Citrus Sinensis ID: 030046

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180---
Protein Sequence
MYAISWLPSFPINLARSRSRKLNKTQLHNRKRQINAMRAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDADADYVMQKKYGVLLVSQFTLYGILKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNPDAIKGKCAFQLHLVLRSFSFLYKSRLFILSRLFSMYKPWLGRSLYVLLSG
Secondary Structure (PSIPRED)
ccEEEccccccccHHHHHcccccHHHHHHccccccccEEEEEEEcccEEEEccEEEEEEccEEEEEEEccccccHHHHHHHHHccccEEEEEccccccccccccccccccccccccHHHHHHHHHHHHHHccccEEEEEEEEEEEEEEEEEEEEEEEcEEcccccccccccccccEEEEEEcc
Secondary Structure Prediction (SSPRO)
ccEEEccccccccccccccccccccHEccHHHHHcccEEEEEEEEEEEEEEccEEEEEEccEEEEEEEcEccccHHHHHHHHHHHHHcccEEEEEEEEccccccccHHHcccHHHHHHHHHHHHHHHHHcccccEEEEEccEEEEEEEccEEEEEccHHHHHHHHHHHcccHHcccEEEEccc
Coil and Loop (DISEMBL)
myaiswlpsfpinlaRSRSRKLNKTQLHNRKRQINAMRAVVQRVASASVEVEGRLVSEIGPGLLVLVGlhefdtdadadyVMQKKYGVLLVSQFTLYGilkgnkpdfhvamppqkakpfyDSLVDKFRksynpdaikgkcAFQLHLVLRSFSFLYKSRLFILSRLFSMYKPWLGRSLYVLLSG
Flexible Loop (DISEMBL)
myaiswlpsfpinlarsrsrklnktqlhnrkrqinamRAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDADADYVMQKKYGVLLVSQFTLYGILKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNPDAIKGKCAFQLHLVLRSFSFLYKSRLFILSRLFSMYKPWLGRSLYVLLSG
Low Complexity Region (SEG)
MYAISWLPSFPINLARSRSRKLNKTQLHNRKRQINAMravvqrvasasveveGRLVSEIGPGLLVLVGLHEFDTDADADYVMQKKYGVLLVSQFTLYGILKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNPDAIKGKCAFQLHLVLRSFSFLYKSRLFILSRLFSMYKPWLGRSLYVLLSG
Disordered region (IsUnstruct)
***ISWLPSFPIN********************INAMRAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDADADYVMQKKYGVLLVSQFTLYGILKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNPDAIKGKCAFQLHLVLRSFSFLYKSRLFILSRLFSMYKPWLGRSLYVLL**
Disordered Region (DISOPRED)
*YAISW*P**************************NAMRAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDADADYVMQKKYGVLLVSQFTLYGILKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNPDAIKGKCAFQLHLVLRSFSFLYKSRLFILSRLFSMYKPWLGRSLYVLLSG
Disordered Region (DISEMBL)
MYAISWLPSFPINLARSRSRKLNKTQLHNRKRQINAMRAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDADADYVMQKKYGVLLVSQFTLYGILKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNPDAIKGKCAFQLHLVLRSFSFLYKSRLFILSRLFSMYKPWLGRSLYVLLSG
Disordered Region (DISPRO)
MYAISWLPSFPINLARSRSRKLNKTQLHNRKRQINAMRAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDADADYVMQKKYGVLLVSQFTLYGILKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNPDAIKGKCAFQLHLVLRSFSFLYKSRLFILSRLFSMYKPWLGRSLYVLLS*
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MYAISWLPSFPINLARSRSRKLNKTQLHNRKRQINAMRAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDADADYVMQKKYGVLLVSQFTLYGILKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNPDAIKGKCAFQLHLVLRSFSFLYKSRLFILSRLFSMYKPWLGRSLYVLLSG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	183	2.2.26 [Sep-21-2011]
Q8TEA8	209	D-tyrosyl-tRNA(Tyr) deacy	yes	no	0.601	0.526	0.429	5e-22
Q9DD18	209	D-tyrosyl-tRNA(Tyr) deacy	yes	no	0.601	0.526	0.429	6e-22
Q2T9V8	209	D-tyrosyl-tRNA(Tyr) deacy	yes	no	0.601	0.526	0.422	4e-21
Q54EY1	151	D-tyrosyl-tRNA(Tyr) deacy	yes	no	0.551	0.668	0.403	3e-20
Q74FT1	152	D-tyrosyl-tRNA(Tyr) deacy	yes	no	0.606	0.730	0.380	5e-16
B0TF85	150	D-tyrosyl-tRNA(Tyr) deacy	yes	no	0.595	0.726	0.402	2e-15
Q24UQ3	149	D-tyrosyl-tRNA(Tyr) deacy	yes	no	0.502	0.617	0.421	3e-15
B8FQT8	149	D-tyrosyl-tRNA(Tyr) deacy	yes	no	0.502	0.617	0.421	3e-15
Q1DDE5	153	D-tyrosyl-tRNA(Tyr) deacy	yes	no	0.508	0.607	0.426	4e-15
C5CGW6	148	D-tyrosyl-tRNA(Tyr) deacy	yes	no	0.590	0.729	0.373	5e-15

>sp|Q8TEA8|DTD1_HUMAN D-tyrosyl-tRNA(Tyr) deacylase 1 OS=Homo sapiens GN=DTD1 PE=1 SV=2

 Score =  103 bits (258), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 58/135 (42%), Positives = 81/135 (60%), Gaps = 25/135 (18%)

Query: 37  MRAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDADADY---------------- 80
           M+AVVQRV  ASV V G  +S IG G+ VL+G+   DT  + ++                
Sbjct: 1   MKAVVQRVTRASVTVGGEQISAIGRGICVLLGISLEDTQKELEHMVRKILNLRVFEDESG 60

Query: 81  ------VMQKKYGVLLVSQFTLYGILKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNPD 134
                 VM K+Y +L VSQFTL  +LKGNKPDFH+AMP ++A+ FY+S +++ RK+Y P+
Sbjct: 61  KHWSKSVMDKQYEILCVSQFTLQCVLKGNKPDFHLAMPTEQAEGFYNSFLEQLRKTYRPE 120

Query: 135 AIK-GKCA--FQLHL 146
            IK GK     Q+H+
Sbjct: 121 LIKDGKFGAYMQVHI 135

Hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr). Could be a defense mechanism against a harmful effect of D-tyrosine.
Homo sapiens (taxid: 9606)
EC: 3EC: .EC: 1EC: .EC: -EC: .EC: -

>sp|Q9DD18|DTD1_MOUSE D-tyrosyl-tRNA(Tyr) deacylase 1 OS=Mus musculus GN=Dtd1 PE=1 SV=2

 Score =  103 bits (257), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 58/135 (42%), Positives = 81/135 (60%), Gaps = 25/135 (18%)

Query: 37  MRAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDADADY---------------- 80
           M+AVVQRV  ASV V G  +S IG G+ VL+G+   D+  + ++                
Sbjct: 1   MKAVVQRVTRASVTVGGEQISAIGRGICVLLGISMEDSQKELEHMVRKILNLRVFEDESG 60

Query: 81  ------VMQKKYGVLLVSQFTLYGILKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNPD 134
                 VM K+Y VL VSQFTL  +LKGNKPDFH+AMP ++A+ FY+S +++ RKSY P+
Sbjct: 61  KHWSKSVMDKEYEVLCVSQFTLQCVLKGNKPDFHLAMPTEQAESFYNSFLEQLRKSYRPE 120

Query: 135 AIK-GKCA--FQLHL 146
            I+ GK     Q+H+
Sbjct: 121 LIRDGKFGAYMQVHI 135

Hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr). Could be a defense mechanism against a harmful effect of D-tyrosine.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 1

EC: .

EC: -

EC: .

EC: -

>sp|Q2T9V8|DTD1_BOVIN D-tyrosyl-tRNA(Tyr) deacylase 1 OS=Bos taurus GN=DTD1 PE=2 SV=1

 Score =  100 bits (250), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 57/135 (42%), Positives = 79/135 (58%), Gaps = 25/135 (18%)

Query: 37  MRAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDADADY---------------- 80
           M+AVVQRV  ASV V G  +S IG G+ VL+G+   DT  + ++                
Sbjct: 1   MKAVVQRVTRASVTVGGEQISAIGRGICVLLGISLEDTQKELEHMVRKILNLRVFEDESG 60

Query: 81  ------VMQKKYGVLLVSQFTLYGILKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNPD 134
                 VM K+Y VL VSQFTL  +LKGNKPDFH+AMP ++A+ FY   +++ RK+Y P+
Sbjct: 61  KHWSKSVMDKQYEVLCVSQFTLQCVLKGNKPDFHLAMPAEQAESFYKGFLEQLRKAYRPE 120

Query: 135 AIK-GKCA--FQLHL 146
            +K GK     Q+H+
Sbjct: 121 LVKDGKFGAYMQVHI 135

Hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr). Could be a defense mechanism against a harmful effect of D-tyrosine.

Bos taurus (taxid: 9913)

EC: 3

EC: .

EC: 1

EC: .

EC: -

EC: .

EC: -

>sp|Q54EY1|DTD_DICDI D-tyrosyl-tRNA(Tyr) deacylase OS=Dictyostelium discoideum GN=dtd PE=3 SV=1

 Score = 98.2 bits (243), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 50/124 (40%), Positives = 72/124 (58%), Gaps = 23/124 (18%)

Query: 37  MRAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDADADYVMQK------------ 84
           M+A++QRV S+SV VEG ++SEI  GL+ L+G+   DT  DA+Y+ +K            
Sbjct: 1   MKAIIQRVKSSSVTVEGEVISEIKQGLMCLIGIGRDDTKEDAEYITRKILNLRLWKNEDG 60

Query: 85  -----------KYGVLLVSQFTLYGILKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNP 133
                       Y +L VSQFTL+  LKGNK  +H+AM P+ +K FY   ++  +KSY P
Sbjct: 61  TKNWDRSVQQMDYEILFVSQFTLFAQLKGNKQSYHLAMAPELSKQFYLDFLENAKKSYKP 120

Query: 134 DAIK 137
           + IK
Sbjct: 121 EKIK 124

Hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr). Could be a defense mechanism against a harmful effect of D-tyrosine.

Dictyostelium discoideum (taxid: 44689)

EC: 3

EC: .

EC: 1

EC: .

EC: -

EC: .

EC: -

>sp|Q74FT1|DTD_GEOSL D-tyrosyl-tRNA(Tyr) deacylase OS=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) GN=dtd PE=3 SV=1

 Score = 84.0 bits (206), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 51/134 (38%), Positives = 71/134 (52%), Gaps = 23/134 (17%)

Query: 37  MRAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDADADYVMQKKYG--------- 87
           M+AV+QRV+ A VEV+G  V  IG G+LVL+G+ + DT+ DA ++ +K  G         
Sbjct: 1   MKAVIQRVSEARVEVDGSTVGAIGRGILVLLGVEKGDTERDAAWLAEKMAGLRIFEDDAG 60

Query: 88  ------------VLLVSQFTLYG-ILKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNPD 134
                       +L VSQFTL G   KG +P F  A PP + K  YD  VD  R++  P 
Sbjct: 61  KMNLSVREVEGSILAVSQFTLAGNCAKGRRPSFDTAAPPDEGKRLYDRFVDLIRETGIPT 120

Query: 135 AIKG-KCAFQLHLV 147
           A    +   ++HLV
Sbjct: 121 ATGIFQADMKVHLV 134

Hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr). Could be a defense mechanism against a harmful effect of D-tyrosine.

Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) (taxid: 243231)

EC: 3

EC: .

EC: 1

EC: .

EC: -

EC: .

EC: -

>sp|B0TF85|DTD_HELMI D-tyrosyl-tRNA(Tyr) deacylase OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=dtd PE=3 SV=1

 Score = 82.0 bits (201), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 54/134 (40%), Positives = 73/134 (54%), Gaps = 25/134 (18%)

Query: 37  MRAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDADADYVMQK---------KYG 87
           MRA++QRV    V VEG  V  IGPGL+VLVG  + D +ADA YV +K         + G
Sbjct: 1   MRALIQRVLRGRVTVEGSEVGAIGPGLVVLVGAGQGDGEADARYVAEKIAHLRIFEDEQG 60

Query: 88  ------------VLLVSQFTLYG-ILKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNPD 134
                       VL+VSQFTLYG   KG +P F  A PP +A+   +++V + RK +   
Sbjct: 61  KMNRSVSDVGGEVLVVSQFTLYGDCRKGRRPSFTQAAPPDEARRLVEAVVAELRK-FGLT 119

Query: 135 AIKGKCAFQLHLVL 148
              G+  FQ H+V+
Sbjct: 120 VATGQ--FQAHMVV 131

Hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr). Could be a defense mechanism against a harmful effect of D-tyrosine.

Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) (taxid: 498761)

EC: 3

EC: .

EC: 1

EC: .

EC: -

EC: .

EC: -

>sp|Q24UQ3|DTD_DESHY D-tyrosyl-tRNA(Tyr) deacylase OS=Desulfitobacterium hafniense (strain Y51) GN=dtd PE=3 SV=1

 Score = 81.6 bits (200), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 48/114 (42%), Positives = 61/114 (53%), Gaps = 22/114 (19%)

Query: 37  MRAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDADADYVMQKKYG--------- 87
           MR+VVQRV  ASV VEG +V  IG GLLVL G+   DT+AD ++++ K  G         
Sbjct: 1   MRSVVQRVTQASVTVEGEVVGRIGAGLLVLFGVGRGDTEADLNWMVDKIAGLRLFEDGEG 60

Query: 88  ------------VLLVSQFTLYG-ILKGNKPDFHVAMPPQKAKPFYDSLVDKFR 128
                       +L+VSQFTLYG   KG +P F  A PP+ A   +   V K R
Sbjct: 61  KMNRSVQDVGGEILMVSQFTLYGDCRKGKRPSFATAAPPETAGELFQQAVAKMR 114

Hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr). Could be a defense mechanism against a harmful effect of D-tyrosine.

Desulfitobacterium hafniense (strain Y51) (taxid: 138119)

EC: 3

EC: .

EC: 1

EC: .

EC: -

EC: .

EC: -

>sp|B8FQT8|DTD_DESHD D-tyrosyl-tRNA(Tyr) deacylase OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=dtd PE=3 SV=1

 Score = 81.6 bits (200), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 48/114 (42%), Positives = 61/114 (53%), Gaps = 22/114 (19%)

Query: 37  MRAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDADADYVMQKKYG--------- 87
           MR+VVQRV  ASV VEG +V  IG GLLVL G+   DT+AD ++++ K  G         
Sbjct: 1   MRSVVQRVTQASVTVEGEVVGRIGAGLLVLFGVGRGDTEADLNWMVDKIAGLRLFEDGEG 60

Query: 88  ------------VLLVSQFTLYG-ILKGNKPDFHVAMPPQKAKPFYDSLVDKFR 128
                       +L+VSQFTLYG   KG +P F  A PP+ A   +   V K R
Sbjct: 61  KMNRSVQDVGGEILMVSQFTLYGDCRKGKRPSFATAAPPETAGELFQQAVAKMR 114

Hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr). Could be a defense mechanism against a harmful effect of D-tyrosine.

Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) (taxid: 272564)

EC: 3

EC: .

EC: 1

EC: .

EC: -

EC: .

EC: -

>sp|Q1DDE5|DTD_MYXXD D-tyrosyl-tRNA(Tyr) deacylase OS=Myxococcus xanthus (strain DK 1622) GN=dtd PE=3 SV=1

 Score = 80.9 bits (198), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 49/115 (42%), Positives = 66/115 (57%), Gaps = 22/115 (19%)

Query: 37  MRAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDADADYVMQK------------ 84
           MRAVVQRV  ASV VEG+ VS+IGPGLLVL+G+ + DT+AD  ++++K            
Sbjct: 1   MRAVVQRVLEASVTVEGQRVSDIGPGLLVLLGVGKGDTEADVAWMVEKLATLRIFEDAAG 60

Query: 85  ---------KYGVLLVSQFTLYG-ILKGNKPDFHVAMPPQKAKPFYDSLVDKFRK 129
                       +++VSQFTLYG   KG +P F  AM P  AK  Y+   +  R+
Sbjct: 61  KMNLSLEETSRQLIVVSQFTLYGDARKGRRPSFIDAMEPVSAKALYERTCELLRQ 115

Hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr). Could be a defense mechanism against a harmful effect of D-tyrosine.

Myxococcus xanthus (strain DK 1622) (taxid: 246197)

EC: 3

EC: .

EC: 1

EC: .

EC: -

EC: .

EC: -

>sp|C5CGW6|DTD_KOSOT D-tyrosyl-tRNA(Tyr) deacylase OS=Kosmotoga olearia (strain TBF 19.5.1) GN=dtd PE=3 SV=1

 Score = 80.5 bits (197), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 50/134 (37%), Positives = 75/134 (55%), Gaps = 26/134 (19%)

Query: 37  MRAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDADADYVMQK------------ 84
           MRAVVQRV+ A V+V+G++V +I  GL+VL+G+ + DT+ D D++++K            
Sbjct: 1   MRAVVQRVSEAEVKVDGKIVGKISDGLMVLLGVQKDDTEKDLDWMLEKILNLRIFEDETG 60

Query: 85  --------KYG-VLLVSQFTLYG-ILKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNPD 134
                   K G ++LVSQFTL G   KG +P F  A PP KAK  +D  V K  +  + +
Sbjct: 61  KMNLSLLEKGGQLMLVSQFTLLGDARKGRRPSFTEAAPPDKAKEIFDRFVKKASERVHVE 120

Query: 135 AIKGKCAFQLHLVL 148
                  FQ H+++
Sbjct: 121 T----GVFQAHMLV 130

Hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr). Could be a defense mechanism against a harmful effect of D-tyrosine.

Kosmotoga olearia (strain TBF 19.5.1) (taxid: 521045)

EC: 3

EC: .

EC: 1

EC: .

EC: -

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	183
255563036	196	D-tyrosyl-tRNA(Tyr) deacylase, putative	0.721	0.673	0.622	4e-45
224116382	201	predicted protein [Populus trichocarpa]	0.721	0.656	0.618	4e-45
225443539	182	PREDICTED: D-tyrosyl-tRNA(Tyr) deacylase	0.661	0.664	0.630	6e-45
297740459	162	unnamed protein product [Vitis vinifera]	0.551	0.623	0.717	3e-42
2832652	190	putative protein [Arabidopsis thaliana]	0.655	0.631	0.571	3e-41
297800210	153	D-Tyr-tRNA deacylase family protein [Ara	0.551	0.660	0.653	2e-39
22328775	153	D-tyrosyl-tRNA(Tyr)deacylase [Arabidopsi	0.551	0.660	0.653	5e-39
449462107	152	PREDICTED: D-tyrosyl-tRNA(Tyr) deacylase	0.551	0.664	0.677	1e-38
115435596	177	Os01g0242500 [Oryza sativa Japonica Grou	0.551	0.570	0.685	1e-38
357129263	177	PREDICTED: D-tyrosyl-tRNA(Tyr) deacylase	0.551	0.570	0.669	2e-37

>gi|255563036|ref|XP_002522522.1| D-tyrosyl-tRNA(Tyr) deacylase, putative [Ricinus communis] gi|223538213|gb|EEF39822.1| D-tyrosyl-tRNA(Tyr) deacylase, putative [Ricinus communis]

 Score =  186 bits (472), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 99/159 (62%), Positives = 110/159 (69%), Gaps = 27/159 (16%)

Query: 2   YAISWLPSFPINLARSRSRKLNKTQLHNRKRQINAMRAVVQRVASASVEVEGRLVSEIGP 61
           Y IS L S    L   R+     T+    K QI AMRAVVQRV+SASVEV+G  VSEIGP
Sbjct: 4   YCISTLSS----LTTLRNINTRPTRATTSKLQIRAMRAVVQRVSSASVEVDGNTVSEIGP 59

Query: 62  GLLVLVGLHEFDTDADADY-----------------------VMQKKYGVLLVSQFTLYG 98
           GL+VLVGLHE DTD+DADY                       VMQ+ YGVLLVSQFTLYG
Sbjct: 60  GLVVLVGLHESDTDSDADYICRKVLNMRLFPNETTGRAWDQNVMQRNYGVLLVSQFTLYG 119

Query: 99  ILKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNPDAIK 137
           I+KGNKPDFHVAMPPQKAKPFYDS+V++FRKSY PDAIK
Sbjct: 120 IMKGNKPDFHVAMPPQKAKPFYDSVVEQFRKSYTPDAIK 158

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224116382|ref|XP_002331968.1| predicted protein [Populus trichocarpa] gi|222874745|gb|EEF11876.1| predicted protein [Populus trichocarpa]

 Score =  186 bits (471), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 99/160 (61%), Positives = 114/160 (71%), Gaps = 28/160 (17%)

Query: 2   YAISWLPSFPINLARSRSRKLNKTQLHNRKR-QINAMRAVVQRVASASVEVEGRLVSEIG 60
           +++S LPSF    A+S  +   K+   + K  QI AMRAVVQRV SASVEV+G +VSEIG
Sbjct: 6   HSLSTLPSF----AKSADKTAKKSTFASCKTLQIRAMRAVVQRVTSASVEVDGHMVSEIG 61

Query: 61  PGLLVLVGLHEFDTDADADY-----------------------VMQKKYGVLLVSQFTLY 97
           PGLLVLVGLHE DTD++ADY                       VMQ+ Y VLLVSQFTLY
Sbjct: 62  PGLLVLVGLHESDTDSNADYICRKVLNMRLFTNESTGRGWDQNVMQRNYEVLLVSQFTLY 121

Query: 98  GILKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNPDAIK 137
           G+LKGNKPDFHVAMPPQKAKPFY+SLVDKFRK+Y PDAIK
Sbjct: 122 GVLKGNKPDFHVAMPPQKAKPFYESLVDKFRKAYRPDAIK 161

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225443539|ref|XP_002277179.1| PREDICTED: D-tyrosyl-tRNA(Tyr) deacylase-like [Vitis vinifera]

 Score =  185 bits (470), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 94/149 (63%), Positives = 110/149 (73%), Gaps = 28/149 (18%)

Query: 12  INLARSRSRKLNKTQLHNRKRQINAMRAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHE 71
            ++ R++ R +++     R+ Q+ AMRA+VQRV+SASVEVEGR+VSEIGPGLLVLVG+HE
Sbjct: 10  CSIIRTKHRSVSR-----RRAQVRAMRAIVQRVSSASVEVEGRIVSEIGPGLLVLVGVHE 64

Query: 72  FDTDADADY-----------------------VMQKKYGVLLVSQFTLYGILKGNKPDFH 108
            DTD+DADY                       V+QK YGVLLVSQFTLYGILKGNKPDFH
Sbjct: 65  SDTDSDADYICRKVLNMRLFPNETTGRAWDQSVVQKNYGVLLVSQFTLYGILKGNKPDFH 124

Query: 109 VAMPPQKAKPFYDSLVDKFRKSYNPDAIK 137
           VAMPPQKAKPFY S VD+FR SYNPDAIK
Sbjct: 125 VAMPPQKAKPFYASFVDRFRTSYNPDAIK 153

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297740459|emb|CBI30641.3| unnamed protein product [Vitis vinifera]

 Score =  176 bits (447), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 89/124 (71%), Positives = 96/124 (77%), Gaps = 23/124 (18%)

Query: 37  MRAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDADADY---------------- 80
           MRA+VQRV+SASVEVEGR+VSEIGPGLLVLVG+HE DTD+DADY                
Sbjct: 1   MRAIVQRVSSASVEVEGRIVSEIGPGLLVLVGVHESDTDSDADYICRKVLNMRLFPNETT 60

Query: 81  -------VMQKKYGVLLVSQFTLYGILKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNP 133
                  V+QK YGVLLVSQFTLYGILKGNKPDFHVAMPPQKAKPFY S VD+FR SYNP
Sbjct: 61  GRAWDQSVVQKNYGVLLVSQFTLYGILKGNKPDFHVAMPPQKAKPFYASFVDRFRTSYNP 120

Query: 134 DAIK 137
           DAIK
Sbjct: 121 DAIK 124

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|2832652|emb|CAA16727.1| putative protein [Arabidopsis thaliana] gi|7268640|emb|CAB78849.1| putative protein [Arabidopsis thaliana]

 Score =  173 bits (439), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 88/154 (57%), Positives = 105/154 (68%), Gaps = 34/154 (22%)

Query: 18  RSRKLNKTQLHNRKRQINAMRAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDAD 77
           R+ +    +LH R  QI AMRAV+QRV+S+SV V+GR+VSEIGPGLLVL+G+HE DT++D
Sbjct: 25  RNLRHQSQRLHRRNCQIRAMRAVIQRVSSSSVTVDGRIVSEIGPGLLVLIGIHESDTESD 84

Query: 78  ADY----------------------------------VMQKKYGVLLVSQFTLYGILKGN 103
           ADY                                  VMQ+ YGVLLVSQFTLYG LKGN
Sbjct: 85  ADYILQILKLKHVYRCRKVLNMRLFSNETTGKGWDQNVMQRNYGVLLVSQFTLYGFLKGN 144

Query: 104 KPDFHVAMPPQKAKPFYDSLVDKFRKSYNPDAIK 137
           KPDFHVAMPP KAKPFY SLV+KF+K+YNPDA+K
Sbjct: 145 KPDFHVAMPPDKAKPFYASLVEKFQKAYNPDAVK 178

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297800210|ref|XP_002867989.1| D-Tyr-tRNA deacylase family protein [Arabidopsis lyrata subsp. lyrata] gi|297313825|gb|EFH44248.1| D-Tyr-tRNA deacylase family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  167 bits (423), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 81/124 (65%), Positives = 95/124 (76%), Gaps = 23/124 (18%)

Query: 37  MRAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDADADY---------------- 80
           MRAV+QRV+S+SV V+GR+VSEIGPGLLVL+G+HE DTD+DADY                
Sbjct: 1   MRAVIQRVSSSSVTVDGRIVSEIGPGLLVLIGIHESDTDSDADYICRKVLNMRLFSNETT 60

Query: 81  -------VMQKKYGVLLVSQFTLYGILKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNP 133
                  VMQ+ YG+LLVSQFTLYG LKGNKPDFHVAMPP KAKPFY SLV+KF+K+YNP
Sbjct: 61  GKGWDQNVMQRNYGILLVSQFTLYGFLKGNKPDFHVAMPPDKAKPFYASLVEKFQKAYNP 120

Query: 134 DAIK 137
           DA+K
Sbjct: 121 DAVK 124

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|22328775|ref|NP_193582.2| D-tyrosyl-tRNA(Tyr)deacylase [Arabidopsis thaliana] gi|17473902|gb|AAL38369.1| RNA helicase - like protein [Arabidopsis thaliana] gi|24899807|gb|AAN65118.1| RNA helicase - like protein [Arabidopsis thaliana] gi|332658649|gb|AEE84049.1| D-tyrosyl-tRNA(Tyr)deacylase [Arabidopsis thaliana]

 Score =  166 bits (419), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 81/124 (65%), Positives = 95/124 (76%), Gaps = 23/124 (18%)

Query: 37  MRAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDADADY---------------- 80
           MRAV+QRV+S+SV V+GR+VSEIGPGLLVL+G+HE DT++DADY                
Sbjct: 1   MRAVIQRVSSSSVTVDGRIVSEIGPGLLVLIGIHESDTESDADYICRKVLNMRLFSNETT 60

Query: 81  -------VMQKKYGVLLVSQFTLYGILKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNP 133
                  VMQ+ YGVLLVSQFTLYG LKGNKPDFHVAMPP KAKPFY SLV+KF+K+YNP
Sbjct: 61  GKGWDQNVMQRNYGVLLVSQFTLYGFLKGNKPDFHVAMPPDKAKPFYASLVEKFQKAYNP 120

Query: 134 DAIK 137
           DA+K
Sbjct: 121 DAVK 124

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449462107|ref|XP_004148783.1| PREDICTED: D-tyrosyl-tRNA(Tyr) deacylase-like [Cucumis sativus] gi|449515629|ref|XP_004164851.1| PREDICTED: D-tyrosyl-tRNA(Tyr) deacylase-like [Cucumis sativus]

 Score =  164 bits (416), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 84/124 (67%), Positives = 94/124 (75%), Gaps = 23/124 (18%)

Query: 37  MRAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDADADY---------------- 80
           MRAVVQRVASASV+V+GR VSEIGPGLLVLVGLH+ D+D DA+Y                
Sbjct: 1   MRAVVQRVASASVQVDGRTVSEIGPGLLVLVGLHDSDSDTDAEYICRKVLNMRLFPNEST 60

Query: 81  -------VMQKKYGVLLVSQFTLYGILKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNP 133
                  VMQK Y VLLVSQFTLYG+LKGNKPDFHVAMPPQ+AKPFY S+V++F KSYNP
Sbjct: 61  GKAWDLNVMQKNYEVLLVSQFTLYGMLKGNKPDFHVAMPPQRAKPFYASVVERFGKSYNP 120

Query: 134 DAIK 137
           DAIK
Sbjct: 121 DAIK 124

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|115435596|ref|NP_001042556.1| Os01g0242500 [Oryza sativa Japonica Group] gi|56784580|dbj|BAD81627.1| putative histidyl-tRNA synthetase 2 [Oryza sativa Japonica Group] gi|113532087|dbj|BAF04470.1| Os01g0242500 [Oryza sativa Japonica Group] gi|125525130|gb|EAY73244.1| hypothetical protein OsI_01121 [Oryza sativa Indica Group] gi|125569699|gb|EAZ11214.1| hypothetical protein OsJ_01069 [Oryza sativa Japonica Group] gi|215707135|dbj|BAG93595.1| unnamed protein product [Oryza sativa Japonica Group]

 Score =  164 bits (415), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 85/124 (68%), Positives = 94/124 (75%), Gaps = 23/124 (18%)

Query: 37  MRAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDADADY---------------- 80
           MRAVVQRV SASVEVEGR+VS IGPGLLVLVG+HE DTDADADY                
Sbjct: 1   MRAVVQRVLSASVEVEGRVVSAIGPGLLVLVGVHEADTDADADYICRKVLNMRLFPNEKT 60

