Citrus Sinensis ID: 029999

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180----
Protein Sequence
MIPDQAAHNKFIAQASIAMASEEFRLVSPEINHQGRLPRKYTNEGQGAKKNISPRLEWYNVPEGTKSLALVVEDIDAPDPSGPIVPWTHWVVVNIPPTLKGLPEGFSGKEEEIGGEYAGIKEGNNDWKVPGWRGPKLPNHGHRFQFKLYALDDEMHLGNKVTKERLLEAIEGHVLGEAVLTAIF
Secondary Structure (PSIPRED)
cccHHHHHHHHHHHHHHHcccccEEEEccccccccccccccccccccccccccccEEEcccccccEEEEEEEEcccccccccccccEEEEEEEccccccccccccccccccccccccccEEEEcccccccccccccccccccEEEEEEEEEcccccccccccHHHHHHHHHccEEEEEEEEEEc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHHccccEEEEccccccccccccEEEEccccccccccccEEEEcccccccEEEEEEEEccccccccccccEEEEEEEEccccccccccccccccccccccccccEEccccccccccccccccccccEEEEEEEEEcccccccccccHHHHHHHHHHcHHHEEEEEEEc
Coil and Loop (DISEMBL)
MIPDQAAHNKFIAQASIAMASEEfrlvspeinhqgrlprkytnegqgakknisprlewynvpegtkSLALVVedidapdpsgpivpwthwvvvnipptlkglpegfsgkeeeiggeyagikegnndwkvpgwrgpklpnhghrfqfklyalddemhlgnKVTKERLLEAIEGHVLGEAVLTAIF
Flexible Loop (DISEMBL)
MIPDQAAHNKFIAQASIAMASEEFRLVSpeinhqgrlprkytnegqgakknisprlewynvPEGTKSLALVVEDIDAPDPSGPIVPWTHWVVVNIPPTLKGLPEGFSGKEEEIGGEYAGIKEGNNDWKVPGWRGPKLPNHGHRFQFKLYALDDEMHLGNKVTKERLLEAIeghvlgeavltaif
Low Complexity Region (SEG)
MIPDQAAHNKFIAQASIAMASEEFRLVSPEINHQGRLPRKYTNEGQGAKKNISPRLEWYNVPEGTKSLALVVEDIDAPDPSGPIVPWTHWVVVNIPPTLKGLPEGFSGKEEEIGGEYAGIKEGNNDWKVPGWRGPKLPNHGHRFQFKLYALDDEMHLGNKVTKERLLEAIEGHVLGEAVLTAIF
Disordered region (IsUnstruct)
******************************************************RLEWYNVPEGTKSLALVVEDIDAPDPSGPIVPWTHWVVVNIPPTLKGLPEGFS****EIGGEYAGIKEGNNDWKVPGWRGPKLPNHGHRFQFKLYALDDEMHLGNKVTKERLLEAIEGHVLGEAVLTA**
Disordered Region (DISOPRED)
********NKFIAQASIAMASEEFRLVSPEINHQGRLPRKYTNEGQGAKKNISPRLEWYNVPEGTKSLALVVEDIDAPDPSGPIVPWTHWVVVNIPPTLKGLPE***********EYAGIKEGNNDWKVPGWRGPKLPNHGHRFQFKLYALDDEMHLGNKVTKERLLEAIEGHVLGEAVLTAIF
Disordered Region (DISEMBL)
MIPDQAAHNKFIAQASIAMASEEFRLVSPEINHQGRLPRKYTNEGQGAKKNISPRLEWYNVPEGTKSLALVVEDIDAPDPSGPIVPWTHWVVVNIPPTLKGLPEGFSGKEEEIGGEYAGIKEGNNDWKVPGWRGPKLPNHGHRFQFKLYALDDEMHLGNKVTKERLLEAIEGHVLGEAVLTAIF
Disordered Region (DISPRO)
MIPDQAAHNKFIAQASIAMASEEFRLVSPEINHQGRLPRKYTNEGQGAKKNISPRLEWYNVPEGTKSLALVVEDIDAPDPSGPIVPWTHWVVVNIPPTLKGLPEGFSGKEEEIGGEYAGIKEGNNDWKVPGWRGPKLPNHGHRFQFKLYALDDEMHLGNKVTKERLLEAIEGHVLGEAVLTAIF
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MIPDQAAHNKFIAQASIAMASEEFRLVSPEINHQGRLPRKYTNEGQGAKKNISPRLEWYNVPEGTKSLALVVEDIDAPDPSGPIVPWTHWVVVNIPPTLKGLPEGFSGKEEEIGGEYAGIKEGNNDWKVPGWRGPKLPNHGHRFQFKLYALDDEMHLGNKVTKERLLEAIEGHVLGEAVLTAIF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	184	2.2.26 [Sep-21-2011]
O26373	151	UPF0098 protein MTH_273 O	yes	no	0.766	0.933	0.448	2e-26
Q9Z729	150	UPF0098 protein CPn_0877/	yes	no	0.798	0.98	0.347	1e-18
Q9PLJ0	150	UPF0098 protein TC_0109 O	yes	no	0.798	0.98	0.347	9e-18
O84741	150	UPF0098 protein CT_736 OS	yes	no	0.798	0.98	0.335	4e-17
O67293	171	UPF0098 protein aq_1250 O	yes	no	0.728	0.783	0.370	8e-16
O58984	198	UPF0098 protein PH1269 OS	yes	no	0.934	0.868	0.331	2e-15
P12994	158	UPF0098 protein YbhB OS=E	N/A	no	0.836	0.974	0.329	2e-15
P77368	183	UPF0098 protein YbcL OS=E	N/A	no	0.755	0.759	0.366	2e-14
Q9UZJ3	178	UPF0098 protein PYRAB1153	yes	no	0.739	0.764	0.36	4e-14
O28575	287	UPF0098 protein AF_1698 O	yes	no	0.728	0.466	0.335	2e-13

>sp|O26373|Y273_METTH UPF0098 protein MTH_273 OS=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) GN=MTH_273 PE=3 SV=1

 Score =  118 bits (296), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 69/154 (44%), Positives = 89/154 (57%), Gaps = 13/154 (8%)

Query: 31  INHQGRLPRKYTNEGQGAKKNISPRLEWYNVPEGTKSLALVVEDIDAPDPSGPIVPWTHW 90
            N +GR+P +YT +G+    NISP L W  VP   KSLAL+ +D DAP        WTHW
Sbjct: 8   FNDRGRIPSRYTCDGE----NISPPLSWDGVPGEAKSLALICDDPDAPSKV-----WTHW 58

Query: 91  VVVNIPPTLKGLPEGFSGKEEEIGGEYAGIKEGNNDWKVPGWRGPKLPNHGHRFQFKLYA 150
           V+ NIPP   GL E       + G    G  +G ND    G+RGP  P+  HR+ F+LYA
Sbjct: 59  VIFNIPPDSTGLEENVP----DAGRLPDGSVQGYNDSGTLGYRGPCPPSGVHRYFFRLYA 114

Query: 151 LDDEMHLGNKVTKERLLEAIEGHVLGEAVLTAIF 184
           LD  + L    +KE +LEA+EGHVLGEA L  ++
Sbjct: 115 LDTVLDLEPGASKEDVLEAMEGHVLGEAKLIGLY 148

Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) (taxid: 187420)

>sp|Q9Z729|Y877_CHLPN UPF0098 protein CPn_0877/CP_0992/CPj0877/CpB0906 OS=Chlamydia pneumoniae GN=CPn_0877 PE=3 SV=1

 Score = 92.8 bits (229), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 56/161 (34%), Positives = 84/161 (52%), Gaps = 14/161 (8%)

Query: 24  FRLVSPEINHQGRLPRKYTNEGQGAKKNISPRLEWYNVPEGTKSLALVVEDIDAPDPSGP 83
            +L+SP   +   +P+KYT +G G    ISP L + +VP   +SLAL+VED D P     
Sbjct: 1   MQLLSPAFAYGAPIPKKYTCQGAG----ISPPLTFVDVPGAAQSLALIVEDPDVPKEIRS 56

Query: 84  IVPWTHWVVVNIPPTLKGLPEGFSGKEEEIGGEYAGIKEGNNDWKVPGWRGPKLPNHGHR 143
              W HW+V N+  T+  L EG          E   ++  N   K P + GP  P+  HR
Sbjct: 57  DGLWIHWIVYNLSTTITNLAEG---------AEIFAVQGLNTSGK-PVYEGPCPPDKQHR 106

Query: 144 FQFKLYALDDEMHLGNKVTKERLLEAIEGHVLGEAVLTAIF 184
           + F L+ALD  +     VT+++L EA+E H++ +A L   +
Sbjct: 107 YFFTLFALDVVLPEEENVTRDQLYEAMEFHIIEQAELMGTY 147

Chlamydia pneumoniae (taxid: 83558)

>sp|Q9PLJ0|Y109_CHLMU UPF0098 protein TC_0109 OS=Chlamydia muridarum (strain MoPn / Nigg) GN=TC_0109 PE=3 SV=1

 Score = 89.7 bits (221), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 56/161 (34%), Positives = 83/161 (51%), Gaps = 14/161 (8%)

Query: 24  FRLVSPEINHQGRLPRKYTNEGQGAKKNISPRLEWYNVPEGTKSLALVVEDIDAPDPSGP 83
            +L S   ++   +P+KY+ +G G    ISP L + ++P   KSLAL+VED D P     
Sbjct: 1   MQLTSQAFSYGRPIPKKYSCQGVG----ISPPLSFSDIPSEAKSLALIVEDPDVPANVRE 56

Query: 84  IVPWTHWVVVNIPPTLKGLPEGFSGKEEEIGGEYAGIKEGNNDWKVPGWRGPKLPNHGHR 143
              W HW+V N+ P +  L EG          +   ++  N   ++ G+  P  P+  HR
Sbjct: 57  DGLWIHWIVYNLSPIVSNLAEG---------AQIFAVQGINTAGEI-GYCPPCPPDAKHR 106

Query: 144 FQFKLYALDDEMHLGNKVTKERLLEAIEGHVLGEAVLTAIF 184
           + F  YALD  +     VTKE+LLEA+EGH+L  A L   +
Sbjct: 107 YYFYAYALDVVLPEEEGVTKEQLLEAMEGHILATAELMGTY 147

Chlamydia muridarum (strain MoPn / Nigg) (taxid: 243161)

>sp|O84741|Y736_CHLTR UPF0098 protein CT_736 OS=Chlamydia trachomatis (strain D/UW-3/Cx) GN=CT_736 PE=1 SV=1

 Score = 87.8 bits (216), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 54/161 (33%), Positives = 82/161 (50%), Gaps = 14/161 (8%)

Query: 24  FRLVSPEINHQGRLPRKYTNEGQGAKKNISPRLEWYNVPEGTKSLALVVEDIDAPDPSGP 83
            +L S   ++   +P+KY+ +G G    ISP L + +VP   KSL L+VED D P     
Sbjct: 1   MQLTSQAFSYGRPIPKKYSCQGVG----ISPPLSFSDVPREAKSLVLIVEDPDVPPSVRE 56

Query: 84  IVPWTHWVVVNIPPTLKGLPEGFSGKEEEIGGEYAGIKEGNNDWKVPGWRGPKLPNHGHR 143
              W HW+V N+ P +  L EG          +   ++  N   ++ G+  P  P+  HR
Sbjct: 57  DGLWIHWIVYNLSPVVSNLAEG---------AQIFAVQGLNTAGEI-GYCPPCPPDAKHR 106

Query: 144 FQFKLYALDDEMHLGNKVTKERLLEAIEGHVLGEAVLTAIF 184
           + F  YALD  +     VTKE+LLEA++GH++  A L   +
Sbjct: 107 YYFYAYALDVVLSDEEGVTKEQLLEAMDGHIIATAELMGTY 147

Chlamydia trachomatis (strain D/UW-3/Cx) (taxid: 272561)

>sp|O67293|Y1250_AQUAE UPF0098 protein aq_1250 OS=Aquifex aeolicus (strain VF5) GN=aq_1250 PE=3 SV=1

 Score = 83.2 bits (204), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 56/151 (37%), Positives = 86/151 (56%), Gaps = 17/151 (11%)

Query: 37  LPRKYTNEGQGAKKNISPRLEWYNVPEGTKSLALVVEDIDAPDPSGPIVPWTHWVVVNIP 96
           +P+ YT +G    K+ISP + W +VPEGTKS  L+++D DA     PI  +THWVV +IP
Sbjct: 32  IPKVYTCDG----KDISPHIGWEDVPEGTKSFVLIMDDPDA-----PIGTFTHWVVYDIP 82

Query: 97  PTLKGLPEGFSGKEEEIGGEYAGIKEGNNDWKVPGWRGPKLPN-HG-HRFQFKLYALDDE 154
              + L E F         E +GIK+G ND+   G+ GP  P  HG HR+ FK++AL  E
Sbjct: 83  SQTRELLEDFPKVP-----EVSGIKQGINDFGRVGYGGPCPPRGHGYHRYFFKVFALSVE 137

Query: 155 -MHLGNKVTKERLLEAIEGHVLGEAVLTAIF 184
            + L    +++ +   + G +L +A +  ++
Sbjct: 138 SLGLPPGASRKDVELKMNGKILAQAHIIGLY 168

Aquifex aeolicus (strain VF5) (taxid: 224324)

>sp|O58984|Y1269_PYRHO UPF0098 protein PH1269 OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN=PH1269 PE=3 SV=1

 Score = 82.4 bits (202), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 62/187 (33%), Positives = 98/187 (52%), Gaps = 15/187 (8%)

Query: 1   MIPDQAAHNKFIAQASIAMASEEFRL-VSPEINHQGRLPRKYTNEGQGAKKNISPRLEWY 59
           +IP   A    +    I    E+  L VS    +   +P KYT EG     +I+P L+  
Sbjct: 21  LIPIVLATLVILGMGCIGGGEEKMSLKVSSVFGNNEFIPAKYTCEGV----DINPPLKIE 76

Query: 60  NVPEGTKSLALVVEDIDAPDPSGPIVPWTHWVVVNIPPTLKGLPEGFSGKEEEIGGEYAG 119
            + +  KSL ++V+D DAP  +     +THW+  NIPP  + +PEG   K+ E+  +   
Sbjct: 77  GLSDNVKSLVIIVDDPDAPMGT-----FTHWIAWNIPPVTE-IPEGIP-KQGEVD-KPIH 128

Query: 120 IKEGNNDWKVPGWRGPKLPN-HG-HRFQFKLYALDDEMHLGNKVTKERLLEAIEGHVLGE 177
           I +G ND+   G+ GP  P  HG H + FK+YALD  ++L    +++ L +A+EGHV+  
Sbjct: 129 IIQGRNDFGRIGYNGPCPPRGHGVHHYHFKVYALDTTLNLKPGASRKELEKAMEGHVIQY 188

Query: 178 AVLTAIF 184
             L  ++
Sbjct: 189 GELVGLY 195

Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) (taxid: 70601)

>sp|P12994|YBHB_ECOLI UPF0098 protein YbhB OS=Escherichia coli (strain K12) GN=ybhB PE=1 SV=2

 Score = 82.4 bits (202), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 54/164 (32%), Positives = 81/164 (49%), Gaps = 10/164 (6%)

Query: 24  FRLVSPEINHQGRLPRKYTNEGQGAK-KNISPRLEWYNVPEGTKSLALVVEDIDAPDPSG 82
            +L+S ++    +LP ++   G G    NISP L W +VP GTKS  +   D DAP  SG
Sbjct: 1   MKLISNDLRDGDKLPHRHVFNGMGYDGDNISPHLAWDDVPAGTKSFVVTCYDPDAPTGSG 60

Query: 83  PIVPWTHWVVVNIPPTLKGLPEGFSGKEEEIGGEYAGIKEGNNDWKVPGWRGPKLP-NHG 141
               W HWVVVN+P   + LP+GF      +     G+ +   D+   G+ G   P    
Sbjct: 61  ----WWHWVVVNLPADTRVLPQGFGSGLVAMPD---GVLQTRTDFGKTGYDGAAPPKGET 113

Query: 142 HRFQFKLYALDDE-MHLGNKVTKERLLEAIEGHVLGEAVLTAIF 184
           HR+ F ++ALD E + +    +   +   +  H L  A +TA+F
Sbjct: 114 HRYIFTVHALDIERIDVDEGASGAMVGFNVHFHSLASASITAMF 157

Escherichia coli (strain K12) (taxid: 83333)

>sp|P77368|YBCL_ECOLI UPF0098 protein YbcL OS=Escherichia coli (strain K12) GN=ybcL PE=1 SV=1

 Score = 79.0 bits (193), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 55/150 (36%), Positives = 78/150 (52%), Gaps = 11/150 (7%)

Query: 9   NKFIAQASIAMASEEFRLVSPEINHQGRLPRKYTNEGQGAKK-NISPRLEWYNVPEGTKS 67
           +  +A  + +  +  F++ S EI    +L   +   G G +  N SP L W  VPEGTKS
Sbjct: 7   STVLAFITFSAQAAAFQVTSNEIKTGEQLTTSHVFSGFGCEGGNTSPSLTWSGVPEGTKS 66

Query: 68  LALVVEDIDAPDPSGPIVPWTHWVVVNIPPTLKGLPEGFSGKEEEIGGEY-AGIKEGNND 126
            A+ V D DAP  SG    W HW VVNIP T+  LP   +G+ +  G +   G  +G ND
Sbjct: 67  FAVTVYDPDAPTGSG----WWHWTVVNIPATVTYLPVD-AGRRD--GTKLPTGAVQGRND 119

Query: 127 WKVPGWRGPKLP--NHGHRFQFKLYALDDE 154
           +   G+ G   P  +  H +QFK++AL  E
Sbjct: 120 FGYAGFGGACPPKGDKPHHYQFKVWALKTE 149

Escherichia coli (strain K12) (taxid: 83333)

>sp|Q9UZJ3|Y1153_PYRAB UPF0098 protein PYRAB11530 OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=PYRAB11530 PE=3 SV=2

 Score = 77.8 bits (190), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 54/150 (36%), Positives = 84/150 (56%), Gaps = 14/150 (9%)

Query: 37  LPRKYTNEGQGAKKNISPRLEWYNVPEGTKSLALVVEDIDAPDPSGPIVPWTHWVVVNIP 96
           +P KYT EG     +++P L    + E  KSL ++V+D DAP     +  +THW+  NIP
Sbjct: 38  IPAKYTCEG----IDVNPPLRIEGISENAKSLVIIVDDPDAP-----LGTFTHWIAWNIP 88

Query: 97  PTLKGLPEGFSGKEEEIGGEYAGIKEGNNDWKVPGWRGPKLPN-HG-HRFQFKLYALDDE 154
           P ++ +PEG   K+ E+      I +G ND+   G+ GP  P  HG H + FK+Y LD  
Sbjct: 89  P-VEEIPEGIP-KQGEVEKPIHMI-QGRNDFGRIGYNGPCPPRGHGVHHYHFKVYVLDTT 145

Query: 155 MHLGNKVTKERLLEAIEGHVLGEAVLTAIF 184
           ++L    T+E L +A+EGH++    L  ++
Sbjct: 146 LNLRPGATREELEKAMEGHIIQFGELVGLY 175

Pyrococcus abyssi (strain GE5 / Orsay) (taxid: 272844)

>sp|O28575|Y1698_ARCFU UPF0098 protein AF_1698 OS=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) GN=AF_1698 PE=3 SV=1

 Score = 75.5 bits (184), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 50/149 (33%), Positives = 81/149 (54%), Gaps = 15/149 (10%)

Query: 27  VSPEINHQGRLPRKYTNEGQGAKKNISPRLEWYNVPEGTKSLALVVEDIDAPDPSGPIVP 86
           V     + G++P KYT +G+    +ISP L    + E  KSL ++ ED     P  P+  
Sbjct: 141 VKSAFENGGKIPAKYTCDGE----DISPPLYIEGLREDVKSLVIICED-----PDAPMGV 191

Query: 87  WTHWVVVNIPPTLKGLPEGFSGKEEEIGGEYAGIKEGNNDWKVPGWRGPKLPNHGHRFQF 146
           +THW+  N+ PT + +PE    K + +  +   + +G ND+   G+ GP  P+  HR+ F
Sbjct: 192 FTHWIAWNVEPTSE-IPENVP-KTKFV--DEPKMVQGRNDFGKVGYNGPCPPSGEHRYYF 247

Query: 147 KLYALDDEMHLGNKVTKERLLEAIEGHVL 175
           ++YA+D    L    +++ LL AIEGH+L
Sbjct: 248 RIYAID--TLLQGDYSRQELLRAIEGHIL 274

Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) (taxid: 224325)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	184
225439505	166	PREDICTED: UPF0098 protein MTH_273 isofo	0.902	1.0	0.795	1e-73
255579296	165	phosphatidylethanolamine binding protein	0.880	0.981	0.814	4e-73
449439851	167	PREDICTED: UPF0098 protein MTH_273-like	0.880	0.970	0.783	2e-70
224139198	165	predicted protein [Populus trichocarpa]	0.891	0.993	0.780	2e-69
356496233	170	PREDICTED: UPF0098 protein MTH_273-like	0.896	0.970	0.753	6e-67
356503127	170	PREDICTED: UPF0098 protein MTH_273-like	0.896	0.970	0.746	2e-66
297806097	162	predicted protein [Arabidopsis lyrata su	0.875	0.993	0.751	4e-66
297604635	167	Os05g0468800 [Oryza sativa Japonica Grou	0.902	0.994	0.736	1e-65
15240946	162	putative phosphatidylethanolamine-bindin	0.875	0.993	0.733	6e-65
48843750	161	putative cold regulated protein [Oryza s	0.869	0.993	0.706	2e-60

>gi|225439505|ref|XP_002271217.1| PREDICTED: UPF0098 protein MTH_273 isoform 1 [Vitis vinifera] gi|297735647|emb|CBI18141.3| unnamed protein product [Vitis vinifera]

 Score =  281 bits (718), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 132/166 (79%), Positives = 154/166 (92%)

Query: 19  MASEEFRLVSPEINHQGRLPRKYTNEGQGAKKNISPRLEWYNVPEGTKSLALVVEDIDAP 78
           MAS+EFRLVSP++N++GRLPRKYT EGQGA+K+ISP LEWYN+P+GTK+LALVV+DIDAP
Sbjct: 1   MASDEFRLVSPQVNNEGRLPRKYTAEGQGAQKHISPPLEWYNLPDGTKTLALVVQDIDAP 60

Query: 79  DPSGPIVPWTHWVVVNIPPTLKGLPEGFSGKEEEIGGEYAGIKEGNNDWKVPGWRGPKLP 138
           DP  PIVPW HWVVVNIPPTLKGLPEGFSGKEE   G+YAGIKEG ND+K+PGWRG KLP
Sbjct: 61  DPKDPIVPWVHWVVVNIPPTLKGLPEGFSGKEEVYSGDYAGIKEGYNDFKLPGWRGTKLP 120

Query: 139 NHGHRFQFKLYALDDEMHLGNKVTKERLLEAIEGHVLGEAVLTAIF 184
           +HGHRF+FKLYALD+E+ LGNKVTK++LL+AI+GHVLGEAVL AIF
Sbjct: 121 SHGHRFEFKLYALDEEVKLGNKVTKDKLLDAIQGHVLGEAVLIAIF 166

