Citrus Sinensis ID: 029933

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-----
Protein Sequence
MASSEPKESPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIGKIGGST
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccEEEEEEEEEcccHHHHHHHHHccccEEEEEEEcccccEEEEEEccccccccccccccccccccccccEEEEEEccccccccccccccccccccccccEEEEEEccHHHHHHHHHHcccEEEEccccccccEEEEEEcccccEEEEEcccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccHccccccccccHHHcccEEEEEEEEcccHHHHHHHHHHccccEEEEEEEEccccEEEEEEEcccHHHccccHHHHHHHHcccccEEEEEEEccHHHccccccccccccccccEEEEEEEcccHHHHHHHHHHcccEEEEccccccccccEEEEcccccEEEEEcccHHHHHcccc
Coil and Loop (DISEMBL)
massepkespannpglhtardeatngyfmqqtmfrikdpkvSLDFYSRVLGMSLlkrldfpemkFSLYFLgyedtasapadpvdrtvwtfgkpatielthnwgtesdpdfkgyhngnseprgfghigiTVDDVYKACERFERLGvefakkpdggklkgvafikdpddywiEIFDlktigkiggst
Flexible Loop (DISEMBL)
massepkespannpglhtarDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELthnwgtesdPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLgvefakkpdggklkgvafikdpddywIEIFdlktigkiggst
Low Complexity Region (SEG)
MASSEPKESPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIGKIGGST
Disordered region (IsUnstruct)
************************NGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES***FKGYH*****PRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIGKI****
Disordered Region (DISOPRED)
*********************EATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTAS********TVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIF************
Disordered Region (DISEMBL)
*************PGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIGKIGGST
Disordered Region (DISPRO)
*****************TARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIGK*****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MASSEPKESPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIGKIGGST
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	185	2.2.26 [Sep-21-2011]
O49818	186	Lactoylglutathione lyase	N/A	no	0.978	0.973	0.850	6e-91
O04885	185	Lactoylglutathione lyase	N/A	no	0.983	0.983	0.835	7e-90
Q9ZS21	185	Lactoylglutathione lyase	no	no	0.967	0.967	0.821	2e-88
Q42891	185	Lactoylglutathione lyase	N/A	no	0.983	0.983	0.802	5e-86
Q8H0V3	185	Lactoylglutathione lyase	yes	no	0.956	0.956	0.858	2e-84
Q9CPU0	184	Lactoylglutathione lyase	yes	no	0.864	0.869	0.652	1e-59
Q6P7Q4	184	Lactoylglutathione lyase	yes	no	0.864	0.869	0.639	2e-59
Q4R5F2	184	Lactoylglutathione lyase	N/A	no	0.827	0.831	0.629	2e-56
Q04760	184	Lactoylglutathione lyase	yes	no	0.827	0.831	0.629	5e-56
Q9HU72	176	Lactoylglutathione lyase	yes	no	0.902	0.948	0.541	4e-46

>sp|O49818|LGUL_CICAR Lactoylglutathione lyase OS=Cicer arietinum PE=2 SV=1

 Score =  332 bits (852), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 154/181 (85%), Positives = 166/181 (91%)

Query: 1   MASSEPKESPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDF 60
           MA+SE KESPANNPGLHT  DEAT GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDF
Sbjct: 1   MAASESKESPANNPGLHTTIDEATKGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDF 60

Query: 61  PEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEP 120
           PEMKFSLYF+GYEDT  AP++PVDRTVWTF + ATIELTHNWGTESDP+FKGYHNGNS+P
Sbjct: 61  PEMKFSLYFMGYEDTTEAPSNPVDRTVWTFAQKATIELTHNWGTESDPEFKGYHNGNSDP 120

Query: 121 RGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIGK 180
           RGFGHIGITVDD YKACERF+ LGVEF KKPD GK+KG+AFIKDPD YWIE+FD KTIG 
Sbjct: 121 RGFGHIGITVDDTYKACERFQNLGVEFVKKPDDGKMKGIAFIKDPDGYWIELFDRKTIGN 180

Query: 181 I 181
           +
Sbjct: 181 V 181

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.
Cicer arietinum (taxid: 3827)
EC: 4EC: .EC: 4EC: .EC: 1EC: .EC: 5

>sp|O04885|LGUL_BRAJU Lactoylglutathione lyase OS=Brassica juncea GN=GLY I PE=2 SV=1

 Score =  329 bits (843), Expect = 7e-90,   Method: Compositional matrix adjust.
 Identities = 152/182 (83%), Positives = 165/182 (90%)

Query: 3   SSEPKESPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE 62
           +SE KESPANNPGL T RDEAT GY MQQTMFR+KDPK SLDFYSRVLGMSLLKRLDF E
Sbjct: 2   ASEAKESPANNPGLSTVRDEATKGYIMQQTMFRVKDPKASLDFYSRVLGMSLLKRLDFSE 61

Query: 63  MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRG 122
           MKFSLYFLGYEDT++AP DP +RTVWTFG+PATIELTHNWGTESDP+FKGYHNGNSEPRG
Sbjct: 62  MKFSLYFLGYEDTSTAPTDPTERTVWTFGRPATIELTHNWGTESDPEFKGYHNGNSEPRG 121

Query: 123 FGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIGKIG 182
           FGHIG+TVDDV+KACERFE+LGVEF KKP  GK+K +AFIKDPD YWIEIFDLKTIG   
Sbjct: 122 FGHIGVTVDDVHKACERFEQLGVEFVKKPHDGKMKNIAFIKDPDGYWIEIFDLKTIGTTA 181

Query: 183 GS 184
           G+
Sbjct: 182 GN 183

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Brassica juncea (taxid: 3707)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|Q9ZS21|LGUL_SOYBN Lactoylglutathione lyase OS=Glycine max GN=GLXI PE=1 SV=1

 Score =  324 bits (830), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 147/179 (82%), Positives = 164/179 (91%)

Query: 3   SSEPKESPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE 62
           ++EPKESP+NNPGLHT  DEAT GY MQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE
Sbjct: 2   AAEPKESPSNNPGLHTTPDEATKGYIMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE 61

Query: 63  MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRG 122
           MKFSLYF+GYE+TA AP++P+D+ VWTF + ATIELTHNWGTESDP+FKGYHNGNSEPRG
Sbjct: 62  MKFSLYFMGYENTAEAPSNPIDKVVWTFSQKATIELTHNWGTESDPEFKGYHNGNSEPRG 121

Query: 123 FGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIGKI 181
           FGHIG+TVDD YKACERF+ LGVEF KKP+ GK+KG+AFIKDPD YWIEIFD KTIG +
Sbjct: 122 FGHIGVTVDDTYKACERFQNLGVEFVKKPEDGKMKGIAFIKDPDGYWIEIFDRKTIGNV 180

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione. Active toward the hemithioacetal adducts formed by reacting methylglyoxal or phenylglyoxal with glutathione, homoglutathione or gamma-glutamylcysteine, showing no preference for homoglutathione adducts over glutathione adducts.

Glycine max (taxid: 3847)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|Q42891|LGUL_SOLLC Lactoylglutathione lyase OS=Solanum lycopersicum GN=GLX1 PE=2 SV=1

 Score =  316 bits (810), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 146/182 (80%), Positives = 162/182 (89%)

Query: 3   SSEPKESPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE 62
           +SE K+SP+NNPGLH   DEAT GYF+QQTMFRIKDPKVSL+FYS+VLGMSLLKRLDFPE
Sbjct: 2   ASESKDSPSNNPGLHATPDEATKGYFLQQTMFRIKDPKVSLEFYSKVLGMSLLKRLDFPE 61

Query: 63  MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRG 122
           MKFSLYF+GYEDTASAP+DPV+RT WTF + +T+ELTHNWGTESDP+F GYHNGNSEPRG
Sbjct: 62  MKFSLYFMGYEDTASAPSDPVERTAWTFSQKSTLELTHNWGTESDPNFTGYHNGNSEPRG 121

Query: 123 FGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIGKIG 182
           FGHIG+TVDDVYKACERFE LGVEF KKP  GK+KG+AFIKDPD YWIEIFD K I    
Sbjct: 122 FGHIGVTVDDVYKACERFESLGVEFVKKPLDGKMKGIAFIKDPDGYWIEIFDTKIIKDAA 181

Query: 183 GS 184
           GS
Sbjct: 182 GS 183

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Solanum lycopersicum (taxid: 4081)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|Q8H0V3|LGUL_ARATH Lactoylglutathione lyase OS=Arabidopsis thaliana GN=At1g08110 PE=2 SV=1

 Score =  311 bits (797), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 152/177 (85%), Positives = 163/177 (92%)

Query: 3   SSEPKESPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE 62
           +SE +ESPANNPGL T RDEAT GY MQQTMFRIKDPK SLDFYSRVLGMSLLKRLDF E
Sbjct: 2   ASEARESPANNPGLSTNRDEATKGYIMQQTMFRIKDPKASLDFYSRVLGMSLLKRLDFSE 61

Query: 63  MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRG 122
           MKFSLYFLGYEDT +AP DP +RTVWTFG+PATIELTHNWGTESDP+FKGYHNGNSEPRG
Sbjct: 62  MKFSLYFLGYEDTTTAPTDPTERTVWTFGQPATIELTHNWGTESDPEFKGYHNGNSEPRG 121

Query: 123 FGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIG 179
           FGHIG+TVDDV+KACERFE LGVEFAKKP+ GK+K +AFIKDPD YWIEIFDLKTIG
Sbjct: 122 FGHIGVTVDDVHKACERFEELGVEFAKKPNDGKMKNIAFIKDPDGYWIEIFDLKTIG 178

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Arabidopsis thaliana (taxid: 3702)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|Q9CPU0|LGUL_MOUSE Lactoylglutathione lyase OS=Mus musculus GN=Glo1 PE=1 SV=3

 Score =  229 bits (583), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 105/161 (65%), Positives = 126/161 (78%), Gaps = 1/161 (0%)

Query: 21  DEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPA 80
           D +T  + +QQTM RIKDPK SLDFY+RVLG++LL++LDFP MKFSLYFL YED    P 
Sbjct: 24  DPSTKDFLLQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPK 83

Query: 81  DPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERF 140
           D  ++T WTF + AT+ELTHNWGTE D + + YHNGNS+PRGFGHIGI V DVY AC+RF
Sbjct: 84  DKSEKTAWTFSRKATLELTHNWGTEDD-ETQSYHNGNSDPRGFGHIGIAVPDVYSACKRF 142

Query: 141 ERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIGKI 181
           E LGV+F KKPD GK+KG+AFI+DPD YWIEI +   I  I
Sbjct: 143 EELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILNPNKIATI 183

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione. Involved in the regulation of TNF-induced transcriptional activity of NF-kappa-B.

Mus musculus (taxid: 10090)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|Q6P7Q4|LGUL_RAT Lactoylglutathione lyase OS=Rattus norvegicus GN=Glo1 PE=1 SV=3

 Score =  228 bits (581), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 103/161 (63%), Positives = 126/161 (78%), Gaps = 1/161 (0%)

Query: 21  DEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPA 80
           D +T  + +QQTM RIKDPK SLDFY+RVLG++LL++LDFP MKFSLYFL YED    P 
Sbjct: 24  DPSTKDFLLQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPSMKFSLYFLAYEDKNDIPK 83

Query: 81  DPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERF 140
           D  +RT W F + AT+ELTHNWGTE D + + YHNGNS+PRGFGHIGI V DVY+AC+RF
Sbjct: 84  DKTERTAWAFSRKATLELTHNWGTEDD-ETQSYHNGNSDPRGFGHIGIAVPDVYEACKRF 142

Query: 141 ERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIGKI 181
           E LGV+F KKPD GK+KG+AF++DPD YWIEI +   +  I
Sbjct: 143 EELGVKFVKKPDDGKMKGLAFVQDPDGYWIEILNPNKMATI 183

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione. Involved in the regulation of TNF-induced transcriptional activity of NF-kappa-B.

Rattus norvegicus (taxid: 10116)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|Q4R5F2|LGUL_MACFA Lactoylglutathione lyase OS=Macaca fascicularis GN=GLO1 PE=2 SV=3

 Score =  218 bits (554), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 97/154 (62%), Positives = 120/154 (77%), Gaps = 1/154 (0%)

Query: 21  DEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPA 80
           D +T  + +QQTM R+KDPK SLDFY+RVLGM+L+++ DFP MKFSLYFL YED    P 
Sbjct: 24  DPSTKDFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPAMKFSLYFLAYEDKNDIPK 83

Query: 81  DPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERF 140
           D  ++  W   + AT+ELTHNWGTE D + + YHNGNS+PRGFGHIGI V DV+ AC+RF
Sbjct: 84  DKEEKIAWALSRKATLELTHNWGTEDD-ETQSYHNGNSDPRGFGHIGIAVPDVHSACKRF 142

Query: 141 ERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFD 174
           E LGV+F KKPD GK+KG+AFI+DPD YWIEI +
Sbjct: 143 EELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILN 176

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione. Involved in the regulation of TNF-induced transcriptional activity of NF-kappa-B.

Macaca fascicularis (taxid: 9541)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|Q04760|LGUL_HUMAN Lactoylglutathione lyase OS=Homo sapiens GN=GLO1 PE=1 SV=4

 Score =  216 bits (551), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 97/154 (62%), Positives = 120/154 (77%), Gaps = 1/154 (0%)

Query: 21  DEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPA 80
           D +T  + +QQTM R+KDPK SLDFY+RVLGM+L+++ DFP MKFSLYFL YED    P 
Sbjct: 24  DPSTKDFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPK 83

Query: 81  DPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERF 140
           +  ++  W   + AT+ELTHNWGTE D + + YHNGNS+PRGFGHIGI V DVY AC+RF
Sbjct: 84  EKDEKIAWALSRKATLELTHNWGTEDD-ETQSYHNGNSDPRGFGHIGIAVPDVYSACKRF 142

Query: 141 ERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFD 174
           E LGV+F KKPD GK+KG+AFI+DPD YWIEI +
Sbjct: 143 EELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILN 176

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione. Involved in the regulation of TNF-induced transcriptional activity of NF-kappa-B.

Homo sapiens (taxid: 9606)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|Q9HU72|LGUL_PSEAE Lactoylglutathione lyase OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=gloA PE=3 SV=1

 Score =  184 bits (466), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 92/170 (54%), Positives = 109/170 (64%), Gaps = 3/170 (1%)

Query: 13  NPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGY 72
            PG+    D  T  Y    TM R+KDPK SLDFYSRVLGM LL+RLDF E +FSLYFL  
Sbjct: 8   QPGICMEPDAITQEYVFNHTMLRVKDPKRSLDFYSRVLGMRLLRRLDFEEGRFSLYFLAM 67

Query: 73  EDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDD 132
                 P    +R  +TFG+ + +ELTHNWG+ESD     YHNGN +PRGFGHI  +V D
Sbjct: 68  TRGEEVPDAVDERQRYTFGRQSVLELTHNWGSESDD--SQYHNGNQDPRGFGHICFSVPD 125

Query: 133 VYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIGKIG 182
           +  ACERFE LGV F K  D G +K VAFI DPD YW+EI      G++G
Sbjct: 126 LVAACERFETLGVNFVKPLDRG-MKNVAFISDPDGYWVEIVQASLNGEMG 174

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) (taxid: 208964)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	185
255565419	234	lactoylglutathione lyase, putative [Rici	0.994	0.786	0.864	2e-91
3334245	186	RecName: Full=Lactoylglutathione lyase;	0.978	0.973	0.850	3e-89
388516521	186	unknown [Medicago truncatula]	0.994	0.989	0.836	4e-89
117203563	187	glyoxalase I [Arachis hypogaea]	0.983	0.973	0.835	1e-88
225436504	235	PREDICTED: lactoylglutathione lyase isof	0.972	0.765	0.844	2e-88
359479353	185	PREDICTED: lactoylglutathione lyase isof	0.967	0.967	0.849	3e-88
3334244	185	RecName: Full=Lactoylglutathione lyase;	0.983	0.983	0.835	3e-88
449459114	185	PREDICTED: lactoylglutathione lyase-like	0.972	0.972	0.856	1e-87
297843598	235	calmodulin binding protein [Arabidopsis	0.956	0.753	0.853	1e-87
356542658	235	PREDICTED: lactoylglutathione lyase-like	0.967	0.761	0.832	2e-87

>gi|255565419|ref|XP_002523700.1| lactoylglutathione lyase, putative [Ricinus communis] gi|223537004|gb|EEF38640.1| lactoylglutathione lyase, putative [Ricinus communis]

 Score =  340 bits (871), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 159/184 (86%), Positives = 170/184 (92%)

Query: 1   MASSEPKESPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDF 60
           MASSEPKESPANNPGL+T  D+AT GY MQQTM+RIKDPK SLDFYS VLGMSLLKRLDF
Sbjct: 49  MASSEPKESPANNPGLYTTPDDATKGYIMQQTMYRIKDPKQSLDFYSHVLGMSLLKRLDF 108

Query: 61  PEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEP 120
           PEMKFSLYF+GYE+TASAP DPV+RTVWTFG+ ATIELTHNWGTESDPDFKGYHNGNSEP
Sbjct: 109 PEMKFSLYFMGYENTASAPTDPVERTVWTFGQKATIELTHNWGTESDPDFKGYHNGNSEP 168

Query: 121 RGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIGK 180
           RGFGHIGITVDDVYKACERF+ LGVEF KKP+ GK+KG+AFIKDPD YWIEIFDLKTIGK
Sbjct: 169 RGFGHIGITVDDVYKACERFKSLGVEFVKKPEDGKMKGIAFIKDPDGYWIEIFDLKTIGK 228

Query: 181 IGGS 184
             GS
Sbjct: 229 TTGS 232

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|3334245|sp|O49818.1|LGUL_CICAR RecName: Full=Lactoylglutathione lyase; AltName: Full=Aldoketomutase; AltName: Full=Glyoxalase I; Short=Glx I; AltName: Full=Ketone-aldehyde mutase; AltName: Full=Methylglyoxalase; AltName: Full=S-D-lactoylglutathione methylglyoxal lyase gi|2909424|emb|CAA12028.1| Glyoxalase I [Cicer arietinum]

 Score =  332 bits (852), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 154/181 (85%), Positives = 166/181 (91%)

Query: 1   MASSEPKESPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDF 60
           MA+SE KESPANNPGLHT  DEAT GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDF
Sbjct: 1   MAASESKESPANNPGLHTTIDEATKGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDF 60

Query: 61  PEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEP 120
           PEMKFSLYF+GYEDT  AP++PVDRTVWTF + ATIELTHNWGTESDP+FKGYHNGNS+P
Sbjct: 61  PEMKFSLYFMGYEDTTEAPSNPVDRTVWTFAQKATIELTHNWGTESDPEFKGYHNGNSDP 120

Query: 121 RGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIGK 180
           RGFGHIGITVDD YKACERF+ LGVEF KKPD GK+KG+AFIKDPD YWIE+FD KTIG 
Sbjct: 121 RGFGHIGITVDDTYKACERFQNLGVEFVKKPDDGKMKGIAFIKDPDGYWIELFDRKTIGN 180

Query: 181 I 181
           +
Sbjct: 181 V 181

Source: Cicer arietinum

Species: Cicer arietinum

Genus: Cicer

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388516521|gb|AFK46322.1| unknown [Medicago truncatula]

 Score =  332 bits (851), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 154/184 (83%), Positives = 167/184 (90%)

Query: 1   MASSEPKESPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDF 60
           MA+SE KESPANNPGLH   DEAT GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDF
Sbjct: 1   MAASESKESPANNPGLHATVDEATKGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDF 60

Query: 61  PEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEP 120
           PEMKFSLYF+GYEDT+ AP++ VDRTVWTF + ATIELTHNWGTESDP+FKGYHNGNS+P
Sbjct: 61  PEMKFSLYFMGYEDTSEAPSNSVDRTVWTFAQKATIELTHNWGTESDPEFKGYHNGNSDP 120

Query: 121 RGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIGK 180
           RGFGHIGITVDD YKACERF+ LGVEF KKP+ GK+KG+AFIKDPD YWIEIFD KTIG 
Sbjct: 121 RGFGHIGITVDDTYKACERFQNLGVEFVKKPEDGKMKGIAFIKDPDGYWIEIFDRKTIGN 180

Query: 181 IGGS 184
           + GS
Sbjct: 181 VTGS 184

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|117203563|gb|ABJ88950.2| glyoxalase I [Arachis hypogaea]

 Score =  330 bits (846), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 152/182 (83%), Positives = 166/182 (91%)

Query: 3   SSEPKESPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE 62
           +SE KESPANNPGL T RDEAT GY MQQTMFR+KDPK SLDFYSRVLGMSLLKRLDF E
Sbjct: 2   ASEAKESPANNPGLSTVRDEATKGYIMQQTMFRVKDPKASLDFYSRVLGMSLLKRLDFSE 61

Query: 63  MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRG 122
           MKFSLYFLGYEDT++AP DP +RTVWTFG+PATIELTHNWGTESDP+FKGYHNGNSEPRG
Sbjct: 62  MKFSLYFLGYEDTSTAPTDPTERTVWTFGRPATIELTHNWGTESDPEFKGYHNGNSEPRG 121

Query: 123 FGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIGKIG 182
           FGHIG+TVDDV+KACERFE+LGVEF KKP+ GK+K +AFIKDPD YWIEIFDLKTIG   
Sbjct: 122 FGHIGVTVDDVHKACERFEQLGVEFVKKPNDGKMKNIAFIKDPDGYWIEIFDLKTIGTTA 181

Query: 183 GS 184
           G+
Sbjct: 182 GN 183

Source: Arachis hypogaea

Species: Arachis hypogaea

Genus: Arachis

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225436504|ref|XP_002276276.1| PREDICTED: lactoylglutathione lyase isoform 1 [Vitis vinifera] gi|297734925|emb|CBI17159.3| unnamed protein product [Vitis vinifera]

 Score =  330 bits (845), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 152/180 (84%), Positives = 166/180 (92%)

Query: 3   SSEPKESPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE 62
           +SEPKESP+NNPGLH++ DEAT GYFMQQTM+RIKDPKVSLDFYSRVLGMSLLKRLDFPE
Sbjct: 52  ASEPKESPSNNPGLHSSPDEATKGYFMQQTMYRIKDPKVSLDFYSRVLGMSLLKRLDFPE 111

Query: 63  MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRG 122
           MKFSLYF+GYEDTASAP++  +R VWTF + ATIELTHNWGTESDPDFKGYHNGNSEPRG
Sbjct: 112 MKFSLYFMGYEDTASAPSNETERIVWTFSQKATIELTHNWGTESDPDFKGYHNGNSEPRG 171

Query: 123 FGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIGKIG 182
           FGHIGITVDD YKACERFERLGVEF KKPD GK+KG+AFIKDPD YWIEIFDL+ IG + 
Sbjct: 172 FGHIGITVDDTYKACERFERLGVEFVKKPDDGKMKGLAFIKDPDGYWIEIFDLRRIGTVS 231

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359479353|ref|XP_003632261.1| PREDICTED: lactoylglutathione lyase isoform 2 [Vitis vinifera]

 Score =  329 bits (844), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 152/179 (84%), Positives = 166/179 (92%)

Query: 3   SSEPKESPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE 62
           +SEPKESP+NNPGLH++ DEAT GYFMQQTM+RIKDPKVSLDFYSRVLGMSLLKRLDFPE
Sbjct: 2   ASEPKESPSNNPGLHSSPDEATKGYFMQQTMYRIKDPKVSLDFYSRVLGMSLLKRLDFPE 61

Query: 63  MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRG 122
           MKFSLYF+GYEDTASAP++  +R VWTF + ATIELTHNWGTESDPDFKGYHNGNSEPRG
Sbjct: 62  MKFSLYFMGYEDTASAPSNETERIVWTFSQKATIELTHNWGTESDPDFKGYHNGNSEPRG 121

Query: 123 FGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIGKI 181
           FGHIGITVDD YKACERFERLGVEF KKPD GK+KG+AFIKDPD YWIEIFDL+ IG +
Sbjct: 122 FGHIGITVDDTYKACERFERLGVEFVKKPDDGKMKGLAFIKDPDGYWIEIFDLRRIGTV 180

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|3334244|sp|O04885.1|LGUL_BRAJU RecName: Full=Lactoylglutathione lyase; AltName: Full=Aldoketomutase; AltName: Full=Glyoxalase I; Short=Glx I; AltName: Full=Ketone-aldehyde mutase; AltName: Full=Methylglyoxalase; AltName: Full=S-D-lactoylglutathione methylglyoxal lyase gi|2113825|emb|CAA73691.1| Glyoxalase I [Brassica juncea]

 Score =  329 bits (843), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 152/182 (83%), Positives = 165/182 (90%)

Query: 3   SSEPKESPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE 62
           +SE KESPANNPGL T RDEAT GY MQQTMFR+KDPK SLDFYSRVLGMSLLKRLDF E
Sbjct: 2   ASEAKESPANNPGLSTVRDEATKGYIMQQTMFRVKDPKASLDFYSRVLGMSLLKRLDFSE 61

Query: 63  MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRG 122
           MKFSLYFLGYEDT++AP DP +RTVWTFG+PATIELTHNWGTESDP+FKGYHNGNSEPRG
Sbjct: 62  MKFSLYFLGYEDTSTAPTDPTERTVWTFGRPATIELTHNWGTESDPEFKGYHNGNSEPRG 121

Query: 123 FGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIGKIG 182
           FGHIG+TVDDV+KACERFE+LGVEF KKP  GK+K +AFIKDPD YWIEIFDLKTIG   
Sbjct: 122 FGHIGVTVDDVHKACERFEQLGVEFVKKPHDGKMKNIAFIKDPDGYWIEIFDLKTIGTTA 181

Query: 183 GS 184
           G+
Sbjct: 182 GN 183

Source: Brassica juncea

Species: Brassica juncea

Genus: Brassica

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449459114|ref|XP_004147291.1| PREDICTED: lactoylglutathione lyase-like [Cucumis sativus]

 Score =  327 bits (838), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 155/181 (85%), Positives = 165/181 (91%), Gaps = 1/181 (0%)

Query: 1   MASSEPKESPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDF 60
           MASS PKESPANNPGL    D+AT GY MQQTM+RIKDPKVSLDFYSRVLGMSLLKRLDF
Sbjct: 1   MASS-PKESPANNPGLQATPDDATKGYIMQQTMYRIKDPKVSLDFYSRVLGMSLLKRLDF 59

Query: 61  PEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEP 120
           PEMKFSLYF+GYEDTASAP   VDRTVWTFG+ ATIELTHNWGTESDP+FKGYHNGNS+P
Sbjct: 60  PEMKFSLYFMGYEDTASAPESSVDRTVWTFGRKATIELTHNWGTESDPEFKGYHNGNSDP 119

Query: 121 RGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIGK 180
           RGFGHIGITVDD  KACERFERLGVEF KKPD GK+KG+AFIKDPD YWIEIFDLKT+GK
Sbjct: 120 RGFGHIGITVDDTIKACERFERLGVEFVKKPDDGKMKGIAFIKDPDGYWIEIFDLKTVGK 179

Query: 181 I 181
           +
Sbjct: 180 V 180

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297843598|ref|XP_002889680.1| calmodulin binding protein [Arabidopsis lyrata subsp. lyrata] gi|297335522|gb|EFH65939.1| calmodulin binding protein [Arabidopsis lyrata subsp. lyrata]

 Score =  327 bits (838), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 151/177 (85%), Positives = 162/177 (91%)

Query: 3   SSEPKESPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE 62
           +SE +ESPANNPGL T RDEAT GY MQQTMFRIKDPK SLDFYS VLGMSLLKRLDF E
Sbjct: 52  ASEARESPANNPGLSTVRDEATKGYIMQQTMFRIKDPKASLDFYSHVLGMSLLKRLDFSE 111

Query: 63  MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRG 122
           MKFSLYFLGYEDT +APADP +RTVWTFG+PATIELTHNWGTESDP+FKGYHNGNSEPRG
Sbjct: 112 MKFSLYFLGYEDTTTAPADPTERTVWTFGRPATIELTHNWGTESDPEFKGYHNGNSEPRG 171

Query: 123 FGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIG 179
           FGHIG+TVDDV+KACERFE LGVEF KKP+ GK+K +AFIKDPD YWIEIFDLKTIG
Sbjct: 172 FGHIGVTVDDVHKACERFEELGVEFVKKPNDGKMKNIAFIKDPDGYWIEIFDLKTIG 228

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356542658|ref|XP_003539783.1| PREDICTED: lactoylglutathione lyase-like [Glycine max]

 Score =  326 bits (836), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 149/179 (83%), Positives = 163/179 (91%)

Query: 3   SSEPKESPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE 62
           ++EPKESP+NNPGLHT  DEAT GY MQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE
Sbjct: 52  AAEPKESPSNNPGLHTTPDEATKGYIMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE 111

Query: 63  MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRG 122
           MKFSLYF+GYEDT  AP++P+D+ VWTF + ATIELTHNWGTESDP+FKGYHNGNSEPRG
Sbjct: 112 MKFSLYFMGYEDTTEAPSNPIDKVVWTFSQKATIELTHNWGTESDPEFKGYHNGNSEPRG 171

Query: 123 FGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIGKI 181
           FGHIGITVDD YKACERF+ LGVEF KKPD GK+KG+AFIKDPD YWIEIFD KTIG +
Sbjct: 172 FGHIGITVDDTYKACERFQNLGVEFVKKPDDGKMKGIAFIKDPDGYWIEIFDRKTIGNV 230

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	185
TAIR|locus:2205110	235	AT1G08110 [Arabidopsis thalian	0.956	0.753	0.858	5.6e-84
MGI|MGI:95742	184	Glo1 "glyoxalase 1" [Mus muscu	0.864	0.869	0.652	7.5e-57
UNIPROTKB|F1N9Q2	190	GLO1 "Uncharacterized protein"	0.837	0.815	0.666	9.6e-57
RGD|2702	184	Glo1 "glyoxalase 1" [Rattus no	0.827	0.831	0.662	1.2e-56
FB|FBgn0033162	176	CG1707 [Drosophila melanogaste	0.848	0.892	0.639	1.4e-55
UNIPROTKB|Q5BL69	184	glo1 "Glyoxalase 1" [Xenopus (	0.827	0.831	0.658	3.7e-55
UNIPROTKB|A4FUZ1	184	GLO1 "GLO1 protein" [Bos tauru	0.848	0.853	0.626	1.6e-54
ZFIN|ZDB-GENE-030722-9	180	glo1 "glyoxalase 1" [Danio rer	0.8	0.822	0.671	2.6e-54
UNIPROTKB|I3LDM7	184	GLO1 "Uncharacterized protein"	0.827	0.831	0.642	3.4e-54
UNIPROTKB|J9NRV6	184	GLO1 "Uncharacterized protein"	0.827	0.831	0.636	4.3e-54

TAIR|locus:2205110 AT1G08110 [Arabidopsis thaliana (taxid:3702)]

 Score = 841 (301.1 bits), Expect = 5.6e-84, P = 5.6e-84
 Identities = 152/177 (85%), Positives = 163/177 (92%)

Query:     3 SSEPKESPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE 62
             +SE +ESPANNPGL T RDEAT GY MQQTMFRIKDPK SLDFYSRVLGMSLLKRLDF E
Sbjct:    52 ASEARESPANNPGLSTNRDEATKGYIMQQTMFRIKDPKASLDFYSRVLGMSLLKRLDFSE 111

Query:    63 MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRG 122
             MKFSLYFLGYEDT +AP DP +RTVWTFG+PATIELTHNWGTESDP+FKGYHNGNSEPRG
Sbjct:   112 MKFSLYFLGYEDTTTAPTDPTERTVWTFGQPATIELTHNWGTESDPEFKGYHNGNSEPRG 171

Query:   123 FGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIG 179
             FGHIG+TVDDV+KACERFE LGVEFAKKP+ GK+K +AFIKDPD YWIEIFDLKTIG
Sbjct:   172 FGHIGVTVDDVHKACERFEELGVEFAKKPNDGKMKNIAFIKDPDGYWIEIFDLKTIG 228

GO:0004462 "lactoylglutathione lyase activity" evidence=IEA;ISS

GO:0005975 "carbohydrate metabolic process" evidence=ISS

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0046872 "metal ion binding" evidence=IEA

GO:0005516 "calmodulin binding" evidence=ISS

GO:0046686 "response to cadmium ion" evidence=IEP;RCA

GO:0005829 "cytosol" evidence=IDA

GO:0006094 "gluconeogenesis" evidence=RCA

GO:0006096 "glycolysis" evidence=RCA

GO:0009651 "response to salt stress" evidence=RCA

MGI|MGI:95742 Glo1 "glyoxalase 1" [Mus musculus (taxid:10090)]

 Score = 585 (211.0 bits), Expect = 7.5e-57, P = 7.5e-57
 Identities = 105/161 (65%), Positives = 126/161 (78%)

Query:    21 DEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPA 80
             D +T  + +QQTM RIKDPK SLDFY+RVLG++LL++LDFP MKFSLYFL YED    P 
Sbjct:    24 DPSTKDFLLQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPK 83

Query:    81 DPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERF 140
             D  ++T WTF + AT+ELTHNWGTE D + + YHNGNS+PRGFGHIGI V DVY AC+RF
Sbjct:    84 DKSEKTAWTFSRKATLELTHNWGTEDD-ETQSYHNGNSDPRGFGHIGIAVPDVYSACKRF 142

Query:   141 ERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIGKI 181
             E LGV+F KKPD GK+KG+AFI+DPD YWIEI +   I  I
Sbjct:   143 EELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILNPNKIATI 183

GO:0004462 "lactoylglutathione lyase activity" evidence=ISO;IDA

GO:0005975 "carbohydrate metabolic process" evidence=ISO

GO:0006357 "regulation of transcription from RNA polymerase II promoter" evidence=IDA

GO:0006749 "glutathione metabolic process" evidence=ISO

GO:0009438 "methylglyoxal metabolic process" evidence=ISO

GO:0016829 "lyase activity" evidence=IEA

GO:0043066 "negative regulation of apoptotic process" evidence=ISO

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|F1N9Q2 GLO1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 584 (210.6 bits), Expect = 9.6e-57, P = 9.6e-57
 Identities = 104/156 (66%), Positives = 125/156 (80%)

Query:    21 DEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPA 80
             D +T  +  QQTM R+KDPK SLDFY+RVLGM+LL++ DFP MKFSLYFLGYED    P 
Sbjct:    30 DPSTKDFIFQQTMLRVKDPKKSLDFYTRVLGMTLLQKFDFPPMKFSLYFLGYEDKNDIPK 89

Query:    81 DPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERF 140
             D  +RT WTF + AT+ELTHNWGTE+D + + YHNGNS+PRGFGHIGI V DV KAC+RF
Sbjct:    90 DKAERTSWTFSRKATLELTHNWGTEND-EKQSYHNGNSDPRGFGHIGIAVPDVNKACKRF 148

Query:   141 ERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLK 176
             E LGV+F KKPD GK+KG+AF++DPD YWIEI + K
Sbjct:   149 EELGVKFVKKPDDGKMKGLAFVQDPDGYWIEILNPK 184

GO:0046872 "metal ion binding" evidence=IEA

GO:0004462 "lactoylglutathione lyase activity" evidence=IEA

GO:0006357 "regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0043066 "negative regulation of apoptotic process" evidence=IEA

RGD|2702 Glo1 "glyoxalase 1" [Rattus norvegicus (taxid:10116)]

 Score = 583 (210.3 bits), Expect = 1.2e-56, P = 1.2e-56
 Identities = 102/154 (66%), Positives = 124/154 (80%)

Query:    21 DEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPA 80
             D +T  + +QQTM RIKDPK SLDFY+RVLG++LL++LDFP MKFSLYFL YED    P 
Sbjct:    24 DPSTKDFLLQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPSMKFSLYFLAYEDKNDIPK 83

Query:    81 DPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERF 140
             D  +RT W F + AT+ELTHNWGTE D + + YHNGNS+PRGFGHIGI V DVY+AC+RF
Sbjct:    84 DKTERTAWAFSRKATLELTHNWGTEDD-ETQSYHNGNSDPRGFGHIGIAVPDVYEACKRF 142

Query:   141 ERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFD 174
             E LGV+F KKPD GK+KG+AF++DPD YWIEI +
Sbjct:   143 EELGVKFVKKPDDGKMKGLAFVQDPDGYWIEILN 176

GO:0004462 "lactoylglutathione lyase activity" evidence=ISO;ISS;IDA

GO:0005975 "carbohydrate metabolic process" evidence=IDA

GO:0006357 "regulation of transcription from RNA polymerase II promoter" evidence=IEA;ISO

GO:0006749 "glutathione metabolic process" evidence=IDA

GO:0009438 "methylglyoxal metabolic process" evidence=IDA

GO:0043066 "negative regulation of apoptotic process" evidence=ISO;ISS

GO:0046872 "metal ion binding" evidence=IEA

FB|FBgn0033162 CG1707 [Drosophila melanogaster (taxid:7227)]

 Score = 573 (206.8 bits), Expect = 1.4e-55, P = 1.4e-55
 Identities = 101/158 (63%), Positives = 122/158 (77%)

Query:    21 DEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPA 80
             D +T  +  QQTM+RIKDP+ SL FY+ VLGM+LL +LDFPE KFSLYFLGYE+    P 
Sbjct:    20 DSSTKDFLFQQTMYRIKDPRKSLPFYTGVLGMTLLVKLDFPEAKFSLYFLGYENATDVPK 79

Query:    81 DPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERF 140
             DP  R  W   + ATIELTHNWGTE DPD + YH GN++PRGFGHIGI V DVY AC+RF
Sbjct:    80 DPKQRRSWALSRKATIELTHNWGTERDPD-QNYHTGNTDPRGFGHIGIMVPDVYAACQRF 138

Query:   141 ERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTI 178
             + LGV+F KKPD G++KG+AFIKDPD YWIEIF+  ++
Sbjct:   139 QELGVDFVKKPDDGRMKGLAFIKDPDGYWIEIFNAHSV 176

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|Q5BL69 glo1 "Glyoxalase 1" [Xenopus (Silurana) tropicalis (taxid:8364)]

 Score = 569 (205.4 bits), Expect = 3.7e-55, P = 3.7e-55
 Identities = 102/155 (65%), Positives = 121/155 (78%)

Query:    24 TNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPV 83
             T  + +QQTM RIKDPK SL+FY+ VLGM+LL++ DFP MKFSLYF+ YED    PAD  
Sbjct:    28 TKDFMLQQTMLRIKDPKKSLEFYTNVLGMTLLQKFDFPSMKFSLYFMAYEDKKDIPADVN 87

Query:    84 DRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERL 143
             +RT WTF + AT+ELTHNWGTE+D   K YHNGNS+PRGFGHIG+ V DVY AC+RFE L
Sbjct:    88 ERTAWTFSRKATLELTHNWGTENDE--KPYHNGNSDPRGFGHIGLAVPDVYAACKRFEEL 145

Query:   144 GVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTI 178
             GV F KKPD GK+KG+AFI+DPD YWIEI    T+
Sbjct:   146 GVTFVKKPDDGKMKGLAFIQDPDGYWIEILSPNTM 180

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0043066 "negative regulation of apoptotic process" evidence=ISS

UNIPROTKB|A4FUZ1 GLO1 "GLO1 protein" [Bos taurus (taxid:9913)]

 Score = 563 (203.2 bits), Expect = 1.6e-54, P = 1.6e-54
 Identities = 99/158 (62%), Positives = 124/158 (78%)

Query:    21 DEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPA 80
             D +T  + +QQTM RIKDPK SLDFY+R+LGM+LL++LDFP MKFSLYFL YED    P 
Sbjct:    24 DPSTKDFLLQQTMLRIKDPKKSLDFYTRILGMTLLQKLDFPTMKFSLYFLAYEDKNDIPK 83

Query:    81 DPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERF 140
             D  ++  W F + AT+ELTHNWGTE D + + YH+GNS+PRGFGHIGI V DV+ AC+RF
Sbjct:    84 DKDEKVAWVFSRKATLELTHNWGTEDD-ETQSYHSGNSDPRGFGHIGIAVPDVHGACKRF 142

Query:   141 ERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTI 178
             E LG++F KKPD GK+KG+AFI+DPD YWIEI +  T+
Sbjct:   143 EELGIKFVKKPDDGKMKGLAFIQDPDGYWIEILNPNTM 180

GO:0043066 "negative regulation of apoptotic process" evidence=IEA

GO:0006357 "regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0004462 "lactoylglutathione lyase activity" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

ZFIN|ZDB-GENE-030722-9 glo1 "glyoxalase 1" [Danio rerio (taxid:7955)]

 Score = 561 (202.5 bits), Expect = 2.6e-54, P = 2.6e-54
 Identities = 100/149 (67%), Positives = 119/149 (79%)

Query:    24 TNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPV 83
             T  + MQQTM R+KDP  SLDFY+R+LGM+LL++ DFP M+F+LYFLGYED    PAD  
Sbjct:    22 TKDFMMQQTMLRVKDPVKSLDFYTRILGMTLLQKFDFPSMRFTLYFLGYEDKKEIPADVK 81

Query:    84 DRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERL 143
             +RT WTF + ATIELTHNWG+E+D D + YHNGNS+PRGFGHIGI V DVY AC+ FE  
Sbjct:    82 ERTAWTFSRRATIELTHNWGSETD-DSQSYHNGNSDPRGFGHIGIAVPDVYAACKLFEEN 140

Query:   144 GVEFAKKPDGGKLKGVAFIKDPDDYWIEI 172
             GV F KKPD GK+KG+AFI+DPD YWIEI
Sbjct:   141 GVTFVKKPDEGKMKGLAFIQDPDGYWIEI 169

GO:0046872 "metal ion binding" evidence=IEA

GO:0004462 "lactoylglutathione lyase activity" evidence=IEA

UNIPROTKB|I3LDM7 GLO1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 560 (202.2 bits), Expect = 3.4e-54, P = 3.4e-54
 Identities = 99/154 (64%), Positives = 121/154 (78%)

Query:    21 DEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPA 80
             D +T  +  QQTM RIKDPK SLDFY+R+LGM+LL++LDFP MKFSLYFL YED    P 
Sbjct:    24 DPSTKDFLFQQTMLRIKDPKKSLDFYTRILGMTLLQKLDFPTMKFSLYFLAYEDKNDIPK 83

Query:    81 DPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERF 140
             D  ++  W F + AT+ELTHNWGTE D + + YH+GNS+PRGFGHIGI V DV+ AC+RF
Sbjct:    84 DKSEKAAWAFSRKATLELTHNWGTEDD-ESQSYHSGNSDPRGFGHIGIAVPDVHGACKRF 142

Query:   141 ERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFD 174
             E LGV+F KKPD GK+KG+AFI+DPD YWIEI +
Sbjct:   143 EELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILN 176

GO:0043066 "negative regulation of apoptotic process" evidence=IEA

GO:0006357 "regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0004462 "lactoylglutathione lyase activity" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|J9NRV6 GLO1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 559 (201.8 bits), Expect = 4.3e-54, P = 4.3e-54
 Identities = 98/154 (63%), Positives = 122/154 (79%)

Query:    21 DEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPA 80
             D +T  + +QQTM RIKDPK SLDFY+R+LGM+LL++LDFP MKFSLYFL YE+    P 
Sbjct:    24 DPSTKDFLLQQTMLRIKDPKKSLDFYTRILGMTLLQKLDFPTMKFSLYFLAYEEKNDIPK 83

Query:    81 DPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERF 140
             D  ++  W F + AT+ELTHNWGTE D + + YH+GNS+PRGFGHIGI V DV+ AC+RF
Sbjct:    84 DKDEKVAWAFSRKATLELTHNWGTEDD-ETQSYHSGNSDPRGFGHIGIAVPDVHSACKRF 142

Query:   141 ERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFD 174
             E LGV+F KKPD GK+KG+AFI+DPD YWIEI +
Sbjct:   143 EELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILN 176

GO:0046872 "metal ion binding" evidence=IEA

GO:0004462 "lactoylglutathione lyase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q4R5F2	LGUL_MACFA	4, ., 4, ., 1, ., 5	0.6298	0.8270	0.8315	N/A	no
O04885	LGUL_BRAJU	4, ., 4, ., 1, ., 5	0.8351	0.9837	0.9837	N/A	no
Q04760	LGUL_HUMAN	4, ., 4, ., 1, ., 5	0.6298	0.8270	0.8315	yes	no
Q9CPU0	LGUL_MOUSE	4, ., 4, ., 1, ., 5	0.6521	0.8648	0.8695	yes	no
O49818	LGUL_CICAR	4, ., 4, ., 1, ., 5	0.8508	0.9783	0.9731	N/A	no
Q8H0V3	LGUL_ARATH	4, ., 4, ., 1, ., 5	0.8587	0.9567	0.9567	yes	no
Q9HU72	LGUL_PSEAE	4, ., 4, ., 1, ., 5	0.5411	0.9027	0.9488	yes	no
Q42891	LGUL_SOLLC	4, ., 4, ., 1, ., 5	0.8021	0.9837	0.9837	N/A	no
Q9ZS21	LGUL_SOYBN	4, ., 4, ., 1, ., 5	0.8212	0.9675	0.9675	no	no
Q6P7Q4	LGUL_RAT	4, ., 4, ., 1, ., 5	0.6397	0.8648	0.8695	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	4.4.1	0.691
4th Layer	4.4.1.5	0.994

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	185
PLN02367	233	PLN02367, PLN02367, lactoylglutathione lyase	1e-132
PLN03042	185	PLN03042, PLN03042, Lactoylglutathione lyase; Prov	1e-124
TIGR00068	150	TIGR00068, glyox_I, lactoylglutathione lyase	3e-69
cd07233	121	cd07233, Glyoxalase_I, Glyoxalase I catalyzes the	8e-65
PRK10291	129	PRK10291, PRK10291, glyoxalase I; Provisional	6e-24
pfam00903	120	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resist	3e-21
PLN02300	286	PLN02300, PLN02300, lactoylglutathione lyase	3e-19
PLN02300	286	PLN02300, PLN02300, lactoylglutathione lyase	3e-14
cd06587	110	cd06587, Glo_EDI_BRP_like, This domain superfamily	4e-12
COG0346	138	COG0346, GloA, Lactoylglutathione lyase and relate	6e-12
pfam12681	109	pfam12681, Glyoxalase_2, Glyoxalase-like domain	7e-09
cd07245	114	cd07245, Glo_EDI_BRP_like_9, This conserved domain	2e-06
cd08358	127	cd08358, Glo_EDI_BRP_like_21, This conserved domai	2e-04
cd08346	126	cd08346, PcpA_N_like, N-terminal domain of Sphingo	3e-04
cd07249	128	cd07249, MMCE, Methylmalonyl-CoA epimerase (MMCE)	6e-04
pfam13669	110	pfam13669, Glyoxalase_4, Glyoxalase/Bleomycin resi	0.001
cd07254	120	cd07254, Glo_EDI_BRP_like_20, This conserved domai	0.004

>gnl|CDD|177995 PLN02367, PLN02367, lactoylglutathione lyase

 Score =  369 bits (948), Expect = e-132
 Identities = 156/182 (85%), Positives = 166/182 (91%)

Query: 3   SSEPKESPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE 62
           +SEPKESPANNPGL T+ DEAT GY MQQTM+RIKDPK SLDFYSRVLGMSLLKRLDFPE
Sbjct: 50  ASEPKESPANNPGLSTSPDEATKGYIMQQTMYRIKDPKASLDFYSRVLGMSLLKRLDFPE 109

Query: 63  MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRG 122
           MKFSLYF+GYEDTASAP DP +RTVWTFG+ ATIELTHNWGTESDPDFKGYHNGNSEPRG
Sbjct: 110 MKFSLYFMGYEDTASAPTDPTERTVWTFGQKATIELTHNWGTESDPDFKGYHNGNSEPRG 169

Query: 123 FGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIGKIG 182
           FGHIGITVDDVYKACERFE LGVEF KKP+ GK+KG+AFIKDPD YWIEIFDLKTIG   
Sbjct: 170 FGHIGITVDDVYKACERFEELGVEFVKKPNDGKMKGIAFIKDPDGYWIEIFDLKTIGTTT 229

Query: 183 GS 184
            +
Sbjct: 230 VN 231

Length = 233

>gnl|CDD|215548 PLN03042, PLN03042, Lactoylglutathione lyase; Provisional

 Score =  346 bits (889), Expect = e-124
 Identities = 150/180 (83%), Positives = 160/180 (88%)

Query: 2   ASSEPKESPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFP 61
            +S  KES ANNPGL    DEAT GY MQQTMFRIKDPK SLDFYSRVLGMSLLKRLDFP
Sbjct: 1   MASASKESAANNPGLCGNPDEATKGYIMQQTMFRIKDPKASLDFYSRVLGMSLLKRLDFP 60

Query: 62  EMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPR 121
           EMKFSLYFLGYED+ +AP DP +RTVWTFG+ ATIELTHNWGTESDP+FKGYHNGNS+PR
Sbjct: 61  EMKFSLYFLGYEDSETAPTDPPERTVWTFGRKATIELTHNWGTESDPEFKGYHNGNSDPR 120

Query: 122 GFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIGKI 181
           GFGHIGITVDDVYKACERFE+LGVEF KKPD GK+KG+AFIKDPD YWIEIFDLK IG I
Sbjct: 121 GFGHIGITVDDVYKACERFEKLGVEFVKKPDDGKMKGLAFIKDPDGYWIEIFDLKRIGGI 180

Length = 185

>gnl|CDD|232807 TIGR00068, glyox_I, lactoylglutathione lyase

 Score =  206 bits (527), Expect = 3e-69
 Identities = 76/163 (46%), Positives = 88/163 (53%), Gaps = 27/163 (16%)

Query: 19  ARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASA 78
             D  T    +  TM R+ D   SLDFY+ VLGM LL++ DFPEMKFSL FLGY D  SA
Sbjct: 8   VADPKTKKRRLLHTMLRVGDLDKSLDFYTEVLGMKLLRKRDFPEMKFSLAFLGYGDETSA 67

Query: 79  PADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACE 138
                          A IELTHNWGTE       Y  GN    GFGHI I VDDVYKACE
Sbjct: 68  ---------------AVIELTHNWGTEK------YDLGN----GFGHIAIGVDDVYKACE 102

Query: 139 RFERLGVEFAKK--PDGGKLKGVAFIKDPDDYWIEIFDLKTIG 179
           R   LG    ++  P  G    +AF++DPD Y IE+   K+  
Sbjct: 103 RVRALGGNVVREPGPVKGGTTVIAFVEDPDGYKIELIQRKSTK 145

Lactoylglutathione lyase is also known as aldoketomutase and glyoxalase I. Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits This model twice [Central intermediary metabolism, Amino sugars, Energy metabolism, Other]. Length = 150

>gnl|CDD|176659 cd07233, Glyoxalase_I, Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

 Score =  194 bits (496), Expect = 8e-65
 Identities = 75/145 (51%), Positives = 88/145 (60%), Gaps = 24/145 (16%)

Query: 29  MQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVW 88
              TM R+KD + SLDFY+ VLGM LL+R DFPE KF+L FLGY D  S           
Sbjct: 1   FLHTMLRVKDLEKSLDFYTDVLGMKLLRRKDFPEGKFTLVFLGYPDEDSEG--------- 51

Query: 89  TFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFA 148
                  +ELT+NWGTE     + Y NGN    GFGH+   VDDVY ACER E +GVE  
Sbjct: 52  ------VLELTYNWGTE-----EPYDNGN----GFGHLAFAVDDVYAACERLEEMGVEVT 96

Query: 149 KKPDGGKLKGVAFIKDPDDYWIEIF 173
           K P  G +KG+AFIKDPD YWIE+ 
Sbjct: 97  KPPGDGGMKGIAFIKDPDGYWIELI 121

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic glyoxalase I uses nickel. However, eukaryotic Trypanosomatid parasites also use nickel as a cofactor, which could possibly be explained by acquiring their GLOI gene by horizontal gene transfer. Human glyoxalase I is a two-domain enzyme and it has the structure of a domain-swapped dimer with two active sites located at the dimer interface. In yeast, in various plants, insects and Plasmodia, glyoxalase I is four-domain, possibly the result of a further gene duplication and an additional gene fusing event. Length = 121

>gnl|CDD|182358 PRK10291, PRK10291, glyoxalase I; Provisional

 Score = 90.9 bits (225), Expect = 6e-24
 Identities = 53/152 (34%), Positives = 81/152 (53%), Gaps = 31/152 (20%)

Query: 33  MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 92
           M R+ D + S+DFY+ VLGM LL+  + PE K+SL F+GY                   +
Sbjct: 1   MLRVGDLQRSIDFYTNVLGMKLLRTSENPEYKYSLAFVGYGPET---------------E 45

Query: 93  PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD 152
            A IELT+NWG +       Y  G +    +GHI ++VD+  +ACE+  + G    +  +
Sbjct: 46  EAVIELTYNWGVDK------YELGTA----YGHIALSVDNAAEACEKIRQNGGNVTR--E 93

Query: 153 GGKLKG----VAFIKDPDDYWIEIFDLKTIGK 180
            G +KG    +AF++DPD Y IE+ + K  G+
Sbjct: 94  AGPVKGGTTVIAFVEDPDGYKIELIEEKDAGR 125

Length = 129

>gnl|CDD|216182 pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily

 Score = 83.6 bits (207), Expect = 3e-21
 Identities = 36/143 (25%), Positives = 52/143 (36%), Gaps = 27/143 (18%)

Query: 31  QTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTF 90
               R+ D + SLDFY+ VLG  L++ +D  E      F                     
Sbjct: 4   HVALRVGDLEKSLDFYTDVLGFKLVEEVDDGEGPLRSAFFTAGGR--------------- 48

Query: 91  GKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKK 150
                +EL  N          G H           I  +VDDV  A +R +  GVE  ++
Sbjct: 49  ----VLELLLNETPPPAAAGFGGH-------HIAFIAFSVDDVDAAYDRLKAAGVEIVRE 97

Query: 151 P-DGGKLKGVAFIKDPDDYWIEI 172
           P   G     ++ +DPD   IE+
Sbjct: 98  PGRHGWGGRYSYFRDPDGNLIEL 120

Length = 120

>gnl|CDD|215169 PLN02300, PLN02300, lactoylglutathione lyase

 Score = 82.1 bits (203), Expect = 3e-19
 Identities = 51/149 (34%), Positives = 74/149 (49%), Gaps = 33/149 (22%)

Query: 29  MQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGY--EDTASAPADPVDRT 86
           M   ++R+ D   ++ FY+  LGM LL++ D PE K++  FLGY  ED+           
Sbjct: 25  MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSNFV-------- 76

Query: 87  VWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVE 146
                    +ELT+N+G +       Y  G     GFGH GI V+DV K  E  +  G +
Sbjct: 77  ---------VELTYNYGVDK------YDIGT----GFGHFGIAVEDVAKTVELVKAKGGK 117

Query: 147 FAKKP---DGGKLKGVAFIKDPDDYWIEI 172
             ++P    GGK   +AF+KDPD Y  E+
Sbjct: 118 VTREPGPVKGGKSV-IAFVKDPDGYKFEL 145

Length = 286

>gnl|CDD|215169 PLN02300, PLN02300, lactoylglutathione lyase

 Score = 68.7 bits (168), Expect = 3e-14
 Identities = 46/146 (31%), Positives = 66/146 (45%), Gaps = 30/146 (20%)

Query: 31  QTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTF 90
           Q M R+ D   S+ FY +  GM LL++ D PE K+++  +GY      P D         
Sbjct: 157 QVMLRVGDLDRSIKFYEKAFGMKLLRKRDNPEYKYTIAMMGY-----GPED--------- 202

Query: 91  GKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKK 150
            K   +ELT+N+G         Y  GN     +  I I  DDVYK  E  + +G +  ++
Sbjct: 203 -KTTVLELTYNYGV------TEYTKGN----AYAQIAIGTDDVYKTAEAIKLVGGKITRE 251

Query: 151 PD---GGKLKGVAFIKDPDDYWIEIF 173
           P    G   K  A + DPD  W  +F
Sbjct: 252 PGPLPGINTKITACL-DPDG-WKTVF 275

Length = 286

>gnl|CDD|211348 cd06587, Glo_EDI_BRP_like, This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

 Score = 59.7 bits (145), Expect = 4e-12
 Identities = 36/143 (25%), Positives = 49/143 (34%), Gaps = 34/143 (23%)

Query: 31  QTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTF 90
                + D + ++ FY  VLG  +L+R           FL    T               
Sbjct: 1   HVGLTVPDLEAAVAFYEDVLGFEVLERDGGGAE---FAFLRLGGT--------------- 42

Query: 91  GKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKK 150
                +EL           F+G         G  H+   VDDV  A ER +  GVE    
Sbjct: 43  ----RLEL-----------FEGDEPAPPSGGGGVHLAFEVDDVDAAVERLKAAGVEILGG 87

Query: 151 PDGGKLKG-VAFIKDPDDYWIEI 172
           P      G VA+ +DPD   IE+
Sbjct: 88  PREEPWGGRVAYFRDPDGNLIEL 110

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. Glyoxylase I catalyzes the glutathione-dependent inactivation of toxic methylglyoxal, requiring zinc or nickel ions for activity. The antibiotic resistance proteins in this family use a variety of mechanisms to block the function of antibiotics. Bleomycin resistance protein (BLMA) sequesters bleomycin's activity by directly binding to it. Whereas, three types of fosfomycin resistance proteins employ different mechanisms to render fosfomycin inactive by modifying the fosfomycin molecule. Although the proteins in this superfamily are functionally distinct, their structures are similar. The difference among the three dimensional structures of the three types of proteins in this superfamily is interesting from an evolutionary perspective. Both glyoxalase I and BLMA show domain swapping between subunits. However, there is no domain swapping for type 1 extradiol dioxygenases. Length = 110

>gnl|CDD|223423 COG0346, GloA, Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]

 Score = 59.8 bits (144), Expect = 6e-12
 Identities = 27/142 (19%), Positives = 42/142 (29%), Gaps = 10/142 (7%)

Query: 31  QTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTF 90
                + D + S+DFY+ VLG+ L+K           Y L + D    P + +      F
Sbjct: 5   HVTLAVPDLEASIDFYTDVLGLRLVKDTVNEADDGGGYHLLFLDGDGGPGELLAF----F 60

Query: 91  GKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKK 150
           G                    G   G+                  A    +  GV     
Sbjct: 61  GFEGRAGTGFVGDV-----ALGVPGGDLGLGHLAFEVDDEAFGDAALAFLDPDGVRIELG 115

Query: 151 PDGGKLKGVAFIKDPDDYWIEI 172
              G+     + +DPD   IE+
Sbjct: 116 EP-GRGGVHVYFRDPDGILIEL 136

Length = 138

>gnl|CDD|221708 pfam12681, Glyoxalase_2, Glyoxalase-like domain

 Score = 50.9 bits (122), Expect = 7e-09
 Identities = 24/144 (16%), Positives = 42/144 (29%), Gaps = 39/144 (27%)

Query: 34  FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKP 93
             + D + +  FY  +LG  +                                    G+ 
Sbjct: 1   LPVSDLEAARAFYEELLGFEV--------------------------------EEEDGEY 28

Query: 94  ATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP-- 151
           A   L          +  G    ++   G  H+   VDD+     R +  G    + P  
Sbjct: 29  AEFRLGLVLALGGFIELIGLPEPDAPGGGGVHLYFEVDDLDALVARLKAAGGTILEPPED 88

Query: 152 --DGGKLKGVAFIKDPDDYWIEIF 173
              GG+     +++DPD   IE+ 
Sbjct: 89  TPWGGR---EFYVRDPDGNLIELI 109

This domain is related to the Glyoxalase domain pfam00903. Length = 109

>gnl|CDD|176669 cd07245, Glo_EDI_BRP_like_9, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 44.1 bits (105), Expect = 2e-06
 Identities = 35/142 (24%), Positives = 46/142 (32%), Gaps = 36/142 (25%)

Query: 34  FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVW-TFGK 92
            R+ D + S  FY+ VLG+    R  F        F G                W   G 
Sbjct: 6   LRVPDLEASRAFYTDVLGLEEGPRPPFL-------FPGA---------------WLYAGD 43

Query: 93  PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD 152
              + L      E  PD      G        HI   VDD+     R +  GV +     
Sbjct: 44  GPQLHL----IEEDPPDALPEGPGR-----DDHIAFRVDDLDAFRARLKAAGVPY--TES 92

Query: 153 GGKLKGVA--FIKDPDDYWIEI 172
                GV   F++DPD   IE+
Sbjct: 93  DVPGDGVRQLFVRDPDGNRIEL 114

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases. Length = 114

>gnl|CDD|176706 cd08358, Glo_EDI_BRP_like_21, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 39.2 bits (92), Expect = 2e-04
 Identities = 32/139 (23%), Positives = 51/139 (36%), Gaps = 30/139 (21%)

Query: 34  FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPAD-PVDRTVWTFGK 92
           F++ +   ++ FY  VLGM +L+  +F E        G +   + P D    +T+  +G 
Sbjct: 8   FKVGNRNKTIKFYREVLGMKVLRHEEFEE--------GCKAACNGPYDGKWSKTMIGYGP 59

Query: 93  PAT---IELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAK 149
                 +ELT+N+G         Y  GN     F  I I         ++          
Sbjct: 60  EDDHFVVELTYNYGIGD------YELGND----FLGITIHSKQAVSNAKKHNW------- 102

Query: 150 KPDGGKLKGVAFIKDPDDY 168
            P      GV  +K P  Y
Sbjct: 103 -PVTEVEDGVYEVKAPGGY 120

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 127

>gnl|CDD|211356 cd08346, PcpA_N_like, N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

 Score = 38.7 bits (91), Expect = 3e-04
 Identities = 31/139 (22%), Positives = 53/139 (38%), Gaps = 26/139 (18%)

Query: 37  KDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATI 96
           +D + ++DFY+ VLG+ L+K+    +     Y L + D   +P   +  T + +      
Sbjct: 10  RDAQETVDFYTDVLGLRLVKKTVNQD-DPGTYHLFFGDGLGSPGTLL--TFFEWP----- 61

Query: 97  ELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITV---DDVYKACERFERLGVEFAKKPDG 153
                     D   KG       P    HI  +V     +    ER    GV  +   D 
Sbjct: 62  ----------DAGPKGRR----GPGQIHHIAFSVPSEASLEAWRERLRAAGVPVSGVVDR 107

Query: 154 GKLKGVAFIKDPDDYWIEI 172
              + + F +DPD   +E+
Sbjct: 108 FGERSLYF-EDPDGIRLEL 125

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. Length = 126

>gnl|CDD|211350 cd07249, MMCE, Methylmalonyl-CoA epimerase (MMCE)

 Score = 37.9 bits (89), Expect = 6e-04
 Identities = 37/136 (27%), Positives = 49/136 (36%), Gaps = 31/136 (22%)

Query: 37  KDPKVSLDFYSRVLGMSLLKRLDFP-EMKFSLYFLGYEDTASAPADPVDRTVWTFGKPAT 95
            D + +L FY  VLG+   +R + P E    L FLG  +                     
Sbjct: 9   PDLEAALKFYRDVLGVGPWEREEVPSEQGVRLAFLGLGNV-------------------Q 49

Query: 96  IELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFA----KKP 151
           IEL      + D     +     E  G  HI   VDD+  A  R +  GV       +  
Sbjct: 50  IELIE--PLDDDSPIAKFLEKRGE--GLHHIAFEVDDIDAALARLKAQGVRLLQEGPRIG 105

Query: 152 DGGKLKGVAFIKDPDD 167
            GGK   VAF+  P D
Sbjct: 106 AGGKR--VAFL-HPKD 118

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases. Length = 128

>gnl|CDD|222305 pfam13669, Glyoxalase_4, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily

 Score = 36.9 bits (86), Expect = 0.001
 Identities = 32/136 (23%), Positives = 39/136 (28%), Gaps = 30/136 (22%)

Query: 30  QQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWT 89
                 + D   +  F+  +LG                  LG           VD     
Sbjct: 1   HHIGIVVPDLDAAAAFWVDLLG------------------LGPWGDYRDEPQNVDLAFAR 42

Query: 90  FG--KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEF 147
            G      +EL      ES  D  G         G  HI   VDD+  A  R E  GV  
Sbjct: 43  LGDGPAVEVELIQPLDGESFLDKGGP--------GLHHIAYWVDDLDAAVARLEAQGVRV 94

Query: 148 AKKP--DGGKLKGVAF 161
           A K    G   + VAF
Sbjct: 95  APKGPRAGAAGRRVAF 110

Length = 110

>gnl|CDD|176677 cd07254, Glo_EDI_BRP_like_20, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 35.4 bits (82), Expect = 0.004
 Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 8/66 (12%)

Query: 115 NGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPD----GGKLKGVAFIKDPDD 167
              +   G  H+G+ VD   +V +A  R E  G+   K+ D          V ++ DPD 
Sbjct: 51  RPGAPGGGLNHLGVQVDSAEEVAEAKARAEAAGLPTFKEEDTTCCYAVQDKV-WVTDPDG 109

Query: 168 YWIEIF 173
              E+F
Sbjct: 110 NAWEVF 115

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and types I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping. Length = 120

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	185
PLN02367	233	lactoylglutathione lyase	100.0
PLN03042	185	Lactoylglutathione lyase; Provisional	99.97
KOG2944	170	consensus Glyoxalase [Carbohydrate transport and m	99.95
TIGR00068	150	glyox_I lactoylglutathione lyase. Glyoxylase I is	99.88
cd08353	142	Glo_EDI_BRP_like_7 This conserved domain belongs t	99.87
cd07233	121	Glyoxalase_I Glyoxalase I catalyzes the isomerizat	99.87
TIGR03645	162	glyox_marine lactoylglutathione lyase family prote	99.85
cd08358	127	Glo_EDI_BRP_like_21 This conserved domain belongs	99.85
PRK10291	129	glyoxalase I; Provisional	99.85
cd07241	125	Glo_EDI_BRP_like_3 This conserved domain belongs t	99.84
PRK11478	129	putative lyase; Provisional	99.84
cd08342	136	HPPD_N_like N-terminal domain of 4-hydroxyphenylpy	99.84
PLN02300	286	lactoylglutathione lyase	99.84
cd08352	125	Glo_EDI_BRP_like_1 This conserved domain belongs t	99.83
cd07243	143	2_3_CTD_C C-terminal domain of catechol 2,3-dioxyg	99.81
TIGR03081	128	metmalonyl_epim methylmalonyl-CoA epimerase. Membe	99.8
cd08351	123	ChaP_like ChaP, an enzyme involved in the biosynth	99.79
cd07257	153	THT_oxygenase_C The C-terminal domain of 2,4,5-Tri	99.79
cd07263	119	Glo_EDI_BRP_like_16 This conserved domain belongs	99.79
cd07247	114	SgaA_N_like N-terminal domain of Streptomyces gris	99.78
cd07265	122	2_3_CTD_N N-terminal domain of catechol 2,3-dioxyg	99.78
cd07237	154	BphC1-RGP6_C_like C-terminal domain of 2,3-dihydro	99.78
cd07245	114	Glo_EDI_BRP_like_9 This conserved domain belongs t	99.77
cd09011	120	Glo_EDI_BRP_like_23 This conserved domain belongs	99.77
cd08347	157	PcpA_C_like C-terminal domain of Sphingobium chlor	99.77
cd07255	125	Glo_EDI_BRP_like_12 This conserved domain belongs	99.77
cd08346	126	PcpA_N_like N-terminal domain of Sphingobium chlor	99.76
cd07256	161	HPCD_C_class_II C-terminal domain of 3,4-dihydroxy	99.76
cd07253	125	Glo_EDI_BRP_like_2 This conserved domain belongs t	99.76
cd08355	122	Glo_EDI_BRP_like_14 This conserved domain belongs	99.76
cd08364	131	FosX FosX, a fosfomycin resistance protein, cataly	99.76
cd09013	121	BphC-JF8_N_like N-terminal, non-catalytic, domain	99.76
cd07264	125	Glo_EDI_BRP_like_15 This conserved domain belongs	99.75
PRK04101	139	fosfomycin resistance protein FosB; Provisional	99.75
cd08360	134	MhqB_like_C C-terminal domain of Burkholderia sp.	99.75
cd08363	131	FosB FosB, a fosfomycin resistance protein, cataly	99.75
cd07242	128	Glo_EDI_BRP_like_6 This conserved domain belongs t	99.75
cd07249	128	MMCE Methylmalonyl-CoA epimerase (MMCE). MMCE, als	99.75
cd07252	120	BphC1-RGP6_N_like N-terminal domain of 2,3-dihydro	99.75
cd09014	166	BphC-JF8_C_like C-terminal, catalytic, domain of B	99.75
cd08343	131	ED_TypeI_classII_C C-terminal domain of type I, cl	99.75
cd08354	122	Glo_EDI_BRP_like_13 This conserved domain belongs	99.74
cd08348	134	BphC2-C3-RGP6_C_like The single-domain 2,3-dihydro	99.74
cd07240	117	ED_TypeI_classII_N N-terminal domain of type I, cl	99.74
cd07238	112	Glo_EDI_BRP_like_5 This conserved domain belongs t	99.74
cd08359	119	Glo_EDI_BRP_like_22 This conserved domain belongs	99.73
cd07239	144	BphC5-RK37_C_like C-terminal, catalytic, domain of	99.73
PRK06724	128	hypothetical protein; Provisional	99.73
cd07267	113	THT_Oxygenase_N N-terminal domain of 2,4,5-trihydr	99.73
cd07246	122	Glo_EDI_BRP_like_8 This conserved domain belongs t	99.73
PF00903	128	Glyoxalase: Glyoxalase/Bleomycin resistance protei	99.73
cd09012	124	Glo_EDI_BRP_like_24 This conserved domain belongs	99.72
cd08361	124	PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cuma	99.72
cd07261	114	Glo_EDI_BRP_like_11 This conserved domain belongs	99.72
cd07244	121	FosA FosA, a Fosfomycin resistance protein, cataly	99.72
cd08357	125	Glo_EDI_BRP_like_18 This conserved domain belongs	99.71
cd08362	120	BphC5-RrK37_N_like N-terminal, non-catalytic, doma	99.71
cd07266	121	HPCD_N_class_II N-terminal domain of 3,4-dihydroxy	99.7
PF12681	108	Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B	99.7
cd07235	122	MRD Mitomycin C resistance protein (MRD). Mitomyci	99.7
PLN02300	286	lactoylglutathione lyase	99.7
cd08345	113	Fosfomycin_RP Fosfomycin resistant protein; inhibi	99.7
TIGR03211	303	catechol_2_3 catechol 2,3 dioxygenase. Members of	99.7
cd08344	112	MhqB_like_N N-terminal domain of MhqB, a type I ex	99.69
cd08349	112	BLMA_like Bleomycin binding protein (BLMA) and sim	99.69
cd07254	120	Glo_EDI_BRP_like_20 This conserved domain belongs	99.69
cd07262	123	Glo_EDI_BRP_like_19 This conserved domain belongs	99.69
cd08350	120	BLMT_like BLMT, a bleomycin resistance protein enc	99.68
cd06587	112	Glo_EDI_BRP_like This domain superfamily is found	99.67
cd07258	141	PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cuma	99.67
TIGR02295	294	HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase. T	99.66
cd08356	113	Glo_EDI_BRP_like_17 This conserved domain belongs	99.64
cd07251	121	Glo_EDI_BRP_like_10 This conserved domain belongs	99.64
TIGR03211	303	catechol_2_3 catechol 2,3 dioxygenase. Members of	99.63
TIGR03213	286	23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase	99.63
TIGR02295	294	HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase. T	99.6
TIGR03213	286	23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase	99.57
KOG2943	299	consensus Predicted glyoxalase [Carbohydrate trans	99.56
COG3565	138	Predicted dioxygenase of extradiol dioxygenase fam	99.54
PF13669	109	Glyoxalase_4: Glyoxalase/Bleomycin resistance prot	99.53
COG2514	265	Predicted ring-cleavage extradiol dioxygenase [Gen	99.52
COG3324	127	Predicted enzyme related to lactoylglutathione lya	99.51
cd07250	191	HPPD_C_like C-terminal domain of 4-hydroxyphenylpy	99.42
COG0346	138	GloA Lactoylglutathione lyase and related lyases [	99.3
COG3607	133	Predicted lactoylglutathione lyase [General functi	99.29
TIGR01263	353	4HPPD 4-hydroxyphenylpyruvate dioxygenase. This pr	99.21
KOG2943	299	consensus Predicted glyoxalase [Carbohydrate trans	99.21
cd06588	128	PhnB_like Escherichia coli PhnB and similar protei	99.16
TIGR01263	353	4HPPD 4-hydroxyphenylpyruvate dioxygenase. This pr	99.14
PLN02875	398	4-hydroxyphenylpyruvate dioxygenase	99.01
PRK01037	357	trmD tRNA (guanine-N(1)-)-methyltransferase/unknow	98.99
COG2764	136	PhnB Uncharacterized protein conserved in bacteria	98.97
PF14506	125	CppA_N: CppA N-terminal; PDB: 3E0R_D.	98.63
COG2514	265	Predicted ring-cleavage extradiol dioxygenase [Gen	98.45
COG3185	363	4-hydroxyphenylpyruvate dioxygenase and related he	98.44
PF13468	175	Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B.	98.29
PRK10148	147	hypothetical protein; Provisional	98.22
KOG0638	381	consensus 4-hydroxyphenylpyruvate dioxygenase [Ami	98.1
PLN02875	398	4-hydroxyphenylpyruvate dioxygenase	98.05
PF14696	139	Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, H	97.55
KOG0638	381	consensus 4-hydroxyphenylpyruvate dioxygenase [Ami	96.75
PF15067	236	FAM124: FAM124 family	96.59
PF06983	116	3-dmu-9_3-mt: 3-demethylubiquinone-9 3-methyltrans	96.41
PF13669	109	Glyoxalase_4: Glyoxalase/Bleomycin resistance prot	96.4
PF14507	101	CppA_C: CppA C-terminal; PDB: 3E0R_D.	96.03
KOG2944	170	consensus Glyoxalase [Carbohydrate transport and m	95.2
cd08353	142	Glo_EDI_BRP_like_7 This conserved domain belongs t	94.97
TIGR03645	162	glyox_marine lactoylglutathione lyase family prote	94.27
cd08352	125	Glo_EDI_BRP_like_1 This conserved domain belongs t	93.6
COG3185	363	4-hydroxyphenylpyruvate dioxygenase and related he	93.55
cd08346	126	PcpA_N_like N-terminal domain of Sphingobium chlor	93.36
cd07242	128	Glo_EDI_BRP_like_6 This conserved domain belongs t	92.6
cd07249	128	MMCE Methylmalonyl-CoA epimerase (MMCE). MMCE, als	92.3
cd07245	114	Glo_EDI_BRP_like_9 This conserved domain belongs t	91.37
PRK11478	129	putative lyase; Provisional	91.33
PF13468	175	Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B.	91.22
cd06587	112	Glo_EDI_BRP_like This domain superfamily is found	90.78
cd08347	157	PcpA_C_like C-terminal domain of Sphingobium chlor	90.73
PLN02367	233	lactoylglutathione lyase	90.48
cd08342	136	HPPD_N_like N-terminal domain of 4-hydroxyphenylpy	90.39
cd07263	119	Glo_EDI_BRP_like_16 This conserved domain belongs	90.21
cd07235	122	MRD Mitomycin C resistance protein (MRD). Mitomyci	89.68
cd07268	149	Glo_EDI_BRP_like_4 This conserved domain belongs t	89.57
PF12681	108	Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B	89.5
cd07233	121	Glyoxalase_I Glyoxalase I catalyzes the isomerizat	89.36
cd07241	125	Glo_EDI_BRP_like_3 This conserved domain belongs t	89.33
PRK11700	187	hypothetical protein; Provisional	89.13
cd07237	154	BphC1-RGP6_C_like C-terminal domain of 2,3-dihydro	89.13
TIGR03081	128	metmalonyl_epim methylmalonyl-CoA epimerase. Membe	88.75
PF13670	83	PepSY_2: Peptidase propeptide and YPEB domain This	88.7
PF06185	185	YecM: YecM protein; InterPro: IPR010393 This famil	88.62
PRK10291	129	glyoxalase I; Provisional	88.54
PLN03042	185	Lactoylglutathione lyase; Provisional	87.5
cd07255	125	Glo_EDI_BRP_like_12 This conserved domain belongs	86.82
cd08358	127	Glo_EDI_BRP_like_21 This conserved domain belongs	86.73
cd07253	125	Glo_EDI_BRP_like_2 This conserved domain belongs t	86.51
PF00903	128	Glyoxalase: Glyoxalase/Bleomycin resistance protei	85.49
cd08348	134	BphC2-C3-RGP6_C_like The single-domain 2,3-dihydro	85.31
cd07250	191	HPPD_C_like C-terminal domain of 4-hydroxyphenylpy	85.14
cd08344	112	MhqB_like_N N-terminal domain of MhqB, a type I ex	84.61
cd08360	134	MhqB_like_C C-terminal domain of Burkholderia sp.	83.04
cd07252	120	BphC1-RGP6_N_like N-terminal domain of 2,3-dihydro	82.47
TIGR00068	150	glyox_I lactoylglutathione lyase. Glyoxylase I is	81.21
cd07238	112	Glo_EDI_BRP_like_5 This conserved domain belongs t	81.08
cd08359	119	Glo_EDI_BRP_like_22 This conserved domain belongs	80.93
cd04895	72	ACT_ACR_1 ACT domain-containing protein which is c	80.47
cd07257	153	THT_oxygenase_C The C-terminal domain of 2,4,5-Tri	80.18
cd07247	114	SgaA_N_like N-terminal domain of Streptomyces gris	80.04

>PLN02367 lactoylglutathione lyase

Probab=100.00  E-value=6e-33  Score=213.54  Aligned_cols=181  Identities=86%  Similarity=1.423  Sum_probs=156.5

Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCceeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCc
Q 029933            4 SEPKESPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPV   83 (185)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (185)
                      ..++.....+++++..|.+.+.++.++|++|+|+|+++|++||+++|||++..+..+++.++.++|+++++....+.+..
T Consensus        51 ~~~~~~~~~~~~~~~~~~~~t~~~~~~HtmlRVkDle~Sl~FYt~vLGm~ll~r~d~pe~~f~lyFL~~~~~~~~p~d~~  130 (233)
T PLN02367         51 SEPKESPANNPGLSTSPDEATKGYIMQQTMYRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTASAPTDPT  130 (233)
T ss_pred             cCCccCcccCcccccCCCCCCCCcEEEEEEEEeCCHHHHHHHHHHhcCCEEeEEEecCCCcEEEEEeecCCccccccccc
Confidence            67788888999999999999999999999999999999999999999999999888888889999998866544455555


Q ss_pred             cceeeecCCCcEEEEeecCCCCCCCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCEEeecCCCCccceEEEEE
Q 029933           84 DRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIK  163 (185)
Q Consensus        84 ~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~  163 (185)
                      .|.+|...+...|||.++++.+.++....|..++..+.|++||||.|+|+++++++|+++|+++...|..+.+.+.+||+
T Consensus       131 ~r~~~~~~~~~~LELt~n~g~e~~~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~erL~a~Gv~~v~~P~~g~~~riaFIk  210 (233)
T PLN02367        131 ERTVWTFGQKATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFEELGVEFVKKPNDGKMKGIAFIK  210 (233)
T ss_pred             cceeeccCCCCEEEEecCCCCCccccchhcccCCCCCCCceEEEEEcCCHHHHHHHHHHCCCEEEeCCccCCceEEEEEE
Confidence            68889988888999999888765444445777766667999999999999999999999999999888776656688999


Q ss_pred             CCCCcEEEEeecCccccccCC
Q 029933          164 DPDDYWIEIFDLKTIGKIGGS  184 (185)
Q Consensus       164 DPdG~~iEl~~~~~~~~~~~~  184 (185)
                      |||||+|||++......+.+|
T Consensus       211 DPDGn~IEL~e~~~~~~~~~~  231 (233)
T PLN02367        211 DPDGYWIEIFDLKTIGTTTVN  231 (233)
T ss_pred             CCCCCEEEEEecccccccccc
Confidence            999999999999987777665

>PLN03042 Lactoylglutathione lyase; Provisional

Probab=99.97  E-value=1e-29  Score=191.48  Aligned_cols=179  Identities=84%  Similarity=1.398  Sum_probs=141.5

Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCceeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCc
Q 029933            4 SEPKESPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPV   83 (185)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (185)
                      +++|.+|.+++|+.+|++..+.+++++|++|+|+|+++|++||+++|||++..+...+...+..++++++.....++++.
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Ht~i~V~Dle~Si~FY~~vLG~~~~~r~~~~~~~~~~~fl~~~~~~~~~~~~~   82 (185)
T PLN03042          3 SASKESAANNPGLCGNPDEATKGYIMQQTMFRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDSETAPTDPP   82 (185)
T ss_pred             CCCcCCcccCcccccCCCCCCCCcEEEEEEEeeCCHHHHHHHHHhhcCCEEEEEEEcCCCceEEEEEecCCcccCCcchh
Confidence            46799999999999999999999999999999999999999999999999988876666678888887654332334444


Q ss_pred             cceeeecCCCcEEEEeecCCCCCCCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCEEeecCCCCccceEEEEE
Q 029933           84 DRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIK  163 (185)
Q Consensus        84 ~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~  163 (185)
                      ....|.+.+...|||+++.+....+....+..+.....|+.||+|.|+|+++++++|+++|+++...|..+...+.+||+
T Consensus        83 ~~~~~l~~~~~~lEL~~~~~~~~~p~~~~~~~~~~~~~G~~Hlaf~V~Dvd~~~~~L~~~Gv~v~~~p~~~~~~~~~fi~  162 (185)
T PLN03042         83 ERTVWTFGRKATIELTHNWGTESDPEFKGYHNGNSDPRGFGHIGITVDDVYKACERFEKLGVEFVKKPDDGKMKGLAFIK  162 (185)
T ss_pred             hcccccccCCCEEEEEEcCCCcccccccccccCCCCCCCccEEEEEcCCHHHHHHHHHHCCCeEEeCCccCCceeEEEEE
Confidence            56677777788999998765432221111333333335889999999999999999999999999777654444578899


Q ss_pred             CCCCcEEEEeecCcccccc
Q 029933          164 DPDDYWIEIFDLKTIGKIG  182 (185)
Q Consensus       164 DPdG~~iEl~~~~~~~~~~  182 (185)
                      |||||+|||++...-.-|+
T Consensus       163 DPdG~~IEl~e~~~~~~~~  181 (185)
T PLN03042        163 DPDGYWIEIFDLKRIGGIT  181 (185)
T ss_pred             CCCCCEEEEEECCCchhhc
Confidence            9999999999988755444

>KOG2944 consensus Glyoxalase [Carbohydrate transport and metabolism]

Probab=99.95  E-value=2.5e-27  Score=168.80  Aligned_cols=167  Identities=55%  Similarity=0.896  Sum_probs=148.3

Q ss_pred             CCCCCCCCCCCCCCCCCceeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceee
Q 029933            9 SPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVW   88 (185)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (185)
                      ++++++++.....+.+.++++.|++++|+|+.+|..||.+++|+.+.....+.+..+..+++++......|..+..+..|
T Consensus         3 s~~~~~~l~~~~~~~~~t~~~~~t~~rvkd~~~Sl~fytr~~gm~l~~~~~fke~~Fsl~fL~~~~~~~vP~~~~~~~v~   82 (170)
T KOG2944|consen    3 SDANALGLFSRADSSTPTYLLQQTMLRVKDPTGSLKFYTRVNGMALLVPDDFKEAKFSLYFLGAEVSEDVPKPEHGVSVF   82 (170)
T ss_pred             ccccchhhhcccCCCCchhhhhhceeecccchhhhhhhhhhccceeechhhhhHhhhHHHhhcccccccCccCCCCCceE
Confidence            45588888888888999999999999999999999999999999988876777777888888887666677777777799


Q ss_pred             ecCCCcEEEEeecCCCCCCCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCEEeecCCCCccceEEEEECCCCc
Q 029933           89 TFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDY  168 (185)
Q Consensus        89 ~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~  168 (185)
                      ...++..+||.++++.+.++.. .|..|+..++|++||||.|+|++.+.++|+++|+++...+.+|.+...+|+.||||+
T Consensus        83 ~~~~~~~~ELthn~Gtes~~~~-~~~ngN~~prGfgHIci~V~di~sac~~lkekGV~f~Kk~~dGk~K~iaF~~dpDgy  161 (170)
T KOG2944|consen   83 VFSRNAKLELTHNWGTESPPDQ-AYLNGNKEPRGFGHICIEVDDINSACERLKEKGVRFKKKLKDGKMKPIAFLHDPDGY  161 (170)
T ss_pred             EecccCceeeecCCCCCCCcch-hhcCCCCCCCccceEEEEeCCHHHHHHHHHHhCceeeecCCCccccceeEEECCCCC
Confidence            9999999999999999876633 488888888999999999999999999999999999999999988788999999999


Q ss_pred             EEEEeecC
Q 029933          169 WIEIFDLK  176 (185)
Q Consensus       169 ~iEl~~~~  176 (185)
                      +|||+...
T Consensus       162 wiei~~~s  169 (170)
T KOG2944|consen  162 WIEIELES  169 (170)
T ss_pred             eEEEeecC
Confidence            99998654

>TIGR00068 glyox_I lactoylglutathione lyase

Probab=99.88  E-value=4e-21  Score=140.33  Aligned_cols=139  Identities=53%  Similarity=0.877  Sum_probs=100.4

Q ss_pred             CCCCCCceeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEe
Q 029933           20 RDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELT   99 (185)
Q Consensus        20 ~~~~~~~~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~   99 (185)
                      ..|.+..++++|+.|.|+|++++++||+++|||++..+...+...+..++++.++..               ....+++.
T Consensus         9 ~~~~~~~~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~l~~~   73 (150)
T TIGR00068         9 ADPKTKKRRLLHTMLRVGDLDKSLDFYTEVLGMKLLRKRDFPEMKFSLAFLGYGDET---------------SAAVIELT   73 (150)
T ss_pred             cCcccCCceEEEEEEEecCHHHHHHHHHHhcCCEEEEEeccCCCceEEEEecCCCCC---------------CccEEEEe
Confidence            346677789999999999999999999999999987764444444455666543210               02345554


Q ss_pred             ecCCCCCCCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCEEeecCC--CCccceEEEEECCCCcEEEEeecCc
Q 029933          100 HNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD--GGKLKGVAFIKDPDDYWIEIFDLKT  177 (185)
Q Consensus       100 ~~~~~~~~~~~~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~~--~~~~~~~~~~~DPdG~~iEl~~~~~  177 (185)
                      .......      ...+    .+..|++|.|+|+++++++|.++|+++..++.  .+...+.+||+|||||.|||++..+
T Consensus        74 ~~~~~~~------~~~~----~g~~hi~f~v~dld~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~  143 (150)
T TIGR00068        74 HNWGTEK------YDLG----NGFGHIAIGVDDVYKACERVRALGGNVVREPGPVKGGTTVIAFVEDPDGYKIELIQRKS  143 (150)
T ss_pred             ecCCCCc------ccCC----CceeEEEEecCCHHHHHHHHHHcCCccccCCcccCCCceEEEEEECCCCCEEEEEECCc
Confidence            3222111      1111    26789999999999999999999999887663  3333457889999999999999988


Q ss_pred             cccccC
Q 029933          178 IGKIGG  183 (185)
Q Consensus       178 ~~~~~~  183 (185)
                      -++-||
T Consensus       144 ~~~~~~  149 (150)
T TIGR00068       144 TKDGLG  149 (150)
T ss_pred             hhhhcc
Confidence            777665

Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits this model twice.

>cd08353 Glo_EDI_BRP_like_7 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.87  E-value=1.8e-20  Score=135.27  Aligned_cols=127  Identities=17%  Similarity=0.296  Sum_probs=89.0

Q ss_pred             eEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCC-----------CceEEEeeccCCCCCCCCCCccceeeecCCCcEE
Q 029933           28 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE-----------MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATI   96 (185)
Q Consensus        28 ~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   96 (185)
                      +++|++|.|+|++++++||++ |||++..+...++           ......++..+                 .+...+
T Consensus         3 ~i~Hi~i~v~Dl~~s~~FY~~-LG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~-----------------~g~~~i   64 (142)
T cd08353           3 RMDNVGIVVRDLEAAIAFFLE-LGLELEGRAEIEGEWADRVTGLDGVRVEIAMLRTP-----------------DGHSRL   64 (142)
T ss_pred             eeeeEEEEeCCHHHHHHHHHH-cCCEEccccccChHHHHHhcCCCCceEEEEEEeCC-----------------CCCceE
Confidence            799999999999999999998 9998876533221           11222333221                 125688


Q ss_pred             EEeecCCCCCCCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCEEeecCCCC-ccceEEEEECCCCcEEEEeec
Q 029933           97 ELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGG-KLKGVAFIKDPDDYWIEIFDL  175 (185)
Q Consensus        97 ~l~~~~~~~~~~~~~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~~~~-~~~~~~~~~DPdG~~iEl~~~  175 (185)
                      +|+............ .  ......++.||||.|+|+++++++|+++|+++..++... ...+.+|++||||+.|||+|.
T Consensus        65 el~~~~~~~~~~~~~-~--~~~~~~g~~hia~~v~d~d~~~~~l~~~G~~~~~~~~~~~~~~r~~~~~DPdG~~iEl~e~  141 (142)
T cd08353          65 ELSKFHHPAVIADHR-P--APVNALGLRRVMFAVDDIDARVARLRKHGAELVGEVVQYENSYRLCYIRGPEGILIELAEQ  141 (142)
T ss_pred             EEEEecCCCCcCcCC-C--CCCCCCCceEEEEEeCCHHHHHHHHHHCCCceeCCceecCCCeEEEEEECCCCCEEEeeec
Confidence            888754332211100 1  011234788999999999999999999999998766433 334679999999999999985

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd07233 Glyoxalase_I Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

Probab=99.87  E-value=2.6e-20  Score=130.27  Aligned_cols=121  Identities=60%  Similarity=1.107  Sum_probs=90.6

Q ss_pred             EEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCCC
Q 029933           29 MQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDP  108 (185)
Q Consensus        29 i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~  108 (185)
                      |.|++|.|+|++++++||+++||+++..+...++..+..+++..+...               +...+++........  
T Consensus         1 ~~hv~i~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~---------------~~~~~~l~~~~~~~~--   63 (121)
T cd07233           1 FLHTMLRVKDLEKSLDFYTDVLGMKLLRRKDFPEGKFTLVFLGYPDED---------------SEGVLELTYNWGTEE--   63 (121)
T ss_pred             CeeEEEEecCcHHHHHHHHhccCCeEEEEEecCCCceEEEEecCCCCC---------------CccEEEEEecCCCCC--
Confidence            579999999999999999999999988765544445566677653210               034666654322211  


Q ss_pred             CCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCEEeecCCCCccceEEEEECCCCcEEEEe
Q 029933          109 DFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIF  173 (185)
Q Consensus       109 ~~~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~  173 (185)
                         +...+    .+..|++|.|+|+++++++++++|+++..+|.....++.+||+|||||+|||+
T Consensus        64 ---~~~~~----~~~~~i~~~v~did~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DpdG~~iE~~  121 (121)
T cd07233          64 ---PYDNG----NGFGHLAFAVDDVYAACERLEEMGVEVTKPPGDGGMKGIAFIKDPDGYWIELI  121 (121)
T ss_pred             ---CcCCC----CCeEEEEEEeCCHHHHHHHHHHCCCEEeeCCccCCCceEEEEECCCCCEEEeC
Confidence               12111    26689999999999999999999999998887665556789999999999985

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic gly

>TIGR03645 glyox_marine lactoylglutathione lyase family protein

Probab=99.85  E-value=8.2e-20  Score=135.26  Aligned_cols=127  Identities=21%  Similarity=0.222  Sum_probs=86.8

Q ss_pred             eEEEEEEEeCChHHHHHHHHHhcCCEEeeee----ec--------------CCCceEEEeeccCCCCCCCCCCccceeee
Q 029933           28 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRL----DF--------------PEMKFSLYFLGYEDTASAPADPVDRTVWT   89 (185)
Q Consensus        28 ~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~----~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (185)
                      +++|++|.|+|+++|++||+++|||++..+.    ..              ....+.+.++..++               
T Consensus         4 ~i~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~---------------   68 (162)
T TIGR03645         4 TFSHIGISVPDLDAAVKFYTEVLGWYLIMPPTEIVEDDSAIGEMCTDVFGEGWGSFKIAHLSTGD---------------   68 (162)
T ss_pred             eEEEEEEEeCCHHHHHHHHHHhcCCEEEeccccccCCCCCCCchhhHHhCCCcceeeEEEEecCC---------------
Confidence            7999999999999999999999999876421    00              00113334443221               


Q ss_pred             cCCCcEEEEeecCCCCCCCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCEEeec-CC---CCc-cceEEEEEC
Q 029933           90 FGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKK-PD---GGK-LKGVAFIKD  164 (185)
Q Consensus        90 ~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~-~~---~~~-~~~~~~~~D  164 (185)
                         +..++|+...+.....     ........++.|+||.|+|+++++++|+++|+++... +.   .+. ..+.+||+|
T Consensus        69 ---~~~ieL~~~~~~~~~~-----~~~~~~~~g~~Hla~~v~dida~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~D  140 (162)
T TIGR03645        69 ---RIGVELFEFKNQENPE-----DNFEYWKTGVFHFCVQDPDVEGLAERIVAAGGKKRMPVPRYYYPGEKPYRMIYMED  140 (162)
T ss_pred             ---CCcEEEEeccCCCCCC-----cccccccccceEEEEEcCCHHHHHHHHHHcCCcccCCCccccCCCCCceEEEEEEC
Confidence               4568888765432211     0000112478999999999999999999999876443 22   111 125799999


Q ss_pred             CCCcEEEEeecCc
Q 029933          165 PDDYWIEIFDLKT  177 (185)
Q Consensus       165 PdG~~iEl~~~~~  177 (185)
                      ||||+|||+++..
T Consensus       141 PdG~~iEl~~~~~  153 (162)
T TIGR03645       141 PFGNILEIYSHSY  153 (162)
T ss_pred             CCCCEEEEEEcCh
Confidence            9999999999875

Members of this protein family share homology with lactoylglutathione lyase (glyoxalase I) and are found mainly in marine members of the gammaproteobacteria, including CPS_0532 from Colwellia psychrerythraea 34H. This family excludes a well-separated, more narrowly distributed paralogous family, exemplified by CPS_3492 from C. psychrerythraea. The function is of this protein family is unknown.

>cd08358 Glo_EDI_BRP_like_21 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.85  E-value=1.5e-19  Score=128.35  Aligned_cols=115  Identities=29%  Similarity=0.498  Sum_probs=83.8

Q ss_pred             eeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCC-----------CceEEEeeccCCCCCCCCCCccceeeecCCCcE
Q 029933           27 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE-----------MKFSLYFLGYEDTASAPADPVDRTVWTFGKPAT   95 (185)
Q Consensus        27 ~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   95 (185)
                      +++.|++|.|+|+++|++||+++|||++.++..+++           +.+..+++++...               ..+..
T Consensus         1 ~~~~Hv~irV~DlerSi~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~---------------~~~~~   65 (127)
T cd08358           1 RRALHFVFKVGNRNKTIKFYREVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMIGYGPE---------------DDHFV   65 (127)
T ss_pred             CceEEEEEEeCCHHHHHHHHHHhcCCEEEeeecCccccccccccCCCCcEEEEEEecCCC---------------CCccE
Confidence            378999999999999999999999999887665544           4444455654211               01568


Q ss_pred             EEEeecCCCCCCCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCEEeecCCCCccceEEEEECCCCcEEEEee
Q 029933           96 IELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFD  174 (185)
Q Consensus        96 l~l~~~~~~~~~~~~~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~  174 (185)
                      +||.++++...      +..|.    +  |++|.|++. ++.++|+++|+++...+.     ..+|++||||++|||+.
T Consensus        66 lEL~~n~~~~~------~~~g~----~--~~hlav~~~-d~~~~l~~~Gv~~~~~~~-----~~~fi~DPDG~~ie~~~  126 (127)
T cd08358          66 VELTYNYGIGD------YELGN----D--FLGITIHSK-QAVSNAKKHNWPVTEVED-----GVYEVKAPGGYKFYLID  126 (127)
T ss_pred             EEeEecCCCCC------CCCCC----C--EEEEEEECH-HHHHHHHHCCCceecCCC-----CEEEEECCCCCEEEEec
Confidence            99987765432      44332    3  566666665 556999999999887664     15899999999999985

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>PRK10291 glyoxalase I; Provisional

Probab=99.85  E-value=9.8e-20  Score=129.52  Aligned_cols=120  Identities=41%  Similarity=0.761  Sum_probs=86.2

Q ss_pred             EEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCCCCCCC
Q 029933           33 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKG  112 (185)
Q Consensus        33 ~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~  112 (185)
                      +|.|+|++++++||+++|||++..+...+...+..+++..++..               ....+++...+...      +
T Consensus         1 ~l~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~l~~~~~~~------~   59 (129)
T PRK10291          1 MLRVGDLQRSIDFYTNVLGMKLLRTSENPEYKYSLAFVGYGPET---------------EEAVIELTYNWGVD------K   59 (129)
T ss_pred             CEEecCHHHHHHHHHhccCCEEEEeecCCCCcEEEEEEccCCCC---------------CcceEEeeecCCCC------C
Confidence            47899999999999999999988765545555667777653210               02345665432211      1


Q ss_pred             CCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCEEeecCCCC--ccceEEEEECCCCcEEEEeecCc
Q 029933          113 YHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGG--KLKGVAFIKDPDDYWIEIFDLKT  177 (185)
Q Consensus       113 ~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~~~~--~~~~~~~~~DPdG~~iEl~~~~~  177 (185)
                      +..+    .++.||||.|+|+++++++|+++|+++...+...  ...+.+||+|||||.|||++..+
T Consensus        60 ~~~g----~~~~hlaf~V~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~i~DPdG~~iel~~~~~  122 (129)
T PRK10291         60 YELG----TAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKD  122 (129)
T ss_pred             CcCC----CCeeEEEEEeCCHHHHHHHHHHcCCccccCCcccCCCceEEEEEECCCCCEEEEEEccc
Confidence            2222    2678999999999999999999999988655322  22246789999999999999775

>cd07241 Glo_EDI_BRP_like_3 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.84  E-value=9.5e-20  Score=127.86  Aligned_cols=121  Identities=24%  Similarity=0.332  Sum_probs=84.2

Q ss_pred             eEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCC
Q 029933           28 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESD  107 (185)
Q Consensus        28 ~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~  107 (185)
                      +++|++|.|+|++++++||+++|||++......+...+..+|+..++                  ...++++........
T Consensus         1 ~~~Hi~l~v~dl~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~l~~~~~~~~~   62 (125)
T cd07241           1 KIEHVAIWTKDLERMKAFYVTYFGATSNEKYHNPRKGFESYFLSFDD------------------GARLELMTRPDIAPS   62 (125)
T ss_pred             CceEEEEEecCHHHHHHHHHHHhCCEeeceEeCCCCCceEEEEecCC------------------CcEEEEEcCcccCCC
Confidence            57899999999999999999999999865433223334445555432                  346777643221110


Q ss_pred             CCCCCCCCCCCCCCCceEEEEEeC---CHHHHHHHHHhcCCEEeecCCCCcc-ceEEEEECCCCcEEEEe
Q 029933          108 PDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDGGKL-KGVAFIKDPDDYWIEIF  173 (185)
Q Consensus       108 ~~~~~~~~~~~~~~g~~hi~~~v~---dv~~~~~~l~~~G~~~~~~~~~~~~-~~~~~~~DPdG~~iEl~  173 (185)
                           .  ......++.||||.|+   ++++++++|+++|+++..+|..... .+.++++|||||+|||.
T Consensus        63 -----~--~~~~~~g~~hi~f~v~~~~~v~~~~~~l~~~g~~~~~~~~~~~~g~~~~~~~DPdG~~iE~~  125 (125)
T cd07241          63 -----P--NEGERTGWAHLAFSVGSKEAVDELTERLRADGYLIIGEPRTTGDGYYESVILDPEGNRIEIT  125 (125)
T ss_pred             -----c--ccCCCCceEEEEEECCCHHHHHHHHHHHHHCCCEEEeCceecCCCeEEEEEECCCCCEEEeC
Confidence                 0  0112237789999996   4899999999999999886643322 34578999999999983

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>PRK11478 putative lyase; Provisional

Probab=99.84  E-value=1.5e-19  Score=128.02  Aligned_cols=122  Identities=23%  Similarity=0.291  Sum_probs=83.4

Q ss_pred             eEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCC-CceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCC
Q 029933           28 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE-MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  106 (185)
Q Consensus        28 ~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~  106 (185)
                      +++|++|.|+|++++++||+++|||++..+...+. ..|... +..+                  +...++++.......
T Consensus         6 ~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~-~~~~------------------~~~~l~l~~~~~~~~   66 (129)
T PRK11478          6 QVHHIAIIATDYAVSKAFYCDILGFTLQSEVYREARDSWKGD-LALN------------------GQYVIELFSFPFPPE   66 (129)
T ss_pred             eecEEEEEcCCHHHHHHHHHHHhCCEecccccccccccceee-EecC------------------CCcEEEEEEecCCCC
Confidence            68999999999999999999999999875421111 122111 1111                  145677765322211


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCEEeecCCCC-ccceEEEEECCCCcEEEEeec
Q 029933          107 DPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGG-KLKGVAFIKDPDDYWIEIFDL  175 (185)
Q Consensus       107 ~~~~~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~~~~-~~~~~~~~~DPdG~~iEl~~~  175 (185)
                      .+       ......++.||+|.|+|+++++++|+++|+++...+... .+.+.+||+|||||.|||++.
T Consensus        67 ~~-------~~~~~~g~~hi~f~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iEl~~~  129 (129)
T PRK11478         67 RP-------SRPEACGLRHLAFSVDDIDAAVAHLESHNVKCEAIRVDPYTQKRFTFFNDPDGLPLELYEQ  129 (129)
T ss_pred             CC-------CCCCCCceeEEEEEeCCHHHHHHHHHHcCCeeeccccCCCCCCEEEEEECCCCCEEEEEeC
Confidence            11       011223678999999999999999999999987543222 334578999999999999873

>cd08342 HPPD_N_like N-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HPPD) and hydroxymandelate Synthase (HmaS)

Probab=99.84  E-value=7e-20  Score=131.66  Aligned_cols=125  Identities=18%  Similarity=0.192  Sum_probs=87.9

Q ss_pred             EEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCCC
Q 029933           29 MQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDP  108 (185)
Q Consensus        29 i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~  108 (185)
                      |+|+.|.|+|++++++||+++|||++..+....  .....++..+                   ...+++........  
T Consensus         1 ~~Hi~i~V~D~e~s~~FY~~vLGf~~~~~~~~~--~~~~~~~~~g-------------------~~~l~l~~~~~~~~--   57 (136)
T cd08342           1 FDHVEFYVGNAKQLASWFSTKLGFEPVAYHGSE--DKASYLLRQG-------------------DINFVLNSPLNSFA--   57 (136)
T ss_pred             CeEEEEEeCCHHHHHHHHHHhcCCeEEEecCCC--ceEEEEEEcC-------------------CEEEEEecCCCCCC--
Confidence            589999999999999999999999988764321  1122333221                   34555543211111  


Q ss_pred             CCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCEEeecCCC-CccceEEEEECCCCcEEEEeecCcc
Q 029933          109 DFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDG-GKLKGVAFIKDPDDYWIEIFDLKTI  178 (185)
Q Consensus       109 ~~~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~~~-~~~~~~~~~~DPdG~~iEl~~~~~~  178 (185)
                      ....+.  .....+..||+|.|+|+++++++|+++|+++..+|.. .+..+.+|++||||++|||+++..+
T Consensus        58 ~~~~~~--~~~~~g~~hia~~V~Dvda~~~~l~~~G~~v~~~p~~~~~~~~~~~i~dp~G~~ie~~~~~~~  126 (136)
T cd08342          58 PVADFL--EKHGDGVCDVAFRVDDAAAAYERAVARGAKPVQEPVEEPGELKIAAIKGYGDSLHTLVDRKGY  126 (136)
T ss_pred             chHHHH--HhcCCceEEEEEEeCCHHHHHHHHHHcCCeEccCceecCCeEEEEEEeccCCcEEEEEecCCC
Confidence            000000  0112367899999999999999999999999998877 3444689999999999999997764

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of HPP to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two, instead of three, su

>PLN02300 lactoylglutathione lyase

Probab=99.84  E-value=4.2e-19  Score=142.70  Aligned_cols=142  Identities=34%  Similarity=0.569  Sum_probs=99.6

Q ss_pred             CCCCCCCCCCCCCCCCceeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeee
Q 029933           10 PANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWT   89 (185)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (185)
                      .++.--...+|....  .++.|++|.|+|++++++||+++|||++..+...+...+..+++..+...             
T Consensus         8 ~~~~~~~~~~~~~~i--~~l~Hv~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~-------------   72 (286)
T PLN02300          8 AAEAEDLLEWPKKDK--RRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPED-------------   72 (286)
T ss_pred             ChhhhhhhcCCcccc--ceEEEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCcEEEEEEccCCCC-------------
Confidence            333333446754433  38999999999999999999999999988765444445556666543210             


Q ss_pred             cCCCcEEEEeecCCCCCCCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCEEeecCCCCcc--ceEEEEECCCC
Q 029933           90 FGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKL--KGVAFIKDPDD  167 (185)
Q Consensus        90 ~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~~~~~~--~~~~~~~DPdG  167 (185)
                        .+..+++....+...      ...    ..++.|++|.|+|+++++++++++|+++...+.....  .+.+||+||||
T Consensus        73 --~~~~lel~~~~~~~~------~~~----~~g~~hia~~v~dvd~~~~~l~~~G~~i~~~~~~~~~g~~~~~~~~DPdG  140 (286)
T PLN02300         73 --SNFVVELTYNYGVDK------YDI----GTGFGHFGIAVEDVAKTVELVKAKGGKVTREPGPVKGGKSVIAFVKDPDG  140 (286)
T ss_pred             --CceEEEEeccCCCCc------ccc----CCCccEEEEEeCCHHHHHHHHHHCCCeeecCCcccCCCceEEEEEECCCC
Confidence              034566654322211      111    1377899999999999999999999999877644322  34689999999


Q ss_pred             cEEEEeecCcc
Q 029933          168 YWIEIFDLKTI  178 (185)
Q Consensus       168 ~~iEl~~~~~~  178 (185)
                      |.|||+++...
T Consensus       141 ~~iEl~~~~~~  151 (286)
T PLN02300        141 YKFELIQRGPT  151 (286)
T ss_pred             CEEEEEeCCCC
Confidence            99999997654

>cd08352 Glo_EDI_BRP_like_1 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.83  E-value=7.6e-19  Score=122.98  Aligned_cols=121  Identities=23%  Similarity=0.343  Sum_probs=84.8

Q ss_pred             eEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCC-CceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCC
Q 029933           28 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE-MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  106 (185)
Q Consensus        28 ~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~  106 (185)
                      +++|++|.|.|++++++||+++|||++.......+ ..+.+ .+..++                  ...++++.......
T Consensus         3 ~~~hi~l~v~d~~~a~~fy~~~lG~~~~~~~~~~~~~~~~~-~~~~~~------------------~~~i~l~~~~~~~~   63 (125)
T cd08352           3 GIHHVAIICSDYEKSKEFYVEILGFKVIREVYRPERGSYKL-DLLLNG------------------GYQLELFSFPNPPE   63 (125)
T ss_pred             ccceEEEEcCCHHHHHHHHHHhcCCEEeeeeecCCCCcEEE-EEecCC------------------CcEEEEEEcCCCCC
Confidence            68999999999999999999999999876532222 23322 222111                  34666654322211


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCEEeecCCCC-ccceEEEEECCCCcEEEEee
Q 029933          107 DPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGG-KLKGVAFIKDPDDYWIEIFD  174 (185)
Q Consensus       107 ~~~~~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~~~~-~~~~~~~~~DPdG~~iEl~~  174 (185)
                      ..    .   .....++.|++|.|+|+++++++++++|+++...+... ...+.+|++||+||.|||+|
T Consensus        64 ~~----~---~~~~~g~~h~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DP~G~~iEl~~  125 (125)
T cd08352          64 RP----S---YPEACGLRHLAFSVEDIEAAVKHLKAKGVEVEPIRVDEFTGKRFTFFYDPDGLPLELYE  125 (125)
T ss_pred             CC----C---CCcCCCceEEEEEeCCHHHHHHHHHHcCCccccccccCCCceEEEEEECCCCCEEEecC
Confidence            00    0   11223778999999999999999999999988766432 33457899999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07243 2_3_CTD_C C-terminal domain of catechol 2,3-dioxygenase

Probab=99.81  E-value=3.8e-18  Score=123.84  Aligned_cols=114  Identities=17%  Similarity=0.183  Sum_probs=79.6

Q ss_pred             eEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCc-eEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCC
Q 029933           28 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMK-FSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  106 (185)
Q Consensus        28 ~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~  106 (185)
                      +|+|++|.|+|++++++||+++|||++..+...+++. ....|+..+..                 ...+.+...     
T Consensus         6 ~l~Hv~l~v~Dle~s~~FY~~vLGf~~~~~~~~~~~~~~~~~~l~~~~~-----------------~h~~~~~~~-----   63 (143)
T cd07243           6 RLDHCLLTGEDIAETTRFFTDVLDFYLAERVVDPDGGTRVGSFLSCSNK-----------------PHDIAFVGG-----   63 (143)
T ss_pred             eeCEEEEecCCHHHHHHHHHHhcCCEEEEEEecCCCCeEEEEEEecCCC-----------------cceEEEecC-----
Confidence            7999999999999999999999999987664322221 12334432110                 222333110     


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEeCCHHH---HHHHHHhcCCEEeecCCCCc--cceEEEEECCCCcEEEEeec
Q 029933          107 DPDFKGYHNGNSEPRGFGHIGITVDDVYK---ACERFERLGVEFAKKPDGGK--LKGVAFIKDPDDYWIEIFDL  175 (185)
Q Consensus       107 ~~~~~~~~~~~~~~~g~~hi~~~v~dv~~---~~~~l~~~G~~~~~~~~~~~--~~~~~~~~DPdG~~iEl~~~  175 (185)
                             +     ..+++|+||.|+|+++   +.++|+++|+++...|....  .+..+||+|||||.|||++.
T Consensus        64 -------~-----~~~~~Hiaf~v~d~~~l~~~~~~l~~~Gv~i~~~p~~~~~~~~~~~yf~DPdG~~iEl~~~  125 (143)
T cd07243          64 -------P-----DGKLHHFSFFLESWEDVLKAGDIISMNDVSIDIGPTRHGITRGQTIYFFDPSGNRNETFAG  125 (143)
T ss_pred             -------C-----CCCceEEEEEcCCHHHHHHHHHHHHHcCCceEECCcCCCCCCceEEEEECCCCCEEEEecC
Confidence                   0     1267899999999887   56899999999876553322  24579999999999999864

This subfamily contains the C-terminal, catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the C-terminal domain.