Query: 81  -------VMQKKYGVLLVSQFTLYGILKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNP 133
                  V+Q+K+ VLLVSQFTLYGILKGNKPDFHVAMPP KAKPFY SLV+KF+KSY+ 
Sbjct: 61  EKAWDQSVLQRKFEVLLVSQFTLYGILKGNKPDFHVAMPPAKAKPFYASLVEKFQKSYSA 120

Query: 134 DAIK 137
           DA+K
Sbjct: 121 DAVK 124

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357129263|ref|XP_003566284.1| PREDICTED: D-tyrosyl-tRNA(Tyr) deacylase-like [Brachypodium distachyon]

 Score =  160 bits (406), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 83/124 (66%), Positives = 91/124 (73%), Gaps = 23/124 (18%)

Query: 37  MRAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDADADY---------------- 80
           MRAVVQRV SASVEVEGR+VS IGPGLLVLVG+HE DTD+DADY                
Sbjct: 1   MRAVVQRVLSASVEVEGRVVSAIGPGLLVLVGVHEADTDSDADYICRKVLNMRLFPNEKT 60

Query: 81  -------VMQKKYGVLLVSQFTLYGILKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNP 133
                  VMQ+ + VLLVSQFTLYGILKGNKPDFHVAMPP KAKPFY SLV+KF+KSY  
Sbjct: 61  GKAWDQSVMQRNFEVLLVSQFTLYGILKGNKPDFHVAMPPAKAKPFYTSLVEKFQKSYTN 120

Query: 134 DAIK 137
           D +K
Sbjct: 121 DTVK 124

Source: Brachypodium distachyon

Species: Brachypodium distachyon

Genus: Brachypodium

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	183
TAIR|locus:2124519	153	AT4G18460 [Arabidopsis thalian	0.311	0.372	0.842	7.8e-23
UNIPROTKB|F1SBH1	209	DTD1 "D-tyrosyl-tRNA(Tyr) deac	0.377	0.330	0.541	7.3e-20
ZFIN|ZDB-GENE-040801-175	207	hars2 "histidyl-tRNA synthetas	0.382	0.338	0.436	3.9e-19
WB|WBGene00004151	150	pqn-68 [Caenorhabditis elegans	0.333	0.406	0.532	1.4e-17
DICTYBASE|DDB_G0291273	151	dtd "D-tyrosyl-tRNA(Tyr) deacy	0.311	0.377	0.491	2.3e-17
FB|FBgn0037898	158	CG18643 [Drosophila melanogast	0.322	0.373	0.467	5.2e-16
MGI|MGI:1913294	209	Dtd1 "D-tyrosyl-tRNA deacylase	0.442	0.387	0.459	2.6e-15
UNIPROTKB|Q8TEA8	209	DTD1 "D-tyrosyl-tRNA(Tyr) deac	0.442	0.387	0.448	4.2e-15
UNIPROTKB|J9P7T2	314	DTD1 "D-tyrosyl-tRNA(Tyr) deac	0.442	0.257	0.448	5.3e-15
UNIPROTKB|E1BRV8	207	DTD1 "D-tyrosyl-tRNA(Tyr) deac	0.442	0.391	0.448	8.8e-15

TAIR|locus:2124519 AT4G18460 [Arabidopsis thaliana (taxid:3702)]

 Score = 264 (98.0 bits), Expect = 7.8e-23, P = 7.8e-23
 Identities = 48/57 (84%), Positives = 53/57 (92%)

Query:    81 VMQKKYGVLLVSQFTLYGILKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNPDAIK 137
             VMQ+ YGVLLVSQFTLYG LKGNKPDFHVAMPP KAKPFY SLV+KF+K+YNPDA+K
Sbjct:    68 VMQRNYGVLLVSQFTLYGFLKGNKPDFHVAMPPDKAKPFYASLVEKFQKAYNPDAVK 124

GO:0005737 "cytoplasm" evidence=ISM;IEA;ISS

GO:0016788 "hydrolase activity, acting on ester bonds" evidence=IEA;ISS

GO:0019478 "D-amino acid catabolic process" evidence=IEA;ISS

UNIPROTKB|F1SBH1 DTD1 "D-tyrosyl-tRNA(Tyr) deacylase" [Sus scrofa (taxid:9823)]

 Score = 192 (72.6 bits), Expect = 7.3e-20, Sum P(2) = 7.3e-20
 Identities = 39/72 (54%), Positives = 53/72 (73%)

Query:    78 ADYVMQKKYGVLLVSQFTLYGILKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNPDAIK 137
             A  VM K+Y VL VSQFTL  +LKGNKPDFH+AMP ++A+ FY+S +++ RK+Y P+ IK
Sbjct:    64 AKSVMDKQYEVLCVSQFTLQCVLKGNKPDFHLAMPSEQAEGFYNSFLEQLRKAYRPELIK 123

Query:   138 -GKCA--FQLHL 146
              GK     Q+H+
Sbjct:   124 DGKFGAYMQVHI 135

GO:0005737 "cytoplasm" evidence=IEA

GO:0005730 "nucleolus" evidence=IEA

GO:0019478 "D-amino acid catabolic process" evidence=IEA

GO:0016788 "hydrolase activity, acting on ester bonds" evidence=IEA

ZFIN|ZDB-GENE-040801-175 hars2 "histidyl-tRNA synthetase 2, mitochondrial (putative)" [Danio rerio (taxid:7955)]

 Score = 170 (64.9 bits), Expect = 3.9e-19, Sum P(2) = 3.9e-19
 Identities = 31/71 (43%), Positives = 53/71 (74%)

Query:    81 VMQKKYGVLLVSQFTLYGILKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNPDAIK-GK 139
             VM  +  VL VSQFTL  +LKGNKPD+H AMP + A+PFY++++++ R++Y P+ IK G+
Sbjct:    67 VMDGELEVLCVSQFTLQCLLKGNKPDYHAAMPAELAQPFYNNMLEQLRETYKPELIKDGQ 126

Query:   140 CAFQLHLVLRS 150
                ++ +++++
Sbjct:   127 FGAKMQVLIQN 137

GO:0016788 "hydrolase activity, acting on ester bonds" evidence=IEA

GO:0019478 "D-amino acid catabolic process" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0004812 "aminoacyl-tRNA ligase activity" evidence=IEA

GO:0016787 "hydrolase activity" evidence=IEA

WB|WBGene00004151 pqn-68 [Caenorhabditis elegans (taxid:6239)]

 Score = 149 (57.5 bits), Expect = 1.4e-17, Sum P(2) = 1.4e-17
 Identities = 33/62 (53%), Positives = 39/62 (62%)

Query:    81 VMQKKYGVLLVSQFTLYGILKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNPDAIK-GK 139
             VM     VL VSQFTLYG  KGNK DFH AM P +A  FY S ++  +K+Y  D I+ GK
Sbjct:    67 VMDLDLEVLSVSQFTLYGQFKGNKLDFHTAMAPTEASKFYASFLEAMKKAYKADKIQDGK 126

Query:   140 CA 141
              A
Sbjct:   127 FA 128

GO:0005737 "cytoplasm" evidence=IEA

GO:0016788 "hydrolase activity, acting on ester bonds" evidence=IEA

GO:0019478 "D-amino acid catabolic process" evidence=IEA

DICTYBASE|DDB_G0291273 dtd "D-tyrosyl-tRNA(Tyr) deacylase" [Dictyostelium discoideum (taxid:44689)]

 Score = 149 (57.5 bits), Expect = 2.3e-17, Sum P(2) = 2.3e-17
 Identities = 28/57 (49%), Positives = 38/57 (66%)

Query:    81 VMQKKYGVLLVSQFTLYGILKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNPDAIK 137
             V Q  Y +L VSQFTL+  LKGNK  +H+AM P+ +K FY   ++  +KSY P+ IK
Sbjct:    68 VQQMDYEILFVSQFTLFAQLKGNKQSYHLAMAPELSKQFYLDFLENAKKSYKPEKIK 124

GO:0019478 "D-amino acid catabolic process" evidence=IEA;ISS

GO:0016788 "hydrolase activity, acting on ester bonds" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA;ISS

GO:0051500 "D-tyrosyl-tRNA(Tyr) deacylase activity" evidence=ISS

GO:0016787 "hydrolase activity" evidence=IEA

FB|FBgn0037898 CG18643 [Drosophila melanogaster (taxid:7227)]

 Score = 128 (50.1 bits), Expect = 5.2e-16, Sum P(2) = 5.2e-16
 Identities = 29/62 (46%), Positives = 40/62 (64%)

Query:    88 VLLVSQFTLYGILKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNPDAIK-GKCA--FQL 144
             +L VSQFTLY  LKGNKPDF  AM  ++A+  Y+  +D+  +SY+   IK GK     Q+
Sbjct:    73 LLCVSQFTLYHRLKGNKPDFLAAMKGEEAQELYNQFLDRLGQSYDSTKIKDGKFGAYMQV 132

Query:   145 HL 146
             H+
Sbjct:   133 HI 134

GO:0016788 "hydrolase activity, acting on ester bonds" evidence=IEA

GO:0019478 "D-amino acid catabolic process" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

MGI|MGI:1913294 Dtd1 "D-tyrosyl-tRNA deacylase 1" [Mus musculus (taxid:10090)]

 Score = 193 (73.0 bits), Expect = 2.6e-15, P = 2.6e-15
 Identities = 40/87 (45%), Positives = 60/87 (68%)

Query:    66 LVGLHEFDTDADADY---VMQKKYGVLLVSQFTLYGILKGNKPDFHVAMPPQKAKPFYDS 122
             ++ L  F+ ++   +   VM K+Y VL VSQFTL  +LKGNKPDFH+AMP ++A+ FY+S
Sbjct:    49 ILNLRVFEDESGKHWSKSVMDKEYEVLCVSQFTLQCVLKGNKPDFHLAMPTEQAESFYNS 108

Query:   123 LVDKFRKSYNPDAIK-GKCA--FQLHL 146
              +++ RKSY P+ I+ GK     Q+H+
Sbjct:   109 FLEQLRKSYRPELIRDGKFGAYMQVHI 135

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0016787 "hydrolase activity" evidence=IEA

GO:0016788 "hydrolase activity, acting on ester bonds" evidence=IEA

GO:0019478 "D-amino acid catabolic process" evidence=IEA

UNIPROTKB|Q8TEA8 DTD1 "D-tyrosyl-tRNA(Tyr) deacylase 1" [Homo sapiens (taxid:9606)]

 Score = 191 (72.3 bits), Expect = 4.2e-15, P = 4.2e-15
 Identities = 39/87 (44%), Positives = 60/87 (68%)

Query:    66 LVGLHEFDTDADADY---VMQKKYGVLLVSQFTLYGILKGNKPDFHVAMPPQKAKPFYDS 122
             ++ L  F+ ++   +   VM K+Y +L VSQFTL  +LKGNKPDFH+AMP ++A+ FY+S
Sbjct:    49 ILNLRVFEDESGKHWSKSVMDKQYEILCVSQFTLQCVLKGNKPDFHLAMPTEQAEGFYNS 108

Query:   123 LVDKFRKSYNPDAIK-GKCA--FQLHL 146
              +++ RK+Y P+ IK GK     Q+H+
Sbjct:   109 FLEQLRKTYRPELIKDGKFGAYMQVHI 135

GO:0016788 "hydrolase activity, acting on ester bonds" evidence=IEA

GO:0019478 "D-amino acid catabolic process" evidence=IEA

GO:0005730 "nucleolus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

UNIPROTKB|J9P7T2 DTD1 "D-tyrosyl-tRNA(Tyr) deacylase" [Canis lupus familiaris (taxid:9615)]

 Score = 192 (72.6 bits), Expect = 5.3e-15, P = 5.3e-15
 Identities = 39/87 (44%), Positives = 60/87 (68%)

Query:    66 LVGLHEFDTDADADY---VMQKKYGVLLVSQFTLYGILKGNKPDFHVAMPPQKAKPFYDS 122
             ++ L  F+ ++   +   VM K+Y VL +SQFTL  +LKGNKPDFH+AMP ++A+ FY+S
Sbjct:   154 ILNLRVFEDESGKHWSKSVMDKQYEVLCISQFTLQCVLKGNKPDFHLAMPTEQAESFYNS 213

Query:   123 LVDKFRKSYNPDAIK-GKCA--FQLHL 146
              +++ RK+Y P+ IK GK     Q+H+
Sbjct:   214 FLEQLRKTYRPELIKDGKFGTYMQVHI 240

GO:0005737 "cytoplasm" evidence=IEA

GO:0019478 "D-amino acid catabolic process" evidence=IEA

GO:0016788 "hydrolase activity, acting on ester bonds" evidence=IEA

UNIPROTKB|E1BRV8 DTD1 "D-tyrosyl-tRNA(Tyr) deacylase" [Gallus gallus (taxid:9031)]

 Score = 188 (71.2 bits), Expect = 8.8e-15, P = 8.8e-15
 Identities = 39/87 (44%), Positives = 60/87 (68%)

Query:    66 LVGLHEFDTDADADY---VMQKKYGVLLVSQFTLYGILKGNKPDFHVAMPPQKAKPFYDS 122
             ++ L  F+ ++   +   VM K+Y VL VSQFTL  ILKGNKPD+H+AMP ++A+ FY++
Sbjct:    49 ILNLRVFEDESGKHWSKSVMDKQYEVLCVSQFTLQCILKGNKPDYHMAMPTEQAESFYNN 108

Query:   123 LVDKFRKSYNPDAIK-GKCA--FQLHL 146
              +++ RK+Y P+ IK GK     Q+H+
Sbjct:   109 FLEQLRKAYKPELIKDGKFGAYMQVHI 135

GO:0016788 "hydrolase activity, acting on ester bonds" evidence=IEA

GO:0019478 "D-amino acid catabolic process" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005730 "nucleolus" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	estExt_fgenesh4_pg.C_1870028	hypothetical protein; Hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr). Could be a defense mechanism against a harmful effect of D-tyrosine (By similarity) (202 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	eugene3.00140713	hypothetical protein (892 aa)	•						•		0.620
	gw1.I.9324.1	hypothetical protein (716 aa)	•						•		0.609
	gw1.28.724.1	histidine-tRNA ligase (EC-6.1.1.21) (441 aa)	•								0.587
	gw1.XI.1735.1	hypothetical protein (434 aa)	•								0.570
	estExt_fgenesh4_pg.C_LG_III0273	hypothetical protein (738 aa)	•						•		0.562
	estExt_fgenesh4_pg.C_LG_XVI0748	adenylosuccinate synthase (EC-6.3.4.4); Plays an important role in the de novo pathway of purin [...] (491 aa)	•								0.546
	fgenesh4_pg.C_scaffold_9806000002	Predicted protein (303 aa)	•								0.542
	CMS	SubName- Full=Putative chloroplast 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; EC [...] (230 aa)	•			•					0.530
	gw1.II.3029.1	hypothetical protein; Exchanges the guanine residue with 7-aminomethyl-7- deazaguanine in tRNAs [...] (392 aa)	•								0.528
	gw1.I.4241.1	hypothetical protein (326 aa)	•								0.525

