Citrus Sinensis ID: 029782

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------19
MALSYKFLLLCFLLIFVSPAIAQTSFRPKALVLPVLKNAAVFQYVTQIKQRTPLVPVKLVVHLGGNLLWVDCEKGYVSSTNKTARCGSAQCHLIGLVACGGGKCGDFPNNPISNTGTIGDIRIDVVSVQSTNGRNPGRGVTVPNFIFLCGSEFVLRGLAPGVTGIAALGRTKTALPLQLAAAFSLNRK
cccHHHHHHHHHHHHHHHHHHHcccccccEEEEEEEcccccccEEEEEEEcccccEEEEEEEccccEEEEEccccccccccccccccccccccccccccccccccccccccccccEEEEEEEEEEEEEEEccccccccccccccEEEEcccccccccccccccEEEEEccccccHHHHHHcccccccc
ccHHHHHHHHHHHHHHHcccccccccccccEEEEEEccccccEEEEEEEcccccccEEEEEEccccEEEEEcccccccccccccccccHHHcccccccccccccccEcccccccccccccEEEEEEEEEccccccccccEEcccEEEEcccHHHHcccccccEEEEEcccccccHHHHHHHHcccccc
MALSYKFLLLCFLLIFvspaiaqtsfrpkalvlpvLKNAAVFQYVTQikqrtplvPVKLVVHLGgnllwvdcekgyvsstnktarcgsaqchliglvacgggkcgdfpnnpisntgtigdirIDVVSvqstngrnpgrgvtvpnFIFLCgsefvlrglapgvtgiaalgrtktaLPLQLAAAFSLNRK
MALSYKFLLLCFLLIFVSPAIAQTSFRPKALVLPVLKNAAVFQYVTQikqrtplvPVKLVVHLGGNLLWVDCEKGYVSSTNKTARCGSAQCHLIGLVACGGGKCGDFPNNPISNTGTIGDIRIDVVSVQstngrnpgrgvTVPNFIFLCGSEFVLRGLAPGVTGIAALGRTKTALPLQLAaafslnrk
MALSYKflllcfllifVSPAIAQTSFRPKALVLPVLKNAAVFQYVTQIKQRTPLVPVKLVVHLGGNLLWVDCEKGYVSSTNKTARCGSAQCHLIGLVACGGGKCGDFPNNPISNTGTIGDIRIDVVSVQSTNGRNPGRGVTVPNFIFLCGSEFVLRGLAPGVTGIAALGRTKTALPLQLAAAFSLNRK
***SYKFLLLCFLLIFVSPAIAQTSFRPKALVLPVLKNAAVFQYVTQIKQRTPLVPVKLVVHLGGNLLWVDCEKGYVSSTNKTARCGSAQCHLIGLVACGGGKCGDFPNNPISNTGTIGDIRIDVVSVQSTNGRNPGRGVTVPNFIFLCGSEFVLRGLAPGVTGIAALGRTKTALPLQLAAAF*****
***SYKFLLLCFLLIF******************VLKNAAVFQYVTQIKQRTPLVPVKLVVHLGGNLLWVDCEKGYVSSTNKT*******************KCGDFPNNPISNTGTIGDIRIDVVSVQSTNGRNPGRGVTVPNFIFLCGSEFVLRGLAPGVTGIAALGRTKTALPLQLAAAF*****
MALSYKFLLLCFLLIFVSPAIAQTSFRPKALVLPVLKNAAVFQYVTQIKQRTPLVPVKLVVHLGGNLLWVDCEKGYVSSTNKTARCGSAQCHLIGLVACGGGKCGDFPNNPISNTGTIGDIRIDVVSVQSTNGRNPGRGVTVPNFIFLCGSEFVLRGLAPGVTGIAALGRTKTALPLQLAAAFSLNRK
*ALSYKFLLLCFLLIFVSPAIAQTSFRPKALVLPVLKNAAVFQYVTQIKQRTPLVPVKLVVHLGGNLLWVDCEKGYVSSTNKTARCGSAQCHLIGLVACGGGKCGDFPNNPISNTGTIGDIRIDVVSVQSTNGRNPGRGVTVPNFIFLCGSEFVLRGLAPGVTGIAALGRTKTALPLQLAAAFSL***
iiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MALSYKFLLLCFLLIFVSPAIAQTSFRPKALVLPVLKNAAVFQYVTQIKQRTPLVPVKLVVHLGGNLLWVDCEKGYVSSTNKTARCGSAQCHLIGLVACGGGKCGDFPNNPISNTGTIGDIRIDVVSVQSTNGRNPGRGVTVPNFIFLCGSEFVLRGLAPGVTGIAALGRTKTALPLQLAAAFSLNRK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query188 2.2.26 [Sep-21-2011]
P13917 427 Basic 7S globulin OS=Glyc no no 0.946 0.416 0.348 5e-23
Q8RVH5 433 Basic 7S globulin 2 OS=Gl no no 0.840 0.364 0.354 2e-22
>sp|P13917|7SB1_SOYBN Basic 7S globulin OS=Glycine max GN=BG PE=1 SV=2 Back     alignment and function desciption
 Score =  107 bits (266), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 68/195 (34%), Positives = 98/195 (50%), Gaps = 17/195 (8%)

Query: 9   LLCFLLIFVSPAIAQTSFRPKALV-LPVLKNAAVFQYVTQIKQRTPLVPVKLVVHLGGNL 67
           L C  L F+S ++  T  +P  LV LPV  + +   +   +++RTPL+ V ++V L GN 
Sbjct: 13  LSCSFLFFLSDSVTPT--KPINLVVLPVQNDGSTGLHWANLQKRTPLMQVPVLVDLNGNH 70

Query: 68  LWVDCEKGYVSSTNKTARCGSAQCHLIGLV-----------ACGGGKCGDFPNNPISNTG 116
           LWV+CE+ Y S T +   C S QC                  C    CG    NPI+   
Sbjct: 71  LWVNCEQQYSSKTYQAPFCHSTQCSRANTHQCLSCPAASRPGCHKNTCGLMSTNPITQQT 130

Query: 117 TIGDIRIDVVSVQSTNGRNPGRG--VTVPNFIFLCGSEF-VLRGLAPGVTGIAALGRTKT 173
            +G++  DV+++ +T G     G  VTVP F+F C   F V +GL     G+A LG    
Sbjct: 131 GLGELGEDVLAIHATQGSTQQLGPLVTVPQFLFSCAPSFLVQKGLPRNTQGVAGLGHAPI 190

