Citrus Sinensis ID: 030070

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180---
Protein Sequence
MAPKHIELCLVLVLVTMLFHGAVAQSGCTTVLVGLAPCLNYITGNSSTPSSSCCSQLASVVQSQPRCLCSVLNSGGSSLGIAINQSQALALPGACNVQTPPASQCNTVNGPASSPVSPPADSSDEMQETPTSPPMPSIPSGSGSKTVPTADGSSSSGSIITMPLHFTVFILFLASCFSSAIKI
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHHHHHHHHccccccccHHHHccccccHHHHccccccccHHHHHHHHHHHHccccccccccccccccccccccHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHcccccccHcccccccccccHHHHHHHHHcccccEEEEEEccccccccEEEcHHHHHccccHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHccccc
Coil and Loop (DISEMBL)
MAPKHIELCLVLVLVTMLFHGAVAQSGCTTVLVGlapclnyitgnsstpsssccSQLASVVQSQPRCLCSVLNSGGSSLGIAINQsqalalpgacnvqtppasqcntvngpasspvsppadssdemqetptsppmpsipsgsgsktvptadgssssgsiitmpLHFTVFILFLASCFSSAIKI
Flexible Loop (DISEMBL)
MAPKHIELCLVLVLVTMLFHGAVAQSGCTTVLVGLAPCLNYITGNSSTPSSSCCSQLASVVQSQPRCLCSVLNSGGSSLGIAINQSQALALPGACNVQTPPASQCNTVNGPASSPVSPPADSSDEMQETPTSPPMPSIPSGSGSKTVPTADGSSSSGSIITMPLHFTVFILFLASCFSSAIKI
Low Complexity Region (SEG)
MAPKHIELCLVLVLVTMLFHGAVAQSGCTTVLVGLAPCLNYITGNsstpsssccsqlasvvqsqPRCLCSVLNSGGSSLGIAINQSQALALPGACNVQTPPASQCNTVNGpasspvsppadssdEMQEtptsppmpsipsgsgsKTVPTADGSSSSGSIITMPLHFTVFILFLASCFSSAIKI
Disordered region (IsUnstruct)
****HIELCLVLVLVTMLFHGAVAQSGCTTVLVGLAPCLNYITGN*******CCSQLASVVQSQPRCLCSVLNSGGSSLGIAINQSQALALPGACN**************************************************************IITMPLHFTVFILFLASCFSS****
Disordered Region (DISOPRED)
***KHIELCLVLVLVTMLFHGA****GCTTVLVGLAPCLNYITGNSSTPSSSCCSQLASVVQSQPRCLCSVLNSGGSSLGIAINQSQALALPGACNVQTPPAS***********************************************************PLHFTVFILFLASCFSSAIKI
Disordered Region (DISEMBL)
MAPKHIELCLVLVLVTMLFHGAVAQSGCTTVLVGLAPCLNYITGN******************QPRCLCSVLNSGGSSLGIAINQSQALALPGACNVQTPP*******************************************************GSIITMPLHFTVFILFLASCFSSAIKI
Disordered Region (DISPRO)
*APKHIELCLVLVLVTMLFHGAVAQSGCTTVLVGLAPCLNYITGNSSTPSSSCCSQLASVVQSQPRCLCSVLNSGGSSLGIAINQSQALALPGACNVQTPPASQCNTVNG**********************************************GSIITMPLHFTVFILFLASCFSSAIKI
Transmembrane Helix (TMHMM)
iiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHii
Transmembrane Helix (HMMTOP)
iiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHii
Transmembrane Helix (MEMSAT)
ooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MAPKHIELCLVLVLVTMLFHGAVAQSGCTTVLVGLAPCLNYITGNSSTPSSSCCSQLASVVQSQPRCLCSVLNSGGSSLGIAINQSQALALPGACNVQTPPASQCNTVNGPASSPVSPPADSSDEMQETPTSPPMPSIPSGSGSKTVPTADGSSSSGSIITMPLHFTVFILFLASCFSSAIKI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	183	2.2.26 [Sep-21-2011]
Q9ZQI8	169	Non-specific lipid-transf	no	no	0.846	0.917	0.306	4e-14
Q8VYI9	182	Non-specific lipid-transf	no	no	0.748	0.752	0.286	4e-10
Q9C7F7	193	Uncharacterized GPI-ancho	no	no	0.868	0.823	0.257	4e-07
Q9ZVC7	176	Xylogen-like protein 11 O	no	no	0.480	0.5	0.307	1e-06
Q9FFY3	151	Lipid transfer-like prote	no	no	0.508	0.615	0.357	3e-06
Q43119	116	Non-specific lipid-transf	N/A	no	0.431	0.681	0.358	1e-05
Q41073	123	Non-specific lipid-transf	N/A	no	0.502	0.747	0.336	3e-05
Q43767	115	Non-specific lipid-transf	N/A	no	0.491	0.782	0.339	3e-05
A0AT30	118	Non-specific lipid-transf	N/A	no	0.535	0.830	0.303	9e-05
Q43766	118	Non-specific lipid-transf	N/A	no	0.557	0.864	0.321	9e-05

>sp|Q9ZQI8|NLTL2_ARATH Non-specific lipid-transfer protein-like protein At2g13820 OS=Arabidopsis thaliana GN=At2g13820 PE=1 SV=1

 Score = 77.8 bits (190), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 54/176 (30%), Positives = 100/176 (56%), Gaps = 21/176 (11%)

Query: 10  LVLVLVTMLFHGAVAQSG--CTTVLVGLAPCLNYITGNSST--PSSSCCSQLASVVQSQP 65
           L++  V  L  G  A +   C+++++ +A CL+++T  S+   P  +CCS L +VV++ P
Sbjct: 7   LMIFSVVALMSGERAHAAVDCSSLILNMADCLSFVTSGSTVVKPEGTCCSGLKTVVRTGP 66

Query: 66  RCLCSVLNSGGSSLGIAINQSQALALPGACNVQTPPASQCN-TVNG--PASSP-VSPPAD 121
            CLC    + G SLG+ ++ S+A +LP  C V  PP+++C  +V+G  PA++P +SP A 
Sbjct: 67  ECLCEAFKNSG-SLGLTLDLSKAASLPSVCKVAAPPSARCGLSVSGDPPATAPGLSPTAG 125

Query: 122 SSDEMQETPTSPPMPSIPSGSGSKTVPTADGSSSSGSIITMPLHFTVFILFLASCF 177
           +             P++ SG+ + T P +   SS  S++++   F +F+  ++S +
Sbjct: 126 AG-----------APALSSGANAAT-PVSSPRSSDASLLSVSFAFVIFMALISSFY 169

Arabidopsis thaliana (taxid: 3702)

>sp|Q8VYI9|NLTL5_ARATH Non-specific lipid-transfer protein-like protein At5g64080 OS=Arabidopsis thaliana GN=At5g64080 PE=1 SV=1

 Score = 64.3 bits (155), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 77/150 (51%), Gaps = 13/150 (8%)

Query: 28  CTTVLVGLAPCLNYIT--GNSSTPSSSCCSQLASVVQSQPRCLCSVLNSGGSSLGIAINQ 85
           C+T+++ +A CL++++  G  + P  +CCS L +V+++  +CLC    S  +SLG+ +N 
Sbjct: 43  CSTLILNMADCLSFVSSGGTVAKPEGTCCSGLKTVLKADSQCLCEAFKSS-ASLGVTLNI 101

Query: 86  SQALALPGACNVQTPPASQCNTVNGPASSPVSPPADSSDEMQETPTSPPMPSIPSGSGSK 145
           ++A  LP AC +  P  + C     P+++P   P  ++   +      P PS     GS 
Sbjct: 102 TKASTLPAACKLHAPSIATCGLSVAPSTAPGLAPGVAAAGPETAGFLAPNPS-SGNDGSS 160

Query: 146 TVPTADGSSSSGSIITMPLHFTVFILFLAS 175
            +PT+          T  L   +F+LF +S
Sbjct: 161 LIPTS---------FTTVLSAVLFVLFFSS 181

Arabidopsis thaliana (taxid: 3702)

>sp|Q9C7F7|UGPI5_ARATH Uncharacterized GPI-anchored protein At1g27950 OS=Arabidopsis thaliana GN=At1g27950 PE=1 SV=1

 Score = 54.3 bits (129), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 49/190 (25%), Positives = 84/190 (44%), Gaps = 31/190 (16%)

Query: 8   LCLVLVLVTMLFHGAVAQ-----------SGCTTVLVGLAPCLNYITGNSSTPSSSCCSQ 56
           L L LVLVTM    ++A              C      +  CL++ TG ++ PS  CC  
Sbjct: 4   LHLHLVLVTMTIVASIAAAAPAAPGGALADECNQDFQKVTLCLDFATGKATIPSKKCCDA 63

Query: 57  LASVVQSQPRCLCSVL---NSGGSSL-GIAINQSQALALPGACNVQTPPASQCNTVNGPA 112
           +  + +  P+CLC V+    +GG +L  + + + + + LP +C +     + C  + G  
Sbjct: 64  VEDIKERDPKCLCFVIQQAKTGGQALKDLGVQEDKLIQLPTSCQLHNASITNCPKLLG-- 121

Query: 113 SSPVSPPADS-SDEMQETPTSP--PMPSIPSGSGSK--TVPTADGSS---------SSGS 158
            SP SP A   ++    TP +P    P+ P+ S  K  +    DG +         +   
Sbjct: 122 ISPSSPDAAVFTNNATTTPVAPAGKSPATPATSTDKGGSASAKDGHAVVALAVALMAVSF 181

Query: 159 IITMPLHFTV 168
           ++T+P H T+
Sbjct: 182 VLTLPRHVTL 191

Arabidopsis thaliana (taxid: 3702)

>sp|Q9ZVC7|XYP11_ARATH Xylogen-like protein 11 OS=Arabidopsis thaliana GN=XYP11 PE=1 SV=2

 Score = 53.1 bits (126), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 49/91 (53%), Gaps = 3/91 (3%)

Query: 28  CTTVLVGLAPCLNYIT--GNSSTPSSSCCSQLASVVQSQPRCLCSVLNSGGS-SLGIAIN 84
           C   ++ ++ C +Y+    N   P ++CC +LA +VQS P C+C++   G S   G+ ++
Sbjct: 40  CLVSMLNVSDCFSYVQVGSNEIKPEAACCPELAGMVQSSPECVCNLYGGGASPRFGVKLD 99

Query: 85  QSQALALPGACNVQTPPASQCNTVNGPASSP 115
           + +A  L   C V+ P  S C+ +  P  SP
Sbjct: 100 KQRAEQLSTICGVKAPSPSLCSVLGFPTISP 130

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FFY3|VAS_ARATH Lipid transfer-like protein VAS OS=Arabidopsis thaliana GN=VAS PE=2 SV=1

 Score = 51.2 bits (121), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 54/109 (49%), Gaps = 16/109 (14%)

Query: 1   MAPKHIELCLVLVLVT----MLFHGAVAQSGCTTVLVGLAPCLNYITGNSSTPSSSCCSQ 56
           M  K     +VL+LV     M  +G   QS   + L  LAPCLNY+ G    P   CC+ 
Sbjct: 3   MGMKFFSFYVVLLLVAASSGMRING---QS--VSCLNQLAPCLNYLNGTKEVPQV-CCNP 56

Query: 57  LASVVQSQPRCLCSVLNSGGSS----LGIAINQSQALALPGACNVQTPP 101
           L SV+++ P CLC ++++  SS     GI +N +Q   LP  C     P
Sbjct: 57  LKSVIRNNPECLCRMISNRWSSQAERAGIDVNDAQ--MLPARCGEHVNP 103

Promotes the number of phloem (pro)cambial and pericycle cells.

Arabidopsis thaliana (taxid: 3702)

>sp|Q43119|NLTPD_RICCO Non-specific lipid-transfer protein D, cotyledon-specific isoform OS=Ricinus communis PE=3 SV=1

 Score = 49.7 bits (117), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 13/92 (14%)

Query: 28  CTTVLVGLAPCLNYITGNSSTPSSSCCS---QLASVVQS--QPRCLCSVLNSGGSSLGIA 82
           C+TV +  A C+ + TG  S PSS+CC+   QLA  V+S    + +C  L +   SLGI 
Sbjct: 28  CSTVDMKAAACVGFATGKDSKPSSACCTGLQQLAQTVKSVDDKKAICRCLKASSKSLGI- 86

Query: 83  INQSQALA-LPGACNVQ----TPPASQCNTVN 109
             + Q L+ +P ACN++       A+ C T++
Sbjct: 87  --KDQFLSKIPAACNIKVGFPVSTATNCETIH 116

Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues.