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255579296|ref|XP_002530493.1| phosphatidylethanolamine binding protein, putative [Ricinus communis] gi|223529950|gb|EEF31877.1| phosphatidylethanolamine binding protein, putative [Ricinus communis]

 Score =  279 bits (713), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 132/162 (81%), Positives = 150/162 (92%)

Query: 23  EFRLVSPEINHQGRLPRKYTNEGQGAKKNISPRLEWYNVPEGTKSLALVVEDIDAPDPSG 82
           EFRLVSPEI+ +G+LPRKYT+EGQGA++N+SP LEWYNVPEGTKSLALVV+DIDAPDP G
Sbjct: 4   EFRLVSPEIDQEGKLPRKYTDEGQGARRNLSPPLEWYNVPEGTKSLALVVQDIDAPDPGG 63

Query: 83  PIVPWTHWVVVNIPPTLKGLPEGFSGKEEEIGGEYAGIKEGNNDWKVPGWRGPKLPNHGH 142
           PIVPWT WVVVNIPPT+  LPEGFSGKEE++G EYAGI+EGNND KVPGWRGPKLP+HGH
Sbjct: 64  PIVPWTVWVVVNIPPTINRLPEGFSGKEEKVGDEYAGIREGNNDLKVPGWRGPKLPSHGH 123

Query: 143 RFQFKLYALDDEMHLGNKVTKERLLEAIEGHVLGEAVLTAIF 184
           RF+FKL+ALDDE+ LGN+VTKERLLE I+GHVLGEAVL A F
Sbjct: 124 RFEFKLFALDDEIELGNRVTKERLLEEIQGHVLGEAVLIAKF 165

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449439851|ref|XP_004137699.1| PREDICTED: UPF0098 protein MTH_273-like [Cucumis sativus] gi|449483543|ref|XP_004156621.1| PREDICTED: UPF0098 protein MTH_273-like [Cucumis sativus]

 Score =  270 bits (689), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 127/162 (78%), Positives = 147/162 (90%)

Query: 23  EFRLVSPEINHQGRLPRKYTNEGQGAKKNISPRLEWYNVPEGTKSLALVVEDIDAPDPSG 82
           EFRLVS  I+H+GRLPRKYT+EGQGA+KN SP LEWYN+P+GTK+LALVV+DIDAPDPSG
Sbjct: 6   EFRLVSSAIDHEGRLPRKYTSEGQGAQKNKSPPLEWYNLPKGTKTLALVVQDIDAPDPSG 65

Query: 83  PIVPWTHWVVVNIPPTLKGLPEGFSGKEEEIGGEYAGIKEGNNDWKVPGWRGPKLPNHGH 142
           PIVPWT WVVVNIPPTLKGLPE FSG ++ +GG+YA I+EGNND KVPGWR P LP+HGH
Sbjct: 66  PIVPWTVWVVVNIPPTLKGLPEDFSGNQQGLGGDYATIQEGNNDEKVPGWRAPTLPSHGH 125

Query: 143 RFQFKLYALDDEMHLGNKVTKERLLEAIEGHVLGEAVLTAIF 184
           RF+FKLYALDD ++LGNK TK++LLEAIEGHVLGEAVL A+F
Sbjct: 126 RFEFKLYALDDHLNLGNKATKDKLLEAIEGHVLGEAVLMAVF 167

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224139198|ref|XP_002323004.1| predicted protein [Populus trichocarpa] gi|222867634|gb|EEF04765.1| predicted protein [Populus trichocarpa]

 Score =  267 bits (682), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 128/164 (78%), Positives = 145/164 (88%)

Query: 21  SEEFRLVSPEINHQGRLPRKYTNEGQGAKKNISPRLEWYNVPEGTKSLALVVEDIDAPDP 80
           ++EFRLVSPEI+++GRLPRKYT EGQGAKKN+SP +EWYNVPEGTKSLALVV+D+D  DP
Sbjct: 2   ADEFRLVSPEIDNEGRLPRKYTGEGQGAKKNLSPPVEWYNVPEGTKSLALVVQDLDISDP 61

Query: 81  SGPIVPWTHWVVVNIPPTLKGLPEGFSGKEEEIGGEYAGIKEGNNDWKVPGWRGPKLPNH 140
            GP VPW HWVVVNIPP ++ LPEGFSGKEEE GGEYA IKEG N WK+PGWRGP LP H
Sbjct: 62  DGPNVPWPHWVVVNIPPHVRRLPEGFSGKEEEFGGEYAVIKEGVNGWKLPGWRGPVLPKH 121

Query: 141 GHRFQFKLYALDDEMHLGNKVTKERLLEAIEGHVLGEAVLTAIF 184
           GHRF+FKLYALDDE+HLGNKVTKE+L EA++GHVLGEAVL   F
Sbjct: 122 GHRFEFKLYALDDELHLGNKVTKEKLEEAVQGHVLGEAVLKCRF 165

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356496233|ref|XP_003516973.1| PREDICTED: UPF0098 protein MTH_273-like [Glycine max]

 Score =  258 bits (660), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 125/166 (75%), Positives = 140/166 (84%), Gaps = 1/166 (0%)

Query: 20  ASEEFRLVSPEINHQGRLPRKYTNEGQGAKKNISPRLEWYNVPEGTKSLALVVEDIDAPD 79
            SEEFRLVSP  +++G+LPR YT+EGQGAKKNISP LEWYN+PEGTK+LALVVEDID  D
Sbjct: 5   GSEEFRLVSPAFSNEGKLPRNYTDEGQGAKKNISPPLEWYNLPEGTKTLALVVEDIDGSD 64

Query: 80  PSGPIVPWTHWVVVNIPPTLKGLPEGFSGKEEEIGGEYAGIKEGNNDWKVPGWRGPKLPN 139
             GPI+PWTHWVV NIP T+KGLPEGFSGK  E+GG+YA IKEGNND K  GW GP+LP 
Sbjct: 65  SDGPIMPWTHWVVANIPATVKGLPEGFSGKAAEMGGDYATIKEGNNDLKKTGWNGPRLPT 124

Query: 140 HGHRFQFKLYALDDEMHLGNKVTKERLL-EAIEGHVLGEAVLTAIF 184
            GHR QF+LYALDDE+ LGNKVTKE+LL E IEGHVLGEA L AIF
Sbjct: 125 PGHRIQFRLYALDDELKLGNKVTKEKLLEETIEGHVLGEATLMAIF 170

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356503127|ref|XP_003520363.1| PREDICTED: UPF0098 protein MTH_273-like [Glycine max]

 Score =  256 bits (655), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 124/166 (74%), Positives = 139/166 (83%), Gaps = 1/166 (0%)

Query: 20  ASEEFRLVSPEINHQGRLPRKYTNEGQGAKKNISPRLEWYNVPEGTKSLALVVEDIDAPD 79
            SEEFRLVSP   + G+LPR YT++GQG KKNISP LEWYN+PEGTK+LALVVEDIDA D
Sbjct: 5   GSEEFRLVSPAFKNGGKLPRHYTDDGQGTKKNISPPLEWYNLPEGTKTLALVVEDIDATD 64

Query: 80  PSGPIVPWTHWVVVNIPPTLKGLPEGFSGKEEEIGGEYAGIKEGNNDWKVPGWRGPKLPN 139
             GP+VPWTHWVV NI  T+KGLPEGFSGK  E+GG+YA IKEGNND KVPGW GP+LP 
Sbjct: 65  SGGPMVPWTHWVVANILATVKGLPEGFSGKSAEMGGDYAAIKEGNNDLKVPGWNGPRLPT 124

Query: 140 HGHRFQFKLYALDDEMHLGNKVTKERLLE-AIEGHVLGEAVLTAIF 184
            GHR QF+LYALDDE+ LGNK+TKE+LLE  IEGHVLGEA L AIF
Sbjct: 125 PGHRIQFRLYALDDELKLGNKLTKEKLLEDTIEGHVLGEATLMAIF 170

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297806097|ref|XP_002870932.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297316769|gb|EFH47191.1| predicted protein [Arabidopsis lyrata subsp. lyrata]

 Score =  256 bits (653), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 124/165 (75%), Positives = 142/165 (86%), Gaps = 4/165 (2%)

Query: 19  MASEEFRLVSPEINHQGRLPRKYTNEGQGAKKNISPRLEWYNVPEGTKSLALVVEDIDAP 78
           M+SEEFRLVSP I++ G LPRKYT  GQGAKK++SP LEWYNVPEGTKSLALVVEDIDAP
Sbjct: 1   MSSEEFRLVSPTIDNDGNLPRKYTQGGQGAKKDLSPPLEWYNVPEGTKSLALVVEDIDAP 60

Query: 79  DPSGPIVPWTHWVVVNIPPTLKGLPEGFSGKEEEIGGEYAGIKEGNNDWKVPGWRGPKLP 138
           DPSGP+VPWT WVVV+IPP +KGLPEG+SG EE+      GI+EGNND K+PGWRGP LP
Sbjct: 61  DPSGPLVPWTVWVVVDIPPEMKGLPEGYSGTEEQT----TGIREGNNDHKIPGWRGPLLP 116

Query: 139 NHGHRFQFKLYALDDEMHLGNKVTKERLLEAIEGHVLGEAVLTAI 183
           +HGHRFQFKL+ALDD   +G+ VTKERLL AIEGHVLGEA+LT +
Sbjct: 117 SHGHRFQFKLFALDDTPKIGHTVTKERLLIAIEGHVLGEAILTCV 161

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297604635|ref|NP_001055802.2| Os05g0468800 [Oryza sativa Japonica Group] gi|218196952|gb|EEC79379.1| hypothetical protein OsI_20287 [Oryza sativa Indica Group] gi|255676433|dbj|BAF17716.2| Os05g0468800 [Oryza sativa Japonica Group]

 Score =  254 bits (648), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 123/167 (73%), Positives = 139/167 (83%), Gaps = 1/167 (0%)

Query: 19  MASEEFRLVS-PEINHQGRLPRKYTNEGQGAKKNISPRLEWYNVPEGTKSLALVVEDIDA 77
           MA E  RLVS P   H+GRLPR YT EGQGAKK+ISP +EWY VP+GT+SLALVV D+DA
Sbjct: 1   MAQESLRLVSHPIAAHEGRLPRHYTLEGQGAKKDISPPVEWYGVPDGTRSLALVVHDVDA 60

Query: 78  PDPSGPIVPWTHWVVVNIPPTLKGLPEGFSGKEEEIGGEYAGIKEGNNDWKVPGWRGPKL 137
           PDP GPIVPWTHWVV NIPP++KGLPEGFSGKE     EY GI+EG NDWK PGWRGP  
Sbjct: 61  PDPDGPIVPWTHWVVANIPPSVKGLPEGFSGKEGAAAREYGGIQEGVNDWKQPGWRGPIP 120

Query: 138 PNHGHRFQFKLYALDDEMHLGNKVTKERLLEAIEGHVLGEAVLTAIF 184
           P+ GHR QFKLYALDDE+HLGNKVTK++L++AIEGHVLGEA L A+F
Sbjct: 121 PSRGHRIQFKLYALDDEVHLGNKVTKDKLMDAIEGHVLGEAELMAVF 167

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15240946|ref|NP_195750.1| putative phosphatidylethanolamine-binding protein [Arabidopsis thaliana] gi|7320708|emb|CAB81913.1| putative protein [Arabidopsis thaliana] gi|17529168|gb|AAL38810.1| unknown protein [Arabidopsis thaliana] gi|20465385|gb|AAM20117.1| unknown protein [Arabidopsis thaliana] gi|332002941|gb|AED90324.1| putative phosphatidylethanolamine-binding protein [Arabidopsis thaliana]

 Score =  251 bits (642), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 121/165 (73%), Positives = 142/165 (86%), Gaps = 4/165 (2%)

Query: 19  MASEEFRLVSPEINHQGRLPRKYTNEGQGAKKNISPRLEWYNVPEGTKSLALVVEDIDAP 78
           M+SEE RLVSP I++ G+LPRKYT  GQG KK+ISP LEWYNVPEGTK+LALVVEDIDAP
Sbjct: 1   MSSEELRLVSPTIDNDGKLPRKYTMAGQGVKKDISPPLEWYNVPEGTKTLALVVEDIDAP 60

Query: 79  DPSGPIVPWTHWVVVNIPPTLKGLPEGFSGKEEEIGGEYAGIKEGNNDWKVPGWRGPKLP 138
           DPSGP+VPWT WVVV+IPP +KGLPEG+SG E++      GI+EGNND K+PGWRGP LP
Sbjct: 61  DPSGPLVPWTVWVVVDIPPEMKGLPEGYSGNEDQT----TGIREGNNDHKIPGWRGPLLP 116

Query: 139 NHGHRFQFKLYALDDEMHLGNKVTKERLLEAIEGHVLGEAVLTAI 183
           +HGHRFQFKL+ALDD+  +G+ VTKERLL AIEGHVLGEA+LT +
Sbjct: 117 SHGHRFQFKLFALDDKPKIGHTVTKERLLIAIEGHVLGEAILTCL 161

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|48843750|gb|AAT47009.1| putative cold regulated protein [Oryza sativa Japonica Group]

 Score =  236 bits (603), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 118/167 (70%), Positives = 133/167 (79%), Gaps = 7/167 (4%)

Query: 19  MASEEFRLVS-PEINHQGRLPRKYTNEGQGAKKNISPRLEWYNVPEGTKSLALVVEDIDA 77
           MA E  RLVS P   H+GRLPR YT EGQGAKK+ISP +EWY VP+GT+SLALVV D+DA
Sbjct: 1   MAQESLRLVSHPIAAHEGRLPRHYTLEGQGAKKDISPPVEWYGVPDGTRSLALVVHDVDA 60

Query: 78  PDPSGPIVPWTHWVVVNIPPTLKGLPEGFSGKEEEIGGEYAGIKEGNNDWKVPGWRGPKL 137
           PDP GPIVPWTHWVV NIPP++KGLPEGFSGKE     EY GI+EG NDWK PGWRGP  
Sbjct: 61  PDPDGPIVPWTHWVVANIPPSVKGLPEGFSGKEGAAAREYGGIQEGVNDWKQPGWRGPIP 120

Query: 138 PNHGHRFQFKLYALDDEMHLGNKVTKERLLEAIEGHVLGEAVLTAIF 184
           P+ GHR QFKLYALDDE      VTK++L++AIEGHVLGEA L A+F
Sbjct: 121 PSRGHRIQFKLYALDDE------VTKDKLMDAIEGHVLGEAELMAVF 161

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	184
TAIR|locus:2179117	162	AT5G01300 [Arabidopsis thalian	0.875	0.993	0.733	1.4e-64
UNIPROTKB|Q60CG5	156	MCA0141 "Putative uncharacteri	0.755	0.891	0.453	1.9e-28
TIGR_CMR|DET_0532	150	DET_0532 "phosphatidylethanola	0.728	0.893	0.402	2.4e-21
UNIPROTKB|P12994	158	ybhB "predicted kinase inhibit	0.826	0.962	0.341	6.7e-17
UNIPROTKB|Q9KT30	180	VC1075 "Putative uncharacteriz	0.847	0.866	0.321	6.7e-17
TIGR_CMR|VC_1075	180	VC_1075 "conserved hypothetica	0.847	0.866	0.321	6.7e-17
UNIPROTKB|P77368	183	ybcL "DLP12 prophage; periplas	0.739	0.743	0.374	1.1e-16
UNIPROTKB|Q8EJZ0	182	ybcL "Phosphatidylethanolamine	0.858	0.868	0.315	2.6e-15
TIGR_CMR|SO_0316	182	SO_0316 "conserved hypothetica	0.858	0.868	0.315	2.6e-15
UNIPROTKB|Q47ZM4	185	CPS_3047 "Putative uncharacter	0.885	0.881	0.312	1.4e-14

TAIR|locus:2179117 AT5G01300 [Arabidopsis thaliana (taxid:3702)]

 Score = 658 (236.7 bits), Expect = 1.4e-64, P = 1.4e-64
 Identities = 121/165 (73%), Positives = 142/165 (86%)

Query:    19 MASEEFRLVSPEINHQGRLPRKYTNEGQGAKKNISPRLEWYNVPEGTKSLALVVEDIDAP 78
             M+SEE RLVSP I++ G+LPRKYT  GQG KK+ISP LEWYNVPEGTK+LALVVEDIDAP
Sbjct:     1 MSSEELRLVSPTIDNDGKLPRKYTMAGQGVKKDISPPLEWYNVPEGTKTLALVVEDIDAP 60

Query:    79 DPSGPIVPWTHWVVVNIPPTLKGLPEGFSGKEEEIGGEYAGIKEGNNDWKVPGWRGPKLP 138
             DPSGP+VPWT WVVV+IPP +KGLPEG+SG E++      GI+EGNND K+PGWRGP LP
Sbjct:    61 DPSGPLVPWTVWVVVDIPPEMKGLPEGYSGNEDQT----TGIREGNNDHKIPGWRGPLLP 116

Query:   139 NHGHRFQFKLYALDDEMHLGNKVTKERLLEAIEGHVLGEAVLTAI 183
             +HGHRFQFKL+ALDD+  +G+ VTKERLL AIEGHVLGEA+LT +
Sbjct:   117 SHGHRFQFKLFALDDKPKIGHTVTKERLLIAIEGHVLGEAILTCL 161

GO:0005737 "cytoplasm" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0008429 "phosphatidylethanolamine binding" evidence=ISS

GO:0010162 "seed dormancy process" evidence=RCA

GO:0010264 "myo-inositol hexakisphosphate biosynthetic process" evidence=RCA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA

UNIPROTKB|Q60CG5 MCA0141 "Putative uncharacterized protein" [Methylococcus capsulatus str. Bath (taxid:243233)]

 Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
 Identities = 68/150 (45%), Positives = 90/150 (60%)

Query:    35 GRLPRKYTNEGQGAKKNISPRLEWYNVPEGTKSLALVVEDIDAPDPSGPIVPWTHWVVVN 94
             G +PRKYT +G G   ++SP L W  +P GT+SLAL+V+D DAPDP  P + W HWV+ N
Sbjct:    14 GEIPRKYTCDG-G---DVSPPLTWSGLPPGTRSLALIVDDPDAPDPRAPRMTWVHWVLYN 69

Query:    95 IPPTLKGLPEGFSGKEEEIGGEYAGIKEGNNDWKVPGWRGPKLPNHGHRFQFKLYALDDE 154
             +PP   GLPE             AG  +G NDWK  G+ GP  P   HR+  KLYALD  
Sbjct:    70 LPPEAPGLPEAVQALP-------AGTLQGLNDWKRTGYGGPCPPIGRHRYFHKLYALDTV 122

Query:   155 MHLGNKVTKERLLEAIEGHVLGEAVLTAIF 184
             +   ++  K +L +A+ GHVLG+A L  I+
Sbjct:   123 LPDLHRPDKAKLEQAMTGHVLGQAELIGIY 152

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|DET_0532 DET_0532 "phosphatidylethanolamine-binding protein, putative" [Dehalococcoides ethenogenes 195 (taxid:243164)]

 Score = 250 (93.1 bits), Expect = 2.4e-21, P = 2.4e-21
 Identities = 60/149 (40%), Positives = 86/149 (57%)

Query:    37 LPRKYTNEGQGAKKNISPRLEWYNVPEGTKSLALVVEDIDAPDPSGPIVPWTHWVVVNIP 96
             +PR+Y+  G G   NISP LEW  +PEGTKSL L++ED   PD S     +THW++ NIP
Sbjct:    14 IPRRYS--GLGG--NISPPLEWMKLPEGTKSLTLILED---PDASKT---FTHWLIYNIP 63

Query:    97 PTLKGLPEGFSGKEEEIGGEYAGIKEGNNDWKVPGWRGP-KLPNHGHRFQFKLYALDDEM 155
                +GLPE     E  +     GI++G N     G+ GP   PN  H + F+L+ALD  +
Sbjct:    64 SDREGLPEAVPA-EPNLPD---GIRQGLNSAGETGYTGPYPPPNRVHHYHFRLFALDTVL 119

Query:   156 HLGNKVTKERLLEAIEGHVLGEAVLTAIF 184
              L     +  L++A+EGH++ +  LT +F
Sbjct:   120 RLKAGSHQADLIKAMEGHIIDQTDLTGLF 148

GO:0008152 "metabolic process" evidence=ISS

GO:0008429 "phosphatidylethanolamine binding" evidence=ISS

UNIPROTKB|P12994 ybhB "predicted kinase inhibitor" [Escherichia coli K-12 (taxid:83333)]

 Score = 208 (78.3 bits), Expect = 6.7e-17, P = 6.7e-17
 Identities = 56/164 (34%), Positives = 83/164 (50%)

Query:    25 RLVSPEINHQGRLPRKYTNEGQGAK-KNISPRLEWYNVPEGTKSLALVVEDIDAPDPSGP 83
             +L+S ++    +LP ++   G G    NISP L W +VP GTKS  +   D DAP  SG 
Sbjct:     2 KLISNDLRDGDKLPHRHVFNGMGYDGDNISPHLAWDDVPAGTKSFVVTCYDPDAPTGSG- 60

Query:    84 IVPWTHWVVVNIPPTLKGLPEGF-SGKEEEIGGEYAGIKEGNNDWKVPGWRGPKLPN-HG 141
                W HWVVVN+P   + LP+GF SG    +     G+ +   D+   G+ G   P    
Sbjct:    61 ---WWHWVVVNLPADTRVLPQGFGSG----LVAMPDGVLQTRTDFGKTGYDGAAPPKGET 113

Query:   142 HRFQFKLYALDDE-MHLGNKVTKERLLEAIEGHVLGEAVLTAIF 184
             HR+ F ++ALD E + +    +   +   +  H L  A +TA+F
Sbjct:   114 HRYIFTVHALDIERIDVDEGASGAMVGFNVHFHSLASASITAMF 157

GO:0005737 "cytoplasm" evidence=IEA

UNIPROTKB|Q9KT30 VC1075 "Putative uncharacterized protein VC1075" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)]

 Score = 208 (78.3 bits), Expect = 6.7e-17, P = 6.7e-17
 Identities = 55/171 (32%), Positives = 87/171 (50%)

Query:    18 AMASEEFRLVSPEINHQGRLPRKYTNEGQGAK-KNISPRLEWYNVPEGTKSLALVVEDID 76
             A++S    L S +I    R+ + +   G G    N+SP+L W N P+GTKS A+   D D
Sbjct:    18 ALSSPVMTLTSQDIQEGSRMAKHFVFNGFGCSGDNLSPQLSWNNAPKGTKSFAITAYDPD 77

Query:    77 APDPSGPIVPWTHWVVVNIPPTLKGLPEGFSGKEEEIGGEYAGIKEGNNDWKVPGWRGPK 136
             AP  SG    W HWV ++I      +  G + K+ +      G++E NND+   G+ G  
Sbjct:    78 APTGSG----WWHWVALDIAADQHNVARG-AAKQLK------GVRELNNDYGFSGFGGAC 126

