        89 ll~~~alr~~ga~ri~~ViPY  109 (330)
T PRK02812         89 LIMVDACRRASARQITAVIPY  109 (330)
T ss_pred             HHHHHHHHHhCCceEEEEEec
Confidence            556778889999987765544

>PTZ00145 phosphoribosylpyrophosphate synthetase; Provisional

Probab=90.66  E-value=4.5  Score=35.79  Aligned_cols=84  Identities=13%  Similarity=0.106  Sum_probs=52.0

Q ss_pred             EEEEeCCCChhhHHHHHHHhCCCeEEEeecCCCCCcccchheeeeccceeEEEecCCCCCCCEEEEEcCcccc-hH---H
Q 029741           65 VVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVAT-GG---T  140 (188)
Q Consensus        65 ~Iv~v~~gG~~~a~~lA~~l~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gk~VLIVDDvi~T-G~---T  140 (188)
                      .++-...+.-.+|..||..||+++..+..++..+++              +++.......|+.|+||-..-.. -.   -
T Consensus       120 m~I~sgs~~~~LA~~IA~~Lg~~l~~~~~~rFpDGE--------------~~Vri~e~VrG~dV~IVqS~~~pvNd~LmE  185 (439)
T PTZ00145        120 AILFSGSSNPLLSKNIADHLGTILGRVHLKRFADGE--------------VSMQFLESIRGKDVYIIQPTCPPVNENLIE  185 (439)
T ss_pred             eEEEECCCCHHHHHHHHHHhCCCceeeEEEECCCCC--------------EEEEECCCcCCCeEEEEecCCCCCcHHHHH
Confidence            344444556789999999999987665433322222              22222233589999998875432 11   2


Q ss_pred             HHHHHHHHHHcCCeEEEEEEEe
Q 029741          141 LSAAVRLLERMGAEVVECACVV  162 (188)
Q Consensus       141 l~~~~~~L~~~Ga~~v~v~~l~  162 (188)
                      +.-+++.++.+||+.|.++...
T Consensus       186 LLllidAlr~agAkrItlViPY  207 (439)
T PTZ00145        186 LLLMISTCRRASAKKITAVIPY  207 (439)
T ss_pred             HHHHHHHHHHhccCeEEEEeec
Confidence            3445677788899887766544

>PRK07199 phosphoribosylpyrophosphate synthetase; Provisional

Probab=89.96  E-value=6.5  Score=32.96  Aligned_cols=78  Identities=14%  Similarity=0.119  Sum_probs=50.2

Q ss_pred             CCChhhHHHHHHHhCCCeEEEeecCCCCCcccchheeeeccceeEEEecCCCCCCCEEEEEcCcccchH---HHHHHHHH
Q 029741           71 ARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGG---TLSAAVRL  147 (188)
Q Consensus        71 ~gG~~~a~~lA~~l~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~---Tl~~~~~~  147 (188)
                      .+.-.+|..+|..||+|+..+...+..+            |+..+.+  ....+|+.|+||-.....-.   -+.-+++.
T Consensus         9 ~~~~~la~~ia~~lg~~~~~~~~~~F~d------------GE~~v~i--~~~v~g~~V~ivqs~~~~n~~l~elll~~~a   74 (301)
T PRK07199          9 PGNEAAAGRLAAALGVEVGRIELHRFPD------------GESYVRL--DSPVAGRTVVLVCSLDRPDEKLLPLLFAAEA   74 (301)
T ss_pred             CCCHHHHHHHHHHhCCceeeeEEEECCC------------CCEEEEE--CCCCCCCEEEEECCCCCCcHHHHHHHHHHHH
Confidence            4456899999999999986554333222            2222333  23358999999988654222   24456677


Q ss_pred             HHHcCCeEEEEEEEe
Q 029741          148 LERMGAEVVECACVV  162 (188)
Q Consensus       148 L~~~Ga~~v~v~~l~  162 (188)
                      |+++||+.+.++...
T Consensus        75 lr~~~a~~i~~ViPY   89 (301)
T PRK07199         75 ARELGARRVGLVAPY   89 (301)
T ss_pred             HHHcCCCeEEEEeec
Confidence            889999887765443

>PRK04923 ribose-phosphate pyrophosphokinase; Provisional

Probab=89.73  E-value=4.2  Score=34.43  Aligned_cols=78  Identities=18%  Similarity=0.165  Sum_probs=45.9

Q ss_pred             CCCChhhHHHHHHHhCCCeEEEeecCCCCCcccchheeeeccceeEEEecCCCCCCCEEEEEcCcccchH----HHHHHH
Q 029741           70 EARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGG----TLSAAV  145 (188)
Q Consensus        70 ~~gG~~~a~~lA~~l~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~----Tl~~~~  145 (188)
                      ..+.-.+|..+|..||.|+..+..++..+++            ..+.+  .....|++|+||-+.-....    -+..++
T Consensus        12 g~~~~~La~~ia~~lg~~l~~~~~~~FpdGE------------~~v~i--~~~v~g~~V~iiqs~~~p~nd~lmeLl~~~   77 (319)
T PRK04923         12 GNANKPLAQSICKELGVRMGKALVTRFSDGE------------VQVEI--EESVRRQEVFVIQPTCAPSAENLMELLVLI   77 (319)
T ss_pred             CCCCHHHHHHHHHHhCCceeeeEEEECCCCC------------EEEEE--CCCcCCCeEEEEecCCCCCchHHHHHHHHH
Confidence            3445689999999999997655433322222            12222  23347888888855332211    234456


Q ss_pred             HHHHHcCCeEEEEEEE
Q 029741          146 RLLERMGAEVVECACV  161 (188)
Q Consensus       146 ~~L~~~Ga~~v~v~~l  161 (188)
                      +.++.+|++.+.++..
T Consensus        78 ~alr~~~a~~i~~ViP   93 (319)
T PRK04923         78 DALKRASAASVTAVIP   93 (319)
T ss_pred             HHHHHcCCcEEEEEee
Confidence            6777888877665443

>PRK00553 ribose-phosphate pyrophosphokinase; Provisional

Probab=89.64  E-value=7  Score=33.30  Aligned_cols=83  Identities=13%  Similarity=0.061  Sum_probs=51.4

Q ss_pred             EEEeCCCChhhHHHHHHHhCCCeEEEeecCCCCCcccchheeeeccceeEEEecCCCCCCCEEEEEcCcccc-hHH---H
Q 029741           66 VAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVAT-GGT---L  141 (188)
Q Consensus        66 Iv~v~~gG~~~a~~lA~~l~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gk~VLIVDDvi~T-G~T---l  141 (188)
                      ++-...+.-.+|..+|..||+|...+..++..+++              .++......+|+.|+||-+.... -..   +
T Consensus        11 ~i~~~~~~~~La~~ia~~lg~~l~~~~~~~FpdGE--------------~~v~i~~~vrg~dV~ivqs~~~p~nd~l~eL   76 (332)
T PRK00553         11 VIFSLSKAKKLVDSICRKLSMKPGEIVIQKFADGE--------------TYIRFDESVRNKDVVIFQSTCSPVNDSLMEL   76 (332)
T ss_pred             EEEECCCCHHHHHHHHHHhCCceeeeEEEECCCCC--------------EEEEECCCCCCCEEEEEcCCCCCCchHHHHH
Confidence            33334455689999999999988665433322222              22222233589999999876432 112   4


Q ss_pred             HHHHHHHHHcCCeEEEEEEEe
Q 029741          142 SAAVRLLERMGAEVVECACVV  162 (188)
Q Consensus       142 ~~~~~~L~~~Ga~~v~v~~l~  162 (188)
                      ..++..++.+||+.+.++...
T Consensus        77 ll~~~alr~~~a~~i~~ViPY   97 (332)
T PRK00553         77 LIAIDALKRGSAKSITAILPY   97 (332)
T ss_pred             HHHHHHHHHcCCCeEEEEeec
Confidence            456677788899877665544

>PRK01259 ribose-phosphate pyrophosphokinase; Provisional

Probab=89.59  E-value=6.3  Score=33.17  Aligned_cols=78  Identities=14%  Similarity=0.148  Sum_probs=48.8

Q ss_pred             CCChhhHHHHHHHhCCCeEEEeecCCCCCcccchheeeeccceeEEEecCCCCCCCEEEEEcCcccc-hHH---HHHHHH
Q 029741           71 ARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVAT-GGT---LSAAVR  146 (188)
Q Consensus        71 ~gG~~~a~~lA~~l~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gk~VLIVDDvi~T-G~T---l~~~~~  146 (188)
                      .+.-.+|..+|..||.|...+..++..++            +  .++.......|++|+||-+.-.. -..   +..+++
T Consensus         7 ~~~~~la~~ia~~lg~~~~~~~~~~FpdG------------E--~~vri~~~v~g~~V~ii~s~~~~~nd~l~eLll~~~   72 (309)
T PRK01259          7 NANPELAEKIAKYLGIPLGKASVGRFSDG------------E--ISVEINENVRGKDVFIIQSTCAPTNDNLMELLIMID   72 (309)
T ss_pred             CCCHHHHHHHHHHhCCceeeeEEEECCCC------------C--EEEEeCCCCCCCEEEEECCCCCCCcHHHHHHHHHHH
Confidence            44468999999999998765433322222            2  22222333589999999765322 122   456677


Q ss_pred             HHHHcCCeEEEEEEEe
Q 029741          147 LLERMGAEVVECACVV  162 (188)
Q Consensus       147 ~L~~~Ga~~v~v~~l~  162 (188)
                      .++++|++.+.++...
T Consensus        73 alr~~ga~~i~lViPY   88 (309)
T PRK01259         73 ALKRASAGRITAVIPY   88 (309)
T ss_pred             HHHHcCCceEEEEeec
Confidence            8889999877655443

>TIGR01251 ribP_PPkin ribose-phosphate pyrophosphokinase

Probab=89.32  E-value=4.2  Score=34.13  Aligned_cols=78  Identities=13%  Similarity=0.154  Sum_probs=47.5

Q ss_pred             CCChhhHHHHHHHhCCCeEEEeecCCCCCcccchheeeeccceeEEEecCCCCCCCEEEEE-cCcccc-hH---HHHHHH
Q 029741           71 ARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVI-DDLVAT-GG---TLSAAV  145 (188)
Q Consensus        71 ~gG~~~a~~lA~~l~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gk~VLIV-DDvi~T-G~---Tl~~~~  145 (188)
                      .+.-.+|..+|..||.|...+..++-.++            +..+.+  .....|+.|+|| -..... -.   -+..++
T Consensus         7 ~~~~~la~~ia~~lg~~~~~~~~~~FpdG------------E~~v~i--~~~v~g~~v~iv~~s~~~~~~~~l~el~~~~   72 (308)
T TIGR01251         7 SSNQELAQKVAKNLGLPLGDVEVKRFPDG------------ELYVRI--NESVRGKDVFIIQQSTSAPVNDNLMELLIMI   72 (308)
T ss_pred             CCCHHHHHHHHHHhCCeeeeeEEEECCCC------------CEEEEE--CCCCCCCeEEEEeCCCCCCccHHHHHHHHHH
Confidence            34468999999999998876543332222            212222  233588999888 543311 11   245667


Q ss_pred             HHHHHcCCeEEEEEEEe
Q 029741          146 RLLERMGAEVVECACVV  162 (188)
Q Consensus       146 ~~L~~~Ga~~v~v~~l~  162 (188)
                      +.++.+|++.+.++.-.
T Consensus        73 ~a~r~~ga~~i~~v~PY   89 (308)
T TIGR01251        73 DALKRASAKSITAVIPY   89 (308)
T ss_pred             HHHHHcCCCeEEEEEEe
Confidence            78888999877655443

In some systems, close homologs lacking enzymatic activity exist and perform regulatory functions. The model is designated subfamily rather than equivalog for this reason.

>PRK02269 ribose-phosphate pyrophosphokinase; Provisional

Probab=88.93  E-value=8.4  Score=32.59  Aligned_cols=79  Identities=13%  Similarity=0.109  Sum_probs=50.0

Q ss_pred             CCCChhhHHHHHHHhCCCeEEEeecCCCCCcccchheeeeccceeEEEecCCCCCCCEEEEEcCcccc----hHHHHHHH
Q 029741           70 EARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVAT----GGTLSAAV  145 (188)
Q Consensus        70 ~~gG~~~a~~lA~~l~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gk~VLIVDDvi~T----G~Tl~~~~  145 (188)
                      ..+.-.+|..+|..||+++..+..++..++            +..+.+  ....+|+.|+||-.....    =--+.-++
T Consensus        11 ~~~~~~la~~ia~~lg~~l~~~~~~~FpdG------------E~~v~i--~~~vrg~dV~iv~s~~~~~nd~lmelll~~   76 (320)
T PRK02269         11 LSSNKELAEKVAQEIGIELGKSSVRQFSDG------------EIQVNI--EESIRGHHVFILQSTSSPVNDNLMEILIMV   76 (320)
T ss_pred             CCCCHHHHHHHHHHhCCceeeeEEEECCCC------------CEEEEE--CCCCCCCEEEEEecCCCCccchHHHHHHHH
Confidence            344468999999999998765543332222            212222  233589999999775431    12255667


Q ss_pred             HHHHHcCCeEEEEEEEe
Q 029741          146 RLLERMGAEVVECACVV  162 (188)
Q Consensus       146 ~~L~~~Ga~~v~v~~l~  162 (188)
                      +.|+.+||+.+.++...
T Consensus        77 ~alr~~~a~~i~~V~PY   93 (320)
T PRK02269         77 DALKRASAESINVVMPY   93 (320)
T ss_pred             HHHHHhCCCeEEEEEec
Confidence            88889999887665544

>PRK00934 ribose-phosphate pyrophosphokinase; Provisional

Probab=88.83  E-value=6.3  Score=32.72  Aligned_cols=77  Identities=12%  Similarity=0.127  Sum_probs=48.7

Q ss_pred             CCChhhHHHHHHHhCCCeEEEeecCCCCCcccchheeeeccceeEEEecCCCCCCCEEEEEcCcccchH---HHHHHHHH
Q 029741           71 ARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGG---TLSAAVRL  147 (188)
Q Consensus        71 ~gG~~~a~~lA~~l~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~---Tl~~~~~~  147 (188)
                      .+.-.+|..+|..||+|+..+..++..++            +..+.+  ....+|++|+|+-..-.-..   -+..+++.
T Consensus         6 ~~~~~la~~ia~~l~~~~~~~~~~~FpdG------------E~~v~i--~~~v~g~~v~i~~~~~~~~d~l~ell~~~~a   71 (285)
T PRK00934          6 SASQLLASEVARLLNTELALVETKRFPDG------------ELYVRI--LGEIDGEDVVIISTTYPQDENLVELLLLIDA   71 (285)
T ss_pred             CCCHHHHHHHHHHHCCceEeeEEEECCCC------------CEEEEE--CCCcCCCEEEEEeCCCCCcHHHHHHHHHHHH
Confidence            34458999999999999876544432222            222333  23358999988876433222   24456778


Q ss_pred             HHHcCCeEEEEEEE
Q 029741          148 LERMGAEVVECACV  161 (188)
Q Consensus       148 L~~~Ga~~v~v~~l  161 (188)
                      ++.+|++.+.++..
T Consensus        72 lr~~ga~~i~~v~P   85 (285)
T PRK00934         72 LRDEGAKSITLVIP   85 (285)
T ss_pred             HHHcCCCeEEEEec
Confidence            88999988765543

>PLN02369 ribose-phosphate pyrophosphokinase

Probab=88.47  E-value=5.6  Score=33.36  Aligned_cols=74  Identities=12%  Similarity=0.126  Sum_probs=46.5

Q ss_pred             hhHHHHHHHhCCCeEEEeecCCCCCcccchheeeeccceeEEEecCCCCCCCEEEEEcCcccc--hHH--HHHHHHHHHH
Q 029741           75 VFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVAT--GGT--LSAAVRLLER  150 (188)
Q Consensus        75 ~~a~~lA~~l~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gk~VLIVDDvi~T--G~T--l~~~~~~L~~  150 (188)
                      .+|..+|..||+|+..+..++..+++            ..+.+  ....+|++|+||-.....  -..  +..+++.+++
T Consensus         2 ~lA~~ia~~lg~~l~~~~~~~FpdGE------------~~v~i--~~~v~g~~V~iv~s~~~p~nd~l~eLl~~~~a~r~   67 (302)
T PLN02369          2 ALSQEIACYLGLELGKITIKRFADGE------------IYVQL--QESVRGCDVFLVQPTCPPANENLMELLIMIDACRR   67 (302)
T ss_pred             hHHHHHHHHhCCceeeeEEEECCCCC------------EEEEE--CCCCCCCeEEEEecCCCCcchHHHHHHHHHHHHHH
Confidence            47899999999988665433322222            22222  233589999999886522  122  4556778889


Q ss_pred             cCCeEEEEEEEe
Q 029741          151 MGAEVVECACVV  162 (188)
Q Consensus       151 ~Ga~~v~v~~l~  162 (188)
                      +|++.+.++...
T Consensus        68 ~~a~~i~~ViPY   79 (302)
T PLN02369         68 ASAKRITAVIPY   79 (302)
T ss_pred             cCCCeEEEEeec
Confidence            999877655443

>PRK03092 ribose-phosphate pyrophosphokinase; Provisional

Probab=86.73  E-value=7.2  Score=32.76  Aligned_cols=73  Identities=16%  Similarity=0.195  Sum_probs=46.1

Q ss_pred             hHHHHHHHhCCCeEEEeecCCCCCcccchheeeeccceeEEEecCCCCCCCEEEEEcCcccc-hHH---HHHHHHHHHHc
Q 029741           76 FGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVAT-GGT---LSAAVRLLERM  151 (188)
Q Consensus        76 ~a~~lA~~l~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gk~VLIVDDvi~T-G~T---l~~~~~~L~~~  151 (188)
                      +|..+|..||+++..+..++..+++              +++......+|++|+||--.... ...   +.-++..++++
T Consensus         1 la~~ia~~l~~~l~~~~~~~F~DGE--------------~~vri~~~v~g~~v~ii~s~~~p~nd~l~ell~~~~a~r~~   66 (304)
T PRK03092          1 LAEEVAKELGVEVTPTTAYDFANGE--------------IYVRFEESVRGCDAFVLQSHTAPINKWLMEQLIMIDALKRA   66 (304)
T ss_pred             CHHHHHHHhCCceeeeEEEECCCCC--------------EEEEECCCCCCCEEEEEeCCCCCCcHHHHHHHHHHHHHHHc
Confidence            4788999999987654433322222              22222333589999998775442 222   45677888899


Q ss_pred             CCeEEEEEEEe
Q 029741          152 GAEVVECACVV  162 (188)
Q Consensus       152 Ga~~v~v~~l~  162 (188)
                      ||+.+.++...
T Consensus        67 ~a~~i~~ViPY   77 (304)
T PRK03092         67 SAKRITVVLPF   77 (304)
T ss_pred             CCCeEEEEEec
Confidence            99987765544

>PRK02458 ribose-phosphate pyrophosphokinase; Provisional

Probab=85.99  E-value=17  Score=30.76  Aligned_cols=83  Identities=16%  Similarity=0.098  Sum_probs=50.0

Q ss_pred             EEEeCCCChhhHHHHHHHhCCCeEEEeecCCCCCcccchheeeeccceeEEEecCCCCCCCEEEEEcCcccc-hHH---H
Q 029741           66 VAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVAT-GGT---L  141 (188)
Q Consensus        66 Iv~v~~gG~~~a~~lA~~l~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gk~VLIVDDvi~T-G~T---l  141 (188)
                      ++-...+.-.+|..+|..||++...+..++..+++            ..+.+  .....|+.|+||-..-.. -..   +
T Consensus        11 ~i~~~~~~~~la~~ia~~lg~~l~~~~~~~FpdGE------------~~v~i--~~~v~g~dV~ii~s~~~~~nd~l~eL   76 (323)
T PRK02458         11 KLFSLNSNLEIAEKIAQAAGVPLGKLSSRQFSDGE------------IMINI--EESVRGDDIYIIQSTSFPVNDHLWEL   76 (323)
T ss_pred             EEEECCCCHHHHHHHHHHhCCceeeeEEEECCCCC------------EEEEe--cCCcCCCeEEEEecCCCCCchHHHHH
Confidence            33334555789999999999998655433322222            22222  233588999998764322 122   3


Q ss_pred             HHHHHHHHHcCCeEEEEEEEe
Q 029741          142 SAAVRLLERMGAEVVECACVV  162 (188)
Q Consensus       142 ~~~~~~L~~~Ga~~v~v~~l~  162 (188)
                      ..+++.++++||+.+.++...
T Consensus        77 ll~~~alr~~~a~~i~lViPY   97 (323)
T PRK02458         77 LIMIDACKRASANTVNVVLPY   97 (323)
T ss_pred             HHHHHHHHHcCCceEEEEEec
Confidence            445667788999877665544

>COG0462 PrsA Phosphoribosylpyrophosphate synthetase [Nucleotide transport and metabolism / Amino acid transport and metabolism]

Probab=83.77  E-value=8.6  Score=32.51  Aligned_cols=78  Identities=13%  Similarity=0.147  Sum_probs=50.5

Q ss_pred             CCChhhHHHHHHHhCCCeEEEeecCCCCCcccchheeeeccceeEEEecCCCCCCCEEEEEcCcccchH----HHHHHHH
Q 029741           71 ARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGG----TLSAAVR  146 (188)
Q Consensus        71 ~gG~~~a~~lA~~l~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~----Tl~~~~~  146 (188)
                      .+.-.+|..+|..|+.|+..+..++..++            +  +++......+|+.|.|+...-....    -+.-+++
T Consensus        11 ~s~~~La~~ia~~l~~~l~~~~~~rF~DG------------E--~~V~i~EsVrg~dVfI~qs~~~pvnd~lmELLi~id   76 (314)
T COG0462          11 SSNPELAEKIAKRLGIPLGKVEVKRFPDG------------E--IYVRIEESVRGKDVFIIQSTSPPVNDNLMELLIMID   76 (314)
T ss_pred             CCCHHHHHHHHHHhCCCcccceeEEcCCC------------c--EEEEecccccCCeEEEEeCCCCCcCHHHHHHHHHHH
Confidence            44457999999999999876543332222            2  2222233469999998766555333    2445677


Q ss_pred             HHHHcCCeEEEEEEEe
Q 029741          147 LLERMGAEVVECACVV  162 (188)
Q Consensus       147 ~L~~~Ga~~v~v~~l~  162 (188)
                      .++.+||+.|.++...
T Consensus        77 A~k~asA~~It~ViPY   92 (314)
T COG0462          77 ALKRASAKRITAVIPY   92 (314)
T ss_pred             HHHhcCCceEEEEeec
Confidence            8889999988876554

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	188
2dy0_A	190	Crystal Structure Of Project Jw0458 From Escherichi		1e-45
1ore_A	180	Human Adenine Phosphoribosyltransferase Length = 18		5e-34
1g2q_A	187	Crystal Structure Of Adenine Phosphoribosyltransfer		7e-24
1l1q_A	186	Crystal Structure Of Aprtase From Giardia Lamblia C		3e-20
1mzv_A	235	Crystal Structure Of Adenine Phosphoribosyltransfer		6e-18
1qb7_A	236	Crystal Structures Of Adenine Phosphoribosyltransfe		9e-16
1o57_A	291	Crystal Structure Of The Purine Operon Repressor Of		5e-04
1p4a_A	285	Crystal Structure Of The Purr Complexed With Cprpp		5e-04
1u9y_A	284	Crystal Structure Of Phosphoribosyl Diphosphate Syn		5e-04

>pdb|2DY0|A Chain A, Crystal Structure Of Project Jw0458 From Escherichia Coli Length = 190

Iteration: 1
 Score =  179 bits (453), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 83/162 (51%), Positives = 124/162 (76%), Gaps = 2/162 (1%)
Query: 13  RLQGISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEAR 72
           +L+ +  +I+ + D+P PGI+F+D+T+LL D KA+  ++D+ V+RY++ GI+ V G EAR
Sbjct: 14  QLEYLKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIDLLVERYKNAGITKVVGTEAR 73
Query: 73  GFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVID 132
           GF+FG  +AL +G  FVP+RKP KLP E ISE Y LEYGTD+LE+HV AI+PG++ LV+D
Sbjct: 74  GFLFGAPVALGLGVGFVPVRKPGKLPRETISETYDLEYGTDQLEIHVDAIKPGDKVLVVD 133
Query: 133 DLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLD 172
           DL+ATGGT+ A V+L+ R+G EV + A ++ L +  G++RL+
Sbjct: 134 DLLATGGTIEATVKLIRRLGGEVADAAFIINLFDLGGEQRLE 175

>pdb|1ORE|A Chain A, Human Adenine Phosphoribosyltransferase Length = 180

Iteration: 1
 Score =  140 bits (352), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 73/176 (41%), Positives = 112/176 (63%), Gaps = 5/176 (2%)
Query: 11  DPRLQGISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMG---ISVVA 67
           D  LQ + + IR  PDFP PG++F+DI+ +L D  +F+  + +     +      I  +A
Sbjct: 3   DSELQLVEQRIRSFPDFPTPGVVFRDISPVLKDPASFRAAIGLLARHLKATHGGRIDYIA 62
Query: 68  GIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGER 127
           G+++RGF+FGPS+A  +G   V +RK  KLPG  +  +Y LEYG   LE+   A+EPG+R
Sbjct: 63  GLDSRGFLFGPSLAQELGLGCVLIRKRGKLPGPTLWASYSLEYGKAELEIQKDALEPGQR 122
Query: 128 ALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLP--EGQRRLDGKPLYILVE 181
            +V+DDL+ATGGT++AA  LL R+ AEV+EC  +V L   +G+ +L   P + L++
Sbjct: 123 VVVVDDLLATGGTMNAACELLGRLQAEVLECVSLVELTSLKGREKLAPVPFFSLLQ 178

>pdb|1G2Q|A Chain A, Crystal Structure Of Adenine Phosphoribosyltransferase Length = 187

Iteration: 1
 Score =  106 bits (265), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 62/175 (35%), Positives = 106/175 (60%), Gaps = 7/175 (4%)
Query: 15  QGISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFV----DRYRDMGISVVAGIE 70
           Q +  A+   P+FP  GI+F+D   +  +   F+  +D F     + + ++ I  + G+E
Sbjct: 8   QELKLALHQYPNFPSEGILFEDFLPIFRNPGLFQKLIDAFKLHLEEAFPEVKIDYIVGLE 67
Query: 71  ARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALV 130
           +RGF+FGP++ALA+G  FVP+RK  KLPGE     Y  EYG+D  E+   AI  G   ++
Sbjct: 68  SRGFLFGPTLALALGVGFVPVRKAGKLPGECFKATYEKEYGSDLFEIQKNAIPAGSNVII 127
Query: 131 IDDLVATGGTLSAAVRLLERMGAEVVECACVVGLP--EGQRRLDGKPLYILVEPR 183
           +DD++ATGG+ +AA  L+E++ A ++E   V+ L   +G+ +L+  P++ L+  +
Sbjct: 128 VDDIIATGGSAAAAGELVEQLEANLLEYNFVMELDFLKGRSKLNA-PVFTLLNAQ 181

>pdb|1L1Q|A Chain A, Crystal Structure Of Aprtase From Giardia Lamblia Complexed With 9- Deazaadenine Length = 186

Iteration: 1
 Score = 94.7 bits (234), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 52/135 (38%), Positives = 78/135 (57%), Gaps = 1/135 (0%)
Query: 21  IRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSI 80
           I+ +PDFP  GI F+D++ +L    A           Y+D+ I+ V GIE+RGF+ G  +
Sbjct: 12  IKTIPDFPTKGIAFKDLSDILSTPAALDAVRKEVTAHYKDVPITKVVGIESRGFILGGIV 71
Query: 81  ALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTD-RLEMHVGAIEPGERALVIDDLVATGG 139
           A ++G  FV LRK  KLPG+V    + +EY     +E+    + P +  L+ DD++ATGG
Sbjct: 72  ANSLGVGFVALRKAGKLPGDVCKCTFDMEYQKGVTIEVQKRQLGPHDVVLLHDDVLATGG 131
Query: 140 TLSAAVRLLERMGAE 154
           TL AA+ L E  G +
Sbjct: 132 TLLAAIELCETAGVK 146

>pdb|1MZV|A Chain A, Crystal Structure Of Adenine Phosphoribosyltransferase (Aprt) From Leishmania Tarentolae Length = 235

Iteration: 1
 Score = 87.0 bits (214), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 52/138 (37%), Positives = 82/138 (59%), Gaps = 6/138 (4%)
Query: 34  FQDITTLLLDHKAFKDTVDIFVDRYRDM--GISVVAGIEARGFVFGPSIALAIGAKFVPL 91
           F D++++    +  K   D  V+RYR M    + + G +ARGF+FGP IA+ +G  FV +
Sbjct: 42  FADVSSITESPETLKAIRDFLVERYRTMSPAPTHILGFDARGFLFGPMIAVELGIPFVLM 101
Query: 92  RKPNKLPGEVI-SEAYVLEY---GTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRL 147
           RK +K  G +I SE Y  EY     + + +  G+I    R ++IDD++ATGGT  + ++L
Sbjct: 102 RKADKNAGLLIRSEPYEKEYKEAAPEVMTIRHGSIGKNSRVVLIDDVLATGGTALSGLQL 161
Query: 148 LERMGAEVVECACVVGLP 165
           +E  GAEVVE   ++ +P
Sbjct: 162 VEASGAEVVEMVSILTIP 179

>pdb|1QB7|A Chain A, Crystal Structures Of Adenine Phosphoribosyltransferase From Leishmania Donovani. Length = 236

Iteration: 1
 Score = 79.7 bits (195), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 79/138 (57%), Gaps = 6/138 (4%)
Query: 34  FQDITTLLLDHKAFKDTVDIFVDRYRDM--GISVVAGIEARGFVFGPSIALAIGAKFVPL 91
           F D++++    +  K   D  V RYR M    + + G +ARGF+FGP IA+ +   FV +
Sbjct: 41  FADVSSITESPETLKAIRDFLVQRYRAMSPAPTHILGFDARGFLFGPMIAVELEIPFVLM 100
Query: 92  RKPNKLPGEVI-SEAYVLEY---GTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRL 147
           RK +K  G +I SE Y  EY     + + +  G+I  G R ++IDD++ATGGT  + ++L
Sbjct: 101 RKADKNAGLLIRSEPYEKEYKEAAPEVMTIRYGSIGKGSRVVLIDDVLATGGTALSGLQL 160
Query: 148 LERMGAEVVECACVVGLP 165
           +E   A VVE   ++ +P
Sbjct: 161 VEASDAVVVEMVSILSIP 178

>pdb|1O57|A Chain A, Crystal Structure Of The Purine Operon Repressor Of Bacillus Subtilis Length = 291

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/114 (25%), Positives = 54/114 (47%), Gaps = 5/114 (4%)
Query: 53  IFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLP-GEVISEAYVLEYG 111
           +F   + +  I VV  +  +G     + A  +    V +RK NK+  G  +S  YV    
Sbjct: 121 LFASVFAEREIDVVMTVATKGIPLAYAAASYLNVPVVIVRKDNKVTEGSTVSINYV-SGS 179
Query: 112 TDRLE---MHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVV 162
           ++R++   +   +++ G   L+IDD +  GGT++  + LL+   A V     +V
Sbjct: 180 SNRIQTMSLAKRSMKTGSNVLIIDDFMKAGGTINGMINLLDEFNANVAGIGVLV 233

>pdb|1P4A|A Chain A, Crystal Structure Of The Purr Complexed With Cprpp Length = 285

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/114 (25%), Positives = 54/114 (47%), Gaps = 5/114 (4%)
Query: 53  IFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLP-GEVISEAYVLEYG 111
           +F   + +  I VV  +  +G     + A  +    V +RK NK+  G  +S  YV    
Sbjct: 121 LFASVFAEREIDVVMTVATKGIPLAYAAASYLNVPVVIVRKDNKVTEGSTVSINYV-SGS 179
Query: 112 TDRLE---MHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVV 162
           ++R++   +   +++ G   L+IDD +  GGT++  + LL+   A V     +V
Sbjct: 180 SNRIQTMSLAKRSMKTGSNVLIIDDFMKAGGTINGMINLLDEFNANVAGIGVLV 233

>pdb|1U9Y|A Chain A, Crystal Structure Of Phosphoribosyl Diphosphate Synthase From Methanocaldococcus Jannaschii Length = 284

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 15/33 (45%), Positives = 26/33 (78%)
Query: 129 LVIDDLVATGGTLSAAVRLLERMGAEVVECACV 161
            ++DD+++TGGT++ AV+LL+  GA+ +  ACV
Sbjct: 209 FIVDDIISTGGTMATAVKLLKEQGAKKIIAACV 241

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	188
2dy0_A	190	APRT, adenine phosphoribosyltransferase; structura	5e-92
1zn8_A	180	APRT, adenine phosphoribosyltransferase; glycosylt	3e-90
1g2q_A	187	Adenine phosphoribosyltransferase 1; dimer, single	2e-86
1l1q_A	186	Adenine phosphoribosyltransferase; aprtase, giardi	2e-82
1qb7_A	236	APRT, adenine phosphoribosyltransferase; dinucleot	1e-78
1o57_A	291	PUR operon repressor; purine operon repressor, hel	5e-58
1y0b_A	197	Xanthine phosphoribosyltransferase; purine metabol	3e-47
1vch_A	175	Phosphoribosyltransferase-related protein; structu	9e-36
2p1z_A	180	Phosphoribosyltransferase; STRU genomics, PSI-2, p	7e-13
2aee_A	211	OPRT, oprtase, orotate phosphoribosyltransferase;	2e-12
3m3h_A	234	OPRT, oprtase, orotate phosphoribosyltransferase;	5e-12
3dez_A	243	OPRT, oprtase, orotate phosphoribosyltransferase;	1e-11
2wns_A	205	Orotate phosphoribosyltransferase; alternative spl	1e-11
3qw4_B	453	UMP synthase; N-terminal orotidine monophosphate d	3e-11
2yzk_A	178	OPRT, oprtase, orotate phosphoribosyltransferase;	3e-09
2ps1_A	226	Orotate phosphoribosyltransferase 1; alpha beta, o	4e-08
3mjd_A	232	Orotate phosphoribosyltransferase; IDP02311, csgid	6e-07
1lh0_A	213	OMP synthase; loop closure, monomer closure, orota	5e-06
1vdm_A	153	Purine phosphoribosyltransferase; structural genom	7e-06
3n2l_A	238	OPRT, oprtase, orotate phosphoribosyltransferase;	1e-05
1wd5_A	208	Hypothetical protein TT1426; structural genomics,	3e-05
2xbu_A	221	Hypoxanthine-guanine phosphoribosyltransferase; gl	7e-05
1dku_A	317	Protein (phosphoribosyl pyrophosphate synthetase);	1e-04
1u9y_A	284	RPPK;, ribose-phosphate pyrophosphokinase; PRPP sy	1e-04
3lrt_A	286	Ribose-phosphate pyrophosphokinase; phosphoribosyl	1e-04
3dah_A	319	Ribose-phosphate pyrophosphokinase; pyrophosphoki	2e-04
3s5j_B	326	Ribose-phosphate pyrophosphokinase 1; nucleotide s	3e-04

>2dy0_A APRT, adenine phosphoribosyltransferase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.25A {Escherichia coli K12} Length = 190

 Score =  265 bits (680), Expect = 5e-92
 Identities = 86/175 (49%), Positives = 128/175 (73%), Gaps = 4/175 (2%)

Query: 11  DPRLQGISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIE 70
             +L+ +  +I+ + D+P PGI+F+D+T+LL D KA+  ++D+ V+RY++ GI+ V G E
Sbjct: 12  AQQLEYLKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIDLLVERYKNAGITKVVGTE 71

Query: 71  ARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALV 130
           ARGF+FG  +AL +G  FVP+RKP KLP E ISE Y LEYGTD+LE+HV AI+PG++ LV
Sbjct: 72  ARGFLFGAPVALGLGVGFVPVRKPGKLPRETISETYDLEYGTDQLEIHVDAIKPGDKVLV 131

Query: 131 IDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLDGK--PLYILVE 181
           +DDL+ATGGT+ A V+L+ R+G EV + A ++ L +  G++RL+ +    Y LV 
Sbjct: 132 VDDLLATGGTIEATVKLIRRLGGEVADAAFIINLFDLGGEQRLEKQGITSYSLVP 186

>1zn8_A APRT, adenine phosphoribosyltransferase; glycosyltransferase, purine salvage; HET: AMP; 1.76A {Homo sapiens} SCOP: c.61.1.1 PDB: 1ore_A* 1zn7_A* 1zn9_A* Length = 180

 Score =  260 bits (667), Expect = 3e-90
 Identities = 73/177 (41%), Positives = 111/177 (62%), Gaps = 5/177 (2%)

Query: 10  GDPRLQGISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMG---ISVV 66
            D  LQ + + IR  PDFP PG++F+DI+ +L D  +F+  + +     +      I  +
Sbjct: 2   ADSELQLVEQRIRSFPDFPTPGVVFRDISPVLKDPASFRAAIGLLARHLKATHGGRIDYI 61

Query: 67  AGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGE 126
           AG+++RGF+FGPS+A  +G   V +RK  KLPG  +  +Y LEYG   LE+   A+EPG+
Sbjct: 62  AGLDSRGFLFGPSLAQELGLGCVLIRKRGKLPGPTLWASYSLEYGKAELEIQKDALEPGQ 121

Query: 127 RALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLDGKPLYILVE 181
           R +V+DDL+ATGGT++AA  LL R+ AEV+EC  +V L    G+ +L   P + L++
Sbjct: 122 RVVVVDDLLATGGTMNAACELLGRLQAEVLECVSLVELTSLKGREKLAPVPFFSLLQ 178

>1g2q_A Adenine phosphoribosyltransferase 1; dimer, single domain, catalytic loop; 1.50A {Saccharomyces cerevisiae} SCOP: c.61.1.1 PDB: 1g2p_A Length = 187

 Score =  251 bits (644), Expect = 2e-86
 Identities = 62/177 (35%), Positives = 104/177 (58%), Gaps = 7/177 (3%)

Query: 11  DPRLQGISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFV----DRYRDMGISVV 66
               Q +  A+   P+FP  GI+F+D   +  +   F+  +D F     + + ++ I  +
Sbjct: 4   ASYAQELKLALHQYPNFPSEGILFEDFLPIFRNPGLFQKLIDAFKLHLEEAFPEVKIDYI 63

Query: 67  AGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGE 126
            G+E+RGF+FGP++ALA+G  FVP+RK  KLPGE     Y  EYG+D  E+   AI  G 
Sbjct: 64  VGLESRGFLFGPTLALALGVGFVPVRKAGKLPGECFKATYEKEYGSDLFEIQKNAIPAGS 123

Query: 127 RALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLDGKPLYILVE 181
             +++DD++ATGG+ +AA  L+E++ A ++E   V+ L    G+ +L+  P++ L+ 
Sbjct: 124 NVIIVDDIIATGGSAAAAGELVEQLEANLLEYNFVMELDFLKGRSKLNA-PVFTLLN 179

>1l1q_A Adenine phosphoribosyltransferase; aprtase, giardia lamblia, purine metabolism, cataly transferase; HET: 9DA; 1.85A {Giardia intestinalis} SCOP: c.61.1.1 PDB: 1l1r_A* Length = 186

 Score =  241 bits (617), Expect = 2e-82
 Identities = 56/172 (32%), Positives = 90/172 (52%), Gaps = 7/172 (4%)

Query: 17  ISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVF 76
               I+ +PDFP  GI F+D++ +L    A           Y+D+ I+ V GIE+RGF+ 
Sbjct: 8   AHALIKTIPDFPTKGIAFKDLSDILSTPAALDAVRKEVTAHYKDVPITKVVGIESRGFIL 67

Query: 77  GPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTD-RLEMHVGAIEPGERALVIDDLV 135
           G  +A ++G  FV LRK  KLPG+V    + +EY     +E+    + P +  L+ DD++
Sbjct: 68  GGIVANSLGVGFVALRKAGKLPGDVCKCTFDMEYQKGVTIEVQKRQLGPHDVVLLHDDVL 127

Query: 136 ATGGTLSAAVRLLERMGA--EVVECACVVGLPE--GQRRLDGK--PLYILVE 181
           ATGGTL AA+ L E  G   E +    +  +    G+ ++  K   L+ ++ 
Sbjct: 128 ATGGTLLAAIELCETAGVKPENIYINVLYEIEALKGREKVGQKCTRLFSVIR 179

>1qb7_A APRT, adenine phosphoribosyltransferase; dinucleotide binding fold; HET: ADE CIT; 1.50A {Leishmania donovani} SCOP: c.61.1.1 PDB: 1qb8_A* 1qcc_A* 1qcd_A 1mzv_A* Length = 236

 Score =  233 bits (596), Expect = 1e-78
 Identities = 56/183 (30%), Positives = 91/183 (49%), Gaps = 12/183 (6%)

Query: 11  DPRLQGISKAIR-VVPDF-PIPGIMFQDITTLLLDHKAFKDTVDIFVDRYR--DMGISVV 66
               Q + K+ R   P F P     F D++++    +  K   D  V RYR      + +
Sbjct: 16  HALSQLLKKSYRWYSPVFSPRNVPRFADVSSITESPETLKAIRDFLVQRYRAMSPAPTHI 75

Query: 67  AGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVI-SEAYVLEYG---TDRLEMHVGAI 122
            G +ARGF+FGP IA+ +   FV +RK +K  G +I SE Y  EY     + + +  G+I
Sbjct: 76  LGFDARGFLFGPMIAVELEIPFVLMRKADKNAGLLIRSEPYEKEYKEAAPEVMTIRYGSI 135

Query: 123 EPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLD--GKPLYI 178
             G R ++IDD++ATGGT  + ++L+E   A VVE   ++ +P      ++       Y 
Sbjct: 136 GKGSRVVLIDDVLATGGTALSGLQLVEASDAVVVEMVSILSIPFLKAAEKIHSTANSRYK 195

Query: 179 LVE 181
            ++
Sbjct: 196 DIK 198

>1o57_A PUR operon repressor; purine operon repressor, helix-turn-helix domain, phosphoribosyltranseferases, domain recombination, DNA binding; HET: EPE P6G 2PE PG4 1PE; 2.20A {Bacillus subtilis} SCOP: a.4.5.40 c.61.1.1 PDB: 1p4a_A* Length = 291

 Score =  182 bits (465), Expect = 5e-58
 Identities = 35/162 (21%), Positives = 65/162 (40%), Gaps = 6/162 (3%)

Query: 25  PDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAI 84
           P+  +PG  +  +T +L           +F   + +  I VV  +  +G     + A  +
Sbjct: 94  PERILPGG-YVYLTDILGKPSVLSKVGKLFASVFAEREIDVVMTVATKGIPLAYAAASYL 152

Query: 85  GAKFVPLRKPNKLP-GEVISEAYVLEY--GTDRLEMHVGAIEPGERALVIDDLVATGGTL 141
               V +RK NK+  G  +S  YV         + +   +++ G   L+IDD +  GGT+
Sbjct: 153 NVPVVIVRKDNKVTEGSTVSINYVSGSSNRIQTMSLAKRSMKTGSNVLIIDDFMKAGGTI 212

Query: 142 SAAVRLLERMGAEVVECACVVGLP--EGQRRLDGKPLYILVE 181
           +  + LL+   A V     +V     + +   +   L  L  
Sbjct: 213 NGMINLLDEFNANVAGIGVLVEAEGVDERLVDEYMSLLTLST 254

>1y0b_A Xanthine phosphoribosyltransferase; purine metabolism, STRU genomics, PSI, protein structure initative, midwest center structural genomics; HET: G4P; 1.80A {Bacillus subtilis} SCOP: c.61.1.1 PDB: 2fxv_A* Length = 197

 Score =  152 bits (386), Expect = 3e-47
 Identities = 32/171 (18%), Positives = 58/171 (33%), Gaps = 15/171 (8%)

Query: 26  DFPIPGIMFQDITTLL-------LDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGP 78
                G++  D    +       +D    +   D F  R+   GI+ +  IE+ G     
Sbjct: 10  KIEEEGVVLSDQVLKVDSFLNHQIDPLLMQRIGDEFASRFAKDGITKIVTIESSGIAPAV 69

Query: 79  SIALAIGAKFVPLRKPNKLPGE----VISEAYVLEYGTDRLEMHVGAIEPGERALVIDDL 134
              L +G   V  RK   L         S     +    ++ +    +   +  L+IDD 
Sbjct: 70  MTGLKLGVPVVFARKHKSLTLTDNLLTASVYSFTKQTESQIAVSGTHLSDQDHVLIIDDF 129

Query: 135 VATGGTLSAAVRLLERMGAEVVECACVVGLP--EGQRRLD--GKPLYILVE 181
           +A G      V ++++ GA +     V+      G+  L   G  +  L  
Sbjct: 130 LANGQAAHGLVSIVKQAGASIAGIGIVIEKSFQPGRDELVKLGYRVESLAR 180

>1vch_A Phosphoribosyltransferase-related protein; structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.94A {Thermus thermophilus} SCOP: c.61.1.1 Length = 175

 Score =  122 bits (307), Expect = 9e-36
 Identities = 27/161 (16%), Positives = 51/161 (31%), Gaps = 6/161 (3%)

Query: 17  ISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVF 76
           +    R VP           +   L D +  +   +            ++   E      
Sbjct: 8   VGGVTRHVPLIEPLPGRRIPLVEFLGDPEFTRAAAEALRPLV-PKEAEILFTTETSPIPL 66

Query: 77  GPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDR-----LEMHVGAIEPGERALVI 131
              +A A+G  +V  R+  +   E      V            L+         +R +++
Sbjct: 67  THVLAEALGLPYVVARRRRRPYMEDPIIQEVQTLTLGVGEVLWLDRRFAEKLLNQRVVLV 126

Query: 132 DDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQRRLD 172
            D+VA+G T+ A  +++ R G  VV    V         +D
Sbjct: 127 SDVVASGETMRAMEKMVLRAGGHVVARLAVFRQGTPGLAVD 167

>2p1z_A Phosphoribosyltransferase; STRU genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 2.44A {Corynebacterium diphtheriae} Length = 180

 Score = 62.7 bits (153), Expect = 7e-13
 Identities = 33/130 (25%), Positives = 52/130 (40%), Gaps = 18/130 (13%)

Query: 36  DITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAK--FVPLRK 93
           D+    L  +A +   ++  +   D     V G+         S+  A G +     +RK
Sbjct: 37  DLRRATLHARASRLIGELLRELTADWDYVAVGGLTLGADPVATSVMHADGREIHAFVVRK 96

Query: 94  PNKLPGEVISEAYVLEYGTD-RLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMG 152
             K            ++G   R+E   G    G++ LV++D   TG +   AV+ L   G
Sbjct: 97  EAK------------KHGMQRRIE---GPDVVGKKVLVVEDTTTTGNSPLTAVKALREAG 141

Query: 153 AEVVECACVV 162
           AEVV  A VV
Sbjct: 142 AEVVGVATVV 151

>2aee_A OPRT, oprtase, orotate phosphoribosyltransferase; structural genomics, PSI, structure initiative; 1.95A {Streptococcus pyogenes} SCOP: c.61.1.1 Length = 211

 Score = 62.0 bits (151), Expect = 2e-12
 Identities = 31/140 (22%), Positives = 54/140 (38%), Gaps = 18/140 (12%)

Query: 36  DITTLLLDHKAFKDTVDIFVDRYRDMGIS--VVAGIEARGFVFGPSIALAIGAKFVPLRK 93
           D    L   K      + FV+  +       V+AG    G   G  IA  +   F  +R 
Sbjct: 40  DNRVTLSYPKTRDLIENGFVETIKAHFPEVEVIAGTATAGIPHGAIIADKMTLPFAYIRS 99

Query: 94  PNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGA 153
             K            ++G        G +  G++ ++I+DL++TGG++  A     R GA
Sbjct: 100 KPK------------DHGAGNQI--EGRVLKGQKMVIIEDLISTGGSVLDAAAAASREGA 145

Query: 154 EVVECACVV--GLPEGQRRL 171
           +V+    +    LP+  +  
Sbjct: 146 DVLGVVAIFTYELPKASQNF 165

>3m3h_A OPRT, oprtase, orotate phosphoribosyltransferase; pyrimidine ribonucleotide biosynthesis, structural genomics, infectious diseases; 1.75A {Bacillus anthracis} PDB: 3osc_A* Length = 234

 Score = 61.3 bits (149), Expect = 5e-12
 Identities = 27/140 (19%), Positives = 50/140 (35%), Gaps = 18/140 (12%)

Query: 36  DITTLLLDHKAFKDTVDIFVDRYRD--MGISVVAGIEARGFVFGPSIALAIGAKFVPLRK 93
           D    L   K  +       +  ++    + V+AG    G      ++  +      +R 
Sbjct: 60  DNRLTLSYPKVRQTIAAGLEELIKEHFPTVEVIAGTATAGIAHAAWVSDRMDLPMCYVRS 119

Query: 94  PNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGA 153
             K             +G        G  E G++ +V++DL++TGG+    V  L   G 
Sbjct: 120 KAK------------GHGKGNQI--EGKAEKGQKVVVVEDLISTGGSAITCVEALREAGC 165

Query: 154 EVVECACVV--GLPEGQRRL 171
           EV+    +    L  G+ +L
Sbjct: 166 EVLGIVSIFTYELEAGKEKL 185

>3dez_A OPRT, oprtase, orotate phosphoribosyltransferase; glycosyltransferase, MAGN pyrimidine biosynthesis; 2.40A {Streptococcus mutans} Length = 243

 Score = 60.6 bits (147), Expect = 1e-11
 Identities = 30/140 (21%), Positives = 55/140 (39%), Gaps = 18/140 (12%)