Ricinus communis (taxid: 3988)

>sp|Q41073|NLTP_PINTA Non-specific lipid-transfer protein OS=Pinus taeda PE=2 SV=1

 Score = 48.5 bits (114), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 54/104 (51%), Gaps = 12/104 (11%)

Query: 4   KHIELCLV--LVLVTMLFHGAVAQSG---CTTVLVGLAPCLNYITGNSSTPSSSCC---S 55
           K +E   V  LV+  M   GAV   G   C  V+  + PC  Y+ GN++TP+++CC    
Sbjct: 5   KMVEAVFVVGLVVTMMNVWGAVPVEGAISCNQVVSAMTPCATYLIGNAATPAATCCPSIR 64

Query: 56  QLASVVQSQP--RCLCSVLNSGGSSLGIAINQSQALALPGACNV 97
            L S V++ P  + +C+ L +   S G+ +   +A  LPG C V
Sbjct: 65  GLDSQVKATPDRQAVCNCLKTQAKSYGVKL--GKAANLPGLCKV 106

Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues.

Pinus taeda (taxid: 3352)

>sp|Q43767|NLT41_HORVU Non-specific lipid-transfer protein 4.1 OS=Hordeum vulgare GN=LTP4.1 PE=1 SV=1

 Score = 48.1 bits (113), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 49/103 (47%), Gaps = 13/103 (12%)

Query: 7   ELCLVLVLVTMLFHGAVAQSGCTTVLVGLAPCLNYITGNSSTPSSSCCS---QLASVVQS 63
           +L LV ++  ML   A A   C  V   L+PC++Y  GN + P ++CCS   +LA   QS
Sbjct: 8   QLVLVALVAAMLLVAADAAISCGQVSSALSPCISYARGNGAKPPAACCSGVKRLAGAAQS 67

Query: 64  ----QPRCLCSVLNSGGSSLGIAINQSQALALPGACNVQTPPA 102
               Q  C C    +GG      +N  +A  +P  C V  P A
Sbjct: 68  TADKQAACKCIKSAAGG------LNAGKAAGIPSMCGVSVPYA 104

Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues.

Hordeum vulgare (taxid: 4513)

>sp|A0AT30|NLTP3_LENCU Non-specific lipid-transfer protein 3 OS=Lens culinaris PE=3 SV=1

 Score = 46.6 bits (109), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 58/112 (51%), Gaps = 14/112 (12%)

Query: 6   IELCLVLVLVTMLFHGAVAQSGCTTVLVGLAPCLNYITGNSSTPSSSCCSQLASVVQSQP 65
           + L + +V++  +   AV+   C TV   LAPC+ Y+TG +  P+ SCC+ +  ++ + P
Sbjct: 10  VALVMCMVVIAPMAEAAVS---CGTVTGDLAPCIPYLTGGAG-PTDSCCAGVKKLLAAAP 65

Query: 66  -----RCLCSVLNSGGSSLGIAINQSQALALPGACNVQTP----PASQCNTV 108
                +  C+ L +   ++   +N   A ALPG CNV  P      + CNT+
Sbjct: 66  TTADRQAACNCLKTAAGNIN-NLNPGNAAALPGKCNVNIPYKISTTTNCNTI 116

Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues.

Lens culinaris (taxid: 3864)

>sp|Q43766|NLTP3_HORVU Non-specific lipid-transfer protein 3 OS=Hordeum vulgare GN=LTP3 PE=3 SV=1

 Score = 46.6 bits (109), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 53/112 (47%), Gaps = 10/112 (8%)

Query: 7   ELCLVLVLVTMLFHGAVAQSGCTTVLVGLAPCLNYITGNSSTPSSSCCS---QLASVVQS 63
           +L LV ++  ML     A   C  V   L+PC++Y  GN + P  +CCS   +LA   QS
Sbjct: 8   QLVLVAMVAAMLLVATDAAISCGQVSSALSPCISYARGNGAKPPVACCSGVKRLAGAAQS 67

Query: 64  --QPRCLCSVLNSGGSSLGIAINQSQALALPGACNVQTP----PASQCNTVN 109
               +  C  L S  +S+   IN  +   +PG C V  P     ++ CN V+
Sbjct: 68  TADKQAACRCLKSLATSIK-GINMGKVSGVPGKCGVSVPFPISMSTDCNKVH 118

Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues.

Hordeum vulgare (taxid: 4513)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	183
255567560	187	lipid binding protein, putative [Ricinus	0.994	0.973	0.654	3e-54
296085219	303	unnamed protein product [Vitis vinifera]	0.857	0.518	0.683	4e-47
359479641	187	PREDICTED: non-specific lipid-transfer p	0.857	0.839	0.683	2e-46
351734500	186	uncharacterized protein LOC100306151 pre	0.961	0.946	0.558	3e-46
388510816	159	unknown [Lotus japonicus]	0.857	0.987	0.603	2e-44
255567554	207	Nonspecific lipid-transfer protein precu	0.945	0.835	0.522	4e-44
359479639	163	PREDICTED: non-specific lipid-transfer p	0.890	1.0	0.546	1e-43
388517463	169	unknown [Lotus japonicus]	0.901	0.976	0.565	6e-43
449513419	169	PREDICTED: non-specific lipid-transfer p	0.907	0.982	0.556	2e-42
449432688	169	PREDICTED: non-specific lipid-transfer p	0.907	0.982	0.556	3e-42

>gi|255567560|ref|XP_002524759.1| lipid binding protein, putative [Ricinus communis] gi|223535943|gb|EEF37602.1| lipid binding protein, putative [Ricinus communis]

 Score =  216 bits (551), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 123/188 (65%), Positives = 150/188 (79%), Gaps = 6/188 (3%)

Query: 1   MAPKHIELCLVLVLVTMLFHGAVAQSGCTTVLVGLAPCLNYITGNSSTPSSSCCSQLASV 60
           MA K +E+   LVLV M+ HGAVAQSGCT+ L+GLAPCLNY+TGNSSTPSSSCCSQLA+V
Sbjct: 1   MALKRVEMIAFLVLVMMICHGAVAQSGCTSALMGLAPCLNYVTGNSSTPSSSCCSQLATV 60

Query: 61  VQSQPRCLCSVLNSGGSSLGIAINQSQALALPGACNVQTPPASQCNTV-NGPASSPV--- 116
           VQSQP+CLC++LN GGSSLGI INQ+ AL+LPGACNVQTPP SQCN   NGPA+SP+   
Sbjct: 61  VQSQPQCLCAMLNGGGSSLGITINQTLALSLPGACNVQTPPVSQCNAANNGPATSPIGSP 120

Query: 117 -SPPADSSDEMQETPTSPPMPSIPSGSGSKTVPTADGSSSSGSIITMPLHFTVFILFLAS 175
            +PPADSSD+  ETP +P +PS P+G GSK VP A G+S++ SI  + LH T+F +F AS
Sbjct: 121 LTPPADSSDDTPETPNTPSIPSFPAGGGSKIVPAAGGTSAA-SITRIQLHLTIFTIFTAS 179

Query: 176 CFSSAIKI 183
           C S+ I+ 
Sbjct: 180 CASNVIRF 187

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296085219|emb|CBI28714.3| unnamed protein product [Vitis vinifera]

 Score =  192 bits (488), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 110/161 (68%), Positives = 133/161 (82%), Gaps = 4/161 (2%)

Query: 19  FHGAVAQSGCTTVLVGLAPCLNYITGNSSTPSSSCCSQLASVVQSQPRCLCSVLNSGGSS 78
           +HGA+AQSGCT VL+GLAPCLNYI+GNSSTPSSSCCSQLA+VVQSQP+CLC+ LNSGG+ 
Sbjct: 135 WHGAMAQSGCTRVLIGLAPCLNYISGNSSTPSSSCCSQLANVVQSQPQCLCAALNSGGAG 194

Query: 79  LGIAINQSQALALPGACNVQTPPASQCNTVNGPASSPVSP---PADSSDEMQE-TPTSPP 134
           LGI INQ+ AL LPGACNV+TP  SQCN  NGP +S +SP   PADSSDE  + TPT+  
Sbjct: 195 LGITINQTLALQLPGACNVKTPSVSQCNAANGPTASAISPESSPADSSDETPDVTPTTQS 254

Query: 135 MPSIPSGSGSKTVPTADGSSSSGSIITMPLHFTVFILFLAS 175
           +PSIPSG+GSK+VP  DGS+S G+I+ +PL  T+  LF+AS
Sbjct: 255 LPSIPSGTGSKSVPATDGSTSDGTIMELPLTLTILALFIAS 295

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359479641|ref|XP_003632313.1| PREDICTED: non-specific lipid-transfer protein-like protein At2g13820-like [Vitis vinifera]

 Score =  191 bits (484), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 110/161 (68%), Positives = 133/161 (82%), Gaps = 4/161 (2%)

Query: 19  FHGAVAQSGCTTVLVGLAPCLNYITGNSSTPSSSCCSQLASVVQSQPRCLCSVLNSGGSS 78
           +HGA+AQSGCT VL+GLAPCLNYI+GNSSTPSSSCCSQLA+VVQSQP+CLC+ LNSGG+ 
Sbjct: 19  WHGAMAQSGCTRVLIGLAPCLNYISGNSSTPSSSCCSQLANVVQSQPQCLCAALNSGGAG 78

Query: 79  LGIAINQSQALALPGACNVQTPPASQCNTVNGPASSPVSP---PADSSDEMQE-TPTSPP 134
           LGI INQ+ AL LPGACNV+TP  SQCN  NGP +S +SP   PADSSDE  + TPT+  
Sbjct: 79  LGITINQTLALQLPGACNVKTPSVSQCNAANGPTASAISPESSPADSSDETPDVTPTTQS 138

Query: 135 MPSIPSGSGSKTVPTADGSSSSGSIITMPLHFTVFILFLAS 175
           +PSIPSG+GSK+VP  DGS+S G+I+ +PL  T+  LF+AS
Sbjct: 139 LPSIPSGTGSKSVPATDGSTSDGTIMELPLTLTILALFIAS 179

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351734500|ref|NP_001238368.1| uncharacterized protein LOC100306151 precursor [Glycine max] gi|255627693|gb|ACU14191.1| unknown [Glycine max]

 Score =  189 bits (481), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 100/179 (55%), Positives = 125/179 (69%), Gaps = 3/179 (1%)

Query: 1   MAPKHIELCLVLVLVTMLFHGAVAQSGCTTVLVGLAPCLNYITGNSSTPSSSCCSQLASV 60
           MA +   LCLV V+V  ++    AQSGCT  L  L+PCLNYI G+S TPS+SCCSQL+S+
Sbjct: 1   MAFRGFALCLVAVIVATMWSQNAAQSGCTNTLTSLSPCLNYIMGSSPTPSASCCSQLSSI 60

Query: 61  VQSQPRCLCSVLNSGGSSLGIAINQSQALALPGACNVQTPPASQCNTVNG---PASSPVS 117
           VQS P+CLCSVLN GGS+ GI INQ+ AL+LPGAC VQTPP SQC   NG   P+++PV 
Sbjct: 61  VQSSPQCLCSVLNGGGSTFGITINQTLALSLPGACEVQTPPVSQCQAGNGPTTPSTAPVG 120

Query: 118 PPADSSDEMQETPTSPPMPSIPSGSGSKTVPTADGSSSSGSIITMPLHFTVFILFLASC 176
            P+ SS E  +   +P     PSG+GSKTVP+ DG SS GS I +P H  +++L L SC
Sbjct: 121 SPSGSSAESPQGSITPSALDFPSGAGSKTVPSIDGGSSDGSAIKVPFHLVLYLLALVSC 179

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388510816|gb|AFK43474.1| unknown [Lotus japonicus]

 Score =  183 bits (465), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 108/179 (60%), Positives = 125/179 (69%), Gaps = 22/179 (12%)

Query: 1   MAPKHIELCLVLVLVTMLFHGAVAQSGCTTVLVGLAPCLNYITGNSSTPSSSCCSQLASV 60
           MA   + + LVLV++ +L  GA AQS CT+VLV L+PCLNYITGNSSTPSS CCSQLASV
Sbjct: 1   MAQTKMVMGLVLVVIAILCVGAAAQSSCTSVLVNLSPCLNYITGNSSTPSSGCCSQLASV 60