Query:   137 LPN-HG-HRFQFKLYALD-DEMHLGNKVTKERLLEAIEGHVLGEAVLTAIF 184
              P  HG HR+QF ++AL  ++M +    +   +   +  + L +A LTA +
Sbjct:   127 PPQGHGMHRYQFTVWALPFEKMEIPQGASNALVGFMLRANALEQATLTATY 177

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|VC_1075 VC_1075 "conserved hypothetical protein" [Vibrio cholerae O1 biovar El Tor (taxid:686)]

 Score = 208 (78.3 bits), Expect = 6.7e-17, P = 6.7e-17
 Identities = 55/171 (32%), Positives = 87/171 (50%)

Query:    18 AMASEEFRLVSPEINHQGRLPRKYTNEGQGAK-KNISPRLEWYNVPEGTKSLALVVEDID 76
             A++S    L S +I    R+ + +   G G    N+SP+L W N P+GTKS A+   D D
Sbjct:    18 ALSSPVMTLTSQDIQEGSRMAKHFVFNGFGCSGDNLSPQLSWNNAPKGTKSFAITAYDPD 77

Query:    77 APDPSGPIVPWTHWVVVNIPPTLKGLPEGFSGKEEEIGGEYAGIKEGNNDWKVPGWRGPK 136
             AP  SG    W HWV ++I      +  G + K+ +      G++E NND+   G+ G  
Sbjct:    78 APTGSG----WWHWVALDIAADQHNVARG-AAKQLK------GVRELNNDYGFSGFGGAC 126

Query:   137 LPN-HG-HRFQFKLYALD-DEMHLGNKVTKERLLEAIEGHVLGEAVLTAIF 184
              P  HG HR+QF ++AL  ++M +    +   +   +  + L +A LTA +
Sbjct:   127 PPQGHGMHRYQFTVWALPFEKMEIPQGASNALVGFMLRANALEQATLTATY 177

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|P77368 ybcL "DLP12 prophage; periplasmic protein" [Escherichia coli K-12 (taxid:83333)]

 Score = 206 (77.6 bits), Expect = 1.1e-16, P = 1.1e-16
 Identities = 55/147 (37%), Positives = 77/147 (52%)

Query:    12 IAQASIAMASEEFRLVSPEINHQGRLPRKYTNEGQGAKK-NISPRLEWYNVPEGTKSLAL 70
             +A  + +  +  F++ S EI    +L   +   G G +  N SP L W  VPEGTKS A+
Sbjct:    10 LAFITFSAQAAAFQVTSNEIKTGEQLTTSHVFSGFGCEGGNTSPSLTWSGVPEGTKSFAV 69

Query:    71 VVEDIDAPDPSGPIVPWTHWVVVNIPPTLKGLPEGFSGKEEEIGGEY-AGIKEGNNDWKV 129
              V D DAP  SG    W HW VVNIP T+  LP   +G+ +  G +   G  +G ND+  
Sbjct:    70 TVYDPDAPTGSG----WWHWTVVNIPATVTYLPVD-AGRRD--GTKLPTGAVQGRNDFGY 122

Query:   130 PGWRG--PKLPNHGHRFQFKLYALDDE 154
              G+ G  P   +  H +QFK++AL  E
Sbjct:   123 AGFGGACPPKGDKPHHYQFKVWALKTE 149

GO:0030288 "outer membrane-bounded periplasmic space" evidence=IDA

GO:0043086 "negative regulation of catalytic activity" evidence=RCA

GO:0042597 "periplasmic space" evidence=IEA

GO:0004857 "enzyme inhibitor activity" evidence=RCA

UNIPROTKB|Q8EJZ0 ybcL "Phosphatidylethanolamine-binding protein YbcL" [Shewanella oneidensis MR-1 (taxid:211586)]

 Score = 193 (73.0 bits), Expect = 2.6e-15, P = 2.6e-15
 Identities = 53/168 (31%), Positives = 80/168 (47%)

Query:    20 ASEEFRLVSPEINHQGRLPRKYTNEGQGAK-KNISPRLEWYNVPEGTKSLALVVEDIDAP 78
             +++   L S +I     L  ++   G G   +NISP+L W + PEGTK+ A+   D DAP
Sbjct:    20 SAQAMTLSSKDIGEGQLLSNQFVFNGFGCTGENISPQLAWRDAPEGTKAYAVTAYDPDAP 79

Query:    79 DPSGPIVPWTHWVVVNIPPTLKGLPEGFSGKEEEIGGEYAGIKEGNNDWKVPGWRGPKLP 138
               SG    W HW V NI    + L +G   K   +      +K   ND+    + G   P
Sbjct:    80 TGSG----WWHWAVYNIGGDQQQLAQGAGSKHNGLPKGAIALK---NDFGTTDFGGACPP 132

Query:   139 N-HG-HRFQFKLYALDDEMHLGNKVTKERLLEAIEGHVLGEAVLTAIF 184
               HG HR++F ++AL + + L    +   L   +    LG A LTA++
Sbjct:   133 QGHGMHRYEFTVWALPNPLELPKDASPALLGFMLRAQALGSAKLTAVY 180

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|SO_0316 SO_0316 "conserved hypothetical protein TIGR00481" [Shewanella oneidensis MR-1 (taxid:211586)]

 Score = 193 (73.0 bits), Expect = 2.6e-15, P = 2.6e-15
 Identities = 53/168 (31%), Positives = 80/168 (47%)

Query:    20 ASEEFRLVSPEINHQGRLPRKYTNEGQGAK-KNISPRLEWYNVPEGTKSLALVVEDIDAP 78
             +++   L S +I     L  ++   G G   +NISP+L W + PEGTK+ A+   D DAP
Sbjct:    20 SAQAMTLSSKDIGEGQLLSNQFVFNGFGCTGENISPQLAWRDAPEGTKAYAVTAYDPDAP 79

Query:    79 DPSGPIVPWTHWVVVNIPPTLKGLPEGFSGKEEEIGGEYAGIKEGNNDWKVPGWRGPKLP 138
               SG    W HW V NI    + L +G   K   +      +K   ND+    + G   P
Sbjct:    80 TGSG----WWHWAVYNIGGDQQQLAQGAGSKHNGLPKGAIALK---NDFGTTDFGGACPP 132

Query:   139 N-HG-HRFQFKLYALDDEMHLGNKVTKERLLEAIEGHVLGEAVLTAIF 184
               HG HR++F ++AL + + L    +   L   +    LG A LTA++
Sbjct:   133 QGHGMHRYEFTVWALPNPLELPKDASPALLGFMLRAQALGSAKLTAVY 180

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

UNIPROTKB|Q47ZM4 CPS_3047 "Putative uncharacterized protein" [Colwellia psychrerythraea 34H (taxid:167879)]

 Score = 186 (70.5 bits), Expect = 1.4e-14, P = 1.4e-14
 Identities = 54/173 (31%), Positives = 80/173 (46%)

Query:    16 SIAMASEEFRLVSPEINHQGRLPRKYTNEGQGAKK-NISPRLEWYNVPEGTKSLALVVED 74
             S  + S    L S +I     +P+     G G    + SP L+W N P+GTKS A+   D
Sbjct:    16 STHLFSASLTLSSEDIAQGEFMPKAQEYNGFGCSGGDFSPHLKWSNAPKGTKSYAITAYD 75

Query:    75 IDAPDPSGPIVPWTHWVVVNIPPTLKGLPEGFSGKEEEIGGEYAGIKEGNNDWKVPGWRG 134
              DAP  SG    W HW VVNIP T+  +    +G  +       G K+  ND+   G+ G
Sbjct:    76 ADAPTGSG----WWHWQVVNIPITVMEISTD-AGNTKTNSAP-TGSKQIQNDFGSRGFGG 129

Query:   135 PKLPN-HG-HRFQFKLYALD-DEMHLGNKVTKERLLEAIEGHVLGEAVLTAIF 184
                P  HG H ++F +YAL  D++ L    +       I  H +  + + A++
Sbjct:   130 ACPPKGHGVHHYRFTVYALSVDKLELSADASGALAGYMINAHTIESSTIEALY 182

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O58984	Y1269_PYRHO	No assigned EC number	0.3315	0.9347	0.8686	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSVIVG00001324001	SubName- Full=Chromosome chr8 scaffold_115, whole genome shotgun sequence; (166 aa)
		(Vitis vinifera)
Predicted Functional Partners:
	GSVIVG00026365001	SubName- Full=Chromosome chr15 scaffold_37, whole genome shotgun sequence; (363 aa)							•		0.526
	GSVIVG00003725001	SubName- Full=Chromosome chr13 scaffold_149, whole genome shotgun sequence; (326 aa)							•		0.506
	GSVIVG00014587001	SubName- Full=Chromosome chr18 scaffold_1, whole genome shotgun sequence; (261 aa)							•		0.443
	MFT	SubName- Full=Chromosome undetermined scaffold_434, whole genome shotgun sequence (Chromosome u [...] (175 aa)			•						0.418
	GSVIVG00013086001	SubName- Full=Chromosome undetermined scaffold_434, whole genome shotgun sequence (Chromosome u [...] (175 aa)			•						0.418

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	184
cd00865	150	cd00865, PEBP_bact_arch, PhosphatidylEthanolamine-	1e-53
COG1881	174	COG1881, COG1881, Phospholipid-binding protein [Ge	3e-45
pfam01161	147	pfam01161, PBP, Phosphatidylethanolamine-binding p	9e-33
TIGR00481	141	TIGR00481, TIGR00481, Raf kinase inhibitor-like pr	1e-31
cd00457	159	cd00457, PEBP, PhosphatidylEthanolamine-Binding Pr	4e-28
PRK10257	158	PRK10257, PRK10257, putative kinase inhibitor prot	1e-25
PRK09818	183	PRK09818, PRK09818, putative kinase inhibitor; Pro	2e-21
cd00866	154	cd00866, PEBP_euk, PhosphatidylEthanolamine-Bindin	3e-05

>gnl|CDD|176643 cd00865, PEBP_bact_arch, PhosphatidylEthanolamine-Binding Protein (PEBP) domain present in bacteria and archaea

 Score =  167 bits (425), Expect = 1e-53
 Identities = 69/161 (42%), Positives = 87/161 (54%), Gaps = 12/161 (7%)

Query: 25  RLVSPEINHQGRLPRKYTNEGQGAKKNISPRLEWYNVPEGTKSLALVVEDIDAPDPSGPI 84
           +L SP     G +P+KY     G   N+SP L W  VP GTKSLAL+VED DAP      
Sbjct: 1   KLTSPAFFDGGPIPKKYAFTCDGE--NVSPPLSWSGVPAGTKSLALIVEDPDAPTGG--- 55

Query: 85  VPWTHWVVVNIPPTLKGLPEGFSGKEEEIGGEYAGIKEGNNDWKVPGWRGPKLPNHG-HR 143
             + HWVV NIP     LPEG S          AG  +G ND+   G+ GP  P+ G HR
Sbjct: 56  -GFVHWVVWNIPADTTELPEGASRGALP-----AGAVQGRNDFGEAGYGGPCPPDGGPHR 109

Query: 144 FQFKLYALDDEMHLGNKVTKERLLEAIEGHVLGEAVLTAIF 184
           + F +YALD  + L    T+  LL A++GHVL +A LT  +
Sbjct: 110 YVFTVYALDVPLLLPPGATRAELLFAMKGHVLAKAELTGTY 150

PhosphatidylEthanolamine-Binding Proteins (PEBPs) are represented in all three major phylogenetic divisions (eukaryotes, bacteria, archaea). The members in this subgroup are present in bacterial and archaea. Members here include Escherichia coli YBHB and YBCL which are thought to regulate protein phosphorylation as well as Sulfolobus solfataricus SsCEI which inhibits serine proteases alpha-chymotrypsin and elastase. Although their overall structures are similar, the members of the PEBP family have very different substrates and oligomerization states (monomer/dimer/tetramer). In a few of the bacterial members present here the dimerization interface is proposed to form the ligand binding site, unlike in other PEBP members. Length = 150

>gnl|CDD|224793 COG1881, COG1881, Phospholipid-binding protein [General function prediction only]

 Score =  146 bits (371), Expect = 3e-45
 Identities = 69/163 (42%), Positives = 87/163 (53%), Gaps = 16/163 (9%)

Query: 24  FRLVSPEINHQGRLPRKYTNEGQGAKKNISPRLEWYNVPEGTKSLALVVEDIDAPDPSGP 83
             L+S        +P +YT  G     NISP L W  VPEGTKS AL V+D DAP   G 
Sbjct: 23  MGLISNAFADGAPIPDEYTCGGP----NISPPLSWSGVPEGTKSFALTVDDPDAPTGGG- 77

Query: 84  IVPWTHWVVVNIPPTLKGLPEGFSGKEEEIGGEYAGIKEGNNDWKVPGWRGPKLPN-HGH 142
              W HWVV NIP  +  LPEG   K +       GI +G ND+   G+ GP  P  HGH
Sbjct: 78  ---WVHWVVANIPADVTELPEGSGPKSK------IGIVQGINDFGSRGYGGPCPPKGHGH 128

Query: 143 RFQFKLYALDDE-MHLGNKVTKERLLEAIEGHVLGEAVLTAIF 184
           R+ F +YALD E + L    +   L +A+EGH+L +A LT  +
Sbjct: 129 RYYFTVYALDVELLLLPAGASGAELGKAMEGHILAQAELTGTY 171

Length = 174

>gnl|CDD|216338 pfam01161, PBP, Phosphatidylethanolamine-binding protein

 Score =  114 bits (286), Expect = 9e-33
 Identities = 63/159 (39%), Positives = 80/159 (50%), Gaps = 22/159 (13%)

Query: 34  QGRLPRKYTNEGQGAKKNISPRLEWYNVPE---GTKSLALVVEDIDAPDPSGPI-VPWTH 89
            G LP +YT        N+SP L W + P    GTKS ALV+ D DAP  S P    + H
Sbjct: 1   GGPLPVEYTGAFVCPGNNLSPPLSWSDAPTISDGTKSYALVMVDPDAPSRSDPKGSEFLH 60

Query: 90  WVVVNIPPTLKGLPEGFSGKEEEIGGEYAGIKEGNND--WKVPGWRGP-KLPNHG-HRFQ 145
           W+V NIP ++  LP G                +G ND    + G+ GP   P  G HR+ 
Sbjct: 61  WLVTNIPASVTELPGGG--------------VQGVNDFGQTLAGYIGPCPPPGTGPHRYV 106

Query: 146 FKLYALDDEMHLGNKVTKERLLEAIEGHVLGEAVLTAIF 184
           F LYALD+++ L   VT+  L EA +GHVLG A L   F
Sbjct: 107 FLLYALDEKLDLPAGVTRAELREAFKGHVLGPATLAGNF 145

Length = 147

>gnl|CDD|129572 TIGR00481, TIGR00481, Raf kinase inhibitor-like protein, YbhB/YbcL family

 Score =  110 bits (277), Expect = 1e-31
 Identities = 56/135 (41%), Positives = 72/135 (53%), Gaps = 7/135 (5%)

Query: 51  NISPRLEWYNVPEGTKSLALVVEDIDAPDPSGPIVPWTHWVVVNIPPTLKGLPEGFSGKE 110
           NISP L W  VPEG KSLAL   D DAP        W HWVVVNIP     LPE  S  +
Sbjct: 13  NISPPLSWDGVPEGAKSLALTCIDPDAP----TGCGWWHWVVVNIPADTTVLPENASSDD 68

Query: 111 EEIGGEYAGIKEGNNDWKVPGWRGPKLPNHGHRFQFKLYALDDE-MHLGNKVTKERLLEA 169
           + +        +G ND+   G+ GP  P   HR+ F +YALD E + L    +   L +A
Sbjct: 69  KRL--PQGVPLQGRNDFGKSGYIGPCPPKGDHRYLFTVYALDTEKLDLDPGFSLADLGDA 126

Query: 170 IEGHVLGEAVLTAIF 184
           +EGH+L EA +  ++
Sbjct: 127 MEGHILAEASIEGLY 141

[Unknown function, General]. Length = 141

>gnl|CDD|176642 cd00457, PEBP, PhosphatidylEthanolamine-Binding Protein (PEBP) domain

 Score =  102 bits (256), Expect = 4e-28
 Identities = 54/161 (33%), Positives = 67/161 (41%), Gaps = 22/161 (13%)

Query: 26  LVSPEINHQG-RLPRKYTNEGQGAKKNISPRLEWYNVPEGTKSLALVVEDIDAPDPSGPI 84
           L SPE+   G  LP +Y+ EG        P L W   P   K   LV+ED DAP      
Sbjct: 2   LESPEVGPSGSVLPPEYSFEG----VGRFPSLSWDGPPPDVKEYVLVMEDPDAPLGR--- 54

Query: 85  VPWTHWVVVNIPPTLKGLPEGFSGKEEEI-----GGEYAGIKEGNNDWKVPGWRGPKLPN 139
            P  H +V  IP     L        +       GG   G   G   +  P  R P    
Sbjct: 55  -PIVHGLVYGIPANKTSLSNDDFVVTDNGKGGLQGGFKYGKNRGGTVYIGP--RPPL--G 109

Query: 140 HG-HRFQFKLYALD---DEMHLGNKVTKERLLEAIEGHVLG 176
           HG HR+ F++YALD   D   LG+  TK  +    EG+VLG
Sbjct: 110 HGPHRYFFQVYALDEPLDRSKLGDGRTKFEVARFAEGNVLG 150

PhosphatidylEthanolamine-Binding Proteins (PEBPs) are represented in all three major phylogenetic divisions (eukaryotes, bacteria, archaea). A number of biological roles for members of the PEBP family include serine protease inhibition, membrane biogenesis, regulation of flowering plant stem architecture, and Raf-1 kinase inhibition. Although their overall structures are similar, the members of the PEBP family bind very different substrates including phospholipids, opioids, and hydrophobic odorant molecules as well as having different oligomerization states (monomer/dimer/tetramer). Length = 159

>gnl|CDD|182339 PRK10257, PRK10257, putative kinase inhibitor protein; Provisional

 Score = 96.0 bits (239), Expect = 1e-25
 Identities = 55/165 (33%), Positives = 82/165 (49%), Gaps = 12/165 (7%)

Query: 24  FRLVSPEINHQGRLPRKYTNEGQGAK-KNISPRLEWYNVPEGTKSLALVVEDIDAPDPSG 82
            +L+S ++    +LP ++   G G    NISP L W +VP GTKS  +   D DAP  SG
Sbjct: 1   MKLISNDLRDGDKLPHRHVFNGMGYDGDNISPHLAWDDVPAGTKSFVVTCYDPDAPTGSG 60

Query: 83  PIVPWTHWVVVNIPPTLKGLPEGF-SGKEEEIGGEYAGIKEGNNDWKVPGWRGPKLP-NH 140
               W HWVVVN+P   + LP+GF SG          G+ +   D+   G+ G   P   
Sbjct: 61  ----WWHWVVVNLPADTRVLPQGFGSGLVALP----DGVLQTRTDFGKAGYGGAAPPKGE 112

Query: 141 GHRFQFKLYALD-DEMHLGNKVTKERLLEAIEGHVLGEAVLTAIF 184
            HR+ F ++ALD + + +    +   +   +  H L  A +TA+F
Sbjct: 113 THRYIFTVHALDVERIDVDEGASGAMVGFNVHFHSLASASITAMF 157

Length = 158

>gnl|CDD|182092 PRK09818, PRK09818, putative kinase inhibitor; Provisional

 Score = 86.2 bits (213), Expect = 2e-21
 Identities = 54/177 (30%), Positives = 87/177 (49%), Gaps = 10/177 (5%)

Query: 12  IAQASIAMASEEFRLVSPEINHQGRLPRKYTNEGQGAKK-NISPRLEWYNVPEGTKSLAL 70
           +A  + +  +  F++ S EI    +L   +   G G +  N SP L W   PEGTKS A+
Sbjct: 10  LAFITFSAQAAAFQVTSNEIKTGEQLTTSHVFSGFGCEGGNTSPSLTWSGAPEGTKSFAV 69

Query: 71  VVEDIDAPDPSGPIVPWTHWVVVNIPPTLKGLPEGFSGKEEEIGGEYAGIKEGNNDWKVP 130
            V D DAP  SG    W HW V NIP T+  LP   +G+ +       G  +G ND+   
Sbjct: 70  TVYDPDAPTGSG----WWHWTVANIPATVTYLPAD-AGRRDGTKLP-TGAVQGRNDFGYA 123

Query: 131 GWRG--PKLPNHGHRFQFKLYALD-DEMHLGNKVTKERLLEAIEGHVLGEAVLTAIF 184
           G+ G  P   +  H +QFK++AL  D++ + +  +   +   +  + +  A +T ++
Sbjct: 124 GFGGACPPKGDKPHHYQFKVWALKTDKIPVDSNSSGALVGYMLNANKIATAEITPVY 180

Length = 183

>gnl|CDD|176644 cd00866, PEBP_euk, PhosphatidylEthanolamine-Binding Protein (PEBP) domain present in eukaryotes

 Score = 41.6 bits (98), Expect = 3e-05
 Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 1/46 (2%)

Query: 54 PRLEWYNVPEGTKSLALVVEDIDAPDPSGPI-VPWTHWVVVNIPPT 98
          P + + +     K   LV+ D DAP    P    W HW+V NIP +
Sbjct: 28 PTVSFSSEDPPDKLYTLVMVDPDAPSRDDPKFREWLHWLVTNIPGS 73

PhosphatidylEthanolamine-Binding Proteins (PEBPs) are represented in all three major phylogenetic divisions (eukaryotes, bacteria, archaea). The members in this subgroup are present in eukaryotes. Members here include those in plants such as Arabidopsis thaliana FLOWERING LOCUS (FT) and TERMINAL FLOWER1 (FT1) which function as a promoter and a repressor of the floral transitions, respectively as well as the mammalian Raf kinase inhibitory protein (RKIP) which inhibits MAP kinase (Raf-MEK-ERK), G protein-coupled receptor (GPCR) kinase and NFkappaB signaling cascades. Although their overall structures are similar, the members of the PEBP family have very different substrates and oligomerization states (monomer/dimer/tetramer). Length = 154

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	184
PRK10257	158	putative kinase inhibitor protein; Provisional	100.0
PRK09818	183	putative kinase inhibitor; Provisional	100.0
COG1881	174	Phospholipid-binding protein [General function pre	100.0
cd00865	150	PEBP_bact_arch PhosphatidylEthanolamine-Binding Pr	100.0
TIGR00481	141	Raf kinase inhibitor-like protein, YbhB/YbcL famil	100.0
cd00457	159	PEBP PhosphatidylEthanolamine-Binding Protein (PEB	100.0
PF01161	146	PBP: Phosphatidylethanolamine-binding protein; Int	100.0
cd00866	154	PEBP_euk PhosphatidylEthanolamine-Binding Protein	99.87
PLN00169	175	CETS family protein; Provisional	99.86
KOG3346	185	consensus Phosphatidylethanolamine binding protein	99.83

>PRK10257 putative kinase inhibitor protein; Provisional

Probab=100.00  E-value=4.2e-52  Score=327.32  Aligned_cols=154  Identities=34%  Similarity=0.610  Sum_probs=140.6