Query: 174 ALPLQLAAAFSLNRK 188
           +LP QLA+ F L R+
Sbjct: 191 SLPNQLASHFGLQRQ 205
Seed storage protein. Has a protein kinase activity. Binds leginsulin.
Glycine max (taxid: 3847)
>sp|Q8RVH5|7SBG2_SOYBN Basic 7S globulin 2 OS=Glycine max PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query188
255559492273 conserved hypothetical protein [Ricinus 1.0 0.688 0.585 6e-58
291002744 445 xyloglucanase inhibitor 2 [Humulus lupul 1.0 0.422 0.594 9e-57
356576537 438 PREDICTED: basic 7S globulin-like [Glyci 0.888 0.381 0.637 2e-53
388508700 440 unknown [Lotus japonicus] 1.0 0.427 0.569 2e-53
222822564 437 xyloglucan-specific endoglucanase inhibi 0.978 0.421 0.530 4e-53
350536203 438 xyloglucan-specific fungal endoglucanase 0.957 0.410 0.546 1e-52
350536487 438 xyloglucan-specific fungal endoglucanase 0.957 0.410 0.546 1e-52
295646769 437 xyloglucan specific endoglucanase inhibi 0.962 0.414 0.544 2e-52
255552239 433 basic 7S globulin 2 precursor small subu 1.0 0.434 0.535 2e-52
32482806 437 putative xyloglucanase inhibitor [Solanu 0.994 0.427 0.536 2e-52
>gi|255559492|ref|XP_002520766.1| conserved hypothetical protein [Ricinus communis] gi|223540151|gb|EEF41728.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
 Score =  228 bits (582), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 117/200 (58%), Positives = 139/200 (69%), Gaps = 12/200 (6%)

Query: 1   MALSYKFLLLC-FLLIFVSPAIAQTSFRPKALVLPVLKNAAVFQYVTQIKQRTPLVPVKL 59
           MA+S  F L    LLIFVSP+IAQ SFRP+ALV+PV K+A+  QYVTQ++QRTPLVP+ L
Sbjct: 1   MAVSVHFFLASSLLLIFVSPSIAQQSFRPRALVVPVSKDASTLQYVTQVEQRTPLVPINL 60

Query: 60  VVHLGGNLLWVDCEKGYVSSTNKTARCGSAQCHLIGLVACG-----------GGKCGDFP 108
           VVHLGG  LW+DCE+ YVSST + ARCGSA C L G   CG              CG  P
Sbjct: 61  VVHLGGKFLWIDCEQNYVSSTYRPARCGSALCSLGGSDGCGDCFSGPRPGCNNNTCGVSP 120

Query: 109 NNPISNTGTIGDIRIDVVSVQSTNGRNPGRGVTVPNFIFLCGSEFVLRGLAPGVTGIAAL 168
           +NP +NT T G++  DVVSV STNG NPGR VTVP F+F C   F+L+GLA G  GIA L
Sbjct: 121 DNPFTNTATGGELATDVVSVNSTNGSNPGRAVTVPRFLFACAPTFLLQGLATGAVGIAGL 180

Query: 169 GRTKTALPLQLAAAFSLNRK 188
           GR + A P Q A+AFSL+RK
Sbjct: 181 GRNRAAFPSQFASAFSLHRK 200

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|291002744|gb|ADD71504.1| xyloglucanase inhibitor 2 [Humulus lupulus] Back     alignment and taxonomy information
>gi|356576537|ref|XP_003556387.1| PREDICTED: basic 7S globulin-like [Glycine max] Back     alignment and taxonomy information
>gi|388508700|gb|AFK42416.1| unknown [Lotus japonicus] Back     alignment and taxonomy information
>gi|222822564|gb|ACM68431.1| xyloglucan-specific endoglucanase inhibitor protein [Capsicum annuum] Back     alignment and taxonomy information
>gi|350536203|ref|NP_001234746.1| xyloglucan-specific fungal endoglucanase inhibitor protein precursor [Solanum lycopersicum] gi|68449754|gb|AAY97864.1| xyloglucan-specific fungal endoglucanase inhibitor protein precursor [Solanum lycopersicum] Back     alignment and taxonomy information
>gi|350536487|ref|NP_001234249.1| xyloglucan-specific fungal endoglucanase inhibitor protein precursor [Solanum lycopersicum] gi|27372527|gb|AAN87262.1| xyloglucan-specific fungal endoglucanase inhibitor protein precursor [Solanum lycopersicum] Back     alignment and taxonomy information
>gi|295646769|gb|ADG23123.1| xyloglucan specific endoglucanase inhibitor [Solanum melongena] Back     alignment and taxonomy information
>gi|255552239|ref|XP_002517164.1| basic 7S globulin 2 precursor small subunit, putative [Ricinus communis] gi|223543799|gb|EEF45327.1| basic 7S globulin 2 precursor small subunit, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|32482806|gb|AAP84703.1| putative xyloglucanase inhibitor [Solanum tuberosum] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query188
TAIR|locus:2014465 434 AT1G03230 [Arabidopsis thalian 0.888 0.384 0.539 1.3e-45
TAIR|locus:2014475 433 AT1G03220 [Arabidopsis thalian 0.888 0.385 0.533 2.1e-45
TAIR|locus:2182187 386 AT5G19120 [Arabidopsis thalian 0.856 0.417 0.337 1.2e-14
TAIR|locus:2182182 405 AT5G19110 [Arabidopsis thalian 0.819 0.380 0.301 8.2e-13
TAIR|locus:2010786 431 AT1G64830 [Arabidopsis thalian 0.734 0.320 0.304 4.5e-08
TAIR|locus:2095042 500 ASPG1 "ASPARTIC PROTEASE IN GU 0.797 0.3 0.276 0.00011
TAIR|locus:2014465 AT1G03230 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 479 (173.7 bits), Expect = 1.3e-45, P = 1.3e-45
 Identities = 96/178 (53%), Positives = 116/178 (65%)

Query:    22 AQTSFRPKALVLPVLKNAAVFQYVTQIKQRTPLVPVKLVVHLGGNLLWVDCEKGYVSSTN 81
             AQ SFRPKAL+LPV K+ +  QY T I QRTPLVP  +V  LGG   WVDC++GYVS+T 
Sbjct:    23 AQPSFRPKALLLPVTKDPSTLQYTTVINQRTPLVPASVVFDLGGREFWVDCDQGYVSTTY 82