Query: 61  VQSQPRCLCSVLNSGGSSLGIAINQSQALALPGACNVQTPPASQCNTVNGPASSPVSPPA 120
           V+SQP+CLC VLN GGSSLGI+INQ+QALALP ACNVQTPP SQCN    PA SP     
Sbjct: 61  VRSQPQCLCQVLNGGGSSLGISINQTQALALPSACNVQTPPTSQCNAAATPADSP----- 115

Query: 121 DSSDEMQETPTSPPMPSIPSGSGSKTVPTADGSSSSGSII--TMPLHFTVFILFLASCF 177
            +SD              PSG+GS+TVPT D  SSSG+ I  ++PL F VF    AS F
Sbjct: 116 -NSD--------------PSGTGSRTVPTPDDGSSSGNSIKLSIPLLFIVFAATYASTF 159

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255567554|ref|XP_002524756.1| Nonspecific lipid-transfer protein precursor, putative [Ricinus communis] gi|223535940|gb|EEF37599.1| Nonspecific lipid-transfer protein precursor, putative [Ricinus communis]

 Score =  182 bits (463), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 103/197 (52%), Positives = 128/197 (64%), Gaps = 24/197 (12%)

Query: 1   MAPKHIELCLVLVLVTMLFHGAVAQSGCTTVLVGLAPCLNYITGNSSTPSSSCCSQLASV 60
           MA   I + LVLVLVTM++ GA+AQSGC +V+  LA CLNYITGNSSTPS+SCCS LA+V
Sbjct: 1   MASSRIRIGLVLVLVTMIYGGAMAQSGCNSVVTNLASCLNYITGNSSTPSASCCSNLANV 60

Query: 61  VQSQPRCLCSVLNSGGSSLGIAINQSQALALPGACNVQTPPASQCN-------------- 106
           VQS P+CLCS+LN+ G SLGI INQ+ AL+LPGAC VQTPP SQC               
Sbjct: 61  VQSSPQCLCSLLNNSGPSLGITINQTLALSLPGACKVQTPPISQCKAATAPTISAAPPTS 120

Query: 107 ------TVNGPASSPVSPPADSSDEMQETPTSPPMPSIP----SGSGSKTVPTADGSSSS 156
                 +V  P SSP + P  SS+E  E   +P   ++P    +G+GSKT+P+    +S 
Sbjct: 121 AASPTTSVTPPVSSPTNSPPGSSNETPEPAITPSASNVPPSSGTGAGSKTIPSTTDGTSD 180

Query: 157 GSIITMPLHFTVFILFL 173
           GSII  PLHF +   FL
Sbjct: 181 GSIIKAPLHFMLLAFFL 197

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359479639|ref|XP_003632312.1| PREDICTED: non-specific lipid-transfer protein-like protein At2g13820-like [Vitis vinifera] gi|296085218|emb|CBI28713.3| unnamed protein product [Vitis vinifera]

 Score =  181 bits (459), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 100/183 (54%), Positives = 123/183 (67%), Gaps = 20/183 (10%)

Query: 1   MAPKHIELCLVLVLVTMLFHGAVAQSGCTTVLVGLAPCLNYITGNSSTPSSSCCSQLASV 60
           MA   +E  L ++LV  L+ GA+AQS CT V++ ++PCLNYITGNSSTPSS CC+QLASV
Sbjct: 1   MAEPRMETVLTMILVASLWAGAMAQSSCTNVIISMSPCLNYITGNSSTPSSGCCTQLASV 60

Query: 61  VQSQPRCLCSVLNSGGSSLGIAINQSQALALPGACNVQTPPASQCNTVNGPASSPVSPPA 120
           V+SQP+CLC VLN GGSSLGI INQ+QALALP AC+VQTPP S+CN     ASSP   PA
Sbjct: 61  VRSQPQCLCEVLNGGGSSLGIQINQTQALALPTACSVQTPPISRCN-----ASSPADSPA 115

Query: 121 DSSDEMQETPTSPPMPSIPSGSGSKTVPTADGSSSSGSIITMPLHFTVFILFLASCFSSA 180
            + +               SGS SKTVP  +G SS G+ I  P   T F++F ASC ++ 
Sbjct: 116 GTPN---------------SGSRSKTVPATNGDSSDGTSIKSPFSLTSFLVFFASCAATF 160

Query: 181 IKI 183
             I
Sbjct: 161 TSI 163

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388517463|gb|AFK46793.1| unknown [Lotus japonicus]

 Score =  179 bits (453), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 104/184 (56%), Positives = 128/184 (69%), Gaps = 19/184 (10%)

Query: 1   MAPKHIELCLVLVLVTMLFHGAVAQSGCTTVLVGLAPCLNYITGNSSTPSSSCCSQLASV 60
           MA + + + L+LV++ ML  G  AQS C  VLV L+PCLNYITGNSSTPSS CCSQLA+V
Sbjct: 1   MAHRKMNMGLILVVMAMLCAGVAAQSSCANVLVSLSPCLNYITGNSSTPSSGCCSQLAAV 60

Query: 61  VQSQPRCLCSVLNSGGSSLGIAINQSQALALPGACNVQTPPASQCNTVNGPASSPVSPPA 120
           V+SQP+CLC VL  G SSLGI INQ+QALALPGAC VQTPP SQCNT   PA+SP  P A
Sbjct: 61  VRSQPQCLCQVLGGGASSLGININQTQALALPGACKVQTPPTSQCNTAATPANSPEEPAA 120

Query: 121 DSSDEMQETPTSPPMPSIPSGSGSKTVP-TADGSSSSGSI-ITMPLHFTVFILFLASCFS 178
           +S +            S PSG+GSK+ P T DGSSS  SI +++PL     +L LA+ ++
Sbjct: 121 ESPN------------SGPSGTGSKSTPTTGDGSSSGNSIKLSIPL-----LLVLAATYA 163

Query: 179 SAIK 182
           S  +
Sbjct: 164 STFR 167

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449513419|ref|XP_004164321.1| PREDICTED: non-specific lipid-transfer protein-like protein At2g13820-like [Cucumis sativus]

 Score =  177 bits (448), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 103/185 (55%), Positives = 127/185 (68%), Gaps = 19/185 (10%)

Query: 1   MAPKHIELCLVLVLVTMLFHGAVAQSGCTTVLVGLAPCLNYITGNSSTPSSSCCSQLASV 60
           M    + + LV V+V + + GA AQS CT VL+ +APCLNYITGNSSTPS SCC+QL++V
Sbjct: 1   MEYTRMVVGLVAVIVAVHWAGAAAQSDCTNVLISMAPCLNYITGNSSTPSQSCCTQLSNV 60

Query: 61  VQSQPRCLCSVLNSGGSSLGIAINQSQALALPGACNVQTPPASQCNTVNGPASSPVSPPA 120
           V+S P+CLC VLN GGSSLG+ INQ+QALALP ACNVQTP  S CN V+ PA SP   P 
Sbjct: 61  VRSNPQCLCQVLNGGGSSLGVNINQTQALALPQACNVQTPSVSSCN-VDSPADSPAGAP- 118

Query: 121 DSSDEMQETPTSPPMPSIPSGSGSKTVPTADGSSSSGSIITM--PLHFTVFILFLASCFS 178
           DSS+             +PSG+GSKTVP+ D  SS GS I M  PL F++    LAS ++
Sbjct: 119 DSSNN------------VPSGTGSKTVPSTDNGSSDGSSIHMSKPLLFSI---LLASIYA 163

Query: 179 SAIKI 183
           SA K+
Sbjct: 164 SAFKL 168

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449432688|ref|XP_004134131.1| PREDICTED: non-specific lipid-transfer protein-like protein At2g13820-like [Cucumis sativus]

 Score =  176 bits (447), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 103/185 (55%), Positives = 127/185 (68%), Gaps = 19/185 (10%)

Query: 1   MAPKHIELCLVLVLVTMLFHGAVAQSGCTTVLVGLAPCLNYITGNSSTPSSSCCSQLASV 60
           M    + + LV V+V + + GA AQS CT VL+ +APCLNYITGNSSTPS SCC+QL++V
Sbjct: 1   MEYTRMVVGLVAVIVAVHWAGAAAQSDCTNVLISMAPCLNYITGNSSTPSQSCCTQLSNV 60

Query: 61  VQSQPRCLCSVLNSGGSSLGIAINQSQALALPGACNVQTPPASQCNTVNGPASSPVSPPA 120
           V+S P+CLC VLN GGSSLG+ INQ+QALALP ACNVQTP  S CN V+ PA SP   P 
Sbjct: 61  VRSNPQCLCQVLNGGGSSLGVNINQTQALALPQACNVQTPSVSSCN-VDSPAGSPAGAP- 118

Query: 121 DSSDEMQETPTSPPMPSIPSGSGSKTVPTADGSSSSGSIITM--PLHFTVFILFLASCFS 178
           DSS+             +PSG+GSKTVP+ D  SS GS I M  PL F++    LAS ++
Sbjct: 119 DSSNN------------VPSGTGSKTVPSTDNGSSDGSSIHMSKPLLFSI---LLASIYA 163

Query: 179 SAIKI 183
           SA K+
Sbjct: 164 SAFKL 168

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	183
TAIR|locus:2077001	170	AT3G22600 [Arabidopsis thalian	0.573	0.617	0.490	9.1e-25
TAIR|locus:505006466	156	AT4G14815 [Arabidopsis thalian	0.546	0.641	0.455	3.4e-23
TAIR|locus:2039366	183	AT2G48130 [Arabidopsis thalian	0.912	0.912	0.339	4.9e-21
TAIR|locus:1006230669	171	AT1G03103 "AT1G03103" [Arabido	0.885	0.947	0.335	6.7e-17
TAIR|locus:2164411	182	XYP1 "xylogen protein 1" [Arab	0.540	0.543	0.278	1.8e-09
TAIR|locus:2043750	169	XYP2 "xylogen protein 2" [Arab	0.546	0.591	0.273	9.7e-09
TAIR|locus:2184817	158	AT5G09370 [Arabidopsis thalian	0.524	0.607	0.320	1.2e-08
TAIR|locus:2050482	205	AT2G44290 [Arabidopsis thalian	0.551	0.492	0.296	4.4e-08
TAIR|locus:2138586	208	AT4G08670 [Arabidopsis thalian	0.852	0.75	0.245	2.5e-07
TAIR|locus:2101044	193	LTPG2 "glycosylphosphatidylino	0.431	0.409	0.321	4e-07

TAIR|locus:2077001 AT3G22600 [Arabidopsis thaliana (taxid:3702)]

 Score = 260 (96.6 bits), Expect = 9.1e-25, Sum P(2) = 9.1e-25
 Identities = 53/108 (49%), Positives = 63/108 (58%)

Query:     6 IELCLVLVLVTMLFHGAV---AQSGCTTVLVGLAPCLNYITGNXXXXXXXXXXXXXXXXX 62
             +E+ LV + V M    +    AQS CT  L+ ++PCLNYITGN                 
Sbjct:     3 MEMGLVFLTVFMAVMSSTMVSAQSSCTNALISMSPCLNYITGNSTSPNQQCCNQLSRVVQ 62

Query:    63 XXPRCLCSVLNSGGSSLGIAINQSQALALPGACNVQTPPASQCNTVNG 110
               P CLC VLN GGS LGI +NQ+QAL LP ACNVQTPP S+CNT  G
Sbjct:    63 SSPDCLCQVLNGGGSQLGINVNQTQALGLPRACNVQTPPVSRCNTGGG 110

GO:0005886 "plasma membrane" evidence=ISM

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=IEA;ISS

GO:0031225 "anchored to membrane" evidence=TAS

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

TAIR|locus:505006466 AT4G14815 [Arabidopsis thaliana (taxid:3702)]

 Score = 235 (87.8 bits), Expect = 3.4e-23, Sum P(2) = 3.4e-23
 Identities = 46/101 (45%), Positives = 62/101 (61%)

Query:     8 LCLVLVLVTMLFHGAV-AQSGCTTVLVGLAPCLNYITGNXXXXXXXXXXXXXXXXXXXPR 66
             +CL+L +  M     V AQS CT VL+ +APCL++IT N                     
Sbjct:     5 MCLILFIALMRVMSIVSAQSSCTNVLISMAPCLSFITQNTSLPSQQCCNQLAHVVRYSSE 64