Q ss_pred             cEEEcCCCCCCCCCCcccccCCCCC-CCCCcCeeEeccCCCCceEEEEEEecCCCCCCCCCCcceEEEEEEccCCCCCCC
Q 029999           24 FRLVSPEINHQGRLPRKYTNEGQGA-KKNISPRLEWYNVPEGTKSLALVVEDIDAPDPSGPIVPWTHWVVVNIPPTLKGL  102 (184)
Q Consensus        24 ~~l~S~~f~~g~~lp~~~t~~g~g~-~~n~sP~l~w~~~P~~tks~alim~DpDaP~~~~p~~~~~HW~v~nIp~~~~~l  102 (184)
                      |+|+|++|++|+.||.+|+|.+.+| |+|+||+|+|+++|++||||+|+|+|||||.+.    .|+||++||||+++++|
T Consensus         1 ~~ltS~~f~~g~~ip~~~~~~~~~~~G~n~SP~L~w~~~P~~t~s~ali~~DpDap~~~----~~~HWvv~nIP~~~~~l   76 (158)
T PRK10257          1 MKLISNDLRDGDKLPHRHVFNGMGYDGDNISPHLAWDDVPAGTKSFVVTCYDPDAPTGS----GWWHWVVVNLPADTRVL   76 (158)
T ss_pred             CEEeccCccCcCCCCHHHcccccCCCCCCCCceEEEcCCCCCceEEEEEEECCCCCCCC----cEEEEEEEcCCCCcccc
Confidence            7899999999999999999977665 689999999999999999999999999998753    59999999999999999


Q ss_pred             CCCCCCCcccccCcccCeeeecCCCCCCCccCCCCCCC-CceEEEEEEeeC-CcCCCCCcccHHHHHHHHhcCeeEEEEE
Q 029999          103 PEGFSGKEEEIGGEYAGIKEGNNDWKVPGWRGPKLPNH-GHRFQFKLYALD-DEMHLGNKVTKERLLEAIEGHVLGEAVL  180 (184)
Q Consensus       103 ~~g~~~~~~~~~~~~~g~~~g~n~~g~~~Y~GP~Pp~g-~HrY~f~vyAl~-~~l~l~~~~~~~~l~~a~~~hvl~~~~l  180 (184)
                      +||+.....   ..+.+++||.|+++..+|.|||||.| .|||+|+||||| ++|+|+++++++++.++|+||||++|+|
T Consensus        77 ~eg~~~~~~---~~p~g~~~g~n~~g~~gY~GP~PP~g~~HrY~f~vyALd~~~L~l~~~~~~~~l~~a~~ghvla~a~l  153 (158)
T PRK10257         77 PQGFGSGLV---ALPDGVLQTRTDFGKAGYGGAAPPKGETHRYIFTVHALDVERIDVDEGASGAMVGFNVHFHSLASASI  153 (158)
T ss_pred             cCCCCcccc---cCCCCceeccccCCCccCcCCCCccCCCceEEEEEEEecCcccCCCCCCCHHHHHHHHhhceEEEEEE
Confidence            999865321   23457899999999999999999988 799999999999 6899999999999999999999999999


Q ss_pred             EEEC
Q 029999          181 TAIF  184 (184)
Q Consensus       181 ~g~y  184 (184)
                      +|+|
T Consensus       154 ~g~y  157 (158)
T PRK10257        154 TAMF  157 (158)
T ss_pred             EEEE
Confidence            9998

>PRK09818 putative kinase inhibitor; Provisional

Probab=100.00  E-value=3.2e-50  Score=323.12  Aligned_cols=163  Identities=31%  Similarity=0.545  Sum_probs=142.2

Q ss_pred             hhhccCCccEEEcCCCCCCCCCCcccccCCCCC-CCCCcCeeEeccCCCCceEEEEEEecCCCCCCCCCCcceEEEEEEc
Q 029999           16 SIAMASEEFRLVSPEINHQGRLPRKYTNEGQGA-KKNISPRLEWYNVPEGTKSLALVVEDIDAPDPSGPIVPWTHWVVVN   94 (184)
Q Consensus        16 ~~~~~~~~~~l~S~~f~~g~~lp~~~t~~g~g~-~~n~sP~l~w~~~P~~tks~alim~DpDaP~~~~p~~~~~HW~v~n   94 (184)
                      -|+...++|+|+|++|.+|+.||.+|++.+.+| |+|+||+|+|+++|++||||||+|+|||||.+.    +|+||++||
T Consensus        14 ~~~~~~~~~~ltS~~f~~G~~ip~~~~~~~~~~~G~n~SP~L~W~~~P~gtks~aLi~~DpDaP~g~----~~~HWvv~n   89 (183)
T PRK09818         14 TFSAQAAAFQVTSNEIKTGEQLTTSHVFSGFGCEGGNTSPSLTWSGAPEGTKSFAVTVYDPDAPTGS----GWWHWTVAN   89 (183)
T ss_pred             hhhccCCcEEEECcCccCcCCCCHHHcccccCCCCCCcceeEEEccCCCCcEEEEEEEECCCCCCCC----cEEEEEEEc
Confidence            345556789999999999999999875543333 479999999999999999999999999998753    599999999


Q ss_pred             cCCCCCCCCCCCCCCcccccCcccCeeeecCCCCCCCccCCCCCCC--CceEEEEEEeeC-CcCCCCCcccHHHHHHHHh
Q 029999           95 IPPTLKGLPEGFSGKEEEIGGEYAGIKEGNNDWKVPGWRGPKLPNH--GHRFQFKLYALD-DEMHLGNKVTKERLLEAIE  171 (184)
Q Consensus        95 Ip~~~~~l~~g~~~~~~~~~~~~~g~~~g~n~~g~~~Y~GP~Pp~g--~HrY~f~vyAl~-~~l~l~~~~~~~~l~~a~~  171 (184)
                      ||++.++|++|.......  ..+.+.+||.|+++..+|.|||||.|  .|||+|+||||| ++|+|+++++++++.++|+
T Consensus        90 IP~~~~~l~eg~~~~~~~--~~~~g~~~g~N~~g~~gY~GP~PP~G~g~HrY~F~vyALd~~~l~l~~~~~~~~l~~~~~  167 (183)
T PRK09818         90 IPATVTYLPADAGRRDGT--KLPTGAVQGRNDFGYAGFGGACPPKGDKPHHYQFKVWALKTDKIPVDSNSSGALVGYMLN  167 (183)
T ss_pred             CCCCccccCCCCcccccc--cCCCCCEEeecCCCCCceECCCCccCCCCEEEEEEEEEecCcccCCCCCCCHHHHHHHHh
Confidence            999999999998653210  12457899999999999999999987  699999999999 6799999999999999999


Q ss_pred             cCeeEEEEEEEEC
Q 029999          172 GHVLGEAVLTAIF  184 (184)
Q Consensus       172 ~hvl~~~~l~g~y  184 (184)
                      ||+|++|+|+|+|
T Consensus       168 ghvLa~a~l~g~y  180 (183)
T PRK09818        168 ANKIATAEITPVY  180 (183)
T ss_pred             hceEEEEEEEEEE
Confidence            9999999999998

>COG1881 Phospholipid-binding protein [General function prediction only]

Probab=100.00  E-value=5e-47  Score=302.21  Aligned_cols=150  Identities=43%  Similarity=0.735  Sum_probs=136.1

Q ss_pred             CCccEEEcCCCCCCCCCCcccccCCCCCCCCCcCeeEeccCCCCceEEEEEEecCCCCCCCCCCcceEEEEEEccCCCCC
Q 029999           21 SEEFRLVSPEINHQGRLPRKYTNEGQGAKKNISPRLEWYNVPEGTKSLALVVEDIDAPDPSGPIVPWTHWVVVNIPPTLK  100 (184)
Q Consensus        21 ~~~~~l~S~~f~~g~~lp~~~t~~g~g~~~n~sP~l~w~~~P~~tks~alim~DpDaP~~~~p~~~~~HW~v~nIp~~~~  100 (184)
                      ...|.++|.+|.+|+.||.+|+|+|    .|+||+|+|+++|++||||||+|+|||||...    .|+||+|+|||++.+
T Consensus        20 ~~~~~~~s~~f~~g~~ip~~~t~~g----~~~sPpl~ws~~P~~tkS~AL~v~DpDAP~g~----~~~HWvv~nIp~~~~   91 (174)
T COG1881          20 LAVMGLISNAFADGAPIPDEYTCGG----PNISPPLSWSGVPEGTKSFALTVDDPDAPTGG----GWVHWVVANIPADVT   91 (174)
T ss_pred             cccccccchhhhCCCccchhhhcCC----CCcCCceeecCCCCCCeeEEEEEECCCCCCCC----cEEEEEEEccCCccc
Confidence            3468999999999999999999977    59999999999999999999999999999743    699999999999888


Q ss_pred             CCCCCCCCCcccccCcccCeeeecCCCCCCCccCCCCCCCC-ceEEEEEEeeCC-cCCCCCcccHHHHHHHHhcCeeEEE
Q 029999          101 GLPEGFSGKEEEIGGEYAGIKEGNNDWKVPGWRGPKLPNHG-HRFQFKLYALDD-EMHLGNKVTKERLLEAIEGHVLGEA  178 (184)
Q Consensus       101 ~l~~g~~~~~~~~~~~~~g~~~g~n~~g~~~Y~GP~Pp~g~-HrY~f~vyAl~~-~l~l~~~~~~~~l~~a~~~hvl~~~  178 (184)
                      +++++......      .+.+||.|+++..+|.|||||.|. |||+|+|||||. .+.+++++++++|.++|++|+|+++
T Consensus        92 ~~~~~~~~~~~------~~~~qg~Nd~g~~~Y~Gp~PP~g~~HrY~f~vyALd~~~~~~~~g~~~~~~~~~~~~hil~~a  165 (174)
T COG1881          92 ELPEGSGPKSK------IGIVQGINDFGSRGYGGPCPPKGHGHRYYFTVYALDVELLLLPAGASGAELGKAMEGHILAQA  165 (174)
T ss_pred             ccccccccccc------cceEEeeccccccCcccCCCCCCCCeEEEEEEEEcccccccCCCCCCHHHHHHHHHHHHHHHh
Confidence            99988643211      468999999999999999999997 999999999995 6778899999999999999999999


Q ss_pred             EEEEEC
Q 029999          179 VLTAIF  184 (184)
Q Consensus       179 ~l~g~y  184 (184)
                      +++|+|
T Consensus       166 ~~~g~y  171 (174)
T COG1881         166 ELTGTY  171 (174)
T ss_pred             hhheeE
Confidence            999998

>cd00865 PEBP_bact_arch PhosphatidylEthanolamine-Binding Protein (PEBP) domain present in bacteria and archaea

Probab=100.00  E-value=4.3e-45  Score=285.19  Aligned_cols=147  Identities=47%  Similarity=0.770  Sum_probs=133.8

Q ss_pred             EEEcCCCCCCCCCCccc--ccCCCCCCCCCcCeeEeccCCCCceEEEEEEecCCCCCCCCCCcceEEEEEEccCCCCCCC
Q 029999           25 RLVSPEINHQGRLPRKY--TNEGQGAKKNISPRLEWYNVPEGTKSLALVVEDIDAPDPSGPIVPWTHWVVVNIPPTLKGL  102 (184)
Q Consensus        25 ~l~S~~f~~g~~lp~~~--t~~g~g~~~n~sP~l~w~~~P~~tks~alim~DpDaP~~~~p~~~~~HW~v~nIp~~~~~l  102 (184)
                      +|+|+.|.+|+.||.+|  +|+|    +|+||+|+|+++|++||||+|+|+|+|+|..    .+|+||++||||+++++|
T Consensus         1 ~~~s~~~~~g~~~p~~~~~~~~g----~~~SP~l~w~~~p~~t~s~al~m~D~Dap~~----~~~~HW~~~nIp~~~~~i   72 (150)
T cd00865           1 KLTSPAFFDGGPIPKKYAFTCDG----ENVSPPLSWSGVPAGTKSLALIVEDPDAPTG----GGFVHWVVWNIPADTTEL   72 (150)
T ss_pred             CeecccccCcCCCChhhcccCCC----CCcCCCeEEcCCCCCCeEEEEEEEcCCCCCC----CCEEEEEEeccCcccccc
Confidence            47899999999999999  8887    5899999999999999999999999999843    479999999999998899


Q ss_pred             CCCCCCCcccccCcccCeeeecCCCCCCCccCCCCCC-CCceEEEEEEeeCCcCCCCCcccHHHHHHHHhcCeeEEEEEE
Q 029999          103 PEGFSGKEEEIGGEYAGIKEGNNDWKVPGWRGPKLPN-HGHRFQFKLYALDDEMHLGNKVTKERLLEAIEGHVLGEAVLT  181 (184)
Q Consensus       103 ~~g~~~~~~~~~~~~~g~~~g~n~~g~~~Y~GP~Pp~-g~HrY~f~vyAl~~~l~l~~~~~~~~l~~a~~~hvl~~~~l~  181 (184)
                      ++|....     ....+++||.|+++..+|.|||||. +.|||+|+||||+.++.+++++++++|+++|++|+|++|+|+
T Consensus        73 ~~g~~~~-----~~~~~~~~g~n~~~~~~Y~gP~Pp~~~~HrY~f~vyAld~~l~~~~~~~~~~l~~ai~~hvla~~~l~  147 (150)
T cd00865          73 PEGASRG-----ALPAGAVQGRNDFGEAGYGGPCPPDGGPHRYVFTVYALDVPLLLPPGATRAELLFAMKGHVLAKAELT  147 (150)
T ss_pred             cCCcccc-----cCCCCCeEeecCCCCCeecCCCCcCCCceEEEEEEEEeCCccCCCCCCCHHHHHHHHhhceeEEEEEE
Confidence            9987532     1234689999999999999999998 589999999999999999999999999999999999999999


Q ss_pred             EEC
Q 029999          182 AIF  184 (184)
Q Consensus       182 g~y  184 (184)
                      |+|
T Consensus       148 ~~y  150 (150)
T cd00865         148 GTY  150 (150)
T ss_pred             EEC
Confidence            998

PhosphatidylEthanolamine-Binding Proteins (PEBPs) are represented in all three major phylogenetic divisions (eukaryotes, bacteria, archaea). The members in this subgroup are present in bacterial and archaea. Members here include Escherichia coli YBHB and YBCL which are thought to regulate protein phosphorylation as well as Sulfolobus solfataricus SsCEI which inhibits serine proteases alpha-chymotrypsin and elastase. Although their overall structures are similar, the members of the PEBP family have very different substrates and oligomerization states (monomer/dimer/tetramer). In a few of the bacterial members present here the dimerization interface is proposed to form the ligand binding site, unlike in other PEBP members.

>TIGR00481 Raf kinase inhibitor-like protein, YbhB/YbcL family

Probab=100.00  E-value=2.9e-44  Score=278.29  Aligned_cols=128  Identities=45%  Similarity=0.750  Sum_probs=115.8

Q ss_pred             CCCcCeeEeccCCCCceEEEEEEecCCCCCCCCCCcceEEEEEEccCCCCCCCCCCCCCCcccccCcccC-eeeecCCCC
Q 029999           50 KNISPRLEWYNVPEGTKSLALVVEDIDAPDPSGPIVPWTHWVVVNIPPTLKGLPEGFSGKEEEIGGEYAG-IKEGNNDWK  128 (184)
Q Consensus        50 ~n~sP~l~w~~~P~~tks~alim~DpDaP~~~~p~~~~~HW~v~nIp~~~~~l~~g~~~~~~~~~~~~~g-~~~g~n~~g  128 (184)
                      +|+||+|+|+++|++||||+|+|+|+|||...    .|+||++||||+++++|++|+.....   ..+.+ .+||.|+++
T Consensus        12 ~n~SP~l~w~~~P~~t~s~al~~~D~Dap~~~----~~~HWv~~nIp~~~~~l~e~~~~~~~---~~~~g~~~~g~n~~g   84 (141)
T TIGR00481        12 PNISPPLSWDGVPEGAKSLALTCIDPDAPTGC----GWWHWVVVNIPADTTVLPENASSDDK---RLPQGVPLQGRNDFG   84 (141)
T ss_pred             CCCCcEEEEcCCCCCceEEEEEEECCCCCCCC----CeEEEEEecCCCCcccccCCcccccc---ccCCcceeEeeccCC
Confidence            69999999999999999999999999998764    49999999999999999999763221   11335 689999999


Q ss_pred             CCCccCCCCCCCCceEEEEEEeeCCc-CCCCCcccHHHHHHHHhcCeeEEEEEEEEC
Q 029999          129 VPGWRGPKLPNHGHRFQFKLYALDDE-MHLGNKVTKERLLEAIEGHVLGEAVLTAIF  184 (184)
Q Consensus       129 ~~~Y~GP~Pp~g~HrY~f~vyAl~~~-l~l~~~~~~~~l~~a~~~hvl~~~~l~g~y  184 (184)
                      ..+|.|||||.|.|||+|+|||||.+ |+++++++++||+++|++|||++|+|+|+|
T Consensus        85 ~~~Y~GP~PP~g~HrY~f~vyALd~~~l~l~~~~~~~~l~~ai~ghvl~~~~l~g~y  141 (141)
T TIGR00481        85 KSGYIGPCPPKGDHRYLFTVYALDTEKLDLDPGFSLADLGDAMEGHILAEASIEGLY  141 (141)
T ss_pred             CccEeCCCCcCCCEEEEEEEEEecCCCCCCCCCCCHHHHHHHHhhCEEEEEEEEEEC
Confidence            99999999999999999999999976 999999999999999999999999999998

>cd00457 PEBP PhosphatidylEthanolamine-Binding Protein (PEBP) domain

Probab=100.00  E-value=5.1e-42  Score=270.40  Aligned_cols=148  Identities=31%  Similarity=0.436  Sum_probs=128.4

Q ss_pred             EEEcCCCCC-CCCCCcccccCCCCCCCCCcCeeEeccCCCCceEEEEEEecCCCCCCCCCCcceEEEEEEccCCCCCCCC
Q 029999           25 RLVSPEINH-QGRLPRKYTNEGQGAKKNISPRLEWYNVPEGTKSLALVVEDIDAPDPSGPIVPWTHWVVVNIPPTLKGLP  103 (184)
Q Consensus        25 ~l~S~~f~~-g~~lp~~~t~~g~g~~~n~sP~l~w~~~P~~tks~alim~DpDaP~~~~p~~~~~HW~v~nIp~~~~~l~  103 (184)
                      +|+|++|.+ |+.||.+|+|+|    .++||+|+|+++|++|++|+|+|+|+|||..    ++|+||++||||++.++++
T Consensus         1 ~l~s~~~~~~g~~lp~~~~~~g----~~~sP~l~w~~~p~~t~s~ali~~DpDap~~----~~~~HWvv~nIp~~~~~~~   72 (159)
T cd00457           1 TLESPEVGPSGSVLPPEYSFEG----VGRFPSLSWDGPPPDVKEYVLVMEDPDAPLG----RPIVHGLVYGIPANKTSLS   72 (159)
T ss_pred             CeecCCcCCCCCccChhhccCC----CCcCCceEecCCCCCCeEEEEEEECCCCCCC----CCceEEEEeccCccccccc
Confidence            479999999 999999999987    4899999999999999999999999999853    3799999999999988898


Q ss_pred             CCCCCCcccccCcccCeeeecCCC----CCCCccCCCCCCC--CceEEEEEEeeCCcCCCC---CcccHHHHHHHHhcCe
Q 029999          104 EGFSGKEEEIGGEYAGIKEGNNDW----KVPGWRGPKLPNH--GHRFQFKLYALDDEMHLG---NKVTKERLLEAIEGHV  174 (184)
Q Consensus       104 ~g~~~~~~~~~~~~~g~~~g~n~~----g~~~Y~GP~Pp~g--~HrY~f~vyAl~~~l~l~---~~~~~~~l~~a~~~hv  174 (184)
                      +|......    ...+..|+.|++    +..+|.|||||.|  .|||+|+||||++++.+.   ++.+++++.++|++|+
T Consensus        73 ~~~~~~~~----~~~~~~~~~n~~g~~~~~~~Y~GP~PP~G~g~HrY~f~lyald~~~~~~~~~~~~~~~~~~~~~~~~v  148 (159)
T cd00457          73 NDDFVVTD----NGKGGLQGGFKYGKNRGGTVYIGPRPPLGHGPHRYFFQVYALDEPLDRSKLGDGRTKFEVARFAEGNV  148 (159)
T ss_pred             ccccccCC----CCccceeccccccccCCCcCCcCCCCCCCCCCeeEEEEEEEecCccccccccCCCCHHHHHHHHHhCe
Confidence            87543211    123467888887    4679999999996  699999999999887754   6899999999999999


Q ss_pred             e-EEEEEEEEC
Q 029999          175 L-GEAVLTAIF  184 (184)
Q Consensus       175 l-~~~~l~g~y  184 (184)
                      | ++|+++++|
T Consensus       149 L~~~a~~~~~~  159 (159)
T cd00457         149 LGAVGEWVGQF  159 (159)
T ss_pred             eeEEEEEEEEC
Confidence            9 999999987

PhosphatidylEthanolamine-Binding Proteins (PEBPs) are represented in all three major phylogenetic divisions (eukaryotes, bacteria, archaea). A number of biological roles for members of the PEBP family include serine protease inhibition, membrane biogenesis, regulation of flowering plant stem architecture, and Raf-1 kinase inhibition. Although their overall structures are similar, the members of the PEBP family bind very different substrates including phospholipids, opioids, and hydrophobic odorant molecules as well as having different oligomerization states (monomer/dimer/tetramer).