Query: 36  DITTLLLDHKAFKDTVDIFVDRYRDMGIS--VVAGIEARGFVFGPSIALAIGAKFVPLRK 93
           D    L   +      + FV+  ++      V+AG    G   G  IA  +      +R 
Sbjct: 72  DNRITLSYPETRTLIENGFVETIKEAFPEVEVIAGTATAGIPHGAIIADKMNLPLAYIRS 131

Query: 94  PNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGA 153
             K            ++G        G +  G++ ++I+DL++TGG++  AV   +R GA
Sbjct: 132 KPK------------DHGAGNQI--EGRVTKGQKMVIIEDLISTGGSVLDAVAAAQREGA 177

Query: 154 EVVECACVV--GLPEGQRRL 171
           +V+    +    LP+     
Sbjct: 178 DVLGVVAIFTYELPKATANF 197

>2wns_A Orotate phosphoribosyltransferase; alternative splicing, multifunctional enzyme, lyase, polymorphism, decarboxylase, phosphoprotein; HET: OMP; 1.90A {Homo sapiens} Length = 205

 Score = 60.0 bits (146), Expect = 1e-11
 Identities = 31/129 (24%), Positives = 53/129 (41%), Gaps = 16/129 (12%)

Query: 36  DITTLLLDHKAFKDTVDIFVDRYRDMGIS--VVAGIEARGFVFGPSIALAIGAKFVPLRK 93
           D+  ++   +      DI     ++ GIS   V G+          I        +  RK
Sbjct: 34  DLRGIVSRPRLLSQVADILFQTAQNAGISFDTVCGVPYTALPLATVICSTNQIPMLIRRK 93

Query: 94  PNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGA 153
             K            +YGT RL    G I PGE  L+I+D+V +G ++   V +L++ G 
Sbjct: 94  ETK------------DYGTKRLV--EGTINPGETCLIIEDVVTSGSSVLETVEVLQKEGL 139

Query: 154 EVVECACVV 162
           +V +   ++
Sbjct: 140 KVTDAIVLL 148

>3qw4_B UMP synthase; N-terminal orotidine monophosphate decarboxylase domain C-TE orotate phosphoribosyltransferase domain, transferase, LYAS; HET: U5P; 3.00A {Leishmania donovani} Length = 453

 Score = 60.1 bits (146), Expect = 3e-11
 Identities = 29/127 (22%), Positives = 47/127 (37%), Gaps = 14/127 (11%)

Query: 36  DITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPN 95
           D+  L+      +     +    R      +AG+         +I+  +    +  R+  
Sbjct: 290 DLRRLVTYPAIMRLVAREYAKVLRHYKFDRIAGLPYAALPIASAISNEMNVPLIYPRREA 349

Query: 96  KLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEV 155
           K             YGT       G  + G+R ++IDDLV+TG T   A+  L   G EV
Sbjct: 350 K------------IYGTKAAI--EGEYKKGDRVVIIDDLVSTGETKVEAIEKLRSAGLEV 395

Query: 156 VECACVV 162
           V    +V
Sbjct: 396 VSIVVLV 402

>2yzk_A OPRT, oprtase, orotate phosphoribosyltransferase; rossmann fold, glycosyltransferase, magnesium, pyrimidine biosynthesis, structural genomics; 1.80A {Aeropyrum pernix} Length = 178

 Score = 53.0 bits (128), Expect = 3e-09
 Identities = 26/132 (19%), Positives = 50/132 (37%), Gaps = 23/132 (17%)

Query: 36  DITTLLLDHKAFKDTVDIFVDRYRDMGIS--VVAGIEARGFVFGPSIALAIGAKFVPLRK 93
           D+  LL D  ++   +D+ ++           V G+   G  +   +AL +      +R 
Sbjct: 30  DMRRLLGDESSYSVALDLLLEVGGQDLARSSAVIGVATGGLPWAAMLALRLSKPLGYVRP 89

Query: 94  PNKLPGEVISEAYVLEYGTDRLEMHVGAIE---PGERALVIDDLVATGGTLSAAVRLLER 150
             K             +GT         +E   P  R +V+DD+  TG +++ ++ +L  
Sbjct: 90  ERK------------GHGTLSQ------VEGDPPKGRVVVVDDVATTGTSIAKSIEVLRS 131

Query: 151 MGAEVVECACVV 162
            G  V     +V
Sbjct: 132 NGYTVGTALVLV 143

>2ps1_A Orotate phosphoribosyltransferase 1; alpha beta, oprtase-OA-PRPP complex; HET: ORO PRP; 1.75A {Saccharomyces cerevisiae} PDB: 2pry_A* 2prz_A* Length = 226

 Score = 50.3 bits (120), Expect = 4e-08
 Identities = 16/103 (15%), Positives = 39/103 (37%), Gaps = 5/103 (4%)

Query: 60  DMGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHV 119
           D+   V+ G   +G      + + +        +  +      +     ++G   +   V
Sbjct: 65  DLKFDVIFGPAYKGIPLAAIVCVKLAEIGGSKFQNIQY---AFNRKEAKDHGEGGII--V 119

Query: 120 GAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVV 162
           G+    +R L+IDD++  G  ++ A  ++     +VV     +
Sbjct: 120 GSALENKRILIIDDVMTAGTAINEAFEIISNAKGQVVGSIIAL 162

>3mjd_A Orotate phosphoribosyltransferase; IDP02311, csgid, structural genomics, center for structural genomics of infectious diseases; 1.90A {Francisella tularensis} Length = 232

 Score = 47.1 bits (112), Expect = 6e-07
 Identities = 19/91 (20%), Positives = 34/91 (37%), Gaps = 5/91 (5%)

Query: 75  VFGP---SIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVI 131
           +FGP    I L      V   K N             ++G   +   VGA    ++ L+I
Sbjct: 85  LFGPAYKGIPLVAAISTVLALKYNIDMPYAFDRKEAKDHGEGGVF--VGADMTNKKVLLI 142

Query: 132 DDLVATGGTLSAAVRLLERMGAEVVECACVV 162
           DD++  G     +   L+ + A++      +
Sbjct: 143 DDVMTAGTAFYESYNKLKIINAKIAGVVLSI 173

>1lh0_A OMP synthase; loop closure, monomer closure, orotate phosphoribosyltransferase; HET: ORO PRP; 2.00A {Salmonella typhimurium} SCOP: c.61.1.1 PDB: 1opr_A* 1sto_A* 1oro_A Length = 213

 Score = 44.4 bits (105), Expect = 5e-06
 Identities = 17/125 (13%), Positives = 43/125 (34%), Gaps = 11/125 (8%)

Query: 40  LLLDHKAFKDTVDIFVDRYRDMGIS--VVAGIEARGFVFGPSIALAIGAKFVPLRKPNKL 97
           L    +        + +   D GI   ++ G   +G     + A+A+            L
Sbjct: 39  LFNTGRDLALLGRFYAEALVDSGIEFDLLFGPAYKGIPIATTTAVALAEHH-----DKDL 93

Query: 98  PGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVE 157
           P    +     ++G       +       R +++DD++  G  +  ++ +++  GA +  
Sbjct: 94  PY-CFNRKEAKDHGEGGS---LVGSALQGRVMLVDDVITAGTAIRESMEIIQAHGATLAG 149

Query: 158 CACVV 162
               +
Sbjct: 150 VLISL 154

>1vdm_A Purine phosphoribosyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Pyrococcus horikoshii} SCOP: c.61.1.1 Length = 153

 Score = 43.0 bits (102), Expect = 7e-06
 Identities = 13/48 (27%), Positives = 27/48 (56%)

Query: 125 GERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQRRLD 172
            +R +++DD+  TG TL   +  ++++GA+ ++ AC+   P      D
Sbjct: 83  DKRVVIVDDVSDTGKTLEVVIEEVKKLGAKEIKIACLAMKPWTSVVPD 130

>3n2l_A OPRT, oprtase, orotate phosphoribosyltransferase; pyrimidine ribonucleotide biosynthesis, infectious diseases; 2.10A {Vibrio cholerae} Length = 238

 Score = 43.3 bits (102), Expect = 1e-05
 Identities = 13/103 (12%), Positives = 36/103 (34%), Gaps = 9/103 (8%)

Query: 60  DMGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHV 119
            +   V+ G   +G     + A+A+             P     +     +G       +
Sbjct: 86  GIEFDVLFGPAYKGIPIATTTAVALADHH-----DVDTPYCFNRKE-AKNHGEGGN---L 136

Query: 120 GAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVV 162
              +   R +++DD++  G  +  ++ L++   A++      +
Sbjct: 137 VGSKLEGRVMLVDDVITAGTAIRESMELIQANKADLAGVLVAI 179

>1wd5_A Hypothetical protein TT1426; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; HET: MES; 2.00A {Thermus thermophilus} SCOP: c.61.1.1 Length = 208

 Score = 41.9 bits (98), Expect = 3e-05
 Identities = 17/49 (34%), Positives = 26/49 (53%)

Query: 125 GERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQRRLDG 173
           G   +++DD VATG ++ AA+ ++ + G   V  A  V  PE   RL  
Sbjct: 120 GRDVVLVDDGVATGASMEAALSVVFQEGPRRVVVAVPVASPEAVERLKA 168

>2xbu_A Hypoxanthine-guanine phosphoribosyltransferase; glycosyltransferase, purine salvage, FLIP pepti; HET: 5GP; 1.80A {Saccharomyces cerevisiae} PDB: 2jkz_A* 2jky_A* Length = 221

 Score = 40.9 bits (95), Expect = 7e-05
 Identities = 26/139 (18%), Positives = 49/139 (35%), Gaps = 5/139 (3%)

Query: 35  QDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLRKP 94
           Q         K FK  + I +      G  + A I            + I A  + L + 
Sbjct: 16  QLCQVSAERIKNFKPDLIIAIGG----GGFIPARILRTFLKEPGVPTIRIFAIILSLYED 71

Query: 95  NKLPGEVISEAYVLEYGTDRLEMHVGAIEP-GERALVIDDLVATGGTLSAAVRLLERMGA 153
               G  + E  V    T  ++     ++  G+  L++D++  T  TL  A+  LE+  A
Sbjct: 72  LNSVGSEVEEVGVKVSRTQWIDYEQCKLDLVGKNVLIVDEVDDTRTTLHYALSELEKDAA 131

Query: 154 EVVECACVVGLPEGQRRLD 172
           E  +   +      + + +
Sbjct: 132 EQAKAKGIDTEKSPEMKTN 150

>1dku_A Protein (phosphoribosyl pyrophosphate synthetase); open alpha-beta structure, domain duplication, phosphoribosyltransferase type I fold; HET: AP2 ABM; 2.20A {Bacillus subtilis} SCOP: c.61.1.2 c.61.1.2 PDB: 1dkr_A* 1ibs_A* Length = 317

 Score = 41.0 bits (97), Expect = 1e-04
 Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 2/45 (4%)

Query: 117 MHV-GAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECAC 160
           M++ G IE G+ A++IDD++ T GT++ A   L   GA+ V   C
Sbjct: 209 MNIVGNIE-GKTAILIDDIIDTAGTITLAANALVENGAKEVYACC 252

>1u9y_A RPPK;, ribose-phosphate pyrophosphokinase; PRPP synthase, transferase; 2.65A {Methanocaldococcus jannaschii} SCOP: c.61.1.2 c.61.1.2 PDB: 1u9z_A* Length = 284

 Score = 40.6 bits (96), Expect = 1e-04
 Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 2/45 (4%)

Query: 117 MHV-GAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECAC 160
                  +      ++DD+++TGGT++ AV+LL+  GA+ +  AC
Sbjct: 197 APKTLDAK-DRDVFIVDDIISTGGTMATAVKLLKEQGAKKIIAAC 240

>3lrt_A Ribose-phosphate pyrophosphokinase; phosphoribosyl transferase, ATP analog binding, ATP-binding, metal-binding, nucleotide biosynthesis; HET: ADP; 1.53A {Thermoplasma volcanium} PDB: 3lpn_A* 3nag_A* 3mbi_A* Length = 286

 Score = 40.6 bits (96), Expect = 1e-04
 Identities = 12/45 (26%), Positives = 25/45 (55%), Gaps = 2/45 (4%)

Query: 117 MHV-GAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECAC 160
                 +  G++ L++DD+++TGGT++ +  LL   GA  +  + 
Sbjct: 195 KVPNVDVN-GKKLLIVDDIISTGGTIAKSSGLLREKGASKIYVSA 238

>3dah_A Ribose-phosphate pyrophosphokinase; pyrophosphoki seattle structural genomics center for infectious disease, magnesium, metal binding; HET: AMP; 2.30A {Burkholderia pseudomallei} Length = 319

 Score = 39.9 bits (94), Expect = 2e-04
 Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 2/45 (4%)

Query: 117 MHV-GAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECAC 160
           M++ G +E G   +++DD+V T GTL  A ++L+  GA+ V    
Sbjct: 208 MNIIGEVE-GRTCVIMDDMVDTAGTLCKAAQVLKERGAKQVFAYA 251

>3s5j_B Ribose-phosphate pyrophosphokinase 1; nucleotide synthesis, transferase; 2.02A {Homo sapiens} PDB: 2hcr_A* 3efh_A 2h06_A 2h07_A 2h08_A Length = 326

 Score = 39.5 bits (93), Expect = 3e-04
 Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 2/45 (4%)

Query: 117 MH-VGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECAC 160
           M  VG ++    A+++DD+  T GT+  A   L   GA  V    
Sbjct: 205 MVLVGDVK-DRVAILVDDMADTCGTICHAADKLLSAGATRVYAIL 248

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	188
2dy0_A	190	APRT, adenine phosphoribosyltransferase; structura	100.0
1zn8_A	180	APRT, adenine phosphoribosyltransferase; glycosylt	100.0
1g2q_A	187	Adenine phosphoribosyltransferase 1; dimer, single	100.0
1qb7_A	236	APRT, adenine phosphoribosyltransferase; dinucleot	100.0
1l1q_A	186	Adenine phosphoribosyltransferase; aprtase, giardi	99.97
3m3h_A	234	OPRT, oprtase, orotate phosphoribosyltransferase;	99.94
1vch_A	175	Phosphoribosyltransferase-related protein; structu	99.93
3dez_A	243	OPRT, oprtase, orotate phosphoribosyltransferase;	99.93
1y0b_A	197	Xanthine phosphoribosyltransferase; purine metabol	99.93
1o57_A	291	PUR operon repressor; purine operon repressor, hel	99.92
2yzk_A	178	OPRT, oprtase, orotate phosphoribosyltransferase;	99.92
2wns_A	205	Orotate phosphoribosyltransferase; alternative spl	99.92
3mjd_A	232	Orotate phosphoribosyltransferase; IDP02311, csgid	99.92
2p1z_A	180	Phosphoribosyltransferase; STRU genomics, PSI-2, p	99.92
3qw4_B	453	UMP synthase; N-terminal orotidine monophosphate d	99.91
1lh0_A	213	OMP synthase; loop closure, monomer closure, orota	99.91
3n2l_A	238	OPRT, oprtase, orotate phosphoribosyltransferase;	99.9
2ps1_A	226	Orotate phosphoribosyltransferase 1; alpha beta, o	99.9
2aee_A	211	OPRT, oprtase, orotate phosphoribosyltransferase;	99.89
3hvu_A	204	Hypoxanthine phosphoribosyltransferase; hypoxanthi	99.85
1vdm_A	153	Purine phosphoribosyltransferase; structural genom	99.83
1hgx_A	183	HGXPRTASE, hypoxanthine-guanine-xanthine phosphori	99.82
1fsg_A	233	HGPRTASE, hypoxanthine-guanine phosphoribosyltrans	99.81
2geb_A	185	Hypoxanthine-guanine phosphoribosyltransferase; HG	99.79
1z7g_A	217	HGPRT, HGPRTASE, hypoxanthine-guanine phosphoribos	99.78
2jbh_A	225	Phosphoribosyltransferase domain-containing prote;	99.78
3o7m_A	186	Hypoxanthine phosphoribosyltransferase; hypoxanthi	99.78
1pzm_A	211	HGPRT, hypoxanthine-guanine phosphoribosyltransfer	99.77
1tc1_A	220	Protein (hypoxanthine phosphoribosyltransferase);	99.76
1yfz_A	205	Hypoxanthine-guanine phosphoribosyltransferase; pr	99.76
2ywu_A	181	Hypoxanthine-guanine phosphoribosyltransferase; ro	99.74
3ozf_A	250	Hypoxanthine-guanine-xanthine phosphoribosyltrans;	99.74
1a3c_A	181	PYRR, pyrimidine operon regulatory protein PYRR; t	99.73
1nul_A	152	XPRT, xanthine-guanine phosphoribosyltransferase;	99.73
3ohp_A	177	Hypoxanthine phosphoribosyltransferase; structural	99.73
3lrt_A	286	Ribose-phosphate pyrophosphokinase; phosphoribosyl	99.72
1wd5_A	208	Hypothetical protein TT1426; structural genomics,	99.71
1ufr_A	181	TT1027, PYR mRNA-binding attenuation protein; pyri	99.69
1u9y_A	284	RPPK;, ribose-phosphate pyrophosphokinase; PRPP sy	99.67
2xbu_A	221	Hypoxanthine-guanine phosphoribosyltransferase; gl	99.66
3s5j_B	326	Ribose-phosphate pyrophosphokinase 1; nucleotide s	99.66
3acd_A	181	Hypoxanthine-guanine phosphoribosyltransferase; ro	99.64
3dah_A	319	Ribose-phosphate pyrophosphokinase; pyrophosphoki	99.63
2ji4_A	379	Phosphoribosyl pyrophosphate synthetase-associated	99.62
1dku_A	317	Protein (phosphoribosyl pyrophosphate synthetase);	99.62
1w30_A	201	PYRR bifunctional protein; transferase, glycosyltr	99.61
1ecf_A	504	Glutamine phosphoribosylpyrophosphate amidotransf;	99.58
1ao0_A	459	Glutamine phosphoribosylpyrophosphate amidotransfe	99.5
1dqn_A	230	Guanine phosphoribosyltransferase; protein-inhibit	99.38
1i5e_A	209	Uracil phosphoribosyltransferase; salvage pathway;	99.34
1o5o_A	221	Uracil phosphoribosyltransferase; TM0721, structur	99.3
2ehj_A	208	Uracil phosphoribosyltransferase; structural genom	99.2
2e55_A	208	Uracil phosphoribosyltransferase; structural genom	99.19
1v9s_A	208	Uracil phosphoribosyltransferase; pyrimidine salva	99.15
1bd3_D	243	Uprtase, uracil phosphoribosyltransferase; glycosy	98.95
3dmp_A	217	Uracil phosphoribosyltransferase; structural genom	98.81
1xtt_A	216	Probable uracil phosphoribosyltransferase; tetrame	98.58
3dah_A	319	Ribose-phosphate pyrophosphokinase; pyrophosphoki	88.21
3s5j_B	326	Ribose-phosphate pyrophosphokinase 1; nucleotide s	82.99
1u9y_A	284	RPPK;, ribose-phosphate pyrophosphokinase; PRPP sy	81.57

>2dy0_A APRT, adenine phosphoribosyltransferase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.25A {Escherichia coli K12}

Probab=100.00  E-value=3.7e-32  Score=211.62  Aligned_cols=179  Identities=49%  Similarity=0.912  Sum_probs=150.2

Q ss_pred             CCCCCCh-hHHHHhhcccccCCCCCCCceEEechhhhcCHHHHHHHHHHHHHHHhcCCCcEEEEeCCCChhhHHHHHHHh
Q 029741            6 NGLRGDP-RLQGISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAI   84 (188)
Q Consensus         6 ~~~~~~~-~~~~~~~~~r~~~~~~~~g~~~~d~~~ll~~~~~~~~l~~~la~~~~~~~~d~Iv~v~~gG~~~a~~lA~~l   84 (188)
                      -||.... .|+.|.+.+|..|+||.+|+.|.|+.+++.+++.++.+++.+++.+.+.++|+|++++.+|+++|..+|..+
T Consensus         6 ~~~~~~~~~~~~l~~~i~~~p~~~~~g~~~~d~~~~~~~~~~~~~l~~~la~~~~~~~~d~Iv~v~~rG~~~a~~la~~l   85 (190)
T 2dy0_A            6 SGMTATAQQLEYLKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIDLLVERYKNAGITKVVGTEARGFLFGAPVALGL   85 (190)
T ss_dssp             ---CCCHHHHHHHHHHSEEETTCSSTTCCEEETHHHHHCHHHHHHHHHHHHHHHTTTTCCEEEEETTHHHHHHHHHHHHH
T ss_pred             ccccccHHHHHHHHHHHhhCCCCCCCCeEEEeChhhhcCHHHHHHHHHHHHHHhccCCCCEEEEECcccHHHHHHHHHHH
Confidence            3454333 378899999999999999999999999999999999999999999977678999999999999999999999


Q ss_pred             CCCeEEEeecCCCCCcccchheeeeccceeEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeC
Q 029741           85 GAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGL  164 (188)
Q Consensus        85 ~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~  164 (188)
                      ++|++.++|..+.+....+..++.+++...+.+..+...+|++||||||++|||+|+.++++.|+++|++++.+++++++
T Consensus        86 ~~p~~~~rk~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~gk~VLlVDDvitTG~Tl~~a~~~L~~~Ga~~V~~~~l~~~  165 (190)
T 2dy0_A           86 GVGFVPVRKPGKLPRETISETYDLEYGTDQLEIHVDAIKPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVADAAFIINL  165 (190)
T ss_dssp             TCEEEEEBSTTCCCSCEEEEEEEETTEEEEEEEEGGGCCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEEE
T ss_pred             CCCEEEEEecCCCCcccccceehhhcCceEEEEeccccCCcCEEEEEEccccchHHHHHHHHHHHHcCCEEEEEEEEEEc
Confidence            99998887766555444443444344445566553444699999999999999999999999999999999999999999


Q ss_pred             hh--hhhccC--CCCeEEEEeccc
Q 029741          165 PE--GQRRLD--GKPLYILVEPRL  184 (188)
Q Consensus       165 ~~--~~~~l~--~~~~~~l~~~~~  184 (188)
                      .+  ++++|+  ++|+++|+++++
T Consensus       166 ~~~~~~~~l~~~g~~v~sl~~~~~  189 (190)
T 2dy0_A          166 FDLGGEQRLEKQGITSYSLVPFPG  189 (190)
T ss_dssp             GGGCHHHHHHTTTCEEEEEEEECC
T ss_pred             cCcchHHHHhhCCCcEEEEEEecC
Confidence            75  778886  899999999875

>1zn8_A APRT, adenine phosphoribosyltransferase; glycosyltransferase, purine salvage; HET: AMP; 1.76A {Homo sapiens} SCOP: c.61.1.1 PDB: 1ore_A* 1zn7_A* 1zn9_A*

Probab=100.00  E-value=5.4e-32  Score=208.81  Aligned_cols=173  Identities=42%  Similarity=0.806  Sum_probs=147.5

Q ss_pred             ChhHHHHhhcccccCCCCCCCceEEechhhhcCHHHHHHHHHHHHHHHhcC---CCcEEEEeCCCChhhHHHHHHHhCCC
Q 029741           11 DPRLQGISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRDM---GISVVAGIEARGFVFGPSIALAIGAK   87 (188)
Q Consensus        11 ~~~~~~~~~~~r~~~~~~~~g~~~~d~~~ll~~~~~~~~l~~~la~~~~~~---~~d~Iv~v~~gG~~~a~~lA~~l~~p   87 (188)
                      .|.|+.|.+.+|..|+||.+|..|.|+..++.+|+..+.+++.+++.+.+.   ++|+|++++.||+++|..+|..+++|
T Consensus         3 ~~~~~~l~~~i~~~~~~p~~g~~~~d~~~~l~~~~~~~~la~~l~~~~~~~~~~~~d~vv~v~~~G~~~a~~la~~l~~p   82 (180)
T 1zn8_A            3 DSELQLVEQRIRSFPDFPTPGVVFRDISPVLKDPASFRAAIGLLARHLKATHGGRIDYIAGLDSRGFLFGPSLAQELGLG   82 (180)
T ss_dssp             CHHHHHHHTTCEEEETCSSTTCEEEECHHHHHSHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTTHHHHHHHHHHHHTCE
T ss_pred             hHHHHHHHHHHhcCCCCCcCCeEEEecHHHhcCHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHhCCC
Confidence            477899999999999999999999999999999999999999999988653   38999999999999999999999999


Q ss_pred             eEEEeecCCCCCcccchheeeeccceeEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChh-
Q 029741           88 FVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE-  166 (188)
Q Consensus        88 ~~~~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~-  166 (188)
                      +.++++..+.+....+..++.+++.+.+.+..+...+|++||||||++|||+|+.++++.|+++|++++.+++++++++ 
T Consensus        83 ~~~~r~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~~l~~~~~~  162 (180)
T 1zn8_A           83 CVLIRKRGKLPGPTLWASYSLEYGKAELEIQKDALEPGQRVVVVDDLLATGGTMNAACELLGRLQAEVLECVSLVELTSL  162 (180)
T ss_dssp             EEEEEETTCCCSSEEEEEEEETTEEEEEEEETTSSCTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEEEGGG
T ss_pred             EEEEEecCCCCcccccHHHHHhcCccEEEEeccccCCCCEEEEEcCCcccHHHHHHHHHHHHHcCCEEEEEEEEEEccCc
Confidence            9887776554443333333333334456665444468999999999999999999999999999999999999999975 


Q ss_pred             -hhhccCCCCeEEEEecc
Q 029741          167 -GQRRLDGKPLYILVEPR  183 (188)
Q Consensus       167 -~~~~l~~~~~~~l~~~~  183 (188)
                       +.++++++|+++|++++
T Consensus       163 ~~~~~l~~~~~~sl~~~~  180 (180)
T 1zn8_A          163 KGREKLAPVPFFSLLQYE  180 (180)
T ss_dssp             CHHHHHTTSCEEEEEEEC
T ss_pred             chhhhhcCCceEEEEecC
Confidence             67888899999999874

>1g2q_A Adenine phosphoribosyltransferase 1; dimer, single domain, catalytic loop; 1.50A {Saccharomyces cerevisiae} SCOP: c.61.1.1 PDB: 1g2p_A

Probab=100.00  E-value=6.4e-32  Score=209.77  Aligned_cols=172  Identities=36%  Similarity=0.708  Sum_probs=145.3

Q ss_pred             hhHHHHhhcccccCCCCCCCceEEechhhhcCHHHHHHHHHHHHHHHhc----CCCcEEEEeCCCChhhHHHHHHHhCCC
Q 029741           12 PRLQGISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRD----MGISVVAGIEARGFVFGPSIALAIGAK   87 (188)
Q Consensus        12 ~~~~~~~~~~r~~~~~~~~g~~~~d~~~ll~~~~~~~~l~~~la~~~~~----~~~d~Iv~v~~gG~~~a~~lA~~l~~p   87 (188)
                      ++.++|.+.+|..|+||.+|+.|+|+..++.+++.++.+++.|++++.+    .++|+|+|++.||+++|..+|..+++|
T Consensus         5 ~~~~~l~~~~~~~~~~p~~g~~~~d~~~~l~~~~~~~~~~~~La~~i~~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~~p   84 (187)
T 1g2q_A            5 SYAQELKLALHQYPNFPSEGILFEDFLPIFRNPGLFQKLIDAFKLHLEEAFPEVKIDYIVGLESRGFLFGPTLALALGVG   84 (187)
T ss_dssp             HHHHHHHHHCEEETTCSSTTCCEEECHHHHHSHHHHHHHHHHHHHHHHHHCTTSCCCEEEEETTTHHHHHHHHHHHHTCE
T ss_pred             HHHHHHHHhcccCCCCCCCCEEEEehHhhhcCHHHHHHHHHHHHHHHhhhcccCCCCEEEEEccCcHHHHHHHHHHHCCC
Confidence            4677899999999999999999999999999999999999999999976    568999999999999999999999999


Q ss_pred             eEEEeecCCCCCcccchheeeeccceeEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChh-
Q 029741           88 FVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE-  166 (188)
Q Consensus        88 ~~~~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~-  166 (188)
                      +..+++..+.++...+..++.+++.+.+.+..+...+|++||||||++|||+|+.++++.|+++|++++.+++++++++ 
T Consensus        85 ~~~~rk~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~~l~~~~~~  164 (187)
T 1g2q_A           85 FVPVRKAGKLPGECFKATYEKEYGSDLFEIQKNAIPAGSNVIIVDDIIATGGSAAAAGELVEQLEANLLEYNFVMELDFL  164 (187)
T ss_dssp             EEEEEETTCSCSSEEEEEEECSSCEEEEEEETTSSCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEECCCS
T ss_pred             EEEEEEeCCCCcceecHHHHHHhCCCcEEEecccCCCcCEEEEECCCcccHHHHHHHHHHHHHcCCeEEEEEEEEEccCc
Confidence            9888776654444333334433444566665444569999999999999999999999999999999999999999985 


Q ss_pred             -hhhccCCCCeEEEEeccc
Q 029741          167 -GQRRLDGKPLYILVEPRL  184 (188)
Q Consensus       167 -~~~~l~~~~~~~l~~~~~  184 (188)
                       +++++ |+|++||+++++
T Consensus       165 ~g~~~l-~~~~~sl~~~~~  182 (187)
T 1g2q_A          165 KGRSKL-NAPVFTLLNAQK  182 (187)
T ss_dssp             SCCCCC-SSCEEECC----
T ss_pred             Cchhhc-CccEEEEEEech
Confidence             67788 999999999986

>1qb7_A APRT, adenine phosphoribosyltransferase; dinucleotide binding fold; HET: ADE CIT; 1.50A {Leishmania donovani} SCOP: c.61.1.1 PDB: 1qb8_A* 1qcc_A* 1qcd_A 1mzv_A*

Probab=100.00  E-value=1.1e-31  Score=215.53  Aligned_cols=176  Identities=32%  Similarity=0.540  Sum_probs=152.5

Q ss_pred             CChhHHHHhhccccc-CCCCCCCc-eEEechhhhcCHHHHHHHHHHHHHHHhcC--CCcEEEEeCCCChhhHHHHHHHhC
Q 029741           10 GDPRLQGISKAIRVV-PDFPIPGI-MFQDITTLLLDHKAFKDTVDIFVDRYRDM--GISVVAGIEARGFVFGPSIALAIG   85 (188)
Q Consensus        10 ~~~~~~~~~~~~r~~-~~~~~~g~-~~~d~~~ll~~~~~~~~l~~~la~~~~~~--~~d~Iv~v~~gG~~~a~~lA~~l~   85 (188)
                      ++++.++|.+.+|+. |+||.+|+ .|+|+..++.+|+.++.+++.|++.+.+.  ++|+|+|++.||+++|..+|..|+
T Consensus        15 ~~~~~~~l~~~i~~~~~dfp~~gip~~~D~~~ll~~~~~~~~~~~~la~~i~~~~~~~d~Ivgv~~gG~~~a~~lA~~L~   94 (236)
T 1qb7_A           15 SHALSQLLKKSYRWYSPVFSPRNVPRFADVSSITESPETLKAIRDFLVQRYRAMSPAPTHILGFDARGFLFGPMIAVELE   94 (236)
T ss_dssp             TSHHHHHHHHHCCEECGGGSSSCSSSEECTHHHHTCHHHHHHHHHHHHHHHHHCSSCCSEEEEETTGGGGTHHHHHHHHT
T ss_pred             ChHHHHHHHHHhcccCCCCCCCCCEeEEEhHhhcCCHHHHHHHHHHHHHHHHhhCCCCCEEEEECcCcHHHHHHHHHHhC
Confidence            678899999999999 99999999 99999999999999999999999999876  789999999999999999999999


Q ss_pred             CCeEEEeecCCCCCccc-chheeeec---cceeEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEE
Q 029741           86 AKFVPLRKPNKLPGEVI-SEAYVLEY---GTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACV  161 (188)
Q Consensus        86 ~p~~~~~k~~~~~~~~~-~~~~~~~~---~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l  161 (188)
                      +|+++++|..+.++... +.++..++   +.+.+.+..+...+|++||||||++|||+|+.++++.|+++|+++++++++
T Consensus        95 ~p~~~~rk~~k~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~~~Gk~VLIVDDvitTG~Tl~~a~~~L~~~Ga~~v~v~~l  174 (236)
T 1qb7_A           95 IPFVLMRKADKNAGLLIRSEPYEKEYKEAAPEVMTIRYGSIGKGSRVVLIDDVLATGGTALSGLQLVEASDAVVVEMVSI  174 (236)
T ss_dssp             CCEEEEBCGGGCCSSEEECCCCCCCTTSCCCCCCEEETTSSCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred             CCEEEEEEecCCCCcceeceeccchhhhcCcceEEEecCCCCCcCEEEEEecccccHHHHHHHHHHHHHcCCeEEEEEEE
Confidence            99998887665554433 33344333   334566654555699999999999999999999999999999999999999


Q ss_pred             eeChh--hhhccC--------CCCeEEEEecccc
Q 029741          162 VGLPE--GQRRLD--------GKPLYILVEPRLS  185 (188)
Q Consensus       162 ~~~~~--~~~~l~--------~~~~~~l~~~~~~  185 (188)
                      +++.+  +++++.        |+++++|+++++.
T Consensus       175 ~~~~~~~g~~~l~~~~~~~~~g~~v~sl~~~~~~  208 (236)
T 1qb7_A          175 LSIPFLKAAEKIHSTANSRYKDIKFISLLSDDAL  208 (236)
T ss_dssp             EECGGGCHHHHHHHHHHHTTTTCCEEEEEEGGGC
T ss_pred             EEcccccHHHHHhhhcccccCCCcEEEEEEcccc
Confidence            99975  677776        8999999999873

>1l1q_A Adenine phosphoribosyltransferase; aprtase, giardia lamblia, purine metabolism, cataly transferase; HET: 9DA; 1.85A {Giardia intestinalis} SCOP: c.61.1.1 PDB: 1l1r_A*

Probab=99.97  E-value=4.5e-30  Score=199.21  Aligned_cols=174  Identities=32%  Similarity=0.552  Sum_probs=146.7

Q ss_pred             ChhHHHHhhcccccCCCCCCCceEEechhhhcCHHHHHHHHHHHHHHHhcCCCcEEEEeCCCChhhHHHHHHHhCCCeEE
Q 029741           11 DPRLQGISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVP   90 (188)
Q Consensus        11 ~~~~~~~~~~~r~~~~~~~~g~~~~d~~~ll~~~~~~~~l~~~la~~~~~~~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~   90 (188)
                      .|.++.|.+.+|.+|+||.+|..|.|+..++.+++..+.+++.+++.+.+.++|+|+|++.||+++|..+|..+++|+..
T Consensus         2 ~~~~~~l~~~~~~~p~~p~~g~~~~d~~~~l~~~~~~~~l~~~la~~~~~~~~d~Iv~vp~rG~~~A~~la~~l~~p~~~   81 (186)
T 1l1q_A            2 TMSVADAHALIKTIPDFPTKGIAFKDLSDILSTPAALDAVRKEVTAHYKDVPITKVVGIESRGFILGGIVANSLGVGFVA   81 (186)
T ss_dssp             CCCHHHHHHTCEEETTCSSTTCCEEECHHHHTCHHHHHHHHHHHHHHTTTSCCCEEEEESGGGHHHHHHHHHHHTCEEEE
T ss_pred             chhHHHHHhhhccCCCCCCCCeEEEEhHHHhCCHHHHHHHHHHHHHHhhccCCCEEEEcCcccHHHHHHHHHHhCCCEEE
Confidence            36788899999999999999999999999999999999999999998876678999999999999999999999999988


Q ss_pred             EeecCCCCCcccchheeeeccce-eEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCe--EEEEEEEeeChh-
Q 029741           91 LRKPNKLPGEVISEAYVLEYGTD-RLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAE--VVECACVVGLPE-  166 (188)
Q Consensus        91 ~~k~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~--~v~v~~l~~~~~-  166 (188)
                      ++|..+.++......++..++.. .+.+..+...+|++||||||++|||+|+.++++.|+++|++  ++.+++++++++ 
T Consensus        82 ~rk~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~gk~VLLVDDVitTG~Tl~aa~~~L~~~Ga~~~~V~~~~l~~k~~~  161 (186)
T 1l1q_A           82 LRKAGKLPGDVCKCTFDMEYQKGVTIEVQKRQLGPHDVVLLHDDVLATGGTLLAAIELCETAGVKPENIYINVLYEIEAL  161 (186)
T ss_dssp             EEETTSSCSSEEEEEEEETTEEEEEEEEEGGGCCTTCCEEEEEEEESSSHHHHHHHHHHHHTTCCGGGEEEEEEEECGGG
T ss_pred             EEecCCCCCceechhhhhhcCcceEEEEecccCCCcCEEEEEecccccHHHHHHHHHHHHHcCCCcceEEEEEEEEccCc
Confidence            87766544443333333222322 45554344458999999999999999999999999999999  999999999986 


Q ss_pred             -hhhccCCCCeEEEEeccc
Q 029741          167 -GQRRLDGKPLYILVEPRL  184 (188)
Q Consensus       167 -~~~~l~~~~~~~l~~~~~  184 (188)
                       +++++.+..+.+|+-+.+
T Consensus       162 ~g~~~l~~~~~~~~~~~~~  180 (186)
T 1l1q_A          162 KGREKVGQKCTRLFSVIRE  180 (186)
T ss_dssp             CHHHHHTTTCCCEEEEEEC
T ss_pred             cHHHHHhhcCcceehhhhh
Confidence             788999888888887654

>3m3h_A OPRT, oprtase, orotate phosphoribosyltransferase; pyrimidine ribonucleotide biosynthesis, structural genomics, infectious diseases; 1.75A {Bacillus anthracis} PDB: 3osc_A*

Probab=99.94  E-value=3.4e-26  Score=183.11  Aligned_cols=143  Identities=20%  Similarity=0.321  Sum_probs=117.3

Q ss_pred             ceEEechhhhcCHHHHHHHHHHHHHHHhcC--CCcEEEEeCCCChhhHHHHHHHhCCCeEEEeecCCCCCcccchheeee
Q 029741           32 IMFQDITTLLLDHKAFKDTVDIFVDRYRDM--GISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLE  109 (188)
Q Consensus        32 ~~~~d~~~ll~~~~~~~~l~~~la~~~~~~--~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~~~k~~~~~~~~~~~~~~~~  109 (188)
                      ..|+|+..++.+|+.++.+++.+++.+.+.  ++|+|+|++.+|+++|..+|..|++|++++||..+.++..        
T Consensus        56 p~Y~d~~~~~~~p~~~~~l~~~la~~i~~~~~~~D~Ivg~~~gGi~~a~~lA~~L~~p~~~vrk~~k~~G~~--------  127 (234)
T 3m3h_A           56 PIYCDNRLTLSYPKVRQTIAAGLEELIKEHFPTVEVIAGTATAGIAHAAWVSDRMDLPMCYVRSKAKGHGKG--------  127 (234)
T ss_dssp             SEEECGGGGGGCHHHHHHHHHHHHHHHHHHCTTCCEEEEC---CHHHHHHHHHHHTCCEEEEC-----------------
T ss_pred             CEEEeCHHhccCHHHHHHHHHHHHHHHHHhCCCCCEEEEeccchHHHHHHHHHHcCCCEEEEEEeeccCCcc--------
Confidence            789999999999999999999999999865  7899999999999999999999999999988766533221        


Q ss_pred             ccceeEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChh--hhhccC--CCCeEEEEecccc
Q 029741          110 YGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLD--GKPLYILVEPRLS  185 (188)
Q Consensus       110 ~~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~--~~~~l~--~~~~~~l~~~~~~  185 (188)
                         ..+.   +...+|++||||||++|||+|+.++++.|+++|++++++++++++..  +.++++  |+|+++|+++++.
T Consensus       128 ---~~i~---g~~~~Gk~VLIVDDvitTG~Tl~~a~~~L~~~Ga~vv~v~~l~~~~~~~~~e~l~~~gi~v~sL~~~~dl  201 (234)
T 3m3h_A          128 ---NQIE---GKAEKGQKVVVVEDLISTGGSAITCVEALREAGCEVLGIVSIFTYELEAGKEKLEAANVASYSLSDYSAL  201 (234)
T ss_dssp             ---CCEE---SCCCTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEECCCHHHHHHHHHTTCCEEESSCHHHH
T ss_pred             ---eEEe---cccCCCCEEEEEecccchhHHHHHHHHHHHHCCCEEEEEEEEEECcCchHHHHHHhcCCCEEEEeeHHHH
Confidence               1122   45569999999999999999999999999999999999999999853  677774  9999999999986


Q ss_pred             ccC
Q 029741          186 VNY  188 (188)
Q Consensus       186 ~~~  188 (188)
                      ++|
T Consensus       202 ~~~  204 (234)
T 3m3h_A          202 TEV  204 (234)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            543

>1vch_A Phosphoribosyltransferase-related protein; structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.94A {Thermus thermophilus} SCOP: c.61.1.1

Probab=99.93  E-value=3.3e-26  Score=175.43  Aligned_cols=166  Identities=19%  Similarity=0.194  Sum_probs=129.8

Q ss_pred             CChhHHHHhhcccccCCCCCCCceEEechhhhcCHHHHHHHHHHHHHHHhcCCCcEEEEeCCCChhhHHHHHHHhCCCeE
Q 029741           10 GDPRLQGISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFV   89 (188)
Q Consensus        10 ~~~~~~~~~~~~r~~~~~~~~g~~~~d~~~ll~~~~~~~~l~~~la~~~~~~~~d~Iv~v~~gG~~~a~~lA~~l~~p~~   89 (188)
                      .+|+  ++.+.+|.+|+||.+.-.|++...+..+++..+.+++.+++.+.. ++|+|++++.||+++|..+|..+++|+.
T Consensus         3 ~~~~--~~~~~~~~~~~~~~~~g~~i~~~k~~~~~~~~~~~~~~la~~~~~-~~d~Iv~v~~gg~~~a~~la~~l~~p~~   79 (175)
T 1vch_A            3 TYPI--TVGGVTRHVPLIEPLPGRRIPLVEFLGDPEFTRAAAEALRPLVPK-EAEILFTTETSPIPLTHVLAEALGLPYV   79 (175)
T ss_dssp             CEEE--EETTEEEEECEEEEETTEEEECCCCTTCHHHHHHHHHHHGGGSCT-TCCEEEEESSTHHHHHHHHHHHHTCCEE
T ss_pred             ceeE--EecceeeEcCceEcCCCcEEEeeeccCCHHHHHHHHHHHHHHhcc-CCCEEEEeCCcChHHHHHHHHHhCCCEE
Confidence            4453  688899999999987334799999999999999999999988865 7899999999999999999999999998


Q ss_pred             EEeecCCC--CCcccchheeeecc-ceeEEEecCCC--CCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeC
Q 029741           90 PLRKPNKL--PGEVISEAYVLEYG-TDRLEMHVGAI--EPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGL  164 (188)
Q Consensus        90 ~~~k~~~~--~~~~~~~~~~~~~~-~~~~~l~~~~~--~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~  164 (188)
                      .+++..+.  +.......++.+.+ .+.+.+..+..  .+|++||||||++|||+|+.++++.|+++|++++.+++++++
T Consensus        80 ~~rk~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~v~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga~~V~~~~l~~~  159 (175)
T 1vch_A           80 VARRRRRPYMEDPIIQEVQTLTLGVGEVLWLDRRFAEKLLNQRVVLVSDVVASGETMRAMEKMVLRAGGHVVARLAVFRQ  159 (175)
T ss_dssp             EEBSSCCTTCCSCEEEECCC------CEEEECHHHHHHHTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEEC
T ss_pred             EEEecCCCCCCcceeeeeeccccCCceEEEEecccccccCCCEEEEEeccccchHHHHHHHHHHHHcCCeEEEEEEEEec
Confidence            77765432  12111111111111 12344432221  389999999999999999999999999999999999999998


Q ss_pred             hhhhhccCCCCeEEEEecc
Q 029741          165 PEGQRRLDGKPLYILVEPR  183 (188)
Q Consensus       165 ~~~~~~l~~~~~~~l~~~~  183 (188)
                      +..     +.|+++|..++
T Consensus       160 ~~~-----~~~~~sl~~~~  173 (175)
T 1vch_A          160 GTP-----GLAVDTVAELP  173 (175)
T ss_dssp             SCC-----SSCCEEEEECC
T ss_pred             CCC-----CcceEEEEeec
Confidence            743     78999999876

>3dez_A OPRT, oprtase, orotate phosphoribosyltransferase; glycosyltransferase, MAGN pyrimidine biosynthesis; 2.40A {Streptococcus mutans}

Probab=99.93  E-value=1.2e-25  Score=180.84  Aligned_cols=143  Identities=22%  Similarity=0.346  Sum_probs=123.0

Q ss_pred             ceEEechhhhcCHHHHHHHHHHHHHHHhcC--CCcEEEEeCCCChhhHHHHHHHhCCCeEEEeecCCCCCcccchheeee
Q 029741           32 IMFQDITTLLLDHKAFKDTVDIFVDRYRDM--GISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLE  109 (188)
Q Consensus        32 ~~~~d~~~ll~~~~~~~~l~~~la~~~~~~--~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~~~k~~~~~~~~~~~~~~~~  109 (188)
                      ..|+|+..++.+|+.++.+++.+++.+.+.  ++|+|+|++.+|+++|..+|..|++|++++||..+.++..        
T Consensus        68 p~Y~d~~~~l~~p~~~~~l~~~la~~i~~~~~~~DvIvg~~~gGi~~A~~lA~~L~~p~~~vrk~~k~~G~~--------  139 (243)
T 3dez_A           68 PIYTDNRITLSYPETRTLIENGFVETIKEAFPEVEVIAGTATAGIPHGAIIADKMNLPLAYIRSKPKDHGAG--------  139 (243)
T ss_dssp             SEEECTTGGGGCHHHHHHHHHHHHHHHHHHCTTCCEEEEETTTTHHHHHHHHHHTTCCEEEECSSCC-------------
T ss_pred             CEEEeCHHhccCHHHHHHHHHHHHHHHHhhCCCCCEEEEecCchHHHHHHHHHHcCCCEEEEEEeeccCCce--------
Confidence            679999999999999999999999999865  7999999999999999999999999999998876543321        


Q ss_pred             ccceeEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeCh--hhhhccC--CCCeEEEEecccc
Q 029741          110 YGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLP--EGQRRLD--GKPLYILVEPRLS  185 (188)
Q Consensus       110 ~~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~--~~~~~l~--~~~~~~l~~~~~~  185 (188)
                         ..++   +...+|++||||||++|||+|+.++++.|+++|++++++++++++.  .+.++++  |+++++|+++++.
T Consensus       140 ---~~ie---g~~~~Gk~VLIVDDvitTG~Tl~~a~~~L~~~Ga~vv~v~~l~d~~~~~a~e~l~~~gi~~~sL~~~~dl  213 (243)
T 3dez_A          140 ---NQIE---GRVTKGQKMVIIEDLISTGGSVLDAVAAAQREGADVLGVVAIFTYELPKATANFEKASVKLVTLSNYSEL  213 (243)
T ss_dssp             ---CCEE---SCCCTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEECCCHHHHHHHHHHTCCEEESSCHHHH
T ss_pred             ---eEEE---eccCCCCEEEEEEeeccccHHHHHHHHHHHHCCCEEEEEEEEEECCCchHHHHHHhcCCCEEEEeeHHHH
Confidence               1122   4557999999999999999999999999999999999999999985  3777775  9999999999986


Q ss_pred             ccC
Q 029741          186 VNY  188 (188)
Q Consensus       186 ~~~  188 (188)
                      ++|
T Consensus       214 ~~~  216 (243)
T 3dez_A          214 IKV  216 (243)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            543

>1y0b_A Xanthine phosphoribosyltransferase; purine metabolism, STRU genomics, PSI, protein structure initative, midwest center structural genomics; HET: G4P; 1.80A {Bacillus subtilis} SCOP: c.61.1.1 PDB: 2fxv_A*

Probab=99.93  E-value=2.4e-24  Score=168.06  Aligned_cols=169  Identities=20%  Similarity=0.302  Sum_probs=127.2

Q ss_pred             hHHHHhhcccccCCCCCCCceEEe-chhhhcCHHHHHHHHHHHHHHHhcCCCcEEEEeCCCChhhHHHHHHHhCCCeEEE
Q 029741           13 RLQGISKAIRVVPDFPIPGIMFQD-ITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPL   91 (188)
Q Consensus        13 ~~~~~~~~~r~~~~~~~~g~~~~d-~~~ll~~~~~~~~l~~~la~~~~~~~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~~   91 (188)
                      +.+.|.+.-+..++    ++++.| +.+...+|..++.+++.+++.+...++|+|+|++.||+++|..+|..+++|+..+
T Consensus         7 l~~~l~~~~~~~~g----~~l~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~d~Iv~v~~rG~~~a~~la~~l~~p~~~~   82 (197)
T 1y0b_A            7 LKRKIEEEGVVLSD----QVLKVDSFLNHQIDPLLMQRIGDEFASRFAKDGITKIVTIESSGIAPAVMTGLKLGVPVVFA   82 (197)
T ss_dssp             HHHHHHHHCEEETT----TEEECTTTTSSEECHHHHHHHHHHHHHHTTTTTCCEEEEETTTTHHHHHHHHHHHTCCEEEE
T ss_pred             HHHHHhhCCEecCC----CEEEehhhhcccCCHHHHHHHHHHHHHHhhcCCCCEEEEEcccCHHHHHHHHHHhCCCEEEE
Confidence            44555555555555    455533 3334479999999999999999766789999999999999999999999999877