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	183
PTZ00120	154	PTZ00120, PTZ00120, D-tyrosyl-tRNA(Tyr) deacylase;	2e-50
cd00563	145	cd00563, Dtyr_deacylase, D-Tyrosyl-tRNAtyr deacyla	4e-42
PRK05273	147	PRK05273, PRK05273, D-tyrosyl-tRNA(Tyr) deacylase;	3e-38
COG1490	145	COG1490, Dtd, D-Tyr-tRNAtyr deacylase [Translation	6e-34
pfam02580	144	pfam02580, Tyr_Deacylase, D-Tyr-tRNA(Tyr) deacylas	2e-32
TIGR00256	145	TIGR00256, TIGR00256, D-tyrosyl-tRNA(Tyr) deacylas	6e-22

>gnl|CDD|185458 PTZ00120, PTZ00120, D-tyrosyl-tRNA(Tyr) deacylase; Provisional

 Score =  159 bits (403), Expect = 2e-50
 Identities = 62/123 (50%), Positives = 76/123 (61%), Gaps = 22/123 (17%)

Query: 37  MRAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDADADY---------------- 80
           MR V+QRV SASV VEG +V  IG GL++LVG+HE DT  DADY                
Sbjct: 1   MRVVIQRVLSASVTVEGEVVGSIGKGLVLLVGIHEEDTWEDADYIIRKCLKLRLWPDEGG 60

Query: 81  ------VMQKKYGVLLVSQFTLYGILKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNPD 134
                 V  K Y VL+VSQFTL+ + KGNKPDFH+AM P+ A P Y+  V+KF+K Y P+
Sbjct: 61  KMWDRSVKDKDYEVLVVSQFTLFNVKKGNKPDFHLAMSPEDALPLYNKFVEKFKKEYAPE 120

Query: 135 AIK 137
            IK
Sbjct: 121 KIK 123

Length = 154

>gnl|CDD|238316 cd00563, Dtyr_deacylase, D-Tyrosyl-tRNAtyr deacylases; a class of tRNA-dependent hydrolases which are capable of hydrolyzing the ester bond of D-Tyrosyl-tRNA reducing the level of cellular D-Tyrosine while recycling the peptidyl-tRNA; found in bacteria and in eukaryotes but not in archea; beta barrel-like fold structure; forms homodimers in which two surface cavities serve as the active site for tRNA binding

 Score =  137 bits (348), Expect = 4e-42
 Identities = 50/117 (42%), Positives = 64/117 (54%), Gaps = 22/117 (18%)

Query: 37  MRAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDADADY---------------- 80
           MRAV+QRV+ ASV V+G +V  IG GLLVLVG+   DT+ DA+Y                
Sbjct: 1   MRAVIQRVSEASVTVDGEVVGAIGQGLLVLVGVTHDDTEEDAEYLARKILNLRIFEDEEG 60

Query: 81  -----VMQKKYGVLLVSQFTLYGIL-KGNKPDFHVAMPPQKAKPFYDSLVDKFRKSY 131
                V      +L+VSQFTLY    KG +P F  A PP KA+P Y+S V+  R+  
Sbjct: 61  KMNLSVKDVNGEILVVSQFTLYADTKKGRRPSFSAAAPPDKAEPLYESFVELLREKG 117

Length = 145

>gnl|CDD|235383 PRK05273, PRK05273, D-tyrosyl-tRNA(Tyr) deacylase; Provisional

 Score =  127 bits (323), Expect = 3e-38
 Identities = 52/119 (43%), Positives = 68/119 (57%), Gaps = 22/119 (18%)

Query: 37  MRAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDADADYVMQK--KY-------- 86
           MRAV+QRV+ ASV V+G +V EIG GLLVLVG+ + DT+ DADY+ +K            
Sbjct: 1   MRAVIQRVSEASVTVDGEVVGEIGKGLLVLVGVEKGDTEEDADYLAEKILNLRIFEDEEG 60

Query: 87  -----------GVLLVSQFTLYG-ILKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNP 133
                       +L+VSQFTLY    KG +P F  A PP++A+P YD  V+  R    P
Sbjct: 61  KMNLSVQDVGGEILVVSQFTLYADTRKGRRPSFSAAAPPEEAEPLYDYFVEALRAQGVP 119

Length = 147

>gnl|CDD|224407 COG1490, Dtd, D-Tyr-tRNAtyr deacylase [Translation, ribosomal structure and biogenesis]

 Score =  116 bits (294), Expect = 6e-34
 Identities = 47/119 (39%), Positives = 64/119 (53%), Gaps = 22/119 (18%)

Query: 37  MRAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDADADYVMQK------------ 84
           M+AV+QRV+SASV V+G +V  IG GLLVLVG+   DT+ DADY+ +K            
Sbjct: 1   MKAVIQRVSSASVSVDGEVVGAIGQGLLVLVGVTHDDTEEDADYLAEKILNLRIFEDEEG 60

Query: 85  ---------KYGVLLVSQFTLYG-ILKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNP 133
                       +L+VSQFTLY    KG +P F  A  P +A+  Y+  V+  R+    
Sbjct: 61  KMNLSVQDVGGEILVVSQFTLYADTKKGRRPSFSKAAKPDQAEELYEYFVELLRELGIK 119

Length = 145

>gnl|CDD|202294 pfam02580, Tyr_Deacylase, D-Tyr-tRNA(Tyr) deacylase

 Score =  113 bits (284), Expect = 2e-32
 Identities = 45/118 (38%), Positives = 60/118 (50%), Gaps = 22/118 (18%)

Query: 38  RAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDADADY----------------- 80
           RAV+QRV  ASV V+G +V  IG GLLVLVG+ + DT+ D  Y                 
Sbjct: 1   RAVLQRVKKASVSVDGEVVGSIGRGLLVLVGVTKDDTEEDLRYLVEKILNLRIFEDEEGK 60

Query: 81  ----VMQKKYGVLLVSQFTLYG-ILKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNP 133
               +      +L+VSQFTLYG   KG +P FH A  P +A+  Y+  V   R++   
Sbjct: 61  MNLSLKDVGGEILIVSQFTLYGDTKKGRRPSFHAAAKPDEAEELYEKFVQLLREAGIK 118

This family comprises of several D-Tyr-tRNA(Tyr) deacylase proteins. Cell growth inhibition by several d-amino acids can be explained by an in vivo production of d-aminoacyl-tRNA molecules. Escherichia coli and yeast cells express an enzyme, d-Tyr-tRNA(Tyr) deacylase, capable of recycling such d-aminoacyl-tRNA molecules into free tRNA and d-amino acid. Accordingly, upon inactivation of the genes of the above deacylases, the toxicity of d-amino acids increases. Orthologues of the deacylase are found in many cells. Length = 144

>gnl|CDD|129358 TIGR00256, TIGR00256, D-tyrosyl-tRNA(Tyr) deacylase

 Score = 86.1 bits (213), Expect = 6e-22
 Identities = 40/115 (34%), Positives = 58/115 (50%), Gaps = 22/115 (19%)

Query: 37  MRAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDADADYVMQKKYG--------- 87
           M A++QRV+ ASV VEG ++ EIG GLLVL+G+ + D +  AD + +K            
Sbjct: 1   MIALIQRVSQASVTVEGEVIGEIGAGLLVLLGVEKDDDEQKADKLAEKVLNYRIFSDSEG 60

Query: 88  ------------VLLVSQFTLYG-ILKGNKPDFHVAMPPQKAKPFYDSLVDKFRK 129
                       +L VSQFTL     KG +P F     P +A+  Y+  V+  R+
Sbjct: 61  KMNLNVQQAGGEILSVSQFTLAADTKKGMRPSFSKGASPDRAEELYEYFVELCRE 115

This homodimeric enzyme appears able to cleave any D-amino acid (and glycine, which does not have distinct D/L forms) from charged tRNA. The name reflects characterization with respect to D-Tyr on tRNA(Tyr) as established in the literature, but substrate specificity seems much broader [Protein synthesis, tRNA aminoacylation]. Length = 145

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	183
TIGR00256	145	D-tyrosyl-tRNA(Tyr) deacylase. This homodimeric en	100.0
COG1490	145	Dtd D-Tyr-tRNAtyr deacylase [Translation, ribosoma	100.0
PRK05273	147	D-tyrosyl-tRNA(Tyr) deacylase; Provisional	100.0
cd00563	145	Dtyr_deacylase D-Tyrosyl-tRNAtyr deacylases; a cla	100.0
PTZ00120	154	D-tyrosyl-tRNA(Tyr) deacylase; Provisional	100.0
PF02580	145	Tyr_Deacylase: D-Tyr-tRNA(Tyr) deacylase; InterPro	100.0
KOG3323	149	consensus D-Tyr-tRNA (Tyr) deacylase [Translation,	100.0

>TIGR00256 D-tyrosyl-tRNA(Tyr) deacylase

Probab=100.00  E-value=3.4e-47  Score=306.33  Aligned_cols=111  Identities=39%  Similarity=0.543  Sum_probs=106.1

Q ss_pred             ceEEEEeeceeEEEECCEEEeeECCeeEEEEecccCCCHHHHHH---------------------HHHcCCceEeecccc
Q 030046           37 MRAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDADADY---------------------VMQKKYGVLLVSQFT   95 (183)
Q Consensus        37 MRaVIQRV~~AsV~Vdgevvg~Ig~GLLvLVGI~k~DTeed~~~---------------------v~Dv~GeILvVSQFT   95 (183)
                      ||+|||||++|+|+|||+++++||+|+|+||||+++||+++++|                     ++|++||||+|||||
T Consensus         1 Mr~viQRV~~AsV~V~~~~v~~I~~GllvlvGi~~~Dt~~~~~~~~~Kil~lRif~de~gk~~~Sv~d~~geiL~VSQFT   80 (145)
T TIGR00256         1 MIALIQRVSQASVTVEGEVIGEIGAGLLVLLGVEKDDDEQKADKLAEKVLNYRIFSDSEGKMNLNVQQAGGEILSVSQFT   80 (145)
T ss_pred             CEEEEEEeCeEEEEECCEEEEEECCcEEEEEEecCCCCHHHHHHHHHHHhheEeccCCCCCccCCHHHCCCCEEEEECCc
Confidence            99999999999999999999999999999999999999999999                     678999999999999


Q ss_pred             ccccC-cCCCCCCCCCCCCCchHHHHHHHHHHHHhhCCCCceecccc---eeEEEEec
Q 030046           96 LYGIL-KGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNPDAIKGKCA---FQLHLVLR  149 (183)
Q Consensus        96 L~ad~-KGnRPsF~~Aa~Pe~A~~LYe~Fve~lr~~~~~~~Vk~G~F---mqv~lv~~  149 (183)
                      ||||+ ||||||||.||+||.|++||++|+++|++.+  .+|++|+|   |+++++|+
T Consensus        81 L~a~~~KG~rPsF~~a~~~~~A~~ly~~fv~~l~~~~--~~V~~G~FGa~M~V~l~Nd  136 (145)
T TIGR00256        81 LAADTKKGMRPSFSKGASPDRAEELYEYFVELCREKG--MKVQTGRFAADMQVSLTND  136 (145)
T ss_pred             ccccCCCCCCCCccccCCHHHHHHHHHHHHHHHHhcC--CCceECccCCCcEEEEEEC
Confidence            99995 9999999999999999999999999999764  58999998   88888886

This homodimeric enzyme appears able to cleave any D-amino acid (and glycine, which does not have distinct D/L forms) from charged tRNA. The name reflects characterization with respect to D-Tyr on tRNA(Tyr) as established in the literature, but substrate specificity seems much broader.

>COG1490 Dtd D-Tyr-tRNAtyr deacylase [Translation, ribosomal structure and biogenesis]

Probab=100.00  E-value=2.7e-47  Score=306.48  Aligned_cols=112  Identities=45%  Similarity=0.647  Sum_probs=107.0

Q ss_pred             ceEEEEeeceeEEEECCEEEeeECCeeEEEEecccCCCHHHHHH---------------------HHHcCCceEeecccc
Q 030046           37 MRAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDADADY---------------------VMQKKYGVLLVSQFT   95 (183)
Q Consensus        37 MRaVIQRV~~AsV~Vdgevvg~Ig~GLLvLVGI~k~DTeed~~~---------------------v~Dv~GeILvVSQFT   95 (183)
                      ||+|||||++|+|+|||+++|+|++|||+||||+++||+++++|                     ++|++|+||+|||||
T Consensus         1 MkaviQRV~~AsV~Vdgeivg~I~~GllvLvGV~~~Dt~~~a~~l~~Ki~~lRiF~D~~gKmN~sv~di~G~iL~VSQFT   80 (145)
T COG1490           1 MKAVIQRVSSASVSVDGEVVGAIGQGLLVLVGVTHDDTEEDADYLAEKILNLRIFEDEEGKMNLSVQDVGGEILVVSQFT   80 (145)
T ss_pred             CeeeeeeeeeeEEEECCEEeeecCCcEEEEEeecCCCCHHHHHHHHHHHhceEeecCcccccccCHHHcCCcEEEEEEEE
Confidence            99999999999999999999999999999999999999999999                     688999999999999


Q ss_pred             cccc-CcCCCCCCCCCCCCCchHHHHHHHHHHHHhhCCCCceecccc---eeEEEEecc
Q 030046           96 LYGI-LKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNPDAIKGKCA---FQLHLVLRS  150 (183)
Q Consensus        96 L~ad-~KGnRPsF~~Aa~Pe~A~~LYe~Fve~lr~~~~~~~Vk~G~F---mqv~lv~~~  150 (183)
                      |||| .|||||||+.||+|+.|++||++|++.|++.+  .+|++|+|   |||+|+|+-
T Consensus        81 L~adt~kG~RPsFs~aa~p~~A~~lYe~f~~~lr~~~--~~V~tG~FgA~M~V~LvNdG  137 (145)
T COG1490          81 LYADTKKGRRPSFSKAAKPDQAEELYEYFVELLRELG--IKVETGRFGADMQVSLVNDG  137 (145)
T ss_pred             EeecccCCCCCCccccCChHHHHHHHHHHHHHHHhcC--CcceeeeeeceeEEEEecCC
Confidence            9999 59999999999999999999999999999875  57999998   999999873

>PRK05273 D-tyrosyl-tRNA(Tyr) deacylase; Provisional

Probab=100.00  E-value=6e-47  Score=305.55  Aligned_cols=112  Identities=48%  Similarity=0.734  Sum_probs=106.5

Q ss_pred             ceEEEEeeceeEEEECCEEEeeECCeeEEEEecccCCCHHHHHH---------------------HHHcCCceEeecccc
Q 030046           37 MRAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDADADY---------------------VMQKKYGVLLVSQFT   95 (183)
Q Consensus        37 MRaVIQRV~~AsV~Vdgevvg~Ig~GLLvLVGI~k~DTeed~~~---------------------v~Dv~GeILvVSQFT   95 (183)
                      ||+|||||++|||+|||+++++||+|+|+||||+++||+++++|                     ++|++||||+|||||
T Consensus         1 Mr~viQRV~~AsV~Vd~~~v~~Ig~GllvlvGi~~~Dt~~~~~~~~~Kil~lRif~d~~gk~~~Sv~d~~geiL~VsQFT   80 (147)
T PRK05273          1 MRAVIQRVSEASVTVDGEVVGEIGKGLLVLVGVEKGDTEEDADYLAEKILNLRIFEDEEGKMNLSVQDVGGEILVVSQFT   80 (147)
T ss_pred             CEEEEEEeceEEEEECCEEEEEECCceEEEEEEcCCCCHHHHHHHHHHHhheEcccCCCCCcccCHHHCCCCEEEEEccc
Confidence            99999999999999999999999999999999999999999999                     678999999999999