>PF01161 PBP: Phosphatidylethanolamine-binding protein; InterPro: IPR008914 The PEBP (PhosphatidylEthanolamine-Binding Protein) family is a highly conserved group of proteins that have been identified in numerous tissues in a wide variety of organisms, including bacteria, yeast, nematodes, plants, drosophila and mammals

Probab=100.00  E-value=1.6e-34  Score=223.35  Aligned_cols=138  Identities=41%  Similarity=0.699  Sum_probs=113.3

Q ss_pred             CCCCCcccccCCCC-CCCCCcCeeEeccCCCCceEEEEEEecCCCCCCCCCC-cceEEEEEEccCCCCCCCCCCCCCCcc
Q 029999           34 QGRLPRKYTNEGQG-AKKNISPRLEWYNVPEGTKSLALVVEDIDAPDPSGPI-VPWTHWVVVNIPPTLKGLPEGFSGKEE  111 (184)
Q Consensus        34 g~~lp~~~t~~g~g-~~~n~sP~l~w~~~P~~tks~alim~DpDaP~~~~p~-~~~~HW~v~nIp~~~~~l~~g~~~~~~  111 (184)
                      ++.|+.+|++.... .|+++||+++|++.|.++++|+|+|+|+|+|.+..+. .+|+||+++||| + ++|++|..    
T Consensus         1 ~~~L~v~f~~~~~~~~G~~~sp~~~~~~~P~~~~~y~lim~D~D~P~~~~~~~~~~~Hwl~~ni~-~-~~~~~~~~----   74 (146)
T PF01161_consen    1 NGKLPVKFTGNKSVCPGNNVSPPLSWQNAPTGTKSYTLIMVDPDAPSRENPSFGPFLHWLVTNIP-S-TELPEGSD----   74 (146)
T ss_dssp             -CEEEEEECTTEECSTTEEEEGGGECSS-TCTTSEEEEEEEETTSSBTTSCTTTSEEEEEEEEEE-T-SEE-TTSS----
T ss_pred             CcCcCceeEcccccCCCCCCCcCcccccCCCCCcEEEEEEECCCCCccccCCCCcEEEEEEcCCC-C-ccCCCCCC----
Confidence            46799999822111 1368999999999999999999999999999866554 789999999999 6 78988862    


Q ss_pred             cccCcccCeeeecCCCCC--CCccCCCCCCC--CceEEEEEEeeCCcCCCCCcccHHHHHHHHhcCeeEEEEEEEEC
Q 029999          112 EIGGEYAGIKEGNNDWKV--PGWRGPKLPNH--GHRFQFKLYALDDEMHLGNKVTKERLLEAIEGHVLGEAVLTAIF  184 (184)
Q Consensus       112 ~~~~~~~g~~~g~n~~g~--~~Y~GP~Pp~g--~HrY~f~vyAl~~~l~l~~~~~~~~l~~a~~~hvl~~~~l~g~y  184 (184)
                             +.+++.|+.+.  ..|.|||||.|  .|||+|+||+|+++++++..+++.++.+++++|+|+.++|+|.|
T Consensus        75 -------~~~~~~~~~g~~~~~Y~~P~Pp~g~g~HrY~f~ly~q~~~~~l~~~~~~~~~~~~~~~~~L~~~~l~~~y  144 (146)
T PF01161_consen   75 -------GARQGINSSGQVIAPYLGPCPPKGSGPHRYVFLLYAQPSPLPLSDGATKFDLREAFKGHGLGPASLAGNY  144 (146)
T ss_dssp             -------TCETSBGGTSEEEES--SB-SSTTSSCEEEEEEEEEESSSSTSGBSSTHHTHHHHHHHTTEESEESEEEE
T ss_pred             -------ccEecccccCccccEEcCCcCcCcCCCceEEEEEEEcCCCCCCCCCCCHHHHHHHHHcCCCCCceEEEEE
Confidence                   34677888775  89999999975  79999999999998889889999999999999999999999987

The various functions described for members of this family include lipid binding, neuronal development [], serine protease inhibition [], the control of the morphological switch between shoot growth and flower structures [], and the regulation of several signalling pathways such as the MAP kinase pathway [], and the NF-kappaB pathway []. The control of the latter two pathways involves the PEBP protein RKIP, which interacts with MEK and Raf-1 to inhibit the MAP kinase pathway, and with TAK1, NIK, IKKalpha and IKKbeta to inhibit the NF-kappaB pathway. Other PEBP-like proteins that show strong structural homology to PEBP include Escherichia coli YBHB and YBCL, the Rattus norvegicus (Rat) neuropeptide HCNP, and Antirrhinum majus (Garden snapdragon) protein centroradialis (CEN). Structures have been determined for several members of the PEBP-like family, all of which show extensive fold conservation. The structure consists of a large central beta-sheet flanked by a smaller beta-sheet on one side, and an alpha helix on the other. Sequence alignments show two conserved central regions, CR1 and CR2, that form a consensus signature for the PEBP family. These two regions form part of the ligand-binding site, which can accommodate various anionic groups. The N- and C-terminal regions are the least conserved, and may be involved in interactions with different protein partners. The N-terminal residues 2-12 form the natural cleavage peptide HCNP involved in neuronal development. The C-terminal region is deleted in plant and bacterial PEBP homologues, and may help control accessibility to the active site. ; PDB: 1BD9_A 1BEH_A 2QYQ_A 2L7W_A 3AXY_A 2IQX_C 2IQY_A 1KN3_A 1FUX_A 1B7A_A ....

>cd00866 PEBP_euk PhosphatidylEthanolamine-Binding Protein (PEBP) domain present in eukaryotes

Probab=99.87  E-value=1.1e-21  Score=152.93  Aligned_cols=105  Identities=25%  Similarity=0.416  Sum_probs=82.3

Q ss_pred             CCCCCCCCCCcccccCCCCCCCCCcCeeEeccCCCCceEEEEEEecCCCCCCCCCC-cceEEEEEEccCCCCCCCCCCCC
Q 029999           29 PEINHQGRLPRKYTNEGQGAKKNISPRLEWYNVPEGTKSLALVVEDIDAPDPSGPI-VPWTHWVVVNIPPTLKGLPEGFS  107 (184)
Q Consensus        29 ~~f~~g~~lp~~~t~~g~g~~~n~sP~l~w~~~P~~tks~alim~DpDaP~~~~p~-~~~~HW~v~nIp~~~~~l~~g~~  107 (184)
                      ..+..|..|+.+.+        ..+|.|+|++.++++++|+|+|+|+|+|.+..+. .+|+||+++|||++...  .+. 
T Consensus        11 ~~v~~G~~l~~~~~--------~~~P~i~~~~~~~~~~~y~lvm~DpD~p~~~~~~~~~~lHwl~~ni~~~~~~--~~~-   79 (154)
T cd00866          11 GVVTPGNLLTPSET--------QKAPTVSFSSEDPPDKLYTLVMVDPDAPSRDDPKFREWLHWLVTNIPGSDTT--TGL-   79 (154)
T ss_pred             cCcCCCCCCCHHHh--------CcCCeEEEecCCCCCCeEEEEEECCCCCCCCCCCCCCEEEEEEeCcCCcccc--ccc-
Confidence            34566888877644        3589999999988899999999999999987666 78999999999987432  110 


Q ss_pred             CCcccccCcccCeeeecCCCCCCCccCCCCCCC--CceEEEEEEeeCCcCCCCC
Q 029999          108 GKEEEIGGEYAGIKEGNNDWKVPGWRGPKLPNH--GHRFQFKLYALDDEMHLGN  159 (184)
Q Consensus       108 ~~~~~~~~~~~g~~~g~n~~g~~~Y~GP~Pp~g--~HrY~f~vyAl~~~l~l~~  159 (184)
                                     ..+......|.||+||.|  .|||+|+||+|++.+.+..
T Consensus        80 ---------------~~~~~~~~~Y~~P~Pp~g~g~HRY~fll~~q~~~~~~~~  118 (154)
T cd00866          80 ---------------VSKGEVLVPYLGPGPPKGTGPHRYVFLLFKQPGGLDFPE  118 (154)
T ss_pred             ---------------cCCCCCcceeeCCCCCCCCCCccEEEEEEEeCCccCccc
Confidence                           112224689999999985  6999999999998776544

PhosphatidylEthanolamine-Binding Proteins (PEBPs) are represented in all three major phylogenetic divisions (eukaryotes, bacteria, archaea). The members in this subgroup are present in eukaryotes. Members here include those in plants such as Arabidopsis thaliana FLOWERING LOCUS (FT) and TERMINAL FLOWER1 (FT1) which function as a promoter and a repressor of the floral transitions, respectively as well as the mammalian Raf kinase inhibitory protein (RKIP) which inhibits MAP kinase (Raf-MEK-ERK), G protein-coupled receptor (GPCR) kinase and NFkappaB signaling cascades. Although their overall structures are similar, the members of the PEBP family have very different substrates and oligomerization states (monomer/dimer/tetramer).

>PLN00169 CETS family protein; Provisional

Probab=99.86  E-value=1.2e-20  Score=150.94  Aligned_cols=113  Identities=27%  Similarity=0.380  Sum_probs=85.6

Q ss_pred             EcCCCCCCCCCCcccccCCCCCCCCCcCeeEeccCCCCceEEEEEEecCCCCCCCCCC-cceEEEEEEccCCCCCCCCCC
Q 029999           27 VSPEINHQGRLPRKYTNEGQGAKKNISPRLEWYNVPEGTKSLALVVEDIDAPDPSGPI-VPWTHWVVVNIPPTLKGLPEG  105 (184)
Q Consensus        27 ~S~~f~~g~~lp~~~t~~g~g~~~n~sP~l~w~~~P~~tks~alim~DpDaP~~~~p~-~~~~HW~v~nIp~~~~~l~~g  105 (184)
                      .|..+..|..|+...++.        .|.|+|++. +..++|+|+|+|||||++.++. ++|+||+++|||++... .. 
T Consensus        33 ~s~~V~~G~~l~p~~t~~--------~P~i~~~~~-~~~~~ytlim~DpDaP~~~~~~~~~~~HW~v~nip~~~~~-~~-  101 (175)
T PLN00169         33 GSREVNNGCELKPSQVVN--------QPRVDIGGE-DLRTFYTLVMVDPDAPSPSNPNLREYLHWLVTDIPATTGA-TF-  101 (175)
T ss_pred             CCcCcCCcCCCCHHHhcc--------CCEEEEccC-CCCceeEEEEECCCCCCCCCCCcccEEEEEEeCCcccccc-cc-
Confidence            366788899998888754        499999875 3568999999999999988777 88999999999975310 00 


Q ss_pred             CCCCcccccCcccCeeeecCCCCCCCccCCCCCCCCceEEEEEEeeCCcCCCCC-----cccHHHHHHHH
Q 029999          106 FSGKEEEIGGEYAGIKEGNNDWKVPGWRGPKLPNHGHRFQFKLYALDDEMHLGN-----KVTKERLLEAI  170 (184)
Q Consensus       106 ~~~~~~~~~~~~~g~~~g~n~~g~~~Y~GP~Pp~g~HrY~f~vyAl~~~l~l~~-----~~~~~~l~~a~  170 (184)
                                       |.   ....|.||+||.|.|||+|+||+|..++.+..     .++.+++.+.-
T Consensus       102 -----------------g~---~~~~Y~~P~Pp~G~HRYvflly~Q~~~~~~~~~~~R~~F~~~~Fa~~~  151 (175)
T PLN00169        102 -----------------GQ---EVVCYESPRPTAGIHRFVFVLFRQLGRQTVYAPGWRQNFNTRDFAELY  151 (175)
T ss_pred             -----------------Cc---cceeecCCCCCCCceeEEEEEEEcCCCcccCCcccCCCcCHHHHHHHh
Confidence                             10   24689999999999999999999987665332     34555554443

>KOG3346 consensus Phosphatidylethanolamine binding protein [General function prediction only]

Probab=99.83  E-value=1.8e-20  Score=150.45  Aligned_cols=97  Identities=29%  Similarity=0.550  Sum_probs=75.9

Q ss_pred             CCCCCCCCcccccCCCCCCCCCcCeeEeccCCCCceEEEEEEecCCCCCCCCCC-cceEEEEEEccCCCCCCCCCCCCCC
Q 029999           31 INHQGRLPRKYTNEGQGAKKNISPRLEWYNVPEGTKSLALVVEDIDAPDPSGPI-VPWTHWVVVNIPPTLKGLPEGFSGK  109 (184)
Q Consensus        31 f~~g~~lp~~~t~~g~g~~~n~sP~l~w~~~P~~tks~alim~DpDaP~~~~p~-~~~~HW~v~nIp~~~~~l~~g~~~~  109 (184)
                      +..|..|+..-+.        ..|.++|.+....-..|+|+|+|||||++++|+ ++|+||+|.|||++.. +..|-   
T Consensus        37 v~~G~~l~pt~~~--------~~P~v~~~~~a~~~~~yTLvm~DPDaPsr~~p~~rE~lHWlV~nIPg~~~-~~~G~---  104 (185)
T KOG3346|consen   37 VENGNELTPTQVK--------NRPIVSWDGFADPGSLYTLVMTDPDAPSRSDPKFREWLHWLVTNIPGTDG-ISKGQ---  104 (185)
T ss_pred             ecCCCEeCchhhc--------cCCeEEEcCcCCCCCeEEEEEeCCCCCCCCCCcceeEEEEEEEeecCCcc-ccCCe---
Confidence            4567777664442        359999997533446799999999999999999 8999999999998642 22221   


Q ss_pred             cccccCcccCeeeecCCCCCCCccCCCCCCC--CceEEEEEEeeCCcCCC
Q 029999          110 EEEIGGEYAGIKEGNNDWKVPGWRGPKLPNH--GHRFQFKLYALDDEMHL  157 (184)
Q Consensus       110 ~~~~~~~~~g~~~g~n~~g~~~Y~GP~Pp~g--~HrY~f~vyAl~~~l~l  157 (184)
                                        ....|.||.||.|  .|||+|.||.|..+++.
T Consensus       105 ------------------~i~~Y~~P~Pp~~tG~HRyVfll~rQ~~~~~~  136 (185)
T KOG3346|consen  105 ------------------EISEYLGPGPPKGTGLHRYVFLLYRQPGRLDS  136 (185)
T ss_pred             ------------------EeeeeeCCCCCCCCCceEEEEEEEEcCCcccc
Confidence                              2468999999964  79999999999987765

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	184
3n08_A	153	Crystal Structure Of A Putative Phosphatidylethanol		1e-18
1vi3_A	170	Crystal Structure Of An Hypothetical Protein Length		3e-16
1fjj_A	159	Crystal Structure Of E.Coli Ybhb Protein, A New Mem		4e-16
1fux_A	166	Crystal Structure Of E.Coli Ybcl, A New Member Of T		3e-15
2evv_A	207	Crystal Structure Of The Pebp-like Protein Of Unkno		3e-04

>pdb|3N08|A Chain A, Crystal Structure Of A Putative Phosphatidylethanolamine-Binding Protein (Pebp) Homolog Ct736 From Chlamydia Trachomatis DUW-3CX Length = 153

Iteration: 1
 Score = 89.0 bits (219), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 55/164 (33%), Positives = 83/164 (50%), Gaps = 14/164 (8%)
Query: 21  SEEFRLVSPEINHQGRLPRKYTNEGQGAKKNISPRLEWYNVPEGTKSLALVVEDIDAPDP 80
           S   +L S   ++   +P+KY+ +G G    ISP L + +VP   KSL L+VED D P  
Sbjct: 1   SNAMQLTSQAFSYGRPIPKKYSCQGVG----ISPPLSFSDVPREAKSLVLIVEDPDVPPS 56
Query: 81  SGPIVPWTHWVVVNIPPTLKGLPEGFSGKEEEIGGEYAGIKEGNNDWKVPGWRGPKLPNH 140
                 W HW+V N+ P +  L EG          +   ++  N   ++ G+  P  P+ 
Sbjct: 57  VREDGLWIHWIVYNLSPVVSNLAEG---------AQIFAVQGLNTAGEI-GYCPPCPPDA 106
Query: 141 GHRFQFKLYALDDEMHLGNKVTKERLLEAIEGHVLGEAVLTAIF 184
            HR+ F  YALD  +     VTKE+LLEA++GH++  A L   +
Sbjct: 107 KHRYYFYAYALDVVLSDEEGVTKEQLLEAMDGHIIATAELMGTY 150

>pdb|1VI3|A Chain A, Crystal Structure Of An Hypothetical Protein Length = 170

Iteration: 1
 Score = 80.9 bits (198), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 80/165 (48%), Gaps = 10/165 (6%)
Query: 23  EFRLVSPEINHQGRLPRKYTNEGQGAK-KNISPRLEWYNVPEGTKSLALVVEDIDAPDPS 81
             +L+S ++    +LP ++   G G    NISP L W +VP GTKS  +   D DAP  S
Sbjct: 2   SLKLISNDLRDGDKLPHRHVFNGXGYDGDNISPHLAWDDVPAGTKSFVVTCYDPDAPTGS 61
Query: 82  GPIVPWTHWVVVNIPPTLKGLPEGFSGKEEEIGGEYAGIKEGNNDWKVPGWRGPKLP-NH 140
           G    W HWVVVN+P   + LP+GF      +     G+ +   D+   G+ G   P   
Sbjct: 62  G----WWHWVVVNLPADTRVLPQGFG---SGLVAXPDGVLQTRTDFGKTGYDGAAPPKGE 114
Query: 141 GHRFQFKLYALDDE-MHLGNKVTKERLLEAIEGHVLGEAVLTAIF 184
            HR+ F ++ALD E + +    +   +   +  H L  A +TA F
Sbjct: 115 THRYIFTVHALDIERIDVDEGASGAXVGFNVHFHSLASASITAXF 159

>pdb|1FJJ|A Chain A, Crystal Structure Of E.Coli Ybhb Protein, A New Member Of The Mammalian Pebp Family Length = 159

Iteration: 1
 Score = 80.9 bits (198), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 54/163 (33%), Positives = 80/163 (49%), Gaps = 10/163 (6%)
Query: 25  RLVSPEINHQGRLPRKYTNEGQGAK-KNISPRLEWYNVPEGTKSLALVVEDIDAPDPSGP 83
           +L+S ++    +LP ++   G G    NISP L W +VP GTKS  +   D DAP  SG 
Sbjct: 3   KLISNDLRDGDKLPHRHVFNGXGYDGDNISPHLAWDDVPAGTKSFVVTCYDPDAPTGSG- 61
Query: 84  IVPWTHWVVVNIPPTLKGLPEGFSGKEEEIGGEYAGIKEGNNDWKVPGWRGPKLP-NHGH 142
              W HWVVVN+P   + LP+GF      +     G+ +   D+   G+ G   P    H
Sbjct: 62  ---WWHWVVVNLPADTRVLPQGFG---SGLVAXPDGVLQTRTDFGKTGYDGAAPPKGETH 115
Query: 143 RFQFKLYALDDE-MHLGNKVTKERLLEAIEGHVLGEAVLTAIF 184
           R+ F ++ALD E + +    +   +   +  H L  A +TA F
Sbjct: 116 RYIFTVHALDIERIDVDEGASGAXVGFNVHFHSLASASITAXF 158

>pdb|1FUX|A Chain A, Crystal Structure Of E.Coli Ybcl, A New Member Of The Mammalian Pebp Family Length = 166

Iteration: 1
 Score = 78.2 bits (191), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 55/136 (40%), Positives = 73/136 (53%), Gaps = 11/136 (8%)
Query: 23  EFRLVSPEINHQGRLPRKYTNEGQGAKK-NISPRLEWYNVPEGTKSLALVVEDIDAPDPS 81
           EF++ S EI    +L   +   G G +  N SP L W  VPEGTKS A+ V D DAP  S
Sbjct: 2   EFQVTSNEIKTGEQLTTSHVFSGFGCEGGNTSPSLTWSGVPEGTKSFAVTVYDPDAPTGS 61
Query: 82  GPIVPWTHWVVVNIPPTLKGLPEGFSGKEEEIGGEY-AGIKEGNNDWKVPGWRGPKLP-- 138
           G    W HW VVNIP T+  LP   +G+ +  G +   G  +G ND+   G+ G   P  
Sbjct: 62  G----WWHWTVVNIPATVTYLPVD-AGRRD--GTKLPTGAVQGRNDFGYAGFGGACPPKG 114
Query: 139 NHGHRFQFKLYALDDE 154
           +  H +QFK++AL  E
Sbjct: 115 DKPHHYQFKVWALKTE 130

>pdb|2EVV|A Chain A, Crystal Structure Of The Pebp-like Protein Of Unknown Function Hp0218 From Helicobacter Pylori Length = 207

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 55/130 (42%), Gaps = 19/130 (14%)
Query: 35  GRLPRKYTNEGQGAKKNISPRLEWYNVPEGTKSLALVVEDIDAPDPSGPIVPWTHWVVVN 94
           G  P+ + N         SP++ W  V EG +S AL + D DA    G   P+ HWVV N
Sbjct: 44  GNAPKAFLNSN--GLPTYSPKISWQKV-EGAQSYALELIDHDAQKVCG--XPFVHWVVGN 98
Query: 95  IPPTLKGLPEGFSGKEEEIGGEYAGIKEG------------NNDWKVPGWRGPKLPNHGH 142
           I   +  L E  S  ++ I      + +G             ++     + GP  PN  H
Sbjct: 99  IAHNV--LEENASXXDKRIVQGVNSLTQGFIRSPLNESEKQRSNLNNSVYIGPXPPNGDH 156
Query: 143 RFQFKLYALD 152
            +  ++YALD
Sbjct: 157 HYLIQVYALD 166

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	184
3n08_A	153	Putative phosphatidylethanolamine-binding protein;	2e-62
1fux_A	166	Hypothetical 19.5 kDa protein in EMRE-RUS intergen	1e-54
1fjj_A	159	Hypothetical 17.1 kDa protein in MODC-BIOA interge	2e-52
2evv_A	207	Hypothetical protein HP0218; alpha-beta structure,	4e-47
2gzq_A	200	Phosphatidylethanolamine-binding protein; structur	7e-13
1wpx_B	220	Carboxypeptidase Y inhibitor; carboxypeptidase inh	4e-12
2jyz_A	179	CG7054-PA, GH14779P, PEBP; PEBP/RKIP, molecular mo	1e-08

>3n08_A Putative phosphatidylethanolamine-binding protein; eukarytic homolog RAF kinase inhibitor protein (RKIP). csgid structural genomics; 1.25A {Chlamydia trachomatis} Length = 153

 Score =  189 bits (481), Expect = 2e-62
 Identities = 55/164 (33%), Positives = 79/164 (48%), Gaps = 14/164 (8%)

Query: 21  SEEFRLVSPEINHQGRLPRKYTNEGQGAKKNISPRLEWYNVPEGTKSLALVVEDIDAPDP 80
           S   +L S   ++   +P+KY+ +G      ISP L + +VP   KSL L+VED D P  
Sbjct: 1   SNAMQLTSQAFSYGRPIPKKYSCQGV----GISPPLSFSDVPREAKSLVLIVEDPDVPPS 56

Query: 81  SGPIVPWTHWVVVNIPPTLKGLPEGFSGKEEEIGGEYAGIKEGNNDWKVPGWRGPKLPNH 140
                 W HW+V N+ P +  L EG                +G N     G+  P  P+ 
Sbjct: 57  VREDGLWIHWIVYNLSPVVSNLAEGAQ----------IFAVQGLNTAGEIGYCPPCPPDA 106

Query: 141 GHRFQFKLYALDDEMHLGNKVTKERLLEAIEGHVLGEAVLTAIF 184
            HR+ F  YALD  +     VTKE+LLEA++GH++  A L   +
Sbjct: 107 KHRYYFYAYALDVVLSDEEGVTKEQLLEAMDGHIIATAELMGTY 150

>1fux_A Hypothetical 19.5 kDa protein in EMRE-RUS intergenic region; beta protein, unknown function; 1.81A {Escherichia coli} SCOP: b.17.1.2 Length = 166

 Score =  169 bits (431), Expect = 1e-54
 Identities = 55/166 (33%), Positives = 80/166 (48%), Gaps = 10/166 (6%)

Query: 23  EFRLVSPEINHQGRLPRKYTNEGQGAK-KNISPRLEWYNVPEGTKSLALVVEDIDAPDPS 81
           EF++ S EI    +L   +   G G +  N SP L W  VPEGTKS A+ V D DAP  S
Sbjct: 2   EFQVTSNEIKTGEQLTTSHVFSGFGCEGGNTSPSLTWSGVPEGTKSFAVTVYDPDAPTGS 61

Query: 82  GPIVPWTHWVVVNIPPTLKGLPEGFSGKEEEIGGEYAGIKEGNNDWKVPGWRGPKLP-NH 140
           G    W HW VVNIP T+  LP     ++        G  +G ND+   G+ G   P   
Sbjct: 62  G----WWHWTVVNIPATVTYLPVDAGRRDGTKLPT--GAVQGRNDFGYAGFGGACPPKGD 115