Q ss_pred             eecCCCC--Ccccch-heeeecc-ceeEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeCh--
Q 029741           92 RKPNKLP--GEVISE-AYVLEYG-TDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLP--  165 (188)
Q Consensus        92 ~k~~~~~--~~~~~~-~~~~~~~-~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~--  165 (188)
                      ++..+.+  +..... .++.+.+ ...+.+..+...+|++||||||++|||+|+.++++.|+++|++++.++++++++  
T Consensus        83 rk~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~gk~VllVDDvitTG~Tl~~a~~~L~~~Ga~~V~~~~l~~~~~~  162 (197)
T 1y0b_A           83 RKHKSLTLTDNLLTASVYSFTKQTESQIAVSGTHLSDQDHVLIIDDFLANGQAAHGLVSIVKQAGASIAGIGIVIEKSFQ  162 (197)
T ss_dssp             BSSCCSSCCSSEEEEEEEETTTTEEEEEEEEGGGCCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEEETTS
T ss_pred             EecCCCCCCCceEEEeeeccccCceEEEEEeccccCCcCEEEEEEcccccCHHHHHHHHHHHHCCCEEEEEEEEEEeccc
Confidence            7665433  222111 1111111 124444433445899999999999999999999999999999999999999987  


Q ss_pred             hhhhccC--CCCeEEEEecccc
Q 029741          166 EGQRRLD--GKPLYILVEPRLS  185 (188)
Q Consensus       166 ~~~~~l~--~~~~~~l~~~~~~  185 (188)
                      .++++|+  +.++++|+++++.
T Consensus       163 ~~~~~l~~~~~~~~sl~~~~~i  184 (197)
T 1y0b_A          163 PGRDELVKLGYRVESLARIQSL  184 (197)
T ss_dssp             THHHHHHHTTCCEEEEEEEEEC
T ss_pred             chhhhHHhcCCcEEEEEEEEEe
Confidence            3777886  7899999998863

>1o57_A PUR operon repressor; purine operon repressor, helix-turn-helix domain, phosphoribosyltranseferases, domain recombination, DNA binding; HET: EPE P6G 2PE PG4 1PE; 2.20A {Bacillus subtilis} SCOP: a.4.5.40 c.61.1.1 PDB: 1p4a_A*

Probab=99.92  E-value=1.9e-24  Score=178.22  Aligned_cols=169  Identities=21%  Similarity=0.347  Sum_probs=128.1

Q ss_pred             hHHHHhhcccccCCCCCCCceEEechhhhcCHHHHHHHHHHHHHHHhcCCCcEEEEeCCCChhhHHHHHHHhCCCeEEEe
Q 029741           13 RLQGISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLR   92 (188)
Q Consensus        13 ~~~~~~~~~r~~~~~~~~g~~~~d~~~ll~~~~~~~~l~~~la~~~~~~~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~~~   92 (188)
                      +|+.|.+.++..+-+- +| .|.++..++.+|..++.+++.+++.+.+.++|+|+|++.+|+++|..+|..|++|+++++
T Consensus        83 ~~~~l~~~l~~~~~v~-~G-~f~~~~~ll~~p~l~~~la~~la~~~~~~~~d~Iv~V~~rG~~~A~~lA~~L~vp~v~~r  160 (291)
T 1o57_A           83 FVQTLGQSLANPERIL-PG-GYVYLTDILGKPSVLSKVGKLFASVFAEREIDVVMTVATKGIPLAYAAASYLNVPVVIVR  160 (291)
T ss_dssp             HHHHHHHHHTCGGGEE-TT-TEECCTTTTTCHHHHHHHHHHHHHHTTTSCCSEEEEETTTTHHHHHHHHHHHTCCEEEEB
T ss_pred             HHHHHHHHHHHCCCcc-cC-CeEEehhhhCCHHHHHHHHHHHHHHhhccCCCEEEEECCCCHHHHHHHHHHhCCCEEEEE
Confidence            4555555554432211 23 256788999999999999999999998778899999999999999999999999998887


Q ss_pred             ecCCC-CCcccchheeeec-c-ceeEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChhhhh
Q 029741           93 KPNKL-PGEVISEAYVLEY-G-TDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQR  169 (188)
Q Consensus        93 k~~~~-~~~~~~~~~~~~~-~-~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~~~~  169 (188)
                      |..+. ++.....++.... + ...+.+......+|++||||||++|||+|+.++++.|+++||+++++++++++.++++
T Consensus       161 k~~~~t~~~~~~~~~~~g~~~~~~~~~l~~~~l~~Gk~VLIVDDViTTG~Tl~~a~~~L~~aGA~vV~v~vlvdr~~~~~  240 (291)
T 1o57_A          161 KDNKVTEGSTVSINYVSGSSNRIQTMSLAKRSMKTGSNVLIIDDFMKAGGTINGMINLLDEFNANVAGIGVLVEAEGVDE  240 (291)
T ss_dssp             CC-----CCEEEEEEECSSCCSEEEEEEEGGGSCTTCEEEEEEEEESSSHHHHHHHHHTGGGTCEEEEEEEEEEESSCTT
T ss_pred             EeccCCCCceeeeeeecccccceeeEEEecccCCCcCEEEEEEEEcCcHHHHHHHHHHHHHCCCEEEEEEEEEEcCcccc
Confidence            66543 2222222221111 1 1245555444569999999999999999999999999999999999999999987655


Q ss_pred             ccCCCCeEEEEeccc
Q 029741          170 RLDGKPLYILVEPRL  184 (188)
Q Consensus       170 ~l~~~~~~~l~~~~~  184 (188)
                      ++ +.|++||+++++
T Consensus       241 ~l-~~~~~SL~~~~~  254 (291)
T 1o57_A          241 RL-VDEYMSLLTLST  254 (291)
T ss_dssp             SC-CSCCEEEEEEEC
T ss_pred             cc-CCceEEEEEEcc
Confidence            55 579999999876

>2yzk_A OPRT, oprtase, orotate phosphoribosyltransferase; rossmann fold, glycosyltransferase, magnesium, pyrimidine biosynthesis, structural genomics; 1.80A {Aeropyrum pernix}

Probab=99.92  E-value=1.5e-24  Score=166.95  Aligned_cols=141  Identities=22%  Similarity=0.366  Sum_probs=119.0

Q ss_pred             ceEEechhhhcCHHHHHHHHHHHHHHH-hcC-CCcEEEEeCCCChhhHHHHHHHhCCCeEEEeecCCCCCcccchheeee
Q 029741           32 IMFQDITTLLLDHKAFKDTVDIFVDRY-RDM-GISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLE  109 (188)
Q Consensus        32 ~~~~d~~~ll~~~~~~~~l~~~la~~~-~~~-~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~~~k~~~~~~~~~~~~~~~~  109 (188)
                      ..|.|+..++.+|+..+.+++.+++.+ .+. ++|+|+|++.||+++|..+|..+++|+.+.++..+..+.         
T Consensus        26 ~~f~d~~~l~~~~~~~~~l~~~l~~~~~~~~~~~~~iv~v~~~G~~~a~~la~~l~~p~~~~r~~~~~~g~---------   96 (178)
T 2yzk_A           26 SVYIDMRRLLGDESSYSVALDLLLEVGGQDLARSSAVIGVATGGLPWAAMLALRLSKPLGYVRPERKGHGT---------   96 (178)
T ss_dssp             EEEECGGGGTTCHHHHHHHHHHHHHHHHHHHHHCSEEEEETTTTHHHHHHHHHHHTCCEEEECCCCTTSCC---------
T ss_pred             CeEEEChHhccCHHHHHHHHHHHHHHHhcccCCCCEEEEecccchHHHHHHHHHHCCCEEEEEccccccCc---------
Confidence            569999999999999999999999988 654 689999999999999999999999999887665421110         


Q ss_pred             ccceeEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChh-hhhccC--CCCeEEEEeccccc
Q 029741          110 YGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE-GQRRLD--GKPLYILVEPRLSV  186 (188)
Q Consensus       110 ~~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~-~~~~l~--~~~~~~l~~~~~~~  186 (188)
                        ...+   .+. .+|++||||||++|||+|+.++++.|+++|++++.+++++++++ +.++++  ++|+++|+++++.+
T Consensus        97 --~~~i---~~~-~~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~~l~~r~~~~~~~l~~~g~~~~sl~~~~~~~  170 (178)
T 2yzk_A           97 --LSQV---EGD-PPKGRVVVVDDVATTGTSIAKSIEVLRSNGYTVGTALVLVDRGEGAGELLARMGVRLVSVATLKTIL  170 (178)
T ss_dssp             --CCCC---BTC-CCSSEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEECCSSHHHHHHTTTCEEEEEEEHHHHH
T ss_pred             --ccee---ccc-CCCCEEEEEEeccCCcHHHHHHHHHHHHcCCeEEEEEEEEEcCcCHHHHHHHcCCcEEEEeeHHHHH
Confidence              0011   134 49999999999999999999999999999999999999999865 677775  89999999999865


Q ss_pred             c
Q 029741          187 N  187 (188)
Q Consensus       187 ~  187 (188)
                      +
T Consensus       171 ~  171 (178)
T 2yzk_A          171 E  171 (178)
T ss_dssp             H
T ss_pred             H
Confidence            4

>2wns_A Orotate phosphoribosyltransferase; alternative splicing, multifunctional enzyme, lyase, polymorphism, decarboxylase, phosphoprotein; HET: OMP; 1.90A {Homo sapiens}

Probab=99.92  E-value=2.3e-24  Score=169.46  Aligned_cols=143  Identities=20%  Similarity=0.371  Sum_probs=120.7

Q ss_pred             ceEEechhhhcCHHHHHHHHHHHHHHHhc--CCCcEEEEeCCCChhhHHHHHHHhCCCeEEEeecCCCCCcccchheeee
Q 029741           32 IMFQDITTLLLDHKAFKDTVDIFVDRYRD--MGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLE  109 (188)
Q Consensus        32 ~~~~d~~~ll~~~~~~~~l~~~la~~~~~--~~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~~~k~~~~~~~~~~~~~~~~  109 (188)
                      ..|.|+..++.+|+..+.+++.+++.+..  .++|+|+|++.+|+++|..+|..+++|+.+.||..+..+.         
T Consensus        30 ~~y~d~~~l~~~~~~~~~l~~~la~~i~~~~~~~d~Iv~v~~~g~~~a~~la~~l~~p~~~~rk~~k~~g~---------  100 (205)
T 2wns_A           30 PIYIDLRGIVSRPRLLSQVADILFQTAQNAGISFDTVCGVPYTALPLATVICSTNQIPMLIRRKETKDYGT---------  100 (205)
T ss_dssp             EEEECGGGGGGSHHHHHHHHHHHHHHHHHTTCCCSEEEECTTTTHHHHHHHHHHHTCCEEEECCTTTTSSS---------
T ss_pred             CEEEeChHhcCCHHHHHHHHHHHHHHHHhhCCCCCEEEEcCCchHHHHHHHHHHHCcCEEEEecCcCccCc---------
Confidence            67899999999999999999999999875  4789999999999999999999999999887664421110         


Q ss_pred             ccceeEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChh-hhhccC--CCCeEEEEeccccc
Q 029741          110 YGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE-GQRRLD--GKPLYILVEPRLSV  186 (188)
Q Consensus       110 ~~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~-~~~~l~--~~~~~~l~~~~~~~  186 (188)
                        ...+   .+...+|++||||||++|||+|+.++++.|+++|++++++++++++.. +.++++  |.|+++|+++++..
T Consensus       101 --~~~~---~g~~~~gk~VliVDDvitTG~Tl~~a~~~L~~~Ga~~v~~~~l~~~~~~~~~~l~~~g~~v~sl~~~~~~~  175 (205)
T 2wns_A          101 --KRLV---EGTINPGETCLIIEDVVTSGSSVLETVEVLQKEGLKVTDAIVLLDREQGGKDKLQAHGIRLHSVCTLSKML  175 (205)
T ss_dssp             --CCSE---ESCCCTTCBEEEEEEEESSSHHHHHHHHHHHHTTCBCCEEEEEEECCSSHHHHHHTTTCEEEEEEEHHHHH
T ss_pred             --cccc---cCCCCCCCEEEEEEEeccccHHHHHHHHHHHHCCCEEEEEEEEEEcCcchHHHHHHcCCeEEEEEEHHHHH
Confidence              1112   144568999999999999999999999999999999999999999974 667774  89999999998755


Q ss_pred             cC
Q 029741          187 NY  188 (188)
Q Consensus       187 ~~  188 (188)
                      +|
T Consensus       176 ~~  177 (205)
T 2wns_A          176 EI  177 (205)
T ss_dssp             HH
T ss_pred             HH
Confidence            43

>3mjd_A Orotate phosphoribosyltransferase; IDP02311, csgid, structural genomics, center for structural genomics of infectious diseases; 1.90A {Francisella tularensis}

Probab=99.92  E-value=1.8e-24  Score=172.81  Aligned_cols=143  Identities=16%  Similarity=0.227  Sum_probs=116.5

Q ss_pred             CceEEechhhhcCHHHHHHHHHHHHHHHhcC--CCcEEEEeCCCChhhHHHHHHHh------CCCeEEEeecCCCCCccc
Q 029741           31 GIMFQDITTLLLDHKAFKDTVDIFVDRYRDM--GISVVAGIEARGFVFGPSIALAI------GAKFVPLRKPNKLPGEVI  102 (188)
Q Consensus        31 g~~~~d~~~ll~~~~~~~~l~~~la~~~~~~--~~d~Iv~v~~gG~~~a~~lA~~l------~~p~~~~~k~~~~~~~~~  102 (188)
                      +..|+|.. ++.+|..+..+++.+++.+.+.  ++|+|+|++.+|+++|..+|..|      ++|++++||..+..+.  
T Consensus        49 Sp~y~d~~-~~~~p~~~~~l~~~la~~i~~~~~~~D~Ivg~~~gGi~~A~~lA~~L~~~~g~~~p~~~~RK~~k~~g~--  125 (232)
T 3mjd_A           49 SPYFFNAG-LFNTGAQLATLADYYAQLIIKSDVKYDILFGPAYKGIPLVAAISTVLALKYNIDMPYAFDRKEAKDHGE--  125 (232)
T ss_dssp             EEEEECGG-GCCBHHHHHHHHHHHHHHHHHCCCCCSEEEECTTTHHHHHHHHHHHHHHHHCCCCBEEEECCC--------
T ss_pred             cceEeccc-ccCCHHHHHHHHHHHHHHHHhcCCCCCEEEEecCCcHHHHHHHHHHHhhhcCCCCcEEEEEeecccCCC--
Confidence            36889985 6789999999999999999764  68999999999999999999997      8999998876543221  


Q ss_pred             chheeeeccceeEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChh-hh--------hccC-
Q 029741          103 SEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE-GQ--------RRLD-  172 (188)
Q Consensus       103 ~~~~~~~~~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~-~~--------~~l~-  172 (188)
                               ...+.   +...+|++||||||++|||+|+.++++.|+++|++++++++++++.+ ++        +.+. 
T Consensus       126 ---------~~~i~---g~~~~Gk~VLIVDDVitTG~Tl~~a~~~L~~~Ga~vv~v~vlvdr~e~g~~~~~~a~~~~~~~  193 (232)
T 3mjd_A          126 ---------GGVFV---GADMTNKKVLLIDDVMTAGTAFYESYNKLKIINAKIAGVVLSIDRQEKAKDSDISATKKISQD  193 (232)
T ss_dssp             ----------CCEE---ESCCTTCEEEEECSCCSSSHHHHHHHHHHHTTTCEEEEEEEEEECCBCCTTSSSCHHHHHHHH
T ss_pred             ---------CceEe---ccCCCCCEEEEEEeeccccHHHHHHHHHHHHCCCEEEEEEEEEECCcCCccccchhHHHHHHH
Confidence                     01122   33459999999999999999999999999999999999999999876 33        3332 


Q ss_pred             -CCCeEEEEeccccccC
Q 029741          173 -GKPLYILVEPRLSVNY  188 (188)
Q Consensus       173 -~~~~~~l~~~~~~~~~  188 (188)
                       |+|++||+++++.+.|
T Consensus       194 ~gv~v~sL~~~~~l~~~  210 (232)
T 3mjd_A          194 FNIPVLAVTNFESIFEY  210 (232)
T ss_dssp             HCCCEEEEEEHHHHHHH
T ss_pred             cCCcEEEEEeHHHHHHH
Confidence             9999999999875543

>2p1z_A Phosphoribosyltransferase; STRU genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 2.44A {Corynebacterium diphtheriae}

Probab=99.92  E-value=3.4e-24  Score=165.36  Aligned_cols=141  Identities=24%  Similarity=0.281  Sum_probs=115.2

Q ss_pred             CceEEechhhhcCHHHHHHHHHHHHHHHhcCCCcEEEEeCCCChhhHHHHHHHhCCCe--EEEeecCCCCCcccchheee
Q 029741           31 GIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKF--VPLRKPNKLPGEVISEAYVL  108 (188)
Q Consensus        31 g~~~~d~~~ll~~~~~~~~l~~~la~~~~~~~~d~Iv~v~~gG~~~a~~lA~~l~~p~--~~~~k~~~~~~~~~~~~~~~  108 (188)
                      +..|+|+..++.+|+..+.+++.+++.+.+.++|+|+|++.+|+++|..+|..++.|+  .++|+..+..+.        
T Consensus        32 s~~y~d~~~~~~~~~~~~~l~~~la~~i~~~~~d~vv~v~~gG~~~a~~la~~l~~~~~~~~~rk~~~~~g~--------  103 (180)
T 2p1z_A           32 ADYYVDLRRATLHARASRLIGELLRELTADWDYVAVGGLTLGADPVATSVMHADGREIHAFVVRKEAKKHGM--------  103 (180)
T ss_dssp             ---CCCTHHHHTSHHHHHHHHHHHHHTTTTSCCSEEEEETTTHHHHHHHHHHSSSSCCEEEEECSCCC-CC---------
T ss_pred             CCEEEEChhhcCCHHHHHHHHHHHHHHHhhcCCCEEEEecCCCHHHHHHHHHHHCCCCCeEEEEeccccccc--------
Confidence            3679999999999999999999999999877889999999999999999999999765  445543321110        


Q ss_pred             eccceeEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChh-hhhccC--CCCeEEEEecccc
Q 029741          109 EYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE-GQRRLD--GKPLYILVEPRLS  185 (188)
Q Consensus       109 ~~~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~-~~~~l~--~~~~~~l~~~~~~  185 (188)
                         ...+.   +...+|++||||||++|||+|+.++++.|+++|++++.+++++++++ ++++++  |+|++||+++++.
T Consensus       104 ---~~~~~---g~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~~l~~~~~~g~~~l~~~g~~~~sl~~~~~l  177 (180)
T 2p1z_A          104 ---QRRIE---GPDVVGKKVLVVEDTTTTGNSPLTAVKALREAGAEVVGVATVVDRATGAADVIAAEGLEYRYILGLEDL  177 (180)
T ss_dssp             ---CCSEE---SSCCTTCEEEEEEEECSSSHHHHHHHHHHHHHTCEEEEEEEEEC-CCCHHHHHHTTTCCEEEEECSTTT
T ss_pred             ---hhhcc---CCCCCcCEEEEEEeccCCcHHHHHHHHHHHHcCCeEEEEEEEEEcCcchHHHHHhcCCeEEEEEEHHHh
Confidence               01121   34469999999999999999999999999999999999999999977 677774  8999999999874

>3qw4_B UMP synthase; N-terminal orotidine monophosphate decarboxylase domain C-TE orotate phosphoribosyltransferase domain, transferase, LYAS; HET: U5P; 3.00A {Leishmania donovani}

Probab=99.91  E-value=9.6e-24  Score=183.29  Aligned_cols=165  Identities=20%  Similarity=0.279  Sum_probs=134.2

Q ss_pred             CCCCChhHHHHhhccc-ccCCCC-CCC---ceEEechhhhcCHHHHHHHHHHHHHHHhcCCCcEEEEeCCCChhhHHHHH
Q 029741            7 GLRGDPRLQGISKAIR-VVPDFP-IPG---IMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIA   81 (188)
Q Consensus         7 ~~~~~~~~~~~~~~~r-~~~~~~-~~g---~~~~d~~~ll~~~~~~~~l~~~la~~~~~~~~d~Iv~v~~gG~~~a~~lA   81 (188)
                      -|.....++.+.+.-. ..+.|+ ..|   ..|+|+..++.+|+.++.+++.+++.+.+.++|+|+|++.+|+++|..+|
T Consensus       256 ~~~~~~~~~~l~~~~a~~~g~F~L~SG~~S~~y~D~~~l~~~p~~~~~l~~~la~~~~~~~~D~Ivg~~~gGi~~A~~lA  335 (453)
T 3qw4_B          256 KGASVELAKALVDSHCVRFGNFTLKSGKSSPIYIDLRRLVTYPAIMRLVAREYAKVLRHYKFDRIAGLPYAALPIASAIS  335 (453)
T ss_dssp             CSCCHHHHHHHHHTTSEEESCCBCTTSSBCSEEECCGGGGGCHHHHHHHHHHHHHHHTTSCCSEEEECTTTTHHHHHHHH
T ss_pred             ccHHHHHHHHHHHCCCCEECCEeccCCCcCCEEEechHhccCHHHHHHHHHHHHHHhccCCCCEEEeccCCcHHHHHHHH
Confidence            3445555666665553 336777 344   57999999999999999999999999987789999999999999999999


Q ss_pred             HHhCCCeEEEeecCCCCCcccchheeeeccce-eEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEE
Q 029741           82 LAIGAKFVPLRKPNKLPGEVISEAYVLEYGTD-RLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECAC  160 (188)
Q Consensus        82 ~~l~~p~~~~~k~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~  160 (188)
                      ..|++|++++||..+..            +.. .+   .+...+|++||||||++|||+|+.++++.|+++|++++++++
T Consensus       336 ~~L~~p~~~~rk~~k~~------------g~~~~i---~g~~~~G~~VliVDDvitTG~T~~~~~~~l~~~g~~vv~v~~  400 (453)
T 3qw4_B          336 NEMNVPLIYPRREAKIY------------GTKAAI---EGEYKKGDRVVIIDDLVSTGETKVEAIEKLRSAGLEVVSIVV  400 (453)
T ss_dssp             HHHCCCEEEESSCC-------------------CE---ESCCCTTCEEEEEEEEECC-CCHHHHHHHHHTTTCEEEEEEE
T ss_pred             HHhCCCEEEEEeecccc------------CcCceE---ecccCCCCEEEEEeeeechhHHHHHHHHHHHHcCCEEEEEEE
Confidence            99999999988765421            111 12   144569999999999999999999999999999999999999


Q ss_pred             EeeChh-hhhccC--CCCeEEEEeccccc
Q 029741          161 VVGLPE-GQRRLD--GKPLYILVEPRLSV  186 (188)
Q Consensus       161 l~~~~~-~~~~l~--~~~~~~l~~~~~~~  186 (188)
                      ++++.. ++++++  |+|++||+++++.+
T Consensus       401 lvdr~~~g~~~l~~~g~~v~sL~~~~dl~  429 (453)
T 3qw4_B          401 LVDRDMGAKAFLNKLGYDFEAVVGLHQLL  429 (453)
T ss_dssp             EEECSSSHHHHHHHTTCCEEEEEEHHHHH
T ss_pred             EEECCcchHHHHHhcCCCEEEEeEHHHHH
Confidence            999976 677774  99999999999854

>1lh0_A OMP synthase; loop closure, monomer closure, orotate phosphoribosyltransferase; HET: ORO PRP; 2.00A {Salmonella typhimurium} SCOP: c.61.1.1 PDB: 1opr_A* 1sto_A* 1oro_A

Probab=99.91  E-value=9.1e-24  Score=167.03  Aligned_cols=140  Identities=17%  Similarity=0.299  Sum_probs=117.0

Q ss_pred             ceEEechhhhcCHHHHHHHHHHHHHHHhcC--CCcEEEEeCCCChhhHHHHHHHh------CCCeEEEeecCCCCCcccc
Q 029741           32 IMFQDITTLLLDHKAFKDTVDIFVDRYRDM--GISVVAGIEARGFVFGPSIALAI------GAKFVPLRKPNKLPGEVIS  103 (188)
Q Consensus        32 ~~~~d~~~ll~~~~~~~~l~~~la~~~~~~--~~d~Iv~v~~gG~~~a~~lA~~l------~~p~~~~~k~~~~~~~~~~  103 (188)
                      ..|+| ..++.+|+.++.+++.+++++.+.  ++|+|+|++.+|+++|..+|..|      ++|++++||..+.++.   
T Consensus        32 ~~y~d-~~ll~~~~~~~~~~~~la~~i~~~~~~~d~Ivgv~~~G~~~a~~lA~~L~~~~~~~~~~~~~rk~~~~~~~---  107 (213)
T 1lh0_A           32 PYFFN-AGLFNTGRDLALLGRFYAEALVDSGIEFDLLFGPAYKGIPIATTTAVALAEHHDKDLPYCFNRKEAKDHGE---  107 (213)
T ss_dssp             EEEEC-GGGCCBHHHHHHHHHHHHHHHHHHCCCCSEEECCTTTHHHHHHHHHHHHHHHHCCCCBEEEECSSCCSSTT---
T ss_pred             cEEEe-cCccCCHHHHHHHHHHHHHHHHHhCCCCCEEEEcCCCcHHHHHHHHHHHHHhhCCCCCEEEEEeccCccCC---
Confidence            67889 578899999999999999999753  68999999999999999999999      8999888775542221   


Q ss_pred             hheeeeccceeEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChh-hhhcc---------CC
Q 029741          104 EAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE-GQRRL---------DG  173 (188)
Q Consensus       104 ~~~~~~~~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~-~~~~l---------~~  173 (188)
                              ...+.   +...+| +||||||++|||+|+.++++.|+++|++++++++++++.+ +++++         .|
T Consensus       108 --------~~~~~---g~~~~g-~VliVDDvitTG~Tl~~a~~~l~~~Ga~~v~v~~l~dr~~~g~~~l~~~~~~~~~~g  175 (213)
T 1lh0_A          108 --------GGSLV---GSALQG-RVMLVDDVITAGTAIRESMEIIQAHGATLAGVLISLDRQERGRGEISAIQEVERDYG  175 (213)
T ss_dssp             --------CSSEE---ESCCCS-EEEEECSCCSSSCHHHHHHHHHHHTTCEEEEEEEEEECCBBCSSSSBHHHHHHHHHC
T ss_pred             --------CCcee---CCCCCC-CEEEEEecccchHHHHHHHHHHHHCCCeEEEEEEEEEcccCcccchhhHHHHHHHcC
Confidence                    01122   234589 9999999999999999999999999999999999999987 55555         48


Q ss_pred             CCeEEEEecccccc
Q 029741          174 KPLYILVEPRLSVN  187 (188)
Q Consensus       174 ~~~~~l~~~~~~~~  187 (188)
                      +|++||+++++..+
T Consensus       176 ~~v~sl~~~~~l~~  189 (213)
T 1lh0_A          176 CKVISIITLKDLIA  189 (213)
T ss_dssp             CEEEEEEEHHHHHH
T ss_pred             CCeEEEEEHHHHHH
Confidence            99999999997544

>3n2l_A OPRT, oprtase, orotate phosphoribosyltransferase; pyrimidine ribonucleotide biosynthesis, infectious diseases; 2.10A {Vibrio cholerae}

Probab=99.90  E-value=1.3e-23  Score=168.20  Aligned_cols=141  Identities=19%  Similarity=0.311  Sum_probs=114.5

Q ss_pred             ceEEechhhhcCHHHHHHHHHHHHHHHhcC--CCcEEEEeCCCChhhHHHHHHHh------CCCeEEEeecCCCCCcccc
Q 029741           32 IMFQDITTLLLDHKAFKDTVDIFVDRYRDM--GISVVAGIEARGFVFGPSIALAI------GAKFVPLRKPNKLPGEVIS  103 (188)
Q Consensus        32 ~~~~d~~~ll~~~~~~~~l~~~la~~~~~~--~~d~Iv~v~~gG~~~a~~lA~~l------~~p~~~~~k~~~~~~~~~~  103 (188)
                      ..|+|. .++.+|..++.+++.+++.+.+.  ++|+|+|++.+|+++|..+|..|      ++|++++||..+.++.   
T Consensus        57 p~y~d~-~ll~~p~~l~~l~~~la~~i~~~~~~~D~Vvg~~~gGi~~A~~lA~~L~~~~g~~vp~~~~RK~~k~~g~---  132 (238)
T 3n2l_A           57 PYFFNA-GLFNTGRDLARLGRFYAAALVDSGIEFDVLFGPAYKGIPIATTTAVALADHHDVDTPYCFNRKEAKNHGE---  132 (238)
T ss_dssp             EEEECG-GGCCBHHHHHHHHHHHHHHHHHHTCCCSEEEECTTTHHHHHHHHHHHHHHHSCCCCBEEEECCC---------
T ss_pred             cEEEEC-CCCCCHHHHHHHHHHHHHHHHhhCCCCCEEEecccChHHHHHHHHHHHhHhhCCCccEEEEeeccCCCCC---
Confidence            688997 57799999999999999999754  79999999999999999999997      8999998887653322   


Q ss_pred             hheeeeccceeEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChh-hhh------cc---CC
Q 029741          104 EAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE-GQR------RL---DG  173 (188)
Q Consensus       104 ~~~~~~~~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~-~~~------~l---~~  173 (188)
                              ...+.   +...+| +||||||++|||+|+.++++.|+++|++++++++++++.+ +++      ++   .|
T Consensus       133 --------~~~i~---G~~~~G-~VliVDDvitTG~T~~~a~~~l~~~Ga~vv~v~vlvdr~egG~~~l~a~~~~~~~~G  200 (238)
T 3n2l_A          133 --------GGNLV---GSKLEG-RVMLVDDVITAGTAIRESMELIQANKADLAGVLVAIDRQEKGKGELSAIQEVERDFG  200 (238)
T ss_dssp             ----------CEE---ESCCCS-EEEEECSCCSSSHHHHHHHHHHHHTTCEEEEEEEEEECCCBCSSSSBHHHHHHHHHC
T ss_pred             --------CceEe---ccccCC-cEEEEeeeecccHHHHHHHHHHHHcCCEEEEEEEEEEcccCccchhhHHHHHHHHcC
Confidence                    11222   334589 9999999999999999999999999999999999999875 222      23   29


Q ss_pred             CCeEEEEeccccccC
Q 029741          174 KPLYILVEPRLSVNY  188 (188)
Q Consensus       174 ~~~~~l~~~~~~~~~  188 (188)
                      +|++||+++++.+.|
T Consensus       201 v~v~SL~~~~~l~~~  215 (238)
T 3n2l_A          201 CAVISIVSLTDLITY  215 (238)
T ss_dssp             CEEEEEEEHHHHHHH
T ss_pred             CCEEEEEEHHHHHHH
Confidence            999999999886543

>2ps1_A Orotate phosphoribosyltransferase 1; alpha beta, oprtase-OA-PRPP complex; HET: ORO PRP; 1.75A {Saccharomyces cerevisiae} PDB: 2pry_A* 2prz_A*

Probab=99.90  E-value=3.1e-23  Score=165.33  Aligned_cols=142  Identities=18%  Similarity=0.268  Sum_probs=117.0

Q ss_pred             ceEEechhhhcCHHHHHHHHHHHHHHHhcC--CCcEEEEeCCCChhhHHHHHHHh---------CCCeEEEeecCCCCCc
Q 029741           32 IMFQDITTLLLDHKAFKDTVDIFVDRYRDM--GISVVAGIEARGFVFGPSIALAI---------GAKFVPLRKPNKLPGE  100 (188)
Q Consensus        32 ~~~~d~~~ll~~~~~~~~l~~~la~~~~~~--~~d~Iv~v~~gG~~~a~~lA~~l---------~~p~~~~~k~~~~~~~  100 (188)
                      ..|+| ..++.+|+.++.+++.|++.+.+.  ++|+|++|+.+|+++|..+|..|         ++|+.+.++.++..  
T Consensus        36 ~~y~d-~~ll~~~~~~~~l~~~la~~i~~~~~~~d~Vvg~~~~G~~~a~~lA~~L~~~~~~~~~~~p~~~~rk~~k~~--  112 (226)
T 2ps1_A           36 PYFFN-LGLFNTGKLLSNLATAYAIAIIQSDLKFDVIFGPAYKGIPLAAIVCVKLAEIGGSKFQNIQYAFNRKEAKDH--  112 (226)
T ss_dssp             EEEEC-GGGCCBHHHHHHHHHHHHHHHHHHTCCCSEEEECTTTHHHHHHHHHHHHHHHSTTTTTTCEEEEEEEEEESS--
T ss_pred             CEEEe-cCccCCHHHHHHHHHHHHHHHHHhCCCCCEEEEeccCCHHHHHHHHHHHHhhhccccCCCCEEEEechhhhc--
Confidence            67888 468899999999999999999753  68999999999999999999999         99998887754321  


Q ss_pred             ccchheeeeccceeEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChh-hhh----c-----
Q 029741          101 VISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE-GQR----R-----  170 (188)
Q Consensus       101 ~~~~~~~~~~~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~-~~~----~-----  170 (188)
                                +...+..  +...+|++||||||++|||+|+.++++.|+++|++++++++++++.+ +++    +     
T Consensus       113 ----------g~~~~~~--~~~i~Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga~~v~v~~l~dr~~~g~~~~~~~~~~~~  180 (226)
T 2ps1_A          113 ----------GEGGIIV--GSALENKRILIIDDVMTAGTAINEAFEIISNAKGQVVGSIIALDRQEVVSTDDKEGLSATQ  180 (226)
T ss_dssp             ----------TTCEEEE--ESCCTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEECCBBSCTTCSSCCBHHH
T ss_pred             ----------CCCceEe--cCCCCcCEEEEEEecccChHHHHHHHHHHHHcCCeEEEEEEEEEccCcccccccccchHHH
Confidence                      1222222  23359999999999999999999999999999999999999999986 332    1     


Q ss_pred             ----cCCCCeEEEEeccccccC
Q 029741          171 ----LDGKPLYILVEPRLSVNY  188 (188)
Q Consensus       171 ----l~~~~~~~l~~~~~~~~~  188 (188)
                          ..|+|++||+++++.++|
T Consensus       181 ~~~~~~g~~v~sl~~~~~l~~~  202 (226)
T 2ps1_A          181 TVSKKYGIPVLSIVSLIHIITY  202 (226)
T ss_dssp             HHHHHHTCCEEEEEEHHHHHHH
T ss_pred             HHHHhcCCeEEEEecHHHHHHH
Confidence                349999999999986543

>2aee_A OPRT, oprtase, orotate phosphoribosyltransferase; structural genomics, PSI, structure initiative; 1.95A {Streptococcus pyogenes} SCOP: c.61.1.1

Probab=99.89  E-value=7.5e-23  Score=161.42  Aligned_cols=139  Identities=24%  Similarity=0.363  Sum_probs=116.9

Q ss_pred             ceEEechhhhcCHHHHHHHHHHHHHHHhcC--CCcEEEEeCCCChhhHHHHHHHhCCCeEEEeecCCCCCcccchheeee
Q 029741           32 IMFQDITTLLLDHKAFKDTVDIFVDRYRDM--GISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLE  109 (188)
Q Consensus        32 ~~~~d~~~ll~~~~~~~~l~~~la~~~~~~--~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~~~k~~~~~~~~~~~~~~~~  109 (188)
                      ..|+|+..++.+|...+.+++.+++++...  ++|+|+|++.||+++|..+|..+++|+.+++|.++.++.         
T Consensus        36 ~~~~D~~~l~~~~~~~~~~~~~la~~i~~~~~~~d~vv~v~~~g~~~a~~la~~l~~p~~~~rk~~~~~g~---------  106 (211)
T 2aee_A           36 PIYTDNRVTLSYPKTRDLIENGFVETIKAHFPEVEVIAGTATAGIPHGAIIADKMTLPFAYIRSKPKDHGA---------  106 (211)
T ss_dssp             SEEECGGGGGGCHHHHHHHHHHHHHHHHHHCTTCCEEEEETTTTHHHHHHHHHHHTCCEEEECSSCC-------------
T ss_pred             CeEEeChhhcCCHHHHHHHHHHHHHHHHhhCCCCCEEEEeccCcHHHHHHHHHHhCCCEEEEEeecCCcCC---------
Confidence            478999999999999999999999988653  679999999999999999999999999888776542221         


Q ss_pred             ccceeEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeCh--hhhhccC--CCCeEEEEeccc
Q 029741          110 YGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLP--EGQRRLD--GKPLYILVEPRL  184 (188)
Q Consensus       110 ~~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~--~~~~~l~--~~~~~~l~~~~~  184 (188)
                        ...+.   +...+|++||||||++|||+|+.++++.|+++|+++++++++++++  ++.+++.  +++++++.++.+
T Consensus       107 --~~~i~---g~~~~gk~VliVDDvitTG~Tl~~a~~~L~~~Ga~~v~v~~l~~~~~~~~~~~l~~~~~~~~~l~~~~~  180 (211)
T 2aee_A          107 --GNQIE---GRVLKGQKMVIIEDLISTGGSVLDAAAAASREGADVLGVVAIFTYELPKASQNFKEAGIKLITLSNYTE  180 (211)
T ss_dssp             --CCSEE---SCCCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEECCCHHHHHHHHHHTCCEEESCCHHH
T ss_pred             --cceec---CCCCCcCEEEEEeecccchHHHHHHHHHHHHCCCcEEEEEEEEecccccHHHHHHhCCCCEEEEeeHHH
Confidence              01222   3446999999999999999999999999999999999999999985  3777775  889999988754

>3hvu_A Hypoxanthine phosphoribosyltransferase; hypoxanthine-guanine phosphoribosyltransferase, 2-(N-morphol ethanesulfonic acid (MES), IDP01892; HET: MES; 1.95A {Bacillus anthracis str} PDB: 3h83_A* 3kb8_A*

Probab=99.85  E-value=3.3e-20  Score=145.53  Aligned_cols=153  Identities=17%  Similarity=0.214  Sum_probs=113.5

Q ss_pred             cCCCCCCCceEEechhhhcCHHHHHHHHHHHHHHHhcC---CCcEEEEeCCCChhhHHHHHHHhCCCe--EEEeecCCCC
Q 029741           24 VPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRDM---GISVVAGIEARGFVFGPSIALAIGAKF--VPLRKPNKLP   98 (188)
Q Consensus        24 ~~~~~~~g~~~~d~~~ll~~~~~~~~l~~~la~~~~~~---~~d~Iv~v~~gG~~~a~~lA~~l~~p~--~~~~k~~~~~   98 (188)
                      -|.||.+|++..|+..++.+++.++..++.|++++.+.   ++++|+|++.||+.+|..+|..|++|+  .++++.+...
T Consensus        17 ~~~f~~~~~~~~di~~~l~s~~~i~~~i~~LA~~I~~~~~~~~~vVVgi~~GG~~~a~~La~~L~~p~~~~~i~~~~Y~~   96 (204)
T 3hvu_A           17 NLYFQSNAMMNQDIEKVLISEEQIQEKVLELGAIIAEDYKNTVPLAIGVLKGAMPFMADLLKRTDTYLEMDFMAVSSYGH   96 (204)
T ss_dssp             --CCCCCCCGGGGEEEEEECHHHHHHHHHHHHHHHHHHTSSSCCEEEEETTTTHHHHHHHHHTCCSCCEEEEEEEEECSG
T ss_pred             CCCCCCchhhhhcCCcEeCCHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCcchHHHHHHHHHHhCCCcceEEEEEEEecC
Confidence            37899999998899999999999999999999888642   578999999999999999999999985  3444432111


Q ss_pred             CcccchheeeeccceeEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChhhhhccCCCCeEE
Q 029741           99 GEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQRRLDGKPLYI  178 (188)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~~~~~l~~~~~~~  178 (188)
                      +. .      ..+...+........+||+||||||+++||+|+.++++.|+++|++++.++++++++.++ .+.-.+=+.
T Consensus        97 ~~-~------~~~~v~i~~~l~~~~~gk~VliVDDii~TG~Tl~~~~~~l~~~g~~~v~~~~l~~k~~~~-~~~~~~Dy~  168 (204)
T 3hvu_A           97 ST-V------STGEVKILKDLDTSVEGRDILIVEDIIDSGLTLSYLVDLFKYRKAKSVKIVTLLDKPTGR-KVDLKADYV  168 (204)
T ss_dssp             GG-T------TSCCEEEEECCSSCCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCSEEEEEEEEECGGGC-SSCCCCSEE
T ss_pred             CC-c------cCCcEEEEcCCCccCCCCEEEEEeceeCchHHHHHHHHHHHHcCCCEEEEEEEEECCCCC-cCCCCCCEE
Confidence            00 0      001112221112235899999999999999999999999999999999999999998654 233223344


Q ss_pred             EEeccc
Q 029741          179 LVEPRL  184 (188)
Q Consensus       179 l~~~~~  184 (188)
                      -+++++
T Consensus       169 g~~ipd  174 (204)
T 3hvu_A          169 GFTVPH  174 (204)
T ss_dssp             EEECCS
T ss_pred             EEEcCC
Confidence            555554

>1vdm_A Purine phosphoribosyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Pyrococcus horikoshii} SCOP: c.61.1.1

Probab=99.83  E-value=6.2e-20  Score=137.40  Aligned_cols=138  Identities=14%  Similarity=0.239  Sum_probs=100.9

Q ss_pred             hhcCHHHHHHHHHHHHHHHhcCCCcEEEEeCCCChhhHHHHHHHhCCCeE-EEeecCCCCCcccchheeeeccceeEEEe
Q 029741           40 LLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFV-PLRKPNKLPGEVISEAYVLEYGTDRLEMH  118 (188)
Q Consensus        40 ll~~~~~~~~l~~~la~~~~~~~~d~Iv~v~~gG~~~a~~lA~~l~~p~~-~~~k~~~~~~~~~~~~~~~~~~~~~~~l~  118 (188)
                      ++.+++.+..+++.|++++.+.++|+|++++.||+++|..+|..+++|+. .+++.......      . ......+...
T Consensus         4 ~~~s~~~~~~~~~~la~~i~~~~~d~iv~v~~gg~~~a~~la~~l~~~~~~~~~~~~~~~~~------~-~~~~~~~~~~   76 (153)
T 1vdm_A            4 VYLTWWQVDRAIFALAEKLREYKPDVIIGVARGGLIPAVRLSHILGDIPLKVIDVKFYKGID------E-RGEKPVITIP   76 (153)
T ss_dssp             EECCHHHHHHHHHHHHHHHHHHCCSEEEEETTTTHHHHHHHHHHTTSCCEEEEEEECCCC--------C-CCSSCEEEEC
T ss_pred             eECCHHHHHHHHHHHHHHHHccCCCEEEEECCcCHHHHHHHHHHhCCCceEEEEEEEecCCc------c-cccceeEecc
Confidence            45677888888999998886557899999999999999999999999965 34332211100      0 0011123332


Q ss_pred             cCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChhhhhccCCCCeEEEEeccccccC
Q 029741          119 VGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQRRLDGKPLYILVEPRLSVNY  188 (188)
Q Consensus       119 ~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~~~~~l~~~~~~~l~~~~~~~~~  188 (188)
                      .....+|++||||||++|||+|+.++++.|+++|++++.+++++.++.....    |=+.-.++++|+-|
T Consensus        77 ~~~~~~gk~VllVDDvitTG~Tl~~a~~~L~~~ga~~v~~~~l~~~~~~~~~----~dy~g~~~~~~~vf  142 (153)
T 1vdm_A           77 IHGDLKDKRVVIVDDVSDTGKTLEVVIEEVKKLGAKEIKIACLAMKPWTSVV----PDYYVFRTEKWIVF  142 (153)
T ss_dssp             CCSCCBTCEEEEEEEEESSCHHHHHHHHHHHTTTBSEEEEEEEEECTTCSSC----CSBBCEECSSEEEC
T ss_pred             CCcCCCCCEEEEEecccCChHHHHHHHHHHHHcCCCEEEEEEEEeCCCCCCC----ceEEEEecCCeEEe
Confidence            2334689999999999999999999999999999999999999999864322    33444556666544

>1hgx_A HGXPRTASE, hypoxanthine-guanine-xanthine phosphoribosyltransferase; glycosyltransferase, purine salvage, transferase (glycosyltransferase); HET: 5GP; 1.90A {Tritrichomonas foetus} SCOP: c.61.1.1

Probab=99.82  E-value=1.3e-19  Score=139.83  Aligned_cols=146  Identities=13%  Similarity=0.180  Sum_probs=104.3

Q ss_pred             CceEEechhhhcCHHHHHHHHHHHHHHHhcC---CCcEEEEeCCCChhhHHHHHHHhCCCeEE--EeecCCCCCcccchh
Q 029741           31 GIMFQDITTLLLDHKAFKDTVDIFVDRYRDM---GISVVAGIEARGFVFGPSIALAIGAKFVP--LRKPNKLPGEVISEA  105 (188)
Q Consensus        31 g~~~~d~~~ll~~~~~~~~l~~~la~~~~~~---~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~--~~k~~~~~~~~~~~~  105 (188)
                      ..++.|+..++.+++.+...+..|++++.+.   ++++|++++.||+++|..+|..|++|+..  ++.... ...     
T Consensus         4 ~~~~~di~~~l~~~~~i~~~~~~la~~i~~~~~~~~~vvv~i~~gg~~~a~~la~~l~~p~~~~~~~~~~y-~~~-----   77 (183)
T 1hgx_A            4 TPMMDDLERVLYNQDDIQKRIRELAAELTEFYEDKNPVMICVLTGAVFFYTDLLKHLDFQLEPDYIICSSY-SGT-----   77 (183)
T ss_dssp             ---CTTEEEEEECHHHHHHHHHHHHHHHHHHHTTTCCEEEEETTTTHHHHHHHHTTCCSCCEEEEEEEEC----------
T ss_pred             CCcCcCcceEEcCHHHHHHHHHHHHHHHHHHcCCCCcEEEEeCcChHHHHHHHHHHcCCCcceeEEEEEec-CCc-----
Confidence            3456788889999999999999999888642   68899999999999999999999999653  221111 110     


Q ss_pred             eeeeccceeEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChhhhhccCCCCeEEEEeccc
Q 029741          106 YVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQRRLDGKPLYILVEPRL  184 (188)
Q Consensus       106 ~~~~~~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~~~~~l~~~~~~~l~~~~~  184 (188)
                      .  ..+...+........+||+||||||+++||+|+.++++.|+++|++++.+++++.++.+...+.-.+=+.-+++++
T Consensus        78 ~--~~~~~~~~~~~~~~~~gk~VllVDDvi~TG~Tl~~a~~~L~~~ga~~v~~~~l~~~~~g~~~~~~~~d~~g~~~p~  154 (183)
T 1hgx_A           78 K--STGNLTISKDLKTNIEGRHVLVVEDIIDTGLTMYQLLNNLQMRKPASLKVCTLCDKDIGKKAYDVPIDYCGFVVEN  154 (183)
T ss_dssp             -------CEEEECCSSCCTTSEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEEEECCSSCSSCCCCSEEEEEECS
T ss_pred             c--cccceEEeecCCCCCCCCEEEEECCccCCHHHHHHHHHHHHhcCCCEEEEEEEEecCcccccCCCCCCEEEEEeCC
Confidence            0  0111122221122368999999999999999999999999999999999999999876444554223344445554

>1fsg_A HGPRTASE, hypoxanthine-guanine phosphoribosyltransferase; glycosyltransferase, purine salvage; HET: PRP 9DG; 1.05A {Toxoplasma gondii} SCOP: c.61.1.1 PDB: 1qk3_A* 1qk4_A* 1qk5_A* 1dbr_A

Probab=99.81  E-value=7.6e-20  Score=146.34  Aligned_cols=137  Identities=20%  Similarity=0.182  Sum_probs=106.8

Q ss_pred             cccCCCCCCCceEEechhhhcCHHHHHHHHHHHHHHHhc---CCCcEEEEeCCCChhhHHHHHHHhCC------------
Q 029741           22 RVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRD---MGISVVAGIEARGFVFGPSIALAIGA------------   86 (188)
Q Consensus        22 r~~~~~~~~g~~~~d~~~ll~~~~~~~~l~~~la~~~~~---~~~d~Iv~v~~gG~~~a~~lA~~l~~------------   86 (188)
                      .....||.+++++.|+..++.+++.+...++.|++++.+   .++++|+|++.||+++|..+|+.|+.            
T Consensus        30 ~~~~~F~~~~~~~~di~~~l~~~~~i~~~~~~La~~i~~~~~~~~~vVvgi~~gG~~~a~~la~~L~~~~~~~~~k~~~~  109 (233)
T 1fsg_A           30 YNADDFLVPPHCKPYIDKILLPGGLVKDRVEKLAYDIHRTYFGEELHIICILKGSRGFFNLLIDYLATIQKYSGRESSVP  109 (233)
T ss_dssp             EEGGGSCCCTTTTTTCCEEEECHHHHHHHHHHHHHHHHHHHTTSCEEEEEEETTTHHHHHHHHHHHHHHHHHCSSCCSSC
T ss_pred             CccccCccCCcchhhCcEEeeCHHHHHHHHHHHHHHHHHHcCCCCCEEEEEccCCHHHHHHHHHHhCCcccccccccCCC
Confidence            455788989988889999999999999999999988864   36889999999999999999999987            


Q ss_pred             Ce--EEEeecCCCCCcccchheeeeccceeEEEecC--CCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEe
Q 029741           87 KF--VPLRKPNKLPGEVISEAYVLEYGTDRLEMHVG--AIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVV  162 (188)
Q Consensus        87 p~--~~~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~  162 (188)
                      |+  .+++...          |..+.++..+.+...  ...+||+||||||+++||+|+.++++.|+++|++++.+++++
T Consensus       110 P~~~~~i~~~~----------y~~~~~~~~~~~~~~~~~~~~Gk~VLIVDDii~TG~Tl~~a~~~L~~~ga~~V~vavl~  179 (233)
T 1fsg_A          110 PFFEHYVRLKS----------YQNDNSTGQLTVLSDDLSIFRDKHVLIVEDIVDTGFTLTEFGERLKAVGPKSMRIATLV  179 (233)
T ss_dssp             SCEEEEEEEEE----------EETTEEEEEEEEECSCGGGGTTCEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEE
T ss_pred             CcEEEEEEEEe----------ccCccccccEEEecCCccccCCCEEEEEccccCcHHHHHHHHHHHHhcCCCEEEEEEEE
Confidence            52  2222211          110111122232211  235899999999999999999999999999999999999999