>TIGR03081 metmalonyl_epim methylmalonyl-CoA epimerase

Probab=99.80  E-value=8e-19  Score=123.86  Aligned_cols=124  Identities=25%  Similarity=0.388  Sum_probs=85.8

Q ss_pred             eEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCC
Q 029933           28 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESD  107 (185)
Q Consensus        28 ~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~  107 (185)
                      +++|++|.|+|++++++||+++|||++..........+..+++..+                   ...++|.........
T Consensus         1 ~i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~-------------------~~~i~l~~~~~~~~~   61 (128)
T TIGR03081         1 RIDHVGIAVPDLEEAAKLYEDVLGAHVSHIEEVPEQGVKVVFIALG-------------------NTKVELLEPLGEDSP   61 (128)
T ss_pred             CCCEEEEEeCCHHHHHHHHHHHhCCCCccceeCCCCCcEEEEEecC-------------------CEEEEEEecCCCCCh
Confidence            5789999999999999999999999987654333333445555432                   346777543222110


Q ss_pred             CCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCEEeec-CCCCccc-eEEEE--ECCCCcEEEEee
Q 029933          108 PDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKK-PDGGKLK-GVAFI--KDPDDYWIEIFD  174 (185)
Q Consensus       108 ~~~~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~-~~~~~~~-~~~~~--~DPdG~~iEl~~  174 (185)
                        ...+...  ...++.|+||.|+|+++++++|+++|+++..+ |..+.++ +.+|+  +||||++||++|
T Consensus        62 --~~~~~~~--~~~g~~~i~~~v~di~~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~~~~dp~G~~~E~~~  128 (128)
T TIGR03081        62 --IAKFLEK--NGGGIHHIAIEVDDIEAALETLKEKGVRLIDEEPRIGAGGKPVAFLHPKSTGGVLIELEE  128 (128)
T ss_pred             --HHHHHhc--CCCceEEEEEEcCCHHHHHHHHHHCCCcccCCCCccCCCCCEEEEecccccCcEEEEecC
Confidence              0001001  12367899999999999999999999999864 5554443 45566  799999999986

Members of this protein family are the enzyme methylmalonyl-CoA epimerase (EC 5.1.99.1), also called methylmalonyl-CoA racemase. This enzyme converts (2R)-methylmalonyl-CoA to (2S)-methylmalonyl-CoA, which is then a substrate for methylmalonyl-CoA mutase (TIGR00642). It is known in bacteria, archaea, and as a mitochondrial protein in animals. It is closely related to lactoylglutathione lyase (TIGR00068), which is also called glyoxylase I, and is also a homodimer.

>cd08351 ChaP_like ChaP, an enzyme involved in the biosynthesis of the antitumor agent chartreusin (cha); and similar proteins

Probab=99.79  E-value=7.2e-18  Score=118.92  Aligned_cols=110  Identities=17%  Similarity=0.336  Sum_probs=79.9

Q ss_pred             ceeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCC
Q 029933           26 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE  105 (185)
Q Consensus        26 ~~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~  105 (185)
                      .++++|++|.|+|+++|++||+++||+++....    ..+  .++..+.                  ...+.+...  ..
T Consensus         2 ~~~~~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~----~~~--~~~~~~~------------------~~~l~~~~~--~~   55 (123)
T cd08351           2 TVTLNHTIVPARDREASAEFYAEILGLPWAKPF----GPF--AVVKLDN------------------GVSLDFAQP--DG   55 (123)
T ss_pred             cceEeEEEEEcCCHHHHHHHHHHhcCCEeeecc----CCE--EEEEcCC------------------CcEEEEecC--CC
Confidence            468999999999999999999999999887632    112  1122111                  234444321  00


Q ss_pred             CCCCCCCCCCCCCCCCCceEEEEEeC--CHHHHHHHHHhcCCEEeecCCC--------CccceEEEEECCCCcEEEEeec
Q 029933          106 SDPDFKGYHNGNSEPRGFGHIGITVD--DVYKACERFERLGVEFAKKPDG--------GKLKGVAFIKDPDDYWIEIFDL  175 (185)
Q Consensus       106 ~~~~~~~~~~~~~~~~g~~hi~~~v~--dv~~~~~~l~~~G~~~~~~~~~--------~~~~~~~~~~DPdG~~iEl~~~  175 (185)
                                    .....|++|.++  |+++++++|+++|+++..+|..        ..+++.+||+|||||.|||+++
T Consensus        56 --------------~~~~~h~a~~v~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~g~~~~~f~DPdG~~iEl~~~  121 (123)
T cd08351          56 --------------EIPPQHYAFLVSEEEFDRIFARIRERGIDYWADPQRTEPGQINTNDGGRGVYFLDPDGHLLEIITR  121 (123)
T ss_pred             --------------CCCcceEEEEeCHHHHHHHHHHHHHcCCceecCCcccccccccCCCCeeEEEEECCCCCEEEEEec
Confidence                          013479999887  6999999999999998776543        2345789999999999999987

ChaP is an enzyme involved in the biosynthesis of the potent antitumor agent chartreusin (cha). Cha is an aromatic polyketide glycoside produced by Streptomyces chartreusis. ChaP may play a role as a meta-cleavage dioxygenase in the oxidative rearrangement of the anthracyclic polyketide. ChaP belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07257 THT_oxygenase_C The C-terminal domain of 2,4,5-Trihydroxytoluene (THT) oxygenase, which is an extradiol dioxygenease in the 2,4-dinitrotoluene (DNT) degradation pathway

Probab=99.79  E-value=1.9e-18  Score=126.73  Aligned_cols=120  Identities=17%  Similarity=0.220  Sum_probs=81.0

Q ss_pred             eEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecC-CCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCC
Q 029933           28 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFP-EMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  106 (185)
Q Consensus        28 ~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~  106 (185)
                      +|+|++|.|+|++++++||+++||+++......+ .......|+..++....            ..+..+.+..      
T Consensus         1 ri~Hv~l~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~l~~~~~~~~------------~~~~~~~l~~------   62 (153)
T cd07257           1 RLGHVVLEVPDFAASFDWYTETFGLKPSDVIYLPGPGNPVAAFLRLDRGEEY------------VDHHTLALAQ------   62 (153)
T ss_pred             CccEEEEecCCHHHHHHHHHHhcCCeEEeeEecCCCCCcEEEEEecCCCCCc------------ccchHHHHhc------
Confidence            5789999999999999999999999987654332 12234555543211000            0000111110      


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEeCCHHHHH---HHHHhcCCEEeecCCCCcc--ceEEEEECCCCcEEEEeecC
Q 029933          107 DPDFKGYHNGNSEPRGFGHIGITVDDVYKAC---ERFERLGVEFAKKPDGGKL--KGVAFIKDPDDYWIEIFDLK  176 (185)
Q Consensus       107 ~~~~~~~~~~~~~~~g~~hi~~~v~dv~~~~---~~l~~~G~~~~~~~~~~~~--~~~~~~~DPdG~~iEl~~~~  176 (185)
                                 ....+++||||.|+|++++.   ++|+++|+++...+.....  ...+|++|||||.|||+...
T Consensus        63 -----------~~~~g~~Hiaf~v~die~~~~~~~~L~~~Gv~v~~~~g~~~~g~~~~~y~~DPdG~~iEl~~~~  126 (153)
T cd07257          63 -----------GPESGVHHAAFEVHDFDAQGLGHDYLREKGYEHVWGVGRHILGSQIFDYWFDPWGFIVEHYTDG  126 (153)
T ss_pred             -----------CCCCceeEEEEEcCCHHHHHHHHHHHHHCCCcEeecCCccCCCCCEEEEEECCCCCEEEEEcCc
Confidence                       00237899999999999986   9999999998866533222  23679999999999999754

This subfamily contains the C-terminal, catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>cd07263 Glo_EDI_BRP_like_16 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.79  E-value=1.1e-17  Score=115.92  Aligned_cols=119  Identities=19%  Similarity=0.325  Sum_probs=83.4

Q ss_pred             EEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCCCCC
Q 029933           31 QTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDF  110 (185)
Q Consensus        31 h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~  110 (185)
                      |++|.|.|++++++||+++|||++..+....+ ....+.+..++.                ....+++........  . 
T Consensus         1 Hv~l~v~d~~~~~~fY~~~lG~~~~~~~~~~~-~~~~~~~~~~~~----------------~~~~l~~~~~~~~~~--~-   60 (119)
T cd07263           1 LVSLYVDDQDKALAFYTEKLGFEVREDVPMGG-GFRWVTVAPPGS----------------PETSLVLAPPANPAA--M-   60 (119)
T ss_pred             CceEEeCCHHHHHHHHHhccCeEEEEeeccCC-CcEEEEEeCCCC----------------CeeEEEEeCCCCccc--c-
Confidence            78999999999999999999999987743211 223333432210                012444432221111  0 


Q ss_pred             CCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCEEeecCCCCccceEEEEECCCCcEEEEee
Q 029933          111 KGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFD  174 (185)
Q Consensus       111 ~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~  174 (185)
                           ......+..|++|.|+|+++++++++++|+++..++.....++.+|++|||||.|||+|
T Consensus        61 -----~~~~~~~~~~~~~~v~di~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~  119 (119)
T cd07263          61 -----SGLQPGGTPGLVLATDDIDATYEELKARGVEFSEEPREMPYGTVAVFRDPDGNLFVLVQ  119 (119)
T ss_pred             -----ccccCCCceEEEEEehHHHHHHHHHHhCCCEEeeccccCCCceEEEEECCCCCEEEEeC
Confidence                 00122367799999999999999999999999988755555678999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07247 SgaA_N_like N-terminal domain of Streptomyces griseus SgaA (suppression of growth disturbance caused by A-factor at a high concentration under high osmolality during early growth phase), and similar domains

Probab=99.78  E-value=1.2e-17  Score=115.82  Aligned_cols=113  Identities=19%  Similarity=0.152  Sum_probs=80.9

Q ss_pred             EEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCCC
Q 029933           29 MQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDP  108 (185)
Q Consensus        29 i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~  108 (185)
                      +.|++|.|+|++++++||+++||+++..... ....+  .++..++                  ...+.++......   
T Consensus         1 ~~hi~l~v~d~~~s~~FY~~~lG~~~~~~~~-~~~~~--~~~~~~~------------------~~~~~~~~~~~~~---   56 (114)
T cd07247           1 PVWFELPTTDPERAKAFYGAVFGWTFEDMGD-GGGDY--AVFSTGG------------------GAVGGLMKAPEPA---   56 (114)
T ss_pred             CEEEEeeCCCHHHHHHHHHhccCceeeeccC-CCCce--EEEEeCC------------------ccEEEEecCCCCC---
Confidence            3699999999999999999999999876532 12222  2333211                  1234443221110   


Q ss_pred             CCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCEEeecCCCCc-cceEEEEECCCCcEEEEee
Q 029933          109 DFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGK-LKGVAFIKDPDDYWIEIFD  174 (185)
Q Consensus       109 ~~~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~~~~~-~~~~~~~~DPdG~~iEl~~  174 (185)
                               .......|++|.|+|+++++++|+++|+++..+|.... .++.+|++|||||.|||+|
T Consensus        57 ---------~~~~~~~~~~f~v~di~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~DPdG~~~~l~~  114 (114)
T cd07247          57 ---------AGSPPGWLVYFAVDDVDAAAARVEAAGGKVLVPPTDIPGVGRFAVFADPEGAVFGLWQ  114 (114)
T ss_pred             ---------CCCCCeEEEEEEeCCHHHHHHHHHHCCCEEEeCCcccCCcEEEEEEECCCCCEEEeEC
Confidence                     01124579999999999999999999999998775443 4568999999999999975

SgaA suppresses the growth disturbances caused by high osmolarity and a high concentration of A-factor, a microbial hormone, during the early growth phase in Streptomyces griseus. A-factor (2-isocapryloyl-3R-hydroxymethyl-gamma-butyrolactone) controls morphological differentiation and secondary metabolism in Streptomyces griseus. It is a chemical signaling molecule that at a very low concentration acts as a switch for yellow pigment production, aerial mycelium formation, streptomycin production, and streptomycin resistance. The structure and amino acid sequence of SgaA are closely related to a group of antibiotics resistance proteins, including bleomycin resistance protein, mitomycin resistance protein, and fosfomycin resistance proteins. SgaA might also function as a strep

>cd07265 2_3_CTD_N N-terminal domain of catechol 2,3-dioxygenase

Probab=99.78  E-value=1.4e-17  Score=117.00  Aligned_cols=113  Identities=22%  Similarity=0.281  Sum_probs=79.3

Q ss_pred             eeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCC
Q 029933           27 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  106 (185)
Q Consensus        27 ~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~  106 (185)
                      ++++|++|.|+|++++++||+++|||++.....  +.  . .++.....               ..+..+.+.  ...  
T Consensus         3 ~~l~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~--~~--~-~~~~~~~~---------------~~~~~~~l~--~~~--   58 (122)
T cd07265           3 LRPGHVQLRVLDLEEAIKHYREVLGLDEVGRDD--QG--R-VYLKAWDE---------------FDHHSIVLR--EAD--   58 (122)
T ss_pred             ceEeEEEEEeCCHHHHHHHHHhccCCEeeeecC--Cc--e-EEEEccCC---------------CcccEEEec--cCC--
Confidence            489999999999999999999999999876521  11  1 22221110               002233331  110  


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEeC---CHHHHHHHHHhcCCEEeecCCC--CccceEEEEECCCCcEEEEeecC
Q 029933          107 DPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDG--GKLKGVAFIKDPDDYWIEIFDLK  176 (185)
Q Consensus       107 ~~~~~~~~~~~~~~~g~~hi~~~v~---dv~~~~~~l~~~G~~~~~~~~~--~~~~~~~~~~DPdG~~iEl~~~~  176 (185)
                                   ..++.|++|.|+   |+++++++|+++|+++...|..  ...+..+||+|||||.|||++..
T Consensus        59 -------------~~~~~hiaf~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iE~~~~~  120 (122)
T cd07265          59 -------------TAGLDFMGFKVLDDADLEKLEARLQAYGVAVERIPAGELPGVGRRVRFQLPSGHTMELYADK  120 (122)
T ss_pred             -------------CCCeeEEEEEeCCHHHHHHHHHHHHHCCCcEEEcccCCCCCCceEEEEECCCCCEEEEEEec
Confidence                         115689999997   7999999999999998765532  22346799999999999998754

This subfamily contains the N-terminal, non-catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the N-terminal do

>cd07237 BphC1-RGP6_C_like C-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=99.78  E-value=1.3e-17  Score=122.43  Aligned_cols=120  Identities=20%  Similarity=0.286  Sum_probs=83.3

Q ss_pred             CCceeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecC---CCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEee
Q 029933           24 TNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFP---EMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTH  100 (185)
Q Consensus        24 ~~~~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~  100 (185)
                      +..++|+|++|.|+|++++++||+++||+++.......   +......++..+..                 +..+.+..
T Consensus         5 ~~~~~l~Hi~l~v~Dl~~a~~FY~~~LGl~~~~~~~~~~~~~~~~~~~~l~~~~~-----------------~~~i~~~~   67 (154)
T cd07237           5 TGDQGLGHVVLATPDPDEAHAFYRDVLGFRLSDEIDIPLPPGPTARVTFLHCNGR-----------------HHSLALAE   67 (154)
T ss_pred             cCCCccCEEEEEeCCHHHHHHHHHHccCCEEEEEEcccCCCCCcceEEEEEeCCC-----------------CCCEEEEc
Confidence            44568999999999999999999999999987643221   11223344433211                 23344421


Q ss_pred             cCCCCCCCCCCCCCCCCCCCCCceEEEEEeCCHH---HHHHHHHhcCCEEeecCCCC--ccceEEEEECCCCcEEEEeec
Q 029933          101 NWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVY---KACERFERLGVEFAKKPDGG--KLKGVAFIKDPDDYWIEIFDL  175 (185)
Q Consensus       101 ~~~~~~~~~~~~~~~~~~~~~g~~hi~~~v~dv~---~~~~~l~~~G~~~~~~~~~~--~~~~~~~~~DPdG~~iEl~~~  175 (185)
                      ..                ...++.||+|.|+|++   +++++|+++|+++...+...  ...+.+|++||+||.|||+..
T Consensus        68 ~~----------------~~~g~~Hiaf~V~d~~~l~~~~~~L~~~G~~v~~~~~~~~~~~~~~~y~~DPdG~~iEl~~~  131 (154)
T cd07237          68 GP----------------GPKRIHHLMLEVTSLDDVGRAYDRVRARGIPIAMTLGRHTNDRMLSFYVRTPSGFAIEYGWG  131 (154)
T ss_pred             CC----------------CCceeEEEEEEcCCHHHHHHHHHHHHHcCCceeccCCccCCCCcEEEEEECCCCcEEEeccC
Confidence            10                1127799999998754   68999999999998766432  234579999999999999865


Q ss_pred             C
Q 029933          176 K  176 (185)
Q Consensus       176 ~  176 (185)
                      .
T Consensus       132 ~  132 (154)
T cd07237         132 G  132 (154)
T ss_pred             c
Confidence            3

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the C-terminal, catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its C-terminal repeat is represented in thi

>cd07245 Glo_EDI_BRP_like_9 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.77  E-value=6.5e-18  Score=115.86  Aligned_cols=114  Identities=25%  Similarity=0.332  Sum_probs=81.4

Q ss_pred             EEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCCC
Q 029933           29 MQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDP  108 (185)
Q Consensus        29 i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~  108 (185)
                      |+|++|.|+|++++++||+++||+++..+...+.   ...++..++                  ...+++......... 
T Consensus         1 i~Hi~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~---~~~~~~~~~------------------~~~i~l~~~~~~~~~-   58 (114)
T cd07245           1 LDHVALRVPDLEASRAFYTDVLGLEEGPRPPFLF---PGAWLYAGD------------------GPQLHLIEEDPPDAL-   58 (114)
T ss_pred             CCeEEEecCCHHHHHHHHHHccCCcccCcCCCCC---CceEEEeCC------------------CcEEEEEecCCCccc-
Confidence            5799999999999999999999998876532221   122333221                  225666544222110 


Q ss_pred             CCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCEEeecCCCCccceEEEEECCCCcEEEE
Q 029933          109 DFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEI  172 (185)
Q Consensus       109 ~~~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl  172 (185)
                              .....+..|++|.|+|+++++++++++|+++...+......+.+|+.||+||.|||
T Consensus        59 --------~~~~~~~~~~~~~v~d~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~DP~G~~iE~  114 (114)
T cd07245          59 --------PEGPGRDDHIAFRVDDLDAFRARLKAAGVPYTESDVPGDGVRQLFVRDPDGNRIEL  114 (114)
T ss_pred             --------cCCCcccceEEEEeCCHHHHHHHHHHcCCCcccccCCCCCccEEEEECCCCCEEeC
Confidence                    01122568999999999999999999999998877543445679999999999996

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases.

>cd09011 Glo_EDI_BRP_like_23 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.77  E-value=1.3e-17  Score=116.91  Aligned_cols=117  Identities=17%  Similarity=0.218  Sum_probs=77.3

Q ss_pred             eeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCC
Q 029933           27 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  106 (185)
Q Consensus        27 ~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~  106 (185)
                      +++.|+.|.|+|++++++||+++|||++....  .  .+ ..+ ..                    ...+.+...+....
T Consensus         1 ~~~~~~~l~v~D~~~a~~FY~~~lG~~~~~~~--~--~~-~~~-~~--------------------~~~l~~~~~~~~~~   54 (120)
T cd09011           1 MKFKNPLLVVKDIEKSKKFYEKVLGLKVVMDF--G--EN-VTF-EG--------------------GFALQEGYSWLEGI   54 (120)
T ss_pred             CEEEEEEEEECCHHHHHHHHHHhcCCEEeecc--C--ce-EEE-ec--------------------cceeccchhhhccC
Confidence            37889999999999999999999999986532  1  11 111 11                    11111110000000


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCC-EEeecCCCCcc-ceEEEEECCCCcEEEEeec
Q 029933          107 DPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGV-EFAKKPDGGKL-KGVAFIKDPDDYWIEIFDL  175 (185)
Q Consensus       107 ~~~~~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~-~~~~~~~~~~~-~~~~~~~DPdG~~iEl~~~  175 (185)
                      ...  +..    ...+..||+|.|+|+++++++|+++|+ ++..+|....+ .+.+||+|||||+|||.+.
T Consensus        55 ~~~--~~~----~~~~~~~l~~~v~dvd~~~~~l~~~g~~~~~~~~~~~~~g~r~~~~~DPdGn~iei~~~  119 (120)
T cd09011          55 SKA--DII----EKSNNFELYFEEEDFDAFLDKLKRYDNIEYVHPIKEHPWGQRVVRFYDPDKHIIEVGES  119 (120)
T ss_pred             Ccc--ccc----ccCCceEEEEEehhhHHHHHHHHhcCCcEEecCcccCCCccEEEEEECCCCCEEEEecc
Confidence            000  011    112447999999999999999999985 78777765443 4689999999999999874

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08347 PcpA_C_like C-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=99.77  E-value=1.9e-17  Score=121.97  Aligned_cols=118  Identities=16%  Similarity=0.217  Sum_probs=83.2

Q ss_pred             EEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCCC
Q 029933           29 MQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDP  108 (185)
Q Consensus        29 i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~  108 (185)
                      ++|++|.|+|++++++||+++|||++..+..   .  ...+...+..                .+..+++........  
T Consensus         2 l~HI~i~V~Dle~s~~FY~~~LG~~~~~~~~---~--~~~~~~~~~~----------------~~~~l~l~~~~~~~~--   58 (157)
T cd08347           2 LHGVTLTVRDPEATAAFLTDVLGFREVGEEG---D--RVRLEEGGGG----------------PGAVVDVLEEPDQPR--   58 (157)
T ss_pred             cccEEEEeCCHHHHHHHHHHhcCCEEEeeeC---C--EEEEEecCCC----------------CCCEEEEEeCCCCCC--
Confidence            6899999999999999999999999887632   1  1222222100                145677765321110  


Q ss_pred             CCCCCCCCCCCCCCceEEEEEeCC---HHHHHHHHHhcCCEEeecCCCCccceEEEEECCCCcEEEEeecCc
Q 029933          109 DFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKT  177 (185)
Q Consensus       109 ~~~~~~~~~~~~~g~~hi~~~v~d---v~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~~  177 (185)
                             ...+..++.||+|.|+|   +++++++|+++|+++.. +.+....+.+||+|||||+|||++...
T Consensus        59 -------~~~~~~~l~Hiaf~v~d~~dvd~~~~~L~~~Gv~~~~-~~~~~~~~s~yf~DPdG~~iEl~~~~~  122 (157)
T cd08347          59 -------GRPGAGTVHHVAFRVPDDEELEAWKERLEALGLPVSG-IVDRFYFKSLYFREPGGILFEIATDGP  122 (157)
T ss_pred             -------CcccCCceEEEEEECCCHHHHHHHHHHHHHCCCCccc-ccccccEEEEEEECCCCcEEEEEECCC
Confidence                   01122367899999998   99999999999998643 333334467999999999999998753

The C-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07255 Glo_EDI_BRP_like_12 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.77  E-value=3.8e-17  Score=114.97  Aligned_cols=118  Identities=23%  Similarity=0.367  Sum_probs=83.1

Q ss_pred             eeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCC
Q 029933           27 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  106 (185)
Q Consensus        27 ~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~  106 (185)
                      ++++|++|.|+|++++++||+++|||++....   + .  .+++..++.                 ...+.+........
T Consensus         1 ~~i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~---~-~--~~~l~~~~~-----------------~~~l~l~~~~~~~~   57 (125)
T cd07255           1 TRIGAVTLRVADLERSLAFYQDVLGLEVLERT---D-S--TAVLGTGGK-----------------RPLLVLEEDPDAPP   57 (125)
T ss_pred             CEEEEEEEEECCHHHHHHHHHhccCcEEEEcC---C-C--EEEEecCCC-----------------eEEEEEEeCCCCCc
Confidence            47999999999999999999999999998762   1 1  234443210                 23455543221110


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEeC---CHHHHHHHHHhcCCEEeecCCCCccceEEEEECCCCcEEEEeecCc
Q 029933          107 DPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKT  177 (185)
Q Consensus       107 ~~~~~~~~~~~~~~~g~~hi~~~v~---dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~~  177 (185)
                           ..    ....+..|++|.|+   ++++++++|+++|+++.... .....+.+|++|||||.|||....+
T Consensus        58 -----~~----~~~~~~~hi~f~v~~~~~v~~~~~~l~~~g~~~~~~~-~~~~~~~~~~~DPdG~~iEi~~~~~  121 (125)
T cd07255          58 -----AP----PGATGLYHFAILLPSRADLAAALRRLIELGIPLVGAS-DHLVSEALYLSDPEGNGIEIYADRP  121 (125)
T ss_pred             -----cc----CCCCcEEEEEEECCCHHHHHHHHHHHHHcCCceeccc-cccceeEEEEECCCCCEEEEEEecC
Confidence                 01    11236789999997   49999999999999876543 3333467999999999999987665

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08346 PcpA_N_like N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=99.76  E-value=2.3e-17  Score=115.72  Aligned_cols=122  Identities=20%  Similarity=0.279  Sum_probs=82.4

Q ss_pred             eEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCC-ceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCC
Q 029933           28 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEM-KFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  106 (185)
Q Consensus        28 ~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~  106 (185)
                      .|+|++|.|+|++++++||+++|||++.......+. .....++.....               .+...++++.......
T Consensus         1 ~i~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~l~l~~~~~~~~   65 (126)
T cd08346           1 GLHHVTLITRDAQETVDFYTDVLGLRLVKKTVNQDDPGTYHLFFGDGLG---------------SPGTLLTFFEWPDAGP   65 (126)
T ss_pred             CcccEEEEcCChhHhHHHHHHccCCEEeeeEeccCCCceEEEEEecCCC---------------CCCCEEEEEecCCCCC
Confidence            368999999999999999999999998876432221 112223322100               0134677764422211


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEeC---CHHHHHHHHHhcCCEEeecCCCCccceEEEEECCCCcEEEEe
Q 029933          107 DPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIF  173 (185)
Q Consensus       107 ~~~~~~~~~~~~~~~g~~hi~~~v~---dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~  173 (185)
                      .        ......+..|++|.|+   ++++++++++++|+++...+.. .+++.+||+|||||+|||+
T Consensus        66 ~--------~~~~~~~~~hi~f~v~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~DP~G~~iE~~  126 (126)
T cd08346          66 K--------GRRGPGQIHHIAFSVPSEASLDAWRERLRAAGVPVSGVVDH-FGERSIYFEDPDGLRLELT  126 (126)
T ss_pred             C--------CCCCCCcEEEEEEEcCCHHHHHHHHHHHHHcCCcccceEee-cceEEEEEECCCCCEEEeC
Confidence            0        0112236789999998   5799999999999998764433 3456899999999999985

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07256 HPCD_C_class_II C-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD), which catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate; belongs to the type I class II family of extradiol dioxygenases

Probab=99.76  E-value=3.9e-17  Score=120.76  Aligned_cols=116  Identities=18%  Similarity=0.285  Sum_probs=77.2

Q ss_pred             eeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCC
Q 029933           27 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  106 (185)
Q Consensus        27 ~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~  106 (185)
                      ++|+|++|.|+|++++++||+++|||++..............++.....                 ...+.+...  .  
T Consensus         2 ~~l~Hv~l~V~Dl~~s~~FY~~vLGl~~~~~~~~~~~~~~~~~l~~~~~-----------------~~~i~l~~~--~--   60 (161)
T cd07256           2 QRLDHFNLRVPDVDAGLAYYRDELGFRVSEYTEDDDGTTWAAWLHRKGG-----------------VHDTALTGG--N--   60 (161)
T ss_pred             ceEEEEEEecCCHHHHHHHHHhccCCEEEEEeccCCCcEEEEEEecCCC-----------------cceEEEecC--C--
Confidence            4899999999999999999999999998754332222222334432110                 223333211  0  


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEeCC---HHHHHHHHHhcCCEE--eecCCC-C-ccceEEEEECCCCcEEEEeecC
Q 029933          107 DPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEF--AKKPDG-G-KLKGVAFIKDPDDYWIEIFDLK  176 (185)
Q Consensus       107 ~~~~~~~~~~~~~~~g~~hi~~~v~d---v~~~~~~l~~~G~~~--~~~~~~-~-~~~~~~~~~DPdG~~iEl~~~~  176 (185)
                                   ..++.|++|.|+|   +++++++|+++|+..  ...|.. + ...+.+||+|||||.|||++..
T Consensus        61 -------------~~~~~Hiaf~v~~~~~v~~~~~~L~~~G~~~~~~~~p~~~g~~~~~~~y~~DPdG~~iEl~~~~  124 (161)
T cd07256          61 -------------GPRLHHVAFWVPEPHNIIRTCDLLAAAGYSDRIERGPGRHGISNAFFLYLRDPDGHRIEIYTGD  124 (161)
T ss_pred             -------------CCceeEEEEEcCCHHHHHHHHHHHHHcCCCcccccCCCccCCCCceEEEEECCCCCeEEEeecC
Confidence                         1167899999986   777889999999863  223322 1 1234689999999999998643

This subfamily contains the C-terminal, catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of

>cd07253 Glo_EDI_BRP_like_2 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.76  E-value=4.3e-17  Score=114.03  Aligned_cols=118  Identities=22%  Similarity=0.325  Sum_probs=81.9

Q ss_pred             eEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCC
Q 029933           28 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESD  107 (185)
Q Consensus        28 ~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~  107 (185)
                      +++|+.|.|+|++++++||+++||++........  .+  .++..+                   ...+++........ 
T Consensus         3 ~l~hi~l~v~d~~~s~~Fy~~~lG~~~~~~~~~~--~~--~~~~~~-------------------~~~~~l~~~~~~~~-   58 (125)
T cd07253           3 RIDHVVLTVADIEATLDFYTRVLGMEVVRFGEEV--GR--KALRFG-------------------SQKINLHPVGGEFE-   58 (125)
T ss_pred             ccceEEEEecCHHHHHHHHHHHhCceeecccccC--Cc--eEEEeC-------------------CEEEEEecCCCccC-
Confidence            6899999999999999999999999988763211  11  222221                   23455543222110 


Q ss_pred             CCCCCCCCCCCCCCCceEEEEEeCC-HHHHHHHHHhcCCEEeecCCCC----ccceEEEEECCCCcEEEEeec
Q 029933          108 PDFKGYHNGNSEPRGFGHIGITVDD-VYKACERFERLGVEFAKKPDGG----KLKGVAFIKDPDDYWIEIFDL  175 (185)
Q Consensus       108 ~~~~~~~~~~~~~~g~~hi~~~v~d-v~~~~~~l~~~G~~~~~~~~~~----~~~~~~~~~DPdG~~iEl~~~  175 (185)
                      +.  ..    ....+..|++|.+++ +++++++|+++|+++...+...    ..++.+||+|||||+||+.++
T Consensus        59 ~~--~~----~~~~~~~hi~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~ve~~~~  125 (125)
T cd07253          59 PA--AG----SPGPGSDDLCLITEPPIDELVAHLEAHGVPIEEGPVPRTGARGPITSVYFRDPDGNLIELSNY  125 (125)
T ss_pred             cC--cc----CCCCCCceEEEEecccHHHHHHHHHHCCceeecCcccccCCCCCccEEEEECCCCCEEEeeeC
Confidence            00  01    112367899999975 9999999999999988766431    224579999999999999874

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08355 Glo_EDI_BRP_like_14 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.76  E-value=1.3e-16  Score=111.94  Aligned_cols=120  Identities=14%  Similarity=0.147  Sum_probs=81.4

Q ss_pred             EEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCCCCC
Q 029933           31 QTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDF  110 (185)
Q Consensus        31 h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~  110 (185)
                      ...|.|+|++++++||+++||+++.......+..+....+..+                   ...+.+........ .  
T Consensus         2 ~p~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~-------------------~~~~~l~~~~~~~~-~--   59 (122)
T cd08355           2 WPTLRYRDAAAAIDWLTDAFGFEERLVVPDDDGGVAHAELRFG-------------------DGGVMVGSVRDDYR-A--   59 (122)
T ss_pred             eEEEEECCHHHHHHHHHHhcCCEEEEEEeCCCCcEEEEEEEEC-------------------CEEEEEecCCCccc-c--
Confidence            3578899999999999999999998765333333333334332                   12344432221110 0  


Q ss_pred             CCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCEEeecCCCCcc-ceEEEEECCCCcEEEEeec
Q 029933          111 KGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKL-KGVAFIKDPDDYWIEIFDL  175 (185)
Q Consensus       111 ~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~~~~~~-~~~~~~~DPdG~~iEl~~~  175 (185)
                        .. ......+..||+|.|+|+++++++++++|+++..+|....+ .+.++++|||||+|+|.++
T Consensus        60 --~~-~~~~~~~~~~~~~~v~d~d~~~~~l~~~G~~v~~~~~~~~~g~~~~~~~DPdG~~~~l~~~  122 (122)
T cd08355          60 --SS-ARAGGAGTQGVYVVVDDVDAHYERARAAGAEILREPTDTPYGSREFTARDPEGNLWTFGTY  122 (122)
T ss_pred             --cc-cccCCCceEEEEEEECCHHHHHHHHHHCCCEEeeCccccCCCcEEEEEECCCCCEEEEecC
Confidence              00 00111245799999999999999999999999988765443 3678999999999999753

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd08364 FosX FosX, a fosfomycin resistance protein, catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1

Probab=99.76  E-value=3.9e-17  Score=116.65  Aligned_cols=117  Identities=16%  Similarity=0.180  Sum_probs=78.6

Q ss_pred             eEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCC
Q 029933           28 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESD  107 (185)
Q Consensus        28 ~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~  107 (185)
                      +++|++|.|+|++++++||+++||+++..+..........                  ..|...+...+++...  ..  
T Consensus         4 ~i~hv~l~V~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~------------------~~~~~~~~~~i~l~~~--~~--   61 (131)
T cd08364           4 GLSHITLIVKDLNKTTAFLQNIFNAREVYSSGDKTFSLSK------------------EKFFLIGGLWIAIMEG--DS--   61 (131)
T ss_pred             cEeEEEEEeCCHHHHHHHHHHHhCCeeEEecccccccccc------------------eeEEEcCCeEEEEecC--CC--
Confidence            6899999999999999999999999876552211100000                  0011111234555321  10  


Q ss_pred             CCCCCCCCCCCCCCCceEEEEEeC--CHHHHHHHHHhcCCEEeecCC-CCccceEEEEECCCCcEEEEeecC
Q 029933          108 PDFKGYHNGNSEPRGFGHIGITVD--DVYKACERFERLGVEFAKKPD-GGKLKGVAFIKDPDDYWIEIFDLK  176 (185)
Q Consensus       108 ~~~~~~~~~~~~~~g~~hi~~~v~--dv~~~~~~l~~~G~~~~~~~~-~~~~~~~~~~~DPdG~~iEl~~~~  176 (185)
                           .     ...++.||+|.|+  ++++++++|+++|+++..... ....++.+||+|||||.|||....
T Consensus        62 -----~-----~~~~~~Hiaf~v~~~~ld~~~~~l~~~gv~~~~~~~~~~~~g~~~yf~DPdG~~iEl~~~~  123 (131)
T cd08364          62 -----L-----QERTYNHIAFKISDSDVDEYTERIKALGVEMKPPRPRVQGEGRSIYFYDFDNHLFELHTGT  123 (131)
T ss_pred             -----C-----CCCCceEEEEEcCHHHHHHHHHHHHHCCCEEecCCccccCCceEEEEECCCCCEEEEecCC
Confidence                 0     0125689999998  799999999999998764322 222356899999999999998654

This subfamily family contains FosX, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of the configuration at C1 in the presence of Mn(II). The hydrated fosfomycin loses the inhibition activity. FosX is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd09013 BphC-JF8_N_like N-terminal, non-catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=99.76  E-value=4.6e-17  Score=114.33  Aligned_cols=111  Identities=18%  Similarity=0.235  Sum_probs=78.1

Q ss_pred             eEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCC
Q 029933           28 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESD  107 (185)
Q Consensus        28 ~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~  107 (185)
                      +++|+.|.|+|++++++||+++|||++..+..  .    ..++...+..               ....+.+...  .   
T Consensus         6 ~i~hv~l~v~dl~~a~~FY~~~lG~~~~~~~~--~----~~~l~~~~~~---------------~~~~~~l~~~--~---   59 (121)
T cd09013           6 HLAHVELLTPKPEESLWFFTDVLGLEETGREG--Q----SVYLRAWGDY---------------EHHSLKLTES--P---   59 (121)
T ss_pred             EeeEEEEEeCCHHHHHHHHHhCcCCEEEeecC--C----eEEEEeccCC---------------CccEEEEeeC--C---
Confidence            79999999999999999999999999877522  1    2233221100               0233444211  0   


Q ss_pred             CCCCCCCCCCCCCCCceEEEEEeC---CHHHHHHHHHhcCCEEeecCCCCccceEEEEECCCCcEEEEeecC
Q 029933          108 PDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLK  176 (185)
Q Consensus       108 ~~~~~~~~~~~~~~g~~hi~~~v~---dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~  176 (185)
                                  ..++.|++|.++   ++++++++++++|+++...+.....+..+||+|||||.||++...
T Consensus        60 ------------~~~~~h~af~v~~~~~v~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~  119 (121)
T cd09013          60 ------------EAGLGHIAWRASSPEALERRVAALEASGLGIGWIEGDPGHGKAYRFRSPDGHPMELYWEV  119 (121)
T ss_pred             ------------CCceEEEEEEcCCHHHHHHHHHHHHHcCCccccccCCCCCcceEEEECCCCCEEEEEEec
Confidence                        126789999997   588999999999998754332223455799999999999998644

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C

>cd07264 Glo_EDI_BRP_like_15 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.75  E-value=8.2e-17  Score=113.15  Aligned_cols=122  Identities=21%  Similarity=0.303  Sum_probs=77.5

Q ss_pred             EEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCC-
Q 029933           29 MQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESD-  107 (185)
Q Consensus        29 i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~-  107 (185)
                      +.|+.|.|+|++++++||+++|||++.....  ...+.  .+..+                   ...+.+......... 
T Consensus         1 ~~~~~l~v~D~~~s~~FY~~~lG~~~~~~~~--~~~~~--~~~~~-------------------~~~~~~~~~~~~~~~~   57 (125)
T cd07264           1 FGYTIIYVEDVEKTLEFYERAFGFERRFLHE--SGDYG--ELETG-------------------ETTLAFASHDLAESNL   57 (125)
T ss_pred             CceEEEEEcCHHHHHHHHHHhhCCeEEeecC--CCcEE--EecCC-------------------cEEEEEEccccccccc
Confidence            3589999999999999999999998865422  22221  11111                   122222211100000 


Q ss_pred             -CCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCEEeecCCCCcc-ceEEEEECCCCcEEEEeec
Q 029933          108 -PDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKL-KGVAFIKDPDDYWIEIFDL  175 (185)
Q Consensus       108 -~~~~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~~~~~~-~~~~~~~DPdG~~iEl~~~  175 (185)
                       ....+ ......+ +..|++|.|+|+++++++++++|+++..++....+ .+.++++|||||.|||+++
T Consensus        58 ~~~~~~-~~~~~~~-~~~~~~~~v~di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~~~~~~~  125 (125)
T cd07264          58 KGGFVK-ADPAQPP-AGFEIAFVTDDVAAAFARAVEAGAVLVSEPKEKPWGQTVAYVRDINGFLIELCSP  125 (125)
T ss_pred             ccCccC-CccccCC-CcEEEEEEcCCHHHHHHHHHHcCCEeccCCccCCCCcEEEEEECCCCCEEEEecC
Confidence             00000 0000111 33599999999999999999999999887754433 3578999999999999874

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>PRK04101 fosfomycin resistance protein FosB; Provisional

Probab=99.75  E-value=5.9e-17  Score=116.79  Aligned_cols=115  Identities=18%  Similarity=0.290  Sum_probs=81.7

Q ss_pred             eEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCC
Q 029933           28 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESD  107 (185)
Q Consensus        28 ~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~  107 (185)
                      +++|+.|.|+|++++++||+++||+++..+..      ...++..+                   ...+.+......   
T Consensus         4 ~i~hi~L~v~Dl~~s~~FY~~~lG~~~~~~~~------~~~~~~~~-------------------g~~l~l~~~~~~---   55 (139)
T PRK04101          4 GINHICFSVSNLEKSIEFYEKVLGAKLLVKGR------KTAYFDLN-------------------GLWIALNEEKDI---   55 (139)
T ss_pred             cEEEEEEEecCHHHHHHHHHhccCCEEEeecC------eeEEEecC-------------------CeEEEeeccCCC---
Confidence            68999999999999999999999999876421      12333322                   233444321110   


Q ss_pred             CCCCCCCCCCCCCCCceEEEEEeC--CHHHHHHHHHhcCCEEeecCCC-CccceEEEEECCCCcEEEEeecCc
Q 029933          108 PDFKGYHNGNSEPRGFGHIGITVD--DVYKACERFERLGVEFAKKPDG-GKLKGVAFIKDPDDYWIEIFDLKT  177 (185)
Q Consensus       108 ~~~~~~~~~~~~~~g~~hi~~~v~--dv~~~~~~l~~~G~~~~~~~~~-~~~~~~~~~~DPdG~~iEl~~~~~  177 (185)
                            ... ....++.|++|.++  |+++++++|+++|+++...+.. ...++.+||+|||||+|||.+..-
T Consensus        56 ------~~~-~~~~~~~hiaf~v~~~dv~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~DPdGn~iEl~~~~~  121 (139)
T PRK04101         56 ------PRN-EIHQSYTHIAFSIEEEDFDHWYQRLKENDVNILPGRERDERDKKSIYFTDPDGHKFEFHTGTL  121 (139)
T ss_pred             ------CCc-cCCCCeeEEEEEecHHHHHHHHHHHHHCCceEcCCccccCCCceEEEEECCCCCEEEEEeCCH
Confidence                  000 11236689999998  9999999999999998765533 334578999999999999987543

>cd08360 MhqB_like_C C-terminal domain of Burkholderia sp

Probab=99.75  E-value=7.1e-17  Score=115.65  Aligned_cols=114  Identities=18%  Similarity=0.207  Sum_probs=80.2

Q ss_pred             eEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCC
Q 029933           28 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESD  107 (185)
Q Consensus        28 ~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~  107 (185)
                      +++|++|.|+|+++|++||+++||+++.....  .   ...|+..+...               .+..+.+.....    
T Consensus         3 ~l~hi~l~v~dl~~s~~FY~~vlGl~~~~~~~--~---~~~~~~~~~~~---------------~~~~i~l~~~~~----   58 (134)
T cd08360           3 RLGHVVLFVPDVEAAEAFYRDRLGFRVSDRFK--G---RGAFLRAAGGG---------------DHHNLFLIKTPA----   58 (134)
T ss_pred             eeeEEEEEcCCHHHHHHHHHHhcCCEEEEEec--C---cEEEEECCCCC---------------CCcEEEEecCCC----
Confidence            79999999999999999999999999876532  1   13344332100               034555532110    


Q ss_pred             CCCCCCCCCCCCCCCceEEEEEeCCHHHHH---HHHHhcCCEEeecCCCCcc--ceEEEEECCCCcEEEEeecC
Q 029933          108 PDFKGYHNGNSEPRGFGHIGITVDDVYKAC---ERFERLGVEFAKKPDGGKL--KGVAFIKDPDDYWIEIFDLK  176 (185)
Q Consensus       108 ~~~~~~~~~~~~~~g~~hi~~~v~dv~~~~---~~l~~~G~~~~~~~~~~~~--~~~~~~~DPdG~~iEl~~~~  176 (185)
                                 ...+++||+|.|+|++++.   ++|+++|+++...+.....  ...+||+||+||.|||+...
T Consensus        59 -----------~~~g~~hiaf~v~d~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~y~~DP~G~~iEl~~~~  121 (134)
T cd08360          59 -----------PMAGFHHAAFEVGDIDEVMLGGNHMLRAGYQTGWGPGRHRIGSNYFWYFRDPWGGEVEYGADM  121 (134)
T ss_pred             -----------CCCcceEEEEEeCCHHHHHHHHHHHHHcCCccccCCCCcCCCccEEEEEECCCCCEEEEEccc
Confidence                       0137899999999988776   5999999998765533222  34689999999999998643

NF100 MhqB and similar proteins; MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. This subfamily contains the C-terminal, catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd08363 FosB FosB, a fosfomycin resistance protein, catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin

Probab=99.75  E-value=3.6e-17  Score=116.90  Aligned_cols=114  Identities=17%  Similarity=0.258  Sum_probs=80.4

Q ss_pred             EEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCCC
Q 029933           29 MQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDP  108 (185)
Q Consensus        29 i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~  108 (185)
                      |+|++|.|+|++++++||+++|||++.....  .    ..++..+                   +..+.+.......   
T Consensus         1 i~HV~l~V~Dl~~a~~FY~~~LG~~~~~~~~--~----~~~~~~~-------------------~~~l~l~~~~~~~---   52 (131)
T cd08363           1 INHMTFSVSNLDKSISFYKHVFMEKLLVLGE--K----TAYFTIG-------------------GTWLALNEEPDIP---   52 (131)
T ss_pred             CceEEEEECCHHHHHHHHHHhhCCEEeccCC--c----cceEeeC-------------------ceEEEEEccCCCC---
Confidence            5899999999999999999999998865411  1    1223221                   2344443321110   


Q ss_pred             CCCCCCCCCCCCCCceEEEEEeCC--HHHHHHHHHhcCCEEeecCC-CCccceEEEEECCCCcEEEEeecCc
Q 029933          109 DFKGYHNGNSEPRGFGHIGITVDD--VYKACERFERLGVEFAKKPD-GGKLKGVAFIKDPDDYWIEIFDLKT  177 (185)
Q Consensus       109 ~~~~~~~~~~~~~g~~hi~~~v~d--v~~~~~~l~~~G~~~~~~~~-~~~~~~~~~~~DPdG~~iEl~~~~~  177 (185)
                          .  . ....++.||+|.|++  +++++++|+++|+++...+. ....++.+||+|||||.|||++...
T Consensus        53 ----~--~-~~~~~~~hiaf~v~~~dld~~~~~l~~~G~~~~~~~~~~~~~~~~~~f~DPdG~~iEl~~~~~  117 (131)
T cd08363          53 ----R--N-EIRQSYTHIAFTIEDSEFDAFYTRLKEAGVNILPGRKRDVRDRKSIYFTDPDGHKLEVHTGTL  117 (131)
T ss_pred             ----c--C-CcCccceEEEEEecHHHHHHHHHHHHHcCCcccCCCccccCcceEEEEECCCCCEEEEecCcH
Confidence                0  0 112367899999984  99999999999999875543 2234568999999999999998665

This subfamily family contains FosB, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosB catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin, (1R,2S)-epoxypropylphosphonic acid, rendering it inactive. FosB is evolutionarily related to glyoxalase I and type I extradiol dioxygenases

>cd07242 Glo_EDI_BRP_like_6 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.75  E-value=1.1e-16  Score=113.12  Aligned_cols=118  Identities=19%  Similarity=0.287  Sum_probs=83.3

Q ss_pred             eEEEEEEEeCChHHHHHHHHHhc---CCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCC
Q 029933           28 FMQQTMFRIKDPKVSLDFYSRVL---GMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT  104 (185)
Q Consensus        28 ~i~h~~l~v~D~e~s~~FY~~~L---G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~  104 (185)
                      +|+|++|.|+|++++++||+++|   ||++.....  . .  ..|....                  ++..+.+......
T Consensus         1 ~i~Hv~i~v~d~~~~~~Fy~~~l~~~G~~~~~~~~--~-~--~~~~~~~------------------~~~~i~l~~~~~~   57 (128)
T cd07242           1 GIHHVELTVRDLERSRAFYDWLLGLLGFEEVKEWE--D-G--RSWRAGD------------------GGTYLVLQQADGE   57 (128)
T ss_pred             CCceEEEEeCCHHHHHHHHHHHHhhcCCEEEEeec--c-C--ceEEecC------------------CceEEEEEecccC
Confidence            47899999999999999999999   999887632  1 1  1122111                  1456777644322


Q ss_pred             CCCCCCCCCCCCCCCCCCceEEEEEeC---CHHHHHHHHHhcCCEEeecCCC----CccceEEEEECCCCcEEEEeec
Q 029933          105 ESDPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDG----GKLKGVAFIKDPDDYWIEIFDL  175 (185)
Q Consensus       105 ~~~~~~~~~~~~~~~~~g~~hi~~~v~---dv~~~~~~l~~~G~~~~~~~~~----~~~~~~~~~~DPdG~~iEl~~~  175 (185)
                      .. ..   .   .....++.|++|.|+   |+++++++|+++|+.+...+..    ...++.+|++|||||+|||+.+
T Consensus        58 ~~-~~---~---~~~~~g~~hia~~v~~~~d~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~DpdG~~ie~~~~  128 (128)
T cd07242          58 SA-GR---H---DRRNPGLHHLAFRAPSREAVDELYARLAKRGAEILYAPREPYAGGPGYYALFFEDPDGIRLELVAP  128 (128)
T ss_pred             CC-cc---c---ccCCcCeeEEEEEcCCHHHHHHHHHHHHHcCCeEecCCcccccCCCcEEEEEEECCCCcEEEEEeC
Confidence            11 00   0   012236789999997   4899999999999999887653    2344689999999999999864

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07249 MMCE Methylmalonyl-CoA epimerase (MMCE)

Probab=99.75  E-value=2.9e-17  Score=115.59  Aligned_cols=123  Identities=24%  Similarity=0.371  Sum_probs=84.2

Q ss_pred             EEEEEEEeCChHHHHHHHHHhcCCEEeeeeecC-CCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCC
Q 029933           29 MQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFP-EMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESD  107 (185)
Q Consensus        29 i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~  107 (185)
                      ++|++|.|+|++++++||+++|||++....... ...+..+++..+                   ...+++.........
T Consensus         1 ~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~l~l~~~~~~~~~   61 (128)
T cd07249           1 IDHIGIAVPDLEAAIKFYRDVLGVGPWEEEEVPPEQGVRVAFLGLG-------------------NVQIELIEPLDDDSP   61 (128)
T ss_pred             CcEEEEEeCCHHHHHHHHHHhhCCCCccccccCcccccEEEEEEcC-------------------CEEEEEEEECCCCCc
Confidence            479999999999999999999999998764432 223344555432                   456777654322111


Q ss_pred             CCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCEEeecCC-CCccceEEEEECCC---CcEEEEee
Q 029933          108 PDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD-GGKLKGVAFIKDPD---DYWIEIFD  174 (185)
Q Consensus       108 ~~~~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~~-~~~~~~~~~~~DPd---G~~iEl~~  174 (185)
                      .  ..+ . .....+..|++|.|+|+++++++++++|+++..++. ....++.+++.||+   |++|||+|
T Consensus        62 ~--~~~-~-~~~~~g~~h~~f~v~d~~~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~d~~~~~g~~iE~~~  128 (128)
T cd07249          62 I--AKF-L-EKRGEGLHHIAFEVDDIDAALARLKAQGVRLLQEGPRIGAGGKRVAFLHPKDTGGVLIELVE  128 (128)
T ss_pred             H--HHH-H-hcCCCceEEEEEEeCCHHHHHHHHHHCCCeeeccCCCccCCCCEEEEEecCCCceEEEEecC
Confidence            0  000 0 011247789999999999999999999999988775 33334445545555   99999975

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases.

>cd07252 BphC1-RGP6_N_like N-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=99.75  E-value=6.7e-17  Score=113.53  Aligned_cols=110  Identities=19%  Similarity=0.234  Sum_probs=78.3

Q ss_pred             eEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCC
Q 029933           28 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESD  107 (185)
Q Consensus        28 ~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~  107 (185)
                      ++.|++|.|+|+++|++||+++|||++..+..  . .  ..++..++.                 +..+.+...  ..  
T Consensus         2 ~l~~v~l~v~Dl~~s~~FY~~~LG~~~~~~~~--~-~--~~~~~~~~~-----------------~~~~~l~~~--~~--   55 (120)
T cd07252           2 SLGYLGVESSDLDAWRRFATDVLGLQVGDRPE--D-G--ALYLRMDDR-----------------AWRIAVHPG--EA--   55 (120)
T ss_pred             cccEEEEEeCCHHHHHHHHHhccCceeccCCC--C-C--eEEEEccCC-----------------ceEEEEEeC--CC--
Confidence            67899999999999999999999998865421  1 1  223332211                 234444211  10  


Q ss_pred             CCCCCCCCCCCCCCCceEEEEEeCC---HHHHHHHHHhcCCEEeecCC----CCccceEEEEECCCCcEEEEeecC
Q 029933          108 PDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPD----GGKLKGVAFIKDPDDYWIEIFDLK  176 (185)
Q Consensus       108 ~~~~~~~~~~~~~~g~~hi~~~v~d---v~~~~~~l~~~G~~~~~~~~----~~~~~~~~~~~DPdG~~iEl~~~~  176 (185)
                                   .++.|++|.+++   +++++++|+++|+++...+.    ....++.+||+|||||.||++...
T Consensus        56 -------------~~~~~~~f~v~~~~dl~~~~~~l~~~Gv~~~~~~~~~~~~~~~~~~~~~~DPdG~~iE~~~~~  118 (120)
T cd07252          56 -------------DDLAYAGWEVADEAALDALAARLRAAGVAVEEGSAELAAERGVEGLIRFADPDGNRHELFWGP  118 (120)
T ss_pred             -------------CceeEEEEEECCHHHHHHHHHHHHHcCCeEEEcCHHHHhhCCCcEEEEEECCCCCEEEEEecc
Confidence                         155799999974   89999999999999986542    122335799999999999998754

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the N-terminal, non-catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of 2,3-dihydroxybiphenyl 1,2-dioxygenases. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its N-

>cd09014 BphC-JF8_C_like C-terminal, catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=99.75  E-value=1.1e-16  Score=118.92  Aligned_cols=117  Identities=16%  Similarity=0.276  Sum_probs=79.8

Q ss_pred             eEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCC
Q 029933           28 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESD  107 (185)
Q Consensus        28 ~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~  107 (185)
                      +|+|++|.|+|++++++||+++|||++..............|+.....                 ...+.+..  ...  
T Consensus         6 ~i~Hi~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~i~l~~--~~~--   64 (166)
T cd09014           6 RLDHVNLLASDVDANRDFMEEVLGFRLREQIRLDNGKEAGAWMSVSNK-----------------VHDVAYTR--DPA--   64 (166)
T ss_pred             eeeeEEEEcCCHHHHHHHHHHccCCEEEEEEecCCCceEEEEEeCCCC-----------------ceeEEEec--CCC--
Confidence            799999999999999999999999998765432222222334432110                 12233321  110  


Q ss_pred             CCCCCCCCCCCCCCCceEEEEEeCC---HHHHHHHHHhcCCEEeecCCCCcc--ceEEEEECCCCcEEEEeec
Q 029933          108 PDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGKL--KGVAFIKDPDDYWIEIFDL  175 (185)
Q Consensus       108 ~~~~~~~~~~~~~~g~~hi~~~v~d---v~~~~~~l~~~G~~~~~~~~~~~~--~~~~~~~DPdG~~iEl~~~  175 (185)
                                ....+++||||.|+|   +++++++|+++|+++...|.....  ...+|++|||||+|||++.
T Consensus        65 ----------~~~~~~~hiaf~v~~~~~l~~~~~~l~~~Gv~i~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~  127 (166)
T cd09014          65 ----------GARGRLHHLAYALDTREDVLRAADIFLENGIFIEAGPGKHGIQQTFFLYVYEPGGNRVELFGG  127 (166)
T ss_pred             ----------CCCCCceEEEEECCCHHHHHHHHHHHHHcCCccccCCcccCCCCceEEEEECCCCCEEEEEEc
Confidence                      011257899999986   557889999999998766644322  2368999999999999987

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C. Th

>cd08343 ED_TypeI_classII_C C-terminal domain of type I, class II extradiol dioxygenases; catalytic domain

Probab=99.75  E-value=1.3e-16  Score=113.65  Aligned_cols=114  Identities=20%  Similarity=0.333  Sum_probs=82.1

Q ss_pred             EEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCCCC
Q 029933           30 QQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPD  109 (185)
Q Consensus        30 ~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~  109 (185)
                      +|++|.|+|++++++||+++||+++......+ .....+|+..+..                 ...+.+.....      
T Consensus         1 ~Hv~l~V~dl~~a~~Fy~~~lG~~~~~~~~~~-~~~~~~~~~~~~~-----------------~~~l~~~~~~~------   56 (131)
T cd08343           1 DHVVLRTPDVAATAAFYTEVLGFRVSDRVGDP-GVDAAAFLRCDED-----------------HHDLALFPGPE------   56 (131)
T ss_pred             CcEEEEcCCHHHHHHHHHhcCCCEEEEEEccC-CceeEEEEEcCCC-----------------cceEEEEcCCC------
Confidence            49999999999999999999999987664322 2234455554221                 23455432100      


Q ss_pred             CCCCCCCCCCCCCceEEEEEeCCHH---HHHHHHHhcCCEEeecCCCCc--cceEEEEECCCCcEEEEeecCc
Q 029933          110 FKGYHNGNSEPRGFGHIGITVDDVY---KACERFERLGVEFAKKPDGGK--LKGVAFIKDPDDYWIEIFDLKT  177 (185)
Q Consensus       110 ~~~~~~~~~~~~g~~hi~~~v~dv~---~~~~~l~~~G~~~~~~~~~~~--~~~~~~~~DPdG~~iEl~~~~~  177 (185)
                                ..++.|++|.|+|++   +++++++++|+++..++....  ..+.+||+|||||+|||++...
T Consensus        57 ----------~~~~~hl~~~v~d~~~~~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~~DPdG~~iei~~~~~  119 (131)
T cd08343          57 ----------RPGLHHVAFEVESLDDILRAADRLAANGIQIEFGPGRHGPGNNLFLYFRDPDGNRVELSAEMY  119 (131)
T ss_pred             ----------CCCeeEEEEEcCCHHHHHHHHHHHHHcCCeeEECCCccCCCCcEEEEEECCCCCEEEEEcCCc
Confidence                      126789999999864   688999999999987764322  2357899999999999998654

This family contains the C-terminal, catalytic domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this family are

>cd08354 Glo_EDI_BRP_like_13 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.74  E-value=1.3e-16  Score=111.64  Aligned_cols=120  Identities=18%  Similarity=0.266  Sum_probs=80.9

Q ss_pred             EEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCCC
Q 029933           29 MQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDP  108 (185)
Q Consensus        29 i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~  108 (185)
                      +.+++|.|.|++++++||+++|||++..+.   +..+  .++..++                  ...+.++.........
T Consensus         1 ~~~~~l~v~d~~~s~~Fy~~~lG~~~~~~~---~~~~--~~l~~~~------------------~~~~~l~~~~~~~~~~   57 (122)
T cd08354           1 ILETALYVDDLEAAEAFYEDVLGLELMLKE---DRRL--AFFWVGG------------------RGMLLLFDPGATSTPG   57 (122)
T ss_pred             CeEEEEEeCCHHHHHHHHHhccCCEEeecC---CCce--EEEEcCC------------------CcEEEEEecCCccccc
Confidence            468999999999999999999999988741   2222  3333322                  2234443321111000


Q ss_pred             CCCCCCCCCCCCCCceEEEEEe--CCHHHHHHHHHhcCCEEeecCCCCccceEEEEECCCCcEEEEeec
Q 029933          109 DFKGYHNGNSEPRGFGHIGITV--DDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDL  175 (185)
Q Consensus       109 ~~~~~~~~~~~~~g~~hi~~~v--~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~  175 (185)
                      ..  ..  .....+..|++|.+  +|++++++++.++|+++...+.....++.+|++|||||.|||+++
T Consensus        58 ~~--~~--~~~~~~~~~~~~~v~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~  122 (122)
T cd08354          58 GE--IP--PHGGSGPGHFAFAIPAEELAEWEAHLEAKGVAIESEVQWPRGGRSLYFRDPDGNLLELATP  122 (122)
T ss_pred             CC--CC--CCCCCCccEEEEEcCHHHHHHHHHHHHhcCCceeccccCCCCeeEEEEECCCCCEEEEecC
Confidence            00  00  01123668999999  489999999999999987766534455689999999999999864

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08348 BphC2-C3-RGP6_C_like The single-domain 2,3-dihydroxybiphenyl 1,2-dioxygenases (BphC, EC 1

Probab=99.74  E-value=1.7e-16  Score=113.17  Aligned_cols=120  Identities=23%  Similarity=0.372  Sum_probs=83.5

Q ss_pred             eEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCC
Q 029933           28 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESD  107 (185)
Q Consensus        28 ~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~  107 (185)
                      +|+|+.|.|+|++++++||+++||+++......  ..  ..++..+..                ....+.+........ 
T Consensus         1 ~i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~--~~--~~~~~~~~~----------------~~~~l~l~~~~~~~~-   59 (134)
T cd08348           1 RLSHVVLYVRDLEAMVRFYRDVLGFTVTDRGPL--GG--LVFLSRDPD----------------EHHQIALITGRPAAP-   59 (134)
T ss_pred             CeeEEEEEecCHHHHHHHHHHhcCCEEEeeccC--Cc--EEEEEecCC----------------CceEEEEEecCCCCC-
Confidence            589999999999999999999999998765321  12  334433200                034566653322110 


Q ss_pred             CCCCCCCCCCCCCCCceEEEEEeCCHH---HHHHHHHhcCCEEeecCCCCccceEEEEECCCCcEEEEeecCcc
Q 029933          108 PDFKGYHNGNSEPRGFGHIGITVDDVY---KACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTI  178 (185)
Q Consensus       108 ~~~~~~~~~~~~~~g~~hi~~~v~dv~---~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~~~  178 (185)
                               .....++.|++|.|+|++   +++++|.++|+++...+..+ .++.+|++||+||.|||++....
T Consensus        60 ---------~~~~~~~~h~~f~v~~~~~v~~~~~~l~~~G~~~~~~~~~~-~~~~~~~~DP~G~~ie~~~~~~~  123 (134)
T cd08348          60 ---------PPGPAGLNHIAFEVDSLDDLRDLYERLRAAGITPVWPVDHG-NAWSIYFRDPDGNRLELFVDTPW  123 (134)
T ss_pred             ---------CCCCCCceEEEEEeCCHHHHHHHHHHHHHCCCCccccCCCC-ceeEEEEECCCCCEEEEEEcCCC
Confidence                     011236789999998755   58899999999887655333 34679999999999999987653

13.11.39) from Rhodococcus globerulus P6, BphC2-RGP6 and BphC3-RGP6, and similar proteins. This subfamily contains Rhodococcus globerulus P6 BphC2-RGP6 and BphC3-RGP6, and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, yielding 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid. This is the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Most type I extradiol dioxygenases are activated by Fe(II). Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC2-RGP6 and BphC3-RGP6 are

>cd07240 ED_TypeI_classII_N N-terminal domain of type I, class II extradiol dioxygenases; non-catalytic domain

Probab=99.74  E-value=1e-16  Score=111.25  Aligned_cols=110  Identities=24%  Similarity=0.366  Sum_probs=80.9

Q ss_pred             eeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCC
Q 029933           27 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  106 (185)
Q Consensus        27 ~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~  106 (185)
                      ++++|+.|.|+|++++++||+++|||++.....  .    ..++..+..                .+..+.+...  .. 
T Consensus         1 ~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~--~----~~~~~~~~~----------------~~~~~~~~~~--~~-   55 (117)
T cd07240           1 RRIAYAELEVPDLERALEFYTDVLGLTVLDRDA--G----SVYLRCSED----------------DHHSLVLTEG--DE-   55 (117)
T ss_pred             CceeEEEEecCCHHHHHHHHHhccCcEEEeecC--C----eEEEecCCC----------------CcEEEEEEeC--CC-
Confidence            479999999999999999999999999887631  1    233333210                0233444221  10 


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEeC---CHHHHHHHHHhcCCEEeecCCC-CccceEEEEECCCCcEEEEeec
Q 029933          107 DPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDG-GKLKGVAFIKDPDDYWIEIFDL  175 (185)
Q Consensus       107 ~~~~~~~~~~~~~~~g~~hi~~~v~---dv~~~~~~l~~~G~~~~~~~~~-~~~~~~~~~~DPdG~~iEl~~~  175 (185)
                                    .+..|++|.|+   ++++++++++++|+++...+.. ...++.+|+.||+||.||++..
T Consensus        56 --------------~~~~h~~~~v~~~~~v~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~  114 (117)
T cd07240          56 --------------PGVDALGFEVASEEDLEALAAHLEAAGVAPEEASDPEPGVGRGLRFQDPDGHLLELFVE  114 (117)
T ss_pred             --------------CCceeEEEEcCCHHHHHHHHHHHHHcCCceEEcCccCCCCceEEEEECCCCCEEEEEEc
Confidence                          15689999997   6899999999999999887642 3344689999999999999864

This family contains the N-terminal, non-catalytic, domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this fa

>cd07238 Glo_EDI_BRP_like_5 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.74  E-value=2e-16  Score=109.48  Aligned_cols=109  Identities=22%  Similarity=0.348  Sum_probs=76.5

Q ss_pred             EEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCCCCC
Q 029933           31 QTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDF  110 (185)
Q Consensus        31 h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~  110 (185)
                      +..|.|+|++++++||+++|||++...    . .+...+...+.                 .+..+.+......      
T Consensus         3 ~~~l~v~Dl~~s~~FY~~~lG~~~~~~----~-~~~~~~~~~~~-----------------~~~~~~~~~~~~~------   54 (112)
T cd07238           3 VPNLPVADPEAAAAFYADVLGLDVVMD----H-GWIATFASPQN-----------------MTVQVSLATEGGT------   54 (112)
T ss_pred             cceEecCCHHHHHHHHHHhcCceEEEc----C-CceEEEeecCC-----------------CCcEEEEecCCCC------
Confidence            457899999999999999999998643    1 12122222111                 0234444321100      


Q ss_pred             CCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCEEeecCCCCccc-eEEEEECCCCcEEEEeecC
Q 029933          111 KGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIFDLK  176 (185)
Q Consensus       111 ~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~~~~~~~-~~~~~~DPdG~~iEl~~~~  176 (185)
                               .....|++|.|+|+++++++|+++|+++..++....++ +.+|+.|||||.|||++++
T Consensus        55 ---------~~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DP~Gn~i~~~~~~  112 (112)
T cd07238          55 ---------ATVVPDLSIEVDDVDAALARAVAAGFAIVYGPTDEPWGVRRFFVRDPFGKLVNILTHR  112 (112)
T ss_pred             ---------CCCCCEEEEEeCCHHHHHHHHHhcCCeEecCCccCCCceEEEEEECCCCCEEEEEEcC
Confidence                     01346999999999999999999999998877654433 6899999999999999763

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structure of this family is a that of a strand-swapped dimer.

>cd08359 Glo_EDI_BRP_like_22 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.73  E-value=2e-16  Score=110.40  Aligned_cols=115  Identities=17%  Similarity=0.180  Sum_probs=77.3

Q ss_pred             EEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCCCCC
Q 029933           31 QTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDF  110 (185)
Q Consensus        31 h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~  110 (185)
                      ++.|.|+|++++++||+++|||++....    ..+  ..+..++.                 ...+.+........ + .
T Consensus         4 ~~~l~v~D~~~s~~FY~~~lG~~~~~~~----~~~--~~~~~~~~-----------------~~~l~l~~~~~~~~-~-~   58 (119)
T cd08359           4 YPVIVTDDLAETADFYVRHFGFTVVFDS----DWY--VSLRSPDG-----------------GVELAFMLPGHETV-P-A   58 (119)
T ss_pred             eeEEEECCHHHHHHHHHHhhCcEEEecc----CcE--EEEecCCC-----------------ceEEEEccCCCCCC-c-c
Confidence            7889999999999999999999988651    112  22222110                 12344432111100 0 0


Q ss_pred             CCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCEEeecCCCCcc-ceEEEEECCCCcEEEEee
Q 029933          111 KGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKL-KGVAFIKDPDDYWIEIFD  174 (185)
Q Consensus       111 ~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~~~~~~-~~~~~~~DPdG~~iEl~~  174 (185)
                        .. ..... ...|++|.|+|+++++++++++|+++..+|...+. .+.++++|||||+|||+|
T Consensus        59 --~~-~~~~~-~~~~~~~~v~did~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DP~G~~ie~~~  119 (119)
T cd08359          59 --AQ-YQFQG-QGLILNFEVDDVDAEYERLKAEGLPIVLPLRDEPWGQRHFIVRDPNGVLIDIVQ  119 (119)
T ss_pred             --hh-cccCC-ceEEEEEEECCHHHHHHHHHhcCCCeeeccccCCCcceEEEEECCCCCEEEEEC
Confidence              00 00111 23499999999999999999999998877765443 468999999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd07239 BphC5-RK37_C_like C-terminal, catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacterium Rhodococcus rhodochrous K37 and similar proteins

Probab=99.73  E-value=2.6e-16  Score=114.29  Aligned_cols=111  Identities=18%  Similarity=0.343  Sum_probs=79.1

Q ss_pred             eEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCC
Q 029933           28 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESD  107 (185)
Q Consensus        28 ~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~  107 (185)
                      +++|+.|.|+|++++++||+++|||++.....  +   ...|+..+..                 +..+.+...  .   
T Consensus         4 ~l~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~--~---~~~~l~~~~~-----------------~~~~~l~~~--~---   56 (144)
T cd07239           4 KISHVVLNSPDVDKTVAFYEDVLGFRVSDWLG--D---QMAFLRCNSD-----------------HHSIAIARG--P---   56 (144)
T ss_pred             eeeEEEEECCCHHHHHHHHHhcCCCEEEEeeC--C---eEEEEECCCC-----------------cceEEEccC--C---
Confidence            89999999999999999999999999865421  1   1234443221                 233444211  0   


Q ss_pred             CCCCCCCCCCCCCCCceEEEEEeCCHHHHH---HHHHhcCCEEeecCCC-Cc-cceEEEEECCCCcEEEEeecCc
Q 029933          108 PDFKGYHNGNSEPRGFGHIGITVDDVYKAC---ERFERLGVEFAKKPDG-GK-LKGVAFIKDPDDYWIEIFDLKT  177 (185)
Q Consensus       108 ~~~~~~~~~~~~~~g~~hi~~~v~dv~~~~---~~l~~~G~~~~~~~~~-~~-~~~~~~~~DPdG~~iEl~~~~~  177 (185)
                                  ..++.|++|.|+|++++.   ++|+++|+++...+.. +. ....+||+||+||.|||++...
T Consensus        57 ------------~~~~~hiaf~v~d~~~l~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~yf~DPdG~~iE~~~~~~  119 (144)
T cd07239          57 ------------HPSLNHVAFEMPSIDEVMRGIGRMIDKGIDILWGPGRHGPGDNTFAYFLDPGGFVIEYTSELE  119 (144)
T ss_pred             ------------CCceEEEEEECCCHHHHHHHHHHHHHcCCceeeCCcccCCCCCEEEEEECCCCcEEEeccCce
Confidence                        126689999999877775   8999999998866532 22 2346899999999999988543

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the C-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dio

>PRK06724 hypothetical protein; Provisional

Probab=99.73  E-value=2.2e-16  Score=112.52  Aligned_cols=110  Identities=16%  Similarity=0.178  Sum_probs=74.0

Q ss_pred             ceeEEEEEEEeCChHHHHHHHHHhc---CCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecC
Q 029933           26 GYFMQQTMFRIKDPKVSLDFYSRVL---GMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNW  102 (185)
Q Consensus        26 ~~~i~h~~l~v~D~e~s~~FY~~~L---G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~  102 (185)
                      ..+++|+.|.|+|+++|++||+++|   |++......         +.. +                   ...+.+... 
T Consensus         5 ~~~i~Hv~l~V~Dle~s~~FY~~vlg~lg~~~~~~~~---------~~~-g-------------------~~~l~l~~~-   54 (128)
T PRK06724          5 RAGIHHIEFWVANLEESISFYDMLFSIIGWRKLNEVA---------YST-G-------------------ESEIYFKEV-   54 (128)
T ss_pred             CcccCEEEEEeCCHHHHHHHHHHHHhhCCcEEeeeEe---------eeC-C-------------------CeeEEEecC-
Confidence            3479999999999999999999976   555432111         100 0                   112222111 


Q ss_pred             CCCCCCCCCCCCCCCCCCCCceEEEEEe---CCHHHHHHHHHhcCCEEeecCCCC----ccceEEEEECCCCcEEEEeec
Q 029933          103 GTESDPDFKGYHNGNSEPRGFGHIGITV---DDVYKACERFERLGVEFAKKPDGG----KLKGVAFIKDPDDYWIEIFDL  175 (185)
Q Consensus       103 ~~~~~~~~~~~~~~~~~~~g~~hi~~~v---~dv~~~~~~l~~~G~~~~~~~~~~----~~~~~~~~~DPdG~~iEl~~~  175 (185)
                      ...       ..    ...+..|+||.|   +++++++++|+++|+++...|...    ++.+.+||+|||||.||++..
T Consensus        55 ~~~-------~~----~~~g~~h~af~v~~~~dvd~~~~~l~~~G~~~~~~p~~~~~~~~g~~~~~f~DPdG~~iEl~~~  123 (128)
T PRK06724         55 DEE-------IV----RTLGPRHICYQAINRKVVDEVAEFLSSTKIKIIRGPMEMNHYSEGYYTIDFYDPNGFIIEVAYT  123 (128)
T ss_pred             Ccc-------cc----CCCCceeEEEecCChHHHHHHHHHHHHCCCEEecCCcccCCCCCCEEEEEEECCCCCEEEEEeC
Confidence            100       00    012568999998   689999999999999998766431    223578899999999999876


Q ss_pred             C
Q 029933          176 K  176 (185)
Q Consensus       176 ~  176 (185)
                      .
T Consensus       124 ~  124 (128)
T PRK06724        124 P  124 (128)
T ss_pred             C
Confidence            3

>cd07267 THT_Oxygenase_N N-terminal domain of 2,4,5-trihydroxytoluene (THT) oxygenase

Probab=99.73  E-value=2.8e-16  Score=109.18  Aligned_cols=108  Identities=13%  Similarity=0.130  Sum_probs=75.9

Q ss_pred             eEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCC
Q 029933           28 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESD  107 (185)
Q Consensus        28 ~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~  107 (185)
                      ++.|+.|.|+|+++|++||++ |||++..+..  +    ..|+..++.                 ...+.+... +.   
T Consensus         3 ~l~hv~l~v~Dl~~s~~FY~~-lGl~~~~~~~--~----~~~~~~~~~-----------------~~~~~~~~~-~~---   54 (113)
T cd07267           3 DIAHVRFEHPDLDKAERFLTD-FGLEVAARTD--D----ELYYRGYGT-----------------DPFVYVARK-GE---   54 (113)
T ss_pred             EEEEEEEccCCHHHHHHHHHH-cCCEEEEecC--C----eEEEecCCC-----------------ccEEEEccc-CC---
Confidence            789999999999999999999 9998876521  1    223332110                 112222111 00   


Q ss_pred             CCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCEEeecCCCCccceEEEEECCCCcEEEEeec
Q 029933          108 PDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDL  175 (185)
Q Consensus       108 ~~~~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~  175 (185)
                                  ..++.|++|.|+|.+++.+.+++.|+.+...+.....++.+||+|||||.|||+.-
T Consensus        55 ------------~~~~~~~af~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~  110 (113)
T cd07267          55 ------------KARFVGAAFEAASRADLEKAAALPGASVIDDLEAPGGGKRVTLTDPDGFPVELVYG  110 (113)
T ss_pred             ------------cCcccEEEEEECCHHHHHHHHHcCCCeeecCCCCCCCceEEEEECCCCCEEEEEec
Confidence                        12668999999999999999999999877554322334679999999999999764

This subfamily contains the N-terminal, non-catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>cd07246 Glo_EDI_BRP_like_8 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.73  E-value=6.7e-16  Score=107.82  Aligned_cols=117  Identities=16%  Similarity=0.122  Sum_probs=81.6

Q ss_pred             EEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCCCCC
Q 029933           31 QTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDF  110 (185)
Q Consensus        31 h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~  110 (185)
                      -+.|.|+|++++.+||+++||+++..+.......+...++..+                   ...+.+.......  . .
T Consensus         4 ~~~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~-------------------~~~~~l~~~~~~~--~-~   61 (122)
T cd07246           4 TPYLIVRDAAAAIDFYKKAFGAEELERMPDDDGRVMHAELRIG-------------------DSVLMLADEFPEH--G-S   61 (122)
T ss_pred             eEEEEECCHHHHHHHHHHhhCCEEEEEEeCCCCCEEEEEEEEC-------------------CEEEEEecCCccc--C-C
Confidence            3568999999999999999999998775433333333334332                   2345554221100  0 0


Q ss_pred             CCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCEEeecCCCC-ccceEEEEECCCCcEEEEee
Q 029933          111 KGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGG-KLKGVAFIKDPDDYWIEIFD  174 (185)
Q Consensus       111 ~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~~~~-~~~~~~~~~DPdG~~iEl~~  174 (185)
                       +.    ....+..|++|.|+|++++++++.++|+++..++... +..+.++++|||||+|||.+
T Consensus        62 -~~----~~~~~~~~~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DP~G~~~~l~~  121 (122)
T cd07246          62 -PA----SWGGTPVSLHLYVEDVDATFARAVAAGATSVMPPADQFWGDRYGGVRDPFGHRWWIAT  121 (122)
T ss_pred             -CC----CCCCceEEEEEEeCCHHHHHHHHHHCCCeEecCcccccccceEEEEECCCCCEEEEec
Confidence             00    1122557999999999999999999999998887543 33468999999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>PF00903 Glyoxalase: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily This Prosite is specific to glyoxalases This Prosite is specific to Extradiol ring-cleavage dioxygenases This prints entry is specific to bleomycin resistance protein

Probab=99.73  E-value=1.6e-17  Score=116.50  Aligned_cols=121  Identities=28%  Similarity=0.362  Sum_probs=79.5

Q ss_pred             eEEEEEEEeCChHHHHHHHHHhcCCEEeeeeec--CCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCC
Q 029933           28 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDF--PEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE  105 (185)
Q Consensus        28 ~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~  105 (185)
                      +|+|++|.|+|++++++||+++|||++......  ........++..+                   ...+++.......
T Consensus         1 ~l~Hi~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~l~~~~~~~   61 (128)
T PF00903_consen    1 GLDHIAIRVKDLEKAIDFYTDVLGFRLVEESDNDGEGGDLRIAFLRIG-------------------EGHIELFLNPSPP   61 (128)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTTSEEEEEEEEESTTEEEEEEEEEST-------------------SSCEEEEEEESSS
T ss_pred             CeEEEEEEcCCHHHHHHHHHHHhCCcEEeeeccccccccccceeeccc-------------------ccceeeeeecccc
Confidence            589999999999999999999999999987651  2222333344432                   3455555443332


Q ss_pred             CCCCCCCCCCCCCCCCCceEEEEEeC---CHHHHHHHHHhcCCEEeecCCCCcc--ceEEEEECCCCcEEEE
Q 029933          106 SDPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDGGKL--KGVAFIKDPDDYWIEI  172 (185)
Q Consensus       106 ~~~~~~~~~~~~~~~~g~~hi~~~v~---dv~~~~~~l~~~G~~~~~~~~~~~~--~~~~~~~DPdG~~iEl  172 (185)
                      .....  ...  . ..+..|+++.+.   |+++++++|++.|+++...+.....  ...+|++||+||.|||
T Consensus        62 ~~~~~--~~~--~-~~~~~~i~~~~~~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~y~~Dp~G~~iE~  128 (128)
T PF00903_consen   62 PRASG--HSF--P-EHGGHHIAFLAFDVDDLDAAYERLKAQGVEIVEEPDRYYFGSGYSFYFRDPDGNLIEF  128 (128)
T ss_dssp             SSSEE--EHH--H-SHTSEEEEEEESSHHHHHHHHHHHHHTTGEEEEEEEEHSTTCEEEEEEEETTSEEEEE
T ss_pred             ccccc--ccc--c-cccceeEEEEeccHHHHHHHHHHHhhcCccEEecCCCCCCCCEEEEEEECCCCCEEEC
Confidence            21100  000  0 002356666665   6888999999999999987743222  2345799999999997

; InterPro: IPR004360 Glyoxalase I (4.4.1.5 from EC) (lactoylglutathione lyase) catalyzes the first step of the glyoxal pathway. S-lactoylglutathione is then converted by glyoxalase II to lactic acid []. Glyoxalase I is an ubiquitous enzyme which binds one mole of zinc per subunit. The bacterial and yeast enzymes are monomeric while the mammalian one is homodimeric. The sequence of glyoxalase I is well conserved. The domain represented by this entry is found in glyoxalase I and in other related proteins, including fosfomycin resistance proteins FosB [], FosA [], FosX [] and dioxygenases (eg. 4-hydroxyphenylpyruvate dioxygenase).; PDB: 1CJX_A 1NPB_E 3OJT_C 3OJN_A 2IG9_B 3OJJ_B 3OJK_D 1Q0C_D 1F1X_C 3BZA_B ....

>cd09012 Glo_EDI_BRP_like_24 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.72  E-value=1.6e-16  Score=112.09  Aligned_cols=120  Identities=18%  Similarity=0.132  Sum_probs=77.6

Q ss_pred             EEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCCC
Q 029933           29 MQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDP  108 (185)
Q Consensus        29 i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~  108 (185)
                      |+.+.|.|+|+++|++||++ |||++.......  .......+  +                  ...+.+........  
T Consensus         1 ~~~v~l~V~Dl~~s~~FY~~-lGf~~~~~~~~~--~~~~~~~~--~------------------~~~l~l~~~~~~~~--   55 (124)
T cd09012           1 MIFINLPVKDLEKSTAFYTA-LGFEFNPQFSDE--KAACMVIS--D------------------NIFVMLLTEDFFQT--   55 (124)
T ss_pred             CEEEEeecCCHHHHHHHHHH-CCCEEccccCCC--CeEEEEEC--C------------------ceEEEEEcHHHHhh--
Confidence            46899999999999999977 899876532211  11111111  1                  23444433211000  


Q ss_pred             CCCCCCCCCCCCCCceEEEEEeC---CHHHHHHHHHhcCCEEeecCCCCccceEEEEECCCCcEEEEee
Q 029933          109 DFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFD  174 (185)
Q Consensus       109 ~~~~~~~~~~~~~g~~hi~~~v~---dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~  174 (185)
                       +...........+..|++|.|+   ++++++++++++|+++..+|....+++.+||+|||||+|||+.
T Consensus        56 -~~~~~~~~~~~~~~~~l~f~v~~~~~vd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~DPdG~~ie~~~  123 (124)
T cd09012          56 -FTPKPIADTKKSTEVLISLSADSREEVDELVEKALAAGGKEFREPQDHGFMYGRSFADLDGHLWEVLW  123 (124)
T ss_pred             -ccCCCcccCCCCCeEEEEEeCCCHHHHHHHHHHHHHCCCcccCCcccCCceEEEEEECCCCCEEEEEE
Confidence             0000000011224569999998   5889999999999999988876665567899999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08361 PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=99.72  E-value=2.6e-16  Score=111.27  Aligned_cols=108  Identities=18%  Similarity=0.239  Sum_probs=77.3

Q ss_pred             eEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCC
Q 029933           28 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESD  107 (185)
Q Consensus        28 ~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~  107 (185)
                      ++.|+.|.|+|++++.+||+++|||++..+..    .  ..|+..+..                 +..+.+...  .   
T Consensus         6 ~l~~v~l~v~d~~~s~~FY~~vLG~~~~~~~~----~--~~~l~~~~~-----------------~~~i~l~~~--~---   57 (124)
T cd08361           6 DIAYVRLGTRDLAGATRFATDILGLQVAERTA----K--ATYFRSDAR-----------------DHTLVYIEG--D---   57 (124)
T ss_pred             EeeEEEEeeCCHHHHHHHHHhccCceeccCCC----C--eEEEEcCCc-----------------cEEEEEEeC--C---
Confidence            78999999999999999999999999875421    1  233432211                 233444211  0   


Q ss_pred             CCCCCCCCCCCCCCCceEEEEEeCC---HHHHHHHHHhcCCEEeecCCC----CccceEEEEECCCCcEEEEeecC
Q 029933          108 PDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDG----GKLKGVAFIKDPDDYWIEIFDLK  176 (185)
Q Consensus       108 ~~~~~~~~~~~~~~g~~hi~~~v~d---v~~~~~~l~~~G~~~~~~~~~----~~~~~~~~~~DPdG~~iEl~~~~  176 (185)
                                   .+..|++|.|++   +++++++|+++|+++...+..    ......+||+|||||.||++.+.
T Consensus        58 -------------~~~~~iaf~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~f~DPdG~~iE~~~~~  120 (124)
T cd08361          58 -------------PAEQASGFELRDDDALESAATELEQYGHEVRRGTAEECELRKVKAFIAFRDPSGNSIELVVRP  120 (124)
T ss_pred             -------------CceEEEEEEECCHHHHHHHHHHHHHcCCceEEcCHHHhhcCCcceEEEEECcCCCEEEEEEee
Confidence                         134799999985   999999999999998764421    22234679999999999998754

This subfamily contains the N-terminal, non-catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07261 Glo_EDI_BRP_like_11 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.72  E-value=4.2e-16  Score=108.04  Aligned_cols=110  Identities=23%  Similarity=0.373  Sum_probs=77.4

Q ss_pred             EEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCCCCCC
Q 029933           32 TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFK  111 (185)
Q Consensus        32 ~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~  111 (185)
                      +.|.|+|++++++||+++||+++....  +  .+..  +..++                  ...+.++.......     
T Consensus         2 ~~l~v~d~~~a~~FY~~~lg~~~~~~~--~--~~~~--~~~~~------------------~~~~~l~~~~~~~~-----   52 (114)
T cd07261           2 VLLYVEDPAASAEFYSELLGREPVELS--P--TFAL--FVLGS------------------GVKLGLWSRHTVEP-----   52 (114)
T ss_pred             EEEEECCHHHHHHHHHHHcCCCccCCC--C--ceEE--EEeCC------------------CcEEEEeeccccCC-----
Confidence            578999999999999999999977642  1  2222  22111                  23555543322110     


Q ss_pred             CCCCCCCCCCCceEEEEEeCC---HHHHHHHHHhcCCEEeecCCCCccceEEEEECCCCcEEEEee
Q 029933          112 GYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFD  174 (185)
Q Consensus       112 ~~~~~~~~~~g~~hi~~~v~d---v~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~  174 (185)
                       ..   ....+..|++|.|++   ++++++++.++|+++..+|....+++.++|+|||||.|||+.
T Consensus        53 -~~---~~~~~~~~~~~~v~~~~~~~~~~~~~~~~g~~v~~~~~~~~~g~~~~~~DPdGn~ie~~~  114 (114)
T cd07261          53 -AS---DATGGGSELAFMVDDGAAVDALYAEWQAKGVKIIQEPTEMDFGYTFVALDPDGHRLRVFA  114 (114)
T ss_pred             -CC---CCCCCceEEEEEcCCHHHHHHHHHHHHHCCCeEecCccccCCccEEEEECCCCCEEEeeC
Confidence             00   011255799999985   889999999999999988866556677999999999999963

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07244 FosA FosA, a Fosfomycin resistance protein, catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive

Probab=99.72  E-value=1.2e-16  Score=112.33  Aligned_cols=109  Identities=20%  Similarity=0.278  Sum_probs=77.1

Q ss_pred             eEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCC
Q 029933           28 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESD  107 (185)
Q Consensus        28 ~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~  107 (185)
                      +++|+.|.|+|++++++||+++||+++.....  +    ..++..+                   ...+.+......   
T Consensus         1 ~i~hv~l~v~d~~~~~~FY~~vLG~~~~~~~~--~----~~~~~~~-------------------~~~~~l~~~~~~---   52 (121)
T cd07244           1 GINHITLAVSDLERSVAFYVDLLGFKLHVRWD--K----GAYLEAG-------------------DLWLCLSVDANV---   52 (121)
T ss_pred             CcceEEEEECCHHHHHHHHHHhcCCEEEEecC--C----ceEEecC-------------------CEEEEEecCCCC---
Confidence            47899999999999999999999999876522  1    1222221                   122333211110   


Q ss_pred             CCCCCCCCCCCCCCCceEEEEEe--CCHHHHHHHHHhcCCEEeecCCCCccceEEEEECCCCcEEEEeecC
Q 029933          108 PDFKGYHNGNSEPRGFGHIGITV--DDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLK  176 (185)
Q Consensus       108 ~~~~~~~~~~~~~~g~~hi~~~v--~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~  176 (185)
                                ....+..|++|.+  +|+++++++++++|+++..++...  +..+||+|||||.|||++..
T Consensus        53 ----------~~~~~~~hi~f~v~~~dl~~~~~~l~~~G~~~~~~~~~~--~~~~~f~DPdG~~ie~~~~~  111 (121)
T cd07244          53 ----------GPAKDYTHYAFSVSEEDFASLKEKLRQAGVKEWKENTSE--GDSFYFLDPDGHKLELHVGS  111 (121)
T ss_pred             ----------CCCCCeeeEEEEeCHHHHHHHHHHHHHcCCcccCCCCCC--ccEEEEECCCCCEEEEEeCC
Confidence                      0012567999999  579999999999999987655432  35799999999999998754

This subfamily family contains FosA, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosA, catalyzes the addition of glutathione to the antibiotic fosfomycin, (1R,2S)-epoxypropylphosphonic acid, making it inactive. FosA is a Mn(II) dependent enzyme. It is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd08357 Glo_EDI_BRP_like_18 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.71  E-value=3.2e-16  Score=110.01  Aligned_cols=116  Identities=20%  Similarity=0.287  Sum_probs=72.2

Q ss_pred             EEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCCCCC
Q 029933           31 QTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDF  110 (185)
Q Consensus        31 h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~  110 (185)
                      |+.|.|+|+++|++||+++||+++.....    .+  ..+..+                   +..+.+........... 
T Consensus         2 Hi~l~v~Dl~~s~~FY~~~lG~~~~~~~~----~~--~~~~~~-------------------~~~~~l~~~~~~~~~~~-   55 (125)
T cd08357           2 HLAIPVRDLEAARAFYGDVLGCKEGRSSE----TW--VDFDFF-------------------GHQLVAHLSPNFNADAS-   55 (125)
T ss_pred             eEEEEeCCHHHHHHHHHHhcCCEEeeccC----Cc--cccccc-------------------CcEEEEEeccCCCcccc-
Confidence            89999999999999999999999865411    11  112111                   12233221111100000 


Q ss_pred             CCCCCCCCCCCCceEEE--EEeCCHHHHHHHHHhcCCEEeecCCC-----CccceEEEEECCCCcEEEEee
Q 029933          111 KGYHNGNSEPRGFGHIG--ITVDDVYKACERFERLGVEFAKKPDG-----GKLKGVAFIKDPDDYWIEIFD  174 (185)
Q Consensus       111 ~~~~~~~~~~~g~~hi~--~~v~dv~~~~~~l~~~G~~~~~~~~~-----~~~~~~~~~~DPdG~~iEl~~  174 (185)
                        .........+..|++  +.++|+++++++|+++|+++..+|..     ....+.+||+|||||.|||..
T Consensus        56 --~~~~~~~~~~~~h~~~~~~~~dv~~~~~~l~~~g~~~~~~p~~~~~~~~~~~~~~~~~DPdG~~iE~~~  124 (125)
T cd08357          56 --DNAVDGHPVPVPHFGLILSEEEFDALAERLEAAGVEFLIEPYTRFEGQPGEQETFFLKDPSGNALEFKA  124 (125)
T ss_pred             --cCCCCCCccCCceEEEEEeHHHHHHHHHHHHHCCCcEecCcceeccCCcCceeEEEEECCCCCEEEEee
Confidence              000001111345665  56689999999999999999876642     122367999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08362 BphC5-RrK37_N_like N-terminal, non-catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Rhodococcus rhodochrous K37, and similar proteins

Probab=99.71  E-value=5e-16  Score=108.47  Aligned_cols=109  Identities=17%  Similarity=0.205  Sum_probs=76.9

Q ss_pred             eEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCC
Q 029933           28 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESD  107 (185)
Q Consensus        28 ~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~  107 (185)
                      +|+|+.|.|+|++++++||+++|||++.....    .+  .++..++.                ....+.+.   ...  
T Consensus         3 ~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~----~~--~~~~~~~~----------------~~~~~~~~---~~~--   55 (120)
T cd08362           3 ALRGVGLGVPDLAAAAAFYREVWGLSVVAEDD----GI--VYLRATGS----------------EHHILRLR---RSD--   55 (120)
T ss_pred             eeeEEEEecCCHHHHHHHHHhCcCcEEEEecC----CE--EEEECCCC----------------ccEEEEec---cCC--
Confidence            78999999999999999999999999875421    22  23332110                01122221   110  


Q ss_pred             CCCCCCCCCCCCCCCceEEEEEe---CCHHHHHHHHHhcCCEEeecCC--C-CccceEEEEECCCCcEEEEeec
Q 029933          108 PDFKGYHNGNSEPRGFGHIGITV---DDVYKACERFERLGVEFAKKPD--G-GKLKGVAFIKDPDDYWIEIFDL  175 (185)
Q Consensus       108 ~~~~~~~~~~~~~~g~~hi~~~v---~dv~~~~~~l~~~G~~~~~~~~--~-~~~~~~~~~~DPdG~~iEl~~~  175 (185)
                                  ..+..|++|.|   +++++++++++++|+++...+.  . .+.++.+||+||+||.|||+..
T Consensus        56 ------------~~~~~~~~~~v~~~~~l~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~  117 (120)
T cd08362          56 ------------RNRLDVVSFSVASRADVDALARQVAARGGTVLSEPGATDDPGGGYGFRFFDPDGRLIEFSAD  117 (120)
T ss_pred             ------------CCCCceEEEEeCCHHHHHHHHHHHHHcCCceecCCcccCCCCCceEEEEECCCCCEEEEEec
Confidence                        01457999999   4799999999999999886652  1 2335678999999999999874

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the N-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dioxyge

>cd07266 HPCD_N_class_II N-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD); belongs to the type I class II family of extradiol dioxygenases

Probab=99.70  E-value=4e-16  Score=109.26  Aligned_cols=110  Identities=25%  Similarity=0.302  Sum_probs=76.6

Q ss_pred             eEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCC
Q 029933           28 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESD  107 (185)
Q Consensus        28 ~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~  107 (185)
                      ++.|+.|.|+|++++++||+++||+++.....    .+  .++......               .+..+.+...  .   
T Consensus         4 ~i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~~----~~--~~~~~~~~~---------------~~~~~~~~~~--~---   57 (121)
T cd07266           4 RLGHVELRVTDLEKSREFYVDVLGLVETEEDD----DR--IYLRGLEEF---------------IHHSLVLTKA--P---   57 (121)
T ss_pred             eeeEEEEEcCCHHHHHHHHHhccCCEEeccCC----Ce--EEEEecCCC---------------ceEEEEEeeC--C---
Confidence            79999999999999999999999999876521    12  222211000               0223333211  0   


Q ss_pred             CCCCCCCCCCCCCCCceEEEEEeC---CHHHHHHHHHhcCCEEeecCC-CC-ccceEEEEECCCCcEEEEeec
Q 029933          108 PDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPD-GG-KLKGVAFIKDPDDYWIEIFDL  175 (185)
Q Consensus       108 ~~~~~~~~~~~~~~g~~hi~~~v~---dv~~~~~~l~~~G~~~~~~~~-~~-~~~~~~~~~DPdG~~iEl~~~  175 (185)
                                  ..+..|++|.|.   |+++++++++++|+++...|. .. ..+..+|+.|||||.||++..
T Consensus        58 ------------~~~~~hi~~~v~~~~dv~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DPdG~~ve~~~~  118 (121)
T cd07266          58 ------------VAGLGHIAFRVRSEEDLDKAEAFFQELGLPTEWVEAGEEPGQGRALRVEDPLGFPIEFYAE  118 (121)
T ss_pred             ------------CCceeEEEEECCCHHHHHHHHHHHHHcCCCcccccCCcCCCCccEEEEECCCCCEEEEEec
Confidence                        025689999994   799999999999999876532 22 223579999999999999854

This subfamily contains the N-terminal, non-catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of extradiol dioxygenases. The class III 3,4-dihydroxyphenylacetate 2,3-dioxygenases belong to a differ

>PF12681 Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B 1JIF_B 1JIE_B 1QTO_A 3OXH_A 2PJS_A 2RBB_A 3SK1_B 3SK2_B 3RRI_A

Probab=99.70  E-value=2.5e-16  Score=107.91  Aligned_cols=107  Identities=25%  Similarity=0.394  Sum_probs=72.6

Q ss_pred             EEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCCCCCCCC
Q 029933           34 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGY  113 (185)
Q Consensus        34 l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~  113 (185)
                      |.|+|++++++||+++|||++.....    .+..+..+....                 .....+.......        
T Consensus         1 l~v~d~~~a~~FY~~~lg~~~~~~~~----~~~~~~~~~~~~-----------------~~~~~~~~~~~~~--------   51 (108)
T PF12681_consen    1 LPVSDLEAAAAFYEDVLGFEVVFDDP----DYVDFSLGFRFH-----------------DGVIEFLQFPDPP--------   51 (108)
T ss_dssp             EEESSHHHHHHHHHHTTTSEEEEEET----SEEEEEETEEEE-----------------EEEEEEEEEESSS--------
T ss_pred             CccCCHHHHHHHHHHhcCCEEEEeCC----CeEEEEeccchh-----------------hhhHHHccCCccc--------
Confidence            68999999999999999999998522    222222221000                 1122332221110        


Q ss_pred             CCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCEEeecCCCCcc-ceEEEEECCCCcEEEEe
Q 029933          114 HNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKL-KGVAFIKDPDDYWIEIF  173 (185)
Q Consensus       114 ~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~~~~~~-~~~~~~~DPdG~~iEl~  173 (185)
                          ....+..|++|.|+|+++++++++++|+++..+|....+ .+.+++.|||||+|||+
T Consensus        52 ----~~~~~~~~~~~~v~dv~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~ie~~  108 (108)
T PF12681_consen   52 ----GPPGGGFHLCFEVEDVDALYERLKELGAEIVTEPRDDPWGQRSFYFIDPDGNRIEFC  108 (108)
T ss_dssp             ----SSSSSEEEEEEEESHHHHHHHHHHHTTSEEEEEEEEETTSEEEEEEE-TTS-EEEEE
T ss_pred             ----cCCCceeEEEEEEcCHHHHHHHHHHCCCeEeeCCEEcCCCeEEEEEECCCCCEEEeC
Confidence                112366899999999999999999999999887755433 36899999999999986

...

>cd07235 MRD Mitomycin C resistance protein (MRD)

Probab=99.70  E-value=4.5e-16  Score=109.18  Aligned_cols=116  Identities=19%  Similarity=0.233  Sum_probs=73.7

Q ss_pred             EEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCC-C
Q 029933           29 MQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES-D  107 (185)
Q Consensus        29 i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~-~  107 (185)
                      |+|++|.|+|+++|++||+. |||++.....  ...  ...+..++                  ...+.+........ .
T Consensus         1 ~~~i~l~V~D~~~a~~FY~~-LGf~~~~~~~--~~~--~~~~~~~~------------------~~~l~l~~~~~~~~~~   57 (122)
T cd07235           1 LDAVGIVVADMAKSLDFYRR-LGFDFPEEAD--DEP--HVEAVLPG------------------GVRLAWDTVESIRSFT   57 (122)
T ss_pred             CceEEEEeccHHHHHHHHHH-hCceecCCcC--CCC--cEEEEeCC------------------CEEEEEEcccceeeec
Confidence            57999999999999999975 9998765421  111  11122111                  12232211100000 0


Q ss_pred             CCCCCCCCCCCCCCCceEEEEEeC---CHHHHHHHHHhcCCEEeecCCCCccc-eEEEEECCCCcEEEEe
Q 029933          108 PDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIF  173 (185)
Q Consensus       108 ~~~~~~~~~~~~~~g~~hi~~~v~---dv~~~~~~l~~~G~~~~~~~~~~~~~-~~~~~~DPdG~~iEl~  173 (185)
                      +.   ..   ....+..|++|.|+   |+++++++|+++|+++..+|....++ +.++|+|||||.|||+
T Consensus        58 ~~---~~---~~~~~~~~l~~~~~~~~dvd~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~  121 (122)
T cd07235          58 PG---WT---PTGGHRIALAFLCETPAEVDALYAELVGAGYPGHKEPWDAPWGQRYAIVKDPDGNLVDLF  121 (122)
T ss_pred             CC---CC---CCCCCcEEEEEEcCCHHHHHHHHHHHHHCCCCcCCCCccCCCCCEEEEEECCCCCEEEEe
Confidence            00   00   01124468889875   79999999999999988877654444 6789999999999997

Mitomycin C (MC) is a naturally occurring antibiotic, and antitumor agent used in the treatment of cancer. Its antitumor activity is exerted primarily through monofunctional and bifunctional alkylation of DNA. MRD binds to MC and functions as a component of the MC exporting system. MC is bound to MRD by a stacking interaction between a His and a Trp. MRD adopts a structural fold similar to bleomycin resistance protein, glyoxalase I, and extradiol dioxygenases; and it has binding sites at an identical location to binding sites in these evolutionarily related enzymes.

>PLN02300 lactoylglutathione lyase

Probab=99.70  E-value=1e-15  Score=123.09  Aligned_cols=127  Identities=31%  Similarity=0.545  Sum_probs=93.8

Q ss_pred             eEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCC
Q 029933           28 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESD  107 (185)
Q Consensus        28 ~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~  107 (185)
                      ++.|+.|.|+|++++.+||+++|||++......++.++...++.+++..               ....+++....+... 
T Consensus       154 ~~~~~~l~~~d~~~a~~Fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~lel~~~~~~~~-  217 (286)
T PLN02300        154 PLCQVMLRVGDLDRSIKFYEKAFGMKLLRKRDNPEYKYTIAMMGYGPED---------------KTTVLELTYNYGVTE-  217 (286)
T ss_pred             cceeEEEEeCCHHHHHHHHHhccCCEEEeeecccccceEEEEEecCCCC---------------CccEEEEeecCCCCc-
Confidence            7889999999999999999999999998654444445666666542210               023566644322211 


Q ss_pred             CCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCEEeecCCCCc--cceEEEEECCCCcEEEEeecCccc
Q 029933          108 PDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGK--LKGVAFIKDPDDYWIEIFDLKTIG  179 (185)
Q Consensus       108 ~~~~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~~~~~--~~~~~~~~DPdG~~iEl~~~~~~~  179 (185)
                           +..+    .++.|++|.|+|+++++++++++|+++..+|...+  .++.++|+|||||.|+|++...+-
T Consensus       218 -----~~~g----~~~~~i~~~v~di~~~~~~~~~~G~~v~~~p~~~p~~~~~~~~~~DPdG~~i~~~~~~~~~  282 (286)
T PLN02300        218 -----YTKG----NAYAQIAIGTDDVYKTAEAIKLVGGKITREPGPLPGINTKITACLDPDGWKTVFVDNIDFL  282 (286)
T ss_pred             -----cccC----CceeEEEEecCCHHHHHHHHHHcCCeEecCCccCCCCceEEEEEECCCCCEEEEEccchhh
Confidence                 2222    26789999999999999999999999998775433  235788999999999999987754

>cd08345 Fosfomycin_RP Fosfomycin resistant protein; inhibits the biological function of fosfomycin

Probab=99.70  E-value=5.2e-16  Score=107.24  Aligned_cols=107  Identities=21%  Similarity=0.310  Sum_probs=74.3

Q ss_pred             EEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCCCCC
Q 029933           31 QTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDF  110 (185)
Q Consensus        31 h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~  110 (185)
                      |++|.|+|++++++||+++||+++..+..  .    ..++..+                   ...+.+...... .    
T Consensus         1 Hv~l~v~d~~~s~~Fy~~~lg~~~~~~~~--~----~~~~~~~-------------------~~~l~~~~~~~~-~----   50 (113)
T cd08345           1 HITLIVKDLNKSIAFYRDILGAELIYSSS--K----EAYFELA-------------------GLWICLMEEDSL-Q----   50 (113)
T ss_pred             CeeEEECCHHHHHHHHHHhcCCeeeeccC--c----eeEEEec-------------------CeEEEeccCCCc-C----
Confidence            78999999999999999999999876531  1    1222211                   123333221110 0    


Q ss_pred             CCCCCCCCCCCCceEEEEEeC--CHHHHHHHHHhcCCEEeecC-CCCccceEEEEECCCCcEEEEee
Q 029933          111 KGYHNGNSEPRGFGHIGITVD--DVYKACERFERLGVEFAKKP-DGGKLKGVAFIKDPDDYWIEIFD  174 (185)
Q Consensus       111 ~~~~~~~~~~~g~~hi~~~v~--dv~~~~~~l~~~G~~~~~~~-~~~~~~~~~~~~DPdG~~iEl~~  174 (185)
                        .     ...++.|++|.|+  ++++++++++++|+++.... .....++.+|++|||||.|||+.
T Consensus        51 --~-----~~~~~~hiaf~v~~~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DPdG~~iEi~~  110 (113)
T cd08345          51 --G-----PERTYTHIAFQIQSEEFDEYTERLKALGVEMKPERPRVQGEGRSIYFYDPDGHLLELHA  110 (113)
T ss_pred             --C-----CCCCccEEEEEcCHHHHHHHHHHHHHcCCccCCCccccCCCceEEEEECCCCCEEEEEe
Confidence              0     1125689999995  79999999999999987543 22334568999999999999985

This family contains three types of fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. The three types of fosfomycin resistance proteins, employ different mechanisms to render fosfomycin [(1R,2S)-epoxypropylphosphonic acid] inactive. FosB catalyzes the addition of L-cysteine to the epoxide ring of fosfomycin. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1. FosA catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive. Catalytic activities of both FosX and FosA are Mn(II)-dependent, but FosB is activated by Mg(II). Fosfomycin resistant proteins are evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>TIGR03211 catechol_2_3 catechol 2,3 dioxygenase

Probab=99.70  E-value=9.7e-16  Score=123.89  Aligned_cols=115  Identities=19%  Similarity=0.299  Sum_probs=78.8

Q ss_pred             ceeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCce-EEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCC
Q 029933           26 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKF-SLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT  104 (185)
Q Consensus        26 ~~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~  104 (185)
                      ..+|+|++|.|+|++++++||+++|||++..+...+.... ...|+..+..                 ...+.+...   
T Consensus       143 ~~~i~Hi~l~V~Dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~---  202 (303)
T TIGR03211       143 ARRLDHCLLYGEDVAENTRFFTEVLGFRLTEQVVLGDGKEQAAAWLSVSNK-----------------AHDIAFVGD---  202 (303)
T ss_pred             ceeEEEEeEEeCCHHHHHHHHHHhcCCEEEeeEEcCCCcEEEEEEEEcCCC-----------------CcccceecC---
Confidence            3579999999999999999999999999876543322221 2334432110                 112222100   


Q ss_pred             CCCCCCCCCCCCCCCCCCceEEEEEeCC---HHHHHHHHHhcCCEEeecCCCCc--cceEEEEECCCCcEEEEe
Q 029933          105 ESDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGK--LKGVAFIKDPDDYWIEIF  173 (185)
Q Consensus       105 ~~~~~~~~~~~~~~~~~g~~hi~~~v~d---v~~~~~~l~~~G~~~~~~~~~~~--~~~~~~~~DPdG~~iEl~  173 (185)
                                   ...+.++||||.|+|   +++++++|+++|+++...|....  .+..+||+|||||.||++
T Consensus       203 -------------~~~g~~~Hiaf~v~~~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iEl~  263 (303)
T TIGR03211       203 -------------PEPGKLHHVSFFLDSWEDVLKAADVMSKNDVSIDIGPTRHGITRGQTIYFFDPSGNRNETF  263 (303)
T ss_pred             -------------CCCCceEEEEEEcCCHHHHHHHHHHHHhCCCceeeCCcccCCCCceEEEEECCCCCEEEEe
Confidence                         011247899999996   55578899999999887764332  245899999999999998

Members of this family all are enzymes active as catechol 2,3 dioxygenase (1.13.11.2), although some members have highly significant activity on catechol derivatives such as 3-methylcatechol, 3-chlorocatechol, and 4-chlorocatechol (see Mars, et al.). This enzyme is also called metapyrocatechase, as it performs a meta-cleavage (an extradiol ring cleavage), in contrast to the ortho-cleavage (intradiol ring cleavage)performed by catechol 1,2-dioxygenase (EC 1.13.11.1), also called pyrocatechase.