Query: 141 G-HRFQFKLYALDDEM-HLGNKVTKERLLEAIEGHVLGEAVLTAIF 184
             H +QFK++AL  E   + +  +   +   +  + +  A +T ++
Sbjct: 116 KPHHYQFKVWALKTEKIPVDSNSSGALVGYMLNANKIATAEITPVY 161

>1fjj_A Hypothetical 17.1 kDa protein in MODC-BIOA intergenic region; PEPB family, lipid binding protein; HET: MSE EPE; 1.66A {Escherichia coli} SCOP: b.17.1.2 PDB: 1vi3_A* Length = 159

 Score =  164 bits (416), Expect = 2e-52
 Identities = 54/164 (32%), Positives = 80/164 (48%), Gaps = 10/164 (6%)

Query: 24  FRLVSPEINHQGRLPRKYTNEGQGAK-KNISPRLEWYNVPEGTKSLALVVEDIDAPDPSG 82
            +L+S ++    +LP ++   G G    NISP L W +VP GTKS  +   D DAP  SG
Sbjct: 2   MKLISNDLRDGDKLPHRHVFNGMGYDGDNISPHLAWDDVPAGTKSFVVTCYDPDAPTGSG 61

Query: 83  PIVPWTHWVVVNIPPTLKGLPEGFSGKEEEIGGEYAGIKEGNNDWKVPGWRGPKLP-NHG 141
               W HWVVVN+P   + LP+GF      +     G+ +   D+   G+ G   P    
Sbjct: 62  ----WWHWVVVNLPADTRVLPQGFGSGLVAMPD---GVLQTRTDFGKTGYDGAAPPKGET 114

Query: 142 HRFQFKLYALDDEM-HLGNKVTKERLLEAIEGHVLGEAVLTAIF 184
           HR+ F ++ALD E   +    +   +   +  H L  A +TA+F
Sbjct: 115 HRYIFTVHALDIERIDVDEGASGAMVGFNVHFHSLASASITAMF 158

>2evv_A Hypothetical protein HP0218; alpha-beta structure, dimer, structural genomics, PSI, prote structure initiative; HET: MSE; 2.59A {Helicobacter pylori} Length = 207

 Score =  152 bits (384), Expect = 4e-47
 Identities = 37/180 (20%), Positives = 62/180 (34%), Gaps = 21/180 (11%)

Query: 22  EEFRLVSPEINHQGRLPRKYTNEGQ------GAKKNISPRLEWYNVPEGTKSLALVVEDI 75
           + F ++    +  G L  K+                 SP++ W  V  G +S AL + D 
Sbjct: 24  KTFEVMIQTDSK-GYLDAKFGGNAPKAFLNSNGLPTYSPKISWQKVE-GAQSYALELIDH 81

Query: 76  DAPDPSGPIVPWTHWVVVNIPPTLKGLPEGFSGKEEEIG----------GEYAGIKEGNN 125
           DA    G   P+ HWVV NI   +         K    G                ++  +
Sbjct: 82  DAQKVCGM--PFVHWVVGNIAHNVLEENASMMDKRIVQGVNSLTQGFIRSPLNESEKQRS 139

Query: 126 DWKVPGWRGPKLPNHGHRFQFKLYALDDEM-HLGNKVTKERLLEAIEGHVLGEAVLTAIF 184
           +     + GP  PN  H +  ++YALD     L        L + +  H++       ++
Sbjct: 140 NLNNSVYIGPMPPNGDHHYLIQVYALDIPKLALKAPFFLGDLHDKMRNHIIAIGRKEFLY 199

>2gzq_A Phosphatidylethanolamine-binding protein; structural genomics, PSI, protein structure initiative; HET: MSE; 1.30A {Plasmodium vivax} PDB: 2r77_A Length = 200

 Score = 63.1 bits (153), Expect = 7e-13
 Identities = 18/108 (16%), Positives = 30/108 (27%), Gaps = 21/108 (19%)

Query: 50  KNISPRLEWYNVPEGTKSLALVVEDIDAPDPSGPIV-PWTHWVVVNIPPTLKGLPEGFSG 108
            ++   +++   P       L + D D P    P    + HW V  I           + 
Sbjct: 61  GSVPRNIKFSEEPPEDYCYILFMIDPDFPSRRRPDGRDYVHWAVSGIKSKELVKGTDKNC 120

Query: 109 KEEEIGGEYAGIKEGNNDWKVPGWRGPK-LPNHG-HRFQFKLYALDDE 154
                               +  + GP      G HR  F L  + +E
Sbjct: 121 IT------------------LLPYVGPSIKKGTGLHRISFILSLVKEE 150

>1wpx_B Carboxypeptidase Y inhibitor; carboxypeptidase inhibitor, serine proteinase inhibitor, Pro inhibitor complex; HET: NAG NDG; 2.70A {Saccharomyces cerevisiae} SCOP: b.17.1.1 Length = 220

 Score = 61.6 bits (149), Expect = 4e-12
 Identities = 22/116 (18%), Positives = 34/116 (29%), Gaps = 8/116 (6%)

Query: 47  GAKKNISPRLEWYNVPEGTKSLALVVEDIDAPDPSGPIV-PWTHWVVVNIPPTLKGLPEG 105
             +   S       VP+      LV+ D DAP  +      + H V  ++    +   E 
Sbjct: 69  NKQMQKSVPQANAYVPQDDDLFTLVMTDPDAPSKTDHKWSEFCHLVECDLKLLNEATHET 128

Query: 106 FSGKEEEIGGEYAGIKEGNNDWKVPGWRGPKLP-NHG-HRFQFKLYALDDEMHLGN 159
               E                  +  + GP  P   G HR+ F LY     +    
Sbjct: 129 SGATEFFASE-----FNTKGSNTLIEYMGPAPPKGSGPHRYVFLLYKQPKGVDSSK 179

>2jyz_A CG7054-PA, GH14779P, PEBP; PEBP/RKIP, molecular modeling, chemical shift variations, titration, unknown function; NMR {Drosophila melanogaster} Length = 179

 Score = 51.1 bits (122), Expect = 1e-08
 Identities = 25/103 (24%), Positives = 37/103 (35%), Gaps = 20/103 (19%)

Query: 53  SPRLEWYNVPEGTKSLALVVEDIDAPDPSGPIV-PWTHWVVVNIPPTLKGLPEGFSGKEE 111
            P + W  +   +  L L++ D DAP    P      HW VVNIP + +    G S  + 
Sbjct: 41  QPIVSWSGLEGKSNLLTLLMVDPDAPTRQDPKYREILHWSVVNIPGSNENPSGGHSLADY 100

Query: 112 EIGGEYAGIKEGNNDWKVPGWRGPKLPNHGHRFQFKLYALDDE 154
              G                  G       HR+ F LY  +++
Sbjct: 101 VGSGPPKDT-------------GL------HRYIFLLYRQENK 124

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	184
3n08_A	153	Putative phosphatidylethanolamine-binding protein;	100.0
1fjj_A	159	Hypothetical 17.1 kDa protein in MODC-BIOA interge	100.0
1fux_A	166	Hypothetical 19.5 kDa protein in EMRE-RUS intergen	100.0
2evv_A	207	Hypothetical protein HP0218; alpha-beta structure,	100.0
1wpx_B	220	Carboxypeptidase Y inhibitor; carboxypeptidase inh	99.96
2iqy_A	190	Phosphatidylethanolamine-binding protein 1; alpha-	99.95
2jyz_A	179	CG7054-PA, GH14779P, PEBP; PEBP/RKIP, molecular mo	99.95
3axy_A	170	Protein heading DATE 3A; phosphatidylethanolamine-	99.95
1wko_A	180	Terminal flower 1 protein; CIS-peptide, PEBP, sign	99.94
2gzq_A	200	Phosphatidylethanolamine-binding protein; structur	99.92

>3n08_A Putative phosphatidylethanolamine-binding protein; eukarytic homolog RAF kinase inhibitor protein (RKIP). csgid structural genomics; 1.25A {Chlamydia trachomatis} SCOP: b.17.1.0

Probab=100.00  E-value=6.8e-54  Score=335.02  Aligned_cols=149  Identities=36%  Similarity=0.590  Sum_probs=140.2

Q ss_pred             CccEEEcCCCCCCCCCCcccccCCCCCCCCCcCeeEeccCCCCceEEEEEEecCCCCCCCCCCcceEEEEEEccCCCCCC
Q 029999           22 EEFRLVSPEINHQGRLPRKYTNEGQGAKKNISPRLEWYNVPEGTKSLALVVEDIDAPDPSGPIVPWTHWVVVNIPPTLKG  101 (184)
Q Consensus        22 ~~~~l~S~~f~~g~~lp~~~t~~g~g~~~n~sP~l~w~~~P~~tks~alim~DpDaP~~~~p~~~~~HW~v~nIp~~~~~  101 (184)
                      ..|+|+|++|.+|+.||.+|+|+|    +|+||+|+|+++|++||||+|+|+|||||++..+.++|+||+|||||+++++
T Consensus         2 ~~~~l~S~~f~~g~~ip~~~t~~G----~n~SP~l~w~~~P~~tks~ali~~DpDAPs~~~~~~~~~HWvv~nIp~~~~~   77 (153)
T 3n08_A            2 NAMQLTSQAFSYGRPIPKKYSCQG----VGISPPLSFSDVPREAKSLVLIVEDPDVPPSVREDGLWIHWIVYNLSPVVSN   77 (153)
T ss_dssp             CCCEEEBTTBCTTEECCGGGSTTS----CCCCCCEEEECCCTTCCEEEEEEEETTSCTTTCTTSCEEEEEEEEECTTCCE
T ss_pred             CcEEEECCCcCCCCCCCHHHcCCC----CCcCcEEEEcCCCCCCeEEEEEEECCCCCCccCCCCcEEEEEEEcCCCCccc
Confidence            469999999999999999999988    5899999999999999999999999999987666678999999999999889


Q ss_pred             CCCCCCCCcccccCcccCeeeecCCCCCCCccCCCCCCCCceEEEEEEeeCCcCCCCCcccHHHHHHHHhcCeeEEEEEE
Q 029999          102 LPEGFSGKEEEIGGEYAGIKEGNNDWKVPGWRGPKLPNHGHRFQFKLYALDDEMHLGNKVTKERLLEAIEGHVLGEAVLT  181 (184)
Q Consensus       102 l~~g~~~~~~~~~~~~~g~~~g~n~~g~~~Y~GP~Pp~g~HrY~f~vyAl~~~l~l~~~~~~~~l~~a~~~hvl~~~~l~  181 (184)
                      |++|..          .+.+||.|+++..+|.|||||.|.|||+|+||||+.+|+|++++++++|.++|++|+|++|+|+
T Consensus        78 l~~g~~----------~g~~~g~n~~g~~~Y~GP~PP~g~HrY~F~vyAld~~L~l~~~~~~~~l~~a~~ghvl~~a~l~  147 (153)
T 3n08_A           78 LAEGAQ----------IFAVQGLNTAGEIGYCPPCPPDAKHRYYFYAYALDVVLSDEEGVTKEQLLEAMDGHIIATAELM  147 (153)
T ss_dssp             ECTTCC----------CSSEECBCTTSSBSCCCCCCSSSCEEEEEEEEEESSCCCCCSSCCHHHHHHHHTTTEEEEEEEE
T ss_pred             ccCCCC----------CCceEeecCCCCccccCCcCcCCCEEEEEEEEEECCcCCCCCCCCHHHHHHHhhhCeEEEEEEE
Confidence            999862          3578999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEC
Q 029999          182 AIF  184 (184)
Q Consensus       182 g~y  184 (184)
                      |+|
T Consensus       148 g~y  150 (153)
T 3n08_A          148 GTY  150 (153)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            998

>1fjj_A Hypothetical 17.1 kDa protein in MODC-BIOA intergenic region; PEPB family, lipid binding protein; HET: MSE EPE; 1.66A {Escherichia coli} SCOP: b.17.1.2 PDB: 1vi3_A*

Probab=100.00  E-value=4.4e-51  Score=321.01  Aligned_cols=155  Identities=34%  Similarity=0.595  Sum_probs=138.1

Q ss_pred             ccEEEcCCCCCCCCCCcccccCCCCC-CCCCcCeeEeccCCCCceEEEEEEecCCCCCCCCCCcceEEEEEEccCCCCCC
Q 029999           23 EFRLVSPEINHQGRLPRKYTNEGQGA-KKNISPRLEWYNVPEGTKSLALVVEDIDAPDPSGPIVPWTHWVVVNIPPTLKG  101 (184)
Q Consensus        23 ~~~l~S~~f~~g~~lp~~~t~~g~g~-~~n~sP~l~w~~~P~~tks~alim~DpDaP~~~~p~~~~~HW~v~nIp~~~~~  101 (184)
                      .|+|+|++|.+|+.||.+|++.+.+| |+|+||+|+|+++|++||||+|+|+|||||++.    +|+||+|+|||+++++
T Consensus         1 ~~~l~S~~f~~g~~ip~~~~~~~~~~~G~n~sP~l~w~~~P~~t~s~ali~~DPDAP~~~----~~~HW~v~nIp~~~~~   76 (159)
T 1fjj_A            1 AMKLISNDLRDGDKLPHRHVFNGMGYDGDNISPHLAWDDVPAGTKSFVVTCYDPDAPTGS----GWWHWVVVNLPADTRV   76 (159)
T ss_dssp             CCEEECSSCCTTSBCCGGGBCSSTTCCCCCCCCCEEEECCCTTCCEEEEEEEETTSTTTT----CEEEEEEEEEETTCCE
T ss_pred             CeEEEccCcCCcCCCChhHhccccccCCCCcCCeEEEcCCCCCCeEEEEEEECCCCCCCC----cEEEEEEEccCCCccc
Confidence            48999999999999999966554443 479999999999999999999999999999753    5999999999999889


Q ss_pred             CCCCCCCCcccccCcccCeeeecCCCCCCCccCCCCCCC-CceEEEEEEeeCC-cCCCCCcccHHHHHHHHhcCeeEEEE
Q 029999          102 LPEGFSGKEEEIGGEYAGIKEGNNDWKVPGWRGPKLPNH-GHRFQFKLYALDD-EMHLGNKVTKERLLEAIEGHVLGEAV  179 (184)
Q Consensus       102 l~~g~~~~~~~~~~~~~g~~~g~n~~g~~~Y~GP~Pp~g-~HrY~f~vyAl~~-~l~l~~~~~~~~l~~a~~~hvl~~~~  179 (184)
                      |++|......   ..+.|.+||.|+++..+|.|||||.| .|||+|+||||+. +|+|++++++++|.++|++|+|++|+
T Consensus        77 l~~g~~~~~~---~~~~g~~~g~n~~g~~~Y~GP~PP~g~~HRY~F~lyald~~~l~l~~~~~~~~l~~a~~ghvl~~a~  153 (159)
T 1fjj_A           77 LPQGFGSGLV---AMPDGVLQTRTDFGKTGYDGAAPPKGETHRYIFTVHALDIERIDVDEGASGAMVGFNVHFHSLASAS  153 (159)
T ss_dssp             ECTTGGGTSS---CCCTTCEECBCTTSSBSCCCBCCSTTCCEEEEEEEEEESSSCCSCCTTCCHHHHHHHHHHHEEEEEE
T ss_pred             cCCCcccccc---cCCCCcEEeecCCCCCcccCCCCcCCCceEEEEEEEEccCcccCCCCCCCHHHHHHHhhhceEEEEE
Confidence            9998753211   12457899999999999999999999 6999999999996 79999999999999999999999999


Q ss_pred             EEEEC
Q 029999          180 LTAIF  184 (184)
Q Consensus       180 l~g~y  184 (184)
                      |+|+|
T Consensus       154 l~g~y  158 (159)
T 1fjj_A          154 ITAMF  158 (159)
T ss_dssp             EEEEE
T ss_pred             EEEEE
Confidence            99998

>1fux_A Hypothetical 19.5 kDa protein in EMRE-RUS intergenic region; beta protein, unknown function; 1.81A {Escherichia coli} SCOP: b.17.1.2

Probab=100.00  E-value=5.6e-50  Score=316.71  Aligned_cols=156  Identities=34%  Similarity=0.567  Sum_probs=137.4

Q ss_pred             ccEEEcCCCCCCCCCCcccccCCCCC-CCCCcCeeEeccCCCCceEEEEEEecCCCCCCCCCCcceEEEEEEccCCCCCC
Q 029999           23 EFRLVSPEINHQGRLPRKYTNEGQGA-KKNISPRLEWYNVPEGTKSLALVVEDIDAPDPSGPIVPWTHWVVVNIPPTLKG  101 (184)
Q Consensus        23 ~~~l~S~~f~~g~~lp~~~t~~g~g~-~~n~sP~l~w~~~P~~tks~alim~DpDaP~~~~p~~~~~HW~v~nIp~~~~~  101 (184)
                      +|+|+|++|.+|+.||.+|++++.+| |+|+||+|+|+++|++||||+|+|+|||||++.    +|+||+|+|||+++++
T Consensus         2 ~~~l~S~~~~~g~~ip~~~~~~~~~~~G~n~sP~l~w~~~P~~t~s~ali~~DPDAP~~~----~~~HW~v~nIp~~~~~   77 (166)
T 1fux_A            2 EFQVTSNEIKTGEQLTTSHVFSGFGCEGGNTSPSLTWSGVPEGTKSFAVTVYDPDAPTGS----GWWHWTVVNIPATVTY   77 (166)
T ss_dssp             CCEEECSSCCTTSBCCGGGBCEETTEECCCCCCCEEEECCCTTCCEEEEEEEETTSTTTT----CEEEEEEEEEETTCCE
T ss_pred             ceEEeccCcCCcCCCCHHHhccccccCCCCcCCeEEEeCCCCCCeEEEEEEECCCCCCCC----cEEEeEEeCcCCCccc
Confidence            59999999999999999775443333 469999999999999999999999999999753    6999999999999889


Q ss_pred             CCCCCCCCcccccCcccCeeeecCCCCCCCccCCCCCCC--CceEEEEEEeeCC-cCCCCCcccHHHHHHHHhcCeeEEE
Q 029999          102 LPEGFSGKEEEIGGEYAGIKEGNNDWKVPGWRGPKLPNH--GHRFQFKLYALDD-EMHLGNKVTKERLLEAIEGHVLGEA  178 (184)
Q Consensus       102 l~~g~~~~~~~~~~~~~g~~~g~n~~g~~~Y~GP~Pp~g--~HrY~f~vyAl~~-~l~l~~~~~~~~l~~a~~~hvl~~~  178 (184)
                      |++|......  ...+.|.+||.|+++..+|.|||||.|  .|||+|+||||+. +|+|++++++++|.++|++|+|++|
T Consensus        78 l~~g~~~~~~--~~l~~g~~~g~nd~g~~~Y~GP~PP~g~g~HRY~F~lyald~~~l~l~~~~~~~~l~~a~~ghvl~~a  155 (166)
T 1fux_A           78 LPVDAGRRDG--TKLPTGAVQGRNDFGYAGFGGACPPKGDKPHHYQFKVWALKTEKIPVDSNSSGALVGYMLNANKIATA  155 (166)
T ss_dssp             ECTTTTCTTC--TTSCTTCEECCCTTSSSSCCCBCCCTTCCCEECEEEEEEESCSCCCCCTTCCHHHHHHHHHTTEEEEE
T ss_pred             ccCCcccccc--ccCCCCcEEeecCCCCccccCCCCcCCCCcEEEEEEEeEeccccCCCCCCCCHHHHHHHhhcCeEEEE
Confidence            9999754210  012457899999999999999999987  6999999999996 7999999999999999999999999


Q ss_pred             EEEEEC
Q 029999          179 VLTAIF  184 (184)
Q Consensus       179 ~l~g~y  184 (184)
                      +|+|+|
T Consensus       156 ~l~g~y  161 (166)
T 1fux_A          156 EITPVY  161 (166)
T ss_dssp             EECCEE
T ss_pred             EEEEEE
Confidence            999987

>2evv_A Hypothetical protein HP0218; alpha-beta structure, dimer, structural genomics, PSI, prote structure initiative; HET: MSE; 2.59A {Helicobacter pylori}

Probab=100.00  E-value=2.6e-45  Score=298.70  Aligned_cols=151  Identities=26%  Similarity=0.432  Sum_probs=130.1

Q ss_pred             hhccCCccEEEcCCCCCCCCCCcccccC-CCCCCCCCcC---------eeEeccCCCCceEEEEEEecCCCCCCCCCCcc
Q 029999           17 IAMASEEFRLVSPEINHQGRLPRKYTNE-GQGAKKNISP---------RLEWYNVPEGTKSLALVVEDIDAPDPSGPIVP   86 (184)
Q Consensus        17 ~~~~~~~~~l~S~~f~~g~~lp~~~t~~-g~g~~~n~sP---------~l~w~~~P~~tks~alim~DpDaP~~~~p~~~   86 (184)
                      +....+.|+|+|+ |.+|+.||++|+|+ |.    |+||         +|+|+++ ++||||||+|+|||||++.+  ++
T Consensus        19 ~~~~~~~~~lss~-f~~g~~ip~~y~~~~G~----~~sP~~~~p~~Sp~L~W~~~-~gtks~aLvm~DPDAP~~~g--~~   90 (207)
T 2evv_A           19 FQGHMKTFEVMIQ-TDSKGYLDAKFGGNAPK----AFLNSNGLPTYSPKISWQKV-EGAQSYALELIDHDAQKVCG--MP   90 (207)
T ss_dssp             ----CEECCEECC-CCTTSBCCGGGSTTSCG----GGBCTTSCBCCCCCEEECCC-TTCSEEEEEEEETTHHHHHS--SC
T ss_pred             ccCCCcceEEecC-CCCcCCCChhhcccCCC----CcCCccCCCCccceEEEecC-CCCeEEEEEEECCCCCCCCC--Cc
Confidence            3334457999987 99999999999998 64    5555         8999999 89999999999999997532  57


Q ss_pred             eEEEEEEccCCCCCCCCCCCCCCcccccCcccCeeeecCC----CCC---------------CCccCCCCCCCCceEEEE
Q 029999           87 WTHWVVVNIPPTLKGLPEGFSGKEEEIGGEYAGIKEGNND----WKV---------------PGWRGPKLPNHGHRFQFK  147 (184)
Q Consensus        87 ~~HW~v~nIp~~~~~l~~g~~~~~~~~~~~~~g~~~g~n~----~g~---------------~~Y~GP~Pp~g~HrY~f~  147 (184)
                      |+||+|+||  ..++|++|+..       .+.+++||.|+    ++.               .+|.|||||.|.|||+|+
T Consensus        91 ~~HWvv~NI--~~~~l~eg~~~-------~~~g~~qG~N~~~~~~g~~~~~~~~k~~~~~~~~~Y~GP~PP~G~HRYvF~  161 (207)
T 2evv_A           91 FVHWVVGNI--AHNVLEENASM-------MDKRIVQGVNSLTQGFIRSPLNESEKQRSNLNNSVYIGPMPPNGDHHYLIQ  161 (207)
T ss_dssp             EEEEEEEEE--CSSEECTTHHH-------HCSSSEECCCTTCSCSTTCSSCHHHHHHHHHHTCSCCCCCCSSSCEEEEEE
T ss_pred             EEEEEEeCC--CCCccccCccc-------CCCCceecccccccccccccccccccccccccccccCCCCCCCCcEEEEEE
Confidence            999999999  45689998642       12468999999    887               899999999999999999