Q ss_pred             eChhhh
Q 029741          163 GLPEGQ  168 (188)
Q Consensus       163 ~~~~~~  168 (188)
                      +++..+
T Consensus       180 ~k~~~~  185 (233)
T 1fsg_A          180 EKRTDR  185 (233)
T ss_dssp             EECCTT
T ss_pred             ECCccc
Confidence            987643

>2geb_A Hypoxanthine-guanine phosphoribosyltransferase; HGPRT, mutant, inhibitor design, selectivity; 1.70A {Thermoanaerobacter tengcongensis}

Probab=99.79  E-value=2.5e-18  Score=132.87  Aligned_cols=140  Identities=16%  Similarity=0.154  Sum_probs=100.0

Q ss_pred             chhhhcCHHHHHHHHHHHHHHHhcC---CCcEEEEeCCCChhhHHHHHHHhCCCe--EEEeecCCCCCcccchheeeecc
Q 029741           37 ITTLLLDHKAFKDTVDIFVDRYRDM---GISVVAGIEARGFVFGPSIALAIGAKF--VPLRKPNKLPGEVISEAYVLEYG  111 (188)
Q Consensus        37 ~~~ll~~~~~~~~l~~~la~~~~~~---~~d~Iv~v~~gG~~~a~~lA~~l~~p~--~~~~k~~~~~~~~~~~~~~~~~~  111 (188)
                      +..++.+++.+...+..|++++.+.   ++++|++++.||+++|..+|..|++|+  .++++.......   .    ..+
T Consensus        12 ~~~~l~~~~~i~~~~~~La~~i~~~~~~~~~vvv~i~~gG~~~a~~la~~l~~p~~~~~i~~~~y~~~~---~----~~~   84 (185)
T 2geb_A           12 IEEILITEEQLKAKVKELGEMITRDYEGKDLVLIGVLKGAIMFMSGLSRAIDLPLSIDFLAVSSYGSST---K----SSG   84 (185)
T ss_dssp             EEEEEECHHHHHHHHHHHHHHHHHHTTTSCEEEEEETTTTHHHHHHHHHTCCSCCEEEEEEEEECSTTH---H----HHC
T ss_pred             cceEEeCHHHHHHHHHHHHHHHHHHcCCCCCEEEEECcCcHHHHHHHHHHcCCCceeEEEEEEecCCCC---c----cCc
Confidence            4456788888888888888888642   578999999999999999999999986  334322211110   0    001


Q ss_pred             ceeEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChhhhhccCCCCeEEEEeccc
Q 029741          112 TDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQRRLDGKPLYILVEPRL  184 (188)
Q Consensus       112 ~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~~~~~l~~~~~~~l~~~~~  184 (188)
                      ...+........+|++||||||+++||+|+.++++.|+++|++++.+++++++++++ .+.-.+=+.-+++++
T Consensus        85 ~~~~~~~~~~~~~gk~VllVDDvi~TG~Tl~~a~~~L~~~Ga~~V~~~~l~~~~~~~-~~~~~~d~~g~~~p~  156 (185)
T 2geb_A           85 IVKIIKDHDIDIEGKDVLIVEDIIDSGLTLAYLRETLLGRKPRSLKICTILDKPERR-EADVKVDYCGFKIPD  156 (185)
T ss_dssp             CEEEEECCCSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGGGC-CSCCCCSEEEEECCS
T ss_pred             cEEEeccCCCCCCCCEEEEECCccCCHHHHHHHHHHHHhcCCCEEEEEEEEECCCcc-cCCCCCCEEEEEcCC
Confidence            111211112236899999999999999999999999999999999999999998754 243223344445554

>1z7g_A HGPRT, HGPRTASE, hypoxanthine-guanine phosphoribosyltransferase; flexibility, trans CIS peptide bond isomerization, nucleotide binding; 1.90A {Homo sapiens} SCOP: c.61.1.1 PDB: 1hmp_A* 1bzy_A 3gep_A* 3ggc_A* 3ggj_A* 1d6n_A* 2vfa_A*

Probab=99.78  E-value=8.1e-19  Score=138.95  Aligned_cols=136  Identities=15%  Similarity=0.197  Sum_probs=103.9

Q ss_pred             cccCCCCCCCceEEechhhhcCHHHHHHHHHHHHHHHhc---CCCcEEEEeCCCChhhHHHHHHHhC---------CCe-
Q 029741           22 RVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRD---MGISVVAGIEARGFVFGPSIALAIG---------AKF-   88 (188)
Q Consensus        22 r~~~~~~~~g~~~~d~~~ll~~~~~~~~l~~~la~~~~~---~~~d~Iv~v~~gG~~~a~~lA~~l~---------~p~-   88 (188)
                      ...++||.+|+++.|+..++.+++.++...+.|++++..   .+.++|+|++.||+++|..+|+.|+         +|+ 
T Consensus        16 ~~~~~f~~~~~~~~di~~il~~~~~~~~~~~~La~~i~~~~~~~~~vVvgi~~GG~~~a~~la~~L~~~~~i~~g~~~~~   95 (217)
T 1z7g_A           16 YDLDLFCIPNHYAEDLERVFIPHGLIMDRTERLARDVMKEMGGHHIVALCVLKGGYKFFADLLDYIKALNRNSDRSIPMT   95 (217)
T ss_dssp             BCGGGSCCCGGGTTTEEEEEECHHHHHHHHHHHHHHHHHHHTTSCEEEEEECSSCCHHHHHHHHHHHHHHTTCSSCCCEE
T ss_pred             CcccccccCcccccccceEEECHHHHHHHHHHHHHHHHHHcCCCCCEEEEECCCCHHHHHHHHHHhCCccccCCCceEee
Confidence            345689999998999999999999999999999988863   3678999999999999999999998         564 


Q ss_pred             -EEEeecCCCCCcccchheeeeccceeEEEec---CCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeC
Q 029741           89 -VPLRKPNKLPGEVISEAYVLEYGTDRLEMHV---GAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGL  164 (188)
Q Consensus        89 -~~~~k~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~  164 (188)
                       .+++..... .         +.....+.+..   ....+||+||||||+++||+|+.++++.|+++|++++.+++++.+
T Consensus        96 ~~~i~~~~y~-~---------~~~~~~~~~~~~~~~~~~~gk~VliVDDii~TG~Tl~~~~~~L~~~g~~~v~~~~l~~k  165 (217)
T 1z7g_A           96 VDFIRLKSYC-N---------DQSTGDIKVIGGDDLSTLTGKNVLIVEDIIDTGKTMQTLLSLVRQYNPKMVKVASLLVK  165 (217)
T ss_dssp             EEEECBC--------------------CCBCCSSCGGGGTTSEEEEEEEECCCHHHHHHHHHHHHTTCCSEEEEEEEEEE
T ss_pred             eeeEEEEEec-c---------cccccceEEecCCCccccCCCEEEEEeceeCcHHHHHHHHHHHHhcCCCEEEEEEEEEC
Confidence             333321110 0         00111111111   123589999999999999999999999999999999999999997


Q ss_pred             hhh
Q 029741          165 PEG  167 (188)
Q Consensus       165 ~~~  167 (188)
                      ++.
T Consensus       166 ~~~  168 (217)
T 1z7g_A          166 RTP  168 (217)
T ss_dssp             CC-
T ss_pred             ccc
Confidence            754

>2jbh_A Phosphoribosyltransferase domain-containing prote; glycosyltransferase, purine salvage; HET: 5GP; 1.7A {Homo sapiens}

Probab=99.78  E-value=1.7e-18  Score=137.83  Aligned_cols=151  Identities=16%  Similarity=0.225  Sum_probs=108.0

Q ss_pred             CCCCCCCceEEechhhhcCHHHHHHHHHHHHHHHhc---CCCcEEEEeCCCChhhHHHHHHHhC---------CCe--EE
Q 029741           25 PDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRD---MGISVVAGIEARGFVFGPSIALAIG---------AKF--VP   90 (188)
Q Consensus        25 ~~~~~~g~~~~d~~~ll~~~~~~~~l~~~la~~~~~---~~~d~Iv~v~~gG~~~a~~lA~~l~---------~p~--~~   90 (188)
                      ..||.+++++.|+..++.+++.+...+..|++++.+   .++++|+|++.||+++|..+|..|+         +|+  .+
T Consensus        27 ~~F~~~~~~~~di~~~l~~~~~i~~~~~~La~~i~~~~~~~~~vvv~i~~gG~~~a~~la~~L~~~~~~~~~~~p~~~~~  106 (225)
T 2jbh_A           27 NLFTYPQHYYGDLEYVLIPHGIIVDRIERLAKDIMKDIGYSDIMVLCVLKGGYKFXADLVEHLKNISRNSDRFVSMKVDF  106 (225)
T ss_dssp             GGSCCCGGGTTSEEEEEECHHHHHHHHHHHHHHHHHHHTTSCEEEEEEETTTHHHHHHHHHHHHHHHHHSSCCCCEEEEE
T ss_pred             HHCccCccccccCceEEECHHHHHHHHHHHHHHHHHHcCCCCCEEEEEcCCCEehhHHHHHHhhhhccccccCCCceEEE
Confidence            467788887778899999999999999999988864   3678999999999999999999998         674  33


Q ss_pred             EeecCCCCCcccchheeeeccceeEEEecC-CCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChhhhh
Q 029741           91 LRKPNKLPGEVISEAYVLEYGTDRLEMHVG-AIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQR  169 (188)
Q Consensus        91 ~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~~~~  169 (188)
                      ++.... ...     +  ..+...+..... ...+||+||||||+++||+|+.++++.|+++|++++.+++++.++..+ 
T Consensus       107 i~~~~y-~~~-----~--~~~~~~~~~~~~~~~v~Gk~VllVDDii~TG~Tl~~a~~~L~~~ga~~V~va~l~~k~~~~-  177 (225)
T 2jbh_A          107 IRLKSY-RND-----Q--SMGEMQIIGGDDLSTLAGKNVLIVEDVVGTGRTMKALLSNIEKYKPNMIKVASLLVKRTSR-  177 (225)
T ss_dssp             EEEC------------------CCEESSSCGGGGTTSEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEEEECC-C-
T ss_pred             EEEEec-cCc-----c--ccccEEEecCCCccccCCCEEEEEccccCcHHHHHHHHHHHHhcCCCEEEEEEEEECCccc-
Confidence            443221 110     0  001111211001 235899999999999999999999999999999999999999977643 


Q ss_pred             ccCCCCeEEEEeccc
Q 029741          170 RLDGKPLYILVEPRL  184 (188)
Q Consensus       170 ~l~~~~~~~l~~~~~  184 (188)
                      .+.-.+-+.-+++++
T Consensus       178 ~~~~~~dy~g~~ip~  192 (225)
T 2jbh_A          178 SDGFRPDYAGFEIPN  192 (225)
T ss_dssp             CSCCCCSEEEEEECS
T ss_pred             cCCCCccEEEEECCC
Confidence            333223344455544

>3o7m_A Hypoxanthine phosphoribosyltransferase; hypoxanthine-guanine phosphoribosyltransferase, salvage of nucleosides and nucleotides; HET: GOL; 1.98A {Bacillus anthracis} SCOP: c.61.1.0

Probab=99.78  E-value=5.6e-18  Score=131.13  Aligned_cols=144  Identities=15%  Similarity=0.182  Sum_probs=103.3

Q ss_pred             eEEechhhhcCHHHHHHHHHHHHHHHhcC---CCcEEEEeCCCChhhHHHHHHHhCCCeE--EEeecCCCCCcccchhee
Q 029741           33 MFQDITTLLLDHKAFKDTVDIFVDRYRDM---GISVVAGIEARGFVFGPSIALAIGAKFV--PLRKPNKLPGEVISEAYV  107 (188)
Q Consensus        33 ~~~d~~~ll~~~~~~~~l~~~la~~~~~~---~~d~Iv~v~~gG~~~a~~lA~~l~~p~~--~~~k~~~~~~~~~~~~~~  107 (188)
                      +..|+..++.+++.++..++.|++++.+.   ++++|+|++.||+.+|..+|..|++|+.  +++..+...+..      
T Consensus         4 ~~~di~~~l~~~~~i~~~i~~La~~I~~~~~~~~~vvVgi~~gG~~~a~~la~~L~~p~~i~~i~~~~Y~~~~~------   77 (186)
T 3o7m_A            4 MNIEIKDTLISEEQLQEKVKELALQIERDFEGEEIVVIAVLKGSFVFAADLIRHIKNDVTIDFISASSYGNQTE------   77 (186)
T ss_dssp             -CCEEEEEEECHHHHHHHHHHHHHHHHHHTTTSCEEEEEETTTTHHHHHHHHTTCCSCEEEEEEEEEECC----------
T ss_pred             ccccccEEecCHHHHHHHHHHHHHHHHHHcCCCCCEEEEECcchHHHHHHHHHHhCCCCceEEEEEEEecCCCc------
Confidence            34467788999999999999998887642   5789999999999999999999999863  344322111100      


Q ss_pred             eeccceeEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChhhhhccCCCCeEEEEeccc
Q 029741          108 LEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQRRLDGKPLYILVEPRL  184 (188)
Q Consensus       108 ~~~~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~~~~~l~~~~~~~l~~~~~  184 (188)
                       ..+.-.+........+|++||||||+++||+|+.++++.|+++|++++.++++++++.+++ +.-.+-+.-+++++
T Consensus        78 -~~~~v~i~~~~~~~~~gk~VliVDDii~TG~Tl~~~~~~l~~~g~~~v~~~~l~~k~~~~~-~~i~~dy~G~~ip~  152 (186)
T 3o7m_A           78 -TTGKVKLLKDIDVNITGKNVIVVEDIIDSGLTLHFLKDHFFMHKPKALKFCTLLDKPERRK-VDLTAEYVGFQIPD  152 (186)
T ss_dssp             ----CEEEEECCCSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGGGCS-SCCCCSEEEEECCC
T ss_pred             -ccCcEEEEecCCCCCCcCEEEEEcCeeCCcHHHHHHHHHHHhcCCcEEEEEEEEECCCCCc-CCCCCCEEEEEcCC
Confidence             0111122211123358999999999999999999999999999999999999999986542 33223444555554

>1pzm_A HGPRT, hypoxanthine-guanine phosphoribosyltransferase; HET: 5GP; 2.10A {Leishmania tarentolae} SCOP: c.61.1.1

Probab=99.77  E-value=3.7e-18  Score=134.62  Aligned_cols=144  Identities=13%  Similarity=0.150  Sum_probs=99.5

Q ss_pred             CceEEechhhhcCHHHHHHHHHHHHHHHhc---------CCCcEEEEeCCCChhhHHHHHHHh---CCCe--EEEeecCC
Q 029741           31 GIMFQDITTLLLDHKAFKDTVDIFVDRYRD---------MGISVVAGIEARGFVFGPSIALAI---GAKF--VPLRKPNK   96 (188)
Q Consensus        31 g~~~~d~~~ll~~~~~~~~l~~~la~~~~~---------~~~d~Iv~v~~gG~~~a~~lA~~l---~~p~--~~~~k~~~   96 (188)
                      .+.+.|+..++.+++.+...+..|++++.+         .++++|+|++.||+++|..+|..|   ++|+  .++++.+.
T Consensus        17 ~~~~~di~~~l~~~~~i~~~~~~La~~i~~~~~~~~~~~~~~~vvvgi~~gG~~~a~~la~~L~~~~~p~~~~~i~~~~y   96 (211)
T 1pzm_A           17 RRNYPMSARTLVTQEQVWAATAKCAKKIAADYKDFHLTADNPLYLLCVLKGSFIFTADLARFLADEGVPVKVEFICASSY   96 (211)
T ss_dssp             ---CTTEEEEEECHHHHHHHHHHHHHHHHHHHGGGTCBTTBCEEEEEETTTTHHHHHHHHHHHHHTTCCEEEEEEBCC--
T ss_pred             cccccccceEEeCHHHHHHHHHHHHHHHHHhcccccccCCCCCEEEEEccchHHHHHHHHHHHhhcCCCceeeeEEeeec
Confidence            344567888889999988888888877653         357899999999999999999999   9994  34443221


Q ss_pred             CCCcccchheeeeccceeEEEe--cCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChhhhhccCCC
Q 029741           97 LPGEVISEAYVLEYGTDRLEMH--VGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQRRLDGK  174 (188)
Q Consensus        97 ~~~~~~~~~~~~~~~~~~~~l~--~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~~~~~l~~~  174 (188)
                      ....        +. ...+.+.  .....+||+||||||+++||+|+.++++.|+++|++++.+++++++++++ .+.-.
T Consensus        97 ~~~~--------~~-~~~~~~~~~~~~~v~gk~VllVDDvi~TG~Tl~aa~~~L~~~Ga~~V~v~~l~~k~~~~-~~~~~  166 (211)
T 1pzm_A           97 GSGV--------ET-SGQVRMLLDVRDSVENRHIMLVEDIVDSAITLQYLMRFMLAKKPASLKTVVLLDKPSGR-KVDVL  166 (211)
T ss_dssp             --------------------CCBCCSSCCTTCEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGGGC-SSCCC
T ss_pred             cCcc--------cc-CCceEEeccCCCCCCCCEEEEECCccccHHHHHHHHHHHHhcCCCEEEEEEEEecCccC-cCCCC
Confidence            1000        00 0011111  12235899999999999999999999999999999999999999998753 33322


Q ss_pred             CeEEEEeccc
Q 029741          175 PLYILVEPRL  184 (188)
Q Consensus       175 ~~~~l~~~~~  184 (188)
                      +-+.-+++++
T Consensus       167 ~d~~g~~ip~  176 (211)
T 1pzm_A          167 VDYPVITIPR  176 (211)
T ss_dssp             CSEEEEECCS
T ss_pred             CCEEEEECCC
Confidence            3344444443

>1tc1_A Protein (hypoxanthine phosphoribosyltransferase); transferase,phosphoribosyltransferase, purine salvage, nucleotide metabolism; HET: FMB MES; 1.41A {Trypanosoma cruzi} SCOP: c.61.1.1 PDB: 1tc2_A* 1p19_A* 1p18_A* 1p17_A* 1i0l_A* 1i14_A* 1i0i_A* 1i13_A*

Probab=99.76  E-value=1.6e-17  Score=131.73  Aligned_cols=141  Identities=15%  Similarity=0.176  Sum_probs=97.9

Q ss_pred             echhhhcCHHHHHHHHHHHHHHHhcC---CC-------cEEEEeCCCChhhHHHHHHHh---CCCe--EEEeecCCCCCc
Q 029741           36 DITTLLLDHKAFKDTVDIFVDRYRDM---GI-------SVVAGIEARGFVFGPSIALAI---GAKF--VPLRKPNKLPGE  100 (188)
Q Consensus        36 d~~~ll~~~~~~~~l~~~la~~~~~~---~~-------d~Iv~v~~gG~~~a~~lA~~l---~~p~--~~~~k~~~~~~~  100 (188)
                      |+..++.+++.+...++.|++++...   +.       ++|+|++.||+++|..+|..|   ++|+  .+++..+.....
T Consensus         6 di~~~li~~~~i~~~~~~La~~I~~~~~~~~~~~~~p~~vVv~v~~gG~~~a~~La~~L~~~~~p~~~~~l~~~~y~~~~   85 (220)
T 1tc1_A            6 FAEKILFTEEEIRTRIKEVAKRIADDYKGKGLRPYVNPLVLISVLKGSFMFTADLCRALCDFNVPVRMEFICVSSYGEGL   85 (220)
T ss_dssp             TSCCEEECHHHHHHHHHHHHHHHHHHHTTSCCBTTTBCEEEEEETTTTHHHHHHHHHHHHHTTCCEEEEEEEEECC----
T ss_pred             ccccEeeCHHHHHHHHHHHHHHHHHHccCcccccCCCCeEEEEeccCCHHHHHHHHHHHHhcCCCccccEEEEeecCCCc
Confidence            46667788888888888888777532   23       899999999999999999999   9995  344432211110


Q ss_pred             ccchheeeeccceeEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChhhhhccCCCCeEEEE
Q 029741          101 VISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQRRLDGKPLYILV  180 (188)
Q Consensus       101 ~~~~~~~~~~~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~~~~~l~~~~~~~l~  180 (188)
                           .  ..+.-.+........+||+||||||+++||+|+.++++.|+++|+++|.+++++.++.++ .+.-.+-+.-+
T Consensus        86 -----~--~~~~v~~~~~~~~~v~Gk~VLLVDDii~TG~Tl~~a~~~L~~~Ga~~V~v~~l~~k~~~~-~~~~~~dy~g~  157 (220)
T 1tc1_A           86 -----T--SSGQVRMLLDTRHSIEGHHVLIVEDIVDTALTLNYLYHMYFTRRPASLKTVVLLDKREGR-RVPFSADYVVA  157 (220)
T ss_dssp             ------------CEEEECCSSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECTTCC-SSCCCCSEEEE
T ss_pred             -----c--cCCcEEEecCCCccCCCCEEEEEeCccCcHHHHHHHHHHHHhcCCCEEEEEEEEECCccC-cCCCCCCEEEE
Confidence                 0  001111211112235899999999999999999999999999999999999999998653 33322333344


Q ss_pred             eccc
Q 029741          181 EPRL  184 (188)
Q Consensus       181 ~~~~  184 (188)
                      ++++
T Consensus       158 ~ip~  161 (220)
T 1tc1_A          158 NIPN  161 (220)
T ss_dssp             ECCS
T ss_pred             ECCc
Confidence            4444

>1yfz_A Hypoxanthine-guanine phosphoribosyltransferase; protein-nucleotide complex; HET: IMP; 2.20A {Thermoanaerobacter tengcongensis} SCOP: c.61.1.1 PDB: 1r3u_A*

Probab=99.76  E-value=6.2e-18  Score=132.62  Aligned_cols=140  Identities=16%  Similarity=0.154  Sum_probs=99.3

Q ss_pred             chhhhcCHHHHHHHHHHHHHHHhcC---CCcEEEEeCCCChhhHHHHHHHhCCCe--EEEeecCCCCCcccchheeeecc
Q 029741           37 ITTLLLDHKAFKDTVDIFVDRYRDM---GISVVAGIEARGFVFGPSIALAIGAKF--VPLRKPNKLPGEVISEAYVLEYG  111 (188)
Q Consensus        37 ~~~ll~~~~~~~~l~~~la~~~~~~---~~d~Iv~v~~gG~~~a~~lA~~l~~p~--~~~~k~~~~~~~~~~~~~~~~~~  111 (188)
                      +..++.+++.+...+..|++++.+.   ++++|+|++.||+++|..+|..|++|+  .++++.+.. ...  .    ..+
T Consensus        32 ~~~~l~~~~~i~~~~~~La~~i~~~~~~~~~viv~v~~gG~~~a~~la~~l~~p~~~~~~~~~~y~-~~~--~----~~~  104 (205)
T 1yfz_A           32 IEEILITEEQLKAKVKELGEMITRDYEGKDLVLIGVLKGAIMFMSGLSRAIDLPLSIDFLAVSSYG-SST--K----SSG  104 (205)
T ss_dssp             EEEEEECHHHHHHHHHHHHHHHHHHTTTSCEEEEEETTTHHHHHHHHHHTCCSCCEEEEEEEEECS-HHH--H----HHC
T ss_pred             cceEEcCHHHHHHHHHHHHHHHHHHcCCCCCEEEEECcCCHHHHHHHHHHhCCCceeEEEEEEecc-CCc--c----ccc
Confidence            4446788888888888888887642   588999999999999999999999996  334322211 000  0    001


Q ss_pred             ceeEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChhhhhccCCCCeEEEEeccc
Q 029741          112 TDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQRRLDGKPLYILVEPRL  184 (188)
Q Consensus       112 ~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~~~~~l~~~~~~~l~~~~~  184 (188)
                      ...+........+|++||||||+++||+|+.++++.|+++|++++.+++++++++++ .+.-.+=+.-+++++
T Consensus       105 ~~~~~~~~~~~~~gk~VllVDDvi~TG~Tl~~a~~~L~~~Ga~~V~~~~l~~~~~~~-~~~~~~d~~g~~~p~  176 (205)
T 1yfz_A          105 IVKIIKDHDIDIEGKDVLIVEDIIDSGLTLAYLRETLLGRKPRSLKICTILDKPERR-EADVKVDYCGFKIPD  176 (205)
T ss_dssp             CEEEEECCCSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGGGC-CSCCCCSEEEEECCS
T ss_pred             eEEEeccCCCCCCcCEEEEECCccCcHHHHHHHHHHHHhcCCCEEEEEEEEecCccc-cCCCCCCEEEEEcCC
Confidence            111211112236899999999999999999999999999999999999999998754 243223344445554

>3ozf_A Hypoxanthine-guanine-xanthine phosphoribosyltrans; transferase-transferase inhibitor complex; HET: HPA; 1.94A {Plasmodium falciparum fcr-3} PDB: 3ozg_A* 1cjb_A*

Probab=99.74  E-value=1.9e-17  Score=133.33  Aligned_cols=142  Identities=16%  Similarity=0.189  Sum_probs=101.8

Q ss_pred             CCCCCceEEechhhhcCHHHHHHHHHHHHHHHhcC---CCcEEEEeCCCChhhHHHHHHHhCCCeEE-EeecCCCCCcc-
Q 029741           27 FPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRDM---GISVVAGIEARGFVFGPSIALAIGAKFVP-LRKPNKLPGEV-  101 (188)
Q Consensus        27 ~~~~g~~~~d~~~ll~~~~~~~~l~~~la~~~~~~---~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~-~~k~~~~~~~~-  101 (188)
                      |..+..++.|+..++.+++.++...+.|++++.+.   +.++|+|++.||+.+|..+|..|+.+++. +||..+.+.++ 
T Consensus        49 f~~p~~~~~di~~vli~~~~I~~~i~~LA~~I~~~~~~~~~vVVgIl~gG~~fa~~La~~L~~~~v~~~rk~gklP~~v~  128 (250)
T 3ozf_A           49 FMIPAHYKKYLTKVLVPNGVIKNRIEKLAYDIKKVYNNEEFHILCLLKGSRGFFTALLKHLSRIHNYSAVETSKPLFGEH  128 (250)
T ss_dssp             SCCCGGGGGGEEEEEECHHHHHHHHHHHHHHHHHHHTTCCEEEEEEETTTHHHHHHHHHHHHHHHHHHCCTTCCCCEEEE
T ss_pred             ccCchhhhccCeEEEECHHHHHHHHHHHHHHHHHHcCCCCCEEEEECcchHHHHHHHHHHhccccccccccccCCCceEE
Confidence            34445677788999999999999999998877532   57899999999999999999999832211 11111111110 


Q ss_pred             -c-chheeeeccceeEEEecCC--CCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChhhh
Q 029741          102 -I-SEAYVLEYGTDRLEMHVGA--IEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQ  168 (188)
Q Consensus       102 -~-~~~~~~~~~~~~~~l~~~~--~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~~~  168 (188)
                       + ..+|..+++...+.+..+.  ..+|++||||||+++||+|+.++++.|+++|++++.++++++++.++
T Consensus       129 fI~~ssY~~~~s~g~v~i~~~~~~~~~gk~VlIVDDii~TG~Tl~~~~~~L~~~g~~~v~va~l~~k~~~r  199 (250)
T 3ozf_A          129 YVRVKSYCNDQSTGTLEIVSEDLSCLKGKHVLIVEDIIDTGKTLVKFCEYLKKFEIKTVAIACLFIKRTPL  199 (250)
T ss_dssp             EEEEEEEETTEEEEEEEEECCCGGGGTTCEEEEEEEEESSSHHHHHHHHHHGGGCCSEEEEEEEEEECCTT
T ss_pred             EEEEEEecCCcccCcEEEEcCCccccCCCEEEEEeceeCchHHHHHHHHHHHhcCCCEEEEEEEEECCccc
Confidence             0 0112222223334443222  24899999999999999999999999999999999999999998643

>1a3c_A PYRR, pyrimidine operon regulatory protein PYRR; transcription regulation, attenuation protein, RNA-binding P pyrimidine biosynthesis; 1.60A {Bacillus subtilis} SCOP: c.61.1.1 PDB: 1a4x_A 2igb_A* 1xz8_A* 1non_A 1xzn_A*

Probab=99.73  E-value=4.5e-17  Score=125.09  Aligned_cols=141  Identities=16%  Similarity=0.203  Sum_probs=93.7

Q ss_pred             chhhhcCHHHHHHHHHHHHHHHhcC----CCcEEEEeCCCChhhHHHHHHHhC----CC--eEEEeecCCCCCcccchhe
Q 029741           37 ITTLLLDHKAFKDTVDIFVDRYRDM----GISVVAGIEARGFVFGPSIALAIG----AK--FVPLRKPNKLPGEVISEAY  106 (188)
Q Consensus        37 ~~~ll~~~~~~~~l~~~la~~~~~~----~~d~Iv~v~~gG~~~a~~lA~~l~----~p--~~~~~k~~~~~~~~~~~~~  106 (188)
                      ...++.+++.+...+..|++++...    ++++|+|++.||+++|..+|..|+    +|  +.++.+........   ..
T Consensus         3 ~~~~l~~~~~i~~~~~~la~~i~~~~~~~~~~~iv~i~~~G~~~a~~la~~l~~~~~~~~~~~~l~~~~~~~~~~---~~   79 (181)
T 1a3c_A            3 QKAVILDEQAIRRALTRIAHEMIERNKGMNNCILVGIKTRGIYLAKRLAERIEQIEGNPVTVGEIDITLYRDDLS---KK   79 (181)
T ss_dssp             CEEEEECHHHHHHHHHHHHHHHHHHCC----CEEEEESHHHHHHHHHHHHHHHHHHSSCCEEEEEEEECCC---------
T ss_pred             cccCccCHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEcCCCHHHHHHHHHHHhHHhCCCcccCeEEEEEecCccc---cc
Confidence            4456778888888888888887542    578999999999999999999997    44  34444322111100   00


Q ss_pred             eeec-c-ceeEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcC-CeEEEEEEEeeChhhhhccCCCCeEEEEecc
Q 029741          107 VLEY-G-TDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMG-AEVVECACVVGLPEGQRRLDGKPLYILVEPR  183 (188)
Q Consensus       107 ~~~~-~-~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~G-a~~v~v~~l~~~~~~~~~l~~~~~~~l~~~~  183 (188)
                      .... . ...+.+  ....+|++||||||++|||+|+.++++.|+++| ++++.++++++++.  ....-.+-+.-++++
T Consensus        80 ~~~~~~~~~~~~~--~~~~~gk~VllVDDvitTG~Tl~~a~~~L~~~G~a~~V~~~~l~~k~~--~~~~~~~dy~g~~ip  155 (181)
T 1a3c_A           80 TSNDEPLVKGADI--PVDITDQKVILVDDVLYTGRTVRAGMDALVDVGRPSSIQLAVLVDRGH--RELPIRADYIGKNIP  155 (181)
T ss_dssp             --CCCCEEEEEEC--SSCCTTSEEEEEEEEESSSHHHHHHHHHHHHHCCCSEEEEEEEEECCC--CSSSCCCSEEEEECC
T ss_pred             Cccceeeeccccc--CcCCCCCEEEEEeCccCcHHHHHHHHHHHHhcCCCcEEEEEEEEccCC--CcCCCCccEEEEECC
Confidence            0000 0 011111  223689999999999999999999999999997 99999999998862  222212344445555


Q ss_pred             c
Q 029741          184 L  184 (188)
Q Consensus       184 ~  184 (188)
                      +
T Consensus       156 ~  156 (181)
T 1a3c_A          156 T  156 (181)
T ss_dssp             C
T ss_pred             C
Confidence            3

>1nul_A XPRT, xanthine-guanine phosphoribosyltransferase; purine salvage enzym; 1.80A {Escherichia coli} SCOP: c.61.1.1 PDB: 1a96_A* 1a95_A 1a98_A 1a97_A*

Probab=99.73  E-value=2.7e-17  Score=123.34  Aligned_cols=113  Identities=20%  Similarity=0.278  Sum_probs=86.0

Q ss_pred             hhcCHHHHHHHHHHHHHHHhc-CCCcEEEEeCCCChhhHHHHHHHhCCC-eEEEeecCCCCCcccchheeeeccceeEEE
Q 029741           40 LLLDHKAFKDTVDIFVDRYRD-MGISVVAGIEARGFVFGPSIALAIGAK-FVPLRKPNKLPGEVISEAYVLEYGTDRLEM  117 (188)
Q Consensus        40 ll~~~~~~~~l~~~la~~~~~-~~~d~Iv~v~~gG~~~a~~lA~~l~~p-~~~~~k~~~~~~~~~~~~~~~~~~~~~~~l  117 (188)
                      .+.+++.+...+..|++++.. .++++|+|++.||+.+|..+|+.|++| +.+++.... ...        ..+.  +.+
T Consensus         5 ~l~~~~~i~~~~~~La~~i~~~~~~~~vvgi~~Gg~~~a~~la~~l~~~~~~~i~~~~y-~~~--------~~~~--~~~   73 (152)
T 1nul_A            5 YIVTWDMLQIHARKLASRLMPSEQWKGIIAVSRGGLVPGALLARELGIRHVDTVCISSY-DHD--------NQRE--LKV   73 (152)
T ss_dssp             EECCHHHHHHHHHHHHHHHCSGGGCSEEEEEETTTHHHHHHHHHHHTCCCEEEEEEEC-------------------CEE
T ss_pred             EecCHHHHHHHHHHHHHHHHHHcCCCEEEEEcCCCHHHHHHHHHHcCCCcceEEEEEEe-cCc--------ccce--EEE
Confidence            467888899999999999875 357899999999999999999999999 665543321 100        0111  122


Q ss_pred             ecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChhhh
Q 029741          118 HVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQ  168 (188)
Q Consensus       118 ~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~~~  168 (188)
                      ..+...+||+||||||+++||+|+.++++.|++     +.++++++++..+
T Consensus        74 ~~~~~~~gk~VliVDDii~TG~Tl~~a~~~l~~-----v~~a~L~~k~~~~  119 (152)
T 1nul_A           74 LKRAEGDGEGFIVIDDLVDTGGTAVAIREMYPK-----AHFVTIFAKPAGR  119 (152)
T ss_dssp             EECCSSCCTTEEEEEEEECTTSSHHHHHHHCTT-----SEEEEEEECGGGG
T ss_pred             ecCCCCCcCEEEEEEeecCchHHHHHHHHHHhh-----CCEEEEEECCCCc
Confidence            222235999999999999999999999999986     7889999998543

>3ohp_A Hypoxanthine phosphoribosyltransferase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Vibrio cholerae} SCOP: c.61.1.1 PDB: 1g9s_A* 1g9t_A* 1grv_A 1j7j_A

Probab=99.73  E-value=1.4e-16  Score=122.37  Aligned_cols=138  Identities=14%  Similarity=0.183  Sum_probs=95.3

Q ss_pred             hhhcCHHHHHHHHHHHHHHHhcC---CC-cEEEEeCCCChhhHHHHHHHhCCCe--EEEeecCCCCCcccchheeeeccc
Q 029741           39 TLLLDHKAFKDTVDIFVDRYRDM---GI-SVVAGIEARGFVFGPSIALAIGAKF--VPLRKPNKLPGEVISEAYVLEYGT  112 (188)
Q Consensus        39 ~ll~~~~~~~~l~~~la~~~~~~---~~-d~Iv~v~~gG~~~a~~lA~~l~~p~--~~~~k~~~~~~~~~~~~~~~~~~~  112 (188)
                      .++.+++.++..++.|++++.+.   +. ++|+|++.||+.+|..+|..|++|+  .+++....-...     .  ..+.
T Consensus         6 ~~l~s~~~i~~~i~~La~~I~~~~~~~~~~vvVgi~~gG~~~a~~la~~L~~~~~~~~i~~~~y~~~~-----~--~~~~   78 (177)
T 3ohp_A            6 EVMISEQEVAQRIRELGQQITEHYQGSSDLVLVGLLRGSFVFMADLARQIHLTHQVDFMTASSYGNSM-----Q--SSRD   78 (177)
T ss_dssp             EEEECHHHHHHHHHHHHHHHHHHTTTCSCEEEEEETTTTHHHHHHHHHTCCSCCEEEEEEECC---------------CC
T ss_pred             EEeeCHHHHHHHHHHHHHHHHHHcCCCCCeEEEEECcchHHHHHHHHHHcCCCceEEEEEEEEEcCCC-----c--cCCc
Confidence            34667888888888888777532   24 7999999999999999999999986  344433211110     0  0111


Q ss_pred             eeEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChhhhhccCCCCeEEEEeccc
Q 029741          113 DRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQRRLDGKPLYILVEPRL  184 (188)
Q Consensus       113 ~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~~~~~l~~~~~~~l~~~~~  184 (188)
                      ..+........+||+||||||+++||+|+.++++.|+++|++++.++++++++.++ .+.-.+=+.-+++++
T Consensus        79 v~i~~~~~~~~~gk~vliVDDii~TG~Tl~~~~~~l~~~g~~~v~~~~l~~~~~~~-~~~~~~d~~g~~~p~  149 (177)
T 3ohp_A           79 VRILKDLDDDIKGKDVLLVEDIIDTGNTLNKVKEILALREPKSIRICTLLDKPTRR-EVDVEVNWVGFEIPD  149 (177)
T ss_dssp             CCEEECCSSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGGGC-SSCCCCSEEEEECCS
T ss_pred             EEEecCCCcccCCCEEEEEeeEeCcHHHHHHHHHHHHhcCCcEEEEEEEEECCccc-cCCCCccEEEEEcCC
Confidence            12222112235899999999999999999999999999999999999999998643 333122244445554

>3lrt_A Ribose-phosphate pyrophosphokinase; phosphoribosyl transferase, ATP analog binding, ATP-binding, metal-binding, nucleotide biosynthesis; HET: ADP; 1.53A {Thermoplasma volcanium} PDB: 3lpn_A* 3nag_A* 3mbi_A*

Probab=99.72  E-value=1.1e-16  Score=131.42  Aligned_cols=116  Identities=22%  Similarity=0.323  Sum_probs=93.0

Q ss_pred             HHHHHhcCCCcEEEEeCCCChhhHHHHHHHhCCCeEEEeecCCCCCcccchheeeeccceeEEEe-cCCCCCCCEEEEEc
Q 029741           54 FVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMH-VGAIEPGERALVID  132 (188)
Q Consensus        54 la~~~~~~~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~Gk~VLIVD  132 (188)
                      |++++.+.+.++|++++.||+.+|..+|..|++|+.+++|.++.++              .+.+. .....+||+|+|||
T Consensus       145 la~~i~~~~~~vVV~pd~Gg~~~A~~lA~~L~~p~~~i~K~r~~~g--------------~v~i~~~~~dv~gk~vliVD  210 (286)
T 3lrt_A          145 IVRYYKNVDVDYVVSPDDGGLARVADISAKLGKKHFFIEKKRIDDR--------------TVEMKVPNVDVNGKKLLIVD  210 (286)
T ss_dssp             HHHHHTTSCCSEEEESSSSSHHHHHHHHHHHTCEEEEEEEEEETTE--------------EEEEEESCCCCTTCEEEEEE
T ss_pred             HHHHHHhcCCCEEEEECCCccHHHHHHHHHhCCCeEEEeeeecCCC--------------cEEEeeccccCCcCEEEEEe
Confidence            3444444577899999999999999999999999998887653221              11211 12235999999999


Q ss_pred             CcccchHHHHHHHHHHHHcCCeEEEEEEEeeChh--hhhccCCCCeEEEEeccc
Q 029741          133 DLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLDGKPLYILVEPRL  184 (188)
Q Consensus       133 Dvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~--~~~~l~~~~~~~l~~~~~  184 (188)
                      |+++||+|+.++++.|+++|+++++++++|+...  +.++| ..++..++..+.
T Consensus       211 Dii~TG~Tl~~a~~~L~~~Ga~~v~~~~th~v~s~~a~~~l-~s~i~~vv~Tnt  263 (286)
T 3lrt_A          211 DIISTGGTIAKSSGLLREKGASKIYVSAVHGLFVNGSENKI-LQNADEIHVTDT  263 (286)
T ss_dssp             EEESSCHHHHHHHHHHHHTTCSEEEEEEEEECCCTTHHHHH-TTTCSEEEEESS
T ss_pred             ccccccHHHHHHHHHHHhCCCCEEEEEEEEeecCchHHHHH-HcCCCEEEEecC
Confidence            9999999999999999999999999999999754  67788 778888887765

>1wd5_A Hypothetical protein TT1426; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; HET: MES; 2.00A {Thermus thermophilus} SCOP: c.61.1.1

Probab=99.71  E-value=1e-16  Score=125.88  Aligned_cols=122  Identities=27%  Similarity=0.425  Sum_probs=83.1

Q ss_pred             CCcEEEEeCCCChhhHHHHHHHhCCCeEE--EeecCCCC------------Ccc-cc--------hheee-----e---c
Q 029741           62 GISVVAGIEARGFVFGPSIALAIGAKFVP--LRKPNKLP------------GEV-IS--------EAYVL-----E---Y  110 (188)
Q Consensus        62 ~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~--~~k~~~~~------------~~~-~~--------~~~~~-----~---~  110 (188)
                      +.++|++++.||+++|..+|..|++|+..  ++|.++..            +.. +.        +.+-.     .   .
T Consensus        23 ~~~vVv~v~rGg~~~A~~la~~l~~p~~~~~~rk~~~~~~~e~~~ga~s~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~  102 (208)
T 1wd5_A           23 EAPVVLGLPRGGVVVADEVARRLGGELDVVLVRKVGAPGNPEFALGAVGEGGELVLMPYALRYADQSYLEREAARQRDVL  102 (208)
T ss_dssp             CSCEEEECTTHHHHHHHHHHHHHTCEEEECCEEEEEETTEEEEEEEEEETTCCEEECTTHHHHSCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHhCCCeEEEEEEEecCCCCchhhcceecCCCcEEechhhhcccCHHHHHHHHHHHHHHH
Confidence            57899999999999999999999999865  45443211            100 00        00000     0   0


Q ss_pred             cc--eeEE-EecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChhhhhccCCC-CeEEEEecc
Q 029741          111 GT--DRLE-MHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQRRLDGK-PLYILVEPR  183 (188)
Q Consensus       111 ~~--~~~~-l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~~~~~l~~~-~~~~l~~~~  183 (188)
                      ..  ..+. .......+||+||||||+++||+|+.++++.|+++|+++|.+++++..+++.++|... .+..+.+.+
T Consensus       103 ~~r~~~~~~~~~~~~~~gk~VllVDDvi~TG~Tl~~a~~~L~~~ga~~V~v~~~v~~~~~~~~l~~~~~~v~~~~~~  179 (208)
T 1wd5_A          103 RKRAERYRRVRPKAARKGRDVVLVDDGVATGASMEAALSVVFQEGPRRVVVAVPVASPEAVERLKARAEVVALSVPQ  179 (208)
T ss_dssp             HHHHHHHHHHSCCCCCTTSEEEEECSCBSSCHHHHHHHHHHHTTCCSEEEEEEEEBCHHHHHHHHTTSEEEEEECCT
T ss_pred             HHHHHHhhccCCCCCCCCCEEEEECCCccHHHHHHHHHHHHHHcCCCEEEEEEEEcCHHHHHHhcccCcEEEEecCc
Confidence            00  0000 0011235899999999999999999999999999999999999999998776666422 565655543

>1ufr_A TT1027, PYR mRNA-binding attenuation protein; pyrimidine nucleotide biosynthesis, transcriptional attenuation, RNA-binding protein; 2.60A {Thermus thermophilus} SCOP: c.61.1.1

Probab=99.69  E-value=2.3e-16  Score=121.27  Aligned_cols=121  Identities=17%  Similarity=0.148  Sum_probs=84.7

Q ss_pred             hhcCHHHHHHHHHHHHHHHhc----CCCcEEEEeCCCChhhHHHHHHHhC----CCeE--EEeecCCCCCcccchheeee
Q 029741           40 LLLDHKAFKDTVDIFVDRYRD----MGISVVAGIEARGFVFGPSIALAIG----AKFV--PLRKPNKLPGEVISEAYVLE  109 (188)
Q Consensus        40 ll~~~~~~~~l~~~la~~~~~----~~~d~Iv~v~~gG~~~a~~lA~~l~----~p~~--~~~k~~~~~~~~~~~~~~~~  109 (188)
                      ++.+++.+......|++++..    .+.++|+|++.+|+++|..+|..++    +|+.  .+++....... .  .....
T Consensus         6 ~l~~~~~i~~~~~~La~~i~~~~~~~~~~~iv~v~~rG~~~a~~la~~l~~~~~~~~~~~~l~~~~~~~~~-~--~~~~~   82 (181)
T 1ufr_A            6 ELMNAPEMRRALYRIAHEIVEANKGTEGLALVGIHTRGIPLAHRIARFIAEFEGKEVPVGVLDITLYRDDL-T--EIGYR   82 (181)
T ss_dssp             EEEEHHHHHHHHHHHHHHHHHHHTSSTTEEEEEETTTHHHHHHHHHHHHHHHHCSCCCEEEEEEEC--------------
T ss_pred             eecCHHHHHHHHHHHHHHHHHHcCCCCCeEEEEECCCChHHHHHHHHHHhHHhCCCcccCeEEEEEecCcc-c--ccccc
Confidence            456777777777777776643    2467999999999999999999987    7763  34332211000 0  00000


Q ss_pred             ccceeEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcC-CeEEEEEEEeeCh
Q 029741          110 YGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMG-AEVVECACVVGLP  165 (188)
Q Consensus       110 ~~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~G-a~~v~v~~l~~~~  165 (188)
                      .....+.+  ....+|++||||||++|||+|+.++++.|+++| ++++.++++++++
T Consensus        83 ~~~~~~~~--~~~~~gk~VllVDDvitTG~Tl~~a~~~L~~~G~a~~V~~~~l~~~~  137 (181)
T 1ufr_A           83 PQVRETRI--PFDLTGKAIVLVDDVLYTGRTARAALDALIDLGRPRRIYLAVLVDRG  137 (181)
T ss_dssp             CEEEEEEE--CSCCTTCEEEEEEEEESSSHHHHHHHHHHHHHCCCSEEEEEEEEECC
T ss_pred             ceeccccc--CcCCCCCEEEEEecCCCcHHHHHHHHHHHHhcCCCcEEEEEEEEcCC
Confidence            00011222  223589999999999999999999999999999 9999999999987

>1u9y_A RPPK;, ribose-phosphate pyrophosphokinase; PRPP synthase, transferase; 2.65A {Methanocaldococcus jannaschii} SCOP: c.61.1.2 c.61.1.2 PDB: 1u9z_A*

Probab=99.67  E-value=1.7e-16  Score=130.27  Aligned_cols=121  Identities=21%  Similarity=0.316  Sum_probs=89.8

Q ss_pred             HHHHHHHHhc-CCCcEEEEeCCCChhhHHHHHHHhCCCeEEEeecCCCCCcccchheeeeccceeEEEecCCCCCCCEEE
Q 029741           51 VDIFVDRYRD-MGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERAL  129 (188)
Q Consensus        51 ~~~la~~~~~-~~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gk~VL  129 (188)
                      +..|++++.+ .+.++|++++.||+.+|..+|..+++|+.+++|+++.+.            ...+.+. +...+||+|+
T Consensus       143 ~~~La~~i~~~~~~~vVv~pd~Gg~~~a~~la~~l~~p~~~i~k~r~~~~------------~~~~~l~-g~~v~Gk~Vl  209 (284)
T 1u9y_A          143 VPKLAEYVKDKLNDPIVLAPDKGALEFAKTASKILNAEYDYLEKTRLSPT------------EIQIAPK-TLDAKDRDVF  209 (284)
T ss_dssp             HHHHHHHHTTTCSSCEEEESSGGGHHHHHHHHHHHTCCEEEBC----------------------CCBS-SCCCTTCCEE
T ss_pred             HHHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHhCCCEEEEEEEEcCCC------------eEEEEec-CccCCCCEEE
Confidence            3444444443 356799999999999999999999999988776653211            0111121 2236999999


Q ss_pred             EEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChh--hhhccCCCCeEEEEeccc
Q 029741          130 VIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLDGKPLYILVEPRL  184 (188)
Q Consensus       130 IVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~--~~~~l~~~~~~~l~~~~~  184 (188)
                      ||||+++||+|+.++++.|+++|++++.++++|....  +.++++..+++.++..+.
T Consensus       210 IVDDii~TG~Tl~~aa~~Lk~~Ga~~V~~~~~h~v~s~~a~~~l~~~~i~~vv~t~t  266 (284)
T 1u9y_A          210 IVDDIISTGGTMATAVKLLKEQGAKKIIAACVHPVLIGDALNKLYSAGVEEVVGTDT  266 (284)
T ss_dssp             EEEEECSSSHHHHHHHHHHHHTTCCSEEEEEEECCCCTTHHHHHHHHTCSEEEEETT
T ss_pred             EEecccCchHHHHHHHHHHHHCCCcEEEEEEEeEecCcHHHHHHHhCCCCEEEEeCC
Confidence            9999999999999999999999999999999987643  677787556888887765

>2xbu_A Hypoxanthine-guanine phosphoribosyltransferase; glycosyltransferase, purine salvage, FLIP pepti; HET: 5GP; 1.80A {Saccharomyces cerevisiae} PDB: 2jkz_A* 2jky_A*

Probab=99.66  E-value=7.6e-16  Score=122.17  Aligned_cols=128  Identities=13%  Similarity=0.145  Sum_probs=89.0