>cd08344 MhqB_like_N N-terminal domain of MhqB, a type I extradiol dioxygenase, and similar proteins

Probab=99.69  E-value=8.2e-16  Score=106.63  Aligned_cols=109  Identities=18%  Similarity=0.283  Sum_probs=72.0

Q ss_pred             eEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCC
Q 029933           28 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESD  107 (185)
Q Consensus        28 ~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~  107 (185)
                      +|.|++|.|.|++++++||+ +|||++..+.   + .  ..+...+..                 +..+.+...  ..  
T Consensus         2 ~i~hv~l~v~d~~~s~~FY~-~lG~~~~~~~---~-~--~~~~~~~~~-----------------~~~~~~~~~--~~--   53 (112)
T cd08344           2 SIDHFALEVPDLEVARRFYE-AFGLDVREEG---D-G--LELRTAGND-----------------HRWARLLEG--AR--   53 (112)
T ss_pred             ceeEEEEecCCHHHHHHHHH-HhCCcEEeec---C-c--eEEEecCCC-----------------ceEEEeecC--CC--
Confidence            68999999999999999997 6999987542   1 1  122221110                 122333211  10  


Q ss_pred             CCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCEEeecCCCCccceEEEEECCCCcEEEEeecC
Q 029933          108 PDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLK  176 (185)
Q Consensus       108 ~~~~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~  176 (185)
                                 ......++.+.++|+++++++|+++|+++..++.. ...+.+||.|||||.|||..-.
T Consensus        54 -----------~~~~~~~~~~~~~d~~~~~~~l~~~Gi~~~~~~~~-~~~~~~~~~DP~Gn~iel~~~~  110 (112)
T cd08344          54 -----------KRLAYLSFGIFEDDFAAFARHLEAAGVALAAAPPG-ADPDGVWFRDPDGNLLQVKVAE  110 (112)
T ss_pred             -----------CceeeEEEEeEhhhHHHHHHHHHHcCCceecCCCc-CCCCEEEEECCCCCEEEEecCC
Confidence                       00122344555689999999999999998776522 2234699999999999998643

This subfamily contains the N-terminal, non-catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd08349 BLMA_like Bleomycin binding protein (BLMA) and similar proteins; BLMA confers bleomycin (Bm) resistance by directly binding to Bm

Probab=99.69  E-value=2.1e-15  Score=103.71  Aligned_cols=108  Identities=23%  Similarity=0.308  Sum_probs=75.9

Q ss_pred             EEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCCCCCCC
Q 029933           33 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKG  112 (185)
Q Consensus        33 ~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~  112 (185)
                      .|.|+|++++++||+++|||++.....  ...+  .++..+                   ...+.+........      
T Consensus         3 ~i~v~d~~~s~~FY~~~lg~~~~~~~~--~~~~--~~~~~~-------------------~~~~~l~~~~~~~~------   53 (112)
T cd08349           3 VLPVSDIERSLAFYRDVLGFEVDWEHP--EPGY--AFLSRG-------------------GAQLMLSEHDGDEP------   53 (112)
T ss_pred             EEEECCHHHHHHHHHhccCeEEEEEcC--CCcE--EEEEeC-------------------CEEEEEeccCCCCC------
Confidence            688999999999999999999877632  1222  233321                   34566543321110      


Q ss_pred             CCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCE-EeecCCCCcc-ceEEEEECCCCcEEEEee
Q 029933          113 YHNGNSEPRGFGHIGITVDDVYKACERFERLGVE-FAKKPDGGKL-KGVAFIKDPDDYWIEIFD  174 (185)
Q Consensus       113 ~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~-~~~~~~~~~~-~~~~~~~DPdG~~iEl~~  174 (185)
                      .     ...+..|++|.++|+++++++++++|+. +..++..... .+.+|++||+||.|||+|
T Consensus        54 ~-----~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~~DP~G~~ie~~~  112 (112)
T cd08349          54 V-----PLGRGGSVYIEVEDVDALYAELKAKGADLIVYPPEDQPWGMREFAVRDPDGNLLRFGE  112 (112)
T ss_pred             C-----CCCCcEEEEEEeCCHHHHHHHHHHcCCcceecCccCCCcccEEEEEECCCCCEEEecC
Confidence            0     1124569999999999999999999998 5555543333 367999999999999976

BLMA also called Bleomycin resistance protein, confers Bm resistance by directly binding to Bm. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMA is produced by actinomycetes to protect themselves against their own lethal compound. BLMA has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMAs are dimers and each dimer binds to two Bm molecules at the Bm-binding pockets formed at the dimer interface; two Bm molecules are bound per dimer. BLMA belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. As for the large

>cd07254 Glo_EDI_BRP_like_20 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.69  E-value=2.6e-15  Score=105.04  Aligned_cols=110  Identities=25%  Similarity=0.381  Sum_probs=76.0

Q ss_pred             EEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCCCC
Q 029933           30 QQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPD  109 (185)
Q Consensus        30 ~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~  109 (185)
                      .|+.|.|+|++++++||+++||++...+..    .. ..|...+.                  ...+.+...  ...   
T Consensus         3 ~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~----~~-~~~~~~~~------------------~~~~~~~~~--~~~---   54 (120)
T cd07254           3 FHVALNVDDLEASIAFYSKLFGVEPTKVRD----DY-AKFLLEDP------------------RLNFVLNER--PGA---   54 (120)
T ss_pred             EEEEEEeCCHHHHHHHHHHHhCCeEecccC----Ce-eEEEecCC------------------ceEEEEecC--CCC---
Confidence            499999999999999999999998765521    11 22221110                  122323211  100   


Q ss_pred             CCCCCCCCCCCCCceEEEEEeCC---HHHHHHHHHhcCCEEeecCCCCc---cceEEEEECCCCcEEEEeecC
Q 029933          110 FKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGK---LKGVAFIKDPDDYWIEIFDLK  176 (185)
Q Consensus       110 ~~~~~~~~~~~~g~~hi~~~v~d---v~~~~~~l~~~G~~~~~~~~~~~---~~~~~~~~DPdG~~iEl~~~~  176 (185)
                         .      ..+..|++|.|++   +++++++|+++|+++...+....   ..+.+|++||+||.|||+++.
T Consensus        55 ---~------~~~~~h~~f~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~  118 (120)
T cd07254          55 ---P------GGGLNHLGVQVDSAEEVAEAKARAEAAGLPTFKEEDTTCCYAVQDKVWVTDPDGNAWEVFVTL  118 (120)
T ss_pred             ---C------CCCeeEEEEEeCCHHHHHHHHHHHHHcCCeEEccCCcccccCCcceEEEECCCCCEEEEEEee
Confidence               0      0266899999987   88899999999999887664322   235799999999999999854

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and types I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07262 Glo_EDI_BRP_like_19 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.69  E-value=1.7e-15  Score=106.33  Aligned_cols=112  Identities=16%  Similarity=0.119  Sum_probs=76.5

Q ss_pred             EEEEEEEeCChHHHHHHHHHh---cCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCC
Q 029933           29 MQQTMFRIKDPKVSLDFYSRV---LGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE  105 (185)
Q Consensus        29 i~h~~l~v~D~e~s~~FY~~~---LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~  105 (185)
                      +.|++|.|+|+++|++||+++   ||+++..+.   ...+ ..+...+.                  ...+.+.......
T Consensus         1 l~hv~l~v~d~~~s~~FY~~~f~~lg~~~~~~~---~~~~-~~~~~~~~------------------~~~~~l~~~~~~~   58 (123)
T cd07262           1 IDHVTLGVNDLERARAFYDAVLAPLGIKRVMED---GPGA-VGYGKGGG------------------GPDFWVTKPFDGE   58 (123)
T ss_pred             CcEEEEecCcHHHHHHHHHHHHhhcCceEEeec---CCce-eEeccCCC------------------CceEEEeccccCC
Confidence            479999999999999999999   699887653   1122 22222110                  3456664332111


Q ss_pred             CCCCCCCCCCCCCCCCCceEEEEEeCC---HHHHHHHHHhcCCEEeecCCCC----ccceEEEEECCCCcEEEEe
Q 029933          106 SDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGG----KLKGVAFIKDPDDYWIEIF  173 (185)
Q Consensus       106 ~~~~~~~~~~~~~~~~g~~hi~~~v~d---v~~~~~~l~~~G~~~~~~~~~~----~~~~~~~~~DPdG~~iEl~  173 (185)
                      .      .     ...+..||+|.|++   ++++++++.++|+.+..+|...    ...+.+||+|||||.|||+
T Consensus        59 ~------~-----~~~~~~hi~f~v~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~DPdG~~ie~~  122 (123)
T cd07262          59 P------A-----TAGNGTHVAFAAPSREAVDAFHAAALAAGGTDEGAPGLRPHYGPGYYAAYVRDPDGNKIEAV  122 (123)
T ss_pred             C------C-----CCCCceEEEEECCCHHHHHHHHHHHHHcCCccCCCCCCCCCCCCCeEEEEEECCCCCEEEEe
Confidence            0      0     11134699999986   7889999999999988776432    2234689999999999997

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08350 BLMT_like BLMT, a bleomycin resistance protein encoded on the transposon Tn5, and similar proteins

Probab=99.68  E-value=1.6e-15  Score=106.37  Aligned_cols=107  Identities=16%  Similarity=0.130  Sum_probs=74.4

Q ss_pred             EEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCCCCC
Q 029933           31 QTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDF  110 (185)
Q Consensus        31 h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~  110 (185)
                      ..+|.|+|+++|++||++ |||++..+..  . .|  .++..+                   ...+++.......     
T Consensus         5 ~~~l~v~Dl~~s~~FY~~-lG~~~~~~~~--~-~~--~~~~~~-------------------~~~l~l~~~~~~~-----   54 (120)
T cd08350           5 IPNLPSRDLDATEAFYAR-LGFSVGYRQA--A-GY--MILRRG-------------------DLELHFFAHPDLD-----   54 (120)
T ss_pred             cceeEcCCHHHHHHHHHH-cCCEEEecCC--C-CE--EEEEcC-------------------CEEEEEEecCcCC-----
Confidence            568999999999999999 9999876532  1 23  223221                   3356665321110     


Q ss_pred             CCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCEEe-------ecCCC-CccceEEEEECCCCcEEEEeec
Q 029933          111 KGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFA-------KKPDG-GKLKGVAFIKDPDDYWIEIFDL  175 (185)
Q Consensus       111 ~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~-------~~~~~-~~~~~~~~~~DPdG~~iEl~~~  175 (185)
                       +.       ....|++|.|+|+++++++|+++|+++.       .++.. .++.+.+||+|||||+|||.|.
T Consensus        55 -~~-------~~~~~~~~~v~dvd~~~~~l~~~G~~~~~~~~~~~~~~~~~~~g~~~~~~~DPdG~~ie~~~~  119 (120)
T cd08350          55 -PA-------TSPFGCCLRLPDVAALHAEFRAAGLPETGSGIPRITPPEDQPWGMREFALVDPDGNLLRFGQP  119 (120)
T ss_pred             -CC-------CCcceEEEEeCCHHHHHHHHHHhCccccccCCCcccCCcCCCCceeEEEEECCCCCEEEeecC
Confidence             00       1235899999999999999999999853       23332 2344689999999999999874

BLMT is a bleomycin (Bm) resistance protein, encoded by the ble gene on the transposon Tn5. This protein confers a survival advantage to Escherichia coli host cells. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMT has strong binding affinity to Bm and it protects against this lethal compound through drug sequestering. BLMT has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMT is a dimer with two Bm-binding pockets formed at the dimer interface.

>cd06587 Glo_EDI_BRP_like This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

Probab=99.67  E-value=2.4e-15  Score=101.95  Aligned_cols=111  Identities=29%  Similarity=0.377  Sum_probs=81.7

Q ss_pred             EEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCCCCC
Q 029933           31 QTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDF  110 (185)
Q Consensus        31 h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~  110 (185)
                      |++|.|+|++++.+||+++||++.........  ....++..+                   ...+++....+...    
T Consensus         1 Hi~i~~~d~~~~~~fy~~~lg~~~~~~~~~~~--~~~~~~~~~-------------------~~~i~l~~~~~~~~----   55 (112)
T cd06587           1 HVGLTVSDLEAAVAFYEEVLGFEVLFRNGNGG--AEFAVLGLG-------------------GTRLELFEGDEPAP----   55 (112)
T ss_pred             CcceeeCCHHHHHHHHHhccCCEEEEeeccCC--EEEEEEecC-------------------CceEEEecCCCCCC----
Confidence            78999999999999999999999888753211  233334322                   35677765432211    


Q ss_pred             CCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCEEeecCC-CCccceEEEEECCCCcEEEE
Q 029933          111 KGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD-GGKLKGVAFIKDPDDYWIEI  172 (185)
Q Consensus       111 ~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~~-~~~~~~~~~~~DPdG~~iEl  172 (185)
                        .    ....+..|++|.|+|+++++++|+++|+.+...+. .......+|+.||+||.|||
T Consensus        56 --~----~~~~~~~~~~~~v~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~Dp~G~~~~~  112 (112)
T cd06587          56 --A----PSGGGGVHLAFEVDDVDAAYERLKAAGVEVLGEPREEPWGGRVAYFRDPDGNLIEL  112 (112)
T ss_pred             --c----ccCCCeeEEEEECCCHHHHHHHHHHcCCcccCCCcCCCCCcEEEEEECCCCcEEeC
Confidence              0    11236689999999999999999999999887764 34445689999999999986

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain clas

>cd07258 PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=99.67  E-value=2.9e-15  Score=108.48  Aligned_cols=111  Identities=16%  Similarity=0.178  Sum_probs=77.0

Q ss_pred             EEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCCCC
Q 029933           30 QQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPD  109 (185)
Q Consensus        30 ~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~  109 (185)
                      .|+.|.|+|++++++||+++|||++..+..  +   ...|+......               .+..+.+.    .     
T Consensus         1 ~Hv~l~V~Dle~s~~Fy~~vLG~~~~~~~~--~---~~~~l~~~~~~---------------~~h~~~~~----~-----   51 (141)
T cd07258           1 GHVVIGSENFEASRDSLVEDFGFRVSDLIE--D---RIVFMRCHPNP---------------FHHTFAVG----P-----   51 (141)
T ss_pred             CcEEEecCCHHHHHHHHHhcCCCEeeeeeC--C---EEEEEEcCCCC---------------Ccceeeec----c-----
Confidence            389999999999999999999999876632  1   23444422110               01122211    0     


Q ss_pred             CCCCCCCCCCCCCceEEEEEeCC---HHHHHHHHHhcCCEEeecCCCC--ccceEEEEECCCCcEEEEeecCc
Q 029933          110 FKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGG--KLKGVAFIKDPDDYWIEIFDLKT  177 (185)
Q Consensus       110 ~~~~~~~~~~~~g~~hi~~~v~d---v~~~~~~l~~~G~~~~~~~~~~--~~~~~~~~~DPdG~~iEl~~~~~  177 (185)
                              ....+++||+|.|+|   +++++++|+++|+++...|...  ...+.+||+||||+.||+.....
T Consensus        52 --------~~~~gl~Hiaf~v~~~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~~~  116 (141)
T cd07258          52 --------ASSSHFHHVNFMVTDIDDIGKALYRIKAHDVKVVFGPGRHPPSDSIFFYFLDPDGITVEYSFGME  116 (141)
T ss_pred             --------CCCCceEEEEEECCCHHHHHHHHHHHHHCCCcEEeCCceECCCCCEEEEEECCCCCEEEEEeCcc
Confidence                    112378999999986   4567999999999987766432  22357899999999999976543

This subfamily contains the C-terminal, catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as for other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>TIGR02295 HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase

Probab=99.66  E-value=4.6e-15  Score=119.35  Aligned_cols=118  Identities=22%  Similarity=0.337  Sum_probs=79.2

Q ss_pred             CceeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCC
Q 029933           25 NGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT  104 (185)
Q Consensus        25 ~~~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~  104 (185)
                      ...+|+|++|.|+|++++++||+++|||++..........+...++.....                 +..+.+..  . 
T Consensus       133 ~~~~i~Hv~l~v~dl~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~--~-  192 (294)
T TIGR02295       133 SPVRLDHFNVFVPDVQRALRFYKEELGFRVTEYTEDDEGNLAAAWLHRKGG-----------------VHDIALTN--G-  192 (294)
T ss_pred             cceeeeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCcEEEEEEecCCC-----------------cCceEeec--C-
Confidence            345899999999999999999999999998765432222322333322110                 12233210  0 


Q ss_pred             CCCCCCCCCCCCCCCCCCceEEEEEeCC---HHHHHHHHHhcCCE--EeecCCCCc--cceEEEEECCCCcEEEEeecC
Q 029933          105 ESDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVE--FAKKPDGGK--LKGVAFIKDPDDYWIEIFDLK  176 (185)
Q Consensus       105 ~~~~~~~~~~~~~~~~~g~~hi~~~v~d---v~~~~~~l~~~G~~--~~~~~~~~~--~~~~~~~~DPdG~~iEl~~~~  176 (185)
                                    ...+++||||.|+|   +++++++|+++|++  +...|....  ....+|++||+||.|||+...
T Consensus       193 --------------~~~~~~Hiaf~v~d~~~v~~~~~~l~~~G~~~~~~~~p~~~~~~~~~~~y~~DP~G~~iEl~~~~  257 (294)
T TIGR02295       193 --------------NGPRLHHIAYWVHDPLNIIKACDILASAGLSDSIERGPGRHGVSNAFFLYLRDPDGHRIELYTGD  257 (294)
T ss_pred             --------------CCCceeeEEEEcCCHHHHHHHHHHHHhCCCCcccccCCccCCCCcceEEEEECCCCCEEEEEecc
Confidence                          01267999999998   55568999999997  544443211  224689999999999998743

The enzyme from Bacillus brevis contains manganese.

>cd08356 Glo_EDI_BRP_like_17 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.64  E-value=6.8e-15  Score=102.40  Aligned_cols=104  Identities=20%  Similarity=0.228  Sum_probs=70.9

Q ss_pred             EEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCCCCC
Q 029933           31 QTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDF  110 (185)
Q Consensus        31 h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~  110 (185)
                      -..|+|+|+++|++||++ |||++..+.    ..  ..++..+                   ...+.+.......     
T Consensus         4 ~~~l~v~Dl~~s~~FY~~-LGf~~~~~~----~~--~~~l~~~-------------------~~~l~l~~~~~~~-----   52 (113)
T cd08356           4 RPFIPAKDFAESKQFYQA-LGFELEWEN----DN--LAYFRLG-------------------NCAFYLQDYYVKD-----   52 (113)
T ss_pred             eeccccccHHHHHHHHHH-hCCeeEecC----CC--EEEEEcC-------------------CEEEEeecCCCcc-----
Confidence            357889999999999987 999998762    12  2333322                   2344442211110     


Q ss_pred             CCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCEEe-----ecCC-CCccceEEEEECCCCcEEEEee
Q 029933          111 KGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFA-----KKPD-GGKLKGVAFIKDPDDYWIEIFD  174 (185)
Q Consensus       111 ~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~-----~~~~-~~~~~~~~~~~DPdG~~iEl~~  174 (185)
                        .       ....+++|.|+|+++++++|+++|+++.     .++. ..++.+.++|+|||||+|+|.+
T Consensus        53 --~-------~~~~~~~~~v~did~~~~~l~~~G~~~~~~~~~~~~~~~~~g~r~f~~~DPdGn~~~~~~  113 (113)
T cd08356          53 --W-------AENSMLHLEVDDLEAYYEHIKALGLPKKFPGVKLPPITQPWWGREFFLHDPSGVLWHIGQ  113 (113)
T ss_pred             --c-------ccCCEEEEEECCHHHHHHHHHHcCCcccccceecCccccCCCcEEEEEECCCccEEEeeC
Confidence              0       0225899999999999999999998753     2222 2344578999999999999864

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07251 Glo_EDI_BRP_like_10 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.64  E-value=1.1e-14  Score=101.53  Aligned_cols=116  Identities=16%  Similarity=0.105  Sum_probs=74.6

Q ss_pred             EEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCCCCCC
Q 029933           32 TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFK  111 (185)
Q Consensus        32 ~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~  111 (185)
                      |.|.|+|++++.+||+++|||++..+.   ...  ..++..+                   ...++++........... 
T Consensus         2 i~l~v~d~~~a~~FY~~~lg~~~~~~~---~~~--~~~~~~~-------------------~~~~~l~~~~~~~~~~~~-   56 (121)
T cd07251           2 ITLGVADLARSRAFYEALLGWKPSADS---NDG--VAFFQLG-------------------GLVLALFPREELAKDAGV-   56 (121)
T ss_pred             eeEeeCCHHHHHHHHHHhcCceecccC---CCc--eEEEEcC-------------------CeEEEEecchhhhhhcCC-
Confidence            689999999999999999999987651   112  2233321                   234555432111100000 


Q ss_pred             CCCCCCCCCCCceEEEEEe---CCHHHHHHHHHhcCCEEeecCCCCc-cceEEEEECCCCcEEEEeec
Q 029933          112 GYHNGNSEPRGFGHIGITV---DDVYKACERFERLGVEFAKKPDGGK-LKGVAFIKDPDDYWIEIFDL  175 (185)
Q Consensus       112 ~~~~~~~~~~g~~hi~~~v---~dv~~~~~~l~~~G~~~~~~~~~~~-~~~~~~~~DPdG~~iEl~~~  175 (185)
                       ...  ....+..|++|.+   +|+++++++++++|+++..++.... +++.+|++||+||+|||..+
T Consensus        57 -~~~--~~~~~~~~~~~~~~~~~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DP~Gn~iei~~~  121 (121)
T cd07251          57 -PVP--PPGFSGITLAHNVRSEEEVDAVLARAAAAGATIVKPPQDVFWGGYSGYFADPDGHLWEVAHN  121 (121)
T ss_pred             -CCC--CCCccceEEEEEcCCHHHHHHHHHHHHhCCCEEecCCccCCCCceEEEEECCCCCEEEEeeC
Confidence             000  0111334566655   5899999999999999987765433 35689999999999999753

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>TIGR03211 catechol_2_3 catechol 2,3 dioxygenase

Probab=99.63  E-value=1e-14  Score=117.94  Aligned_cols=113  Identities=22%  Similarity=0.282  Sum_probs=80.2

Q ss_pred             eeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCC
Q 029933           27 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  106 (185)
Q Consensus        27 ~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~  106 (185)
                      ++++|++|.|+|++++++||+++|||++..+..  .    ..++.....               ..+..+.+...     
T Consensus         3 ~~i~Hi~l~V~Dle~s~~FY~~~LG~~~~~~~~--~----~~~~~~~~~---------------~~~~~~~l~~~-----   56 (303)
T TIGR03211         3 MRLGHVELRVLDLEESLKHYTDVLGLEETGRDG--Q----RVYLKAWDE---------------WDHYSVILTEA-----   56 (303)
T ss_pred             ceeeEEEEEeCCHHHHHHHHHHhcCCEEeeecC--c----eEEEEeccc---------------cccceEeeccC-----
Confidence            379999999999999999999999999876532  1    122221000               00223333211     


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEeC---CHHHHHHHHHhcCCEEeecCC--CCccceEEEEECCCCcEEEEeecCc
Q 029933          107 DPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPD--GGKLKGVAFIKDPDDYWIEIFDLKT  177 (185)
Q Consensus       107 ~~~~~~~~~~~~~~~g~~hi~~~v~---dv~~~~~~l~~~G~~~~~~~~--~~~~~~~~~~~DPdG~~iEl~~~~~  177 (185)
                                  ...++.||+|.|+   ++++++++|+++|+++...+.  ....++.+||+|||||.|||++...
T Consensus        57 ------------~~~g~~hiaf~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~DPdG~~iEl~~~~~  120 (303)
T TIGR03211        57 ------------DTAGLDHMAFKVESEADLERLVKRLEAYGVGTGWIPAGELPGVGRRVRFTLPSGHTMELYAEKE  120 (303)
T ss_pred             ------------CCCceeEEEEEeCCHHHHHHHHHHHHHcCCCeeeccCCCCCCcceEEEEECCCCCEEEEEEccc
Confidence                        0126789999998   799999999999999876554  2233467999999999999998554

Members of this family all are enzymes active as catechol 2,3 dioxygenase (1.13.11.2), although some members have highly significant activity on catechol derivatives such as 3-methylcatechol, 3-chlorocatechol, and 4-chlorocatechol (see Mars, et al.). This enzyme is also called metapyrocatechase, as it performs a meta-cleavage (an extradiol ring cleavage), in contrast to the ortho-cleavage (intradiol ring cleavage)performed by catechol 1,2-dioxygenase (EC 1.13.11.1), also called pyrocatechase.

>TIGR03213 23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase

Probab=99.63  E-value=1.3e-14  Score=116.42  Aligned_cols=115  Identities=20%  Similarity=0.358  Sum_probs=78.1

Q ss_pred             ceeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCC--C-ceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecC
Q 029933           26 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE--M-KFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNW  102 (185)
Q Consensus        26 ~~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~  102 (185)
                      ..+|+|++|.|+|++++++||+++|||++........  + .+..+|+..+..                 +..+.+... 
T Consensus       140 ~~~l~Hv~l~v~Dle~s~~FY~~~LGf~~~~~~~~~~~~g~~~~~~~l~~~~~-----------------~~~~~l~~~-  201 (286)
T TIGR03213       140 DQGLGHIVLRVPDVDAALAFYTEVLGFQLSDVIDLPAGPGVTVRPYFLHCNER-----------------HHSLAFAAG-  201 (286)
T ss_pred             CccccEEEEEcCCHHHHHHHHHHccCCeEEEeEcccCCCCCcceEEEEEECCC-----------------cceEEEecC-
Confidence            3589999999999999999999999999876532211  1 112344433211                 223333211 


Q ss_pred             CCCCCCCCCCCCCCCCCCCCceEEEEEeCCHHH---HHHHHHhcCCEEeecCCCC--ccceEEEEECCCCcEEEEee
Q 029933          103 GTESDPDFKGYHNGNSEPRGFGHIGITVDDVYK---ACERFERLGVEFAKKPDGG--KLKGVAFIKDPDDYWIEIFD  174 (185)
Q Consensus       103 ~~~~~~~~~~~~~~~~~~~g~~hi~~~v~dv~~---~~~~l~~~G~~~~~~~~~~--~~~~~~~~~DPdG~~iEl~~  174 (185)
                       .              ...+++||+|.|+|+++   ++++|+++|+ ....+...  .+...+|++||+||+||+..
T Consensus       202 -~--------------~~~~~~Hiaf~v~d~~~v~~~~~~l~~~G~-~~~~~~r~~~~~~~~~y~~DP~G~~iE~~~  262 (286)
T TIGR03213       202 -P--------------SEKRLNHLMLEVDTLDDVGLALDRVDADGI-VASTLGRHTNDHMVSFYVATPSGWLVEYGW  262 (286)
T ss_pred             -C--------------CCCceEEEEEEcCCHHHHHHHHHHHHHCCC-EEecCCcCCCCCeEEEEEECCCCcEEEeec
Confidence             0              11267899999998776   7999999999 44433222  23457999999999999976

Members of this protein family all have activity as 2,3-dihydroxybiphenyl 1,2-dioxygenase, the third enzyme of a pathway for biphenyl degradation. Many of the extradiol ring-cleaving dioxygenases, to which these proteins belong, act on a range of related substrates. Note that some members of this family may be found operons for toluene or naphthalene degradation, where other activities of the same enzyme may be more significant; the trusted cutoff for this model is set relatively high to exclude most such instances.

>TIGR02295 HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase

Probab=99.60  E-value=3.7e-14  Score=114.07  Aligned_cols=112  Identities=24%  Similarity=0.328  Sum_probs=79.2

Q ss_pred             eeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCC
Q 029933           27 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  106 (185)
Q Consensus        27 ~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~  106 (185)
                      .+++|+.|.|+|++++++||+++|||++..+..    .  ..++......               ....+.+...  .  
T Consensus         3 ~~i~hv~l~v~Dl~~s~~FY~~vLGl~~~~~~~----~--~~~~~~~~~~---------------~~~~l~l~~~--~--   57 (294)
T TIGR02295         3 LRTGHVELRVTDLDKSREFYVDLLGFRETESDK----E--YIYLRGIEEF---------------QHHSLVLTKA--P--   57 (294)
T ss_pred             ceeeEEEEEeCCHHHHHHHHHHccCCEEEEecC----C--eEEEeccCcC---------------CceEEEeeeC--C--
Confidence            379999999999999999999999999876521    1  1222211000               0123333211  0  


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEeC---CHHHHHHHHHhcCCEEeecCCCCccceEEEEECCCCcEEEEeecCc
Q 029933          107 DPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKT  177 (185)
Q Consensus       107 ~~~~~~~~~~~~~~~g~~hi~~~v~---dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~~  177 (185)
                                   ..++.|++|.|+   |+++++++|+++|+++...+..+ ..+.+||+|||||.|||++...
T Consensus        58 -------------~~~~~hiaf~v~~~~dl~~~~~~l~~~Gv~v~~~~~~~-~~~~~~~~DPdG~~iEl~~~~~  117 (294)
T TIGR02295        58 -------------SAALSYIGFRVSKEEDLDKAADFFQKLGHPVRLVRDGG-QPEALRVEDPFGYPIEFYFEME  117 (294)
T ss_pred             -------------CcCccEEEEEeCCHHHHHHHHHHHHhcCCcEEeecCCC-CceEEEEECCCCCEEEEEEchh
Confidence                         015689999997   78999999999999987755332 3467999999999999998543

The enzyme from Bacillus brevis contains manganese.

>TIGR03213 23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase

Probab=99.57  E-value=6.4e-14  Score=112.50  Aligned_cols=110  Identities=18%  Similarity=0.235  Sum_probs=78.2

Q ss_pred             eEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCC
Q 029933           28 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESD  107 (185)
Q Consensus        28 ~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~  107 (185)
                      ++.|+.|.|+|+++|++||+++|||++..+..  ..   ..|+..+..                 +..+.+...  ..  
T Consensus         3 ~i~~v~l~V~Dl~~s~~FY~~~LGl~~~~~~~--~~---~~~~~~~~~-----------------~~~~~l~~~--~~--   56 (286)
T TIGR03213         3 GLGYLGIGVSDVDAWREFATEVLGMMVASEGE--ND---ALYLRLDSR-----------------AHRIAVHPG--ES--   56 (286)
T ss_pred             eeeEEEEEeCCHHHHHHHHHhccCcccccCCC--Cc---eEEEEcCCC-----------------ceEEEEEEC--Cc--
Confidence            78999999999999999999999998765421  11   123332210                 233434211  10  


Q ss_pred             CCCCCCCCCCCCCCCceEEEEEeCC---HHHHHHHHHhcCCEEeecCC----CCccceEEEEECCCCcEEEEeecC
Q 029933          108 PDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPD----GGKLKGVAFIKDPDDYWIEIFDLK  176 (185)
Q Consensus       108 ~~~~~~~~~~~~~~g~~hi~~~v~d---v~~~~~~l~~~G~~~~~~~~----~~~~~~~~~~~DPdG~~iEl~~~~  176 (185)
                                   .++.|++|.|++   +++++++|+++|+++...+.    ....+..+||+|||||.|||+...
T Consensus        57 -------------~~~~~~~f~V~~~~~l~~~~~~L~~~Gv~~~~~~~~~~~~~~~~~~~~f~DPdGn~lEl~~~~  119 (286)
T TIGR03213        57 -------------DDLAYAGWEVADEAGLDQVKEKLEKAGVAVTVASAAEARERGVLGLIKFTDPGGNPLEIYYGA  119 (286)
T ss_pred             -------------CCeeeEeeeeCCHHHHHHHHHHHHHcCCceEECCHHHhhhccceEEEEEECCCCCEEEEEEcc
Confidence                         145799999998   88999999999999876542    223345799999999999999743

Members of this protein family all have activity as 2,3-dihydroxybiphenyl 1,2-dioxygenase, the third enzyme of a pathway for biphenyl degradation. Many of the extradiol ring-cleaving dioxygenases, to which these proteins belong, act on a range of related substrates. Note that some members of this family may be found operons for toluene or naphthalene degradation, where other activities of the same enzyme may be more significant; the trusted cutoff for this model is set relatively high to exclude most such instances.

>KOG2943 consensus Predicted glyoxalase [Carbohydrate transport and metabolism]

Probab=99.56  E-value=2.7e-14  Score=108.76  Aligned_cols=129  Identities=35%  Similarity=0.569  Sum_probs=103.7

Q ss_pred             CCCCCCCCceeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCC-----------CceEEEeeccCCCCCCCCCCccce
Q 029933           18 TARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE-----------MKFSLYFLGYEDTASAPADPVDRT   86 (185)
Q Consensus        18 ~~~~~~~~~~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~   86 (185)
                      .+++..+.  ++.|+.+.|-|.++++.||+++|||++.++.++++           ++|.-.|++++..-          
T Consensus         9 ~~~~~~~~--r~LH~VfkVgdr~kti~Fyt~vlgMkvLRheef~egc~aacngpyd~kwSktmvGyGpEd----------   76 (299)
T KOG2943|consen    9 CWMKADTR--RALHYVFKVGDRAKTIDFYTEVLGMKVLRHEEFEEGCEAACNGPYDGKWSKTMVGYGPED----------   76 (299)
T ss_pred             hhhhccch--heeeEeEeecchHHHHHHHHHhhcceeeehhhhhhhhhhhcCCCcccchhhhheecCCCc----------
Confidence            44544443  89999999999999999999999999999877766           78888888886532          


Q ss_pred             eeecCCCcEEEEeecCCCCCCCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCEEeecCCCCccceEEEEECCC
Q 029933           87 VWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPD  166 (185)
Q Consensus        87 ~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPd  166 (185)
                           .+..+||.++++...      |..|+    ++.||.+.++|+-...+.+...|.+       +.....+++.|||
T Consensus        77 -----shFViELTYNYgV~~------YelGn----dfg~i~I~s~dv~~~ve~v~~p~~~-------~~g~~~~~v~dPd  134 (299)
T KOG2943|consen   77 -----SHFVIELTYNYGVSK------YELGN----DFGGITIASDDVFSKVEKVNAPGGK-------GSGCGIAFVKDPD  134 (299)
T ss_pred             -----ccEEEEEEeccCccc------eeccC----CcccEEEeHHHHHHHHHHhcCcCCc-------ccceEEEEEECCC
Confidence                 278999999988865      88887    8999999999988888877766652       2222368899999


Q ss_pred             CcEEEEeecCcccc
Q 029933          167 DYWIEIFDLKTIGK  180 (185)
Q Consensus       167 G~~iEl~~~~~~~~  180 (185)
                      |+.++|+++.+-.+
T Consensus       135 GykF~l~~~~p~s~  148 (299)
T KOG2943|consen  135 GYKFYLIDRGPQSD  148 (299)
T ss_pred             CcEEEEeccCCCCC
Confidence            99999998666443

>COG3565 Predicted dioxygenase of extradiol dioxygenase family [General function prediction only]

Probab=99.54  E-value=1.5e-13  Score=93.45  Aligned_cols=129  Identities=19%  Similarity=0.255  Sum_probs=85.3

Q ss_pred             eEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCC
Q 029933           28 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESD  107 (185)
Q Consensus        28 ~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~  107 (185)
                      .+-|++|.|.|++++++||.++||++..++.   +......+.++                    +..+++........+
T Consensus         4 ~~FHLA~pV~Dl~~tr~FYgevlG~~~GRst---d~wvdfDfyGH--------------------Q~v~Hl~~q~~~~~~   60 (138)
T COG3565           4 VPFHLAIPVNDLDETRRFYGEVLGCKEGRST---DTWVDFDFYGH--------------------QVVAHLTPQPDSQGS   60 (138)
T ss_pred             cceEEeeeccccHHHHhhhhhhccccccccc---ceEEEeeeccc--------------------EEEEEecCCcccccC
Confidence            5679999999999999999999999988763   22223334443                    334444322222111


Q ss_pred             CCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCEEeecCCC---Cc--cceEEEEECCCCcEEEEeecCcccccc
Q 029933          108 PDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDG---GK--LKGVAFIKDPDDYWIEIFDLKTIGKIG  182 (185)
Q Consensus       108 ~~~~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~~~---~~--~~~~~~~~DPdG~~iEl~~~~~~~~~~  182 (185)
                      .   ++..-...+.. .-+.|.++|..++.++|+++|+.+..+|.-   +.  -.+.+|+.||.||.+|+-..++...+|
T Consensus        61 g---~V~~~~v~~pH-fGvVl~~edW~alaerlea~gi~~~i~P~vRF~Ge~gEq~TlFl~DP~gN~lEfK~fR~~e~vF  136 (138)
T COG3565          61 G---KVDGHGVPPPH-FGVVLPVEDWFALAERLEAAGIPFHIPPKVRFKGEPGEQRTLFLFDPSGNALEFKGFRDQEQVF  136 (138)
T ss_pred             c---ccCCCCCCCcc-ceEEEEHHHHHHHHHHHHHcCCCcccCceEEecCCccceEEEEEECCCCCeeeeecccchhhhh
Confidence            1   11111111112 234567789999999999999999877732   21  135789999999999998888877766


Q ss_pred             C
Q 029933          183 G  183 (185)
Q Consensus       183 ~  183 (185)
                      +
T Consensus       137 a  137 (138)
T COG3565         137 A  137 (138)
T ss_pred             c
Confidence            4

>PF13669 Glyoxalase_4: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; PDB: 3RMU_B 3ISQ_A 1JC5_D 1JC4_D 3HDP_A 2QH0_A 3GM5_A 3OA4_A 3CT8_A

Probab=99.53  E-value=5e-14  Score=97.44  Aligned_cols=97  Identities=26%  Similarity=0.343  Sum_probs=72.7

Q ss_pred             EEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCCCC
Q 029933           30 QQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPD  109 (185)
Q Consensus        30 ~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~  109 (185)
                      +|++|.|+|++++++||+++||++.......+.......++..++.                 ...+||+.+.....   
T Consensus         1 dHv~i~V~Dl~~a~~~~~~~lG~~~~~~~~~~~~~v~~~~~~~~~~-----------------~~~iELi~p~~~~~---   60 (109)
T PF13669_consen    1 DHVGIVVPDLDAAAAFYCDVLGFEPWERYRDEPQGVRVAFLYLGDG-----------------PVQIELIQPLDGDS---   60 (109)
T ss_dssp             EEEEEEES-HHHHHHHHHHCTTHEEEEEEEEGCTTEEEEEEEETTE-----------------TEEEEEEEESSTTC---
T ss_pred             CEEEEEcCCHHHHHHHHHHhhCCcEEEEEecCCCCEEEEEEEeCCC-----------------cEEEEEEEeCCCCc---
Confidence            6999999999999999999999987766554455555555554331                 25899988755431   


Q ss_pred             CCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCEEeecC
Q 029933          110 FKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP  151 (185)
Q Consensus       110 ~~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~  151 (185)
                        ++.   ....|++||||.|+|+++..++|+++|+++..++
T Consensus        61 --~~~---~~~~gi~Hia~~v~D~d~~~~~l~~~G~~~~~~~   97 (109)
T PF13669_consen   61 --PLD---RGGGGIHHIAFEVDDLDAAIARLEAQGFRVLDEG   97 (109)
T ss_dssp             --HHH---HTSSEEEEEEEEESHHHHHHHHHHHTTECEEECE
T ss_pred             --ccc---cCCCCEEEEEEEeCCHHHHHHHHHHCCCEEcccC
Confidence              011   0234899999999999999999999999988764

>COG2514 Predicted ring-cleavage extradiol dioxygenase [General function prediction only]

Probab=99.52  E-value=4.3e-13  Score=104.34  Aligned_cols=122  Identities=16%  Similarity=0.303  Sum_probs=88.9

Q ss_pred             CCCCceeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeec
Q 029933           22 EATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHN  101 (185)
Q Consensus        22 ~~~~~~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~  101 (185)
                      +.++.+.+..+.|.|+|++++..||+++||+++..+..      ..+.++.++                  ...+.|...
T Consensus         4 ~~~~~~~v~~v~L~vrdL~~~~~FY~~ilGL~v~~~~~------~~v~L~vgg------------------~~LL~L~q~   59 (265)
T COG2514           4 ALTTPTFVGAVTLNVRDLDSMTSFYQEILGLQVLEETD------GSVTLGVGG------------------TPLLTLEQF   59 (265)
T ss_pred             ccCCCcEEEEEEEEeccHHHHHHHHHHhhCCeeeeccC------ceEEEeeCC------------------EEEEEEEeC
Confidence            34556689999999999999999999999999998743      223344332                  235666554


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCceEEEEEeCC---HHHHHHHHHhcCCEEeecCCCCccceEEEEECCCCcEEEEeecCc
Q 029933          102 WGTESDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKT  177 (185)
Q Consensus       102 ~~~~~~~~~~~~~~~~~~~~g~~hi~~~v~d---v~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~~  177 (185)
                      ......     .    ....|+-|++|.+++   +..++.++.+.|+.+.+. -++...-.+||.||+||-|||+..++
T Consensus        60 ~~a~~~-----~----~~~aGLyH~AfLlP~r~~L~~~l~hl~~~~~~l~Ga-~DH~vSEAlYl~DPEGNGIEiYaDrp  128 (265)
T COG2514          60 PDARRP-----P----PRAAGLYHTAFLLPTREDLARVLNHLAEEGIPLVGA-SDHLVSEALYLEDPEGNGIEIYADRP  128 (265)
T ss_pred             CCCCCC-----C----ccccceeeeeeecCCHHHHHHHHHHHHhcCCccccc-CcchhheeeeecCCCCCeEEEEecCC
Confidence            333211     1    112377899999995   777788899999998743 34555568999999999999998765

>COG3324 Predicted enzyme related to lactoylglutathione lyase [General function prediction only]

Probab=99.51  E-value=1.2e-12  Score=92.13  Aligned_cols=117  Identities=17%  Similarity=0.179  Sum_probs=82.0

Q ss_pred             eEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCC
Q 029933           28 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESD  107 (185)
Q Consensus        28 ~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~  107 (185)
                      .+.|..|.|+|++++++||+++|||.........+..  .+.+..+... .              ...+.-    ...  
T Consensus         9 ~i~w~Ei~~~D~~ra~~FY~~vFgW~~~~~~~~~~~~--y~~f~~~~~~-~--------------gG~l~~----~~~--   65 (127)
T COG3324           9 TIVWFELPVSDLERAKAFYEKVFGWTFEDYFDMGEMR--YAVFPADGAG-A--------------GGGLMA----RPG--   65 (127)
T ss_pred             ccEEEeeecCCHHHHHHHHHHhhCceecccccCCCce--EEEEECCCcc-c--------------cceecc----CCc--
Confidence            6889999999999999999999999888764322222  3333221100 0              011111    000  


Q ss_pred             CCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCEEeecCCCCc-cceEEEEECCCCcEEEEeecC
Q 029933          108 PDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGK-LKGVAFIKDPDDYWIEIFDLK  176 (185)
Q Consensus       108 ~~~~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~~~~~-~~~~~~~~DPdG~~iEl~~~~  176 (185)
                           ..   +. ....+|.|.|+|+++..++..++|.+++.++..-+ .++.+.+.||+||.|-|++..
T Consensus        66 -----~~---p~-~~~~~iy~~v~did~~l~rv~~~GG~V~~p~~~~p~~G~~a~~~Dp~Gn~~~l~s~~  126 (127)
T COG3324          66 -----SP---PG-GGGWVIYFAVDDIDATLERVVAAGGKVLRPKTEFPGGGRIAHFVDPEGNRFGLWSPA  126 (127)
T ss_pred             -----CC---CC-CCCEEEEEecCChHHHHHHHHhcCCeEEecccccCCceEEEEEECCCCCEEEEeecC
Confidence                 11   01 24468889999999999999999999999887655 667899999999999998753

>cd07250 HPPD_C_like C-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HppD) and hydroxymandelate Synthase (HmaS)

Probab=99.42  E-value=2.5e-12  Score=97.67  Aligned_cols=106  Identities=20%  Similarity=0.336  Sum_probs=71.1

Q ss_pred             eEEEEEEEeC--ChHHHHHHHHHhcCCEEeeeeecCC--CceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCC
Q 029933           28 FMQQTMFRIK--DPKVSLDFYSRVLGMSLLKRLDFPE--MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWG  103 (185)
Q Consensus        28 ~i~h~~l~v~--D~e~s~~FY~~~LG~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~  103 (185)
                      +++|+++.|+  |++++++||+++|||+.......++  .......+..+.                 +...++|.....
T Consensus         3 ~iDHv~i~V~~~dl~~a~~fY~~~LGf~~~~~~~~~~~~~~~~s~~l~~~~-----------------g~i~l~L~~~~~   65 (191)
T cd07250           3 RIDHVVGNVPDGEMDSWVDFYRKVLGFHRFWSFDIEDPYSGLRSRVLASPD-----------------GKIRIPLNEPAS   65 (191)
T ss_pred             eeeEEEeecChhHHHHHHHHHHHhhCCceeeEEccCcCcccEEEEEEECCC-----------------CcEEEEEecCCC
Confidence            7899999999  9999999999999999887654322  233333444321                 145667765432


Q ss_pred             CCCCCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCEEeecC
Q 029933          104 TESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP  151 (185)
Q Consensus       104 ~~~~~~~~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~  151 (185)
                      .........+. ......|++||||.|+|+++++++|+++|+++...|
T Consensus        66 ~~~~s~~~~fl-~~~~G~Gv~HIAf~vdDI~~~~~~L~~~Gv~~l~~P  112 (191)
T cd07250          66 GKRKSQIQEFL-EYYGGAGVQHIALATDDIFATVAALRARGVEFLPIP  112 (191)
T ss_pred             CCCccHHHHHH-HHhCCCceeEEEEECCCHHHHHHHHHHcCCeeccCc
Confidence            11110000000 001124889999999999999999999999998776

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of 4-hydroxyphenylpyruvate to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two,

>COG0346 GloA Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]

Probab=99.30  E-value=2.3e-11  Score=84.62  Aligned_cols=130  Identities=24%  Similarity=0.336  Sum_probs=73.4

Q ss_pred             eEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCc---eEEEeeccCCCCCCCCCCccceeeecCCC-cEEEEeecCC
Q 029933           28 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMK---FSLYFLGYEDTASAPADPVDRTVWTFGKP-ATIELTHNWG  103 (185)
Q Consensus        28 ~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~l~~~~~  103 (185)
                      +++|++|.|+|+++|++||+++||+++..........   ....+.......        ...+...+. ...+......
T Consensus         2 ~l~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~   73 (138)
T COG0346           2 GIHHVTLAVPDLEASIDFYTDVLGLRLVKDTVNEADDGGGYHLLFLDGDGGP--------GELLAFFGFEGRAGTGFVGD   73 (138)
T ss_pred             ceEEEEEeeCCHhHhHHHHHhhcCCeeeeecccccCCceEEEEEeccCCCCc--------ccceeecccccccccccccc
Confidence            6899999999999999999999999999875422211   112222211000        000000000 0000000000


Q ss_pred             CCCCCCCCCCCCCCCCCCCceEEEEEeCC---HHHHHHHHHhcCCEEeecCCCCccceEEEEECCCCcEEEEee
Q 029933          104 TESDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFD  174 (185)
Q Consensus       104 ~~~~~~~~~~~~~~~~~~g~~hi~~~v~d---v~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~  174 (185)
                      .    .. ....+   ..+..|+++.+++   +......+...|..+..... ...+..+|++||||+.||+++
T Consensus        74 ~----~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~~~dp~g~~~e~~~  138 (138)
T COG0346          74 V----AL-GVPGG---DLGLGHLAFEVDDEAFGDAALAFLDPDGVRIELGEP-GRGGVHVYFRDPDGILIELAT  138 (138)
T ss_pred             e----EE-eecCc---hhccCceeEecccccccceEEEeeCCCCCEEEeecC-CCcceEEEEECCCCcEEEeeC
Confidence            0    00 00000   0246799999998   66666667777888765443 333347999999999999974

>COG3607 Predicted lactoylglutathione lyase [General function prediction only]

Probab=99.29  E-value=5.2e-11  Score=82.28  Aligned_cols=122  Identities=16%  Similarity=0.157  Sum_probs=76.9

Q ss_pred             eEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCC
Q 029933           28 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESD  107 (185)
Q Consensus        28 ~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~  107 (185)
                      ++.-++|+|+|+++|++||.. |||+.........   ...+.-.+                   ...+.|.....=.  
T Consensus         3 ~mIFvNLPVkDL~~S~~Fy~a-lGfk~Npq~sde~---a~~mi~~~-------------------ni~vMLL~~~~fq--   57 (133)
T COG3607           3 QMIFVNLPVKDLEASKAFYTA-LGFKFNPQFSDED---AACMIISD-------------------NIFVMLLEEARFQ--   57 (133)
T ss_pred             eEEEEecchhhHHHHHHHHHH-hCcccCCCccccc---ceeEEEec-------------------cEEEEEeccHHhh--
Confidence            566899999999999999976 9998887643222   12222221                   1222222110000  


Q ss_pred             CCCCCCCCCCCCCCCceEEEEEeC---CHHHHHHHHHhcCCEEeecCCCCccceEEEEECCCCcEEEEeec
Q 029933          108 PDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDL  175 (185)
Q Consensus       108 ~~~~~~~~~~~~~~g~~hi~~~v~---dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~  175 (185)
                       .+..-.........-..|||.++   +++++.++..+.|.+...++.+....+..-|.|||||.||++--
T Consensus        58 -~F~~~~i~dt~~s~evli~ls~~s~eevd~~v~ka~eaGGk~~~~~~d~gfMYg~~fqDpDGh~wE~l~m  127 (133)
T COG3607          58 -TFTKRQIADTTKSREVLISLSAGSREEVDELVDKALEAGGKPANEPQDEGFMYGRSFQDPDGHVWEFLWM  127 (133)
T ss_pred             -hhcccccccccCCceEEEEeccCcHHHHHHHHHHHHHcCCCCCCCccccccccceeeeCCCCCeEEEEEe
Confidence             00000001111123357888887   49999999999999998888776555556679999999999754

>TIGR01263 4HPPD 4-hydroxyphenylpyruvate dioxygenase

Probab=99.21  E-value=2.8e-10  Score=94.18  Aligned_cols=104  Identities=18%  Similarity=0.376  Sum_probs=69.2

Q ss_pred             eeEEEEEEEeC--ChHHHHHHHHHhcCCEEeeeeecCC--CceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecC
Q 029933           27 YFMQQTMFRIK--DPKVSLDFYSRVLGMSLLKRLDFPE--MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNW  102 (185)
Q Consensus        27 ~~i~h~~l~v~--D~e~s~~FY~~~LG~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~  102 (185)
                      .+++|++|.|.  |+++++.||+++|||++..+.....  ..+....+..+                 .+...++|..+.
T Consensus       157 ~~iDHv~i~V~~~dl~~~~~fY~~~lGf~~~~~~~~~~~~~~~~s~~~~~~-----------------~g~~~i~L~ep~  219 (353)
T TIGR01263       157 IAIDHLVGNVYRGQMEPWAEFYEKIFGFREIRSFDIKTEYSALNSIVMASP-----------------DGKVKIPLNEPA  219 (353)
T ss_pred             EEeeeeEcccCCccHHHHHHHHHHHhCCceeeEEEeccCCccEEEEEEECC-----------------CCcEEEEEeccC
Confidence            36999999999  9999999999999999887644221  11111112211                 124567776432


Q ss_pred             CCCCCCC---CCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCEEeecC
Q 029933          103 GTESDPD---FKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP  151 (185)
Q Consensus       103 ~~~~~~~---~~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~  151 (185)
                      .......   +.....|    .|++||||.|+|+++++++|+++|+++...|
T Consensus       220 ~~~~~s~i~~fl~~~~g----~Gv~HiAf~vdDi~~~~~~l~~~Gv~~l~~P  267 (353)
T TIGR01263       220 SGKDKSQIEEFLEFYNG----AGVQHIALNTDDIVRTVRALRARGVEFLDTP  267 (353)
T ss_pred             CCCCCCHHHHHHHHcCC----CCccEEEEEcCCHHHHHHHHHHcCCccCcCC
Confidence            2111111   1011122    3889999999999999999999999999766

This protein oxidizes 4-hydroxyphenylpyruvate, a tyrosine and phenylalanine catabolite, to homogentisate. Homogentisate can undergo a further non-enzymatic oxidation and polymerization into brown pigments that protect some bacterial species from light. A similar process occurs spontaneously in blood and is hemolytic (see PubMed:8000039). In some bacterial species, this enzyme has been studied as a hemolysin.

>KOG2943 consensus Predicted glyoxalase [Carbohydrate transport and metabolism]

Probab=99.21  E-value=7.6e-11  Score=90.09  Aligned_cols=121  Identities=27%  Similarity=0.437  Sum_probs=89.2

Q ss_pred             eEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCC
Q 029933           28 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESD  107 (185)
Q Consensus        28 ~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~  107 (185)
                      .+.++.|.|.|+++|++||+++||+++.+..    ......++++++.                 +..+||....+... 
T Consensus       149 pv~~V~l~VgdL~ks~kyw~~~lgM~ileke----ek~t~~~mgYgd~-----------------q~~LElt~~~~~id-  206 (299)
T KOG2943|consen  149 PVLQVMLNVGDLQKSIKYWEKLLGMKILEKE----EKYTRARMGYGDE-----------------QCVLELTYNYDVID-  206 (299)
T ss_pred             CeEEEEEEehhHHHHHHHHHHHhCcchhhhh----hhhhhhhhccCCc-----------------ceEEEEEeccCccc-
Confidence            4679999999999999999999999999862    2346677888764                 78999988766532 


Q ss_pred             CCCCCCCCCCCCCCCceEEEEEe--CCHHHHHHHHHhcCCEEeecC----CCCccc-eEEEEECCCCcEEEEeecCcccc
Q 029933          108 PDFKGYHNGNSEPRGFGHIGITV--DDVYKACERFERLGVEFAKKP----DGGKLK-GVAFIKDPDDYWIEIFDLKTIGK  180 (185)
Q Consensus       108 ~~~~~~~~~~~~~~g~~hi~~~v--~dv~~~~~~l~~~G~~~~~~~----~~~~~~-~~~~~~DPdG~~iEl~~~~~~~~  180 (185)
                           +.      .++..|+|.+  +++..+.+.++..+..+..+.    .++.-. ..+.+.||||+.|.++....+++
T Consensus       207 -----~~------kg~griafaip~d~~~~l~e~iK~~n~~i~~~lttl~tPgka~vqvvil~DPDgheicfVdde~F~~  275 (299)
T KOG2943|consen  207 -----RA------KGFGRIAFAIPTDDLPKLQEAIKSANGTILTPLTTLDTPGKATVQVVILADPDGHEICFVDDEGFRK  275 (299)
T ss_pred             -----cc------ccceeEEEeccccccccHHHHHHHhccccccceeeccCCCcceeEEEEEECCCCceEEEeccHHHHH
Confidence                 21      2556666666  477788888888866665443    233222 36778999999999999887776


Q ss_pred             c
Q 029933          181 I  181 (185)
Q Consensus       181 ~  181 (185)
                      +
T Consensus       276 l  276 (299)
T KOG2943|consen  276 L  276 (299)
T ss_pred             H
Confidence            4

>cd06588 PhnB_like Escherichia coli PhnB and similar proteins; the E

Probab=99.16  E-value=2.8e-09  Score=75.59  Aligned_cols=111  Identities=12%  Similarity=0.042  Sum_probs=69.7

Q ss_pred             EEEEe-CChHHHHHHHHHhcCCEEeeeeecCC----------CceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEee
Q 029933           32 TMFRI-KDPKVSLDFYSRVLGMSLLKRLDFPE----------MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTH  100 (185)
Q Consensus        32 ~~l~v-~D~e~s~~FY~~~LG~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~  100 (185)
                      ..|.+ .|.+++++||+++||+++........          ..+....+..                   ++..+.+..
T Consensus         3 p~L~~~~~~~eAi~FY~~~fg~~~~~~~~~~~~~~~~~~~~~~~i~ha~l~i-------------------~g~~l~~~d   63 (128)
T cd06588           3 PYLWFNGNAEEALEFYQSVFGGEITSLTRYGEGPPPDPEEPEGKVMHAELTI-------------------GGQRLMASD   63 (128)
T ss_pred             eEEeeCCCHHHHHHHHHHHhCCEeEEEEEcCCCCCCCCCCcCCcEEEEEEEE-------------------CCEEEEEEc
Confidence            45667 89999999999999999987654221          1111222222                   123444432


Q ss_pred             cCCCCCCCCCCCCCCCCCCCCCceEEEEEeCC---HHHHHHHHHhcCCEEeecCCCCc-cceEEEEECCCCcEEEEe
Q 029933          101 NWGTESDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGK-LKGVAFIKDPDDYWIEIF  173 (185)
Q Consensus       101 ~~~~~~~~~~~~~~~~~~~~~g~~hi~~~v~d---v~~~~~~l~~~G~~~~~~~~~~~-~~~~~~~~DPdG~~iEl~  173 (185)
                      .... .  .   .     ......++++.|+|   +++++++|++.| ++..++.... +.+.++++||+|+.|+|.
T Consensus        64 ~~~~-~--~---~-----~~~~~~~l~i~~~~~e~v~~~~~~l~~~g-~~~~~~~~~~~g~~~~~v~Dp~G~~W~i~  128 (128)
T cd06588          64 GGPG-F--P---F-----TFGNGISLSVECDSEEEADRLFEALSEGG-TVLMPLQKTFWSPLFGWVTDRFGVSWQIN  128 (128)
T ss_pred             CCCC-C--C---C-----CCCCCEEEEEECCCHHHHHHHHHHHhcCC-eEeccchhcCcccccEEEECCCCCEEEeC
Confidence            2111 0  0   0     01133589999986   778889987766 7777765533 345788999999999973

coli phnB gene is found next to an operon involved in the cleavage of carbon-phosphorus bonds in unactivated alkylphosphonates. The Escherichia coli phnB gene is found next to an operon of fourteen genes (phnC-to-phnP) related to the cleavage of carbon-phosphorus (C-P) bonds in unactivated alkylphosphonates, supporting bacterial growth on alkylphosphonates as the sole phosphorus source. It was originally considered part of that operon. PhnB appears to play no direct catalytic role in the usage of alkylphosphonate. Although many of the proteins in this family have been annotated as 3-demethylubiquinone-9 3-methyltransferase enzymes by automatic annotation programs, the experimental evidence for this assignment is lacking. In Escherichia coli, the gene coding 3-demethylubiquinone-9 3-methyltransferase enzyme is ubiG, which belongs to the AdoMet-MTase protein family. PhnB-like proteins adopt a structural fold similar to

>TIGR01263 4HPPD 4-hydroxyphenylpyruvate dioxygenase

Probab=99.14  E-value=1.6e-09  Score=89.64  Aligned_cols=124  Identities=19%  Similarity=0.153  Sum_probs=77.0

Q ss_pred             eEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCC
Q 029933           28 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESD  107 (185)
Q Consensus        28 ~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~  107 (185)
                      .++|+.|.|+|++++++||++.|||++........... ...+..                   +...++|........ 
T Consensus         2 ~i~hi~~~V~D~~~a~~~y~~~LGf~~~~~~~~~~~~~-~~~~~~-------------------G~~~l~L~~~~~~~s-   60 (353)
T TIGR01263         2 GFDFVEFYVGDAKQAAYYYFTRFGFEKVAKETGHREKA-SHVLRQ-------------------GQINFVLTAPYSSDS-   60 (353)
T ss_pred             ceEEEEEEeCCHHHHHHHHHHhcCCcEEEEeecCCcee-EEEEEe-------------------CCEEEEEecCCCCCc-
Confidence            68999999999999999999999999887622112111 122221                   145677754432211 


Q ss_pred             CCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCEEeecCCCC--ccceEEEEECCCCcEEEEeec
Q 029933          108 PDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGG--KLKGVAFIKDPDDYWIEIFDL  175 (185)
Q Consensus       108 ~~~~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~~~~--~~~~~~~~~DPdG~~iEl~~~  175 (185)
                       ....+.  ...+.+..||||.|+|++++++++.++|+++..+|...  ..-...-+.-++|..+=++++
T Consensus        61 -~~~~~~--~~hg~gv~~iaf~V~Dv~~a~~~l~~~Ga~~v~~p~~~~~g~~~~~~i~~~g~~~~~~i~~  127 (353)
T TIGR01263        61 -PAADFA--AKHGDGVKDVAFRVDDAAAAFEAAVERGAEPVQAPVELDEGAVTLATIKGIGDVVHTLVDR  127 (353)
T ss_pred             -hHHHHH--HhCCCceEEEEEEECCHHHHHHHHHHCCCEeccCCccCCCCeEEEEEEECcCCCEEEEEcC
Confidence             000010  01123788999999999999999999999998876542  111122234455555555543

This protein oxidizes 4-hydroxyphenylpyruvate, a tyrosine and phenylalanine catabolite, to homogentisate. Homogentisate can undergo a further non-enzymatic oxidation and polymerization into brown pigments that protect some bacterial species from light. A similar process occurs spontaneously in blood and is hemolytic (see PubMed:8000039). In some bacterial species, this enzyme has been studied as a hemolysin.

>PLN02875 4-hydroxyphenylpyruvate dioxygenase

Probab=99.01  E-value=1.1e-09  Score=91.35  Aligned_cols=106  Identities=12%  Similarity=0.269  Sum_probs=71.4

Q ss_pred             eEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCC-----ceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecC
Q 029933           28 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEM-----KFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNW  102 (185)
Q Consensus        28 ~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~  102 (185)
                      +|+|+++.|.+++++..||+++|||+........+.     ++....+..++                 +...++|..+.
T Consensus       180 ~IDHi~iaV~~ld~a~~fY~~vlGf~~~~~~d~~~i~~~~sgl~S~vl~sp~-----------------g~v~ipLnEP~  242 (398)
T PLN02875        180 RLDHAVGNVPNLLPAVNYIAGFTGFHEFAEFTAEDVGTVDSGLNSMVLASNN-----------------EMVLLPLNEPT  242 (398)
T ss_pred             eeCcceechhhHHHHHHHHHHhcCCeeeeeeccccccccccceEEEEEEcCC-----------------CcEEEEeccCC
Confidence            799999999999999999999999988865432221     12333333322                 24577776653


Q ss_pred             CC-CCCCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhc----CCEEeecC
Q 029933          103 GT-ESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERL----GVEFAKKP  151 (185)
Q Consensus       103 ~~-~~~~~~~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~----G~~~~~~~  151 (185)
                      .. ..+.....+-.. .+..|++||||.|+||.++.++|+++    |++++..|
T Consensus       243 ~~~~~~SqI~eFL~~-~~G~GIQHIAl~tdDI~~av~~Lra~~~~~Gv~fL~~P  295 (398)
T PLN02875        243 FGTKRKSQIQTYLEH-NEGPGLQHLALKSDDIFGTLREMRARSHIGGFEFMPPP  295 (398)
T ss_pred             CCCCCcChHHHHHHh-cCCCCeeEEEeecCCHHHHHHHHHhccccCCeecCCCC
Confidence            21 111111111111 12249999999999999999999999    99999854

>PRK01037 trmD tRNA (guanine-N(1)-)-methyltransferase/unknown domain fusion protein; Reviewed

Probab=98.99  E-value=4.8e-09  Score=85.10  Aligned_cols=105  Identities=17%  Similarity=0.274  Sum_probs=70.8

Q ss_pred             eEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCC
Q 029933           28 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESD  107 (185)
Q Consensus        28 ~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~  107 (185)
                      ++.||+|+|+|+++|++||+++|++.. +.    +... ..+   ++                   ..+.+.....   +
T Consensus       247 ~~IfVNLpV~DL~rS~~FYt~LF~~n~-Fs----de~a-~cm---~d-------------------tI~vMllt~~---D  295 (357)
T PRK01037        247 KTFSVVLEVQDLRRAKKFYSKMFGLEC-WD----GDKL-FLL---GK-------------------TSLYLQQTKA---E  295 (357)
T ss_pred             ceEEEEeeeCCHHHHHHHHHHHhCCCC-CC----CCcc-ccc---cC-------------------cEEEEEecCC---C
Confidence            677999999999999999999999875 33    2111 111   11                   1222211111   1


Q ss_pred             CCCCCCCCCCCCCCCceEEEEEeCC---HHHHHHHHHhcCCEEeecCCCCccceEEEEECCCCcEEEEeec
Q 029933          108 PDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDL  175 (185)
Q Consensus       108 ~~~~~~~~~~~~~~g~~hi~~~v~d---v~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~  175 (185)
                      ..          ...-..+|+.+++   +|+++++..++|.....++.+...+  --|.|||||.||++-.
T Consensus       296 ~~----------~~~evLl~Ls~~Sre~VD~lv~~A~aaGG~~~~~~~D~Gf~--rsf~D~DGH~WEi~~~  354 (357)
T PRK01037        296 KK----------NRGTTTLSLELECEHDFVRFLRRWEMLGGELGEQADGHFPL--RLVFDLDGHIWVVSCV  354 (357)
T ss_pred             CC----------CcceEEEEeccCCHHHHHHHHHHHHHcCCCCCCCcccccCc--ceeECCCCCEEEEEEE
Confidence            10          0133578999984   8999999999999776777665542  3569999999999854

>COG2764 PhnB Uncharacterized protein conserved in bacteria [Function unknown]

Probab=98.97  E-value=6.3e-08  Score=69.24  Aligned_cols=118  Identities=19%  Similarity=0.178  Sum_probs=80.1

Q ss_pred             EEEEeC-ChHHHHHHHHHhcCCEEeeeeecCC----------CceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEee
Q 029933           32 TMFRIK-DPKVSLDFYSRVLGMSLLKRLDFPE----------MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTH  100 (185)
Q Consensus        32 ~~l~v~-D~e~s~~FY~~~LG~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~  100 (185)
                      .-|.++ |-+++++||+++||.+........+          ......-+..+                   ...|.+..
T Consensus         4 PYl~f~gn~~~Al~fY~~vFgae~~~~~~~~d~~~~~~~~~~~~i~HA~l~i~-------------------g~~im~sd   64 (136)
T COG2764           4 PYLFFNGNAREALAFYKEVFGAEELKRVPFGDMPSSAGEPPGGRIMHAELRIG-------------------GSTIMLSD   64 (136)
T ss_pred             eEEEECCCHHHHHHHHHHHhCceEEEEEEcCccCccccccccCceEEEEEEEC-------------------CEEEEEec
Confidence            346678 9999999999999999988876655          23333333332                   23344432


Q ss_pred             cCCCCCCCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCEEeecCCCCccc-eEEEEECCCCcEEEEeecCc
Q 029933          101 NWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIFDLKT  177 (185)
Q Consensus       101 ~~~~~~~~~~~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~~~~~~~-~~~~~~DPdG~~iEl~~~~~  177 (185)
                      ......      ...+   .+.-..|.+.++|++++++++.+.|+++..++.+..++ +...++||.|+.|-|-....
T Consensus        65 ~~~~~~------~~~~---~~~s~~l~~~~~d~da~f~~a~~aGa~v~mpl~~~fwG~r~G~v~D~fGv~W~l~~~~~  133 (136)
T COG2764          65 AFPDMG------ATEG---GGTSLSLDLYVEDVDAVFERAAAAGATVVMPLEDTFWGDRYGQVTDPFGVVWMLNTPVE  133 (136)
T ss_pred             CCCccC------cccC---CCeeEEEEEEehHHHHHHHHHHhcCCeEEecchhcCcccceEEEECCCCCEEEEecCcc
Confidence            211111      1111   11335677888899999999999999999988765443 56679999999999977554

>PF14506 CppA_N: CppA N-terminal; PDB: 3E0R_D

Probab=98.63  E-value=1.7e-06  Score=59.79  Aligned_cols=119  Identities=19%  Similarity=0.307  Sum_probs=66.4

Q ss_pred             EEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCCCC
Q 029933           30 QQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPD  109 (185)
Q Consensus        30 ~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~  109 (185)
                      .+-+|+|.|-+..++||++.|||++..+..      .++.++...                 +...+.|-..++...   
T Consensus         2 ~~PvlRVnnR~~ni~FY~~~LGfkll~EEn------a~a~lg~~~-----------------~~erlvlEESP~~rt---   55 (125)
T PF14506_consen    2 IIPVLRVNNRDLNIDFYQKTLGFKLLSEEN------ALAILGDQQ-----------------KEERLVLEESPSMRT---   55 (125)
T ss_dssp             EEEEEEESSHHHHHHHHTTTT--EEEEEET------TEEEEE-TT-------------------EEEEEEE--TTT----
T ss_pred             cCceEEEcCHHHhHHHHHhccCcEEeeccc------cEEEecCCC-----------------CceEEEEecCCcccc---
Confidence            467899999999999999999999998732      245555421                 134455544332210   


Q ss_pred             CCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCEEeecCCCCccceEEEEECCCCcEEEEeecCccccc
Q 029933          110 FKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIGKI  181 (185)
Q Consensus       110 ~~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~~~~~~  181 (185)
                           ..-.++.-+.+|.+.|++.++. +.|.++|.++.. ...+..++.|-+.+|+|+.|.|..-.+..++
T Consensus        56 -----r~V~G~KKl~~ivIkv~~~~EI-e~LLar~~~~~~-l~kg~~gyAfe~vSPEgd~~llhaEdd~~~L  120 (125)
T PF14506_consen   56 -----RAVEGPKKLNRIVIKVPNPKEI-EALLARGAQYDR-LYKGKNGYAFEAVSPEGDRFLLHAEDDISDL  120 (125)
T ss_dssp             -----B--SSS-SEEEEEEEESSHHHH-HHHHHC-S--SE-EEE-SSSEEEEEE-TT--EEEEE--S-GGG-
T ss_pred             -----ccccCcceeeEEEEEcCCHHHH-HHHHhcccccce-eEEcCCceEEEEECCCCCEEEEEEcCCHhHc
Confidence                 0112345678999999986665 556677766332 2224445567788999999999887665543

>COG2514 Predicted ring-cleavage extradiol dioxygenase [General function prediction only]

Probab=98.45  E-value=2e-06  Score=67.45  Aligned_cols=33  Identities=24%  Similarity=0.522  Sum_probs=30.6

Q ss_pred             CceeEEEEEEEeCChHHHHHHHHHhcCCEEeee
Q 029933           25 NGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKR   57 (185)
Q Consensus        25 ~~~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~   57 (185)
                      .+..|.||.|.|.|++++.+||+++|||++..+
T Consensus       165 ~~t~IGHvHL~v~~l~eA~~fY~~~LG~~~~~~  197 (265)
T COG2514         165 AGTIIGHVHLKVADLEEAEQFYEDVLGLEVTAR  197 (265)
T ss_pred             CCcEEeEEEEEeCCHHHHHHHHHHhcCCeeeec
Confidence            345899999999999999999999999999987

>COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins [Amino acid transport and metabolism / General function prediction only]

Probab=98.44  E-value=4.3e-07  Score=73.45  Aligned_cols=106  Identities=20%  Similarity=0.304  Sum_probs=67.5

Q ss_pred             eeEEEEEEEeC--ChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCC
Q 029933           27 YFMQQTMFRIK--DPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT  104 (185)
Q Consensus        27 ~~i~h~~l~v~--D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~  104 (185)
                      ..|+|++..|.  +++....||+++|+|+.....+.++.. ....-              +..--.++...+.|-...+.
T Consensus       166 ~~IDHl~~nv~~~~md~w~~FY~~if~~~~~~~fdi~~p~-tgl~S--------------ram~Sp~G~vrlplN~s~~~  230 (363)
T COG3185         166 TAIDHLTHNVKAGQMDTWVLFYESLFGFREIQYFDIPGPI-TGLRS--------------RAMVSPCGKVRLPLNESADD  230 (363)
T ss_pred             eeechhhhhcchhhHHHHHHHHHHHhCccceeeEeccCCc-ccEEE--------------eeEecCCCcEEeecccCCCc
Confidence            48999888774  999999999999999988776543321 11111              11111222334444222111


Q ss_pred             CC-CCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCEEeecC
Q 029933          105 ES-DPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP  151 (185)
Q Consensus       105 ~~-~~~~~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~  151 (185)
                      .+ ..++.....|.    |++||+|.++||-++.++|+++|+++...|
T Consensus       231 ~sqi~efl~~y~G~----GIQHIA~~T~dI~~tv~~lr~rG~~fl~ip  274 (363)
T COG3185         231 KSQIGEFLREYRGE----GIQHIAFGTDDIYATVAALRERGVKFLPIP  274 (363)
T ss_pred             hhHHHHHHHHhCCC----cceEEEecccHHHHHHHHHHHcCCccCCCc
Confidence            11 11111123333    999999999999999999999999998866

>PF13468 Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B

Probab=98.29  E-value=5e-06  Score=62.07  Aligned_cols=98  Identities=14%  Similarity=0.245  Sum_probs=53.1

Q ss_pred             EEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCCC
Q 029933           29 MQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDP  108 (185)
Q Consensus        29 i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~  108 (185)
                      |+|+.+.|+|++++.++|++.|||.+.....-+..+..-..+.++                   ...|||+.........
T Consensus         1 lDH~v~~v~dl~~a~~~~~~~lGf~~~~gg~h~~~GT~N~li~f~-------------------~~YlEli~i~~~~~~~   61 (175)
T PF13468_consen    1 LDHLVIAVRDLDAAVERFEQRLGFTVTPGGEHPGWGTANALIPFG-------------------DGYLELIAIDPEAPAP   61 (175)
T ss_dssp             EEEEEEE-TTGGG----GGGS--S--EEEEE-TTT-EEEEEEE-S-------------------SSEEEEEEES-HHHST
T ss_pred             CCEEEEEcCCHHHHHHhhhhcceEeecCCCcCCCCccEEEEEeeC-------------------CceEEEEEeCCccccc
Confidence            689999999999999999889999988765544433333333322                   3489998753222211


Q ss_pred             CCCCCCCCC---CCCCCceEEEEEeCCHHHHHHHHHhcCCE
Q 029933          109 DFKGYHNGN---SEPRGFGHIGITVDDVYKACERFERLGVE  146 (185)
Q Consensus       109 ~~~~~~~~~---~~~~g~~hi~~~v~dv~~~~~~l~~~G~~  146 (185)
                      ... .-.+.   ....|+..+|+.++|+++..++|++.|+.
T Consensus        62 ~~~-~~~~~~~~~~~~g~~~~~l~t~d~~~~~~~l~~~G~~  101 (175)
T PF13468_consen   62 DRG-RWFGLDRLAGGEGLYGWALRTDDIEAVAARLRAAGLD  101 (175)
T ss_dssp             GGG-T-TTTHHHHT--EEEEEEEE-S-HHHHHHHHHTTT-E
T ss_pred             ccc-cceechhhcCCCCeEEEEEecCCHHHHHHHHHhcCCC
Confidence            010 10000   12348899999999999999999999986

>PRK10148 hypothetical protein; Provisional

Probab=98.22  E-value=0.00023  Score=51.82  Aligned_cols=51  Identities=10%  Similarity=-0.083  Sum_probs=39.5

Q ss_pred             eEEEEEeCCHHH---HHHHHHhcCCEEeecCCCCccc-eEEEEECCCCcEEEEeec
Q 029933          124 GHIGITVDDVYK---ACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIFDL  175 (185)
Q Consensus       124 ~hi~~~v~dv~~---~~~~l~~~G~~~~~~~~~~~~~-~~~~~~DPdG~~iEl~~~  175 (185)
                      .+|++.++|.++   ++++| +.|.++..++....++ +...++||.|+.|.|...
T Consensus        87 ~~l~l~~~d~ee~~~~~~aL-a~gg~v~mpl~~~~wg~~~g~v~D~fGi~W~l~~~  141 (147)
T PRK10148         87 FTLVLDTQDVEEGKRWFDNL-AANGKIEMAWQETFWAHGFGKVTDKFGVPWMINVV  141 (147)
T ss_pred             EEEEEECCCHHHHHHHHHHh-hCCCEEEecchhcchhhccEEEECCCCCEEEEEec
Confidence            578888888777   55655 6899998887665444 467799999999999765

>KOG0638 consensus 4-hydroxyphenylpyruvate dioxygenase [Amino acid transport and metabolism]

Probab=98.10  E-value=1.3e-05  Score=64.18  Aligned_cols=101  Identities=12%  Similarity=0.245  Sum_probs=63.0

Q ss_pred             eeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecC--CCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCC
Q 029933           27 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFP--EMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT  104 (185)
Q Consensus        27 ~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~  104 (185)
                      .+++|+.+.|.|...+..||+..|||++.......  ...+.-+-+..+                   ....-+.....+
T Consensus        16 l~f~Hi~F~vgna~q~A~~y~~~fGfep~A~~~letg~~~~~s~alr~g-------------------~~vFv~~s~~~p   76 (381)
T KOG0638|consen   16 LRFHHIEFWVGNAKQAARWYCSGFGFEPLAYRGLETGSREWASHALRQG-------------------KIVFVFNSAYNP   76 (381)
T ss_pred             eeeeEEEEEecCcHHHHHHHHhhcCCcchhcccccccchHHHHHHhhcC-------------------CEEEEEecCCCC
Confidence            38999999999999999999999999988643211  111111111110                   111111111111


Q ss_pred             CCCCCCC--CCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCEEeecC
Q 029933          105 ESDPDFK--GYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP  151 (185)
Q Consensus       105 ~~~~~~~--~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~  151 (185)
                      .. +++-  -...|.    +.--+||.|+|++.+.+.+.++|+++..+|
T Consensus        77 ~~-~~~G~~l~~Hgd----gvkdvafeVeD~da~~~~~va~Ga~v~~~p  120 (381)
T KOG0638|consen   77 DN-SEYGDHLVKHGD----GVKDVAFEVEDADAIFQEAVANGAKVVRPP  120 (381)
T ss_pred             Cc-hhhhhhhhhccc----chhceEEEecchHHHHHHHHHcCCcccCCc
Confidence            10 0000  012333    567899999999999999999999999887

>PLN02875 4-hydroxyphenylpyruvate dioxygenase

Probab=98.05  E-value=0.00015  Score=60.92  Aligned_cols=131  Identities=16%  Similarity=0.167  Sum_probs=78.1

Q ss_pred             EEEEEEEeCChHHHHHHHHHhcCCEEeeeeec-CC-CceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCC-
Q 029933           29 MQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDF-PE-MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE-  105 (185)
Q Consensus        29 i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~-  105 (185)
                      ++||.++|.|.+++..||+..|||+.+..... .+ .....+.+..+                   ...+-+.....+. 
T Consensus         1 ~dhvef~v~da~~~~~~f~~~~GF~~~a~~~~~tg~~~~~s~~~r~g-------------------~i~fv~~~~~~~~~   61 (398)
T PLN02875          1 FHHVEFWCGDATNTARRFSWGLGMPLVAKSDLTTGNTTYASYLLRSG-------------------DLVFLFTAPYSPKI   61 (398)
T ss_pred             CeEEEEEcCCHHHHHHHHHHhcCCCeEeecCCCCCCcceEEEEEEeC-------------------CEEEEEeCCCCCcc
Confidence            58999999999999999999999988775431 11 11122222211                   1222222221110 


Q ss_pred             -C--CCCCCCCCCC-----------CCCCCCceEEEEEeCCHHHHHHHHHhcCCEEeecCCCC--c--cc--eEEEEECC
Q 029933          106 -S--DPDFKGYHNG-----------NSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGG--K--LK--GVAFIKDP  165 (185)
Q Consensus       106 -~--~~~~~~~~~~-----------~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~~~~--~--~~--~~~~~~DP  165 (185)
                       .  +...+++...           ..-+.++--++|.|+|++++++++.++|++...+|...  .  .+  ...-+.-+
T Consensus        62 ~~~~~~~~~~~~~~~~~~~~a~~~~~~HG~gV~dvaf~V~Da~~a~~~A~~~Ga~~~~~~~~~~d~~~~g~~~~~~I~~~  141 (398)
T PLN02875         62 GAGDDDPASTAPHPSFSSDAARRFFAKHGLAVRAVGVLVEDAEEAFRTSVAHGARPVLEPTELGDEASGGKAVIAEVELY  141 (398)
T ss_pred             ccccccccccccccccCcHHHHHHHHHcCCeeeEEEEEECCHHHHHHHHHHCCCeeccCCccccccccCceEEEEEEEcc
Confidence             0  0000000000           00123677899999999999999999999998876432  1  11  23446777


Q ss_pred             CCcEEEEeecCcc
Q 029933          166 DDYWIEIFDLKTI  178 (185)
Q Consensus       166 dG~~iEl~~~~~~  178 (185)
                      +|..+-|+++..+
T Consensus       142 G~~~h~lVdr~~~  154 (398)
T PLN02875        142 GDVVLRYVSYKGF  154 (398)
T ss_pred             CCcEEEEEccCCC
Confidence            8888888876543

>PF14696 Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal ; PDB: 1CJX_A 2R5V_A

Probab=97.55  E-value=0.0035  Score=45.11  Aligned_cols=119  Identities=19%  Similarity=0.224  Sum_probs=69.5

Q ss_pred             eEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCC
Q 029933           28 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESD  107 (185)
Q Consensus        28 ~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~  107 (185)
                      .+.+|.+.|.|.+++..++ +.|||+.+.+..  .... ..|.+.                    ...+-|-..  +...
T Consensus         9 G~dFvEFa~~~~~~l~~~~-~~lGF~~~a~hr--sk~v-~l~rQG--------------------~I~~vln~e--p~s~   62 (139)
T PF14696_consen    9 GFDFVEFAVPDAQALAQLF-TALGFQPVARHR--SKDV-TLYRQG--------------------DINFVLNSE--PDSF   62 (139)
T ss_dssp             EEEEEEEE-SSTTSCHHHH-CCCCEEEECCEC--CCSE-EEEEET--------------------TEEEEEEEE--STSC
T ss_pred             CeEEEEEecCCHHHHHHHH-HHhCcceEEecC--Ccce-EEEEeC--------------------CEEEEEeCC--Ccch
Confidence            6888999999988888888 469999887642  1122 222221                    223333221  1110


Q ss_pred             -CCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCEEeecCCCCccceEEEEECCCCcEEEEeecCc
Q 029933          108 -PDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKT  177 (185)
Q Consensus       108 -~~~~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~~  177 (185)
                       ..+. ...|.    +.--++|.|+|.++++++..++|.+....+.....-..--++-++|.++-|+++..
T Consensus        63 a~~~~-~~HG~----sv~aiafrV~Da~~A~~rA~~~GA~~~~~~~~~~e~~~paI~g~G~sl~yfVdr~~  128 (139)
T PF14696_consen   63 AAEFA-AQHGP----SVCAIAFRVDDAAAAYERAVALGAEPVQEPTGPGELNIPAIRGIGGSLHYFVDRYG  128 (139)
T ss_dssp             HHHHH-HHHSS----EEEEEEEEES-HHHHHHHHHHTT--EEEEEEETT-BEEEEEE-CCC-EEEEEE--S
T ss_pred             HHHHH-HhcCC----EEEEEEEEeCCHHHHHHHHHHcCCcCcccCCCCCcEeeeeEEccCCCEEEEEecCC
Confidence             0000 01222    66789999999999999999999998877632222234567888999999988754

>KOG0638 consensus 4-hydroxyphenylpyruvate dioxygenase [Amino acid transport and metabolism]

Probab=96.75  E-value=0.00097  Score=53.64  Aligned_cols=131  Identities=18%  Similarity=0.352  Sum_probs=80.0

Q ss_pred             eeEEEEEEEeC--ChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecC-CCcEE--EEeec
Q 029933           27 YFMQQTMFRIK--DPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG-KPATI--ELTHN  101 (185)
Q Consensus        27 ~~i~h~~l~v~--D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l--~l~~~  101 (185)
                      .+|+|+...+.  .++.+.+||.+.|||.-.+..+.+...  ..|.+.             .+|... ....+  .|-.+
T Consensus       177 ~~iDH~vgn~p~~em~sa~~wy~~~l~Fhrfwsvdd~~v~--te~SaL-------------rs~vlan~~esi~mpinEp  241 (381)
T KOG0638|consen  177 NRIDHVVGNQPDGEMESALRWYEKCLGFHRFWSVDDSQVH--TEYSAL-------------RSIVLANYEESIKMPINEP  241 (381)
T ss_pred             eehhhhhccCCcccchHHHHHHHHhhcccccccCCcchhh--hHHHHH-------------HHHHHhcCCccEEEeccCC
Confidence            47899999998  788999999999999887765432211  111111             111111 11222  22222


Q ss_pred             C-CCCC---CCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCEEeecCCC---------C--------cc----
Q 029933          102 W-GTES---DPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDG---------G--------KL----  156 (185)
Q Consensus       102 ~-~~~~---~~~~~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~~~---------~--------~~----  156 (185)
                      . +...   -.++..+..|    .|++||++.++||-++.+.++++|++++..|..         .        ..    
T Consensus       242 ~~G~k~ksQIqeyv~y~gG----~GvQHiaL~tedIi~Ai~~lr~rG~eFLs~Ps~YYqnl~erl~~~~~~vked~~~l~  317 (381)
T KOG0638|consen  242 APGKKKKSQIQEYVEYHGG----AGVQHIALNTEDIIEAIRGLRARGGEFLSPPSTYYQNLKERLSTSIRKVKEDIKLLE  317 (381)
T ss_pred             CCCCccHHHHHHHHHhcCC----CceeeeeecchHHHHHHHHHHhcCCccccCCHHHHHhHHHHhhhhhhhhhccHHHHH
Confidence            1 1111   0112223444    399999999999999999999999999976621         0        00    


Q ss_pred             -ceEEEEECCCCcEEEEeecC
Q 029933          157 -KGVAFIKDPDDYWIEIFDLK  176 (185)
Q Consensus       157 -~~~~~~~DPdG~~iEl~~~~  176 (185)
                       -....-.|-.|+++.|+.+.
T Consensus       318 el~ILvD~De~gyLLQIFTKp  338 (381)
T KOG0638|consen  318 ELGILVDFDENGYLLQIFTKP  338 (381)
T ss_pred             HcCeEEecCCCcEEeeeeccc
Confidence             11344467779999998854

>PF15067 FAM124: FAM124 family

Probab=96.59  E-value=0.033  Score=43.15  Aligned_cols=110  Identities=15%  Similarity=0.175  Sum_probs=63.1

Q ss_pred             CCceeEEEEEEEeC--ChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeec
Q 029933           24 TNGYFMQQTMFRIK--DPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHN  101 (185)
Q Consensus        24 ~~~~~i~h~~l~v~--D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~  101 (185)
                      .-|..+..++|+|+  |.+.+++||+-+|+-++..+..  +  | ++|.-+...                 ...|.+.-.
T Consensus       124 H~G~EilRftly~~~~N~~d~vr~Yelil~~~~~~~k~--~--F-C~F~lys~~-----------------~~~iQlsLK  181 (236)
T PF15067_consen  124 HYGKEILRFTLYCSFDNYEDMVRFYELILQREPTQQKE--D--F-CFFTLYSQP-----------------GLDIQLSLK  181 (236)
T ss_pred             eccccEEEEEEEecCCCHHHHHHHHHHHhccCcceeeC--C--c-EEEEEecCC-----------------CeEEEEEec
Confidence            33446777999998  9999999999999998866532  2  2 223222111                 344555432


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCEEeecCCCCccceEEEEECCCCcEEEE
Q 029933          102 WGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEI  172 (185)
Q Consensus       102 ~~~~~~~~~~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl  172 (185)
                      .-+   +..+      +.+.-..-+.|.|.|+-+++--| -+.+....+   +.    --+.|||||.|-+
T Consensus       182 ~lp---~~~~------p~p~esavLqF~V~~igqLvpLL-Pnpc~PIS~---~r----WqT~D~DGNkILL  235 (236)
T PF15067_consen  182 QLP---PGMS------PEPTESAVLQFRVEDIGQLVPLL-PNPCSPISE---TR----WQTEDYDGNKILL  235 (236)
T ss_pred             cCC---CCCC------cccccceEEEEEecchhhhcccC-CCCcccccC---Cc----ceeeCCCCCEecc
Confidence            110   0111      11223367899999998875532 333321111   11    2469999999843

>PF06983 3-dmu-9_3-mt: 3-demethylubiquinone-9 3-methyltransferase; PDB: 1U7I_A 1TSJ_A 1U69_D 3L20_B 3OMS_A

Probab=96.41  E-value=0.18  Score=35.05  Aligned_cols=41  Identities=15%  Similarity=0.186  Sum_probs=28.0

Q ss_pred             eEEEEEeCC---HHHHHHHHHhcCCEEeecCCCCccceEEEEECCCCcEEEEe
Q 029933          124 GHIGITVDD---VYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIF  173 (185)
Q Consensus       124 ~hi~~~v~d---v~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~  173 (185)
                      .+|++.+++   ++.++++|.+.|-         +....-.+.|.-|..|.|+
T Consensus        73 ~sl~i~~~~~ee~~~~f~~Ls~gG~---------~~~~~G~v~DkFGv~Wqiv  116 (116)
T PF06983_consen   73 ISLCIECDDEEEIDRIFDKLSEGGQ---------WFSRYGWVTDKFGVSWQIV  116 (116)
T ss_dssp             EEEEEEESSHHHHHHHHHHHHTTTE---------TCCEEEEEE-TTS-EEEEE
T ss_pred             EEEEEEcCCHHHHHHHHHHHHcCCC---------ccceeEEEEeCCCCEEEeC
Confidence            688999997   5556777766665         2223467899999999885

>PF13669 Glyoxalase_4: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; PDB: 3RMU_B 3ISQ_A 1JC5_D 1JC4_D 3HDP_A 2QH0_A 3GM5_A 3OA4_A 3CT8_A

Probab=96.40  E-value=0.0082  Score=40.93  Aligned_cols=56  Identities=27%  Similarity=0.240  Sum_probs=40.0

Q ss_pred             eEEEEEeCCHHHHHHHHHh-cCCEEeecCCC-CccceEEEEECCCC-cEEEEeecCccc
Q 029933          124 GHIGITVDDVYKACERFER-LGVEFAKKPDG-GKLKGVAFIKDPDD-YWIEIFDLKTIG  179 (185)
Q Consensus       124 ~hi~~~v~dv~~~~~~l~~-~G~~~~~~~~~-~~~~~~~~~~DPdG-~~iEl~~~~~~~  179 (185)
                      +||+|.|+|++++.+.+.+ .|+........ ....+..++..++| ..|||+++....
T Consensus         1 dHv~i~V~Dl~~a~~~~~~~lG~~~~~~~~~~~~~v~~~~~~~~~~~~~iELi~p~~~~   59 (109)
T PF13669_consen    1 DHVGIVVPDLDAAAAFYCDVLGFEPWERYRDEPQGVRVAFLYLGDGPVQIELIQPLDGD   59 (109)
T ss_dssp             EEEEEEES-HHHHHHHHHHCTTHEEEEEEEEGCTTEEEEEEEETTETEEEEEEEESSTT
T ss_pred             CEEEEEcCCHHHHHHHHHHhhCCcEEEEEecCCCCEEEEEEEeCCCcEEEEEEEeCCCC
Confidence            5999999999999999998 89876543221 22223566677777 789999977643

>PF14507 CppA_C: CppA C-terminal; PDB: 3E0R_D

Probab=96.03  E-value=0.039  Score=37.32  Aligned_cols=26  Identities=19%  Similarity=0.475  Sum_probs=12.9

Q ss_pred             CceeEEEEEEEeCChHHHHHHHHHhcC
Q 029933           25 NGYFMQQTMFRIKDPKVSLDFYSRVLG   51 (185)
Q Consensus        25 ~~~~i~h~~l~v~D~e~s~~FY~~~LG   51 (185)
                      +.|.+..+.|.|.| +++++||+++||
T Consensus         2 s~F~~e~i~LNV~d-~~~~~fy~~~f~   27 (101)
T PF14507_consen    2 SQFEFESIELNVPD-AKSQSFYQSIFG   27 (101)
T ss_dssp             SSEEE-EEEEEE-T--T---S--H---
T ss_pred             CceEEEEEEEeCCC-hhHHHHHHhccc
Confidence            35788899999999 889999999886

>KOG2944 consensus Glyoxalase [Carbohydrate transport and metabolism]

Probab=95.20  E-value=0.14  Score=37.36  Aligned_cols=61  Identities=16%  Similarity=0.219  Sum_probs=40.6

Q ss_pred             CCCCCCCCCC-----CCCCCceeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCce-EEEeeccCC
Q 029933           11 ANNPGLHTAR-----DEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKF-SLYFLGYED   74 (185)
Q Consensus        11 ~~~~~~~~~~-----~~~~~~~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~-~~~~~~~~~   74 (185)
                      +.+-|..+++     +.++.+..++||||.|+|+.++..-+++ +|.+...+..  +++. ..+|+..++
T Consensus        93 thn~Gtes~~~~~~~ngN~~prGfgHIci~V~di~sac~~lke-kGV~f~Kk~~--dGk~K~iaF~~dpD  159 (170)
T KOG2944|consen   93 THNWGTESPPDQAYLNGNKEPRGFGHICIEVDDINSACERLKE-KGVRFKKKLK--DGKMKPIAFLHDPD  159 (170)
T ss_pred             ecCCCCCCCcchhhcCCCCCCCccceEEEEeCCHHHHHHHHHH-hCceeeecCC--CccccceeEEECCC
Confidence            3445555555     2345556899999999999999999977 8999555432  3333 445555443

>cd08353 Glo_EDI_BRP_like_7 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=94.97  E-value=0.25  Score=34.81  Aligned_cols=47  Identities=15%  Similarity=0.255  Sum_probs=32.8

Q ss_pred             eeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCC
Q 029933           27 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYED   74 (185)
Q Consensus        27 ~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~   74 (185)
                      -.+.|+++.|+|++++.+-.++ .|.++.........+....++..++
T Consensus        86 ~g~~hia~~v~d~d~~~~~l~~-~G~~~~~~~~~~~~~~r~~~~~DPd  132 (142)
T cd08353          86 LGLRRVMFAVDDIDARVARLRK-HGAELVGEVVQYENSYRLCYIRGPE  132 (142)
T ss_pred             CCceEEEEEeCCHHHHHHHHHH-CCCceeCCceecCCCeEEEEEECCC
Confidence            3688999999999999999977 7888765322122334556666554

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>TIGR03645 glyox_marine lactoylglutathione lyase family protein

Probab=94.27  E-value=0.32  Score=35.61  Aligned_cols=56  Identities=30%  Similarity=0.501  Sum_probs=39.9

Q ss_pred             CceEEEEEeCCHHHHHHHHHh-cCCEEeecCC-----C---C---------cc--ceEEEEECCCCcEEEEeecCc
Q 029933          122 GFGHIGITVDDVYKACERFER-LGVEFAKKPD-----G---G---------KL--KGVAFIKDPDDYWIEIFDLKT  177 (185)
Q Consensus       122 g~~hi~~~v~dv~~~~~~l~~-~G~~~~~~~~-----~---~---------~~--~~~~~~~DPdG~~iEl~~~~~  177 (185)
                      ++.||++.|.|+++..+...+ .|+++..++.     +   +         ..  -..+++..++|..||+++...
T Consensus         4 ~i~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ieL~~~~~   79 (162)
T TIGR03645         4 TFSHIGISVPDLDAAVKFYTEVLGWYLIMPPTEIVEDDSAIGEMCTDVFGEGWGSFKIAHLSTGDRIGVELFEFKN   79 (162)
T ss_pred             eEEEEEEEeCCHHHHHHHHHHhcCCEEEeccccccCCCCCCCchhhHHhCCCcceeeEEEEecCCCCcEEEEeccC
Confidence            679999999999999999976 7987753210     0   0         00  124566667788899999764

Members of this protein family share homology with lactoylglutathione lyase (glyoxalase I) and are found mainly in marine members of the gammaproteobacteria, including CPS_0532 from Colwellia psychrerythraea 34H. This family excludes a well-separated, more narrowly distributed paralogous family, exemplified by CPS_3492 from C. psychrerythraea. The function is of this protein family is unknown.

>cd08352 Glo_EDI_BRP_like_1 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=93.60  E-value=0.64  Score=31.34  Aligned_cols=55  Identities=20%  Similarity=0.250  Sum_probs=37.7

Q ss_pred             CceEEEEEeCCHHHHHHHHHh-cCCEEeecCCC-CccceEEEEECCCCcEEEEeecC
Q 029933          122 GFGHIGITVDDVYKACERFER-LGVEFAKKPDG-GKLKGVAFIKDPDDYWIEIFDLK  176 (185)
Q Consensus       122 g~~hi~~~v~dv~~~~~~l~~-~G~~~~~~~~~-~~~~~~~~~~DPdG~~iEl~~~~  176 (185)
                      +++||++.|+|++++.+.+.+ .|+.+...... ......+.+..+++..+|++...
T Consensus         3 ~~~hi~l~v~d~~~a~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~   59 (125)
T cd08352           3 GIHHVAIICSDYEKSKEFYVEILGFKVIREVYRPERGSYKLDLLLNGGYQLELFSFP   59 (125)
T ss_pred             ccceEEEEcCCHHHHHHHHHHhcCCEEeeeeecCCCCcEEEEEecCCCcEEEEEEcC
Confidence            678999999999999999974 79987654321 11112233445677788887644

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins [Amino acid transport and metabolism / General function prediction only]

Probab=93.55  E-value=3.1  Score=34.45  Aligned_cols=108  Identities=19%  Similarity=0.195  Sum_probs=64.2

Q ss_pred             eEEEEEEEeCCh-HHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCC
Q 029933           28 FMQQTMFRIKDP-KVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  106 (185)
Q Consensus        28 ~i~h~~l~v~D~-e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~  106 (185)
                      .+.++.+.|.|. ++..+++ ..|||....+....  . ...|.+                      ..+-++-+....+
T Consensus        22 GfeFvEf~~~d~~~~l~~l~-~~lGF~~~~~Hrsk--~-v~l~rQ----------------------Gdinlvvn~~~~s   75 (363)
T COG3185          22 GFEFVEFAVPDPQEALGALL-GQLGFTAVAKHRSK--A-VTLYRQ----------------------GDINLVVNAEPDS   75 (363)
T ss_pred             ceeEEEEecCCHHHHHHHHH-HHhCcccccccccc--c-eeEEEe----------------------CCEEEEEcCCCcc
Confidence            677788889999 5555555 56999887653211  1 222322                      2344443322211


Q ss_pred             -CCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCEEeecCC----------CCccceEEEEECCC
Q 029933          107 -DPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD----------GGKLKGVAFIKDPD  166 (185)
Q Consensus       107 -~~~~~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~~----------~~~~~~~~~~~DPd  166 (185)
                       ..++. ...|    .+..-++|.|+|...++++..++|.+....+.          .+.++...|+.|.+
T Consensus        76 ~a~~f~-~~Hg----ps~~a~a~~V~DA~~A~a~A~a~gA~~~~~~~g~~e~~ipai~giggsllyfvd~~  141 (363)
T COG3185          76 FAAEFL-DKHG----PSACAMAFRVDDAEQALARALALGARTIDTEIGAGEVDIPAIRGIGGSLLYFVDRY  141 (363)
T ss_pred             hhhHHH-HhcC----CchheeEEeeCCHHHHHHHHHHcCCccccCCCCCccccccceeccCCcEEEEeccC
Confidence             00110 0122    25568999999999999999999995544332          13345578888887

>cd08346 PcpA_N_like N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=93.36  E-value=0.57  Score=31.74  Aligned_cols=56  Identities=18%  Similarity=0.318  Sum_probs=38.4

Q ss_pred             CceEEEEEeCCHHHHHHHHHh-cCCEEeecCCC-Cc-cceEEEEECC---CCcEEEEeecCc
Q 029933          122 GFGHIGITVDDVYKACERFER-LGVEFAKKPDG-GK-LKGVAFIKDP---DDYWIEIFDLKT  177 (185)
Q Consensus       122 g~~hi~~~v~dv~~~~~~l~~-~G~~~~~~~~~-~~-~~~~~~~~DP---dG~~iEl~~~~~  177 (185)
                      ++.||++.|+|+++..+.+.+ .|+++...... .. ....+++.+.   +|..++|++...
T Consensus         1 ~i~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~   62 (126)
T cd08346           1 GLHHVTLITRDAQETVDFYTDVLGLRLVKKTVNQDDPGTYHLFFGDGLGSPGTLLTFFEWPD   62 (126)
T ss_pred             CcccEEEEcCChhHhHHHHHHccCCEEeeeEeccCCCceEEEEEecCCCCCCCEEEEEecCC
Confidence            357999999999999999975 69987654321 11 1223455554   677899887644

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07242 Glo_EDI_BRP_like_6 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=92.60  E-value=0.72  Score=31.62  Aligned_cols=52  Identities=19%  Similarity=0.338  Sum_probs=37.3

Q ss_pred             CceEEEEEeCCHHHHHHHHHhc----CCEEeecCCCCccceEEEEECCCCcEEEEeecCc
Q 029933          122 GFGHIGITVDDVYKACERFERL----GVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKT  177 (185)
Q Consensus       122 g~~hi~~~v~dv~~~~~~l~~~----G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~~  177 (185)
                      +++|+.+.|+|+++..+.+.+.    |.++......    ...|+...++..|++.+...
T Consensus         1 ~i~Hv~i~v~d~~~~~~Fy~~~l~~~G~~~~~~~~~----~~~~~~~~~~~~i~l~~~~~   56 (128)
T cd07242           1 GIHHVELTVRDLERSRAFYDWLLGLLGFEEVKEWED----GRSWRAGDGGTYLVLQQADG   56 (128)
T ss_pred             CCceEEEEeCCHHHHHHHHHHHHhhcCCEEEEeecc----CceEEecCCceEEEEEeccc
Confidence            3589999999999999999776    9887765421    12344335667888887665

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07249 MMCE Methylmalonyl-CoA epimerase (MMCE)

Probab=92.30  E-value=0.67  Score=31.52  Aligned_cols=53  Identities=28%  Similarity=0.330  Sum_probs=37.3

Q ss_pred             eEEEEEeCCHHHHHHHHHh-cCCEEeecCCCC--ccceEEEEECCCCcEEEEeecCc
Q 029933          124 GHIGITVDDVYKACERFER-LGVEFAKKPDGG--KLKGVAFIKDPDDYWIEIFDLKT  177 (185)
Q Consensus       124 ~hi~~~v~dv~~~~~~l~~-~G~~~~~~~~~~--~~~~~~~~~DPdG~~iEl~~~~~  177 (185)
                      .||+|.|+|++++.+.+.. .|..........  .....+++. .+|..++|+++..
T Consensus         2 ~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~-~~~~~l~l~~~~~   57 (128)
T cd07249           2 DHIGIAVPDLEAAIKFYRDVLGVGPWEEEEVPPEQGVRVAFLG-LGNVQIELIEPLD   57 (128)
T ss_pred             cEEEEEeCCHHHHHHHHHHhhCCCCccccccCcccccEEEEEE-cCCEEEEEEEECC
Confidence            6999999999999999986 788876543321  111234544 4788899998654

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases.

>cd07245 Glo_EDI_BRP_like_9 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=91.37  E-value=0.96  Score=29.66  Aligned_cols=54  Identities=17%  Similarity=0.197  Sum_probs=37.1

Q ss_pred             ceEEEEEeCCHHHHHHHHH-hcCCEEeecCCCCccceEEEEECCCCcEEEEeecCcc
Q 029933          123 FGHIGITVDDVYKACERFE-RLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTI  178 (185)
Q Consensus       123 ~~hi~~~v~dv~~~~~~l~-~~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~~~  178 (185)
                      ++||++.|+|++++.+.+. -.|..+...+....  ...++...++..++|+.....
T Consensus         1 i~Hi~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~--~~~~~~~~~~~~i~l~~~~~~   55 (114)
T cd07245           1 LDHVALRVPDLEASRAFYTDVLGLEEGPRPPFLF--PGAWLYAGDGPQLHLIEEDPP   55 (114)
T ss_pred             CCeEEEecCCHHHHHHHHHHccCCcccCcCCCCC--CceEEEeCCCcEEEEEecCCC
Confidence            3699999999999999886 66887765543221  224555455567888876553

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases.