Query:    67 CLCSVLNSGGSSLGIAINQSQALALPGACNVQTPPASQCNT 107
             CLC VL+ GGS LGI +N++QALALP AC+V+TPPAS+C++
Sbjct:    65 CLCQVLDGGGSQLGINVNETQALALPKACHVETPPASRCHS 105

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=IEA;ISS

GO:0031225 "anchored to membrane" evidence=TAS

TAIR|locus:2039366 AT2G48130 [Arabidopsis thaliana (taxid:3702)]

 Score = 247 (92.0 bits), Expect = 4.9e-21, P = 4.9e-21
 Identities = 58/171 (33%), Positives = 81/171 (47%)

Query:    12 LVLVTMLFHGAVAQ--SGCTTVLVGLAPCLNYITGNXXXXXXXXXXXXXXXXXXXPRCLC 69
             + LV  L+    AQ  S C + L  L+PCL+YITGN                   P+C+C
Sbjct:    12 VALVAALWSVTKAQPSSSCVSTLTTLSPCLSYITGNSTTPSQPCCSRLDSVIKSSPQCIC 71

Query:    70 SVLNSGGSSLGIAINQSQALALPGACNVQTPPASQCNTVNGXXXXXXXXXXXXXX-EMQE 128
             S +NS   ++G+ IN++QAL LP ACN+QTPP +QCN   G               ++  
Sbjct:    72 SAVNSPIPNIGLNINRTQALQLPNACNIQTPPLTQCNAATGPTAQPPAPSPTEKTPDVTL 131

Query:   129 XXXXXXXXXXXXXXXXKTVPTADGSSSSGSIITMPLHFTVFILFLASCFSS 179
                             KTVP+    SSS ++  +PLHF +F + L  C SS
Sbjct:   132 TPTSLPGARSGVGGGSKTVPSVGTGSSSRNVDPLPLHFLMFAV-LVVCTSS 181

GO:0005886 "plasma membrane" evidence=ISM

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=IEA;ISS

GO:0031225 "anchored to membrane" evidence=TAS

GO:0000041 "transition metal ion transport" evidence=RCA

GO:0006826 "iron ion transport" evidence=RCA

GO:0010106 "cellular response to iron ion starvation" evidence=RCA

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

TAIR|locus:1006230669 AT1G03103 "AT1G03103" [Arabidopsis thaliana (taxid:3702)]

 Score = 208 (78.3 bits), Expect = 6.7e-17, P = 6.7e-17
 Identities = 56/167 (33%), Positives = 68/167 (40%)

Query:    10 LVLVLVTMLFHGAVA-QSGCTTVLVGLAPCLNYITGNXXXXXXXXXXXXXXXXXXXPRCL 68
             L LV+ T L+ GA   Q+GC   L  L+PCL Y+ G                    P CL
Sbjct:     6 LALVIATFLYGGATTVQAGCRDTLTSLSPCLYYLNGGSSSPSWSCCRQFSTVVQSSPECL 65

Query:    69 CSVLNSGGSSL-GIAINQSQALALPGACNVQTPPASQCNTVNGXXXXXXXXXXXXXXEMQ 127
             CSV+NS  SS  G   N++ AL LP ACNVQTP  S CNT  G                 
Sbjct:    66 CSVVNSNESSFYGFKFNRTLALNLPTACNVQTPSPSLCNT-GGNVPTTLPANTPVGSPRS 124

Query:   128 EXXXXXXXXXXXXXXXXKTVPTADGSSSSGSIITMPLHFTVFILFLA 174
                              K  P ++ SSS  ++I   L F    L LA
Sbjct:   125 APSPSGTTSPANTPSGSKKFPLSNESSSKSNVII--LSFVSIALVLA 169

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0006869 "lipid transport" evidence=IEA

GO:0016020 "membrane" evidence=ISS

TAIR|locus:2164411 XYP1 "xylogen protein 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 109 (43.4 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
 Identities = 29/104 (27%), Positives = 47/104 (45%)

Query:     6 IELCLVLVLVTMLFHG-AVAQS-GCTTVLVGLAPCLNYIT--GNXXXXXXXXXXXXXXXX 61
             + L  V VL     H  A A S  C+T+++ +A CL++++  G                 
Sbjct:    19 LSLSSVSVLGASHHHATAPAPSVDCSTLILNMADCLSFVSSGGTVAKPEGTCCSGLKTVL 78

Query:    62 XXXPRCLCSVLNSGGSSLGIAINQSQALALPGACNVQTPPASQC 105
                 +CLC    S  +SLG+ +N ++A  LP AC +  P  + C
Sbjct:    79 KADSQCLCEAFKSS-ASLGVTLNITKASTLPAACKLHAPSIATC 121

GO:0005886 "plasma membrane" evidence=ISM

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=IEA;ISS

GO:0031225 "anchored to membrane" evidence=TAS

GO:0046658 "anchored to plasma membrane" evidence=IDA

TAIR|locus:2043750 XYP2 "xylogen protein 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 131 (51.2 bits), Expect = 9.7e-09, P = 9.7e-09
 Identities = 29/106 (27%), Positives = 52/106 (49%)

Query:    10 LVLVLVTMLFHGAVAQSG--CTTVLVGLAPCLNYITGNXXXXXXXXX--XXXXXXXXXXP 65
             L++  V  L  G  A +   C+++++ +A CL+++T                       P
Sbjct:     7 LMIFSVVALMSGERAHAAVDCSSLILNMADCLSFVTSGSTVVKPEGTCCSGLKTVVRTGP 66

Query:    66 RCLCSVLNSGGSSLGIAINQSQALALPGACNVQTPPASQCN-TVNG 110
              CLC    + GS LG+ ++ S+A +LP  C V  PP+++C  +V+G
Sbjct:    67 ECLCEAFKNSGS-LGLTLDLSKAASLPSVCKVAAPPSARCGLSVSG 111

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=IEA;ISS

GO:0046658 "anchored to plasma membrane" evidence=IDA

GO:0006084 "acetyl-CoA metabolic process" evidence=RCA

GO:0016126 "sterol biosynthetic process" evidence=RCA

GO:0016132 "brassinosteroid biosynthetic process" evidence=RCA

TAIR|locus:2184817 AT5G09370 [Arabidopsis thaliana (taxid:3702)]

 Score = 130 (50.8 bits), Expect = 1.2e-08, P = 1.2e-08
 Identities = 33/103 (32%), Positives = 49/103 (47%)

Query:     8 LCLVLVLVTMLFHGAVAQSGCTTVLVGLAPCLNYIT--GNXXXXXXXXXXXXXXXXXXXP 65
             L LVL + +   HGA   S C T+++ L PCL +I+  G                    P
Sbjct:    11 LLLVLSVSSPYVHGA---SDCDTLVITLFPCLPFISIGGTADTPTASCCSSLKNILDTKP 67

Query:    66 RCLCSVLNSGGSSLGIAINQSQALALPGACNVQTPPASQCNTV 108
              CLC  L    + LGI +N +++  LP AC +  PP S C+++
Sbjct:    68 ICLCEGLKK--APLGIKLNVTKSATLPVACKLNAPPVSACDSL 108

GO:0005886 "plasma membrane" evidence=ISM

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=IEA;ISS

GO:0031225 "anchored to membrane" evidence=TAS

TAIR|locus:2050482 AT2G44290 [Arabidopsis thaliana (taxid:3702)]

 Score = 125 (49.1 bits), Expect = 4.4e-08, P = 4.4e-08
 Identities = 32/108 (29%), Positives = 47/108 (43%)

Query:     4 KHIELCLVLVLVTMLFHGAVAQSG-----CTTVLVGLAPCLNYITGNXXXXXXXXXXXXX 58
             K +   + L++V M+   A A  G     CT  LVG+A CL Y+ G              
Sbjct:     7 KVMATAIALIMVAMVVDAAGADKGKDKEECTAQLVGMATCLPYVQGKAKSPTPDCCSGLK 66

Query:    59 XXXXXXPRCLCSVLNSGGS-SLGIAINQSQALALPGACNVQTPPASQC 105
                    +CLC ++       LG+ +N S ALALP  C+  T   ++C
Sbjct:    67 QVINSDMKCLCMIIQERNDPDLGLQVNVSLALALPSVCHA-TADITKC 113

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=IEA;ISS

GO:0031225 "anchored to membrane" evidence=TAS

TAIR|locus:2138586 AT4G08670 [Arabidopsis thaliana (taxid:3702)]

 Score = 119 (46.9 bits), Expect = 2.5e-07, P = 2.5e-07
 Identities = 40/163 (24%), Positives = 61/163 (37%)

Query:    24 AQSGCTTVLVGLAPCLNYI-TG-NXXXXXXXXXXXXXXXXXXXPRCLCSVLNSGGSSLGI 81
             + S C+TV+  +  CL Y+  G N                   P+C+C+ L S G  +GI
Sbjct:    44 SSSDCSTVIYSMMDCLGYLGVGSNETKPEKSCCTGIETVLQYNPQCICAGLVSAGE-MGI 102

Query:    82 AINQSQALALPGACNVQ-TPPASQCNTVNGXXXXXXXXXXXXXXEMQEXXXXXXXXXXXX 140
              +N ++ALA P AC +   PP     T                                 
Sbjct:   103 ELNSTRALATPKACKLSIAPPHCGIITSGATTPGASPVSPSAGAPTTSPSAAKSPETSAT 162

Query:   141 XXXXKTVP--TADGSSSSGS-IITMPLHFTVFILFLASCFSSA 180
                    P  TA   SSSG+ I+++P    VF++  +  + SA
Sbjct:   163 SPSSDETPSMTAPSPSSSGTNILSVPALTIVFVIVSSVAYISA 205

GO:0005886 "plasma membrane" evidence=ISM

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=IEA;ISS

GO:0031225 "anchored to membrane" evidence=TAS

GO:0010584 "pollen exine formation" evidence=RCA

TAIR|locus:2101044 LTPG2 "glycosylphosphatidylinositol-anchored lipid protein transfer 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 116 (45.9 bits), Expect = 4.0e-07, P = 4.0e-07
 Identities = 27/84 (32%), Positives = 40/84 (47%)

Query:    28 CTTVLVGLAPCLNYIT----GNXXXXXXXXXXXXXXXXXXXPRCLCSVLNSG-GSSLGIA 82
             C   L+ +  CL+Y+T    G                    P+CLC +L+    + LGI 
Sbjct:    38 CMANLMNMTGCLSYVTVGEGGGAAKPDKTCCPALAGLVESSPQCLCYLLSGDMAAQLGIK 97

Query:    83 INQSQALALPGACNVQTPPASQCN 106
             I++++AL LPG C V TP  S C+
Sbjct:    98 IDKAKALKLPGVCGVITPDPSLCS 121

GO:0005886 "plasma membrane" evidence=ISM

GO:0006869 "lipid transport" evidence=ISS

GO:0008289 "lipid binding" evidence=ISS

GO:0016020 "membrane" evidence=ISS

GO:0031225 "anchored to membrane" evidence=TAS

GO:0000038 "very long-chain fatty acid metabolic process" evidence=RCA

GO:0042335 "cuticle development" evidence=RCA

GO:0042546 "cell wall biogenesis" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	183
cd00010	63	cd00010, AAI_LTSS, AAI_LTSS: Alpha-Amylase Inhibit	2e-21
pfam14368	95	pfam14368, LTP_2, Probable lipid transfer	2e-11
pfam00234	74	pfam00234, Tryp_alpha_amyl, Protease inhibitor/see	2e-11
cd01960	89	cd01960, nsLTP1, nsLTP1: Non-specific lipid-transf	6e-09
smart00499	79	smart00499, AAI, Plant lipid transfer protein / se	2e-08
PRK12438	991	PRK12438, PRK12438, hypothetical protein; Provisio	1e-04
cd04660	73	cd04660, nsLTP_like, nsLTP_like: Non-specific lipi	5e-04

>gnl|CDD|237980 cd00010, AAI_LTSS, AAI_LTSS: Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT) and Seed Storage (SS) Protein family; a protein family unique to higher plants that includes cereal-type alpha-amylase inhibitors, lipid transfer proteins, seed storage proteins, and similar proteins

 Score = 82.5 bits (204), Expect = 2e-21
 Identities = 35/63 (55%), Positives = 46/63 (73%)