Query:    82 KTARCGSAQCHLIGLVACG-----------GGKCGDFPNNPISNTGTIGDIRIDVVSVQS 130
             ++ RC SA C   G +ACG              CG FP+N I+   T G+  +DVVS+QS
Sbjct:    83 RSPRCNSAVCSRAGSIACGTCFSPPRPGCSNNTCGAFPDNSITGWATSGEFALDVVSIQS 142

Query:   131 TNGRNPGRGVTVPNFIFLCGSEFVLRGLAPGVTGIAALGRTKTALPLQLAAAFSLNRK 188
             TNG NPGR V +PN IF CGS  +L+GLA G  G+A +GR    LPLQ AAAFS NRK
Sbjct:   143 TNGSNPGRFVKIPNLIFSCGSTSLLKGLAKGAVGMAGMGRHNIGLPLQFAAAFSFNRK 200
GO:0004190 "aspartic-type endopeptidase activity" evidence=IEA
GO:0005576 "extracellular region" evidence=ISM
GO:0006508 "proteolysis" evidence=IEA
GO:0005618 "cell wall" evidence=IDA
GO:0009505 "plant-type cell wall" evidence=IDA
GO:0009651 "response to salt stress" evidence=IEP
GO:0005794 "Golgi apparatus" evidence=IDA
GO:0005886 "plasma membrane" evidence=IDA
TAIR|locus:2014475 AT1G03220 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2182187 AT5G19120 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2182182 AT5G19110 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2010786 AT1G64830 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2095042 ASPG1 "ASPARTIC PROTEASE IN GUARD CELL 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
grail3.0003046201
hypothetical protein (438 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query188
cd05489 362 cd05489, xylanase_inhibitor_I_like, TAXI-I inhibit 6e-40
PLN03146 431 PLN03146, PLN03146, aspartyl protease family prote 8e-09
cd05471 283 cd05471, pepsin_like, Pepsin-like aspartic proteas 2e-04
cd05475 273 cd05475, nucellin_like, Nucellins, plant aspartic 4e-04
cd05476 265 cd05476, pepsin_A_like_plant, Chroloplast Nucleoid 7e-04
cd05472 299 cd05472, cnd41_like, Chloroplast Nucleoids DNA-bin 0.002
>gnl|CDD|133156 cd05489, xylanase_inhibitor_I_like, TAXI-I inhibits degradation of xylan in the cell wall Back     alignment and domain information 
 Score =  138 bits (350), Expect = 6e-40
 Identities = 58/152 (38%), Positives = 78/152 (51%), Gaps = 15/152 (9%)

Query: 50  QRTPLVP-VKLVVHLGGNLLWVDCEKGYVSSTNKTARCGSAQCHLIGLVA---------- 98
             TPL   V LV+ L G LLW  C+ G+ S+   T  C S+ C L               
Sbjct: 2   TITPLKGAVPLVLDLAGPLLWSTCDAGHSSTYQ-TVPCSSSVCSLANRYHCPGTCGGAPG 60

Query: 99  --CGGGKCGDFPNNPISNTGTIGDIRIDVVSVQSTNGRNPGRGVTVPNFIFLCGSEFVLR 156
             CG   C   P NP++     GD+  DV+S  +T+G NP   V + NF+F C    +L+
Sbjct: 61  PGCGNNTCTAHPYNPVTGECATGDLTQDVLSANTTDGSNPL-LVVIFNFVFSCAPSLLLK 119

Query: 157 GLAPGVTGIAALGRTKTALPLQLAAAFSLNRK 188
           GL PG  G+A LGR+  +LP QLA+AF + RK
Sbjct: 120 GLPPGAQGVAGLGRSPLSLPAQLASAFGVARK 151

Xylanase inhibitor-I (TAXI-I) is a member of potent TAXI-type inhibitors of fungal and bacterial family 11 xylanases. Plants developed a diverse battery of defense mechanisms in response to continual challenges by a broad spectrum of pathogenic microorganisms. Their defense arsenal includes inhibitors of cell wall-degrading enzymes, which hinder a possible invasion and colonization by antagonists. Xylanases of fungal and bacterial pathogens are the key enzymes in the degradation of xylan in the cell wall. Plants secrete proteins that inhibit these degradation glycosidases, including xylanase. Surprisingly, TAXI-I displays structural homology with the pepsin-like family of aspartic proteases but is proteolytically nonfunctional, because one or more residues of the essential catalytic triad are absent. The structure of the TAXI-inhibitor, Aspergillus niger xylanase I complex, illustrates the ability of tight binding and inhibition with subnanomolar affinity and indicates the importance of the C-terminal end for the differences in xylanase specificity among different TAXI-type inhibitors. This family also contains pepsin-like aspartic proteinases homologous to TAXI-I. Unlike TAXI-I, they have active site aspartates and are functionally active. This family of aspartate proteases is classified by MEROPS as the peptidase family A1 (pepsin A, clan AA). Length = 362
>gnl|CDD|178691 PLN03146, PLN03146, aspartyl protease family protein; Provisional Back     alignment and domain information
>gnl|CDD|133138 cd05471, pepsin_like, Pepsin-like aspartic proteases, bilobal enzymes that cleave bonds in peptides at acidic pH Back     alignment and domain information
>gnl|CDD|133142 cd05475, nucellin_like, Nucellins, plant aspartic proteases specifically expressed in nucellar cells during degradation Back     alignment and domain information
>gnl|CDD|133143 cd05476, pepsin_A_like_plant, Chroloplast Nucleoids DNA-binding Protease and Nucellin, pepsin-like aspartic proteases from plants Back     alignment and domain information
>gnl|CDD|133139 cd05472, cnd41_like, Chloroplast Nucleoids DNA-binding Protease, catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 188
PF14543164 TAXi_N: Xylanase inhibitor N-terminal; PDB: 3HD8_A 99.96
PLN03146 431 aspartyl protease family protein; Provisional 99.96
KOG1339 398 consensus Aspartyl protease [Posttranslational mod 99.95
cd05489 362 xylanase_inhibitor_I_like TAXI-I inhibits degradat 99.92
cd06096 326 Plasmepsin_5 Plasmepsins are a class of aspartic p 99.9
cd05475 273 nucellin_like Nucellins, plant aspartic proteases 99.89
cd05472 299 cnd41_like Chloroplast Nucleoids DNA-binding Prote 99.88
cd05490 325 Cathepsin_D2 Cathepsin_D2, pepsin family of protei 99.86
PTZ00165 482 aspartyl protease; Provisional 99.85
cd05488 320 Proteinase_A_fungi Fungal Proteinase A , aspartic 99.85
cd05478 317 pepsin_A Pepsin A, aspartic protease produced in g 99.85
cd05477 318 gastricsin Gastricsins, asparate proteases produce 99.85
cd05476 265 pepsin_A_like_plant Chroloplast Nucleoids DNA-bind 99.84
cd05485 329 Cathepsin_D_like Cathepsin_D_like, pepsin family o 99.84
cd05486 316 Cathespin_E Cathepsin E, non-lysosomal aspartic pr 99.83
cd06098 317 phytepsin Phytepsin, a plant homolog of mammalian 99.83
cd05471 283 pepsin_like Pepsin-like aspartic proteases, biloba 99.83
PTZ00147 453 plasmepsin-1; Provisional 99.81
cd06097 278 Aspergillopepsin_like Aspergillopepsin_like, aspar 99.81
cd05470109 pepsin_retropepsin_like Cellular and retroviral pe 99.81
PTZ00013 450 plasmepsin 4 (PM4); Provisional 99.8
cd05487 326 renin_like Renin stimulates production of angioten 99.78
cd05474 295 SAP_like SAPs, pepsin-like proteinases secreted fr 99.74
cd05473 364 beta_secretase_like Beta-secretase, aspartic-acid 99.73
PF00026 317 Asp: Eukaryotic aspartyl protease The Prosite entr 99.69
cd0548396 retropepsin_like_bacteria Bacterial aspartate prot 97.67
TIGR02281121 clan_AA_DTGA clan AA aspartic protease, TIGR02281 95.54
PF1365090 Asp_protease_2: Aspartyl protease 93.07
cd05479124 RP_DDI RP_DDI; retropepsin-like domain of DNA dama 91.09
cd0548491 retropepsin_like_LTR_2 Retropepsins_like_LTR, peps 84.27
>PF14543 TAXi_N: Xylanase inhibitor N-terminal; PDB: 3HD8_A 3VLB_A 3VLA_A 3AUP_D 1T6G_A 1T6E_X 2B42_A Back     alignment and domain information 
Probab=99.96  E-value=1.3e-29  Score=197.61  Aligned_cols=132  Identities=33%  Similarity=0.565  Sum_probs=110.2