>PRK11478 putative lyase; Provisional

Probab=91.33  E-value=2.6  Score=28.75  Aligned_cols=28  Identities=7%  Similarity=0.114  Sum_probs=23.5

Q ss_pred             eEEEEEEEeCChHHHHHHHHHhcCCEEee
Q 029933           28 FMQQTMFRIKDPKVSLDFYSRVLGMSLLK   56 (185)
Q Consensus        28 ~i~h~~l~v~D~e~s~~FY~~~LG~~~~~   56 (185)
                      .+.|+++.|.|++++.+-..+ .|.++..
T Consensus        75 g~~hi~f~v~d~~~~~~~l~~-~G~~~~~  102 (129)
T PRK11478         75 GLRHLAFSVDDIDAAVAHLES-HNVKCEA  102 (129)
T ss_pred             ceeEEEEEeCCHHHHHHHHHH-cCCeeec
Confidence            578999999999999888766 7988754

>PF13468 Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B

Probab=91.22  E-value=0.21  Score=37.00  Aligned_cols=52  Identities=25%  Similarity=0.438  Sum_probs=28.3

Q ss_pred             ceEEEEEeCCHHHHHHHH-HhcCCEEeecCCCCc---cceEEEEECCCCcEEEEeecCc
Q 029933          123 FGHIGITVDDVYKACERF-ERLGVEFAKKPDGGK---LKGVAFIKDPDDYWIEIFDLKT  177 (185)
Q Consensus       123 ~~hi~~~v~dv~~~~~~l-~~~G~~~~~~~~~~~---~~~~~~~~DPdG~~iEl~~~~~  177 (185)
                      +.||.+.|+|++++.+++ ...|+.+........   ....++|  +++ .|||+...+
T Consensus         1 lDH~v~~v~dl~~a~~~~~~~lGf~~~~gg~h~~~GT~N~li~f--~~~-YlEli~i~~   56 (175)
T PF13468_consen    1 LDHLVIAVRDLDAAVERFEQRLGFTVTPGGEHPGWGTANALIPF--GDG-YLELIAIDP   56 (175)
T ss_dssp             EEEEEEE-TTGGG----GGGS--S--EEEEE-TTT-EEEEEEE---SSS-EEEEEEES-
T ss_pred             CCEEEEEcCCHHHHHHhhhhcceEeecCCCcCCCCccEEEEEee--CCc-eEEEEEeCC
Confidence            369999999999999999 888998875432222   2224454  567 999998644

>cd06587 Glo_EDI_BRP_like This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

Probab=90.78  E-value=1.4  Score=28.46  Aligned_cols=53  Identities=25%  Similarity=0.317  Sum_probs=39.4

Q ss_pred             EEEEEeCCHHHHHHHHHh-cCCEEeecCCCCccceEEEEECCCCcEEEEeecCccc
Q 029933          125 HIGITVDDVYKACERFER-LGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIG  179 (185)
Q Consensus       125 hi~~~v~dv~~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~~~~  179 (185)
                      ||.+.|+|+++..+.+.+ .|.+....... .....+++.+. +..|+|.+..+..
T Consensus         1 Hi~i~~~d~~~~~~fy~~~lg~~~~~~~~~-~~~~~~~~~~~-~~~i~l~~~~~~~   54 (112)
T cd06587           1 HVGLTVSDLEAAVAFYEEVLGFEVLFRNGN-GGAEFAVLGLG-GTRLELFEGDEPA   54 (112)
T ss_pred             CcceeeCCHHHHHHHHHhccCCEEEEeecc-CCEEEEEEecC-CceEEEecCCCCC
Confidence            788999999999999997 89988776542 11234555654 7899999876643

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain clas

>cd08347 PcpA_C_like C-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=90.73  E-value=1.1  Score=32.67  Aligned_cols=52  Identities=12%  Similarity=0.068  Sum_probs=35.9

Q ss_pred             CceEEEEEeCCHHHHHHHHHh-cCCEEeecCCCCccceEEEEEC-CCCcEEEEeecC
Q 029933          122 GFGHIGITVDDVYKACERFER-LGVEFAKKPDGGKLKGVAFIKD-PDDYWIEIFDLK  176 (185)
Q Consensus       122 g~~hi~~~v~dv~~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~D-PdG~~iEl~~~~  176 (185)
                      |++||++.|+|+++..+.+.+ .|.++.....   ....++..+ .++..|++++..
T Consensus         1 gl~HI~i~V~Dle~s~~FY~~~LG~~~~~~~~---~~~~~~~~~~~~~~~l~l~~~~   54 (157)
T cd08347           1 GLHGVTLTVRDPEATAAFLTDVLGFREVGEEG---DRVRLEEGGGGPGAVVDVLEEP   54 (157)
T ss_pred             CcccEEEEeCCHHHHHHHHHHhcCCEEEeeeC---CEEEEEecCCCCCCEEEEEeCC
Confidence            468999999999999999976 5988765432   111222222 357899998853

The C-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>PLN02367 lactoylglutathione lyase

Probab=90.48  E-value=1.7  Score=34.01  Aligned_cols=54  Identities=15%  Similarity=0.130  Sum_probs=38.8

Q ss_pred             eEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeec
Q 029933           28 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHN  101 (185)
Q Consensus        28 ~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~  101 (185)
                      .++|++|.|.|++++.+-.++ .|.++...... ......+|+..++                  +..|||+..
T Consensus       169 G~~HIaf~VdDVdaa~erL~a-~Gv~~v~~P~~-g~~~riaFIkDPD------------------Gn~IEL~e~  222 (233)
T PLN02367        169 GFGHIGITVDDVYKACERFEE-LGVEFVKKPND-GKMKGIAFIKDPD------------------GYWIEIFDL  222 (233)
T ss_pred             CceEEEEEcCCHHHHHHHHHH-CCCEEEeCCcc-CCceEEEEEECCC------------------CCEEEEEec
Confidence            689999999999999999966 99988754321 1113455665544                  568888765

>cd08342 HPPD_N_like N-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HPPD) and hydroxymandelate Synthase (HmaS)

Probab=90.39  E-value=2.2  Score=29.93  Aligned_cols=56  Identities=9%  Similarity=-0.013  Sum_probs=39.8

Q ss_pred             eEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecC
Q 029933           28 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNW  102 (185)
Q Consensus        28 ~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~  102 (185)
                      .+.|+++.|+|++++.+-.++ .|.+++............+++..++                  +..++++...
T Consensus        69 g~~hia~~V~Dvda~~~~l~~-~G~~v~~~p~~~~~~~~~~~i~dp~------------------G~~ie~~~~~  124 (136)
T cd08342          69 GVCDVAFRVDDAAAAYERAVA-RGAKPVQEPVEEPGELKIAAIKGYG------------------DSLHTLVDRK  124 (136)
T ss_pred             ceEEEEEEeCCHHHHHHHHHH-cCCeEccCceecCCeEEEEEEeccC------------------CcEEEEEecC
Confidence            578999999999998888865 7998876543323344566666554                  5688887643

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of HPP to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two, instead of three, su

>cd07263 Glo_EDI_BRP_like_16 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=90.21  E-value=1.8  Score=28.66  Aligned_cols=52  Identities=19%  Similarity=0.142  Sum_probs=35.1

Q ss_pred             EEEEEeCCHHHHHHHHHh-cCCEEeecCCCCccceEEEEECCCC--cEEEEeecC
Q 029933          125 HIGITVDDVYKACERFER-LGVEFAKKPDGGKLKGVAFIKDPDD--YWIEIFDLK  176 (185)
Q Consensus       125 hi~~~v~dv~~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~DPdG--~~iEl~~~~  176 (185)
                      |+++.|.|++++.+.+.+ .|.++............+++.++++  ..|++.+..
T Consensus         1 Hv~l~v~d~~~~~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~   55 (119)
T cd07263           1 LVSLYVDDQDKALAFYTEKLGFEVREDVPMGGGFRWVTVAPPGSPETSLVLAPPA   55 (119)
T ss_pred             CceEEeCCHHHHHHHHHhccCeEEEEeeccCCCcEEEEEeCCCCCeeEEEEeCCC
Confidence            789999999999999986 8998876543111223455666654  456665543

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07235 MRD Mitomycin C resistance protein (MRD)

Probab=89.68  E-value=2.3  Score=28.76  Aligned_cols=47  Identities=23%  Similarity=0.340  Sum_probs=30.7

Q ss_pred             eEEEEEeCCHHHHHHHHHhcCCEEeecCCCCccceEEEEECCCCcEEEEe
Q 029933          124 GHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIF  173 (185)
Q Consensus       124 ~hi~~~v~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~  173 (185)
                      .||.+.|+|+++..+.....|.++.......   ..+.+..++|..|.+.
T Consensus         2 ~~i~l~V~D~~~a~~FY~~LGf~~~~~~~~~---~~~~~~~~~~~~l~l~   48 (122)
T cd07235           2 DAVGIVVADMAKSLDFYRRLGFDFPEEADDE---PHVEAVLPGGVRLAWD   48 (122)
T ss_pred             ceEEEEeccHHHHHHHHHHhCceecCCcCCC---CcEEEEeCCCEEEEEE
Confidence            6999999999999999988898764322111   1233444555555543

Mitomycin C (MC) is a naturally occurring antibiotic, and antitumor agent used in the treatment of cancer. Its antitumor activity is exerted primarily through monofunctional and bifunctional alkylation of DNA. MRD binds to MC and functions as a component of the MC exporting system. MC is bound to MRD by a stacking interaction between a His and a Trp. MRD adopts a structural fold similar to bleomycin resistance protein, glyoxalase I, and extradiol dioxygenases; and it has binding sites at an identical location to binding sites in these evolutionarily related enzymes.

>cd07268 Glo_EDI_BRP_like_4 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=89.57  E-value=6.3  Score=28.59  Aligned_cols=28  Identities=11%  Similarity=0.231  Sum_probs=23.8

Q ss_pred             EEEEEEEeCChHHHHHHHHHhcCCEEee
Q 029933           29 MQQTMFRIKDPKVSLDFYSRVLGMSLLK   56 (185)
Q Consensus        29 i~h~~l~v~D~e~s~~FY~~~LG~~~~~   56 (185)
                      ++|++++|.+.+.+.+|.+.++.+-...
T Consensus         2 ~DHialR~n~~~~A~~w~~~l~~~G~ll   29 (149)
T cd07268           2 IDHIALRVNENQTAERWKEGLLQCGELL   29 (149)
T ss_pred             CceEEEeeCCHHHHHHHHHHHHHhchhh
Confidence            5799999999999999999988774333

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>PF12681 Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B 1JIF_B 1JIE_B 1QTO_A 3OXH_A 2PJS_A 2RBB_A 3SK1_B 3SK2_B 3RRI_A

Probab=89.50  E-value=3.4  Score=27.06  Aligned_cols=45  Identities=9%  Similarity=0.040  Sum_probs=31.0

Q ss_pred             eEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccC
Q 029933           28 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYE   73 (185)
Q Consensus        28 ~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~   73 (185)
                      ...|++|.|.|+++..+...+ +|.++.........+....++..+
T Consensus        56 ~~~~~~~~v~dv~~~~~~l~~-~G~~~~~~~~~~~~g~~~~~~~DP  100 (108)
T PF12681_consen   56 GGFHLCFEVEDVDALYERLKE-LGAEIVTEPRDDPWGQRSFYFIDP  100 (108)
T ss_dssp             SEEEEEEEESHHHHHHHHHHH-TTSEEEEEEEEETTSEEEEEEE-T
T ss_pred             ceeEEEEEEcCHHHHHHHHHH-CCCeEeeCCEEcCCCeEEEEEECC
Confidence            677999999999999999976 899877654322223344455443

...

>cd07233 Glyoxalase_I Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

Probab=89.36  E-value=2.5  Score=28.33  Aligned_cols=54  Identities=20%  Similarity=0.280  Sum_probs=36.3

Q ss_pred             ceEEEEEeCCHHHHHHHHHhc-CCEEeecCCCCc-cceEEEEECCC---CcEEEEeecC
Q 029933          123 FGHIGITVDDVYKACERFERL-GVEFAKKPDGGK-LKGVAFIKDPD---DYWIEIFDLK  176 (185)
Q Consensus       123 ~~hi~~~v~dv~~~~~~l~~~-G~~~~~~~~~~~-~~~~~~~~DPd---G~~iEl~~~~  176 (185)
                      +.|+++.|+|+++..+.+.+. |.++........ ....+++..++   +..+++++..
T Consensus         1 ~~hv~i~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~   59 (121)
T cd07233           1 FLHTMLRVKDLEKSLDFYTDVLGMKLLRRKDFPEGKFTLVFLGYPDEDSEGVLELTYNW   59 (121)
T ss_pred             CeeEEEEecCcHHHHHHHHhccCCeEEEEEecCCCceEEEEecCCCCCCccEEEEEecC
Confidence            369999999999999999865 998875432211 11234555443   5788887643

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic gly

>cd07241 Glo_EDI_BRP_like_3 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=89.33  E-value=3.2  Score=27.86  Aligned_cols=54  Identities=17%  Similarity=0.158  Sum_probs=34.9

Q ss_pred             ceEEEEEeCCHHHHHHHHHh-cCCEEeecC-CCCccceEEEEECCCCcEEEEeecC
Q 029933          123 FGHIGITVDDVYKACERFER-LGVEFAKKP-DGGKLKGVAFIKDPDDYWIEIFDLK  176 (185)
Q Consensus       123 ~~hi~~~v~dv~~~~~~l~~-~G~~~~~~~-~~~~~~~~~~~~DPdG~~iEl~~~~  176 (185)
                      ++||++.|+|+++..+.+.+ .|.+....- .........|+.-.+|..|++++..
T Consensus         2 ~~Hi~l~v~dl~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~   57 (125)
T cd07241           2 IEHVAIWTKDLERMKAFYVTYFGATSNEKYHNPRKGFESYFLSFDDGARLELMTRP   57 (125)
T ss_pred             ceEEEEEecCHHHHHHHHHHHhCCEeeceEeCCCCCceEEEEecCCCcEEEEEcCc
Confidence            37999999999999998876 588764321 1111112234443467889998744

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>PRK11700 hypothetical protein; Provisional

Probab=89.13  E-value=5.5  Score=30.05  Aligned_cols=32  Identities=9%  Similarity=0.048  Sum_probs=26.6

Q ss_pred             CceeEEEEEEEeCChHHHHHHHHHhcCCEEee
Q 029933           25 NGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLK   56 (185)
Q Consensus        25 ~~~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~   56 (185)
                      ..+.++|++++|.+.+.+.+|.+..+.+-...
T Consensus        36 ~~~~~DHialR~n~~~tAe~w~~~l~~~G~ll   67 (187)
T PRK11700         36 SQLEADHIALRCNQNETAERWRQGFLQCGELL   67 (187)
T ss_pred             ccccCcEEEEeeCCHHHHHHHHHHHHHhchhh
Confidence            45678999999999999999999888774443

>cd07237 BphC1-RGP6_C_like C-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=89.13  E-value=2.8  Score=30.18  Aligned_cols=55  Identities=20%  Similarity=0.350  Sum_probs=35.8

Q ss_pred             CCceEEEEEeCCHHHHHHHHHh-cCCEEeecCCC----CccceEEEEE-CCCCcEEEEeec
Q 029933          121 RGFGHIGITVDDVYKACERFER-LGVEFAKKPDG----GKLKGVAFIK-DPDDYWIEIFDL  175 (185)
Q Consensus       121 ~g~~hi~~~v~dv~~~~~~l~~-~G~~~~~~~~~----~~~~~~~~~~-DPdG~~iEl~~~  175 (185)
                      .++.||++.|+|+++..+.+.+ .|+++......    +.....+|+. +...+.|.+.+.
T Consensus         8 ~~l~Hi~l~v~Dl~~a~~FY~~~LGl~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~   68 (154)
T cd07237           8 QGLGHVVLATPDPDEAHAFYRDVLGFRLSDEIDIPLPPGPTARVTFLHCNGRHHSLALAEG   68 (154)
T ss_pred             CccCEEEEEeCCHHHHHHHHHHccCCEEEEEEcccCCCCCcceEEEEEeCCCCCCEEEEcC
Confidence            4789999999999999999976 79987653211    1112234433 445566776543

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the C-terminal, catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its C-terminal repeat is represented in thi

>TIGR03081 metmalonyl_epim methylmalonyl-CoA epimerase

Probab=88.75  E-value=2  Score=29.22  Aligned_cols=53  Identities=19%  Similarity=0.293  Sum_probs=34.6

Q ss_pred             ceEEEEEeCCHHHHHHHHHh-cCCEEeecCCCCccceEEEEECCCCcEEEEeec
Q 029933          123 FGHIGITVDDVYKACERFER-LGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDL  175 (185)
Q Consensus       123 ~~hi~~~v~dv~~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~  175 (185)
                      +.|+++.|+|++++.+.++. .|.++............+++...++..|+|++.
T Consensus         2 i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~   55 (128)
T TIGR03081         2 IDHVGIAVPDLEEAAKLYEDVLGAHVSHIEEVPEQGVKVVFIALGNTKVELLEP   55 (128)
T ss_pred             CCEEEEEeCCHHHHHHHHHHHhCCCCccceeCCCCCcEEEEEecCCEEEEEEec
Confidence            47999999999999999974 698775432111111123333345678888874

Members of this protein family are the enzyme methylmalonyl-CoA epimerase (EC 5.1.99.1), also called methylmalonyl-CoA racemase. This enzyme converts (2R)-methylmalonyl-CoA to (2S)-methylmalonyl-CoA, which is then a substrate for methylmalonyl-CoA mutase (TIGR00642). It is known in bacteria, archaea, and as a mitochondrial protein in animals. It is closely related to lactoylglutathione lyase (TIGR00068), which is also called glyoxylase I, and is also a homodimer.

>PF13670 PepSY_2: Peptidase propeptide and YPEB domain This Prosite motif covers only the active site

Probab=88.70  E-value=1.8  Score=27.97  Aligned_cols=50  Identities=14%  Similarity=0.131  Sum_probs=36.2

Q ss_pred             CHHHHHHHHHhcCCEEeecCCCCccceEEEEECCCCcEEEEeecCccccc
Q 029933          132 DVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIGKI  181 (185)
Q Consensus       132 dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~~~~~~  181 (185)
                      .+.++.+.+.+.|+++..--.+....+.+...|.||+.+||.-.....++
T Consensus        30 ~~~~~~~~l~~~G~~v~~ve~~~~g~yev~~~~~dG~~~ev~vD~~tG~V   79 (83)
T PF13670_consen   30 SIEQAVAKLEAQGYQVREVEFDDDGCYEVEARDKDGKKVEVYVDPATGEV   79 (83)
T ss_pred             CHHHHHHHHHhcCCceEEEEEcCCCEEEEEEEECCCCEEEEEEcCCCCeE
Confidence            67899999999999665432222323578899999999999876554443

This is family M4 in the peptidase classification.

>PF06185 YecM: YecM protein; InterPro: IPR010393 This family consists of several bacterial YecM proteins of unknown function

Probab=88.62  E-value=5.5  Score=30.04  Aligned_cols=33  Identities=12%  Similarity=0.212  Sum_probs=25.1

Q ss_pred             CceeEEEEEEEeCChHHHHHHHHHhcCCEEeee
Q 029933           25 NGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKR   57 (185)
Q Consensus        25 ~~~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~   57 (185)
                      ..+.++|++++|.+.+.+.+|-..++.+-....
T Consensus        31 ~~~~~DHialRvn~~~~A~~~~~~l~~~G~llS   63 (185)
T PF06185_consen   31 SQYEIDHIALRVNSNETAERWKQALLQCGELLS   63 (185)
T ss_dssp             TT-EEEEEEEE-S-HHHHHHHHHHHTTTEEEEE
T ss_pred             cccCCcEEEEecCCHHHHHHHHHHHHHhChhhh
Confidence            457899999999999999999999988754433

; PDB: 1K4N_A.

>PRK10291 glyoxalase I; Provisional

Probab=88.54  E-value=3.5  Score=28.36  Aligned_cols=55  Identities=11%  Similarity=0.093  Sum_probs=36.9

Q ss_pred             eEEEEEEEeCChHHHHHHHHHhcCCEEeeee-ecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeec
Q 029933           28 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRL-DFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHN  101 (185)
Q Consensus        28 ~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~  101 (185)
                      .++|+++.|.|++++.+-.++ .|+++.... ..........++..++                  +..++|+..
T Consensus        65 ~~~hlaf~V~d~~~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~i~DPd------------------G~~iel~~~  120 (129)
T PRK10291         65 AYGHIALSVDNAAEACEKIRQ-NGGNVTREAGPVKGGTTVIAFVEDPD------------------GYKIELIEE  120 (129)
T ss_pred             CeeEEEEEeCCHHHHHHHHHH-cCCccccCCcccCCCceEEEEEECCC------------------CCEEEEEEc
Confidence            688999999999998888866 888776431 1122222344555544                  568888764

>PLN03042 Lactoylglutathione lyase; Provisional

Probab=87.50  E-value=3.2  Score=31.30  Aligned_cols=54  Identities=19%  Similarity=0.191  Sum_probs=37.3

Q ss_pred             eEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeec
Q 029933           28 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHN  101 (185)
Q Consensus        28 ~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~  101 (185)
                      .++|++|.|.|++++.+.+++ .|+++..... ........|+..++                  +..++|+..
T Consensus       121 G~~Hlaf~V~Dvd~~~~~L~~-~Gv~v~~~p~-~~~~~~~~fi~DPd------------------G~~IEl~e~  174 (185)
T PLN03042        121 GFGHIGITVDDVYKACERFEK-LGVEFVKKPD-DGKMKGLAFIKDPD------------------GYWIEIFDL  174 (185)
T ss_pred             CccEEEEEcCCHHHHHHHHHH-CCCeEEeCCc-cCCceeEEEEECCC------------------CCEEEEEEC
Confidence            688999999999999999866 8998775422 11123345555444                  568888754

>cd07255 Glo_EDI_BRP_like_12 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=86.82  E-value=4.8  Score=27.19  Aligned_cols=50  Identities=16%  Similarity=0.291  Sum_probs=35.4

Q ss_pred             CceEEEEEeCCHHHHHHHHHh-cCCEEeecCCCCccceEEEEECCC-CcEEEEeecC
Q 029933          122 GFGHIGITVDDVYKACERFER-LGVEFAKKPDGGKLKGVAFIKDPD-DYWIEIFDLK  176 (185)
Q Consensus       122 g~~hi~~~v~dv~~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~DPd-G~~iEl~~~~  176 (185)
                      .+.||.+.|+|+++..+.+.. .|.++.....     ..+++...+ +..|.+.+..
T Consensus         2 ~i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~~-----~~~~l~~~~~~~~l~l~~~~   53 (125)
T cd07255           2 RIGAVTLRVADLERSLAFYQDVLGLEVLERTD-----STAVLGTGGKRPLLVLEEDP   53 (125)
T ss_pred             EEEEEEEEECCHHHHHHHHHhccCcEEEEcCC-----CEEEEecCCCeEEEEEEeCC
Confidence            357999999999999999986 7998876631     124445444 4667776654

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08358 Glo_EDI_BRP_like_21 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=86.73  E-value=7.3  Score=27.43  Aligned_cols=29  Identities=17%  Similarity=0.222  Sum_probs=24.5

Q ss_pred             CceEEEEEeCCHHHHHHHHH-hcCCEEeec
Q 029933          122 GFGHIGITVDDVYKACERFE-RLGVEFAKK  150 (185)
Q Consensus       122 g~~hi~~~v~dv~~~~~~l~-~~G~~~~~~  150 (185)
                      .+.|+++.|.|++...+... ..|.++...
T Consensus         2 ~~~Hv~irV~DlerSi~FY~~vLG~~~~~~   31 (127)
T cd08358           2 RALHFVFKVGNRNKTIKFYREVLGMKVLRH   31 (127)
T ss_pred             ceEEEEEEeCCHHHHHHHHHHhcCCEEEee
Confidence            35799999999999999995 579987653

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07253 Glo_EDI_BRP_like_2 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=86.51  E-value=4.4  Score=27.05  Aligned_cols=51  Identities=18%  Similarity=0.253  Sum_probs=34.7

Q ss_pred             CceEEEEEeCCHHHHHHHHHh-cCCEEeecCCCCccceEEEEECCCCcEEEEeecC
Q 029933          122 GFGHIGITVDDVYKACERFER-LGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLK  176 (185)
Q Consensus       122 g~~hi~~~v~dv~~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~  176 (185)
                      ++.||.+.|+|+++..+.+.+ .|.++.........   +.+. .++..+++.+..
T Consensus         3 ~l~hi~l~v~d~~~s~~Fy~~~lG~~~~~~~~~~~~---~~~~-~~~~~~~l~~~~   54 (125)
T cd07253           3 RIDHVVLTVADIEATLDFYTRVLGMEVVRFGEEVGR---KALR-FGSQKINLHPVG   54 (125)
T ss_pred             ccceEEEEecCHHHHHHHHHHHhCceeecccccCCc---eEEE-eCCEEEEEecCC
Confidence            678999999999999999987 79988765432111   2223 233677776643

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>PF00903 Glyoxalase: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily This Prosite is specific to glyoxalases This Prosite is specific to Extradiol ring-cleavage dioxygenases This prints entry is specific to bleomycin resistance protein

Probab=85.49  E-value=3.6  Score=27.55  Aligned_cols=53  Identities=32%  Similarity=0.495  Sum_probs=35.1

Q ss_pred             CceEEEEEeCCHHHHHHHHHh-cCCEEeecCC---CCccceEEEEECCCCcEEEEeec
Q 029933          122 GFGHIGITVDDVYKACERFER-LGVEFAKKPD---GGKLKGVAFIKDPDDYWIEIFDL  175 (185)
Q Consensus       122 g~~hi~~~v~dv~~~~~~l~~-~G~~~~~~~~---~~~~~~~~~~~DPdG~~iEl~~~  175 (185)
                      +++||++.|.|+++..+.+.. .|.++.....   ........++...+ ..++++..
T Consensus         1 ~l~Hi~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~   57 (128)
T PF00903_consen    1 GLDHIAIRVKDLEKAIDFYTDVLGFRLVEESDNDGEGGDLRIAFLRIGE-GHIELFLN   57 (128)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTTSEEEEEEEEESTTEEEEEEEEESTS-SCEEEEEE
T ss_pred             CeEEEEEEcCCHHHHHHHHHHHhCCcEEeeeccccccccccceeecccc-cceeeeee
Confidence            368999999999999999876 6998886553   11122244445444 45666553

; InterPro: IPR004360 Glyoxalase I (4.4.1.5 from EC) (lactoylglutathione lyase) catalyzes the first step of the glyoxal pathway. S-lactoylglutathione is then converted by glyoxalase II to lactic acid []. Glyoxalase I is an ubiquitous enzyme which binds one mole of zinc per subunit. The bacterial and yeast enzymes are monomeric while the mammalian one is homodimeric. The sequence of glyoxalase I is well conserved. The domain represented by this entry is found in glyoxalase I and in other related proteins, including fosfomycin resistance proteins FosB [], FosA [], FosX [] and dioxygenases (eg. 4-hydroxyphenylpyruvate dioxygenase).; PDB: 1CJX_A 1NPB_E 3OJT_C 3OJN_A 2IG9_B 3OJJ_B 3OJK_D 1Q0C_D 1F1X_C 3BZA_B ....

>cd08348 BphC2-C3-RGP6_C_like The single-domain 2,3-dihydroxybiphenyl 1,2-dioxygenases (BphC, EC 1

Probab=85.31  E-value=6.8  Score=26.93  Aligned_cols=52  Identities=15%  Similarity=0.295  Sum_probs=35.8

Q ss_pred             ceEEEEEeCCHHHHHHHHHh-cCCEEeecCCCCccceEEEEECC--CCcEEEEeecCc
Q 029933          123 FGHIGITVDDVYKACERFER-LGVEFAKKPDGGKLKGVAFIKDP--DDYWIEIFDLKT  177 (185)
Q Consensus       123 ~~hi~~~v~dv~~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~DP--dG~~iEl~~~~~  177 (185)
                      +.|+.+.|+|+++..+.+.+ .|.++......   ....|+...  .+..+++++...
T Consensus         2 i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~---~~~~~~~~~~~~~~~l~l~~~~~   56 (134)
T cd08348           2 LSHVVLYVRDLEAMVRFYRDVLGFTVTDRGPL---GGLVFLSRDPDEHHQIALITGRP   56 (134)
T ss_pred             eeEEEEEecCHHHHHHHHHHhcCCEEEeeccC---CcEEEEEecCCCceEEEEEecCC
Confidence            47999999999999999976 89987654422   123454433  346778776543

13.11.39) from Rhodococcus globerulus P6, BphC2-RGP6 and BphC3-RGP6, and similar proteins. This subfamily contains Rhodococcus globerulus P6 BphC2-RGP6 and BphC3-RGP6, and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, yielding 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid. This is the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Most type I extradiol dioxygenases are activated by Fe(II). Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC2-RGP6 and BphC3-RGP6 are

>cd07250 HPPD_C_like C-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HppD) and hydroxymandelate Synthase (HmaS)

Probab=85.14  E-value=4.2  Score=30.65  Aligned_cols=56  Identities=14%  Similarity=0.108  Sum_probs=39.5

Q ss_pred             CceEEEEEeC--CHHHHHHHHHh-cCCEEeecCCC-C--ccceEEEEECCCC-cEEEEeecCc
Q 029933          122 GFGHIGITVD--DVYKACERFER-LGVEFAKKPDG-G--KLKGVAFIKDPDD-YWIEIFDLKT  177 (185)
Q Consensus       122 g~~hi~~~v~--dv~~~~~~l~~-~G~~~~~~~~~-~--~~~~~~~~~DPdG-~~iEl~~~~~  177 (185)
                      .+.||++.|+  |++++.+.+.+ .|.+....... .  ......++..|+| ..|+|.++.+
T Consensus         3 ~iDHv~i~V~~~dl~~a~~fY~~~LGf~~~~~~~~~~~~~~~~s~~l~~~~g~i~l~L~~~~~   65 (191)
T cd07250           3 RIDHVVGNVPDGEMDSWVDFYRKVLGFHRFWSFDIEDPYSGLRSRVLASPDGKIRIPLNEPAS   65 (191)
T ss_pred             eeeEEEeecChhHHHHHHHHHHHhhCCceeeEEccCcCcccEEEEEEECCCCcEEEEEecCCC
Confidence            5689999999  99999999865 79977653321 1  1223566777764 6688888654

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of 4-hydroxyphenylpyruvate to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two,

>cd08344 MhqB_like_N N-terminal domain of MhqB, a type I extradiol dioxygenase, and similar proteins

Probab=84.61  E-value=5.7  Score=26.52  Aligned_cols=29  Identities=21%  Similarity=0.426  Sum_probs=24.9

Q ss_pred             CceEEEEEeCCHHHHHHHHHhcCCEEeec
Q 029933          122 GFGHIGITVDDVYKACERFERLGVEFAKK  150 (185)
Q Consensus       122 g~~hi~~~v~dv~~~~~~l~~~G~~~~~~  150 (185)
                      ++.||++.|+|+++..+.+...|.++...
T Consensus         2 ~i~hv~l~v~d~~~s~~FY~~lG~~~~~~   30 (112)
T cd08344           2 SIDHFALEVPDLEVARRFYEAFGLDVREE   30 (112)
T ss_pred             ceeEEEEecCCHHHHHHHHHHhCCcEEee
Confidence            56899999999999999998889887643

This subfamily contains the N-terminal, non-catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd08360 MhqB_like_C C-terminal domain of Burkholderia sp

Probab=83.04  E-value=6.3  Score=27.39  Aligned_cols=30  Identities=10%  Similarity=-0.058  Sum_probs=24.9

Q ss_pred             eeEEEEEEEeCChHHHHHHHHHh--cCCEEee
Q 029933           27 YFMQQTMFRIKDPKVSLDFYSRV--LGMSLLK   56 (185)
Q Consensus        27 ~~i~h~~l~v~D~e~s~~FY~~~--LG~~~~~   56 (185)
                      ..++|+++.|.|+++..+++..+  .|+++..
T Consensus        61 ~g~~hiaf~v~d~~~~~~~~~~l~~~G~~~~~   92 (134)
T cd08360          61 AGFHHAAFEVGDIDEVMLGGNHMLRAGYQTGW   92 (134)
T ss_pred             CcceEEEEEeCCHHHHHHHHHHHHHcCCcccc
Confidence            37899999999999999988777  5777653

NF100 MhqB and similar proteins; MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. This subfamily contains the C-terminal, catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07252 BphC1-RGP6_N_like N-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=82.47  E-value=8  Score=26.19  Aligned_cols=29  Identities=17%  Similarity=0.330  Sum_probs=24.5

Q ss_pred             CceEEEEEeCCHHHHHHHHHh-cCCEEeec
Q 029933          122 GFGHIGITVDDVYKACERFER-LGVEFAKK  150 (185)
Q Consensus       122 g~~hi~~~v~dv~~~~~~l~~-~G~~~~~~  150 (185)
                      ++.|+++.|+|+++..+.+.. .|.+....
T Consensus         2 ~l~~v~l~v~Dl~~s~~FY~~~LG~~~~~~   31 (120)
T cd07252           2 SLGYLGVESSDLDAWRRFATDVLGLQVGDR   31 (120)
T ss_pred             cccEEEEEeCCHHHHHHHHHhccCceeccC
Confidence            457999999999999999976 69987654

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the N-terminal, non-catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of 2,3-dihydroxybiphenyl 1,2-dioxygenases. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its N-

>TIGR00068 glyox_I lactoylglutathione lyase

Probab=81.21  E-value=9.2  Score=27.14  Aligned_cols=46  Identities=11%  Similarity=0.073  Sum_probs=31.3

Q ss_pred             eEEEEEEEeCChHHHHHHHHHhcCCEEeeeee-cCCCceEEEeeccCC
Q 029933           28 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLD-FPEMKFSLYFLGYED   74 (185)
Q Consensus        28 ~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~-~~~~~~~~~~~~~~~   74 (185)
                      .+.|+++.|.|++++.+...+ .|.++..... .+.......|+..++
T Consensus        86 g~~hi~f~v~dld~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~~~DPd  132 (150)
T TIGR00068        86 GFGHIAIGVDDVYKACERVRA-LGGNVVREPGPVKGGTTVIAFVEDPD  132 (150)
T ss_pred             ceeEEEEecCCHHHHHHHHHH-cCCccccCCcccCCCceEEEEEECCC
Confidence            578999999999999999976 8887664321 122233345555544

Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits this model twice.

>cd07238 Glo_EDI_BRP_like_5 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=81.08  E-value=12  Score=24.64  Aligned_cols=28  Identities=11%  Similarity=0.187  Sum_probs=22.8

Q ss_pred             EEEEEEEeCChHHHHHHHHHhcCCEEeee
Q 029933           29 MQQTMFRIKDPKVSLDFYSRVLGMSLLKR   57 (185)
Q Consensus        29 i~h~~l~v~D~e~s~~FY~~~LG~~~~~~   57 (185)
                      ..|+.+.|.|++++.+-+++ .|.++...
T Consensus        58 ~~~i~~~v~d~~~~~~~l~~-~G~~~~~~   85 (112)
T cd07238          58 VPDLSIEVDDVDAALARAVA-AGFAIVYG   85 (112)
T ss_pred             CCEEEEEeCCHHHHHHHHHh-cCCeEecC
Confidence            45899999999999888865 78877654

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structure of this family is a that of a strand-swapped dimer.

>cd08359 Glo_EDI_BRP_like_22 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=80.93  E-value=9.2  Score=25.53  Aligned_cols=26  Identities=12%  Similarity=0.219  Sum_probs=21.6

Q ss_pred             EEEEEeCChHHHHHHHHHhcCCEEeee
Q 029933           31 QTMFRIKDPKVSLDFYSRVLGMSLLKR   57 (185)
Q Consensus        31 h~~l~v~D~e~s~~FY~~~LG~~~~~~   57 (185)
                      |+++.|+|+++..+...+ .|.++...
T Consensus        69 ~~~~~v~did~~~~~l~~-~G~~~~~~   94 (119)
T cd08359          69 ILNFEVDDVDAEYERLKA-EGLPIVLP   94 (119)
T ss_pred             EEEEEECCHHHHHHHHHh-cCCCeeec
Confidence            899999999999999877 68776543

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd04895 ACT_ACR_1 ACT domain-containing protein which is composed almost entirely of four ACT domain repeats (the "ACR" protein)

Probab=80.47  E-value=6.8  Score=24.79  Aligned_cols=39  Identities=15%  Similarity=0.139  Sum_probs=28.6

Q ss_pred             HHHHHHHHHhcCCEEeecCC--CCc-cceEEEEECCCCcEEE
Q 029933          133 VYKACERFERLGVEFAKKPD--GGK-LKGVAFIKDPDDYWIE  171 (185)
Q Consensus       133 v~~~~~~l~~~G~~~~~~~~--~~~-~~~~~~~~DPdG~~iE  171 (185)
                      +..+.+.|...|+.+...-.  .+. ....||+.|.+|+.++
T Consensus        15 L~~i~~~l~~~gl~I~~AkIsT~Gerv~DvFyV~d~~g~kl~   56 (72)
T cd04895          15 LLEAVQVLTDLDLCITKAYISSDGGWFMDVFHVTDQLGNKLT   56 (72)
T ss_pred             HHHHHHHHHHCCcEEEEEEEeecCCeEEEEEEEECCCCCCCC
Confidence            56677889999999876432  222 2348999999998874

This CD includes the N-terminal ACT domain, of a novel type of ACT domain-containing protein which is composed almost entirely of four ACT domain repeats (the "ACR" protein). ACR proteins, found only in Arabidopsis and Oryza, as yet, are proposed to function as novel regulatory or sensor proteins in plants. Nine ACR gene products have been described (ACR1-8 in Arabidopsis and OsARC1-9 in Oryza) and are represented in this CD. Members of this CD belong to the superfamily of ACT regulatory domains.

>cd07257 THT_oxygenase_C The C-terminal domain of 2,4,5-Trihydroxytoluene (THT) oxygenase, which is an extradiol dioxygenease in the 2,4-dinitrotoluene (DNT) degradation pathway

Probab=80.18  E-value=10  Score=27.16  Aligned_cols=31  Identities=10%  Similarity=-0.060  Sum_probs=24.1

Q ss_pred             eeEEEEEEEeCChHHHHHHHHHh--cCCEEeee
Q 029933           27 YFMQQTMFRIKDPKVSLDFYSRV--LGMSLLKR   57 (185)
Q Consensus        27 ~~i~h~~l~v~D~e~s~~FY~~~--LG~~~~~~   57 (185)
                      -.++|+++.|.|+++..+.+..+  .|+++...
T Consensus        66 ~g~~Hiaf~v~die~~~~~~~~L~~~Gv~v~~~   98 (153)
T cd07257          66 SGVHHAAFEVHDFDAQGLGHDYLREKGYEHVWG   98 (153)
T ss_pred             CceeEEEEEcCCHHHHHHHHHHHHHCCCcEeec
Confidence            37999999999999998666554  57776643

This subfamily contains the C-terminal, catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>cd07247 SgaA_N_like N-terminal domain of Streptomyces griseus SgaA (suppression of growth disturbance caused by A-factor at a high concentration under high osmolality during early growth phase), and similar domains

Probab=80.04  E-value=12  Score=24.66  Aligned_cols=51  Identities=16%  Similarity=0.155  Sum_probs=32.4

Q ss_pred             eEEEEEeCCHHHHHHHHHh-cCCEEeecCCCCccceEEEEECCCCcEEEEeecC
Q 029933          124 GHIGITVDDVYKACERFER-LGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLK  176 (185)
Q Consensus       124 ~hi~~~v~dv~~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~  176 (185)
                      .|++|.|+|+++..+.+.. .|+++.......  ...+++...++..+.++...
T Consensus         2 ~hi~l~v~d~~~s~~FY~~~lG~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~   53 (114)
T cd07247           2 VWFELPTTDPERAKAFYGAVFGWTFEDMGDGG--GDYAVFSTGGGAVGGLMKAP   53 (114)
T ss_pred             EEEEeeCCCHHHHHHHHHhccCceeeeccCCC--CceEEEEeCCccEEEEecCC
Confidence            5999999999999999986 499876544211  12233343333455555544

SgaA suppresses the growth disturbances caused by high osmolarity and a high concentration of A-factor, a microbial hormone, during the early growth phase in Streptomyces griseus. A-factor (2-isocapryloyl-3R-hydroxymethyl-gamma-butyrolactone) controls morphological differentiation and secondary metabolism in Streptomyces griseus. It is a chemical signaling molecule that at a very low concentration acts as a switch for yellow pigment production, aerial mycelium formation, streptomycin production, and streptomycin resistance. The structure and amino acid sequence of SgaA are closely related to a group of antibiotics resistance proteins, including bleomycin resistance protein, mitomycin resistance protein, and fosfomycin resistance proteins. SgaA might also function as a strep

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	185
2za0_A	184	Crystal Structure Of Mouse Glyoxalase I Complexed W		9e-61
1fro_A	183	Human Glyoxalase I With Benzyl-Glutathione Inhibito		5e-57
3vw9_A	187	Human Glyoxalase I With An N-Hydroxypyridone Inhibi		6e-57
1bh5_A	183	Human Glyoxalase I Q33e, E172q Double Mutant Length		3e-56
1f9z_A	135	Crystal Structure Of The Ni(Ii)-Bound Glyoxalase I		3e-19
2c21_A	144	Specificity Of The Trypanothione-Dependednt Leishma		3e-13

>pdb|2ZA0|A Chain A, Crystal Structure Of Mouse Glyoxalase I Complexed With Methyl-Gerfelin Length = 184

Iteration: 1
 Score =  229 bits (583), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 105/161 (65%), Positives = 126/161 (78%), Gaps = 1/161 (0%)
Query: 21  DEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPA 80
           D +T  + +QQTM RIKDPK SLDFY+RVLG++LL++LDFP MKFSLYFL YED    P 
Sbjct: 24  DPSTKDFLLQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPK 83
Query: 81  DPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERF 140
           D  ++T WTF + AT+ELTHNWGTE D + + YHNGNS+PRGFGHIGI V DVY AC+RF
Sbjct: 84  DKSEKTAWTFSRKATLELTHNWGTEDD-ETQSYHNGNSDPRGFGHIGIAVPDVYSACKRF 142
Query: 141 ERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIGKI 181
           E LGV+F KKPD GK+KG+AFI+DPD YWIEI +   I  I
Sbjct: 143 EELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILNPNKIATI 183

>pdb|1FRO|A Chain A, Human Glyoxalase I With Benzyl-Glutathione Inhibitor Length = 183

Iteration: 1
 Score =  216 bits (551), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 97/154 (62%), Positives = 120/154 (77%), Gaps = 1/154 (0%)
Query: 21  DEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPA 80
           D +T  + +QQTM R+KDPK SLDFY+RVLGM+L+++ DFP MKFSLYFL YED    P 
Sbjct: 23  DPSTKDFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPK 82
Query: 81  DPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERF 140
           +  ++  W   + AT+ELTHNWGTE D + + YHNGNS+PRGFGHIGI V DVY AC+RF
Sbjct: 83  EKDEKIAWALSRKATLELTHNWGTEDD-ETQSYHNGNSDPRGFGHIGIAVPDVYSACKRF 141
Query: 141 ERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFD 174
           E LGV+F KKPD GK+KG+AFI+DPD YWIEI +
Sbjct: 142 EELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILN 175

>pdb|3VW9|A Chain A, Human Glyoxalase I With An N-Hydroxypyridone Inhibitor Length = 187

Iteration: 1
 Score =  216 bits (550), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 97/154 (62%), Positives = 120/154 (77%), Gaps = 1/154 (0%)
Query: 21  DEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPA 80
           D +T  + +QQTM R+KDPK SLDFY+RVLGM+L+++ DFP MKFSLYFL YED    P 
Sbjct: 27  DPSTKDFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPK 86
Query: 81  DPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERF 140
           +  ++  W   + AT+ELTHNWGTE D + + YHNGNS+PRGFGHIGI V DVY AC+RF
Sbjct: 87  EKDEKIAWALSRKATLELTHNWGTEDD-ETQSYHNGNSDPRGFGHIGIAVPDVYSACKRF 145
Query: 141 ERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFD 174
           E LGV+F KKPD GK+KG+AFI+DPD YWIEI +
Sbjct: 146 EELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILN 179

>pdb|1BH5|A Chain A, Human Glyoxalase I Q33e, E172q Double Mutant Length = 183

Iteration: 1
 Score =  214 bits (544), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 95/154 (61%), Positives = 120/154 (77%), Gaps = 1/154 (0%)
Query: 21  DEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPA 80
           D +T  + +Q+TM R+KDPK SLDFY+RVLGM+L+++ DFP MKFSLYFL YED    P 
Sbjct: 23  DPSTKDFLLQETMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPK 82
Query: 81  DPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERF 140
           +  ++  W   + AT+ELTHNWGTE D + + YHNGNS+PRGFGHIGI V DVY AC+RF
Sbjct: 83  EKDEKIAWALSRKATLELTHNWGTEDD-ETQSYHNGNSDPRGFGHIGIAVPDVYSACKRF 141
Query: 141 ERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFD 174
           E LGV+F KKPD GK+KG+AFI+DPD YWI+I +
Sbjct: 142 EELGVKFVKKPDDGKMKGLAFIQDPDGYWIQILN 175

>pdb|1F9Z|A Chain A, Crystal Structure Of The Ni(Ii)-Bound Glyoxalase I From Escherichia Coli Length = 135

Iteration: 1
 Score = 90.9 bits (224), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 54/154 (35%), Positives = 83/154 (53%), Gaps = 27/154 (17%)
Query: 29  MQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVW 88
           +  TM R+ D + S+DFY++VLGM LL+  + PE K+SL F+GY      P         
Sbjct: 3   LLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGY-----GPET------- 50
Query: 89  TFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFA 148
              + A IELT+NWG +       Y  G +    +GHI ++VD+  +ACE+  + G    
Sbjct: 51  ---EEAVIELTYNWGVDK------YELGTA----YGHIALSVDNAAEACEKIRQNGGNVT 97
Query: 149 KK--PDGGKLKGVAFIKDPDDYWIEIFDLKTIGK 180
           ++  P  G    +AF++DPD Y IE+ + K  G+
Sbjct: 98  REAGPVKGGTTVIAFVEDPDGYKIELIEEKDAGR 131

>pdb|2C21|A Chain A, Specificity Of The Trypanothione-Dependednt Leishmania Major Glyoxalase I: Structure And Biochemical Comparison With The Human Enzyme Length = 144

Iteration: 1
 Score = 71.6 bits (174), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 47/150 (31%), Positives = 71/150 (47%), Gaps = 28/150 (18%)
Query: 29  MQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVW 88
           M  TM R+ D   S+ FY+  LGM +L++ D PE K++L FLGY    S+          
Sbjct: 9   MLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSS---------- 58
Query: 89  TFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFA 148
                  +ELT+N+G  S                +GHI I V+DV +      +  V   
Sbjct: 59  -----TVLELTYNYGVTS----------YKHDEAYGHIAIGVEDVKELVADMRKHDVPID 103
Query: 149 KKPDGGKLKGVAFIKDPDDYWIEIFDLKTI 178
            + + G +   AF+ DPD Y+IE+ + KT+
Sbjct: 104 YEDESGFM---AFVVDPDGYYIELLNEKTM 130

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	185
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	1e-70
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	1e-53
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	5e-51
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	3e-37
2p25_A	126	Glyoxalase family protein; structural genomics, MC	5e-26
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	3e-23
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	9e-23
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	8e-21
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	6e-20
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	2e-18
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	1e-16
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	7e-15
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	2e-14
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	1e-11
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	1e-11
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	2e-11
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	3e-11
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	4e-11
3ghj_A	141	Putative integron gene cassette protein; integron	5e-10
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	2e-09
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	3e-09
3huh_A	152	Virulence protein STM3117; structural genomics, ny	3e-09
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	5e-09
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	1e-08
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	1e-08
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	1e-08
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	2e-08
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	3e-08
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	4e-08
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	9e-08
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	2e-07
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	2e-07
1nki_A	135	Probable fosfomycin resistance protein; potassium	5e-07
3m2o_A	164	Glyoxalase/bleomycin resistance protein; unknown f	6e-07
2i7r_A	118	Conserved domain protein; structural genomics cons	7e-07
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	7e-07
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	8e-07
3rri_A	135	Glyoxalase/bleomycin resistance protein/dioxygena;	9e-07
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	1e-06
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	3e-06
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	5e-06
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	6e-06
3bt3_A	148	Glyoxalase-related enzyme, ARAC type; VOC superfam	8e-06
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	8e-06
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	4e-05
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	9e-05
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	1e-04
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	1e-04
2r6u_A	148	Uncharacterized protein; structural genomics, PSI-	7e-04

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* Length = 184

 Score =  211 bits (537), Expect = 1e-70
 Identities = 108/184 (58%), Positives = 130/184 (70%), Gaps = 4/184 (2%)

Query: 1   MASSEPKE---SPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKR 57
           MA  +P     +        +  D +T  + +QQTM RIKDPK SLDFY+RVLG++LL++
Sbjct: 1   MAEPQPASSGLTDETAFSCCSDPDPSTKDFLLQQTMLRIKDPKKSLDFYTRVLGLTLLQK 60

Query: 58  LDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGN 117
           LDFP MKFSLYFL YED    P D  ++T WTF + AT+ELTHNWGTE D     YHNGN
Sbjct: 61  LDFPAMKFSLYFLAYEDKNDIPKDKSEKTAWTFSRKATLELTHNWGTEDDETQS-YHNGN 119

Query: 118 SEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKT 177
           S+PRGFGHIGI V DVY AC+RFE LGV+F KKPD GK+KG+AFI+DPD YWIEI +   
Sbjct: 120 SDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILNPNK 179

Query: 178 IGKI 181
           I  I
Sbjct: 180 IATI 183

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A Length = 135

 Score =  166 bits (422), Expect = 1e-53
 Identities = 51/154 (33%), Positives = 77/154 (50%), Gaps = 27/154 (17%)

Query: 29  MQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVW 88
           +  TM R+ D + S+DFY++VLGM LL+  + PE K+SL F+GY                
Sbjct: 3   LLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETE----------- 51

Query: 89  TFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFA 148
                A IELT+NWG +                 +GHI ++VD+  +ACE+  + G    
Sbjct: 52  ----EAVIELTYNWGVDK----------YELGTAYGHIALSVDNAAEACEKIRQNGGNVT 97

Query: 149 K--KPDGGKLKGVAFIKDPDDYWIEIFDLKTIGK 180
           +   P  G    +AF++DPD Y IE+ + K  G+
Sbjct: 98  REAGPVKGGTTVIAFVEDPDGYKIELIEEKDAGR 131

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1 Length = 144

 Score =  159 bits (405), Expect = 5e-51
 Identities = 46/148 (31%), Positives = 70/148 (47%), Gaps = 28/148 (18%)

Query: 27  YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRT 86
             M  TM R+ D   S+ FY+  LGM +L++ D PE K++L FLGY    S+        
Sbjct: 7   RRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSST------- 59

Query: 87  VWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVE 146
                    +ELT+N+G  S      Y +       +GHI I V+DV +      +  V 
Sbjct: 60  --------VLELTYNYGVTS------YKHDE----AYGHIAIGVEDVKELVADMRKHDVP 101

Query: 147 FAKKPDGGKLKGVAFIKDPDDYWIEIFD 174
              + + G +   AF+ DPD Y+IE+ +
Sbjct: 102 IDYEDESGFM---AFVVDPDGYYIELLN 126

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans} Length = 134

 Score =  124 bits (314), Expect = 3e-37
 Identities = 29/144 (20%), Positives = 49/144 (34%), Gaps = 21/144 (14%)

Query: 32  TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 91
               + D   S +FY   LG  +++    P+       L   D                 
Sbjct: 9   VALIVSDYDKSYEFYVNQLGFEVIRENHRPKRHDYKLDLKCGDI---------------- 52

Query: 92  KPATIELTHNWGTESD-PDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKK 150
               +E+  N  T+S+        +   E  G  H+   V+DV  + +    LG+   + 
Sbjct: 53  ---ELEIFGNKLTDSNYCAPPERISWPREACGLRHLAFYVEDVEASRQELIALGIRVEEV 109

Query: 151 P-DGGKLKGVAFIKDPDDYWIEIF 173
             D    K +AF  DPD   +E+ 
Sbjct: 110 RYDDYTGKKMAFFFDPDGLPLELH 133

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis} Length = 126

 Score = 95.6 bits (238), Expect = 5e-26
 Identities = 23/143 (16%), Positives = 41/143 (28%), Gaps = 27/143 (18%)

Query: 32  TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 91
                 + + + +FY   LG  +L+    PE       L                     
Sbjct: 9   VAINASNYQATKNFYVEKLGFEVLRENHRPEKNDIKLDLKLGSQ---------------- 52

Query: 92  KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP 151
               +E+  +    + P          E  G  H+   V+ + +        G+E     
Sbjct: 53  ---ELEIFISDQFPARPS-------YPEALGLRHLAFKVEHIEEVIAFLNEQGIETEPLR 102

Query: 152 -DGGKLKGVAFIKDPDDYWIEIF 173
            D    K + F  DPD   +E+ 
Sbjct: 103 VDDFTGKKMTFFFDPDGLPLELH 125

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} Length = 134

 Score = 88.6 bits (220), Expect = 3e-23
 Identities = 29/149 (19%), Positives = 53/149 (35%), Gaps = 26/149 (17%)

Query: 29  MQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVW 88
           +      + D + +  FY  +LG  + + +  PE   S+ F+   +T             
Sbjct: 6   LNHVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVNLGNT------------- 52

Query: 89  TFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFA 148
                  +EL H  G +S           ++  G  HI I VD++  A    ++  +   
Sbjct: 53  ------KMELLHPLGLDSPIA---GFLQKNKAGGMHHICIEVDNINAAVMDLKKKKIRSL 103

Query: 149 KKP--DGGKLKGVAFI--KDPDDYWIEIF 173
            +    G   K V F+  KD     +E+ 
Sbjct: 104 SEEVKIGAHGKPVIFLHPKDCGGVLVELE 132

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans} Length = 161

 Score = 88.3 bits (219), Expect = 9e-23
 Identities = 28/148 (18%), Positives = 42/148 (28%), Gaps = 27/148 (18%)

Query: 29  MQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVW 88
           +      +   K  L FY   L + LL   D P     + FL   ++             
Sbjct: 9   LDHIGIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQGVKIAFLEIGES------------- 55

Query: 89  TFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFA 148
                  IEL      ES         G        HI I V  + +  +  +  GV+  
Sbjct: 56  ------KIELLEPLSEESPIAKFIQKRGEG----IHHIAIGVKSIEERIQEVKENGVQMI 105

Query: 149 KKP--DGGKLKGVAFI--KDPDDYWIEI 172
                 G +   VAF+  +       E 
Sbjct: 106 NDEPVPGARGAQVAFLHPRSARGVLYEF 133

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A Length = 133

 Score = 82.5 bits (204), Expect = 8e-21
 Identities = 27/144 (18%), Positives = 48/144 (33%), Gaps = 27/144 (18%)

Query: 32  TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 91
             + +K+   +L  + R+  +   + +     K  + F+                     
Sbjct: 11  IGYAVKNIDSALKKFKRLGYVEESEVVRDEVRKVYIQFVINGGY---------------- 54

Query: 92  KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP 151
               +EL    G +S P  K    G        HI   V+D+ K+ E   ++G    KK 
Sbjct: 55  ---RVELVAPDGEDS-PINKTIKKG----STPYHICYEVEDIQKSIEEMSQIGYTLFKKA 106

Query: 152 ---DGGKLKGVAFIKDPDDYWIEI 172
                   + VAF+   D   IE+
Sbjct: 107 EIAPAIDNRKVAFLFSTDIGLIEL 130

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei} Length = 144

 Score = 80.7 bits (199), Expect = 6e-20
 Identities = 21/148 (14%), Positives = 40/148 (27%), Gaps = 37/148 (25%)

Query: 29  MQQTMFRI--KDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRT 86
           + Q + R+   D   +L+FY  +L   +  R + P+    L  +      +   + +   
Sbjct: 5   ILQILSRLYVADLNPALEFYEELLETPVAMRFEIPQTGVELAQISTILLIAGSEEAL--- 61

Query: 87  VWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVE 146
                                           +P         VD + K     E  G E
Sbjct: 62  --------------------------------KPFRNTQATFLVDSLDKFKTFLEENGAE 89

Query: 147 FAKKPDGGKLKGVAFIKDPDDYWIEIFD 174
             + P          ++  D   IE  +
Sbjct: 90  IIRGPSKVPTGRNMTVRHSDGSVIEYVE 117

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str} Length = 127

 Score = 76.1 bits (187), Expect = 2e-18
 Identities = 27/145 (18%), Positives = 45/145 (31%), Gaps = 30/145 (20%)

Query: 32  TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 91
                 + +    FY    G +     +     F+ YFL +ED                 
Sbjct: 7   VALWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSFEDG---------------- 50

Query: 92  KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITV---DDVYKACERFERLGVEFA 148
             A +E+                    E  G+ HI I+    + V +  E+  + G   A
Sbjct: 51  --ARLEIMSRTDVTGKT--------TGENLGWAHIAISTGTKEAVDELTEKLRQDGFAIA 100

Query: 149 KKP-DGGKLKGVAFIKDPDDYWIEI 172
            +P   G     + + DP+   IEI
Sbjct: 101 GEPRMTGDGYYESVVLDPEGNRIEI 125

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102} Length = 156

 Score = 71.8 bits (176), Expect = 1e-16
 Identities = 23/144 (15%), Positives = 39/144 (27%), Gaps = 21/144 (14%)

Query: 32  TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 91
               ++D + S  FY  +LG+  L   + P     L                    +   
Sbjct: 23  IALNVQDMQASRYFYGTILGLHELTDDEVPATLTEL------------VASGKVANFITP 70

Query: 92  KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVY--KACERFERLGVEFAK 149
               ++L                          H+   +D     +A        +  A 
Sbjct: 71  DGTILDLFGEPELSPPDPNPEK-----TFTRAYHLAFDIDPQLFDRAVTVIGENKIAIAH 125

Query: 150 KP-DGGKLKGVAFIKDPDDYWIEI 172
            P      +GV +  DPD + IEI
Sbjct: 126 GPVTRPTGRGV-YFYDPDGFMIEI 148

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6 Length = 153

 Score = 67.6 bits (165), Expect = 7e-15
 Identities = 21/142 (14%), Positives = 50/142 (35%), Gaps = 11/142 (7%)

Query: 32  TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 91
               ++    ++ F+   +G++L  R +  E +++    G        A      + T  
Sbjct: 15  VSIVVESLDNAISFFEE-IGLNLEGRANV-EGEWAGRVTGLGSQCVEIA-----MMVTPD 67

Query: 92  KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP 151
             + IEL+      +  D +          G+  +  TV+D+ +   R  + G E   + 
Sbjct: 68  GHSRIELSRFLTPPTIADHR---TAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEV 124

Query: 152 -DGGKLKGVAFIKDPDDYWIEI 172
                   + +I+  +   I +
Sbjct: 125 VQYENSYRLCYIRGVEGILIGL 146

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila} Length = 155

 Score = 66.3 bits (161), Expect = 2e-14
 Identities = 22/143 (15%), Positives = 39/143 (27%), Gaps = 22/143 (15%)

Query: 31  QTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTF 90
            T   + D   +  FY+  LG  +   +     ++           +             
Sbjct: 29  LTNVFVDDQAKAESFYTGKLGFLVKADVPVGADRWLTVVSPEAPDGTQ------------ 76

Query: 91  GKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKK 150
                + L  +      P  +          G       VDD+    ER   LGV F ++
Sbjct: 77  -----LLLEPSSHAAVTPFKEALVAD-----GIPAASFAVDDIAAEYERLSALGVRFTQE 126

Query: 151 PDGGKLKGVAFIKDPDDYWIEIF 173
           P        A + D     I++ 
Sbjct: 127 PTDMGPVVTAILDDTCGNLIQLM 149

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens} Length = 160

 Score = 59.0 bits (143), Expect = 1e-11
 Identities = 23/144 (15%), Positives = 40/144 (27%), Gaps = 29/144 (20%)

Query: 32  TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 91
           T     D   +  FY  V G+ ++ +                         +   +  F 
Sbjct: 12  TALYADDLDAAEAFYRDVFGLEMVLK-------------------------LPGQLVFFK 46

Query: 92  KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFA 148
               + L  +    S  D       +    G GH     D   +V +   RFE L +   
Sbjct: 47  CGRQMLLLFDPQESSRADANNPIPRH-GAVGQGHFCFYADDKAEVDEWKTRFEALEIPVE 105

Query: 149 KKPDGGKLKGVAFIKDPDDYWIEI 172
                       +I+DP    +E+
Sbjct: 106 HYHRWPNGSYSVYIRDPAGNSVEV 129

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str} Length = 126

 Score = 58.3 bits (141), Expect = 1e-11
 Identities = 16/142 (11%), Positives = 35/142 (24%), Gaps = 35/142 (24%)

Query: 31  QTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTF 90
           Q    +   + +  FY   +GM  + + +  + +   +F           +         
Sbjct: 15  QVAAPVGCEEEARAFYGETIGMEEIPKPEELKKRGGCWFKCGNQEIHIGVEQ-------- 66

Query: 91  GKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKK 150
                                     N  P    H    V  + +  +   + G+E    
Sbjct: 67  --------------------------NFNPAKRAHPAFYVLKIDEFKQELIKQGIEVIDD 100

Query: 151 PDGGKLKGVAFIKDPDDYWIEI 172
                +    ++ DP    IE 
Sbjct: 101 HARPDVIRF-YVSDPFGNRIEF 121

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus} Length = 145

 Score = 58.1 bits (140), Expect = 2e-11
 Identities = 22/150 (14%), Positives = 34/150 (22%), Gaps = 35/150 (23%)

Query: 33  MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 92
                D  VS  F+  VLG  +    + P+ +F    L   D                  
Sbjct: 10  ELYCFDINVSQSFFVDVLGFEVKY--ERPDEEFVYLTLDGVDVM-------------LEG 54

Query: 93  PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP- 151
            A        G    P   G            +    V D+    +R      +      
Sbjct: 55  IAGKSRKWLSGDLEFPLGSGV-----------NFQWDVIDIEPLYQRVNESAADSIYLAL 103

Query: 152 ------DGGKLKGV--AFIKDPDDYWIEIF 173
                  G  +       ++ PD Y     
Sbjct: 104 ESKSYQCGDSIATQKQFMVQTPDGYLFRFC 133

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP} Length = 136

 Score = 57.4 bits (139), Expect = 3e-11
 Identities = 21/140 (15%), Positives = 36/140 (25%), Gaps = 31/140 (22%)

Query: 37  KDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATI 96
           +D  +S  +Y+ +L    L R       F                               
Sbjct: 14  RDLDISCRWYTEILDWKELVRGRGDTTSF--AHGVLPGG-------------------LS 52

Query: 97  ELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITV---DDVYKACERFERLGVEFAKKPDG 153
            +           F           G  H+  +V    D+    ER  + G  F    + 
Sbjct: 53  IVLREHDGGGTDLFDETR------PGLDHLSFSVESMTDLDVLEERLAKAGAAFTPTQEL 106

Query: 154 GKLKGVAFIKDPDDYWIEIF 173
                +AF +D D+  +E  
Sbjct: 107 PFGWILAF-RDADNIALEAM 125

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8 Length = 139

 Score = 57.2 bits (138), Expect = 4e-11
 Identities = 19/147 (12%), Positives = 37/147 (25%), Gaps = 31/147 (21%)

Query: 35  RIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPA 94
                   + FY   L +  +         +     G                       
Sbjct: 18  PTGQLDEIIRFYEEGLCLKRIGEFSQHN-GYDGVMFGLPHA-----------------DY 59

Query: 95  TIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKP 151
            +E T   G  + P           P     +   V +   +     + + +G +  +  
Sbjct: 60  HLEFTQYEGGSTAPV----------PHPDSLLVFYVPNAVELAAITSKLKHMGYQEVESE 109

Query: 152 DGGKLKGVAFIKDPDDYWIEIFDLKTI 178
           +     G   I+DPD + I   + K I
Sbjct: 110 NPYWSNGGVTIEDPDGWRIVFMNSKGI 136

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium} Length = 141

 Score = 54.2 bits (131), Expect = 5e-10
 Identities = 17/144 (11%), Positives = 45/144 (31%), Gaps = 40/144 (27%)

Query: 32  TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 91
              ++K+ + S  FY+ +LG            +++  ++                    G
Sbjct: 32  VAVKVKNLEKSSQFYTEILGFEAGLL--DSARRWNFLWVS-------------------G 70

Query: 92  KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVD--DVYKACERFERLGVEFAK 149
           +   + L      + + +               H    V+  ++    +  E  GV    
Sbjct: 71  RAGMVVL------QEEKENWQQQ----------HFSFRVEKSEIEPLKKALESKGVSVHG 114

Query: 150 KPDGGKLKGVA-FIKDPDDYWIEI 172
             +   ++ V+ +  DP+ + +E 
Sbjct: 115 PVNQEWMQAVSLYFADPNGHALEF 138

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str} Length = 141

 Score = 52.6 bits (126), Expect = 2e-09
 Identities = 23/149 (15%), Positives = 43/149 (28%), Gaps = 36/149 (24%)

Query: 29  MQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVW 88
               +  ++D   S  FY   LG+ +L+        F L+  G+                
Sbjct: 9   FVNPIPFVRDINRSKSFYRDRLGLKILEDFG----SFVLFETGF---------------A 49

Query: 89  TFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEF- 147
                +  E      +++   +               +     DV  A +      VE  
Sbjct: 50  IHEGRSLEETIWRTSSDAQEAYGR---------RNMLLYFEHADVDAAFQDIAP-HVELI 99

Query: 148 ---AKKPDGGKLKGVAFIKDPDDYWIEIF 173
               ++  G +   V    DPD + IE+ 
Sbjct: 100 HPLERQAWGQR---VFRFYDPDGHAIEVG 125

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens} Length = 147

 Score = 52.4 bits (125), Expect = 3e-09
 Identities = 28/145 (19%), Positives = 49/145 (33%), Gaps = 37/145 (25%)

Query: 33  MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 92
           +  +K  K +  FYS++LGM   + + F E + +L F                       
Sbjct: 32  VMTVKSIKDTTMFYSKILGM---EVMTFKEDRKALCFGDQ-------------------- 68

Query: 93  PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP- 151
                L H  G E +P        +  P       IT   + +  +  +   V   + P 
Sbjct: 69  --KFNL-HEVGKEFEP-----KAAHPVPGSLDICLITEVPLEEMIQHLKACDVPIEEGPV 120

Query: 152 ----DGGKLKGVAFIKDPDDYWIEI 172
                 G +  + + +DPD   IE+
Sbjct: 121 PRTGAKGPIMSI-YFRDPDRNLIEV 144

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygenase, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A Length = 152

 Score = 52.3 bits (125), Expect = 3e-09
 Identities = 28/143 (19%), Positives = 45/143 (31%), Gaps = 35/143 (24%)

Query: 34  FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKP 93
             + D   ++ FY  VLG S +    F + + +L F                        
Sbjct: 29  LTVSDISTTIRFYEEVLGFSAVT---FKQNRKALIFGAQ--------------------- 64

Query: 94  ATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP-- 151
             I L H    E +P           P       IT   +        + G+   + P  
Sbjct: 65  -KINL-HQQEMEFEP-----KASRPTPGSADLCFITSTPINDVVSEILQAGISIVEGPVE 117

Query: 152 -DGGKLKGVA-FIKDPDDYWIEI 172
             G   + ++ +I+DPD   IEI
Sbjct: 118 RTGATGEIMSIYIRDPDGNLIEI 140

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2 Length = 141

 Score = 51.7 bits (124), Expect = 5e-09
 Identities = 23/143 (16%), Positives = 47/143 (32%), Gaps = 38/143 (26%)

Query: 32  TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 91
               + D + S+ F+  +LG++L  R +        Y    +                  
Sbjct: 8   LTLAVSDLQKSVTFWHELLGLTLHARWNT-----GAYLTCGDLW---------------- 46

Query: 92  KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITV--DDVYKACERFERLGVEFAK 149
               + L+++   +  P          +   + H   TV  +D     +R E+ GV   K
Sbjct: 47  ----VCLSYDEARQYVP---------PQESDYTHYAFTVAEEDFEPLSQRLEQAGVTIWK 93

Query: 150 KPDGGKLKGVAFIKDPDDYWIEI 172
           +          +  DPD + +E+
Sbjct: 94  QNKSEG-ASF-YFLDPDGHKLEL 114

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100} Length = 128

 Score = 50.4 bits (120), Expect = 1e-08
 Identities = 23/149 (15%), Positives = 39/149 (26%), Gaps = 35/149 (23%)

Query: 29  MQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVW 88
           +          +  L FY R++G        F   K      G E   +           
Sbjct: 7   ITSITINTSHLQGMLGFY-RIIG------FQFTASKVDK---GSEVHRAVHNG------- 49

Query: 89  TFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERL-GVEF 147
                    L                N          +G  + D+ K  +   ++ G   
Sbjct: 50  -----VEFSLY------------SIQNPQRSQIPSLQLGFQITDLEKTVQELVKIPGAMC 92

Query: 148 AKKPDGGKLKGVAFIKDPDDYWIEIFDLK 176
              P        A + DPD + IE+ +L+
Sbjct: 93  ILDPTDMPDGKKAIVLDPDGHSIELCELE 121

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2 Length = 113

 Score = 49.7 bits (119), Expect = 1e-08
 Identities = 19/146 (13%), Positives = 34/146 (23%), Gaps = 44/146 (30%)

Query: 32  TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 91
               + D   + +F  +  G++                                      
Sbjct: 7   LNLTVADVVAAREFLEKYFGLTCSGTRGNA-------------------------FAVMR 41

Query: 92  KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFA 148
                 LT   G E              P+ F H+G   +    V K  +R +  G    
Sbjct: 42  DNDGFILTLMKGKEVQY-----------PKTF-HVGFPQESEEQVDKINQRLKEDGFLVE 89

Query: 149 KKPDGGKLKGVAF-IKDPDDYWIEIF 173
                       F ++ P  + IE+ 
Sbjct: 90  PPKHAH---AYTFYVEAPGGFTIEVM 112

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A Length = 148

 Score = 50.4 bits (120), Expect = 2e-08
 Identities = 22/149 (14%), Positives = 38/149 (25%), Gaps = 23/149 (15%)

Query: 30  QQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWT 89
               +   D   +  +Y    G   L R + PE       +      +            
Sbjct: 11  DHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHM--------- 61

Query: 90  FGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEF-- 147
                 +++      ES        +         H+   VDD+          GV+   
Sbjct: 62  ----TQVQVMAPLNDESTVAKWLAKHNGRAG--LHHMAWRVDDIDAVSATLRERGVQLLY 115

Query: 148 --AKKPDGGKLKGVAFI--KDPDDYWIEI 172
              K   GG    + F+  K      IE+
Sbjct: 116 DEPKLGTGGNR--INFMHPKSGKGVLIEL 142

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A* Length = 133

 Score = 49.2 bits (117), Expect = 3e-08
 Identities = 28/144 (19%), Positives = 44/144 (30%), Gaps = 37/144 (25%)

Query: 34  FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKP 93
             + D   + +FY +VLGM     + F   + +L F   +                    
Sbjct: 16  LTVADIPTTTNFYEKVLGMKA---VSFGAGRIALEFGHQKIN------------------ 54

Query: 94  ATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP-- 151
                 H  G E +P        N          IT   +  A +  E  GV   + P  
Sbjct: 55  -----LHQLGNEFEP-----KAQNVRVGSADLCFITDTVLSDAMKHVEDQGVTIMEGPVK 104

Query: 152 ---DGGKLKGVAFIKDPDDYWIEI 172
                G +    + +DPD   IE+
Sbjct: 105 RTGAQGAITSF-YFRDPDGNLIEV 127

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis} Length = 159

 Score = 49.5 bits (118), Expect = 4e-08
 Identities = 27/161 (16%), Positives = 52/161 (32%), Gaps = 24/161 (14%)

Query: 27  YFMQQTMFRIK----------DPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTA 76
           + M + +  ++          D + SL  Y+   G+   +     +   +          
Sbjct: 8   HSMSKNILDMRNTVQIGIVVRDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGR--- 64

Query: 77  SAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKA 136
             P     +  +    P  +EL       S   ++ + + N E  G  HI   V D+ + 
Sbjct: 65  --PTKARAKLAFFELGPLQLELIEPDENPST--WREFLDKNGE--GIHHIAFVVKDMDRK 118

Query: 137 CERFERLGVEFA-KKPDGGKLKGVAFI--KDPDDYWIEIFD 174
            E   R G++   K    G     A+I         IE+ +
Sbjct: 119 VEELYRKGMKVIQKGDFEG--GRYAYIDTLRALKVMIELLE 157

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens} Length = 144

 Score = 48.1 bits (114), Expect = 9e-08
 Identities = 21/156 (13%), Positives = 44/156 (28%), Gaps = 43/156 (27%)

Query: 28  FMQQTMFRI-------KDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPA 80
           + Q  M           +P  S  FY  +LG+  ++                        
Sbjct: 18  YFQGHMTHPDFTILYVDNPPASTQFYKALLGVDPVESSP--------------------- 56

Query: 81  DPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDD---VYKAC 137
                +++       + L      E      G         G G +   V++   V +  
Sbjct: 57  ---TFSLFVLANGMKLGLWSRHTVEPKASVTG---------GGGELAFRVENDAQVDETF 104

Query: 138 ERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIF 173
             ++  GV   ++P   +        DPD + + ++
Sbjct: 105 AGWKASGVAMLQQPAKMEFGYTFTAADPDSHRLRVY 140

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125} Length = 146

 Score = 47.2 bits (112), Expect = 2e-07
 Identities = 24/148 (16%), Positives = 45/148 (30%), Gaps = 35/148 (23%)

Query: 33  MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 92
              +   + S+ F+  +LG                  LGYED             +  GK
Sbjct: 25  EINVDHLEESIAFWDWLLG-----------------ELGYEDYQ----SWSRGKSYKHGK 63

Query: 93  PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITV---DDVYKACERFERLGVEFAK 149
                 T+    +++  F+          G  H+       + V +  ++ +  G     
Sbjct: 64  ------TYLVFVQTEDRFQTPTFHRKRT-GLNHLAFHAASREKVDELTQKLKERGDPILY 116

Query: 150 KP----DGGKLKGVAFIKDPDDYWIEIF 173
           +      GG      F +DP+   +EI 
Sbjct: 117 EDRHPFAGGPNHYAVFCEDPNRIKVEIV 144

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2 Length = 139

 Score = 47.2 bits (112), Expect = 2e-07
 Identities = 19/142 (13%), Positives = 41/142 (28%), Gaps = 31/142 (21%)

Query: 32  TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 91
             F ++D +        V     +        +FSL    +                   
Sbjct: 8   MTFIVRDLERMTRILEGVFDAREVYA--SDTEQFSLSREKFFL----------------- 48

Query: 92  KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP 151
               I +    G +     + Y++            I   D  +  ER  +LG++     
Sbjct: 49  -IGDIWVAIMQGEKLAE--RSYNH--------IAFKIDDADFDRYAERVGKLGLDMRPPR 97

Query: 152 DGGKLKGVA-FIKDPDDYWIEI 172
              + +G + +  D D++  E+
Sbjct: 98  PRVEGEGRSIYFYDDDNHMFEL 119

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A Length = 135

 Score = 45.9 bits (109), Expect = 5e-07
 Identities = 25/147 (17%), Positives = 36/147 (24%), Gaps = 49/147 (33%)

Query: 32  TMFRIKDPKVSLDFYSRVLGMSLLKR------LDFPEMKFSLYFLGYEDTASAPADPVDR 85
               + D   S+ FY  +LG  L  R      L+   +   L     E     PA     
Sbjct: 8   LTLAVADLPASIAFYRDLLGFRLEARWDQGAYLELGSLWLCLSR---EPQYGGPAAD--- 61

Query: 86  TVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGV 145
                        TH                          GI   D  +   +    GV
Sbjct: 62  ------------YTHY-----------------------AFGIAAADFARFAAQLRAHGV 86

Query: 146 EFAKKPDGGKLKGVAFIKDPDDYWIEI 172
              K+          +  DPD + +E 
Sbjct: 87  REWKQNRSEG-DSF-YFLDPDGHRLEA 111

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2 Length = 118

 Score = 45.2 bits (107), Expect = 7e-07
 Identities = 19/155 (12%), Positives = 37/155 (23%), Gaps = 47/155 (30%)

Query: 29  MQQTMFRI--KDPKVSLDFYSRVLGMSLLKRLD-FPEMKFSLYFLGYEDTASAPADPVDR 85
           M      I   +          +L        D F +     + L        P +    
Sbjct: 4   MNLNQLDIIVSNVPQVCADLEHILDKKADYANDGFAQFTIGSHCLMLSQNHLVPLENFQS 63

Query: 86  TVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGV 145
            +                                      I I V+DV +  +R   LG+
Sbjct: 64  GII-------------------------------------IHIEVEDVDQNYKRLNELGI 86

Query: 146 EFAKKPD----GGKLKGVAFIKDPDDYWIEIFDLK 176
           +    P     G +      ++ P    ++ + +K
Sbjct: 87  KVLHGPTVTDWGTE---SLLVQGPAGLVLDFYRMK 118

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A* Length = 252

 Score = 47.0 bits (111), Expect = 7e-07
 Identities = 30/199 (15%), Positives = 46/199 (23%), Gaps = 46/199 (23%)

Query: 16  LHTARDEATNGYFMQQTM------FRIKDPKVSLDFYSRVLGMSLLKR------------ 57
            H       N YF               +    L FY+ +LG   +              
Sbjct: 8   HHHHHSSGENLYFQGHMTSIKQLTLYTAELDRMLAFYTNMLGAQHVHEQADAFTIQLGVS 67

Query: 58  -LDF---PEMKFSLYFLGY----EDTASAPADPVDRTVWTFGKPATIELTHNWGTES--- 106
            + F    +     Y +             A                     +   S   
Sbjct: 68  QIQFRAAADGTKPFYHIAINIAANHFQEGKAWLSGFGELLTENDEDQAYFPFFNAYSCYV 127

Query: 107 -DPD-----FKGYHN---------GNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP 151
            DP                        +    G I IT  DV +A  R ++       K 
Sbjct: 128 EDPSGNIIELISRQQAAPVLDKPFSADQLLSIGEINITTSDVEQAATRLKQAE--LPVKL 185

Query: 152 DGGKLKGVAFIKDPDDYWI 170
           D  +  G+ FI D D + +
Sbjct: 186 DQIEPAGLNFIGDQDLFLL 204

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A Length = 133

 Score = 45.2 bits (107), Expect = 8e-07
 Identities = 22/146 (15%), Positives = 45/146 (30%), Gaps = 37/146 (25%)

Query: 32  TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 91
               +KD   +  F   +     +      +  FSL    +   A               
Sbjct: 8   ITLIVKDLNKTTAFLQNIFNAEEIYS--SGDKTFSLSKEKFFLIAG-------------- 51

Query: 92  KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITV--DDVYKACERFERLGVEF-- 147
               I +                  + + R + HI   +  ++V +  ER + LGVE   
Sbjct: 52  --LWICIMEGD--------------SLQERTYNHIAFQIQSEEVDEYTERIKALGVEMKP 95

Query: 148 AKKPDGGKLKGVAFIKDPDDYWIEIF 173
            +    G+ + + +  D D++  E+ 
Sbjct: 96  ERPRVQGEGRSI-YFYDFDNHLFELH 120

>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp} Length = 135

 Score = 45.5 bits (107), Expect = 9e-07
 Identities = 20/153 (13%), Positives = 36/153 (23%), Gaps = 38/153 (24%)

Query: 34  FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKP 93
              +D   + DFY   LG  L +R      + +L F G +                    
Sbjct: 15  IPARDLDEAYDFYVTKLGCKLARR---YPDRITLDFFGDQLVC----------------- 54

Query: 94  ATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP-- 151
                 H              +       FG             +  ++ G+ F      
Sbjct: 55  ------HLSDRWDREVSMYPRH-------FGITFRDKKHFDNLYKLAKQRGIPFYHDLSR 101

Query: 152 ---DGGKLKGVAFIKDPDDYWIEIFDLKTIGKI 181
                 +     F+ DP +  +E         +
Sbjct: 102 RFEGLIEEHETFFLIDPSNNLLEFKYYFDDRMM 134

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10 Length = 338

 Score = 46.9 bits (111), Expect = 1e-06
 Identities = 29/161 (18%), Positives = 50/161 (31%), Gaps = 37/161 (22%)

Query: 25  NGYFMQQTMFRIK----------DPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYED 74
           N YF    M+ IK          +   +  FY  VLG+  +K     +     Y L Y D
Sbjct: 17  NLYFQSNAMYEIKGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSM-YHLFYGD 75

Query: 75  TASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDD-- 132
              +P      T  +F                  +                IG+ V    
Sbjct: 76  KTGSPG-----TELSFF-----------------EIPLVGRTYRGTNAITRIGLLVPSED 113

Query: 133 -VYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEI 172
            ++   ERFE+  V+ ++         + F +D +   + +
Sbjct: 114 SLHYWKERFEKFDVKHSEMTTYANRPALQF-EDAEGLRLVL 153

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2 Length = 119

 Score = 43.6 bits (103), Expect = 3e-06
 Identities = 20/146 (13%), Positives = 37/146 (25%), Gaps = 44/146 (30%)

Query: 32  TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 91
                 +P  +  FY  +LGM +     +                          + T  
Sbjct: 11  ANIATPEPARAQAFYGDILGMPVAMDHGW--------------------------IVTHA 44

Query: 92  KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAK-- 149
            P       ++  E                    + I VD+  +   R  + G+      
Sbjct: 45  SPLEAHAQVSFAREGGSG-----------TDVPDLSIEVDNFDEVHARILKAGLPIEYGP 93

Query: 150 --KPDGGKLKGVAFIKDPDDYWIEIF 173
             +  G +     F++DP    I I 
Sbjct: 94  VTEAWGVQ---RLFLRDPFGKLINIL 116

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans} Length = 141

 Score = 43.4 bits (102), Expect = 5e-06
 Identities = 22/147 (14%), Positives = 33/147 (22%), Gaps = 43/147 (29%)

Query: 37  KDPKVSLDFYSRVLGMSLLKRLD---FPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKP 93
           +D      FY +V G   ++ +    F  +      +G                  F   
Sbjct: 17  RDIVAMSAFYQQVFGFQEIESIRSPIFRGLDTGKSCIG------------------FNAH 58

Query: 94  ATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKK 150
              EL          +  G             +   VD    V K        G    K 
Sbjct: 59  EAYEL---MQLAQFSETSG---------IKFLLNFDVDTKEAVDKLVPVAIAAGATLIKA 106

Query: 151 P----DGGKLKGVAFIKDPDDYWIEIF 173
           P            A + DP+     I 
Sbjct: 107 PYETYYHWY---QAVLLDPERNVFRIN 130

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP} Length = 137

 Score = 42.9 bits (101), Expect = 6e-06
 Identities = 21/146 (14%), Positives = 36/146 (24%), Gaps = 35/146 (23%)

Query: 32  TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 91
                 DP  ++D+  RV G  LL R            L                     
Sbjct: 6   VELAYTDPDRAVDWLVRVFGFRLLLRQPAIG-TIRHADLDTGG----------------- 47

Query: 92  KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEF---- 147
               + +       +     G             + + V DV +   R    G +     
Sbjct: 48  --GIVMVRRTGEPYTVSCAGG--------HTCKQVIVWVSDVDEHFMRSTAAGADIVQPL 97

Query: 148 AKKPDGGKLKGVAFIKDPDDYWIEIF 173
             KP G +      ++D + +  E  
Sbjct: 98  QDKPWGLR---QYLVRDLEGHLWEFT 120

>3bt3_A Glyoxalase-related enzyme, ARAC type; VOC superfamily, PSI-2, NYSGXRC, structural genomics, prote structure initiative; 2.50A {Clostridium phytofermentans} Length = 148

 Score = 42.8 bits (100), Expect = 8e-06
 Identities = 21/157 (13%), Positives = 49/157 (31%), Gaps = 34/157 (21%)

Query: 23  ATNGYFMQQT--MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPA 80
           +  GY +++   ++  KD   ++ ++  +LG             +S   +  +D      
Sbjct: 14  SERGYVVRENGPVYFTKDMDKTVKWFEEILG-------------WSGDIVARDDEGFG-- 58

Query: 81  DPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERF 140
                    F  P+ + + H         F+G+H    EP       + ++ +    +  
Sbjct: 59  ----DYGCVFDYPSEVAVAHL------TPFRGFHLFKGEPIKGVAGFMMIEGIDALHKYV 108

Query: 141 ERLGVEFAKKPD----GGKLKGVAFIKDPDDYWIEIF 173
           +  G +          G +      I   D   +  F
Sbjct: 109 KENGWDQISDIYTQPWGAR---ECSITTTDGCILRFF 142

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila} Length = 148

 Score = 42.8 bits (100), Expect = 8e-06
 Identities = 19/146 (13%), Positives = 39/146 (26%), Gaps = 36/146 (24%)

Query: 31  QTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTF 90
             +F +K+P  S +FY  +L    ++                              ++  
Sbjct: 9   LVLFYVKNPAKSEEFYKNLLDTQPIESSP------------------------TFAMFVM 44

Query: 91  GKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITV---DDVYKACERFERLGVEF 147
                + L      E      G         G   +   V   + V +   ++    +  
Sbjct: 45  KTGLRLGLWAQEEIEPKAHQTG---------GGMELSFQVNSNEMVDEIHRQWSDKEISI 95

Query: 148 AKKPDGGKLKGVAFIKDPDDYWIEIF 173
            + P            DPD++ + IF
Sbjct: 96  IQPPTQMDFGYTFVGVDPDEHRLRIF 121

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi} Length = 150

 Score = 41.2 bits (96), Expect = 4e-05
 Identities = 22/138 (15%), Positives = 36/138 (26%), Gaps = 28/138 (20%)

Query: 37  KDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATI 96
            D + S  FY    G + + R      +   Y +     A+                   
Sbjct: 14  GDLEASARFYGEGFGWAPVFRNP----EIIFYQMNGFVLATWLVQ--------------- 54

Query: 97  ELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKL 156
            L  + G                     H      +V    ER    G +  +  D    
Sbjct: 55  NLQEDVGVAVTSRPGSMA--------LAHNVRAETEVAPLMERLVAAGGQLLRPADAPPH 106

Query: 157 KGV-AFIKDPDDYWIEIF 173
            G+  ++ DPD +  EI 
Sbjct: 107 GGLRGYVADPDGHIWEIA 124

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp} Length = 335

 Score = 40.9 bits (95), Expect = 9e-05
 Identities = 34/144 (23%), Positives = 49/144 (34%), Gaps = 33/144 (22%)

Query: 35  RIKDPKVSLDFYSRVLGMSLLK---RLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 91
            +  P+ + DFY+ VLG+ L+K     D P      Y L + +                G
Sbjct: 15  IVGHPQENTDFYAGVLGLRLVKQTVNFDDPGT----YHLYFGNEG--------------G 56

Query: 92  KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDD--VYKACERFERLGVEFAK 149
           KP TI     W         G   G       G     V    +    +R E+  V + K
Sbjct: 57  KPGTIITFFPW--------AGARQGVIGDGQVGVTSYVVPKGAMAFWEKRLEKFNVPYTK 108

Query: 150 KPDGGKLKGVAFIKDPDDYWIEIF 173
               G+ + V F  DP    +EI 
Sbjct: 109 IERFGE-QYVEF-DDPHGLHLEIV 130

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A* Length = 138

 Score = 39.4 bits (92), Expect = 1e-04
 Identities = 29/152 (19%), Positives = 43/152 (28%), Gaps = 41/152 (26%)

Query: 31  QTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTF 90
                ++D   SL+FY R LG+ +                        PA+         
Sbjct: 7   LFAVVVEDMAKSLEFY-RKLGVEI------------------------PAEADSAPHTEA 41

Query: 91  GKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITV-----DDVYKACERFERLGV 145
                I L  +    +    + Y      P G     I         V K        G 
Sbjct: 42  VLDGGIRLAWD----TVETVRSYDPEWQAPTGGHRFAIAFEFPDTASVDKKYAELVDAGY 97

Query: 146 EFAKKP----DGGKLKGVAFIKDPDDYWIEIF 173
           E   KP     G +    A +KDPD   +++F
Sbjct: 98  EGHLKPWNAVWGQR---YAIVKDPDGNVVDLF 126

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A* Length = 132

 Score = 39.2 bits (91), Expect = 1e-04
 Identities = 21/149 (14%), Positives = 36/149 (24%), Gaps = 41/149 (27%)

Query: 31  QTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTF 90
             +  + + + S DFY  +     +                                  F
Sbjct: 16  LQLVYVSNVERSTDFYRFIFKKEPVFVTP--------------------------RYVAF 49

Query: 91  GKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGIT------VDDVYKACERFERLG 144
                       G E            +E   F  IGI       VD ++    + +   
Sbjct: 50  PSSGDALFAIWSGGEEPV---------AEIPRFSEIGIMLPTGEDVDKLFNEWTKQKSHQ 100

Query: 145 VEFAKKPDGGKLKGVAFIKDPDDYWIEIF 173
           +   K+P          I DPD + I + 
Sbjct: 101 IIVIKEPYTDVFGRTFLISDPDGHIIRVC 129

>2r6u_A Uncharacterized protein; structural genomics, PSI-2, RHA04853, MCSG, protein structur initiative, midwest center for structural genomics; 1.50A {Rhodococcus SP} Length = 148

 Score = 37.6 bits (87), Expect = 7e-04
 Identities = 21/143 (14%), Positives = 43/143 (30%), Gaps = 40/143 (27%)

Query: 37  KDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATI 96
            D   +  FY    G ++    + P+M +S+   G    +  P +P              
Sbjct: 34  DDGDRARAFYRDAFGWAI---AEIPDMDYSMVTTGPVGESGMPDEPG------------- 77

Query: 97  ELTHNWGTESDPDFKGYHNGNSEPRGFGH--IGITVDDVYKACERFERLGVEFAKKP--- 151
                            + G  +        + + V+ +  A ER E LG +        
Sbjct: 78  ---------------YINGGMMQRGEVTTPVVTVDVESIESALERIESLGGKTVTGRTPV 122

Query: 152 -DGGKLKGVAFIKDPDDYWIEIF 173
            + G     A+  D +   + ++
Sbjct: 123 GNMGF---AAYFTDSEGNVVGLW 142

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	185
3vw9_A	187	Lactoylglutathione lyase; glyoxalase, lyase-lyase	99.95
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	99.92
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	99.91
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	99.88
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	99.88
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	99.88
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	99.86
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	99.86
4hc5_A	133	Glyoxalase/bleomycin resistance protein/dioxygena;	99.85
2p25_A	126	Glyoxalase family protein; structural genomics, MC	99.85
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	99.85
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	99.84
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	99.84
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	99.84
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	99.83
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	99.83
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	99.83
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	99.83
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	99.83
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	99.83
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	99.82
3huh_A	152	Virulence protein STM3117; structural genomics, ny	99.82
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	99.81
3rri_A	135	Glyoxalase/bleomycin resistance protein/dioxygena;	99.81
1xrk_A	124	Bleomycin resistance protein; arm exchange, ligand	99.81
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	99.81
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	99.8
2i7r_A	118	Conserved domain protein; structural genomics cons	99.79
3ghj_A	141	Putative integron gene cassette protein; integron	99.79
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	99.79
2r6u_A	148	Uncharacterized protein; structural genomics, PSI-	99.79
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	99.79
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	99.79
3m2o_A	164	Glyoxalase/bleomycin resistance protein; unknown f	99.78
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	99.78
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	99.78
1nki_A	135	Probable fosfomycin resistance protein; potassium	99.78
4gym_A	149	Glyoxalase/bleomycin resistance protein/dioxygena;	99.78
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	99.78
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	99.78
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	99.78
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	99.77
3zi1_A	330	Glyoxalase domain-containing protein 4; isomerase;	99.77
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	99.77
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	99.77
1ecs_A	126	Bleomycin resistance protein; arm-exchange, antibi	99.76
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	99.76
1qto_A	122	Bleomycin-binding protein; arm-exchange, antibioti	99.76
3fcd_A	134	Lyase, ORF125EGC139; lactoylglutathione lyase, YEC	99.74
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	99.73
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	99.73
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	99.72
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	99.72
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	99.72
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	99.71
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	99.71
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	99.7
3zi1_A	330	Glyoxalase domain-containing protein 4; isomerase;	99.69
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	99.69
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	99.68
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	99.68
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	99.67
3bt3_A	148	Glyoxalase-related enzyme, ARAC type; VOC superfam	99.67
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	99.66
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	99.66
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	99.66
1xy7_A	166	Unknown protein; structural genomics, protein stru	99.65
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	99.65
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	99.65
4ghg_A	365	Homoprotocatechuate 2,3-dioxygenase; oxygen activa	99.65
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	99.64
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	99.64
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	99.64
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	99.64
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	99.63
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	99.63
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	99.63
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	99.63
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	99.61
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	99.61
2r5v_A	357	PCZA361.1; dioxygenase, non-heme iron, vancomycin,	99.61
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	99.6
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	99.58
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	99.57
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	99.57
2zw5_A	301	Bleomycin acetyltransferase; dimer, two domains; H	99.54
1u6l_A	149	Hypothetical protein; structural genomics, PSI, pr	99.53
4ghg_A	365	Homoprotocatechuate 2,3-dioxygenase; oxygen activa	99.49
1u7i_A	136	Hypothetical protein; structural genomics, PA1358,	99.48
1t47_A	381	4-hydroxyphenylpyruvate dioxygenase; triketone inh	99.47
1t47_A	381	4-hydroxyphenylpyruvate dioxygenase; triketone inh	99.45
2r5v_A	357	PCZA361.1; dioxygenase, non-heme iron, vancomycin,	99.42
1sqd_A	424	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.41
1cjx_A	357	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.34
1sqd_A	424	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.32
1sp8_A	418	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.31
1sp8_A	418	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.29
1tsj_A	139	Conserved hypothetical protein; structural genomic	99.29
3isq_A	393	4-hydroxyphenylpyruvate dioxygenase; tyrosine meta	99.27
3l20_A	172	Putative uncharacterized protein; hypothetical pro	99.21
3isq_A	393	4-hydroxyphenylpyruvate dioxygenase; tyrosine meta	99.21
3e0r_A	244	C3-degrading proteinase (CPPA protein); MCSG, PSI,	99.2
3oms_A	138	PHNB protein; structural genomics, PSI-2, protein	99.16
1cjx_A	357	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.12
1u69_A	163	Hypothetical protein; structural genomics, MSCG, p	98.22
3opy_B	941	6-phosphofructo-1-kinase beta-subunit; ATP binding	97.9
3p8a_A	274	Uncharacterized protein; mainly antiparallel beta	97.02
3e0r_A	244	C3-degrading proteinase (CPPA protein); MCSG, PSI,	96.69
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	96.64
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	95.23
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	94.84
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	94.61
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	93.92
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	93.85
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	93.34
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	93.26
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	93.2
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	92.81
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	92.45
3ghj_A	141	Putative integron gene cassette protein; integron	92.23
1k4n_A	192	Protein EC4020, protein YECM; structural genomics,	91.61
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	91.57
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	90.69
2p25_A	126	Glyoxalase family protein; structural genomics, MC	90.48
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	90.28
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	89.57
4hc5_A	133	Glyoxalase/bleomycin resistance protein/dioxygena;	89.56
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	88.75
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	88.24
3opy_A	989	6-phosphofructo-1-kinase alpha-subunit; ATP bindin	87.91
3p8a_A	274	Uncharacterized protein; mainly antiparallel beta	87.87
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	87.86
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	87.58
3vw9_A	187	Lactoylglutathione lyase; glyoxalase, lyase-lyase	87.44
3huh_A	152	Virulence protein STM3117; structural genomics, ny	87.3
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	87.14
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	86.27
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	86.07
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	85.99
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	85.88
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	84.99
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	83.66
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	83.39
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	82.46
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	82.15
2i7r_A	118	Conserved domain protein; structural genomics cons	81.73
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	81.42
3iuz_A	340	Putative glyoxalase superfamily protein; struct ge	81.31
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	80.74
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	80.33

>3vw9_A Lactoylglutathione lyase; glyoxalase, lyase-lyase inhibitor complex; HET: EPE HPJ; 1.47A {Homo sapiens} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* 2za0_A*

Probab=99.95  E-value=5.6e-28  Score=180.62  Aligned_cols=172  Identities=56%  Similarity=1.066  Sum_probs=132.1

Q ss_pred             CCCCCCCCCCCCCCCCCceeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceee
Q 029933            9 SPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVW   88 (185)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (185)
                      +++..++.+..+++.+..++++|++|.|+|++++++||+++|||++..+...+...+..++++.++....+.+...+..|
T Consensus        15 ~~~~~~~~~~~~~~~~~~~~l~Hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~   94 (187)
T 3vw9_A           15 TDEAALSCCSDADPSTKDFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAW   94 (187)
T ss_dssp             CHHHHHHTCCCCCGGGTTCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESCCGGGSCSSHHHHHHH
T ss_pred             chhHHHhhccCCCCccceeEEEEEEEEeCCHHHHHHHHHHhcCcEEeeccccCCCceeEEEecCCCcccccccccchhhh
Confidence            34445566666777788899999999999999999999999999999877666677888888876543333344445566


Q ss_pred             ecCCCcEEEEeecCCCCCCCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCEEeecCCCCccceEEEEECCCCc
Q 029933           89 TFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDY  168 (185)
Q Consensus        89 ~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~  168 (185)
                      ...+...++|...++....... ++..+.....++.||+|.|+|+++++++|+++|+++...+..+..++.+||+|||||
T Consensus        95 ~~~~~~~l~l~~~~~~~~~~~~-~~~~g~~~~~g~~hl~f~v~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~  173 (187)
T 3vw9_A           95 ALSRKATLELTHNWGTEDDETQ-SYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKGLAFIQDPDGY  173 (187)
T ss_dssp             HTTCSSEEEEEEETTGGGCTTC-CCCCSSSSSCBEEEEEEECSCHHHHHHHHHHTTCCEEECTTSSSSTTCEEEECTTCC
T ss_pred             cccCCceEEEEEecCCCCCCcc-ccccCCCCCCceeEEEEEECCHHHHHHHHHHCCCeEeeCCccCCcceEEEEECCCCC
Confidence            6666678999766544322211 244444455688999999999999999999999999998876666667899999999


Q ss_pred             EEEEeecCccccc
Q 029933          169 WIEIFDLKTIGKI  181 (185)
Q Consensus       169 ~iEl~~~~~~~~~  181 (185)
                      .|||+++...+++
T Consensus       174 ~iel~~~~~~~~~  186 (187)
T 3vw9_A          174 WIEILNPNKMATL  186 (187)
T ss_dssp             EEEEECGGGSGGG
T ss_pred             EEEEEEccccccC
Confidence            9999998876654

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A*

Probab=99.92  E-value=3.9e-24  Score=159.52  Aligned_cols=167  Identities=62%  Similarity=1.135  Sum_probs=112.7

Q ss_pred             CCCCCCCCCCCCCceeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCC
Q 029933           13 NPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK   92 (185)
Q Consensus        13 ~~~~~~~~~~~~~~~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (185)
                      .++.+..+.+.+..++++|++|.|+|++++++||+++|||++......++..+..++++.++....+.....+..|...+
T Consensus        16 ~~~~~~~~~~~~~~~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~   95 (184)
T 2za0_A           16 AFSCCSDPDPSTKDFLLQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAWTFSR   95 (184)
T ss_dssp             HHHTCCCCCGGGTTCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESCCGGGSCSSHHHHHHHHTTS
T ss_pred             hhcccCCcCCCccceeEEEEEEEeCCHHHHHHHHHHhcCCEEEEeccCCCCCceeEEecccccccCCcccchheeeecCC
Confidence            44555555555667799999999999999999999999999987654334455566666432111111111122333333


Q ss_pred             CcEEEEeecCCCCCCCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCEEeecCCCCccceEEEEECCCCcEEEE
Q 029933           93 PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEI  172 (185)
Q Consensus        93 ~~~l~l~~~~~~~~~~~~~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl  172 (185)
                      ...++|+........+.. ++..+.....++.||+|.|+|+++++++|+++|+++...+..+.+++.+||+|||||+|||
T Consensus        96 ~~~l~L~~~~~~~~~~~~-~~~~~~~~~~g~~hi~f~v~dvd~~~~~l~~~G~~~~~~p~~~~~~~~~~~~DPdG~~iel  174 (184)
T 2za0_A           96 KATLELTHNWGTEDDETQ-SYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKGLAFIQDPDGYWIEI  174 (184)
T ss_dssp             SSEEEEEEETTGGGCTTC-CCCCSSSSSCCEEEEEEECSCHHHHHHHHHHTTCCEEECTTSSSSTTCEEEECTTCCEEEE
T ss_pred             CceEEEEecCCCCCCccc-ccccCCCCCCCeeEEEEEeCCHHHHHHHHHHCCCeeecCCcCCCceeEEEEECCCCCEEEE
Confidence            568888765432111111 1222222224778999999999999999999999999888665555679999999999999


Q ss_pred             eecCcccc
Q 029933          173 FDLKTIGK  180 (185)
Q Consensus       173 ~~~~~~~~  180 (185)
                      ++.....+
T Consensus       175 ~~~~~~~~  182 (184)
T 2za0_A          175 LNPNKIAT  182 (184)
T ss_dssp             ECTTTGGG
T ss_pred             EecCcccc
Confidence            99877544

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila}

Probab=99.91  E-value=1.7e-24  Score=157.42  Aligned_cols=133  Identities=17%  Similarity=0.216  Sum_probs=89.2

Q ss_pred             CCceeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCC
Q 029933           24 TNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWG  103 (185)
Q Consensus        24 ~~~~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~  103 (185)
                      ...|+|+|+.|.|+|+++|++||+++|||++..+....+..  ...+..+...                ...+.+.....
T Consensus        22 ~~~Mri~~v~I~V~Dle~A~~FY~dvLGf~v~~d~~~~~~~--~~~~~~~~~~----------------~~~~l~~~~~~   83 (155)
T 4g6x_A           22 SNAMRIHLTNVFVDDQAKAESFYTGKLGFLVKADVPVGADR--WLTVVSPEAP----------------DGTQLLLEPSS   83 (155)
T ss_dssp             -CCCCCCEEEEEESCHHHHHHHHHHTTCCEEEEEEEETTEE--EEEEECTTCT----------------TSCEEEEEECC
T ss_pred             cCceEEEEEEEEeCCHHHHHHHHHHHhCCEEEEeecCCCce--EEEEeccCCC----------------cceEEEeccCC
Confidence            44569999999999999999999999999998775544433  2333222110                11222222111


Q ss_pred             CCCCCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCEEeecCCCCccceEEEEECCCCcEEEEeecCcc
Q 029933          104 TESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTI  178 (185)
Q Consensus       104 ~~~~~~~~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~~~  178 (185)
                      .....   +...+ ....+..|++|.|+|+++++++|+++|+++..+|.+..+++.+||+|||||+|||+|..++
T Consensus        84 ~~~~~---~~~~~-~~~~g~~~l~f~VdDvda~~~~l~~~Gv~~~~~p~~~~~g~~~~f~DPdGn~iel~q~~~d  154 (155)
T 4g6x_A           84 HAAVT---PFKEA-LVADGIPAASFAVDDIAAEYERLSALGVRFTQEPTDMGPVVTAILDDTCGNLIQLMQIAYD  154 (155)
T ss_dssp             STTHH---HHHHH-HHHTTCCSEEEEESCHHHHHHHHHHTTCCEEEEEEECSSCEEEEEECSSSCEEEEEEC---
T ss_pred             Ccccc---ccccc-cccCCceEEEeeechhhhhhhHHhcCCcEEeeCCEEcCCeEEEEEECCCCCEEEEEEECCC
Confidence            11000   00000 0112567999999999999999999999999888776667889999999999999997543

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A

Probab=99.88  E-value=2.3e-21  Score=136.45  Aligned_cols=126  Identities=40%  Similarity=0.719  Sum_probs=92.7

Q ss_pred             eeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCC
Q 029933           27 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  106 (185)
Q Consensus        27 ~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~  106 (185)
                      ++++|+.|.|+|++++++||+++|||++......++..+..+++..++..               ....+++........
T Consensus         1 m~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~l~l~~~~~~~~   65 (135)
T 1f9z_A            1 MRLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPET---------------EEAVIELTYNWGVDK   65 (135)
T ss_dssp             CCEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESSCTT---------------TSCEEEEEEETTCCC
T ss_pred             CcceEEEEEeCCHHHHHHHHHhccCcEEEEecccCCCceEEEEEecCCCC---------------CCcEEEEEEcCCCCc
Confidence            47999999999999999999999999998765444445556666654310               035677765433211


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCEEeecCCCCcc--ceEEEEECCCCcEEEEeecCc
Q 029933          107 DPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKL--KGVAFIKDPDDYWIEIFDLKT  177 (185)
Q Consensus       107 ~~~~~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~~~~~~--~~~~~~~DPdG~~iEl~~~~~  177 (185)
                            ...    ..++.|++|.|+|+++++++|+++|+++..+|.....  .+.+||+|||||.|||++...
T Consensus        66 ------~~~----~~~~~~~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~~~~  128 (135)
T 1f9z_A           66 ------YEL----GTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKD  128 (135)
T ss_dssp             ------CCC----CSSEEEEEEECSCHHHHHHHHHHTTCEEEEEEEECTTSCCEEEEEECTTSCEEEEEEC--
T ss_pred             ------ccC----CCCccEEEEEeCCHHHHHHHHHHCCCEEecCCccCCCCceeEEEEECCCCCEEEEEecCC
Confidence                  111    1267899999999999999999999999876643222  246899999999999999765

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans}

Probab=99.88  E-value=3.1e-21  Score=134.99  Aligned_cols=129  Identities=21%  Similarity=0.235  Sum_probs=91.0

Q ss_pred             eeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCC
Q 029933           27 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  106 (185)
Q Consensus        27 ~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~  106 (185)
                      .+++|++|.|+|++++++||+++|||++..+...++......++..+                   ...++|+.....++
T Consensus         4 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~-------------------~~~l~l~~~~~~~~   64 (134)
T 3l7t_A            4 KAVHHVALIVSDYDKSYEFYVNQLGFEVIRENHRPKRHDYKLDLKCG-------------------DIELEIFGNKLTDS   64 (134)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEETTTTEEEEEEEET-------------------TEEEEEEECCTTST
T ss_pred             eeEeEEEEEeCCHHHHHHHHHHhcCCEEEEEeecCCCcceEEEEecC-------------------CeEEEEEecccccc
Confidence            38999999999999999999999999998775544443334445432                   35788876322110


Q ss_pred             CCCCCCCCCCCC-CCCCceEEEEEeCCHHHHHHHHHhcCCEEeecCCCC-ccceEEEEECCCCcEEEEee
Q 029933          107 DPDFKGYHNGNS-EPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGG-KLKGVAFIKDPDDYWIEIFD  174 (185)
Q Consensus       107 ~~~~~~~~~~~~-~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~~~~-~~~~~~~~~DPdG~~iEl~~  174 (185)
                      .....+...... ...++.|++|.|+|+++++++|+++|+++...+... .+.+.+|++|||||.|||+|
T Consensus        65 ~~~~~~~~~~~~~~~~g~~~~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~e  134 (134)
T 3l7t_A           65 NYCAPPERISWPREACGLRHLAFYVEDVEASRQELIALGIRVEEVRYDDYTGKKMAFFFDPDGLPLELHE  134 (134)
T ss_dssp             TCCCCCCCCCSSSCCSEEEEEEEECSCHHHHHHHHHHHTCCCCCCEECTTSCCEEEEEECTTCCEEEEEC
T ss_pred             cccCCccccCCCCCCCCeEEEEEEECCHHHHHHHHHhCCCcccceeccCCCceEEEEEECCCCCEEEEeC
Confidence            000000000001 234778999999999999999999999987665443 33468999999999999986

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}

Probab=99.88  E-value=9.5e-22  Score=137.05  Aligned_cols=122  Identities=22%  Similarity=0.319  Sum_probs=91.7

Q ss_pred             ceeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCC
Q 029933           26 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE  105 (185)
Q Consensus        26 ~~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~  105 (185)
                      +++++|++|.|+|++++++||+++|||++......++..+..+++..++                  +..++|.......
T Consensus         1 gm~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~------------------~~~l~l~~~~~~~   62 (127)
T 3e5d_A            1 GMKIEHVALWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSFED------------------GARLEIMSRTDVT   62 (127)
T ss_dssp             -CCCCEEEEECSSHHHHHHHHHHHHCCEECCCEEEGGGTEEEEEEECSS------------------SCEEEEEEETTCC
T ss_pred             CCEEEEEEEEECCHHHHHHHHHHhcCCeeecccccCCCCccEEEEEcCC------------------CcEEEEEecCCCC
Confidence            4689999999999999999999999999987654334445566665432                  4578887654322


Q ss_pred             CCCCCCCCCCCCCCCCCceEEEEEeCC---HHHHHHHHHhcCCEEeecCCCCcc-ceEEEEECCCCcEEEEe
Q 029933          106 SDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGKL-KGVAFIKDPDDYWIEIF  173 (185)
Q Consensus       106 ~~~~~~~~~~~~~~~~g~~hi~~~v~d---v~~~~~~l~~~G~~~~~~~~~~~~-~~~~~~~DPdG~~iEl~  173 (185)
                      ..+    ..    ...++.|++|.|+|   +++++++|+++|+++...|..... .+.+||+|||||.|||+
T Consensus        63 ~~~----~~----~~~g~~hi~~~v~d~~~v~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~  126 (127)
T 3e5d_A           63 GKT----TG----ENLGWAHIAISTGTKEAVDELTEKLRQDGFAIAGEPRMTGDGYYESVVLDPEGNRIEIT  126 (127)
T ss_dssp             CCC----CS----SCSSCCCEEEECSSHHHHHHHHHHHHHTTCCEEEEEEECTTSCEEEEEECTTSCEEEEE
T ss_pred             CCC----Cc----CCCceEEEEEEcCCHHHHHHHHHHHHHcCCeEecCcccCCCCcEEEEEECCCCCEEEEe
Confidence            111    11    22367899999999   889999999999999887644333 35799999999999996

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A

Probab=99.86  E-value=2.5e-21  Score=136.30  Aligned_cols=126  Identities=20%  Similarity=0.205  Sum_probs=90.4