Query: 35 LAPCLNYITGNSSTPSSSCCSQLASVVQSQPRCLCSVLNSGGSSLGIAINQSQALALPGA 94
          LAPCL+Y+TG ++ P S CCS L SVV+S P+CLC+ LN  G+SL    N ++ALALP A
Sbjct: 1  LAPCLSYLTGGATAPPSDCCSGLKSVVKSDPKCLCAALNGPGASLLGLKNATRALALPAA 60

Query: 95 CNV 97
          C +
Sbjct: 61 CGL 63

Proteins in this family are known to play important roles, in defending plants from insects and pathogens, lipid transport between intracellular membranes, and nutrient storage. Many proteins of this family have been identified as allergens in humans. These proteins contain a common pattern of eight cysteines that form four disulfide bridges. Length = 63

>gnl|CDD|222713 pfam14368, LTP_2, Probable lipid transfer

 Score = 57.5 bits (139), Expect = 2e-11
 Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 3/97 (3%)

Query: 10  LVLVLVTMLFHGAVAQSGCTTVLVGLAPCLNY-ITGNSSTPSSSCCSQLASVVQSQPRCL 68
           ++ VL+        A +   +    L PCL Y     ++ PS +CC+ L + V++   CL
Sbjct: 1   VLAVLLASAAAAPPAPASAASCADSLLPCLGYCYVNGTAAPSPACCAALKAAVKADVPCL 60

Query: 69  CSVLNSGGSSLGIAINQSQALALPGACNVQTPPASQC 105
           C ++ S  ++ G  IN ++A+ALP AC + T P S+C
Sbjct: 61  CDLVTSPLAA-GFGINLTRAVALPKACGL-TSPPSKC 95

The members of this family are probably involved in lipid transfer. The family has several highly conserved cysteines, paired in various ways. Length = 95

>gnl|CDD|215810 pfam00234, Tryp_alpha_amyl, Protease inhibitor/seed storage/LTP family

 Score = 56.8 bits (137), Expect = 2e-11
 Identities = 31/79 (39%), Positives = 38/79 (48%), Gaps = 6/79 (7%)

Query: 28  CTTVLVGLAPCLNYITGNSSTPSSSCCSQLASVVQSQPRCLCSVLNSGGSSLGIAINQSQ 87
           C  VL+ LAPC  Y+ G    PS  CCSQL  +   Q +C C+ + +    LGI     Q
Sbjct: 1   CGQVLLKLAPCAGYLQGGCQVPSQQCCSQLRQL---QAQCRCTAIRA--IVLGIEGINPQ 55

Query: 88  ALA-LPGACNVQTPPASQC 105
           A A LP  C V  P    C
Sbjct: 56  AAASLPSMCGVNVPYGIDC 74

This family is composed of trypsin-alpha amylase inhibitors, seed storage proteins and lipid transfer proteins from plants. Length = 74

>gnl|CDD|238926 cd01960, nsLTP1, nsLTP1: Non-specific lipid-transfer protein type 1 (nsLTP1) subfamily; Plant nsLTPs are small, soluble proteins that facilitate the transfer of fatty acids, phospholipids, glycolipids, and steroids between membranes

 Score = 50.4 bits (121), Expect = 6e-09
 Identities = 27/82 (32%), Positives = 34/82 (41%), Gaps = 14/82 (17%)

Query: 28  CTTVLVGLAPCLNYITGNSSTPSSSCCS---QLASVVQSQP------RCLCSVLNSGGSS 78
           C  V   LAPCL Y+TG    PS +CCS    L  + ++         CL S        
Sbjct: 3   CGQVTSLLAPCLGYLTGGGPAPSPACCSGVKSLNGLAKTTADRQAACNCLKSAAAGISG- 61

Query: 79  LGIAINQSQALALPGACNVQTP 100
               +N  +A  LPG C V  P
Sbjct: 62  ----LNPGRAAGLPGKCGVSIP 79

In addition to lipid transport and assembly, nsLTPs also play a key role in the defense of plants against pathogens. There are two closely-related types of nsLTPs, types 1 and 2, which differ in protein sequence, molecular weight, and biological properties. nsLTPs contain an internal hydrophobic cavity, which serves as the binding site for lipids. The hydrophobic cavity accommodates various fatty acid ligands containing from ten to 18 carbon atoms. In general, the cavity is larger in nsLTP1 than in nsLTP2. nsLTP1 proteins are located in extracellular layers and in vacuolar structures. They may be involved in the formation of cutin layers on plant surfaces by transporting cutin monomers. Many nsLTP1 proteins have been characterized as allergens in humans. Length = 89

>gnl|CDD|214698 smart00499, AAI, Plant lipid transfer protein / seed storage protein / trypsin-alpha amylase inhibitor domain family

 Score = 49.3 bits (117), Expect = 2e-08
 Identities = 30/76 (39%), Positives = 38/76 (50%), Gaps = 2/76 (2%)

Query: 28  CTTVLVGLAPCLNYITG--NSSTPSSSCCSQLASVVQSQPRCLCSVLNSGGSSLGIAINQ 85
           C  VL+ LAPCL+Y+ G    + PS  CCSQL  +  +Q RCL       G      +N 
Sbjct: 1   CGQVLLQLAPCLSYLVGGSRGAPPSQQCCSQLRGLNSAQCRCLALRAAVLGILEIPGLNA 60

Query: 86  SQALALPGACNVQTPP 101
             A +LP AC V  P 
Sbjct: 61  QNAASLPSACGVPPPY 76

Length = 79

>gnl|CDD|171499 PRK12438, PRK12438, hypothetical protein; Provisional

 Score = 41.8 bits (98), Expect = 1e-04
 Identities = 31/111 (27%), Positives = 44/111 (39%), Gaps = 15/111 (13%)

Query: 46  SSTPSSSCCSQLASVVQS--QPRCLCSVLNSGGSSLGIAINQSQALA---LPGACNVQTP 100
           S++PSSS   QL+ V+ S  +PR        GG  +G A   ++AL     PG   V T 
Sbjct: 852 STSPSSSTFPQLSRVLVSVREPR------TEGGVRVGYAPTLAEALDQVFGPGTGRVATA 905

Query: 101 PASQCNTVNGPASSPVSPPADSSDEMQETPTSPPMPSIPSGSGSKTVPTAD 151
           P     +   P + P +PP          P + P    P G        A+
Sbjct: 906 PGGDAASAPPPGAGPPAPPQAVPPPRTTQPPAAP----PRGPDVPPAAVAE 952

Length = 991

>gnl|CDD|240018 cd04660, nsLTP_like, nsLTP_like: Non-specific lipid-transfer protein (nsLTP)-like subfamily; composed of predominantly uncharacterized proteins with similarity to nsLTPs, including Medicago truncatula MtN5, the root-specific Phaseolus vulgaris PVR3, Antirrhinum majus FIL1, and Lilium longiflorum LIM3

 Score = 37.0 bits (86), Expect = 5e-04
 Identities = 23/73 (31%), Positives = 33/73 (45%), Gaps = 10/73 (13%)

Query: 34  GLAPCLNYITGNSS--TPSSSCCSQLASV-VQSQPRCLCSVLNSGGSSLGIAINQSQALA 90
            LA C  Y+TG +    PS  CC+ L    +     CLC    S    +   I+  +A+ 
Sbjct: 7   LLAECQPYVTGPNPPPPPSRECCAALRRADLP----CLCRYKTSLVLQI---IDPDKAVY 59

Query: 91  LPGACNVQTPPAS 103
           LP  C +  PP+S
Sbjct: 60  LPAKCGLPLPPSS 72

Plant nsLTPs are small, soluble proteins that facilitate the transfer of fatty acids, phospholipids, glycolipids, and steroids between membranes. The MtN5 gene is induced during root nodule development. FIL1 is thought to be important in petal and stamen formation. The LIM3 gene is induced during the early prophase stage of meiosis in lily microsporocytes. Length = 73

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	183
cd01960	89	nsLTP1 nsLTP1: Non-specific lipid-transfer protein	99.59
cd04660	73	nsLTP_like nsLTP_like: Non-specific lipid-transfer	99.54
PF14368	96	LTP_2: Probable lipid transfer; PDB: 2RKN_A 1N89_A	99.54
cd00010	63	AAI_LTSS AAI_LTSS: Alpha-Amylase Inhibitors (AAI),	99.49
cd01959	66	nsLTP2 nsLTP2: Non-specific lipid-transfer protein	99.34
smart00499	79	AAI Plant lipid transfer protein / seed storage pr	99.07
PF00234	90	Tryp_alpha_amyl: Protease inhibitor/seed storage/L	98.71
PF14547	85	Hydrophob_seed: Hydrophobic seed protein	96.51
cd01958	85	HPS_like HPS_like: Hydrophobic Protein from Soybea	95.77
cd00261	110	AAI_SS AAI_SS: Alpha-Amylase Inhibitors (AAIs) and	86.63
PF07172	95	GRP: Glycine rich protein family; InterPro: IPR010	83.19

>cd01960 nsLTP1 nsLTP1: Non-specific lipid-transfer protein type 1 (nsLTP1) subfamily; Plant nsLTPs are small, soluble proteins that facilitate the transfer of fatty acids, phospholipids, glycolipids, and steroids between membranes

Probab=99.59  E-value=8.6e-16  Score=111.37  Aligned_cols=74  Identities=36%  Similarity=0.763  Sum_probs=62.2

Q ss_pred             CCChhhccCcccchhhhhCCCCCCChhHHHHHHhhhcC-----CCcccceeccCCCCCCCcccChHHhhhccCCcccCCC
Q 030070           26 SGCTTVLVGLAPCLNYITGNSSTPSSSCCSQLASVVQS-----QPRCLCSVLNSGGSSLGIAINQSQALALPGACNVQTP  100 (183)
Q Consensus        26 ~~C~~v~~~L~pCl~yv~g~~~~Ps~~CC~~l~~v~~s-----~~~CLC~~l~~~~~~~g~~in~trA~~LP~~Cgv~~P  100 (183)
                      .+|.++...|.||++|+++++..|++.||++++++++.     +.+|+|.++++....+. .||.+|+++||++||++++
T Consensus         1 ~~C~~v~~~l~~C~~y~~g~~~~Ps~~CC~~v~~l~~~~~t~~~~~~~C~C~~~~~~~~~-~i~~~~a~~LP~~C~v~~~   79 (89)
T cd01960           1 ISCGQVTSLLAPCLGYLTGGGPAPSPACCSGVKSLNGLAKTTADRQAACNCLKSAAAGIS-GLNPGRAAGLPGKCGVSIP   79 (89)
T ss_pred             CCHHHHHhhHHhHHHHHhCCCCCCChHHhhhhHHHhhccCCCCchhhhhhcccccccccC-CCCHHHHHhChHhcccCCC
Confidence            36999999999999999998778999999999998753     45788887877554442 3899999999999999986

In addition to lipid transport and assembly, nsLTPs also play a key role in the defense of plants against pathogens. There are two closely-related types of nsLTPs, types 1 and 2, which differ in protein sequence, molecular weight, and biological properties. nsLTPs contain an internal hydrophobic cavity, which serves as the binding site for lipids. The hydrophobic cavity accommodates various fatty acid ligands containing from ten to 18 carbon atoms. In general, the cavity is larger in nsLTP1 than in nsLTP2. nsLTP1 proteins are located in extracellular layers and in vacuolar structures. They may be involved in the formation of cutin layers on plant surfaces by transporting cutin monomers. Many nsLTP1 proteins have been characterized as allergens in humans.