Q ss_pred             hhhcCHHHHHHHHHHHHHHHhcCCCcEEEEeCCCChhhHHHHHHHhCC------CeEEEeecCCCCCcccchheeeeccc
Q 029741           39 TLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGA------KFVPLRKPNKLPGEVISEAYVLEYGT  112 (188)
Q Consensus        39 ~ll~~~~~~~~l~~~la~~~~~~~~d~Iv~v~~gG~~~a~~lA~~l~~------p~~~~~k~~~~~~~~~~~~~~~~~~~  112 (188)
                      .++.+.+.+...++.|++++.+.++++|+|++.||+++|..||..|++      |+.++....+........ .....+.
T Consensus         6 ~~~is~~~i~~~i~~LA~~I~~~~~~vIVgI~~GG~~~A~~La~~L~~~~~~~lpi~~i~~s~y~~~~~~~~-~~~~~g~   84 (221)
T 2xbu_A            6 KQYISYNNVHQLCQVSAERIKNFKPDLIIAIGGGGFIPARILRTFLKEPGVPTIRIFAIILSLYEDLNSVGS-EVEEVGV   84 (221)
T ss_dssp             CEECCHHHHHHHHHHHHHHHTTTCCSEEEEEHHHHHHHHHHHHHHHCCTTSCCCEEEEEEEEEEC--------------C
T ss_pred             eEecCHHHHHHHHHHHHHHhccCCCCEEEEECCCcHHHHHHHHHHhCCCCCCCccEEEEEEEEecCCccccc-cccccCc
Confidence            456788888899999999996557899999999999999999999998      344443211100000000 0000011


Q ss_pred             eeEE---Ee---cCCCCCCCEEEEEcCcccchHHHHHHHHHHHH--------cCC---------eEEEEEEEeeChhh
Q 029741          113 DRLE---MH---VGAIEPGERALVIDDLVATGGTLSAAVRLLER--------MGA---------EVVECACVVGLPEG  167 (188)
Q Consensus       113 ~~~~---l~---~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~--------~Ga---------~~v~v~~l~~~~~~  167 (188)
                      ..+.   +.   .....+||+||||||+++||+||.++++.|++        .|+         +.+.++++++++..
T Consensus        85 ~~~~~~~~~~~~~~~~v~Gk~VLIVDDIidTG~Tl~aa~~~L~~~ga~~~~~~g~~~~~~~~~~~~v~iavL~~K~~~  162 (221)
T 2xbu_A           85 KVSRTQWIDYEQCKLDLVGKNVLIVDEVDDTRTTLHYALSELEKDAAEQAKAKGIDTEKSPEMKTNFGIFVLHDKQKP  162 (221)
T ss_dssp             EEEEEECCCHHHHTCCCTTCEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHHTTCCTTTCGGGSCEEEEEEEEEECSC
T ss_pred             eeeeeeeeecccccccCCCCEEEEEeccCCcHHHHHHHHHHHHhhcchhhhhcCccccccccCcceEEEEEEEecccc
Confidence            1111   11   02346999999999999999999999999997        786         58999999999753

>3s5j_B Ribose-phosphate pyrophosphokinase 1; nucleotide synthesis, transferase; 2.02A {Homo sapiens} PDB: 2hcr_A* 3efh_A 2h06_A 2h07_A 2h08_A

Probab=99.66  E-value=4.9e-16  Score=129.45  Aligned_cols=122  Identities=22%  Similarity=0.253  Sum_probs=91.5

Q ss_pred             HHHHHHHHHhcCCCcEEEEeCCCChhhHHHHHHHhCCCeEEEeecCCCCCcccchheeeeccceeEEEecCCCCCCCEEE
Q 029741           50 TVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERAL  129 (188)
Q Consensus        50 l~~~la~~~~~~~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gk~VL  129 (188)
                      +++.+.+.+.+.+.++|++++.||+.+|..+|+.|++|+.+++|.++.++..           ....+. +. .+||+|+
T Consensus       151 l~~~i~~~~~~~~~~vVVspd~Ggv~~A~~lA~~L~~~~~~i~K~r~~~~~v-----------~~~~l~-g~-v~gk~vi  217 (326)
T 3s5j_B          151 VLKWIRENISEWRNCTIVSPDAGGAKRVTSIADRLNVDFALIHKERKKANEV-----------DRMVLV-GD-VKDRVAI  217 (326)
T ss_dssp             HHHHHHHHCTTGGGCEEEESSGGGHHHHHHHHHHHTCEEEEEEEC------------------CCEEEE-SC-CTTSEEE
T ss_pred             HHHHHHHhcCcCCCcEEEEECCCchHHHHHHHHHcCCCEEEEEEEecCCCee-----------eEEecc-cc-CCCCEEE
Confidence            4444444443334579999999999999999999999999988876432221           011221 33 5999999


Q ss_pred             EEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChh--hhhccCCCCeEEEEeccc
Q 029741          130 VIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLDGKPLYILVEPRL  184 (188)
Q Consensus       130 IVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~--~~~~l~~~~~~~l~~~~~  184 (188)
                      ||||+++||+|+.++++.|+++|++++.++++|....  +.++|++.+++.++..+.
T Consensus       218 IVDDii~TG~Tl~~a~~~L~~~Ga~~v~~~~tH~v~~~~a~e~l~~~~i~~vv~t~t  274 (326)
T 3s5j_B          218 LVDDMADTCGTICHAADKLLSAGATRVYAILTHGIFSGPAISRINNACFEAVVVTNT  274 (326)
T ss_dssp             EEEEEESSCHHHHHHHHHHHHTTCSEEEEEEEEECCCTTHHHHHHHSCCSEEEEETT
T ss_pred             EEccccCCcHHHHHHHHHHHHcCCCEEEEEEEecccCchHHHHHhhCCCCEEEEecC
Confidence            9999999999999999999999999999999988643  677787667777776654

>3acd_A Hypoxanthine-guanine phosphoribosyltransferase; rossmann fold, structural genomics, NPPSFA; HET: IMP; 1.89A {Thermus thermophilus} PDB: 3acc_A* 3acb_A*

Probab=99.64  E-value=5.2e-15  Score=113.95  Aligned_cols=140  Identities=19%  Similarity=0.164  Sum_probs=94.4

Q ss_pred             chhhhcCHHHHHHHHHHHHHHHhcC---CCcEEEEeCCCChhhHHHHHHHhCCCeEE--EeecCCCCCcccchheeeecc
Q 029741           37 ITTLLLDHKAFKDTVDIFVDRYRDM---GISVVAGIEARGFVFGPSIALAIGAKFVP--LRKPNKLPGEVISEAYVLEYG  111 (188)
Q Consensus        37 ~~~ll~~~~~~~~l~~~la~~~~~~---~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~--~~k~~~~~~~~~~~~~~~~~~  111 (188)
                      ...++.+.+.++.....||+++.+.   +..+++|+..||+.+|..|+..++.|...  +.-.......       ...+
T Consensus         9 ~~~vlis~~~I~~~i~rlA~eI~e~~~~~~~vlvgIl~Gg~~fa~~L~~~l~~~~~~~~i~~ssy~~~~-------~~~g   81 (181)
T 3acd_A            9 NGPVQISAEAIKKRVEELGGEIARDYQGKTPHLICVLNGAFIFMADLVRAIPLPLTMDFIAISSYGNAF-------KSSG   81 (181)
T ss_dssp             SSSCCBCHHHHHHHHHHHHHHHHHHTTTCCCEEEEEETTTHHHHHHHHTTCCSCCEEEEEEEC-----------------
T ss_pred             CccEEeCHHHHHHHHHHHHHHHHHHhCCCCcEEEEEecCcHHHHHHHHHhcCCCccccceEEEEecCCc-------CCCC
Confidence            3456678877777777777666432   45689999999999999999999988633  2221110000       0011


Q ss_pred             ceeEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChhhhhccCCCCeEEEEeccc
Q 029741          112 TDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQRRLDGKPLYILVEPRL  184 (188)
Q Consensus       112 ~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~~~~~l~~~~~~~l~~~~~  184 (188)
                      ...+........+||+|||||||++||.|+.++.+.|.+.|++.+.++++++++.. .++.=.+=+.-.++++
T Consensus        82 ~~~~~~~~~~~i~gk~VllVDDIldTG~Tl~~~~~~l~~~~p~sv~~avLl~K~~~-r~~pi~~DyvG~~ipd  153 (181)
T 3acd_A           82 EVELLKDLRLPIHGRDVIVVEDIVDTGLTLSYLLDYLEARKPASVRVAALLSKPSR-RQVEVPIHYLGFEIED  153 (181)
T ss_dssp             --CEEECCCSCCTTCEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEEECGGG-CSSCCCCSEEEEECCS
T ss_pred             ceEeccCCCcccCCCeeEEEEEEEcCchhHHHHHHHHhcCCCCEEEEEEEEEcCcc-ccCCCCCCEEEEECCC
Confidence            11222222334699999999999999999999999999999999999999998753 3333112244556655

>3dah_A Ribose-phosphate pyrophosphokinase; pyrophosphoki seattle structural genomics center for infectious disease, magnesium, metal binding; HET: AMP; 2.30A {Burkholderia pseudomallei}

Probab=99.63  E-value=1.2e-15  Score=126.76  Aligned_cols=110  Identities=21%  Similarity=0.274  Sum_probs=81.5

Q ss_pred             CCcEEEEeCCCChhhHHHHHHHhCCCeEEEeecCCCCCcccchheeeeccceeEEEecCCCCCCCEEEEEcCcccchHHH
Q 029741           62 GISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTL  141 (188)
Q Consensus        62 ~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl  141 (188)
                      +.++|++++.||+.+|..+|+.|++|+.+++|+++.++..           ....+. +. .+||+|+||||+++||+|+
T Consensus       166 ~~~vVVspd~Ggv~~A~~lA~~L~~p~~~i~K~r~~~~~v-----------~~~~i~-g~-v~gk~viiVDDii~TG~Tl  232 (319)
T 3dah_A          166 PDLLVVSPDVGGVVRARALAKQLNCDLAIIDKRRPKANVA-----------EVMNII-GE-VEGRTCVIMDDMVDTAGTL  232 (319)
T ss_dssp             TTEEEECCSSTTHHHHHHHHHHTTCEEEC---------------------------------CCSEEEEEEEEESSCHHH
T ss_pred             CCcEEEEeCCCccHHHHHHHHHhCCCEEEEEEEeccCCce-----------EEEEcc-cc-CCCCEEEEEecccCchHHH
Confidence            5579999999999999999999999998887766432211           011221 33 5899999999999999999


Q ss_pred             HHHHHHHHHcCCeEEEEEEEeeCh--hhhhccCCCCeEEEEeccc
Q 029741          142 SAAVRLLERMGAEVVECACVVGLP--EGQRRLDGKPLYILVEPRL  184 (188)
Q Consensus       142 ~~~~~~L~~~Ga~~v~v~~l~~~~--~~~~~l~~~~~~~l~~~~~  184 (188)
                      .++++.|+++|++++.++++|...  .+.++|++..++.++..+.
T Consensus       233 ~~a~~~L~~~Ga~~v~~~~tH~v~s~~a~~~l~~~~i~~vv~t~t  277 (319)
T 3dah_A          233 CKAAQVLKERGAKQVFAYATHPVLSGGAADRIAASALDELVVTDT  277 (319)
T ss_dssp             HHHHHHHHHTTCSCEEEEEEEECCCTTHHHHHHTSSCSEEEEESS
T ss_pred             HHHHHHHHHcCCCEEEEEEEeecCChHHHHHHHhCCCCEEEEecc
Confidence            999999999999999999999863  3778887777888877665

>2ji4_A Phosphoribosyl pyrophosphate synthetase-associated protein 2; phosphorylation, nucleotide biosynthesis, transferase; 2.55A {Homo sapiens} PDB: 2c4k_A*

Probab=99.62  E-value=9.4e-16  Score=130.38  Aligned_cols=134  Identities=14%  Similarity=0.158  Sum_probs=88.6

Q ss_pred             HHHHHHHHHHhcCCCcEEEEeCCCChhhHHHHHHHhCCCeEEEeecCCCCC----------cccchheeeeccc------
Q 029741           49 DTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPG----------EVISEAYVLEYGT------  112 (188)
Q Consensus        49 ~l~~~la~~~~~~~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~~~k~~~~~~----------~~~~~~~~~~~~~------  112 (188)
                      .+++.+.+.+.+.+.++|++++.||+++|..+|+.|++|+.+++|++....          ......+..+++.      
T Consensus       178 ~La~~I~~~~~~~~~~vVV~pd~GGv~~A~~lA~~L~~pl~ii~k~r~~~~~e~~~gr~~~~~v~~~~~~~~g~~i~~~~  257 (379)
T 2ji4_A          178 FLLQYIQEEIPDYRNAVIVAKSPASAKRAQSFAERLRLGIAVIHGEAQDAESDLVDGRHSPPMVRSVAAIHPSLEIPMLI  257 (379)
T ss_dssp             HHHHHHHHHSTTGGGEEEEESSGGGHHHHHHHHHHTTCEEEEEC------------------------------------
T ss_pred             HHHHHHHHhcccCCCcEEEEEccchHHHHHHHHHHhCCCEEEEEEEeecccccccccccCCcccccccccccccchhhhh
Confidence            344444444433346799999999999999999999999988866542110          0000000000000      


Q ss_pred             ----eeEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeCh--hhhhccCCCCeEEEEeccc
Q 029741          113 ----DRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLP--EGQRRLDGKPLYILVEPRL  184 (188)
Q Consensus       113 ----~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~--~~~~~l~~~~~~~l~~~~~  184 (188)
                          ..+.+. + ..+||+|+||||+++||+|+.++++.|++.|++.+.++++|...  ++.++|+...++.++..+.
T Consensus       258 ~~~~~~~~l~-g-~v~Gk~viiVDDii~TG~Tl~~a~~~L~~~Ga~~v~~~~tH~v~s~~a~~~l~~s~id~vvvTnt  333 (379)
T 2ji4_A          258 PKEKPPITVV-G-DVGGRIAIIVDDIIDDVDSFLAAAETLKERGAYKIFVMATHGLLSSDAPRRIEESAIDEVVVTNT  333 (379)
T ss_dssp             -----CCCEE-S-CCTTSEEEEEEEEECSCHHHHHHHHHHHHTTCCEEEEEEEEECCCTTHHHHHHHSSCCEEEEESS
T ss_pred             hhcccccccc-c-CCCCCEEEEEecCCCchHHHHHHHHHHHhcCCCEEEEEEEeecCCcHHHHHHHhCCCCEEEEecC
Confidence                000111 2 36999999999999999999999999999999999999998853  3677776556777766654

>1dku_A Protein (phosphoribosyl pyrophosphate synthetase); open alpha-beta structure, domain duplication, phosphoribosyltransferase type I fold; HET: AP2 ABM; 2.20A {Bacillus subtilis} SCOP: c.61.1.2 c.61.1.2 PDB: 1dkr_A* 1ibs_A*

Probab=99.62  E-value=3.1e-15  Score=124.49  Aligned_cols=110  Identities=22%  Similarity=0.302  Sum_probs=84.6

Q ss_pred             CCcEEEEeCCCChhhHHHHHHHhCCCeEEEeecCCCCCcccchheeeeccceeEEEecCCCCCCCEEEEEcCcccchHHH
Q 029741           62 GISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTL  141 (188)
Q Consensus        62 ~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl  141 (188)
                      +..+|++++.||+.+|..+|..|++|+..++|.+.....           ...+.+. + ..+||+|+||||++|||+|+
T Consensus       167 ~~~vVv~pd~Gg~~~A~~la~~L~~p~~~l~k~r~~~~~-----------~~~~~l~-~-~v~gk~VlLVDDiitTG~Tl  233 (317)
T 1dku_A          167 EDIVIVSPDHGGVTRARKLADRLKAPIAIIDKRRPRPNV-----------AEVMNIV-G-NIEGKTAILIDDIIDTAGTI  233 (317)
T ss_dssp             CSEEEEESSGGGHHHHHHHHHHTTCCEEEEECC--------------------CEEE-S-CCTTCEEEEECSEESSCHHH
T ss_pred             CCcEEEEeCcchHHHHHHHHHHhCCCEEEEEEEeccccc-----------eeEEEec-c-cCCCCEEEEEecccCCCHHH
Confidence            456899999999999999999999999887765431110           1112222 3 35999999999999999999


Q ss_pred             HHHHHHHHHcCCeEEEEEEEeeChh--hhhccCCCCeEEEEeccc
Q 029741          142 SAAVRLLERMGAEVVECACVVGLPE--GQRRLDGKPLYILVEPRL  184 (188)
Q Consensus       142 ~~~~~~L~~~Ga~~v~v~~l~~~~~--~~~~l~~~~~~~l~~~~~  184 (188)
                      .++++.|+++|+++|.++++|....  +.++++...+..++..+.
T Consensus       234 ~~aa~~Lk~~Ga~~V~~~~tH~v~~~~a~~~l~~~~i~~vv~t~t  278 (317)
T 1dku_A          234 TLAANALVENGAKEVYACCTHPVLSGPAVERINNSTIKELVVTNS  278 (317)
T ss_dssp             HHHHHHHHHTTCSEEEEECSEECCCTTHHHHHHTSSEEEEEEETT
T ss_pred             HHHHHHHHHcCCcEEEEEEECcccChHHHHHHhhCCCCEEEEeCC
Confidence            9999999999999999999666543  666777667887777665

>1w30_A PYRR bifunctional protein; transferase, glycosyltransferase, PSI, protein structure initiative, TB structural genomics consortium, TB; 1.9A {Mycobacterium tuberculosis} SCOP: c.61.1.1

Probab=99.61  E-value=2.8e-15  Score=117.23  Aligned_cols=123  Identities=16%  Similarity=0.174  Sum_probs=85.4

Q ss_pred             hhhhcCHHHHHHHHHHHHHHHhc-----------CCCcEEEEeCCCChhhHHHHHHHh----CCCeE--EEeecCCCCCc
Q 029741           38 TTLLLDHKAFKDTVDIFVDRYRD-----------MGISVVAGIEARGFVFGPSIALAI----GAKFV--PLRKPNKLPGE  100 (188)
Q Consensus        38 ~~ll~~~~~~~~l~~~la~~~~~-----------~~~d~Iv~v~~gG~~~a~~lA~~l----~~p~~--~~~k~~~~~~~  100 (188)
                      ..++.+++.++...+.|++.+.+           .+.++|+|++.||+++|..+|..|    ++|+.  ++.........
T Consensus        13 ~~~l~~~~~i~~~i~~La~~i~~~~~~~~~~~~~~~~~vvvgi~~gG~~~a~~La~~L~~~~g~p~~~~~l~~~~y~~~~   92 (201)
T 1w30_A           13 SRELMSAANVGRTISRIAHQIIEKTALDDPVGPDAPRVVLLGIPTRGVTLANRLAGNITEYSGIHVGHGALDITLYRDDL   92 (201)
T ss_dssp             EEEEECHHHHHHHHHHHHHHHHHHTTTTSCCBTTBCCEEEEECTTHHHHHHHHHHHHHHHHHSCCCEEEECCCGGGCC--
T ss_pred             ceEEeCHHHHHHHHHHHHHHHHHHccccccccccCCCcEEEEEcccHHHHHHHHHHHHhHHHCCCcccceEEEEEecCCc
Confidence            34677888888777777776643           246799999999999999999999    46642  22221110000


Q ss_pred             ccchheeeeccceeEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcC-CeEEEEEEEeeCh
Q 029741          101 VISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMG-AEVVECACVVGLP  165 (188)
Q Consensus       101 ~~~~~~~~~~~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~G-a~~v~v~~l~~~~  165 (188)
                          ..........+.+. ....+|++||||||+++||+|+.++++.|+++| ++++.++++++++
T Consensus        93 ----~~~~~~~~~~~~~~-~~~~~gk~VlLVDDVitTG~Tl~aa~~~L~~~G~a~~V~vavlv~k~  153 (201)
T 1w30_A           93 ----MIKPPRPLASTSIP-AGGIDDALVILVDDVLYSGRSVRSALDALRDVGRPRAVQLAVLVDRG  153 (201)
T ss_dssp             ----------CCCCCBCC-TTCSTTCEEEEEEEEESSSHHHHHHHHHHHHHCCCSEEEEEEEEECC
T ss_pred             ----cccccceeecccCC-CccCCCCEEEEECCccchHHHHHHHHHHHHhCCCCcEEEEEEEEecC
Confidence                00000000011111 122589999999999999999999999999999 9999999999986

>1ecf_A Glutamine phosphoribosylpyrophosphate amidotransf; purine biosynthesis, transferase, glycosyltransferase, gluta amidotransferase; HET: PIN; 2.00A {Escherichia coli} SCOP: c.61.1.1 d.153.1.1 PDB: 1ecb_A* 1ecc_A* 1ecg_A* 1ecj_A*

Probab=99.58  E-value=4.8e-15  Score=130.40  Aligned_cols=116  Identities=19%  Similarity=0.207  Sum_probs=78.8

Q ss_pred             HHHHHHHHHHHHhcCCCcEEEEeCCCChhhHHHHHHHhCCCeEE-EeecCCCCCcccchheeeec-c-ceeEEEecCCCC
Q 029741           47 FKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVP-LRKPNKLPGEVISEAYVLEY-G-TDRLEMHVGAIE  123 (188)
Q Consensus        47 ~~~l~~~la~~~~~~~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~-~~k~~~~~~~~~~~~~~~~~-~-~~~~~l~~~~~~  123 (188)
                      .+.+++.+.+.+.+.++|+|+++|.+|+.+|..+|..+++|+.. +.|++.....++..+...+. + ...+... ....
T Consensus       279 g~~La~~i~~~~~~~~~dvVv~vP~~g~~~A~~la~~lg~p~~~~~~k~r~~~~t~i~~~~~~R~~~v~~~~~~~-~~~v  357 (504)
T 1ecf_A          279 GTKLGEKIAREWEDLDIDVVIPIPETSCDIALEIARILGKPYRQGFVKNRYVGRTFIMPGQQLRRKSVRRKLNAN-RAEF  357 (504)
T ss_dssp             HHHHHHHHHHHTTTCCCCEEEECTTTTHHHHHHHHHHHTCCBCCCEEECSCCCCCCCCSSSCCCCCCSTTTEEEC-GGGT
T ss_pred             HHHHHHHHHHHcCCCCCeEEEEECCcHHHHHHHHHHHhCCCceeeEEEecccCCceeCccHHHHHHHHHhhhccc-cccC
Confidence            33444444433333457999999999999999999999999862 33333322221111111110 1 1123321 2236


Q ss_pred             CCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEee
Q 029741          124 PGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVG  163 (188)
Q Consensus       124 ~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~  163 (188)
                      +||+||||||+++||+|+.++++.|+++||++|.+++++.
T Consensus       358 ~Gk~VllVDDii~TG~Tl~~~~~~L~~~Ga~~V~~~~l~~  397 (504)
T 1ecf_A          358 RDKNVLLVDDSIVRGTTSEQIIEMAREAGAKKVYLASAAP  397 (504)
T ss_dssp             TTCCEEEEESCCSSSHHHHHHHHHHHHTTCSSEEEEESSC
T ss_pred             CCCeEEEEeccccccHHHHHHHHHHHhcCCcEEEEEEEec
Confidence            9999999999999999999999999999999999998864

>1ao0_A Glutamine phosphoribosylpyrophosphate amidotransferase; glutamine amidotransferase, prtase, purine biosynthesis, phosphoribosyltransferase; HET: 5GP ADP; 2.80A {Bacillus subtilis} SCOP: c.61.1.1 d.153.1.1 PDB: 1gph_1*

Probab=99.50  E-value=3e-14  Score=123.97  Aligned_cols=115  Identities=22%  Similarity=0.259  Sum_probs=82.0

Q ss_pred             HHHHHHHHHHHHHhcCCCcEEEEeCCCChhhHHHHHHHhCCCeEE-EeecCCCCCcccchheeee-cc-ceeEEEecCCC
Q 029741           46 AFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVP-LRKPNKLPGEVISEAYVLE-YG-TDRLEMHVGAI  122 (188)
Q Consensus        46 ~~~~l~~~la~~~~~~~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~-~~k~~~~~~~~~~~~~~~~-~~-~~~~~l~~~~~  122 (188)
                      ....+++.|++.+. .+.|+|+++|.+|..+|..+|..+++|+.. +.|++.....+...+...+ .+ ...+.... ..
T Consensus       258 ~r~~lg~~La~~~~-~~~DvVV~VP~~g~~~A~~la~~lg~p~~~~l~k~r~~~~~~~~~~~~~R~~~~~~~~~~~~-~~  335 (459)
T 1ao0_A          258 ARKNLGKMLAQESA-VEADVVTGVPDSSISAAIGYAEATGIPYELGLIKNRYVGRTFIQPSQALREQGVRMKLSAVR-GV  335 (459)
T ss_dssp             HHHHHHHHHHHHHC-CCCSEEECCTTTTHHHHHHHHHHHCCCBCCCEEECTTCCTTSCCCCHHHHHHTCCSSEEECH-HH
T ss_pred             HHHHHHHHHHHhcc-cCCcEEEEECCcHHHHHHHHHHHhCCCCceeEEEecCCCccccCCCHHHHHhhhhhhccccc-cc
Confidence            55677888887764 367899999999999999999999999863 4444432111111100000 01 11233211 23


Q ss_pred             CCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEe
Q 029741          123 EPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVV  162 (188)
Q Consensus       123 ~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~  162 (188)
                      .+||+||||||++|||+|+.++++.|+++||++|.+++++
T Consensus       336 v~gk~VlLVDDvitTG~Tl~~a~~~L~~~Ga~~V~~~~l~  375 (459)
T 1ao0_A          336 VEGKRVVMVDDSIVRGTTSRRIVTMLREAGATEVHVKISS  375 (459)
T ss_dssp             HTTCEEEEEESCCSSSHHHHHHHHHHHHTTCSEEEEEESS
T ss_pred             CCCCeEEEEeeeecCHHHHHHHHHHHHHcCCCEEEEEEec
Confidence            5899999999999999999999999999999999999854

>1dqn_A Guanine phosphoribosyltransferase; protein-inhibitor complex, Mg IONS, pyrophosphate, transition state analogue; HET: IMU; 1.75A {Giardia intestinalis} SCOP: c.61.1.1 PDB: 1dqp_A*

Probab=99.38  E-value=2.5e-13  Score=108.18  Aligned_cols=114  Identities=9%  Similarity=0.133  Sum_probs=82.5

Q ss_pred             chhhhcCHHHHHHHHHHHHHHHhc---C--CCcEEEEeCCCChhhHHHHHHHhCCCeEE--EeecCCCCCcccchheeee
Q 029741           37 ITTLLLDHKAFKDTVDIFVDRYRD---M--GISVVAGIEARGFVFGPSIALAIGAKFVP--LRKPNKLPGEVISEAYVLE  109 (188)
Q Consensus        37 ~~~ll~~~~~~~~l~~~la~~~~~---~--~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~--~~k~~~~~~~~~~~~~~~~  109 (188)
                      ...++.+++.+...+..|++++.+   .  +.++|+|++.||+.+|..+|+.|++|+..  ++...          |...
T Consensus        31 ~~~vlis~~~I~~~i~~LA~~I~~~~~~~~~~~vvVgi~~Gg~~~a~~La~~L~~p~~v~~i~vs~----------y~~~  100 (230)
T 1dqn_A           31 KFHLLATFEECKALAADTARRMNEYYKDVAEPVTLVALLTGAYLYASLLTVHLTFPYTLHFVKVSS----------YKGT  100 (230)
T ss_dssp             GCEEEECHHHHHHHHHHHHHHHHHHHTTCSSCEEEEEETTTHHHHHHHHHTTCCSCEEEEEECCEE----------EECS
T ss_pred             cccEecCHHHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCCHHHHHHHHHHhCCCceEEEEEEEE----------eCCC
Confidence            344567887777777777776642   1  46799999999999999999999999743  32211          1000


Q ss_pred             ccceeEEE-ec--CCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChh
Q 029741          110 YGTDRLEM-HV--GAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE  166 (188)
Q Consensus       110 ~~~~~~~l-~~--~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~  166 (188)
                      .... +.+ ..  ....+||+||||||+++||.||.++++.|++     +.++++++++.
T Consensus       101 ~s~~-v~i~~~~l~~~v~Gk~VLIVDDIidTG~Tl~~a~~~L~~-----V~vavLl~k~~  154 (230)
T 1dqn_A          101 RQES-VVFDEEDLKQLKEKREVVLIDEYVDSGHTIFSIQEQIKH-----AKICSCFVKDV  154 (230)
T ss_dssp             SCEE-EECCHHHHHHHHHCSSEEEEEEEESSSHHHHHHHHHSTT-----CEEEEEEESCH
T ss_pred             ccCc-eEEEeccCccCCCCCEEEEEeeEcChHHHHHHHHHHhhc-----CEEEEEEECCc
Confidence            0111 222 11  1125899999999999999999999999988     78889999986

>1i5e_A Uracil phosphoribosyltransferase; salvage pathway; HET: U5P; 3.00A {Bacillus caldolyticus} SCOP: c.61.1.1

Probab=99.34  E-value=1.8e-11  Score=96.13  Aligned_cols=146  Identities=18%  Similarity=0.149  Sum_probs=95.9

Q ss_pred             CCCChhHHHHhhcccccCCCCCCCceEEechhhhcCHHHHHHHHHHHHHHHhc------------------CCCcEEEEe
Q 029741            8 LRGDPRLQGISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRD------------------MGISVVAGI   69 (188)
Q Consensus         8 ~~~~~~~~~~~~~~r~~~~~~~~g~~~~d~~~ll~~~~~~~~l~~~la~~~~~------------------~~~d~Iv~v   69 (188)
                      +-.||+++++-..+|+.-.   ++..|   ..  .-.++.+.++.+....+.-                  .+..+++++
T Consensus         6 ~~~~p~~~~~lt~lRd~~t---~~~~F---r~--~~~~l~~ll~~ea~~~l~~~~~~V~tPl~~~~~~~~~~~~~~vV~I   77 (209)
T 1i5e_A            6 VFDHPLIQHKLTYIRDKNT---GTKEF---RE--LVDEVATLMAFEITRDLPLEEVEIETPVSKARAKVIAGKKLGVIPI   77 (209)
T ss_dssp             ECCCHHHHHHHHHHHCTTC---CHHHH---HH--HHHHHHHHHHHHHGGGCCEEEEEEECSSCEEEEEEECCCCEEEEEB
T ss_pred             EcCCHHHHHHHHHHHCCCC---CHHHH---HH--HHHHHHHHHHHHHHhcCCCcceEEecCCceeeeeEecCCceEEEEE
Confidence            3578999999999988754   11111   11  1122333333333322210                  124588999


Q ss_pred             CCCChhhHHHHHHHh-CCCeEEEeecCCCCCcccchheeeeccce-eEEEecCCCCCCCEEEEEcCcccchHHHHHHHHH
Q 029741           70 EARGFVFGPSIALAI-GAKFVPLRKPNKLPGEVISEAYVLEYGTD-RLEMHVGAIEPGERALVIDDLVATGGTLSAAVRL  147 (188)
Q Consensus        70 ~~gG~~~a~~lA~~l-~~p~~~~~k~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~  147 (188)
                      .++|+.++..+.+.+ ..+...+.+.+...           ..+. ......+...+|++|+||||+++||+|+.++++.
T Consensus        78 lr~G~~~~~~L~~~l~~~~~~~i~~~r~~~-----------t~~~~~~~~~lp~~i~~~~VllvDd~l~TG~T~~~a~~~  146 (209)
T 1i5e_A           78 LRAGIGMVDGILKLIPAAKVGHIGLYRDPQ-----------TLKPVEYYVKLPSDVEERDFIIVDPMLATGGSAVAAIDA  146 (209)
T ss_dssp             TTGGGGGHHHHHHHCTTSEECEEEEECCTT-----------CSSCEEEEEECCTTTTTSEEEEECSEESSSHHHHHHHHH
T ss_pred             ecCChHHHHHHHHhCCCCeEEEEEEEEcCC-----------CCceEEEEEcCCCccCCCEEEEEcCCCcCHHHHHHHHHH
Confidence            999999999999988 44444433322110           0111 1122223346899999999999999999999999


Q ss_pred             HHHcCCeEEEEEEEeeChhhhhccC
Q 029741          148 LERMGAEVVECACVVGLPEGQRRLD  172 (188)
Q Consensus       148 L~~~Ga~~v~v~~l~~~~~~~~~l~  172 (188)
                      |++.|++.+.+++++..+++.+++.
T Consensus       147 L~~~G~~~I~~~~lv~~~~g~~~l~  171 (209)
T 1i5e_A          147 LKKRGAKSIKFMCLIAAPEGVKAVE  171 (209)
T ss_dssp             HHHTTCCCEEEECSEECHHHHHHHH
T ss_pred             HHHcCCCEEEEEEEEECHHHHHHHH
Confidence            9999999999999999988777775

>1o5o_A Uracil phosphoribosyltransferase; TM0721, structural genomic PSI, protein structure initiative, joint center for structu genomics; HET: U5P; 2.30A {Thermotoga maritima} SCOP: c.61.1.1

Probab=99.30  E-value=2.6e-11  Score=95.87  Aligned_cols=142  Identities=15%  Similarity=0.174  Sum_probs=96.3

Q ss_pred             CCCChhHHHHhhcccccCCCCCCCceEEechhhhcCHHHHHHHHHHHHHHHhcC----------------------CCcE
Q 029741            8 LRGDPRLQGISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRDM----------------------GISV   65 (188)
Q Consensus         8 ~~~~~~~~~~~~~~r~~~~~~~~g~~~~d~~~ll~~~~~~~~l~~~la~~~~~~----------------------~~d~   65 (188)
                      +..||+++++-..+|+.-.   ++..|         ....+.++..|+....+.                      +.-+
T Consensus        18 ~~~~p~i~~~lt~lRd~~t---~~~~F---------r~~~~~l~~ll~yEa~~~lp~~~~~v~TP~g~~~g~~~~g~~lv   85 (221)
T 1o5o_A           18 VVDHPLIKHKLTIMRDKNT---GPKEF---------RELLREITLLLAYEATRHLKCEEVEVETPITKTIGYRINDKDIV   85 (221)
T ss_dssp             ECCCHHHHHHHHHHHSTTC---CHHHH---------HHHHHHHHHHHHHHHTTTCCCEEEEEECSSCEEEEEECCSTTEE
T ss_pred             ecCCHHHHHHHHHHHCCCC---CHHHH---------HHHHHHHHHHHHHHHHhcCCceEEEEECCCceEEEEEecCCeEE
Confidence            3578999988888887654   11111         122334444444322111                      2237


Q ss_pred             EEEeCCCChhhHHHHHHHh-CCCeEEEeecCCCCCcccchheeeeccceeE-EEecCCCCCCCEEEEEcCcccchHHHHH
Q 029741           66 VAGIEARGFVFGPSIALAI-GAKFVPLRKPNKLPGEVISEAYVLEYGTDRL-EMHVGAIEPGERALVIDDLVATGGTLSA  143 (188)
Q Consensus        66 Iv~v~~gG~~~a~~lA~~l-~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~  143 (188)
                      +|++.++|+.++..+++.+ +.++.++...+...           .++... ....+...+|++|+||||++.||+|+.+
T Consensus        86 iV~IlrgG~~~~~~l~~~lp~a~vg~I~~~Rd~~-----------t~~~~~~~~~lp~di~gr~VilvDd~laTG~Tl~~  154 (221)
T 1o5o_A           86 VVPILRAGLVMADGILELLPNASVGHIGIYRDPE-----------TLQAVEYYAKLPPLNDDKEVFLLDPMLATGVSSIK  154 (221)
T ss_dssp             EEEEETTHHHHHHHHHHHSTTCEECEEEEEECTT-----------TCCEEEEEEECCCCCTTCEEEEECSEESSSHHHHH
T ss_pred             EEEEecchHHHHHHHHHhCCCCcEEEEEEEEcCC-----------CCceeEEEecCCCccCCCEEEEECCccccHHHHHH
Confidence            8999999999999999998 55554443322110           011111 2222334699999999999999999999


Q ss_pred             HHHHHHHcCCeEEEEEEEeeChhhhhccC
Q 029741          144 AVRLLERMGAEVVECACVVGLPEGQRRLD  172 (188)
Q Consensus       144 ~~~~L~~~Ga~~v~v~~l~~~~~~~~~l~  172 (188)
                      +++.|++.|++.+.+++++..+++.+++.
T Consensus       155 ai~~L~~~G~~~I~~~~lv~~~~g~~~l~  183 (221)
T 1o5o_A          155 AIEILKENGAKKITLVALIAAPEGVEAVE  183 (221)
T ss_dssp             HHHHHHHTTCCEEEEECSEECHHHHHHHH
T ss_pred             HHHHHHHcCCCEEEEEEEEeCHHHHHHHH
Confidence            99999999999999999999998877775

>2ehj_A Uracil phosphoribosyltransferase; structural genomics; 2.80A {Escherichia coli}

Probab=99.20  E-value=3.7e-10  Score=88.46  Aligned_cols=142  Identities=17%  Similarity=0.149  Sum_probs=94.0

Q ss_pred             CCCChhHHHHhhcccccCCCCCCCceEEechhhhcCHHHHHHHHHHHHHHHhcC----------------------CCcE
Q 029741            8 LRGDPRLQGISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRDM----------------------GISV   65 (188)
Q Consensus         8 ~~~~~~~~~~~~~~r~~~~~~~~g~~~~d~~~ll~~~~~~~~l~~~la~~~~~~----------------------~~d~   65 (188)
                      +-.||+++++-..+|+.-.   ++..|         ....+.++..|+....+.                      +.-+
T Consensus         5 v~~hp~i~~~lt~lRd~~t---~~~~F---------r~~~~~l~~ll~~ea~~~l~~~~~~v~TP~~~~~g~~~~g~~l~   72 (208)
T 2ehj_A            5 EVKHPLVKHKLGLMREQDI---STKRF---------RELASEVGSLLTYEATADLETEKVTIEGWNGPVEIDQIKGKKIT   72 (208)
T ss_dssp             ECCCHHHHHHHHHHHCSSC---CHHHH---------HHHHHHHHHHHHHHHTTTCCEEEEEEEETTEEEEEEEECSSCCE
T ss_pred             EcCCHHHHHHHHHHHCCCC---ChHHH---------HHHHHHHHHHHHHHHHhcCCceEEEEECCCccEEEEEecCCceE
Confidence            3578999999999988754   11111         122334444444322110                      2338


Q ss_pred             EEEeCCCChhhHHHHHHHhC-CCeEEEeecCCCCCcccchheeeeccceeE-EEecCCCCCCCEEEEEcCcccchHHHHH
Q 029741           66 VAGIEARGFVFGPSIALAIG-AKFVPLRKPNKLPGEVISEAYVLEYGTDRL-EMHVGAIEPGERALVIDDLVATGGTLSA  143 (188)
Q Consensus        66 Iv~v~~gG~~~a~~lA~~l~-~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~  143 (188)
                      +|++.++|+.++..+.+.+. .++.++.-.+..           +.++... ....+...+|++|+||||++.||+|+.+
T Consensus        73 ~V~ILraG~~~~~~l~~~ip~~~vg~i~~~rd~-----------~t~~~~~~~~~lp~di~~r~VilvDd~laTG~T~~~  141 (208)
T 2ehj_A           73 VVPILRAGLGMMDGVLENVPSARISVVGMYRNE-----------ETLEPVPYFQKLVSNIDERMALIVDPMLATGGSVIA  141 (208)
T ss_dssp             EEEBTTGGGGGHHHHHHHCTTCEECEEEEEECT-----------TTCCEEEEEEECCSCGGGCEEEEEEEEESSCHHHHH
T ss_pred             EEEeecCHHHHHHHHHHhCCcCceeEEEEEEcC-----------CCCceEEEecCCCCccCCCEEEEECCccccHHHHHH
Confidence            99999999999999999875 122122111100           0111122 1122334689999999999999999999


Q ss_pred             HHHHHHHcCCeEEEEEEEeeChhhhhccC
Q 029741          144 AVRLLERMGAEVVECACVVGLPEGQRRLD  172 (188)
Q Consensus       144 ~~~~L~~~Ga~~v~v~~l~~~~~~~~~l~  172 (188)
                      +++.|++.|++.+.+++++..+++.+++.
T Consensus       142 ai~~L~~~G~~~I~~~~lv~~p~g~~~l~  170 (208)
T 2ehj_A          142 TIDLLKKAGCSSIKVLVLVAAPEGIAALE  170 (208)
T ss_dssp             HHHHHHHTTCCEEEEEEEEECHHHHHHHH
T ss_pred             HHHHHHHcCCCEEEEEEEEeCHHHHHHHH
Confidence            99999999999999999999998777774

>2e55_A Uracil phosphoribosyltransferase; structural genomics; 2.15A {Aquifex aeolicus}

Probab=99.19  E-value=4e-10  Score=88.31  Aligned_cols=141  Identities=20%  Similarity=0.208  Sum_probs=94.0

Q ss_pred             CCCChhHHHHhhcccccCCCCCCCceEEechhhhcCHHHHHHHHHHHHHHHhcC----------------------CCcE
Q 029741            8 LRGDPRLQGISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRDM----------------------GISV   65 (188)
Q Consensus         8 ~~~~~~~~~~~~~~r~~~~~~~~g~~~~d~~~ll~~~~~~~~l~~~la~~~~~~----------------------~~d~   65 (188)
                      +-.||+++++-..+|+.-.   ++..|         ....+.++..|+....+.                      +.-+
T Consensus         4 ~~~hp~i~~~lt~lRd~~t---~~~~F---------r~~~~~l~~ll~~ea~~~l~~~~~~v~TP~~~~~~~~~~g~~~~   71 (208)
T 2e55_A            4 ELSHPLIKHKVNTARIQDT---SAEKL---------RKTLKELGFMLVYEALKDILLEEKEVRTWIGNKRFNYLNEEEIV   71 (208)
T ss_dssp             ECCCHHHHHHHHHHHCTTS---CHHHH---------HHHHHHHHHHHHHHHTTTCCCEEEEEEETTEEEEEEECCGGGEE
T ss_pred             ecCCHHHHHHHHHHHCCCC---CHHHH---------HHHHHHHHHHHHHHHHhhCCCceeEEeCCCCceEeeeecCCcEE
Confidence            3578999999999988754   11111         122334444444322111                      1237


Q ss_pred             EEEeCCCChhhHHHHHHHhC-CCeEEEeecCCCCCcccchheeeeccceeE-EEecCCCCCCCEEEEEcCcccchHHHHH
Q 029741           66 VAGIEARGFVFGPSIALAIG-AKFVPLRKPNKLPGEVISEAYVLEYGTDRL-EMHVGAIEPGERALVIDDLVATGGTLSA  143 (188)
Q Consensus        66 Iv~v~~gG~~~a~~lA~~l~-~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~  143 (188)
                      +|++.++|+.++..+.+.+. .++.++.-.+..           +.++..+ ....+ ..+|++|+||||++.||+|+.+
T Consensus        72 ~V~ILraG~~~~~~l~~~lp~~~vg~i~~~rd~-----------~t~~~~~~~~~lp-di~~r~vilvDd~laTG~T~~~  139 (208)
T 2e55_A           72 FVPILRAGLSFLEGALQVVPNAKVGFLGIKRNE-----------ETLESHIYYSRLP-ELKGKIVVILDPMLATGGTLEV  139 (208)
T ss_dssp             EEEEETTTHHHHHHHHHHSTTCEECEEEEEECT-----------TTCCEEEEEEECC-CCBTSEEEEECSEESSSHHHHH
T ss_pred             EEEEecchHHHHHHHHHhCCCCcEEEEEEEEec-----------CCCceEEEecCCC-CCCCCEEEEECCccccHHHHHH
Confidence            89999999999999999875 222222111110           0111122 12224 4699999999999999999999


Q ss_pred             HHHHHHHcCCeEEEEEEEeeChhhhhccC
Q 029741          144 AVRLLERMGAEVVECACVVGLPEGQRRLD  172 (188)
Q Consensus       144 ~~~~L~~~Ga~~v~v~~l~~~~~~~~~l~  172 (188)
                      +++.|++.|++.+.+++++..+++.+++.
T Consensus       140 ai~~L~~~G~~~I~~~~lv~~~~g~~~l~  168 (208)
T 2e55_A          140 ALREILKHSPLKVKSVHAIAAPEGLKRIE  168 (208)
T ss_dssp             HHHHHHTTCBSEEEEEEEEECHHHHHHHH
T ss_pred             HHHHHHHcCCCEEEEEEEEECHHHHHHHH
Confidence            99999999999999999999998777775

>1v9s_A Uracil phosphoribosyltransferase; pyrimidine salvage, oligomerization, structural genomics, RI structural genomics/proteomics initiative; 2.10A {Thermus thermophilus} SCOP: c.61.1.1

Probab=99.15  E-value=3.9e-10  Score=88.38  Aligned_cols=142  Identities=21%  Similarity=0.219  Sum_probs=92.7

Q ss_pred             CCCChhHHHHhhcccccCCCCCCCceEEechhhhcCHHHHHHHHHHHHHHHhcC----------------------CCcE
Q 029741            8 LRGDPRLQGISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRDM----------------------GISV   65 (188)
Q Consensus         8 ~~~~~~~~~~~~~~r~~~~~~~~g~~~~d~~~ll~~~~~~~~l~~~la~~~~~~----------------------~~d~   65 (188)
                      +-.||+++++-..+|+.-.   ++..|         ....+.++..|+....+.                      +.-+
T Consensus         5 v~~~p~i~~~lt~lRd~~t---~~~~F---------r~~~~~l~~ll~~ea~~~l~~~~~~v~TP~g~~~g~~~~g~~l~   72 (208)
T 1v9s_A            5 LVDHPLVQHKLAHLRDKRT---GPKDF---------RELAEEVAMLMAYEAMRDLELEETTVETPIAPARVKVLSGKKLA   72 (208)
T ss_dssp             ECCCHHHHHHHHHHHSTTC---CHHHH---------HHHHHHHHHHHHHHHTTTCCEEEEEEECSSSEEEEEEECSSCCE
T ss_pred             EcCCHHHHHHHHHHHCCCC---CHHHH---------HHHHHHHHHHHHHHHHccCCCeEEEEECCCceEEEEEecCCceE
Confidence            3578999999999988754   11111         122334444444322110                      2338


Q ss_pred             EEEeCCCChhhHHHHHHHhC-CCeEEEeecCCCCCcccchheeeeccceeE-EEecCCCCCCCEEEEEcCcccchHHHHH
Q 029741           66 VAGIEARGFVFGPSIALAIG-AKFVPLRKPNKLPGEVISEAYVLEYGTDRL-EMHVGAIEPGERALVIDDLVATGGTLSA  143 (188)
Q Consensus        66 Iv~v~~gG~~~a~~lA~~l~-~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~  143 (188)
                      +|++.++|+.++..+.+.+. .++.++.-.+. .          +.++... ....+...+|++|+||||++.||+|+.+
T Consensus        73 ~V~ILraG~~~~~~l~~~ip~~~vg~I~~~rd-~----------~t~~~~~~~~~lp~di~~r~vilvDd~laTG~T~~~  141 (208)
T 1v9s_A           73 LVAILRAGLVMVEGILKLVPHARVGHIGLYRD-P----------ESLNPVQYYIKLPPDIAERRAFLLDPMLATGGSASL  141 (208)
T ss_dssp             EEEETTTHHHHHHHHHTTCTTCEEEEEEEC--------------------CEEEECCSCGGGSCEEEECSEESSSHHHHH
T ss_pred             EEEeccchHHHHHHHHHhCCCCeeeEEEEEEc-C----------CCCCceEEeccCCCccCCCEEEEECCccccHHHHHH
Confidence            99999999999999998775 22222221111 0          0011111 1122334589999999999999999999


Q ss_pred             HHHHHHHcCCeEEEEEEEeeChhhhhccC
Q 029741          144 AVRLLERMGAEVVECACVVGLPEGQRRLD  172 (188)
Q Consensus       144 ~~~~L~~~Ga~~v~v~~l~~~~~~~~~l~  172 (188)
                      +++.|++.|++.+.+++++..+++.+++.
T Consensus       142 ai~~L~~~G~~~I~~~~lv~~~~g~~~l~  170 (208)
T 1v9s_A          142 ALSLLKERGATGVKLMAILAAPEGLERIA  170 (208)
T ss_dssp             HHHHHHHTTCCSCEEEEEEECHHHHHHHH
T ss_pred             HHHHHHHcCCCEEEEEEEEeCHHHHHHHH
Confidence            99999999999999999999998777775

>1bd3_D Uprtase, uracil phosphoribosyltransferase; glycosyltransferase; 1.93A {Toxoplasma gondii} SCOP: c.61.1.1 PDB: 1bd4_D 1jlr_A* 1jls_B* 1upf_D 1upu_D*

Probab=98.95  E-value=3e-09  Score=85.07  Aligned_cols=98  Identities=16%  Similarity=0.209  Sum_probs=71.6

Q ss_pred             cEEEEeCCCChhhHHHHHHHhC-CCeEEEeecCCCCCcccchheeeeccceeE-EEecCCCCCCCEEEEEcCcccchHHH
Q 029741           64 SVVAGIEARGFVFGPSIALAIG-AKFVPLRKPNKLPGEVISEAYVLEYGTDRL-EMHVGAIEPGERALVIDDLVATGGTL  141 (188)
Q Consensus        64 d~Iv~v~~gG~~~a~~lA~~l~-~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~Gk~VLIVDDvi~TG~Tl  141 (188)
                      -++|++.++|+.++..+.+.+. .++-++.-.+..           +.++..+ +...+...+|++|+||||++.||+|+
T Consensus       104 l~~V~ILRaG~~m~~~l~~~ip~a~vg~I~~~Rd~-----------~t~~~~~~~~~lp~di~~r~VilvDdmlaTG~T~  172 (243)
T 1bd3_D          104 ICGVSIVRAGESMESGLRAVCRGVRIGKILIQRDE-----------TTAEPKLIYEKLPADIRERWVMLLDPMCATAGSV  172 (243)
T ss_dssp             EEEEEEETTTHHHHHHHHHHSTTCCEEEEEEEECS-----------SSCCEEEEEEECCTTGGGSEEEEECSEESSCHHH
T ss_pred             EEEEEEEcchHHHHHHHHHhCCcCeeeeEEEEEcC-----------CCCCeEEEeccCCcccCCCEEEEECCccccHHHH
Confidence            3688999999999999999874 233222111100           0011122 12223345899999999999999999