Q ss_pred             CceeEEEEEEEeCChHHHHHHHHHhcCCEEeeee-ecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCC
Q 029933           25 NGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRL-DFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWG  103 (185)
Q Consensus        25 ~~~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~  103 (185)
                      +.++++|++|.|+|++++++||+ +|||++..+. ..+..+....++..+                   ...++|+....
T Consensus         4 M~~~i~hv~i~v~Dl~~a~~FY~-~lG~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~l~l~~~~~   63 (133)
T 3hdp_A            4 MSLKVHHIGYAVKNIDSALKKFK-RLGYVEESEVVRDEVRKVYIQFVING-------------------GYRVELVAPDG   63 (133)
T ss_dssp             CCCCEEEEEEECSCHHHHHHHHH-HTTCEECSCCEEETTTTEEEEEEEET-------------------TEEEEEEEESS
T ss_pred             cceeeCEEEEEECCHHHHHHHHH-HcCCeeecceeccCCcceEEEEEeCC-------------------CEEEEEEecCC
Confidence            45689999999999999999999 9999987652 223334445555432                   45788876543


Q ss_pred             CCCCCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCEEeecCC--CC-ccceEEEEECCCCcEEEEeec
Q 029933          104 TESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPD--GG-KLKGVAFIKDPDDYWIEIFDL  175 (185)
Q Consensus       104 ~~~~~~~~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~~--~~-~~~~~~~~~DPdG~~iEl~~~  175 (185)
                      ...  ....+..  . ..+++||+|.|+|+++++++|+++|+++..+|.  .+ .+.+.+|++|||||+|||+|+
T Consensus        64 ~~~--~~~~~~~--~-~~g~~hiaf~v~di~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~dPdG~~iEl~e~  133 (133)
T 3hdp_A           64 EDS--PINKTIK--K-GSTPYHICYEVEDIQKSIEEMSQIGYTLFKKAEIAPAIDNRKVAFLFSTDIGLIELLEK  133 (133)
T ss_dssp             TTC--THHHHTT--T-SCEEEEEEEEESCHHHHHHHHTTTTEEEEEEEEEEGGGTTEEEEEEEETTTEEEEEEEC
T ss_pred             CCC--hHHHHHh--c-CCceEEEEEEcCCHHHHHHHHHHcCCccccCCeecccCCCceEEEEECCCceEEEEecC
Confidence            221  1000000  0 237789999999999999999999999987542  22 233679999999999999984

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}

Probab=99.86  E-value=5.8e-21  Score=137.41  Aligned_cols=129  Identities=19%  Similarity=0.162  Sum_probs=90.8

Q ss_pred             CCceeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecC--------CCceEEEeeccCCCCCCCCCCccceeeecCCCcE
Q 029933           24 TNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFP--------EMKFSLYFLGYEDTASAPADPVDRTVWTFGKPAT   95 (185)
Q Consensus        24 ~~~~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   95 (185)
                      .+-.+|+|++|.|+|++++++||+++|||++......+        ...  ..++..++                  +..
T Consensus        15 ~~~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~------------------~~~   74 (156)
T 3kol_A           15 GNLRKVHHIALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASGK--VANFITPD------------------GTI   74 (156)
T ss_dssp             TSSCCCCEEEEEESCHHHHHHHHTTTSCCEECCTTTSCTTTHHHHHTTS--EEEEECTT------------------SCE
T ss_pred             cccceEeEEEEEeCCHHHHHHHHHhhcCCEEEeecccCcchhcccCCCc--EEEEEeCC------------------CCE
Confidence            33448999999999999999999999999988732111        111  23333221                  357


Q ss_pred             EEEeecCCCCCCCCCCCCCCCCCCCCCceEEEEEeC--CHHHHHHHHHhcCCEEeecCCCCccceEEEEECCCCcEEEEe
Q 029933           96 IELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVD--DVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIF  173 (185)
Q Consensus        96 l~l~~~~~~~~~~~~~~~~~~~~~~~g~~hi~~~v~--dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~  173 (185)
                      ++|+......... .    .......+..|++|.|+  |+++++++|+++|+++...|.....++.+||+|||||.|||+
T Consensus        75 l~l~~~~~~~~~~-~----~~~~~~~~~~h~~~~v~~~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~DPdG~~iel~  149 (156)
T 3kol_A           75 LDLFGEPELSPPD-P----NPEKTFTRAYHLAFDIDPQLFDRAVTVIGENKIAIAHGPVTRPTGRGVYFYDPDGFMIEIR  149 (156)
T ss_dssp             EEEEECTTCCCSS-S----STTCCCSSCCEEEEECCGGGHHHHHHHHHHTTCCEEEEEEEC-CCEEEEEECTTSCEEEEE
T ss_pred             EEEEecCCCCcCC-C----CCCCCCCceEEEEEEecHHHHHHHHHHHHHCCCccccCceecCCccEEEEECCCCCEEEEE
Confidence            7887653322110 0    01112347789999999  999999999999999987665444456899999999999999


Q ss_pred             ecCc
Q 029933          174 DLKT  177 (185)
Q Consensus       174 ~~~~  177 (185)
                      +...
T Consensus       150 ~~~~  153 (156)
T 3kol_A          150 CDPE  153 (156)
T ss_dssp             ECCC
T ss_pred             ecCC
Confidence            8754

>4hc5_A Glyoxalase/bleomycin resistance protein/dioxygena; MCSG, GEBA genomes, structural genomics, midwest center for structural genomics; HET: MSE GOL; 1.45A {Sphaerobacter thermophilus}

Probab=99.85  E-value=7.8e-20  Score=128.08  Aligned_cols=121  Identities=18%  Similarity=0.297  Sum_probs=88.4

Q ss_pred             ceeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCC
Q 029933           26 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE  105 (185)
Q Consensus        26 ~~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~  105 (185)
                      ..+++|+.|.|+|++++++||+++|||++........ ......+..++.                 ...+.+.......
T Consensus        11 ~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~-~~~~~~~~~~~~-----------------~~~l~l~~~~~~~   72 (133)
T 4hc5_A           11 IAYVHSATIIVSDQEKALDFYVNTLGFEKVFDNQLDP-NMRFVTVVPPGA-----------------QTQVALGLPSWYE   72 (133)
T ss_dssp             CCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEET-TEEEEEEECTTC-----------------SCEEEEECGGGCS
T ss_pred             ccceeEEEEEECCHHHHHHHHHhCcCCcEeeecccCC-CceEEEEECCCC-----------------ceEEEEecCcccc
Confidence            3489999999999999999999999999988653222 122333332211                 3467775432110


Q ss_pred             CCCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCEEeecCCCCccc-eEEEEECCCCcEEEEee
Q 029933          106 SDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIFD  174 (185)
Q Consensus       106 ~~~~~~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~~~~~~~-~~~~~~DPdG~~iEl~~  174 (185)
                      .          ...+.+..||+|.|+|+++++++|+++|+++..+|....++ +.+||+|||||.|||+|
T Consensus        73 ~----------~~~~~~~~~~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DP~G~~~el~e  132 (133)
T 4hc5_A           73 D----------GRKPGGYTGISLITRDIDEAYKTLTERGVTFTKPPEMMPWGQRATWFSDPDGNQFFLVE  132 (133)
T ss_dssp             S----------CCCSCEEEEEEEEESCHHHHHHHHHHTTCEESSSCEECTTSCEEEEEECTTCEEEEEEE
T ss_pred             c----------ccCCCCeEEEEEEeCCHHHHHHHHHHCCCEeecCCCcCCCCCEEEEEECCCCCEEEEEe
Confidence            0          01123678999999999999999999999998777544444 78999999999999987

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis}

Probab=99.85  E-value=2.9e-20  Score=128.95  Aligned_cols=122  Identities=19%  Similarity=0.279  Sum_probs=85.4

Q ss_pred             eeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCC
Q 029933           27 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  106 (185)
Q Consensus        27 ~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~  106 (185)
                      .+++|++|.|+|++++++||+++|||++......++......++..+                   ...++|........
T Consensus         4 ~~i~hi~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~-------------------~~~l~l~~~~~~~~   64 (126)
T 2p25_A            4 KEIHHVAINASNYQATKNFYVEKLGFEVLRENHRPEKNDIKLDLKLG-------------------SQELEIFISDQFPA   64 (126)
T ss_dssp             SCCCCEEEEESCHHHHHHHHTTTTCCEEEEEEEEGGGTEEEEEEEET-------------------TEEEEEEECTTCCC
T ss_pred             cccceEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCcceEEEEecC-------------------CeEEEEEeccCCCC
Confidence            37899999999999999999999999988653222211112223322                   23677765432211


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCEEeecCCCC-ccceEEEEECCCCcEEEEee
Q 029933          107 DPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGG-KLKGVAFIKDPDDYWIEIFD  174 (185)
Q Consensus       107 ~~~~~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~~~~-~~~~~~~~~DPdG~~iEl~~  174 (185)
                      .+.   .    ....+..|++|.|+|+++++++|+++|+++...+... .+.+.+|++|||||.|||+|
T Consensus        65 ~~~---~----~~~~g~~~~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~e  126 (126)
T 2p25_A           65 RPS---Y----PEALGLRHLAFKVEHIEEVIAFLNEQGIETEPLRVDDFTGKKMTFFFDPDGLPLELHE  126 (126)
T ss_dssp             CCC---S----SCCSSCCCEEEECSCHHHHHHHHHHTTCCCCCCEECTTTCCEEEEEECTTCCEEEEEC
T ss_pred             CCC---C----CCCccceEEEEEeCCHHHHHHHHHHcCCccccccccCCCCcEEEEEECCCCCEEEeeC
Confidence            110   1    1223678999999999999999999999987655433 23367899999999999986

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis}

Probab=99.85  E-value=6.1e-21  Score=138.72  Aligned_cols=131  Identities=20%  Similarity=0.259  Sum_probs=91.4

Q ss_pred             CCCCCceeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCC--------------CceEEEeeccCCCCCCCCCCccce
Q 029933           21 DEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE--------------MKFSLYFLGYEDTASAPADPVDRT   86 (185)
Q Consensus        21 ~~~~~~~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~   86 (185)
                      ++++...+++|++|.|+|++++++||+++|||++......+.              ......++..              
T Consensus        12 ~~~~~~~~i~Hv~i~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~--------------   77 (159)
T 3gm5_A           12 KNILDMRNTVQIGIVVRDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAKLAFFEL--------------   77 (159)
T ss_dssp             SSCCCGGGCEEEEEECSCHHHHHHHHHHHTTCCCCCCEECCCHHHHCCEETTEECCCCEEEEEEEE--------------
T ss_pred             ccccccccccEEEEEeCCHHHHHHHHHHhhCCCCceEEecCCcccccceeecccccceEEEEEEec--------------
Confidence            334444589999999999999999999999999775433221              2233333332              


Q ss_pred             eeecCCCcEEEEeecCCCCCCCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCEEeecCCCCccceEEEEECCC
Q 029933           87 VWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPD  166 (185)
Q Consensus        87 ~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPd  166 (185)
                           +...++|+.......  ....+..  ....|++||||.|+|+++++++|+++|+++...+.. .+.+.+|+.|||
T Consensus        78 -----g~~~leL~~~~~~~~--~~~~~l~--~~~~g~~Hiaf~v~di~~~~~~l~~~G~~~~~~~~~-~g~~~~~~~dpd  147 (159)
T 3gm5_A           78 -----GPLQLELIEPDENPS--TWREFLD--KNGEGIHHIAFVVKDMDRKVEELYRKGMKVIQKGDF-EGGRYAYIDTLR  147 (159)
T ss_dssp             -----TTEEEEEEEECSSSC--HHHHHHH--HHCSEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEE-TTEEEEEESCHH
T ss_pred             -----CCEEEEEEEECCCCC--hhHHHhh--cCCceEEEEEEEcCCHHHHHHHHHHCCCcEeecccc-CCeeEEEEeccc
Confidence                 356788876532211  0000000  012378999999999999999999999999766532 235689999999


Q ss_pred             --CcEEEEeec
Q 029933          167 --DYWIEIFDL  175 (185)
Q Consensus       167 --G~~iEl~~~  175 (185)
                        |++|||+|+
T Consensus       148 ~~G~~iEl~e~  158 (159)
T 3gm5_A          148 ALKVMIELLEN  158 (159)
T ss_dssp             HHSSEEEEEEE
T ss_pred             cCcEEEEEEec
Confidence              999999986

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1

Probab=99.84  E-value=1.2e-19  Score=129.85  Aligned_cols=123  Identities=37%  Similarity=0.647  Sum_probs=90.0

Q ss_pred             eeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCC
Q 029933           27 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  106 (185)
Q Consensus        27 ~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~  106 (185)
                      .+++|+.|.|+|++++++||+++|||++......++..+..+++..++..               +...++|........
T Consensus         7 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~---------------~~~~l~l~~~~~~~~   71 (144)
T 2c21_A            7 RRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEM---------------SSTVLELTYNYGVTS   71 (144)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTT---------------TSCEEEEEEETTCCC
T ss_pred             ceeEEEEEEeCCHHHHHHHHHhcCCCEEEEeeecCCCCeEEEEEEcCCCC---------------CceEEEEEecCCCCC
Confidence            48999999999999999999999999998765433334555666654310               035777765533211


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCEEeecCCCCccceEEEEECCCCcEEEEeecCc
Q 029933          107 DPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKT  177 (185)
Q Consensus       107 ~~~~~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~~  177 (185)
                            ..    ...++.||+|.|+|+++++++|+++|+++...  .+ ....+||+|||||.|||++...
T Consensus        72 ------~~----~~~~~~h~~f~v~d~~~~~~~l~~~G~~~~~~--~g-~~~~~~~~DPdG~~iel~~~~~  129 (144)
T 2c21_A           72 ------YK----HDEAYGHIAIGVEDVKELVADMRKHDVPIDYE--DE-SGFMAFVVDPDGYYIELLNEKT  129 (144)
T ss_dssp             ------CC----CCSSEEEEEEEESCHHHHHHHHHHTTCCEEEE--CS-SSSEEEEECTTSCEEEEEEHHH
T ss_pred             ------CC----CCCCceEEEEEeCCHHHHHHHHHHCCCEEecc--CC-cEEEEEEECCCCCEEEEEEcCc
Confidence                  11    12367899999999999999999999998876  22 2223499999999999998654

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A*

Probab=99.84  E-value=1.5e-19  Score=126.63  Aligned_cols=119  Identities=19%  Similarity=0.264  Sum_probs=85.9

Q ss_pred             eeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCC
Q 029933           27 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  106 (185)
Q Consensus        27 ~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~  106 (185)
                      .+++|++|.|+|++++++||+++|||++....    ..+  .++..+                   ...+++........
T Consensus         9 ~~i~hi~l~v~D~~~a~~FY~~~lG~~~~~~~----~~~--~~~~~~-------------------~~~~~l~~~~~~~~   63 (133)
T 3ey7_A            9 SHLDHLVLTVADIPTTTNFYEKVLGMKAVSFG----AGR--IALEFG-------------------HQKINLHQLGNEFE   63 (133)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHHHHCCEEEEET----TTE--EEEEET-------------------TEEEEEEETTSCCS
T ss_pred             cccCEEEEEECCHHHHHHHHHHccCceEEEec----CCe--EEEEcC-------------------CEEEEEEcCCCCcc
Confidence            38999999999999999999999999998762    122  223322                   34666655422211


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEeCC-HHHHHHHHHhcCCEEeecCCCC----ccceEEEEECCCCcEEEEeecCc
Q 029933          107 DPDFKGYHNGNSEPRGFGHIGITVDD-VYKACERFERLGVEFAKKPDGG----KLKGVAFIKDPDDYWIEIFDLKT  177 (185)
Q Consensus       107 ~~~~~~~~~~~~~~~g~~hi~~~v~d-v~~~~~~l~~~G~~~~~~~~~~----~~~~~~~~~DPdG~~iEl~~~~~  177 (185)
                       +    .  ......+..|++|.|+| +++++++|+++|+++...|...    ...+.+|++|||||.|||++..+
T Consensus        64 -~----~--~~~~~~~~~~~~~~v~dd~~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~~~~  132 (133)
T 3ey7_A           64 -P----K--AQNVRVGSADLCFITDTVLSDAMKHVEDQGVTIMEGPVKRTGAQGAITSFYFRDPDGNLIEVSTYSN  132 (133)
T ss_dssp             -S----C--CTTCCTTCCEEEEECSSCHHHHHHHHHHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEEESCC
T ss_pred             -c----c--CCCCCCCccEEEEEeCcHHHHHHHHHHHCCCccccCCccccCCCCCeEEEEEECCCCCEEEEEecCC
Confidence             0    0  01122366899999997 9999999999999988765321    11268999999999999999764

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} SCOP: d.32.1.0

Probab=99.84  E-value=6.5e-20  Score=128.21  Aligned_cols=126  Identities=23%  Similarity=0.384  Sum_probs=88.9

Q ss_pred             eeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCC
Q 029933           27 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  106 (185)
Q Consensus        27 ~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~  106 (185)
                      .+++|++|.|+|++++++||+++|||++......++.....+++..+                   ...++++...+...
T Consensus         4 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~l~~~~~~~~   64 (134)
T 3rmu_A            4 GRLNHVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVNLG-------------------NTKMELLHPLGLDS   64 (134)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHTSCCEECCCEEEGGGTEEEEEEECS-------------------SSEEEEEEECSTTC
T ss_pred             ceeeeEEEEeCCHHHHHHHHHHhcCCEEeEeeecCCCCEEEEEEecC-------------------CEEEEEEecCCCCc
Confidence            48999999999999999999999999988765443334555666543                   35777776543221


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCEEeecC-CCCcc-ceEEEE--ECCCCcEEEEee
Q 029933          107 DPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP-DGGKL-KGVAFI--KDPDDYWIEIFD  174 (185)
Q Consensus       107 ~~~~~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~-~~~~~-~~~~~~--~DPdG~~iEl~~  174 (185)
                      .  ...+. ......++.||+|.|+|+++++++|+++|+++..++ ..... .+.+|+  +|||||.|||+|
T Consensus        65 ~--~~~~~-~~~~~~g~~hi~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~e  133 (134)
T 3rmu_A           65 P--IAGFL-QKNKAGGMHHICIEVDNINAAVMDLKKKKIRSLSEEVKIGAHGKPVIFLHPKDCGGVLVELEQ  133 (134)
T ss_dssp             T--THHHH-HHCTTCEEEEEEEEESCHHHHHHHHHHTTCTTBCCCCEECTTSSEEEEECSCSSCCSCEEEEE
T ss_pred             h--hhhhh-hccCCCCceEEEEEcCCHHHHHHHHHHcCCcccCCCcccCCCCceEEEEecCCCCcEEEEEEc
Confidence            0  00000 001123779999999999999999999999987654 22222 235565  899999999987

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans}

Probab=99.83  E-value=5.9e-20  Score=134.15  Aligned_cols=129  Identities=23%  Similarity=0.325  Sum_probs=92.4

Q ss_pred             eeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCC
Q 029933           27 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  106 (185)
Q Consensus        27 ~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~  106 (185)
                      .+++|++|.|+|++++++||+++|||++......++.+....++..+                   ...++|+.......
T Consensus         7 ~~i~Hv~l~V~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g-------------------~~~l~l~~~~~~~~   67 (161)
T 3oa4_A            7 NKLDHIGIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQGVKIAFLEIG-------------------ESKIELLEPLSEES   67 (161)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEEGGGTEEEEEEEET-------------------TEEEEEEEESSTTS
T ss_pred             CcCCEEEEEECCHHHHHHHHHHccCCeEeeeeccCCCCeEEEEEeCC-------------------CeEEEEEeECCCCC
Confidence            38999999999999999999999999988765444444555555542                   45788876533211


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCEEeec-CCCCccc-eEEEE--ECCCCcEEEEeecCcc
Q 029933          107 DPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKK-PDGGKLK-GVAFI--KDPDDYWIEIFDLKTI  178 (185)
Q Consensus       107 ~~~~~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~-~~~~~~~-~~~~~--~DPdG~~iEl~~~~~~  178 (185)
                        ....+..  ....++.||+|.|+|+++++++|+++|+++..+ +.....+ +.+|+  +|||||+|||++....
T Consensus        68 --~~~~~~~--~~~~g~~Hiaf~V~Did~~~~~l~~~G~~~~~~~~~~~~~g~~~~f~~~~DPdG~~iEl~~~~~~  139 (161)
T 3oa4_A           68 --PIAKFIQ--KRGEGIHHIAIGVKSIEERIQEVKENGVQMINDEPVPGARGAQVAFLHPRSARGVLYEFCEKKEQ  139 (161)
T ss_dssp             --HHHHHHH--HHCSEEEEEEEECSCHHHHHHHHHHTTCCBSCSSCEECGGGCEEEEBCGGGTTTCCEEEEECCCC
T ss_pred             --hHHHHhh--cCCCCeEEEEEEECCHHHHHHHHHHCCCEecccCcccCCCCcEEEEEeccCCCeEEEEEEecCCc
Confidence              0000000  011378999999999999999999999998876 5444333 45666  4999999999997763

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP}

Probab=99.83  E-value=1.2e-19  Score=128.50  Aligned_cols=123  Identities=18%  Similarity=0.226  Sum_probs=89.5

Q ss_pred             eeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCC
Q 029933           27 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  106 (185)
Q Consensus        27 ~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~  106 (185)
                      .+++|+.|.|+|++++++||+++|||++.......+..+..+++. +                   ...++|........
T Consensus         4 ~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~-~-------------------~~~l~l~~~~~~~~   63 (136)
T 2rk0_A            4 SGVSHVSLTVRDLDISCRWYTEILDWKELVRGRGDTTSFAHGVLP-G-------------------GLSIVLREHDGGGT   63 (136)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEECSSEEEEEEECT-T-------------------SCEEEEEEETTCSS
T ss_pred             CcccEEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCceEEEEEc-C-------------------CCEEEEEeCCCCcc
Confidence            479999999999999999999999999987654332234444444 2                   45788865533211


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEe---CCHHHHHHHHHhcCCEEeecCCCCccceEEEEECCCCcEEEEeecCc
Q 029933          107 DPDFKGYHNGNSEPRGFGHIGITV---DDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKT  177 (185)
Q Consensus       107 ~~~~~~~~~~~~~~~g~~hi~~~v---~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~~  177 (185)
                       +.   +.   ....+..|++|.|   +|+++++++|+++|+++.. +.....++.+||+|||||.|||++...
T Consensus        64 -~~---~~---~~~~g~~h~~f~v~~~~d~~~~~~~l~~~G~~~~~-~~~~~~g~~~~~~DPdG~~iel~~~~~  129 (136)
T 2rk0_A           64 -DL---FD---ETRPGLDHLSFSVESMTDLDVLEERLAKAGAAFTP-TQELPFGWILAFRDADNIALEAMLGRE  129 (136)
T ss_dssp             -SC---CC---TTSSEEEEEEEEESSHHHHHHHHHHHHHHTCCBCC-CEEETTEEEEEEECTTCCEEEEEEECT
T ss_pred             -cC---CC---CCCCCcceEEEEeCCHHHHHHHHHHHHHCCCcccC-ccccCCceEEEEECCCCCEEEEEEcCC
Confidence             11   10   1223678999999   8999999999999999764 333333478999999999999998654

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6

Probab=99.83  E-value=2.2e-19  Score=128.81  Aligned_cols=130  Identities=15%  Similarity=0.229  Sum_probs=90.2

Q ss_pred             eeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeec-----------CCCceEEEeeccCCCCCCCCCCccceeeecCCCcE
Q 029933           27 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDF-----------PEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPAT   95 (185)
Q Consensus        27 ~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   95 (185)
                      .+++|++|.|+|++++++||++ |||++......           +......+++..++                 ++..
T Consensus        10 ~~i~hv~l~v~D~~~a~~FY~~-lG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-----------------g~~~   71 (153)
T 1ss4_A           10 LRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPD-----------------GHSR   71 (153)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHH-HTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTT-----------------SSCE
T ss_pred             cceeeEEEEeCCHHHHHHHHHH-CCCEEEeeccCCcchhheeeCCCCCcEEEEEEECCC-----------------CCcE
Confidence            4899999999999999999999 99998865332           11233445554422                 1357


Q ss_pred             EEEeecCCCCCCCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCEEeecCCC-CccceEEEEECCCCcEEEEee
Q 029933           96 IELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDG-GKLKGVAFIKDPDDYWIEIFD  174 (185)
Q Consensus        96 l~l~~~~~~~~~~~~~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~~~-~~~~~~~~~~DPdG~~iEl~~  174 (185)
                      ++|+..........   .........++.||+|.|+|+++++++|+++|+++..++.. .++.+.+||+|||||.|||++
T Consensus        72 l~l~~~~~~~~~~~---~~~~~~~~~g~~hl~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~  148 (153)
T 1ss4_A           72 IELSRFLTPPTIAD---HRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYENSYRLCYIRGVEGILIGLAE  148 (153)
T ss_dssp             EEEEEEEESCCCCB---CTTCCSSSBEEEEEEEEESCHHHHHHHHHHTTCEESSCCEEETTTEEEEEEECGGGCEEEEEE
T ss_pred             EEEEEecCCCCccc---ccCCCCCCCceEEEEEEeCCHHHHHHHHHHCCCeecCCCcccCCceEEEEEECCCCCEEEEEe
Confidence            77765422211000   00001122367899999999999999999999999877643 233467899999999999998


Q ss_pred             cCc
Q 029933          175 LKT  177 (185)
Q Consensus       175 ~~~  177 (185)
                      ...
T Consensus       149 ~~~  151 (153)
T 1ss4_A          149 ELG  151 (153)
T ss_dssp             ECC
T ss_pred             ccC
Confidence            754

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A*

Probab=99.83  E-value=2.4e-19  Score=126.51  Aligned_cols=113  Identities=19%  Similarity=0.214  Sum_probs=84.3

Q ss_pred             eEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCC
Q 029933           28 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESD  107 (185)
Q Consensus        28 ~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~  107 (185)
                      +++|+.|.|+|++++++||+++|||++.....    .+.  .+..++                  ...+.+....  .. 
T Consensus        13 ~i~~v~l~v~D~~~s~~FY~~~lG~~~~~~~~----~~~--~~~~~~------------------~~~l~l~~~~--~~-   65 (132)
T 3sk2_A           13 TPNLQLVYVSNVERSTDFYRFIFKKEPVFVTP----RYV--AFPSSG------------------DALFAIWSGG--EE-   65 (132)
T ss_dssp             CCCEEEEECSCHHHHHHHHHHHHTCCCSEECS----SEE--EEECST------------------TCEEEEESSS--CC-
T ss_pred             eeeEEEEEECCHHHHHHHHHHHcCCeEEEcCC----CEE--EEEcCC------------------CcEEEEEeCC--CC-
Confidence            89999999999999999999999999877522    222  222111                  3466665432  11 


Q ss_pred             CCCCCCCCCCCCCCCceEEEEEeCC---HHHHHHHHHh---cCCEEeecCCCCccceEEEEECCCCcEEEEeec
Q 029933          108 PDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFER---LGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDL  175 (185)
Q Consensus       108 ~~~~~~~~~~~~~~g~~hi~~~v~d---v~~~~~~l~~---~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~  175 (185)
                           ..   ....+..|++|.|+|   +++++++|++   +|+++..+|....+++.+||+|||||.|||+++
T Consensus        66 -----~~---~~~~~~~~~~~~v~~~~dv~~~~~~l~~~~~~G~~~~~~p~~~~~g~~~~~~DPdGn~iel~~~  131 (132)
T 3sk2_A           66 -----PV---AEIPRFSEIGIMLPTGEDVDKLFNEWTKQKSHQIIVIKEPYTDVFGRTFLISDPDGHIIRVCPL  131 (132)
T ss_dssp             -----CC---TTSCCCEEEEEEESSHHHHHHHHHHHHHCSSSCCEEEEEEEEETTEEEEEEECTTCCEEEEEEC
T ss_pred             -----Cc---CCCCCcceEEEEeCCHHHHHHHHHHHHhhhcCCCEEeeCCcccCceEEEEEECCCCCEEEEEeC
Confidence                 10   111256899999986   9999999999   999998777554445789999999999999875

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8

Probab=99.83  E-value=2.4e-19  Score=127.48  Aligned_cols=122  Identities=13%  Similarity=0.119  Sum_probs=85.8

Q ss_pred             CceeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCC
Q 029933           25 NGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT  104 (185)
Q Consensus        25 ~~~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~  104 (185)
                      +.+.+.|++|.|+|++++++||+++|||++..+... ...+..++++.++.                 ...+++....+.
T Consensus         8 m~~~~~~i~l~v~Dl~~s~~FY~~~LG~~~~~~~~~-~~~~~~~~~~~~~~-----------------~~~l~l~~~~~~   69 (139)
T 1twu_A            8 FQAAQIRIARPTGQLDEIIRFYEEGLCLKRIGEFSQ-HNGYDGVMFGLPHA-----------------DYHLEFTQYEGG   69 (139)
T ss_dssp             CBCSCEEEEEECSCHHHHHHHHTTTSCCCEEEEEEE-ETTEEEEEEESSSS-----------------SEEEEEEEETTC
T ss_pred             CCcceeEEeeEeCCHHHHHHHHHhcCCcEEEEeccC-CCCeeEEEEecCCC-----------------ceEEEEeecCCC
Confidence            344678999999999999999999999998876432 23345566665331                 235666544322


Q ss_pred             CCCCCCCCCCCCCCCCCCceEEEEEeCCH---HHHHHHHHhcCCEEeec--CCCCccceEEEEECCCCcEEEEeecC
Q 029933          105 ESDPDFKGYHNGNSEPRGFGHIGITVDDV---YKACERFERLGVEFAKK--PDGGKLKGVAFIKDPDDYWIEIFDLK  176 (185)
Q Consensus       105 ~~~~~~~~~~~~~~~~~g~~hi~~~v~dv---~~~~~~l~~~G~~~~~~--~~~~~~~~~~~~~DPdG~~iEl~~~~  176 (185)
                      ..      ...+    .+..||+|.|+|+   ++++++|+++|+++...  +.....+  .||+|||||.|||++..
T Consensus        70 ~~------~~~~----~~~~hi~~~v~d~~~l~~~~~~l~~~G~~~~~~~~~~~~~~g--~~~~DPdG~~iel~~~~  134 (139)
T 1twu_A           70 ST------APVP----HPDSLLVFYVPNAVELAAITSKLKHMGYQEVESENPYWSNGG--VTIEDPDGWRIVFMNSK  134 (139)
T ss_dssp             CC------CCCC----CTTCEEEEECCCHHHHHHHHHHHHHTTCCEECCSSHHHHSSE--EEEECTTCCEEEEESSC
T ss_pred             CC------CCCC----CCccEEEEEeCCcchHHHHHHHHHHcCCcCcCCCCcccCCCC--eEEECCCCCEEEEEEcC
Confidence            11      1111    2568999999999   99999999999998732  2211222  37999999999999863

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A

Probab=99.83  E-value=1.9e-19  Score=128.43  Aligned_cols=134  Identities=16%  Similarity=0.292  Sum_probs=90.9

Q ss_pred             eeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCC
Q 029933           27 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  106 (185)
Q Consensus        27 ~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~  106 (185)
                      .+++|+.|.|+|++++++||+++|||++......++.+...+++..++...             ..+..++|+.......
T Consensus         8 ~~~~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~-------------~~~~~l~l~~~~~~~~   74 (148)
T 1jc4_A            8 ICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLT-------------EHMTQVQVMAPLNDES   74 (148)
T ss_dssp             SEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCC-------------TTCCEEEEEEESSTTS
T ss_pred             ceeeEEEEEeCCHHHHHHHHHHccCceeeecccCCCCCeEEEEEEcCCCCc-------------CcceEEEEeecCCCCC
Confidence            489999999999999999999999999987654333344455665433100             0025688876532211


Q ss_pred             CCCCCCC--CCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCEEe-ecCCCCccc-eEEEE--ECCCCcEEEEeecCc
Q 029933          107 DPDFKGY--HNGNSEPRGFGHIGITVDDVYKACERFERLGVEFA-KKPDGGKLK-GVAFI--KDPDDYWIEIFDLKT  177 (185)
Q Consensus       107 ~~~~~~~--~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~-~~~~~~~~~-~~~~~--~DPdG~~iEl~~~~~  177 (185)
                        ....+  ..+  ...++.||+|.|+|+++++++|+++|+++. ..|.....+ +.+|+  +|||||.|||++..+
T Consensus        75 --~~~~~~~~~~--~~~g~~h~~~~v~d~~~~~~~l~~~G~~~~~~~p~~~~~g~~~~~~~~~DPdG~~iel~~~~~  147 (148)
T 1jc4_A           75 --TVAKWLAKHN--GRAGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGGNRINFMHPKSGKGVLIELTQYPK  147 (148)
T ss_dssp             --HHHHHHHHTT--TCCEEEEEEEECSCHHHHHHHHHHHTCCBSCSSCEECSSSCEEEEBCGGGGTTSCEEEEECCC
T ss_pred             --hHHHHHHhCC--CCCceEEEEEECCCHHHHHHHHHHCCCeecCcCcccCCCceEEEEEeecCCCcEEEEEEecCC
Confidence              00000  011  013678999999999999999999999988 345433333 45666  899999999998754

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}

Probab=99.82  E-value=2.3e-19  Score=126.41  Aligned_cols=118  Identities=14%  Similarity=0.113  Sum_probs=80.3

Q ss_pred             ceeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCC
Q 029933           26 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE  105 (185)
Q Consensus        26 ~~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~  105 (185)
                      ...|+|+.|.|+|++++++||++ |||++...... ...+...... +                   ...+++...... 
T Consensus         4 ~~~i~hv~l~v~D~~~a~~FY~~-LG~~~~~~~~~-~~~~~~~~~~-~-------------------~~~l~l~~~~~~-   60 (128)
T 3g12_A            4 SLLITSITINTSHLQGMLGFYRI-IGFQFTASKVD-KGSEVHRAVH-N-------------------GVEFSLYSIQNP-   60 (128)
T ss_dssp             CEEEEEEEEEESCHHHHHHHHHH-HTCCCEEC------CCEEEEEE-T-------------------TEEEEEEECCCC-
T ss_pred             cceEEEEEEEcCCHHHHHHHHHH-CCCEEecccCC-CCCEEEEEeC-C-------------------CeEEEEEECCCC-
Confidence            45899999999999999999999 99998765211 1122221111 1                   345666332110 


Q ss_pred             CCCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCE-EeecCCCCccceEEEEECCCCcEEEEeecCc
Q 029933          106 SDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVE-FAKKPDGGKLKGVAFIKDPDDYWIEIFDLKT  177 (185)
Q Consensus       106 ~~~~~~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~-~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~~  177 (185)
                             .    ....+..|++|.|+|+++++++++++|++ +..+|....++..++|+|||||+|||++..+
T Consensus        61 -------~----~~~~~~~~l~f~v~dvd~~~~~l~~~G~~~~~~~p~~~~~G~~~~~~DPdGn~iel~~~~~  122 (128)
T 3g12_A           61 -------Q----RSQIPSLQLGFQITDLEKTVQELVKIPGAMCILDPTDMPDGKKAIVLDPDGHSIELCELEG  122 (128)
T ss_dssp             -------S----SCCCCSEEEEEEESCHHHHHHHHTTSTTCEEEEEEEECC-CEEEEEECTTCCEEEEEC---
T ss_pred             -------c----CCCCCceEEEEEeCCHHHHHHHHHHCCCceeccCceeCCCccEEEEECCCCCEEEEEEecc
Confidence                   1    11124468999999999999999999999 8776654444444999999999999999765

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygen virulence, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A

Probab=99.82  E-value=6.2e-19  Score=127.01  Aligned_cols=122  Identities=18%  Similarity=0.246  Sum_probs=84.6

Q ss_pred             eeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCC
Q 029933           27 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  106 (185)
Q Consensus        27 ~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~  106 (185)
                      .+++|++|.|+|++++++||+++|||++....   + .+  .++..+                   ...+++........
T Consensus        22 ~~l~hv~l~v~D~~~a~~FY~~vLG~~~~~~~---~-~~--~~l~~~-------------------~~~l~l~~~~~~~~   76 (152)
T 3huh_A           22 DRIDHLVLTVSDISTTIRFYEEVLGFSAVTFK---Q-NR--KALIFG-------------------AQKINLHQQEMEFE   76 (152)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHHTTCCEEEEET---T-TE--EEEEET-------------------TEEEEEEETTBCCS
T ss_pred             ceeeEEEEEeCCHHHHHHHHHhcCCCEEEEcc---C-Ce--EEEEeC-------------------CeEEEEeccCCcCC
Confidence            47999999999999999999999999998762   1 22  223322                   34566654322111


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEeC-CHHHHHHHHHhcCCEEeecCCC--Cc--cceEEEEECCCCcEEEEeecCcccc
Q 029933          107 DPDFKGYHNGNSEPRGFGHIGITVD-DVYKACERFERLGVEFAKKPDG--GK--LKGVAFIKDPDDYWIEIFDLKTIGK  180 (185)
Q Consensus       107 ~~~~~~~~~~~~~~~g~~hi~~~v~-dv~~~~~~l~~~G~~~~~~~~~--~~--~~~~~~~~DPdG~~iEl~~~~~~~~  180 (185)
                       +    .  ......+..|++|.++ |+++++++|+++|+++...|..  +.  ..+.+||+|||||.|||++..+-+.
T Consensus        77 -~----~--~~~~~~g~~hi~f~~~~dl~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdG~~iEl~~~~~~~~  148 (152)
T 3huh_A           77 -P----K--ASRPTPGSADLCFITSTPINDVVSEILQAGISIVEGPVERTGATGEIMSIYIRDPDGNLIEISQYVEGHH  148 (152)
T ss_dssp             -S----C--CSSCCTTCCEEEEEESSCHHHHHHHHHHTTCCCSEEEEEEEETTEEEEEEEEECTTCCEEEEEEC-----
T ss_pred             -C----c--CcCCCCCccEEEEEecCCHHHHHHHHHHCCCeEecCCccccCCCCcEEEEEEECCCCCEEEEEecccCcc
Confidence             0    0  0112236689999997 9999999999999998876532  11  1367999999999999999877543

>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp}

Probab=99.81  E-value=1.1e-18  Score=123.19  Aligned_cols=120  Identities=17%  Similarity=0.135  Sum_probs=84.6

Q ss_pred             eeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCC
Q 029933           27 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  106 (185)
Q Consensus        27 ~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~  106 (185)
                      ++++|++|.|+|++++++||+++|||++.....    .+  ..+...                   +..+.+........
T Consensus         8 ~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~----~~--~~~~~~-------------------g~~~~l~~~~~~~~   62 (135)
T 3rri_A            8 NDVFHLAIPARDLDEAYDFYVTKLGCKLARRYP----DR--ITLDFF-------------------GDQLVCHLSDRWDR   62 (135)
T ss_dssp             TSEEEEEEEESCHHHHHHHHTTTTCCEEEEEET----TE--EEEEET-------------------TEEEEEEECSCSCS
T ss_pred             CccceEEEEcCCHHHHHHHHHHhcCCEeeccCC----Cc--EEEEEe-------------------CCEEEEEEcCcccc
Confidence            489999999999999999999999999966521    22  222211                   12344433211110


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEeC---CHHHHHHHHHhcCCEEeecCCC---C--ccceEEEEECCCCcEEEEeecCcc
Q 029933          107 DPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDG---G--KLKGVAFIKDPDDYWIEIFDLKTI  178 (185)
Q Consensus       107 ~~~~~~~~~~~~~~~g~~hi~~~v~---dv~~~~~~l~~~G~~~~~~~~~---~--~~~~~~~~~DPdG~~iEl~~~~~~  178 (185)
                           +      ...+..|++|.+.   |+++++++|+++|+++..+|..   +  ...+.+||+|||||.|||++..+.
T Consensus        63 -----~------~~~~~~h~~~~~~~~~d~~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~~~~DPdGn~iel~~~~~~  131 (135)
T 3rri_A           63 -----E------VSMYPRHFGITFRDKKHFDNLYKLAKQRGIPFYHDLSRRFEGLIEEHETFFLIDPSNNLLEFKYYFDD  131 (135)
T ss_dssp             -----S------CCSSSCEEEEECSSHHHHHHHHHHHHHTTCCEEEEEEEESTTSTTCEEEEEEECTTCCEEEEEEESSG
T ss_pred             -----c------CCCCCCeEEEEEcChHhHHHHHHHHHHcCCceecCcccccCCCCCceEEEEEECCCCCEEEEEEECCh
Confidence                 1      1124579999996   5999999999999998765532   1  223579999999999999998877


Q ss_pred             cccc
Q 029933          179 GKIG  182 (185)
Q Consensus       179 ~~~~  182 (185)
                      ..+|
T Consensus       132 ~~~~  135 (135)
T 3rri_A          132 RMMY  135 (135)
T ss_dssp             GGGC
T ss_pred             hhcC
Confidence            6654

>1xrk_A Bleomycin resistance protein; arm exchange, ligand binding protein, thermostable mutant, antibiotic inhibitor; HET: BLM; 1.50A {Streptoalloteichus hindustanus} SCOP: d.32.1.2 PDB: 2zhp_A* 1byl_A

Probab=99.81  E-value=1.1e-18  Score=121.87  Aligned_cols=113  Identities=10%  Similarity=0.053  Sum_probs=83.5

Q ss_pred             ceeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCC
Q 029933           26 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE  105 (185)
Q Consensus        26 ~~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~  105 (185)
                      .++..|+.|.|+|++++++||+++|||++...    ...+  .++..+                   ...+.+...... 
T Consensus         3 ~~~~~~~~l~v~D~~~a~~FY~~~lG~~~~~~----~~~~--~~~~~~-------------------~~~l~l~~~~~~-   56 (124)
T 1xrk_A            3 KLTSAVPVLTARDVAEAVEFWTDRLGFSRVFV----EDDF--AGVVRD-------------------DVTLFISAVQDQ-   56 (124)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHTTCCEEEEE----CSSE--EEEEET-------------------TEEEEEEECSCT-
T ss_pred             cccceeEEEEcCCHHHHHHHHHHccCceEEec----CCCE--EEEEEC-------------------CEEEEEEcCCCC-
Confidence            45678999999999999999999999998875    1223  223321                   345666543211 


Q ss_pred             CCCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhc------CC--EEeecCCCCccceEEEEECCCCcEEEEeecCc
Q 029933          106 SDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERL------GV--EFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKT  177 (185)
Q Consensus       106 ~~~~~~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~------G~--~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~~  177 (185)
                            +.       .+..|++|.|+|+++++++|+++      |+  ++..+|....+++.+|++|||||.|||++...
T Consensus        57 ------~~-------~~~~~~~~~v~dv~~~~~~l~~~~~~~~~G~~~~~~~~~~~~~~g~~~~~~DPdG~~iel~~~~~  123 (124)
T 1xrk_A           57 ------VV-------PDNTQAWVWVRGLDELYAEWSEVVSTNFRDASGPAMTEIVEQPWGREFALRDPAGNCVHFVAEEQ  123 (124)
T ss_dssp             ------TT-------GGGCEEEEEEECHHHHHHHHTTTSBSCTTTCSSCEECCCEEETTEEEEEEECTTCCEEEEEEC--
T ss_pred             ------CC-------CCceEEEEEECCHHHHHHHHHHhcccccCCccccccCCceecCCCCEEEEECCCCCEEEEEEecC
Confidence                  00       13469999999999999999999      99  88777754444478999999999999998754

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str}

Probab=99.81  E-value=9.1e-19  Score=122.21  Aligned_cols=115  Identities=13%  Similarity=0.127  Sum_probs=84.1

Q ss_pred             eeEEEEEEEe--CChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCC
Q 029933           27 YFMQQTMFRI--KDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT  104 (185)
Q Consensus        27 ~~i~h~~l~v--~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~  104 (185)
                      .+++|++|.|  +|++++++||+++|||++..+....... ...++..+                   ...++|......
T Consensus         9 ~~i~hv~l~v~~~D~~~a~~FY~~~lG~~~~~~~~~~~~~-~~~~~~~~-------------------~~~l~l~~~~~~   68 (126)
T 2qqz_A            9 QGIDHVQVAAPVGCEEEARAFYGETIGMEEIPKPEELKKR-GGCWFKCG-------------------NQEIHIGVEQNF   68 (126)
T ss_dssp             EEEEEEEEEECTTTHHHHHHHHTTTTCCEEECCCGGGGGG-CCEEEEET-------------------TEEEEEEECTTC
T ss_pred             ceeeeEEEEcccccHHHHHHHHHhcCCCEEecCcccccCC-CceEEEeC-------------------CEEEEEEecCCC
Confidence            3799999999  8999999999999999987653210000 01223221                   345666543110


Q ss_pred             CCCCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCEEeecCCCCccceEEEEECCCCcEEEEeecC
Q 029933          105 ESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLK  176 (185)
Q Consensus       105 ~~~~~~~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~  176 (185)
                                    .+.+..|++|.|+|+++++++|+++|+++...+. .++.+.+||+|||||.|||+++.
T Consensus        69 --------------~~~~~~~~~f~v~d~~~~~~~l~~~G~~~~~~~~-~~g~~~~~~~DPdG~~iel~~~~  125 (126)
T 2qqz_A           69 --------------NPAKRAHPAFYVLKIDEFKQELIKQGIEVIDDHA-RPDVIRFYVSDPFGNRIEFMENK  125 (126)
T ss_dssp             --------------CCCSSSCEEEEETTHHHHHHHHHHTTCCCEEECS-STTEEEEEEECTTSCEEEEEEEC
T ss_pred             --------------CCCCceEEEEEcCCHHHHHHHHHHcCCCccCCCC-CCCeeEEEEECCCCCEEEEEeCC
Confidence                          0125689999999999999999999999887774 23456899999999999999864

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei}

Probab=99.80  E-value=2.9e-19  Score=128.58  Aligned_cols=113  Identities=19%  Similarity=0.240  Sum_probs=82.7

Q ss_pred             EEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCCCCC
Q 029933           31 QTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDF  110 (185)
Q Consensus        31 h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~  110 (185)
                      ++.|.|+|++++++||+++|||++..+...++..+....++                     .  ++++......     
T Consensus         9 ~i~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~---------------------~--~~l~~~~~~~-----   60 (144)
T 3r6a_A            9 LSRLYVADLNPALEFYEELLETPVAMRFEIPQTGVELAQIS---------------------T--ILLIAGSEEA-----   60 (144)
T ss_dssp             EEEEEESCHHHHHHHHHHHTTCCCCEECCCSCSSCEEEEET---------------------T--EEEEESCHHH-----
T ss_pred             EEEEEECCHHHHHHHHHHhcCCEEEEEeccCCccEEEEEec---------------------c--EEEecCCccc-----
Confidence            49999999999999999999999887644333333333322                     1  4444321110     


Q ss_pred             CCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCEEeecCCCCccceEEEEECCCCcEEEEeecCcc
Q 029933          111 KGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTI  178 (185)
Q Consensus       111 ~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~~~  178 (185)
                        .     .+.+..||+|.|+|+++++++|+++|+++..+|.....++.+||+|||||.|||++..+.
T Consensus        61 --~-----~~~~~~hl~f~V~d~d~~~~~l~~~G~~v~~~p~~~~~G~~~~~~DPdG~~iel~~~~~~  121 (144)
T 3r6a_A           61 --L-----KPFRNTQATFLVDSLDKFKTFLEENGAEIIRGPSKVPTGRNMTVRHSDGSVIEYVEHSKI  121 (144)
T ss_dssp             --H-----GGGGGCCEEEEESCHHHHHHHHHHTTCEEEEEEEEETTEEEEEEECTTSCEEEEEEECC-
T ss_pred             --C-----CCCcceEEEEEeCCHHHHHHHHHHcCCEEecCCccCCCceEEEEECCCCCEEEEEEcCCc
Confidence              0     011447999999999999999999999998876544445789999999999999998764

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2

Probab=99.79  E-value=1.4e-18  Score=119.86  Aligned_cols=113  Identities=14%  Similarity=0.153  Sum_probs=79.9

Q ss_pred             eeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCC
Q 029933           27 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  106 (185)
Q Consensus        27 ~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~  106 (185)
                      ++++|+.|.|+|++++++||+++|||++....  +  .+  .++..+                   ...+.+... ... 
T Consensus         4 m~i~~v~l~v~D~~~a~~FY~~~lG~~~~~~~--~--~~--~~~~~~-------------------~~~l~l~~~-~~~-   56 (118)
T 2i7r_A            4 MNLNQLDIIVSNVPQVCADLEHILDKKADYAN--D--GF--AQFTIG-------------------SHCLMLSQN-HLV-   56 (118)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHHHTSCCSEEE--T--TE--EEEEET-------------------TEEEEEESS-CSS-
T ss_pred             ceeeEEEEEeCCHHHHHHHHHHHhCCeeEEeC--C--CE--EEEEeC-------------------CeEEEEEcC-CCC-
Confidence            48999999999999999999999999987642  1  22  223322                   223433211 100 


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCEEeecCCCCc-cceEEEEECCCCcEEEEeec
Q 029933          107 DPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGK-LKGVAFIKDPDDYWIEIFDL  175 (185)
Q Consensus       107 ~~~~~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~~~~~-~~~~~~~~DPdG~~iEl~~~  175 (185)
                           +..   ....+ .|++|.|+|+++++++|+++|+++..+|.... +.+.+||+|||||.|||++.
T Consensus        57 -----~~~---~~~~~-~~~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~  117 (118)
T 2i7r_A           57 -----PLE---NFQSG-IIIHIEVEDVDQNYKRLNELGIKVLHGPTVTDWGTESLLVQGPAGLVLDFYRM  117 (118)
T ss_dssp             -----SCC---CCCSC-EEEEEECSCHHHHHHHHHHHTCCEEEEEEECTTSCEEEEEECGGGCEEEEEEC
T ss_pred             -----Ccc---cCCCe-EEEEEEECCHHHHHHHHHHCCCceecCCccccCccEEEEEECCCccEEEEEec
Confidence                 000   01113 48999999999999999999999877665433 33678999999999999975

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium}

Probab=99.79  E-value=1.9e-18  Score=123.49  Aligned_cols=111  Identities=14%  Similarity=0.183  Sum_probs=82.5

Q ss_pred             eeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCC
Q 029933           27 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  106 (185)
Q Consensus        27 ~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~  106 (185)
                      .+++|++|.|+|++++++||+++|||++.....  +..+..+.++.  .                 ...+++.....   
T Consensus        27 ~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~--~~~~~~~~~~~--~-----------------~~~l~l~~~~~---   82 (141)
T 3ghj_A           27 KGLFEVAVKVKNLEKSSQFYTEILGFEAGLLDS--ARRWNFLWVSG--R-----------------AGMVVLQEEKE---   82 (141)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHTSCCEEEEEET--TTTEEEEEETT--T-----------------TEEEEEEECCS---
T ss_pred             ceecEEEEEeCCHHHHHHHHHHhcCCEEEEecC--CCcEEEEEecC--C-----------------CcEEEEeccCC---
Confidence            369999999999999999999999999988742  22332333321  1                 35677764311   


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEeC--CHHHHHHHHHhcCCEEeecCCCC-ccceEEEEECCCCcEEEEee
Q 029933          107 DPDFKGYHNGNSEPRGFGHIGITVD--DVYKACERFERLGVEFAKKPDGG-KLKGVAFIKDPDDYWIEIFD  174 (185)
Q Consensus       107 ~~~~~~~~~~~~~~~g~~hi~~~v~--dv~~~~~~l~~~G~~~~~~~~~~-~~~~~~~~~DPdG~~iEl~~  174 (185)
                                   ..+..|++|.|+  |+++++++|+++|+++...+... ..++.+||+|||||.|||++
T Consensus        83 -------------~~~~~h~~~~v~~~dld~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~  140 (141)
T 3ghj_A           83 -------------NWQQQHFSFRVEKSEIEPLKKALESKGVSVHGPVNQEWMQAVSLYFADPNGHALEFTA  140 (141)
T ss_dssp             -------------SCCCCEEEEEECGGGHHHHHHHHHHTTCCCEEEEEEGGGTEEEEEEECTTCCEEEEEE
T ss_pred             -------------CCCCceEEEEEeHHHHHHHHHHHHHCCCeEeCCcccCCCCceEEEEECCCCCEEEEEE
Confidence                         115579999997  99999999999999988433222 23468999999999999986

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila}

Probab=99.79  E-value=1.6e-18  Score=125.19  Aligned_cols=119  Identities=18%  Similarity=0.210  Sum_probs=83.9

Q ss_pred             eeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCC
Q 029933           27 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  106 (185)
Q Consensus        27 ~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~  106 (185)
                      .+++|+.|.|+|++++++||+++|||++....    ..+  .++..++                  +..+.+........
T Consensus         5 ~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~----~~~--~~~~~~~------------------g~~l~l~~~~~~~~   60 (148)
T 3rhe_A            5 SDPNLVLFYVKNPAKSEEFYKNLLDTQPIESS----PTF--AMFVMKT------------------GLRLGLWAQEEIEP   60 (148)
T ss_dssp             --CEEEEEEESCHHHHHHHHHHHHTCCCSEEC----SSE--EEEECTT------------------SCEEEEEEGGGCSS
T ss_pred             ccccEEEEEeCCHHHHHHHHHHHcCCEEeccC----CCE--EEEEcCC------------------CcEEEEecCCcCCc
Confidence            37899999999999999999999999988762    122  2333211                  34666654322211


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEeCC---HHHHHHHHHhcCCEEeecCCCCccceEEEEECCCCcEEEEeecCcc
Q 029933          107 DPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTI  178 (185)
Q Consensus       107 ~~~~~~~~~~~~~~~g~~hi~~~v~d---v~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~~~  178 (185)
                            ..   ....+..||+|.|+|   +++++++|+++|+++..+|.....++.+||+|||||.|||++....
T Consensus        61 ------~~---~~~~~~~~l~f~v~d~~dvd~~~~~l~~~G~~i~~~p~~~~~G~~~~~~DPdG~~iel~~~~~~  126 (148)
T 3rhe_A           61 ------KA---HQTGGGMELSFQVNSNEMVDEIHRQWSDKEISIIQPPTQMDFGYTFVGVDPDEHRLRIFCLKRT  126 (148)
T ss_dssp             ------CC---C----CEEEEEECSCHHHHHHHHHHHHHTTCCEEEEEEEETTEEEEEEECTTCCEEEEEEEC--
T ss_pred             ------cc---cCCCCeEEEEEEcCCHHHHHHHHHHHHhCCCEEEeCCeecCCCcEEEEECCCCCEEEEEEcChh
Confidence                  00   111245799999987   9999999999999998776544445789999999999999997763

>2r6u_A Uncharacterized protein; structural genomics, PSI-2, RHA04853, MCSG, protein structur initiative, midwest center for structural genomics; 1.50A {Rhodococcus SP}

Probab=99.79  E-value=6e-19  Score=127.34  Aligned_cols=122  Identities=14%  Similarity=0.146  Sum_probs=81.6

Q ss_pred             eeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCC
Q 029933           27 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  106 (185)
Q Consensus        27 ~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~  106 (185)
                      .++.|+.|.|+|++++++||+++|||++...   ++..+.  ++..++...  .    ...+ ........+....    
T Consensus        24 ~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~---~~~~~~--~~~~~~~~~--~----l~~~-~~~~~~~~l~~~~----   87 (148)
T 2r6u_A           24 GRIVHFEIPFDDGDRARAFYRDAFGWAIAEI---PDMDYS--MVTTGPVGE--S----GMPD-EPGYINGGMMQRG----   87 (148)
T ss_dssp             CCEEEEEEEESSHHHHHHHHHHHHCCEEEEE---TTTTEE--EEECSCBCT--T----SSBC-SSSCBCEEEEESS----
T ss_pred             CceEEEEEEeCCHHHHHHHHHHccCcEEEEC---CCCCEE--EEEeCCcce--e----eccc-CCcccccceeecC----
Confidence            4899999999999999999999999998873   222332  333222100  0    0000 0000112222110    


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCEEeecCCCCc-cceEEEEECCCCcEEEEeecCc
Q 029933          107 DPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGK-LKGVAFIKDPDDYWIEIFDLKT  177 (185)
Q Consensus       107 ~~~~~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~~~~~-~~~~~~~~DPdG~~iEl~~~~~  177 (185)
                                  ...++ |++|.|+|+++++++|+++|+++..++.... +++.+||+|||||.|||++...
T Consensus        88 ------------~~~g~-~l~f~v~dld~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~DPdG~~iel~~~~~  146 (148)
T 2r6u_A           88 ------------EVTTP-VVTVDVESIESALERIESLGGKTVTGRTPVGNMGFAAYFTDSEGNVVGLWETAR  146 (148)
T ss_dssp             ------------SSCSC-EEEEECSCHHHHHHHHHHTTCEEEEEEEEETTTEEEEEEECTTSCEEEEEEECC
T ss_pred             ------------CCCeE-EEEEEcCCHHHHHHHHHHcCCeEecCCeecCCCEEEEEEECCCCCEEEEEecCC
Confidence                        00143 9999999999999999999999987664332 3478999999999999998754

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A

Probab=99.79  E-value=4.5e-18  Score=119.52  Aligned_cols=117  Identities=18%  Similarity=0.199  Sum_probs=83.6

Q ss_pred             eeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEE---EeeccCCCCCCCCCCccceeeecCCCcEEEEeecCC
Q 029933           27 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSL---YFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWG  103 (185)
Q Consensus        27 ~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~  103 (185)
                      .+++|+.|.|+|++++++||+++|||++.....  +..+..   .++..                   +...+++.....
T Consensus         3 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~--~~~~~~~~~~~~~~-------------------~~~~l~l~~~~~   61 (133)
T 2p7o_A            3 SGLSHITLIVKDLNKTTAFLQNIFNAEEIYSSG--DKTFSLSKEKFFLI-------------------AGLWICIMEGDS   61 (133)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHHHHCCEECC-------CCCSSCEEEEEE-------------------TTEEEEEEECSS
T ss_pred             ceEEEEEEEcCCHHHHHHHHHHhcCCEEeeecC--CcccccCCceEEEe-------------------CCEEEEEecCCC
Confidence            479999999999999999999999999876532  111100   01211                   134566654211


Q ss_pred             CCCCCCCCCCCCCCCCCCCceEEEEEeC--CHHHHHHHHHhcCCEEeecCCCC-ccceEEEEECCCCcEEEEeecCcc
Q 029933          104 TESDPDFKGYHNGNSEPRGFGHIGITVD--DVYKACERFERLGVEFAKKPDGG-KLKGVAFIKDPDDYWIEIFDLKTI  178 (185)
Q Consensus       104 ~~~~~~~~~~~~~~~~~~g~~hi~~~v~--dv~~~~~~l~~~G~~~~~~~~~~-~~~~~~~~~DPdG~~iEl~~~~~~  178 (185)
                      .         .     ..+..|++|.|+  |+++++++|+++|+++...+... +.++.+|++|||||.|||++....
T Consensus        62 ~---------~-----~~~~~h~~~~v~~~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~  125 (133)
T 2p7o_A           62 L---------Q-----ERTYNHIAFQIQSEEVDEYTERIKALGVEMKPERPRVQGEGRSIYFYDFDNHLFELHAGTLE  125 (133)
T ss_dssp             C---------C-----CCCSCEEEEECCGGGHHHHHHHHHHHTCCEECCCCCCTTCCCEEEEECSSSCEEEEECSSCC
T ss_pred             C---------C-----CCCeeEEEEEcCHHHHHHHHHHHHHCCCcccCCCccCCCCeeEEEEECCCCCEEEEEcCChH
Confidence            0         0     126689999994  99999999999999998876542 345679999999999999997653

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens}

Probab=99.79  E-value=4.1e-18  Score=122.41  Aligned_cols=135  Identities=18%  Similarity=0.198  Sum_probs=85.5

Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCceeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCc
Q 029933            4 SEPKESPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPV   83 (185)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (185)
                      +..+++.++|.++..     ++-.+|+|+.|.|+|++++++||+++|||++....   + .+  .++..+          
T Consensus         8 ~~~~~~~~~n~~m~~-----m~i~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~---~-~~--~~l~~g----------   66 (147)
T 3zw5_A            8 SSGVDLGTENLYFQS-----MLIRRLDHIVMTVKSIKDTTMFYSKILGMEVMTFK---E-DR--KALCFG----------   66 (147)
T ss_dssp             --------CHHHHHH-----TSCEEEEEEEEEESCHHHHHHHHHHHHCCEEEEET---T-TE--EEEEET----------
T ss_pred             cccccccccceeecc-----eecccccEEEEEeCCHHHHHHHHHHhcCCEEEecC---C-Cc--eEEEEC----------
Confidence            344556666666521     22348999999999999999999999999998652   2 22  222222          


Q ss_pred             cceeeecCCCcEEEEeecCCCCCCCCCCCCCCCCCCCCCceEEEEEeC-CHHHHHHHHHhcCCEEeecCCC--C--ccce
Q 029933           84 DRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVD-DVYKACERFERLGVEFAKKPDG--G--KLKG  158 (185)
Q Consensus        84 ~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~g~~hi~~~v~-dv~~~~~~l~~~G~~~~~~~~~--~--~~~~  158 (185)
                               ...+.+........ +.   .  . ....+..|++|.+. |+++++++|+++|+++...|..  +  ...+
T Consensus        67 ---------~~~l~l~~~~~~~~-~~---~--~-~~~~g~~~~~~~~~~dl~~~~~~l~~~G~~~~~~p~~~~~~~g~~~  130 (147)
T 3zw5_A           67 ---------DQKFNLHEVGKEFE-PK---A--A-HPVPGSLDICLITEVPLEEMIQHLKACDVPIEEGPVPRTGAKGPIM  130 (147)
T ss_dssp             ---------TEEEEEEETTSCCS-SC---C--S-SCCTTCCEEEEECSSCHHHHHHHHHHTTCCCCEEEEEEEETTEEEE
T ss_pred             ---------CcEEEEEEcCCCcC-cc---c--C-CCCCCCceEEEEeccCHHHHHHHHHHcCCceeeCcccccCCCCceE
Confidence                     23566654322111 00   0  0 11125578999886 9999999999999998765422  1  1224


Q ss_pred             EEEEECCCCcEEEEeec
Q 029933          159 VAFIKDPDDYWIEIFDL  175 (185)
Q Consensus       159 ~~~~~DPdG~~iEl~~~  175 (185)
                      .+||+|||||+|||.++
T Consensus       131 ~~~~~DPdGn~iEl~~y  147 (147)
T 3zw5_A          131 SIYFRDPDRNLIEVSNY  147 (147)
T ss_dssp             EEEEECTTCCEEEEEEC
T ss_pred             EEEEECCCCCEEEEecC
Confidence            78999999999999874

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2

Probab=99.78  E-value=1.9e-18  Score=119.14  Aligned_cols=110  Identities=16%  Similarity=0.240  Sum_probs=78.3

Q ss_pred             eEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCC
Q 029933           28 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESD  107 (185)
Q Consensus        28 ~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~  107 (185)
                      ++ |+.|.|+|++++++||+++|||++...   .+  + ..++..++.                ....+.+...  ..  
T Consensus         8 ~i-~v~l~v~d~~~a~~FY~~~lG~~~~~~---~~--~-~~~~~~~~~----------------~~~~l~l~~~--~~--   60 (119)
T 2pjs_A            8 RV-VANIATPEPARAQAFYGDILGMPVAMD---HG--W-IVTHASPLE----------------AHAQVSFARE--GG--   60 (119)
T ss_dssp             EE-EEEEECSCGGGGHHHHTTTTCCCEEEE---CS--S-EEEEEEEEE----------------EEEEEEEESS--SB--
T ss_pred             EE-EEEEEcCCHHHHHHHHHHhcCCEEEec---CC--E-EEEEecCCC----------------CcEEEEEEcC--CC--
Confidence            46 999999999999999999999998764   11  2 122222110                0123444321  10  


Q ss_pred             CCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCEEeecCCCCcc-ceEEEEECCCCcEEEEeec
Q 029933          108 PDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKL-KGVAFIKDPDDYWIEIFDL  175 (185)
Q Consensus       108 ~~~~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~~~~~~-~~~~~~~DPdG~~iEl~~~  175 (185)
                                 ...+..|++|.|+|+++++++|+++|+++..++..... .+.+|++|||||.|||++.
T Consensus        61 -----------~~~~~~~~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~  118 (119)
T 2pjs_A           61 -----------SGTDVPDLSIEVDNFDEVHARILKAGLPIEYGPVTEAWGVQRLFLRDPFGKLINILSH  118 (119)
T ss_dssp             -----------TTBCCCSEEEEESCHHHHHHHHHHTTCCCSEEEEECTTSCEEEEEECTTSCEEEEEEC
T ss_pred             -----------CCCceeEEEEEECCHHHHHHHHHHCCCccccCCccCCCccEEEEEECCCCCEEEEEec
Confidence                       01144799999999999999999999998876644333 3689999999999999985

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP}

Probab=99.78  E-value=6.8e-18  Score=119.50  Aligned_cols=120  Identities=14%  Similarity=0.092  Sum_probs=83.8

Q ss_pred             EEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCCCC
Q 029933           30 QQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPD  109 (185)
Q Consensus        30 ~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~  109 (185)
                      ..+.|.|+|++++++||+++|||++..+...+ +......+..+                   ...+.+........   
T Consensus         4 ~~i~l~v~D~~~a~~FY~~~lG~~~~~~~~~~-g~~~~~~l~~~-------------------~~~l~l~~~~~~~~---   60 (137)
T 3itw_A            4 MVVELAYTDPDRAVDWLVRVFGFRLLLRQPAI-GTIRHADLDTG-------------------GGIVMVRRTGEPYT---   60 (137)
T ss_dssp             CEEEEEESCHHHHHHHHHHHHCCEEEEEESSS-SSCSEEEEECS-------------------SSEEEEEETTCCSS---
T ss_pred             EEEEEEECCHHHHHHHHHHccCCEEEEEecCC-CcEEEEEEecC-------------------CeEEEEEecCCCcC---
Confidence            36899999999999999999999998765432 22223333322                   34666654321110   


Q ss_pred             CCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCEEeecCCCCcc-ceEEEEECCCCcEEEEeecCc
Q 029933          110 FKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKL-KGVAFIKDPDDYWIEIFDLKT  177 (185)
Q Consensus       110 ~~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~~~~~~-~~~~~~~DPdG~~iEl~~~~~  177 (185)
                         .  ......++.|++|.|+|+++++++|+++|+++..++....+ .+.+||+|||||.|||++...
T Consensus        61 ---~--~~~~~~~~~~~~~~v~dv~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~~  124 (137)
T 3itw_A           61 ---V--SCAGGHTCKQVIVWVSDVDEHFMRSTAAGADIVQPLQDKPWGLRQYLVRDLEGHLWEFTRHLR  124 (137)
T ss_dssp             ---C--EECCCCCCCEEEEEESCHHHHHHHHHHTTCEEEEEEEEETTTEEEEEEECSSSCEEEEEECC-
T ss_pred             ---c--cCCCCCcEEEEEEEeCCHHHHHHHHHHcCCeeccCccccCCCcEEEEEECCCCCEEEEEEEcC
Confidence               0  00111132399999999999999999999999877754333 368999999999999999754

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A

Probab=99.78  E-value=1e-17  Score=118.41  Aligned_cols=112  Identities=18%  Similarity=0.219  Sum_probs=84.7

Q ss_pred             eeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCC
Q 029933           27 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  106 (185)
Q Consensus        27 ~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~  106 (185)
                      .+++|+.|.|+|++++++||+++|||++.....  .    ..++..+                   ...+++......  
T Consensus         3 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~--~----~~~~~~~-------------------~~~l~l~~~~~~--   55 (135)
T 1nki_A            3 TGLNHLTLAVADLPASIAFYRDLLGFRLEARWD--Q----GAYLELG-------------------SLWLCLSREPQY--   55 (135)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET--T----EEEEEET-------------------TEEEEEEECTTC--
T ss_pred             ceEeEEEEEeCCHHHHHHHHHHhcCCEEEEcCC--C----ceEEecC-------------------CEEEEEEeCCCC--
Confidence            379999999999999999999999999887531  2    1233322                   335666543110  


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEeC--CHHHHHHHHHhcCCEEeecCCCCccceEEEEECCCCcEEEEeecCc
Q 029933          107 DPDFKGYHNGNSEPRGFGHIGITVD--DVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKT  177 (185)
Q Consensus       107 ~~~~~~~~~~~~~~~g~~hi~~~v~--dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~~  177 (185)
                                .....+..|++|.|+  |+++++++|+++|+++..++..  .++.+|++|||||.|||++...
T Consensus        56 ----------~~~~~~~~h~~~~v~~~d~~~~~~~l~~~G~~~~~~~~~--~~~~~~~~DPdG~~iel~~~~~  116 (135)
T 1nki_A           56 ----------GGPAADYTHYAFGIAAADFARFAAQLRAHGVREWKQNRS--EGDSFYFLDPDGHRLEAHVGDL  116 (135)
T ss_dssp             ----------CCCCSSSCEEEEEECHHHHHHHHHHHHHTTCCEEECCCS--SSCEEEEECTTCCEEEEESCCH
T ss_pred             ----------CCCCCCcceEEEEccHHHHHHHHHHHHHCCCceecCCCC--CeEEEEEECCCCCEEEEEECCc
Confidence                      011226689999998  9999999999999999887654  4467999999999999998765

>4gym_A Glyoxalase/bleomycin resistance protein/dioxygena; PSI-biology, midwest center for structural genomics, MCSG, oxidoreductase; HET: MSE; 1.56A {Conexibacter woesei}

Probab=99.78  E-value=1.2e-18  Score=125.33  Aligned_cols=124  Identities=11%  Similarity=0.068  Sum_probs=79.2

Q ss_pred             eEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCC
Q 029933           28 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESD  107 (185)
Q Consensus        28 ~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~  107 (185)
                      ||.||+|.|+|+++|++||+++ |+.......  +..........                    ...+.+.........
T Consensus         9 rl~~V~L~V~Dl~~s~~FY~~l-g~~~~~~~~--~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~   65 (149)
T 4gym_A            9 RLTFVNLPVADVAASQAFFGTL-GFEFNPKFT--DESCACMVVSE--------------------QAFVMLIDRARFADF   65 (149)
T ss_dssp             CCEEEEEEESCHHHHHHHHHHT-TCEECGGGC--BTTEEEEEEET--------------------TEEEEEEEHHHHGGG
T ss_pred             cEEEEEEEeCCHHHHHHHHHHh-CCCcceeec--CCceeEEeecC--------------------cceEeeecccccccc
Confidence            8999999999999999999885 554444322  22222222221                    122333221000000


Q ss_pred             CCCCCCCCCCCCCCCceEEEEEeC---CHHHHHHHHHhcCCEEeecCCCCccceEEEEECCCCcEEEEeecCc
Q 029933          108 PDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKT  177 (185)
Q Consensus       108 ~~~~~~~~~~~~~~g~~hi~~~v~---dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~~  177 (185)
                      .   ..........+..||+|.|+   ++++++++++++|+.+..+|.+..+++.+||+|||||+|||+....
T Consensus        66 ~---~~~~~~~~~~~~~~~a~~v~~~~~vd~~~~~~~~~g~~~~~~p~~~~~~~~~~f~DPDGn~iEi~~~~p  135 (149)
T 4gym_A           66 T---SKPIADATATTEAIVCVSAIDRDDVDRFADTALGAGGTVARDPMDYGFMYGRSFHDLDGHLWEVMWMSA  135 (149)
T ss_dssp             C---SSCBCCTTTCBSCEEEEECSSHHHHHHHHHHHHHTTCEECSCCEECSSEEEEEEECTTCCEEEEEEECT
T ss_pred             c---cccCCCCCCCCeeEEEEEeccHHHHHHHHHHHHhcCceeeccccccCCEEEEEEEcCCCCEEEEEEECh
Confidence            0   00001111224569999996   5888999999999999998877666788999999999999986443

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2

Probab=99.78  E-value=1.1e-17  Score=119.06  Aligned_cols=115  Identities=19%  Similarity=0.265  Sum_probs=85.4

Q ss_pred             eeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCC
Q 029933           27 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  106 (185)
Q Consensus        27 ~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~  106 (185)
                      .+++|++|.|+|++++++||+++|||++.....  .    ..++..+                   ...++|........
T Consensus         3 ~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~--~----~~~~~~~-------------------~~~l~l~~~~~~~~   57 (141)
T 1npb_A            3 QSLNHLTLAVSDLQKSVTFWHELLGLTLHARWN--T----GAYLTCG-------------------DLWVCLSYDEARQY   57 (141)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHTTSCCEEEEEET--T----EEEEEET-------------------TEEEEEEECTTCCC
T ss_pred             ceEEEEEEEeCCHHHHHHHHHhccCCEEEeecC--C----cEEEEEC-------------------CEEEEEEECCCCCC
Confidence            379999999999999999999999999887632  1    1233322                   33566654321110


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEeC--CHHHHHHHHHhcCCEEeecCCCCccceEEEEECCCCcEEEEeecCc
Q 029933          107 DPDFKGYHNGNSEPRGFGHIGITVD--DVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKT  177 (185)
Q Consensus       107 ~~~~~~~~~~~~~~~g~~hi~~~v~--dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~~  177 (185)
                            ..   ....+..|++|.|+  |+++++++|+++|+++...+..  .++.+||+|||||.|||++...
T Consensus        58 ------~~---~~~~~~~hi~~~v~~~d~~~~~~~l~~~G~~~~~~~~~--~~~~~~~~DPdG~~iel~~~~~  119 (141)
T 1npb_A           58 ------VP---PQESDYTHYAFTVAEEDFEPLSQRLEQAGVTIWKQNKS--EGASFYFLDPDGHKLELHVGSL  119 (141)
T ss_dssp             ------CC---GGGSCSCEEEEECCHHHHHHHHHHHHHTTCCEEECCCS--SSEEEEEECTTCCEEEEEECCH
T ss_pred             ------CC---CCCCCceEEEEEeCHHHHHHHHHHHHHCCCeEeccCCC--ceeEEEEECCCCCEEEEEECch
Confidence                  00   11236689999997  9999999999999999887653  4568999999999999999765

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2

Probab=99.78  E-value=7.9e-18  Score=119.53  Aligned_cols=116  Identities=17%  Similarity=0.213  Sum_probs=82.9

Q ss_pred             eeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEE---EeeccCCCCCCCCCCccceeeecCCCcEEEEeecCC
Q 029933           27 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSL---YFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWG  103 (185)
Q Consensus        27 ~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~  103 (185)
                      .+++|+.|.|+|++++++||+++|||++.....  +..+..   .++..                   +...+++.....
T Consensus         3 ~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~--~~~~~~~~~~~~~~-------------------g~~~l~l~~~~~   61 (139)
T 1r9c_A            3 EGLSHMTFIVRDLERMTRILEGVFDAREVYASD--TEQFSLSREKFFLI-------------------GDIWVAIMQGEK   61 (139)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHHHHCCEEEEEGG--GSTTCCSCEEEEEE-------------------TTEEEEEEECCC
T ss_pred             ceEEEEEEEeCCHHHHHHHHHHhhCCEEeecCC--CccccccceEEEEE-------------------CCEEEEEEeCCC
Confidence            379999999999999999999999999887532  111100   01221                   134666654211


Q ss_pred             CCCCCCCCCCCCCCCCCCCceEEEEEeC--CHHHHHHHHHhcCCEEeecCCCC-ccceEEEEECCCCcEEEEeecCc
Q 029933          104 TESDPDFKGYHNGNSEPRGFGHIGITVD--DVYKACERFERLGVEFAKKPDGG-KLKGVAFIKDPDDYWIEIFDLKT  177 (185)
Q Consensus       104 ~~~~~~~~~~~~~~~~~~g~~hi~~~v~--dv~~~~~~l~~~G~~~~~~~~~~-~~~~~~~~~DPdG~~iEl~~~~~  177 (185)
                        .     +       ..+..|++|.|+  |+++++++|+++|+++...+... +.++.+||+|||||.|||++..-
T Consensus        62 --~-----~-------~~~~~h~~~~v~~~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~  124 (139)
T 1r9c_A           62 --L-----A-------ERSYNHIAFKIDDADFDRYAERVGKLGLDMRPPRPRVEGEGRSIYFYDDDNHMFELHTGTL  124 (139)
T ss_dssp             --C-----S-------SCCSCEEEEECCGGGHHHHHHHHHHHTCCBCCCCC-----CCEEEEECTTSCEEEEECCCH
T ss_pred             --C-----C-------CCCeeEEEEEcCHHHHHHHHHHHHHCCCcccCCcccCCCCeEEEEEECCCCCEEEEEeCCh
Confidence              0     0       126689999999  99999999999999988765432 34568999999999999998543

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens}

Probab=99.78  E-value=3.4e-18  Score=122.71  Aligned_cols=116  Identities=19%  Similarity=0.331  Sum_probs=84.7

Q ss_pred             eEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCC
Q 029933           28 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESD  107 (185)
Q Consensus        28 ~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~  107 (185)
                      ++.|+.|.|+|++++++||+++|||++....  +  .+  .++..++                  ...++|........ 
T Consensus        25 ~l~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~--~--~~--~~~~~~~------------------~~~l~l~~~~~~~~-   79 (144)
T 2kjz_A           25 HPDFTILYVDNPPASTQFYKALLGVDPVESS--P--TF--SLFVLAN------------------GMKLGLWSRHTVEP-   79 (144)
T ss_dssp             CCCEEEEEESCHHHHHHHHHHHHTCCCSEEE--T--TE--EEEECTT------------------SCEEEEEETTSCSS-
T ss_pred             ceeEEEEEeCCHHHHHHHHHHccCCEeccCC--C--Ce--EEEEcCC------------------CcEEEEEeCCCCCC-
Confidence            7899999999999999999999999988753  1  22  2222221                  24677754322111 


Q ss_pred             CCCCCCCCCCCCCCCceEEEEEeC---CHHHHHHHHHhcCCEEeecCCCCccceEEEEECCCCcEEEEeecC
Q 029933          108 PDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLK  176 (185)
Q Consensus       108 ~~~~~~~~~~~~~~g~~hi~~~v~---dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~  176 (185)
                           ..   ....+..||+|.|+   |+++++++|+++|+++..+|....+++.+||+|||||.|||+++.
T Consensus        80 -----~~---~~~~~~~hl~f~v~d~~dv~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~DPdG~~iel~~~~  143 (144)
T 2kjz_A           80 -----KA---SVTGGGGELAFRVENDAQVDETFAGWKASGVAMLQQPAKMEFGYTFTAADPDSHRLRVYAFA  143 (144)
T ss_dssp             -----CC---CCSSSSCEEEEECSSHHHHHHHHHHHHHTTCCCCSCCEEETTEEEEEECCTTCCEEEEEEEC
T ss_pred             -----cc---CCCCCceEEEEEeCCHHHHHHHHHHHHHCCCeEecCceecCCceEEEEECCCCCEEEEEecC
Confidence                 10   11236689999997   589999999999999887765444457899999999999999864

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens}

Probab=99.77  E-value=2e-18  Score=125.90  Aligned_cols=124  Identities=19%  Similarity=0.205  Sum_probs=85.9

Q ss_pred             eEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCC
Q 029933           28 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESD  107 (185)
Q Consensus        28 ~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~  107 (185)
                      +++|++|.|+|++++++||+++|||++.....  + .  ..++..+                   ...+.+.........
T Consensus         8 ~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~--~-~--~~~~~~g-------------------~~~~~l~~~~~~~~~   63 (160)
T 3r4q_A            8 AIMETALYADDLDAAEAFYRDVFGLEMVLKLP--G-Q--LVFFKCG-------------------RQMLLLFDPQESSRA   63 (160)
T ss_dssp             CEEEEEEECSCHHHHHHHHHHHSCCEEEEEET--T-T--EEEEEET-------------------TEEEEEECHHHHTCC
T ss_pred             cccEEEEEeCCHHHHHHHHHHhcCCEEEEecC--C-c--EEEEeCC-------------------CEEEEEEecCCccCc
Confidence            79999999999999999999999999987632  1 1  2233322                   345555432111000


Q ss_pred             CCCCCCCCCCCCCCCceEEEEEe---CCHHHHHHHHHhcCCEEeecCCCCccceEEEEECCCCcEEEEeecCc
Q 029933          108 PDFKGYHNGNSEPRGFGHIGITV---DDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKT  177 (185)
Q Consensus       108 ~~~~~~~~~~~~~~g~~hi~~~v---~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~~  177 (185)
                      ...  .........++.||+|.|   +|+++++++|+++|+++...+....+++.+||+|||||.|||+++..
T Consensus        64 ~~~--~~~~~~~~~g~~hi~f~V~~~~dld~~~~~l~~~G~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~~  134 (160)
T 3r4q_A           64 DAN--NPIPRHGAVGQGHFCFYADDKAEVDEWKTRFEALEIPVEHYHRWPNGSYSVYIRDPAGNSVEVGEGKL  134 (160)
T ss_dssp             CTT--CCSCCCEEEEECEEEEEESSHHHHHHHHHHHHTTTCCCCEEEECTTSCEEEEEECTTCCEEEEEEGGG
T ss_pred             ccc--CCCCcCCCcceeEEEEEeCCHHHHHHHHHHHHHCCCEEeccccccCCcEEEEEECCCCCEEEEEeCCC
Confidence            000  000001122568999999   89999999999999998766544344678999999999999999765

>3zi1_A Glyoxalase domain-containing protein 4; isomerase; 1.90A {Homo sapiens}

Probab=99.77  E-value=6.2e-18  Score=137.18  Aligned_cols=121  Identities=22%  Similarity=0.359  Sum_probs=92.0

Q ss_pred             CCceeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecC-----------CCceEEEeeccCCCCCCCCCCccceeeecCC
Q 029933           24 TNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFP-----------EMKFSLYFLGYEDTASAPADPVDRTVWTFGK   92 (185)
Q Consensus        24 ~~~~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (185)
                      +..+++.|++|.|+|++++++||+++|||++..+....           +.+|..++++++...               .
T Consensus        23 M~~~~i~Hv~l~V~Dle~s~~FY~~vLGl~~~~~~~~~~~~~a~~~g~~~~~~~~~~l~~~~~~---------------~   87 (330)
T 3zi1_A           23 MAARRALHFVFKVGNRFQTARFYRDVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMVGFGPED---------------D   87 (330)
T ss_dssp             CSCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEEC---------CCCSCEEEEEEESSCTT---------------T
T ss_pred             cccceeeEEEEEeCCHHHHHHHHHHhcCCeEEEEeecchhhhhhccCCcCCceEEEEEecCCCC---------------C
Confidence            34469999999999999999999999999998775544           456777777765321               1


Q ss_pred             CcEEEEeecCCCCCCCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCEEeecCCCCccceEEEEECCCCcEEEE
Q 029933           93 PATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEI  172 (185)
Q Consensus        93 ~~~l~l~~~~~~~~~~~~~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl  172 (185)
                      ...++|....+...      +..+.    ++.||+|.|+|+   +++++++|+++...+.     ..+||+|||||.|||
T Consensus        88 ~~~leL~~~~~~~~------~~~~~----g~~hiaf~V~d~---~~~l~~~G~~~~~~~~-----~~~~~~DPdG~~iel  149 (330)
T 3zi1_A           88 HFVAELTYNYGVGD------YKLGN----DFMGITLASSQA---VSNARKLEWPLTEVAE-----GVFETEAPGGYKFYL  149 (330)
T ss_dssp             CCEEEEEEETTCCC------CCBCS----SEEEEEEECHHH---HHHHHHHTCCCEEEET-----TEEEEECTTSCEEEE
T ss_pred             ccEEEEeccCCCCc------cccCC----CeeEEEEECchH---HHHHHHcCCceeccCC-----ceEEEECCCCCEEEE
Confidence            46788876654321      22222    789999999987   6778899999887652     258999999999999


Q ss_pred             eecCc
Q 029933          173 FDLKT  177 (185)
Q Consensus       173 ~~~~~  177 (185)
                      ++...
T Consensus       150 ~~~~~  154 (330)
T 3zi1_A          150 QNRSL  154 (330)
T ss_dssp             ESSCC
T ss_pred             EecCC
Confidence            99753

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2

Probab=99.77  E-value=3.7e-18  Score=116.79  Aligned_cols=108  Identities=15%  Similarity=0.220  Sum_probs=79.7

Q ss_pred             eeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCC
Q 029933           27 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  106 (185)
Q Consensus        27 ~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~  106 (185)
                      ++++|+.|.|+|++++++||+++|||++....   +..+  .++..++                  +..+.+......  
T Consensus         2 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~---~~~~--~~~~~~~------------------~~~l~l~~~~~~--   56 (113)
T 1xqa_A            2 MGIKHLNLTVADVVAAREFLEKYFGLTCSGTR---GNAF--AVMRDND------------------GFILTLMKGKEV--   56 (113)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHHHCCEEEEEE---TTTE--EEEECTT------------------CCEEEEEECSSC--
T ss_pred             CeeEEEEEEeCCHHHHHHHHHHhCCCEEeccC---CCcE--EEEEcCC------------------CcEEEEEeCCCC--
Confidence            47899999999999999999999999988652   1222  3443321                  345666543110  


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEe---CCHHHHHHHHHhcCCEEeecCCCCccceEEEEECCCCcEEEEe
Q 029933          107 DPDFKGYHNGNSEPRGFGHIGITV---DDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIF  173 (185)
Q Consensus       107 ~~~~~~~~~~~~~~~g~~hi~~~v---~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~  173 (185)
                           +       ..+..|++|.|   +|+++++++|+++|+++.. |.... ++.+|++|||||.|||+
T Consensus        57 -----~-------~~~~~~~~~~v~~~~d~~~~~~~l~~~G~~~~~-p~~~~-~~~~~~~DPdG~~iel~  112 (113)
T 1xqa_A           57 -----Q-------YPKTFHVGFPQESEEQVDKINQRLKEDGFLVEP-PKHAH-AYTFYVEAPGGFTIEVM  112 (113)
T ss_dssp             -----C-------CCTTCCEEEECSSHHHHHHHHHHHHHTTCCCCC-CEEC--CEEEEEEETTTEEEEEE
T ss_pred             -----C-------CCceeEEEEEcCCHHHHHHHHHHHHHCCCEEec-CcCCC-cEEEEEECCCCcEEEEe
Confidence                 0       12568999999   8899999999999999754 43323 57899999999999996

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi}

Probab=99.77  E-value=2.4e-18  Score=123.97  Aligned_cols=122  Identities=17%  Similarity=0.114  Sum_probs=86.3

Q ss_pred             eeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCC
Q 029933           27 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  106 (185)
Q Consensus        27 ~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~  106 (185)
                      .++.|+.|.|+|++++++||+++|||++....    ..+  .++..+                   ...++|........
T Consensus         4 ~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~----~~~--~~~~~~-------------------~~~l~l~~~~~~~~   58 (150)
T 3bqx_A            4 QQVAVITLGIGDLEASARFYGEGFGWAPVFRN----PEI--IFYQMN-------------------GFVLATWLVQNLQE   58 (150)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHTSCCCCSEEC----SSE--EEEECS-------------------SSEEEEEEHHHHHH
T ss_pred             cceEEEEEEcCCHHHHHHHHHHhcCCEeecCC----CCE--EEEEcC-------------------CEEEEEEecccccc
Confidence            47899999999999999999999999987752    122  333322                   34677764321100


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEe---CCHHHHHHHHHhcCCEEeecCCCCc-cceEEEEECCCCcEEEEeecCcc
Q 029933          107 DPDFKGYHNGNSEPRGFGHIGITV---DDVYKACERFERLGVEFAKKPDGGK-LKGVAFIKDPDDYWIEIFDLKTI  178 (185)
Q Consensus       107 ~~~~~~~~~~~~~~~g~~hi~~~v---~dv~~~~~~l~~~G~~~~~~~~~~~-~~~~~~~~DPdG~~iEl~~~~~~  178 (185)
                      ...   ...  ....+..|++|.|   +|+++++++|+++|+++..+|.... +.+.+||+|||||.|||++...+
T Consensus        59 ~~~---~~~--~~~~~~~~l~f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~~~  129 (150)
T 3bqx_A           59 DVG---VAV--TSRPGSMALAHNVRAETEVAPLMERLVAAGGQLLRPADAPPHGGLRGYVADPDGHIWEIAFNPVW  129 (150)
T ss_dssp             HHS---SCC--CSSCCSCEEEEECSSGGGHHHHHHHHHHTTCEEEEEEECCTTSSEEEEEECTTCCEEEEEECTTS
T ss_pred             ccC---CCC--CCCCCeEEEEEEeCCHHHHHHHHHHHHHCCCEEecCCcccCCCCEEEEEECCCCCEEEEEeCCCc
Confidence            000   000  0012567999999   8999999999999999987764433 33689999999999999987553

>1ecs_A Bleomycin resistance protein; arm-exchange, antibiotic inhibitor; HET: PG4; 1.70A {Klebsiella pneumoniae} SCOP: d.32.1.2 PDB: 1ewj_A* 1niq_B* 1mh6_A

Probab=99.76  E-value=2.4e-17  Score=115.24  Aligned_cols=111  Identities=16%  Similarity=0.271  Sum_probs=80.6

Q ss_pred             EEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCCC
Q 029933           29 MQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDP  108 (185)
Q Consensus        29 i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~  108 (185)
                      ..++.|.|+|++++++||++ |||++...    +..+  .++..+                   ...+++....+..   
T Consensus         4 ~~~~~l~v~D~~~a~~FY~~-LG~~~~~~----~~~~--~~~~~~-------------------~~~l~l~~~~~~~---   54 (126)
T 1ecs_A            4 QATPNLPSRDFDSTAAFYER-LGFGIVFR----DAGW--MILQRG-------------------DLMLEFFAHPGLD---   54 (126)
T ss_dssp             EEEEEEEESCHHHHHHHHHT-TTCEEEEE----CSSE--EEEEET-------------------TEEEEEEECTTCC---
T ss_pred             cEEEEEEeCCHHHHHHHHHH-CCCEEEec----CCCE--EEEEeC-------------------CEEEEEEeCCCCC---
Confidence            46899999999999999998 99998865    2233  223322                   3456665432210   


Q ss_pred             CCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCEE-------eecCCCCcc-ceEEEEECCCCcEEEEeecCcc
Q 029933          109 DFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEF-------AKKPDGGKL-KGVAFIKDPDDYWIEIFDLKTI  178 (185)
Q Consensus       109 ~~~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~-------~~~~~~~~~-~~~~~~~DPdG~~iEl~~~~~~  178 (185)
                         +       ..+..|++|.|+|+++++++|+++|+++       ..+|....+ .+.+|++|||||.|||++....
T Consensus        55 ---~-------~~~~~~~~~~v~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~~~  122 (126)
T 1ecs_A           55 ---P-------LASWFSCCLRLDDLAEFYRQCKSVGIQETSSGYPRIHAPELQGWGGTMAALVDPDGTLLRLIQNELL  122 (126)
T ss_dssp             ---G-------GGCCCEEEEEESCHHHHHHHHHHTTCCBCSSSSSEEEEEEECTTSSEEEEEECTTSCEEEEEECCC-
T ss_pred             ---C-------CCcceEEEEEECCHHHHHHHHHHCCCccccccCccccCCcccCcccEEEEEECCCCCEEEEecchhh
Confidence               0       1245799999999999999999999984       555543333 3689999999999999997663

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A*

Probab=99.76  E-value=9.2e-18  Score=119.04  Aligned_cols=123  Identities=19%  Similarity=0.203  Sum_probs=84.6

Q ss_pred             eeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCC-
Q 029933           27 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE-  105 (185)
Q Consensus        27 ~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~-  105 (185)
                      +++.|+.|.|+|++++++||++ |||++.....  ...+..  +..++                  ...+.+....... 
T Consensus         3 ~~l~hv~l~v~D~~~a~~FY~~-LG~~~~~~~~--~~~~~~--~~~~~------------------~~~l~l~~~~~~~~   59 (138)
T 2a4x_A            3 ARISLFAVVVEDMAKSLEFYRK-LGVEIPAEAD--SAPHTE--AVLDG------------------GIRLAWDTVETVRS   59 (138)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHT-TTCCCCGGGG--GCSEEE--EECTT------------------SCEEEEEEHHHHHH
T ss_pred             ceeeEEEEEECCHHHHHHHHHH-cCCcEEecCC--CCceEE--EEcCC------------------CeEEEEecCccchh
Confidence            4899999999999999999998 9999876532  222222  22111                  3466665421100 


Q ss_pred             CCCCCCCCCCCCCCCCCceEEEEEeC---CHHHHHHHHHhcCCEEeecCCCCcc-ceEEEEECCCCcEEEEeecCc
Q 029933          106 SDPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDGGKL-KGVAFIKDPDDYWIEIFDLKT  177 (185)
Q Consensus       106 ~~~~~~~~~~~~~~~~g~~hi~~~v~---dv~~~~~~l~~~G~~~~~~~~~~~~-~~~~~~~DPdG~~iEl~~~~~  177 (185)
                      ..+... .    ....+..|++|.|+   |+++++++|+++|+++..+|..... .+.+||+|||||.|||++...
T Consensus        60 ~~~~~~-~----~~~~~~~~l~f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~~  130 (138)
T 2a4x_A           60 YDPEWQ-A----PTGGHRFAIAFEFPDTASVDKKYAELVDAGYEGHLKPWNAVWGQRYAIVKDPDGNVVDLFAPLP  130 (138)
T ss_dssp             HCTTCC-C----CBSSCSEEEEEECSSHHHHHHHHHHHHHTTCCEEEEEEEETTTEEEEEEECTTCCEEEEEEECT
T ss_pred             hCcccC-C----CCCCCeEEEEEEeCCHHHHHHHHHHHHHCCCceeeCCcccCCCcEEEEEECCCCCEEEEEeCCc
Confidence            000000 0    11236689999999   9999999999999999877654333 367999999999999998653

>1qto_A Bleomycin-binding protein; arm-exchange, antibiotic inhibitor; 1.50A {Streptomyces verticillus} SCOP: d.32.1.2 PDB: 1jie_A* 1jif_A

Probab=99.76  E-value=5.8e-18  Score=117.84  Aligned_cols=109  Identities=11%  Similarity=0.041  Sum_probs=80.3

Q ss_pred             eEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCC
Q 029933           28 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESD  107 (185)
Q Consensus        28 ~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~  107 (185)
                      +..++.|.|+|++++++||+++|||++...    ...+  .++..+                   ...+.+......   
T Consensus         5 ~~~~~~l~v~D~~~a~~FY~~~LG~~~~~~----~~~~--~~~~~~-------------------~~~l~l~~~~~~---   56 (122)
T 1qto_A            5 LGAVPVLTAVDVPANVSFWVDTLGFEKDFG----DRDF--AGVRRG-------------------DIRLHISRTEHQ---   56 (122)
T ss_dssp             CCCCCEEEESSHHHHHHHHHHTTCCEEEEE----CSSE--EEEEET-------------------TEEEEEEECSCH---
T ss_pred             cceeEEEEcCCHHHHHHHHHhccCcEEeeC----CCCE--EEEEEC-------------------CEEEEEEcCCCC---
Confidence            445789999999999999999999998865    1223  223321                   345666532110   


Q ss_pred             CCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhc------CC--EEeecCCCCccceEEEEECCCCcEEEEeec
Q 029933          108 PDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERL------GV--EFAKKPDGGKLKGVAFIKDPDDYWIEIFDL  175 (185)
Q Consensus       108 ~~~~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~------G~--~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~  175 (185)
                          +.       ....|++|.|+|+++++++|+++      |+  ++..++....+++.+|++|||||.|||+++
T Consensus        57 ----~~-------~~~~~~~~~v~dvd~~~~~l~~~~~~~~~G~~~~~~~~~~~~~~g~~~~~~DPdG~~iel~~~  121 (122)
T 1qto_A           57 ----IV-------ADNTSAWIEVTDPDALHEEWARAVSTDYADTSGPAMTPVGESPAGREFAVRDPAGNCVHFTAG  121 (122)
T ss_dssp             ----HH-------HTTCEEEEEESCHHHHHHHHTTTSCSCTTCTTSCEECCCEEETTEEEEEEECTTSCEEEEEEC
T ss_pred             ----CC-------CCceEEEEEECCHHHHHHHHHhhccccccCccccccCCCcCCCCCcEEEEECCCCCEEEEecC
Confidence                00       12369999999999999999999      99  887776544444789999999999999985

>3fcd_A Lyase, ORF125EGC139; lactoylglutathione lyase, YECM, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.92A {Uncultured bacterium} SCOP: d.32.1.0

Probab=99.74  E-value=3.8e-17  Score=115.53  Aligned_cols=116  Identities=14%  Similarity=0.161  Sum_probs=79.3

Q ss_pred             eeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCC
Q 029933           27 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  106 (185)
Q Consensus        27 ~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~  106 (185)
                      +.-.++.|.|+|++++++||+++|||++.....  .  +  .++..+                   ...+++........
T Consensus         6 ~~~~~~~l~v~D~~~a~~FY~~~LG~~~~~~~~--~--~--~~l~~~-------------------~~~l~l~~~~~~~~   60 (134)
T 3fcd_A            6 IHQITPFLHIPDMQEALTLFCDTLGFELKYRHS--N--Y--AYLELS-------------------GCGLRLLEEPARKI   60 (134)
T ss_dssp             CCEEEEEEEESCHHHHHHHHTTTTCCEEEEEET--T--E--EEEEET-------------------TEEEEEEECCCC--
T ss_pred             hhcceeEEEECCHHHHHHHHHhccCcEEEEeCC--C--e--EEEEEC-------------------CEEEEEEeCCCCCc
Confidence            355678999999999999999999999887632  1  2  333322                   34677765432111


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCC----EEeecCCCCccc-eEEEEECCCCcEEEEeecCc
Q 029933          107 DPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGV----EFAKKPDGGKLK-GVAFIKDPDDYWIEIFDLKT  177 (185)
Q Consensus       107 ~~~~~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~----~~~~~~~~~~~~-~~~~~~DPdG~~iEl~~~~~  177 (185)
                            ...    ..+..|++|.|+|+++++++|+++|+    ++..++....++ +.+||+|||||.|||.+...
T Consensus        61 ------~~~----~~~~~~l~~~v~dv~~~~~~l~~~g~~~g~~i~~~~~~~~~g~~~~~~~DPdG~~iel~~~~~  126 (134)
T 3fcd_A           61 ------IPD----GIARVAICIDVSDIDSLHTKLSPALENLPADQVEPLKNMPYGQREFQVRMPDGDWLNFTAPLA  126 (134)
T ss_dssp             -----------------EEEEEECSCHHHHHHHHHHHHTTSCGGGEEEEEECTTSEEEEEEECTTSCEEEEEEECC
T ss_pred             ------CCC----CCceEEEEEEeCCHHHHHHHHHhcCCccCCccccCCcccCCCcEEEEEECCCCCEEEEEEccc
Confidence                  110    11336999999999999999996654    444444433333 68999999999999999765

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125}

Probab=99.73  E-value=7.8e-17  Score=115.77  Aligned_cols=117  Identities=14%  Similarity=0.247  Sum_probs=83.7

Q ss_pred             eEEEEEEEeCChHHHHHHH---HHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCC
Q 029933           28 FMQQTMFRIKDPKVSLDFY---SRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT  104 (185)
Q Consensus        28 ~i~h~~l~v~D~e~s~~FY---~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~  104 (185)
                      +++|++|.|+|++++++||   +++|||++.....  . . . .|+. +                   ...++|......
T Consensus        20 ~i~hv~l~v~Dl~~a~~FY~~~~~~LG~~~~~~~~--~-~-~-~~~~-g-------------------~~~l~l~~~~~~   74 (146)
T 3ct8_A           20 MLHHVEINVDHLEESIAFWDWLLGELGYEDYQSWS--R-G-K-SYKH-G-------------------KTYLVFVQTEDR   74 (146)
T ss_dssp             SCCEEEEEESCHHHHHHHHHHHHHHTTCEEEEEET--T-E-E-EEEE-T-------------------TEEEEEEECCGG
T ss_pred             ceeEEEEEeCCHHHHHHHHHhhhhhCCCEEEEecC--C-C-c-eEec-C-------------------CeEEEEEEcCCC
Confidence            7999999999999999999   9999999887632  1 1 1 2332 1                   346777654321


Q ss_pred             CCCCCCCCCCCCCCCCCCceEEEEEeC---CHHHHHHHHHhcCCEEee-cCCC---CccceEEEEECCCCcEEEEeec
Q 029933          105 ESDPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAK-KPDG---GKLKGVAFIKDPDDYWIEIFDL  175 (185)
Q Consensus       105 ~~~~~~~~~~~~~~~~~g~~hi~~~v~---dv~~~~~~l~~~G~~~~~-~~~~---~~~~~~~~~~DPdG~~iEl~~~  175 (185)
                      ....   ++..   ...++.||+|.|+   |+++++++|+++|+++.. .|..   +...+.+||+|||||.|||+++
T Consensus        75 ~~~~---~~~~---~~~g~~hi~f~v~~~~dv~~~~~~l~~~G~~~~~~~p~~~~~g~~~~~~~~~DPdG~~iel~~p  146 (146)
T 3ct8_A           75 FQTP---TFHR---KRTGLNHLAFHAASREKVDELTQKLKERGDPILYEDRHPFAGGPNHYAVFCEDPNRIKVEIVAP  146 (146)
T ss_dssp             GSCS---CCCT---TSSSCCEEEEECSCHHHHHHHHHHHHHHTCCBCCTTTTTCTTCTTCCEEEEECTTCCEEEEECC
T ss_pred             cccc---cccc---cCCCceEEEEECCCHHHHHHHHHHHHHcCCccccCCCccccCCCceEEEEEECCCCCEEEEEeC
Confidence            0000   1111   1136689999999   999999999999999887 3432   2234679999999999999864

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus}

Probab=99.73  E-value=1.1e-16  Score=114.43  Aligned_cols=122  Identities=15%  Similarity=0.141  Sum_probs=78.7

Q ss_pred             EEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCCCC
Q 029933           30 QQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPD  109 (185)
Q Consensus        30 ~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~  109 (185)
                      ..+.|.|+|++++++||+++|||++.....  ...+  .++..+                   ...++|....+...  .
T Consensus         7 ~~~~l~v~Dl~~s~~FY~~~LG~~~~~~~~--~~~~--~~l~~g-------------------~~~l~l~~~~~~~~--~   61 (145)
T 2rk9_A            7 VVPELYCFDINVSQSFFVDVLGFEVKYERP--DEEF--VYLTLD-------------------GVDVMLEGIAGKSR--K   61 (145)
T ss_dssp             EEEEEEESSHHHHHHHHHHTTCCEEEEEEG--GGTE--EEEEET-------------------TEEEEEEEC--------
T ss_pred             ceEEEEECCHHHHHHHHHhccCCEEEeecC--CCCE--EEEEcC-------------------CeEEEEEeccCCCc--c
Confidence            478999999999999999999999875422  1223  233322                   34566654311110  0


Q ss_pred             CCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHh-cCCEEeecCC--------CCccceEEEEECCCCcEEEEeecCc
Q 029933          110 FKGYHNGNSEPRGFGHIGITVDDVYKACERFER-LGVEFAKKPD--------GGKLKGVAFIKDPDDYWIEIFDLKT  177 (185)
Q Consensus       110 ~~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~-~G~~~~~~~~--------~~~~~~~~~~~DPdG~~iEl~~~~~  177 (185)
                      +...........++ +++|.|+|+++++++|++ +|+++..+|.        ....++.+||+|||||.|||++...
T Consensus        62 ~~~~~~~~~~~~g~-~~~~~v~dvd~~~~~l~~~~G~~~~~~~~~~~~g~~~~~~~~~~~~~~DPdG~~iel~~~~~  137 (145)
T 2rk9_A           62 WLSGDLEFPLGSGV-NFQWDVIDIEPLYQRVNESAADSIYLALESKSYQCGDSIATQKQFMVQTPDGYLFRFCQDIH  137 (145)
T ss_dssp             -----CCSSTTTTE-EEEEECSCHHHHHHHHHHHHGGGEEEEEEEEEC-----CCEEEEEEEECTTCCEEEEEEC--
T ss_pred             cccCccccCCCCce-EEEEEECCHHHHHHHHHhhCCCeEecCccccccccCCCCCcceEEEEECCCCCEEEEEEcCC
Confidence            00000000111244 499999999999999999 9999887664        2334467999999999999998765

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans}

Probab=99.72  E-value=1.1e-16  Score=113.88  Aligned_cols=118  Identities=16%  Similarity=0.092  Sum_probs=80.6

Q ss_pred             eEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeec-----C
Q 029933           28 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHN-----W  102 (185)
Q Consensus        28 ~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~-----~  102 (185)
                      ++.|+.|.|+|++++++||+++|||++.....  ...+  .++..+                   ...+.+...     .
T Consensus         8 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~--~~~~--~~~~~~-------------------~~~l~l~~~~~~~~~   64 (141)
T 2rbb_A            8 DLSYVNIFTRDIVAMSAFYQQVFGFQEIESIR--SPIF--RGLDTG-------------------KSCIGFNAHEAYELM   64 (141)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEECGGGC--BTTE--EEEECS-------------------SSEEEEECTHHHHHT
T ss_pred             cccEEEEEECCHHHHHHHHHHhcCCeeecccC--CCce--EEeecC-------------------CEEEEEcCccccccc
Confidence            89999999999999999999999999875422  1122  222221                   233444221     0


Q ss_pred             CCCCCCCCCCCCCCCCCCCCceEEEEEeC---CHHHHHHHHHhcCCEEeecCCCCc-cceEEEEECCCCcEEEEeecCc
Q 029933          103 GTESDPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDGGK-LKGVAFIKDPDDYWIEIFDLKT  177 (185)
Q Consensus       103 ~~~~~~~~~~~~~~~~~~~g~~hi~~~v~---dv~~~~~~l~~~G~~~~~~~~~~~-~~~~~~~~DPdG~~iEl~~~~~  177 (185)
                      .... +    .  . ....+ .|++|.|+   |+++++++|+++|+++..+|.... +++.+||+|||||.|||++...
T Consensus        65 ~~~~-~----~--~-~~~~~-~~~~f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~~  134 (141)
T 2rbb_A           65 QLAQ-F----S--E-TSGIK-FLLNFDVDTKEAVDKLVPVAIAAGATLIKAPYETYYHWYQAVLLDPERNVFRINNVLE  134 (141)
T ss_dssp             TCGG-G----C--C-CBSCC-EEEEEECSCHHHHHHHHHHHHHTTCEEEEEEEECTTSEEEEEEECTTSCEEEEEEEC-
T ss_pred             cccc-c----C--C-CCCCe-EEEEEEcCCHHHHHHHHHHHHHcCCeEecCccccCCccEEEEEECCCCCEEEEEEccc
Confidence            0000 0    0  0 01124 49999999   599999999999999887764433 3568999999999999998643

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str}

Probab=99.72  E-value=1.5e-17  Score=118.03  Aligned_cols=118  Identities=22%  Similarity=0.218  Sum_probs=79.6

Q ss_pred             ceeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEE-----ee
Q 029933           26 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIEL-----TH  100 (185)
Q Consensus        26 ~~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l-----~~  100 (185)
                      .++++|+.|.|+|++++++||+++|||++....  +  .+ . .+..                    +..+..     ..
T Consensus         6 ~~~l~~v~l~v~D~~~a~~FY~~~LG~~~~~~~--~--~~-~-~~~~--------------------g~~l~~~~~~~~~   59 (141)
T 2qnt_A            6 GMRFVNPIPFVRDINRSKSFYRDRLGLKILEDF--G--SF-V-LFET--------------------GFAIHEGRSLEET   59 (141)
T ss_dssp             SCCCCCCCCEESCHHHHHHHHHHTTCCCEEEEC--S--SE-E-EETT--------------------SCEEEEHHHHHHH
T ss_pred             ccccceEEEEECCHHHHHHHHHHhcCCEEEEEc--C--Cc-E-EEec--------------------cceeccCchhhhh
Confidence            358899999999999999999999999987652  1  12 1 2221                    122221     11


Q ss_pred             cCCCCCCCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCEEeecCCCCccc-eEEEEECCCCcEEEEeecCc
Q 029933          101 NWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIFDLKT  177 (185)
Q Consensus       101 ~~~~~~~~~~~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~~~~~~~-~~~~~~DPdG~~iEl~~~~~  177 (185)
                      .+......   +..    ...+..|++|.|+|+++++++|++ |+++..+|....++ +.+|++|||||.|||++...
T Consensus        60 ~~~~~~~~---~~~----~~~~~~~~~~~v~dv~~~~~~l~~-G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~~  129 (141)
T 2qnt_A           60 IWRTSSDA---QEA----YGRRNMLLYFEHADVDAAFQDIAP-HVELIHPLERQAWGQRVFRFYDPDGHAIEVGESLS  129 (141)
T ss_dssp             HHSCCC-----CCC----SCCSSCEEEEEESCHHHHHC-CGG-GSCEEEEEEECTTSCEEEEEECTTCCEEEEEECC-
T ss_pred             ccccCCcc---ccc----cCCCceEEEEEeCcHHHHHHHHHc-CCccccCCccCCCCCEEEEEECCCCCEEEEEecch
Confidence            11000000   011    112668999999999999999999 99988776544333 68999999999999999754

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii}

Probab=99.72  E-value=3.3e-16  Score=127.31  Aligned_cols=121  Identities=13%  Similarity=0.125  Sum_probs=89.2