>cd04660 nsLTP_like nsLTP_like: Non-specific lipid-transfer protein (nsLTP)-like subfamily; composed of predominantly uncharacterized proteins with similarity to nsLTPs, including Medicago truncatula MtN5, the root-specific Phaseolus vulgaris PVR3, Antirrhinum majus FIL1, and Lilium longiflorum LIM3

Probab=99.54  E-value=2.9e-15  Score=105.30  Aligned_cols=71  Identities=38%  Similarity=0.758  Sum_probs=59.2

Q ss_pred             ChhhccCcccchhhhhCCC--CCCChhHHHHHHhhhcCCCcccceeccCCCCCCCcccChHHhhhccCCcccCCCCCCCC
Q 030070           28 CTTVLVGLAPCLNYITGNS--STPSSSCCSQLASVVQSQPRCLCSVLNSGGSSLGIAINQSQALALPGACNVQTPPASQC  105 (183)
Q Consensus        28 C~~v~~~L~pCl~yv~g~~--~~Ps~~CC~~l~~v~~s~~~CLC~~l~~~~~~~g~~in~trA~~LP~~Cgv~~Pp~s~C  105 (183)
                      |...+..|.+|++||++++  ..|+..||++++++   +.+|+|.+++..  .+. .||.+||.+||++|||++|+ ++|
T Consensus         1 C~~~~~~L~~C~~yl~~~~~~~~Ps~~CC~~vk~~---~~~C~C~~~~~~--~~~-~i~~~~a~~Lp~~Cgv~~p~-~~C   73 (73)
T cd04660           1 CNMDLDLLAECQPYVTGPNPPPPPSRECCAALRRA---DLPCLCRYKTSL--VLQ-IIDPDKAVYLPAKCGLPLPP-SSC   73 (73)
T ss_pred             CCCCHHHHHHHHHHHcCCCCCCCCCHHHHHHHHcC---CcCCEeeccCCC--ccc-ccCHHHHHHHHHHcCCCCCC-CCC
Confidence            5566678999999999876  46999999999986   667999887753  333 48999999999999999998 887

Plant nsLTPs are small, soluble proteins that facilitate the transfer of fatty acids, phospholipids, glycolipids, and steroids between membranes. The MtN5 gene is induced during root nodule development. FIL1 is thought to be important in petal and stamen formation. The LIM3 gene is induced during the early prophase stage of meiosis in lily microsporocytes.

>PF14368 LTP_2: Probable lipid transfer; PDB: 2RKN_A 1N89_A 1TUK_A

Probab=99.54  E-value=5.5e-16  Score=112.31  Aligned_cols=76  Identities=54%  Similarity=1.076  Sum_probs=49.0

Q ss_pred             ccCCChhhccCcccc---hhhhhCCCCCCChhHHHHHHhhhcCCCcccceeccCCCCCCCcccChHHhhhccCCcccCCC
Q 030070           24 AQSGCTTVLVGLAPC---LNYITGNSSTPSSSCCSQLASVVQSQPRCLCSVLNSGGSSLGIAINQSQALALPGACNVQTP  100 (183)
Q Consensus        24 A~~~C~~v~~~L~pC---l~yv~g~~~~Ps~~CC~~l~~v~~s~~~CLC~~l~~~~~~~g~~in~trA~~LP~~Cgv~~P  100 (183)
                      ...+|.+.   |.+|   +.|+.++ ..|+..||++++++++.+..|||+++++.. ..+++||.+|++.||++||++.+
T Consensus        18 ~~~~c~~~---l~~c~~~~~~~~~~-~~Ps~~CC~~l~~~~~~~~~ClC~~~~~~~-~~~~~in~~~a~~Lp~~Cg~~~~   92 (96)
T PF14368_consen   18 CCCSCANS---LLPCCPCLCYVTGG-PAPSAACCSALKSVVQADPPCLCQLLNSPG-APGFGINVTRALALPAACGVPVP   92 (96)
T ss_dssp             BTTB-HCC---CCHH--HHHHHCC------HHHHHHHCC----HCCHHHCCCC-CC-HCHHCCTCHHHHHHHHHCTSS-S
T ss_pred             CcchhHHH---HhccccchhccCCC-CCCCHHHHHHHHHhccCCCCCHHHhcCccc-cccCCcCHHHHHHHHHHcCCCCC
Confidence            34567544   6665   8888854 589999999999998889999999998864 23456999999999999999998


Q ss_pred             CCCCC
Q 030070          101 PASQC  105 (183)
Q Consensus       101 p~s~C  105 (183)
                      + ++|
T Consensus        93 ~-~~C   96 (96)
T PF14368_consen   93 P-SKC   96 (96)
T ss_dssp             -----
T ss_pred             C-CCC
Confidence            8 777

>cd00010 AAI_LTSS AAI_LTSS: Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT) and Seed Storage (SS) Protein family; a protein family unique to higher plants that includes cereal-type alpha-amylase inhibitors, lipid transfer proteins, seed storage proteins, and similar proteins

Probab=99.49  E-value=1.6e-14  Score=97.95  Aligned_cols=63  Identities=56%  Similarity=1.037  Sum_probs=53.8

Q ss_pred             cccchhhhhCCCCCCChhHHHHHHhhhcCCCcccceeccCCCCCCCcccChHHhhhccCCccc
Q 030070           35 LAPCLNYITGNSSTPSSSCCSQLASVVQSQPRCLCSVLNSGGSSLGIAINQSQALALPGACNV   97 (183)
Q Consensus        35 L~pCl~yv~g~~~~Ps~~CC~~l~~v~~s~~~CLC~~l~~~~~~~g~~in~trA~~LP~~Cgv   97 (183)
                      |.||++|+++++..|+..||++++++.+.++.|+|+++++........+|.+++++||++|||
T Consensus         1 L~~C~~y~~~~~~~Ps~~CC~~l~~~~~~~~~ClC~~~~~~~~~~~~~~~~~~a~~LP~~Cgv   63 (63)
T cd00010           1 LAPCLSYLTGGATAPPSDCCSGLKSVVKSDPKCLCAALNGPGASLLGLKNATRALALPAACGL   63 (63)
T ss_pred             CcchHHHHcCCCCCCChHHHHHHHHHHhcChhhHHHHHcCccccccCcccHHHHHhchHhcCC
Confidence            679999999887789999999999999889999999999865433212379999999999996

Proteins in this family are known to play important roles, in defending plants from insects and pathogens, lipid transport between intracellular membranes, and nutrient storage. Many proteins of this family have been identified as allergens in humans. These proteins contain a common pattern of eight cysteines that form four disulfide bridges.

>cd01959 nsLTP2 nsLTP2: Non-specific lipid-transfer protein type 2 (nsLTP2) subfamily; Plant nsLTPs are small, soluble proteins that facilitate the transfer of fatty acids, phospholipids, glycolipids, and steroids between membranes

Probab=99.34  E-value=6.5e-13  Score=92.16  Aligned_cols=61  Identities=38%  Similarity=0.739  Sum_probs=52.4

Q ss_pred             cCcccchhhhhCCCCCCChhHHHHHHhhhcCCCcccceeccCCCCCCCcccChHHhhhccCCcccCCC
Q 030070           33 VGLAPCLNYITGNSSTPSSSCCSQLASVVQSQPRCLCSVLNSGGSSLGIAINQSQALALPGACNVQTP  100 (183)
Q Consensus        33 ~~L~pCl~yv~g~~~~Ps~~CC~~l~~v~~s~~~CLC~~l~~~~~~~g~~in~trA~~LP~~Cgv~~P  100 (183)
                      .+|.+|++|++++ ..|+..||+.|++    +..|||++++++.  ++..||.++|++|+++|||++|
T Consensus         4 ~~L~~C~~ai~~~-~~Ps~~CC~~Lk~----~~~CLC~y~~~p~--l~~~i~~~~A~~l~~~Cgv~~P   64 (66)
T cd01959           4 TQLSPCLPAILGG-SPPSAACCAKLKE----QQSCLCQYAKNPS--LKQYVNSPNARKVLAACGVPYP   64 (66)
T ss_pred             hhcccCHHHHhCC-CCCCHHHHHHHhc----CCCCeeeeecCcc--HHhhcCcHHHHHHHHHcCCCCC
Confidence            4799999999976 4899999999998    4589999998753  3335899999999999999885

In addition to lipid transport and assembly, nsLTPs also play a key role in the defense of plants against pathogens. There are two closely-related types of nsLTPs, types 1 and 2, which differ in protein sequence, molecular weight, and biological properties. nsLTPs contain an internal hydrophobic cavity, which serves as the binding site for lipids. nsLTP2 can bind lipids and sterols. Structure studies of rice nsLTPs show that the plasticity of the hydrophobic cavity is an important factor in ligand binding. The flexibility of the sLTP2 cavity allows its binding to rigid sterol molecules, whereas nsLTP1 cannot bind sterols despite its larger cavity size. The resulting nsLTP2/sterol complexes may bind to receptors that trigger defense responses. nsLTP2 gene exp

>smart00499 AAI Plant lipid transfer protein / seed storage protein / trypsin-alpha amylase inhibitor domain family

Probab=99.07  E-value=1.5e-10  Score=79.53  Aligned_cols=75  Identities=40%  Similarity=0.835  Sum_probs=59.1

Q ss_pred             ChhhccCcccchhhhhCC--CCCCChhHHHHHHhhhcCCCcccceeccCCCCCCCc--ccChHHhhhccCCcccCCCCCC
Q 030070           28 CTTVLVGLAPCLNYITGN--SSTPSSSCCSQLASVVQSQPRCLCSVLNSGGSSLGI--AINQSQALALPGACNVQTPPAS  103 (183)
Q Consensus        28 C~~v~~~L~pCl~yv~g~--~~~Ps~~CC~~l~~v~~s~~~CLC~~l~~~~~~~g~--~in~trA~~LP~~Cgv~~Pp~s  103 (183)
                      |...+..+.+|++|+++.  ...|+..||++|+.+.  +..|+|.+++.....+..  .+|..++..||+.||+..++ +
T Consensus         1 C~~~~~~~~~c~~~~~~~~~~~~p~~~CC~~l~~~~--~~~C~C~~~~~~~~~~~~~~~~~~~~a~~lp~~C~~~~~~-~   77 (79)
T smart00499        1 CGQVLLQLAPCLSYLTGGSPGAPPSQQCCSQLRGLN--SAQCRCLALRAAVLGILEIPGVNAQNAASLPSACGVPPPY-T   77 (79)
T ss_pred             ChhhhhhHHhhHHHHcCCCCCCCCchHHHHHHHHhc--ccCCcchhhhcccccccchhhhhHHHHHhhHHhcCCCCCC-C
Confidence            666777788999999986  4578999999999986  788999988765332211  25899999999999998764 4


Q ss_pred             CC
Q 030070          104 QC  105 (183)
Q Consensus       104 ~C  105 (183)
                      .|
T Consensus        78 ~C   79 (79)
T smart00499       78 DC   79 (79)
T ss_pred             CC
Confidence            54

>PF00234 Tryp_alpha_amyl: Protease inhibitor/seed storage/LTP family This is a small subfamily; InterPro: IPR003612 This domain is found is several proteins, including plant lipid transfer proteins [], seed storage proteins [] and trypsin-alpha amylase inhibitors [, ]

Probab=98.71  E-value=1.4e-10  Score=83.39  Aligned_cols=74  Identities=36%  Similarity=0.844  Sum_probs=57.7

Q ss_pred             ChhhccCcccchhhhhCCCCCCChhHHHHHHhhhcCCCcccceeccCCCCCC---------CcccChHHhhhccCCcccC
Q 030070           28 CTTVLVGLAPCLNYITGNSSTPSSSCCSQLASVVQSQPRCLCSVLNSGGSSL---------GIAINQSQALALPGACNVQ   98 (183)
Q Consensus        28 C~~v~~~L~pCl~yv~g~~~~Ps~~CC~~l~~v~~s~~~CLC~~l~~~~~~~---------g~~in~trA~~LP~~Cgv~   98 (183)
                      |..+...+.+|+.|++++...|+..||++|+++   +..|.|..++......         ...++..+|..||+.|||.
T Consensus         8 ~~~~~~~l~~c~~~~~~~~~~~~~~CC~~L~~l---~~~C~C~~i~~~~~~~~~q~~~~~~~~~~~~~~a~~LP~~C~v~   84 (90)
T PF00234_consen    8 CSPVQVRLSPCLPYLQGGCQQPSQQCCQQLRQL---DPQCRCEAIRQMVRQVIQQQQQGGQEMQIMAQRAQNLPSMCNVS   84 (90)
T ss_dssp             CGTTSSHHHGGHHHHTTSSSHHHHHHHHHHHHH---HHHHHHHHHHHHHHHSHHCTSTCSHHHHHHHHHHHHHHHHTTSS
T ss_pred             hhhccccccccHHHHhcccccchHHHhHHHHHH---hHHhhCHHHHHHHHhhhhhhhhhHHHHHHHHHHHHHHHHHCCCC
Confidence            333334589999999987667999999999999   8899999887643321         1258899999999999999


Q ss_pred             CCCCCCC
Q 030070           99 TPPASQC  105 (183)
Q Consensus        99 ~Pp~s~C  105 (183)
                      +++ .+|
T Consensus        85 ~~~-~~C   90 (90)
T PF00234_consen   85 PPY-TDC   90 (90)
T ss_dssp             SSS-S-G
T ss_pred             CCC-CCC
Confidence            875 344

The domain forms a four-helical bundle in a right-handed superhelix with a folded leaf topology, which is stabilised by disulphide bonds, and which has an internal cavity. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; PDB: 1BFA_A 1BEA_A 1MID_A 1BE2_A 1LIP_A 3GSH_A 1JTB_A 1UVC_B 1BV2_A 1UVB_A ....