Q ss_pred             ccccC-cCCCCCCCCCCCCCchHHHHHHHHHHHHhhCCCCceecccc---eeEEEEecc
Q 030046           96 LYGIL-KGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNPDAIKGKCA---FQLHLVLRS  150 (183)
Q Consensus        96 L~ad~-KGnRPsF~~Aa~Pe~A~~LYe~Fve~lr~~~~~~~Vk~G~F---mqv~lv~~~  150 (183)
                      |||++ ||||||||.||+||.|++||++|+++|++.+  .+|++|+|   |+++++|+=
T Consensus        81 L~a~~~KG~rP~F~~a~~~~~A~~ly~~f~~~l~~~~--~~V~~G~FGa~M~V~l~NDG  137 (147)
T PRK05273         81 LYADTRKGRRPSFSAAAPPEEAEPLYDYFVEALRAQG--VPVETGRFGADMQVSLVNDG  137 (147)
T ss_pred             ccccCCCCCCCCccccCCHHHHHHHHHHHHHHHHHcC--CceeecccCCCcEEEEEECC
Confidence            99995 9999999999999999999999999999886  47999998   888888863

>cd00563 Dtyr_deacylase D-Tyrosyl-tRNAtyr deacylases; a class of tRNA-dependent hydrolases which are capable of hydrolyzing the ester bond of D-Tyrosyl-tRNA reducing the level of cellular D-Tyrosine while recycling the peptidyl-tRNA; found in bacteria and in eukaryotes but not in archea; beta barrel-like fold structure; forms homodimers in which two surface cavities serve as the active site for tRNA binding

Probab=100.00  E-value=1.2e-46  Score=303.16  Aligned_cols=111  Identities=48%  Similarity=0.737  Sum_probs=106.1

Q ss_pred             ceEEEEeeceeEEEECCEEEeeECCeeEEEEecccCCCHHHHHH---------------------HHHcCCceEeecccc
Q 030046           37 MRAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDADADY---------------------VMQKKYGVLLVSQFT   95 (183)
Q Consensus        37 MRaVIQRV~~AsV~Vdgevvg~Ig~GLLvLVGI~k~DTeed~~~---------------------v~Dv~GeILvVSQFT   95 (183)
                      ||+|||||++|+|+|||+++++||+|+|+||||+++||+++++|                     +.|++||||+|||||
T Consensus         1 Mr~viQRV~~A~V~V~~~~v~~Ig~GllvlvGi~~~Dt~~~~~~~~~Kll~lRif~d~~gk~~~Sv~d~~gevL~VsQFT   80 (145)
T cd00563           1 MRAVIQRVSEASVTVDGEVVGAIGQGLLVLVGVTHDDTEEDAEYLARKILNLRIFEDEEGKMNLSVKDVNGEILVVSQFT   80 (145)
T ss_pred             CEEEEEEeceEEEEECCEEEEEECCcEEEEEEecCCCCHHHHHHHHHHHhheEcccCCCCCcccChhhcCCCEEEEEccc
Confidence            99999999999999999999999999999999999999999999                     678999999999999


Q ss_pred             ccccC-cCCCCCCCCCCCCCchHHHHHHHHHHHHhhCCCCceecccc---eeEEEEec
Q 030046           96 LYGIL-KGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNPDAIKGKCA---FQLHLVLR  149 (183)
Q Consensus        96 L~ad~-KGnRPsF~~Aa~Pe~A~~LYe~Fve~lr~~~~~~~Vk~G~F---mqv~lv~~  149 (183)
                      |||++ ||||||||.||+||.|++||++|+++|++.+  .+|++|+|   |+++++|+
T Consensus        81 L~~~~~KG~rP~F~~a~~~e~A~~ly~~fv~~l~~~~--~~V~~G~FGa~M~V~l~ND  136 (145)
T cd00563          81 LYADTKKGRRPSFSAAAPPDKAEPLYESFVELLREKG--IKVETGVFGAMMQVSLVND  136 (145)
T ss_pred             cccccCCCCCCCccccCCHHHHHHHHHHHHHHHHHcC--CcceeCccCCCcEEEEEEC
Confidence            99995 9999999999999999999999999999886  47999998   88888886

>PTZ00120 D-tyrosyl-tRNA(Tyr) deacylase; Provisional

Probab=100.00  E-value=3.6e-46  Score=302.98  Aligned_cols=113  Identities=57%  Similarity=0.882  Sum_probs=106.9

Q ss_pred             ceEEEEeeceeEEEECCEEEeeECCeeEEEEecccCCCHHHHHH----------------------HHHcCCceEeeccc
Q 030046           37 MRAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDADADY----------------------VMQKKYGVLLVSQF   94 (183)
Q Consensus        37 MRaVIQRV~~AsV~Vdgevvg~Ig~GLLvLVGI~k~DTeed~~~----------------------v~Dv~GeILvVSQF   94 (183)
                      ||+|||||++|+|+|||+++++||+|+|+||||+++||+++++|                      +.|++||||+||||
T Consensus         1 Mr~viQRV~~AsV~V~~~~v~~I~~GllvlvGi~~~Dt~~~~~~l~~Kil~lRiF~de~gk~~n~Sv~d~~geiL~VSQF   80 (154)
T PTZ00120          1 MRVVIQRVLSASVTVEGEVVGSIGKGLVLLVGIHEEDTWEDADYIIRKCLKLRLWPDEGGKMWDRSVKDKDYEVLVVSQF   80 (154)
T ss_pred             CEEEEEEeCeEEEEECCEEEEEECCceEEEEEEcCCCCHHHHHHHHHHHhheecccCCCCCcccCCHhhcCCCEEEEEcc
Confidence            99999999999999999999999999999999999999999999                      67889999999999


Q ss_pred             ccccc-CcCCCCCCCCCCCCCchHHHHHHHHHHHHhhCCCCceecccc---eeEEEEecc
Q 030046           95 TLYGI-LKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNPDAIKGKCA---FQLHLVLRS  150 (183)
Q Consensus        95 TL~ad-~KGnRPsF~~Aa~Pe~A~~LYe~Fve~lr~~~~~~~Vk~G~F---mqv~lv~~~  150 (183)
                      ||| | +||||||||.||+||+|++||++|+++|++.+++.+|++|+|   |+|+++|+=
T Consensus        81 TL~-~~~KG~RPsF~~aa~~~~A~~Ly~~f~~~l~~~~~~~~V~~G~FGa~M~V~l~NdG  139 (154)
T PTZ00120         81 TLF-NVKKGNKPDFHLAMSPEDALPLYNKFVEKFKKEYAPEKIKTGKFGQYMNVSLVNDG  139 (154)
T ss_pred             ccc-cCCCCCCCCccccCCHHHHHHHHHHHHHHHHhcCCCCccEECcCCCCcEEEEEECC
Confidence            999 8 599999999999999999999999999998875458999999   999999873

>PF02580 Tyr_Deacylase: D-Tyr-tRNA(Tyr) deacylase; InterPro: IPR003732 This homodimeric enzyme appears able to cleave any D-amino acid (and glycine, which does not have distinct D/L forms) from charged tRNA

Probab=100.00  E-value=7e-45  Score=292.32  Aligned_cols=111  Identities=50%  Similarity=0.772  Sum_probs=97.6

Q ss_pred             eEEEEeeceeEEEECCEEEeeECCeeEEEEecccCCCHHHHHH---------------------HHHcCCceEeeccccc
Q 030046           38 RAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDADADY---------------------VMQKKYGVLLVSQFTL   96 (183)
Q Consensus        38 RaVIQRV~~AsV~Vdgevvg~Ig~GLLvLVGI~k~DTeed~~~---------------------v~Dv~GeILvVSQFTL   96 (183)
                      |+|||||++|+|+|||+++++||+|+|+||||+++||+++++|                     ++|++||||+||||||
T Consensus         1 R~ViQRV~~A~V~V~~~~~~~Ig~Glvvlvgi~~~Dt~~~~~~~~~Kil~lRif~d~~gk~~~Sv~d~~geiL~VsQFTL   80 (145)
T PF02580_consen    1 RAVIQRVSSASVTVDGEVVSSIGRGLVVLVGIGKGDTEEDVDKMARKILNLRIFEDENGKWNLSVKDVGGEILLVSQFTL   80 (145)
T ss_dssp             EEEEEEEEEEEEEETTEEEEEESSEEEEEEEEBTT--HHHHHHHHHHHHHSEEEEETTSSEEEETTTTT-EEEEEE-GGG
T ss_pred             CEEEEEeCeEEEEECCEEEEEECCCcEEEEEEECCCCHHHHHHHHHhhceEEECcCcCCccceeHhhcccceEEEEeeee
Confidence            7999999999999999999999999999999999999999999                     5678999999999999


Q ss_pred             cccC-cCCCCCCCCCCCCCchHHHHHHHHHHHHhhCCCCceecccc---eeEEEEec
Q 030046           97 YGIL-KGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNPDAIKGKCA---FQLHLVLR  149 (183)
Q Consensus        97 ~ad~-KGnRPsF~~Aa~Pe~A~~LYe~Fve~lr~~~~~~~Vk~G~F---mqv~lv~~  149 (183)
                      ||++ ||||||||.||+||+|++||++|+++|++.++ .+|++|.|   |+++++|+
T Consensus        81 ~g~~~kG~rp~f~~a~~~~~a~~ly~~f~~~l~~~~~-~~V~~G~FGa~M~V~l~Nd  136 (145)
T PF02580_consen   81 YGDTKKGNRPSFHNAAPPEEAEELYERFVEKLREEYK-PKVKTGVFGADMQVSLVND  136 (145)
T ss_dssp             GSBCSSSSSEBGTTB--HHHHHHHHHHHHHHHHHHST-SCEEE--TTS-EEEEEEEE
T ss_pred             eeeccCCCCccccccCCHHHHHHHHHHHHHHHHHhCC-CceeECccCCeeEEEEEeC
Confidence            9995 99999999999999999999999999999985 58999998   88888875

The name reflects characterisation with respect to D-Tyr on tRNA(Tyr) as established in the literature, but substrate specificity seems much broader. ; GO: 0016788 hydrolase activity, acting on ester bonds, 0019478 D-amino acid catabolic process, 0005737 cytoplasm; PDB: 3LMU_F 3LMT_B 3KNF_B 3KOC_C 3KNP_D 3KO9_F 3KO3_B 3KO5_C 3KOB_D 3LMV_E ....

>KOG3323 consensus D-Tyr-tRNA (Tyr) deacylase [Translation, ribosomal structure and biogenesis]

Probab=100.00  E-value=2e-43  Score=284.36  Aligned_cols=113  Identities=52%  Similarity=0.754  Sum_probs=109.6

Q ss_pred             ceEEEEeeceeEEEECCEEEeeECCeeEEEEecccCCCHHHHHH----------------------HHHcCCceEeeccc
Q 030046           37 MRAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDADADY----------------------VMQKKYGVLLVSQF   94 (183)
Q Consensus        37 MRaVIQRV~~AsV~Vdgevvg~Ig~GLLvLVGI~k~DTeed~~~----------------------v~Dv~GeILvVSQF   94 (183)
                      ||+|||||++|||+|++++|++|++|+|+||||.++||++|++|                      ++|.+||||+||||
T Consensus         1 mkavlQrv~~AsvtV~~~~vs~I~~Gl~vlvgi~~~dt~ed~~kmvrkiLnlrlfe~es~k~w~ksv~dl~~eiL~VsQf   80 (149)
T KOG3323|consen    1 MKAVLQRVLRASVTVDDEQVSEIGRGLCVLVGISKDDTEEDLEKMVRKILNLRLFEDESGKGWKKSVMDLNGEILCVSQF   80 (149)
T ss_pred             ChHHHHHhhhheEEEcceeeeeecCceEEEEEEccCCCHHHHHHHHHHHhheeeccccccCcccchhhhCCCCEEEEEee
Confidence            89999999999999999999999999999999999999999999                      67899999999999


Q ss_pred             cccccCcCCCCCCCCCCCCCchHHHHHHHHHHHHhhCCCCceecccc---eeEEEEec
Q 030046           95 TLYGILKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNPDAIKGKCA---FQLHLVLR  149 (183)
Q Consensus        95 TL~ad~KGnRPsF~~Aa~Pe~A~~LYe~Fve~lr~~~~~~~Vk~G~F---mqv~lv~~  149 (183)
                      ||||..|||+|+||.||+|++|++||++|++.|++.|++++|++|.|   |+++++|+
T Consensus        81 TL~~rlKG~kpdfH~am~~~ea~elY~qfl~~l~k~~~~~~ikdG~fGamm~v~l~n~  138 (149)
T KOG3323|consen   81 TLYGRLKGNKPDFHLAMKGEEAKELYNQFLELLRKAYGADKIKDGKFGAMMQVHLVND  138 (149)
T ss_pred             eeeeeecCCCcchhhhcCchhhHHHHHHHHHHHHHHhCchhhhccccceEEEEEEecC
Confidence            99999999999999999999999999999999999999999999998   88888876

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	183
2okv_A	209	C-Myc Dna Unwinding Element Binding Protein Length		2e-17
3knf_A	164	Crystal Structure Of D-Tyr-Trna(Tyr) Deacylase From		2e-16
2dbo_A	148	Crystal Structure Of D-Tyr-Trna(Tyr) Deacylase From		7e-09
1jke_A	145	D-Tyr Trnatyr Deacylase From Escherichia Coli Lengt		1e-06

>pdb|2OKV|A Chain A, C-Myc Dna Unwinding Element Binding Protein Length = 209

Iteration: 1
 Score = 85.5 bits (210), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 43/107 (40%), Positives = 63/107 (58%), Gaps = 22/107 (20%)
Query: 53  GRLVSEIGPGLLVLVGLHEFDTDADADY----------------------VMQKKYGVLL 90
           G  +S IG G+ VL+G+   DT  + ++                      VM K+Y +L 
Sbjct: 17  GEQISAIGRGICVLLGISLEDTQKELEHMVRKILNLRVFEDESGKHWSKSVMDKQYEILC 76
Query: 91  VSQFTLYGILKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNPDAIK 137
           VSQFTL  +LKGNKPDFH+AMP ++A+ FY+S +++ RK+Y P+ IK
Sbjct: 77  VSQFTLQCVLKGNKPDFHLAMPTEQAEGFYNSFLEQLRKTYRPELIK 123

>pdb|3KNF|A Chain A, Crystal Structure Of D-Tyr-Trna(Tyr) Deacylase From Plasmodium Falciparum Length = 164