Q ss_pred             EEEEEEeCCCCceEEEEEECCCCeeeeec----CCCCCCCCcccccCCCccccccCcc--cC--CCCCcccCcccCCCCC
Q 029782           44 YVTQIKQRTPLVPVKLVVHLGGNLLWVDC----EKGYVSSTNKTARCGSAQCHLIGLV--AC--GGGKCGDFPNNPISNT  115 (188)
Q Consensus        44 Y~~~i~iGTPpq~~~vvlDTGSs~~Wv~c----~~c~~Sst~~~~~C~s~~C~~~~~~--~c--~~~~c~~~~~y~~~g~  115 (188)
                      |+++|.||||+|++.|++||||+++|++|    -...+|+||++++|.++.|...+..  .|  .++.|.|.+.|. +++
T Consensus         1 Y~~~~~iGtP~~~~~lvvDtgs~l~W~~C~~~~f~~~~Sst~~~v~C~s~~C~~~~~~~~~~~~~~~~C~y~~~y~-~~s   79 (164)
T PF14543_consen    1 YYVSVSIGTPPQPFSLVVDTGSDLTWVQCPDPPFDPSKSSTYRPVPCSSPQCSSAPSFCPCCCCSNNSCPYSQSYG-DGS   79 (164)
T ss_dssp             EEEEEECTCTTEEEEEEEETT-SSEEEET----STT-TTSSBEC-BTTSHHHHHCTSSBTCCTCESSEEEEEEEET-TTE
T ss_pred             CEEEEEeCCCCceEEEEEECCCCceEEcCCCcccCCccCCcccccCCCCcchhhcccccccCCCCcCcccceeecC-CCc
Confidence            89999999999999999999999999999    3347899999999999999876653  22  267899999995 899


Q ss_pred             eEEEEEEEEEEEEeccCCCCCCCceeeCcEEEEeeeecccCCCCCCcceEEeeCCCCCchHHHHhhh
Q 029782          116 GTIGDIRIDVVSVQSTNGRNPGRGVTVPNFIFLCGSEFVLRGLAPGVTGIAALGRTKTALPLQLAAA  182 (188)
Q Consensus       116 ~~~G~l~~Dtv~l~~~~g~~~~~~v~~~~~~fGca~~~~~~~~~~~~dGIlGLg~~~~S~~~Ql~~~  182 (188)
                      .++|.+++|+++++..+++    ...++++.|||++...  ++....+||||||++++||++||++.
T Consensus        80 ~~~G~l~~D~~~~~~~~~~----~~~~~~~~FGC~~~~~--g~~~~~~GilGLg~~~~Sl~sQl~~~  140 (164)
T PF14543_consen   80 SSSGFLASDTLTFGSSSGG----SNSVPDFIFGCATSNS--GLFYGADGILGLGRGPLSLPSQLASS  140 (164)
T ss_dssp             EEEEEEEEEEEEEEEESSS----SEEEEEEEEEEE-GGG--TSSTTEEEEEE-SSSTTSHHHHHHHH
T ss_pred             cccCceEEEEEEecCCCCC----CceeeeEEEEeeeccc--cCCcCCCcccccCCCcccHHHHHHHh
Confidence            9999999999999986422    2678899999999984  56569999999999999999999765