>PF14547 Hydrophob_seed: Hydrophobic seed protein

Probab=96.51  E-value=0.00073  Score=49.14  Aligned_cols=77  Identities=30%  Similarity=0.628  Sum_probs=53.7

Q ss_pred             ChhhccCcccchhhhh----CCCCCCChhHHHHHHhhhcCC-CcccceeccCCCCCCC-cccChHHhh-hccCCcccCCC
Q 030070           28 CTTVLVGLAPCLNYIT----GNSSTPSSSCCSQLASVVQSQ-PRCLCSVLNSGGSSLG-IAINQSQAL-ALPGACNVQTP  100 (183)
Q Consensus        28 C~~v~~~L~pCl~yv~----g~~~~Ps~~CC~~l~~v~~s~-~~CLC~~l~~~~~~~g-~~in~trA~-~LP~~Cgv~~P  100 (183)
                      |.-....|.-|.+.+.    ..+..+...||.-++++...+ ..|||..++..  .+| +++|....+ .|-+.||-..|
T Consensus         2 CP~d~lkLgvC~~vL~l~~~~~g~~~~~~CC~li~gL~d~~AA~CLC~aika~--vlg~i~~~ipv~l~~lln~CGk~~p   79 (85)
T PF14547_consen    2 CPRDALKLGVCANVLGLVNLVIGNPPRQPCCSLIAGLADLDAAVCLCTAIKAN--VLGLINVNIPVALNLLLNACGKTVP   79 (85)
T ss_pred             CCCcchhhhhhhhhhhhhccccCCCCCCCcChHHhCcccchHHHHHHHHHhhh--cccccccccccHHHHHHHHhCCcCc
Confidence            5444457788888871    112357889999999987655 49999888764  344 444444444 45688999998


Q ss_pred             CCCCCC
Q 030070          101 PASQCN  106 (183)
Q Consensus       101 p~s~C~  106 (183)
                      +.++|.
T Consensus        80 ~gf~C~   85 (85)
T PF14547_consen   80 SGFTCP   85 (85)
T ss_pred             CCCcCC
Confidence            888884

>cd01958 HPS_like HPS_like: Hydrophobic Protein from Soybean (HPS)-like subfamily; composed of proteins with similarity to HPS, a small hydrophobic protein with unknown function related to cereal-type alpha-amylase inhibitors and lipid transfer proteins

Probab=95.77  E-value=0.0067  Score=44.16  Aligned_cols=77  Identities=27%  Similarity=0.633  Sum_probs=53.6

Q ss_pred             CChhhccCcccchhhhhCC----CCCCChhHHHHHHhhhcCC-CcccceeccCCCCCCCcccChHHhhhc-cCCcccCCC
Q 030070           27 GCTTVLVGLAPCLNYITGN----SSTPSSSCCSQLASVVQSQ-PRCLCSVLNSGGSSLGIAINQSQALAL-PGACNVQTP  100 (183)
Q Consensus        27 ~C~~v~~~L~pCl~yv~g~----~~~Ps~~CC~~l~~v~~s~-~~CLC~~l~~~~~~~g~~in~trA~~L-P~~Cgv~~P  100 (183)
                      .|.-....|.-|.+-+..-    +..|..+||.-++++..-+ ..|+|..++..  .+|+++|..-.+.+ -+.||-..|
T Consensus         3 ~CP~dalkLgvCanvL~l~~~~~g~~~~~~CC~ll~GL~dldAA~CLCtaikan--~lgi~~~~pv~l~llln~CGk~~P   80 (85)
T cd01958           3 TCPRDALKLGVCANVLGLSLLLLGTPAVQPCCPLIGGLADLDAAVCLCTAIKAN--ILGISINIPVALSLLLNSCGRNVP   80 (85)
T ss_pred             CCCcchHHhchhHhhhhccccccCCCccchHHHHHcCchhhheeeeeeeeeecc--ccCcccccChhHHHHHHHHcCcCC
Confidence            3544445677777766321    2467799999999987654 59999988863  45655655555544 578999999


Q ss_pred             CCCCC
Q 030070          101 PASQC  105 (183)
Q Consensus       101 p~s~C  105 (183)
                      +.++|
T Consensus        81 ~gf~C   85 (85)
T cd01958          81 PGFTC   85 (85)
T ss_pred             CCCcC
Confidence            88887

In addition to HPS, members of this subfamily include a hybrid proline-rich protein (HyPRP) from maize, a dark-inducible protein (LeDI-2) from Lithospermum erythrorhizon, maize ZRP3 protein, and rice RcC3 protein. HyPRP is an embryo-specific protein that contains an N-terminal proline-rich domain and a C-terminal HPS-like cysteine-rich domain. It has been suggested that HyPRP may be involved in the stability and defense of the developing embryo. LeDI-2 is a root-specific protein that may be involved in regulating the biosynthesis of shikonin derivatives in L. erythrorhizon. Maize ZRP3 and rice RcC3 are root-specific proteins whose functions are yet to be determined. It has been reported that ZRP3 largely accumulates in a distinct subset

>cd00261 AAI_SS AAI_SS: Alpha-Amylase Inhibitors (AAIs) and Seed Storage (SS) Protein subfamily; composed of cereal-type AAIs and SS proteins

Probab=86.63  E-value=0.15  Score=37.68  Aligned_cols=69  Identities=26%  Similarity=0.583  Sum_probs=44.7

Q ss_pred             cCcccchhhhhCCC---C-----------CCChhHHHHHHhhhcCCCcccceeccCCCCCC----C----------cccC
Q 030070           33 VGLAPCLNYITGNS---S-----------TPSSSCCSQLASVVQSQPRCLCSVLNSGGSSL----G----------IAIN   84 (183)
Q Consensus        33 ~~L~pCl~yv~g~~---~-----------~Ps~~CC~~l~~v~~s~~~CLC~~l~~~~~~~----g----------~~in   84 (183)
                      ..|.+|..||.-..   .           .....||..|+.+   ...|.|..|......+    +          ...-
T Consensus        13 ~~L~~C~~yl~qq~~~~~~~~~~~~~~~~~~~qqCCqqL~~i---~~qcrC~al~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (110)
T cd00261          13 QPLNSCREYLRQQCSGVGGPPVWPQQSCEVLRQQCCQQLAQI---PEQCRCEALRQMVQGVIQQQQQQQEQQQGQEVERM   89 (110)
T ss_pred             ccCcHHHHHHHHhccCCCCCCCcCccccHHHHHHHHHHHHhC---cHhhhHHHHHHHHHHHHHhhhccccccCcChHHHH
Confidence            35889999986321   1           1236699999998   7889998775321110    0          1123


Q ss_pred             hHHhhhccCCcccCCCCCCCCC
Q 030070           85 QSQALALPGACNVQTPPASQCN  106 (183)
Q Consensus        85 ~trA~~LP~~Cgv~~Pp~s~C~  106 (183)
                      ...|..||..||+..+  ..|.
T Consensus        90 ~~~a~~Lp~~C~~~~~--~~C~  109 (110)
T cd00261          90 RQAAQNLPSMCNLYPP--PYCP  109 (110)
T ss_pred             HHHHHhhchhcCCCCC--CCCC
Confidence            4578899999999862  3564

They are mainly present in the seeds of a variety of plants. AAIs play an important role in the natural defenses of plants against insects and pathogens such as fungi, bacteria and viruses. AAIs impede the digestion of plant starch and proteins by inhibiting digestive alpha-amylases and proteinases. Also included in this subfamily are SS proteins such as 2S albumin, gamma-gliadin, napin, and prolamin. These AAIs and SS proteins are also known allergens in humans.

>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins

Probab=83.19  E-value=1  Score=33.30  Aligned_cols=12  Identities=42%  Similarity=0.324  Sum_probs=7.2

Q ss_pred             CcchhhHHHHHH
Q 030070            1 MAPKHIELCLVL   12 (183)
Q Consensus         1 Ma~~~~~~~~v~   12 (183)
                      |++|+++++.++
T Consensus         1 MaSK~~llL~l~   12 (95)
T PF07172_consen    1 MASKAFLLLGLL   12 (95)
T ss_pred             CchhHHHHHHHH
Confidence            997765544333

Some of them may be involved in resistance to environmental stress [].

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	183
1afh_A	93	Maize nonspecific lipid transfer protein; lipid-bi	7e-16
2alg_A	92	Non-specific lipid transfer protein; LTP, NS-LTP,	8e-13
1siy_A	91	LTP 1, NS-LTP1, nonspecific lipid-transfer protein	3e-12
1bwo_A	90	NS-LTP1, nonspecific lipid-transfer protein; wheat	4e-12
1t12_A	91	LTP 1, nonspecific lipid-transfer protein 1; cyste	5e-11
2rkn_A	77	DIR1 protein, AT5G48485; LTP, defense signaling pr	1e-05

>1afh_A Maize nonspecific lipid transfer protein; lipid-binding protein, molecular modeling,; NMR {Zea mays} SCOP: a.52.1.1 PDB: 1fk0_A* 1fk1_A* 1fk2_A* 1fk3_A* 1fk4_A* 1fk5_A* 1fk6_A* 1fk7_A* 1mzl_A 1mzm_A* 1bv2_A 1rzl_A* 1uva_A* 1uvb_A* 1uvc_A* Length = 93

 Score = 68.3 bits (167), Expect = 7e-16
 Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 10/91 (10%)

Query: 28  CTTVLVGLAPCLNYITGNSSTPSSSCCS---QLASVVQSQP--RCLCSVLNSGGSSLGIA 82
           C  V   +APC++Y  G  S PS+ CCS    L +  ++    R  C+ L +  + +   
Sbjct: 4   CGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVS-G 62

Query: 83  INQSQALALPGACNVQTP----PASQCNTVN 109
           +N   A ++P  C V  P     ++ C+ VN
Sbjct: 63  LNAGNAASIPSKCGVSIPYTISTSTDCSRVN 93

>2alg_A Non-specific lipid transfer protein; LTP, NS-LTP, FOOD allergen, lipid transport; HET: DAO P6G; 2.30A {Prunus persica} PDB: 2b5s_A* Length = 92

 Score = 60.2 bits (146), Expect = 8e-13
 Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 9/89 (10%)

Query: 28  CTTVLVGLAPCLNYITGNSSTPSSSCCS--QLASVVQSQP--RCLCSVLNSGGSSLGIAI 83
           C  V   LAPC+ Y+ G  + P + C     + ++ ++ P  +  C+ L    +S+   +
Sbjct: 4   CGQVSSSLAPCIPYVRGGGAVPPACCNGIRNVNNLARTTPDRQAACNCLKQLSASVP-GV 62

Query: 84  NQSQALALPGACNVQTP----PASQCNTV 108
           N + A ALPG C V  P     ++ C TV
Sbjct: 63  NPNNAAALPGKCGVSIPYKISASTNCATV 91

>1siy_A LTP 1, NS-LTP1, nonspecific lipid-transfer protein 1; alpha helix, lipid binding protein; NMR {Vigna radiata var} Length = 91

 Score = 59.1 bits (143), Expect = 3e-12
 Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 9/90 (10%)

Query: 28  CTTVLVGLAPCLNYITGNSSTPSSSCCS--QLASVVQSQP--RCLCSVLNSGGSSLGIAI 83
           C  V   LA C+ ++      P S C     + +  ++    R +CS L +   ++   I
Sbjct: 3   CGQVQGNLAQCIGFLQKGGVVPPSCCTGVKNILNSSRTTADRRAVCSCLKAAAGAVR-GI 61

Query: 84  NQSQALALPGACNVQTP----PASQCNTVN 109
           N + A ALPG C V  P     ++ CN++N
Sbjct: 62  NPNNAEALPGKCGVNIPYKISTSTNCNSIN 91