Iteration: 1
 Score = 81.6 bits (200), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 43/106 (40%), Positives = 62/106 (58%), Gaps = 22/106 (20%)
Query: 54  RLVSEIGPGLLVLVGLHEFDTDADADYVMQK---------------------KYGVLLVS 92
            ++SEI  GL+  +G+H+ DT  DA Y+++K                      Y +L+VS
Sbjct: 28  EIISEIKNGLICFLGIHKNDTWEDALYIIRKCLNLRLWNNDNKTWDKNVKDLNYELLIVS 87
Query: 93  QFTLYG-ILKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNPDAIK 137
           QFTL+G   KGNKPDFH+A  P +A  FY+ ++D+F+K YN D IK
Sbjct: 88  QFTLFGNTKKGNKPDFHLAKEPNEALIFYNKIIDEFKKQYNDDKIK 133

>pdb|2DBO|A Chain A, Crystal Structure Of D-Tyr-Trna(Tyr) Deacylase From Aquifex Aeolicus Length = 148

Iteration: 1
 Score = 56.6 bits (135), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 51/100 (51%), Gaps = 22/100 (22%)
Query: 53  GRLVSEIGPGLLVLVGLHEFDTDADADYVMQK---------------------KYGVLLV 91
           G++V  I  GL V +G+ + DT+ D + ++ K                     K  +L+V
Sbjct: 17  GKVVGSINEGLNVFLGVRKGDTEEDIEKLVNKILNLRIFEDERGKFQYSVLDIKGEILVV 76
Query: 92  SQFTLYG-ILKGNKPDFHVAMPPQKAKPFYDSLVDKFRKS 130
           SQFTLY  + KG +P F  A  P++AK  Y+  VDK ++S
Sbjct: 77  SQFTLYANVKKGRRPSFEEAEEPKRAKELYEKFVDKIKES 116

>pdb|1JKE|A Chain A, D-Tyr Trnatyr Deacylase From Escherichia Coli Length = 145

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 22/99 (22%)
Query: 53  GRLVSEIGPGLLVLVGLHEFDTDADADYVMQKKYG---------------------VLLV 91
           G +  EIG GLLVL+G+ + D +  A+ + ++  G                     VL+V
Sbjct: 17  GEVTGEIGAGLLVLLGVEKDDDEQKANRLCERVLGYRIFSDAEGKMNLNVQQAGGSVLVV 76
Query: 92  SQFTLYG-ILKGNKPDFHVAMPPQKAKPFYDSLVDKFRK 129
           SQFTL     +G +P F     P +A+  YD  V++ R+
Sbjct: 77  SQFTLAADTERGMRPSFSKGASPDRAEALYDYFVERCRQ 115

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	183
2okv_A	209	Probable D-tyrosyl-tRNA(Tyr) deacylase 1; DNA repl	2e-51
2dbo_A	148	D-tyrosyl-tRNA(Tyr) deacylase; D-amino acid, D-tyr	6e-47
3ko5_A	164	D-tyrosyl-tRNA(Tyr) deacylase; DTD, ADP, hydrolase	1e-45
1jke_A	145	O145, D-Tyr-trnaTyr deacylase, ORF_O145; beta-alph	3e-45
1j7g_A	144	D-tyrosyl-tRNA(Tyr) deacylase; D-Tyr-tRNA(Tyr) dea	2e-44
1tc5_A	194	Probable eukaryotic D-amino acid tRNA deacylase, L	1e-36

>2okv_A Probable D-tyrosyl-tRNA(Tyr) deacylase 1; DNA replication, DUE, ATPase, tRNA deacylase, hydrolase; 2.00A {Homo sapiens} Length = 209

 Score =  163 bits (414), Expect = 2e-51
 Identities = 54/123 (43%), Positives = 75/123 (60%), Gaps = 22/123 (17%)

Query: 37  MRAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDADADY---------------- 80
           M+AVVQRV  ASV V G  +S IG G+ VL+G+   DT  + ++                
Sbjct: 1   MKAVVQRVTRASVTVGGEQISAIGRGICVLLGISLEDTQKELEHMVRKILNLRVFEDESG 60

Query: 81  ------VMQKKYGVLLVSQFTLYGILKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNPD 134
                 VM K+Y +L VSQFTL  +LKGNKPDFH+AMP ++A+ FY+S +++ RK+Y P+
Sbjct: 61  KHWSKSVMDKQYEILCVSQFTLQCVLKGNKPDFHLAMPTEQAEGFYNSFLEQLRKTYRPE 120

Query: 135 AIK 137
            IK
Sbjct: 121 LIK 123

>2dbo_A D-tyrosyl-tRNA(Tyr) deacylase; D-amino acid, D-tyrosine, structural genomi NPPSFA, national project on protein structural and function analyses; 2.76A {Aquifex aeolicus} Length = 148

 Score =  149 bits (379), Expect = 6e-47
 Identities = 43/119 (36%), Positives = 63/119 (52%), Gaps = 22/119 (18%)

Query: 37  MRAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDADADY---------------- 80
           MRAV+QRV  + VEV+G++V  I  GL V +G+ + DT+ D +                 
Sbjct: 1   MRAVIQRVKKSWVEVDGKVVGSINEGLNVFLGVRKGDTEEDIEKLVNKILNLRIFEDERG 60

Query: 81  -----VMQKKYGVLLVSQFTLYG-ILKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNP 133
                V+  K  +L+VSQFTLY  + KG +P F  A  P++AK  Y+  VDK ++S   
Sbjct: 61  KFQYSVLDIKGEILVVSQFTLYANVKKGRRPSFEEAEEPKRAKELYEKFVDKIKESGLK 119

>3ko5_A D-tyrosyl-tRNA(Tyr) deacylase; DTD, ADP, hydrolase; HET: ADP; 2.09A {Plasmodium falciparum} PDB: 3knp_A 3knf_A* 3ko3_A* 3ko4_A* 3ko7_A* 3ko9_A* 3kob_A* 3koc_A* 3kod_A 3lmt_A 3lmu_A 3lmv_A* Length = 164

 Score =  146 bits (371), Expect = 1e-45
 Identities = 52/133 (39%), Positives = 70/133 (52%), Gaps = 32/133 (24%)

Query: 37  MRAVVQRVASASVEV----------EGRLVSEIGPGLLVLVGLHEFDTDADADY------ 80
           MR V+QRV  A + V          E  ++SEI  GL+  +G+H+ DT  DA Y      
Sbjct: 1   MRVVIQRVKGAILSVRKENIGENEKELEIISEIKNGLICFLGIHKNDTWEDALYIIRKCL 60

Query: 81  ---------------VMQKKYGVLLVSQFTLYG-ILKGNKPDFHVAMPPQKAKPFYDSLV 124
                          V    Y +L+VSQFTL+G   KGNKPDFH+A  P +A  FY+ ++
Sbjct: 61  NLRLWNNDNKTWDKNVKDLNYELLIVSQFTLFGNTKKGNKPDFHLAKEPNEALIFYNKII 120

Query: 125 DKFRKSYNPDAIK 137
           D+F+K YN D IK
Sbjct: 121 DEFKKQYNDDKIK 133

>1jke_A O145, D-Tyr-trnaTyr deacylase, ORF_O145; beta-alpha-barrel, hydrolase; 1.55A {Escherichia coli} SCOP: c.110.1.1 Length = 145

 Score =  145 bits (368), Expect = 3e-45
 Identities = 41/119 (34%), Positives = 57/119 (47%), Gaps = 22/119 (18%)

Query: 37  MRAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDADADY---------------- 80
           M A++QRV  ASV VEG +  EIG GLLVL+G+ + D +  A+                 
Sbjct: 1   MIALIQRVTRASVTVEGEVTGEIGAGLLVLLGVEKDDDEQKANRLCERVLGYRIFSDAEG 60

Query: 81  -----VMQKKYGVLLVSQFTLYGIL-KGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNP 133
                V Q    VL+VSQFTL     +G +P F     P +A+  YD  V++ R+    
Sbjct: 61  KMNLNVQQAGGSVLVVSQFTLAADTERGMRPSFSKGASPDRAEALYDYFVERCRQQEMN 119

>1j7g_A D-tyrosyl-tRNA(Tyr) deacylase; D-Tyr-tRNA(Tyr) deacylase, structural genomics, hypothetical structure 2 function project, S2F; 1.64A {Haemophilus influenzae rd KW20} SCOP: c.110.1.1 Length = 144

 Score =  143 bits (363), Expect = 2e-44
 Identities = 37/118 (31%), Positives = 54/118 (45%), Gaps = 22/118 (18%)

Query: 37  MRAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDADADY---------------- 80
           M A++QRV+ A V+V+G  + +IG GLLVL+G+ + D    AD                 
Sbjct: 1   MIALIQRVSQAKVDVKGETIGKIGKGLLVLLGVEKEDNREKADKLAEKVLNYRIFSDEND 60

Query: 81  -----VMQKKYGVLLVSQFTLYG-ILKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYN 132
                V Q +  +L+VSQFTL     KG +P F     P  A   Y+  + K  +   
Sbjct: 61  KMNLNVQQAQGELLIVSQFTLAADTQKGLRPSFSKGASPALANELYEYFIQKCAEKLP 118

>1tc5_A Probable eukaryotic D-amino acid tRNA deacylase, LMAJ005534AAA; SGPP, structural genomics, PSI; 1.93A {Leishmania major} SCOP: c.110.1.1 Length = 194

 Score =  124 bits (313), Expect = 1e-36
 Identities = 21/133 (15%), Positives = 39/133 (29%), Gaps = 32/133 (24%)

Query: 37  MRAVVQRVASASVEV-EGRLVSEIGPGLLVLVGL-----HEFDTDADADYVMQK------ 84
           +R ++Q +    + V         G G++V +           TD    + +        
Sbjct: 11  IRVMLQAMDQGHLLVNNVDKYVRAGRGVMVYIAFLSDRDSAPITDEALRHAVGVLLHTKI 70

Query: 85  --------------------KYGVLLVSQFTLYGILKGNKPDFHVAMPPQKAKPFYDSLV 124
                               +  +L+V Q +L G +KG    FH  +        YD   
Sbjct: 71  FTHFSPEKMINQPQSLEECPEMDILIVPQASLGGKVKGRSVQFHQLVAKDVGAALYDRFC 130

Query: 125 DKFRKSYNPDAIK 137
              R +   D  +
Sbjct: 131 HFVRVARGVDESR 143

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	183
1jke_A	145	O145, D-Tyr-trnaTyr deacylase, ORF_O145; beta-alph	100.0
1j7g_A	144	D-tyrosyl-tRNA(Tyr) deacylase; D-Tyr-tRNA(Tyr) dea	100.0
2dbo_A	148	D-tyrosyl-tRNA(Tyr) deacylase; D-amino acid, D-tyr	100.0
3ko5_A	164	D-tyrosyl-tRNA(Tyr) deacylase; DTD, ADP, hydrolase	100.0
2okv_A	209	Probable D-tyrosyl-tRNA(Tyr) deacylase 1; DNA repl	100.0
1tc5_A	194	Probable eukaryotic D-amino acid tRNA deacylase, L	100.0

>1jke_A O145, D-Tyr-trnaTyr deacylase, ORF_O145; beta-alpha-barrel, hydrolase; 1.55A {Escherichia coli} SCOP: c.110.1.1

Probab=100.00  E-value=2.3e-48  Score=312.32  Aligned_cols=111  Identities=40%  Similarity=0.567  Sum_probs=106.1

Q ss_pred             ceEEEEeeceeEEEECCEEEeeECCeeEEEEecccCCCHHHHHH---------------------HHHcCCceEeecccc
Q 030046           37 MRAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDADADY---------------------VMQKKYGVLLVSQFT   95 (183)
Q Consensus        37 MRaVIQRV~~AsV~Vdgevvg~Ig~GLLvLVGI~k~DTeed~~~---------------------v~Dv~GeILvVSQFT   95 (183)
                      ||+|||||++|||+|||+++++|++|+|+||||+++||++|++|                     ++|++|+||+|||||
T Consensus         1 MraviQRV~~AsV~Vdg~~vg~I~~GllvlvGv~~~Dt~~~~~~l~~Ki~~lRif~de~gkmn~Sv~d~~g~iL~VSQFT   80 (145)
T 1jke_A            1 MIALIQRVTRASVTVEGEVTGEIGAGLLVLLGVEKDDDEQKANRLCERVLGYRIFSDAEGKMNLNVQQAGGSVLVVSQFT   80 (145)
T ss_dssp             CEEEEEEEEEEEEEETTEEEEEESSEEEEEEECBTTCCHHHHHHHHHHHHHCCCEECTTSCEEECTTTTTCEEEEEECGG
T ss_pred             CEEEEEEECeEEEEECCEEEEEeCCeEEEEEEEeCCCCHHHHHHHHHHHhhEEeccCCCCCccCCHHHcCCCEEEEEccc
Confidence            99999999999999999999999999999999999999999999                     567899999999999


Q ss_pred             ccccC-cCCCCCCCCCCCCCchHHHHHHHHHHHHhhCCCCceecccc---eeEEEEec
Q 030046           96 LYGIL-KGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNPDAIKGKCA---FQLHLVLR  149 (183)
Q Consensus        96 L~ad~-KGnRPsF~~Aa~Pe~A~~LYe~Fve~lr~~~~~~~Vk~G~F---mqv~lv~~  149 (183)
                      ||||+ ||||||||.||+||+|++||++|+++|++.+  .+|++|+|   |+|+|+|+
T Consensus        81 L~ad~~KG~RPsF~~Aa~p~~A~~LY~~f~~~l~~~~--~~V~tG~FGA~M~V~l~ND  136 (145)
T 1jke_A           81 LAADTERGMRPSFSKGASPDRAEALYDYFVERCRQQE--MNTQTGRFAADMQVSLVND  136 (145)
T ss_dssp             GGSBCSSSSSCBCSSBCCHHHHHHHHHHHHHHHHHTT--CCEEECCTTSCEEEEEEEE
T ss_pred             cccccCCCCCCCccccCCHHHHHHHHHHHHHHHHhcC--CcceeCccCCCcEEEEEeC
Confidence            99995 9999999999999999999999999999875  47999999   99999987

>1j7g_A D-tyrosyl-tRNA(Tyr) deacylase; D-Tyr-tRNA(Tyr) deacylase, structural genomics, hypothetical structure 2 function project, S2F; 1.64A {Haemophilus influenzae rd KW20} SCOP: c.110.1.1

Probab=100.00  E-value=3.4e-48  Score=311.00  Aligned_cols=110  Identities=35%  Similarity=0.516  Sum_probs=105.4

Q ss_pred             ceEEEEeeceeEEEECCEEEeeECCeeEEEEecccCCCHHHHHH---------------------HHHcCCceEeecccc
Q 030046           37 MRAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDADADY---------------------VMQKKYGVLLVSQFT   95 (183)
Q Consensus        37 MRaVIQRV~~AsV~Vdgevvg~Ig~GLLvLVGI~k~DTeed~~~---------------------v~Dv~GeILvVSQFT   95 (183)
                      ||+|||||++|||+|||+++++|++|+|+||||+++||++|++|                     ++|++|+||+|||||
T Consensus         1 MraviQRV~~AsV~Vdg~~vg~I~~GllvlvGv~~~Dt~~~~~~l~~Kil~lRif~de~gkmn~Sv~d~~g~iL~VSQFT   80 (144)
T 1j7g_A            1 MIALIQRVSQAKVDVKGETIGKIGKGLLVLLGVEKEDNREKADKLAEKVLNYRIFSDENDKMNLNVQQAQGELLIVSQFT   80 (144)
T ss_dssp             CEEEEEEEEEEEEEETTEEEEEESSEEEEEEECBTTCCHHHHHHHHHHHHHCCCEECTTSCEEECTTTTTCEEEEEECGG
T ss_pred             CEEEEEEECeEEEEECCEEEEEECCeEEEEEEEeCCCCHHHHHHHHHHHhhEEeccCcCCCccCCHHHcCCCEEEEEccc
Confidence            99999999999999999999999999999999999999999999                     567899999999999