Q ss_pred             EEeeCC-cCCCCCcccHHHHHHHHhcCeeEEEEEEEEC
Q 029999          148 LYALDD-EMHLGNKVTKERLLEAIEGHVLGEAVLTAIF  184 (184)
Q Consensus       148 vyAl~~-~l~l~~~~~~~~l~~a~~~hvl~~~~l~g~y  184 (184)
                      ||||+. +|+|++++++++|.++|++|||++|+|+|+|
T Consensus       162 vyALd~~~L~l~~~~~~~~l~~am~gHvLa~a~l~g~y  199 (207)
T 2evv_A          162 VYALDIPKLALKAPFFLGDLHDKMRNHIIAIGRKEFLY  199 (207)
T ss_dssp             EEEESSSCCCCCSSCCHHHHHHHHTTCEEEEEEEEEEE
T ss_pred             EEEecCccCCCCCCCCHHHHHHHhhcCeEEEEEEEEEE
Confidence            999996 9999999999999999999999999999997

>1wpx_B Carboxypeptidase Y inhibitor; carboxypeptidase inhibitor, serine proteinase inhibitor, Pro inhibitor complex; HET: NAG NDG; 2.70A {Saccharomyces cerevisiae} SCOP: b.17.1.1

Probab=99.96  E-value=2.3e-30  Score=212.38  Aligned_cols=125  Identities=18%  Similarity=0.205  Sum_probs=96.3

Q ss_pred             ccEEEcCC---CCCCCCCCcccccCCCCCCCCCcCe----------eEeccCCCCceEEEEEEecCCCCCCCCCC-cceE
Q 029999           23 EFRLVSPE---INHQGRLPRKYTNEGQGAKKNISPR----------LEWYNVPEGTKSLALVVEDIDAPDPSGPI-VPWT   88 (184)
Q Consensus        23 ~~~l~S~~---f~~g~~lp~~~t~~g~g~~~n~sP~----------l~w~~~P~~tks~alim~DpDaP~~~~p~-~~~~   88 (184)
                      .|+|+.+.   +.+|..|+.+++|.+.    +++..          ..|+++|+++++|+|+|+|||||++.++. ++|+
T Consensus        36 ~L~V~y~~~~~v~~G~~l~~~~t~~~P----~v~~~~~~~~~~~~~~~~~~~p~~~~~~~lvm~DpDaP~~~~p~~~~~~  111 (220)
T 1wpx_B           36 ILAVEYSSSAPVAMGNTLPTEKARSKP----QFQFTFNKQMQKSVPQANAYVPQDDDLFTLVMTDPDAPSKTDHKWSEFC  111 (220)
T ss_dssp             EEEEEEETTEEECSSCBCCGGGGSSCC----EEEEEEETTCC------CCCCCCSSCCEEEEEEESSSSCSSCCTTCSEE
T ss_pred             EEEEEECCCcEeCCCCCcCHHHhcCCC----eeEeCCCCCcccccccccccCCCCCceEEEEEECCCCCCCCCCCcCcEE
Confidence            68898877   7899999999999863    44444          47999999999999999999999987666 7899


Q ss_pred             EEEEEccCCCCCCCCCCCCCCcccccCcccCeeeecCC--CCCCCccCCCCCCC--CceEEEEEEeeCCcCCCC
Q 029999           89 HWVVVNIPPTLKGLPEGFSGKEEEIGGEYAGIKEGNND--WKVPGWRGPKLPNH--GHRFQFKLYALDDEMHLG  158 (184)
Q Consensus        89 HW~v~nIp~~~~~l~~g~~~~~~~~~~~~~g~~~g~n~--~g~~~Y~GP~Pp~g--~HrY~f~vyAl~~~l~l~  158 (184)
                      ||+++|||++.++|++|....       +.|.+++.|+  .+..+|.|||||.|  .|||+|+||||+.+|+++
T Consensus       112 HW~v~nIp~~~~~l~~~~~~~-------~~g~~~~~~~~~~~~~~Y~gP~Pp~g~g~HRY~f~lya~~~~l~~~  178 (220)
T 1wpx_B          112 HLVECDLKLLNEATHETSGAT-------EFFASEFNTKGSNTLIEYMGPAPPKGSGPHRYVFLLYKQPKGVDSS  178 (220)
T ss_dssp             EEEEEEEEECC---------C-------CEEEEEEECTTCEEEECCCCCCCCTTSCCEEEEEEEEECCTTCCGG
T ss_pred             EEEEEccCCCccccccccCCC-------CccceEeecCCccccccccCCCCccCCCCceEEEEEEecCCcCCcc
Confidence            999999999998998875321       2356777664  46789999999976  699999999999887643

>2iqy_A Phosphatidylethanolamine-binding protein 1; alpha-beta, hydrolase inhibitor; 1.40A {Rattus norvegicus} PDB: 2iqx_A 1b7a_A* 1a44_A 1beh_A 1bd9_A 2l7w_A 2qyq_A* 1kn3_A

Probab=99.95  E-value=3.1e-28  Score=195.88  Aligned_cols=105  Identities=23%  Similarity=0.434  Sum_probs=90.5

Q ss_pred             CccEEEc---CCCCCCCCCCcccccCCCCCCCCCcCe-eEeccCCCCceEEEEEEecCCCCCCCCCC-cceEEEEEEccC
Q 029999           22 EEFRLVS---PEINHQGRLPRKYTNEGQGAKKNISPR-LEWYNVPEGTKSLALVVEDIDAPDPSGPI-VPWTHWVVVNIP   96 (184)
Q Consensus        22 ~~~~l~S---~~f~~g~~lp~~~t~~g~g~~~n~sP~-l~w~~~P~~tks~alim~DpDaP~~~~p~-~~~~HW~v~nIp   96 (184)
                      ..|+|++   ..|.+|+.|+.+++|++        |+ |+|++.|++ ++|+|+|+|||||++.+|. ++|+||+++|||
T Consensus        26 ~~l~v~~~~~~~v~~G~~l~~~~~~~~--------P~~l~~~~~~~~-~~ytlvm~DpDaP~~~~p~~~~~~HWlv~nIp   96 (190)
T 2iqy_A           26 HALRVDYGGVTVDELGKVLTPTQVMNR--------PSSISWDGLDPG-KLYTLVLTDPDAPSRKDPKFREWHHFLVVNMK   96 (190)
T ss_dssp             EECEEECSSCBCCSTTEECCGGGGSSC--------CSEEECTTCCTT-SEEEEEEEESSSSCSSSCTTCCEEEEEEEEEE
T ss_pred             ceEEEEECCCcccCCCCEECHHHHhCC--------CceEEEccCCCC-CEEEEEEECCCCCCCCCCCcCCEEEEEEeCCC
Confidence            3799999   67999999999999864        99 999999977 9999999999999988777 689999999999


Q ss_pred             CCCCCCCCCCCCCcccccCcccCeeeecCCCCCCCccCCCCCCC--CceEEEEEEeeCCcCCCC
Q 029999           97 PTLKGLPEGFSGKEEEIGGEYAGIKEGNNDWKVPGWRGPKLPNH--GHRFQFKLYALDDEMHLG  158 (184)
Q Consensus        97 ~~~~~l~~g~~~~~~~~~~~~~g~~~g~n~~g~~~Y~GP~Pp~g--~HrY~f~vyAl~~~l~l~  158 (184)
                      ++  .|++|.                     ...+|.|||||.|  .|||+|+||||+.+|+++
T Consensus        97 ~~--~~~~G~---------------------~~~~Y~gP~Pp~g~g~HRY~f~ly~q~~~l~~~  137 (190)
T 2iqy_A           97 GN--DISSGT---------------------VLSEYVGSGPPKDTGLHRYVWLVYEQEQPLNCD  137 (190)
T ss_dssp             TT--BGGGSE---------------------EEECCCCCCCCTTSCCEEEEEEEEECSSCCCCC
T ss_pred             hh--ccccCc---------------------cccceeCCCCcCCCCceEEEEEEEEeCCccCcc
Confidence            86  454431                     1468999999976  699999999999887664

>2jyz_A CG7054-PA, GH14779P, PEBP; PEBP/RKIP, molecular modeling, chemical shift variations, titration, unknown function; NMR {Drosophila melanogaster}

Probab=99.95  E-value=2.1e-28  Score=195.16  Aligned_cols=105  Identities=25%  Similarity=0.502  Sum_probs=91.0

Q ss_pred             ccEEEcC---CCCCCCCCCcccccCCCCCCCCCcCeeEeccCCCCceEEEEEEecCCCCCCCCCC-cceEEEEEEccCCC
Q 029999           23 EFRLVSP---EINHQGRLPRKYTNEGQGAKKNISPRLEWYNVPEGTKSLALVVEDIDAPDPSGPI-VPWTHWVVVNIPPT   98 (184)
Q Consensus        23 ~~~l~S~---~f~~g~~lp~~~t~~g~g~~~n~sP~l~w~~~P~~tks~alim~DpDaP~~~~p~-~~~~HW~v~nIp~~   98 (184)
                      .|+|+++   .+.+|..|+.++++.        +|+|+|++.|++|++|+|+|+|||||++.++. ++|+||+++|||++
T Consensus        16 ~l~V~y~~~~~v~~G~~l~~~~~~~--------~P~l~~~~~p~~t~~ytlvm~DpDaP~~~~p~~~~~~HWlv~nIp~~   87 (179)
T 2jyz_A           16 TIKVIYGDDLEVKQGNELTPTQVKD--------QPIVSWSGLEGKSNLLTLLMVDPDAPTRQDPKYREILHWSVVNIPGS   87 (179)
T ss_dssp             ECEEESSSSCCBCTTEECCSSCTTS--------CCEEECTTTCCSCSEEEEEEECCCSSCTTCCSSCCCSCCEEECCCTT
T ss_pred             eEEEEECCCcccCCCCEeCHHHhcc--------CCeEEEeCCCCCceeEEEEEeCCCCCCCccCCCccEEEEEEECCCCC
Confidence            7999985   588999999988753        69999999999999999999999999987776 78999999999998


Q ss_pred             CCCCCCCCCCCcccccCcccCeeeecCCCCCCCccCCCCCCC--CceEEEEEEeeCCcCC
Q 029999           99 LKGLPEGFSGKEEEIGGEYAGIKEGNNDWKVPGWRGPKLPNH--GHRFQFKLYALDDEMH  156 (184)
Q Consensus        99 ~~~l~~g~~~~~~~~~~~~~g~~~g~n~~g~~~Y~GP~Pp~g--~HrY~f~vyAl~~~l~  156 (184)
                      .+.|++|.                     ...+|.|||||.|  .|||+|+||||+++|+
T Consensus        88 ~~~l~~g~---------------------~~~~Y~gP~Pp~g~g~HRY~f~ly~q~~~l~  126 (179)
T 2jyz_A           88 NENPSGGH---------------------SLADYVGSGPPKDTGLHRYIFLLYRQENKIE  126 (179)
T ss_dssp             SSSTTSSE---------------------EEECCCSCCSCGGGCSEEEEEEEEEECSCCC
T ss_pred             ccccCccc---------------------ccccccCCCCCCCCCceEEEEEEEEcCCcCC
Confidence            76665542                     1368999999975  6999999999998776

>3axy_A Protein heading DATE 3A; phosphatidylethanolamine-binding protein, 14-3-3 protein, BZ protein, floral induction; HET: SEP; 2.40A {Oryza sativa japonica group} PDB: 1wkp_A

Probab=99.95  E-value=6.1e-28  Score=191.09  Aligned_cols=107  Identities=25%  Similarity=0.337  Sum_probs=87.9

Q ss_pred             ccEEEcCCCCCCCCCCcccccCCCCCCCCCcCeeEeccCCCCceEEEEEEecCCCCCCCCCC-cceEEEEEEccCCCCCC
Q 029999           23 EFRLVSPEINHQGRLPRKYTNEGQGAKKNISPRLEWYNVPEGTKSLALVVEDIDAPDPSGPI-VPWTHWVVVNIPPTLKG  101 (184)
Q Consensus        23 ~~~l~S~~f~~g~~lp~~~t~~g~g~~~n~sP~l~w~~~P~~tks~alim~DpDaP~~~~p~-~~~~HW~v~nIp~~~~~  101 (184)
                      .++..|..+.+|+.|+.+++        +.+|+|+|++.|+ +++|+|+|+|||||++.++. ++|+||+++|||++.+.
T Consensus        31 ~v~y~s~~v~~G~~l~~~~~--------~~~P~l~~~~~~~-~~~ytlvm~DpDaP~~~~p~~~~~~HWlv~nIp~~~~~  101 (170)
T 3axy_A           31 KVTYGSKTVSNGLELKPSMV--------THQPRVEVGGNDM-RTFYTLVMVDPDAPSPSDPNLREYLHWLVTDIPGTTAA  101 (170)
T ss_dssp             EEEETTEECCTTEECCGGGS--------SSCCEEEECCSCT-TCEEEEEEEETTCSCTTSCTTCSEEEEEEEEEETTSBG
T ss_pred             EEEECCeEcCCCCEeCHHHh--------CcCCeEEEeCCCC-CcEEEEEEECCCCCCCccCCCccEEEEEEeCCCCCccc
Confidence            34445677899999999886        5799999999986 59999999999999987776 68999999999986421


Q ss_pred             CCCCCCCCcccccCcccCeeeecCCCCCCCccCCCCCCCCceEEEEEEeeCCcCCCCCc
Q 029999          102 LPEGFSGKEEEIGGEYAGIKEGNNDWKVPGWRGPKLPNHGHRFQFKLYALDDEMHLGNK  160 (184)
Q Consensus       102 l~~g~~~~~~~~~~~~~g~~~g~n~~g~~~Y~GP~Pp~g~HrY~f~vyAl~~~l~l~~~  160 (184)
                       ..              |.       ...+|.|||||.|.|||+|+||||+.++++++.
T Consensus       102 -~~--------------G~-------~~~~Y~gP~Pp~G~HRY~f~ly~q~~~l~~~~p  138 (170)
T 3axy_A          102 -SF--------------GQ-------EVMSYESPRPTMGIHRLVFVLFQQLGRQTVYAP  138 (170)
T ss_dssp             -GG--------------SE-------EEECCCCCCCCSSCEEEEEEEEECSSCCCCCCC
T ss_pred             -cC--------------Cc-------eeceecCCCCCCCcEEEEEEEEecCCccCCCCc
Confidence             00              10       146899999999999999999999998877643

>1wko_A Terminal flower 1 protein; CIS-peptide, PEBP, signaling protein; 1.80A {Arabidopsis thaliana} PDB: 1qou_A

Probab=99.94  E-value=7.8e-27  Score=186.28  Aligned_cols=102  Identities=26%  Similarity=0.360  Sum_probs=84.9

Q ss_pred             EcCCCCCCCCCCcccccCCCCCCCCCcCeeEeccCCCCceEEEEEEecCCCCCCCCCC-cceEEEEEEccCCCCCCCCCC
Q 029999           27 VSPEINHQGRLPRKYTNEGQGAKKNISPRLEWYNVPEGTKSLALVVEDIDAPDPSGPI-VPWTHWVVVNIPPTLKGLPEG  105 (184)
Q Consensus        27 ~S~~f~~g~~lp~~~t~~g~g~~~n~sP~l~w~~~P~~tks~alim~DpDaP~~~~p~-~~~~HW~v~nIp~~~~~l~~g  105 (184)
                      .|..+.+|..|+.+.+.        .+|+|+|++.|+++ +|+|+|+|||||++.+|. ++|+||+++|||++... .. 
T Consensus        39 ~s~~v~~G~~l~~~~~~--------~~P~l~~~~~~~~~-~ytlvm~DPDaP~~~~p~~~~~~HWlv~nIp~~~~~-~~-  107 (180)
T 1wko_A           39 NKKQVSNGHELFPSSVS--------SKPRVEIHGGDLRS-FFTLVMIDPDVPGPSDPFLKEHLHWIVTNIPGTTDA-TF-  107 (180)
T ss_dssp             TTEECCTTCBCCGGGGS--------SCCEEEEESSCTTC-EEEEEEEECSCSBTTBCTTCCEEEEEEEEEETTSBG-GG-
T ss_pred             CCeEcCCCCCcCHHHhC--------cCCeEEEecCCCCc-eEEEEEeCCCCCCCccCCCccEEEEEEeccCcCccc-cC-
Confidence            35567888999888764        38999999999887 999999999999987776 78999999999987432 11 


Q ss_pred             CCCCcccccCcccCeeeecCCCCCCCccCCCCCCCCceEEEEEEeeCCcCCCCC
Q 029999          106 FSGKEEEIGGEYAGIKEGNNDWKVPGWRGPKLPNHGHRFQFKLYALDDEMHLGN  159 (184)
Q Consensus       106 ~~~~~~~~~~~~~g~~~g~n~~g~~~Y~GP~Pp~g~HrY~f~vyAl~~~l~l~~  159 (184)
                                   |       .+..+|.|||||.|.|||+|+||||+.++++++
T Consensus       108 -------------G-------~~~~~Y~gP~Pp~G~HRYvf~ly~q~~~l~~~~  141 (180)
T 1wko_A          108 -------------G-------KEVVSYELPRPSIGIHRFVFVLFRQKQRRVIFP  141 (180)
T ss_dssp             -------------S-------EEEECCCCCCCCSSCEEEEEEEEECCTTCCCCC
T ss_pred             -------------C-------ceeeeeCCCCCCCCceEEEEEEEecCCccCCCC
Confidence                         1       135789999999999999999999998887764

>2gzq_A Phosphatidylethanolamine-binding protein; structural genomics, PSI, protein structure initiative; HET: MSE; 1.30A {Plasmodium vivax} PDB: 2r77_A

Probab=99.92  E-value=3.1e-25  Score=179.71  Aligned_cols=102  Identities=25%  Similarity=0.382  Sum_probs=82.5

Q ss_pred             CCCCCCCCCcccccCCCCCCCCCcCe-eEeccCCCCceEEEEEEecCCCCCCCCCC-cceEEEEEEccCCCCCCCCCCCC
Q 029999           30 EINHQGRLPRKYTNEGQGAKKNISPR-LEWYNVPEGTKSLALVVEDIDAPDPSGPI-VPWTHWVVVNIPPTLKGLPEGFS  107 (184)
Q Consensus        30 ~f~~g~~lp~~~t~~g~g~~~n~sP~-l~w~~~P~~tks~alim~DpDaP~~~~p~-~~~~HW~v~nIp~~~~~l~~g~~  107 (184)
                      .+.+|..|+.+.+.        .+|+ |+|++.|+++++|+|+|+|||||++.++. ++|+||+++|||++  .+++|..
T Consensus        48 ~v~~G~~l~~~~~~--------~~P~~l~~~~~~~~~~~ytLvm~DPDaP~~~~~~~~~~~HWlv~nIp~~--~~~~g~~  117 (200)
T 2gzq_A           48 EVNHGNILDLAGTG--------SVPRNIKFSEEPPEDYCYILFMIDPDFPSRRRPDGRDYVHWAVSGIKSK--ELVKGTD  117 (200)
T ss_dssp             EECSSCEEESTTCS--------SCCSEEEESSCCCTTEEEEEEEEETTCSCSSCCTTCSEEEEEEEEECSS--EEETTCC
T ss_pred             ccCCCCEeCHHHHh--------CCCceEEEccCCCCCceEEEEEECCCCCCCCCCCCCCEEEEEEeCCCcC--cccCCcc
Confidence            46778878776553        4899 99999999999999999999999987776 78999999999986  3555432


Q ss_pred             CCcccccCcccCeeeecCCCCCCCccCCCCCCC--CceEEEEEE--eeCCcCCC
Q 029999          108 GKEEEIGGEYAGIKEGNNDWKVPGWRGPKLPNH--GHRFQFKLY--ALDDEMHL  157 (184)
Q Consensus       108 ~~~~~~~~~~~g~~~g~n~~g~~~Y~GP~Pp~g--~HrY~f~vy--Al~~~l~l  157 (184)
                                      .|+.+..+|.|||||.|  .|||+|+||  +|+.++++
T Consensus       118 ----------------~~~~~~~~Y~gP~Pp~g~g~HRYvF~l~~fkQ~~~~~~  155 (200)
T 2gzq_A          118 ----------------KNCITLLPYVGPSIKKGTGLHRISFILSLVKEENKGNV  155 (200)
T ss_dssp             ----------------TTCEEEECCCCCCCCTTSCCEEEEEEEEEEEGGGTTCB
T ss_pred             ----------------CCCcceeeeeCCCCcCCCCcceEEEEEEEecccCcccc
Confidence                            23345679999999976  699999986  99876654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	184
d1fjja_	159	b.17.1.2 (A:) Hypothetical protein YbhB {Escherich	4e-50
d1fuxa_	165	b.17.1.2 (A:) Hypothetical protein YbcL {Escherich	8e-46
d1wpxb1	219	b.17.1.1 (B:501-719) Carboxypeptidase Y inhibitor	1e-13
d1a44a_	185	b.17.1.1 (A:) Phosphatidylethanolamine binding pro	5e-06
d1qoua_	164	b.17.1.1 (A:) Centroradialis protein Cen {Garden s	6e-06

>d1fjja_ b.17.1.2 (A:) Hypothetical protein YbhB {Escherichia coli [TaxId: 562]} Length = 159

class: All beta proteins
fold: PEBP-like
superfamily: PEBP-like
family: Prokaryotic PEBP-like proteins
domain: Hypothetical protein YbhB
species: Escherichia coli [TaxId: 562]

 Score =  157 bits (397), Expect = 4e-50
 Identities = 54/164 (32%), Positives = 80/164 (48%), Gaps = 10/164 (6%)

Query: 24  FRLVSPEINHQGRLPRKYTNEGQGAK-KNISPRLEWYNVPEGTKSLALVVEDIDAPDPSG 82
            +L+S ++    +LP ++   G G    NISP L W +VP GTKS  +   D DAP  SG
Sbjct: 2   MKLISNDLRDGDKLPHRHVFNGMGYDGDNISPHLAWDDVPAGTKSFVVTCYDPDAPTGSG 61

Query: 83  PIVPWTHWVVVNIPPTLKGLPEGFSGKEEEIGGEYAGIKEGNNDWKVPGWRGPKLP-NHG 141
               W HWVVVN+P   + LP+GF      +     G+ +   D+   G+ G   P    
Sbjct: 62  ----WWHWVVVNLPADTRVLPQGFGSGLVAMP---DGVLQTRTDFGKTGYDGAAPPKGET 114

Query: 142 HRFQFKLYALDDEM-HLGNKVTKERLLEAIEGHVLGEAVLTAIF 184
           HR+ F ++ALD E   +    +   +   +  H L  A +TA+F
Sbjct: 115 HRYIFTVHALDIERIDVDEGASGAMVGFNVHFHSLASASITAMF 158

>d1fuxa_ b.17.1.2 (A:) Hypothetical protein YbcL {Escherichia coli [TaxId: 562]} Length = 165

class: All beta proteins
fold: PEBP-like
superfamily: PEBP-like
family: Prokaryotic PEBP-like proteins
domain: Hypothetical protein YbcL
species: Escherichia coli [TaxId: 562]