Q ss_pred             HHHHHHHHHcCC--eEEEEEEEeeChhhhhccC
Q 029741          142 SAAVRLLERMGA--EVVECACVVGLPEGQRRLD  172 (188)
Q Consensus       142 ~~~~~~L~~~Ga--~~v~v~~l~~~~~~~~~l~  172 (188)
                      .++++.|++.|+  +.+.+++++..+++.+++.
T Consensus       173 ~~ai~~L~~~G~~p~~I~~~~lvaap~g~~~l~  205 (243)
T 1bd3_D          173 CKAIEVLLRLGVKEERIIFVNILAAPQGIERVF  205 (243)
T ss_dssp             HHHHHHHHHHTCCGGGEEEEEEEECHHHHHHHH
T ss_pred             HHHHHHHHHcCCCcceEEEEEEEeCHHHHHHHH
Confidence            999999999999  9999999999998777775

>3dmp_A Uracil phosphoribosyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.60A {Burkholderia pseudomallei} SCOP: c.61.1.1

Probab=98.81  E-value=9.9e-09  Score=80.82  Aligned_cols=96  Identities=18%  Similarity=0.197  Sum_probs=69.9

Q ss_pred             EEEEeCCCChhhHHHHHHHhC-CCeEEEeecCCCCCcccchheeeeccceeEEEecCCCCCCCEEEEEcCcccchHHHHH
Q 029741           65 VVAGIEARGFVFGPSIALAIG-AKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSA  143 (188)
Q Consensus        65 ~Iv~v~~gG~~~a~~lA~~l~-~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~  143 (188)
                      ++|++.++|..++..+.+.+. .++-.+--.+.  ...         +....+...+ ..+|++|+|+||++.||+|+.+
T Consensus        80 ~~V~IlRaG~~m~~~l~~~ip~a~vg~i~~~Rd--~~t---------~p~~~~~~lP-~i~~~~VilvD~~laTG~T~~~  147 (217)
T 3dmp_A           80 AIVPVLRAGVGMSDGLLELIPSARVGHIGVYRA--DDH---------RPVEYLVRLP-DLEDRIFILCDPMVATGYSAAH  147 (217)
T ss_dssp             EEEEEETTTHHHHHHHHHHCTTSEECEEECSCC--CSS---------SCCCSEEECC-CCTTCEEEEECSEESSSHHHHH
T ss_pred             EEEEecccchHHHHHHHHhCcCCceeEEEEEEC--CCC---------CcEEEeecCC-CCCCCEEEEEcCcccccHHHHH
Confidence            788899999999999999874 34333221111  000         0000111124 4689999999999999999999


Q ss_pred             HHHHHHHcCC--eEEEEEEEeeChhhhhccC
Q 029741          144 AVRLLERMGA--EVVECACVVGLPEGQRRLD  172 (188)
Q Consensus       144 ~~~~L~~~Ga--~~v~v~~l~~~~~~~~~l~  172 (188)
                      +++.|++.|+  +.+.+++++..+++.+++.
T Consensus       148 ai~~L~~~G~pe~~I~~~~~vaa~egl~~l~  178 (217)
T 3dmp_A          148 AIDVLKRRGVPGERLMFLALVAAPEGVQVFQ  178 (217)
T ss_dssp             HHHHHHTTTCCGGGEEEECSEECHHHHHHHH
T ss_pred             HHHHHHHcCCCcCeEEEEEEEeCHHHHHHHH
Confidence            9999999999  8899999999888766664

>1xtt_A Probable uracil phosphoribosyltransferase; tetramer, type 1 phosphoribosyltransferase, UMP complex; HET: U5P; 1.80A {Sulfolobus solfataricus} SCOP: c.61.1.1 PDB: 1vst_A* 1xtu_A* 1xtv_A* 3g6w_A*

Probab=98.58  E-value=2.1e-07  Score=73.22  Aligned_cols=100  Identities=11%  Similarity=0.072  Sum_probs=69.2

Q ss_pred             cEEEEeCCCChhhHHHHHHHhC-CCeEEE--eecCCCCCcccchheeeec-cceeE-EEecCCCCCCC--EEEEEcCccc
Q 029741           64 SVVAGIEARGFVFGPSIALAIG-AKFVPL--RKPNKLPGEVISEAYVLEY-GTDRL-EMHVGAIEPGE--RALVIDDLVA  136 (188)
Q Consensus        64 d~Iv~v~~gG~~~a~~lA~~l~-~p~~~~--~k~~~~~~~~~~~~~~~~~-~~~~~-~l~~~~~~~Gk--~VLIVDDvi~  136 (188)
                      -++|++.++|..++..+...+. .+.-.+  .+.......      . +. .+... +...+ ..+++  +|+|+||++.
T Consensus        73 i~iV~IlRaG~~m~~gl~~~lp~a~vg~I~~~Rd~~t~~~------~-~~~~~p~~~y~klP-~i~~~~~~VilvDp~la  144 (216)
T 1xtt_A           73 IVIINILRAAVPLVEGLLKAFPKARQGVIGASRVEVDGKE------V-PKDMDVYIYYKKIP-DIRAKVDNVIIADPMIA  144 (216)
T ss_dssp             EEEEEEETTTHHHHHHHHHHCTTCEEEEEEEEECCCCCSS------C-CSCCCEEEEEEECC-CCCTTTCEEEEECSEES
T ss_pred             EEEEeecCCcHHHHHHHHHHcccCccceEEEEECCCcccc------c-ccccCceEeeccCC-CccCCcceEEEEcCCcc
Confidence            3788999999999999998874 333222  111110000      0 00 01111 12224 45888  9999999999


Q ss_pred             chHHHHHHHHHHHHcCC-eEEEEEEEeeChhhhhccC
Q 029741          137 TGGTLSAAVRLLERMGA-EVVECACVVGLPEGQRRLD  172 (188)
Q Consensus       137 TG~Tl~~~~~~L~~~Ga-~~v~v~~l~~~~~~~~~l~  172 (188)
                      ||+|+.++++.|++ |+ +.+.+++++..+++.+++.
T Consensus       145 TG~T~~~ai~~L~~-G~p~~I~~~~~vaa~~gl~~l~  180 (216)
T 1xtt_A          145 TASTMLKVLEEVVK-ANPKRIYIVSIISSEYGVNKIL  180 (216)
T ss_dssp             SSHHHHHHHHHHGG-GCCSEEEEECSEEEHHHHHHHH
T ss_pred             chHHHHHHHHHHHh-CCCCeEEEEEEecCHHHHHHHH
Confidence            99999999999999 99 9999999999888777764

>3dah_A Ribose-phosphate pyrophosphokinase; pyrophosphoki seattle structural genomics center for infectious disease, magnesium, metal binding; HET: AMP; 2.30A {Burkholderia pseudomallei}

Probab=88.21  E-value=5.8  Score=32.40  Aligned_cols=80  Identities=15%  Similarity=0.121  Sum_probs=50.6

Q ss_pred             eCCCChhhHHHHHHHhCCCeEEEeecCCCCCcccchheeeeccceeEEEecCCCCCCCEEEEEcCcccchH----HHHHH
Q 029741           69 IEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGG----TLSAA  144 (188)
Q Consensus        69 v~~gG~~~a~~lA~~l~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~----Tl~~~  144 (188)
                      ...+.-.+|..+|..||+|+..+.-.+..            .|+-.+.+  ....+|++|.||-.....-.    -+.-+
T Consensus        12 ~g~~~~~La~~ia~~lg~~l~~~~~~~F~------------dGE~~v~i--~esvrg~dV~iiqs~~~p~nd~lmeLl~~   77 (319)
T 3dah_A           12 TGNANPALAQEVVKILGIPLGKAMVSRFS------------DGEIQVEI--QENVRGKDVFVLQSTCAPTNDNLMELMIM   77 (319)
T ss_dssp             ECSSCHHHHHHHHHHHTSCCCCEEEEECT------------TSCEEEEE--CSCCBTCEEEEECCCCSSHHHHHHHHHHH
T ss_pred             ECCCCHHHHHHHHHHhCCceeeeEEEECC------------CCCEEEEE--CCCcCCCeEEEEccCCCCCcHHHHHHHHH
Confidence            34455689999999999987544322211            22222333  33468999999976543311    15566


Q ss_pred             HHHHHHcCCeEEEEEEEe
Q 029741          145 VRLLERMGAEVVECACVV  162 (188)
Q Consensus       145 ~~~L~~~Ga~~v~v~~l~  162 (188)
                      ++.++.++|+.+.++...
T Consensus        78 idA~k~asA~rIt~ViPY   95 (319)
T 3dah_A           78 VDALKRASAGRITAAIPY   95 (319)
T ss_dssp             HHHHHHTTBSEEEEEESS
T ss_pred             HHHHHHcCCcEEEEEccC
Confidence            778889999987765443

>3s5j_B Ribose-phosphate pyrophosphokinase 1; nucleotide synthesis, transferase; 2.02A {Homo sapiens} PDB: 2hcr_A* 3efh_A 2h06_A 2h07_A 2h08_A

Probab=82.99  E-value=17  Score=29.69  Aligned_cols=78  Identities=13%  Similarity=0.091  Sum_probs=48.0

Q ss_pred             CCChhhHHHHHHHhCCCeEEEeecCCCCCcccchheeeeccceeEEEecCCCCCCCEEEEEcCcccc-hH---HHHHHHH
Q 029741           71 ARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVAT-GG---TLSAAVR  146 (188)
Q Consensus        71 ~gG~~~a~~lA~~l~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gk~VLIVDDvi~T-G~---Tl~~~~~  146 (188)
                      .+.-.+|..+|..||+|+..+.-.+-.            .|+-.+.+  ....+|+.|.||-..-.. -.   -+.-+++
T Consensus        10 ~~~~~La~~ia~~lg~~l~~~~~~~F~------------dGE~~v~i--~esvrg~dV~iiqs~~~p~nd~lmeLl~~id   75 (326)
T 3s5j_B           10 SSHQDLSQKIADRLGLELGKVVTKKFS------------NQETCVEI--GESVRGEDVYIVQSGCGEINDNLMELLIMIN   75 (326)
T ss_dssp             SSCCHHHHHHHHHTTCCCCCEEEEECT------------TSCEEEEE--CSCCTTCEEEEECCCCSCHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHhCCceeeeEEeECC------------CCCEEEEE--CCCcCCCcEEEEecCCCCccHHHHHHHHHHH
Confidence            444579999999999987544322211            22222333  344699999999764332 11   2335567


Q ss_pred             HHHHcCCeEEEEEEEe
Q 029741          147 LLERMGAEVVECACVV  162 (188)
Q Consensus       147 ~L~~~Ga~~v~v~~l~  162 (188)
                      .++.++|+.+.++...
T Consensus        76 A~k~asA~rIt~ViPY   91 (326)
T 3s5j_B           76 ACKIASASRVTAVIPC   91 (326)
T ss_dssp             HHHHTTCSEEEEEESS
T ss_pred             HHHhcCCcEEEEeccC
Confidence            7788999988765443

>1u9y_A RPPK;, ribose-phosphate pyrophosphokinase; PRPP synthase, transferase; 2.65A {Methanocaldococcus jannaschii} SCOP: c.61.1.2 c.61.1.2 PDB: 1u9z_A*

Probab=81.57  E-value=18  Score=28.72  Aligned_cols=77  Identities=8%  Similarity=0.017  Sum_probs=48.5

Q ss_pred             CChhhHHHHHHHhCCCeEEEeecCCCCCcccchheeeeccceeEEEecCCCCCCCEEEEEcCcccc-hH--HHHHHHHHH
Q 029741           72 RGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVAT-GG--TLSAAVRLL  148 (188)
Q Consensus        72 gG~~~a~~lA~~l~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gk~VLIVDDvi~T-G~--Tl~~~~~~L  148 (188)
                      +.-.+|..+|..||+|+..+...+..+            |+-.+.+  ....+|++|.||-..-.. -.  -+.-+++.+
T Consensus         8 ~~~~la~~ia~~l~~~l~~~~~~~F~d------------GE~~v~i--~~~vrg~dv~iiqs~~~pn~~lmell~~~~a~   73 (284)
T 1u9y_A            8 QSQNLAFKVAKLLNTKLTRVEYKRFPD------------NEIYVRI--VDEINDDEAVIINTQKNQNDAIVETILLCDAL   73 (284)
T ss_dssp             TCHHHHHHHHHHTTCCEECEEEEECTT------------CCEEEEE--CSCCCSSEEEEECCCSSHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHhCCeeeeeEEEECCC------------CCEEEEe--CCCCCCCEEEEEeCCCCCcHHHHHHHHHHHHH
Confidence            445799999999999986543332212            2222333  334689999999876542 11  244556788


Q ss_pred             HHcCCeEEEEEEEe
Q 029741          149 ERMGAEVVECACVV  162 (188)
Q Consensus       149 ~~~Ga~~v~v~~l~  162 (188)
                      +.++|+.+.++...
T Consensus        74 ~~~~a~~i~~v~Py   87 (284)
T 1u9y_A           74 RDEGVKKITLVAPY   87 (284)
T ss_dssp             HTTTCCEEEEECSS
T ss_pred             HHcCCceEEEEecc
Confidence            88999987655433

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	188
d1zn7a1	178	c.61.1.1 (A:3-180) Adenine PRTase {Human (Homo sap	3e-49
d1g2qa_	178	c.61.1.1 (A:) Adenine PRTase {Baker's yeast (Sacch	2e-43
d1l1qa_	181	c.61.1.1 (A:) Adenine PRTase {Giardia lamblia [Tax	8e-42
d1qb7a_	236	c.61.1.1 (A:) Adenine PRTase {Leishmania donovani	1e-39
d1o57a2	202	c.61.1.1 (A:75-276) Pur operon repressor (PurR), C	8e-36
d1vcha1	174	c.61.1.1 (A:2-175) Putative phosphoribosyltransfer	3e-33
d1y0ba1	191	c.61.1.1 (A:1-191) Xanthine phosphoribosyltransfer	7e-30
d2aeea1	208	c.61.1.1 (A:1-208) Orotate PRTase {Streptococcus p	2e-06
d1wd5a_	208	c.61.1.1 (A:) Putative phosphoribosyltransferase T	2e-05
d1nula_	150	c.61.1.1 (A:) Xanthine-guanine PRTase (XPRTase) {E	1e-04
d1xtta1	215	c.61.1.1 (A:2-216) Uracil PRTase, Upp {Sulfolobus	0.002
d1v9sa1	208	c.61.1.1 (A:1-208) Uracil PRTase, Upp {Thermus the	0.004

>d1zn7a1 c.61.1.1 (A:3-180) Adenine PRTase {Human (Homo sapiens) [TaxId: 9606]} Length = 178

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Adenine PRTase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  155 bits (393), Expect = 3e-49
 Identities = 73/176 (41%), Positives = 111/176 (63%), Gaps = 5/176 (2%)

Query: 11  DPRLQGISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRDM---GISVVA 67
           D  LQ + + IR  PDFP PG++F+DI+ +L D  +F+  + +     +      I  +A
Sbjct: 1   DSELQLVEQRIRSFPDFPTPGVVFRDISPVLKDPASFRAAIGLLARHLKATHGGRIDYIA 60

Query: 68  GIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGER 127
           G+++RGF+FGPS+A  +G   V +RK  KLPG  +  +Y LEYG   LE+   A+EPG+R
Sbjct: 61  GLDSRGFLFGPSLAQELGLGCVLIRKRGKLPGPTLWASYSLEYGKAELEIQKDALEPGQR 120

Query: 128 ALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLDGKPLYILVE 181
            +V+DDL+ATGGT++AA  LL R+ AEV+EC  +V L    G+ +L   P + L++
Sbjct: 121 VVVVDDLLATGGTMNAACELLGRLQAEVLECVSLVELTSLKGREKLAPVPFFSLLQ 176

>d1g2qa_ c.61.1.1 (A:) Adenine PRTase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 178

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Adenine PRTase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  141 bits (355), Expect = 2e-43
 Identities = 62/173 (35%), Positives = 103/173 (59%), Gaps = 7/173 (4%)

Query: 14  LQGISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVD----RYRDMGISVVAGI 69
            Q +  A+   P+FP  GI+F+D   +  +   F+  +D F       + ++ I  + G+
Sbjct: 7   AQELKLALHQYPNFPSEGILFEDFLPIFRNPGLFQKLIDAFKLHLEEAFPEVKIDYIVGL 66

Query: 70  EARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERAL 129
           E+RGF+FGP++ALA+G  FVP+RK  KLPGE     Y  EYG+D  E+   AI  G   +
Sbjct: 67  ESRGFLFGPTLALALGVGFVPVRKAGKLPGECFKATYEKEYGSDLFEIQKNAIPAGSNVI 126

Query: 130 VIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLDGKPLYILV 180
           ++DD++ATGG+ +AA  L+E++ A ++E   V+ L    G+ +L+  P++ L+
Sbjct: 127 IVDDIIATGGSAAAAGELVEQLEANLLEYNFVMELDFLKGRSKLNA-PVFTLL 178

>d1l1qa_ c.61.1.1 (A:) Adenine PRTase {Giardia lamblia [TaxId: 5741]} Length = 181

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Adenine PRTase
species: Giardia lamblia [TaxId: 5741]

 Score =  136 bits (344), Expect = 8e-42
 Identities = 55/172 (31%), Positives = 89/172 (51%), Gaps = 7/172 (4%)

Query: 17  ISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVF 76
               I+ +PDFP  GI F+D++ +L    A           Y+D+ I+ V GIE+RGF+ 
Sbjct: 7   AHALIKTIPDFPTKGIAFKDLSDILSTPAALDAVRKEVTAHYKDVPITKVVGIESRGFIL 66

Query: 77  GPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDR-LEMHVGAIEPGERALVIDDLV 135
           G  +A ++G  FV LRK  KLPG+V    + +EY     +E+    + P +  L+ DD++
Sbjct: 67  GGIVANSLGVGFVALRKAGKLPGDVCKCTFDMEYQKGVTIEVQKRQLGPHDVVLLHDDVL 126

Query: 136 ATGGTLSAAVRLLERMGA--EVVECACVVGLPE--GQRRLD--GKPLYILVE 181
           ATGGTL AA+ L E  G   E +    +  +    G+ ++      L+ ++ 
Sbjct: 127 ATGGTLLAAIELCETAGVKPENIYINVLYEIEALKGREKVGQKCTRLFSVIR 178

>d1qb7a_ c.61.1.1 (A:) Adenine PRTase {Leishmania donovani [TaxId: 5661]} Length = 236

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Adenine PRTase
species: Leishmania donovani [TaxId: 5661]

 Score =  132 bits (334), Expect = 1e-39
 Identities = 55/165 (33%), Positives = 88/165 (53%), Gaps = 10/165 (6%)

Query: 17  ISKAIR-VVPDF-PIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISV--VAGIEAR 72
           + K+ R   P F P     F D++++    +  K   D  V RYR M  +   + G +AR
Sbjct: 22  LKKSYRWYSPVFSPRNVPRFADVSSITESPETLKAIRDFLVQRYRAMSPAPTHILGFDAR 81

Query: 73  GFVFGPSIALAIGAKFVPLRKPNKLPGEVI-SEAYVLEY---GTDRLEMHVGAIEPGERA 128
           GF+FGP IA+ +   FV +RK +K  G +I SE Y  EY     + + +  G+I  G R 
Sbjct: 82  GFLFGPMIAVELEIPFVLMRKADKNAGLLIRSEPYEKEYKEAAPEVMTIRYGSIGKGSRV 141

Query: 129 LVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRL 171
           ++IDD++ATGGT  + ++L+E   A VVE   ++ +P      ++
Sbjct: 142 VLIDDVLATGGTALSGLQLVEASDAVVVEMVSILSIPFLKAAEKI 186

>d1o57a2 c.61.1.1 (A:75-276) Pur operon repressor (PurR), C-terminal domain {Bacillus subtilis [TaxId: 1423]} Length = 202

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Pur operon repressor (PurR), C-terminal domain
species: Bacillus subtilis [TaxId: 1423]

 Score =  122 bits (306), Expect = 8e-36
 Identities = 37/162 (22%), Positives = 65/162 (40%), Gaps = 6/162 (3%)

Query: 25  PDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAI 84
           P+  +PG  +  +T +L           +F   + +  I VV  +  +G     + A  +
Sbjct: 20  PERILPGG-YVYLTDILGKPSVLSKVGKLFASVFAEREIDVVMTVATKGIPLAYAAASYL 78

Query: 85  GAKFVPLRKPNKLP-GEVISEAYVLEYG--TDRLEMHVGAIEPGERALVIDDLVATGGTL 141
               V +RK NK+  G  +S  YV         + +   +++ G   L+IDD +  GGT+
Sbjct: 79  NVPVVIVRKDNKVTEGSTVSINYVSGSSNRIQTMSLAKRSMKTGSNVLIIDDFMKAGGTI 138

Query: 142 SAAVRLLERMGAEVVECACVVGLPEGQRRL--DGKPLYILVE 181
           +  + LL+   A V     +V       RL  +   L  L  
Sbjct: 139 NGMINLLDEFNANVAGIGVLVEAEGVDERLVDEYMSLLTLST 180

>d1vcha1 c.61.1.1 (A:2-175) Putative phosphoribosyltransferase TTHA1613 {Thermus thermophilus [TaxId: 274]} Length = 174

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Putative phosphoribosyltransferase TTHA1613
species: Thermus thermophilus [TaxId: 274]

 Score =  114 bits (287), Expect = 3e-33
 Identities = 31/165 (18%), Positives = 57/165 (34%), Gaps = 8/165 (4%)

Query: 17  ISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVF 76
           +    R VP           +   L D +  +   +            ++   E      
Sbjct: 7   VGGVTRHVPLIEPLPGRRIPLVEFLGDPEFTRAAAEALRPLV-PKEAEILFTTETSPIPL 65

Query: 77  GPSIALAIGAKFVPLRKPNKLPGE--VISEAYVLEYGTDR---LEMHVGAIEPGERALVI 131
              +A A+G  +V  R+  +   E  +I E   L  G      L+         +R +++
Sbjct: 66  THVLAEALGLPYVVARRRRRPYMEDPIIQEVQTLTLGVGEVLWLDRRFAEKLLNQRVVLV 125

Query: 132 DDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQRRLDGKPL 176
            D+VA+G T+ A  +++ R G  VV    V    +G   L    +
Sbjct: 126 SDVVASGETMRAMEKMVLRAGGHVVARLAVFR--QGTPGLAVDTV 168

>d1y0ba1 c.61.1.1 (A:1-191) Xanthine phosphoribosyltransferase {Bacillus subtilis [TaxId: 1423]} Length = 191

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Xanthine phosphoribosyltransferase
species: Bacillus subtilis [TaxId: 1423]

 Score =  106 bits (266), Expect = 7e-30
 Identities = 31/176 (17%), Positives = 60/176 (34%), Gaps = 9/176 (5%)

Query: 14  LQGISKAIRVVPDFPIPGIMF-QDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEAR 72
           ++ + + I          ++         +D    +   D F  R+   GI+ +  IE+ 
Sbjct: 1   MEALKRKIEEEGVVLSDQVLKVDSFLNHQIDPLLMQRIGDEFASRFAKDGITKIVTIESS 60

Query: 73  GFVFGPSIALAIGAKFVPLRKPNKLPGE----VISEAYVLEYGTDRLEMHVGAIEPGERA 128
           G        L +G   V  RK   L         S     +    ++ +    +   +  
Sbjct: 61  GIAPAVMTGLKLGVPVVFARKHKSLTLTDNLLTASVYSFTKQTESQIAVSGTHLSDQDHV 120

Query: 129 LVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLD--GKPLYILV 180
           L+IDD +A G      V ++++ GA +     V+      G+  L   G  +  L 
Sbjct: 121 LIIDDFLANGQAAHGLVSIVKQAGASIAGIGIVIEKSFQPGRDELVKLGYRVESLA 176

>d2aeea1 c.61.1.1 (A:1-208) Orotate PRTase {Streptococcus pyogenes [TaxId: 1314]} Length = 208

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Orotate PRTase
species: Streptococcus pyogenes [TaxId: 1314]

 Score = 44.0 bits (103), Expect = 2e-06
 Identities = 33/153 (21%), Positives = 56/153 (36%), Gaps = 20/153 (13%)

Query: 34  FQDITTLLLDHKAFKDTVDIFVDRYRDMG--ISVVAGIEARGFVFGPSIALAIGAKFVPL 91
           + D    L   K      + FV+  +     + V+AG    G   G  IA  +   F  +
Sbjct: 36  YTDNRVTLSYPKTRDLIENGFVETIKAHFPEVEVIAGTATAGIPHGAIIADKMTLPFAYI 95

Query: 92  RKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERM 151
           R   K                       G +  G++ ++I+DL++TGG++  A     R 
Sbjct: 96  RSKPK--------------DHGAGNQIEGRVLKGQKMVIIEDLISTGGSVLDAAAAASRE 141

Query: 152 GAEVVECACVV--GLPEGQRRLD--GKPLYILV 180
           GA+V+    +    LP+  +     G  L  L 
Sbjct: 142 GADVLGVVAIFTYELPKASQNFKEAGIKLITLS 174

>d1wd5a_ c.61.1.1 (A:) Putative phosphoribosyltransferase TT1426 (TTHA1462) {Thermus thermophilus [TaxId: 274]} Length = 208

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Putative phosphoribosyltransferase TT1426 (TTHA1462)
species: Thermus thermophilus [TaxId: 274]

 Score = 41.3 bits (96), Expect = 2e-05
 Identities = 17/57 (29%), Positives = 29/57 (50%)

Query: 125 GERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQRRLDGKPLYILVE 181
           G   +++DD VATG ++ AA+ ++ + G   V  A  V  PE   RL  +   + + 
Sbjct: 120 GRDVVLVDDGVATGASMEAALSVVFQEGPRRVVVAVPVASPEAVERLKARAEVVALS 176

>d1nula_ c.61.1.1 (A:) Xanthine-guanine PRTase (XPRTase) {Escherichia coli [TaxId: 562]} Length = 150

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Xanthine-guanine PRTase (XPRTase)
species: Escherichia coli [TaxId: 562]

 Score = 38.5 bits (89), Expect = 1e-04
 Identities = 21/99 (21%), Positives = 35/99 (35%), Gaps = 10/99 (10%)

Query: 58  YRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEM 117
                   +  +   G V G  +A  +G + V          + +  +         L++
Sbjct: 22  MPSEQWKGIIAVSRGGLVPGALLARELGIRHV----------DTVCISSYDHDNQRELKV 71

Query: 118 HVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVV 156
              A   GE  +VIDDLV TGGT  A   +  +     +
Sbjct: 72  LKRAEGDGEGFIVIDDLVDTGGTAVAIREMYPKAHFVTI 110

>d1xtta1 c.61.1.1 (A:2-216) Uracil PRTase, Upp {Sulfolobus solfataricus [TaxId: 2287]} Length = 215

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Uracil PRTase, Upp
species: Sulfolobus solfataricus [TaxId: 2287]

 Score = 35.4 bits (81), Expect = 0.002
 Identities = 5/50 (10%), Positives = 20/50 (40%)

Query: 122 IEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQRRL 171
               +  ++ D ++AT  T+   +  + +   + +    ++    G  ++
Sbjct: 129 RAKVDNVIIADPMIATASTMLKVLEEVVKANPKRIYIVSIISSEYGVNKI 178

>d1v9sa1 c.61.1.1 (A:1-208) Uracil PRTase, Upp {Thermus thermophilus [TaxId: 274]} Length = 208

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Uracil PRTase, Upp
species: Thermus thermophilus [TaxId: 274]

 Score = 34.2 bits (78), Expect = 0.004
 Identities = 17/44 (38%), Positives = 28/44 (63%)

Query: 128 ALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQRRL 171
           A ++D ++ATGG+ S A+ LL+  GA  V+   ++  PEG  R+
Sbjct: 126 AFLLDPMLATGGSASLALSLLKERGATGVKLMAILAAPEGLERI 169

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	188
d1zn7a1	178	Adenine PRTase {Human (Homo sapiens) [TaxId: 9606]	100.0
d1g2qa_	178	Adenine PRTase {Baker's yeast (Saccharomyces cerev	100.0
d1l1qa_	181	Adenine PRTase {Giardia lamblia [TaxId: 5741]}	100.0
d1qb7a_	236	Adenine PRTase {Leishmania donovani [TaxId: 5661]}	99.98
d1o57a2	202	Pur operon repressor (PurR), C-terminal domain {Ba	99.96
d1y0ba1	191	Xanthine phosphoribosyltransferase {Bacillus subti	99.96
d2aeea1	208	Orotate PRTase {Streptococcus pyogenes [TaxId: 131	99.93
d1vcha1	174	Putative phosphoribosyltransferase TTHA1613 {Therm	99.92
d1lh0a_	213	Orotate PRTase {Salmonella typhimurium [TaxId: 903	99.86
d1vdma1	153	Pprobable purine phosphoribosyltransferase PH0095	99.84
d1hgxa_	173	Hypoxanthine-guanine-xanthine PRTase {Tritrichomon	99.7
d1u9ya2	129	Phosphoribosylpyrophosphate synthetase {Methanocal	99.68
d1yfza1	178	Xanthine-guanine PRTase (XPRTase) {Thermoanaerobac	99.68
d1dkua2	149	Phosphoribosylpyrophosphate synthetase {Bacillus s	99.65
d1nula_	150	Xanthine-guanine PRTase (XPRTase) {Escherichia col	99.63
d1tc1a_	184	Hypoxanthine PRTase {Trypanosoma cruzi [TaxId: 569	99.63
d1wd5a_	208	Putative phosphoribosyltransferase TT1426 (TTHA146	99.62
d1j7ja_	172	Hypoxanthine PRTase {Salmonella typhimurium [TaxId	99.62
d2c4ka2	184	PRPP synthetase-associated protein 1 {Human (Homo	99.61
d1pzma_	183	Hypoxanthine-guanine-xanthine PRTase {Leishmania t	99.6
d1z7ga1	214	Hypoxanthine-guanine PRTase (HGPRTase) {Human (Hom	99.56
d1ufra_	178	Pyrimidine operon regulator PyrR {Thermus thermoph	99.52
d1cjba_	228	Hypoxanthine-guanine PRTase (HGPRTase) {Plasmodium	99.52
d1fsga_	233	Hypoxanthine-guanine-xanthine PRTase {Toxoplasma g	99.5
d1a3ca_	178	Pyrimidine operon regulator PyrR {Bacillus subtili	99.46
d1gph11	231	Glutamine PRPP amidotransferase, C-terminal domain	99.45
d1ecfa1	243	Glutamine PRPP amidotransferase, C-terminal domain	99.43
d1w30a_	182	Pyrimidine operon regulator PyrR {Mycobacterium tu	99.42
d1dqna_	230	Guanine PRTase {Giardia lamblia [TaxId: 5741]}	99.37
d1o5oa_	210	Uracil PRTase, Upp {Thermotoga maritima [TaxId: 23	98.49
d1i5ea_	208	Uracil PRTase, Upp {Bacillus caldolyticus [TaxId:	98.48
d1bd3a_	224	Uracil PRTase, Upp {Toxoplasma gondii [TaxId: 5811	98.15
d1v9sa1	208	Uracil PRTase, Upp {Thermus thermophilus [TaxId: 2	98.11
d1xtta1	215	Uracil PRTase, Upp {Sulfolobus solfataricus [TaxId	97.95
d1u9ya1	155	Phosphoribosylpyrophosphate synthetase {Methanocal	94.12
d1dkua1	159	Phosphoribosylpyrophosphate synthetase {Bacillus s	93.98
d2c4ka1	160	PRPP synthetase-associated protein 1 {Human (Homo	93.75
d1u0sy_	118	CheY protein {Thermotoga maritima [TaxId: 2336]}	86.17
d1dcfa_	134	Receiver domain of the ethylene receptor {Thale cr	82.51

>d1zn7a1 c.61.1.1 (A:3-180) Adenine PRTase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Adenine PRTase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-36  Score=231.82  Aligned_cols=173  Identities=42%  Similarity=0.801  Sum_probs=157.7

Q ss_pred             ChhHHHHhhcccccCCCCCCCceEEechhhhcCHHHHHHHHHHHHHHHhc---CCCcEEEEeCCCChhhHHHHHHHhCCC
Q 029741           11 DPRLQGISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRD---MGISVVAGIEARGFVFGPSIALAIGAK   87 (188)
Q Consensus        11 ~~~~~~~~~~~r~~~~~~~~g~~~~d~~~ll~~~~~~~~l~~~la~~~~~---~~~d~Iv~v~~gG~~~a~~lA~~l~~p   87 (188)
                      +|.|+.|.+.+|..|+||++|++|+|+..++.||+.++.+++.+++++.+   .++|+|++++.+|+++|..+|..||+|
T Consensus         1 ~~~~~~l~~~i~~~pd~P~~Gi~f~Di~~il~~P~~~~~~~~~la~~~~~~~~~~~D~Iv~~e~~Gi~la~~lA~~l~~p   80 (178)
T d1zn7a1           1 DSELQLVEQRIRSFPDFPTPGVVFRDISPVLKDPASFRAAIGLLARHLKATHGGRIDYIAGLDSRGFLFGPSLAQELGLG   80 (178)
T ss_dssp             CHHHHHHHTTCEEEETSSSTTCEEEECHHHHHSHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTGGGGTHHHHHHHHTCE
T ss_pred             ChHHHHHHHhccccCCCCCCCCeEEECchhhhCHHHHHHHHHHHHhhhhhhcCCCcceEEEeccccchhhhhhHHHcCCC
Confidence            57899999999999999999999999999999999999999999988864   479999999999999999999999999


Q ss_pred             eEEEeecCCCCCcccchheeeeccceeEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChh-
Q 029741           88 FVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE-  166 (188)
Q Consensus        88 ~~~~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~-  166 (188)
                      ++++||..+.+.......+..+++...+++..+.+.+|++||||||+++||+|+.+++++++++||+++++++++++.+ 
T Consensus        81 ~v~~Rk~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~rVlIVDDviaTGgT~~a~~~ll~~~Ga~vvg~~~ii~~~~~  160 (178)
T d1zn7a1          81 CVLIRKRGKLPGPTLWASYSLEYGKAELEIQKDALEPGQRVVVVDDLLATGGTMNAACELLGRLQAEVLECVSLVELTSL  160 (178)
T ss_dssp             EEEEEETTCCCSSEEEEEEEETTEEEEEEEETTSSCTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEEEGGG
T ss_pred             ceEeeecCCCCccceeEEeeccccccceeeccCcccCCCeEEEehhhhhhchHHHHHHHHHHHCCCEEEEEEEEEEcCcC
Confidence            9999998887776665556666666677777777789999999999999999999999999999999999999999876 


Q ss_pred             -hhhccCCCCeEEEEecc
Q 029741          167 -GQRRLDGKPLYILVEPR  183 (188)
Q Consensus       167 -~~~~l~~~~~~~l~~~~  183 (188)
                       ++++++++|++||++++
T Consensus       161 ~g~~~l~~~pv~SL~~~d  178 (178)
T d1zn7a1         161 KGREKLAPVPFFSLLQYE  178 (178)
T ss_dssp             CHHHHHTTSCEEEEEEEC
T ss_pred             CHHHhcCCCCeEEEEEeC
Confidence             78899999999999875

>d1g2qa_ c.61.1.1 (A:) Adenine PRTase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Adenine PRTase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=6.5e-35  Score=223.05  Aligned_cols=166  Identities=37%  Similarity=0.735  Sum_probs=146.2

Q ss_pred             HHHHhhcccccCCCCCCCceEEechhhhcCHHHHHHHHHHHHHHHh----cCCCcEEEEeCCCChhhHHHHHHHhCCCeE
Q 029741           14 LQGISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYR----DMGISVVAGIEARGFVFGPSIALAIGAKFV   89 (188)
Q Consensus        14 ~~~~~~~~r~~~~~~~~g~~~~d~~~ll~~~~~~~~l~~~la~~~~----~~~~d~Iv~v~~gG~~~a~~lA~~l~~p~~   89 (188)
                      ++++++.+|..|+||.+|+.|+|+.+++.||+.++.+++.+++++.    ..++|+|++++.+|+++|..+|.+||+|++
T Consensus         7 ~~~~~~~i~~~~dfP~~Gi~f~Di~~ll~dP~~~~~li~~l~~~l~~~~~~~~vD~Ivg~e~~Gi~la~~vA~~L~~p~v   86 (178)
T d1g2qa_           7 AQELKLALHQYPNFPSEGILFEDFLPIFRNPGLFQKLIDAFKLHLEEAFPEVKIDYIVGLESRGFLFGPTLALALGVGFV   86 (178)
T ss_dssp             HHHHHHHCEEETTCSSTTCCEEECHHHHHSHHHHHHHHHHHHHHHHHHCTTSCCCEEEEETTTHHHHHHHHHHHHTCEEE
T ss_pred             HHHHHHhccCCCCCCCCCceEecChhhhcCHHHHHHHHHHHHHHHHhhhccCCCcEEEEeccccchhhHHHHHHhCCcee
Confidence            6789999999999999999999999999999998877777666554    458999999999999999999999999999


Q ss_pred             EEeecCCCCCcccchheeeeccceeEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChh--h
Q 029741           90 PLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--G  167 (188)
Q Consensus        90 ~~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~--~  167 (188)
                      ++||.++.+.......+..+++...+.+..+.+.+|++||||||+++||+|+.+++++++++||+++++++++++++  +
T Consensus        87 ~~RK~~k~~~~~~~~~~~~~~~~~~l~~~~~~l~~g~rVlIVDDviaTGgT~~a~~~ll~~~Ga~vvgv~viid~~~~~g  166 (178)
T d1g2qa_          87 PVRKAGKLPGECFKATYEKEYGSDLFEIQKNAIPAGSNVIIVDDIIATGGSAAAAGELVEQLEANLLEYNFVMELDFLKG  166 (178)
T ss_dssp             EEEETTCSCSSEEEEEEECSSCEEEEEEETTSSCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEECCCSSC
T ss_pred             eeeecccccccceEEEeeccccceeeeeccccccCCCEEEEEehHhhhChHHHHHHHHHHHcCCEEEEEEEEEEcCCCCc
Confidence            99998887766555445555556677777777889999999999999999999999999999999999999999976  7


Q ss_pred             hhccCCCCeEEEE
Q 029741          168 QRRLDGKPLYILV  180 (188)
Q Consensus       168 ~~~l~~~~~~~l~  180 (188)
                      +++| +.|++||+
T Consensus       167 ~~~l-~~pv~SLi  178 (178)
T d1g2qa_         167 RSKL-NAPVFTLL  178 (178)
T ss_dssp             CCCC-SSCEEECC
T ss_pred             hHHc-CCCeEEeC
Confidence            7878 68999984

>d1l1qa_ c.61.1.1 (A:) Adenine PRTase {Giardia lamblia [TaxId: 5741]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Adenine PRTase
species: Giardia lamblia [TaxId: 5741]

Probab=100.00  E-value=3.3e-34  Score=219.70  Aligned_cols=170  Identities=32%  Similarity=0.595  Sum_probs=151.3

Q ss_pred             HHHHhhcccccCCCCCCCceEEechhhhcCHHHHHHHHHHHHHHHhcCCCcEEEEeCCCChhhHHHHHHHhCCCeEEEee
Q 029741           14 LQGISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLRK   93 (188)
Q Consensus        14 ~~~~~~~~r~~~~~~~~g~~~~d~~~ll~~~~~~~~l~~~la~~~~~~~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~~~k   93 (188)
                      +..+.+++|..|+||++|+.|+|+..++.||+.++.+++.+++++.+.++|+|++++.+|+++|..+|..||+|++++||
T Consensus         4 ~~~~~~~i~~~~dfp~~Gi~F~Di~~il~dp~~~~~~~~~la~~~~~~~~d~Ivgie~~Gi~lA~~lA~~Lg~p~v~~rk   83 (181)
T d1l1qa_           4 VADAHALIKTIPDFPTKGIAFKDLSDILSTPAALDAVRKEVTAHYKDVPITKVVGIESRGFILGGIVANSLGVGFVALRK   83 (181)
T ss_dssp             HHHHHHTCEEETTCSSTTCCEEECHHHHTCHHHHHHHHHHHHHHTTTSCCCEEEEESGGGHHHHHHHHHHHTCEEEEEEE
T ss_pred             hHHHHHhcCCCCCCCCCCccEEechhhhCCHHHHHHHHHHHHHHHhccCCCEEEeeccchhhhHHHHHHHhCCCceeEee
Confidence            34588999999999999999999999999999999999999999998899999999999999999999999999999998


Q ss_pred             cCCCCCcccchheeeeccce-eEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeE--EEEEEEeeChh--hh
Q 029741           94 PNKLPGEVISEAYVLEYGTD-RLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEV--VECACVVGLPE--GQ  168 (188)
Q Consensus        94 ~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~--v~v~~l~~~~~--~~  168 (188)
                      ..+.++......+..++++. .+++..+.+.+|++||||||+++||+|+.+++++++++|+++  +++++++++.+  ++
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~lel~~~~l~~g~rVlIVDDvi~TGgT~~aa~~ll~~~Ga~v~~v~v~vlie~~~~~Gr  163 (181)
T d1l1qa_          84 AGKLPGDVCKCTFDMEYQKGVTIEVQKRQLGPHDVVLLHDDVLATGGTLLAAIELCETAGVKPENIYINVLYEIEALKGR  163 (181)
T ss_dssp             TTSSCSSEEEEEEEETTEEEEEEEEEGGGCCTTCCEEEEEEEESSSHHHHHHHHHHHHTTCCGGGEEEEEEEECGGGCHH
T ss_pred             cccccccccccccccCCCCCceeeeeeeeecCCCeeEEehhhhhhcHHHHHHHHHHHHCCCceEEEEEEEEEEcCcCChH
Confidence            88777776655555555543 577776677799999999999999999999999999999955  88899999875  78


Q ss_pred             hccC--CCCeEEEEecc
Q 029741          169 RRLD--GKPLYILVEPR  183 (188)
Q Consensus       169 ~~l~--~~~~~~l~~~~  183 (188)
                      ++|+  +++++||+.++
T Consensus       164 ~~l~~~g~~v~Sl~k~~  180 (181)
T d1l1qa_         164 EKVGQKCTRLFSVIREH  180 (181)
T ss_dssp             HHHTTTCCCEEEEEECC
T ss_pred             HHhhcCCCcEEEEEeec
Confidence            8887  89999999864

>d1qb7a_ c.61.1.1 (A:) Adenine PRTase {Leishmania donovani [TaxId: 5661]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Adenine PRTase
species: Leishmania donovani [TaxId: 5661]

Probab=99.98  E-value=2.4e-31  Score=210.96  Aligned_cols=179  Identities=32%  Similarity=0.516  Sum_probs=154.0

Q ss_pred             CCCChhHHHHhhccccc-CCC-CCCCceEEechhhhcCHHHHHHHHHHHHHHHhcC--CCcEEEEeCCCChhhHHHHHHH
Q 029741            8 LRGDPRLQGISKAIRVV-PDF-PIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRDM--GISVVAGIEARGFVFGPSIALA   83 (188)
Q Consensus         8 ~~~~~~~~~~~~~~r~~-~~~-~~~g~~~~d~~~ll~~~~~~~~l~~~la~~~~~~--~~d~Iv~v~~gG~~~a~~lA~~   83 (188)
                      +..|++.+.|.+.+|+. |.| |.+|..|+|+..++.+|+.++.+++.+++.+...  ++|+|+|++.+|+++|..+|.+
T Consensus        13 ~~~~~l~~~l~~~~~~~~p~~~p~~~~~F~Di~~ll~~P~~~~~l~~~l~~~~~~~~~~~D~Ivgies~Gi~la~~lA~~   92 (236)
T d1qb7a_          13 DDSHALSQLLKKSYRWYSPVFSPRNVPRFADVSSITESPETLKAIRDFLVQRYRAMSPAPTHILGFDARGFLFGPMIAVE   92 (236)
T ss_dssp             CTTSHHHHHHHHHCCEECGGGSSSCSSSEECTHHHHTCHHHHHHHHHHHHHHHHHCSSCCSEEEEETTGGGGTHHHHHHH
T ss_pred             hchHHHHHHHHhhccccCCCCCCCCCCEEEeChhHhcCHHHHHHHHHHHHHHHHhcCCCCCEEEeccccchhHHhhhhhh
Confidence            46789999999999976 887 8999999999999999999999999999999754  7999999999999999999999


Q ss_pred             hCCCeEEEeecCCCCCccc-chheeeeccc---eeEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEE
Q 029741           84 IGAKFVPLRKPNKLPGEVI-SEAYVLEYGT---DRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECA  159 (188)
Q Consensus        84 l~~p~~~~~k~~~~~~~~~-~~~~~~~~~~---~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~  159 (188)
                      ||+|++++||..+.++... .+++..+++.   +.+.+..+.+.+|++||||||+++||+|+.+++++++++|+++++++
T Consensus        93 Lg~p~v~vRK~~K~~g~~~~~~~~~~~y~~~~~~~l~i~~~~l~~g~rVlIVDDviaTGgT~~aa~~ll~~~Ga~Vvg~~  172 (236)
T d1qb7a_          93 LEIPFVLMRKADKNAGLLIRSEPYEKEYKEAAPEVMTIRYGSIGKGSRVVLIDDVLATGGTALSGLQLVEASDAVVVEMV  172 (236)
T ss_dssp             HTCCEEEEBCGGGCCSSEEECCCCCCCTTSCCCCCCEEETTSSCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEE
T ss_pred             hhcceeeeeeccccCCccceeeeEEeeecccccccccchhhcccCCceEEEehhhhhccHHHHHHHHHHHHCCCEEEEEE
Confidence            9999999999887766533 2334444433   34666667777999999999999999999999999999999999999


Q ss_pred             EEeeChh--hhhccC--------CCCeEEEEeccccc
Q 029741          160 CVVGLPE--GQRRLD--------GKPLYILVEPRLSV  186 (188)
Q Consensus       160 ~l~~~~~--~~~~l~--------~~~~~~l~~~~~~~  186 (188)
                      ++++..+  ++++++        ++|+++|++.+..+
T Consensus       173 ~vv~~~~~~g~~~l~~~~~~~~~~i~i~sL~~~d~l~  209 (236)
T d1qb7a_         173 SILSIPFLKAAEKIHSTANSRYKDIKFISLLSDDALT  209 (236)
T ss_dssp             EEEECGGGCHHHHHHHHHHHTTTTCCEEEEEEGGGCC
T ss_pred             EEEEcCCCChHHHHHhccccccCCccEEEeechhhhH
Confidence            9999875  666663        68999999987643

>d1o57a2 c.61.1.1 (A:75-276) Pur operon repressor (PurR), C-terminal domain {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Pur operon repressor (PurR), C-terminal domain
species: Bacillus subtilis [TaxId: 1423]

Probab=99.96  E-value=6.6e-29  Score=193.05  Aligned_cols=170  Identities=22%  Similarity=0.366  Sum_probs=135.2

Q ss_pred             hhHHHHhhcccccCCCCCCCceEEechhhhcCHHHHHHHHHHHHHHHhcCCCcEEEEeCCCChhhHHHHHHHhCCCeEEE
Q 029741           12 PRLQGISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPL   91 (188)
Q Consensus        12 ~~~~~~~~~~r~~~~~~~~g~~~~d~~~ll~~~~~~~~l~~~la~~~~~~~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~~   91 (188)
                      .+++.|.+.++. |++..+| .|+|+..++.||+.++.+++.+++.+.+.++|+|+|++.+|+++|..+|..||+|++++
T Consensus         8 ~~~~~l~~~l~~-~~~~lpg-~yid~~~ll~~P~~l~~i~~~la~~~~~~~iD~Vvgi~~~Gi~lA~~lA~~L~~p~v~~   85 (202)
T d1o57a2           8 EFVQTLGQSLAN-PERILPG-GYVYLTDILGKPSVLSKVGKLFASVFAEREIDVVMTVATKGIPLAYAAASYLNVPVVIV   85 (202)
T ss_dssp             HHHHHHHHHHTC-GGGEETT-TEECCTTTTTCHHHHHHHHHHHHHHTTTSCCSEEEEETTTTHHHHHHHHHHHTCCEEEE
T ss_pred             HHHHHHHHHhcC-CCccCCC-CeEECchhcCCHHHHHHHHHHHHHHhccCCCCEEEEeccCcchhhHHHHHHhhcceeee
Confidence            356666665544 4555454 38999999999999999999999999988999999999999999999999999999999


Q ss_pred             eecCCCC-Ccccchheeeecc--ceeEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChhhh
Q 029741           92 RKPNKLP-GEVISEAYVLEYG--TDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQ  168 (188)
Q Consensus        92 ~k~~~~~-~~~~~~~~~~~~~--~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~~~  168 (188)
                      ||..+.+ ..+++.++...++  ...+.+..+.+.+|++||||||+++||+|+.++++.++++||+++++++++++.+..
T Consensus        86 Rk~~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~l~~g~rVlIVDDvi~TG~T~~a~~~~l~~~Ga~vv~~~vlvd~~~~~  165 (202)
T d1o57a2          86 RKDNKVTEGSTVSINYVSGSSNRIQTMSLAKRSMKTGSNVLIIDDFMKAGGTINGMINLLDEFNANVAGIGVLVEAEGVD  165 (202)
T ss_dssp             BCC-----CCEEEEEEECSSCCSEEEEEEEGGGSCTTCEEEEEEEEESSSHHHHHHHHHTGGGTCEEEEEEEEEEESSCT
T ss_pred             eccCCCCCCCeEEEEeecCCCCccccchhcccccccCceEEEEhHHhhhhHHHHHHHHHHHHCCCEEEEEEEEEECCCcc
Confidence            8876543 3333333322222  124566666677999999999999999999999999999999999999999998755