Q ss_pred             ccccC-cCCCCCCCCCCCCCchHHHHHHHHHHHHhhCCCCceecccc---eeEEEEec
Q 030046           96 LYGIL-KGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNPDAIKGKCA---FQLHLVLR  149 (183)
Q Consensus        96 L~ad~-KGnRPsF~~Aa~Pe~A~~LYe~Fve~lr~~~~~~~Vk~G~F---mqv~lv~~  149 (183)
                      ||||+ ||||||||.||+||+|++||++|+++|++.   .+|++|+|   |+|+++|+
T Consensus        81 L~ad~~KG~RPsF~~Aa~p~~A~~LY~~f~~~l~~~---~~V~tG~FGA~M~V~l~ND  135 (144)
T 1j7g_A           81 LAADTQKGLRPSFSKGASPALANELYEYFIQKCAEK---LPVSTGQFAADMQVSLTND  135 (144)
T ss_dssp             GGCBCSSTTSCBCTTBCCHHHHHHHHHHHHHHHHTT---SCEEECCTTSCCEEEEEEE
T ss_pred             cccccCCCCCCCccccCCHHHHHHHHHHHHHHHhcC---CCeeeCccCCCeEEEEEEC
Confidence            99995 999999999999999999999999999976   57999999   99999987

>2dbo_A D-tyrosyl-tRNA(Tyr) deacylase; D-amino acid, D-tyrosine, structural genomi NPPSFA, national project on protein structural and function analyses; 2.76A {Aquifex aeolicus}

Probab=100.00  E-value=4.1e-48  Score=311.71  Aligned_cols=112  Identities=38%  Similarity=0.600  Sum_probs=106.4

Q ss_pred             ceEEEEeeceeEEEECCEEEeeECCeeEEEEecccCCCHHHHHH---------------------HHHcCCceEeecccc
Q 030046           37 MRAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDADADY---------------------VMQKKYGVLLVSQFT   95 (183)
Q Consensus        37 MRaVIQRV~~AsV~Vdgevvg~Ig~GLLvLVGI~k~DTeed~~~---------------------v~Dv~GeILvVSQFT   95 (183)
                      ||+|||||++|||+|||+++++|++|+|+||||+++||+++++|                     ++|++|+||+|||||
T Consensus         1 MraviQRV~~AsV~Vdg~~vg~I~~GllvlvGv~~~Dt~~~~~~l~~Kil~lRif~De~gkmn~Sv~d~~g~iL~VSQFT   80 (148)
T 2dbo_A            1 MRAVIQRVKKSWVEVDGKVVGSINEGLNVFLGVRKGDTEEDIEKLVNKILNLRIFEDERGKFQYSVLDIKGEILVVSQFT   80 (148)
T ss_dssp             CEEEEEEEEEEEEEETTEEEEEESSEEEEEEECBTTCCHHHHHHHHHHHHHCCCBCCSSCSSCBCTTTTTCEEEEEECGG
T ss_pred             CEEEEEEECeEEEEECCEEEEEeCCeEEEEEEEeCCCCHHHHHHHHHHHhcEEeccCCCCCcccCHHHcCCCEEEEEeee
Confidence            99999999999999999999999999999999999999999999                     567899999999999


Q ss_pred             ccccC-cCCCCCCCCCCCCCchHHHHHHHHHHHHhhCCCCceecccc---eeEEEEecc
Q 030046           96 LYGIL-KGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNPDAIKGKCA---FQLHLVLRS  150 (183)
Q Consensus        96 L~ad~-KGnRPsF~~Aa~Pe~A~~LYe~Fve~lr~~~~~~~Vk~G~F---mqv~lv~~~  150 (183)
                      ||||+ ||||||||.||+||+|++||++|+++|++.+  .+|++|+|   |+|+|+|+=
T Consensus        81 L~ad~~KG~RPsF~~Aa~p~~A~~LY~~f~~~l~~~g--~~V~tG~FGA~M~V~l~NDG  137 (148)
T 2dbo_A           81 LYANVKKGRRPSFEEAEEPKRAKELYEKFVDKIKESG--LKVETGIFGAMMDVFIENWG  137 (148)
T ss_dssp             GGCBCSSSSSCBCTTBCCHHHHHHHHHHHHHHHHTTC--SCEEECCSSSCCEEEEEEEE
T ss_pred             cccccCCCCCCCccccCCHHHHHHHHHHHHHHHHhcC--CcceECccCCCcEEEEEECC
Confidence            99995 9999999999999999999999999999874  57999999   999999873

>3ko5_A D-tyrosyl-tRNA(Tyr) deacylase; DTD, ADP, hydrolase; HET: ADP; 2.09A {Plasmodium falciparum} PDB: 3knp_A 3knf_A* 3ko3_A* 3ko4_A* 3ko7_A* 3ko9_A* 3kob_A* 3koc_A* 3kod_A 3lmt_A 3lmu_A 3lmv_A*

Probab=100.00  E-value=2.9e-47  Score=310.84  Aligned_cols=113  Identities=46%  Similarity=0.737  Sum_probs=106.0

Q ss_pred             ceEEEEeeceeEEEE----CC------EEEeeECCeeEEEEecccCCCHHHHHH---------------------HHHcC
Q 030046           37 MRAVVQRVASASVEV----EG------RLVSEIGPGLLVLVGLHEFDTDADADY---------------------VMQKK   85 (183)
Q Consensus        37 MRaVIQRV~~AsV~V----dg------evvg~Ig~GLLvLVGI~k~DTeed~~~---------------------v~Dv~   85 (183)
                      ||+|||||++|||+|    ||      +++++||+|||+||||+++||+++++|                     ++|++
T Consensus         1 MraviQRV~~AsV~V~~~~dg~s~~~~~~vg~Ig~GllvlvGv~~~Dt~~~~~~l~~Kil~lRiF~de~gkmn~Sv~d~~   80 (164)
T 3ko5_A            1 MRVVIQRVKGAILSVRKENIGENEKELEIISEIKNGLICFLGIHKNDTWEDALYIIRKCLNLRLWNNDNKTWDKNVKDLN   80 (164)
T ss_dssp             CEEEEEEEEEEEEEEECC--------EEEEEEESSEEEEEEECBTTCCHHHHHHHHHHHHHCCCEEETTEEEEECTTTTT
T ss_pred             CEEEEEEeCeEEEEEeecCCCCccccceEEEEeCCceEEEEEEcCCCCHHHHHHHHHHHhcEEeecCCCcccccCHHHcC
Confidence            999999999999999    99      899999999999999999999999999                     46789


Q ss_pred             CceEeeccccccccC-cCCCCCCCCCCCCCchHHHHHHHHHHHHhhCCCCceecccc---eeEEEEec
Q 030046           86 YGVLLVSQFTLYGIL-KGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNPDAIKGKCA---FQLHLVLR  149 (183)
Q Consensus        86 GeILvVSQFTL~ad~-KGnRPsF~~Aa~Pe~A~~LYe~Fve~lr~~~~~~~Vk~G~F---mqv~lv~~  149 (183)
                      |+||+|||||||||+ ||||||||.||+||+|++||++|+++|++.+.+.+|++|+|   |+|+|+|+
T Consensus        81 G~iL~VSQFTL~ad~~KG~RPsF~~Aa~p~~A~~LY~~fv~~lr~~~~~~~V~tG~FGA~M~V~l~ND  148 (164)
T 3ko5_A           81 YELLIVSQFTLFGNTKKGNKPDFHLAKEPNEALIFYNKIIDEFKKQYNDDKIKIGKFGNYMNIDVTND  148 (164)
T ss_dssp             CEEEEEECGGGGCBCSSSSSCBCTTBCCHHHHHHHHHHHHHHHHHHSCTTSEEECCTTSCEEEEEEEE
T ss_pred             CCEEEEEccccccccCCCCCCcccccCCHHHHHHHHHHHHHHHHhhCCCCceEecccCCceEEEEEEC
Confidence            999999999999995 99999999999999999999999999998876578999999   99999986

>2okv_A Probable D-tyrosyl-tRNA(Tyr) deacylase 1; DNA replication, DUE, ATPase, tRNA deacylase, hydrolase; 2.00A {Homo sapiens}

Probab=100.00  E-value=1.1e-46  Score=317.24  Aligned_cols=121  Identities=47%  Similarity=0.751  Sum_probs=112.0

Q ss_pred             ceEEEEeeceeEEEECCEEEeeECCeeEEEEecccCCCHHHHHH----------------------HHHcCCceEeeccc
Q 030046           37 MRAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDADADY----------------------VMQKKYGVLLVSQF   94 (183)
Q Consensus        37 MRaVIQRV~~AsV~Vdgevvg~Ig~GLLvLVGI~k~DTeed~~~----------------------v~Dv~GeILvVSQF   94 (183)
                      ||+|||||++|+|+|||+++++|++|||+||||+++||++|++|                      |.|++|+||+||||
T Consensus         1 MRaViQRV~~AsV~Vdg~vvg~Ig~GllvLvGv~~~Dt~~d~~~la~Kil~LRIF~De~GK~mn~Sv~Dv~GeiLvVSQF   80 (209)
T 2okv_A            1 MKAVVQRVTRASVTVGGEQISAIGRGICVLLGISLEDTQKELEHMVRKILNLRVFEDESGKHWSKSVMDKQYEILCVSQF   80 (209)
T ss_dssp             CEEEEEEEEEEEEEETTEEEEEESSEEEEEEECBTTCCHHHHHHHHHHHHHCCCBCCTTCCTTCBCHHHHTCEEEEEECG
T ss_pred             CEEEEEEeCeEEEEECCEEEEEeCCeEEEEEEEeCCCCHHHHHHHHHHHhhEEeccCCCCCcccCCHHHcCCCEEEEEee
Confidence            99999999999999999999999999999999999999999999                      67889999999999


Q ss_pred             cccccCcCCCCCCCCCCCCCchHHHHHHHHHHHHhhCCCCceecccc---eeEEEEecc-cceeehh
Q 030046           95 TLYGILKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNPDAIKGKCA---FQLHLVLRS-FSFLYKS  157 (183)
Q Consensus        95 TL~ad~KGnRPsF~~Aa~Pe~A~~LYe~Fve~lr~~~~~~~Vk~G~F---mqv~lv~~~-~~~~~~~  157 (183)
                      |||||+||||||||.||+||.|++||++|++.|++.+.+.+|++|+|   |+|+|+|+= +.+++.|
T Consensus        81 TL~ad~KG~RPsF~~Aa~pe~A~~LYe~Fv~~lr~~~~~~~V~tG~FGA~M~V~LvNDGPVTi~lds  147 (209)
T 2okv_A           81 TLQCVLKGNKPDFHLAMPTEQAEGFYNSFLEQLRKTYRPELIKDGKFGAYMQVHIQNDGPVTIELES  147 (209)
T ss_dssp             GGSCCCSSSSCCCTTBCCHHHHHHHHHHHHHHHHHHSCGGGEEECCTTSCEEEEEEEEEEEEEEEEC
T ss_pred             eccccCCCCCCCccccCCHHHHHHHHHHHHHHHHHhCCCCccEeCcccCCcEEEEEeCCCEEEEEEC
Confidence            99999999999999999999999999999999998875457999999   999999874 4455443

>1tc5_A Probable eukaryotic D-amino acid tRNA deacylase, LMAJ005534AAA; SGPP, structural genomics, PSI; 1.93A {Leishmania major} SCOP: c.110.1.1

Probab=100.00  E-value=1.5e-42  Score=289.36  Aligned_cols=119  Identities=18%  Similarity=0.214  Sum_probs=108.8

Q ss_pred             cccccceEEEEeeceeEEEECCEE-EeeECCeeEEEEecccC-----CCHHHHHHH------------------------
Q 030046           32 RQINAMRAVVQRVASASVEVEGRL-VSEIGPGLLVLVGLHEF-----DTDADADYV------------------------   81 (183)
Q Consensus        32 ~~~~~MRaVIQRV~~AsV~Vdgev-vg~Ig~GLLvLVGI~k~-----DTeed~~~v------------------------   81 (183)
                      -|-++.|+|||||++|+|+|||++ +++||+|+|+||||+++     ||+++++|+                        
T Consensus         6 ~~~~~~r~viQRV~~AsV~Vdg~~~vg~Ig~Gllvlvgi~~~~~~~~Dt~~~~~~l~~Kil~lRIF~~~de~gkmn~~~S   85 (194)
T 1tc5_A            6 HHHMTIRVMLQAMDQGHLLVNNVDKYVRAGRGVMVYIAFLSDRDSAPITDEALRHAVGVLLHTKIFTHFSPEKMINQPQS   85 (194)
T ss_dssp             --CCEEEEEEEEESEEEEECSSSSCEEEECSEEEEEEEEECCTTCCCCCHHHHHHHHHHHHHSCCBSCSCTTCSSCCCBC
T ss_pred             ccceeEEEEEEEECeeEEEECCeEEEEEECCeEEEEEEEecCCCCCCCCHHHHHHHHHHhhcEEeccccCcccCcccCCC
Confidence            356789999999999999999999 99999999999999999     999999993                        


Q ss_pred             -HHcCC-ceEeeccccccccCcCCCCCCCCCCCCCchHHHHHHHHHHHHhhCC---------------------------
Q 030046           82 -MQKKY-GVLLVSQFTLYGILKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYN---------------------------  132 (183)
Q Consensus        82 -~Dv~G-eILvVSQFTL~ad~KGnRPsF~~Aa~Pe~A~~LYe~Fve~lr~~~~---------------------------  132 (183)
                       .|++| +||+||||||||++||||||||.||+||+|++||++||+.|++.++                           
T Consensus        86 v~D~~g~eiLvVSQFTL~g~~KGrrPsF~~Aa~pe~A~~LY~~Fv~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (194)
T 1tc5_A           86 LEECPEMDILIVPQASLGGKVKGRSVQFHQLVAKDVGAALYDRFCHFVRVARGVDESRVDANGAPRSEGDAPKAEGWIKY  165 (194)
T ss_dssp             STTCTTCEEEEEECGGGGCEEETTEEECTTBCCHHHHHHHHHHHHHHHHHHTTCCTTSBCTTSSBSSGGGSCCSSSCCCC
T ss_pred             hhhcCCCeEEEEEccccccccCCCCCCcccCCCHHHHHHHHHHHHHHHHHhhCccccccccccccccccccccccccccc
Confidence             24678 9999999999999999999999999999999999999999998852                           