>PLN03146 aspartyl protease family protein; Provisional Back     alignment and domain information
>KOG1339 consensus Aspartyl protease [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd05489 xylanase_inhibitor_I_like TAXI-I inhibits degradation of xylan in the cell wall Back     alignment and domain information
>cd06096 Plasmepsin_5 Plasmepsins are a class of aspartic proteinases produced by the plasmodium parasite Back     alignment and domain information
>cd05475 nucellin_like Nucellins, plant aspartic proteases specifically expressed in nucellar cells during degradation Back     alignment and domain information
>cd05472 cnd41_like Chloroplast Nucleoids DNA-binding Protease, catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase Back     alignment and domain information
>cd05490 Cathepsin_D2 Cathepsin_D2, pepsin family of proteinases Back     alignment and domain information
>PTZ00165 aspartyl protease; Provisional Back     alignment and domain information
>cd05488 Proteinase_A_fungi Fungal Proteinase A , aspartic proteinase superfamily Back     alignment and domain information
>cd05478 pepsin_A Pepsin A, aspartic protease produced in gastric mucosa of mammals Back     alignment and domain information
>cd05477 gastricsin Gastricsins, asparate proteases produced in gastric mucosa Back     alignment and domain information
>cd05476 pepsin_A_like_plant Chroloplast Nucleoids DNA-binding Protease and Nucellin, pepsin-like aspartic proteases from plants Back     alignment and domain information
>cd05485 Cathepsin_D_like Cathepsin_D_like, pepsin family of proteinases Back     alignment and domain information
>cd05486 Cathespin_E Cathepsin E, non-lysosomal aspartic protease Back     alignment and domain information
>cd06098 phytepsin Phytepsin, a plant homolog of mammalian lysosomal pepsins Back     alignment and domain information
>cd05471 pepsin_like Pepsin-like aspartic proteases, bilobal enzymes that cleave bonds in peptides at acidic pH Back     alignment and domain information
>PTZ00147 plasmepsin-1; Provisional Back     alignment and domain information
>cd06097 Aspergillopepsin_like Aspergillopepsin_like, aspartic proteases of fungal origin Back     alignment and domain information
>cd05470 pepsin_retropepsin_like Cellular and retroviral pepsin-like aspartate proteases Back     alignment and domain information
>PTZ00013 plasmepsin 4 (PM4); Provisional Back     alignment and domain information
>cd05487 renin_like Renin stimulates production of angiotensin and thus affects blood pressure Back     alignment and domain information
>cd05474 SAP_like SAPs, pepsin-like proteinases secreted from pathogens to degrade host proteins Back     alignment and domain information
>cd05473 beta_secretase_like Beta-secretase, aspartic-acid protease important in the pathogenesis of Alzheimer's disease Back     alignment and domain information
>PF00026 Asp: Eukaryotic aspartyl protease The Prosite entry also includes Pfam:PF00077 Back     alignment and domain information
>cd05483 retropepsin_like_bacteria Bacterial aspartate proteases, retropepsin-like protease family Back     alignment and domain information
>TIGR02281 clan_AA_DTGA clan AA aspartic protease, TIGR02281 family Back     alignment and domain information
>PF13650 Asp_protease_2: Aspartyl protease Back     alignment and domain information
>cd05479 RP_DDI RP_DDI; retropepsin-like domain of DNA damage inducible protein Back     alignment and domain information
>cd05484 retropepsin_like_LTR_2 Retropepsins_like_LTR, pepsin-like aspartate proteases Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query188
3vlb_A 413 Crystal Structure Of Xeg-Edgp Length = 413 6e-49
3vla_A 413 Crystal Structure Of Edgp Length = 413 2e-48
3aup_A 403 Crystal Structure Of Basic 7s Globulin From Soybean 2e-22
3hd8_A 389 Crystal Structure Of The Triticum Aestivum Xylanase 3e-06
1t6e_X 381 Crystal Structure Of The Triticum Aestivum Xylanase 4e-06
2b42_A 381 Crystal Structure Of The Triticum Xylanse Inhibitor 6e-06
>pdb|3VLB|A Chain A, Crystal Structure Of Xeg-Edgp Length = 413 Back     alignment and structure 
Iteration: 1

 Score =  189 bits (481), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 97/177 (54%), Positives = 117/177 (66%), Gaps = 11/177 (6%)
Query: 23  QTSFRPKALVLPVLKNAAVFQYVTQIKQRTPLVPVKLVVHLGGNLLWVDCEKGYVSSTNK 82
           Q SFRP ALV+PV K+A+  QYVT I QRTPLV   LVV LGG  LWVDC++ YVSST +
Sbjct: 1   QPSFRPSALVVPVKKDASTLQYVTTINQRTPLVSENLVVDLGGRFLWVDCDQNYVSSTYR 60
Query: 83  TARCGSAQCHLIGLVACG-----------GGKCGDFPNNPISNTGTIGDIRIDVVSVQST 131
             RC ++QC L G +ACG              CG FP NP+ NT T G++  DVVSV+ST
Sbjct: 61  PVRCRTSQCSLSGSIACGDCFNGPRPGCNNNTCGVFPENPVINTATGGEVAEDVVSVEST 120
Query: 132 NGRNPGRGVTVPNFIFLCGSEFVLRGLAPGVTGIAALGRTKTALPLQLAAAFSLNRK 188
           +G + GR VTVP FIF C    +L+ LA GV G+A LGRT+ ALP Q A+AFS  RK
Sbjct: 121 DGSSSGRVVTVPRFIFSCAPTSLLQNLASGVVGMAGLGRTRIALPSQFASAFSFKRK 177
>pdb|3VLA|A Chain A, Crystal Structure Of Edgp Length = 413 Back     alignment and structure
>pdb|3AUP|A Chain A, Crystal Structure Of Basic 7s Globulin From Soybean Length = 403 Back     alignment and structure
>pdb|3HD8|A Chain A, Crystal Structure Of The Triticum Aestivum Xylanase Inhibitor-Iia In Complex With Bacillus Subtilis Xylanase Length = 389 Back     alignment and structure
>pdb|1T6E|X Chain X, Crystal Structure Of The Triticum Aestivum Xylanase Inhibitor I Length = 381 Back     alignment and structure
>pdb|2B42|A Chain A, Crystal Structure Of The Triticum Xylanse Inhibitor-I In Complex With Bacillus Subtilis Xylanase Length = 381 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query188
3vla_A 413 EDGP; extracellular, inhibitor, plant protein; HET 3e-40
3aup_A 403 SBG7S, BG, basic 7S globulin; pepsin-like fold, pl 7e-35
1t6e_X 381 Xylanase inhibitor; two beta-barrel domain structu 3e-29
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A Length = 413 Back     alignment and structure
 Score =  140 bits (352), Expect = 3e-40
 Identities = 96/177 (54%), Positives = 117/177 (66%), Gaps = 11/177 (6%)

Query: 23  QTSFRPKALVLPVLKNAAVFQYVTQIKQRTPLVPVKLVVHLGGNLLWVDCEKGYVSSTNK 82
           + SFRP ALV+PV K+A+  QYVT I QRTPLV   LVV LGG  LWVDC++ YVSST +
Sbjct: 1   EPSFRPSALVVPVKKDASTLQYVTTINQRTPLVSENLVVDLGGRFLWVDCDQNYVSSTYR 60