Q ss_pred             CceeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCC
Q 029933           25 NGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT  104 (185)
Q Consensus        25 ~~~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~  104 (185)
                      ...+++|++|.|+|++++++||+++|||++..... .++.....|+..+..                 +..+.+..... 
T Consensus       150 ~~~~l~Hv~l~v~D~~~a~~FY~~vLG~~~~~~~~-~~g~~~~~~l~~~~~-----------------~~~l~~~~~~~-  210 (339)
T 3lm4_A          150 PVKRIDHLNLMSSDVTAVKDSFERHLGFRTTERVV-DGNVEIGAWMSSNLL-----------------GHEVACMRDMT-  210 (339)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHHHHCCEEEEEEE-ETTEEEEEEEESSSS-----------------SCSEEEEECTT-
T ss_pred             CcceeeeEEEEcCCHHHHHHHHHHhCCCeEEEEEe-cCCcEEEEEEEeCCC-----------------ceEEEEeccCC-
Confidence            34589999999999999999999999999887754 233334556654331                 34566653211 


Q ss_pred             CCCCCCCCCCCCCCCCCCceEEEEEeCC---HHHHHHHHHhcCCEEeecCCCCc--cceEEEEECCCCcEEEEeecCc
Q 029933          105 ESDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGK--LKGVAFIKDPDDYWIEIFDLKT  177 (185)
Q Consensus       105 ~~~~~~~~~~~~~~~~~g~~hi~~~v~d---v~~~~~~l~~~G~~~~~~~~~~~--~~~~~~~~DPdG~~iEl~~~~~  177 (185)
                                   ....+++|++|.|+|   +++++++|+++|+++...|....  ....+|++|||||.|||+....
T Consensus       211 -------------~~~~~~~Hiaf~v~d~~~v~~~~~~l~~~G~~i~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~~~  275 (339)
T 3lm4_A          211 -------------GGHGKLHHLAFFYGTGQHNIDAVEMFRDYDIQIEAGPDKHGITQSQFLYVFEPGGNRIELFGEAG  275 (339)
T ss_dssp             -------------SCCSEEEEEEEECCCHHHHHHHHHHHHHTTCEEEEEEEEETGGGEEEEEEECTTSCEEEEECCCC
T ss_pred             -------------CCCCceeEEEEEeCCHHHHHHHHHHHHHCCCeEEeCCcccccCCceEEEEEcCCCCEEEEEEcCC
Confidence                         112267999999999   88889999999999987664322  2357999999999999986554

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3

Probab=99.71  E-value=2.9e-16  Score=125.40  Aligned_cols=121  Identities=14%  Similarity=0.225  Sum_probs=83.4

Q ss_pred             CCceeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCC
Q 029933           24 TNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWG  103 (185)
Q Consensus        24 ~~~~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~  103 (185)
                      ....+++|++|.|+|++++++||+++|||++..............|+..+..                 +..+++...  
T Consensus       146 ~~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~-----------------~~~~~~~~~--  206 (307)
T 1mpy_A          146 MAAVRFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTK-----------------AHDVAFIHH--  206 (307)
T ss_dssp             TCCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEECTTCCEEEEEEESSSB-----------------SCSEEEEEC--
T ss_pred             CCcCceeeEEEEcCCHHHHHHHHHHHcCCeeEeeeecCCCcEEEEEEEcCCC-----------------ceeEEEecC--
Confidence            3445899999999999999999999999998876432221111233333211                 223444321  


Q ss_pred             CCCCCCCCCCCCCCCCCCCceEEEEEeC---CHHHHHHHHHhcCCEEeecCCCC--ccceEEEEECCCCcEEEEeecCc
Q 029933          104 TESDPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDGG--KLKGVAFIKDPDDYWIEIFDLKT  177 (185)
Q Consensus       104 ~~~~~~~~~~~~~~~~~~g~~hi~~~v~---dv~~~~~~l~~~G~~~~~~~~~~--~~~~~~~~~DPdG~~iEl~~~~~  177 (185)
                      .              ..+.+.||+|.|+   ++++++++|+++|+++...|...  ..++.+||+|||||.|||++...
T Consensus       207 ~--------------~~g~~~hi~f~v~d~~dv~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  271 (307)
T 1mpy_A          207 P--------------EKGRLHHVSFHLETWEDLLRAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSGNRNEVFCGGD  271 (307)
T ss_dssp             S--------------SSSEEEEEEEECSCHHHHHHHHHHHHHHTCCEEEEEEECSSTTCEEEEEECTTSCEEEEEECCC
T ss_pred             C--------------CCCcceEEEEEcCCHHHHHHHHHHHHHCCCceeeCCccCCCCCceEEEEECCCCcEEEEEeccc
Confidence            0              0113689999999   56777899999999987655332  22457899999999999999653

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp}

Probab=99.71  E-value=3.7e-16  Score=127.06  Aligned_cols=124  Identities=20%  Similarity=0.224  Sum_probs=87.7

Q ss_pred             eeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecC--CCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCC
Q 029933           27 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFP--EMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT  104 (185)
Q Consensus        27 ~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~  104 (185)
                      .+|+|++|.|+|++++++||+++|||+++.+....  ...+.+++....+.                .+..++++.....
T Consensus         7 ~~i~Hv~l~v~Dl~~s~~FY~~vLGl~~v~~~~~~~~~~~~~l~~~~~~g~----------------~g~~l~l~~~~~~   70 (335)
T 3oaj_A            7 MGIHHITAIVGHPQENTDFYAGVLGLRLVKQTVNFDDPGTYHLYFGNEGGK----------------PGTIITFFPWAGA   70 (335)
T ss_dssp             CSEEEEEEEESCHHHHHHHHTTTTCCEEEEEEECSSCTTSEEEEEESTTCC----------------TTSEEEEEECTTC
T ss_pred             CcccEEEEEeCCHHHHHHHHHHhcCCEEEeeecCCCCCceEEEEEecCCCC----------------CCcEEEEEECCCC
Confidence            37999999999999999999999999998764322  12222332211110                0356777654222


Q ss_pred             CCCCCCCCCCCCCCCCCCceEEEEEeC--CHHHHHHHHHhcCCEEeecCCCCccceEEEEECCCCcEEEEeecCc
Q 029933          105 ESDPDFKGYHNGNSEPRGFGHIGITVD--DVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKT  177 (185)
Q Consensus       105 ~~~~~~~~~~~~~~~~~g~~hi~~~v~--dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~~  177 (185)
                      ..         +..+..++.|++|.|+  |+++++++|+++|+++..  ....+...+||+|||||.|||++...
T Consensus        71 ~~---------~~~~~~~~~hiaf~V~~~dl~~~~~rL~~~Gv~~~~--~~~~g~~~~~f~DPdGn~iEl~~~~~  134 (335)
T 3oaj_A           71 RQ---------GVIGDGQVGVTSYVVPKGAMAFWEKRLEKFNVPYTK--IERFGEQYVEFDDPHGLHLEIVEREE  134 (335)
T ss_dssp             CB---------CBCCBSEEEEEEEEECTTCHHHHHHHHHHTTCCCEE--EEETTEEEEEEECTTSCEEEEEECSC
T ss_pred             CC---------CCCCCCceEEEEEEecHHHHHHHHHHHHhCcceeee--eccCCcEEEEEECCCCCEEEEEEeCC
Confidence            10         1122346789999999  999999999999998875  22334468999999999999999764

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A*

Probab=99.70  E-value=5.9e-16  Score=123.87  Aligned_cols=120  Identities=14%  Similarity=0.114  Sum_probs=84.7

Q ss_pred             CCceeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCC-CceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecC
Q 029933           24 TNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE-MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNW  102 (185)
Q Consensus        24 ~~~~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~  102 (185)
                      ....+++|++|.|+|++++++||+++|||++......+. ......|+..+..                 ...+.+....
T Consensus       147 ~~~~~i~Hv~l~v~D~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~  209 (309)
T 3hpy_A          147 IAPIQLDHCLLYGPNIAEVQKIFTEVLGFYLVERVLSPDGDSDMGIWLSCSHK-----------------VHDIAFVEYP  209 (309)
T ss_dssp             SCCSEEEEEEEEESCHHHHHHHHHHTSCCEEEEEEECSSSCSEEEEEEESSSS-----------------SCSEEEEECS
T ss_pred             cccceeeeEEEEeCCHHHHHHHHHHhcCCEEEEEEecCCCCceEEEEEecCCC-----------------ceeEEEecCC
Confidence            344589999999999999999999999999887654322 2234555554321                 2234443210


Q ss_pred             CCCCCCCCCCCCCCCCCCCCceEEEEEeCCHHH---HHHHHHhcCCEEeecCCCC--ccceEEEEECCCCcEEEEeecC
Q 029933          103 GTESDPDFKGYHNGNSEPRGFGHIGITVDDVYK---ACERFERLGVEFAKKPDGG--KLKGVAFIKDPDDYWIEIFDLK  176 (185)
Q Consensus       103 ~~~~~~~~~~~~~~~~~~~g~~hi~~~v~dv~~---~~~~l~~~G~~~~~~~~~~--~~~~~~~~~DPdG~~iEl~~~~  176 (185)
                                      ...+++|++|.|+|+++   ++++|+++|+++...|...  .....+||+|||||+|||+..+
T Consensus       210 ----------------~~~~~~Hiaf~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~g  272 (309)
T 3hpy_A          210 ----------------EKGKLHHCSFLLESWEQVLRAGDIMSMNEVNVDIGPTRHGVTRGCTIYAWDPSGNRFETFMGG  272 (309)
T ss_dssp             ----------------STTEEEEEEEECSSHHHHHHHHHHHHHTTCCBSSCSEECSSSSEEEEEEECTTSCEEEEEEEC
T ss_pred             ----------------CCCceeEEEEECCCHHHHHHHHHHHHHCCCEEEeCCccCCCCccEEEEEECCCCCEEEEEeCC
Confidence                            11257999999988665   6789999999987655321  1235789999999999998763

>3zi1_A Glyoxalase domain-containing protein 4; isomerase; 1.90A {Homo sapiens}

Probab=99.69  E-value=4.6e-16  Score=126.18  Aligned_cols=119  Identities=18%  Similarity=0.281  Sum_probs=87.1

Q ss_pred             eEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCC
Q 029933           28 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESD  107 (185)
Q Consensus        28 ~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~  107 (185)
                      .+.|+.|.|+|++++++||+++|||++.......  .  ..++..++.                 ...+++......   
T Consensus       159 ~i~hv~L~v~Dl~~a~~FY~~vLG~~~~~~~~~~--~--~~~l~~g~~-----------------~~~l~l~~~~~~---  214 (330)
T 3zi1_A          159 PVLKVTLAVSDLQKSLNYWCNLLGMKIYENDEEK--Q--RALLGYADN-----------------QCKLELQGVKGG---  214 (330)
T ss_dssp             SEEEEEEEESCHHHHHHHHHHTTCCEEEEEETTT--T--EEEEESSTT-----------------SCEEEEEECSSC---
T ss_pred             ceeEEEEECCCHHHHHHHHHHhcCCEEEeeccCC--c--EEEEEeCCc-----------------eEEEEECCCCCC---
Confidence            5789999999999999999999999998875422  2  344554432                 345666543321   


Q ss_pred             CCCCCCCCCCCCCCCceEEEEEeC--CHHHHHHHHHhcCCEEeecCCC-----CccceEEEEECCCCcEEEEeecCccc
Q 029933          108 PDFKGYHNGNSEPRGFGHIGITVD--DVYKACERFERLGVEFAKKPDG-----GKLKGVAFIKDPDDYWIEIFDLKTIG  179 (185)
Q Consensus       108 ~~~~~~~~~~~~~~g~~hi~~~v~--dv~~~~~~l~~~G~~~~~~~~~-----~~~~~~~~~~DPdG~~iEl~~~~~~~  179 (185)
                           ...    ..++.|++|.|+  |+++++++|+++|+++..++..     ..+.+.+||+|||||.|||++....+
T Consensus       215 -----~~~----~~~~~hiaf~v~~~dld~~~~rl~~~G~~i~~~~~~~~~pg~~g~~~~~f~DPdG~~iEl~~~~~~~  284 (330)
T 3zi1_A          215 -----VDH----AAAFGRIAFSCPQKELPDLEDLMKRENQKILTPLVSLDTPGKATVQVVILADPDGHEICFVGDEAFR  284 (330)
T ss_dssp             -----CCC----BTTCCEEEEEECGGGHHHHHHHHHHTTCEEEEEEEEECCTTSCCEEEEEEECTTCCEEEEEEHHHHH
T ss_pred             -----CCC----CCCCceEEEEEEcccHHHHHHHHHHcCCcEecCceecccCCCCceEEEEEECCCCCEEEEEEecccc
Confidence                 111    125679999995  7999999999999998766532     12336899999999999999976544

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A

Probab=99.69  E-value=1.1e-15  Score=123.31  Aligned_cols=117  Identities=16%  Similarity=0.226  Sum_probs=84.2

Q ss_pred             CCceeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCC
Q 029933           24 TNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWG  103 (185)
Q Consensus        24 ~~~~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~  103 (185)
                      ....+++|++|.|+|++++++|| ++|||++........+.....|+..+..                 +..+.+...  
T Consensus       148 ~~~~~l~Hv~l~v~D~~~a~~FY-~~LGf~~~~~~~~~~g~~~~~f~~~~~~-----------------~~~~~~~~~--  207 (323)
T 1f1u_A          148 GELVRLDHFNQVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQT-----------------VHDTALTGG--  207 (323)
T ss_dssp             TCCCEEEEEEEEESCHHHHHHHH-HHTTCEEEEEEECTTCCEEEEEEESSSS-----------------SCSEEEEES--
T ss_pred             CCCceeeeEEEecCCHHHHHHHH-HhCCCeEEEEEEcCCCcEEEEEEEcCCC-----------------cccEEEeCC--
Confidence            44458999999999999999999 9999998876543333333445543221                 234554321  


Q ss_pred             CCCCCCCCCCCCCCCCCCCceEEEEEeCCHHH---HHHHHHhcCC--EEeecC-CCC-ccceEEEEECCCCcEEEEeec
Q 029933          104 TESDPDFKGYHNGNSEPRGFGHIGITVDDVYK---ACERFERLGV--EFAKKP-DGG-KLKGVAFIKDPDDYWIEIFDL  175 (185)
Q Consensus       104 ~~~~~~~~~~~~~~~~~~g~~hi~~~v~dv~~---~~~~l~~~G~--~~~~~~-~~~-~~~~~~~~~DPdG~~iEl~~~  175 (185)
                      .              .+ +++||+|.|+|+++   ++++|+++|+  ++...| +.. .....+|++|||||.||++..
T Consensus       208 ~--------------~~-~~~Hiaf~v~d~d~v~~~~~~l~~~G~~~~i~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~  271 (323)
T 1f1u_A          208 N--------------GP-RMHHVAFATHEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDGHRIEIYTQ  271 (323)
T ss_dssp             S--------------BS-EEEEEEEECSSHHHHHHHHHHHHHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEEC
T ss_pred             C--------------CC-CceEEEEECCCHHHHHHHHHHHHHCCCccccccCCCccCCCCcEEEEEECCCCCEEEEEeC
Confidence            0              11 67899999999998   9999999999  887543 222 223568999999999999864

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A*

Probab=99.68  E-value=4.4e-16  Score=123.93  Aligned_cols=118  Identities=20%  Similarity=0.260  Sum_probs=82.5

Q ss_pred             ceeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCC--------C-ceEEEeeccCCCCCCCCCCccceeeecCCCcEE
Q 029933           26 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE--------M-KFSLYFLGYEDTASAPADPVDRTVWTFGKPATI   96 (185)
Q Consensus        26 ~~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~--------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   96 (185)
                      ..+++|++|.|+|++++++||+++|||++......+.        + .....|+..+..                 +..+
T Consensus       140 ~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~-----------------~~~~  202 (300)
T 2zyq_A          140 EQGMGHVVLSTRDDAEALHFYRDVLGFRLRDSMRLPPQMVGRPADGPPAWLRFFGCNPR-----------------HHSL  202 (300)
T ss_dssp             GGCSCEEEEECSCHHHHHHHHHTTTCCEEEEEEEECGGGGTCCTTSCCEEEEEEESSSB-----------------SCSE
T ss_pred             CCccCeEEEEeCCHHHHHHHHHHhcCCEEeeeecccccccccCCCCCceEEEEEEECCC-----------------ccEE
Confidence            3589999999999999999999999999875432211        1 122344433211                 2345


Q ss_pred             EEeecCCCCCCCCCCCCCCCCCCCCCceEEEEEeCCHHH---HHHHHHhcCCEEeecCCCC--ccceEEEEECCCCcEEE
Q 029933           97 ELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYK---ACERFERLGVEFAKKPDGG--KLKGVAFIKDPDDYWIE  171 (185)
Q Consensus        97 ~l~~~~~~~~~~~~~~~~~~~~~~~g~~hi~~~v~dv~~---~~~~l~~~G~~~~~~~~~~--~~~~~~~~~DPdG~~iE  171 (185)
                      .+...  .              ...++.|++|.|+|+++   ++++|+++|+++...|...  ..++.+||+|||||+||
T Consensus       203 ~~~~~--~--------------~~~g~~h~af~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iE  266 (300)
T 2zyq_A          203 AFLPM--P--------------TSSGIVHLMVEVEQADDVGLCLDRALRRKVPMSATLGRHVNDLMLSFYMKTPGGFDIE  266 (300)
T ss_dssp             EEESS--C--------------CSSSEEEEEEEBSSHHHHHHHHHHHHHTTCCEEEEEEEESSSCCEEEEEECTTSSEEE
T ss_pred             EEecC--C--------------CCCCceEEEEEeCCHHHHHHHHHHHHHCCCceeecccccCCCCeEEEEEECCCCCEEE
Confidence            55421  0              11267899999998655   5999999999988765322  22457999999999999


Q ss_pred             EeecC
Q 029933          172 IFDLK  176 (185)
Q Consensus       172 l~~~~  176 (185)
                      |++..
T Consensus       267 l~~~~  271 (300)
T 2zyq_A          267 FGCEG  271 (300)
T ss_dssp             EEECC
T ss_pred             EEeCC
Confidence            99854

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis}

Probab=99.68  E-value=8.7e-16  Score=121.91  Aligned_cols=119  Identities=14%  Similarity=0.085  Sum_probs=82.3

Q ss_pred             eEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCC-ceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCC
Q 029933           28 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEM-KFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  106 (185)
Q Consensus        28 ~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~  106 (185)
                      .+.|+.|.|+|++++++||+++|||++......... .+..+...  +                  .....+........
T Consensus        32 ~~~~v~l~v~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~~~~~~~--g------------------~~~~~l~~~~~~~~   91 (282)
T 3oxh_A           32 TPNWVDLQTTDQSAAKKFYTSLFGWGYDDNPVPGGGGVYSMATLN--G------------------EAVAAIAPMPPGAP   91 (282)
T ss_dssp             SEEEEEEEESCHHHHHHHHHHHHCCEEEEEC-----CCEEEEEET--T------------------EEEEEEEECCSCC-
T ss_pred             CcEEEEEecCCHHHHHHHHHHhcCcEEeecCCCCCccCEEEEEeC--C------------------eeeEeeccCCCCCC
Confidence            699999999999999999999999998765321110 23222221  1                  12233332211100


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCEEeecCCCC-ccceEEEEECCCCcEEEEeecCc
Q 029933          107 DPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGG-KLKGVAFIKDPDDYWIEIFDLKT  177 (185)
Q Consensus       107 ~~~~~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~~~~-~~~~~~~~~DPdG~~iEl~~~~~  177 (185)
                            .     ......+++|.|+|+++++++++++|+++..+|... ..++.++|+||+||.|||++...
T Consensus        92 ------~-----~~~~~~~~~~~v~d~d~~~~~l~~~G~~~~~~p~~~~~~g~~~~~~DP~G~~i~l~~~~~  152 (282)
T 3oxh_A           92 ------E-----GMPPIWNTYIAVDDVDAVVDKVVPGGGQVMMPAFDIGDAGRMSFITDPTGAAVGLWQANR  152 (282)
T ss_dssp             -------------CCCEEEEEEECSCHHHHHTTTTTTTCEEEEEEEEETTTEEEEEEECTTCCEEEEEEESS
T ss_pred             ------C-----CCCCcEEEEEEeCCHHHHHHHHHHCCCEEEECCEecCCCeEEEEEECCCCCEEEEEEccc
Confidence                  0     011446899999999999999999999998776542 24578999999999999999765

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp}

Probab=99.67  E-value=1.4e-15  Score=123.58  Aligned_cols=119  Identities=9%  Similarity=0.091  Sum_probs=84.0

Q ss_pred             ceeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCC
Q 029933           26 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE  105 (185)
Q Consensus        26 ~~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~  105 (185)
                      -.+|+|++|.|+|++++.+||+++|||++..+..    .. ..+.. ++.                 +..+.+....+..
T Consensus       151 i~gl~Hv~L~v~Dle~t~~FY~~vLG~~~~~~~~----~~-~~~~~-g~~-----------------~~~l~l~~~~~~~  207 (335)
T 3oaj_A          151 IKGFGGATLLSEQPDKTADLLENIMGLERVGKEG----DF-VRYRS-AGD-----------------IGNVIDLKLTPIG  207 (335)
T ss_dssp             CCEEEEEEEECSSHHHHHHHHHHTSCCEEEEEET----TE-EEEEC-SSS-----------------SSCEEEEESSCCC
T ss_pred             hccccceEEEECCHHHHHHHHHHHhCCEEeeccC----CE-EEEEe-CCC-----------------CcEEEEEeCCCCC
Confidence            3589999999999999999999999999987631    12 22222 211                 3456665432211


Q ss_pred             CCCCCCCCCCCCCCCCCceEEEEEeCC---HHHHHHHHHhcCCEEeecCCCCccceEEEEECCCCcEEEEeecCc
Q 029933          106 SDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKT  177 (185)
Q Consensus       106 ~~~~~~~~~~~~~~~~g~~hi~~~v~d---v~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~~  177 (185)
                               .+..+.++++||||.|+|   +++++++|+++|+++.... +..+...+||+|||||+|||....+
T Consensus       208 ---------~~~~g~g~~~HiAf~v~d~~~l~~~~~~L~~~G~~~~~~~-~r~~~~siYfrDP~G~~iEl~td~p  272 (335)
T 3oaj_A          208 ---------RGQMGAGTVHHIAWRANDDEDQLDWQRYIASHGYGVTPVR-DRNYFNAIYFREHGEILFEIATDPP  272 (335)
T ss_dssp             ---------BCBCSBTEEEEEEEEESSHHHHHHHHHHHHHTTCCCCCCE-ECSSSEEEEEECTTSCEEEEEESCS
T ss_pred             ---------cCCCCCcceEEEEEEcCCHHHHHHHHHHHHHCCCCccccc-cCCcEEEEEEECCCCcEEEEEeCCC
Confidence                     111233478999999998   6678999999999865332 2334467999999999999998743

>3bt3_A Glyoxalase-related enzyme, ARAC type; VOC superfamily, PSI-2, NYSGXRC, structural genomics, prote structure initiative; 2.50A {Clostridium phytofermentans}

Probab=99.67  E-value=4.2e-16  Score=111.83  Aligned_cols=122  Identities=12%  Similarity=0.106  Sum_probs=75.8

Q ss_pred             eeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCC
Q 029933           27 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  106 (185)
Q Consensus        27 ~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~  106 (185)
                      +++.|+.|.|+|++++++||+++|||++........ .+.. + +                     . .+.+. ......
T Consensus        20 ~~~~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~-~~~~-~-g---------------------~-~l~l~-~~~~~~   73 (148)
T 3bt3_A           20 VRENGPVYFTKDMDKTVKWFEEILGWSGDIVARDDE-GFGD-Y-G---------------------C-VFDYP-SEVAVA   73 (148)
T ss_dssp             EEECCCEEEESCHHHHHHHHHHTTCCEEEEEEECTT-SCEE-E-E---------------------E-EESSC-TTTTSC
T ss_pred             EEeeeEEEEECCHHHHHHHHHhccCCEEEeeeecCC-CccE-E-c---------------------c-EEEEe-ccCCCc
Confidence            478999999999999999999999999864211111 1211 1 1                     1 12220 011100


Q ss_pred             CCCCCCCCCCCC---CCCCceEEEE-EeCCHHHHHHHHHhcCCEEeecCCCCccc-eEEEEECCCCcEEEEeecCc
Q 029933          107 DPDFKGYHNGNS---EPRGFGHIGI-TVDDVYKACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIFDLKT  177 (185)
Q Consensus       107 ~~~~~~~~~~~~---~~~g~~hi~~-~v~dv~~~~~~l~~~G~~~~~~~~~~~~~-~~~~~~DPdG~~iEl~~~~~  177 (185)
                        ..... .+..   +.....+.+| .|+|+++++++|+++|+++..+|....++ +.+||+|||||.|||++...
T Consensus        74 --~~~~~-~~~~~~~g~~~~~~~~~~~v~dvd~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~~  146 (148)
T 3bt3_A           74 --HLTPF-RGFHLFKGEPIKGVAGFMMIEGIDALHKYVKENGWDQISDIYTQPWGARECSITTTDGCILRFFESIQ  146 (148)
T ss_dssp             --C--CC-CSEEEEESCCCSSEEEEEEEECHHHHHHHHHHTTCCCBCCCEEETTTEEEEEEECTTSCEEEEEEEC-
T ss_pred             --ccccc-cccceeeccCCCccEEEEEcCCHHHHHHHHHHcCCccccCcccCCCccEEEEEECCCCCEEEEeeecc
Confidence              00000 0000   0001122355 99999999999999999988777543333 67999999999999998653

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A*

Probab=99.66  E-value=2.1e-15  Score=120.61  Aligned_cols=114  Identities=20%  Similarity=0.316  Sum_probs=83.1

Q ss_pred             eeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCC
Q 029933           27 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  106 (185)
Q Consensus        27 ~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~  106 (185)
                      .+++|+.|.|+|++++++||+++|||++..+..  ...  .++...+..                .+..+.+...  .  
T Consensus         7 ~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~--~~~--~~l~~~~~~----------------~~~~l~l~~~--~--   62 (309)
T 3hpy_A            7 LRPGHAQVRVLNLEEGIHFYRNVLGLVETGRDD--QGR--VYFKCWDER----------------DHSCYIIREA--D--   62 (309)
T ss_dssp             EEEEEEEEEESSHHHHHHHHHHTSCCEEEEECT--TSC--EEEECTTCC----------------BSCSEEEEEC--S--
T ss_pred             ceeeEEEEEcCCHHHHHHHHHhccCCEEEEEcC--CCe--EEEEeccCC----------------CceEEEEEeC--C--
Confidence            479999999999999999999999999887632  111  222211211                0234444321  1  


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEeCC---HHHHHHHHHhcCCEEeecCCC--CccceEEEEECCCCcEEEEeecCc
Q 029933          107 DPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDG--GKLKGVAFIKDPDDYWIEIFDLKT  177 (185)
Q Consensus       107 ~~~~~~~~~~~~~~~g~~hi~~~v~d---v~~~~~~l~~~G~~~~~~~~~--~~~~~~~~~~DPdG~~iEl~~~~~  177 (185)
                                   ..++.|++|.|++   +++++++|+++|+++...+..  ...++.+||+|||||.|||++...
T Consensus        63 -------------~~~~~h~a~~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~f~DPdG~~iel~~~~~  125 (309)
T 3hpy_A           63 -------------TAGIDFFGFKVLDKATLEKLDADLQAYGLTTTRIPAGEMLETGERVRFELPSGHLIELYAEKT  125 (309)
T ss_dssp             -------------SCEEEEEEEEESCHHHHHHHHHHHHHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESCBC
T ss_pred             -------------CCceeEEEEEECCHHHHHHHHHHHHhCCCceeeccCCccCCCeeEEEEECCCCCEEEEEEccc
Confidence                         0166899999986   999999999999998876643  344568999999999999999664

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans}

Probab=99.66  E-value=1.6e-15  Score=121.75  Aligned_cols=113  Identities=13%  Similarity=0.230  Sum_probs=83.3

Q ss_pred             CceeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCC
Q 029933           25 NGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT  104 (185)
Q Consensus        25 ~~~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~  104 (185)
                      ...+++|+.|.|+|++++++||+++|||++.....  +   ...|+..+..                 +..+.+...   
T Consensus       138 ~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~--~---~~~fl~~~~~-----------------~~~l~l~~~---  192 (310)
T 3b59_A          138 VPVKISHIVLHSPNHQDMVKFFTDVLGFKVSDWLG--D---FMCFLRCNSA-----------------HHRIAILPG---  192 (310)
T ss_dssp             CCCEEEEEEEEETTHHHHHHHHHHTSCCEEEEEET--T---TEEEEESSSB-----------------SCSEEEEES---
T ss_pred             cCcEeceEEEecCCHHHHHHHHHhCCCCEEEEeeC--C---eEEEEecCCC-----------------cceEEEECC---
Confidence            34589999999999999999999999999886531  1   1334443211                 334555421   


Q ss_pred             CCCCCCCCCCCCCCCCCCceEEEEEeCCHHHH---HHHHHhcCCEEeecCCCC--ccceEEEEECCCCcEEEEeecCc
Q 029933          105 ESDPDFKGYHNGNSEPRGFGHIGITVDDVYKA---CERFERLGVEFAKKPDGG--KLKGVAFIKDPDDYWIEIFDLKT  177 (185)
Q Consensus       105 ~~~~~~~~~~~~~~~~~g~~hi~~~v~dv~~~---~~~l~~~G~~~~~~~~~~--~~~~~~~~~DPdG~~iEl~~~~~  177 (185)
                             +        .+++|++|.|+|++++   +++|+++|+++...|...  .....+|++|||||.||+++...
T Consensus       193 -------~--------~g~~hi~f~v~d~d~~~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~~~  255 (310)
T 3b59_A          193 -------P--------PCLNHVAYDMLSVDDMMRGAHRLKVKGIDIGWGPGRHTAGNNTFSYFVTPGGFVTEYTSELE  255 (310)
T ss_dssp             -------S--------SEEEEEEEECSSHHHHHHHHHHHHHTTCCCSEEEEECSTTCCEEEEEECTTSCEEEEEECCC
T ss_pred             -------C--------CceEEEEEEcCCHHHHHHHHHHHHHcCCceeecCccccCCCcEEEEEECCCCCEEEEEeCcc
Confidence                   0        1678999999997777   999999999987665322  22357999999999999998653

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis}

Probab=99.66  E-value=1.8e-15  Score=120.04  Aligned_cols=116  Identities=15%  Similarity=0.169  Sum_probs=80.1

Q ss_pred             eEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCC
Q 029933           28 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESD  107 (185)
Q Consensus        28 ~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~  107 (185)
                      ++.|+.|.|+|++++++||+++|||++......+...+.  ++..++                  .....+...  . . 
T Consensus       164 ~~~~~~l~v~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~--~~~~~~------------------~~~~~~~~~--~-~-  219 (282)
T 3oxh_A          164 TLIWNELLTDKPDLALAFYEAVVGLTHSSMEIAAGQNYR--VLKAGD------------------AEVGGCMEP--P-M-  219 (282)
T ss_dssp             SEEEEEEECSCHHHHHHHHHHHHCCEEEEC-------CE--EEEETT------------------EEEEEEECC--S-S-
T ss_pred             ccEEEEEEcCCHHHHHHHHHHHhCCeeeeccCCCCcceE--EEEcCC------------------ccEeeecCC--C-C-
Confidence            789999999999999999999999998765311222232  222211                  111222111  1 0 


Q ss_pred             CCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCEEeecCCCCcc-ceEEEEECCCCcEEEEeecCc
Q 029933          108 PDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKL-KGVAFIKDPDDYWIEIFDLKT  177 (185)
Q Consensus       108 ~~~~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~~~~~~-~~~~~~~DPdG~~iEl~~~~~  177 (185)
                                .......|++|.|+|+++++++++++|+++..+|..... ++.+||+|||||.|||++...
T Consensus       220 ----------~~~~~~~~~~~~v~dvd~~~~~~~~~G~~~~~~p~~~~~~~~~~~~~DPdGn~~~l~~~~~  280 (282)
T 3oxh_A          220 ----------PGVPNHWHVYFAVDDADATAAKAAAAGGQVIAEPADIPSVGRFAVLSDPQGAIFSVLKAAP  280 (282)
T ss_dssp             ----------TTCCSEEEEEEECSCHHHHHHHHHHTTCEEEEEEEEETTTEEEEEEECTTSCEEEEEEEC-
T ss_pred             ----------CCCCCeEEEEEEeCCHHHHHHHHHHcCCEEecCCeEcCCCeEEEEEECCCCCEEEEEecCC
Confidence                      001144799999999999999999999999887754333 578999999999999999764

>1xy7_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G48480, reductively methylated protein, CATH 3.10.180 fold; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.9 PDB: 2q48_A

Probab=99.65  E-value=2.7e-15  Score=110.28  Aligned_cols=126  Identities=13%  Similarity=0.034  Sum_probs=78.6

Q ss_pred             CceeEEEEEEEeCC--hHHHHHHHHHhcCCEEeeeeec-------CCCceEEEeeccCCCCCCCCCCccceeeecCCCcE
Q 029933           25 NGYFMQQTMFRIKD--PKVSLDFYSRVLGMSLLKRLDF-------PEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPAT   95 (185)
Q Consensus        25 ~~~~i~h~~l~v~D--~e~s~~FY~~~LG~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   95 (185)
                      .++.-.++.|.|+|  ++++++||+++|||++.....+       ....+....+..+                   ...
T Consensus        21 ~~~~~i~~~L~v~D~~~~~A~~FY~~vfG~~~~~~~~~~~~~~~~~~~~~~~a~l~~~-------------------g~~   81 (166)
T 1xy7_A           21 LVFTEFKQMLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLA-------------------GSS   81 (166)
T ss_dssp             CCEEEEEEEEEECTTCHHHHHHHHHHHHCCEEC---------------CCCEEEEEET-------------------TEE
T ss_pred             CCCceEEEEEEECCcCHHHHHHHHHHHhCCEEEEEEccCCCCCCCCCCcEEEEEEEEC-------------------CeE
Confidence            33466789999999  9999999999999998764311       0111111222221                   234


Q ss_pred             EEEeecCCCCCCCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCEEeecCCCC--ccceEEEEECCCCcEEEEe
Q 029933           96 IELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGG--KLKGVAFIKDPDDYWIEIF  173 (185)
Q Consensus        96 l~l~~~~~~~~~~~~~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~~~~--~~~~~~~~~DPdG~~iEl~  173 (185)
                      +.+.... ...  .. +...+  ...+ .||+|.|+|+++++++|+++|++ ..++.+.  .+++.++|+||+||.|+|+
T Consensus        82 l~l~~~~-~~~--~~-~~~~~--~~~g-~~l~~~vdDvda~~~~l~~~G~~-~~~~~~~~~~~~r~~~v~DP~G~~~~l~  153 (166)
T 1xy7_A           82 FVVCDVS-SLP--GF-STAKS--EGSG-VTFLLGTKDAEAAVAKAVDAGAV-KVEVTEAEVELGFKGKVTDPFGVTWIFA  153 (166)
T ss_dssp             EEEEEGG-GST--TC-CCCCT--TSCC-CEEEEECSCHHHHHHHHHHTTCE-ECCCCHHHHHTTEEEEEECTTSCEEEEE
T ss_pred             EEEeCCC-ccc--CC-ccccC--CCCc-EEEEEEcCCHHHHHHHHHHCCCE-ECCcccccCcccEEEEEECCCCCEEEEE
Confidence            4443211 100  00 01000  0113 48999999999999999999999 8877654  3367899999999999999


Q ss_pred             ecCc
Q 029933          174 DLKT  177 (185)
Q Consensus       174 ~~~~  177 (185)
                      +...
T Consensus       154 ~~~~  157 (166)
T 1xy7_A          154 EKKT  157 (166)
T ss_dssp             C---
T ss_pred             eecC
Confidence            8654

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A*

Probab=99.65  E-value=1.4e-15  Score=120.93  Aligned_cols=117  Identities=17%  Similarity=0.217  Sum_probs=82.1

Q ss_pred             ceeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeec---CCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecC
Q 029933           26 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDF---PEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNW  102 (185)
Q Consensus        26 ~~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~  102 (185)
                      ..+++|+.|.|+|++++++||+++|||++......   ++......|+..+..                 +..+.+... 
T Consensus       140 ~~~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~l~l~~~-  201 (297)
T 1lgt_A          140 EQGLGHFVRCVPDSDKALAFYTDVLGFQLSDVIDMKMGPDVTVPAYFLHCNER-----------------HHTLAIAAF-  201 (297)
T ss_dssp             GGCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSB-----------------SCSEEEECC-
T ss_pred             ccccceEEEecCCHHHHHHHHHHhcCCeeeeEEeccCCCCccceEEEEEeCCC-----------------cceEEEEcC-
Confidence            35899999999999999999999999998764321   111122344443211                 234555421 


Q ss_pred             CCCCCCCCCCCCCCCCCCCCceEEEEEeCCHHHHH---HHHHhcCCEEeecCCCCc--cceEEEEECCCCcEEEEeecC
Q 029933          103 GTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKAC---ERFERLGVEFAKKPDGGK--LKGVAFIKDPDDYWIEIFDLK  176 (185)
Q Consensus       103 ~~~~~~~~~~~~~~~~~~~g~~hi~~~v~dv~~~~---~~l~~~G~~~~~~~~~~~--~~~~~~~~DPdG~~iEl~~~~  176 (185)
                       .              ...++.|++|.|+|++++.   ++ +++|+++...|....  ....+||+|||||.|||++..
T Consensus       202 -~--------------~~~~~~hiaf~v~d~~~~~~~~~~-~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~  264 (297)
T 1lgt_A          202 -P--------------LPKRIHHFMLEVASLDDVGFAFDR-VDADGLITSTLGRHTNDHMVSFYASTPSGVEVEYGWSA  264 (297)
T ss_dssp             -C--------------CSSSEEEEEEEBSCHHHHHHHHHH-HHTTTCEEEEEEEESSSCCEEEEEECTTSCEEEEEECC
T ss_pred             -C--------------CCCCceEEEEeCCCHHHHHHHHHH-HhCCCcccccCcccCCCCcEEEEEECCCCcEEEEecCC
Confidence             0              0126789999999988776   88 999999987664322  234589999999999999865

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3

Probab=99.65  E-value=1e-15  Score=122.15  Aligned_cols=114  Identities=17%  Similarity=0.245  Sum_probs=82.1

Q ss_pred             eeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCC
Q 029933           27 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  106 (185)
Q Consensus        27 ~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~  106 (185)
                      ++++|+.|.|+|++++++||+++|||++.....  ...   .++..+...               ....+.+..  ..  
T Consensus         6 ~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~--~~~---~~l~~~~~~---------------~~~~l~~~~--~~--   61 (307)
T 1mpy_A            6 MRPGHVQLRVLDMSKALEHYVELLGLIEMDRDD--QGR---VYLKAWTEV---------------DKFSLVLRE--AD--   61 (307)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHHTTCCEEEEECT--TSC---EEEECTTCC---------------BSCSEEEEE--CS--
T ss_pred             ceeeeEEEEeCCHHHHHHHHHHccCCEEEeecC--CCc---EEEEecCCC---------------CceEEEEcc--CC--
Confidence            489999999999999999999999999987632  111   233321100               012232211  11  


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEe---CCHHHHHHHHHhcCCEEeecCC--CCccceEEEEECCCCcEEEEeecCc
Q 029933          107 DPDFKGYHNGNSEPRGFGHIGITV---DDVYKACERFERLGVEFAKKPD--GGKLKGVAFIKDPDDYWIEIFDLKT  177 (185)
Q Consensus       107 ~~~~~~~~~~~~~~~g~~hi~~~v---~dv~~~~~~l~~~G~~~~~~~~--~~~~~~~~~~~DPdG~~iEl~~~~~  177 (185)
                                   ..+..|++|.|   +|+++++++|+++|+++...+.  ....++.+||+|||||.|||++...
T Consensus        62 -------------~~~~~~~~f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~  124 (307)
T 1mpy_A           62 -------------EPGMDFMGFKVVDEDALRQLERDLMAYGCAVEQLPAGELNSCGRRVRFQAPSGHHFELYADKE  124 (307)
T ss_dssp             -------------SCEEEEEEEEESCHHHHHHHHHHHHHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESCBC
T ss_pred             -------------CCCcceEEEEeCCHHHHHHHHHHHHHcCCceecCCcccCCCceEEEEEECCCCCEEEEEEcch
Confidence                         01568999999   7899999999999999987764  2234467899999999999999654

>4ghg_A Homoprotocatechuate 2,3-dioxygenase; oxygen activation, Fe(II), 2-His-1-carboxylate triad, 4-nitrocatechol, OXY complex, oxidoreductase; HET: P6G PG4 DHY; 1.50A {Brevibacterium fuscum} PDB: 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* 3ojn_A* 4ghh_A* 4ghc_A 4ghd_A* 4ghe_A* 4ghf_A* 3eck_A* 3ecj_A*

Probab=99.65  E-value=4.7e-15  Score=121.89  Aligned_cols=112  Identities=20%  Similarity=0.244  Sum_probs=81.2

Q ss_pred             eeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCC
Q 029933           27 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  106 (185)
Q Consensus        27 ~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~  106 (185)
                      .++.|+.|.|+|++++++||+++|||+++.+..    .  .+++...+..               .+..+.+...  .  
T Consensus        16 ~rl~hV~l~V~DLe~s~~FY~dvLGL~~~~~~~----~--~~~lr~~~~~---------------~~~~l~l~~~--~--   70 (365)
T 4ghg_A           16 LRCAYAELVVTDLAKSRNFYVDVLGLHVSYEDE----N--QIYLRSFEEF---------------IHHNLVLTKG--P--   70 (365)
T ss_dssp             EEEEEEEEEESCHHHHHHHHTTTTCCEEEEECS----S--EEEEECTTCC---------------SSCSEEEEEC--S--
T ss_pred             CEEEEEEEEeCCHHHHHHHHhhCCCCEEEEEcC----C--EEEEEeCCCC---------------cceEEEeccC--C--
Confidence            489999999999999999999999999987622    1  2333322110               0234444321  1  


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEeCC---HHHHHHHHHhcCCEEeecCCC--CccceEEEEECCCCcEEEEeecC
Q 029933          107 DPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDG--GKLKGVAFIKDPDDYWIEIFDLK  176 (185)
Q Consensus       107 ~~~~~~~~~~~~~~~g~~hi~~~v~d---v~~~~~~l~~~G~~~~~~~~~--~~~~~~~~~~DPdG~~iEl~~~~  176 (185)
                                   ..++.|++|.|.+   ++++.++|+++|+++...+..  ...+..++|+|||||.|||+...
T Consensus        71 -------------~~gl~~~a~~v~s~~dLd~~~~~L~~~Gv~v~~~~~~~~~~~g~~~~f~DPdG~~iEl~~~~  132 (365)
T 4ghg_A           71 -------------VAALKAMAFRVRTPEDVDKAEAYYQELGCRTERRKDGFVKGIGDALRVEDPLGFPYEFFFET  132 (365)
T ss_dssp             -------------SCEEEEEEEEESSHHHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECCB
T ss_pred             -------------CCCcceEEEEeCCHHHHHHHHHHHHHcCCcceeccccccCCCceEEEEECCCCCEEEEEEEe
Confidence                         1267899999975   888999999999998765532  23345799999999999998643

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A*

Probab=99.64  E-value=2.1e-15  Score=119.90  Aligned_cols=111  Identities=14%  Similarity=0.197  Sum_probs=82.0

Q ss_pred             eeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCC
Q 029933           27 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  106 (185)
Q Consensus        27 ~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~  106 (185)
                      .+|+|+.|.|+|++++++||+++|||++.....  +    ..++..++.                 ...+.+...  .  
T Consensus         3 ~~i~hv~l~v~Dl~~s~~FY~~~LG~~~~~~~~--~----~~~~~~~~~-----------------~~~l~~~~~--~--   55 (297)
T 1lgt_A            3 RSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTD--N----GDLFRIDSR-----------------AWRIAVQQG--E--   55 (297)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET--T----EEEEESSSB-----------------SCSEEEEEC--T--
T ss_pred             eEEEEEEEEcCCHHHHHHHHHHccCCEEeecCC--C----eEEEEeCCC-----------------cEEEEEecC--C--
Confidence            479999999999999999999999999887631  2    123333221                 123333211  1  


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEeC---CHHHHHHHHHhcCCEEeecCCC----CccceEEEEECCCCcEEEEeecCc
Q 029933          107 DPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDG----GKLKGVAFIKDPDDYWIEIFDLKT  177 (185)
Q Consensus       107 ~~~~~~~~~~~~~~~g~~hi~~~v~---dv~~~~~~l~~~G~~~~~~~~~----~~~~~~~~~~DPdG~~iEl~~~~~  177 (185)
                                   ..++.|++|.|+   |+++++++|+++|+++...+..    ...++.+||+|||||.|||++...
T Consensus        56 -------------~~~~~~~~f~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~  120 (297)
T 1lgt_A           56 -------------VDDLAFAGYEVADAAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITFADPFGLPLEIYYGAS  120 (297)
T ss_dssp             -------------TCEEEEEEEEESSHHHHHHHHHHHHHTTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEECCC
T ss_pred             -------------CCCccEEEEEeCCHHHHHHHHHHHHHCCCeEEeCCccccccCCceeEEEEECCCCCEEEEEECcc
Confidence                         116689999999   9999999999999998766532    133467999999999999999764

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10

Probab=99.64  E-value=4.9e-15  Score=120.12  Aligned_cols=118  Identities=10%  Similarity=0.048  Sum_probs=81.4

Q ss_pred             ceeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeecc-CCCCCCCCCCccceeeecCCCcEEEEeecCCC
Q 029933           26 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGY-EDTASAPADPVDRTVWTFGKPATIELTHNWGT  104 (185)
Q Consensus        26 ~~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~  104 (185)
                      -.+++|++|.|+|++++++||+++|||++.....    .+ ..|... ++..                ...+.+. . ..
T Consensus       178 ~~~l~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~----~~-~~~~~~~~g~~----------------~~~~~~~-~-~~  234 (338)
T 1zsw_A          178 IQGMGSVELTVRRLDKMASTLTEIFGYTEVSRND----QE-AIFQSIKGEAF----------------GEIVVKY-L-DG  234 (338)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHHTTCCEEEEECS----SE-EEEESSTTCST----------------TCEEEEE-C-CS
T ss_pred             CceEEEEEEEECCHHHHHHHHHHhcCCEEEeecC----Ce-EEEEecCCCCc----------------eEEEEec-c-CC
Confidence            3589999999999999999999999999887632    22 222221 1100                1123332 1 11


Q ss_pred             CCCCCCCCCCCCCCCCCCceEEEEEeC---CHHHHHHHHHhcCCEEeecCCCCccceEEEEECCCCcEEEEeecC
Q 029933          105 ESDPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLK  176 (185)
Q Consensus       105 ~~~~~~~~~~~~~~~~~g~~hi~~~v~---dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~  176 (185)
                      ..      .   ..+..++.|++|.|+   |+++++++|+++|+++. .+....+.+.+||+|||||.|||++..
T Consensus       235 ~~------~---~~~~~~~~hiaf~v~~~~dv~~~~~~l~~~G~~~~-~~~~~~~~~~~~~~DPdG~~iEl~~~~  299 (338)
T 1zsw_A          235 PT------E---KPGRGSIHHLAIRVKNDAELAYWEEQVKQRGFHSS-GIIDRFYFKSLYFRESNGILFEIATDG  299 (338)
T ss_dssp             SB------C---BCCBTCEEEEEEEESSHHHHHHHHHHHHHTTCCCC-CCEECSSEEEEEEECTTCCEEEEEEEE
T ss_pred             CC------C---CCCCCceEEEEEEeCCHHHHHHHHHHHHHCCCcee-eeeecCceEEEEEECCCCCEEEEEEcC
Confidence            00      0   011236789999999   69999999999999985 444444456799999999999999864

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10

Probab=99.64  E-value=7.4e-15  Score=119.05  Aligned_cols=126  Identities=14%  Similarity=0.132  Sum_probs=84.5

Q ss_pred             eeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecC-CCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCC
Q 029933           27 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFP-EMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE  105 (185)
Q Consensus        27 ~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~  105 (185)
                      .+++|++|.|+|++++++||+++|||++....... +......++..+..  .             ....+.+.......
T Consensus        29 ~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~g--~-------------~~~~l~l~~~~~~~   93 (338)
T 1zsw_A           29 KGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTG--S-------------PGTELSFFEIPLVG   93 (338)
T ss_dssp             CSEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEETTEEEEEEEEEESTTC--C-------------TTSEEEEEECTTCC
T ss_pred             ccccEEEEEcCCHHHHHHHHHHhcCCEEEEeecccCCCceEEEEEcCCCC--C-------------CCCEEEEEECCCCc
Confidence            47999999999999999999999999988764211 11111222222100  0             02455554432111


Q ss_pred             CCCCCCCCCCCCCCCCCceEEEEEeC---CHHHHHHHHHhcCCEEeecCCCCccceEEEEECCCCcEEEEeecCc
Q 029933          106 SDPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKT  177 (185)
Q Consensus       106 ~~~~~~~~~~~~~~~~g~~hi~~~v~---dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~~  177 (185)
                      .      .   .....++.||+|.|+   |+++++++|+++|+++...+. ..+.+.+||+|||||.|||++...
T Consensus        94 ~------~---~~~~~~~~hiaf~v~~~~dld~~~~~l~~~G~~~~~~~~-~~G~~~~~f~DPdG~~iel~~~~~  158 (338)
T 1zsw_A           94 R------T---YRGTNAITRIGLLVPSEDSLHYWKERFEKFDVKHSEMTT-YANRPALQFEDAEGLRLVLLVSNG  158 (338)
T ss_dssp             B------C---BCCBSEEEEEEEEESCHHHHHHHHHHHHHTTCEECCSEE-ETTEEEEEEECTTCCEEEEEECTT
T ss_pred             c------C---cCCCCCeeeEEEEcCCHHHHHHHHHHHHHCCCccccccc-cCCcEEEEEECCCCCEEEEEEcCC
Confidence            0      0   011236789999998   699999999999999876543 222367999999999999999764

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii}

Probab=99.64  E-value=9e-15  Score=118.83  Aligned_cols=112  Identities=21%  Similarity=0.342  Sum_probs=83.2

Q ss_pred             eeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCC
Q 029933           27 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  106 (185)
Q Consensus        27 ~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~  106 (185)
                      .+++|+.|.|+|++++++||+++|||++..+..  .   ..++...++..                ...+.+...  .  
T Consensus        10 ~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~--~---~~~l~~~~~~~----------------~~~l~l~~~--~--   64 (339)
T 3lm4_A           10 AHLARAELFSPKPQETLDFFTKFLGMYVTHREG--Q---SVYLRGYEDPY----------------PWSLKITEA--P--   64 (339)
T ss_dssp             EEEEEEEEEESSHHHHHHHHHHTTCCEEEEEET--T---EEEEECTTCSS----------------SCSEEEEEC--S--
T ss_pred             cEEEEEEEEeCCHHHHHHHHHhcCCCEEEEecC--C---EEEEEecCCCC----------------ceEEEEeeC--C--
Confidence            489999999999999999999999999887621  1   23333322110                233444321  1  


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEeCC---HHHHHHHHHhcCCEEeecCCCCccceEEEEECCCCcEEEEeecC
Q 029933          107 DPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLK  176 (185)
Q Consensus       107 ~~~~~~~~~~~~~~~g~~hi~~~v~d---v~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~  176 (185)
                                   ..++.|++|.|+|   +++++++|+++|+++...+.....++.+||+|||||.|||+...
T Consensus        65 -------------~~g~~~~af~v~~~~dld~~~~~l~~~G~~~~~~~~~~~~~~~~~f~DPdG~~iel~~~~  124 (339)
T 3lm4_A           65 -------------EAGMGHAAMRTSSPEALERRAKSLTDGNVDGTWSEDQFGYGKTFEYQSPDGHNLQLLWEA  124 (339)
T ss_dssp             -------------SCEEEEEEEEESSHHHHHHHHHHHHHTTCCEEEECCSTTBCCEEEEECTTCCEEEEECCB
T ss_pred             -------------CCCcceEEEEeCCHHHHHHHHHHHHHCCCceeeccCCCCceEEEEEECCCCCEEEEEEee
Confidence                         1167899999997   99999999999999987765444456899999999999998754

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B*

Probab=99.63  E-value=3.4e-15  Score=118.37  Aligned_cols=118  Identities=16%  Similarity=0.172  Sum_probs=80.8

Q ss_pred             CceeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecC--CC-ceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeec
Q 029933           25 NGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFP--EM-KFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHN  101 (185)
Q Consensus        25 ~~~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~  101 (185)
                      ...+++|++|.|+|++++++||+++|||++......+  .+ .....|+..+..                 +..+.+...
T Consensus       139 ~~~~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~g~~~~~~~~~~~~~-----------------~~~~~~~~~  201 (292)
T 1kw3_B          139 GDQGIGHFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNGR-----------------HHTIALAAF  201 (292)
T ss_dssp             GGGCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSB-----------------SCSEEEECC
T ss_pred             CCcccceEEEecCCHHHHHHHHHhccCCEEeeeeecccCCCccceEEEEEECCC-----------------cceEEEecC
Confidence            3458999999999999999999999999987543211  11 122334443211                 233444321


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCceEEEEEeCCHHH---HHHHHHhcCCEEeecCCCCc--cceEEEEECCCCc-EEEEeec
Q 029933          102 WGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYK---ACERFERLGVEFAKKPDGGK--LKGVAFIKDPDDY-WIEIFDL  175 (185)
Q Consensus       102 ~~~~~~~~~~~~~~~~~~~~g~~hi~~~v~dv~~---~~~~l~~~G~~~~~~~~~~~--~~~~~~~~DPdG~-~iEl~~~  175 (185)
                        .              ...+++|++|.|+|+++   ++++|+ +|+++...|....  ....+||+||||| .|||++.
T Consensus       202 --~--------------~~~~~~hiaf~v~d~~~v~~~~~~l~-~G~~~~~~p~~~~~~~~~~~y~~DPdG~~~iEl~~~  264 (292)
T 1kw3_B          202 --P--------------IPKRIHHFMLQANTIDDVGYAFDRLD-AAGRITSLLGRHTNDQTLSFYADTPSPMIEVEFGWG  264 (292)
T ss_dssp             --S--------------CSSSEEEEEEEBSSHHHHHHHHHHHH-HTTCBCBCSEEESSSCCEEEEEECSSTTCEEEEEEC
T ss_pred             --C--------------CCCceEEEEEEcCCHHHHHHHHHHHh-CCCceeecCcccCCCCeEEEEEECCCCCeeEEEEEC
Confidence              0              01267899999998665   677999 9999877663322  2346899999999 9999986


Q ss_pred             C
Q 029933          176 K  176 (185)
Q Consensus       176 ~  176 (185)
                      .
T Consensus       265 ~  265 (292)
T 1kw3_B          265 P  265 (292)
T ss_dssp             C
T ss_pred             C
Confidence            5

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B*

Probab=99.63  E-value=2.4e-15  Score=119.22  Aligned_cols=111  Identities=17%  Similarity=0.280  Sum_probs=81.2

Q ss_pred             eeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCC
Q 029933           27 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  106 (185)
Q Consensus        27 ~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~  106 (185)
                      .+++|+.|.|+|++++++||+++|||++..+..  + .   .++..++.                 ...+.+..  +.  
T Consensus         3 ~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~--~-~---~~l~~~~~-----------------~~~l~~~~--~~--   55 (292)
T 1kw3_B            3 ERLGYLGFAVKDVPAWDHFLTKSVGLMAAGSAG--D-A---ALYRADQR-----------------AWRIAVQP--GE--   55 (292)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET--T-E---EEEESSSB-----------------SCSEEEEE--CT--
T ss_pred             eeEEEEEEEeCCHHHHHHHHHhcCCCEEeecCC--C-e---EEEEcCCc-----------------eEEEEEcc--CC--
Confidence            379999999999999999999999999887631  1 1   23333221                 12233321  11  


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEeC---CHHHHHHHHHhcCCEEeecCCC----CccceEEEEECCCCcEEEEeecCc
Q 029933          107 DPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDG----GKLKGVAFIKDPDDYWIEIFDLKT  177 (185)
Q Consensus       107 ~~~~~~~~~~~~~~~g~~hi~~~v~---dv~~~~~~l~~~G~~~~~~~~~----~~~~~~~~~~DPdG~~iEl~~~~~  177 (185)
                                   ..++.|++|.|+   |+++++++|+++|+++...+..    ...++.+||+|||||.|||++...
T Consensus        56 -------------~~~~~~~~f~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~  120 (292)
T 1kw3_B           56 -------------LDDLAYAGLEVDDAAALERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQDPFGLPLEIYYGPA  120 (292)
T ss_dssp             -------------TCEEEEEEEECSSHHHHHHHHHHHHHHTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEECCC
T ss_pred             -------------CCCccEEEEEECCHHHHHHHHHHHHHcCCeEeecCcccccccCceEEEEEECCCCCEEEEEECcc
Confidence                         015689999998   8999999999999998876632    233467889999999999998764

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A

Probab=99.63  E-value=2.5e-15  Score=119.94  Aligned_cols=118  Identities=14%  Similarity=0.141  Sum_probs=80.1

Q ss_pred             CceeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecC--CC-ceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeec
Q 029933           25 NGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFP--EM-KFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHN  101 (185)
Q Consensus        25 ~~~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~  101 (185)
                      ...+++|++|.|+|++++++|| ++|||++......+  .+ .....|+..+..                 ...+.+...
T Consensus       146 ~~~~l~hv~l~v~D~~~a~~FY-~~lG~~~~~~~~~~~~~g~~~~~~~~~~~~~-----------------~~~~~~~~~  207 (302)
T 2ehz_A          146 GDQGLGHCIVRQTDVAEAHKFY-SLLGFRGDVEYRIPLPNGMTAELSFMHCNAR-----------------DHSIAFGAM  207 (302)
T ss_dssp             GGGCSCEEEECCSCHHHHHHHH-HHTTCBCCEEEEEECTTSCEEEEEEEBSSSB-----------------SCSEEECSC
T ss_pred             CCCccceEEEEcCCHHHHHHHH-HhcCCeeeeEEeccCCCCcceEEEEEEeCCC-----------------CcEEEEecC
Confidence            3458999999999999999999 99999987542211  11 123344443211                 223333210


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCceEEEEEeCCHHH---HHHHHHhcCCEEeecCCCC--ccceEEEEECCCCcEEEEeecC
Q 029933          102 WGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYK---ACERFERLGVEFAKKPDGG--KLKGVAFIKDPDDYWIEIFDLK  176 (185)
Q Consensus       102 ~~~~~~~~~~~~~~~~~~~~g~~hi~~~v~dv~~---~~~~l~~~G~~~~~~~~~~--~~~~~~~~~DPdG~~iEl~~~~  176 (185)
                        .              .+.+++|++|.|+|+++   ++++|+++|+++...|...  ...+.+||+|||||.|||+...
T Consensus       208 --~--------------~~~~~~hiaf~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iEl~~~~  271 (302)
T 2ehz_A          208 --P--------------AAKRLNHLMLEYTHMEDLGYTHQQFVKNEIDIALQLGIHANDKALTFYGATPSGWLIEPGWRG  271 (302)
T ss_dssp             --C--------------CSSSEEEEEEEESSHHHHHHHHHHHHHTTCCEEEEEEECTTTCCEEEEEECTTSSEEEEEECC
T ss_pred             --C--------------CCCceeEEEEEcCCHHHHHHHHHHHHHCCCcEEeCCcccCCCCceEEEEECCCCcEEEEEECc
Confidence              0              11367899999998765   6779999999988665322  2235789999999999998864

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A

Probab=99.63  E-value=2.6e-15  Score=119.91  Aligned_cols=117  Identities=14%  Similarity=0.140  Sum_probs=79.4

Q ss_pred             ceeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecC--CC-ceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecC
Q 029933           26 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFP--EM-KFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNW  102 (185)
Q Consensus        26 ~~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~  102 (185)
                      ..+++|++|.|+|++++++|| ++|||++......+  .+ .....|+..+..                 +..+.+... 
T Consensus       144 ~~~i~hv~l~v~D~~~s~~FY-~vLG~~~~~~~~~~~~~g~~~~~~~~~~~~~-----------------~~~~~~~~~-  204 (305)
T 2wl9_A          144 GQGLGHIIIREDDVEEATRFY-RLLGLEGAVEYKFALPNGAVGTPVFMHCNDR-----------------HHSLAFGVG-  204 (305)
T ss_dssp             TTCSCEEEECCSCHHHHHHHH-HHHTCEEEECBCEECTTSCEECCEEEESSSS-----------------SCSEEECCS-
T ss_pred             CceeeeEEEECCCHHHHHHHH-HHcCCeeeeeEecccCCCccceEEEEEcCCC-----------------ceEEEEecC-
Confidence            348999999999999999999 99999986532111  11 112233332211                 223443211 


Q ss_pred             CCCCCCCCCCCCCCCCCCCCceEEEEEeCC---HHHHHHHHHhcCCEEeecCCCC--ccceEEEEECCCCcEEEEeecC
Q 029933          103 GTESDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGG--KLKGVAFIKDPDDYWIEIFDLK  176 (185)
Q Consensus       103 ~~~~~~~~~~~~~~~~~~~g~~hi~~~v~d---v~~~~~~l~~~G~~~~~~~~~~--~~~~~~~~~DPdG~~iEl~~~~  176 (185)
                                     ....+++|++|.|+|   +++++++|+++|+++...|...  .....+||+|||||+|||++..
T Consensus       205 ---------------~~~~~~~hiaf~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~~  268 (305)
T 2wl9_A          205 ---------------PMDKRINHLMIEYTHLDDLGYAHDLVRQQKIDVTLQIGKHSNDEALTFYCANPSGWLWEPGWGS  268 (305)
T ss_dssp             ---------------CCSSSEEEEEEEESSHHHHHHHHHHHHHTTCCEEEEEEECTTTCCEEEEEECTTSSEEEEEECC
T ss_pred             ---------------CCCCCceEEEEEcCCHHHHHHHHHHHHHcCCCccccCcccCCCCcEEEEEECCCCCEEEEEeCC
Confidence                           011367899999998   6678889999999988665221  2235689999999999999865

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A*

Probab=99.61  E-value=3.7e-15  Score=118.56  Aligned_cols=109  Identities=17%  Similarity=0.217  Sum_probs=79.8

Q ss_pred             eeEEEEEEEeCChHHHHHHHHHhcCCEEee-eeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCC
Q 029933           27 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLK-RLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE  105 (185)
Q Consensus        27 ~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~  105 (185)
                      .+++|+.|.|+|++++++||+++|||++.. +.   ...   .++..++.                 ...+.+...  . 
T Consensus         4 ~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~---~~~---~~~~~~~~-----------------~~~l~l~~~--~-   57 (300)
T 2zyq_A            4 RSLGYLRIEATDMAAWREYGLKVLGMVEGKGAP---EGA---LYLRMDDF-----------------PARLVVVPG--E-   57 (300)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHHTSCCEECSSCC---SSC---EEEESSSS-----------------SCSEEEEEC--S-
T ss_pred             ceEEEEEEEeCCHHHHHHHHHHccCCEEeccCC---CCe---EEEEeCCC-----------------cEEEEEecC--C-
Confidence            489999999999999999999999999876 42   111   23333221                 223444321  0 


Q ss_pred             CCCCCCCCCCCCCCCCCceEEEEEeCC---HHHHHHHHHhcCCEEeecCCC----CccceEEEEECCCCcEEEEeec
Q 029933          106 SDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDG----GKLKGVAFIKDPDDYWIEIFDL  175 (185)
Q Consensus       106 ~~~~~~~~~~~~~~~~g~~hi~~~v~d---v~~~~~~l~~~G~~~~~~~~~----~~~~~~~~~~DPdG~~iEl~~~  175 (185)
                                    ..++.|++|.|++   +++++++|+++|+++...+..    ...++.+||+|||||.|||++.
T Consensus        58 --------------~~~~~~~~~~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  120 (300)
T 2zyq_A           58 --------------HDRLLEAGWECANAEGLQEIRNRLDLEGTPYKEATAAELADRRVDEMIRFADPSGNCLEVFHG  120 (300)
T ss_dssp             --------------SCEEEEEEEECSSHHHHHHHHHHHHHHTCCCEECCHHHHHHHTCSEEEEEECTTCCEEEEEEC
T ss_pred             --------------CCCcceEEEEeCCHHHHHHHHHHHHHcCCeEEeCChhhcccccceEEEEEECCCCCEEEEEEc
Confidence                          1266899999975   899999999999998766532    1334678999999999999997

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A*

Probab=99.61  E-value=1.1e-14  Score=113.96  Aligned_cols=109  Identities=15%  Similarity=0.222  Sum_probs=80.9

Q ss_pred             eEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCC
Q 029933           28 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESD  107 (185)
Q Consensus        28 ~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~  107 (185)
                      +++|+.|.|+|++++++||+++|||++..+..    .  .+++..+                   ...+.+......   
T Consensus        26 ~l~hV~L~V~Dle~s~~FY~~vLGl~~~~~~~----~--~~~L~~g-------------------~~~l~l~~~~~~---   77 (252)
T 3pkv_A           26 SIKQLTLYTAELDRMLAFYTNMLGAQHVHEQA----D--AFTIQLG-------------------VSQIQFRAAADG---   77 (252)
T ss_dssp             CEEEEEEEESCHHHHHHHHHHHHCGGGEEECS----S--EEEEEET-------------------TEEEEEEECCTT---
T ss_pred             eEEEEEEEeCCHHHHHHHHHHhcCCEEEEccC----C--EEEEEeC-------------------CEEEEEEECCCC---
Confidence            89999999999999999999999999887632    1  2344432                   345666533111   


Q ss_pred             CCCCCCCCCCCCCCCceEEEEEeC--CHHHHHHHHHhcCCEEeec-CC-----CCccceEEEEECCCCcEEEEeecCc
Q 029933          108 PDFKGYHNGNSEPRGFGHIGITVD--DVYKACERFERLGVEFAKK-PD-----GGKLKGVAFIKDPDDYWIEIFDLKT  177 (185)
Q Consensus       108 ~~~~~~~~~~~~~~g~~hi~~~v~--dv~~~~~~l~~~G~~~~~~-~~-----~~~~~~~~~~~DPdG~~iEl~~~~~  177 (185)
                                  ..+..|++|.|+  ++++++++|+++ +++..+ +.     ..+..+.+||+|||||.|||++...
T Consensus        78 ------------~~~~~hiaf~V~~~dld~~~~rL~~~-v~~~~~~~~~~~~~~~~g~~~~~f~DPdGn~iEl~~~~~  142 (252)
T 3pkv_A           78 ------------TKPFYHIAINIAANHFQEGKAWLSGF-GELLTENDEDQAYFPFFNAYSCYVEDPSGNIIELISRQQ  142 (252)
T ss_dssp             ------------CCCCCEEEEEECTTCHHHHHHHHTTS-SCCCCBTTBSCEEETTTTEEEEEEECTTCCEEEEEEESS
T ss_pred             ------------CCCeeEEEEEecHHHHHHHHHHHHhc-ceEeccCCccccccccCCeEEEEEECCCCCEEEEEEeCC
Confidence                        014689999985  699999999999 988652 22     2334568999999999999999654

>2r5v_A PCZA361.1; dioxygenase, non-heme iron, vancomycin, oxidoreductase; HET: HHH; 2.30A {Amycolatopsis orientalis}

Probab=99.61  E-value=1.5e-14  Score=118.24  Aligned_cols=135  Identities=17%  Similarity=0.260  Sum_probs=89.5

Q ss_pred             CCceeEEEEEEEeC--ChHHHHHHHHHhcCCEEeeeee--cCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEe
Q 029933           24 TNGYFMQQTMFRIK--DPKVSLDFYSRVLGMSLLKRLD--FPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELT   99 (185)
Q Consensus        24 ~~~~~i~h~~l~v~--D~e~s~~FY~~~LG~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~   99 (185)
                      ..-.+++|++|.|+  |++++++||+++|||++.....  .+...+...++..++                 +...++|.
T Consensus       154 ~~~~~l~Hv~l~V~~~D~~~~~~FY~~vLGf~~~~~~~~~~~~~~~~~~~l~~~~-----------------g~~~l~l~  216 (357)
T 2r5v_A          154 VDLLGIDHFAICLNAGDLGPTVEYYERALGFRQIFDEHIVVGAQAMNSTVVQSAS-----------------GAVTLTLI  216 (357)
T ss_dssp             CCCCEEEEEEEECCTTCHHHHHHHHHHHHCCEEEEEEEEEETTEEEEEEEEECTT-----------------SCCEEEEE
T ss_pred             CCcceEeEEEEEEchhhHHHHHHHHHHhcCCcEEEEEeeccCCcceEEEEEECCC-----------------CCEEEEEe
Confidence            34458999999999  9999999999999999886532  122223344444322                 14567776


Q ss_pred             ecCCCCCCCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCEEeecCCC------Cc-------c-----ceEEE
Q 029933          100 HNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDG------GK-------L-----KGVAF  161 (185)
Q Consensus       100 ~~~~~~~~~~~~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~~~------~~-------~-----~~~~~  161 (185)
                      .............+... ....+++||||.|+|+++++++|+++|+++...|..      ..       .     ...+|
T Consensus       217 ~~~~~~~~~~~~~~~~~-~~~~g~~Hiaf~v~Di~~~~~~L~~~Gv~~~~~p~~yy~~~~~r~~~~~~~~~~~~~~~~l~  295 (357)
T 2r5v_A          217 EPDRNADPGQIDEFLKD-HQGAGVQHIAFNSNDAVRAVKALSERGVEFLKTPGAYYDLLGERITLQTHSLDDLRATNVLA  295 (357)
T ss_dssp             EECTTSBCCHHHHHHHH-HTSSEEEEEEEECSCHHHHHHHHHHTTCCBCCCCHHHHHTTTTTCCCSSSCHHHHHHHTCEE
T ss_pred             eecCCCCCchhHHHHHh-cCCCCccEEEEEcCCHHHHHHHHHHcCCCcCCCchhHHHHHHHhhccchhhHHHHHHcCeEE
Confidence            54321100000000000 012378999999999999999999999998877621      00       0     13699


Q ss_pred             EECCCCcEEEEeecC
Q 029933          162 IKDPDDYWIEIFDLK  176 (185)
Q Consensus       162 ~~DPdG~~iEl~~~~  176 (185)
                      ++||||++|||++..
T Consensus       296 ~~Dp~G~llqi~t~~  310 (357)
T 2r5v_A          296 DEDHGGQLFQIFTAS  310 (357)
T ss_dssp             EEETTEEEEEEEBCC
T ss_pred             ecCCCceEEEEEccC
Confidence            999999999999853

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A

Probab=99.60  E-value=2.7e-14  Score=115.08  Aligned_cols=115  Identities=17%  Similarity=0.231  Sum_probs=84.0

Q ss_pred             CceeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCC
Q 029933           25 NGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT  104 (185)
Q Consensus        25 ~~~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~  104 (185)
                      .-.+++|+.|.|+|++++++||+++|||++..+.   + . ..++...+...                +..+.+...  .
T Consensus        14 ~i~~l~hv~l~v~Dl~~a~~FY~~vlG~~~~~~~---~-~-~~~l~~~~~~~----------------~~~l~l~~~--~   70 (323)
T 1f1u_A           14 DIVRCAYMEIVVTDLAKSREFYVDVLGLHVTEED---E-N-TIYLRSLEEFI----------------HHNLVLRQG--P   70 (323)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHTTTTCCEEEEEC---S-S-EEEEECTTCCS----------------SCSEEEEEC--S
T ss_pred             ccceeeEEEEEeCCHHHHHHHHHhCCCCEEeeec---C-C-EEEEEecCCCC----------------cEEEEEEEC--C
Confidence            3458999999999999999999999999988753   1 1 22222222110                234555321  0


Q ss_pred             CCCCCCCCCCCCCCCCCCceEEEEEe---CCHHHHHHHHHhcCCEEeecCC-C-CccceEEEEECCCCcEEEEeecCc
Q 029933          105 ESDPDFKGYHNGNSEPRGFGHIGITV---DDVYKACERFERLGVEFAKKPD-G-GKLKGVAFIKDPDDYWIEIFDLKT  177 (185)
Q Consensus       105 ~~~~~~~~~~~~~~~~~g~~hi~~~v---~dv~~~~~~l~~~G~~~~~~~~-~-~~~~~~~~~~DPdG~~iEl~~~~~  177 (185)
                                     ..++.|++|.|   +|+++++++|+++|+++...+. . ...++.++|+||+||.|||++...
T Consensus        71 ---------------~~~~~~~~f~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~DP~G~~iel~~~~~  133 (323)
T 1f1u_A           71 ---------------IAAVAAFAYRVKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRVEDPLGFPYEFFYETE  133 (323)
T ss_dssp             ---------------SCEEEEEEEEESSHHHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECCBC
T ss_pred             ---------------CCCeeEEEEEeCCHHHHHHHHHHHHhCCCcEEeccccccCCcceEEEEECCCCCEEEEEEecc
Confidence                           01568999999   7899999999999999987765 2 234567899999999999998654

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A

Probab=99.58  E-value=1e-14  Score=116.46  Aligned_cols=110  Identities=17%  Similarity=0.280  Sum_probs=81.0

Q ss_pred             eeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCC
Q 029933           27 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  106 (185)
Q Consensus        27 ~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~  106 (185)
                      .+++|+.|.|+|++++++||+++|||++.....  + .  ..++..++.                 +..+.+...  .  
T Consensus         5 ~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~--~-~--~~~~~~~~~-----------------~~~l~l~~~--~--   58 (305)
T 2wl9_A            5 TELGYLGLSVSNLDAWRDYAAGIMGMQVVDDGE--D-D--RIYLRMDRW-----------------HHRIVLHAD--G--   58 (305)
T ss_dssp             CEEEEEEEECSCHHHHHHHHTTTTCCEEECCSC--T-T--EEEEECSSB-----------------SCSEEEECS--S--
T ss_pred             ceeeEEEEEeCCHHHHHHHHHhccCCEEeeccC--C-C--eEEEEeCCC-----------------eEEEEEEEC--C--
Confidence            389999999999999999999999999876211  2 2  123333221                 234555321  0  


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEeC---CHHHHHHHHHhcCCEEeecCCC----CccceEEEEECCCCcEEEEeec
Q 029933          107 DPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDG----GKLKGVAFIKDPDDYWIEIFDL  175 (185)
Q Consensus       107 ~~~~~~~~~~~~~~~g~~hi~~~v~---dv~~~~~~l~~~G~~~~~~~~~----~~~~~~~~~~DPdG~~iEl~~~  175 (185)
                                   ..++.|++|.|+   |+++++++|+++|+++...|..    ...++.+||+|||||.|||++.
T Consensus        59 -------------~~~~~~~~f~v~~~~dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~~~DPdG~~iel~~~  121 (305)
T 2wl9_A           59 -------------SDDLAYIGWRVAGPVELDELAEQLKNAGIPFEVASDADAAERRVLGLVKLHDPGGNPTEIFYG  121 (305)
T ss_dssp             -------------CCEEEEEEEECSSHHHHHHHHHHHHHTTCCCEECCHHHHHHTTEEEEEEEECTTCCEEEEEEE
T ss_pred             -------------CCCeEEEEEEECCHHHHHHHHHHHHHCCCceEeCCcccccccCcEEEEEEECCCCCEEEEEEC
Confidence                         125689999997   6999999999999998876532    2334678999999999999987

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A

Probab=99.57  E-value=1.4e-14  Score=115.64  Aligned_cols=112  Identities=18%  Similarity=0.202  Sum_probs=80.5

Q ss_pred             ceeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCC
Q 029933           26 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE  105 (185)
Q Consensus        26 ~~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~  105 (185)
                      -.+++|+.|.|+|++++++||+++|||++..+..  . .  ..++..+..                 +..+.+...  . 
T Consensus         7 i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~--~-~--~~~~~~~~~-----------------~~~l~l~~~--~-   61 (302)
T 2ehz_A            7 VIELGYMGISVKDPDAWKSFATDMLGLQVLDEGE--K-D--RFYLRMDYW-----------------HHRIVVHHN--G-   61 (302)
T ss_dssp             EEEEEEEEEECSCHHHHHHHHHHTTCCEEECCSC--S-S--EEEEESSSB-----------------SCSEEEESS--C-
T ss_pred             ccEeeEEEEEeCCHHHHHHHHHhcCCCEEEeccC--C-c--ceEEEeCCC-----------------ceEEEEecC--C-
Confidence            3489999999999999999999999999886521  1 1  123332211                 233444311  0 


Q ss_pred             CCCCCCCCCCCCCCCCCceEEEEEeC---CHHHHHHHHHhcCCEEeecCCCC----ccceEEEEECCCCcEEEEeecC
Q 029933          106 SDPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDGG----KLKGVAFIKDPDDYWIEIFDLK  176 (185)
Q Consensus       106 ~~~~~~~~~~~~~~~~g~~hi~~~v~---dv~~~~~~l~~~G~~~~~~~~~~----~~~~~~~~~DPdG~~iEl~~~~  176 (185)
                                    ..++.|++|.|+   |+++++++|+++|+++...+...    ..++.+||+|||||.|||++..
T Consensus        62 --------------~~~~~~~~~~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  125 (302)
T 2ehz_A           62 --------------QDDLEYLGWRVAGKPEFEALGQKLIDAGYKIRICDKVEAQERMVLGLMKTEDPGGNPTEIFWGP  125 (302)
T ss_dssp             --------------CSEEEEEEEEESSHHHHHHHHHHHHHTTCCCEECCHHHHHHHTEEEEEEEECTTSCEEEEEEEE
T ss_pred             --------------CCCeeEEEEEECCHHHHHHHHHHHHHCCCcEEECCccccccccceEEEEEECCCCCEEEEEECC
Confidence                          115689999995   69999999999999987765321    2346789999999999999863

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans}

Probab=99.57  E-value=3.5e-14  Score=113.89  Aligned_cols=114  Identities=15%  Similarity=0.118  Sum_probs=83.3

Q ss_pred             ceeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCC
Q 029933           26 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE  105 (185)
Q Consensus        26 ~~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~  105 (185)
                      -.++.|+.|.|+|++++++||+++|||++....   + .  ..++..++..               ....+.+....   
T Consensus         6 i~~l~~v~l~v~Dl~~a~~FY~~vlG~~~~~~~---~-~--~~~l~~~~~~---------------~~~~l~l~~~~---   61 (310)
T 3b59_A            6 VTEIRYVGYGVKDFDAEKAFYADVWGLEPVGED---A-N--NAWFKAQGAD---------------EHHVVQLRRAD---   61 (310)
T ss_dssp             EEEEEEEEEEESSHHHHHHHHHHTTCCEEEEEC---S-S--EEEEECTTSC---------------CSCSEEEEECS---
T ss_pred             cceeeEEEEecCCHHHHHHHHHhCcCCEEeeec---C-C--eEEEEECCCC---------------CCEEEEEEECC---
Confidence            348999999999999999999999999988752   1 2  2333322200               02455554321   


Q ss_pred             CCCCCCCCCCCCCCCCCceEEEEEe---CCHHHHHHHHHhcCCEEeecCCC---CccceEEEEECCCCcEEEEeecCc
Q 029933          106 SDPDFKGYHNGNSEPRGFGHIGITV---DDVYKACERFERLGVEFAKKPDG---GKLKGVAFIKDPDDYWIEIFDLKT  177 (185)
Q Consensus       106 ~~~~~~~~~~~~~~~~g~~hi~~~v---~dv~~~~~~l~~~G~~~~~~~~~---~~~~~~~~~~DPdG~~iEl~~~~~  177 (185)
                                    ..+..|++|.|   +|+++++++|+++|+++...+..   ...++.++|+||+||.|||++...
T Consensus        62 --------------~~~~~~~~~~v~~~~dld~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~  125 (310)
T 3b59_A           62 --------------ENRIDVIALAADSRSDVDALRASVEAAGCKVASEPAVLATPGGGYGFRFFSPDGLLFEVSSDVA  125 (310)
T ss_dssp             --------------SCEEEEEEEEESSHHHHHHHHHHHHHHTCCBCCCSEECCSTTCCEEEEEECTTSCEEEEEECCC
T ss_pred             --------------CCCeeEEEEEeCCHHHHHHHHHHHHhCCCeEeecCccccccCCceEEEEECCCCCEEEEEEccc
Confidence                          01567999999   68999999999999998776532   334567899999999999998654

>2zw5_A Bleomycin acetyltransferase; dimer, two domains; HET: COA; 2.40A {Streptomyces verticillus} PDB: 2zw4_A* 2zw6_A 2zw7_A*

Probab=99.54  E-value=2e-13  Score=107.82  Aligned_cols=116  Identities=12%  Similarity=0.058  Sum_probs=78.6

Q ss_pred             eEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCC
Q 029933           28 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESD  107 (185)
Q Consensus        28 ~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~  107 (185)
                      ...++.|.|+|++++++||+++|||++......+ ..+  ..+..++..               ....+.+......   
T Consensus       183 ~~~~~~l~v~D~~~a~~FY~~~lG~~~~~~~~~~-~~~--~~~~~~~~~---------------~~~~~~~~~~~~~---  241 (301)
T 2zw5_A          183 LAVITELPVRDVAATLRLVEAALGARTAFAIGDP-PEF--AEAALTPWS---------------AGPRFRLAAVPGP---  241 (301)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHHSCCEEEEEEETT-EEE--EEEESSSSS---------------SSSEEEEEECCCS---
T ss_pred             ceeEEEEEeCCHHHHHHHHHHhcCCeEeeecCCC-ccE--EEEEcCCCc---------------cccccccccCCCc---
Confidence            4458899999999999999999999988543321 122  233322100               0022222111000   


Q ss_pred             CCCCCCCCCCCCCCCceEEEEEeC-CHHHHHHHHHhcCCEEeecCCCCcc-ceEEEEECCCCcEEEEeec
Q 029933          108 PDFKGYHNGNSEPRGFGHIGITVD-DVYKACERFERLGVEFAKKPDGGKL-KGVAFIKDPDDYWIEIFDL  175 (185)
Q Consensus       108 ~~~~~~~~~~~~~~g~~hi~~~v~-dv~~~~~~l~~~G~~~~~~~~~~~~-~~~~~~~DPdG~~iEl~~~  175 (185)
                             .+    ....+++|.|+ |+++++++++++|+++..+|....+ .+.++|+|||||.|||.++
T Consensus       242 -------~~----~~~~~~~~~v~~dvd~~~~~~~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~~~~~~~  300 (301)
T 2zw5_A          242 -------GP----VEPVRLHLDAAGTADSLHRRAVDAGARVDGPPVRRPWGRSEFVITLPEGHELTVSAP  300 (301)
T ss_dssp             -------SC----CCCCEEEEEEESCHHHHHHHHHHTTCCEEEEEEECTTSCEEEEEECTTSCEEEEEEC
T ss_pred             -------CC----CCceEEEEEcCccHHHHHHHHHHcCCccccCcccCCCcceEEEEECCCCCEEEeeCC
Confidence                   00    12358999999 9999999999999999887754443 3689999999999999875

>1u6l_A Hypothetical protein; structural genomics, PSI, protein STRU initiative, NEW YORK SGX research center for structural GEN nysgxrc; 2.81A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=99.53  E-value=8.7e-13  Score=95.07  Aligned_cols=118  Identities=14%  Similarity=0.077  Sum_probs=77.3

Q ss_pred             eeEEEEEEEeC-ChHHHHHHHHHhcCCEEeeeeecCC------------CceEEEeeccCCCCCCCCCCccceeeecCCC
Q 029933           27 YFMQQTMFRIK-DPKVSLDFYSRVLGMSLLKRLDFPE------------MKFSLYFLGYEDTASAPADPVDRTVWTFGKP   93 (185)
Q Consensus        27 ~~i~h~~l~v~-D~e~s~~FY~~~LG~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (185)
                      +++ +..|.|. |+++|++||+++||+++.....+.+            .......+..+                   .
T Consensus         3 m~~-~p~L~v~~d~~~A~~FY~~vfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~l~~~-------------------~   62 (149)
T 1u6l_A            3 LQI-VPYLIFNGNCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPADWKDKIMHARLVVG-------------------S   62 (149)
T ss_dssp             CEE-EEEEEESSCHHHHHHHHHHHHCSEEEEEEESTTTTC----CCSSCCCEEEEEEEET-------------------T
T ss_pred             ceE-EEEEEECCCHHHHHHHHHHHhCCEEEEEEEcccCCcccCCCcccCCcEEEEEEEEC-------------------C
Confidence            354 5888999 9999999999999999876533221            11111122221                   2


Q ss_pred             cEEEEeecCCCCCCCCCCCCCCCCCCCCCceEEEEEeCC---HHHHHHHHHhcCCEEeecCCCCccc-eEEEEECCCCcE
Q 029933           94 ATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYW  169 (185)
Q Consensus        94 ~~l~l~~~~~~~~~~~~~~~~~~~~~~~g~~hi~~~v~d---v~~~~~~l~~~G~~~~~~~~~~~~~-~~~~~~DPdG~~  169 (185)
                      ..+.+... ...  ..   .    ....+ .+|+|.|+|   +++++++|+ .|+++..++.+..++ +.++|+||+|+.
T Consensus        63 ~~l~~~d~-~~~--~~---~----~~~~g-~~l~~~v~d~~evd~~~~~l~-~Gg~i~~p~~~~~wG~r~~~v~Dp~G~~  130 (149)
T 1u6l_A           63 FALMASDN-HPA--YP---Y----EGIKG-CSISLNVDSKAEAERLFNALA-EGGSVQMPLGPTFWAASFGMFTDRFGVA  130 (149)
T ss_dssp             EEEEEEEC-CTT--SC---C----CCCCS-EEEEEECSSHHHHHHHHHHHH-TTSEEEEEEEEETTEEEEEEEECTTSCE
T ss_pred             EEEEEEcC-CCc--cC---C----CCCCc-eEEEEEcCCHHHHHHHHHHHH-CCCEEeecccccCcccceEEEECCCCCE
Confidence            23333221 110  00   0    00113 489999998   889999985 899999888665554 678899999999


Q ss_pred             EEEeecC
Q 029933          170 IEIFDLK  176 (185)
Q Consensus       170 iEl~~~~  176 (185)
                      |+|.+..
T Consensus       131 w~l~~~~  137 (149)
T 1u6l_A          131 WMVNCEQ  137 (149)
T ss_dssp             EEEEESC
T ss_pred             EEEEEec
Confidence            9999854

>4ghg_A Homoprotocatechuate 2,3-dioxygenase; oxygen activation, Fe(II), 2-His-1-carboxylate triad, 4-nitrocatechol, OXY complex, oxidoreductase; HET: P6G PG4 DHY; 1.50A {Brevibacterium fuscum} PDB: 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* 3ojn_A* 4ghh_A* 4ghc_A 4ghd_A* 4ghe_A* 4ghf_A* 3eck_A* 3ecj_A*

Probab=99.49  E-value=1.7e-12  Score=106.57  Aligned_cols=117  Identities=15%  Similarity=0.192  Sum_probs=81.4

Q ss_pred             CceeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCC
Q 029933           25 NGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT  104 (185)
Q Consensus        25 ~~~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~  104 (185)
                      ...++.|+.|.|.|++++..||++ |||++..............|+.....                 +..+.+...  .
T Consensus       149 ~~~rlgHV~L~v~D~~~t~~Fy~~-LGf~~sd~~~~~~g~~~~~f~~~~~~-----------------hH~la~~~~--~  208 (365)
T 4ghg_A          149 ELVRLDHFNQVTPDVPRGRKYLED-LGFRVTEDIQDDEGTTYAAWMHRKGT-----------------VHDTALTGG--N  208 (365)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHH-TTCEEEEEEECTTSCEEEEEEESSSS-----------------SCSEEEEES--S
T ss_pred             cCcceeEEEEeecCHHHHHHHHHh-cCCEEEEEEecCCCceeEEeeecCCc-----------------ccceeeecC--C
Confidence            345899999999999999999975 99998877655555555566654332                 344555321  1


Q ss_pred             CCCCCCCCCCCCCCCCCCceEEEEEeCCHHHH---HHHHHhcCCEE--eecCCCC--ccceEEEEECCCCcEEEEeecC
Q 029933          105 ESDPDFKGYHNGNSEPRGFGHIGITVDDVYKA---CERFERLGVEF--AKKPDGG--KLKGVAFIKDPDDYWIEIFDLK  176 (185)
Q Consensus       105 ~~~~~~~~~~~~~~~~~g~~hi~~~v~dv~~~---~~~l~~~G~~~--~~~~~~~--~~~~~~~~~DPdG~~iEl~~~~  176 (185)
                                     ..+++|++|.|+|++++   .++|+++|+..  ...|..+  ....++||+||+||+||+....
T Consensus       209 ---------------~~~lhHvaf~v~d~d~v~~~~d~l~~~g~~~~i~~GpgRH~~~~~~f~Y~~dP~G~~iE~~t~g  272 (365)
T 4ghg_A          209 ---------------GPRLHHVAFSTHEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDNHRIEIYTQD  272 (365)
T ss_dssp             ---------------BSEEEEEEEECSSHHHHHHHHHHHHHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEECC
T ss_pred             ---------------CCceeEEEEecCCHHHHHHHHHHHHhCCCCceeEeCCCccCCCCcEEEEEECCCCceEEEEcCC
Confidence                           12789999999987664   57788888853  2222111  1124689999999999998754

>1u7i_A Hypothetical protein; structural genomics, PA1358, PSI, PROT structure initiative; HET: MSE; 1.40A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=99.48  E-value=4.9e-12  Score=89.56  Aligned_cols=113  Identities=6%  Similarity=0.061  Sum_probs=75.3

Q ss_pred             EEEEeC--ChHHHHHHHHHhc-CCEEeeeeecCC------CceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecC
Q 029933           32 TMFRIK--DPKVSLDFYSRVL-GMSLLKRLDFPE------MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNW  102 (185)
Q Consensus        32 ~~l~v~--D~e~s~~FY~~~L-G~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~  102 (185)
                      ..|.+.  |++++++||+++| |+++.......+      ..+....+..+                   ...+.+....
T Consensus         9 ~~L~v~~~d~~~A~~FY~~~f~G~~~~~~~~~~~~~~~~~~~~~~a~~~~~-------------------g~~~~~~~~~   69 (136)
T 1u7i_A            9 PFLMFQGVQAEAAMNFYLSLFDDAEILQIQRYGAEGPGPEGSVLKALFRLG-------------------DQSVHCIDSH   69 (136)
T ss_dssp             EEEEEESSCHHHHHHHHHHHCSSEEEEEEEECCTTCSSCTTSEEEEEEEET-------------------TEEEEEEEES
T ss_pred             EEEEECCCCHHHHHHHHHHHcCCCEeeEEEEcccCCCCCCCcEEEEEEEEC-------------------CEEEEEECCC
Confidence            678887  9999999999999 999875322211      22222222221                   2233332211


Q ss_pred             CCCCCCCCCCCCCCCCCCCCceEEEEEeCC---HHHHHHHHHhcCCEEeecCCCCccc-eEEEEECCCCcEEEEeec
Q 029933          103 GTESDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIFDL  175 (185)
Q Consensus       103 ~~~~~~~~~~~~~~~~~~~g~~hi~~~v~d---v~~~~~~l~~~G~~~~~~~~~~~~~-~~~~~~DPdG~~iEl~~~  175 (185)
                       ..  +.   ...     ....+++|.|+|   +++++++++ +|+++..++.+..++ +.++++||+||.|+|...
T Consensus        70 -~~--~~---~~~-----~~~~~l~~~v~d~~evd~~~~~l~-~Gg~v~~p~~~~~~G~~~~~~~Dp~G~~w~l~~~  134 (136)
T 1u7i_A           70 -VR--HA---FDF-----TPAFSFFVDCESNAQIERLAEALS-DGGKALMPLGDYGFSQRFAWLADRFGVSWQLNLA  134 (136)
T ss_dssp             -SC--CS---CCC-----CTTEEEEEECCCHHHHHHHHHHHH-TTSEEEEEEECCSSSSEEEEEECTTSCEEEEEEC
T ss_pred             -CC--CC---CCC-----CCceEEEEEcCCHHHHHHHHHHHH-cCCEEecccccCCCcceEEEEECCCCCEEEEEec
Confidence             00  00   100     122479999999   999999999 999999888766554 678899999999999874

>1t47_A 4-hydroxyphenylpyruvate dioxygenase; triketone inhibitor, iron, oxidoreductase; HET: NTD; 2.50A {Streptomyces avermitilis} SCOP: d.32.1.3 d.32.1.3

Probab=99.47  E-value=1e-12  Score=108.43  Aligned_cols=128  Identities=19%  Similarity=0.146  Sum_probs=87.8

Q ss_pred             eeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeec--CCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCC
Q 029933           27 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDF--PEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT  104 (185)
Q Consensus        27 ~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~  104 (185)
                      .+++|+.|.|+|++++++||+++|||+++.+...  .......+++..+                   ...++|......
T Consensus        21 ~~i~hV~i~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~~~~~~g-------------------~~~l~l~~~~~~   81 (381)
T 1t47_A           21 KGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNG-------------------SARFVLTSVIKP   81 (381)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEET-------------------TEEEEEEEESSC
T ss_pred             ceEEEEEEEECCHHHHHHHHHHcCCCEEEEEEcCCCCCceEEEEEEecC-------------------CEEEEEecCCCC
Confidence            4899999999999999999999999999876321  1112233444432                   345666543221


Q ss_pred             CCCC--CCCCC--CCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCEEeecCCC---Cccc-eEEEEECCCCcEEEEeecC
Q 029933          105 ESDP--DFKGY--HNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDG---GKLK-GVAFIKDPDDYWIEIFDLK  176 (185)
Q Consensus       105 ~~~~--~~~~~--~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~~~---~~~~-~~~~~~DPdG~~iEl~~~~  176 (185)
                      ....  +...+  ..+    .++.||+|.|+|+++++++++++|+++..+|..   +.+. ..++++||+|++++|+++.
T Consensus        82 ~~~~~~~~~~~~~~~g----~gv~~iaf~V~D~~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~~pgg~~~~lv~~~  157 (381)
T 1t47_A           82 ATPWGHFLADHVAEHG----DGVVDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEHGTVVLAAIATYGKTRHTLVDRT  157 (381)
T ss_dssp             CSHHHHHHHHHHHHHC----SEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEE
T ss_pred             CCcchhHHHHHHHhcC----CceEEEEEEECCHHHHHHHHHHcCCEEeeccccccCCCCeEEEEEEecCCCcEEEEEecC
Confidence            1100  00000  011    278899999999999999999999999877642   2222 4678999999999999975


Q ss_pred             c
Q 029933          177 T  177 (185)
Q Consensus       177 ~  177 (185)
                      .
T Consensus       158 ~  158 (381)
T 1t47_A          158 G  158 (381)
T ss_dssp             E
T ss_pred             C
Confidence            4

>1t47_A 4-hydroxyphenylpyruvate dioxygenase; triketone inhibitor, iron, oxidoreductase; HET: NTD; 2.50A {Streptomyces avermitilis} SCOP: d.32.1.3 d.32.1.3

Probab=99.45  E-value=6.8e-13  Score=109.49  Aligned_cols=136  Identities=15%  Similarity=0.211  Sum_probs=88.8

Q ss_pred             CCceeEEEEEEEeC--ChHHHHHHHHHhcCCEEeeeee-----cCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEE
Q 029933           24 TNGYFMQQTMFRIK--DPKVSLDFYSRVLGMSLLKRLD-----FPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATI   96 (185)
Q Consensus        24 ~~~~~i~h~~l~v~--D~e~s~~FY~~~LG~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   96 (185)
                      ..-.+|+|++|.|+  |++++++||+++|||++.....     .+...+...++..+.                 +...+
T Consensus       180 ~~~~~idHv~l~V~~~dl~~a~~FY~~vLGf~~~~~~~~~~i~~~~~~~~~~~l~~~~-----------------g~v~i  242 (381)
T 1t47_A          180 RTFQAIDHCVGNVELGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADGT-----------------LKVKF  242 (381)
T ss_dssp             CSCCEEEEEEEECCTTCHHHHHHHHHHHHCCEECSCCBCHHHHTTTTSEEEEEEECTT-----------------SCSEE
T ss_pred             CCceEEeEEEEeeccccHHHHHHHHHHhhCCEEeeecCcceeccCCccEEEEEEECCC-----------------CcEEE
Confidence            33458999999999  9999999999999999886632     122233344443321                 13467


Q ss_pred             EEeecCCCCCCCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCEEeecCCCCcc------------------ce
Q 029933           97 ELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKL------------------KG  158 (185)
Q Consensus        97 ~l~~~~~~~~~~~~~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~~~~~~------------------~~  158 (185)
                      +|..............+.. .....|++||||.|+|+++++++|+++|+++...|.....                  ..
T Consensus       243 ~l~~~~~~~~~s~~~~~l~-~~~g~Gv~HiAf~vdDi~~~~~~L~~~Gv~~~~~p~~Yy~~l~~R~~~~~~~~~~l~~~~  321 (381)
T 1t47_A          243 PINEPALAKKKSQIDEYLE-FYGGAGVQHIALNTGDIVETVRTMRAAGVQFLDTPDSYYDTLGEWVGDTRVPVDTLRELK  321 (381)
T ss_dssp             EEEEECCSSSCCHHHHHHH-HHTSCEEEEEEEECSCHHHHHHHHHHTTCCBCCCCGGGTTSHHHHHCCCSSCHHHHHHHT
T ss_pred             EEecCCcCCCccHHHHHHH-HhCCCCcceEEEecCCHHHHHHHHHHcCCccCCCCccHHHHHHHhccccchhHHHHHHhC
Confidence            7765431111000000000 0012378999999999999999999999999887642111                  12


Q ss_pred             EEEEECCCCcEEEEeecCc
Q 029933          159 VAFIKDPDDYWIEIFDLKT  177 (185)
Q Consensus       159 ~~~~~DPdG~~iEl~~~~~  177 (185)
                      .+|-+|++|.++.|++..-
T Consensus       322 il~d~d~~g~llqift~~~  340 (381)
T 1t47_A          322 ILADRDEDGYLLQIFTKPV  340 (381)
T ss_dssp             CEEEECSSCEEEEEEBCCS
T ss_pred             eEEeeCCCCeEEEEeccCC
Confidence            5778999999999987553

>2r5v_A PCZA361.1; dioxygenase, non-heme iron, vancomycin, oxidoreductase; HET: HHH; 2.30A {Amycolatopsis orientalis}

Probab=99.42  E-value=5.5e-12  Score=102.91  Aligned_cols=126  Identities=15%  Similarity=0.138  Sum_probs=85.9

Q ss_pred             eeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCC
Q 029933           27 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  106 (185)
Q Consensus        27 ~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~  106 (185)
                      .+++|+.|.|+|++++++||+++|||+++.+....++.  .+++..+                   ...+.+........
T Consensus         4 ~~l~hv~~~v~D~~~a~~fy~~~LGf~~~~~~~~~~g~--~~~~~~g-------------------~~~l~l~~~~~~~~   62 (357)
T 2r5v_A            4 FEIDYVEMYVENLEVAAFSWVDKYAFAVAGTSRSADHR--SIALRQG-------------------QVTLVLTEPTSDRH   62 (357)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTEE--EEEEEET-------------------TEEEEEEEESSTTS
T ss_pred             ceEEEEEEEECCHHHHHHHHHHcCCCeEEEEEcCCCce--EEEEEeC-------------------CEEEEEeCCCCCCC
Confidence            37999999999999999999999999988764322222  2223221                   34566654212110


Q ss_pred             CC-CCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCEEeecCCC--CccceEEEEECCCCcEEEEeecCcc
Q 029933          107 DP-DFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDG--GKLKGVAFIKDPDDYWIEIFDLKTI  178 (185)
Q Consensus       107 ~~-~~~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~~~--~~~~~~~~~~DPdG~~iEl~~~~~~  178 (185)
                      .. .+. ...+    .++.|++|.|+|+++++++++++|+++..+|..  ......++++||+|+.++|+++..+
T Consensus        63 ~~~~~~-~~~g----~g~~~iaf~V~D~~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~~p~g~~~~lv~~~~~  132 (357)
T 2r5v_A           63 PAAAYL-QTHG----DGVADIAMATSDVAAAYEAAVRAGAEAVRAPGQHSEAAVTTATIGGFGDVVHTLIQRDGT  132 (357)
T ss_dssp             HHHHHH-HHHS----SEEEEEEEEESCHHHHHHHHHHTTCCEEEEEECCC-CCCCEEEEECSTTCEEEEEECCSS
T ss_pred             HHHHHH-HhcC----CeEEEEEEEECCHHHHHHHHHHcCCeEeECcEecCCCeEEEEEEeccCCeEEEEEecccC
Confidence            00 000 0011    277899999999999999999999999876632  1112467889999999999997543

>1sqd_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.3 d.32.1.3 PDB: 1tfz_A* 1tg5_A* 1sp9_A

Probab=99.41  E-value=3.2e-12  Score=106.89  Aligned_cols=133  Identities=18%  Similarity=0.156  Sum_probs=88.6

Q ss_pred             eeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecC--CCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCC
Q 029933           27 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFP--EMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT  104 (185)
Q Consensus        27 ~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~  104 (185)
                      ++++||.|.|+|++++++||+++|||+++.+...+  ...+..+++..+                   ...+.|......
T Consensus        24 ~~i~HV~i~V~Dle~a~~FY~~~LGf~~v~~~~~~~g~~~~~~~~l~~g-------------------~~~l~L~~~~~~   84 (424)
T 1sqd_A           24 KRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSG-------------------DLRFLFTAPYSP   84 (424)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHHHTCEEEEEESGGGTCSSEEEEEEEET-------------------TEEEEEEEECCG
T ss_pred             CeEEEEEEEECCHHHHHHHHHHcCCCEEEEEEcCCCCceeEEEEEEcCC-------------------CEEEEEecCCCC
Confidence            48999999999999999999999999988764322  223344444432                   345666544221


Q ss_pred             CC---------CCCCCCCCCC------CCCCCCceEEEEEeCCHHHHHHHHHhcCCEEeecCCCC-ccceEEEEECCCCc
Q 029933          105 ES---------DPDFKGYHNG------NSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGG-KLKGVAFIKDPDDY  168 (185)
Q Consensus       105 ~~---------~~~~~~~~~~------~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~~~~-~~~~~~~~~DPdG~  168 (185)
                      ..         ......++..      .....++.||+|.|+|+++++++++++|+++..+|... ......++++|+|+
T Consensus        85 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~gv~~iAf~VdDvdaa~~~l~a~Ga~~~~~P~~~~~~~~~~~i~~~Gg~  164 (424)
T 1sqd_A           85 SLSAGEIKPTTTASIPSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGAIPSSPPIVLNEAVTIAEVKLYGDV  164 (424)
T ss_dssp             GGTTTCCGGGCCCSSTTCCHHHHHHHHHHHCSEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEEETTTEEEEEEEEETTE
T ss_pred             cccccccccccccccccccchHHHHHHHhcCCeEEEEEEEeCCHHHHHHHHHHcCCEEeecCcCCCCceEEEEEEcCCCc
Confidence            10         0000000000      00113789999999999999999999999998877432 11245777889999


Q ss_pred             EEEEeecCcc
Q 029933          169 WIEIFDLKTI  178 (185)
Q Consensus       169 ~iEl~~~~~~  178 (185)
                      +++|+++...
T Consensus       165 ~~~lvd~~g~  174 (424)
T 1sqd_A          165 VLRYVSYKAE  174 (424)
T ss_dssp             EEEEEEECCC
T ss_pred             EEEEEecCCC
Confidence            9999887654

>1cjx_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase, iron; 2.40A {Pseudomonas fluorescens} SCOP: d.32.1.3 d.32.1.3

Probab=99.34  E-value=1e-11  Score=101.44  Aligned_cols=130  Identities=13%  Similarity=0.232  Sum_probs=83.6

Q ss_pred             eeEEEEEEEeC--ChHHHHHHHHHhcCCEEeeeeecCC--CceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeec-
Q 029933           27 YFMQQTMFRIK--DPKVSLDFYSRVLGMSLLKRLDFPE--MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHN-  101 (185)
Q Consensus        27 ~~i~h~~l~v~--D~e~s~~FY~~~LG~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~-  101 (185)
                      .+|+|++|.|+  |++++++||+++|||++........  ..+....+..                 ..+...++|... 
T Consensus       157 ~~idHv~l~V~~~dl~~a~~FY~~vLGf~~~~~~~~~~~~~~~~~~~~~~-----------------~~g~~~i~L~~~~  219 (357)
T 1cjx_A          157 KVIDHLTHNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSA-----------------PDGMIRIPLNEES  219 (357)
T ss_dssp             EEEEEECEECCTTHHHHHHHHHHHHHCCEEEEEEEEECSSCEEEEEEEEC-----------------TTSSCEEEEEEEC
T ss_pred             eEECceEEeechhhHHHHHHHHHHhhCCceeeEEEeccCCcceEEEEEEC-----------------CCCCEEEEEeeec
Confidence            47999999999  9999999999999999887643211  1111111111                 112457888654 


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCEEee-cCC---------CCccc---------eEEEE
Q 029933          102 WGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAK-KPD---------GGKLK---------GVAFI  162 (185)
Q Consensus       102 ~~~~~~~~~~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~-~~~---------~~~~~---------~~~~~  162 (185)
                      .....  ....+.. .....+++||||.|+|+++++++|+++|+++.. .|.         .+..+         ..+|.
T Consensus       220 ~~~~~--~~~~~~~-~~~g~g~~HiAf~v~Di~~~~~~L~~~Gv~~~~~~p~~Yy~~l~~r~~~~~~~~~~l~~~~il~d  296 (357)
T 1cjx_A          220 SKGAG--QIEEFLM-QFNGEGIQHVAFLTDDLVKTWDALKKIGMRFMTAPPDTYYEMLEGRLPDHGEPVDQLQARGILLD  296 (357)
T ss_dssp             TTCCS--HHHHHHH-HHTSSBCCEEEEEESCHHHHHHHHHHTTCCBCCCCCHHHHHTHHHHSTTCCCCHHHHHHHTCEEE
T ss_pred             CCCCC--hHHHhHH-hcCCCCeeEEEEEcCCHHHHHHHHHHcCCcccCCCChHHHHHHHHHhccccccHHHHHHcCeEEe
Confidence            22111  0000000 001237899999999999999999999999987 551         11111         14777


Q ss_pred             EC----CCCcEEEEeecC
Q 029933          163 KD----PDDYWIEIFDLK  176 (185)
Q Consensus       163 ~D----PdG~~iEl~~~~  176 (185)
                      +|    |+|++|+|++..
T Consensus       297 ~d~~~~~~g~llqift~~  314 (357)
T 1cjx_A          297 GSSVEGDKRLLLQIFSET  314 (357)
T ss_dssp             EEEETTEEEEEEEEEBCC
T ss_pred             cCCCCCCCCeEEEEeccC
Confidence            88    889999888754

>1sqd_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.3 d.32.1.3 PDB: 1tfz_A* 1tg5_A* 1sp9_A

Probab=99.32  E-value=5e-12  Score=105.76  Aligned_cols=104  Identities=12%  Similarity=0.312  Sum_probs=71.0

Q ss_pred             eeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCC-----CceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeec
Q 029933           27 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE-----MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHN  101 (185)
Q Consensus        27 ~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~  101 (185)
                      .+|+|++|.|.|++++++||+++|||++..+....+     .++...++..+.                 +...++|...
T Consensus       201 ~~idHv~i~V~dl~~a~~FY~~~LGf~~~~~~~~~d~~~~~~gl~s~~l~~~~-----------------g~~~l~l~e~  263 (424)
T 1sqd_A          201 RRLDHAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLASND-----------------EMVLLPINEP  263 (424)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEC--------CCEEEEEEECTT-----------------SCSEEEEEEE
T ss_pred             ceEeeEEEeeCCHHHHHHHHHHhhCCeEEEEEcccccccccccceEEEEEcCC-----------------CcEEEEEecc
Confidence            589999999999999999999999999987753222     133333443322                 2457777665