 Score =  146 bits (369), Expect = 8e-46
 Identities = 55/166 (33%), Positives = 80/166 (48%), Gaps = 10/166 (6%)

Query: 23  EFRLVSPEINHQGRLPRKYTNEGQGAK-KNISPRLEWYNVPEGTKSLALVVEDIDAPDPS 81
           EF++ S EI    +L   +   G G +  N SP L W  VPEGTKS A+ V D DAP  S
Sbjct: 1   EFQVTSNEIKTGEQLTTSHVFSGFGCEGGNTSPSLTWSGVPEGTKSFAVTVYDPDAPTGS 60

Query: 82  GPIVPWTHWVVVNIPPTLKGLPEGFSGKEEEIGGEYAGIKEGNNDWKVPGWRGPKLPNHG 141
           G    W HW VVNIP T+  LP     ++        G  +G ND+   G+ G   P   
Sbjct: 61  G----WWHWTVVNIPATVTYLPVDAGRRDG--TKLPTGAVQGRNDFGYAGFGGACPPKGD 114

Query: 142 --HRFQFKLYALDDEM-HLGNKVTKERLLEAIEGHVLGEAVLTAIF 184
             H +QFK++AL  E   + +  +   +   +  + +  A +T ++
Sbjct: 115 KPHHYQFKVWALKTEKIPVDSNSSGALVGYMLNANKIATAEITPVY 160

>d1wpxb1 b.17.1.1 (B:501-719) Carboxypeptidase Y inhibitor {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 219

class: All beta proteins
fold: PEBP-like
superfamily: PEBP-like
family: Phosphatidylethanolamine binding protein
domain: Carboxypeptidase Y inhibitor
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 64.4 bits (156), Expect = 1e-13
 Identities = 22/105 (20%), Positives = 32/105 (30%), Gaps = 8/105 (7%)

Query: 53  SPRLEWYNVPEGTKSLALVVEDIDAPDPSGPI-VPWTHWVVVNIPPTLKGLPEGFSGKEE 111
           S       VP+      LV+ D DAP  +      + H V  ++    +   E     E 
Sbjct: 74  SVPQANAYVPQDDDLFTLVMTDPDAPSKTDHKWSEFCHLVECDLKLLNEATHETSGATEF 133

Query: 112 EIGGEYAGIKEGNNDWKVPGWRGPKLP-NHG-HRFQFKLYALDDE 154
                            +  + GP  P   G HR+ F LY     
Sbjct: 134 FASE-----FNTKGSNTLIEYMGPAPPKGSGPHRYVFLLYKQPKG 173

>d1a44a_ b.17.1.1 (A:) Phosphatidylethanolamine binding protein, PEBP {Cow (Bos taurus) [TaxId: 9913]} Length = 185

class: All beta proteins
fold: PEBP-like
superfamily: PEBP-like
family: Phosphatidylethanolamine binding protein
domain: Phosphatidylethanolamine binding protein, PEBP
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 42.6 bits (100), Expect = 5e-06
 Identities = 26/118 (22%), Positives = 41/118 (34%), Gaps = 27/118 (22%)

Query: 54  PRLEWYNVPEGTKSLALVVEDIDAPDPSGPIV-PWTHWVVVNIPPTLKGLPEGFSGKEEE 112
           P    ++  +  K   LV+ D DAP    P    W H++VVN+           +     
Sbjct: 49  PTSITWDGLDPGKLYTLVLTDPDAPSRKDPKYREWHHFLVVNMKGN--------NISSGT 100

Query: 113 IGGEYAGIKEGNNDWKVPGWRGPKLPNHGHRFQFKLYALD-----DEMHLGNKVTKER 165
           +  +Y G          P   G       HR+ + +Y  +     DE  L N+    R
Sbjct: 101 VLSDYVGSGP-------PKGTGL------HRYVWLVYEQEGPLKCDEPILSNRSGDHR 145

>d1qoua_ b.17.1.1 (A:) Centroradialis protein Cen {Garden snapdragon (Antirrhinum majus) [TaxId: 4151]} Length = 164

class: All beta proteins
fold: PEBP-like
superfamily: PEBP-like
family: Phosphatidylethanolamine binding protein
domain: Centroradialis protein Cen
species: Garden snapdragon (Antirrhinum majus) [TaxId: 4151]

 Score = 42.3 bits (99), Expect = 6e-06
 Identities = 23/102 (22%), Positives = 36/102 (35%), Gaps = 24/102 (23%)

Query: 54  PRLEWYNVPEGTKSLALVVEDIDAPDPSGPI-VPWTHWVVVNIPPTLKGLPEGFSGKEEE 112
           PR+E +   +      L++ D D P PS P      HW+V +IP T              
Sbjct: 45  PRVEVHG-GDMRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGT-------------- 89

Query: 113 IGGEYAGIKEGNNDWKVPGWRGPKLPNHGHRFQFKLYALDDE 154
                    + +   +V  +  P+     HRF F L+     
Sbjct: 90  --------TDSSFGKEVVSYEMPRPNIGIHRFVFLLFKQKKR 123

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	184
d1fjja_	159	Hypothetical protein YbhB {Escherichia coli [TaxId	100.0
d1fuxa_	165	Hypothetical protein YbcL {Escherichia coli [TaxId	100.0
d1wpxb1	219	Carboxypeptidase Y inhibitor {Baker's yeast (Sacch	99.85
d1a44a_	185	Phosphatidylethanolamine binding protein, PEBP {Co	99.75
d1qoua_	164	Centroradialis protein Cen {Garden snapdragon (Ant	99.74

>d1fjja_ b.17.1.2 (A:) Hypothetical protein YbhB {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: PEBP-like
superfamily: PEBP-like
family: Prokaryotic PEBP-like proteins
domain: Hypothetical protein YbhB
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=3.6e-53  Score=331.04  Aligned_cols=155  Identities=34%  Similarity=0.608  Sum_probs=142.2

Q ss_pred             ccEEEcCCCCCCCCCCcccccCCCCC-CCCCcCeeEeccCCCCceEEEEEEecCCCCCCCCCCcceEEEEEEccCCCCCC
Q 029999           23 EFRLVSPEINHQGRLPRKYTNEGQGA-KKNISPRLEWYNVPEGTKSLALVVEDIDAPDPSGPIVPWTHWVVVNIPPTLKG  101 (184)
Q Consensus        23 ~~~l~S~~f~~g~~lp~~~t~~g~g~-~~n~sP~l~w~~~P~~tks~alim~DpDaP~~~~p~~~~~HW~v~nIp~~~~~  101 (184)
                      .|+|+||+|++|+.||.+|||+|.++ |+|+||+|+|+++|++||||||+|+|+|+|.+.    .|+||++||||+++++
T Consensus         1 ~m~ltS~~f~~g~~iP~~~t~~~~~~~G~n~SP~l~w~~~P~~tks~ali~~D~dap~~~----~~~HW~~~nIp~~~~~   76 (159)
T d1fjja_           1 AMKLISNDLRDGDKLPHRHVFNGMGYDGDNISPHLAWDDVPAGTKSFVVTCYDPDAPTGS----GWWHWVVVNLPADTRV   76 (159)
T ss_dssp             CCEEECSSCCTTSBCCGGGBCSSTTCCCCCCCCCEEEECCCTTCCEEEEEEEETTSTTTT----CEEEEEEEEEETTCCE
T ss_pred             CeEEECCccCCcCCCCHHHhcCCCCCCCCccCceEEecCCCCCCeEEEEEEECCCCCCCC----CceEEEEEccCCCccc
Confidence            48999999999999999999998875 789999999999999999999999999998754    5999999999999999


Q ss_pred             CCCCCCCCcccccCcccCeeeecCCCCCCCccCCCCCCC-CceEEEEEEeeC-CcCCCCCcccHHHHHHHHhcCeeEEEE
Q 029999          102 LPEGFSGKEEEIGGEYAGIKEGNNDWKVPGWRGPKLPNH-GHRFQFKLYALD-DEMHLGNKVTKERLLEAIEGHVLGEAV  179 (184)
Q Consensus       102 l~~g~~~~~~~~~~~~~g~~~g~n~~g~~~Y~GP~Pp~g-~HrY~f~vyAl~-~~l~l~~~~~~~~l~~a~~~hvl~~~~  179 (184)
                      |++|+.....   ..+.|.+||.|+++..+|.|||||.| .|||+|+||||| ++|+|++++++++|+++|++|+|++++
T Consensus        77 l~~g~~~~~~---~~~~g~~~g~n~~g~~~Y~gPcPP~g~~H~Y~f~vyALd~~~l~l~~~~~~~~l~~ai~g~vl~~a~  153 (159)
T d1fjja_          77 LPQGFGSGLV---AMPDGVLQTRTDFGKTGYDGAAPPKGETHRYIFTVHALDIERIDVDEGASGAMVGFNVHFHSLASAS  153 (159)
T ss_dssp             ECTTGGGTSS---CCCTTCEECBCTTSSBSCCCBCCSTTCCEEEEEEEEEESSSCCSCCTTCCHHHHHHHHHHHEEEEEE
T ss_pred             ccccccCccc---cCCCccEEecccCCCcceeCCCCcCCCcEEEEEEEEEecCccCCCCCCCCHHHHHHHHhhCEEEEEE
Confidence            9999754322   23467899999999999999999998 699999999999 689999999999999999999999999


Q ss_pred             EEEEC
Q 029999          180 LTAIF  184 (184)
Q Consensus       180 l~g~y  184 (184)
                      |+|+|
T Consensus       154 l~g~Y  158 (159)
T d1fjja_         154 ITAMF  158 (159)
T ss_dssp             EEEEE
T ss_pred             EEEEE
Confidence            99998

>d1fuxa_ b.17.1.2 (A:) Hypothetical protein YbcL {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: PEBP-like
superfamily: PEBP-like
family: Prokaryotic PEBP-like proteins
domain: Hypothetical protein YbcL
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=5.3e-51  Score=320.45  Aligned_cols=156  Identities=34%  Similarity=0.575  Sum_probs=138.7

Q ss_pred             ccEEEcCCCCCCCCCCcccccCCCCC-CCCCcCeeEeccCCCCceEEEEEEecCCCCCCCCCCcceEEEEEEccCCCCCC
Q 029999           23 EFRLVSPEINHQGRLPRKYTNEGQGA-KKNISPRLEWYNVPEGTKSLALVVEDIDAPDPSGPIVPWTHWVVVNIPPTLKG  101 (184)
Q Consensus        23 ~~~l~S~~f~~g~~lp~~~t~~g~g~-~~n~sP~l~w~~~P~~tks~alim~DpDaP~~~~p~~~~~HW~v~nIp~~~~~  101 (184)
                      +|+|+|++|++|+.||.+|+|++.+| |+|+||+|+|+++|++||||||+|+|+|+|.+.    .|+||++||||++++.
T Consensus         1 ~f~ltS~~f~~g~~ip~~~~~~~~tc~G~n~SP~L~w~~~P~gtks~ali~~D~Dap~~~----~~~HWlv~nIp~~~~~   76 (165)
T d1fuxa_           1 EFQVTSNEIKTGEQLTTSHVFSGFGCEGGNTSPSLTWSGVPEGTKSFAVTVYDPDAPTGS----GWWHWTVVNIPATVTY   76 (165)
T ss_dssp             CCEEECSSCCTTSBCCGGGBCEETTEECCCCCCCEEEECCCTTCCEEEEEEEETTSTTTT----CEEEEEEEEEETTCCE
T ss_pred             CeEEEcCCcCCcCCCCHhHhccCCCCCCCccCccEEecCCCCCCeEEEEEEeCCCCCCCC----cceEEEEEccCccccc
Confidence            59999999999999999976554443 479999999999999999999999999998764    5999999999999999


Q ss_pred             CCCCCCCCcccccCcccCeeeecCCCCCCCccCCCCCCC--CceEEEEEEeeC-CcCCCCCcccHHHHHHHHhcCeeEEE
Q 029999          102 LPEGFSGKEEEIGGEYAGIKEGNNDWKVPGWRGPKLPNH--GHRFQFKLYALD-DEMHLGNKVTKERLLEAIEGHVLGEA  178 (184)
Q Consensus       102 l~~g~~~~~~~~~~~~~g~~~g~n~~g~~~Y~GP~Pp~g--~HrY~f~vyAl~-~~l~l~~~~~~~~l~~a~~~hvl~~~  178 (184)
                      |++|.......  ..+.|+++|.|+++..+|.|||||.|  .|||+|+||||+ ++|++++++++++|.++|++|+|+++
T Consensus        77 l~~~~~~~~~~--~~~~g~~~g~n~~g~~~Y~gP~PP~G~~~H~Y~f~vyAL~~~~l~l~~~~~~~~l~~ai~g~vl~~a  154 (165)
T d1fuxa_          77 LPVDAGRRDGT--KLPTGAVQGRNDFGYAGFGGACPPKGDKPHHYQFKVWALKTEKIPVDSNSSGALVGYMLNANKIATA  154 (165)
T ss_dssp             ECTTTTCTTCT--TSCTTCEECCCTTSSSSCCCBCCCTTCCCEECEEEEEEESCSCCCCCTTCCHHHHHHHHHTTEEEEE
T ss_pred             cccCcCccccc--cCCCCeEEecccCCCcCCCCCCCcCCCCcEEEEEEEEEcCCccCCCCCCCCHHHHHHHHhhCEEEEE
Confidence            99987643321  24567899999999999999999976  799999999999 57999999999999999999999999


Q ss_pred             EEEEEC
Q 029999          179 VLTAIF  184 (184)
Q Consensus       179 ~l~g~y  184 (184)
                      +|+|+|
T Consensus       155 ~l~g~Y  160 (165)
T d1fuxa_         155 EITPVY  160 (165)
T ss_dssp             EECCEE
T ss_pred             EEEEEE
Confidence            999998

>d1wpxb1 b.17.1.1 (B:501-719) Carboxypeptidase Y inhibitor {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: PEBP-like
superfamily: PEBP-like
family: Phosphatidylethanolamine binding protein
domain: Carboxypeptidase Y inhibitor
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.85  E-value=9.8e-22  Score=158.93  Aligned_cols=113  Identities=21%  Similarity=0.335  Sum_probs=77.7

Q ss_pred             CCCCCCCCcccccCCCCCCCCCcCeeEecc--------------CCCCceEEEEEEecCCCCCCCCCC-cceEEEEEEcc
Q 029999           31 INHQGRLPRKYTNEGQGAKKNISPRLEWYN--------------VPEGTKSLALVVEDIDAPDPSGPI-VPWTHWVVVNI   95 (184)
Q Consensus        31 f~~g~~lp~~~t~~g~g~~~n~sP~l~w~~--------------~P~~tks~alim~DpDaP~~~~p~-~~~~HW~v~nI   95 (184)
                      +..|..|+..-+.        ..|.|+|..              .+++.+.|+|+|+|||||++.++. ++|+||+++||
T Consensus        46 V~~G~~l~p~~t~--------~~P~i~~~~~~~~~~~~~~~~~~~~~~~~~ytlvm~DPDaP~~~~~~~~~~~HWlv~ni  117 (219)
T d1wpxb1          46 VAMGNTLPTEKAR--------SKPQFQFTFNKQMQKSVPQANAYVPQDDDLFTLVMTDPDAPSKTDHKWSEFCHLVECDL  117 (219)
T ss_dssp             ECSSCBCCGGGGS--------SCCEEEEEEETTCC------CCCCCCSSCCEEEEEEESSSSCSSCCTTCSEEEEEEEEE
T ss_pred             cCCCCEeCHHHhc--------cCCEEEEecCccccccccccccccCCCCCeEEEEEECCCCCCCCCCCcceEEEEEEecC
Confidence            5667777665553        358888853              345678899999999999988777 88999999999


Q ss_pred             CCCCCCCCCCCCCCcccccCcccCeeeecCCCCCCCccCCCCCCC--CceEEEEEEeeCCcCC
Q 029999           96 PPTLKGLPEGFSGKEEEIGGEYAGIKEGNNDWKVPGWRGPKLPNH--GHRFQFKLYALDDEMH  156 (184)
Q Consensus        96 p~~~~~l~~g~~~~~~~~~~~~~g~~~g~n~~g~~~Y~GP~Pp~g--~HrY~f~vyAl~~~l~  156 (184)
                      |.+...+.++......     ..+.....+......|.|||||.|  .|||+|+||+|+..++
T Consensus       118 p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~Y~gP~Pp~gtg~HRYvf~l~~Q~~~~~  175 (219)
T d1wpxb1         118 KLLNEATHETSGATEF-----FASEFNTKGSNTLIEYMGPAPPKGSGPHRYVFLLYKQPKGVD  175 (219)
T ss_dssp             EECC---------CCE-----EEEEEECTTCEEEECCCCCCCCTTSCCEEEEEEEEECCTTCC
T ss_pred             CccccccccccCcccc-----CcccccccCCceeecccCCCCCCCCCceEEEEEEEEccCCCC
Confidence            9876555444322111     112233444445678999999986  6999999999986554

>d1a44a_ b.17.1.1 (A:) Phosphatidylethanolamine binding protein, PEBP {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: PEBP-like
superfamily: PEBP-like
family: Phosphatidylethanolamine binding protein
domain: Phosphatidylethanolamine binding protein, PEBP
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.75  E-value=1.9e-18  Score=136.43  Aligned_cols=94  Identities=23%  Similarity=0.444  Sum_probs=70.3

Q ss_pred             CCCCCCCcccccCCCCCCCCCcC-eeEeccCCCCceEEEEEEecCCCCCCCCCC-cceEEEEEEccCCCCCCCCCCCCCC
Q 029999           32 NHQGRLPRKYTNEGQGAKKNISP-RLEWYNVPEGTKSLALVVEDIDAPDPSGPI-VPWTHWVVVNIPPTLKGLPEGFSGK  109 (184)
Q Consensus        32 ~~g~~lp~~~t~~g~g~~~n~sP-~l~w~~~P~~tks~alim~DpDaP~~~~p~-~~~~HW~v~nIp~~~~~l~~g~~~~  109 (184)
                      ..|..|...-+.        ..| .+.|.... ..+.|+|+|+|||+|++.++. ++|+||++.||+++.  +..|    
T Consensus        35 ~~G~~l~p~~~~--------~~P~~v~~~~~~-~~~~YtlvMvDPDaPs~~~~~~~e~lHWlv~Ni~~~~--~~~g----   99 (185)
T d1a44a_          35 ELGKVLTPTQVK--------NRPTSITWDGLD-PGKLYTLVLTDPDAPSRKDPKYREWHHFLVVNMKGNN--ISSG----   99 (185)
T ss_dssp             STTEECCTTTTS--------SCCSEEECTTCC-TTSEEEEEEEETTSSCSSSCTTCCEEEEEEEEEETTC--GGGS----
T ss_pred             CCCCEECHHHHh--------cCCceEEecCCC-CCCeEEEEEECCCCCCCCCCCcceEEEEEEeCCCCCc--CCCC----
Confidence            345556554432        246 48888754 457899999999999998888 899999999998752  1111    


Q ss_pred             cccccCcccCeeeecCCCCCCCccCCCCCCC--CceEEEEEEeeCCcCCC
Q 029999          110 EEEIGGEYAGIKEGNNDWKVPGWRGPKLPNH--GHRFQFKLYALDDEMHL  157 (184)
Q Consensus       110 ~~~~~~~~~g~~~g~n~~g~~~Y~GP~Pp~g--~HrY~f~vyAl~~~l~l  157 (184)
                                .       ....|.||.||.|  .|||+|.||+|+.++++
T Consensus       100 ----------~-------~l~~Y~~P~Pp~gtg~HRYvflLf~Q~~~~~~  132 (185)
T d1a44a_         100 ----------T-------VLSDYVGSGPPKGTGLHRYVWLVYEQEGPLKC  132 (185)
T ss_dssp             ----------E-------EEECCCCCCCCTTSCCEEEEEEEEECSSCCCC
T ss_pred             ----------e-------EeeeEecCcCCCCCCceEEEEEEEEccCCCCc
Confidence                      1       1367999999976  69999999999876654

>d1qoua_ b.17.1.1 (A:) Centroradialis protein Cen {Garden snapdragon (Antirrhinum majus) [TaxId: 4151]}

class: All beta proteins
fold: PEBP-like
superfamily: PEBP-like
family: Phosphatidylethanolamine binding protein
domain: Centroradialis protein Cen
species: Garden snapdragon (Antirrhinum majus) [TaxId: 4151]

Probab=99.74  E-value=3.3e-18  Score=132.29  Aligned_cols=93  Identities=27%  Similarity=0.375  Sum_probs=70.4

Q ss_pred             CCCCCCCcccccCCCCCCCCCcCeeEeccCCCCceEEEEEEecCCCCCCCCCC-cceEEEEEEccCCCCCCCCCCCCCCc
Q 029999           32 NHQGRLPRKYTNEGQGAKKNISPRLEWYNVPEGTKSLALVVEDIDAPDPSGPI-VPWTHWVVVNIPPTLKGLPEGFSGKE  110 (184)
Q Consensus        32 ~~g~~lp~~~t~~g~g~~~n~sP~l~w~~~P~~tks~alim~DpDaP~~~~p~-~~~~HW~v~nIp~~~~~l~~g~~~~~  110 (184)
                      ..|..|...-+.        ..|.++|+... ..+.|+|+|+|||+|++.++. ++|+||++.|||.+.. ...      
T Consensus        31 ~~G~~l~~~~t~--------~~P~v~~~~~~-~~~~YtlvMvDpDap~~~~~~~~~~lHWlv~nip~~~~-~~~------   94 (164)
T d1qoua_          31 YNGHELFPSAVT--------STPRVEVHGGD-MRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTD-SSF------   94 (164)
T ss_dssp             CTTCBCCGGGSS--------SCCEEEECCCC-TTCEEEEEEEECSCSCSSSCTTCCEEEEEEEEEETTSB-GGG------
T ss_pred             cCCCEeCHHHhc--------cCCEEEEecCC-CCceEEEEEECCCCCCCCCCccceEEEEEEecCCCCcc-ccC------
Confidence            446655554432        35889998754 457899999999999998877 8999999999987531 100      


Q ss_pred             ccccCcccCeeeecCCCCCCCccCCCCCCCCceEEEEEEeeCCcC
Q 029999          111 EEIGGEYAGIKEGNNDWKVPGWRGPKLPNHGHRFQFKLYALDDEM  155 (184)
Q Consensus       111 ~~~~~~~~g~~~g~n~~g~~~Y~GP~Pp~g~HrY~f~vyAl~~~l  155 (184)
                              +.       ....|.+|.|+.|.|||+|+||+|....
T Consensus        95 --------~~-------~~~~Y~~P~P~tG~HRYvflLf~Q~~~~  124 (164)
T d1qoua_          95 --------GK-------EVVSYEMPRPNIGIHRFVFLLFKQKKRG  124 (164)
T ss_dssp             --------SE-------EEECCCCCCCCSSCEEEEEEEEECSSCC
T ss_pred             --------Cc-------eecccCCCCCCCceeEEEEEEEEcCCCc
Confidence                    10       1367999999989999999999999643