Query: 83  TARCGSAQCHLIGLVACG-----------GGKCGDFPNNPISNTGTIGDIRIDVVSVQST 131
             RC ++QC L G +ACG              CG FP NP+ NT T G++  DVVSV+ST
Sbjct: 61  PVRCRTSQCSLSGSIACGDCFNGPRPGCNNNTCGVFPENPVINTATGGEVAEDVVSVEST 120

Query: 132 NGRNPGRGVTVPNFIFLCGSEFVLRGLAPGVTGIAALGRTKTALPLQLAAAFSLNRK 188
           +G + GR VTVP FIF C    +L+ LA GV G+A LGRT+ ALP Q A+AFS  RK
Sbjct: 121 DGSSSGRVVTVPRFIFSCAPTSLLQNLASGVVGMAGLGRTRIALPSQFASAFSFKRK 177
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max} Length = 403 Back     alignment and structure
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A Length = 381 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query188
3vla_A 413 EDGP; extracellular, inhibitor, plant protein; HET 100.0
3aup_A 403 SBG7S, BG, basic 7S globulin; pepsin-like fold, pl 100.0
1t6e_X 381 Xylanase inhibitor; two beta-barrel domain structu 99.94
1j71_A 334 Candidapepsin, aspartic proteinase; candida tropic 99.89
2apr_A 325 Rhizopuspepsin; hydrolase (aspartic proteinase); 1 99.89
2qzx_A 342 Candidapepsin-5; aspartic proteinase, aspartyl pro 99.88
1b5f_A239 Protein (cardosin A); hydrolase, aspartic proteina 99.88
1am5_A 324 Pepsin, acid proteinase; aspartyl protease, hydrol 99.88
1mpp_A 361 Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomu 99.88
3c9x_A 329 Trichoderma reesei aspartic protease; aspartic pro 99.88
3psg_A 370 Pepsinogen; hydrolase(acid proteinase zymogen); 1. 99.88
3k1w_A 341 Renin; protease, alternative splicing, aspartyl pr 99.87
2x0b_A 383 Renin; hydrolase-hormone complex, hydrolase hormon 99.87
1tzs_A 351 Cathepsin E; hydrolase, aspartic protease, activat 99.87
1dpj_A 329 Proteinase A; proteinase A, hydrolase-hydrolase in 99.87
3pvk_A 342 Candidapepsin-2; hydrolase; 1.27A {Candida albican 99.87
3cms_A 323 Chymosin B; hydrolase, acid proteinase; 2.00A {Bos 99.87
1htr_B 329 Gastricsin; aspartyl protease; 1.62A {Homo sapiens 99.87
4aa9_A 320 Chymosin; hydrolase, aspartic peptidase, rennet; H 99.87
1oew_A 329 Endothiapepsin; hydrolase, aspartic proteinase mec 99.86
3fv3_A 339 SAPP1P-secreted aspartic protease 1; secreted aspa 99.86
2bju_A 453 Plasmepsin II; aspartic proteinase, drug design, m 99.85
1wkr_A 340 Polyporopepsin; hydrolase, hydrolase-hydrolase inh 99.84
1miq_A 375 Plasmepsin; aspartic proteinase zymogen, domain op 99.84
3qvc_A 451 Histo-aspartic protease; HAP, plasmepsin, zymogen, 99.84
1qdm_A 478 Prophytepsin; aspartic proteinases, saposin-like d 99.84
1ibq_A 325 Aspergillopepsin; aspartic proteinase, hydrolase; 99.83
1bxo_A 323 Protein (penicillopepsin); hydrolase, phosphonate 99.81
1izd_A 323 Aspartic proteinase; sugar binding, acid protease, 99.8
1yg9_A 330 Aspartic protease BLA G 2; allegren, hydrolase, al 99.8
2ewy_A 383 Beta-secretase 2; BACE2, aspartic protease, hydrol 99.8
2qp8_A 395 Beta-secretase 1; BACE1, protease, alternative spl 99.79
1lya_A97 Cathepsin D; lysosomal aspartic protease; HET: NAG 99.77
3vf3_A 402 Beta-secretase 1; structure-based drug design, hyd 99.76
3lpj_A 455 Beta-secretase 1; alzheimer'S, aspartyl protease, 99.76
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A Back     alignment and structure
Probab=100.00  E-value=3e-37  Score=270.22  Aligned_cols=162  Identities=57%  Similarity=0.992  Sum_probs=141.2

Q ss_pred             CCCCceEeeEEecCCCceEEEEEEeCCCCceEEEEEECCCCeeeeecCCCCCCCCcccccCCCccccccCcccC------
Q 029782           26 FRPKALVLPVLKNAAVFQYVTQIKQRTPLVPVKLVVHLGGNLLWVDCEKGYVSSTNKTARCGSAQCHLIGLVAC------   99 (188)
Q Consensus        26 ~~~~~~~~Pl~~~~~~~~Y~~~i~iGTPpq~~~vvlDTGSs~~Wv~c~~c~~Sst~~~~~C~s~~C~~~~~~~c------   99 (188)
                      .+|+++++||++|..+++|+++|.||||||++.|++||||+++|++|++|+.|+||+++.|.++.|..++.++|      
T Consensus         4 ~~~~~~~~pv~~d~~~~~Y~~~i~iGTPpq~~~v~~DTGS~~lWv~c~~c~~Sst~~~v~C~s~~C~~~~~~~~~~c~s~   83 (413)
T 3vla_A            4 FRPSALVVPVKKDASTLQYVTTINQRTPLVSENLVVDLGGRFLWVDCDQNYVSSTYRPVRCRTSQCSLSGSIACGDCFNG   83 (413)
T ss_dssp             CCCSEEEEEEEECTTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSSCCCTTCEECBTTSHHHHHTTCCEEECCSSC
T ss_pred             CCCccEEEEeeecCCCCeEEEEEEcCCCCcceEEEEeCCChhhhcccCCCCCCCCcCccCCCcccccccccCCCcccccC
Confidence            57899999999999999999999999999999999999999999999999999999999999999987765443      