Q ss_pred             CCC-CCCCCCCCC---CCCCCCCCCceEEEEEeCCHHHHHHHHHh----cCCEEeecC
Q 029933          102 WGT-ESDPDFKGY---HNGNSEPRGFGHIGITVDDVYKACERFER----LGVEFAKKP  151 (185)
Q Consensus       102 ~~~-~~~~~~~~~---~~~~~~~~g~~hi~~~v~dv~~~~~~l~~----~G~~~~~~~  151 (185)
                      ... ..+....++   ..|    .|++||||.|+|+.+++++|++    +|+++...|
T Consensus       264 ~~~~~~~s~i~~fl~~~~G----~G~~HIAf~vdDI~~a~~~L~~r~~~~Gv~~l~~p  317 (424)
T 1sqd_A          264 VHGTKRKSQIQTYLEHNEG----AGLQHLALMSEDIFRTLREMRKRSSIGGFDFMPSP  317 (424)
T ss_dssp             CCC---CCHHHHHHHHHTS----CEEEEEEEEESCHHHHHHHHHHHGGGTSCCBCCCC
T ss_pred             cccCCCcchhhhhhhhcCC----CCcCEEEEEeCCHHHHHHHHHhhhccCCcEEecCC
Confidence            311 111000011   122    2899999999999999999999    899999865

>1sp8_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 2.00A {Zea mays} SCOP: d.32.1.3 d.32.1.3

Probab=99.31  E-value=7.3e-12  Score=104.57  Aligned_cols=105  Identities=13%  Similarity=0.276  Sum_probs=71.4

Q ss_pred             ceeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCC-----CceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEee
Q 029933           26 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE-----MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTH  100 (185)
Q Consensus        26 ~~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~  100 (185)
                      -.+|+|++|.|.|++++++||+++|||++.......+     .++...++..+.                 +...+++..
T Consensus       197 ~~~idHv~i~V~dl~~a~~FY~~vLGf~~~~~~~~~d~~~~~~gl~s~~l~~~~-----------------g~i~l~l~e  259 (418)
T 1sp8_A          197 LSRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNS-----------------ENVLLPLNE  259 (418)
T ss_dssp             EEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEC--------CEEEEEEECSS-----------------SCCEEEEEE
T ss_pred             cceEeeEEEecCCHHHHHHHHHHHcCCEEEEEecccccccccccceEEEEEcCC-----------------CcEEEEEee
Confidence            3589999999999999999999999999987654322     123334444322                 145677765


Q ss_pred             cCCC-CCCCCCCCC---CCCCCCCCCceEEEEEeCCHHHHHHHHHh----cCCEEeecC
Q 029933          101 NWGT-ESDPDFKGY---HNGNSEPRGFGHIGITVDDVYKACERFER----LGVEFAKKP  151 (185)
Q Consensus       101 ~~~~-~~~~~~~~~---~~~~~~~~g~~hi~~~v~dv~~~~~~l~~----~G~~~~~~~  151 (185)
                      .... ........+   ..|    .|++||+|.|+||++++++|++    +|+++...|
T Consensus       260 ~~~~~~~~s~i~~fl~~~~G----~G~~HIAf~vdDI~~a~~~L~~r~~~~Gv~~l~~P  314 (418)
T 1sp8_A          260 PVHGTKRRSQIQTFLDHHGG----PGVQHMALASDDVLRTLREMQARSAMGGFEFMAPP  314 (418)
T ss_dssp             ECCCSSSCCHHHHHHHHHTS----SEEEEEEEEETTHHHHHHHHHTSGGGTSCCBCCCC
T ss_pred             cccccCCCcchhhhhhccCC----CCcCEEEEEeCCHHHHHHHHhhhhccCCeEEccCC
Confidence            5311 110000001   122    2899999999999999999999    799999875

>1sp8_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 2.00A {Zea mays} SCOP: d.32.1.3 d.32.1.3

Probab=99.29  E-value=4.4e-11  Score=99.82  Aligned_cols=133  Identities=13%  Similarity=0.078  Sum_probs=88.0

Q ss_pred             eeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecC--CCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCC
Q 029933           27 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFP--EMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT  104 (185)
Q Consensus        27 ~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~  104 (185)
                      ++++||.|.|+|++++++||++.|||+++.+...+  ......+++..+                   ...++|......
T Consensus        30 ~~l~hV~i~V~Dle~a~~fY~~~LGf~~~~~~~~~~G~~~~~~~~~~~G-------------------~~~l~L~~~~~~   90 (418)
T 1sp8_A           30 LAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSG-------------------SLSFLFTAPYAH   90 (418)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHHHTCCEEEEESGGGTCCSEEEEEEEET-------------------TEEEEEEEECCS
T ss_pred             ceEEEEEEEeCCHHHHHHHHHHhCCCEEEEEEcCCCCCcceEEEEEeeC-------------------CEEEEEecCCCC
Confidence            58999999999999999999999999988764322  123445555432                   346776544221


Q ss_pred             CC---CCCCCCCCCC------CCCCCCceEEEEEeCCHHHHHHHHHhcCCEEeecCCCC-ccceEEEEECCCCcEEEEee
Q 029933          105 ES---DPDFKGYHNG------NSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGG-KLKGVAFIKDPDDYWIEIFD  174 (185)
Q Consensus       105 ~~---~~~~~~~~~~------~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~~~~-~~~~~~~~~DPdG~~iEl~~  174 (185)
                      ..   ......+...      .....++.||+|.|+|+++++++++++|+++..+|... ......++++|+|..++|++
T Consensus        91 ~~~~~~~p~~~~~~~~~~~~~~~hg~gv~~iAf~V~Dv~~a~~~l~~~Ga~~~~~p~~~~~~~~~~~i~~~Gg~~~~lvd  170 (418)
T 1sp8_A           91 GADAATAALPSFSAAAARRFAADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPVDLGRGFRLAEVELYGDVVLRYVS  170 (418)
T ss_dssp             SCCGGGCSSTTCCHHHHHHHHHHHSSEEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEEETTEEEEEEEEETTEEEEEEE
T ss_pred             cccccccccccccchhHHHHHhhcCCeeEEEEEEeCCHHHHHHHHHHCCCEEEeccccccCceEEEEEecCCCEEEEEEc
Confidence            00   0000000000      00013789999999999999999999999998877421 11234667888899999888


Q ss_pred             cCcc
Q 029933          175 LKTI  178 (185)
Q Consensus       175 ~~~~  178 (185)
                      +...
T Consensus       171 ~~~~  174 (418)
T 1sp8_A          171 YPDG  174 (418)
T ss_dssp             CCTT
T ss_pred             cCCC
Confidence            7643

>1tsj_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, nysgxrc; 2.60A {Staphylococcus aureus subsp} SCOP: d.32.1.7

Probab=99.29  E-value=1.1e-10  Score=83.23  Aligned_cols=115  Identities=6%  Similarity=0.027  Sum_probs=72.7

Q ss_pred             eEEEEEEEeCChHHHHHHHHHhc-CCEEeeeeecCC------CceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEee
Q 029933           28 FMQQTMFRIKDPKVSLDFYSRVL-GMSLLKRLDFPE------MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTH  100 (185)
Q Consensus        28 ~i~h~~l~v~D~e~s~~FY~~~L-G~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~  100 (185)
                      ++....+.+.|.+++++||+++| |+++.....+.+      +......+..+                   ...+.+. 
T Consensus         5 ~i~p~l~~~~d~~eA~~FY~~~f~G~~~~~~~~~~~~~~~~~~~v~ha~l~~~-------------------~~~~m~~-   64 (139)
T 1tsj_A            5 KITTFLMFNNQAEEAVKLYTSLFEDSEIITMAKYGENGPGDPGTVQHSIFTLN-------------------GQVFMAI-   64 (139)
T ss_dssp             SEEEEEECSSCHHHHHHHHHHHSSSCEEEEEEECC-----CTTSEEEEEEEET-------------------TEEEEEE-
T ss_pred             ceeEEEEECCCHHHHHHHHHHHcCCCEEEEEEecCcCCCCCCCcEEEEEEEEC-------------------CEEEEEE-
Confidence            45444444559999999999999 999875432221      22222223321                   1222221 


Q ss_pred             cCCCCCCCCCCCCCCCCCCCCCceEEEEEeCC---HHHHHHHHHhcCCEEeecCCCCcc-ceEEEEECCCCcEEEEeecC
Q 029933          101 NWGTESDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGKL-KGVAFIKDPDDYWIEIFDLK  176 (185)
Q Consensus       101 ~~~~~~~~~~~~~~~~~~~~~g~~hi~~~v~d---v~~~~~~l~~~G~~~~~~~~~~~~-~~~~~~~DPdG~~iEl~~~~  176 (185)
                      ....    .   .  +    .. ..|++.|+|   +++++++|. .|+++..++.+..+ .+..+++||+|+.|+|..+.
T Consensus        65 d~~~----~---~--~----~~-~sl~~~~~d~~evd~~~~~l~-~G~~v~~p~~~~~wG~~~g~v~Dp~G~~W~i~~~~  129 (139)
T 1tsj_A           65 DANS----G---T--E----LP-ISLFVTVKDTIEMERLFNGLK-DEGAILMPKTNMPPYREFAWVQDKFGVSFQLALPE  129 (139)
T ss_dssp             C--------------------C-CCEEEECSSHHHHHHHHHHHH-TTCEEEEEEEEETTEEEEEEEECTTSCEEEEEECC
T ss_pred             CCCC----C---C--C----ce-EEEEEECCCHHHHHHHHHHHh-CCCEEeecccccCCCceEEEEECCCCCEEEEeecc
Confidence            1111    0   0  0    02 478899987   788899998 79999988866444 36899999999999999865


Q ss_pred             c
Q 029933          177 T  177 (185)
Q Consensus       177 ~  177 (185)
                      .
T Consensus       130 ~  130 (139)
T 1tsj_A          130 E  130 (139)
T ss_dssp             -
T ss_pred             c
Confidence            4

>3isq_A 4-hydroxyphenylpyruvate dioxygenase; tyrosine metabolism, DIS mutation, iron, mental retardation, metal-binding, oxidored phenylalanine catabolism; 1.75A {Homo sapiens} PDB: 1sqi_A*

Probab=99.27  E-value=2.8e-11  Score=100.13  Aligned_cols=129  Identities=13%  Similarity=0.135  Sum_probs=88.9

Q ss_pred             eeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecC-CCc-eEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCC
Q 029933           27 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFP-EMK-FSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT  104 (185)
Q Consensus        27 ~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~  104 (185)
                      ++++|+.|.|.|++++++||+++|||+++.....+ +.. ...+++..+                   ...++|.....+
T Consensus        10 ~~i~Hv~i~V~d~~~a~~fY~~~LGf~~v~~~~~e~g~r~~~~~~l~~G-------------------~i~~~L~~p~~p   70 (393)
T 3isq_A           10 LHFHSVTFWVGNAKQAASFYCSKMGFEPLAYRGLETGSREVVSHVIKQG-------------------KIVFVLSSALNP   70 (393)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEEET-------------------TEEEEEEEESST
T ss_pred             ceEeEEEEEECCHHHHHHHHHHhcCCEEEEEEcCCCCcEEEEEEEEecC-------------------CEEEEEecCCCC
Confidence            48999999999999999999999999988764322 112 123333322                   356676553222


Q ss_pred             CC--CCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCEEeecCCCC---cc-ceEEEEECCCCcEEEEeecCcc
Q 029933          105 ES--DPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGG---KL-KGVAFIKDPDDYWIEIFDLKTI  178 (185)
Q Consensus       105 ~~--~~~~~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~~~~---~~-~~~~~~~DPdG~~iEl~~~~~~  178 (185)
                      ..  -..+. ...|    .++.||+|.|+|+++++++++++|++++.+|...   .+ .....+++|.|+.+-++++..+
T Consensus        71 ~s~~~a~fl-~~hG----~Gv~~iAf~VdDvdaa~~ra~a~Ga~~v~eP~~~~~~~G~v~~a~I~~~Gd~~h~lVdr~~y  145 (393)
T 3isq_A           71 WNKEMGDHL-VKHG----DGVKDIAFEVEDCDYIVQKARERGAKIMREPWVEQDKFGKVKFAVLQTYGDTTHTLVEKMNY  145 (393)
T ss_dssp             TCHHHHHHH-HHHC----SEEEEEEEEEECHHHHHHHHHHHTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEESC
T ss_pred             CchHHHHHH-HhcC----CcEEEEEEEeCCHHHHHHHHHHCCCeEecCccccccCCceeEEEEEEeCCCcEEEEeccccC
Confidence            11  00000 0112    2789999999999999999999999999887421   12 2467789999999999987654


Q ss_pred             c
Q 029933          179 G  179 (185)
Q Consensus       179 ~  179 (185)
                      .
T Consensus       146 ~  146 (393)
T 3isq_A          146 I  146 (393)
T ss_dssp             C
T ss_pred             c
Confidence            3

>3l20_A Putative uncharacterized protein; hypothetical protein, unknown function; 2.45A {Staphylococcus aureus}

Probab=99.21  E-value=1.2e-09  Score=80.45  Aligned_cols=116  Identities=14%  Similarity=0.090  Sum_probs=78.0

Q ss_pred             EEEEEEeCChHHHHHHHHHhcCCEEeeeeecCC--------------CceEEEeeccCCCCCCCCCCccceeeecCCCcE
Q 029933           30 QQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE--------------MKFSLYFLGYEDTASAPADPVDRTVWTFGKPAT   95 (185)
Q Consensus        30 ~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   95 (185)
                      ....|.++|.+++++||+++||+++.....+.+              +......+..+                   ...
T Consensus        27 i~PyL~f~~a~eAi~FY~~vFG~~~~~~~~~~d~p~~~~~~~~~~~~g~v~hael~i~-------------------g~~   87 (172)
T 3l20_A           27 LFPYIAFENSKEALAYYEEVFGATDVKRLEVGEEQASHFGMTKEEAQEATMHAEFEVL-------------------GVK   87 (172)
T ss_dssp             EEEEEEESCHHHHHHHHHHHSCCEEEEEEECCTTTTTTTTCCHHHHHTCEEEEEEEET-------------------TEE
T ss_pred             EEEEEEECCHHHHHHHHHHHcCCEEEEEEEcccCCcccccCCcccCCCcEEEEEEEEC-------------------CEE
Confidence            567888889999999999999999776543311              22233333332                   334


Q ss_pred             EEEeecCCCCCCCCCCCCCCCCCCCCCceEEEEEe--------CCHHHHHHHHHhcC-CEEeecCCCCccc-eEEEEECC
Q 029933           96 IELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITV--------DDVYKACERFERLG-VEFAKKPDGGKLK-GVAFIKDP  165 (185)
Q Consensus        96 l~l~~~~~~~~~~~~~~~~~~~~~~~g~~hi~~~v--------~dv~~~~~~l~~~G-~~~~~~~~~~~~~-~~~~~~DP  165 (185)
                      +.+....+..       +..+     .-..+++.|        +|+++++++|.+.| +++..++.+..++ +..+++||
T Consensus        88 lm~~D~~g~~-------~~~~-----~~~sl~l~~~~~d~~~~~dvd~~~~~l~~~G~a~v~~p~~~~~wG~r~g~v~Dp  155 (172)
T 3l20_A           88 VLCSDSFGRA-------DKIN-----NGISLLIDYDVNNKEDADKVEAFYEQIKDHSSIEIELPFADQFWGGKMGVFTDK  155 (172)
T ss_dssp             EEEEECTTCC-------CCCC-----SSEEEEEEEETTCHHHHHHHHHHHHHHTTCTTCEEEEEEEECTTSSEEEEEECT
T ss_pred             EEEECCCCCC-------CCCC-----CcEEEEEEEccCccCcHHHHHHHHHHHHhCCCceEecCccccCCCcEEEEEECC
Confidence            5554322110       1111     224677777        57999999999999 7999888665444 67889999


Q ss_pred             CCcEEEEeecC
Q 029933          166 DDYWIEIFDLK  176 (185)
Q Consensus       166 dG~~iEl~~~~  176 (185)
                      +|+.|+|....
T Consensus       156 fG~~W~i~~~~  166 (172)
T 3l20_A          156 YGVRWMLHGQD  166 (172)
T ss_dssp             TSCEEEEEEEC
T ss_pred             CCCEEEEEeCC
Confidence            99999997653

>3isq_A 4-hydroxyphenylpyruvate dioxygenase; tyrosine metabolism, DIS mutation, iron, mental retardation, metal-binding, oxidored phenylalanine catabolism; 1.75A {Homo sapiens} PDB: 1sqi_A*

Probab=99.21  E-value=9.7e-11  Score=96.90  Aligned_cols=104  Identities=14%  Similarity=0.270  Sum_probs=72.0

Q ss_pred             eeEEEEEEEeCC--hHHHHHHHHHhcCCEEeeeee-----cCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEe
Q 029933           27 YFMQQTMFRIKD--PKVSLDFYSRVLGMSLLKRLD-----FPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELT   99 (185)
Q Consensus        27 ~~i~h~~l~v~D--~e~s~~FY~~~LG~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~   99 (185)
                      .+|+|+++.|.|  ++++++||+++|||++.....     .+..+.....+..+.                 +...++|.
T Consensus       172 ~~IDHv~i~V~~~~l~~a~~fY~~~lGf~~~~~~d~~~i~~~~~gl~s~~~~~~~-----------------g~v~i~L~  234 (393)
T 3isq_A          172 EMIDHIVGNQPDQEMVSASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYE-----------------ESIKMPIN  234 (393)
T ss_dssp             EEEEEEEEECCTTCHHHHHHHHHHHHCCEEEEEECTTTSBCSSCEEEEEEEECTT-----------------SSCEEEEE
T ss_pred             eEEeEEEEecCccHHHHHHHHHHHHhCCEEeccccccccccCCCcEEEEEEECCC-----------------CCEEEEEe
Confidence            479999999998  999999999999999887632     111233333443322                 24678887


Q ss_pred             ecCCCCCCCCCCCC---CCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCEEeecC
Q 029933          100 HNWGTESDPDFKGY---HNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP  151 (185)
Q Consensus       100 ~~~~~~~~~~~~~~---~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~  151 (185)
                      .+.....++....+   ..|    .|++||||.|+||.+++++|+++|+++...|
T Consensus       235 ep~~~~~~s~I~~fL~~~~G----~Gi~HiA~~~dDi~~~~~~l~~~Gv~~l~~P  285 (393)
T 3isq_A          235 EPAPGKKKSQIQEYVDYNGG----AGVQHIALKTEDIITAIRHLRERGLEFLSVP  285 (393)
T ss_dssp             EEECCSBCCHHHHHHHHHTS----SEEEEEEEEESCHHHHHHHHHHTTCCBCCCC
T ss_pred             cCCCCCCCCHHHHHHHHcCC----CCcceEEEEcCCHHHHHHHHHHcCCccCCCC
Confidence            65321111100001   112    3799999999999999999999999999866

>3e0r_A C3-degrading proteinase (CPPA protein); MCSG, PSI, SAD, structural GE protein structure initiative; 2.30A {Streptococcus pneumoniae}

Probab=99.20  E-value=5.6e-10  Score=85.83  Aligned_cols=122  Identities=15%  Similarity=0.128  Sum_probs=76.8

Q ss_pred             ceeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCC
Q 029933           26 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE  105 (185)
Q Consensus        26 ~~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~  105 (185)
                      .+...+..|+|+|.+++++||+++|||++..+..      ..+.++..+.                 ...+.|-..+...
T Consensus         8 ~~~~~~p~LrV~nr~~~~~FY~~vlG~kll~ee~------~~a~lg~~~~-----------------~~~L~lEEsp~~~   64 (244)
T 3e0r_A            8 QIVRIIPTLKANNRKLNETFYIETLGMKALLEES------AFLSLGDQTG-----------------LEKLVLEEAPSMR   64 (244)
T ss_dssp             CEEEEEEEEEESSHHHHHHHHTTTTCCEEEEECS------SEEEEECTTC-----------------CEEEEEEECCTTT
T ss_pred             ceEEEeeEEEECCHHHHHHHHHhccCcEEeeccC------cEEEeecCCC-----------------cceEEEEeCCCcc
Confidence            4566789999999999999999999999998732      2455554321                 2344444322111


Q ss_pred             CCCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCEEeecCCCCccceEEEEECCCCcEEEEeecCcccc
Q 029933          106 SDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIGK  180 (185)
Q Consensus       106 ~~~~~~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~~~~~  180 (185)
                      .        ....+...+..|++.|++-+++..-|+ ++.++... ..+..++.+|+.||+||.|||+...+..+
T Consensus        65 ~--------~~~~Glkh~a~i~i~vp~~~el~~lL~-~~~~~~~~-~~gdhgyA~yl~dPEGn~ieiyae~d~~~  129 (244)
T 3e0r_A           65 T--------RKVEGRKKLARLIVKVENPLEIEGILS-KTDSIHRL-YKGQNGYAFEIFSPEDDLILIHAEDDIAS  129 (244)
T ss_dssp             C--------BCCCSSCSEEEEEEEESSHHHHHHHHT-TCSCCSEE-EECSSSEEEEEECTTCCEEEEECCSCGGG
T ss_pred             c--------ccccccceeeeEEEEcCCHHHHHHHHh-cccccccc-cccCCcEEEEEECCCCCeEEEEEcCCHHH
Confidence            0        001122233444799999777755444 45544210 11224457999999999999998776554

>3oms_A PHNB protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, methyltransferase, GL family; 1.90A {Bacillus cereus} SCOP: d.32.1.0

Probab=99.16  E-value=1.5e-09  Score=77.28  Aligned_cols=114  Identities=5%  Similarity=0.064  Sum_probs=74.4

Q ss_pred             EEEEEeC-ChHHHHHHHHHhcC-CEEeeeeecC------CCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecC
Q 029933           31 QTMFRIK-DPKVSLDFYSRVLG-MSLLKRLDFP------EMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNW  102 (185)
Q Consensus        31 h~~l~v~-D~e~s~~FY~~~LG-~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~  102 (185)
                      ...|.++ |.+++++||+++|| .++.....+.      ++......+..+                   ...+.+....
T Consensus        12 ~P~L~f~g~a~eA~~FY~~vFg~~~i~~~~~~~~~~~~~~g~v~ha~l~i~-------------------g~~lm~~d~~   72 (138)
T 3oms_A           12 TTFLMFEGKAEEAMNFYTSLFDQSEIVSISRYDENGPGKEGTVIHATFTLN-------------------GQEFMCIDSY   72 (138)
T ss_dssp             CEEEEESSCHHHHHHHHHTTSTTCCEEEEEECCTTCSSCTTSEEEEEEEET-------------------TEEEEEEECS
T ss_pred             EEEEEECCCHHHHHHHHHHHcCCceEEEEEecCCCCCCCCCcEEEEEEEEC-------------------CEEEEEEcCC
Confidence            4567777 89999999999999 5665432221      223333344332                   2344443221


Q ss_pred             CCCCCCCCCCCCCCCCCCCCceEEEEEeCC---HHHHHHHHHhcCCEEeecCCCCccc-eEEEEECCCCcEEEEeec
Q 029933          103 GTESDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIFDL  175 (185)
Q Consensus       103 ~~~~~~~~~~~~~~~~~~~g~~hi~~~v~d---v~~~~~~l~~~G~~~~~~~~~~~~~-~~~~~~DPdG~~iEl~~~  175 (185)
                      ..   ..   +..+     .-.+|++.|+|   +++++++|. .|.++..++.+..++ +..+++||+|+.|.|...
T Consensus        73 ~~---~~---~~~~-----~~~~l~l~~~d~~evd~~~~~l~-~Gg~v~~p~~~~~wg~~~~~~~Dp~G~~W~i~~~  137 (138)
T 3oms_A           73 VN---HN---FTFT-----PAMSLYVTCETEEEIDTVFHKLA-QDGAILMPLGSYPFSKKFGWLNDKYGVSWQLTLA  137 (138)
T ss_dssp             SC---CS---CCCC-----TTSCEEEEESSHHHHHHHHHHHH-TTCEEEEEEEEETTEEEEEEEECTTSCEEEEEEC
T ss_pred             CC---CC---CCCC-----CCEEEEEEcCCHHHHHHHHHHHH-cCCeEecCcccccCCcEEEEEECCCCCEEEEEeC
Confidence            11   00   1111     12478999999   999999995 688998888665444 678899999999998653

>1cjx_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase, iron; 2.40A {Pseudomonas fluorescens} SCOP: d.32.1.3 d.32.1.3

Probab=99.12  E-value=6.2e-10  Score=90.90  Aligned_cols=120  Identities=15%  Similarity=0.130  Sum_probs=80.5

Q ss_pred             eeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCC
Q 029933           27 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  106 (185)
Q Consensus        27 ~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~  106 (185)
                      .+++|+.|.|+|++++.+|| +.|||+++.+..  ...  .+++..+                   ...+.+...  ...
T Consensus        11 ~~l~hV~~~V~D~~~~~~fy-~~LGf~~~~~~~--~~~--~~l~~~g-------------------~~~l~l~~~--~~~   64 (357)
T 1cjx_A           11 MGFEFIEFASPTPGTLEPIF-EIMGFTKVATHR--SKN--VHLYRQG-------------------EINLILNNE--PNS   64 (357)
T ss_dssp             EEEEEEEEECSSTTSSHHHH-HHTTCEEEEEES--SSS--EEEEEET-------------------TEEEEEECC--SSS
T ss_pred             ceEEEEEEEeCCHHHHHHHH-HHCCCEEEEEeC--Cee--EEEEecC-------------------CEEEEEECC--CCc
Confidence            48999999999999999999 799999887632  212  2222221                   233444321  110


Q ss_pred             C-CCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCEEeecCCCCccceEEEEECCCCcEEEEeecCc
Q 029933          107 D-PDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKT  177 (185)
Q Consensus       107 ~-~~~~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~~  177 (185)
                      . ..+. ...+    .++.|++|.|+|+++++++++++|+++...+..........+++|+|..++++++..
T Consensus        65 ~~~~~~-~~~g----~gv~~iaf~V~D~~~~~~~l~~~G~~~~~~~~~~g~~~~~~~~~~gg~~~~~vd~~~  131 (357)
T 1cjx_A           65 IASYFA-AEHG----PSVCGMAFRVKDSQKAYNRALELGAQPIHIDTGPMELNLPAIKGIGGAPLYLIDRFG  131 (357)
T ss_dssp             HHHHHH-HHHS----SEEEEEEEEESCHHHHHHHHHHTTCCBCCCCCCTTCBCCCEEECGGGCEEEEECCCS
T ss_pred             hhhhhh-hhcC----CeEEEEEEEeCCHHHHHHHHHHcCCEEeecCCCCCcEEEEeeeCCCCeEEEEECCCC
Confidence            0 0000 0111    378999999999999999999999998776643211234678899999999988654

>1u69_A Hypothetical protein; structural genomics, MSCG, pseudomonas aeruginosa PAO1, HYPO protein, protein structure initiative (PSI); 1.60A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=98.22  E-value=8.9e-05  Score=53.84  Aligned_cols=105  Identities=11%  Similarity=0.051  Sum_probs=67.3

Q ss_pred             EEEEEeC-ChHHHHHHHHHhc-CCEEeeeeecC-------CCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeec
Q 029933           31 QTMFRIK-DPKVSLDFYSRVL-GMSLLKRLDFP-------EMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHN  101 (185)
Q Consensus        31 h~~l~v~-D~e~s~~FY~~~L-G~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~  101 (185)
                      ...|..+ |.+++++||+++| |.++......+       ++......+..+                   +..+.+...
T Consensus         8 ~PyL~f~g~a~eAi~FY~~vF~ga~i~~~~~~~~~~~~~~~g~Vmhael~i~-------------------g~~~m~~d~   68 (163)
T 1u69_A            8 TICLWYDSAALEAATFYAETFPDSAVLAVHRAPGDYPSGKEGDVLTVEFRVM-------------------GIPCLGLNG   68 (163)
T ss_dssp             EEEEEESSCHHHHHHHHHHHSTTEEEEEEEECSSCBTTBCTTSEEEEEEEET-------------------TEEEEEEEC
T ss_pred             eEEEEECCCHHHHHHHHHHHhCCCEEeEEEeccCCCCCCCCCeEEEEEEEEC-------------------CEEEEEECC
Confidence            4567777 9999999999999 99887532221       223333344432                   233444321


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCceEEEEEeCC---HHHHHHHHHhcCCEEeecCCCCccceEEEEECCCCcEEEEeecC
Q 029933          102 WGTESDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLK  176 (185)
Q Consensus       102 ~~~~~~~~~~~~~~~~~~~~g~~hi~~~v~d---v~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~  176 (185)
                       .+    .   +...    .+ .+|++.|+|   ++.++++|.+.|.++.      .+   -.++||.|+.|.|..+.
T Consensus        69 -~p----~---~~~~----~~-~sl~v~~~d~~e~d~~~~~L~~~Gg~v~------~~---G~v~D~fGv~W~i~~~~  124 (163)
T 1u69_A           69 -GP----A---FRHS----EA-FSFQVATDDQAETDRLWNAIVDNGGEES------AC---GWCRDKWGISWQITPRV  124 (163)
T ss_dssp             -CT----T---CCCC----TT-EEEEEEESSHHHHHHHHHHHHHTTCEEC------ST---TEEECTTSCEEEEEEHH
T ss_pred             -CC----C---cCCC----Cc-eEEEEEeCCHHHHHHHHHHHHhCCCEEE------EE---EEEECCCCCEEEEEeEc
Confidence             11    1   1111    12 378899987   7778899987888877      22   36899999999998753

>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}

Probab=97.90  E-value=3.2e-05  Score=69.58  Aligned_cols=53  Identities=15%  Similarity=0.149  Sum_probs=43.6

Q ss_pred             eEEEEEeCCHHHHHHHHHhcCCEEeecCCCCccceEEEEECCCCcEEEEeecCc
Q 029933          124 GHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKT  177 (185)
Q Consensus       124 ~hi~~~v~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~~  177 (185)
                      .|++|.+.|++++.+.|.+.+.++...|..... ..+|+.||+||+|+|-+...
T Consensus        96 ~~l~f~~~dL~~~~~~L~~~~~~~Q~~ps~~~~-~e~yt~DPlGNvIgfs~~~~  148 (941)
T 3opy_B           96 SNIAFKSSSLSKLVKLLKDGGHPVQQSPNEISP-FEVYTVDPLGSLIGFSGFKN  148 (941)
T ss_dssp             CEEEEEESCHHHHHHHHHTTTCCCBCSSSSCSC-EEECCSSCCEEEECC-CCSS
T ss_pred             ceEEEEeCCHHHHHHHHHhcCCccccCCCcCCC-ceEEeECCCCCEEEEeccCC
Confidence            499999999999999999999988777653222 36999999999999988664

>3p8a_A Uncharacterized protein; mainly antiparallel beta sheets, alpha and beta protein, UNK function; HET: MSE BTB PG4; 1.95A {Staphylococcus aureus}

Probab=97.02  E-value=0.0021  Score=50.38  Aligned_cols=100  Identities=13%  Similarity=0.014  Sum_probs=60.3

Q ss_pred             CCCceeEEEEEEEeCChHHHHHHHHHhcC-----CEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEE
Q 029933           23 ATNGYFMQQTMFRIKDPKVSLDFYSRVLG-----MSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIE   97 (185)
Q Consensus        23 ~~~~~~i~h~~l~v~D~e~s~~FY~~~LG-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   97 (185)
                      ..+.++++|+.+.|.+++        .||     |.+.....-+..+..-..+.++                   ...||
T Consensus        19 ~~M~~~lDHlVi~v~~l~--------~lG~~~~~f~~~~GG~H~~~GT~N~Li~fd-------------------g~YLE   71 (274)
T 3p8a_A           19 SHMILKFDHIIHYIDQLD--------RFSFPGDVIKLHSGGYHHKYGTFNKLGYIN-------------------ENYIE   71 (274)
T ss_dssp             --CCCEEEEEEEECTTGG--------GCCCGGGSSCCEEEEEETTTTEEEEEEECS-------------------SSEEE
T ss_pred             cCccccCCEEEEEeccHH--------HcCCccceEEeCCCccCCCCCCEEEEEeeC-------------------CEEEE
Confidence            456679999999999884        467     7766543222222222222222                   57899


Q ss_pred             EeecCCCCCCC-----CCCCCCCC-----CCCCCCceEEEEEeCCHHHHHHHHHhcCCEEee
Q 029933           98 LTHNWGTESDP-----DFKGYHNG-----NSEPRGFGHIGITVDDVYKACERFERLGVEFAK  149 (185)
Q Consensus        98 l~~~~~~~~~~-----~~~~~~~~-----~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~  149 (185)
                      |+...+.....     +...+..+     .....|+.++++.++|+++..++|+++|+.+..
T Consensus        72 lIai~~~~~~~~~~~~~~~~~~f~~~~~~~~~geGl~~~alrt~Di~a~~a~l~~~Gl~~~~  133 (274)
T 3p8a_A           72 LLDVENNEKLKKMAKTIEGGVAFATQIVQEKYEQGFKNICLHTNDIEAVKNKLQSEQVEVVG  133 (274)
T ss_dssp             EEEESCHHHHHHHTTSTGGGTCTTTHHHHTTTCCEEEEEEEECSCHHHHHHHHHTTTCEEEE
T ss_pred             EEeecCcccccccccccCccchHHHHhhhhccCCCeEEEEEecCCHHHHHHHHHHcCCCcCC
Confidence            98764421000     00000111     112348999999999999999999999987653

>3e0r_A C3-degrading proteinase (CPPA protein); MCSG, PSI, SAD, structural GE protein structure initiative; 2.30A {Streptococcus pneumoniae}

Probab=96.69  E-value=0.0054  Score=47.06  Aligned_cols=47  Identities=15%  Similarity=0.162  Sum_probs=34.2

Q ss_pred             CceEEEEEeC--CHHHHHHHHHhcCCEEeecCCCCccceEEEEECCCCcEEEEee
Q 029933          122 GFGHIGITVD--DVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFD  174 (185)
Q Consensus       122 g~~hi~~~v~--dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~  174 (185)
                      ++-.+.|.|+  |+.++.++|++.|..+...      ...+.+.||.|+.|-+.+
T Consensus       195 gLe~l~~~v~~~dl~~l~~~L~~~g~~idkk------~~~l~~~DpsgIeiwF~~  243 (244)
T 3e0r_A          195 DLSMLKFLVNELDIASLRQKFESTEYFIPKS------EKFFLGKDRNNVELWFEE  243 (244)
T ss_dssp             SEEEEEEEESSCCHHHHHHHTTTSCEECCTT------CCEEEEECTTSCEEEEEE
T ss_pred             CceEEEEEeCHHHHHHHHHHHHhCCceEccc------CCEEEEECCCCCEEEEEE
Confidence            5567777776  5889999999887732221      235789999999987764

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A*

Probab=96.64  E-value=0.031  Score=43.05  Aligned_cols=119  Identities=19%  Similarity=0.201  Sum_probs=72.2

Q ss_pred             eEEEEEEEeC--ChHHHHHHHHHhcCCEEeee-e----ecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEee
Q 029933           28 FMQQTMFRIK--DPKVSLDFYSRVLGMSLLKR-L----DFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTH  100 (185)
Q Consensus        28 ~i~h~~l~v~--D~e~s~~FY~~~LG~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~  100 (185)
                      .+.|+++.|.  ++++..+..++.  ..+... .    .........+++..++                  +..+|++.
T Consensus        80 ~~~hiaf~V~~~dld~~~~rL~~~--v~~~~~~~~~~~~~~~~g~~~~~f~DPd------------------Gn~iEl~~  139 (252)
T 3pkv_A           80 PFYHIAINIAANHFQEGKAWLSGF--GELLTENDEDQAYFPFFNAYSCYVEDPS------------------GNIIELIS  139 (252)
T ss_dssp             CCCEEEEEECTTCHHHHHHHHTTS--SCCCCBTTBSCEEETTTTEEEEEEECTT------------------CCEEEEEE
T ss_pred             CeeEEEEEecHHHHHHHHHHHHhc--ceEeccCCccccccccCCeEEEEEECCC------------------CCEEEEEE
Confidence            4789999886  456665555543  333220 0    0012223456666554                  57899987


Q ss_pred             cCCCCCCCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCEEeecCCCCccceEEEEECCCCcEEEE
Q 029933          101 NWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEI  172 (185)
Q Consensus       101 ~~~~~~~~~~~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl  172 (185)
                      ...... ....++.  .....++.|+.+.|+|++++.+.+...|++......+  .....+.-| +|.+|.+
T Consensus       140 ~~~~~~-~~~~~~~--~~~i~glghV~L~v~d~~~~~~fl~~LG~~~~~~~~~--~~~f~~~G~-~g~~i~v  205 (252)
T 3pkv_A          140 RQQAAP-VLDKPFS--ADQLLSIGEINITTSDVEQAATRLKQAELPVKLDQIE--PAGLNFIGD-QDLFLLL  205 (252)
T ss_dssp             ESSSSC-CCCSCCC--GGGCCEEEEEEEECSCHHHHHHHHHHTTCCCCGGGCC--TTSCEEEEE-TTEEEEE
T ss_pred             eCCCCc-cccCCCC--HHHCcEeeeEEEEeCCHHHHHHHHHHcCCCcccCCCC--hheEEEcCC-CcEEEEE
Confidence            543221 1111121  2346789999999999999999998889987765322  223456677 7777776

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A

Probab=95.23  E-value=0.091  Score=35.20  Aligned_cols=56  Identities=21%  Similarity=0.318  Sum_probs=40.3

Q ss_pred             CCceEEEEEeCCHHHHHHHHHhcCCEEeecCC--CCccceEEEEECCCCcEEEEeecCc
Q 029933          121 RGFGHIGITVDDVYKACERFERLGVEFAKKPD--GGKLKGVAFIKDPDDYWIEIFDLKT  177 (185)
Q Consensus       121 ~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~~--~~~~~~~~~~~DPdG~~iEl~~~~~  177 (185)
                      ..+.|+++.|+|++++.+.+...|+++.....  .......+++.. ++..|||+++..
T Consensus         6 ~~i~hv~i~v~Dl~~a~~FY~~lG~~~~~~~~~~~~~~~~~~~~~~-~~~~l~l~~~~~   63 (133)
T 3hdp_A            6 LKVHHIGYAVKNIDSALKKFKRLGYVEESEVVRDEVRKVYIQFVIN-GGYRVELVAPDG   63 (133)
T ss_dssp             CCEEEEEEECSCHHHHHHHHHHTTCEECSCCEEETTTTEEEEEEEE-TTEEEEEEEESS
T ss_pred             eeeCEEEEEECCHHHHHHHHHHcCCeeecceeccCCcceEEEEEeC-CCEEEEEEecCC
Confidence            37799999999999999999988998865421  112223445443 678899998654

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}

Probab=94.84  E-value=0.14  Score=35.06  Aligned_cols=57  Identities=21%  Similarity=0.262  Sum_probs=43.0

Q ss_pred             CCceEEEEEeCCHHHHHHHHHh-cCCEEeecCCCC-------ccceEEEEECCCCcEEEEeecCc
Q 029933          121 RGFGHIGITVDDVYKACERFER-LGVEFAKKPDGG-------KLKGVAFIKDPDDYWIEIFDLKT  177 (185)
Q Consensus       121 ~g~~hi~~~v~dv~~~~~~l~~-~G~~~~~~~~~~-------~~~~~~~~~DPdG~~iEl~~~~~  177 (185)
                      .++.||++.|.|++++.+.+.+ .|.++.......       ..+..+++.-.+|..|+|++...
T Consensus        18 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~   82 (156)
T 3kol_A           18 RKVHHIALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASGKVANFITPDGTILDLFGEPE   82 (156)
T ss_dssp             CCCCEEEEEESCHHHHHHHHTTTSCCEECCTTTSCTTTHHHHHTTSEEEEECTTSCEEEEEECTT
T ss_pred             ceEeEEEEEeCCHHHHHHHHHhhcCCEEEeecccCcchhcccCCCcEEEEEeCCCCEEEEEecCC
Confidence            4789999999999999999987 799987632110       12234677777889999998754

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} SCOP: d.32.1.0

Probab=94.61  E-value=0.075  Score=35.26  Aligned_cols=55  Identities=20%  Similarity=0.291  Sum_probs=38.9

Q ss_pred             CceEEEEEeCCHHHHHHHHHh-cCCEEeecCCCCc-cceEEEEECCCCcEEEEeecCc
Q 029933          122 GFGHIGITVDDVYKACERFER-LGVEFAKKPDGGK-LKGVAFIKDPDDYWIEIFDLKT  177 (185)
Q Consensus       122 g~~hi~~~v~dv~~~~~~l~~-~G~~~~~~~~~~~-~~~~~~~~DPdG~~iEl~~~~~  177 (185)
                      .+.|+++.|+|++++.+.+.+ .|.++........ ....+++. .++..+++++...
T Consensus         5 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~   61 (134)
T 3rmu_A            5 RLNHVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVN-LGNTKMELLHPLG   61 (134)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHTSCCEECCCEEEGGGTEEEEEEE-CSSSEEEEEEECS
T ss_pred             eeeeEEEEeCCHHHHHHHHHHhcCCEEeEeeecCCCCEEEEEEe-cCCEEEEEEecCC
Confidence            578999999999999999988 8998765321111 12234444 4678899988543

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans}

Probab=93.92  E-value=0.11  Score=36.46  Aligned_cols=55  Identities=20%  Similarity=0.279  Sum_probs=39.4

Q ss_pred             CceEEEEEeCCHHHHHHHHHh-cCCEEeecCCC-CccceEEEEECCCCcEEEEeecCc
Q 029933          122 GFGHIGITVDDVYKACERFER-LGVEFAKKPDG-GKLKGVAFIKDPDDYWIEIFDLKT  177 (185)
Q Consensus       122 g~~hi~~~v~dv~~~~~~l~~-~G~~~~~~~~~-~~~~~~~~~~DPdG~~iEl~~~~~  177 (185)
                      ++.||++.|+|++++.+.+.+ .|+++...... ......+++.. ++..|||++...
T Consensus         8 ~i~Hv~l~V~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~-g~~~l~l~~~~~   64 (161)
T 3oa4_A            8 KLDHIGIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQGVKIAFLEI-GESKIELLEPLS   64 (161)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEEGGGTEEEEEEEE-TTEEEEEEEESS
T ss_pred             cCCEEEEEECCHHHHHHHHHHccCCeEeeeeccCCCCeEEEEEeC-CCeEEEEEeECC
Confidence            779999999999999999987 89988654221 11123445443 567899998654

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6

Probab=93.85  E-value=0.19  Score=34.30  Aligned_cols=54  Identities=22%  Similarity=0.457  Sum_probs=39.6

Q ss_pred             CceEEEEEeCCHHHHHHHHHhcCCEEeecCC------------CCccceEEEEECCCC-cEEEEeec
Q 029933          122 GFGHIGITVDDVYKACERFERLGVEFAKKPD------------GGKLKGVAFIKDPDD-YWIEIFDL  175 (185)
Q Consensus       122 g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~~------------~~~~~~~~~~~DPdG-~~iEl~~~  175 (185)
                      .+.|+.+.|+|++++.+.+.+.|+++.....            .......+++.-++| ..|||++.
T Consensus        11 ~i~hv~l~v~D~~~a~~FY~~lG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~l~l~~~   77 (153)
T 1ss4_A           11 RMDNVSIVVESLDNAISFFEEIGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHSRIELSRF   77 (153)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTSSCEEEEEEE
T ss_pred             ceeeEEEEeCCHHHHHHHHHHCCCEEEeeccCCcchhheeeCCCCCcEEEEEEECCCCCcEEEEEEe
Confidence            6689999999999999999889998874321            011223566776666 79999875

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis}

Probab=93.34  E-value=0.16  Score=35.24  Aligned_cols=57  Identities=21%  Similarity=0.257  Sum_probs=39.1

Q ss_pred             CCCceEEEEEeCCHHHHHHHHHh-cCCEEeecCCC---------------CccceEEEEECCCCcEEEEeecCc
Q 029933          120 PRGFGHIGITVDDVYKACERFER-LGVEFAKKPDG---------------GKLKGVAFIKDPDDYWIEIFDLKT  177 (185)
Q Consensus       120 ~~g~~hi~~~v~dv~~~~~~l~~-~G~~~~~~~~~---------------~~~~~~~~~~DPdG~~iEl~~~~~  177 (185)
                      ..++.||++.|+|++++.+.+.+ .|+++......               ......+++. -.+..|||++...
T Consensus        17 ~~~i~Hv~i~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~g~~~leL~~~~~   89 (159)
T 3gm5_A           17 MRNTVQIGIVVRDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAKLAFFE-LGPLQLELIEPDE   89 (159)
T ss_dssp             GGGCEEEEEECSCHHHHHHHHHHHTTCCCCCCEECCCHHHHCCEETTEECCCCEEEEEEE-ETTEEEEEEEECS
T ss_pred             cccccEEEEEeCCHHHHHHHHHHhhCCCCceEEecCCcccccceeecccccceEEEEEEe-cCCEEEEEEEECC
Confidence            34789999999999999999986 89876532110               0112334444 3578999998754

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans}

Probab=93.26  E-value=0.17  Score=33.39  Aligned_cols=52  Identities=25%  Similarity=0.311  Sum_probs=37.1

Q ss_pred             CceEEEEEeCCHHHHHHHHHh-cCCEEeecCCC-CccceEEEEECCCCcEEEEee
Q 029933          122 GFGHIGITVDDVYKACERFER-LGVEFAKKPDG-GKLKGVAFIKDPDDYWIEIFD  174 (185)
Q Consensus       122 g~~hi~~~v~dv~~~~~~l~~-~G~~~~~~~~~-~~~~~~~~~~DPdG~~iEl~~  174 (185)
                      ++.||++.|+|++++.+.+.+ .|.++...... ......+++.. ++..++|++
T Consensus         5 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~-~~~~l~l~~   58 (134)
T 3l7t_A            5 AVHHVALIVSDYDKSYEFYVNQLGFEVIRENHRPKRHDYKLDLKC-GDIELEIFG   58 (134)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEETTTTEEEEEEEE-TTEEEEEEE
T ss_pred             eEeEEEEEeCCHHHHHHHHHHhcCCEEEEEeecCCCcceEEEEec-CCeEEEEEe
Confidence            678999999999999999976 89988754321 11222355554 455899988

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2

Probab=93.20  E-value=0.51  Score=30.39  Aligned_cols=52  Identities=27%  Similarity=0.486  Sum_probs=39.2

Q ss_pred             CceEEEEEeCCHHHHHHHHHh-cCCEEeecCCCCccceEEEEECCCCcEEEEeecCc
Q 029933          122 GFGHIGITVDDVYKACERFER-LGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKT  177 (185)
Q Consensus       122 g~~hi~~~v~dv~~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~~  177 (185)
                      .+.|+.+.|+|+++..+.+.+ .|.++.....  .  ..+++..++|..|++++...
T Consensus         3 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~--~--~~~~~~~~~~~~l~l~~~~~   55 (113)
T 1xqa_A            3 GIKHLNLTVADVVAAREFLEKYFGLTCSGTRG--N--AFAVMRDNDGFILTLMKGKE   55 (113)
T ss_dssp             CCCEEEEEESCHHHHHHHHHHHHCCEEEEEET--T--TEEEEECTTCCEEEEEECSS
T ss_pred             eeEEEEEEeCCHHHHHHHHHHhCCCEEeccCC--C--cEEEEEcCCCcEEEEEeCCC
Confidence            568999999999999999976 8998875421  1  23566666788898887543

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A

Probab=92.81  E-value=0.33  Score=32.84  Aligned_cols=56  Identities=7%  Similarity=0.122  Sum_probs=40.4

Q ss_pred             CceEEEEEeCCHHHHHHHHHh-cCCEEeecCCC-CccceEEEEECCCC-----cEEEEeecCc
Q 029933          122 GFGHIGITVDDVYKACERFER-LGVEFAKKPDG-GKLKGVAFIKDPDD-----YWIEIFDLKT  177 (185)
Q Consensus       122 g~~hi~~~v~dv~~~~~~l~~-~G~~~~~~~~~-~~~~~~~~~~DPdG-----~~iEl~~~~~  177 (185)
                      .+.|+.+.|.|++++.+.+.+ .|+++...... ......+++..+++     ..|+|++...
T Consensus         9 ~~~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~l~~~~~   71 (148)
T 1jc4_A            9 CIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLN   71 (148)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEESS
T ss_pred             eeeEEEEEeCCHHHHHHHHHHccCceeeecccCCCCCeEEEEEEcCCCCcCcceEEEEeecCC
Confidence            678999999999999999974 79988754211 11123466776665     7899998653

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP}

Probab=92.45  E-value=0.37  Score=32.34  Aligned_cols=54  Identities=17%  Similarity=0.284  Sum_probs=38.0

Q ss_pred             CceEEEEEeCCHHHHHHHHHh-cCCEEeecCCCCccc-eEEEEECCCCcEEEEeecCc
Q 029933          122 GFGHIGITVDDVYKACERFER-LGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIFDLKT  177 (185)
Q Consensus       122 g~~hi~~~v~dv~~~~~~l~~-~G~~~~~~~~~~~~~-~~~~~~DPdG~~iEl~~~~~  177 (185)
                      ++.|+++.|+|++++.+.+.+ .|+++.......... ..+++ . ++..|+|++...
T Consensus         5 ~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~-~-~~~~l~l~~~~~   60 (136)
T 2rk0_A            5 GVSHVSLTVRDLDISCRWYTEILDWKELVRGRGDTTSFAHGVL-P-GGLSIVLREHDG   60 (136)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEEEEEEECSSEEEEEEEC-T-TSCEEEEEEETT
T ss_pred             cccEEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCceEEEEE-c-CCCEEEEEeCCC
Confidence            568999999999999999976 799887543222111 22343 4 788999988643

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium}

Probab=92.23  E-value=0.83  Score=31.03  Aligned_cols=55  Identities=13%  Similarity=0.157  Sum_probs=39.3

Q ss_pred             CCCceEEEEEeCCHHHHHHHHHh-cCCEEeecCCCCccceEEEEECCCCcEEEEeecC
Q 029933          120 PRGFGHIGITVDDVYKACERFER-LGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLK  176 (185)
Q Consensus       120 ~~g~~hi~~~v~dv~~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~  176 (185)
                      ..++.||++.|.|+++..+.+.+ .|+++.........  .++..+..+..|+|++..
T Consensus        26 i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~--~~~~~~~~~~~l~l~~~~   81 (141)
T 3ghj_A           26 IKGLFEVAVKVKNLEKSSQFYTEILGFEAGLLDSARRW--NFLWVSGRAGMVVLQEEK   81 (141)
T ss_dssp             CCCCCEEEEEESCHHHHHHHHHHTSCCEEEEEETTTTE--EEEEETTTTEEEEEEECC
T ss_pred             eceecEEEEEeCCHHHHHHHHHHhcCCEEEEecCCCcE--EEEEecCCCcEEEEeccC
Confidence            34789999999999999999965 79988765422221  233334457889988864

>1k4n_A Protein EC4020, protein YECM; structural genomics, A NEW fold of protein, PSI, protein structure initiative; 1.60A {Escherichia coli} SCOP: d.32.1.5

Probab=91.61  E-value=1.8  Score=31.73  Aligned_cols=32  Identities=6%  Similarity=-0.045  Sum_probs=27.2

Q ss_pred             CceeEEEEEEEeCChHHHHHHHHHhcCCEEee
Q 029933           25 NGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLK   56 (185)
Q Consensus        25 ~~~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~   56 (185)
                      ..+.++|++++|.+.+.+.+|-+.++.+-...
T Consensus        40 ~~~~~DHIalRvn~~~~Ae~~~~~l~~~G~ll   71 (192)
T 1k4n_A           40 TPLTADHISLRCHQNATAERWRRGFEQCGELL   71 (192)
T ss_dssp             TTCEEEEEEEECSCHHHHHHHHHHHTTTEEEE
T ss_pred             hhccCcEEEEecCCHHHHHHHHHHHHHhchhh
Confidence            45689999999999999999999998875443

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}

Probab=91.57  E-value=0.54  Score=30.78  Aligned_cols=56  Identities=13%  Similarity=0.118  Sum_probs=40.2

Q ss_pred             CceEEEEEeCCHHHHHHHHH-hcCCEEeecCCC-CccceEEEEECCCCcEEEEeecCc
Q 029933          122 GFGHIGITVDDVYKACERFE-RLGVEFAKKPDG-GKLKGVAFIKDPDDYWIEIFDLKT  177 (185)
Q Consensus       122 g~~hi~~~v~dv~~~~~~l~-~~G~~~~~~~~~-~~~~~~~~~~DPdG~~iEl~~~~~  177 (185)
                      .+.|+++.|.|++++.+.+. ..|.++...... ......+|+..++|..|+|++...
T Consensus         3 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~   60 (127)
T 3e5d_A            3 KIEHVALWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSFEDGARLEIMSRTD   60 (127)
T ss_dssp             CCCEEEEECSSHHHHHHHHHHHHCCEECCCEEEGGGTEEEEEEECSSSCEEEEEEETT
T ss_pred             EEEEEEEEECCHHHHHHHHHHhcCCeeecccccCCCCccEEEEEcCCCcEEEEEecCC
Confidence            45799999999999999995 469987654211 111234666766789999998654

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A

Probab=90.69  E-value=1.2  Score=29.32  Aligned_cols=54  Identities=17%  Similarity=0.246  Sum_probs=37.6

Q ss_pred             CceEEEEEeCCHHHHHHHHHh-cCCEEeecCC-CCccceEEEEECCC---CcEEEEeec
Q 029933          122 GFGHIGITVDDVYKACERFER-LGVEFAKKPD-GGKLKGVAFIKDPD---DYWIEIFDL  175 (185)
Q Consensus       122 g~~hi~~~v~dv~~~~~~l~~-~G~~~~~~~~-~~~~~~~~~~~DPd---G~~iEl~~~  175 (185)
                      .+.|+++.|.|+++..+.+.+ .|.++..... .......+++.-.+   +..|++.+.
T Consensus         2 ~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~   60 (135)
T 1f9z_A            2 RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYN   60 (135)
T ss_dssp             CEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESSCTTTSCEEEEEEE
T ss_pred             cceEEEEEeCCHHHHHHHHHhccCcEEEEecccCCCceEEEEEecCCCCCCcEEEEEEc
Confidence            458999999999999999986 8998875431 11111234555444   688999864

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis}

Probab=90.48  E-value=0.54  Score=30.61  Aligned_cols=54  Identities=19%  Similarity=0.151  Sum_probs=36.9

Q ss_pred             CceEEEEEeCCHHHHHHHHHh-cCCEEeecCC-CCccceEEEEECCCCcEEEEeecC
Q 029933          122 GFGHIGITVDDVYKACERFER-LGVEFAKKPD-GGKLKGVAFIKDPDDYWIEIFDLK  176 (185)
Q Consensus       122 g~~hi~~~v~dv~~~~~~l~~-~G~~~~~~~~-~~~~~~~~~~~DPdG~~iEl~~~~  176 (185)
                      .+.|+++.|+|+++..+.+.+ .|.++..... .......+++.-+++ .|+|++..
T Consensus         5 ~i~hi~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~-~l~l~~~~   60 (126)
T 2p25_A            5 EIHHVAINASNYQATKNFYVEKLGFEVLRENHRPEKNDIKLDLKLGSQ-ELEIFISD   60 (126)
T ss_dssp             CCCCEEEEESCHHHHHHHHTTTTCCEEEEEEEEGGGTEEEEEEEETTE-EEEEEECT
T ss_pred             ccceEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCcceEEEEecCCe-EEEEEecc
Confidence            568999999999999999976 8998875321 111112244454555 89998753

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A*

Probab=90.28  E-value=0.58  Score=31.46  Aligned_cols=51  Identities=18%  Similarity=0.214  Sum_probs=36.8

Q ss_pred             CceEEEEEeCCHHHHHHHHHhcCCEEeecCCCCccceEEEEECCCCcEEEEeec
Q 029933          122 GFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDL  175 (185)
Q Consensus       122 g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~  175 (185)
                      .+.|+.+.|+|++++.+.+.+.|.++.......   ..+.+.-++|..|++++.
T Consensus         4 ~l~hv~l~v~D~~~a~~FY~~LG~~~~~~~~~~---~~~~~~~~~~~~l~l~~~   54 (138)
T 2a4x_A            4 RISLFAVVVEDMAKSLEFYRKLGVEIPAEADSA---PHTEAVLDGGIRLAWDTV   54 (138)
T ss_dssp             EEEEEEEEESCHHHHHHHHHTTTCCCCGGGGGC---SEEEEECTTSCEEEEEEH
T ss_pred             eeeEEEEEECCHHHHHHHHHHcCCcEEecCCCC---ceEEEEcCCCeEEEEecC
Confidence            568999999999999999988888776543111   123444467888988863

>4hc5_A Glyoxalase/bleomycin resistance protein/dioxygena; MCSG, GEBA genomes, structural genomics, midwest center for structural genomics; HET: MSE GOL; 1.45A {Sphaerobacter thermophilus}

Probab=89.56  E-value=1.1  Score=29.41  Aligned_cols=56  Identities=16%  Similarity=0.012  Sum_probs=38.1

Q ss_pred             CCceEEEEEeCCHHHHHHHHH-hcCCEEeecCCCCccceEEEEECCC-CcEEEEeecC
Q 029933          121 RGFGHIGITVDDVYKACERFE-RLGVEFAKKPDGGKLKGVAFIKDPD-DYWIEIFDLK  176 (185)
Q Consensus       121 ~g~~hi~~~v~dv~~~~~~l~-~~G~~~~~~~~~~~~~~~~~~~DPd-G~~iEl~~~~  176 (185)
                      ..+.|+.+.|.|++++.+.+. ..|.++............+.+..++ +..|++.+..
T Consensus        12 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~   69 (133)
T 4hc5_A           12 AYVHSATIIVSDQEKALDFYVNTLGFEKVFDNQLDPNMRFVTVVPPGAQTQVALGLPS   69 (133)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEETTEEEEEEECTTCSCEEEEECGG
T ss_pred             cceeEEEEEECCHHHHHHHHHhCcCCcEeeecccCCCceEEEEECCCCceEEEEecCc
Confidence            377999999999999999996 4899887643211112234455444 4568887754

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}

Probab=88.75  E-value=1  Score=30.09  Aligned_cols=52  Identities=10%  Similarity=0.116  Sum_probs=35.2

Q ss_pred             CceEEEEEeCCHHHHHHHHHhcCCEEeecCCCCccceEEEEECCCCcEEEEeec
Q 029933          122 GFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDL  175 (185)
Q Consensus       122 g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~  175 (185)
                      .+.||++.|.|+++..+...+.|.++...... . +..+++...+|..++|...
T Consensus         6 ~i~hv~l~v~D~~~a~~FY~~LG~~~~~~~~~-~-~~~~~~~~~~~~~l~l~~~   57 (128)
T 3g12_A            6 LITSITINTSHLQGMLGFYRIIGFQFTASKVD-K-GSEVHRAVHNGVEFSLYSI   57 (128)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHHTCCCEEC-------CCEEEEEETTEEEEEEEC
T ss_pred             eEEEEEEEcCCHHHHHHHHHHCCCEEecccCC-C-CCEEEEEeCCCeEEEEEEC
Confidence            56899999999999999998899887665211 1 1124444246777887554

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1

Probab=88.24  E-value=1.7  Score=29.24  Aligned_cols=55  Identities=18%  Similarity=0.152  Sum_probs=38.6

Q ss_pred             CceEEEEEeCCHHHHHHHHHh-cCCEEeecCCC-CccceEEEEECCC---CcEEEEeecC
Q 029933          122 GFGHIGITVDDVYKACERFER-LGVEFAKKPDG-GKLKGVAFIKDPD---DYWIEIFDLK  176 (185)
Q Consensus       122 g~~hi~~~v~dv~~~~~~l~~-~G~~~~~~~~~-~~~~~~~~~~DPd---G~~iEl~~~~  176 (185)
                      .+.|+.+.|.|+++..+.+.+ .|.++...... ......+++.-++   +..|+|++..
T Consensus         8 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~   67 (144)
T 2c21_A            8 RMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNY   67 (144)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTTTSCEEEEEEET
T ss_pred             eeEEEEEEeCCHHHHHHHHHhcCCCEEEEeeecCCCCeEEEEEEcCCCCCceEEEEEecC
Confidence            678999999999999999975 79988754311 1111235555554   5889998764

>3opy_A 6-phosphofructo-1-kinase alpha-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}

Probab=87.91  E-value=8  Score=35.34  Aligned_cols=51  Identities=16%  Similarity=0.128  Sum_probs=36.8

Q ss_pred             eEEEEEeCCHHHHHHHHHhcCCEEeecCCCCccceEEEEECCCCcEEEEeecCc
Q 029933          124 GHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKT  177 (185)
Q Consensus       124 ~hi~~~v~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~~  177 (185)
                      ..+.|.+.|+..+.+.|....++  ..|.... -..+|+.||=||.|.+-....
T Consensus       125 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~dp~~~~~~~~~~~~  175 (989)
T 3opy_A          125 GEVTFFTASIDKLKAKLIEIGAE--IIPSKID-LVEFSTRDPMGDVISFSSYPS  175 (989)
T ss_dssp             CEEEEECSCHHHHHHHHHHSSCC--BCCCC---CCCEEEESSSEEEEECCSSSC
T ss_pred             ceEEEEeCcHHHHHHHhhhcccc--cCCCCCC-ceeEEEecCCCCEEeeecCCC
Confidence            57899999999999999877332  2232211 125899999999999876554

>3p8a_A Uncharacterized protein; mainly antiparallel beta sheets, alpha and beta protein, UNK function; HET: MSE BTB PG4; 1.95A {Staphylococcus aureus}

Probab=87.87  E-value=3.2  Score=32.21  Aligned_cols=32  Identities=6%  Similarity=0.293  Sum_probs=29.3

Q ss_pred             ceeEEEEEEEeCChHHHHHHHHHhcCCEEeee
Q 029933           26 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKR   57 (185)
Q Consensus        26 ~~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~   57 (185)
                      ...|.++.|.+.|++++++.|+++||++....
T Consensus       188 a~gI~~vvi~~~dp~~~~~~~~~l~g~~~~~~  219 (274)
T 3p8a_A          188 QFSIETVIVKSKNRSQTVSNWLKWFDMDIVEE  219 (274)
T ss_dssp             TEEEEEEEEEETTHHHHHHHHHHHHCCEEEEE
T ss_pred             cceEEEEEEEeCCHHHHHHHHHHHhCCCcccc
Confidence            35899999999999999999999999998765

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A*

Probab=87.86  E-value=1.7  Score=28.83  Aligned_cols=50  Identities=10%  Similarity=-0.021  Sum_probs=37.1

Q ss_pred             CceEEEEEeCCHHHHHHHHHh-cCCEEeecCCCCccceEEEEECCCCcEEEEeecC
Q 029933          122 GFGHIGITVDDVYKACERFER-LGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLK  176 (185)
Q Consensus       122 g~~hi~~~v~dv~~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~  176 (185)
                      .+.|+.+.|.|+++..+.+.+ .|.++.....     ..+.+...+|..+.|++..
T Consensus        13 ~i~~v~l~v~D~~~s~~FY~~~lG~~~~~~~~-----~~~~~~~~~~~~l~l~~~~   63 (132)
T 3sk2_A           13 TPNLQLVYVSNVERSTDFYRFIFKKEPVFVTP-----RYVAFPSSGDALFAIWSGG   63 (132)
T ss_dssp             CCCEEEEECSCHHHHHHHHHHHHTCCCSEECS-----SEEEEECSTTCEEEEESSS
T ss_pred             eeeEEEEEECCHHHHHHHHHHHcCCeEEEcCC-----CEEEEEcCCCcEEEEEeCC
Confidence            678999999999999999876 7987654321     1244555677888888754

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi}

Probab=87.58  E-value=2.1  Score=29.15  Aligned_cols=49  Identities=8%  Similarity=0.190  Sum_probs=37.0

Q ss_pred             CceEEEEEeCCHHHHHHHHHh-cCCEEeecCCCCccceEEEEECCCCcEEEEeecC
Q 029933          122 GFGHIGITVDDVYKACERFER-LGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLK  176 (185)
Q Consensus       122 g~~hi~~~v~dv~~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~  176 (185)
                      .+.|+.|.|+|++++.+.+.+ .|.++....  .   ..+++.. +|..|+|++..
T Consensus         5 ~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~--~---~~~~~~~-~~~~l~l~~~~   54 (150)
T 3bqx_A            5 QVAVITLGIGDLEASARFYGEGFGWAPVFRN--P---EIIFYQM-NGFVLATWLVQ   54 (150)
T ss_dssp             CCCEEEEEESCHHHHHHHHHHTSCCCCSEEC--S---SEEEEEC-SSSEEEEEEHH
T ss_pred             ceEEEEEEcCCHHHHHHHHHHhcCCEeecCC--C---CEEEEEc-CCEEEEEEecc
Confidence            568999999999999999986 798876543  1   2345554 68889998753

>3vw9_A Lactoylglutathione lyase; glyoxalase, lyase-lyase inhibitor complex; HET: EPE HPJ; 1.47A {Homo sapiens} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* 2za0_A*

Probab=87.44  E-value=1.6  Score=30.82  Aligned_cols=54  Identities=19%  Similarity=0.122  Sum_probs=38.9

Q ss_pred             CceEEEEEeCCHHHHHHHHH-hcCCEEeecCCC-CccceEEEEECCCC------------------cEEEEeec
Q 029933          122 GFGHIGITVDDVYKACERFE-RLGVEFAKKPDG-GKLKGVAFIKDPDD------------------YWIEIFDL  175 (185)
Q Consensus       122 g~~hi~~~v~dv~~~~~~l~-~~G~~~~~~~~~-~~~~~~~~~~DPdG------------------~~iEl~~~  175 (185)
                      .++|+++.|.|+++..+.+. ..|.++...... ......+|+..+++                  ..|||+..
T Consensus        34 ~l~Hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~  107 (187)
T 3vw9_A           34 LLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHN  107 (187)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESCCGGGSCSSHHHHHHHHTTCSSEEEEEEE
T ss_pred             EEEEEEEEeCCHHHHHHHHHHhcCcEEeeccccCCCceeEEEecCCCcccccccccchhhhcccCCceEEEEEe
Confidence            67899999999999999995 679988764321 11223566666653                  78999754

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygen virulence, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A

Probab=87.30  E-value=1.9  Score=29.24  Aligned_cols=50  Identities=16%  Similarity=0.185  Sum_probs=37.2

Q ss_pred             CceEEEEEeCCHHHHHHHHHh-cCCEEeecCCCCccceEEEEECCCCcEEEEeecCc
Q 029933          122 GFGHIGITVDDVYKACERFER-LGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKT  177 (185)
Q Consensus       122 g~~hi~~~v~dv~~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~~  177 (185)
                      ++.||.+.|.|+++..+.+.+ .|.++.....  .   .+++. .+|..|+|++...
T Consensus        23 ~l~hv~l~v~D~~~a~~FY~~vLG~~~~~~~~--~---~~~l~-~~~~~l~l~~~~~   73 (152)
T 3huh_A           23 RIDHLVLTVSDISTTIRFYEEVLGFSAVTFKQ--N---RKALI-FGAQKINLHQQEM   73 (152)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCCEEEEETT--T---EEEEE-ETTEEEEEEETTB
T ss_pred             eeeEEEEEeCCHHHHHHHHHhcCCCEEEEccC--C---eEEEE-eCCeEEEEeccCC
Confidence            678999999999999999988 8999887632  1   13333 2567788877543

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A*

Probab=87.14  E-value=2.4  Score=27.68  Aligned_cols=49  Identities=18%  Similarity=0.243  Sum_probs=36.3

Q ss_pred             CceEEEEEeCCHHHHHHHHHh-cCCEEeecCCCCccceEEEEECCCCcEEEEeecC
Q 029933          122 GFGHIGITVDDVYKACERFER-LGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLK  176 (185)
Q Consensus       122 g~~hi~~~v~dv~~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~  176 (185)
                      ++.|+++.|+|++++.+.+.+ .|.++.....  .   .+++. .+|..+++++..
T Consensus        10 ~i~hi~l~v~D~~~a~~FY~~~lG~~~~~~~~--~---~~~~~-~~~~~~~l~~~~   59 (133)
T 3ey7_A           10 HLDHLVLTVADIPTTTNFYEKVLGMKAVSFGA--G---RIALE-FGHQKINLHQLG   59 (133)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHHHCCEEEEETT--T---EEEEE-ETTEEEEEEETT
T ss_pred             ccCEEEEEECCHHHHHHHHHHccCceEEEecC--C---eEEEE-cCCEEEEEEcCC
Confidence            778999999999999999987 7999887531  1   13333 246778887754

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A*

Probab=86.27  E-value=1.8  Score=30.57  Aligned_cols=55  Identities=16%  Similarity=0.141  Sum_probs=38.5

Q ss_pred             CceEEEEEeCCHHHHHHHHHh-cCCEEeecCCC-CccceEEEEECC------------------CCcEEEEeecC
Q 029933          122 GFGHIGITVDDVYKACERFER-LGVEFAKKPDG-GKLKGVAFIKDP------------------DDYWIEIFDLK  176 (185)
Q Consensus       122 g~~hi~~~v~dv~~~~~~l~~-~G~~~~~~~~~-~~~~~~~~~~DP------------------dG~~iEl~~~~  176 (185)
                      .+.|+++.|.|+++..+.+.+ .|+++...... +.....+++..+                  ++..|+|++..
T Consensus        31 ~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~L~~~~  105 (184)
T 2za0_A           31 LLQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAWTFSRKATLELTHNW  105 (184)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESCCGGGSCSSHHHHHHHHTTSSSEEEEEEET
T ss_pred             eEEEEEEEeCCHHHHHHHHHHhcCCEEEEeccCCCCCceeEEecccccccCCcccchheeeecCCCceEEEEecC
Confidence            778999999999999999986 79988754321 111123455544                  36799998753

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens}

Probab=86.07  E-value=2.1  Score=29.10  Aligned_cols=50  Identities=10%  Similarity=0.124  Sum_probs=36.6

Q ss_pred             CceEEEEEeCCHHHHHHHHHh-cCCEEeecCCCCccceEEEEECCCCcEEEEeecC
Q 029933          122 GFGHIGITVDDVYKACERFER-LGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLK  176 (185)
Q Consensus       122 g~~hi~~~v~dv~~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~  176 (185)
                      .+.|+.|.|+|++++.+.+.+ .|+++....  ..   ..++.-.+|..|+|++..
T Consensus        25 ~l~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~--~~---~~~~~~~~~~~l~l~~~~   75 (144)
T 2kjz_A           25 HPDFTILYVDNPPASTQFYKALLGVDPVESS--PT---FSLFVLANGMKLGLWSRH   75 (144)
T ss_dssp             CCCEEEEEESCHHHHHHHHHHHHTCCCSEEE--TT---EEEEECTTSCEEEEEETT
T ss_pred             ceeEEEEEeCCHHHHHHHHHHccCCEeccCC--CC---eEEEEcCCCcEEEEEeCC
Confidence            668999999999999999876 798776532  11   244454557889988754

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila}

Probab=85.99  E-value=2.7  Score=28.79  Aligned_cols=50  Identities=10%  Similarity=0.070  Sum_probs=37.3

Q ss_pred             CceEEEEEeCCHHHHHHHHHh-cCCEEeecCCCCccceEEEEECCCCcEEEEeecC
Q 029933          122 GFGHIGITVDDVYKACERFER-LGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLK  176 (185)
Q Consensus       122 g~~hi~~~v~dv~~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~  176 (185)
                      ++.|+.+.|.|++++.+.+.+ .|.++.....     ..+++.-.+|..+.|+...
T Consensus         6 ~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~-----~~~~~~~~~g~~l~l~~~~   56 (148)
T 3rhe_A            6 DPNLVLFYVKNPAKSEEFYKNLLDTQPIESSP-----TFAMFVMKTGLRLGLWAQE   56 (148)
T ss_dssp             -CEEEEEEESCHHHHHHHHHHHHTCCCSEECS-----SEEEEECTTSCEEEEEEGG
T ss_pred             cccEEEEEeCCHHHHHHHHHHHcCCEEeccCC-----CEEEEEcCCCcEEEEecCC
Confidence            568999999999999999877 7988765431     1245565688889887654

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125}

Probab=85.88  E-value=4.9  Score=27.20  Aligned_cols=49  Identities=16%  Similarity=0.249  Sum_probs=36.7

Q ss_pred             CceEEEEEeCCHHHHHHHH----HhcCCEEeecCCCCccceEEEEECCCCcEEEEeecC
Q 029933          122 GFGHIGITVDDVYKACERF----ERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLK  176 (185)
Q Consensus       122 g~~hi~~~v~dv~~~~~~l----~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~  176 (185)
                      .+.|+++.|.|++++.+.+    ...|+++......+    ..|+.  ++..|+|++..
T Consensus        20 ~i~hv~l~v~Dl~~a~~FY~~~~~~LG~~~~~~~~~~----~~~~~--g~~~l~l~~~~   72 (146)
T 3ct8_A           20 MLHHVEINVDHLEESIAFWDWLLGELGYEDYQSWSRG----KSYKH--GKTYLVFVQTE   72 (146)
T ss_dssp             SCCEEEEEESCHHHHHHHHHHHHHHTTCEEEEEETTE----EEEEE--TTEEEEEEECC
T ss_pred             ceeEEEEEeCCHHHHHHHHHhhhhhCCCEEEEecCCC----ceEec--CCeEEEEEEcC
Confidence            7789999999999999888    56899887643221    23555  67789998765

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str}

Probab=84.99  E-value=2.5  Score=28.18  Aligned_cols=45  Identities=11%  Similarity=0.048  Sum_probs=28.9

Q ss_pred             eEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCC
Q 029933           28 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYED   74 (185)
Q Consensus        28 ~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~   74 (185)
                      ...|+++.|.|++++.+-.++  |.++.........+....++..++
T Consensus        74 ~~~~~~~~v~dv~~~~~~l~~--G~~~~~~~~~~~~g~~~~~~~DPd  118 (141)
T 2qnt_A           74 RNMLLYFEHADVDAAFQDIAP--HVELIHPLERQAWGQRVFRFYDPD  118 (141)
T ss_dssp             SSCEEEEEESCHHHHHC-CGG--GSCEEEEEEECTTSCEEEEEECTT
T ss_pred             CceEEEEEeCcHHHHHHHHHc--CCccccCCccCCCCCEEEEEECCC
Confidence            567999999999999998877  887665432212222445555544

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str}

Probab=83.66  E-value=2.9  Score=27.21  Aligned_cols=54  Identities=22%  Similarity=0.248  Sum_probs=36.0

Q ss_pred             CceEEEEEe--CCHHHHHHHHHh-cCCEEeecCCCCccceEEEEECCCCcEEEEeecC
Q 029933          122 GFGHIGITV--DDVYKACERFER-LGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLK  176 (185)
Q Consensus       122 g~~hi~~~v--~dv~~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~  176 (185)
                      ++.|+++.|  .|+++..+.+.+ .|.++...+........+++.. ++..++|.+..
T Consensus        10 ~i~hv~l~v~~~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~-~~~~l~l~~~~   66 (126)
T 2qqz_A           10 GIDHVQVAAPVGCEEEARAFYGETIGMEEIPKPEELKKRGGCWFKC-GNQEIHIGVEQ   66 (126)
T ss_dssp             EEEEEEEEECTTTHHHHHHHHTTTTCCEEECCCGGGGGGCCEEEEE-TTEEEEEEECT
T ss_pred             eeeeEEEEcccccHHHHHHHHHhcCCCEEecCcccccCCCceEEEe-CCEEEEEEecC
Confidence            678999999  899999999975 7999876542110011234443 46778887643

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei}

Probab=83.39  E-value=4.8  Score=27.36  Aligned_cols=55  Identities=13%  Similarity=0.076  Sum_probs=37.4

Q ss_pred             EEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCC
Q 029933           29 MQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWG  103 (185)
Q Consensus        29 i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~  103 (185)
                      ..|++|.|.|++++.+-.++ .|.++.........+ ..+++..++                  +..++++....
T Consensus        66 ~~hl~f~V~d~d~~~~~l~~-~G~~v~~~p~~~~~G-~~~~~~DPd------------------G~~iel~~~~~  120 (144)
T 3r6a_A           66 NTQATFLVDSLDKFKTFLEE-NGAEIIRGPSKVPTG-RNMTVRHSD------------------GSVIEYVEHSK  120 (144)
T ss_dssp             GCCEEEEESCHHHHHHHHHH-TTCEEEEEEEEETTE-EEEEEECTT------------------SCEEEEEEECC
T ss_pred             ceEEEEEeCCHHHHHHHHHH-cCCEEecCCccCCCc-eEEEEECCC------------------CCEEEEEEcCC
Confidence            47999999999999888866 798876543211222 345566544                  56899887643

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens}

Probab=82.46  E-value=4.2  Score=28.01  Aligned_cols=51  Identities=22%  Similarity=0.319  Sum_probs=36.7

Q ss_pred             CCceEEEEEeCCHHHHHHHHHh-cCCEEeecCCCCccceEEEEECCCCcEEEEeecC
Q 029933          121 RGFGHIGITVDDVYKACERFER-LGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLK  176 (185)
Q Consensus       121 ~g~~hi~~~v~dv~~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~  176 (185)
                      .++.||++.|+|++++.+.+.+ .|.++......    ..+++.. ++..+++++..
T Consensus         7 ~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~----~~~~~~~-g~~~~~l~~~~   58 (160)
T 3r4q_A            7 SAIMETALYADDLDAAEAFYRDVFGLEMVLKLPG----QLVFFKC-GRQMLLLFDPQ   58 (160)
T ss_dssp             SCEEEEEEECSCHHHHHHHHHHHSCCEEEEEETT----TEEEEEE-TTEEEEEECHH
T ss_pred             ccccEEEEEeCCHHHHHHHHHHhcCCEEEEecCC----cEEEEeC-CCEEEEEEecC
Confidence            3789999999999999999987 89998765321    1244343 55677777643

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2

Probab=82.15  E-value=4.7  Score=25.77  Aligned_cols=45  Identities=7%  Similarity=-0.065  Sum_probs=28.8

Q ss_pred             EEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCC
Q 029933           29 MQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYED   74 (185)
Q Consensus        29 i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~   74 (185)
                      ..|+++.|.|++++.+..++ .|.++.........+....++..++
T Consensus        65 ~~~~~~~v~d~~~~~~~l~~-~G~~~~~~~~~~~~g~~~~~~~DPd  109 (119)
T 2pjs_A           65 VPDLSIEVDNFDEVHARILK-AGLPIEYGPVTEAWGVQRLFLRDPF  109 (119)
T ss_dssp             CCSEEEEESCHHHHHHHHHH-TTCCCSEEEEECTTSCEEEEEECTT
T ss_pred             eeEEEEEECCHHHHHHHHHH-CCCccccCCccCCCccEEEEEECCC
Confidence            46899999999999998876 6877655422111122345555443

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2

Probab=81.73  E-value=6.6  Score=25.06  Aligned_cols=26  Identities=15%  Similarity=0.282  Sum_probs=21.6

Q ss_pred             EEEEEeCChHHHHHHHHHhcCCEEeee
Q 029933           31 QTMFRIKDPKVSLDFYSRVLGMSLLKR   57 (185)
Q Consensus        31 h~~l~v~D~e~s~~FY~~~LG~~~~~~   57 (185)
                      |+++.|.|++++.+-.++ .|.++...
T Consensus        66 ~~~~~v~d~~~~~~~l~~-~G~~~~~~   91 (118)
T 2i7r_A           66 IIHIEVEDVDQNYKRLNE-LGIKVLHG   91 (118)
T ss_dssp             EEEEECSCHHHHHHHHHH-HTCCEEEE
T ss_pred             EEEEEECCHHHHHHHHHH-CCCceecC
Confidence            799999999999998876 68876544

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens}

Probab=81.42  E-value=4.8  Score=27.17  Aligned_cols=49  Identities=18%  Similarity=0.277  Sum_probs=34.8

Q ss_pred             CCceEEEEEeCCHHHHHHHHHh-cCCEEeecCCCCccceEEEEECCCCcEEEEeec
Q 029933          121 RGFGHIGITVDDVYKACERFER-LGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDL  175 (185)
Q Consensus       121 ~g~~hi~~~v~dv~~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~  175 (185)
                      .++.||.+.|.|+++..+.+.+ .|+++......  .   .++. -++..++|+..
T Consensus        26 ~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~--~---~~l~-~g~~~l~l~~~   75 (147)
T 3zw5_A           26 RRLDHIVMTVKSIKDTTMFYSKILGMEVMTFKED--R---KALC-FGDQKFNLHEV   75 (147)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHHHHCCEEEEETTT--E---EEEE-ETTEEEEEEET
T ss_pred             ccccEEEEEeCCHHHHHHHHHHhcCCEEEecCCC--c---eEEE-ECCcEEEEEEc
Confidence            3778999999999999999987 89998854321  1   2222 13457777664

>3iuz_A Putative glyoxalase superfamily protein; struct genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: MLY P6G PGE; 1.90A {Ralstonia eutropha}

Probab=81.31  E-value=3.5  Score=32.98  Aligned_cols=47  Identities=11%  Similarity=0.078  Sum_probs=34.9

Q ss_pred             eeEEEEEEEeCC----------hHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCC
Q 029933           27 YFMQQTMFRIKD----------PKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYED   74 (185)
Q Consensus        27 ~~i~h~~l~v~D----------~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~   74 (185)
                      +..+|++|++-+          ++...+++. .||++++....++..+....++...+
T Consensus        78 i~nDHiA~RT~~~~~~g~l~~gl~~lariF~-~lGy~p~G~Ydl~~k~l~a~afrp~d  134 (340)
T 3iuz_A           78 VVFDHGALRTVXWRDNGALPEGEAAFTRILR-PLGYRLNGNYPLDRISMTGRSYAHAD  134 (340)
T ss_dssp             BCEEEEEEEEECCSCCTTSCSTTHHHHHHHH-HHTEEEEEEEEEGGGTEEEEEEEETT
T ss_pred             eecceeEEEeeecCCcCcCchhHHHHHHHHH-HcCCeEcceeccCCCCCeEEEecCCC
Confidence            578999999843          455677774 59999998887777777666666654

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2

Probab=80.74  E-value=5.5  Score=26.41  Aligned_cols=54  Identities=19%  Similarity=0.345  Sum_probs=35.9

Q ss_pred             CceEEEEEeCCHHHHHHHHHh-cCCEEeecCCCCcc--ceEEEEECCCCcEEEEeecC
Q 029933          122 GFGHIGITVDDVYKACERFER-LGVEFAKKPDGGKL--KGVAFIKDPDDYWIEIFDLK  176 (185)
Q Consensus       122 g~~hi~~~v~dv~~~~~~l~~-~G~~~~~~~~~~~~--~~~~~~~DPdG~~iEl~~~~  176 (185)
                      ++.|+.+.|.|+++..+.+.+ .|.++.........  +...++. .+|..|++++..
T Consensus         4 ~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~-~g~~~l~l~~~~   60 (139)
T 1r9c_A            4 GLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFL-IGDIWVAIMQGE   60 (139)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHHHCCEEEEEGGGSTTCCSCEEEEE-ETTEEEEEEECC
T ss_pred             eEEEEEEEeCCHHHHHHHHHHhhCCEEeecCCCccccccceEEEE-ECCEEEEEEeCC
Confidence            568999999999999999976 89988754321110  1111333 257788888753

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila}

Probab=80.33  E-value=3.2  Score=28.43  Aligned_cols=29  Identities=24%  Similarity=0.206  Sum_probs=24.8

Q ss_pred             CceEEEEEeCCHHHHHHHHHh-cCCEEeec
Q 029933          122 GFGHIGITVDDVYKACERFER-LGVEFAKK  150 (185)
Q Consensus       122 g~~hi~~~v~dv~~~~~~l~~-~G~~~~~~  150 (185)
                      .+.|+++.|+|++++.+...+ .|.++..+
T Consensus        26 ri~~v~I~V~Dle~A~~FY~dvLGf~v~~d   55 (155)
T 4g6x_A           26 RIHLTNVFVDDQAKAESFYTGKLGFLVKAD   55 (155)
T ss_dssp             CCCEEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred             EEEEEEEEeCCHHHHHHHHHHHhCCEEEEe
Confidence            468999999999999999975 79988654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	185
d1qipa_	176	d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lya	6e-38
d1f9za_	135	d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lya	2e-14
d1sqda1	167	d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxyg	1e-13
d1twua_	137	d.32.1.8 (A:) Hypothetical protein YycE {Bacillus	4e-13
d2c21a1	139	d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathion	5e-12
d1ss4a_	149	d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillu	9e-11
d1jc4a_	145	d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propion	5e-10
d1sp8a1	172	d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxyg	5e-09
d1t47a1	163	d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxyg	1e-07
d1zswa1	144	d.32.1.10 (A:1-144) Hypothetical protein BC1024 {B	1e-06
d1r9ca_	130	d.32.1.2 (A:) Fosfomycin resistance protein FosX {	3e-06
d2i7ra1	115	d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Str	1e-05
d1cjxa1	150	d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxyge	3e-05
d1nkia_	134	d.32.1.2 (A:) Fosfomycin resistance protein A (Fos	5e-05
d1cjxa2	203	d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxy	2e-04
d1npba_	140	d.32.1.2 (A:) Fosfomycin resistance protein A (Fos	2e-04
d1mpya2	162	d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (met	3e-04
d2pjsa1	111	d.32.1.2 (A:3-113) Uncharacterized protein Atu1953	0.001
d1mpya1	145	d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metap	0.002

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  126 bits (317), Expect = 6e-38
 Identities = 97/168 (57%), Positives = 121/168 (72%), Gaps = 1/168 (0%)

Query: 14  PGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYE 73
               +  D +T  + +QQTM R+KDPK SLDFY+RVLGM+L+++ DFP MKFSLYFL YE
Sbjct: 9   LSCCSDADPSTKDFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYE 68

Query: 74  DTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDV 133
           D    P +  ++  W   + AT+ELTHNWGTE D     YHNGNS+PRGFGHIGI V DV
Sbjct: 69  DKNDIPKEKDEKIAWALSRKATLELTHNWGTEDDETQS-YHNGNSDPRGFGHIGIAVPDV 127

Query: 134 YKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTIGKI 181
           Y AC+RFE LGV+F KKPD GK+KG+AFI+DPD YWIEI +   +  +
Sbjct: 128 YSACKRFEELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILNPNKMATL 175

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]} Length = 135

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

 Score = 64.7 bits (156), Expect = 2e-14
 Identities = 51/155 (32%), Positives = 78/155 (50%), Gaps = 27/155 (17%)

Query: 32  TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 91
           TM R+ D + S+DFY++VLGM LL+  + PE K+SL F+GY                   
Sbjct: 6   TMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGY---------------GPET 50

Query: 92  KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP 151
           + A IELT+NWG +       Y           HI ++VD+  +ACE+  + G    ++ 
Sbjct: 51  EEAVIELTYNWGVDKYELGTAYG----------HIALSVDNAAEACEKIRQNGGNVTREA 100

Query: 152 --DGGKLKGVAFIKDPDDYWIEIFDLKTIGKIGGS 184
               G    +AF++DPD Y IE+ + K  G+  G+
Sbjct: 101 GPVKGGTTVIAFVEDPDGYKIELIEEKDAGRGLGN 135

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 167

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 63.7 bits (154), Expect = 1e-13
 Identities = 21/137 (15%), Positives = 31/137 (22%), Gaps = 3/137 (2%)

Query: 32  TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 91
             F   D       +S  LGM    + D                                
Sbjct: 16  IEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTS--GDLRFLFTAPYSPSL 73

Query: 92  KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP 151
               I+ T      S          +S   G   + I V+D   A       G   +  P
Sbjct: 74  SAGEIKPTTTASIPSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGAIPSSPP 133

Query: 152 -DGGKLKGVAFIKDPDD 167
               +   +A +K   D
Sbjct: 134 IVLNEAVTIAEVKLYGD 150

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]} Length = 137

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

 Score = 61.1 bits (147), Expect = 4e-13
 Identities = 18/154 (11%), Positives = 35/154 (22%), Gaps = 29/154 (18%)

Query: 29  MQQTMFRIKDP----KVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVD 84
            Q    RI  P       + FY   L +  +         +     G             
Sbjct: 6   FQAAQIRIARPTGQLDEIIRFYEEGLCLKRIGEFSQHNG-YDGVMFGLPHAD-------- 56

Query: 85  RTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLG 144
                        L              + +                ++     + + +G
Sbjct: 57  -----------YHLEFTQYEGGSTAPVPHPDS-----LLVFYVPNAVELAAITSKLKHMG 100

Query: 145 VEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTI 178
            +  +  +     G   I+DPD + I   + K I
Sbjct: 101 YQEVESENPYWSNGGVTIEDPDGWRIVFMNSKGI 134

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]} Length = 139

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

 Score = 58.5 bits (140), Expect = 5e-12
 Identities = 40/146 (27%), Positives = 61/146 (41%), Gaps = 28/146 (19%)

Query: 32  TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 91
           TM R+ D   S+ FY+  LGM +L++ D PE K++L FLGY                   
Sbjct: 7   TMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGP----------------- 49

Query: 92  KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP 151
                       T  +  +            +GHI I V+DV +      +  V    + 
Sbjct: 50  --------EMSSTVLELTYNYGVTSYKHDEAYGHIAIGVEDVKELVADMRKHDVPIDYED 101

Query: 152 DGGKLKGVAFIKDPDDYWIEIFDLKT 177
           + G +   AF+ DPD Y+IE+ + KT
Sbjct: 102 ESGFM---AFVVDPDGYYIELLNEKT 124

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]} Length = 149

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

 Score = 55.5 bits (132), Expect = 9e-11
 Identities = 21/146 (14%), Positives = 50/146 (34%), Gaps = 11/146 (7%)

Query: 29  MQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVW 88
           M      ++    ++ F+   +G++L  R +    +++    G        A      + 
Sbjct: 10  MDNVSIVVESLDNAISFFEE-IGLNLEGRANVE-GEWAGRVTGLGSQCVEIAM-----MV 62

Query: 89  TFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFA 148
           T    + IEL+      +  D   +        G+  +  TV+D+ +   R  + G E  
Sbjct: 63  TPDGHSRIELSRFLTPPTIAD---HRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELV 119

Query: 149 KKP-DGGKLKGVAFIKDPDDYWIEIF 173
            +         + +I+  +   I + 
Sbjct: 120 GEVVQYENSYRLCYIRGVEGILIGLA 145

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]} Length = 145

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

 Score = 53.1 bits (126), Expect = 5e-10
 Identities = 19/145 (13%), Positives = 36/145 (24%), Gaps = 19/145 (13%)

Query: 32  TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 91
             +   D   +  +Y    G   L R + PE       +                     
Sbjct: 11  VAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMM---------------APAAKL 55

Query: 92  KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP 151
                ++        +     +   ++   G  H+   VDD+          GV+     
Sbjct: 56  TEHMTQVQVMAPLNDESTVAKWLAKHNGRAGLHHMAWRVDDIDAVSATLRERGVQLLYDE 115

Query: 152 --DGGKLKGVAFI--KDPDDYWIEI 172
              G     + F+  K      IE+
Sbjct: 116 PKLGTGGNRINFMHPKSGKGVLIEL 140

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]} Length = 172

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

 Score = 51.0 bits (121), Expect = 5e-09
 Identities = 20/144 (13%), Positives = 35/144 (24%), Gaps = 9/144 (6%)

Query: 32  TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 91
                 D   +   +S  LG  L  R D      +   L            +        
Sbjct: 17  VELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRS------GSLSFLFTAPY 70

Query: 92  KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP 151
                  T    + S    + +   +        + + V D   A       G   A  P
Sbjct: 71  AHGADAATAALPSFSAAAARRFAADH--GLAVRAVALRVADAEDAFRASVAAGARPAFGP 128

Query: 152 -DGGKLKGVAFIKDPDDYWIEIFD 174
            D G+   +A ++   D  +    
Sbjct: 129 VDLGRGFRLAEVELYGDVVLRYVS 152

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]} Length = 163

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

 Score = 47.1 bits (111), Expect = 1e-07
 Identities = 21/146 (14%), Positives = 35/146 (23%), Gaps = 23/146 (15%)

Query: 34  FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKP 93
           F + + K +  +YS   GM L+                  +                   
Sbjct: 13  FAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTN-----------------GS 55

Query: 94  ATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP-- 151
           A   LT      +        +      G   + I V D   A       G     +P  
Sbjct: 56  ARFVLTSVIKPATPWGHFLADHVAEHGDGVVDLAIEVPDARAAHAYAIEHGARSVAEPYE 115

Query: 152 ---DGGKLKGVAFIKDPDDYWIEIFD 174
              + G +  +A I         + D
Sbjct: 116 LKDEHGTVV-LAAIATYGKTRHTLVD 140

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]} Length = 144

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

 Score = 43.9 bits (102), Expect = 1e-06
 Identities = 19/144 (13%), Positives = 37/144 (25%), Gaps = 27/144 (18%)

Query: 32  TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 91
                K+   +  FY  VLG+  +K     +     +    + T                
Sbjct: 10  ISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTG--------------- 54

Query: 92  KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVY---KACERFERLGVEFA 148
                         S  +                IG+ V          ERFE+  V+ +
Sbjct: 55  --------SPGTELSFFEIPLVGRTYRGTNAITRIGLLVPSEDSLHYWKERFEKFDVKHS 106

Query: 149 KKPDGGKLKGVAFIKDPDDYWIEI 172
           +         + F +D +   + +
Sbjct: 107 EMTTYANRPALQF-EDAEGLRLVL 129

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]} Length = 130

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

 Score = 42.6 bits (99), Expect = 3e-06
 Identities = 17/143 (11%), Positives = 36/143 (25%), Gaps = 31/143 (21%)

Query: 32  TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 91
             F ++D +        V     +   D  +                       +   F 
Sbjct: 8   MTFIVRDLERMTRILEGVFDAREVYASDTEQFSL--------------------SREKFF 47

Query: 92  KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP 151
               I +    G +       +              I   D  +  ER  +LG++     
Sbjct: 48  LIGDIWVAIMQGEKLAERSYNHI----------AFKIDDADFDRYAERVGKLGLDMRPPR 97

Query: 152 DGGKLKG-VAFIKDPDDYWIEIF 173
              + +G   +  D D++  E+ 
Sbjct: 98  PRVEGEGRSIYFYDDDNHMFELH 120

>d2i7ra1 d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Streptococcus pneumoniae [TaxId: 1313]} Length = 115

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypotheical protein SP0731
species: Streptococcus pneumoniae [TaxId: 1313]

 Score = 40.6 bits (94), Expect = 1e-05
 Identities = 16/106 (15%), Positives = 32/106 (30%), Gaps = 11/106 (10%)

Query: 72  YEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVD 131
            E      AD  +     F   +   +          +F+              I I V+
Sbjct: 20  LEHILDKKADYANDGFAQFTIGSHCLMLSQNHLVPLENFQSGI----------IIHIEVE 69

Query: 132 DVYKACERFERLGVEFAKKPDGGKLKG-VAFIKDPDDYWIEIFDLK 176
           DV +  +R   LG++    P           ++ P    ++ + +K
Sbjct: 70  DVDQNYKRLNELGIKVLHGPTVTDWGTESLLVQGPAGLVLDFYRMK 115

>d1cjxa1 d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]} Length = 150

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

 Score = 40.0 bits (93), Expect = 3e-05
 Identities = 17/103 (16%), Positives = 26/103 (25%), Gaps = 4/103 (3%)

Query: 72  YEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVD 131
           +E                  +   I L  N    S   +    +G         +   V 
Sbjct: 27  FEIMGFTKVATHRSKNVHLYRQGEINLILNNEPNSIASYFAAEHGP----SVCGMAFRVK 82

Query: 132 DVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFD 174
           D  KA  R   LG +      G     +  IK      + + D
Sbjct: 83  DSQKAYNRALELGAQPIHIDTGPMELNLPAIKGIGGAPLYLID 125

>d1nkia_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Pseudomonas aeruginosa [TaxId: 287]} Length = 134

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 39.1 bits (90), Expect = 5e-05
 Identities = 19/142 (13%), Positives = 31/142 (21%), Gaps = 37/142 (26%)

Query: 32  TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 91
               + D   S+ FY  +LG  L  R                                  
Sbjct: 8   LTLAVADLPASIAFYRDLLGFRLEAR---------------------------------- 33

Query: 92  KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP 151
                              +  + G +        GI   D  +   +    GV   K+ 
Sbjct: 34  -WDQGAYLELGSLWLCLSREPQYGGPAADYTHYAFGIAAADFARFAAQLRAHGVREWKQN 92

Query: 152 DGGKLKGVAFIKDPDDYWIEIF 173
                    +  DPD + +E  
Sbjct: 93  RSEG--DSFYFLDPDGHRLEAH 112

>d1cjxa2 d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]} Length = 203

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

 Score = 38.4 bits (89), Expect = 2e-04
 Identities = 16/130 (12%), Positives = 35/130 (26%), Gaps = 17/130 (13%)

Query: 42  SLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHN 101
             +FY ++      +  D       L                 + +        I L   
Sbjct: 21  WANFYEKLFNFREARYFDIKGEYTGLTS---------------KAMSAPDGMIRIPLNEE 65

Query: 102 WGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAF 161
               +    +     N E  G  H+    DD+ K  +  +++G+ F   P     + +  
Sbjct: 66  SSKGAGQIEEFLMQFNGE--GIQHVAFLTDDLVKTWDALKKIGMRFMTAPPDTYYEMLEG 123

Query: 162 IKDPDDYWIE 171
                   ++
Sbjct: 124 RLPDHGEPVD 133

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]} Length = 140

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

 Score = 37.7 bits (86), Expect = 2e-04
 Identities = 20/144 (13%), Positives = 39/144 (27%), Gaps = 38/144 (26%)

Query: 32  TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 91
               + D + S+ F+  +LG++L  R +                                
Sbjct: 8   LTLAVSDLQKSVTFWHELLGLTLHARWNTGAYLT-------------------------- 41

Query: 92  KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITV--DDVYKACERFERLGVEFAK 149
                              +       +   + H   TV  +D     +R E+ GV   K
Sbjct: 42  --------CGDLWVCLSYDEARQYVPPQESDYTHYAFTVAEEDFEPLSQRLEQAGVTIWK 93

Query: 150 KPDGGKLKGVAFIKDPDDYWIEIF 173
           +          +  DPD + +E+ 
Sbjct: 94  QNKSEG--ASFYFLDPDGHKLELH 115

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]} Length = 162

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

 Score = 37.6 bits (86), Expect = 3e-04
 Identities = 19/144 (13%), Positives = 37/144 (25%), Gaps = 32/144 (22%)

Query: 32  TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 91
            +    +   + D +++VLG  L +++          FL                     
Sbjct: 9   ALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTK---------------- 52

Query: 92  KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP 151
                   H+      P+    H+             T +D+ +A +            P
Sbjct: 53  -------AHDVAFIHHPEKGRLHH-------VSFHLETWEDLLRAADLISMTDTSIDIGP 98

Query: 152 DGGKLKGV--AFIKDPDDYWIEIF 173
               L      +  DP     E+F
Sbjct: 99  TRHGLTHGKTIYFFDPSGNRNEVF 122

>d2pjsa1 d.32.1.2 (A:3-113) Uncharacterized protein Atu1953 {Agrobacterium tumefaciens [TaxId: 358]} Length = 111

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Uncharacterized protein Atu1953
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 35.4 bits (80), Expect = 0.001
 Identities = 20/142 (14%), Positives = 35/142 (24%), Gaps = 38/142 (26%)

Query: 32  TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 91
                 +P  +  FY  +LGM +     +                               
Sbjct: 6   ANIATPEPARAQAFYGDILGMPVAMDHGWIVT------------------------HASP 41

Query: 92  KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP 151
             A  +++      S  D                + I VD+  +   R  + G+     P
Sbjct: 42  LEAHAQVSFAREGGSGTDVP-------------DLSIEVDNFDEVHARILKAGLPIEYGP 88

Query: 152 -DGGKLKGVAFIKDPDDYWIEI 172
                     F++DP    I I
Sbjct: 89  VTEAWGVQRLFLRDPFGKLINI 110

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]} Length = 145

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

 Score = 34.6 bits (78), Expect = 0.002
 Identities = 16/144 (11%), Positives = 31/144 (21%), Gaps = 36/144 (25%)

Query: 32  TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG 91
              R+ D   +L+ Y  +LG+  + R D   +                            
Sbjct: 11  VQLRVLDMSKALEHYVELLGLIEMDRDDQGRVYL-------------------------- 44

Query: 92  KPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP 151
                     W                     G   +  D + +        G    + P
Sbjct: 45  --------KAWTEVDKFSLVLREADEPGMDFMGFKVVDEDALRQLERDLMAYGCAVEQLP 96

Query: 152 DGGKLKG--VAFIKDPDDYWIEIF 173
            G           + P  +  E++
Sbjct: 97  AGELNSCGRRVRFQAPSGHHFELY 120

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	185
d1qipa_	176	Glyoxalase I (lactoylglutathione lyase) {Human (Ho	99.94
d1ss4a_	149	Hypothetical protein BC1747 {Bacillus cereus (stra	99.87
d1f9za_	135	Glyoxalase I (lactoylglutathione lyase) {Escherich	99.87
d2i7ra1	115	Hypotheical protein SP0731 {Streptococcus pneumoni	99.86
d1jc4a_	145	Methylmalonyl-CoA epimerase {Propionibacterium she	99.85
d1zswa1	144	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.84
d1mpya2	162	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	99.84
d1twua_	137	Hypothetical protein YycE {Bacillus subtilis [TaxI	99.83
d1zswa2	170	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.82
d1xqaa_	113	Hypothetical protein BC3580 {Bacillus cereus [TaxI	99.82
d2c21a1	139	Glyoxalase I (lactoylglutathione lyase) {Leishmani	99.81
d1f1ua1	146	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	99.8
d1r9ca_	130	Fosfomycin resistance protein FosX {Mesorhizobium	99.8
d1lgta1	131	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.78
d1npba_	140	Fosfomycin resistance protein A (FosA) {Serratia m	99.78
d2pjsa1	111	Uncharacterized protein Atu1953 {Agrobacterium tum	99.78
d1klla_	128	Mitomycin resistance protein D, MRD {Streptomyces	99.77
d1nkia_	134	Fosfomycin resistance protein A (FosA) {Pseudomona	99.77
d1kw3b1	132	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.76
d1mpya1	145	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	99.76
d1sqia1	149	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	99.75
d1f1ua2	176	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	99.75
d1t47a1	163	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	99.74
d1sqda1	167	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	99.72
d1kw3b2	156	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.71
d1ecsa_	120	Bleomycin resistance protein, BRP {Klebsiella pneu	99.71
d1sp8a1	172	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	99.69
d1jifa_	122	Bleomycin resistance protein, BRP {Streptomyces ve	99.67
d1xrka_	120	Bleomycin resistance protein, BRP {Streptoalloteic	99.64
d1xy7a_	135	Hypothetical protein At5g48480 {Thale cress (Arabi	99.55
d1cjxa1	150	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	99.43
d1sp8a2	224	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	99.27
d1cjxa2	203	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	99.27
d1t47a2	199	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	99.25
d1sqia2	210	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	99.19
d1u6la_	137	Hypothetical protein PA1353 {Pseudomonas aeruginos	99.15
d1sqda2	230	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	98.92
d1u7ia_	134	Hypothetical protein PA1358 {Pseudomonas aeruginos	98.75
d1tsja_	129	Hypothetical protein MW1090 {Staphylococcus aureus	98.17
d1ss4a_	149	Hypothetical protein BC1747 {Bacillus cereus (stra	96.33
d1u69a_	156	Hypothetical protein PA2721 {Pseudomonas aeruginos	95.33
d1xqaa_	113	Hypothetical protein BC3580 {Bacillus cereus [TaxI	95.27
d1sqda1	167	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	92.91
d1t47a1	163	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	92.67
d1sqia1	149	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	92.36
d1sp8a1	172	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	92.01
d1k4na_	190	Hypothetical protein YecM (EC4020) {Escherichia co	90.47
d1zswa1	144	Hypothetical protein BC1024 {Bacillus cereus [TaxI	90.28
d1jc4a_	145	Methylmalonyl-CoA epimerase {Propionibacterium she	89.03
d1lgta1	131	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	88.15
d1qipa_	176	Glyoxalase I (lactoylglutathione lyase) {Human (Ho	87.56
d1zswa2	170	Hypothetical protein BC1024 {Bacillus cereus [TaxI	87.48
d1f1ua2	176	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	87.1
d1klla_	128	Mitomycin resistance protein D, MRD {Streptomyces	85.97
d1kw3b2	156	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	85.12
d2f06a1	71	Hypothetical protein BT0572 {Bacteroides thetaiota	83.02
d1r9ca_	130	Fosfomycin resistance protein FosX {Mesorhizobium	82.02
d1npba_	140	Fosfomycin resistance protein A (FosA) {Serratia m	80.45
d1cjxa1	150	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	80.3
d1mpya1	145	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	80.17

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1.9e-26  Score=169.44  Aligned_cols=167  Identities=58%  Similarity=1.105  Sum_probs=116.7

Q ss_pred             CCCCCCCCCCCCceeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCC
Q 029933           14 PGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKP   93 (185)
Q Consensus        14 ~~~~~~~~~~~~~~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (185)
                      +..++-|.+.+..++++|++|.|+|+++|++||+++|||++......+..++...+...+...........+..+.....
T Consensus         9 ~~~~~~~~~~~~~~~l~Hi~l~V~Dl~~si~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (176)
T d1qipa_           9 LSCCSDADPSTKDFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRK   88 (176)
T ss_dssp             HHTCCCCCGGGTTCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESCCGGGSCSSHHHHHHHHTTSS
T ss_pred             hhhhcCCCCCccceEEeEEEEEeCCHHHHHHHHHHhhCCeEeeeecccCCceEEEEeecCCccccccccccccccccccc
Confidence            34445566778889999999999999999999999999999887766666666776665433211111122222222223


Q ss_pred             cEEEEeecCCCCCCCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCEEeecCCCCccceEEEEECCCCcEEEEe
Q 029933           94 ATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIF  173 (185)
Q Consensus        94 ~~l~l~~~~~~~~~~~~~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~  173 (185)
                      ....+........... ...........++.|+||.++|+++++++|+++|+++..+|..+.....+||+|||||+|||+
T Consensus        89 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~h~~~~~~d~~~~~~~l~~~Gv~~~~~p~~g~~~~~~f~~DPdG~~IElv  167 (176)
T d1qipa_          89 ATLELTHNWGTEDDET-QSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKGLAFIQDPDGYWIEIL  167 (176)
T ss_dssp             SEEEEEEETTGGGCTT-CCCBCSSSSSCBEEEEEEECSCHHHHHHHHHHTTCEEEECTTSSSSTTCEEEECTTCCEEEEE
T ss_pred             cceeEEEeeccccccC-cCccCCCCCccceeEEEeeHHHHHHHHHHHHHCCCEEeeCCccCCceEEEEEECCCCCEEEEE
Confidence            3333333222211111 112233334568899999999999999999999999999998776666789999999999999


Q ss_pred             ecCccccc
Q 029933          174 DLKTIGKI  181 (185)
Q Consensus       174 ~~~~~~~~  181 (185)
                      |+.+...|
T Consensus       168 q~~~~~~~  175 (176)
T d1qipa_         168 NPNKMATL  175 (176)
T ss_dssp             CTTTGGGC
T ss_pred             eCCCCCcc
Confidence            99987654

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

Probab=99.87  E-value=1.2e-21  Score=139.11  Aligned_cols=129  Identities=15%  Similarity=0.222  Sum_probs=90.2

Q ss_pred             ceeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecC-----------CCceEEEeeccCCCCCCCCCCccceeeecCCCc
Q 029933           26 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFP-----------EMKFSLYFLGYEDTASAPADPVDRTVWTFGKPA   94 (185)
Q Consensus        26 ~~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (185)
                      -++|+|++|.|+|++++++||++ |||++..+....           .......++....                 +..
T Consensus         7 ~~ri~Hv~i~v~Dle~s~~FY~~-LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----------------~~~   68 (149)
T d1ss4a_           7 LLRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPD-----------------GHS   68 (149)
T ss_dssp             EEEEEEEEEECSCHHHHHHHHHH-HTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTT-----------------SSC
T ss_pred             CCEEeEEEEEeCCHHHHHHHHHH-cCCcEeeeeccceeeeeeeeccCCCceeEEEEeecc-----------------cce
Confidence            35899999999999999999998 999988764321           2233344444322                 145


Q ss_pred             EEEEeecCCCCCCCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCEEeecCCCC-ccceEEEEECCCCcEEEEe
Q 029933           95 TIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGG-KLKGVAFIKDPDDYWIEIF  173 (185)
Q Consensus        95 ~l~l~~~~~~~~~~~~~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~~~~-~~~~~~~~~DPdG~~iEl~  173 (185)
                      .++++..........   .........|+.|++|.|+|+++++++|+++|+++..+|... ...+.+|++|||||+|||+
T Consensus        69 ~~~l~~~~~~~~~~~---~~~~~~~~~g~~hi~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~  145 (149)
T d1ss4a_          69 RIELSRFLTPPTIAD---HRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYENSYRLCYIRGVEGILIGLA  145 (149)
T ss_dssp             EEEEEEEEESCCCCB---CTTCCSSSBEEEEEEEEESCHHHHHHHHHHTTCEESSCCEEETTTEEEEEEECGGGCEEEEE
T ss_pred             EEEEEeeccccCccc---ccccCCCCcceeEEEEeechhHHHHHHHHHCCCeEccCCeECCCCeEEEEEECCCCCEEEEE
Confidence            666654322211111   111112234789999999999999999999999998877542 2335789999999999999