Q ss_pred             hccC--CCCeEEEEecc
Q 029741          169 RRLD--GKPLYILVEPR  183 (188)
Q Consensus       169 ~~l~--~~~~~~l~~~~  183 (188)
                      +++.  ++++++|..++
T Consensus       166 ~~~~~~~~~l~sl~~i~  182 (202)
T d1o57a2         166 ERLVDEYMSLLTLSTIN  182 (202)
T ss_dssp             TSCCSCCEEEEEEECCC
T ss_pred             cchhhCCCceEEEEeEe
Confidence            5554  78888888876

>d1y0ba1 c.61.1.1 (A:1-191) Xanthine phosphoribosyltransferase {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Xanthine phosphoribosyltransferase
species: Bacillus subtilis [TaxId: 1423]

Probab=99.96  E-value=1.2e-28  Score=190.15  Aligned_cols=169  Identities=19%  Similarity=0.295  Sum_probs=136.1

Q ss_pred             HHHHhhcccccCCCCCCCceEEechhhh---cCHHHHHHHHHHHHHHHhcCCCcEEEEeCCCChhhHHHHHHHhCCCeEE
Q 029741           14 LQGISKAIRVVPDFPIPGIMFQDITTLL---LDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVP   90 (188)
Q Consensus        14 ~~~~~~~~r~~~~~~~~g~~~~d~~~ll---~~~~~~~~l~~~la~~~~~~~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~   90 (188)
                      |+.|.+.++.-+.++.+++++  ...++   .||++++.+++.+++++.+.++|+|+|++.+|+++|..+|..|++|+++
T Consensus         1 ~~~l~~~i~~~~~~~~~~~l~--~~~~l~~~~dP~ll~~i~~~la~~~~~~~~d~Ivg~~~~Gi~lA~~iA~~L~~p~v~   78 (191)
T d1y0ba1           1 MEALKRKIEEEGVVLSDQVLK--VDSFLNHQIDPLLMQRIGDEFASRFAKDGITKIVTIESSGIAPAVMTGLKLGVPVVF   78 (191)
T ss_dssp             HHHHHHHHHHHCEEETTTEEE--CTTTTSSEECHHHHHHHHHHHHHHTTTTTCCEEEEETTTTHHHHHHHHHHHTCCEEE
T ss_pred             ChHHHHHHhcCCeeCCCCcEe--ehHhhCcccCHHHHHHHHHHHHHHhccCCCCEEEecCcccHHHHHHHHhhccceEEE
Confidence            466677777767766556554  44555   4899999999999999998889999999999999999999999999999


Q ss_pred             EeecCCCCCcc--cchh-eeeecc-ceeEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChh
Q 029741           91 LRKPNKLPGEV--ISEA-YVLEYG-TDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE  166 (188)
Q Consensus        91 ~~k~~~~~~~~--~~~~-~~~~~~-~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~  166 (188)
                      +||..+.++..  ...+ ++.+.+ ...+.+..+.+.+|++|+||||+++||+|+.+++++++++|++++++++++++++
T Consensus        79 ~Rk~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~rVlIVDDvi~TG~T~~~~~~ll~~~Ga~vv~v~vlid~~~  158 (191)
T d1y0ba1          79 ARKHKSLTLTDNLLTASVYSFTKQTESQIAVSGTHLSDQDHVLIIDDFLANGQAAHGLVSIVKQAGASIAGIGIVIEKSF  158 (191)
T ss_dssp             EBSSCCSSCCSSEEEEEEEETTTTEEEEEEEEGGGCCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEEETT
T ss_pred             EEeecCcCCCCceeEEEEEeeeccceeeeeeehhhhcCCceEEEhHHhhhhChHHHHHHHHHHHCCCEEEEEEEEEEcCC
Confidence            99887655331  1111 111111 2245565566779999999999999999999999999999999999999999975


Q ss_pred             --hhhccC--CCCeEEEEeccc
Q 029741          167 --GQRRLD--GKPLYILVEPRL  184 (188)
Q Consensus       167 --~~~~l~--~~~~~~l~~~~~  184 (188)
                        +++++.  |+|++||+++++
T Consensus       159 ~~gr~~l~~~g~~v~SL~~i~~  180 (191)
T d1y0ba1         159 QPGRDELVKLGYRVESLARIQS  180 (191)
T ss_dssp             STHHHHHHHTTCCEEEEEEEEE
T ss_pred             cCHHHHHHHCCCCEEEEEEEee
Confidence              677776  899999999986

>d2aeea1 c.61.1.1 (A:1-208) Orotate PRTase {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Orotate PRTase
species: Streptococcus pyogenes [TaxId: 1314]

Probab=99.93  E-value=9.7e-26  Score=175.70  Aligned_cols=143  Identities=23%  Similarity=0.347  Sum_probs=123.2

Q ss_pred             CceEEechhhhcCHHHHHHHHHHHHHHHhcC--CCcEEEEeCCCChhhHHHHHHHhCCCeEEEeecCCCCCcccchheee
Q 029741           31 GIMFQDITTLLLDHKAFKDTVDIFVDRYRDM--GISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVL  108 (188)
Q Consensus        31 g~~~~d~~~ll~~~~~~~~l~~~la~~~~~~--~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~~~k~~~~~~~~~~~~~~~  108 (188)
                      +..|+|.+.++.+|+.++.+++.+++.+.+.  ++|+|+|++.+|+++|..+|..+++|++++||..+.++.        
T Consensus        33 S~~Y~d~~~~~~~p~~~~~i~~~~~~~i~~~~~~~d~I~G~a~~Gip~a~~ia~~~~~p~~~vRK~~K~~G~--------  104 (208)
T d2aeea1          33 SPIYTDNRVTLSYPKTRDLIENGFVETIKAHFPEVEVIAGTATAGIPHGAIIADKMTLPFAYIRSKPKDHGA--------  104 (208)
T ss_dssp             ESEEECGGGGGGCHHHHHHHHHHHHHHHHHHCTTCCEEEEETTTTHHHHHHHHHHHTCCEEEECSSCC------------
T ss_pred             ChhheeChhhhcCHHHHHHHHHHHHHHHhhcccccccccccchhhhHHHHHHHHhhccceEEeeeccccccc--------
Confidence            3679999999999999999999999988643  789999999999999999999999999999988764432        


Q ss_pred             eccceeEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChh--hhhccC--CCCeEEEEeccc
Q 029741          109 EYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLD--GKPLYILVEPRL  184 (188)
Q Consensus       109 ~~~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~--~~~~l~--~~~~~~l~~~~~  184 (188)
                         ...++   +...+|++|+||||++|||+|+.++++.|+++|++++++++++++..  +.+++.  |++++||+++++
T Consensus       105 ---~~~ie---G~~~~G~~VlvVeDviTTG~S~~~ai~~l~~~g~~V~~~~vivdr~~~~~~~~l~~~gi~~~sL~~~~d  178 (208)
T d2aeea1         105 ---GNQIE---GRVLKGQKMVIIEDLISTGGSVLDAAAAASREGADVLGVVAIFTYELPKASQNFKEAGIKLITLSNYTE  178 (208)
T ss_dssp             ---CCSEE---SCCCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEECCCHHHHHHHHHHTCCEEESCCHHH
T ss_pred             ---cceee---ccccCCCEEEEehhhhhhcccHHHHHHHHHHcCCEEEEEEEEEEcccchHHHHHHHcCCCEEEEecHHH
Confidence               11222   55678999999999999999999999999999999999999999973  556665  999999999998


Q ss_pred             ccc
Q 029741          185 SVN  187 (188)
Q Consensus       185 ~~~  187 (188)
                      .++
T Consensus       179 ll~  181 (208)
T d2aeea1         179 LIA  181 (208)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            665

>d1vcha1 c.61.1.1 (A:2-175) Putative phosphoribosyltransferase TTHA1613 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Putative phosphoribosyltransferase TTHA1613
species: Thermus thermophilus [TaxId: 274]

Probab=99.92  E-value=7.6e-26  Score=171.90  Aligned_cols=149  Identities=19%  Similarity=0.200  Sum_probs=116.5

Q ss_pred             HhhcccccCCCCCCCceEEechhhhcCHHHHHHHHHHHHHHHhcCCCcEEEEeCCCChhhHHHHHHHhCCCeEEEeecCC
Q 029741           17 ISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNK   96 (188)
Q Consensus        17 ~~~~~r~~~~~~~~g~~~~d~~~ll~~~~~~~~l~~~la~~~~~~~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~~~k~~~   96 (188)
                      +....|.+|.++.....|++...++.||+..+.+++.+++.+. .++|+|+|++.+|+++|..+|..|++|++++||+++
T Consensus         7 ~~~~~r~lp~~~~~~~~~i~~~~~l~dp~~~~~~~~~la~~~~-~~~D~Ivgi~~~Gi~~A~~lA~~L~~p~~~~rk~~k   85 (174)
T d1vcha1           7 VGGVTRHVPLIEPLPGRRIPLVEFLGDPEFTRAAAEALRPLVP-KEAEILFTTETSPIPLTHVLAEALGLPYVVARRRRR   85 (174)
T ss_dssp             ETTEEEEECEEEEETTEEEECCCCTTCHHHHHHHHHHHGGGSC-TTCCEEEEESSTHHHHHHHHHHHHTCCEEEEBSSCC
T ss_pred             eCCceeeCCCcccCCcceEEchhhhCCHHHHHHHHHHHHHHcC-CCCCEEEecCCCcchHhHHHHHHcCCCEEEEEEecc
Confidence            3455688898886666899999999999999999999998774 579999999999999999999999999999988765


Q ss_pred             CCCc--ccchheeeeccce-eEEEec--CCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChh
Q 029741           97 LPGE--VISEAYVLEYGTD-RLEMHV--GAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE  166 (188)
Q Consensus        97 ~~~~--~~~~~~~~~~~~~-~~~l~~--~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~  166 (188)
                      ....  .....++.+.+.. ...+..  ....+|++||||||+++||+|+.++++.|+++||+++++++++.+++
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~rVlIVDDvi~TG~Tl~a~~~~l~~~Ga~vv~v~vl~~~G~  160 (174)
T d1vcha1          86 PYMEDPIIQEVQTLTLGVGEVLWLDRRFAEKLLNQRVVLVSDVVASGETMRAMEKMVLRAGGHVVARLAVFRQGT  160 (174)
T ss_dssp             TTCCSCEEEECCC------CEEEECHHHHHHHTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEECSC
T ss_pred             CCCCCCeEEEEEEEEeccceeEEEeeccccccCCCEEEEEeceecccHHHHHHHHHHHHCCCEEEEEEEEEeCCC
Confidence            4322  1111111112211 222221  12358999999999999999999999999999999999999999864

>d1lh0a_ c.61.1.1 (A:) Orotate PRTase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Orotate PRTase
species: Salmonella typhimurium [TaxId: 90371]

Probab=99.86  E-value=1.6e-21  Score=152.11  Aligned_cols=141  Identities=16%  Similarity=0.279  Sum_probs=110.3

Q ss_pred             CceEEechhhhcCHHHHHHHHHHHHHHHhc--CCCcEEEEeCCCChhhHHHHHHHh------CCCeEEEeecCCCCCccc
Q 029741           31 GIMFQDITTLLLDHKAFKDTVDIFVDRYRD--MGISVVAGIEARGFVFGPSIALAI------GAKFVPLRKPNKLPGEVI  102 (188)
Q Consensus        31 g~~~~d~~~ll~~~~~~~~l~~~la~~~~~--~~~d~Iv~v~~gG~~~a~~lA~~l------~~p~~~~~k~~~~~~~~~  102 (188)
                      +..|+|.+.+. ++.....++..++..+..  .++|+|+|++.||+++|..+|..+      ..|+.+.||..+.++.  
T Consensus        31 S~~Y~d~r~~~-~~~~~~~i~~~~~~~~~~~~~~~d~i~G~a~gGipla~~va~~l~~~~~~~~p~~~~Rke~k~~G~--  107 (213)
T d1lh0a_          31 SPYFFNAGLFN-TGRDLALLGRFYAEALVDSGIEFDLLFGPAYKGIPIATTTAVALAEHHDKDLPYCFNRKEAKDHGE--  107 (213)
T ss_dssp             EEEEECGGGCC-BHHHHHHHHHHHHHHHHHHCCCCSEEECCTTTHHHHHHHHHHHHHHHHCCCCBEEEECSSCCSSTT--
T ss_pred             CCEeEeCcccC-CcHHHHHHHHHHHHhhhhcccccceeccccccchHHHHHHHHHHHHhcCCCCceEEeecccccccc--
Confidence            37899988665 555567888888887754  378999999999999999999988      4588888877654332  


Q ss_pred             chheeeeccceeEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChh-hhhcc-------C--
Q 029741          103 SEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE-GQRRL-------D--  172 (188)
Q Consensus       103 ~~~~~~~~~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~-~~~~l-------~--  172 (188)
                               .+.++   +.. .+.+|+|||||+|||+|+.++++.|++.|++++++++++++.+ +...+       +  
T Consensus       108 ---------~~~ie---G~~-~~~~VliVeDViTTGgS~~eaie~l~~~G~~V~~v~vivDR~e~~~~~~~~~~~~~~~~  174 (213)
T d1lh0a_         108 ---------GGSLV---GSA-LQGRVMLVDDVITAGTAIRESMEIIQAHGATLAGVLISLDRQERGRGEISAIQEVERDY  174 (213)
T ss_dssp             ---------CSSEE---ESC-CCSEEEEECSCCSSSCHHHHHHHHHHHTTCEEEEEEEEEECCBBCSSSSBHHHHHHHHH
T ss_pred             ---------ccccc---cCc-CCCcEEEEccchhhcccHHHHHHHHHHhcccceeEEEEEeecccccchhHHHHHHHHHc
Confidence                     11232   333 3448999999999999999999999999999999999999975 22222       2  


Q ss_pred             CCCeEEEEecccccc
Q 029741          173 GKPLYILVEPRLSVN  187 (188)
Q Consensus       173 ~~~~~~l~~~~~~~~  187 (188)
                      |+|++||+++++.+.
T Consensus       175 gi~~~sl~~~~dl~~  189 (213)
T d1lh0a_         175 GCKVISIITLKDLIA  189 (213)
T ss_dssp             CCEEEEEEEHHHHHH
T ss_pred             CCeEEEEccHHHHHH
Confidence            899999999998553

>d1vdma1 c.61.1.1 (A:1-153) Pprobable purine phosphoribosyltransferase PH0095 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Pprobable purine phosphoribosyltransferase PH0095
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=99.84  E-value=3.2e-20  Score=137.68  Aligned_cols=137  Identities=16%  Similarity=0.282  Sum_probs=102.4

Q ss_pred             hhhcCHHHHHHHHHHHHHHHhcCCCcEEEEeCCCChhhHHHHHHHhC-CCeEEEeecCCCCCcccchheeeecc-ceeEE
Q 029741           39 TLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIG-AKFVPLRKPNKLPGEVISEAYVLEYG-TDRLE  116 (188)
Q Consensus        39 ~ll~~~~~~~~l~~~la~~~~~~~~d~Iv~v~~gG~~~a~~lA~~l~-~p~~~~~k~~~~~~~~~~~~~~~~~~-~~~~~  116 (188)
                      .+..+++.++..++.|++++.+.++|+|||+++||+++|..+|+.|+ .|+.++.........        +.+ ...+.
T Consensus         3 k~~~s~~~i~~~i~~la~~i~~~~~d~IVgI~~gG~~~A~~la~~L~~~~~~~~~~~~y~~~~--------~~~~~~~~~   74 (153)
T d1vdma1           3 KVYLTWWQVDRAIFALAEKLREYKPDVIIGVARGGLIPAVRLSHILGDIPLKVIDVKFYKGID--------ERGEKPVIT   74 (153)
T ss_dssp             EEECCHHHHHHHHHHHHHHHHHHCCSEEEEETTTTHHHHHHHHHHTTSCCEEEEEEECCCC----------CCCSSCEEE
T ss_pred             eEEcCHHHHHHHHHHHHHHHHccCCCEEEEECCCcchhHHHHHHHhCCCceEEEEEeeccccc--------ccCCcceee
Confidence            45678888999999999999877999999999999999999999997 566555433211100        111 11233


Q ss_pred             EecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChhhhhccCCCCeEEEEecccccc
Q 029741          117 MHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQRRLDGKPLYILVEPRLSVN  187 (188)
Q Consensus       117 l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~~~~~l~~~~~~~l~~~~~~~~  187 (188)
                      .......+|++||||||+++||+||.++++.|++.|++++.++++++++...  .  .|=+...+.++|+-
T Consensus        75 ~~~~~~~~gk~VLIVDDii~TG~Tl~~~~~~l~~~g~~~v~~avl~~k~~~~--~--~pDy~~~e~d~wiv  141 (153)
T d1vdma1          75 IPIHGDLKDKRVVIVDDVSDTGKTLEVVIEEVKKLGAKEIKIACLAMKPWTS--V--VPDYYVFRTEKWIV  141 (153)
T ss_dssp             ECCCSCCBTCEEEEEEEEESSCHHHHHHHHHHHTTTBSEEEEEEEEECTTCS--S--CCSBBCEECSSEEE
T ss_pred             cccccccCCCEEEEEeeeeccCCcHHHHHHHHHhcCCceEEEEEEEECCCCC--c--cCCEEEEEcCCeEE
Confidence            3223446899999999999999999999999999999999999999997643  2  23344455666653

>d1hgxa_ c.61.1.1 (A:) Hypoxanthine-guanine-xanthine PRTase {Tritrichomonas foetus [TaxId: 5724]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Hypoxanthine-guanine-xanthine PRTase
species: Tritrichomonas foetus [TaxId: 5724]

Probab=99.70  E-value=1.2e-16  Score=120.36  Aligned_cols=142  Identities=12%  Similarity=0.164  Sum_probs=97.9

Q ss_pred             chhhhcCHHHHHHHHHHHHHHHhcC---CCcEEEEeCCCChhhHHHHHHHhCCCeEE--EeecCCCCCcccchheeeecc
Q 029741           37 ITTLLLDHKAFKDTVDIFVDRYRDM---GISVVAGIEARGFVFGPSIALAIGAKFVP--LRKPNKLPGEVISEAYVLEYG  111 (188)
Q Consensus        37 ~~~ll~~~~~~~~l~~~la~~~~~~---~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~--~~k~~~~~~~~~~~~~~~~~~  111 (188)
                      +.+++.+++.++..++.||.++.+.   +..+++|+..||+.+|..|+..++.|...  +.-.... +..       ..+
T Consensus         4 i~~il~s~~~I~~~i~rlA~~I~~~~~~~~~vivgIl~GG~~fa~~L~~~l~~~~~~~~~~~~~y~-~~~-------~~~   75 (173)
T d1hgxa_           4 LERVLYNQDDIQKRIRELAAELTEFYEDKNPVMICVLTGAVFFYTDLLKHLDFQLEPDYIICSSYS-GTK-------STG   75 (173)
T ss_dssp             EEEEEECHHHHHHHHHHHHHHHHHHHTTTCCEEEEETTTTHHHHHHHHTTCCSCCEEEEEEEEC----------------
T ss_pred             hheEecCHHHHHHHHHHHHHHHHHHcCCCCcEEEEEecCcHHHHHHHHHhcCCCceeEEEEEEecC-Ccc-------ccc
Confidence            4556778888887777777766432   45689999999999999999999988643  2211110 100       011


Q ss_pred             ceeEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChhhhhccCCCCeEEEEeccc-cc
Q 029741          112 TDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQRRLDGKPLYILVEPRL-SV  186 (188)
Q Consensus       112 ~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~~~~~l~~~~~~~l~~~~~-~~  186 (188)
                      ...+........+||+|||||||++||+|+..+.+.|.+.|++.+.++++++++.+++.+.=.+=++-.++++ ||
T Consensus        76 ~~~i~~~~~~~~~gk~VLlVDDI~dtG~Tl~~~~~~l~~~~p~~v~~avL~~K~~~~~~~~i~~dy~g~~i~~~~v  151 (173)
T d1hgxa_          76 NLTISKDLKTNIEGRHVLVVEDIIDTGLTMYQLLNNLQMRKPASLKVCTLCDKDIGKKAYDVPIDYCGFVVENRYI  151 (173)
T ss_dssp             -CEEEECCSSCCTTSEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEEEECCSSCSSCCCCSEEEEEECSSCE
T ss_pred             ceeeeecccccccccceeEEeeEechhHHHHHHHHHHHhcCCCeeEEEEEEEeccccccCCCCCcEEEEEcCCCEE
Confidence            1123322234569999999999999999999999999999999999999999976543332112245555665 54

>d1u9ya2 c.61.1.2 (A:156-284) Phosphoribosylpyrophosphate synthetase {Methanocaldococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosylpyrophosphate synthetase-like
domain: Phosphoribosylpyrophosphate synthetase
species: Methanocaldococcus jannaschii [TaxId: 2190]

Probab=99.68  E-value=2.6e-17  Score=118.52  Aligned_cols=107  Identities=22%  Similarity=0.353  Sum_probs=82.1

Q ss_pred             EEEEeCCCChhhHHHHHHHhCCCeEEEeecCCCCCcccchheeeeccceeEEEecCCCCCCCEEEEEcCcccchHHHHHH
Q 029741           65 VVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAA  144 (188)
Q Consensus        65 ~Iv~v~~gG~~~a~~lA~~l~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~  144 (188)
                      +|++|+.||+.+|..+|+.||.|+.++.|++..+...            ......+ ..+||+|+||||+++||+|+.++
T Consensus         3 ViVsPD~G~~~~a~~~a~~l~~~~a~~~K~R~~~~~~------------~~~~~~g-dv~gk~viIvDDii~TGgTl~~a   69 (129)
T d1u9ya2           3 IVLAPDKGALEFAKTASKILNAEYDYLEKTRLSPTEI------------QIAPKTL-DAKDRDVFIVDDIISTGGTMATA   69 (129)
T ss_dssp             EEEESSGGGHHHHHHHHHHHTCCEEEBC----------------------CCBSSC-CCTTCCEEEEEEECSSSHHHHHH
T ss_pred             EEEEECccHHHHHHHHHHHcCCCEEEEEeeecccccc------------eeecccc-cccceEEEEEcchhcccccHHHH
Confidence            7899999999999999999999999887766422110            0000012 35999999999999999999999


Q ss_pred             HHHHHHcCCeEEEEEEEeeChh--hhhccCCCCeEEEEeccc
Q 029741          145 VRLLERMGAEVVECACVVGLPE--GQRRLDGKPLYILVEPRL  184 (188)
Q Consensus       145 ~~~L~~~Ga~~v~v~~l~~~~~--~~~~l~~~~~~~l~~~~~  184 (188)
                      ++.|++.||+.|++++.|....  +.++|...++..+++.+.
T Consensus        70 a~~Lk~~GA~~V~~~~tHgifs~~a~~~l~~~~i~~iv~Tnt  111 (129)
T d1u9ya2          70 VKLLKEQGAKKIIAACVHPVLIGDALNKLYSAGVEEVVGTDT  111 (129)
T ss_dssp             HHHHHHTTCCSEEEEEEECCCCTTHHHHHHHHTCSEEEEETT
T ss_pred             HHHHHhcCCcceEEEEeccccChHHHHHHHhCCCCEEEEcCC
Confidence            9999999999999999998754  667777556777776654

>d1yfza1 c.61.1.1 (A:3-180) Xanthine-guanine PRTase (XPRTase) {Thermoanaerobacter tengcongensis [TaxId: 119072]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Xanthine-guanine PRTase (XPRTase)
species: Thermoanaerobacter tengcongensis [TaxId: 119072]

Probab=99.68  E-value=3e-16  Score=118.71  Aligned_cols=141  Identities=17%  Similarity=0.170  Sum_probs=99.8

Q ss_pred             echhhhcCHHHHHHHHHHHHHHHhcC---CCcEEEEeCCCChhhHHHHHHHhCCCeEE--EeecCCCCCcccchheeeec
Q 029741           36 DITTLLLDHKAFKDTVDIFVDRYRDM---GISVVAGIEARGFVFGPSIALAIGAKFVP--LRKPNKLPGEVISEAYVLEY  110 (188)
Q Consensus        36 d~~~ll~~~~~~~~l~~~la~~~~~~---~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~--~~k~~~~~~~~~~~~~~~~~  110 (188)
                      |+..++.+++.++..++.||.++.+.   +..+++|+..||+.+|..|+..|+.|...  +..... .....      ..
T Consensus         5 ~i~~vl~s~e~I~~~i~~LA~~I~~~~~~~~~vivgI~~GG~~fa~~L~~~l~~~~~~~~~~~~~y-~~~~~------~~   77 (178)
T d1yfza1           5 DIEEILITEEQLKAKVKELGEMITRDYEGKDLVLIGVLKGAIMFMSGLSRAIDLPLSIDFLAVSSY-GSSTK------SS   77 (178)
T ss_dssp             SEEEEEECHHHHHHHHHHHHHHHHHHTTTSCEEEEEETTTHHHHHHHHHHTCCSCCEEEEEEEEEC-SHHHH------HH
T ss_pred             chheEEcCHHHHHHHHHHHHHHHHHHhCCCCcEEEEecCCceeHHHHHHhhcccceeeeEEEEEEe-cCCee------cC
Confidence            45667889999998888888888532   45589999999999999999999988633  221111 00000      01


Q ss_pred             cceeEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChhhhhccCCCCeEEEEeccc
Q 029741          111 GTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQRRLDGKPLYILVEPRL  184 (188)
Q Consensus       111 ~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~~~~~l~~~~~~~l~~~~~  184 (188)
                      +...+........+||+|||||||+.||+||..+.+.|.+.|++.+.+++++.++..+ .+.-.|=+.-+++++
T Consensus        78 ~~~~~~~~~~~~~~gk~VLlVDDVldTG~Tl~~~~~~l~~~~~~~v~~avL~~K~~~~-~~~i~~Dy~G~~i~d  150 (178)
T d1yfza1          78 GIVKIIKDHDIDIEGKDVLIVEDIIDSGLTLAYLRETLLGRKPRSLKICTILDKPERR-EADVKVDYCGFKIPD  150 (178)
T ss_dssp             CCEEEEECCCSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGGGC-CSCCCCSEEEEECCS
T ss_pred             CceEEecCCccCCCCCEEEEEeeeehhhHHHHHHHHHHHhhCccceEEEEEEEcCCcC-cCCCCCCEEEEEcCC
Confidence            1112222223346999999999999999999999999999999999999999997532 333223455556655

>d1dkua2 c.61.1.2 (A:167-315) Phosphoribosylpyrophosphate synthetase {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosylpyrophosphate synthetase-like
domain: Phosphoribosylpyrophosphate synthetase
species: Bacillus subtilis [TaxId: 1423]

Probab=99.65  E-value=3.3e-16  Score=115.17  Aligned_cols=107  Identities=23%  Similarity=0.353  Sum_probs=85.8

Q ss_pred             EEEEeCCCChhhHHHHHHHhCCCeEEEeecCCCCCcccchheeeeccceeEEEecCCCCCCCEEEEEcCcccchHHHHHH
Q 029741           65 VVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAA  144 (188)
Q Consensus        65 ~Iv~v~~gG~~~a~~lA~~l~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~  144 (188)
                      +|++|+.||...|..+|+.||.|+..+.|++..+...           ....+ .++ .+||+|+||||+++||+|+..+
T Consensus         3 vvVsPD~G~~kra~~~a~~l~~~~a~~~K~r~~~~~~-----------~~~~~-~Gd-V~gk~viIvDDmi~TGgTl~~a   69 (149)
T d1dkua2           3 VIVSPDHGGVTRARKLADRLKAPIAIIDKRRPRPNVA-----------EVMNI-VGN-IEGKTAILIDDIIDTAGTITLA   69 (149)
T ss_dssp             EEEESSGGGHHHHHHHHHHTTCCEEEEECC--------------------CEE-ESC-CTTCEEEEECSEESSCHHHHHH
T ss_pred             EEEEeCccHHHHHHHHHHHcCCCEEEEEeccCCCCee-----------EEEee-eee-eCCCEEEEEhhhhhchHhHHHH
Confidence            6889999999999999999999999887766322211           01112 144 5999999999999999999999


Q ss_pred             HHHHHHcCCeEEEEEEEeeChh--hhhccCCCCeEEEEeccc
Q 029741          145 VRLLERMGAEVVECACVVGLPE--GQRRLDGKPLYILVEPRL  184 (188)
Q Consensus       145 ~~~L~~~Ga~~v~v~~l~~~~~--~~~~l~~~~~~~l~~~~~  184 (188)
                      ++.|++.||+.|++++.|....  +.++|++.++..+++.+.
T Consensus        70 a~~L~~~GA~~V~~~~THglfs~~a~~~l~~~~i~~ivvTnT  111 (149)
T d1dkua2          70 ANALVENGAKEVYACCTHPVLSGPAVERINNSTIKELVVTNS  111 (149)
T ss_dssp             HHHHHHTTCSEEEEECSEECCCTTHHHHHHTSSEEEEEEETT
T ss_pred             HHHHHHhCCceEEEEEeecccCchHHHHHhccCCceEEEeCC
Confidence            9999999999999999998754  777788778999887765

>d1nula_ c.61.1.1 (A:) Xanthine-guanine PRTase (XPRTase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Xanthine-guanine PRTase (XPRTase)
species: Escherichia coli [TaxId: 562]

Probab=99.63  E-value=8.8e-16  Score=113.11  Aligned_cols=114  Identities=20%  Similarity=0.259  Sum_probs=83.0

Q ss_pred             hhcCHHHHHHHHHHHHHHHhcC-CCcEEEEeCCCChhhHHHHHHHhCCCeEEEeecCCCCCcccchheeeeccceeEEEe
Q 029741           40 LLLDHKAFKDTVDIFVDRYRDM-GISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMH  118 (188)
Q Consensus        40 ll~~~~~~~~l~~~la~~~~~~-~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~l~  118 (188)
                      ++.+++.+...+..|++++.+. ++++|+|+.+||+.+|..|++.|+.|...........+.        ..+...+.  
T Consensus         3 ~~isw~~i~~~~~~La~~I~~~~~~~~IvgI~rGG~i~a~~L~~~l~~~~~~~~~~~~y~~~--------~~~~~~~~--   72 (150)
T d1nula_           3 YIVTWDMLQIHARKLASRLMPSEQWKGIIAVSRGGLVPGALLARELGIRHVDTVCISSYDHD--------NQRELKVL--   72 (150)
T ss_dssp             EECCHHHHHHHHHHHHHHHCSGGGCSEEEEEETTTHHHHHHHHHHHTCCCEEEEEEEC----------------CEEE--
T ss_pred             EEecHHHHHHHHHHHHHHHHhhCCCCEEEEEccChhHHHHHHHHHhccCcceEEEEEeccCc--------cccceeee--
Confidence            3568888999999999988544 689999999999999999999999986543221111110        01111121  


Q ss_pred             cCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChhhh
Q 029741          119 VGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQ  168 (188)
Q Consensus       119 ~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~~~  168 (188)
                      ......||+|||||||++||.||..+.+.+++     +.+++++.++.++
T Consensus        73 ~~~~~~gk~VLiVDDI~dtG~Tl~~~~~~l~~-----~~~atl~~k~~~~  117 (150)
T d1nula_          73 KRAEGDGEGFIVIDDLVDTGGTAVAIREMYPK-----AHFVTIFAKPAGR  117 (150)
T ss_dssp             ECCSSCCTTEEEEEEEECTTSSHHHHHHHCTT-----SEEEEEEECGGGG
T ss_pred             eccccCCCceEEEEecccchHHHHHHHHHhhc-----CcEEEEEEccCCC
Confidence            23345899999999999999999999999865     3577888887654

>d1tc1a_ c.61.1.1 (A:) Hypoxanthine PRTase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Hypoxanthine PRTase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.63  E-value=5e-15  Score=112.39  Aligned_cols=142  Identities=15%  Similarity=0.213  Sum_probs=94.3

Q ss_pred             chhhhcCHHHHHHHHHHHHHHHhc----------CCCcEEEEeCCCChhhHHHHHHHh---CCCeEE--EeecCCCCCcc
Q 029741           37 ITTLLLDHKAFKDTVDIFVDRYRD----------MGISVVAGIEARGFVFGPSIALAI---GAKFVP--LRKPNKLPGEV  101 (188)
Q Consensus        37 ~~~ll~~~~~~~~l~~~la~~~~~----------~~~d~Iv~v~~gG~~~a~~lA~~l---~~p~~~--~~k~~~~~~~~  101 (188)
                      ...++.+++.+...++.||.++.+          .++.+++|+..||+.+|..|+..|   ..|...  +.-........
T Consensus         4 ~ekil~s~~eI~~~i~~lA~qI~~~y~~~~~~~~~~~~viigI~~Gg~~fa~~L~~~l~~~~~~~~i~~~~~~~~~~~~~   83 (184)
T d1tc1a_           4 AEKILFTEEEIRTRIKEVAKRIADDYKGKGLRPYVNPLVLISVLKGSFMFTADLCRALCDFNVPVRMEFICVSSYGEGLT   83 (184)
T ss_dssp             SCCEEECHHHHHHHHHHHHHHHHHHHTTSCCBTTTBCEEEEEETTTTHHHHHHHHHHHHHTTCCEEEEEEEEECC-----
T ss_pred             ccEEEcCHHHHHHHHHHHHHHHHHHhcccccccCCCCeEEEEEcCCcHHHHHHHHHHhhhcCCCeeeeeEEEEeeccccc
Confidence            445667887777777777766643          134588999999999999999987   344322  22111100000


Q ss_pred             cchheeeeccceeEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChhhhhccCCCCeEEEEe
Q 029741          102 ISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQRRLDGKPLYILVE  181 (188)
Q Consensus       102 ~~~~~~~~~~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~~~~~l~~~~~~~l~~  181 (188)
                             ..+............+||+|||||||+.||.||.++++.|++.|++.+.+++++.++..+ ++.-.|=++-++
T Consensus        84 -------~~~~~~~~~~~~~~~~gk~VLlVDDIldTG~Tl~~~~~~l~~~~~~~i~~avL~~k~~~r-~~~i~~Dy~G~~  155 (184)
T d1tc1a_          84 -------SSGQVRMLLDTRHSIEGHHVLIVEDIVDTALTLNYLYHMYFTRRPASLKTVVLLDKREGR-RVPFSADYVVAN  155 (184)
T ss_dssp             -----------CEEEECCSSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECTTCC-SSCCCCSEEEEE
T ss_pred             -------ccccccccccCcccccceeEEEEecchhHHHHHHHHHHHHhhhcCccccEEEEEEecccc-cCCCCCCEEEEE
Confidence                   001112222223446999999999999999999999999999999999999999876432 333234466667


Q ss_pred             ccc-cc
Q 029741          182 PRL-SV  186 (188)
Q Consensus       182 ~~~-~~  186 (188)
                      +++ ||
T Consensus       156 ipd~~v  161 (184)
T d1tc1a_         156 IPNAFV  161 (184)
T ss_dssp             CCSCEE
T ss_pred             eCCeeE
Confidence            755 54

>d1wd5a_ c.61.1.1 (A:) Putative phosphoribosyltransferase TT1426 (TTHA1462) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Putative phosphoribosyltransferase TT1426 (TTHA1462)
species: Thermus thermophilus [TaxId: 274]

Probab=99.62  E-value=2.7e-15  Score=115.87  Aligned_cols=124  Identities=23%  Similarity=0.331  Sum_probs=83.2

Q ss_pred             HHHHHHHHHHhcC--CCcEEEEeCCCChhhHHHHHHHhCCCeEEE--eecCCCCCc-c-c---chh------------ee
Q 029741           49 DTVDIFVDRYRDM--GISVVAGIEARGFVFGPSIALAIGAKFVPL--RKPNKLPGE-V-I---SEA------------YV  107 (188)
Q Consensus        49 ~l~~~la~~~~~~--~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~~--~k~~~~~~~-~-~---~~~------------~~  107 (188)
                      ..++.|++.+...  +.++|++++.||+++|..+|..|+.|+..+  ++.+..... . +   +..            ..
T Consensus         8 ~Ag~~LA~~l~~~~~~~~vVl~ip~ggv~~A~~iA~~L~~p~d~~~~~~i~~p~~~e~~~gavs~~~~~~~~~~~~~~~~   87 (208)
T d1wd5a_           8 HAGALLAEALAPLGLEAPVVLGLPRGGVVVADEVARRLGGELDVVLVRKVGAPGNPEFALGAVGEGGELVLMPYALRYAD   87 (208)
T ss_dssp             HHHHHHHHHHGGGCCCSCEEEECTTHHHHHHHHHHHHHTCEEEECCEEEEEETTEEEEEEEEEETTCCEEECTTHHHHSC
T ss_pred             HHHHHHHHHHHHcCCCCCEEEeCCCCcHHHHHHHHHHcCCCceeEEEeeccCCCchhhhhceeecCCCeEechHHHhhcC
Confidence            4466666666543  457999999999999999999999998543  222110000 0 0   000            00


Q ss_pred             ee--------------ccceeE-EEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChhhhhccC
Q 029741          108 LE--------------YGTDRL-EMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQRRLD  172 (188)
Q Consensus       108 ~~--------------~~~~~~-~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~~~~~l~  172 (188)
                      ..              ...... ........+||+|+||||+++||.||.++++.|+++|++.+.+++.+..+++.+.++
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~gk~ViLVDD~I~TG~T~~aa~~~L~~~ga~~V~~a~~v~~~~~~~~l~  167 (208)
T d1wd5a_          88 QSYLEREAARQRDVLRKRAERYRRVRPKAARKGRDVVLVDDGVATGASMEAALSVVFQEGPRRVVVAVPVASPEAVERLK  167 (208)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCTTSEEEEECSCBSSCHHHHHHHHHHHTTCCSEEEEEEEEBCHHHHHHHH
T ss_pred             chhhhhHHHHHHHHHHhhcceeeccCCCcccCCCEEEEEcchhhhhHHHHHHHHHHHhcCCCEEEEeeccCChHHHHhhc
Confidence            00              000000 000112369999999999999999999999999999999999999888887666665

>d1j7ja_ c.61.1.1 (A:) Hypoxanthine PRTase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Hypoxanthine PRTase
species: Salmonella typhimurium [TaxId: 90371]

Probab=99.62  E-value=3.1e-15  Score=112.41  Aligned_cols=139  Identities=13%  Similarity=0.168  Sum_probs=93.1

Q ss_pred             hhcCHHHHHHHHHHHHHHHh----cC-CCcEEEEeCCCChhhHHHHHHHhCCCeEEE--eecCCCCCcccchheeeeccc
Q 029741           40 LLLDHKAFKDTVDIFVDRYR----DM-GISVVAGIEARGFVFGPSIALAIGAKFVPL--RKPNKLPGEVISEAYVLEYGT  112 (188)
Q Consensus        40 ll~~~~~~~~l~~~la~~~~----~~-~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~~--~k~~~~~~~~~~~~~~~~~~~  112 (188)
                      ++.+++.++..++.||.++.    +. +..+++|+..||+.+|..+++.++.+...-  .-.......       ...+.
T Consensus         5 ilis~~~I~~~I~rlA~~I~e~~~~~~~~~vivgIl~GG~~fa~~L~~~l~~~~~~~~~~~~~~~~~~-------~~~~~   77 (172)
T d1j7ja_           5 VMIPEAEIKARIAELGRQITERYKDSGSEMVLVGLLRGSFMFMADLCREVQVPHEVDFMTASSYGSGM-------STTRD   77 (172)
T ss_dssp             EEECHHHHHHHHHHHHHHHHHHHHTTCSCEEEEEETTTTHHHHHHHHTTCCSCCEEEEEBCC----------------CC
T ss_pred             EEcCHHHHHHHHHHHHHHHHHHhcccCCceEEEEEcCCcHHHHHHHHHHhCCcccCCeEEEEecCCCc-------cccCc
Confidence            45577777776677766663    22 456899999999999999999999886431  111100000       00011


Q ss_pred             eeEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChhhhhccCCCCeEEEEeccc-cc
Q 029741          113 DRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQRRLDGKPLYILVEPRL-SV  186 (188)
Q Consensus       113 ~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~~~~~l~~~~~~~l~~~~~-~~  186 (188)
                      ..+........+||+|||||||+.||+||..+++.|.+.|++.+.+++++.++..+ ++.-.|=+.-+++++ ||
T Consensus        78 ~~~~~~~~~~~~gk~VLlVDDVldTG~TL~~~~~~l~~~~p~~i~~avL~~k~~~r-~~pi~pDy~G~~ipd~~v  151 (172)
T d1j7ja_          78 VKILKDLDEDIRGKDVLIVEDIIDSGNTLSKVREILGLREPKSLAICTLLDKPSRR-EVDVPVEFVGFSIPDEFV  151 (172)
T ss_dssp             CCCSBCCSSCCBTSEEEEEEEEESSCHHHHHHHHHHHTTCBSEEEEEEEEECGGGC-SSCCCCSEEEEECCSCCE
T ss_pred             eeeecCCCcccCCCEEEEEeeehhHHHHHHHHHHHHHhhCCCceEEEEEEEecccc-cCCCCCCEEEEEcCCceE
Confidence            01111112346999999999999999999999999999999999999999997532 333223466677766 54

>d2c4ka2 c.61.1.2 (A:167-350) PRPP synthetase-associated protein 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosylpyrophosphate synthetase-like
domain: PRPP synthetase-associated protein 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.61  E-value=6.5e-16  Score=117.48  Aligned_cols=119  Identities=15%  Similarity=0.195  Sum_probs=82.1

Q ss_pred             cEEEEeCCCChhhHHHHHHHhCCCeEEEeecCCCCCcccchh-eee--------ecc-------ce---eEEEecCCCCC
Q 029741           64 SVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEA-YVL--------EYG-------TD---RLEMHVGAIEP  124 (188)
Q Consensus        64 d~Iv~v~~gG~~~a~~lA~~l~~p~~~~~k~~~~~~~~~~~~-~~~--------~~~-------~~---~~~l~~~~~~~  124 (188)
                      -+|++|+.||...|..+|+.||+|+.++.|++.......... ...        ...       .+   .+.+ .++ ++
T Consensus         5 ~VVvsPd~Ggv~ra~~~A~~L~~~~a~i~k~r~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~v-iGd-Vk   82 (184)
T d2c4ka2           5 AVIVAKSPDAAKRAQSYAERLRLGLAVIHGEAQCTELDMDDGRHSPPMVKNATVHPGLELPLMMAKEKPPITV-VGD-VG   82 (184)
T ss_dssp             CEEEESSGGGHHHHHHHHHHHTCEEEEEC---------------------------------------CCCCE-ESC-CT
T ss_pred             CEEEEECcchHHHHHHHHHHhCCCEEEEEeeeccccccccccccCCccccccccccccccccccccceeeeEE-EEe-cc
Confidence            489999999999999999999999988765542211000000 000        000       00   0001 122 59


Q ss_pred             CCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChh--hhhccCCCCeEEEEeccc
Q 029741          125 GERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLDGKPLYILVEPRL  184 (188)
Q Consensus       125 Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~--~~~~l~~~~~~~l~~~~~  184 (188)
                      ||+|+||||+++||+|+..+++.|++.||+.|.+++.|....  +.++|...++..++..+.
T Consensus        83 Gk~vIIVDD~I~TG~T~~~a~~~Lk~~GA~~v~~~~tH~~~~~~a~~~l~~~~i~~i~~tnt  144 (184)
T d2c4ka2          83 GRIAIIVDDIIDDVESFVAAAEILKERGAYKIYVMATHGILSAEAPRLIEESSVDEVVVTNT  144 (184)
T ss_dssp             TEEEEEECSEESSTHHHHHHHHHHHTTTEEEEEEEEEEECCCTTHHHHHHHSSCCEEEEEBT
T ss_pred             CCEEEEecchhcchHHHHHHHHHHHhcccccceEEEEeeccCchHHHHhhcCCccEEEEecC
Confidence            999999999999999999999999999999999999999754  666777667777776654

>d1pzma_ c.61.1.1 (A:) Hypoxanthine-guanine-xanthine PRTase {Leishmania tarentolae [TaxId: 5689]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Hypoxanthine-guanine-xanthine PRTase
species: Leishmania tarentolae [TaxId: 5689]

Probab=99.60  E-value=2.8e-15  Score=113.81  Aligned_cols=137  Identities=12%  Similarity=0.154  Sum_probs=90.5

Q ss_pred             hhcCHHHHHHHHHHHHHHHhc---------CCCcEEEEeCCCChhhHHHHHHHhC---CCeEE--EeecCCCCCcccchh
Q 029741           40 LLLDHKAFKDTVDIFVDRYRD---------MGISVVAGIEARGFVFGPSIALAIG---AKFVP--LRKPNKLPGEVISEA  105 (188)
Q Consensus        40 ll~~~~~~~~l~~~la~~~~~---------~~~d~Iv~v~~gG~~~a~~lA~~l~---~p~~~--~~k~~~~~~~~~~~~  105 (188)
                      .+.+.+.+...++.||.++..         .++.+++|+..||+.+|..|+..|+   .|...  ++-.....+      
T Consensus         7 ~l~t~e~I~~~i~~lA~qI~~~y~~~~~~~~~piviigIl~Gg~~fa~~L~~~L~~~~~~~~i~~i~~~sy~~~------   80 (183)
T d1pzma_           7 TLVTQEQVWAATAKCAKKIAADYKDFHLTADNPLYLLCVLKGSFIFTADLARFLADEGVPVKVEFICASSYGSG------   80 (183)
T ss_dssp             EEECHHHHHHHHHHHHHHHHHHHGGGTCBTTBCEEEEEETTTTHHHHHHHHHHHHHTTCCEEEEEEBCC-----------
T ss_pred             eEcCHHHHHHHHHHHHHHHHHHhhhhcccCCCCeEEEEEcCCccHHHHHHHHhccccCCceeEEEEEEeecccc------
Confidence            455777776666666666643         1456799999999999999999985   44321  221111000      


Q ss_pred             eeeeccceeEEE--ecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChhhhhccCCCCeEEEEecc
Q 029741          106 YVLEYGTDRLEM--HVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQRRLDGKPLYILVEPR  183 (188)
Q Consensus       106 ~~~~~~~~~~~l--~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~~~~~l~~~~~~~l~~~~  183 (188)
                         ........+  ......+||+|||||||++||.||..+++.|++.|++.+.+++++.++..+ ++.-.+=+.-++++
T Consensus        81 ---~~~~~~~~~~~~~~~~~~gk~VLlVDDI~DTG~Tl~~~~~~l~~~~p~~v~~avL~~K~~~r-~~~i~~Dy~G~~ip  156 (183)
T d1pzma_          81 ---VETSGQVRMLLDVRDSVENRHIMLVEDIVDSAITLQYLMRFMLAKKPASLKTVVLLDKPSGR-KVDVLVDYPVITIP  156 (183)
T ss_dssp             -----------CCBCCSSCCTTCEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGGGC-SSCCCCSEEEEECC
T ss_pred             ---cccCCceeecccCcchhccccEEEEeeeecccHHHHHHHHHHHhhCCcceeEEEEEEecccc-cCCCCCCEEEEECC
Confidence               001111111  112346899999999999999999999999999999999999999987533 33322345666776


Q ss_pred             c-cc
Q 029741          184 L-SV  186 (188)
Q Consensus       184 ~-~~  186 (188)
                      + ||
T Consensus       157 d~~v  160 (183)
T d1pzma_         157 RAFV  160 (183)
T ss_dssp             SCCE
T ss_pred             CceE
Confidence            5 54

>d1z7ga1 c.61.1.1 (A:4-217) Hypoxanthine-guanine PRTase (HGPRTase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Hypoxanthine-guanine PRTase (HGPRTase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=1.5e-14  Score=112.23  Aligned_cols=141  Identities=15%  Similarity=0.194  Sum_probs=93.2

Q ss_pred             EechhhhcCHHHHHHHHHHHHHHHhc---CCCcEEEEeCCCChhhHHHHHHHh---------CCCeEE--EeecCCCCCc
Q 029741           35 QDITTLLLDHKAFKDTVDIFVDRYRD---MGISVVAGIEARGFVFGPSIALAI---------GAKFVP--LRKPNKLPGE  100 (188)
Q Consensus        35 ~d~~~ll~~~~~~~~l~~~la~~~~~---~~~d~Iv~v~~gG~~~a~~lA~~l---------~~p~~~--~~k~~~~~~~  100 (188)
                      .|+..++.+.+.+...++.||.++..   .+..+++|+..||+.+|..|++.|         ..|+..  ++-... .+.
T Consensus        26 ~~~~~ilis~~~I~~~I~rLA~qI~~~y~~k~~vlVgIl~Gg~~Fa~dL~~~L~~~~~~~~~~~~~~i~~~~~~sy-~~~  104 (214)
T d1z7ga1          26 EDLERVFIPHGLIMDRTERLARDVMKEMGGHHIVALCVLKGGYKFFADLLDYIKALNRNSDRSIPMTVDFIRLKSY-CND  104 (214)
T ss_dssp             TTEEEEEECHHHHHHHHHHHHHHHHHHHTTSCEEEEEECSSCCHHHHHHHHHHHHHHTTCSSCCCEEEEEECBC------
T ss_pred             ccccEEecCHHHHHHHHHHHHHHHHHHcCCCCeEEEEEECCcEehHHHHHHHHHHhcccCCcccceeeeeeeeeec-CCc
Confidence            35778888999888888888877742   256699999999999999999999         445432  111110 000