Q ss_pred             -----CCCCcccCcccCCCCCeEEEEEEEEEEEEeccCCCCCCCceeeCcEEEEeeeecccCCCCCCcceEEeeCCCCCc
Q 029782          100 -----GGGKCGDFPNNPISNTGTIGDIRIDVVSVQSTNGRNPGRGVTVPNFIFLCGSEFVLRGLAPGVTGIAALGRTKTA  174 (188)
Q Consensus       100 -----~~~~c~~~~~y~~~g~~~~G~l~~Dtv~l~~~~g~~~~~~v~~~~~~fGca~~~~~~~~~~~~dGIlGLg~~~~S  174 (188)
                           .++.|.|.+.|+.+++.++|+|++|+|+++..+|.+.+..+.+++++|||++.+.+.++..+.|||||||++++|
T Consensus        84 ~~~~c~~~~c~~~i~Y~~d~~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~~~~~g~~~~~dGIlGLg~~~lS  163 (413)
T 3vla_A           84 PRPGCNNNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQNLASGVVGMAGLGRTRIA  163 (413)
T ss_dssp             CBTTBCSSEEEECCEETTTTEECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECGGGGTTSCTTCCEEEECSSSSSS
T ss_pred             CCCCCCCCcCcceeecCcCCceeeeEEEEEEEEecccCCCCcccceeeCCEEEECcccccccCcccccccccccCCCCcc
Confidence                 345799999984478889999999999999765544444578899999999987444566789999999999999


Q ss_pred             hHHHHhhhcCCCC
Q 029782          175 LPLQLAAAFSLNR  187 (188)
Q Consensus       175 ~~~Ql~~~~~~~~  187 (188)
                      +++||+.++++++
T Consensus       164 l~sql~~~~~i~~  176 (413)
T 3vla_A          164 LPSQFASAFSFKR  176 (413)
T ss_dssp             HHHHHHHHHTCCS
T ss_pred             hHHHHhhhcCCCc
Confidence            9999998776533
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max} Back     alignment and structure
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A Back     alignment and structure
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2 Back     alignment and structure
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A Back     alignment and structure
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans} Back     alignment and structure
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Back     alignment and structure
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2 Back     alignment and structure
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A* Back     alignment and structure
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A* Back     alignment and structure
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A Back     alignment and structure
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ... Back     alignment and structure
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens} Back     alignment and structure
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens} Back     alignment and structure
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A* Back     alignment and structure
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A* Back     alignment and structure
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A Back     alignment and structure
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A Back     alignment and structure
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A Back     alignment and structure
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ... Back     alignment and structure
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A* Back     alignment and structure
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ... Back     alignment and structure
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2 Back     alignment and structure
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A* Back     alignment and structure
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A* Back     alignment and structure
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2 Back     alignment and structure
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2 Back     alignment and structure
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A Back     alignment and structure
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A* Back     alignment and structure
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A* Back     alignment and structure
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens} Back     alignment and structure
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ... Back     alignment and structure
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A* Back     alignment and structure
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ... Back     alignment and structure
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 188
d1t6ex_ 381 b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Tr 1e-20
d1mppa_ 357 b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840] 0.001
g1lya.1 338 b.50.1.2 (A:,B:) Cathepsin D {Human (Homo sapiens) 0.003
>d1t6ex_ b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Triticum aestivum) [TaxId: 4565]} Length = 381 Back     information, alignment and structure

class: All beta proteins
fold: Acid proteases
superfamily: Acid proteases
family: Pepsin-like
domain: Xylanase inhibitor TAXI-I
species: Wheat (Triticum aestivum) [TaxId: 4565]

 Score = 85.5 bits (210), Expect = 1e-20
 Identities = 39/171 (22%), Positives = 62/171 (36%), Gaps = 23/171 (13%)

Query: 31  LVLPVLKNAAVFQYVTQIKQRTPLVPVKLVVHLGGNLLWVDCEKGYV------------- 77
           ++ PV K+ A   Y              LV+ + G L+W  C+ G               
Sbjct: 3   VLAPVTKDPATSLYTIPFHDGAS-----LVLDVAGPLVWSTCDGGQPPAEIPCSSPTCLL 57

Query: 78  SSTNKTARCGSAQCHLIGLVACGGGKCGDFPNNPISNTGTIGDIRIDVVSVQSTNGRNPG 137
           ++      C +  C            C  +P NP+S     G +        +T+G  P 
Sbjct: 58  ANAYPAPGCPAPSCGSD----KHDKPCTAYPYNPVSGACAAGSLSHTRFVANTTDGSKPV 113

Query: 138 RGVTVPNFIFLCGSEFVLRGLAPGVTGIAALGRTKTALPLQLAAAFSLNRK 188
             V V   +  C    +L  L  G TG+A L  +  ALP Q+A+A  +  +
Sbjct: 114 SKVNV-GVLAACAPSKLLASLPRGSTGVAGLANSGLALPAQVASAQKVANR 163
>d1mppa_ b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840]} Length = 357 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query188
d1t6ex_ 381 Xylanase inhibitor TAXI-I {Wheat (Triticum aestivu 99.88
d2apra_ 325 Acid protease {Bread mold (Rhizopus chinensis) [Ta 99.82
g1lya.1 338 Cathepsin D {Human (Homo sapiens) [TaxId: 9606]} 99.81
d1dpja_ 329 Acid protease {Baker's yeast (Saccharomyces cerevi 99.8
d1oewa_ 330 Endothiapepsin {Chestnut blight fungus (Endothia p 99.8
d1j71a_ 334 Acid protease {Yeast (Candida tropicalis) [TaxId: 99.8
d1am5a_ 324 Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 99.79
d1eaga_ 342 Acid protease {Yeast (Candida albicans) [TaxId: 54 99.78
d3psga_ 370 Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} 99.78
g1htr.1 372 Pepsin(ogen) {Human (Homo sapiens), progastricsin 99.78
d1wkra_ 340 Acid protease {Irpex lacteus (Polyporus tulipifera 99.78
d1smra_ 335 Chymosin (synonym: renin) {Mouse (Mus musculus) [T 99.77
d1mppa_ 357 Pepsin {Mucor pusillus [TaxId: 4840]} 99.75
d1qdma2 337 Plant acid proteinase, phytepsin {Barley (Hordeum 99.75
g1b5f.1 326 Plant acid proteinase, phytepsin {Cynara carduncul 99.74
d1hrna_ 337 Chymosin (synonym: renin) {Human (Homo sapiens) [T 99.73
d1miqa_ 373 Plasmepsin (a hemoglobin-degrading enzyme) {Plasmo 99.71
d2qp8a1 387 beta-secretase (memapsin) {Human (Homo sapiens) [T 99.71
d3cmsa_ 323 Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId 99.69
d1izea_ 323 Acid protease {Fungus (Aspergillus oryzae) [TaxId: 99.67
d1bxoa_ 323 Acid protease {Fungus (Penicillium janthinellum), 99.66
d2bjua1 329 Plasmepsin (a hemoglobin-degrading enzyme) {Plasmo 99.66
>d1t6ex_ b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Triticum aestivum) [TaxId: 4565]} Back     information, alignment and structure
class: All beta proteins
fold: Acid proteases
superfamily: Acid proteases
family: Pepsin-like
domain: Xylanase inhibitor TAXI-I
species: Wheat (Triticum aestivum) [TaxId: 4565]