Q ss_pred             ec
Q 029933          174 DL  175 (185)
Q Consensus       174 ~~  175 (185)
                      |+
T Consensus       146 e~  147 (149)
T d1ss4a_         146 EE  147 (149)
T ss_dssp             EE
T ss_pred             Ec
Confidence            86

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

Probab=99.87  E-value=7.1e-21  Score=132.09  Aligned_cols=129  Identities=40%  Similarity=0.747  Sum_probs=88.6

Q ss_pred             eeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCC
Q 029933           27 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  106 (185)
Q Consensus        27 ~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~  106 (185)
                      |+++|++|+|+|+++|++||+++|||++..........+....+......               .....+.........
T Consensus         1 Mkl~Hv~i~V~Dl~~s~~FY~~iLG~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~   65 (135)
T d1f9za_           1 MRLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPET---------------EEAVIELTYNWGVDK   65 (135)
T ss_dssp             CCEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESSCTT---------------TSCEEEEEEETTCCC
T ss_pred             CcceEEEEEcCCHHHHHHHHHHHhCCEEEeeccccccceeeeeeccceee---------------ecccccccccccccc
Confidence            58999999999999999999999999998876655555544444332211               012222222211111


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCEEeecCCC--CccceEEEEECCCCcEEEEeecCcccc
Q 029933          107 DPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDG--GKLKGVAFIKDPDDYWIEIFDLKTIGK  180 (185)
Q Consensus       107 ~~~~~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~~~--~~~~~~~~~~DPdG~~iEl~~~~~~~~  180 (185)
                            .    ....+..|+++.+++++.+.++++++|..+..+|..  ......+||+|||||+|||+|+++.++
T Consensus        66 ------~----~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~q~~~~~~  131 (135)
T d1f9za_          66 ------Y----ELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKDAGR  131 (135)
T ss_dssp             ------C----CCCSSEEEEEEECSCHHHHHHHHHHTTCEEEEEEEECTTSCCEEEEEECTTSCEEEEEEC-----
T ss_pred             ------c----cccccceeeccchHHHHHHHHHHHHcCCCeecCCccccCCCeEEEEEECCCCCEEEEEECCCccc
Confidence                  1    122367899999999999999999999998877642  333457899999999999999887543

>d2i7ra1 d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypotheical protein SP0731
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.86  E-value=3.7e-21  Score=131.75  Aligned_cols=114  Identities=15%  Similarity=0.149  Sum_probs=84.5

Q ss_pred             eeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCC
Q 029933           27 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  106 (185)
Q Consensus        27 ~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~  106 (185)
                      |+++|+.|.|+|+++|++||+++||+++.....    .+  ..+..+                   ...+.+........
T Consensus         1 m~l~~i~i~V~di~~a~~FYe~~lg~~~~~~~~----~~--~~~~~g-------------------~~~l~l~~~~~~~~   55 (115)
T d2i7ra1           1 MNLNQLDIIVSNVPQVCADLEHILDKKADYAND----GF--AQFTIG-------------------SHCLMLSQNHLVPL   55 (115)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHHHTSCCSEEET----TE--EEEEET-------------------TEEEEEESSCSSSC
T ss_pred             CcceEEEEEECCHHHHHHHHHHhhCCceeeecC----Ce--EEEEEc-------------------CceeeeeecccCCC
Confidence            579999999999999999999999999876522    23  233322                   34566653322110


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCEEeecCCCCcc-ceEEEEECCCCcEEEEeecC
Q 029933          107 DPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKL-KGVAFIKDPDDYWIEIFDLK  176 (185)
Q Consensus       107 ~~~~~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~~~~~~-~~~~~~~DPdG~~iEl~~~~  176 (185)
                            ...     ....+++|.|+|+++++++++++|+++..+|...++ .+.+||+|||||+||+++.+
T Consensus        56 ------~~~-----~~~~~~~f~v~D~d~~~~~l~~~G~~i~~~~~~~~~g~~~~~~~DPdGn~ie~~~~k  115 (115)
T d2i7ra1          56 ------ENF-----QSGIIIHIEVEDVDQNYKRLNELGIKVLHGPTVTDWGTESLLVQGPAGLVLDFYRMK  115 (115)
T ss_dssp             ------CCC-----CSCEEEEEECSCHHHHHHHHHHHTCCEEEEEEECTTSCEEEEEECGGGCEEEEEECC
T ss_pred             ------CCC-----CcceEEEEEECCHHHHHHHHHhhccccccceEEeeCCeEEEEEECCCCCEEEEEEeC
Confidence                  111     123589999999999999999999999988765443 45899999999999999864

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

Probab=99.85  E-value=2e-21  Score=137.09  Aligned_cols=136  Identities=15%  Similarity=0.216  Sum_probs=93.2

Q ss_pred             ceeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCC
Q 029933           26 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE  105 (185)
Q Consensus        26 ~~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~  105 (185)
                      -.+|+|++|.|+|+++|++||+++||+++.........+....+....             .+...+...+++.......
T Consensus         5 ~~~i~Hi~i~v~Dl~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~el~~~~~~~   71 (145)
T d1jc4a_           5 FICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPA-------------AKLTEHMTQVQVMAPLNDE   71 (145)
T ss_dssp             CSEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESS-------------SSCCTTCCEEEEEEESSTT
T ss_pred             ceEEeEEEEEeCCHHHHHHHHHhhccCceeeeeeecccceEEEeeece-------------eccccccchhhhhhhhccc
Confidence            358999999999999999999999999988776544444333333211             1112235688887664433


Q ss_pred             CCCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCEEeecC-CCCccce-EEEE--ECCCCcEEEEeecC
Q 029933          106 SDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP-DGGKLKG-VAFI--KDPDDYWIEIFDLK  176 (185)
Q Consensus       106 ~~~~~~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~-~~~~~~~-~~~~--~DPdG~~iEl~~~~  176 (185)
                      .....  ......+..|++||||.|+|+++++++|+++|+++..++ ..+..++ .+|+  +||+|++|||+|+.
T Consensus        72 ~~~~~--~~~~~~~~~g~~Hia~~v~di~~~~~~l~~~Gv~~~~~~~~~~~~g~~~~f~~p~dp~G~~iEl~e~p  144 (145)
T d1jc4a_          72 STVAK--WLAKHNGRAGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGGNRINFMHPKSGKGVLIELTQYP  144 (145)
T ss_dssp             SHHHH--HHHHTTTCCEEEEEEEECSCHHHHHHHHHHHTCCBSCSSCEECSSSCEEEEBCGGGGTTSCEEEEECC
T ss_pred             Ccccc--cccccCCCCcceEEEEecchHHHHHHHHHHCCCEEeCCCceECCCCCEEEEEeccCCCCeEEEEEECC
Confidence            21110  001112345899999999999999999999999987643 3333333 4555  68999999999975

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.84  E-value=1.8e-20  Score=132.67  Aligned_cols=125  Identities=14%  Similarity=0.133  Sum_probs=85.8

Q ss_pred             eEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCC-CceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCC
Q 029933           28 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE-MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  106 (185)
Q Consensus        28 ~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~  106 (185)
                      .|+||+|.|+|+++|++||+++|||++..+....+ ......+++....               .....+.+........
T Consensus         6 gl~Hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~l~~~~~~~~~~   70 (144)
T d1zswa1           6 GHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTG---------------SPGTELSFFEIPLVGR   70 (144)
T ss_dssp             SEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEETTEEEEEEEEEESTTC---------------CTTSEEEEEECTTCCB
T ss_pred             ceeeEEEEeCCHHHHHHHHHHHhCCeeEeeeccccCCceeEEEeccccc---------------ceeeEEeecccccccC
Confidence            79999999999999999999999999987754332 2222223322111               0123444443322111


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEeCC---HHHHHHHHHhcCCEEeecCCCCccceEEEEECCCCcEEEEeecCc
Q 029933          107 DPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKT  177 (185)
Q Consensus       107 ~~~~~~~~~~~~~~~g~~hi~~~v~d---v~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~~  177 (185)
                               ...+.++++|++|.|++   ++++.++|++.|+.+.. +....++..+||+|||||.|||+++..
T Consensus        71 ---------~~~~~~~~~Hiaf~v~~~~~l~~~~~~l~~~gv~~~~-~~~~~~~~~~yf~DPdG~~iEl~~~~~  134 (144)
T d1zswa1          71 ---------TYRGTNAITRIGLLVPSEDSLHYWKERFEKFDVKHSE-MTTYANRPALQFEDAEGLRLVLLVSNG  134 (144)
T ss_dssp             ---------CBCCBSEEEEEEEEESCHHHHHHHHHHHHHTTCEECC-SEEETTEEEEEEECTTCCEEEEEECTT
T ss_pred             ---------CccCCCceeEEEEecCCchhHHHHhhhhhccceeeeC-ccccCCeEEEEEECCCCCEEEEEEeCC
Confidence                     11223468999999998   77789999999998744 333345568999999999999998765

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=99.84  E-value=3.3e-20  Score=134.33  Aligned_cols=120  Identities=13%  Similarity=0.194  Sum_probs=86.9

Q ss_pred             CceeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCC
Q 029933           25 NGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT  104 (185)
Q Consensus        25 ~~~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~  104 (185)
                      +.++++||+|.|+|+++|++||+++|||++..+...........+......                 .........   
T Consensus         2 ~~~rldHv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~---   61 (162)
T d1mpya2           2 AAVRFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTK-----------------AHDVAFIHH---   61 (162)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEECTTCCEEEEEEESSSB-----------------SCSEEEEEC---
T ss_pred             CcccccEEEEECCCHHHHHHHHHHccCCEEEEEEccccccceeeeeecccc-----------------ccccccccc---
Confidence            457999999999999999999999999999887665555444444443221                 111222111   


Q ss_pred             CCCCCCCCCCCCCCCCCCceEEEEEeCCHH---HHHHHHHhcCCEEeecCCCCc--cceEEEEECCCCcEEEEeecCc
Q 029933          105 ESDPDFKGYHNGNSEPRGFGHIGITVDDVY---KACERFERLGVEFAKKPDGGK--LKGVAFIKDPDDYWIEIFDLKT  177 (185)
Q Consensus       105 ~~~~~~~~~~~~~~~~~g~~hi~~~v~dv~---~~~~~l~~~G~~~~~~~~~~~--~~~~~~~~DPdG~~iEl~~~~~  177 (185)
                                   ..+.++.|++|.+.+++   +++++|++.|+++...|....  ....+||+|||||.|||+..+.
T Consensus        62 -------------~~~~~~~h~~~~~~~~~~~~~~~~~L~~~gv~~~~~p~~~~~g~~~~~y~~DPdGn~iEl~~~~~  126 (162)
T d1mpya2          62 -------------PEKGRLHHVSFHLETWEDLLRAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSGNRNEVFCGGD  126 (162)
T ss_dssp             -------------SSSSEEEEEEEECSCHHHHHHHHHHHHHHTCCEEEEEEECSSTTCEEEEEECTTSCEEEEEECCC
T ss_pred             -------------CCCCccceeEEEEeeehhhhhHHHHHHHcCCccccCccccCCCCeEEEEEECCCCCEEEEEECCc
Confidence                         11226789999998755   678999999999887664432  2357999999999999998765

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

Probab=99.83  E-value=3.8e-20  Score=130.25  Aligned_cols=119  Identities=14%  Similarity=0.177  Sum_probs=87.2

Q ss_pred             EEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCCCCC
Q 029933           31 QTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDF  110 (185)
Q Consensus        31 h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~  110 (185)
                      .|++.|+|+++|++||+++|||++..+.... ..+..+++..++.                 ...+.+....+...    
T Consensus        12 RVa~pv~Dle~s~~FY~~vLG~~~~~~~~~~-~~~~~~~~~~~~~-----------------~~~l~~~~~~~~~~----   69 (137)
T d1twua_          12 RIARPTGQLDEIIRFYEEGLCLKRIGEFSQH-NGYDGVMFGLPHA-----------------DYHLEFTQYEGGST----   69 (137)
T ss_dssp             EEEEECSCHHHHHHHHTTTSCCCEEEEEEEE-TTEEEEEEESSSS-----------------SEEEEEEEETTCCC----
T ss_pred             EEecccCCHHHHHHHHHhccCCceeeeeccc-cceeEEEecCCCC-----------------ceeeeccccccccc----
Confidence            5777789999999999999999998765432 2355666665442                 34566655543322    


Q ss_pred             CCCCCCCCCCCCceEEEEEeCC---HHHHHHHHHhcCCEEeecCCCCccceEEEEECCCCcEEEEeecCc
Q 029933          111 KGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKT  177 (185)
Q Consensus       111 ~~~~~~~~~~~g~~hi~~~v~d---v~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~~  177 (185)
                        .    ..+.+.+|++|.|++   +++++++|+++|+++..++...+..+.+||+|||||+|||+.+..
T Consensus        70 --~----~~~~~~~hlaf~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~f~DPDG~~Iel~~~~~  133 (137)
T d1twua_          70 --A----PVPHPDSLLVFYVPNAVELAAITSKLKHMGYQEVESENPYWSNGGVTIEDPDGWRIVFMNSKG  133 (137)
T ss_dssp             --C----CCCCTTCEEEEECCCHHHHHHHHHHHHHTTCCEECCSSHHHHSSEEEEECTTCCEEEEESSCC
T ss_pred             --c----cccccCceEEEEeCCHHHHHHHHHHHHHCCCeEeCCCCCCCCceEEEEECCCCCEEEEEcCCC
Confidence              1    112356899999976   788899999999999876654445567999999999999997665

>d1zswa2 d.32.1.10 (A:145-314) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.82  E-value=1.8e-19  Score=131.51  Aligned_cols=117  Identities=11%  Similarity=0.075  Sum_probs=82.2

Q ss_pred             eEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCC
Q 029933           28 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESD  107 (185)
Q Consensus        28 ~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~  107 (185)
                      .|+||+|.|+|++++++||+++|||+++.+..    .+..+++..+..                 ...+.+.......  
T Consensus        12 Gl~HV~L~V~Dle~s~~FY~~vLG~~~~~~~~----~~~~~~~~~~~~-----------------~~~~~~~~~~~~~--   68 (170)
T d1zswa2          12 GMGSVELTVRRLDKMASTLTEIFGYTEVSRND----QEAIFQSIKGEA-----------------FGEIVVKYLDGPT--   68 (170)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCCEEEEECS----SEEEEESSTTCS-----------------TTCEEEEECCSSB--
T ss_pred             CeeeEEEEeCCHHHHHHHHHHHhCCEEEeecC----ceEEEEeccCcc-----------------ceEEEeccccccc--
Confidence            79999999999999999999999999988732    233333332221                 2233332221111  


Q ss_pred             CCCCCCCCCCCCCCCceEEEEEeCC---HHHHHHHHHhcCCEEeecCCCCccceEEEEECCCCcEEEEeecC
Q 029933          108 PDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLK  176 (185)
Q Consensus       108 ~~~~~~~~~~~~~~g~~hi~~~v~d---v~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~  176 (185)
                              ...+.++++||+|.|+|   ++++++++++.|+++.. +.+..+++.+||+|||||+|||+...
T Consensus        69 --------~~~~~~~l~HiAf~V~~~~~l~~~~~~l~~~G~~~~~-~~~~~~~~s~Yf~DPdG~~iEl~t~~  131 (170)
T d1zswa2          69 --------EKPGRGSIHHLAIRVKNDAELAYWEEQVKQRGFHSSG-IIDRFYFKSLYFRESNGILFEIATDG  131 (170)
T ss_dssp             --------CBCCBTCEEEEEEEESSHHHHHHHHHHHHHTTCCCCC-CEECSSEEEEEEECTTCCEEEEEEEE
T ss_pred             --------cccCccccceEEEEeCChHHHHHHHHHHHhcCCCccc-cccCCCEEEEEEECCCCcEEEEEECC
Confidence                    11223478999999986   78889999999998753 33444567899999999999999853

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

Probab=99.82  E-value=1.4e-19  Score=122.69  Aligned_cols=108  Identities=13%  Similarity=0.181  Sum_probs=78.9

Q ss_pred             eeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCC
Q 029933           27 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  106 (185)
Q Consensus        27 ~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~  106 (185)
                      |+|+|+.|.|+|++++++||+++|||++..+..   ..  .+++..+.                  ...+.+....... 
T Consensus         2 m~i~Hi~l~v~Dl~~a~~FY~~~lG~~~~~~~~---~~--~~~~~~~~------------------~~~~~~~~~~~~~-   57 (113)
T d1xqaa_           2 MGIKHLNLTVADVVAAREFLEKYFGLTCSGTRG---NA--FAVMRDND------------------GFILTLMKGKEVQ-   57 (113)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHHHCCEEEEEET---TT--EEEEECTT------------------CCEEEEEECSSCC-
T ss_pred             CcccEEEEEeCCHHHHHHHHHHhhCCEEEEeec---Cc--ceeeeecc------------------eeeeeeeeeeccc-
Confidence            589999999999999999999999999987632   22  22333221                  3455554332111 


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEeCC---HHHHHHHHHhcCCEEeecCCCCccceEEEEECCCCcEEEEe
Q 029933          107 DPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIF  173 (185)
Q Consensus       107 ~~~~~~~~~~~~~~~g~~hi~~~v~d---v~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~  173 (185)
                                   ..+..|++|.|+|   +++++++++++|+++...+.  ..++.+||+|||||.|||+
T Consensus        58 -------------~~~~~h~~f~v~~~~~v~~~~~~l~~~G~~~~~~~~--~~~~~~~~~DPdG~~iEi~  112 (113)
T d1xqaa_          58 -------------YPKTFHVGFPQESEEQVDKINQRLKEDGFLVEPPKH--AHAYTFYVEAPGGFTIEVM  112 (113)
T ss_dssp             -------------CCTTCCEEEECSSHHHHHHHHHHHHHTTCCCCCCEE--C-CEEEEEEETTTEEEEEE
T ss_pred             -------------ccccceeeeeeccccchhhhhhhHHHcCCccccCCC--CceEEEEEECCCCCEEEEE
Confidence                         1255799999987   77789999999998765543  3346799999999999996

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

Probab=99.81  E-value=1.4e-18  Score=120.50  Aligned_cols=123  Identities=37%  Similarity=0.659  Sum_probs=85.4

Q ss_pred             eeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCC
Q 029933           27 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  106 (185)
Q Consensus        27 ~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~  106 (185)
                      .||.|++|.|+|+++|++||+++|||++..........+...........               ...............
T Consensus         2 ~r~~Hv~l~V~Dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~   66 (139)
T d2c21a1           2 RRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEM---------------SSTVLELTYNYGVTS   66 (139)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTT---------------TSCEEEEEEETTCCC
T ss_pred             CceEEEEEEeCCHHHHHHHHHHHhCCEeeccccccccceeeeeecccccc---------------cccccccccccCccc
Confidence            48999999999999999999999999998876544444433333322110               011111111111111


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCEEeecCCCCccceEEEEECCCCcEEEEeecCc
Q 029933          107 DPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKT  177 (185)
Q Consensus       107 ~~~~~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~~  177 (185)
                            .    .......++++.++++...++.+...++++...+..   ...+||+|||||+|||++...
T Consensus        67 ------~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g---~~~~~~~DPdGn~iEl~~~~~  124 (139)
T d2c21a1          67 ------Y----KHDEAYGHIAIGVEDVKELVADMRKHDVPIDYEDES---GFMAFVVDPDGYYIELLNEKT  124 (139)
T ss_dssp             ------C----CCCSSEEEEEEEESCHHHHHHHHHHTTCCEEEECSS---SSEEEEECTTSCEEEEEEHHH
T ss_pred             ------c----cCCCccceeeeehhhHHHHHHHHHHcCCceeeCCCC---cEEEEEECCCCCEEEEEECCC
Confidence                  1    112366789999999999999999999998877632   345999999999999999654

>d1f1ua1 d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=99.80  E-value=1.9e-18  Score=122.74  Aligned_cols=114  Identities=18%  Similarity=0.244  Sum_probs=81.6

Q ss_pred             eeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCC
Q 029933           27 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  106 (185)
Q Consensus        27 ~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~  106 (185)
                      .+|+|+.|.|+|++++++||+++|||++..+..    .. .++.+.+..                ....+.+...  .  
T Consensus        15 ~rl~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~----~~-~~~~~~~~~----------------~~~~~~~~~~--~--   69 (146)
T d1f1ua1          15 VRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDE----NT-IYLRSLEEF----------------IHHNLVLRQG--P--   69 (146)
T ss_dssp             EEEEEEEEEESCHHHHHHHHTTTTCCEEEEECS----SE-EEEECTTCC----------------SSCSEEEEEC--S--
T ss_pred             cEEeEEEEEeCCHHHHHHHHHhccCcEEEeecC----Cc-eeeeccccc----------------ccceeecccc--C--
Confidence            499999999999999999999999999988622    22 222222111                0222333221  1  


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEeC---CHHHHHHHHHhcCCEEeecCCCCc--cceEEEEECCCCcEEEEeecCcc
Q 029933          107 DPDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDGGK--LKGVAFIKDPDDYWIEIFDLKTI  178 (185)
Q Consensus       107 ~~~~~~~~~~~~~~~g~~hi~~~v~---dv~~~~~~l~~~G~~~~~~~~~~~--~~~~~~~~DPdG~~iEl~~~~~~  178 (185)
                                   ..++.|++|.+.   |+++++++|+++|+++...+....  .+..+||+|||||.|||+.....
T Consensus        70 -------------~~~~~h~~~~~~~~~dl~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DPdG~~iEl~~~~e~  133 (146)
T d1f1ua1          70 -------------IAAVAAFAYRVKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRVEDPLGFPYEFFYETEH  133 (146)
T ss_dssp             -------------SCEEEEEEEEESSHHHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECCBCC
T ss_pred             -------------CCCCceeeEeeccchhHHHHHHHHHHcCCceeeccccccCCceEEEEEECCCCcEEEEEEeccc
Confidence                         126789999997   588899999999999887654322  34578999999999999886543

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

Probab=99.80  E-value=9e-19  Score=121.58  Aligned_cols=116  Identities=15%  Similarity=0.169  Sum_probs=81.3

Q ss_pred             eEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCC-ceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCC
Q 029933           28 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEM-KFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  106 (185)
Q Consensus        28 ~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~  106 (185)
                      .|+|++|.|+|++++++||+++|||++..+...... .....++..                   +...+++......  
T Consensus         4 ~i~Hi~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~--   62 (130)
T d1r9ca_           4 GLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLI-------------------GDIWVAIMQGEKL--   62 (130)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHHHCCEEEEEGGGSTTCCSCEEEEEE-------------------TTEEEEEEECCCC--
T ss_pred             cEeEEEEEeCCHHHHHHHHHHhcCCEEEEEcCCccccceeEEEEec-------------------CCEEEeecccccc--
Confidence            699999999999999999999999999877543321 111222221                   1334454432111  


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEeC--CHHHHHHHHHhcCCEEeecCC-CCccceEEEEECCCCcEEEEeecC
Q 029933          107 DPDFKGYHNGNSEPRGFGHIGITVD--DVYKACERFERLGVEFAKKPD-GGKLKGVAFIKDPDDYWIEIFDLK  176 (185)
Q Consensus       107 ~~~~~~~~~~~~~~~g~~hi~~~v~--dv~~~~~~l~~~G~~~~~~~~-~~~~~~~~~~~DPdG~~iEl~~~~  176 (185)
                                  ...+..|++|.++  |+++++++|+++|+++..++. ..+.++.+||+|||||+|||.+..
T Consensus        63 ------------~~~~~~~~~f~v~~~dv~~~~~~l~~~gv~i~~~~~~~~~~~~~~~~~DPdGn~iEl~~~~  123 (130)
T d1r9ca_          63 ------------AERSYNHIAFKIDDADFDRYAERVGKLGLDMRPPRPRVEGEGRSIYFYDDDNHMFELHTGT  123 (130)
T ss_dssp             ------------SSCCSCEEEEECCGGGHHHHHHHHHHHTCCBCCCCC-----CCEEEEECTTSCEEEEECCC
T ss_pred             ------------cccceeeeeecccHHHHHHHHHHHHHCCCeEecCCcccCCCEEEEEEECCCCCEEEEEECC
Confidence                        1125579999875  799999999999999877653 334456799999999999998755

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

Probab=99.78  E-value=7.3e-19  Score=122.83  Aligned_cols=108  Identities=14%  Similarity=0.205  Sum_probs=80.0

Q ss_pred             eEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCC
Q 029933           28 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESD  107 (185)
Q Consensus        28 ~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~  107 (185)
                      .|+|++|.|+|++++++||+++|||++..+..  +    ..++..++.                 +..+.+...  ..  
T Consensus         4 ~l~hv~i~V~Dl~~s~~FY~~vLG~~~~~~~~--~----~~~l~~~~~-----------------~~~l~l~~~--~~--   56 (131)
T d1lgta1           4 SLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTD--N----GDLFRIDSR-----------------AWRIAVQQG--EV--   56 (131)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCCEEEEEET--T----EEEEESSSB-----------------SCSEEEEEC--TT--
T ss_pred             cccEEEEEeCCHHHHHHHHHHhhCCceeecCC--c----ceEEeecCC-----------------ceEEEEecC--CC--
Confidence            69999999999999999999999999987632  1    233443321                 344555422  11  


Q ss_pred             CCCCCCCCCCCCCCCceEEEEEeC---CHHHHHHHHHhcCCEEeecCCC----CccceEEEEECCCCcEEEEeec
Q 029933          108 PDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDG----GKLKGVAFIKDPDDYWIEIFDL  175 (185)
Q Consensus       108 ~~~~~~~~~~~~~~g~~hi~~~v~---dv~~~~~~l~~~G~~~~~~~~~----~~~~~~~~~~DPdG~~iEl~~~  175 (185)
                                   .++.|++|.|.   +++++.++|+++|+++...+..    ....+.+||+|||||.|||+..
T Consensus        57 -------------~~~~h~~f~v~~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~f~DPdGn~iE~~~~  118 (131)
T d1lgta1          57 -------------DDLAFAGYEVADAAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITFADPFGLPLEIYYG  118 (131)
T ss_dssp             -------------CEEEEEEEEESSHHHHHHHHHHHHHTTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEEC
T ss_pred             -------------CCceEEEEEEccHHHHHHHHHHHHHcCCceEECCccccccCCceEEEEEECCCCCEEEEEeC
Confidence                         16789999996   4777899999999999876632    2233578999999999999853

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

Probab=99.78  E-value=4.2e-18  Score=119.77  Aligned_cols=113  Identities=19%  Similarity=0.283  Sum_probs=79.9

Q ss_pred             eEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCC
Q 029933           28 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESD  107 (185)
Q Consensus        28 ~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~  107 (185)
                      .++|++|.|+|++++++||+++|||++..+..    .+.  ++..+                   ...+.+.........
T Consensus         4 ~l~Hi~l~v~d~~~~~~FY~~vLG~~~~~~~~----~~~--~~~~~-------------------~~~~~l~~~~~~~~~   58 (140)
T d1npba_           4 SLNHLTLAVSDLQKSVTFWHELLGLTLHARWN----TGA--YLTCG-------------------DLWVCLSYDEARQYV   58 (140)
T ss_dssp             EEEEEEEEESCHHHHHHHHHTTSCCEEEEEET----TEE--EEEET-------------------TEEEEEEECTTCCCC
T ss_pred             cEeEEEEEeCCHHHHHHHHHHHhCCEEEEEec----ccc--ccccc-------------------cccceeecccccccC
Confidence            79999999999999999999999999987632    121  22221                   123333322222110


Q ss_pred             CCCCCCCCCCCCCCCceEEEEEe--CCHHHHHHHHHhcCCEEeecCCCCccceEEEEECCCCcEEEEeecC
Q 029933          108 PDFKGYHNGNSEPRGFGHIGITV--DDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLK  176 (185)
Q Consensus       108 ~~~~~~~~~~~~~~g~~hi~~~v--~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~  176 (185)
                           .    ....+..|++|.+  +|+++++++|+++|+++...+.  ..++.+||+|||||.|||.+..
T Consensus        59 -----~----~~~~~~~h~~~~~~~~d~~~~~~~l~~~Gv~~~~~~~--~~~~~~~~~DPdGn~iEi~~~~  118 (140)
T d1npba_          59 -----P----PQESDYTHYAFTVAEEDFEPLSQRLEQAGVTIWKQNK--SEGASFYFLDPDGHKLELHVGS  118 (140)
T ss_dssp             -----C----GGGSCSCEEEEECCHHHHHHHHHHHHHTTCCEEECCC--SSSEEEEEECTTCCEEEEEECC
T ss_pred             -----C----CcCCccceeeeechHHHHHHHHHHHHHCCCeEeecCC--CCceEEEEECCCCCEEEEEECC
Confidence                 0    1122567888888  5799999999999999987664  3456799999999999997754

>d2pjsa1 d.32.1.2 (A:3-113) Uncharacterized protein Atu1953 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Uncharacterized protein Atu1953
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.78  E-value=1.1e-18  Score=117.58  Aligned_cols=106  Identities=17%  Similarity=0.205  Sum_probs=75.0

Q ss_pred             EEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCCCCC
Q 029933           31 QTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDF  110 (185)
Q Consensus        31 h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~  110 (185)
                      ++.|.|+|+++|++||+++|||++.....    .+..+....                    .....+.... ...    
T Consensus         5 ~~~l~v~d~~~a~~FY~~~lG~~~~~~~~----~~~~~~~~~--------------------~~~~~~~~~~-~~~----   55 (111)
T d2pjsa1           5 VANIATPEPARAQAFYGDILGMPVAMDHG----WIVTHASPL--------------------EAHAQVSFAR-EGG----   55 (111)
T ss_dssp             EEEEECSCGGGGHHHHTTTTCCCEEEECS----SEEEEEEEE--------------------EEEEEEEEES-SSB----
T ss_pred             EEEEEeCCHHHHHHHHHHhhCCceeeccc----ceeEecccc--------------------ccceeeeccc-ccC----
Confidence            68899999999999999999999887632    222222211                    1112221111 110    


Q ss_pred             CCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCEEeecCCCCc-cceEEEEECCCCcEEEEe
Q 029933          111 KGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGK-LKGVAFIKDPDDYWIEIF  173 (185)
Q Consensus       111 ~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~~~~~-~~~~~~~~DPdG~~iEl~  173 (185)
                        .      .....|+.|.++|+++++++++++|+++..+|.... +.+.+|++|||||+|||+
T Consensus        56 --~------~~~~~~~~~~~~dvd~~~~~l~~~g~~~~~~p~~~~~g~~~~~~~DP~Gn~iei~  111 (111)
T d2pjsa1          56 --S------GTDVPDLSIEVDNFDEVHARILKAGLPIEYGPVTEAWGVQRLFLRDPFGKLINIL  111 (111)
T ss_dssp             --T------TBCCCSEEEEESCHHHHHHHHHHTTCCCSEEEEECTTSCEEEEEECTTSCEEEEE
T ss_pred             --C------CCceeEEEEEecCHHHHHHHHHhhccccccCCeEcCCCcEEEEEECCCCCEEEeC
Confidence              0      113468999999999999999999999988775543 346899999999999996

>d1klla_ d.32.1.2 (A:) Mitomycin resistance protein D, MRD {Streptomyces lavendulae [TaxId: 1914]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Mitomycin resistance protein D, MRD
species: Streptomyces lavendulae [TaxId: 1914]

Probab=99.77  E-value=4.9e-19  Score=122.79  Aligned_cols=121  Identities=19%  Similarity=0.189  Sum_probs=80.6

Q ss_pred             eEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCC-CC
Q 029933           28 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT-ES  106 (185)
Q Consensus        28 ~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~-~~  106 (185)
                      ||+|++|.|+|+++|++||++ ||+.+.......  .+.......                    ...+.+...... ..
T Consensus         2 ri~hv~l~V~D~~~s~~FY~~-Lg~~~~~~~~~~--~~~~~~~~~--------------------~~~~~~~~~~~~~~~   58 (128)
T d1klla_           2 RISLFAVVVEDMAKSMEFYRK-MGVEIPAEADSA--PHTEAVLDG--------------------GIRLAWDTVETVRSY   58 (128)
T ss_dssp             CCCEEEEEESCHHHHHHHHHH-TTCCCCTTGGGC--SEEEEECGG--------------------GCEEEEEEHHHHHHH
T ss_pred             eEeEEEEEcCCHHHHHHHHHH-hCCccccccccc--cceeeeccc--------------------eeeeeeccccccccc
Confidence            789999999999999999977 899877654322  221211211                    223443321110 00


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEeCC---HHHHHHHHHhcCCEEeecCCCCcc-ceEEEEECCCCcEEEEeecC
Q 029933          107 DPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGGKL-KGVAFIKDPDDYWIEIFDLK  176 (185)
Q Consensus       107 ~~~~~~~~~~~~~~~g~~hi~~~v~d---v~~~~~~l~~~G~~~~~~~~~~~~-~~~~~~~DPdG~~iEl~~~~  176 (185)
                      ...     .......+..|++|.|++   +++++++|+++|+++..+|....+ .+.+||+|||||+|||+++.
T Consensus        59 ~~~-----~~~~~~~~~~~l~~~v~~~~~l~~~~~~l~~~G~~~~~~p~~~~~G~~~~~~~DPdG~~iel~~p~  127 (128)
T d1klla_          59 DPE-----WQAPTGGHRFAIAFEFPDTASVDKKYAELVDAGYEGHLKPWNAVWGQRYAIVKDPDGNVVDLFAPL  127 (128)
T ss_dssp             CTT-----CCCCCSSCSCEEEEECSSHHHHHHHHHHHHHTTCEEEEEEEECTTSEEEEEEECTTSCEEEEEEEC
T ss_pred             CCC-----CCCCccccceeEeeeeccchhhHHHHHHHHhccCccccCCeEcCCCcEEEEEECCCCCEEEEEecC
Confidence            000     001122345799999987   777899999999999988865433 46899999999999999864

>d1nkia_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.77  E-value=4.8e-18  Score=118.59  Aligned_cols=109  Identities=18%  Similarity=0.227  Sum_probs=77.2

Q ss_pred             eEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCC
Q 029933           28 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESD  107 (185)
Q Consensus        28 ~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~  107 (185)
                      .|+||+|.|+|++++++||+++||+++..+..  .  .  .++..+                   ...+.......... 
T Consensus         4 ~i~Hv~l~v~d~~~~~~FY~~~lG~~~~~~~~--~--~--~~~~~~-------------------~~~~~~~~~~~~~~-   57 (134)
T d1nkia_           4 GLNHLTLAVADLPASIAFYRDLLGFRLEARWD--Q--G--AYLELG-------------------SLWLCLSREPQYGG-   57 (134)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCCEEEEEET--T--E--EEEEET-------------------TEEEEEEECTTCCC-
T ss_pred             cEeEEEEEeCCHHHHHHHHHHhhCCeEEEecc--c--e--eeeecC-------------------CeEEEEeeeccccc-
Confidence            69999999999999999999999999887632  1  1  222221                   23444433322111 


Q ss_pred             CCCCCCCCCCCCCCCceEEEEEe--CCHHHHHHHHHhcCCEEeecCCCCccceEEEEECCCCcEEEEeec
Q 029933          108 PDFKGYHNGNSEPRGFGHIGITV--DDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDL  175 (185)
Q Consensus       108 ~~~~~~~~~~~~~~g~~hi~~~v--~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~  175 (185)
                                 ...+..|++|.+  +|+++++++|+++|+++...+.  ..++.+||+|||||.|||+..
T Consensus        58 -----------~~~~~~h~~~~~~~~dl~~~~~~l~~~G~~~~~~~~--~~~~~~~f~DPdGn~iEl~~~  114 (134)
T d1nkia_          58 -----------PAADYTHYAFGIAAADFARFAAQLRAHGVREWKQNR--SEGDSFYFLDPDGHRLEAHVG  114 (134)
T ss_dssp             -----------CCSSSCEEEEEECHHHHHHHHHHHHHTTCCEEECCC--SSSCEEEEECTTCCEEEEESC
T ss_pred             -----------cccccccchhccccchHHHHHHHHHHCCCcCccCCC--cceeEEEEECCCCCEEEEEEC
Confidence                       111345666655  6899999999999999877653  334579999999999999774

>d1kw3b1 d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=99.76  E-value=2.6e-18  Score=120.18  Aligned_cols=108  Identities=17%  Similarity=0.263  Sum_probs=79.8

Q ss_pred             eEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCC
Q 029933           28 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESD  107 (185)
Q Consensus        28 ~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~  107 (185)
                      +++|++|.|+|++++++||+++|||++..+..  +    ..++..++.                 +..+.+...  ..  
T Consensus         4 ~L~hv~i~v~Dl~~s~~FY~~vLG~~~~~~~~--~----~~~l~~~~~-----------------~~~l~~~~~--~~--   56 (132)
T d1kw3b1           4 RLGYLGFAVKDVPAWDHFLTKSVGLMAAGSAG--D----AALYRADQR-----------------AWRIAVQPG--EL--   56 (132)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCCEEEEEET--T----EEEEESSSB-----------------SCSEEEEEC--TT--
T ss_pred             cccEEEEEeCCHHHHHHHHHHHhCCceecccc--c----eeeeeeeec-----------------ceeeeeecc--CC--
Confidence            89999999999999999999999999887632  1    234443321                 334444321  11  


Q ss_pred             CCCCCCCCCCCCCCCceEEEEEeC---CHHHHHHHHHhcCCEEeecCCCC----ccceEEEEECCCCcEEEEeec
Q 029933          108 PDFKGYHNGNSEPRGFGHIGITVD---DVYKACERFERLGVEFAKKPDGG----KLKGVAFIKDPDDYWIEIFDL  175 (185)
Q Consensus       108 ~~~~~~~~~~~~~~g~~hi~~~v~---dv~~~~~~l~~~G~~~~~~~~~~----~~~~~~~~~DPdG~~iEl~~~  175 (185)
                                   .++.|++|.|+   |++++.++++++|+++...+...    .....+||+|||||.|||+..
T Consensus        57 -------------~~~~h~~f~v~~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~DPdGn~iE~~~~  118 (132)
T d1kw3b1          57 -------------DDLAYAGLEVDDAAALERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQDPFGLPLEIYYG  118 (132)
T ss_dssp             -------------CEEEEEEEECSSHHHHHHHHHHHHHHTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEEC
T ss_pred             -------------CCceEEEEEeccHHHHHHHHHHHHHcCCCceecCccccccCCcceEEEEECCCCCEEEEEEC
Confidence                         16789999996   57889999999999998765321    223578999999999999854

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=99.76  E-value=1.4e-17  Score=117.60  Aligned_cols=114  Identities=18%  Similarity=0.325  Sum_probs=77.9

Q ss_pred             eeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCC
Q 029933           27 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  106 (185)
Q Consensus        27 ~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~  106 (185)
                      ++|+||.|.|+|++++++||+++|||++..+..  ...+  ........                ....+.+...  .. 
T Consensus         6 ~rl~Hv~l~v~D~~~s~~FY~~vLG~~~~~~~~--~~~~--~~~~~~~~----------------~~~~~~~~~~--~~-   62 (145)
T d1mpya1           6 MRPGHVQLRVLDMSKALEHYVELLGLIEMDRDD--QGRV--YLKAWTEV----------------DKFSLVLREA--DE-   62 (145)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHHTTCCEEEEECT--TSCE--EEECTTCC----------------BSCSEEEEEC--SS-
T ss_pred             cEeeeEEEEeCCHHHHHHHHHHhhCCEEEEeec--cCcc--ceeccccc----------------ceeecccccc--Cc-
Confidence            589999999999999999999999999887632  2222  11111110                0223333221  10 


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEe---CCHHHHHHHHHhcCCEEeecCCCC--ccceEEEEECCCCcEEEEeecCc
Q 029933          107 DPDFKGYHNGNSEPRGFGHIGITV---DDVYKACERFERLGVEFAKKPDGG--KLKGVAFIKDPDDYWIEIFDLKT  177 (185)
Q Consensus       107 ~~~~~~~~~~~~~~~g~~hi~~~v---~dv~~~~~~l~~~G~~~~~~~~~~--~~~~~~~~~DPdG~~iEl~~~~~  177 (185)
                                    .+..|+++.+   +|+++++++|+++|+++...+...  ..++.+||+|||||.|||++...
T Consensus        63 --------------~~~~~~~~~~~~~~dl~~~~~~L~~~g~~~~~~~~~~~~g~~~~~~f~DPdG~~iEl~~~~e  124 (145)
T d1mpya1          63 --------------PGMDFMGFKVVDEDALRQLERDLMAYGCAVEQLPAGELNSCGRRVRFQAPSGHHFELYADKE  124 (145)
T ss_dssp             --------------CEEEEEEEEESCHHHHHHHHHHHHHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESCBC
T ss_pred             --------------ccceeeeeeehhHHHHHHHHHHHHHCCCcEEECCCcccCCceEEEEEECCCCCEEEEEEecc
Confidence                          1345666665   478999999999999987665432  23468999999999999998654

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=1.8e-18  Score=123.14  Aligned_cols=131  Identities=12%  Similarity=0.123  Sum_probs=90.8

Q ss_pred             eeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCC--CceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCC
Q 029933           27 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE--MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT  104 (185)
Q Consensus        27 ~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~  104 (185)
                      ..|+||+|.|+|+++|++||+++|||+++.......  .....+.+..+                   ...+++......
T Consensus        10 ~~~dHi~i~V~Dl~~a~~fY~~~lGf~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~l~~~~~~   70 (149)
T d1sqia1          10 LHFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQG-------------------KIVFVLCSALNP   70 (149)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEEET-------------------TEEEEEEEESST
T ss_pred             eeEeEEEEEcCCHHHHHHHHhhccceEEEEEecccCCceEEEEEEecCC-------------------cEEEEEEeccCC
Confidence            579999999999999999999999999987654322  22223333322                   446666544332


Q ss_pred             CCCCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCEEeecCCC---Cccc-eEEEEECCCCcEEEEeecCccc
Q 029933          105 ESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDG---GKLK-GVAFIKDPDDYWIEIFDLKTIG  179 (185)
Q Consensus       105 ~~~~~~~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~~~---~~~~-~~~~~~DPdG~~iEl~~~~~~~  179 (185)
                      .. ......  ....+.|+.||||.|+|+++++++|+++|+++..+|..   ..+. ..++++.|+|.+++|+|++.++
T Consensus        71 ~~-~~~~~~--~~~~g~G~~hiaf~V~di~~~~~~l~~~G~~~~~~P~~~~d~~G~v~~a~i~~~g~~~~~lier~~~~  146 (149)
T d1sqia1          71 WN-KEMGDH--LVKHGDGVKDIAFEVEDCEHIVQKARERGAKIVREPWVEEDKFGKVKFAVLQTYGDTTHTLVEKINYT  146 (149)
T ss_dssp             TC-HHHHHH--HHHHCSEEEEEEEEEECHHHHHHHHHHHTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEESCC
T ss_pred             CC-chhhhh--hhhCCCeEEEEEEEeccHHHHHHHHHHCCCEEccCCeEEECCCCeEEEEEEECCCCCEEEEEEeCCCc
Confidence            21 000000  00113488999999999999999999999999988742   2222 3678888889999999988764

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=99.75  E-value=1.8e-17  Score=121.36  Aligned_cols=115  Identities=15%  Similarity=0.173  Sum_probs=81.2

Q ss_pred             eeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCC
Q 029933           27 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTES  106 (185)
Q Consensus        27 ~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~  106 (185)
                      +||+|++|.|+|++++++|| ++|||++..+..........+++..+..                 +..+.+....    
T Consensus         4 ~rl~Hv~l~v~Dle~s~~FY-e~LGf~~~d~~~~~~~~~~~~~~~~~~~-----------------~~~l~~~~~~----   61 (176)
T d1f1ua2           4 VRLDHFNQVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQT-----------------VHDTALTGGN----   61 (176)
T ss_dssp             CEEEEEEEEESCHHHHHHHH-HHTTCEEEEEEECTTCCEEEEEEESSSS-----------------SCSEEEEESS----
T ss_pred             eEeeeEEEEcCCHHHHHHHH-HHCCCEEEEEEecCCcceeeeeeccCcc-----------------ccceeccccc----
Confidence            48999999999999999999 6899999877665555555556554321                 3444443221    


Q ss_pred             CCCCCCCCCCCCCCCCceEEEEEeCCH---HHHHHHHHhcCCEEe--ecCCCC--ccceEEEEECCCCcEEEEeecC
Q 029933          107 DPDFKGYHNGNSEPRGFGHIGITVDDV---YKACERFERLGVEFA--KKPDGG--KLKGVAFIKDPDDYWIEIFDLK  176 (185)
Q Consensus       107 ~~~~~~~~~~~~~~~g~~hi~~~v~dv---~~~~~~l~~~G~~~~--~~~~~~--~~~~~~~~~DPdG~~iEl~~~~  176 (185)
                                   ..+++|++|.+.++   ....++|+++|+...  ..|...  .....+||+|||||+|||+...
T Consensus        62 -------------~~~~~H~~f~~~~~~~v~~~~~~l~~~g~~~~~~~~p~~h~~g~~~~~Y~~DPdG~~iEl~~~~  125 (176)
T d1f1ua2          62 -------------GPRMHHVAFATHEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDGHRIEIYTQD  125 (176)
T ss_dssp             -------------BSEEEEEEEECSSHHHHHHHHHHHHHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEECC
T ss_pred             -------------CCCccceeEEeccchhHHHHHHHHHHcCCceeeeecccccCCCCceEEEEECCCCCEEEEEeCC
Confidence                         12679999999864   456678899998643  233221  1234789999999999998754

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=99.74  E-value=1.2e-18  Score=126.04  Aligned_cols=133  Identities=17%  Similarity=0.116  Sum_probs=92.2

Q ss_pred             eEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecC--CCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCC
Q 029933           28 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFP--EMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTE  105 (185)
Q Consensus        28 ~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~  105 (185)
                      +|+||+|.|+|+++|++||+++|||+++......  ......+.+..+                   ...+++.......
T Consensus         7 ~idHv~i~V~D~~~a~~fY~~~lGf~~v~~~~~~~~~~~~~~~~l~~~-------------------~~~i~l~~~~~~~   67 (163)
T d1t47a1           7 GMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNG-------------------SARFVLTSVIKPA   67 (163)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEET-------------------TEEEEEEEESSCC
T ss_pred             eEeEEEEEeCCHHHHHHHHHHHhCCeEEeeecccccceeEEEEEEecC-------------------CEEEEEeccCCCC
Confidence            8999999999999999999999999998765322  222333334332                   4566665543322


Q ss_pred             CCCC--CCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCEEeecCCC---Ccc-ceEEEEECCCCcEEEEeecCccc
Q 029933          106 SDPD--FKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDG---GKL-KGVAFIKDPDDYWIEIFDLKTIG  179 (185)
Q Consensus       106 ~~~~--~~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~~~---~~~-~~~~~~~DPdG~~iEl~~~~~~~  179 (185)
                      ....  ..+..  .....|+.||||.|+|+++++++|+++|+++..+|..   ..+ -..+++++|+|..++|+|+..++
T Consensus        68 ~~~~~~~~~~~--~~~g~G~~hiaf~VdDid~a~~~l~~~Ga~~~~~P~~~~d~~G~v~~a~I~~~g~~~~~lier~~~~  145 (163)
T d1t47a1          68 TPWGHFLADHV--AEHGDGVVDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEHGTVVLAAIATYGKTRHTLVDRTGYD  145 (163)
T ss_dssp             SHHHHHHHHHH--HHHCSEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEEEEC
T ss_pred             Cccccccchhh--hcCCCceEEEEEeeCCHHHHHHHHHHCCCeEEecCcceeCCCCEEEEEEEecCCCceEEEEeccCCC
Confidence            1000  00000  0012388999999999999999999999999988743   111 24789999999999999987765


Q ss_pred             cc
Q 029933          180 KI  181 (185)
Q Consensus       180 ~~  181 (185)
                      -.
T Consensus       146 g~  147 (163)
T d1t47a1         146 GP  147 (163)
T ss_dssp             SS
T ss_pred             Cc
Confidence            43

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.72  E-value=5e-17  Score=117.69  Aligned_cols=133  Identities=17%  Similarity=0.093  Sum_probs=86.9

Q ss_pred             eeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCc--eEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCC
Q 029933           27 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMK--FSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT  104 (185)
Q Consensus        27 ~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~  104 (185)
                      .+++||+|.|+|++++++||+++|||+++.+.......  .....++.+                   ...+.+......
T Consensus        11 ~~~dHv~i~V~Dle~a~~fY~~~LGf~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~v~~~~~~~   71 (167)
T d1sqda1          11 KRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSG-------------------DLRFLFTAPYSP   71 (167)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHHHTCEEEEEESGGGTCSSEEEEEEEET-------------------TEEEEEEEECCG
T ss_pred             ceEeEEEEEeCCHHHHHHHHHHHhCCeEEEEeeccCCCeeEEEEEeeCC-------------------CeeEEEeccccc
Confidence            37999999999999999999999999998775433221  111122211                   122222111110


Q ss_pred             CCC-----CCCCCCCCCC----------CCCCCceEEEEEeCCHHHHHHHHHhcCCEEeecCCCCcc-ceEEEEECCCCc
Q 029933          105 ESD-----PDFKGYHNGN----------SEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKL-KGVAFIKDPDDY  168 (185)
Q Consensus       105 ~~~-----~~~~~~~~~~----------~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~~~~~~-~~~~~~~DPdG~  168 (185)
                      ...     ..........          ....|+.||||.|+|+++++++|+++|+++..+|..... .+.++++.+++.
T Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~Hiaf~VdDi~aa~~~l~~~G~~~~~~P~~~~~~~~~a~I~~~gd~  151 (167)
T d1sqda1          72 SLSAGEIKPTTTASIPSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGAIPSSPPIVLNEAVTIAEVKLYGDV  151 (167)
T ss_dssp             GGTTTCCGGGCCCSSTTCCHHHHHHHHHHHCSEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEEETTTEEEEEEEEETTE
T ss_pred             cccccccccccccccccCCcchHHHhhhccCCCceEEEEEeCCHHHHHHHHHHCCCEEecCCeecCCCEEEEEEEccCCc
Confidence            000     0000000000          012388999999999999999999999999998865433 356889999999


Q ss_pred             EEEEeecCcc
Q 029933          169 WIEIFDLKTI  178 (185)
Q Consensus       169 ~iEl~~~~~~  178 (185)
                      .++|++++.+
T Consensus       152 ~~~~v~r~~~  161 (167)
T d1sqda1         152 VLRYVSYKAE  161 (167)
T ss_dssp             EEEEEEECCC
T ss_pred             EEEEEecCCC
Confidence            9999998764

>d1kw3b2 d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=99.71  E-value=3.8e-17  Score=117.39  Aligned_cols=119  Identities=20%  Similarity=0.206  Sum_probs=79.1

Q ss_pred             CCceeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeec---CCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEee
Q 029933           24 TNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDF---PEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTH  100 (185)
Q Consensus        24 ~~~~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~  100 (185)
                      +....|+|++|.|+|++++++||+++|||++......   ........++..+..                 +..+.+..
T Consensus         6 ~~~~GlgHv~l~v~D~e~t~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~h~~a~~~   68 (156)
T d1kw3b2           6 TGDQGIGHFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNGR-----------------HHTIALAA   68 (156)
T ss_dssp             CGGGCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSB-----------------SCSEEEEC
T ss_pred             CCCCCcceEEEecCCHHHHHHHHHHhcCceeeeEEeeccCCCCcceeEEEeeccc-----------------cceeeecc
Confidence            3445799999999999999999999999998765321   122223334433221                 23333321


Q ss_pred             cCCCCCCCCCCCCCCCCCCCCCceEEEEEeCC---HHHHHHHHHhcCCEEeecCCCC-ccceEEEEECCCCc-EEEEeec
Q 029933          101 NWGTESDPDFKGYHNGNSEPRGFGHIGITVDD---VYKACERFERLGVEFAKKPDGG-KLKGVAFIKDPDDY-WIEIFDL  175 (185)
Q Consensus       101 ~~~~~~~~~~~~~~~~~~~~~g~~hi~~~v~d---v~~~~~~l~~~G~~~~~~~~~~-~~~~~~~~~DPdG~-~iEl~~~  175 (185)
                      .                +.+.+++||+|.|++   +.+++++|+++|+.+....+.. ....++|++||||| .+|+...
T Consensus        69 ~----------------~~~~gl~Hiaf~v~~~ddv~~~~d~l~~~G~~~~g~~rH~~~~~~s~Y~~DP~G~~~~E~~~~  132 (156)
T d1kw3b2          69 F----------------PIPKRIHHFMLQANTIDDVGYAFDRLDAAGRITSLLGRHTNDQTLSFYADTPSPMIEVEFGWG  132 (156)
T ss_dssp             C----------------SCSSSEEEEEEEBSSHHHHHHHHHHHHHTTCBCBCSEEESSSCCEEEEEECSSTTCEEEEEEC
T ss_pred             C----------------CCCCceeEEEEECCCHHHHHHHHHHHHhcCCceecCcccCCCCeEEEEEECCCCCeEEEEecC
Confidence            1                112378999999976   5557899999998754433322 22357999999998 5898663

>d1ecsa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.71  E-value=2.5e-16  Score=107.61  Aligned_cols=106  Identities=18%  Similarity=0.292  Sum_probs=73.9

Q ss_pred             EEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCCCCCC
Q 029933           32 TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFK  111 (185)
Q Consensus        32 ~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~  111 (185)
                      ..|.|+|+++|++||++ |||++.....    .+......                     ...+.+........     
T Consensus         6 p~l~v~Dl~~s~~FY~~-LGf~~~~~~~----~~~~~~~~---------------------~~~~~~~~~~~~~~-----   54 (120)
T d1ecsa_           6 PNLPSRDFDSTAAFYER-LGFGIVFRDA----GWMILQRG---------------------DLMLEFFAHPGLDP-----   54 (120)
T ss_dssp             EEEEESCHHHHHHHHHT-TTCEEEEECS----SEEEEEET---------------------TEEEEEEECTTCCG-----
T ss_pred             EEEEeCCHHHHHHHHHH-cCCeeEEecC----ceeeeecc---------------------eecccccccccccc-----
Confidence            35999999999999988 9999987622    22222221                     23445543322211     


Q ss_pred             CCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCEEeec-------CCC-CccceEEEEECCCCcEEEEeecC
Q 029933          112 GYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKK-------PDG-GKLKGVAFIKDPDDYWIEIFDLK  176 (185)
Q Consensus       112 ~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~-------~~~-~~~~~~~~~~DPdG~~iEl~~~~  176 (185)
                       .       ....++++.++++++++++++++|+++...       +.. .++.+.+||+|||||+|||+|.+
T Consensus        55 -~-------~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~~~~~DPDGn~iei~q~d  119 (120)
T d1ecsa_          55 -L-------ASWFSCCLRLDDLAEFYRQCKSVGIQETSSGYPRIHAPELQGWGGTMAALVDPDGTLLRLIQNE  119 (120)
T ss_dssp             -G-------GCCCEEEEEESCHHHHHHHHHHTTCCBCSSSSSEEEEEEECTTSSEEEEEECTTSCEEEEEECC
T ss_pred             -C-------CCCcEEEEEECCHHHHHHHHhhhhhhhccccccccccceecCCCcEEEEEECCCCCEEEEEEcc
Confidence             1       133689999999999999999999887543       222 23346899999999999999864

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=99.69  E-value=1.5e-16  Score=115.97  Aligned_cols=134  Identities=13%  Similarity=0.052  Sum_probs=88.9

Q ss_pred             eeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCC--CceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCC
Q 029933           27 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE--MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGT  104 (185)
Q Consensus        27 ~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~  104 (185)
                      ++++||+|.|+|++++++||+++|||+++.+.....  ..+....++.+                   ...+.+......
T Consensus        12 ~~~~Hi~i~V~D~e~a~~FY~~~LGf~~v~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~   72 (172)
T d1sp8a1          12 LAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSG-------------------SLSFLFTAPYAH   72 (172)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHHHTCCEEEEESGGGTCCSEEEEEEEET-------------------TEEEEEEEECCS
T ss_pred             CEEEEEEEEeCCHHHHHHHHHHhhCceEEEEecccccceeEEEEEeccC-------------------CeeeEEeeccCC
Confidence            489999999999999999999999999987654332  22222223321                   123333221111


Q ss_pred             CCCCCCCCCCCCC---------CCCCCceEEEEEeCCHHHHHHHHHhcCCEEeecCCCCcc-ceEEEEECCCCcEEEEee
Q 029933          105 ESDPDFKGYHNGN---------SEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKL-KGVAFIKDPDDYWIEIFD  174 (185)
Q Consensus       105 ~~~~~~~~~~~~~---------~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~~~~~~-~~~~~~~DPdG~~iEl~~  174 (185)
                      .............         ....|+.||||.|+|+++++++|+++|+++..+|..... .+.++++.+.+.+++|++
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~g~Gi~Hiaf~VdDi~aa~~~l~~~Ga~~~~~P~~~~~g~~~a~v~~~g~~~~~lve  152 (172)
T d1sp8a1          73 GADAATAALPSFSAAAARRFAADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPVDLGRGFRLAEVELYGDVVLRYVS  152 (172)
T ss_dssp             SCCGGGCSSTTCCHHHHHHHHHHHSSEEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEEETTEEEEEEEEETTEEEEEEE
T ss_pred             CchhhhcccccCCcchhhhhhhhcCCceEEEEEeeCcHHHHHHHHHHCcCEeccCCccCCCCEEEEEEECCCCcEEEEEe
Confidence            1000000000000         012388999999999999999999999999998865333 357888888888999999


Q ss_pred             cCccc
Q 029933          175 LKTIG  179 (185)
Q Consensus       175 ~~~~~  179 (185)
                      +.+..
T Consensus       153 ~~~~~  157 (172)
T d1sp8a1         153 YPDGA  157 (172)
T ss_dssp             CCTTG
T ss_pred             cCCCC
Confidence            88743

>d1jifa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptomyces verticillus [TaxId: 29309]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptomyces verticillus [TaxId: 29309]

Probab=99.67  E-value=8.6e-16  Score=104.87  Aligned_cols=105  Identities=11%  Similarity=0.032  Sum_probs=74.5

Q ss_pred             EEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCCCCC
Q 029933           31 QTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDF  110 (185)
Q Consensus        31 h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~  110 (185)
                      ...|.|+|+++|++||+++|||++..+..    .+  .++..+                   ...+.+.......     
T Consensus         8 ~pvL~v~Dl~~s~~FY~~vLG~~~~~~~~----~~--~~~~~~-------------------~~~l~l~~~~~~~-----   57 (122)
T d1jifa_           8 VPVLTAVDVPANVSFWVDTLGFEKDFGDR----DF--AGVRRG-------------------DIRLHISRTEHQI-----   57 (122)
T ss_dssp             EEEEEESSHHHHHHHHHHTTCCEEEEECS----SE--EEEEET-------------------TEEEEEEECSCHH-----
T ss_pred             EEEEEcCCHHHHHHHHHhhhCCceEecCC----ce--eEeeee-------------------eeeeeeecccccc-----
Confidence            34599999999999999999999887622    22  222221                   3456665432211     


Q ss_pred             CCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCEEeecC--------CCCccceEEEEECCCCcEEEEee
Q 029933          111 KGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP--------DGGKLKGVAFIKDPDDYWIEIFD  174 (185)
Q Consensus       111 ~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~--------~~~~~~~~~~~~DPdG~~iEl~~  174 (185)
                               .....++.+.++|+++++++++++++.....+        ...++++.+|++|||||+|||.+
T Consensus        58 ---------~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~DPdGn~ief~~  120 (122)
T d1jifa_          58 ---------VADNTSAWIEVTDPDALHEEWARAVSTDYADTSGPAMTPVGESPAGREFAVRDPAGNCVHFTA  120 (122)
T ss_dssp             ---------HHTTCEEEEEESCHHHHHHHHHTTSCSCTTCTTSCEECCCEEETTEEEEEEECTTCCEEEEEE
T ss_pred             ---------ccceeEEEEeechhHHHHHHHHhhcceEEeeccccccCccccCCCeEEEEEECCCCCEEEEEe
Confidence                     01336899999999999999999988765432        12234568999999999999975

>d1xrka_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptoalloteichus hindustanus [TaxId: 2017]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptoalloteichus hindustanus [TaxId: 2017]

Probab=99.64  E-value=5.9e-15  Score=100.05  Aligned_cols=107  Identities=10%  Similarity=0.070  Sum_probs=74.0

Q ss_pred             EEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCCC
Q 029933           29 MQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDP  108 (185)
Q Consensus        29 i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~  108 (185)
                      -.+..|.|+|+++|++||+++|||++..+..    .+.....+                     ...+.+.......   
T Consensus         5 ~~~pvL~v~D~~~s~~FY~~~LG~~~~~~~~----~~~~~~~~---------------------~~~l~~~~~~~~~---   56 (120)
T d1xrka_           5 SAVPVLTARDVAEAVEFWTDRLGFSRVFVED----DFAGVVRD---------------------DVTLFISAVQDQV---   56 (120)
T ss_dssp             EEEEEEEESCHHHHHHHHHHTTCCEEEEECS----SEEEEEET---------------------TEEEEEEECSCTT---
T ss_pred             eEEEEEEECCHHHHHHHHHHhhCCeEEEECC----CeeEEecc---------------------cceeecccccccc---
Confidence            3456799999999999999999999887632    22222222                     3455554332211   


Q ss_pred             CCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCEEee--------cCCCCccceEEEEECCCCcEEEEee
Q 029933          109 DFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAK--------KPDGGKLKGVAFIKDPDDYWIEIFD  174 (185)
Q Consensus       109 ~~~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~--------~~~~~~~~~~~~~~DPdG~~iEl~~  174 (185)
                                 ..+..++.+.+++++.+++.+.+.+.....        ++....+++.+||+|||||+||+++
T Consensus        57 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~DPdGn~ief~~  119 (120)
T d1xrka_          57 -----------VPDNTQAWVWVRGLDELYAEWSEVVSTNFRDASGPAMTEIVEQPWGREFALRDPAGNCVHFVA  119 (120)
T ss_dssp             -----------TGGGCEEEEEEECHHHHHHHHTTTSBSCTTTCSSCEECCCEEETTEEEEEEECTTCCEEEEEE
T ss_pred             -----------CCCCceEEEeeccHHHHHHHHHHhhhHHhhhcccccccCceecCCEEEEEEECCCCCEEEEEE
Confidence                       114468889999999998888766655433        3333445678999999999999985

>d1xy7a_ d.32.1.9 (A:) Hypothetical protein At5g48480 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein At5g48480
domain: Hypothetical protein At5g48480
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.55  E-value=3.1e-14  Score=99.04  Aligned_cols=118  Identities=9%  Similarity=-0.029  Sum_probs=73.1

Q ss_pred             EEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCc-------eEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCC
Q 029933           31 QTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMK-------FSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWG  103 (185)
Q Consensus        31 h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~  103 (185)
                      ++.|.|.|+++|++||+++||+++..+...++..       .....+..+                   ...+.+.....
T Consensus        10 ~l~v~~~~~~eAi~FY~~~fG~~~~~~~~~~~~~~~~~~~~~~~a~l~~~-------------------~~~~~~~~~~~   70 (135)
T d1xy7a_          10 MLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLA-------------------GSSFVVCDVSS   70 (135)
T ss_dssp             EEEECTTCHHHHHHHHHHHHCCEEC---------------CCCEEEEEET-------------------TEEEEEEEGGG
T ss_pred             EEEEECCCHHHHHHHHHHHhCCEEEEEEecCCccccccCCcEEEEEEEEC-------------------Ceeeecccccc
Confidence            3455556999999999999999988764432211       111112211                   23344432211


Q ss_pred             CCCCCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCEEeecCCCCcc-ceEEEEECCCCcEEEEee
Q 029933          104 TESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKL-KGVAFIKDPDDYWIEIFD  174 (185)
Q Consensus       104 ~~~~~~~~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~~~~~~-~~~~~~~DPdG~~iEl~~  174 (185)
                      ... .    .  .........+|++.|+|++++++++.++|+.+..++....+ .+.++|+||+||.|+|.|
T Consensus        71 ~~~-~----~--~~~~~~~~~~l~~~v~d~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~v~Dp~G~~W~i~e  135 (135)
T d1xy7a_          71 LPG-F----S--TAKSEGSGVTFLLGTKDAEAAVAKAVDAGAVKVEVTEAEVELGFKGKVTDPFGVTWIFAE  135 (135)
T ss_dssp             STT-C----C--CCCTTSCCCEEEEECSCHHHHHHHHHHTTCEECCCCHHHHHTTEEEEEECTTSCEEEEEC
T ss_pred             ccc-c----c--cCCCCCcceEEEEeecCcceeEEEeecccceEecCcccccccCEEEEEECCCCCEEEEeC
Confidence            100 0    0  00111233599999999999999999999999998866443 357899999999999975

>d1cjxa1 d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.43  E-value=9.8e-14  Score=98.71  Aligned_cols=121  Identities=15%  Similarity=0.066  Sum_probs=83.3

Q ss_pred             eEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCCCCCC
Q 029933           28 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESD  107 (185)
Q Consensus        28 ~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~  107 (185)
                      .|+||.+.|+|++++.+||++ |||+.+.+....  .  ...++.                     ..+.++.+..... 
T Consensus         9 Gidhv~fav~d~~~~~~~~~~-lGF~~~~~~~~~--~--~~l~~~---------------------G~i~ll~~~~~~s-   61 (150)
T d1cjxa1           9 GFEFIEFASPTPGTLEPIFEI-MGFTKVATHRSK--N--VHLYRQ---------------------GEINLILNNEPNS-   61 (150)
T ss_dssp             EEEEEEEECSSTTSSHHHHHH-TTCEEEEEESSS--S--EEEEEE---------------------TTEEEEEECCSSS-
T ss_pred             CEEEEEEecCCHHHHHHHHHH-hCCEEEecccce--E--EEEEec---------------------CcEEEEecCCCCC-
Confidence            799999999999999999976 999988764321  1  222221                     2244433322211 


Q ss_pred             CCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCEEeecCCCCccceEEEEECCCCcEEEEeecCcc
Q 029933          108 PDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTI  178 (185)
Q Consensus       108 ~~~~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~~~  178 (185)
                       ....+.  .....++.||+|.|+|+++++++++++|+++..++..........+++++|.++.++++...
T Consensus        62 -~~~~~~--~~hg~gv~hiaf~V~D~~~a~~~a~~~Ga~~i~~~~~~g~~~~~~i~g~gg~~i~Fv~~~~~  129 (150)
T d1cjxa1          62 -IASYFA--AEHGPSVCGMAFRVKDSQKAYNRALELGAQPIHIDTGPMELNLPAIKGIGGAPLYLIDRFGE  129 (150)
T ss_dssp             -HHHHHH--HHHSSEEEEEEEEESCHHHHHHHHHHTTCCBCCCCCCTTCBCCCEEECGGGCEEEEECCCSS
T ss_pred             -HhHhHH--hhCCCceEEEEEEeCCHHHHHHHHHHCCCEEcccCCCCCceeeeEEEcCCCCEEEEECcCCC
Confidence             000010  01123889999999999999999999999988776443333467889999999999997653

>d1sp8a2 d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=99.27  E-value=4.7e-12  Score=95.39  Aligned_cols=106  Identities=11%  Similarity=0.229  Sum_probs=65.3

Q ss_pred             eEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecC-----CCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecC
Q 029933           28 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFP-----EMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNW  102 (185)
Q Consensus        28 ~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~  102 (185)
                      +|+||++.|+|++++++||+++|||+...+....     ........+..+                 .+...+.+....
T Consensus         9 ~IDHI~i~V~dld~a~~fY~~vLGf~~~~~~~~~~i~~~~~~l~s~v~~~~-----------------~g~v~~~l~E~~   71 (224)
T d1sp8a2           9 RFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANN-----------------SENVLLPLNEPV   71 (224)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEC--------CEEEEEEECS-----------------SSCCEEEEEEEC
T ss_pred             eeeeeEEeccCHHHHHHHHHHHhCCEEEEEeccccccccceeEEEEEEEcC-----------------CCccceeeeeec
Confidence            8999999999999999999999999987654321     122222222222                 224556665543


Q ss_pred             CCCC-CCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcC----CEEeecC
Q 029933          103 GTES-DPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLG----VEFAKKP  151 (185)
Q Consensus       103 ~~~~-~~~~~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G----~~~~~~~  151 (185)
                      .+.. ......+- ......|++||||.|+||.+++++|+++|    +++...|
T Consensus        72 ~~~~~~s~i~~FL-~~~~g~GiqHIAf~vdDI~~av~~L~arGv~~G~~fl~~p  124 (224)
T d1sp8a2          72 HGTKRRSQIQTFL-DHHGGPGVQHMALASDDVLRTLREMQARSAMGGFEFMAPP  124 (224)
T ss_dssp             CCSSSCCHHHHHH-HHHTSSEEEEEEEEETTHHHHHHHHHTSGGGTSCCBCCCC
T ss_pred             CCCCCccHHHHHH-HhccCCCceeEEEEeCCHHHHHHHHHhccccccceecccc
Confidence            2211 00000000 00012389999999999999999999875    4455444

>d1cjxa2 d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.27  E-value=5.8e-12  Score=93.59  Aligned_cols=105  Identities=13%  Similarity=0.272  Sum_probs=67.5

Q ss_pred             eEEEEEEEeC--ChHHHHHHHHHhcCCEEeeeeecCCC--ceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCC
Q 029933           28 FMQQTMFRIK--DPKVSLDFYSRVLGMSLLKRLDFPEM--KFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWG  103 (185)
Q Consensus        28 ~i~h~~l~v~--D~e~s~~FY~~~LG~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~  103 (185)
                      +|+|+++.|+  |+++++.||+++|||+.....+..+.  ......+..+.                 +...+.+.....
T Consensus         5 ~IDHIa~~V~~~~l~~a~~FY~~vlGf~~~~~~di~~~~~~l~s~~~~~~~-----------------~~~~~~l~~~~~   67 (203)
T d1cjxa2           5 VIDHLTHNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAPD-----------------GMIRIPLNEESS   67 (203)
T ss_dssp             EEEEECEECCTTHHHHHHHHHHHHHCCEEEEEEEEECSSCEEEEEEEECTT-----------------SSCEEEEEEECT
T ss_pred             eeCeeEeccChhhHHHHHHHHHHHhCCEEeEEEecCCCcceEEEEEeeccc-----------------cccceecccCCC
Confidence            7999999997  99999999999999998876543322  22222222221                 133444433322


Q ss_pred             CCCCCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCEEeecC
Q 029933          104 TESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP  151 (185)
Q Consensus       104 ~~~~~~~~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~  151 (185)
                      ... .....+.. .....|++||||.|+||.++.++|+++|++++..|
T Consensus        68 ~~~-sqi~~fl~-~~~g~GiqHIAf~vdDI~aav~~L~~~Gv~fL~~p  113 (203)
T d1cjxa2          68 KGA-GQIEEFLM-QFNGEGIQHVAFLTDDLVKTWDALKKIGMRFMTAP  113 (203)
T ss_dssp             TCC-SHHHHHHH-HHTSSBCCEEEEEESCHHHHHHHHHHTTCCBCCCC
T ss_pred             CCc-cHHHHHHH-hcCCCCCceEEEEeCCHHHHHHHHHhcCCccccCc
Confidence            111 00000100 01123889999999999999999999999998765

>d1t47a2 d.32.1.3 (A:179-377) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=99.25  E-value=3e-11  Score=89.30  Aligned_cols=106  Identities=13%  Similarity=0.215  Sum_probs=66.6

Q ss_pred             eEEEEEEEeC--ChHHHHHHHHHhcCCEEeeeeec-----CCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEee
Q 029933           28 FMQQTMFRIK--DPKVSLDFYSRVLGMSLLKRLDF-----PEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTH  100 (185)
Q Consensus        28 ~i~h~~l~v~--D~e~s~~FY~~~LG~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~  100 (185)
                      .|+|+++.|+  ++++++.||+++|||+.......     +...+...-+..++                 +...+.+..
T Consensus         6 ~IDHia~avp~~~l~~av~fY~~vfGf~~~~~~~~~di~~~~~~l~s~~~~s~~-----------------~~v~l~lne   68 (199)
T d1t47a2           6 AIDHCVGNVELGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADGT-----------------LKVKFPINE   68 (199)
T ss_dssp             EEEEEEEECCTTCHHHHHHHHHHHHCCEECSCCBCHHHHTTTTSEEEEEEECTT-----------------SCSEEEEEE
T ss_pred             eeCceEeccChhhHHHHHHHHHHHhCCeEeeEecccccccceeEEEEeeccccc-----------------cccceeecc
Confidence            6999999998  99999999999999988765321     11222222222211                 133444433


Q ss_pred             cCCCCCCCCCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCEEeecC
Q 029933          101 NWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP  151 (185)
Q Consensus       101 ~~~~~~~~~~~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~  151 (185)
                      ............+- ...+..|++||||.|+||.++.+.|+++|++++..|
T Consensus        69 ~~~~~~~s~i~~FL-~~~~g~GiQHIAl~tdDI~~av~~L~~~G~~fL~~p  118 (199)
T d1t47a2          69 PALAKKKSQIDEYL-EFYGGAGVQHIALNTGDIVETVRTMRAAGVQFLDTP  118 (199)
T ss_dssp             ECCSSSCCHHHHHH-HHHTSCEEEEEEEECSCHHHHHHHHHHTTCCBCCCC
T ss_pred             cCccccccchhhhh-hhcCCCcceEEEEEcCCHHHHHHHHHHcCCCCCCCC
Confidence            21111100000000 001223899999999999999999999999999877

>d1sqia2 d.32.1.3 (A:157-366) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.19  E-value=5.1e-11  Score=88.72  Aligned_cols=103  Identities=14%  Similarity=0.286  Sum_probs=64.8

Q ss_pred             eEEEEEEEeCC--hHHHHHHHHHhcCCEEeeeeecCC-----CceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEee
Q 029933           28 FMQQTMFRIKD--PKVSLDFYSRVLGMSLLKRLDFPE-----MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTH  100 (185)
Q Consensus        28 ~i~h~~l~v~D--~e~s~~FY~~~LG~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~  100 (185)
                      +|+|+++.|.+  +++++.||+++|||+........+     .......+..+                 .+...+.+..
T Consensus        24 ~IDHv~~~Vp~~~ld~av~fY~~vfGf~~~~~~~~~~i~~~~~~l~s~~l~s~-----------------~~~i~~~lne   86 (210)
T d1sqia2          24 IIDHIVGNQPDQEMESASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANY-----------------EESIKMPINE   86 (210)
T ss_dssp             EEEEEEEECCTTCHHHHHHHHHHHHCCEEECCC-----------CEEEEEECT-----------------TSCCEEEEEE
T ss_pred             eeCceEeccCchhHHHHHHHHHHHhCCEEEEEecccccCCceeEEEEEEEEec-----------------Cccccccccc
Confidence            69999999987  999999999999998776532111     11112222221                 1234555543


Q ss_pred             cCCCCCCC---CCCCCCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCCEEeecC
Q 029933          101 NWGTESDP---DFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKP  151 (185)
Q Consensus       101 ~~~~~~~~---~~~~~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~  151 (185)
                      ........   .+.....|    .|++||||.|+||.++.++|+++|++++..|
T Consensus        87 ~~~~~~~sqi~~fl~~~~G----~GiQHIAf~t~DI~~av~~L~~~Gv~fL~~P  136 (210)
T d1sqia2          87 PAPGRKKSQIQEYVDYNGG----AGVQHIALRTEDIITTIRHLRERGMEFLAVP  136 (210)
T ss_dssp             CC-----CHHHHHHHHHTS----SEEEEEEEEESCHHHHHHHHHHHTCCBCCCC
T ss_pred             cCCCCcccHHHHHHhhcCC----CCeeEEEEEcCCHHHHHHHHHHcCCCCCCCC
Confidence            32111100   00001122    3899999999999999999999999999766

>d1u6la_ d.32.1.7 (A:) Hypothetical protein PA1353 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1353
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.15  E-value=2.5e-09  Score=73.94  Aligned_cols=124  Identities=10%  Similarity=-0.089  Sum_probs=70.7

Q ss_pred             EEEeC-ChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceee-ecCCCcEEEEeecCCCCCCCCC
Q 029933           33 MFRIK-DPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVW-TFGKPATIELTHNWGTESDPDF  110 (185)
Q Consensus        33 ~l~v~-D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~l~~~~~~~~~~~~  110 (185)
                      -|... |.+++++||+++||+++.......+...........        .....+- .......+.+.......     
T Consensus         7 yl~f~g~a~eAl~FY~~~fG~e~~~~~~~~~~~~~~~~~~~~--------~~~i~ha~l~i~g~~~~~~d~~~~~-----   73 (137)
T d1u6la_           7 YLIFNGNCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPADW--------KDKIMHARLVVGSFALMASDNHPAY-----   73 (137)
T ss_dssp             EEEESSCHHHHHHHHHHHHCSEEEEEEESTTTTC----CCSS--------CCCEEEEEEEETTEEEEEEECCTTS-----
T ss_pred             EEEECCCHHHHHHHHHHHCCCEEEEEEEcccCCccccCCCCC--------CCeEEEEEEEEcCeEEEecccCCcc-----
Confidence            34455 999999999999999998765443322111110000        0000000 00011222222211110     


Q ss_pred             CCCCCCCCCCCCceEEEEEeCCHH--HHHHHHHhcCCEEeecCCCCccc-eEEEEECCCCcEEEEeec
Q 029933          111 KGYHNGNSEPRGFGHIGITVDDVY--KACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIFDL  175 (185)
Q Consensus       111 ~~~~~~~~~~~g~~hi~~~v~dv~--~~~~~l~~~G~~~~~~~~~~~~~-~~~~~~DPdG~~iEl~~~  175 (185)
                       +..     .....++++.+++.+  +.+.+..++|+++..++.+..++ +.++|+||+|+.|+|-..
T Consensus        74 -~~~-----~~~~~~~~l~~~~~d~~~~~~~~l~~G~~v~~p~~~~~wG~~~g~v~Dp~G~~W~i~~~  135 (137)
T d1u6la_          74 -PYE-----GIKGCSISLNVDSKAEAERLFNALAEGGSVQMPLGPTFWAASFGMFTDRFGVAWMVNCE  135 (137)
T ss_dssp             -CCC-----CCCSEEEEEECSSHHHHHHHHHHHHTTSEEEEEEEEETTEEEEEEEECTTSCEEEEEES
T ss_pred             -ccc-----CCCcEEEEEEcCCHHHHHHHHhhcccCceeecCccccCCCcEEEEEECCCCCEEEEEec
Confidence             011     113368889988655  44677778999999988765554 578899999999999654

>d1sqda2 d.32.1.3 (A:181-410) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.92  E-value=1.1e-09  Score=82.37  Aligned_cols=97  Identities=7%  Similarity=0.200  Sum_probs=60.6

Q ss_pred             eEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCC-----CceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecC
Q 029933           28 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPE-----MKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNW  102 (185)
Q Consensus        28 ~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~  102 (185)
                      +|+||++.|.|++++.+||+++||+.........+     ..+....+..                 ..+...+.+....
T Consensus        22 ~IDHI~iaVpdld~a~~~y~~~lG~~~~~~~~~~di~~~~~~l~s~v~~s-----------------~~g~v~~~l~E~~   84 (230)
T d1sqda2          22 RLDHAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLAS-----------------NDEMVLLPINEPV   84 (230)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEEEEEEC--------CCEEEEEEEC-----------------TTSCSEEEEEEEC
T ss_pred             ccCcceecccCHHHHHHHHHHHcCCeeeEEecccccccceeeEeeccccC-----------------CCcccceeEEeec
Confidence            79999999999999999999999998887643211     1111111121                 1224556665432


Q ss_pred             CCCC-CCCCCC---CCCCCCCCCCceEEEEEeCCHHHHHHHHHhcCC
Q 029933          103 GTES-DPDFKG---YHNGNSEPRGFGHIGITVDDVYKACERFERLGV  145 (185)
Q Consensus       103 ~~~~-~~~~~~---~~~~~~~~~g~~hi~~~v~dv~~~~~~l~~~G~  145 (185)
                      .... ......   ...|    .|++||||.|+||.++.++|+++|+
T Consensus        85 ~~~~~~sqi~~FL~~~~G----~GiQHIAf~tdDI~aav~~LrarG~  127 (230)
T d1sqda2          85 HGTKRKSQIQTYLEHNEG----AGLQHLALMSEDIFRTLREMRKRSS  127 (230)
T ss_dssp             CC---CCHHHHHHHHHTS----CEEEEEEEEESCHHHHHHHHHHHGG
T ss_pred             CCCCCcchHHHHHhhccC----CceeEEEEEeCCHHHHHHHHHHhhc
Confidence            2211 000000   1122    3899999999999999999998743

>d1u7ia_ d.32.1.7 (A:) Hypothetical protein PA1358 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1358
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.75  E-value=5.5e-07  Score=61.71  Aligned_cols=113  Identities=8%  Similarity=0.021  Sum_probs=66.1

Q ss_pred             EEEEEeCChHHHHHHHHHhcCCEEeeeee-------cCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCC
Q 029933           31 QTMFRIKDPKVSLDFYSRVLGMSLLKRLD-------FPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWG  103 (185)
Q Consensus        31 h~~l~v~D~e~s~~FY~~~LG~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~  103 (185)
                      ++.+.-.|.+++++||+++||...+.+..       ...+......+..+                   ...+.+.....
T Consensus         9 yL~f~g~~a~eAi~FY~~~Fg~~~v~~~~~~~~~~~~~~g~v~ha~l~i~-------------------~~~i~~~d~~~   69 (134)
T d1u7ia_           9 FLMFQGVQAEAAMNFYLSLFDDAEILQIQRYGAEGPGPEGSVLKALFRLG-------------------DQSVHCIDSHV   69 (134)
T ss_dssp             EEEEESSCHHHHHHHHHHHCSSEEEEEEEECCTTCSSCTTSEEEEEEEET-------------------TEEEEEEEESS
T ss_pred             EEEECCcCHHHHHHHHHHhCCCeEEEEEEEcCCCCCCCCCCEEEEEEEEC-------------------CEEEEEecCCC
Confidence            34444458999999999999987654421       11222222333322                   23444433211


Q ss_pred             CCCCCCCCCCCCCCCCCCCceEEEEEeCCHHHH--HHHHHhcCCEEeecCCCCcc-ceEEEEECCCCcEEEEe
Q 029933          104 TESDPDFKGYHNGNSEPRGFGHIGITVDDVYKA--CERFERLGVEFAKKPDGGKL-KGVAFIKDPDDYWIEIF  173 (185)
Q Consensus       104 ~~~~~~~~~~~~~~~~~~g~~hi~~~v~dv~~~--~~~l~~~G~~~~~~~~~~~~-~~~~~~~DPdG~~iEl~  173 (185)
                      ...      ...     ....++++.+++.++.  +.+..+.|.++..++.+..+ .+...++||.|+.|.|.
T Consensus        70 ~~~------~~~-----~~~~s~~l~~~~~d~~~~~~~~l~~gg~v~~p~~~~~~g~~~g~v~D~fGv~W~i~  131 (134)
T d1u7ia_          70 RHA------FDF-----TPAFSFFVDCESNAQIERLAEALSDGGKALMPLGDYGFSQRFAWLADRFGVSWQLN  131 (134)
T ss_dssp             CCS------CCC-----CTTEEEEEECCCHHHHHHHHHHHHTTSEEEEEEECCSSSSEEEEEECTTSCEEEEE
T ss_pred             CCC------CCC-----CCceEEEEEeccHHHHHHHHHHHhcCCEEecCcccccccceEEEEECCCCCEEEEE
Confidence            110      111     1335788888875443  44445778888887766444 35678999999999985

>d1tsja_ d.32.1.7 (A:) Hypothetical protein MW1090 {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein MW1090
species: Staphylococcus aureus [TaxId: 1280]

Probab=98.17  E-value=3.8e-05  Score=51.89  Aligned_cols=51  Identities=10%  Similarity=-0.041  Sum_probs=35.8

Q ss_pred             eEEEEEeCCHHH---HHHHHHhcCCEEeecCCCCccc-eEEEEECCCCcEEEEeec
Q 029933          124 GHIGITVDDVYK---ACERFERLGVEFAKKPDGGKLK-GVAFIKDPDDYWIEIFDL  175 (185)
Q Consensus       124 ~hi~~~v~dv~~---~~~~l~~~G~~~~~~~~~~~~~-~~~~~~DPdG~~iEl~~~  175 (185)
                      .++++.+++.++   ++++| +.|.++..++.+..++ +...++||.|+.|.|..+
T Consensus        74 ~s~~v~~~~~~e~~~~~~~L-~~gg~v~~p~~~~~~g~~~g~v~D~fGv~W~i~~p  128 (129)
T d1tsja_          74 ISLFVTVKDTIEMERLFNGL-KDEGAILMPKTNMPPYREFAWVQDKFGVSFQLALP  128 (129)
T ss_dssp             CCEEEECSSHHHHHHHHHHH-HTTCEEEEEEEEETTEEEEEEEECTTSCEEEEEEC
T ss_pred             EEEEeccCCHHHHHHHHHHh-ccCCEEecccccccccceEEEEECCCCCEEEEeCC
Confidence            357788887665   44555 4566888777554443 456799999999998653

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

Probab=96.33  E-value=0.014  Score=38.61  Aligned_cols=59  Identities=17%  Similarity=0.218  Sum_probs=42.0

Q ss_pred             CCceeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeec
Q 029933           24 TNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHN  101 (185)
Q Consensus        24 ~~~~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~  101 (185)
                      .....++|+++.|.|+++..+.+++ .|.++..........+...|+..++                  +..+||++.
T Consensus        89 ~~~~g~~hi~~~v~d~~~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~~DPd------------------G~~iEl~e~  147 (149)
T d1ss4a_          89 VNALGYLRVMFTVEDIDEMVSRLTK-HGAELVGEVVQYENSYRLCYIRGVE------------------GILIGLAEE  147 (149)
T ss_dssp             SSSBEEEEEEEEESCHHHHHHHHHH-TTCEESSCCEEETTTEEEEEEECGG------------------GCEEEEEEE
T ss_pred             CCCcceeEEEEeechhHHHHHHHHH-CCCeEccCCeECCCCeEEEEEECCC------------------CCEEEEEEc
Confidence            3345799999999999999999977 8998865432223344556666554                  568888754

>d1u69a_ d.32.1.7 (A:) Hypothetical protein PA2721 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA2721
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.33  E-value=0.23  Score=33.68  Aligned_cols=43  Identities=12%  Similarity=-0.001  Sum_probs=30.7

Q ss_pred             eEEEEEeCC---HHHHHHHHHhcCCEEeecCCCCccceEEEEECCCCcEEEEeec
Q 029933          124 GHIGITVDD---VYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDL  175 (185)
Q Consensus       124 ~hi~~~v~d---v~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~  175 (185)
                      .+|++.+++   ++.++++|.+.| ++..+     ++   .++|..|..|.|+.+
T Consensus        74 ~sl~l~~d~~eE~d~~f~~LsegG-~~~~~-----~G---~v~DkFGV~Wqi~~~  119 (156)
T d1u69a_          74 FSFQVATDDQAETDRLWNAIVDNG-GEESA-----CG---WCRDKWGISWQITPR  119 (156)
T ss_dssp             EEEEEEESSHHHHHHHHHHHHHTT-CEECS-----TT---EEECTTSCEEEEEEH
T ss_pred             eEEEEecCCHHHHHHHHHHHhccC-CCCCC-----Ce---EEECCCCCEEEeChH
Confidence            588999997   555677776655 33322     22   589999999999965

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

Probab=95.27  E-value=0.053  Score=33.87  Aligned_cols=53  Identities=26%  Similarity=0.494  Sum_probs=42.0

Q ss_pred             CceEEEEEeCCHHHHHHHHHh-cCCEEeecCCCCccceEEEEECCCCcEEEEeecCcc
Q 029933          122 GFGHIGITVDDVYKACERFER-LGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFDLKTI  178 (185)
Q Consensus       122 g~~hi~~~v~dv~~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~~~  178 (185)
                      ++.||.+.|+|+++..+.+.+ .|.++......    ...|+.++++..+.+.+....
T Consensus         3 ~i~Hi~l~v~Dl~~a~~FY~~~lG~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~   56 (113)
T d1xqaa_           3 GIKHLNLTVADVVAAREFLEKYFGLTCSGTRGN----AFAVMRDNDGFILTLMKGKEV   56 (113)
T ss_dssp             CCCEEEEEESCHHHHHHHHHHHHCCEEEEEETT----TEEEEECTTCCEEEEEECSSC
T ss_pred             cccEEEEEeCCHHHHHHHHHHhhCCEEEEeecC----cceeeeecceeeeeeeeeecc
Confidence            678999999999999999887 79988765421    246778888999999876553

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=92.91  E-value=0.27  Score=33.03  Aligned_cols=30  Identities=7%  Similarity=0.031  Sum_probs=26.7

Q ss_pred             eEEEEEEEeCChHHHHHHHHHhcCCEEeeee
Q 029933           28 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRL   58 (185)
Q Consensus        28 ~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~   58 (185)
                      .+.|++|.|+|++++.+...+ .|.+.+...
T Consensus       104 G~~Hiaf~VdDi~aa~~~l~~-~G~~~~~~P  133 (167)
T d1sqda1         104 GVRAVAIEVEDAESAFSISVA-NGAIPSSPP  133 (167)
T ss_dssp             EEEEEEEEESCHHHHHHHHHH-TTCCEEEEE
T ss_pred             CceEEEEEeCCHHHHHHHHHH-CCCEEecCC
Confidence            799999999999999999987 799888653

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=92.67  E-value=0.14  Score=34.35  Aligned_cols=57  Identities=9%  Similarity=0.245  Sum_probs=39.9

Q ss_pred             CCceEEEEEeCCHHHHHHHHHh-cCCEEeecCCC--CccceEEEEECCCCcEEEEeecCc
Q 029933          121 RGFGHIGITVDDVYKACERFER-LGVEFAKKPDG--GKLKGVAFIKDPDDYWIEIFDLKT  177 (185)
Q Consensus       121 ~g~~hi~~~v~dv~~~~~~l~~-~G~~~~~~~~~--~~~~~~~~~~DPdG~~iEl~~~~~  177 (185)
                      .+++||+|.|.|++++.+.++. .|.+.......  .......++....+..++|.+...
T Consensus         6 ~~idHv~i~V~D~~~a~~fY~~~lGf~~v~~~~~~~~~~~~~~~~l~~~~~~i~l~~~~~   65 (163)
T d1t47a1           6 KGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSARFVLTSVIK   65 (163)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEEESS
T ss_pred             ceEeEEEEEeCCHHHHHHHHHHHhCCeEEeeecccccceeEEEEEEecCCEEEEEeccCC
Confidence            3789999999999999999985 79988754321  122233444445667788887544

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.36  E-value=0.16  Score=33.51  Aligned_cols=54  Identities=13%  Similarity=0.125  Sum_probs=35.6

Q ss_pred             CceEEEEEeCCHHHHHHHHH-hcCCEEeecCCC--CccceEEEEECCCCcEEEEeec
Q 029933          122 GFGHIGITVDDVYKACERFE-RLGVEFAKKPDG--GKLKGVAFIKDPDDYWIEIFDL  175 (185)
Q Consensus       122 g~~hi~~~v~dv~~~~~~l~-~~G~~~~~~~~~--~~~~~~~~~~DPdG~~iEl~~~  175 (185)
                      +++||+|.|.|++++.+.+. ..|.+.......  +......+...-++..+++.+.
T Consensus        11 ~~dHi~i~V~Dl~~a~~fY~~~lGf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~   67 (149)
T d1sqia1          11 HFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQGKIVFVLCSA   67 (149)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEEE
T ss_pred             eEeEEEEEcCCHHHHHHHHhhccceEEEEEecccCCceEEEEEEecCCcEEEEEEec
Confidence            78999999999999999996 579988754321  2222223333345556666653

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=92.01  E-value=0.31  Score=33.04  Aligned_cols=31  Identities=10%  Similarity=0.045  Sum_probs=27.0

Q ss_pred             eeEEEEEEEeCChHHHHHHHHHhcCCEEeeee
Q 029933           27 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRL   58 (185)
Q Consensus        27 ~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~   58 (185)
                      ..+.|++|.|+|++++.+-.++ .|.++....
T Consensus        98 ~Gi~Hiaf~VdDi~aa~~~l~~-~Ga~~~~~P  128 (172)
T d1sp8a1          98 LAVRAVALRVADAEDAFRASVA-AGARPAFGP  128 (172)
T ss_dssp             SEEEEEEEEESCHHHHHHHHHT-TTCCEEEEE
T ss_pred             CceEEEEEeeCcHHHHHHHHHH-CcCEeccCC
Confidence            4789999999999999999977 899887654

>d1k4na_ d.32.1.5 (A:) Hypothetical protein YecM (EC4020) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YecM (EC4020)
domain: Hypothetical protein YecM (EC4020)
species: Escherichia coli [TaxId: 562]

Probab=90.47  E-value=1.7  Score=30.04  Aligned_cols=33  Identities=6%  Similarity=-0.046  Sum_probs=28.0

Q ss_pred             CceeEEEEEEEeCChHHHHHHHHHhcCCEEeee
Q 029933           25 NGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKR   57 (185)
Q Consensus        25 ~~~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~   57 (185)
                      ..+.++|++++|.+.+.+.+|-+.++.+-....
T Consensus        40 ~~~~~DHialR~n~~~~A~~w~~~l~~~G~llS   72 (190)
T d1k4na_          40 TPLTADHISLRCHQNATAERWRRGFEQCGELLS   72 (190)
T ss_dssp             TTCEEEEEEEECSCHHHHHHHHHHHTTTEEEEE
T ss_pred             hhccCcEEEEeeCCHHHHHHHHHHHHHhchhhh
Confidence            457899999999999999999999998854443

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=90.28  E-value=0.77  Score=29.50  Aligned_cols=56  Identities=5%  Similarity=0.004  Sum_probs=34.6

Q ss_pred             eEEEEEEEeCChHHHHHHHHHh--cCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeecCC
Q 029933           28 FMQQTMFRIKDPKVSLDFYSRV--LGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWG  103 (185)
Q Consensus        28 ~i~h~~l~v~D~e~s~~FY~~~--LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~  103 (185)
                      .++|+++.|.|.+.-.+|.+.+  .|+.+.......  .....|+..++                  +..+||+...+
T Consensus        77 ~~~Hiaf~v~~~~~l~~~~~~l~~~gv~~~~~~~~~--~~~~~yf~DPd------------------G~~iEl~~~~~  134 (144)
T d1zswa1          77 AITRIGLLVPSEDSLHYWKERFEKFDVKHSEMTTYA--NRPALQFEDAE------------------GLRLVLLVSNG  134 (144)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHHHHTTCEECCSEEET--TEEEEEEECTT------------------CCEEEEEECTT
T ss_pred             ceeEEEEecCCchhHHHHhhhhhccceeeeCccccC--CeEEEEEECCC------------------CCEEEEEEeCC
Confidence            6899999999966555554443  577654322221  23445666554                  57899986544

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

Probab=89.03  E-value=0.59  Score=29.80  Aligned_cols=55  Identities=7%  Similarity=0.118  Sum_probs=36.5

Q ss_pred             CceEEEEEeCCHHHHHHHHHh-cCCEEeecCCCCccc-eEEEEE-----CCCCcEEEEeecC
Q 029933          122 GFGHIGITVDDVYKACERFER-LGVEFAKKPDGGKLK-GVAFIK-----DPDDYWIEIFDLK  176 (185)
Q Consensus       122 g~~hi~~~v~dv~~~~~~l~~-~G~~~~~~~~~~~~~-~~~~~~-----DPdG~~iEl~~~~  176 (185)
                      +++||++.|+|++++.+.+++ .|.+..........+ ...+..     ...+..+|+++..
T Consensus         7 ~i~Hi~i~v~Dl~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~~   68 (145)
T d1jc4a_           7 CIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPL   68 (145)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEES
T ss_pred             EEeEEEEEeCCHHHHHHHHHhhccCceeeeeeecccceEEEeeeceeccccccchhhhhhhh
Confidence            789999999999999999976 688765433221111 222222     2456788888754

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

Probab=88.15  E-value=0.69  Score=29.56  Aligned_cols=30  Identities=27%  Similarity=0.329  Sum_probs=26.4

Q ss_pred             CceEEEEEeCCHHHHHHHHHh-cCCEEeecC
Q 029933          122 GFGHIGITVDDVYKACERFER-LGVEFAKKP  151 (185)
Q Consensus       122 g~~hi~~~v~dv~~~~~~l~~-~G~~~~~~~  151 (185)
                      ++.||+|.|+|+++..+...+ .|+++....
T Consensus         4 ~l~hv~i~V~Dl~~s~~FY~~vLG~~~~~~~   34 (131)
T d1lgta1           4 SLGYMGFAVSDVAAWRSFLTQKLGLMEAGTT   34 (131)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred             cccEEEEEeCCHHHHHHHHHHhhCCceeecC
Confidence            678999999999999999998 599887654

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.56  E-value=1.4  Score=29.31  Aligned_cols=59  Identities=17%  Similarity=0.166  Sum_probs=41.9

Q ss_pred             CCCceeEEEEEEEeCChHHHHHHHHHhcCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeec
Q 029933           23 ATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHN  101 (185)
Q Consensus        23 ~~~~~~i~h~~l~v~D~e~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~  101 (185)
                      ......+.|+++.+.|+++..+.+++ .|.++..... .......+|+..++                  +..|||++.
T Consensus       111 ~~~~~g~~h~~~~~~d~~~~~~~l~~-~Gv~~~~~p~-~g~~~~~~f~~DPd------------------G~~IElvq~  169 (176)
T d1qipa_         111 NSDPRGFGHIGIAVPDVYSACKRFEE-LGVKFVKKPD-DGKMKGLAFIQDPD------------------GYWIEILNP  169 (176)
T ss_dssp             SSSSCBEEEEEEECSCHHHHHHHHHH-TTCEEEECTT-SSSSTTCEEEECTT------------------CCEEEEECT
T ss_pred             CCCccceeEEEeeHHHHHHHHHHHHH-CCCEEeeCCc-cCCceEEEEEECCC------------------CCEEEEEeC
Confidence            34455899999999999999999986 7998886532 11122345666554                  578999764

>d1zswa2 d.32.1.10 (A:145-314) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=87.48  E-value=0.71  Score=31.10  Aligned_cols=54  Identities=13%  Similarity=0.210  Sum_probs=36.7

Q ss_pred             eEEEEEEEeCChHHHHHHHHHh--cCCEEeeeeecCCCceEEEeeccCCCCCCCCCCccceeeecCCCcEEEEeec
Q 029933           28 FMQQTMFRIKDPKVSLDFYSRV--LGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHN  101 (185)
Q Consensus        28 ~i~h~~l~v~D~e~s~~FY~~~--LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~  101 (185)
                      .++|+++.|.|.+...+++..+  .|+.+.....  ...+..+|+..++                  +..+|+...
T Consensus        75 ~l~HiAf~V~~~~~l~~~~~~l~~~G~~~~~~~~--~~~~~s~Yf~DPd------------------G~~iEl~t~  130 (170)
T d1zswa2          75 SIHHLAIRVKNDAELAYWEEQVKQRGFHSSGIID--RFYFKSLYFRESN------------------GILFEIATD  130 (170)
T ss_dssp             CEEEEEEEESSHHHHHHHHHHHHHTTCCCCCCEE--CSSEEEEEEECTT------------------CCEEEEEEE
T ss_pred             ccceEEEEeCChHHHHHHHHHHHhcCCCcccccc--CCCEEEEEEECCC------------------CcEEEEEEC
Confidence            5899999999988887887765  4666543222  2334556677655                  578998753

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=87.10  E-value=0.91  Score=30.72  Aligned_cols=54  Identities=13%  Similarity=0.067  Sum_probs=35.1

Q ss_pred             CceEEEEEeCCHHHHHHHHHhcCCEEeecCCCCccc-eEEE-EECCCCcEEEEeec
Q 029933          122 GFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLK-GVAF-IKDPDDYWIEIFDL  175 (185)
Q Consensus       122 g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~~~~~~~-~~~~-~~DPdG~~iEl~~~  175 (185)
                      .+.||+|.|.|+++..+..+..|.++.......... ..++ -.+...+.+.+...
T Consensus         5 rl~Hv~l~v~Dle~s~~FYe~LGf~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~   60 (176)
T d1f1ua2           5 RLDHFNQVTPDVPRGRAYLEDLGFRVSEDIKDSDGVTYAAWMHRKQTVHDTALTGG   60 (176)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCEEEEEEECTTCCEEEEEEESSSSSCSEEEEES
T ss_pred             EeeeEEEEcCCHHHHHHHHHHCCCEEEEEEecCCcceeeeeeccCccccceecccc
Confidence            568999999999999988888999987543222111 1222 23444555655543

>d1klla_ d.32.1.2 (A:) Mitomycin resistance protein D, MRD {Streptomyces lavendulae [TaxId: 1914]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Mitomycin resistance protein D, MRD
species: Streptomyces lavendulae [TaxId: 1914]

Probab=85.97  E-value=0.6  Score=29.46  Aligned_cols=50  Identities=16%  Similarity=0.209  Sum_probs=33.9

Q ss_pred             CceEEEEEeCCHHHHHHHHHhcCCEEeecCCCCccceEEEEECCCCcEEEEee
Q 029933          122 GFGHIGITVDDVYKACERFERLGVEFAKKPDGGKLKGVAFIKDPDDYWIEIFD  174 (185)
Q Consensus       122 g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~  174 (185)
                      .+.|+++.|.|+++..+..++.|..+........   .+.+.-.++..+.+..
T Consensus         2 ri~hv~l~V~D~~~s~~FY~~Lg~~~~~~~~~~~---~~~~~~~~~~~~~~~~   51 (128)
T d1klla_           2 RISLFAVVVEDMAKSMEFYRKMGVEIPAEADSAP---HTEAVLDGGIRLAWDT   51 (128)
T ss_dssp             CCCEEEEEESCHHHHHHHHHHTTCCCCTTGGGCS---EEEEECGGGCEEEEEE
T ss_pred             eEeEEEEEcCCHHHHHHHHHHhCCcccccccccc---ceeeeccceeeeeecc
Confidence            3579999999999999999888887654432221   2444545566666544

>d1kw3b2 d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=85.12  E-value=0.45  Score=31.68  Aligned_cols=31  Identities=29%  Similarity=0.412  Sum_probs=26.7

Q ss_pred             CCCceEEEEEeCCHHHHHHHHHh-cCCEEeec
Q 029933          120 PRGFGHIGITVDDVYKACERFER-LGVEFAKK  150 (185)
Q Consensus       120 ~~g~~hi~~~v~dv~~~~~~l~~-~G~~~~~~  150 (185)
                      +.|+.|+++.|.|+++..+.+.+ .|.++...
T Consensus         8 ~~GlgHv~l~v~D~e~t~~FY~~vLG~~~~~~   39 (156)
T d1kw3b2           8 DQGIGHFVRCVPDTAKAMAFYTEVLGFVLSDI   39 (156)
T ss_dssp             GGCSCEEEEECSCHHHHHHHHHHTTCCEEEEE
T ss_pred             CCCcceEEEecCCHHHHHHHHHHhcCceeeeE
Confidence            45899999999999999998885 79988654

>d2f06a1 d.58.18.11 (A:71-141) Hypothetical protein BT0572 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: ACT-like
family: BT0572-like
domain: Hypothetical protein BT0572
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=83.02  E-value=1  Score=25.99  Aligned_cols=28  Identities=14%  Similarity=0.190  Sum_probs=24.7

Q ss_pred             ceEEEEEeCCHHHHHHHHHhcCCEEeec
Q 029933          123 FGHIGITVDDVYKACERFERLGVEFAKK  150 (185)
Q Consensus       123 ~~hi~~~v~dv~~~~~~l~~~G~~~~~~  150 (185)
                      ...+.|.|+|.+.+.+.|+++|+++..+
T Consensus        38 ~~~~vl~vdd~~~a~~~L~~~G~~vl~~   65 (71)
T d2f06a1          38 VANVVIRPSNMDKCIEVLKEKKVDLLAA   65 (71)
T ss_dssp             EEEEEEEESCHHHHHHHHHHTTCEEECH
T ss_pred             cEEEEEEECCHHHHHHHHHHCCCEEEch
Confidence            3578899999999999999999998753

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

Probab=82.02  E-value=2  Score=26.71  Aligned_cols=55  Identities=20%  Similarity=0.316  Sum_probs=35.2

Q ss_pred             CceEEEEEeCCHHHHHHHHHh-cCCEEeecCCC--CccceEEEEECCCCcEEEEeecCc
Q 029933          122 GFGHIGITVDDVYKACERFER-LGVEFAKKPDG--GKLKGVAFIKDPDDYWIEIFDLKT  177 (185)
Q Consensus       122 g~~hi~~~v~dv~~~~~~l~~-~G~~~~~~~~~--~~~~~~~~~~DPdG~~iEl~~~~~  177 (185)
                      ++.||.+.|.|+++..+.+.. .|.++......  .......++. ..+..+++.+...
T Consensus         4 ~i~Hi~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~   61 (130)
T d1r9ca_           4 GLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFL-IGDIWVAIMQGEK   61 (130)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHHHCCEEEEEGGGSTTCCSCEEEEE-ETTEEEEEEECCC
T ss_pred             cEeEEEEEeCCHHHHHHHHHHhcCCEEEEEcCCccccceeEEEEe-cCCEEEeeccccc
Confidence            679999999999999888874 69887754321  1111223332 3456666665443

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

Probab=80.45  E-value=2.5  Score=26.67  Aligned_cols=30  Identities=20%  Similarity=0.432  Sum_probs=26.2

Q ss_pred             CceEEEEEeCCHHHHHHHHHh-cCCEEeecC
Q 029933          122 GFGHIGITVDDVYKACERFER-LGVEFAKKP  151 (185)
Q Consensus       122 g~~hi~~~v~dv~~~~~~l~~-~G~~~~~~~  151 (185)
                      +++||+|.|+|+++..+...+ .|.++....
T Consensus         4 ~l~Hi~l~v~d~~~~~~FY~~vLG~~~~~~~   34 (140)
T d1npba_           4 SLNHLTLAVSDLQKSVTFWHELLGLTLHARW   34 (140)
T ss_dssp             EEEEEEEEESCHHHHHHHHHTTSCCEEEEEE
T ss_pred             cEeEEEEEeCCHHHHHHHHHHHhCCEEEEEe
Confidence            789999999999999999986 799887654

>d1cjxa1 d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=80.30  E-value=0.91  Score=30.09  Aligned_cols=31  Identities=19%  Similarity=0.156  Sum_probs=27.3

Q ss_pred             CCceEEEEEeCCHHHHHHHHHhcCCEEeecC
Q 029933          121 RGFGHIGITVDDVYKACERFERLGVEFAKKP  151 (185)
Q Consensus       121 ~g~~hi~~~v~dv~~~~~~l~~~G~~~~~~~  151 (185)
                      .|+.||.|.|+|++++.+.+.+.|.+....-
T Consensus         8 ~Gidhv~fav~d~~~~~~~~~~lGF~~~~~~   38 (150)
T d1cjxa1           8 MGFEFIEFASPTPGTLEPIFEIMGFTKVATH   38 (150)
T ss_dssp             EEEEEEEEECSSTTSSHHHHHHTTCEEEEEE
T ss_pred             CCEEEEEEecCCHHHHHHHHHHhCCEEEecc
Confidence            4889999999999999999999999887653

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=80.17  E-value=2  Score=27.39  Aligned_cols=31  Identities=32%  Similarity=0.437  Sum_probs=26.3

Q ss_pred             CceEEEEEeCCHHHHHHHHHh-cCCEEeecCC
Q 029933          122 GFGHIGITVDDVYKACERFER-LGVEFAKKPD  152 (185)
Q Consensus       122 g~~hi~~~v~dv~~~~~~l~~-~G~~~~~~~~  152 (185)
                      .+.||.|.|+|+++..+.+.. .|.++.....
T Consensus         7 rl~Hv~l~v~D~~~s~~FY~~vLG~~~~~~~~   38 (145)
T d1mpya1           7 RPGHVQLRVLDMSKALEHYVELLGLIEMDRDD   38 (145)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCCEEEEECT
T ss_pred             EeeeEEEEeCCHHHHHHHHHHhhCCEEEEeec
Confidence            468999999999999999975 7999886643