Q ss_pred             CCceecccc---eeEEEEecc
Q 030046          133 PDAIKGKCA---FQLHLVLRS  150 (183)
Q Consensus       133 ~~~Vk~G~F---mqv~lv~~~  150 (183)
                      +.+|++|.|   |+++|+|+=
T Consensus       166 ~~~V~tG~FGa~M~V~l~NDG  186 (194)
T 1tc5_A          166 NSRVISGTFGNRQGLRFESEG  186 (194)
T ss_dssp             CSCEEECCTTSCCCEEEEESC
T ss_pred             CCceeECcccCCeEEEEEeCC
Confidence            468999999   999999873

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	183
d1tc5a_	187	c.110.1.1 (A:) probable eukaryotic D-amino acid tR	6e-35
d1jkea_	145	c.110.1.1 (A:) D-Tyr tRNAtyr deacylase, DTD {Esche	3e-31
d1j7ga_	144	c.110.1.1 (A:) D-Tyr tRNAtyr deacylase, DTD {Haemo	2e-28

>d1tc5a_ c.110.1.1 (A:) probable eukaryotic D-amino acid tRNA deacylase {Leishmania major [TaxId: 5664]} Length = 187

class: Alpha and beta proteins (a/b)
fold: DTD-like
superfamily: DTD-like
family: DTD-like
domain: probable eukaryotic D-amino acid tRNA deacylase
species: Leishmania major [TaxId: 5664]

 Score =  119 bits (299), Expect = 6e-35
 Identities = 21/133 (15%), Positives = 38/133 (28%), Gaps = 32/133 (24%)

Query: 36  AMRAVVQRVASASVEV-EGRLVSEIGPGLLVLVGLHE-----FDTDADADYVMQK----- 84
            +R ++Q +    + V         G G++V +           TD    + +       
Sbjct: 3   TIRVMLQAMDQGHLLVNNVDKYVRAGRGVMVYIAFLSDRDSAPITDEALRHAVGVLLHTK 62

Query: 85  ---------------------KYGVLLVSQFTLYGILKGNKPDFHVAMPPQKAKPFYDSL 123
                                +  +L+V Q +L G +KG    FH  +        YD  
Sbjct: 63  IFTHFSPEKMINQPQSLEECPEMDILIVPQASLGGKVKGRSVQFHQLVAKDVGAALYDRF 122

Query: 124 VDKFRKSYNPDAI 136
               R +   D  
Sbjct: 123 CHFVRVARGVDES 135

>d1jkea_ c.110.1.1 (A:) D-Tyr tRNAtyr deacylase, DTD {Escherichia coli [TaxId: 562]} Length = 145

class: Alpha and beta proteins (a/b)
fold: DTD-like
superfamily: DTD-like
family: DTD-like
domain: D-Tyr tRNAtyr deacylase, DTD
species: Escherichia coli [TaxId: 562]

 Score =  108 bits (271), Expect = 3e-31
 Identities = 41/119 (34%), Positives = 57/119 (47%), Gaps = 22/119 (18%)

Query: 37  MRAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDADADY---------------- 80
           M A++QRV  ASV VEG +  EIG GLLVL+G+ + D +  A+                 
Sbjct: 1   MIALIQRVTRASVTVEGEVTGEIGAGLLVLLGVEKDDDEQKANRLCERVLGYRIFSDAEG 60

Query: 81  -----VMQKKYGVLLVSQFTLYG-ILKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNP 133
                V Q    VL+VSQFTL     +G +P F     P +A+  YD  V++ R+    
Sbjct: 61  KMNLNVQQAGGSVLVVSQFTLAADTERGMRPSFSKGASPDRAEALYDYFVERCRQQEMN 119

>d1j7ga_ c.110.1.1 (A:) D-Tyr tRNAtyr deacylase, DTD {Haemophilus influenzae [TaxId: 727]} Length = 144

class: Alpha and beta proteins (a/b)
fold: DTD-like
superfamily: DTD-like
family: DTD-like
domain: D-Tyr tRNAtyr deacylase, DTD
species: Haemophilus influenzae [TaxId: 727]

 Score =  101 bits (252), Expect = 2e-28
 Identities = 37/118 (31%), Positives = 54/118 (45%), Gaps = 22/118 (18%)

Query: 37  MRAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDADADY---------------- 80
           M A++QRV+ A V+V+G  + +IG GLLVL+G+ + D    AD                 
Sbjct: 1   MIALIQRVSQAKVDVKGETIGKIGKGLLVLLGVEKEDNREKADKLAEKVLNYRIFSDEND 60

Query: 81  -----VMQKKYGVLLVSQFTLYG-ILKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYN 132
                V Q +  +L+VSQFTL     KG +P F     P  A   Y+  + K  +   
Sbjct: 61  KMNLNVQQAQGELLIVSQFTLAADTQKGLRPSFSKGASPALANELYEYFIQKCAEKLP 118

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	183
d1jkea_	145	D-Tyr tRNAtyr deacylase, DTD {Escherichia coli [Ta	100.0
d1j7ga_	144	D-Tyr tRNAtyr deacylase, DTD {Haemophilus influenz	100.0
d1tc5a_	187	probable eukaryotic D-amino acid tRNA deacylase {L	100.0

>d1jkea_ c.110.1.1 (A:) D-Tyr tRNAtyr deacylase, DTD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: DTD-like
superfamily: DTD-like
family: DTD-like
domain: D-Tyr tRNAtyr deacylase, DTD
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1e-47  Score=306.21  Aligned_cols=111  Identities=40%  Similarity=0.562  Sum_probs=105.9

Q ss_pred             ceEEEEeeceeEEEECCEEEeeECCeeEEEEecccCCCHHHHHH---------------------HHHcCCceEeecccc
Q 030046           37 MRAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDADADY---------------------VMQKKYGVLLVSQFT   95 (183)
Q Consensus        37 MRaVIQRV~~AsV~Vdgevvg~Ig~GLLvLVGI~k~DTeed~~~---------------------v~Dv~GeILvVSQFT   95 (183)
                      ||+|||||++|+|+|||+++++||+|+|+||||+++||+++++|                     +.|++||||+|||||
T Consensus         1 Mr~viQRV~~AsV~V~~~~v~~I~~Gll~lvgi~~~D~~~~~~~~~~Kil~lRiF~d~~gk~~~Sv~d~~geiLiVSQFT   80 (145)
T d1jkea_           1 MIALIQRVTRASVTVEGEVTGEIGAGLLVLLGVEKDDDEQKANRLCERVLGYRIFSDAEGKMNLNVQQAGGSVLVVSQFT   80 (145)
T ss_dssp             CEEEEEEEEEEEEEETTEEEEEESSEEEEEEECBTTCCHHHHHHHHHHHHHCCCEECTTSCEEECTTTTTCEEEEEECGG
T ss_pred             CEEEEEEeCeEEEEECCEEEEEeCCceEEEEEEecCCChHHHHHHHHHHhheeecccccCCccCCHhHcCCcEEEeeeee
Confidence            99999999999999999999999999999999999999999999                     577899999999999


Q ss_pred             cccc-CcCCCCCCCCCCCCCchHHHHHHHHHHHHhhCCCCceecccc---eeEEEEec
Q 030046           96 LYGI-LKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNPDAIKGKCA---FQLHLVLR  149 (183)
Q Consensus        96 L~ad-~KGnRPsF~~Aa~Pe~A~~LYe~Fve~lr~~~~~~~Vk~G~F---mqv~lv~~  149 (183)
                      |||+ +||||||||.||+||.|++||++|+++|++.+  .+|++|+|   |+|+++|+
T Consensus        81 L~a~~~KG~rPsF~~Aa~p~~A~~ly~~f~~~l~~~~--~~v~~G~FGA~M~V~l~ND  136 (145)
T d1jkea_          81 LAADTERGMRPSFSKGASPDRAEALYDYFVERCRQQE--MNTQTGRFAADMQVSLVND  136 (145)
T ss_dssp             GGSBCSSSSSCBCSSBCCHHHHHHHHHHHHHHHHHTT--CCEEECCTTSCEEEEEEEE
T ss_pred             eeeeecCCCCceecccCCHHHHHHHHHHHHHHHHhcC--CCceeCCCCCCcEEEEEEc
Confidence            9999 69999999999999999999999999999875  47999988   89999886

>d1j7ga_ c.110.1.1 (A:) D-Tyr tRNAtyr deacylase, DTD {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: DTD-like
superfamily: DTD-like
family: DTD-like
domain: D-Tyr tRNAtyr deacylase, DTD
species: Haemophilus influenzae [TaxId: 727]

Probab=100.00  E-value=4.7e-47  Score=302.17  Aligned_cols=110  Identities=35%  Similarity=0.527  Sum_probs=104.6

Q ss_pred             ceEEEEeeceeEEEECCEEEeeECCeeEEEEecccCCCHHHHHH---------------------HHHcCCceEeecccc
Q 030046           37 MRAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHEFDTDADADY---------------------VMQKKYGVLLVSQFT   95 (183)
Q Consensus        37 MRaVIQRV~~AsV~Vdgevvg~Ig~GLLvLVGI~k~DTeed~~~---------------------v~Dv~GeILvVSQFT   95 (183)
                      ||+|||||++|+|+|||+++++||+|||+||||+++||+++++|                     ++|++||||+|||||
T Consensus         1 Mr~viQRV~~AsV~V~~~~v~~I~~Gl~vlvgi~~~D~~~~~~~~~~Kil~lRiF~d~~gk~~~sv~d~~geiLvVSQFT   80 (144)
T d1j7ga_           1 MIALIQRVSQAKVDVKGETIGKIGKGLLVLLGVEKEDNREKADKLAEKVLNYRIFSDENDKMNLNVQQAQGELLIVSQFT   80 (144)
T ss_dssp             CEEEEEEEEEEEEEETTEEEEEESSEEEEEEECBTTCCHHHHHHHHHHHHHCCCEECTTSCEEECTTTTTCEEEEEECGG
T ss_pred             CEEEEEEeCeEEEEECCEEEEEECCCcEEEEEEcCCCChHHHHHHHHHHhheEeeCCCCcccccchhhCCCcEEEeeeee
Confidence            99999999999999999999999999999999999999999999                     577899999999999


Q ss_pred             cccc-CcCCCCCCCCCCCCCchHHHHHHHHHHHHhhCCCCceecccc---eeEEEEec
Q 030046           96 LYGI-LKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNPDAIKGKCA---FQLHLVLR  149 (183)
Q Consensus        96 L~ad-~KGnRPsF~~Aa~Pe~A~~LYe~Fve~lr~~~~~~~Vk~G~F---mqv~lv~~  149 (183)
                      |||+ +||||||||.||+|+.|++||++|++.|++.+   +|++|+|   |||+++|+
T Consensus        81 L~a~~~KG~RPsF~~Aa~p~~A~~ly~~fv~~l~~~~---~v~~G~FGa~M~V~l~Nd  135 (144)
T d1j7ga_          81 LAADTQKGLRPSFSKGASPALANELYEYFIQKCAEKL---PVSTGQFAADMQVSLTND  135 (144)
T ss_dssp             GGCBCSSTTSCBCTTBCCHHHHHHHHHHHHHHHHTTS---CEEECCTTSCCEEEEEEE
T ss_pred             eeeeecCCcceeeecccCHHHHHHHHHHHHHHHhcCC---CceeCEeCCCcEEEEEEC
Confidence            9999 69999999999999999999999999998764   5888888   99999986

>d1tc5a_ c.110.1.1 (A:) probable eukaryotic D-amino acid tRNA deacylase {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: DTD-like
superfamily: DTD-like
family: DTD-like
domain: probable eukaryotic D-amino acid tRNA deacylase
species: Leishmania major [TaxId: 5664]

Probab=100.00  E-value=3.3e-45  Score=301.77  Aligned_cols=115  Identities=18%  Similarity=0.241  Sum_probs=104.1

Q ss_pred             ccceEEEEeeceeEEEEC-CEEEeeECCeeEEEEecccCC-----CHHHHHHH-------------------------HH
Q 030046           35 NAMRAVVQRVASASVEVE-GRLVSEIGPGLLVLVGLHEFD-----TDADADYV-------------------------MQ   83 (183)
Q Consensus        35 ~~MRaVIQRV~~AsV~Vd-gevvg~Ig~GLLvLVGI~k~D-----Teed~~~v-------------------------~D   83 (183)
                      +.||+|||||++|+|+|| |+++++||+|||+||||+++|     |+++++|+                         .|
T Consensus         2 m~MR~vIQRV~~AsV~Vd~g~~v~~Ig~GLlvlvGi~k~D~~~~dte~~~~~l~~Kil~lRIF~de~gk~nl~~~~Sv~D   81 (187)
T d1tc5a_           2 MTIRVMLQAMDQGHLLVNNVDKYVRAGRGVMVYIAFLSDRDSAPITDEALRHAVGVLLHTKIFTHFSPEKMINQPQSLEE   81 (187)
T ss_dssp             CEEEEEEEEESEEEEECSSSSCEEEECSEEEEEEEEECCTTCCCCCHHHHHHHHHHHHHSCCBSCSCTTCSSCCCBCSTT
T ss_pred             ceEEEEEEEeCeEEEEECCCeEEEEECCceEEEEEEeeCCCcccChHHHHHHHHHHHhheEeecCCCccccccccccccc
Confidence            579999999999999997 789999999999999997765     68999993                         44


Q ss_pred             c-CCceEeeccccccccCcCCCCCCCCCCCCCchHHHHHHHHHHHHhhCCC---------------------------Cc
Q 030046           84 K-KYGVLLVSQFTLYGILKGNKPDFHVAMPPQKAKPFYDSLVDKFRKSYNP---------------------------DA  135 (183)
Q Consensus        84 v-~GeILvVSQFTL~ad~KGnRPsF~~Aa~Pe~A~~LYe~Fve~lr~~~~~---------------------------~~  135 (183)
                      + +||||+||||||||++||||||||.||+||.|++||++|++.|++.|++                           .+
T Consensus        82 i~G~eiLvVSQFTL~a~~KG~RPsF~~Aa~pe~A~~Ly~~fv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (187)
T d1tc5a_          82 CPEMDILIVPQASLGGKVKGRSVQFHQLVAKDVGAALYDRFCHFVRVARGVDESRVDANGAPRSEGDAPKAEGWIKYNSR  161 (187)
T ss_dssp             CTTCEEEEEECGGGGCEEETTEEECTTBCCHHHHHHHHHHHHHHHHHHTTCCTTSBCTTSSBSSGGGSCCSSSCCCCCSC
T ss_pred             cCCCeEEEEEeEEEEeecCCCCCChhhcCCHHHHHHHHHHHHHHHHHhccccccccccccccccccccccchhhhccCce
Confidence            4 4599999999999999999999999999999999999999999987653                           36


Q ss_pred             eecccc---eeEEEEec
Q 030046          136 IKGKCA---FQLHLVLR  149 (183)
Q Consensus       136 Vk~G~F---mqv~lv~~  149 (183)
                      |++|+|   |+++|+|+
T Consensus       162 V~~G~FGa~M~V~l~Nd  178 (187)
T d1tc5a_         162 VISGTFGNRQGLRFESE  178 (187)
T ss_dssp             EEECCTTSCCCEEEEES
T ss_pred             eeECCCCCCeEEEEEeC
Confidence            999999   99999987