Probab=99.88  E-value=1e-22  Score=171.90  Aligned_cols=147  Identities=25%  Similarity=0.423  Sum_probs=108.6

Q ss_pred             ceEeeEEecCCCceEEEEEEeCCCCceEEEEEECCCCeeeeecCCCCCCCCcccccCCCccccccCcc---cCC------
Q 029782           30 ALVLPVLKNAAVFQYVTQIKQRTPLVPVKLVVHLGGNLLWVDCEKGYVSSTNKTARCGSAQCHLIGLV---ACG------  100 (188)
Q Consensus        30 ~~~~Pl~~~~~~~~Y~~~i~iGTPpq~~~vvlDTGSs~~Wv~c~~c~~Sst~~~~~C~s~~C~~~~~~---~c~------  100 (188)
                      ++++||++|..+.+|+++|.||||     |++||||+++||+|+.|...   ...+|.++.|.....+   .|.      
T Consensus         2 ~~~~pi~~~~~~~~Y~~~i~iGtp-----liiDTGSs~~Wvpc~~c~~~---~~~~~~~~~c~~~~~~~~~~c~~~~~~~   73 (381)
T d1t6ex_           2 PVLAPVTKDPATSLYTIPFHDGAS-----LVLDVAGPLVWSTCDGGQPP---AEIPCSSPTCLLANAYPAPGCPAPSCGS   73 (381)
T ss_dssp             CEEEEEEECTTTCCEEEEEETTEE-----EEEETTCCCEEECCCTTCCC---CCCBTTSHHHHHHHSSCCTTCCCCCC--
T ss_pred             CEEEeecccCCCCeEEEEEEcCCc-----eEEECCCCceeeccCCCCCC---cccccCCchhhhccCcCCCCCCCccccC
Confidence            588999999999999999999998     89999999999999887432   2456666666543321   121      


Q ss_pred             ----CCCcccCcccCCCCCeEEEEEEEEEEEEeccCCCCCCCceeeCcEEEEeeeecccCCCCCCcceEEeeCCCCCchH
Q 029782          101 ----GGKCGDFPNNPISNTGTIGDIRIDVVSVQSTNGRNPGRGVTVPNFIFLCGSEFVLRGLAPGVTGIAALGRTKTALP  176 (188)
Q Consensus       101 ----~~~c~~~~~y~~~g~~~~G~l~~Dtv~l~~~~g~~~~~~v~~~~~~fGca~~~~~~~~~~~~dGIlGLg~~~~S~~  176 (188)
                          +..|.|.+.| .+|+.+.|.+++|+|+++..+...... ....++.++|.............+||+|||+++.+++
T Consensus        74 ~~~~~~~~~~~~~Y-~~Gs~~~G~~~~D~v~ig~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~dGi~Glg~~~~s~~  151 (381)
T d1t6ex_          74 DKHDKPCTAYPYNP-VSGACAAGSLSHTRFVANTTDGSKPVS-KVNVGVLAACAPSKLLASLPRGSTGVAGLANSGLALP  151 (381)
T ss_dssp             ----CBCEECCBCT-TTCCBCCEEEEEEEEEEEEESSSSEEE-EEEEEEEEEECCGGGGTTSCTTEEEEEECSSSTTSHH
T ss_pred             CCCCCCCceeEEEe-CCCCEEEEEEEEEEEEeccccccccee-eEEeeeeeeccccccccccccCcceeeecCCCCcchH
Confidence                2346788888 488888999999999999754222111 1234467777766644445678999999999999999


Q ss_pred             HHHhhhcCCC
Q 029782          177 LQLAAAFSLN  186 (188)
Q Consensus       177 ~Ql~~~~~~~  186 (188)
                      +|++.....+
T Consensus       152 ~ql~~~~~~~  161 (381)
T d1t6ex_         152 AQVASAQKVA  161 (381)
T ss_dssp             HHHHHHHTCC
T ss_pred             HHHhhhcCcc
Confidence            9998765543
>d2apra_ b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus chinensis) [TaxId: 4843]} Back     information, alignment and structure
>d1dpja_ b.50.1.2 (A:) Acid protease {Baker's yeast (Saccharomyces cerevisiae), proteinase A [TaxId: 4932]} Back     information, alignment and structure
>d1j71a_ b.50.1.2 (A:) Acid protease {Yeast (Candida tropicalis) [TaxId: 5482]} Back     information, alignment and structure
>d1am5a_ b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 8049]} Back     information, alignment and structure
>d1eaga_ b.50.1.2 (A:) Acid protease {Yeast (Candida albicans) [TaxId: 5476]} Back     information, alignment and structure
>d3psga_ b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1wkra_ b.50.1.2 (A:) Acid protease {Irpex lacteus (Polyporus tulipiferae), Polyporopepsin [TaxId: 5319]} Back     information, alignment and structure
>d1smra_ b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1mppa_ b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840]} Back     information, alignment and structure
>d1qdma2 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase, phytepsin {Barley (Hordeum vulgare) [TaxId: 4513]} Back     information, alignment and structure
>d1hrna_ b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1miqa_ b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium vivax [TaxId: 5855]} Back     information, alignment and structure
>d2qp8a1 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d3cmsa_ b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1izea_ b.50.1.2 (A:) Acid protease {Fungus (Aspergillus oryzae) [TaxId: 5062]} Back     information, alignment and structure
>d1bxoa_ b.50.1.2 (A:) Acid protease {Fungus (Penicillium janthinellum), penicillopepsin [TaxId: 5079]} Back     information, alignment and structure
>d2bjua1 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium falciparum, plasmepsin II [TaxId: 5833]} Back     information, alignment and structure