Q ss_pred             ccchheeeeccceeEEE-ecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChhhhhccCCCCeEEE
Q 029741          101 VISEAYVLEYGTDRLEM-HVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQRRLDGKPLYIL  179 (188)
Q Consensus       101 ~~~~~~~~~~~~~~~~l-~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~~~~~l~~~~~~~l  179 (188)
                      .       ..+...... ......+||+|||||||+.||.||.++++.|++.|++.+.++++..++..+ +..-.+=+.-
T Consensus       105 ~-------~~~~~~~~~~~~~~~i~gk~VLiVDDIlDTG~TL~~~~~~l~~~gp~sv~~avLldK~~~r-~~~i~~Dy~G  176 (214)
T d1z7ga1         105 Q-------STGDIKVIGGDDLSTLTGKNVLIVEDIIDTGKTMQTLLSLVRQYNPKMVKVASLLVKRTPR-SVGYKPDFVG  176 (214)
T ss_dssp             ------------CCBCCSSCGGGGTTSEEEEEEEECCCHHHHHHHHHHHHTTCCSEEEEEEEEEECC------CCCSEEE
T ss_pred             c-------cccccceeccCChHhhhhceEEEecchhhHHHHHHHHHHHHHhhCCCeEEEEEEEEccccc-cCCCCCcEEE
Confidence            0       000000000 011235999999999999999999999999999999999999999976432 2321223444


Q ss_pred             Eeccc
Q 029741          180 VEPRL  184 (188)
Q Consensus       180 ~~~~~  184 (188)
                      +++++
T Consensus       177 f~i~d  181 (214)
T d1z7ga1         177 FEIPD  181 (214)
T ss_dssp             EEECS
T ss_pred             EECCC
Confidence            55544

>d1ufra_ c.61.1.1 (A:) Pyrimidine operon regulator PyrR {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Pyrimidine operon regulator PyrR
species: Thermus thermophilus [TaxId: 274]

Probab=99.52  E-value=1.8e-13  Score=103.17  Aligned_cols=119  Identities=20%  Similarity=0.215  Sum_probs=79.8

Q ss_pred             hcCHHHHHHHHHHHHHHH----hcCCCcEEEEeCCCChhhHHHHHHHhC------CCeEEEeecCCCCCcccchheeeec
Q 029741           41 LLDHKAFKDTVDIFVDRY----RDMGISVVAGIEARGFVFGPSIALAIG------AKFVPLRKPNKLPGEVISEAYVLEY  110 (188)
Q Consensus        41 l~~~~~~~~l~~~la~~~----~~~~~d~Iv~v~~gG~~~a~~lA~~l~------~p~~~~~k~~~~~~~~~~~~~~~~~  110 (188)
                      +.+.+.++..++.||.++    .+.++.+++|+..||+.+|..+.+.++      +|+..+.-... ..      +....
T Consensus         7 l~s~~eI~~~I~rlA~qI~e~~~~~~~~vligI~~gg~~fa~~L~~~l~~~~~~~~~~~~~~~~~~-~~------~~~~~   79 (178)
T d1ufra_           7 LMNAPEMRRALYRIAHEIVEANKGTEGLALVGIHTRGIPLAHRIARFIAEFEGKEVPVGVLDITLY-RD------DLTEI   79 (178)
T ss_dssp             EEEHHHHHHHHHHHHHHHHHHHTSSTTEEEEEETTTHHHHHHHHHHHHHHHHCSCCCEEEEEEEC---------------
T ss_pred             ECCHHHHHHHHHHHHHHHHHHcCCCCceEEEEeccchHHHHHHHHHhhhhhcCCCcceEEEEeEEe-cc------ccccC
Confidence            346666665555565554    344677899999999999999999873      34333221110 00      00011


Q ss_pred             cceeE--EEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcC-CeEEEEEEEeeChh
Q 029741          111 GTDRL--EMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMG-AEVVECACVVGLPE  166 (188)
Q Consensus       111 ~~~~~--~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~G-a~~v~v~~l~~~~~  166 (188)
                      +....  ........+||+|||||||++||.||.++++.|.+.| ++.+.+++|++++.
T Consensus        80 ~~~~~~~~~~~~~~i~gk~VLiVDDIlDTG~TL~~~~~~l~~~g~~~~i~~avL~dk~~  138 (178)
T d1ufra_          80 GYRPQVRETRIPFDLTGKAIVLVDDVLYTGRTARAALDALIDLGRPRRIYLAVLVDRGH  138 (178)
T ss_dssp             ---CEEEEEEECSCCTTCEEEEEEEEESSSHHHHHHHHHHHHHCCCSEEEEEEEEECCC
T ss_pred             CcceEEecccCccccCCCeEEEEEcccCcchHHHHHHHHHhhhCCCcEEEEEEEEcCCc
Confidence            11111  1112334699999999999999999999999999998 88999999999863

>d1cjba_ c.61.1.1 (A:) Hypoxanthine-guanine PRTase (HGPRTase) {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Hypoxanthine-guanine PRTase (HGPRTase)
species: Plasmodium falciparum [TaxId: 5833]

Probab=99.52  E-value=8.5e-15  Score=114.68  Aligned_cols=151  Identities=13%  Similarity=0.081  Sum_probs=97.7

Q ss_pred             eEEechhhhcCHHHHHHHHHHHHHHHhc---CCCcEEEEeCCCChhhHHHHHHHhCCCeEEEeecCC-CCCc--ccch-h
Q 029741           33 MFQDITTLLLDHKAFKDTVDIFVDRYRD---MGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNK-LPGE--VISE-A  105 (188)
Q Consensus        33 ~~~d~~~ll~~~~~~~~l~~~la~~~~~---~~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~~~k~~~-~~~~--~~~~-~  105 (188)
                      ...|+..++.+.+.++.-++.||.++.+   .+..+++|+..||+.+|+.|++.|+.+......... ..+.  +... .
T Consensus        35 y~~~~~~Vli~~~~I~~rI~rLA~eI~~~y~~~~~vivgIL~Gg~~Fa~dL~r~L~~~~~~~~~~~s~y~~~~~~~~~~~  114 (228)
T d1cjba_          35 YKKYLTKVLVPNGVIKNRIEKLAYDIKKVYNNEEFHILCLLKGSRGFFTALLKHLSRIHNYSAVETSKPLFGEHYVRVKS  114 (228)
T ss_dssp             TGGGEEEEEECHHHHHHHHHHHHHHHHHHHTTCCEEEEEEETTTHHHHHHHHHHHHHHHHHHCCTTCCCCEEEEEEEEEE
T ss_pred             hhccccEEecCHHHHHHHHHHHHHHHHHHcCCCCeEEEEEccCCHHHHHHHHHHhccccccceeeeecccCceEEEEEEe
Confidence            4456888899998888777777777752   255689999999999999999999754321000000 0000  0000 0


Q ss_pred             eeeeccceeEEEe--cCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChhhhhccCCCCeEEEEecc
Q 029741          106 YVLEYGTDRLEMH--VGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQRRLDGKPLYILVEPR  183 (188)
Q Consensus       106 ~~~~~~~~~~~l~--~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~~~~~l~~~~~~~l~~~~  183 (188)
                      +............  .....+||+|||||||++||.||.++++.|++.|++.+.+++++.++..+ +..-.+=+.-++++
T Consensus       115 ~~~~~~~~~~~~~~~~~~~i~gk~VLlVDDIlDTG~TL~~~~~~L~~~gp~sv~~avLldK~~~r-~~~i~~DyvGfeip  193 (228)
T d1cjba_         115 YCNDQSTGTLEIVSEDLSCLKGKHVLIVEDIIDTGKTLVKFCEYLKKFEIKTVAIACLFIKRTPL-WNGFKADFVGFSIP  193 (228)
T ss_dssp             EETTEEEEEEEEEESCGGGGBTCEEEEEEEEESSSHHHHHHHHHHGGGCBSEEEEEEEEEECCTT-CCCCBCSEEEEEEC
T ss_pred             ecCccccccceeecCChhhhCCceeEEecchhhHHHHHHHHHHHHHhhCcceeEEEEeeeecccc-cCCCCCCEEEEEcC
Confidence            0000011112211  12236899999999999999999999999999999999999999876432 23222335555666


Q ss_pred             c
Q 029741          184 L  184 (188)
Q Consensus       184 ~  184 (188)
                      +
T Consensus       194 d  194 (228)
T d1cjba_         194 D  194 (228)
T ss_dssp             S
T ss_pred             C
Confidence            5

>d1fsga_ c.61.1.1 (A:) Hypoxanthine-guanine-xanthine PRTase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Hypoxanthine-guanine-xanthine PRTase
species: Toxoplasma gondii [TaxId: 5811]

Probab=99.50  E-value=3.6e-14  Score=111.38  Aligned_cols=141  Identities=18%  Similarity=0.101  Sum_probs=94.5

Q ss_pred             eEEechhhhcCHHHHHHHHHHHHHHHhcC---CCcEEEEeCCCChhhHHHHHHHhCC-----------Ce-E--EEeecC
Q 029741           33 MFQDITTLLLDHKAFKDTVDIFVDRYRDM---GISVVAGIEARGFVFGPSIALAIGA-----------KF-V--PLRKPN   95 (188)
Q Consensus        33 ~~~d~~~ll~~~~~~~~l~~~la~~~~~~---~~d~Iv~v~~gG~~~a~~lA~~l~~-----------p~-~--~~~k~~   95 (188)
                      ...|+.+++.+.+.++.-.+.||.++.+.   +..+++|+..||+.+|..|++.|..           +. .  +.+...
T Consensus        41 ~~~~i~~Ili~~~~I~~rI~rLA~eI~e~~~~k~~vlIgIl~Gg~~fa~~L~~~L~~~~~~~~~~~~i~~~~~~~~~~s~  120 (233)
T d1fsga_          41 CKPYIDKILLPGGLVKDRVEKLAYDIHRTYFGEELHIICILKGSRGFFNLLIDYLATIQKYSGRESSVPPFFEHYVRLKS  120 (233)
T ss_dssp             TTTTCCEEEECHHHHHHHHHHHHHHHHHHHTTSCEEEEEEETTTHHHHHHHHHHHHHHHHHCSSCCSSCSCEEEEEEEEE
T ss_pred             cccchhEEecCHHHHHHHHHHHHHHHHHHcCCCCeEEEEEecCCHHHHHHHHHHHHHhhcccccccccCcceeEEEEeec
Confidence            33457788888888887777777766432   4558999999999999999999852           11 1  011000


Q ss_pred             CCCCcccchheeeeccceeEEEe--cCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChhhhhccCC
Q 029741           96 KLPGEVISEAYVLEYGTDRLEMH--VGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQRRLDG  173 (188)
Q Consensus        96 ~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~~~~~l~~  173 (188)
                                +............  .....+||+|||||||+.||+||.++++.|++.|++.+.+++++.++.. .++.-
T Consensus       121 ----------~~~~~~~~~~~~~~~~~~~i~gk~VLlVDDIlDTG~TL~~~~~~L~~~gp~sv~~avLldK~~~-r~~pi  189 (233)
T d1fsga_         121 ----------YQNDNSTGQLTVLSDDLSIFRDKHVLIVEDIVDTGFTLTEFGERLKAVGPKSMRIATLVEKRTD-RSNSL  189 (233)
T ss_dssp             ----------EETTEEEEEEEEECSCGGGGTTCEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEEEECCT-TCCSC
T ss_pred             ----------cCCccccccccccccChhhhcCceEEEeechhhHHHHHHHHHHHHHhhCcccccEEEEEEcCcc-CcCCC
Confidence                      0000111112221  1233689999999999999999999999999999999999999998743 23321


Q ss_pred             CCeEEEEeccc
Q 029741          174 KPLYILVEPRL  184 (188)
Q Consensus       174 ~~~~~l~~~~~  184 (188)
                      .+=+.-+++++
T Consensus       190 ~~DyvGfeipd  200 (233)
T d1fsga_         190 KGDFVGFSIED  200 (233)
T ss_dssp             BCSEEEEEECS
T ss_pred             CCCEEEEECCC
Confidence            12234555554

>d1a3ca_ c.61.1.1 (A:) Pyrimidine operon regulator PyrR {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Pyrimidine operon regulator PyrR
species: Bacillus subtilis [TaxId: 1423]

Probab=99.46  E-value=6.1e-13  Score=100.22  Aligned_cols=123  Identities=16%  Similarity=0.258  Sum_probs=81.2

Q ss_pred             hhhcCHHHHHHHHHHHHHHHh----cCCCcEEEEeCCCChhhHHHHHHHhC----CCeE--EEeecCCCCCcccchheee
Q 029741           39 TLLLDHKAFKDTVDIFVDRYR----DMGISVVAGIEARGFVFGPSIALAIG----AKFV--PLRKPNKLPGEVISEAYVL  108 (188)
Q Consensus        39 ~ll~~~~~~~~l~~~la~~~~----~~~~d~Iv~v~~gG~~~a~~lA~~l~----~p~~--~~~k~~~~~~~~~~~~~~~  108 (188)
                      +++.+.+.++..++.||.++.    +.++.+++|+..||+.+|..|++.+.    .|+.  .+.-... ....    +..
T Consensus         3 ~il~~~~~I~~~i~rlA~qI~e~~~~~~~~vligvl~Gg~~f~~~L~~~L~~~~~~~~~~~~i~~~~~-~~~~----~~~   77 (178)
T d1a3ca_           3 AVILDEQAIRRALTRIAHEMIERNKGMNNCILVGIKTRGIYLAKRLAERIEQIEGNPVTVGEIDITLY-RDDL----SKK   77 (178)
T ss_dssp             EEEECHHHHHHHHHHHHHHHHHHCC----CEEEEESHHHHHHHHHHHHHHHHHHSSCCEEEEEEEECC-C----------
T ss_pred             EEEeCHHHHHHHHHHHHHHHHHhcCCCCCeEEEEecCccchHHHHHHHhhhhhcccceeeEeeeeeee-eccc----ccc
Confidence            356677777777777777664    23567889999999999999999984    4432  2211110 0000    000


Q ss_pred             eccceeEEE--ecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHc-CCeEEEEEEEeeChh
Q 029741          109 EYGTDRLEM--HVGAIEPGERALVIDDLVATGGTLSAAVRLLERM-GAEVVECACVVGLPE  166 (188)
Q Consensus       109 ~~~~~~~~l--~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~-Ga~~v~v~~l~~~~~  166 (188)
                      ..+...+..  ..+...+||+|||||||++||.||.++++.|.+. +++.+.++++.+++.
T Consensus        78 ~~~~~~~~~~~~~~~~l~gk~VLIVDDIlDTG~TL~~~~~~l~~~~~p~~v~~avL~dk~~  138 (178)
T d1a3ca_          78 TSNDEPLVKGADIPVDITDQKVILVDDVLYTGRTVRAGMDALVDVGRPSSIQLAVLVDRGH  138 (178)
T ss_dssp             --CCCCEEEEEECSSCCTTSEEEEEEEEESSSHHHHHHHHHHHHHCCCSEEEEEEEEECCC
T ss_pred             ccCCccEEecccCcccccCCEEEEEeeeeccCcHHHHHHHHHHhcCCCcEEEEEEEEcCCC
Confidence            011111111  2233469999999999999999999999999875 589999999999863

>d1gph11 c.61.1.1 (1:235-465) Glutamine PRPP amidotransferase, C-terminal domain {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Glutamine PRPP amidotransferase, C-terminal domain
species: Bacillus subtilis [TaxId: 1423]

Probab=99.45  E-value=9.7e-14  Score=108.06  Aligned_cols=118  Identities=21%  Similarity=0.244  Sum_probs=88.1

Q ss_pred             HHHHHHHHHHHHHHHhcCCCcEEEEeCCCChhhHHHHHHHhCCCeEE-EeecCCCCCcccchheeeecc--ceeEEEecC
Q 029741           44 HKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVP-LRKPNKLPGEVISEAYVLEYG--TDRLEMHVG  120 (188)
Q Consensus        44 ~~~~~~l~~~la~~~~~~~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~-~~k~~~~~~~~~~~~~~~~~~--~~~~~l~~~  120 (188)
                      .+....+++.|++... .+.|+|+++|.+|.+.|...|..+|+|+.. +.|++....+++..+...+..  ...+... .
T Consensus        22 y~~R~~lG~~La~~~~-~~~diV~~vPds~~~~a~g~a~~~~ip~~~~~ikn~~~~RtFI~p~~~~R~~~v~~K~~~~-~   99 (231)
T d1gph11          22 HSARKNLGKMLAQESA-VEADVVTGVPDSSISAAIGYAEATGIPYELGLIKNRYVGRTFIQPSQALREQGVRMKLSAV-R   99 (231)
T ss_dssp             HHHHHHHHHHHHHHCC-CCCSEEECCTTTTHHHHHHHHHHHTCCBCCCEEECTTCSTTCCCCCHHHHHHTCCCSEEEC-H
T ss_pred             HHHHHHHHHHHhhhCC-CCCcEEEecCCcchhHHHHHHHHhCCchhhcceehhhhhhccCCCchHHHHHHHHHhhhhh-h
Confidence            4566789999987653 478999999999999999999999999854 455555544444332221111  1123222 2


Q ss_pred             CCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEee
Q 029741          121 AIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVG  163 (188)
Q Consensus       121 ~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~  163 (188)
                      ...+||+|+||||.+-.|+|+..++++|+++||++|.+.+.+.
T Consensus       100 ~~i~gK~vvlVDDSIVRGtT~k~iv~~lr~aGakeVh~~i~sP  142 (231)
T d1gph11         100 GVVEGKRVVMVDDSIVRGTTSRRIVTMLREAGATEVHVKISSP  142 (231)
T ss_dssp             HHHTTCEEEEEESCCSSSHHHHHHHHHHHHTTCSEEEEEESSC
T ss_pred             heeccCceEEeehhhhccchHHHHHHHHHHcCCCeEEEEeccc
Confidence            3469999999999999999999999999999999998876543

>d1ecfa1 c.61.1.1 (A:250-492) Glutamine PRPP amidotransferase, C-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Glutamine PRPP amidotransferase, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=99.43  E-value=3.4e-13  Score=105.84  Aligned_cols=118  Identities=19%  Similarity=0.200  Sum_probs=84.9

Q ss_pred             HHHHHHHHHHHHHH----hcCCCcEEEEeCCCChhhHHHHHHHhCCCeEE-EeecCCCCCcccchheeeecc--ceeEEE
Q 029741           45 KAFKDTVDIFVDRY----RDMGISVVAGIEARGFVFGPSIALAIGAKFVP-LRKPNKLPGEVISEAYVLEYG--TDRLEM  117 (188)
Q Consensus        45 ~~~~~l~~~la~~~----~~~~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~-~~k~~~~~~~~~~~~~~~~~~--~~~~~l  117 (188)
                      +....++..|++.+    .+.+.|+|+++|..|.+.|...|..+|+|+.. +.|++....+++..+...+..  ...+..
T Consensus        24 ~~R~~lG~~La~~~~~~~~~~~~dvV~~vP~s~~~~a~g~a~~l~~p~~~~~ikn~~~~RtfI~p~~~~R~~~v~~K~~~  103 (243)
T d1ecfa1          24 SARVNMGTKLGEKIAREWEDLDIDVVIPIPETSCDIALEIARILGKPYRQGFVKNRYVGRTFIMPGQQLRRKSVRRKLNA  103 (243)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTCCCCEEEECTTTTHHHHHHHHHHHTCCBCCCEEECSCCCCCCCCSSSCCCCCCSTTTEEE
T ss_pred             HHHHHHHHHHHHHHHHhcCCCCccEEecccccchhhhHHHHHHcCChhhhhhhhcccchhhhhCCcHHHHHHHHhhcccc
Confidence            44556666666554    44578999999999999999999999999854 334444444444332222211  123333


Q ss_pred             ecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEee
Q 029741          118 HVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVG  163 (188)
Q Consensus       118 ~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~  163 (188)
                      . ....+||+|+||||.+-.|+|+..+++.|+++||++|.+.+.+.
T Consensus       104 ~-~~~i~gk~vvlVDDSIVRGtT~k~iv~~L~~~gakeih~~i~sP  148 (243)
T d1ecfa1         104 N-RAEFRDKNVLLVDDSIVRGTTSEQIIEMAREAGAKKVYLASAAP  148 (243)
T ss_dssp             C-GGGTTTCCEEEEESCCSSSHHHHHHHHHHHHTTCSSEEEEESSC
T ss_pred             c-hheeccceEEEEhhHHHhhhhHHHHHHHHHHcCCCeEEEEeccc
Confidence            3 23469999999999999999999999999999999988776543

>d1w30a_ c.61.1.1 (A:) Pyrimidine operon regulator PyrR {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Pyrimidine operon regulator PyrR
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.42  E-value=1.8e-12  Score=97.99  Aligned_cols=118  Identities=18%  Similarity=0.219  Sum_probs=78.1

Q ss_pred             hcCHHHHHHHHHHHHHHHhc-----------CCCcEEEEeCCCChhhHHHHHHHh----CCCeEE--EeecCCCCCcccc
Q 029741           41 LLDHKAFKDTVDIFVDRYRD-----------MGISVVAGIEARGFVFGPSIALAI----GAKFVP--LRKPNKLPGEVIS  103 (188)
Q Consensus        41 l~~~~~~~~l~~~la~~~~~-----------~~~d~Iv~v~~gG~~~a~~lA~~l----~~p~~~--~~k~~~~~~~~~~  103 (188)
                      +.+.+.+....+.||.++.+           .+..+++|+..||+.+|..++..|    +.++..  +.-..      ++
T Consensus         5 l~s~~~I~~~I~rlA~qI~E~~~~~~~~~~~~~~~vliGIl~Gg~~fa~~L~~~L~~~~~~~~~~~~i~~~~------y~   78 (182)
T d1w30a_           5 LMSAANVGRTISRIAHQIIEKTALDDPVGPDAPRVVLLGIPTRGVTLANRLAGNITEYSGIHVGHGALDITL------YR   78 (182)
T ss_dssp             EECHHHHHHHHHHHHHHHHHHTTTTSCCBTTBCCEEEEECTTHHHHHHHHHHHHHHHHHSCCCEEEECCCGG------GC
T ss_pred             cCCHHHHHHHHHHHHHHHHHhcccccccccCCCcEEEEEeccchHHHHHHHHHHHHhhccceeeEEEEeeee------ec
Confidence            34666666666777766621           134489999999999999999988    454322  21110      00


Q ss_pred             hheeeeccceeEEE--ecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcC-CeEEEEEEEeeCh
Q 029741          104 EAYVLEYGTDRLEM--HVGAIEPGERALVIDDLVATGGTLSAAVRLLERMG-AEVVECACVVGLP  165 (188)
Q Consensus       104 ~~~~~~~~~~~~~l--~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~G-a~~v~v~~l~~~~  165 (188)
                      . .....+......  ......+||+|||||||++||.||.++++.|.+.| ++.+.+++|++++
T Consensus        79 ~-~~~~~~~~~~~~~~~~~~~l~gk~VLlVDDIlDTG~TL~~~~~~l~~~g~~~~v~~avLvdk~  142 (182)
T d1w30a_          79 D-DLMIKPPRPLASTSIPAGGIDDALVILVDDVLYSGRSVRSALDALRDVGRPRAVQLAVLVDRG  142 (182)
T ss_dssp             C---------CCCCCBCCTTCSTTCEEEEEEEEESSSHHHHHHHHHHHHHCCCSEEEEEEEEECC
T ss_pred             c-ccccccccccccccccccccCCcEEEEEecccccCchHHHHHHHHHhcCCCCEEEEEEEEcCC
Confidence            0 000001111100  11224689999999999999999999999999998 6889999999985

>d1dqna_ c.61.1.1 (A:) Guanine PRTase {Giardia lamblia [TaxId: 5741]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Guanine PRTase
species: Giardia lamblia [TaxId: 5741]

Probab=99.37  E-value=3.8e-14  Score=110.52  Aligned_cols=112  Identities=10%  Similarity=0.120  Sum_probs=81.6

Q ss_pred             hhcCHHHHHHHHHHHHHHHhc-----CCCcEEEEeCCCChhhHHHHHHHhCCCeEE--EeecCCCCCcccchheeeeccc
Q 029741           40 LLLDHKAFKDTVDIFVDRYRD-----MGISVVAGIEARGFVFGPSIALAIGAKFVP--LRKPNKLPGEVISEAYVLEYGT  112 (188)
Q Consensus        40 ll~~~~~~~~l~~~la~~~~~-----~~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~--~~k~~~~~~~~~~~~~~~~~~~  112 (188)
                      ++.+++.++..++.+|+++.+     .++.+++|+..||+.++..|+..++.|+..  ++-..          |....+.
T Consensus        34 il~t~eeI~~~i~~lA~~I~e~Yk~~~~~~viI~VLkGg~~FaadL~r~L~~~~~idfi~vsS----------Y~g~~~~  103 (230)
T d1dqna_          34 LLATFEECKALAADTARRMNEYYKDVAEPVTLVALLTGAYLYASLLTVHLTFPYTLHFVKVSS----------YKGTRQE  103 (230)
T ss_dssp             EEECHHHHHHHHHHHHHHHHHHHTTCSSCEEEEEETTTHHHHHHHHHTTCCSCEEEEEECCEE----------EECSSCE
T ss_pred             EEecHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEccCcHHHHHHHHHhcCCCceEEEEEEEE----------cCCCccc
Confidence            667888888888888877753     255689999999999999999999998743  32111          2111111


Q ss_pred             eeEEEec--CCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEE
Q 029741          113 DRLEMHV--GAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACV  161 (188)
Q Consensus       113 ~~~~l~~--~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l  161 (188)
                      ....+..  ....+||+|||||||++||.||..+.+.|++.|++.+.++++
T Consensus       104 ~~~~i~~~~~~~i~gk~VLIVDDIvDTG~TL~~l~~~L~~~~~~Sv~i~~l  154 (230)
T d1dqna_         104 SVVFDEEDLKQLKEKREVVLIDEYVDSGHTIFSIQEQIKHAKICSCFVKDV  154 (230)
T ss_dssp             EEECCHHHHHHHHHCSSEEEEEEEESSSHHHHHHHHHSTTCEEEEEEESCH
T ss_pred             CccceecccccccCCCceEEEehhhhhhHHHHHHHHHHhhcCCceEEEEEe
Confidence            1222111  123479999999999999999999999999999988876655

>d1o5oa_ c.61.1.1 (A:) Uracil PRTase, Upp {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Uracil PRTase, Upp
species: Thermotoga maritima [TaxId: 2336]

Probab=98.49  E-value=1.9e-06  Score=65.54  Aligned_cols=138  Identities=15%  Similarity=0.205  Sum_probs=90.7

Q ss_pred             CCChhHHHHhhcccccCCCCCCCceEEechhhhcCHHHHHHHHHHHHHH----Hh------------------cCCCcEE
Q 029741            9 RGDPRLQGISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDR----YR------------------DMGISVV   66 (188)
Q Consensus         9 ~~~~~~~~~~~~~r~~~~~~~~g~~~~d~~~ll~~~~~~~~l~~~la~~----~~------------------~~~~d~I   66 (188)
                      -.||++++.=..+|+... +  ...|         ....+.++..|+..    +.                  ..+.-++
T Consensus         8 ~~hPlv~~~Lt~LRd~~T-~--~~~F---------r~~~~rl~~lL~~ea~~~l~~~~~~v~TP~g~~~~~~~~~~~i~~   75 (210)
T d1o5oa_           8 VDHPLIKHKLTIMRDKNT-G--PKEF---------RELLREITLLLAYEATRHLKCEEVEVETPITKTIGYRINDKDIVV   75 (210)
T ss_dssp             CCCHHHHHHHHHHHSTTC-C--HHHH---------HHHHHHHHHHHHHHHTTTCCCEEEEEECSSCEEEEEECCSTTEEE
T ss_pred             cCCHHHHHHHHHHHCCCC-C--hHHH---------HHHHHHHHHHHHHHHHhhCccccEEecCCCcceEEEEecCCceEE
Confidence            368999998888888755 1  1111         11223444444433    21                  1122478


Q ss_pred             EEeCCCChhhHHHHHHHhC-CCeEE--EeecCCCCCcccchheeeeccceeE-EEecCCCCCCCEEEEEcCcccchHHHH
Q 029741           67 AGIEARGFVFGPSIALAIG-AKFVP--LRKPNKLPGEVISEAYVLEYGTDRL-EMHVGAIEPGERALVIDDLVATGGTLS  142 (188)
Q Consensus        67 v~v~~gG~~~a~~lA~~l~-~p~~~--~~k~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~Gk~VLIVDDvi~TG~Tl~  142 (188)
                      |++.++|..+...+.+.+- .+...  +.+..+..             +... +...+....++.|+|+|.++.||+|+.
T Consensus        76 V~ILRAGl~m~~g~~~~~p~a~vg~i~~~r~~~t~-------------~p~~yy~~lP~~i~~~~vil~DPmlATG~s~~  142 (210)
T d1o5oa_          76 VPILRAGLVMADGILELLPNASVGHIGIYRDPETL-------------QAVEYYAKLPPLNDDKEVFLLDPMLATGVSSI  142 (210)
T ss_dssp             EEEETTHHHHHHHHHHHSTTCEECEEEEEECTTTC-------------CEEEEEEECCCCCTTCEEEEECSEESSSHHHH
T ss_pred             EEEeccchhHHHHHHHhCCCceeeEEEEeccCCCC-------------CceeehhhCCccccCceEEEEhHHhhcCccHH
Confidence            8899999999999888863 33322  22221110             1111 212233458899999999999999999


Q ss_pred             HHHHHHHHcCCeEEEEEEEeeChhhhhcc
Q 029741          143 AAVRLLERMGAEVVECACVVGLPEGQRRL  171 (188)
Q Consensus       143 ~~~~~L~~~Ga~~v~v~~l~~~~~~~~~l  171 (188)
                      .+++.|++.|++.+.+++++..+.+.+++
T Consensus       143 ~ai~~L~~~g~~~I~~v~~ias~~Gl~~i  171 (210)
T d1o5oa_         143 KAIEILKENGAKKITLVALIAAPEGVEAV  171 (210)
T ss_dssp             HHHHHHHHTTCCEEEEECSEECHHHHHHH
T ss_pred             HHHHHHHhCCCCcEEEEEEEEchHHHHHH
Confidence            99999999999999999999988876665

>d1i5ea_ c.61.1.1 (A:) Uracil PRTase, Upp {Bacillus caldolyticus [TaxId: 1394]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Uracil PRTase, Upp
species: Bacillus caldolyticus [TaxId: 1394]

Probab=98.48  E-value=1.8e-06  Score=65.60  Aligned_cols=96  Identities=23%  Similarity=0.316  Sum_probs=69.5

Q ss_pred             EEEEeCCCChhhHHHHHHHhC-CCeEE--EeecCCCCCcccchheeeeccceeEEEecCCCCCCCEEEEEcCcccchHHH
Q 029741           65 VVAGIEARGFVFGPSIALAIG-AKFVP--LRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTL  141 (188)
Q Consensus        65 ~Iv~v~~gG~~~a~~lA~~l~-~p~~~--~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl  141 (188)
                      ++|++.+.|..+...+...+- .+..+  +.+......            ....+...+...+++.|+|+|.++.||+|+
T Consensus        72 ~~V~ILRAGl~m~~g~~~~~p~a~vg~Ig~~Rd~~t~~------------p~~~y~klP~~i~~~~villDPmlATG~s~  139 (208)
T d1i5ea_          72 GVIPILRAGIGMVDGILKLIPAAKVGHIGLYRDPQTLK------------PVEYYVKLPSDVEERDFIIVDPMLATGGSA  139 (208)
T ss_dssp             EEEEBTTGGGGGHHHHHHHCTTSEECEEEEECCTTCSS------------CEEEEEECCTTTTTSEEEEECSEESSSHHH
T ss_pred             eEeecccchhhHHHHHHHhCCCceeeeEEEeeccCCCC------------cEEEeeecCcchhcCeEEEeChhHhcchhH
Confidence            578899999999888888763 23222  222111100            111222224456899999999999999999


Q ss_pred             HHHHHHHHHcCCeEEEEEEEeeChhhhhccC
Q 029741          142 SAAVRLLERMGAEVVECACVVGLPEGQRRLD  172 (188)
Q Consensus       142 ~~~~~~L~~~Ga~~v~v~~l~~~~~~~~~l~  172 (188)
                      ..+++.|++.|++.+.++++...+++.+++.
T Consensus       140 ~~ai~~L~~~G~~~I~~v~~iaa~~Gi~~i~  170 (208)
T d1i5ea_         140 VAAIDALKKRGAKSIKFMCLIAAPEGVKAVE  170 (208)
T ss_dssp             HHHHHHHHHTTCCCEEEECSEECHHHHHHHH
T ss_pred             HHHHHHHHhCCCCcEEEEEEeecHHHHHHHH
Confidence            9999999999999999999999988776663

>d1bd3a_ c.61.1.1 (A:) Uracil PRTase, Upp {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Uracil PRTase, Upp
species: Toxoplasma gondii [TaxId: 5811]

Probab=98.15  E-value=5.8e-06  Score=63.35  Aligned_cols=144  Identities=14%  Similarity=0.209  Sum_probs=88.4

Q ss_pred             CCCChhHHHHhhcccccCCCCCCCceEEechhhhcCHHHHHHHHHHHHHHHhc---------------C---CCcEEEEe
Q 029741            8 LRGDPRLQGISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRD---------------M---GISVVAGI   69 (188)
Q Consensus         8 ~~~~~~~~~~~~~~r~~~~~~~~g~~~~d~~~ll~~~~~~~~l~~~la~~~~~---------------~---~~d~Iv~v   69 (188)
                      +..||.++++-..+|+.-.-.   ..|   ..  .--++.+.++.+..+.+.-               .   +.-++|++
T Consensus        19 l~~~p~i~~~lTiLRd~~T~~---~~F---r~--~~~ri~~lL~yEa~~~l~~~~~~V~TPlg~~~~~~~~~~~v~~V~I   90 (224)
T d1bd3a_          19 MKQTAQLRAMMTIIRDKETPK---EEF---VF--YADRLIRLLIEEALNELPFQKKEVTTPLDVSYHGVSFYSKICGVSI   90 (224)
T ss_dssp             CCCCHHHHHHHHHHHCTTCCH---HHH---HH--HHHHHHHHHHHHHHTTSCBCCEEEECTTSCEEEECCBCCCEEEEEE
T ss_pred             eCCCHHHHHHHHHhHCCCCCh---HHH---HH--HHHHHHHHHHHHHHhccCceEEEEECCCcccccceecCCceEEEee
Confidence            456788888887777765411   111   11  0113334444444433320               0   22257888


Q ss_pred             CCCChhhHHHHHHHh-CCCeEEE--eecCCCCCcccchheeeeccceeEE-EecCCCCCCCEEEEEcCcccchHHHHHHH
Q 029741           70 EARGFVFGPSIALAI-GAKFVPL--RKPNKLPGEVISEAYVLEYGTDRLE-MHVGAIEPGERALVIDDLVATGGTLSAAV  145 (188)
Q Consensus        70 ~~gG~~~a~~lA~~l-~~p~~~~--~k~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~  145 (188)
                      .+.|..+...+-+.+ +....++  .+....             .+...+ ...+...++++|+|+|.+++||+|+..++
T Consensus        91 LRAGl~m~~g~~~~~p~a~~g~i~~~Rde~t-------------~~p~~~y~klP~~i~~~~vil~DPmLATG~S~~~ai  157 (224)
T d1bd3a_          91 VRAGESMESGLRAVCRGVRIGKILIQRDETT-------------AEPKLIYEKLPADIRERWVMLLDPMCATAGSVCKAI  157 (224)
T ss_dssp             ETGGGGGHHHHHHHSTTCCEEEEEEEECTTT-------------CCEEEEEEECCTTGGGSEEEEECSEESSCHHHHHHH
T ss_pred             ecccchhhhhHHhhCCCccceeeeeccccCC-------------CCceeeHhhCCCccccceEEEeChHHhcchHHHHHH
Confidence            999999988888776 2333332  221110             011111 12233458899999999999999999999


Q ss_pred             HHHHHcCCe--EEEEEEEeeChhhhhccC
Q 029741          146 RLLERMGAE--VVECACVVGLPEGQRRLD  172 (188)
Q Consensus       146 ~~L~~~Ga~--~v~v~~l~~~~~~~~~l~  172 (188)
                      +.|++.|++  .+.+++++..++|.+++.
T Consensus       158 ~~L~~~g~~~~~I~~v~~iaa~~Gi~~l~  186 (224)
T d1bd3a_         158 EVLLRLGVKEERIIFVNILAAPQGIERVF  186 (224)
T ss_dssp             HHHHHTTCCGGGEEEEEEEECHHHHHHHH
T ss_pred             HHHHHcCCCcceEEEEEEEecHHHHHHHH
Confidence            999999985  577778888887766664

>d1v9sa1 c.61.1.1 (A:1-208) Uracil PRTase, Upp {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Uracil PRTase, Upp
species: Thermus thermophilus [TaxId: 274]

Probab=98.11  E-value=4.5e-06  Score=63.32  Aligned_cols=98  Identities=23%  Similarity=0.316  Sum_probs=65.9

Q ss_pred             EEEEeCCCChhhHHHHHHHhC-CCeEEEeecCCCCCcccchheeeeccceeEEEecCCCCCCCEEEEEcCcccchHHHHH
Q 029741           65 VVAGIEARGFVFGPSIALAIG-AKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSA  143 (188)
Q Consensus        65 ~Iv~v~~gG~~~a~~lA~~l~-~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~  143 (188)
                      ++|++.+.|..+...+-..+- .+...+--.+.. .+         ......+...+...+++.|+|+|.++.||+|+..
T Consensus        72 ~~V~ILRAGl~m~~g~~~~~p~a~ig~i~~~r~~-~t---------~~p~~~y~klP~~i~~~~vil~DPmlATG~s~~~  141 (208)
T d1v9sa1          72 ALVAILRAGLVMVEGILKLVPHARVGHIGLYRDP-ES---------LNPVQYYIKLPPDIAERRAFLLDPMLATGGSASL  141 (208)
T ss_dssp             EEEEETTTHHHHHHHHHTTCTTCEEEEEEEC-------------------CEEEECCSCGGGSCEEEECSEESSSHHHHH
T ss_pred             EEeeeeccchhHHHHHHHHCCCcceeeEEEEecC-CC---------CCcEEEEEecCcccccceEEEeCchhhcchhHHH
Confidence            678889999888777766542 222222111100 00         0001122222334578999999999999999999


Q ss_pred             HHHHHHHcCCeEEEEEEEeeChhhhhccC
Q 029741          144 AVRLLERMGAEVVECACVVGLPEGQRRLD  172 (188)
Q Consensus       144 ~~~~L~~~Ga~~v~v~~l~~~~~~~~~l~  172 (188)
                      +++.|++.|++.+.++++...+++.+++.
T Consensus       142 ai~~L~~~gv~~I~~v~~ias~~Gi~~v~  170 (208)
T d1v9sa1         142 ALSLLKERGATGVKLMAILAAPEGLERIA  170 (208)
T ss_dssp             HHHHHHHTTCCSCEEEEEEECHHHHHHHH
T ss_pred             HHHHHHhcCCCceEEEEEEecHHHHHHHH
Confidence            99999999999999999999988776663

>d1xtta1 c.61.1.1 (A:2-216) Uracil PRTase, Upp {Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Uracil PRTase, Upp
species: Sulfolobus solfataricus [TaxId: 2287]

Probab=97.95  E-value=1.8e-05  Score=60.16  Aligned_cols=101  Identities=10%  Similarity=0.142  Sum_probs=67.0

Q ss_pred             EEEEeCCCChhhHHHHHHHhC-CCeEEE--eecCCCCCcccchheeeeccceeEEEe-cCC-CCCCCEEEEEcCcccchH
Q 029741           65 VVAGIEARGFVFGPSIALAIG-AKFVPL--RKPNKLPGEVISEAYVLEYGTDRLEMH-VGA-IEPGERALVIDDLVATGG  139 (188)
Q Consensus        65 ~Iv~v~~gG~~~a~~lA~~l~-~p~~~~--~k~~~~~~~~~~~~~~~~~~~~~~~l~-~~~-~~~Gk~VLIVDDvi~TG~  139 (188)
                      ++|++.+.|..+...+.+.+- .+.-.+  .+.. ..+....+     .-+..++.. .+. ..+.++|+|+|.++.||+
T Consensus        73 ~~V~ILRAGl~m~~g~~~~~p~a~vg~ig~~r~~-~~~~~~~~-----~~~~~~yy~klP~~~~~~~~VillDPmlATG~  146 (215)
T d1xtta1          73 VIINILRAAVPLVEGLLKAFPKARQGVIGASRVE-VDGKEVPK-----DMDVYIYYKKIPDIRAKVDNVIIADPMIATAS  146 (215)
T ss_dssp             EEEEEETTTHHHHHHHHHHCTTCEEEEEEEEECC-CCCSSCCS-----CCCEEEEEEECCCCCTTTCEEEEECSEESSSH
T ss_pred             EEeechhhcccchHHHHhhCCCCceeeeeeEecc-ccccCCCc-----ccceeeeeecCCCcccccceEEEeCchHhcch
Confidence            788889999998888888763 333222  2211 11100000     001112221 122 234568999999999999


Q ss_pred             HHHHHHHHHHHcCCeEEEEEEEeeChhhhhcc
Q 029741          140 TLSAAVRLLERMGAEVVECACVVGLPEGQRRL  171 (188)
Q Consensus       140 Tl~~~~~~L~~~Ga~~v~v~~l~~~~~~~~~l  171 (188)
                      |+..+++.|++.|++.+.+++++..+++.+++
T Consensus       147 s~~~ai~~L~~~g~~~I~~~~~ias~~Gi~~l  178 (215)
T d1xtta1         147 TMLKVLEEVVKANPKRIYIVSIISSEYGVNKI  178 (215)
T ss_dssp             HHHHHHHHHGGGCCSEEEEECSEEEHHHHHHH
T ss_pred             hHHHHHHHHhccCCCEEEEEEEEecHHHHHHH
Confidence            99999999999999999999999988876666

>d1u9ya1 c.61.1.2 (A:1-155) Phosphoribosylpyrophosphate synthetase {Methanocaldococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosylpyrophosphate synthetase-like
domain: Phosphoribosylpyrophosphate synthetase
species: Methanocaldococcus jannaschii [TaxId: 2190]

Probab=94.12  E-value=0.36  Score=33.69  Aligned_cols=78  Identities=9%  Similarity=0.084  Sum_probs=50.5

Q ss_pred             CCChhhHHHHHHHhCCCeEEEeecCCCCCcccchheeeeccceeEEEecCCCCCCCEEEEEcCcccchHHH---HHHHHH
Q 029741           71 ARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTL---SAAVRL  147 (188)
Q Consensus        71 ~gG~~~a~~lA~~l~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl---~~~~~~  147 (188)
                      .+.-.+|..+|..||.++..+..++..+++              .++......+|++|+|+=.....-.++   ..+++.
T Consensus         7 s~~~~La~~ia~~lg~~l~~~~~~~F~DGE--------------~~v~i~~~vrg~~vvvi~s~~~~~d~lmelll~~da   72 (155)
T d1u9ya1           7 SQSQNLAFKVAKLLNTKLTRVEYKRFPDNE--------------IYVRIVDEINDDEAVIINTQKNQNDAIVETILLCDA   72 (155)
T ss_dssp             TTCHHHHHHHHHHTTCCEECEEEEECTTCC--------------EEEEECSCCCSSEEEEECCCSSHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHhCCCceeeEEEEcCCCC--------------cceeeccccCCceeEEEecccccchHHHHHHHHHHH
Confidence            456789999999999998765433322222              222223446999999997543333334   345667


Q ss_pred             HHHcCCeEEEEEEEe
Q 029741          148 LERMGAEVVECACVV  162 (188)
Q Consensus       148 L~~~Ga~~v~v~~l~  162 (188)
                      ++.+||+.+.++.-.
T Consensus        73 ~~~~~a~~I~~ViPY   87 (155)
T d1u9ya1          73 LRDEGVKKITLVAPY   87 (155)
T ss_dssp             HHTTTCCEEEEECSS
T ss_pred             HHHhCCcceEEeccc
Confidence            788999987766544

>d1dkua1 c.61.1.2 (A:8-166) Phosphoribosylpyrophosphate synthetase {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosylpyrophosphate synthetase-like
domain: Phosphoribosylpyrophosphate synthetase
species: Bacillus subtilis [TaxId: 1423]

Probab=93.98  E-value=0.49  Score=33.13  Aligned_cols=78  Identities=14%  Similarity=0.143  Sum_probs=49.4

Q ss_pred             CCChhhHHHHHHHhCCCeEEEeecCCCCCcccchheeeeccceeEEEecCCCCCCCEEEEEcCcccc-hHH---HHHHHH
Q 029741           71 ARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVAT-GGT---LSAAVR  146 (188)
Q Consensus        71 ~gG~~~a~~lA~~l~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gk~VLIVDDvi~T-G~T---l~~~~~  146 (188)
                      .+.-.+|..+|..||+++..+.-++..++              ++++......+|++|+||-..... -..   +.-+++
T Consensus         8 ss~~~La~~ia~~Lg~~l~~~~~~~FpDG--------------E~~v~i~~~vrg~dv~ivqs~~~~~nd~lmelll~~~   73 (159)
T d1dkua1           8 NSNPELAKEIADIVGVQLGKCSVTRFSDG--------------EVQINIEESIRGCDCYIIQSTSDPVNEHIMELLIMVD   73 (159)
T ss_dssp             SSCHHHHHHHHHHHTCCCCCEEEEECTTS--------------CEEEEECSCCTTCEEEEECCCCSSHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHhCCCccceEEEEcCCC--------------CEEEEeecCCCCCceEEEecCCCCcHHHHHHHHHHHH
Confidence            34468999999999998765433322222              223332344699999999765443 111   224567


Q ss_pred             HHHHcCCeEEEEEEEe
Q 029741          147 LLERMGAEVVECACVV  162 (188)
Q Consensus       147 ~L~~~Ga~~v~v~~l~  162 (188)
                      .++..||+.+.++...
T Consensus        74 a~k~~~A~~i~~ViPY   89 (159)
T d1dkua1          74 ALKRASAKTINIVIPY   89 (159)
T ss_dssp             HHHHTTCSEEEEEESS
T ss_pred             HHHHcCCcceEEeecc
Confidence            8889999988766544

>d2c4ka1 c.61.1.2 (A:7-166) PRPP synthetase-associated protein 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosylpyrophosphate synthetase-like
domain: PRPP synthetase-associated protein 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.75  E-value=0.38  Score=33.75  Aligned_cols=75  Identities=12%  Similarity=0.072  Sum_probs=48.4

Q ss_pred             hhhHHHHHHHhCCCeEEEeecCCCCCcccchheeeeccceeEEEecCCCCCCCEEEEEcCcccchH----HHHHHHHHHH
Q 029741           74 FVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGG----TLSAAVRLLE  149 (188)
Q Consensus        74 ~~~a~~lA~~l~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~----Tl~~~~~~L~  149 (188)
                      -.+|..+|..||.++..+..++-.++              ++++......+|+.|+||-.....-.    -+.-+++.++
T Consensus        14 ~~LA~~ia~~Lg~~l~~~~~~~F~DG--------------E~~v~i~e~vrg~~V~ivqs~~~~~n~~lmeLll~~da~k   79 (160)
T d2c4ka1          14 TELAKRITERLGAELGKSVVYQETNG--------------ETRVEIKESVRGQDIFIIQTIPRDVNTAVMELLIMAYALK   79 (160)
T ss_dssp             THHHHHHHHHTTCCCCCEEEEECTTS--------------CEEEEECSCCTTCCEEEECCCCSCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCccceEEEECCCC--------------CeeeccCccccCCceEEEeccCcchHHHHHHHHHHHHHHH
Confidence            46999999999998765433322222              22332234469999999976654422    1333577888


Q ss_pred             HcCCeEEEEEEEe
Q 029741          150 RMGAEVVECACVV  162 (188)
Q Consensus       150 ~~Ga~~v~v~~l~  162 (188)
                      .+||+.+.++.-.
T Consensus        80 ~~~a~~It~ViPY   92 (160)
T d2c4ka1          80 TACARNIIGVIPY   92 (160)
T ss_dssp             HTTCSCEEEEESS
T ss_pred             HhCcccceeeccc
Confidence            9999988776544

>d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: CheY protein
species: Thermotoga maritima [TaxId: 2336]

Probab=86.17  E-value=0.48  Score=30.93  Aligned_cols=30  Identities=27%  Similarity=0.424  Sum_probs=20.7

Q ss_pred             CCEEEEEcCcccchHHHHHHHHHHHHcCCeEEE
Q 029741          125 GERALVIDDLVATGGTLSAAVRLLERMGAEVVE  157 (188)
Q Consensus       125 Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~  157 (188)
                      ||+||||||=-.....   +.+.|.+.|.+++.
T Consensus         1 GkrILivDD~~~~~~~---l~~~L~~~g~~v~~   30 (118)
T d1u0sy_           1 GKRVLIVDDAAFMRMM---LKDIITKAGYEVAG   30 (118)
T ss_dssp             CCEEEEECSCHHHHHH---HHHHHHHTTCEEEE
T ss_pred             CCEEEEEeCCHHHHHH---HHHHHHHcCCceEE
Confidence            8999999997655444   44455677877543

>d1dcfa_ c.23.1.2 (A:) Receiver domain of the ethylene receptor {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: Receiver domain of the ethylene receptor
domain: Receiver domain of the ethylene receptor
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=82.51  E-value=0.93  Score=30.15  Aligned_cols=30  Identities=30%  Similarity=0.362  Sum_probs=22.1

Q ss_pred             CCCCEEEEEcCcccchHHHHHHHHHHHHcCCeE
Q 029741          123 EPGERALVIDDLVATGGTLSAAVRLLERMGAEV  155 (188)
Q Consensus       123 ~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~  155 (188)
                      .+|.+||||||--++..   .+.+.|++.|..+
T Consensus         5 ~~g~rILvVDD~~~~~~---~l~~~L~~~G~~v   34 (134)
T d1dcfa_           5 FTGLKVLVMDENGVSRM---VTKGLLVHLGCEV   34 (134)
T ss_dssp             CTTCEEEEECSCHHHHH---HHHHHHHHTTCEE
T ss_pred             CCCCEEEEEeCCHHHHH---HHHHHHHHCCCEE
Confidence            48999999999766544   4555667888864