>1bwo_A NS-LTP1, nonspecific lipid-transfer protein; wheat, lipid binding, crystallography; HET: LPC; 2.10A {Triticum aestivum} SCOP: a.52.1.1 PDB: 1cz2_A* 1gh1_A 1be2_A* 1jtb_A* 1lip_A 1mid_A* 3cee_A* 3gsh_A* Length = 90

 Score = 58.7 bits (142), Expect = 4e-12
 Identities = 21/89 (23%), Positives = 34/89 (38%), Gaps = 9/89 (10%)

Query: 28  CTTVLVGLAPCLNYITGNSSTPSSSCCS--QLASVVQSQP--RCLCSVLNSGGSSLGIAI 83
           C  V   + PCL+Y+ G        C     L +  +SQ   +  C+ L      +   +
Sbjct: 3   CGHVDSLVRPCLSYVQGGPGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIH-NL 61

Query: 84  NQSQALALPGACNVQTP----PASQCNTV 108
           N+  A ++P  C V  P        C+ V
Sbjct: 62  NEDNARSIPPKCGVNLPYTISLNIDCSRV 90

>1t12_A LTP 1, nonspecific lipid-transfer protein 1; cystein rich protein, lipid transport; NMR {Nicotiana tabacum} Length = 91

 Score = 55.6 bits (134), Expect = 5e-11
 Identities = 26/90 (28%), Positives = 38/90 (42%), Gaps = 12/90 (13%)

Query: 28  CTTVLVGLAPCLNYITGNSSTPSSSCCS---QLASVVQSQP--RCLCSVLNSGGSSLGIA 82
           C  V   LAPCL Y+      P   CC     L +  ++    +  C+ L S   ++   
Sbjct: 4   CGQVTSNLAPCLAYLRNTG--PLGRCCGGVKALVNSARTTEDRQIACTCLKSAAGAIS-G 60

Query: 83  INQSQALALPGACNVQTP----PASQCNTV 108
           IN  +A  LP  C V  P    P++ C+ V
Sbjct: 61  INLGKAAGLPSTCGVNIPYKISPSTDCSKV 90

>2rkn_A DIR1 protein, AT5G48485; LTP, defense signaling protein, signaling protein, lipid TRA; HET: LP3; 1.60A {Arabidopsis thaliana} Length = 77

 Score = 40.8 bits (95), Expect = 1e-05
 Identities = 21/79 (26%), Positives = 29/79 (36%), Gaps = 5/79 (6%)

Query: 24  AQSGCTTVLVGLAPCLNYITGNSST-PSSSCCSQLASVVQSQPRCLCSVLNSGGSSLGIA 82
           A   C      L  C   ++  + T PS  CC+ L     +   CLC   NS        
Sbjct: 1   AIDLCGMSQDELNECKPAVSKENPTSPSQPCCTALQH---ADFACLCGYKNSPWLGS-FG 56

Query: 83  INQSQALALPGACNVQTPP 101
           ++   A ALP  C +   P
Sbjct: 57  VDPELASALPKQCGLANAP 75

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	183
2ljo_A	93	Non-specific lipid-transfer protein 2; lipid trans	99.7
1afh_A	93	Maize nonspecific lipid transfer protein; lipid-bi	99.66
1bwo_A	90	NS-LTP1, nonspecific lipid-transfer protein; wheat	99.64
1siy_A	91	LTP 1, NS-LTP1, nonspecific lipid-transfer protein	99.64
1t12_A	91	LTP 1, nonspecific lipid-transfer protein 1; cyste	99.63
2alg_A	92	Non-specific lipid transfer protein; LTP, NS-LTP,	99.62
2rkn_A	77	DIR1 protein, AT5G48485; LTP, defense signaling pr	99.55
1l6h_A	69	LTP2, non-specific lipid transfer protein; NSLTP2,	99.45
1n89_A	67	Lipid transfer protein; lipid transport; HET: PGM;	99.43
1hyp_A	80	Hydrophobic protein from soybean; hydrophobic SEED	96.21
3ob4_A	500	Conglutin, maltose ABC transporter periplasmic pro	95.38
1hss_A	124	0.19 alpha-amylase inhibitor; cereal inhibitor, an	90.69
1b1u_A	122	Protein (alpha-amylase/trypsin inhibitor RATI); bi	90.52
1pnb_B	75	Napin BNIB; napin IA and IB, albumin SEED protein,	90.33
1s6d_A	103	Albumin 8; all helix, folded LEAF, right-handed su	89.39
1sm7_A	109	Recombinant IB pronapin; all alpha-helix, right-ha	89.2
2ds2_B	72	Sweet protein mabinlin-2 chain B; plant protein, S	86.62
1bea_A	127	Bifunctional amylase/serine protease inhibitor; am	84.3
2lvf_A	114	2S albumin; allergen, copper binding, hydrophobic	81.51

>2ljo_A Non-specific lipid-transfer protein 2; lipid transport; NMR {Lens culinaris}

Probab=99.70  E-value=6.8e-19  Score=128.59  Aligned_cols=82  Identities=37%  Similarity=0.818  Sum_probs=69.5

Q ss_pred             CCChhhccCcccchhhhhCCCCCCChhHHHHHHhhhc---C--CCcccceeccCCCCCCCcccChHHhhhccCCcccCCC
Q 030070           26 SGCTTVLVGLAPCLNYITGNSSTPSSSCCSQLASVVQ---S--QPRCLCSVLNSGGSSLGIAINQSQALALPGACNVQTP  100 (183)
Q Consensus        26 ~~C~~v~~~L~pCl~yv~g~~~~Ps~~CC~~l~~v~~---s--~~~CLC~~l~~~~~~~g~~in~trA~~LP~~Cgv~~P  100 (183)
                      .+|.+++..|.||++||+|++ .|+..||++++++++   +  +++|+|++|++.+..+ ..||.+||..||++|||++|
T Consensus         2 isC~~v~~~L~pCl~Yv~g~~-~p~~~CC~gv~~l~~~a~t~~dr~~~C~clk~~a~~~-~~in~~~a~~LP~~CgV~~p   79 (93)
T 2ljo_A            2 ISCGAVTSDLSPCLTYLTGGP-GPSPQCCGGVKKLLAAANTTPDRQAACNCLKSAAGSI-TKLNTNNAAALPGKCGVNIP   79 (93)
T ss_dssp             CSSHHHHHHHHHHHHHHTTSS-CCCHHHHHHHHHHHHSCCSHHHHHHHHHHHHHHGGGC-TTCCHHHHHHHHHHHTCCCS
T ss_pred             CCHHHHHHHHHhHHHHHcCCC-CCCCchhhHHHHHHHHhcCcccHHHHHHhHHhhhhcc-CCcCHHHHHhhhHhcCCCCC
Confidence            689999999999999999875 699999999999864   2  4689999999865443 47999999999999999998


Q ss_pred             ----CCCCCCCCC
Q 030070          101 ----PASQCNTVN  109 (183)
Q Consensus       101 ----p~s~C~~~~  109 (183)
                          +.++|+++.
T Consensus        80 ~~Is~~~dC~~v~   92 (93)
T 2ljo_A           80 YKISTTTNCNTVK   92 (93)
T ss_dssp             SCCSTTCCGGGCC
T ss_pred             CCCCCCCCCCCCC
Confidence                456998764

>1afh_A Maize nonspecific lipid transfer protein; lipid-binding protein, molecular modeling,; NMR {Zea mays} SCOP: a.52.1.1 PDB: 1fk0_A* 1fk1_A* 1fk2_A* 1fk3_A* 1fk4_A* 1fk5_A* 1fk6_A* 1fk7_A* 1mzl_A 1mzm_A* 1bv2_A 1rzl_A* 1uva_A* 1uvb_A* 1uvc_A*

Probab=99.66  E-value=7.1e-18  Score=122.88  Aligned_cols=80  Identities=30%  Similarity=0.762  Sum_probs=65.6

Q ss_pred             CCChhhccCcccchhhhhCCCCCCChhHHHHHHhhhc---C----CCcccceeccCCCCCCCcccChHHhhhccCCcccC
Q 030070           26 SGCTTVLVGLAPCLNYITGNSSTPSSSCCSQLASVVQ---S----QPRCLCSVLNSGGSSLGIAINQSQALALPGACNVQ   98 (183)
Q Consensus        26 ~~C~~v~~~L~pCl~yv~g~~~~Ps~~CC~~l~~v~~---s----~~~CLC~~l~~~~~~~g~~in~trA~~LP~~Cgv~   98 (183)
                      .+|.++...|.||++|+++++..|+..||++++++++   +    +..|+|.  +..+..++ +||.++|++||++|||+
T Consensus         2 ~~C~~v~~~L~pCl~y~~~~~~~Ps~~CC~gv~~l~~~a~t~~dr~~~ClC~--~~~~~~~~-~in~~~A~~LP~~C~v~   78 (93)
T 1afh_A            2 ISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCL--KNAAAGVS-GLNAGNAASIPSKCGVS   78 (93)
T ss_dssp             CSSHHHHHHHGGGHHHHTTSCCSCCHHHHHHHHHHHHHCCSSHHHHHHHHHH--HHHHTTST-TCCHHHHHHHHHHHHCC
T ss_pred             CChHHHHHhccCcHHHHcCCCCCChHHHHHHHHHHHHhhcCCCCCcccCEee--cccccccc-CcCHHHHHHHHHHcCCC
Confidence            5799999999999999999877899999999999862   2    3589994  44334554 69999999999999999


Q ss_pred             CC----CCCCCCCC
Q 030070           99 TP----PASQCNTV  108 (183)
Q Consensus        99 ~P----p~s~C~~~  108 (183)
                      +|    +..+|+++
T Consensus        79 ~p~~is~~~dC~~v   92 (93)
T 1afh_A           79 IPYTISTSTDCSRV   92 (93)
T ss_dssp             CSSCCSTTCCSSSC
T ss_pred             CCCCCCCCCCCccC
Confidence            87    23588865

>1bwo_A NS-LTP1, nonspecific lipid-transfer protein; wheat, lipid binding, crystallography; HET: LPC; 2.10A {Triticum aestivum} SCOP: a.52.1.1 PDB: 1cz2_A* 1gh1_A 1be2_A* 1jtb_A* 1lip_A 1mid_A* 3cee_A* 3gsh_A*

Probab=99.64  E-value=1.1e-17  Score=121.19  Aligned_cols=78  Identities=29%  Similarity=0.692  Sum_probs=64.4

Q ss_pred             CCChhhccCcccchhhhhCCCCCCChhHHHHHHhhhc---C----CCcccceeccCCCCCCCcccChHHhhhccCCcccC
Q 030070           26 SGCTTVLVGLAPCLNYITGNSSTPSSSCCSQLASVVQ---S----QPRCLCSVLNSGGSSLGIAINQSQALALPGACNVQ   98 (183)
Q Consensus        26 ~~C~~v~~~L~pCl~yv~g~~~~Ps~~CC~~l~~v~~---s----~~~CLC~~l~~~~~~~g~~in~trA~~LP~~Cgv~   98 (183)
                      .+|.++...|.||++|+++++. |+..||++++++++   +    |..|+|  +++.+..++ +||.++|++||++|||+
T Consensus         1 i~C~~v~~~L~pCl~y~~~~~~-Ps~~CC~~lk~l~~~a~t~~dr~~~ClC--lk~~~~~~~-~in~~~A~~LP~~C~v~   76 (90)
T 1bwo_A            1 IDCGHVDSLVRPCLSYVQGGPG-PSGQCCDGVKNLHNQARSQSDRQSACNC--LKGIARGIH-NLNEDNARSIPPKCGVN   76 (90)
T ss_dssp             CCHHHHHHHHGGGHHHHTTCSC-CCHHHHHHHHHHHHHCCSHHHHHHHHHH--HHHHHTTCT-TCCHHHHHTHHHHHTCC
T ss_pred             CCHHHHHHhhcccHHHHcCCCC-CCHHHhHHHHHHHhhccCCCCCCccCcC--ccCchhccC-CcCHHHHHHHHHHcCCC
Confidence            3699999999999999999875 99999999999873   2    568999  565555564 69999999999999999


Q ss_pred             CC-C---CCCCCC
Q 030070           99 TP-P---ASQCNT  107 (183)
Q Consensus        99 ~P-p---~s~C~~  107 (183)
                      +| +   ..+|++
T Consensus        77 ~p~~is~~~dC~~   89 (90)
T 1bwo_A           77 LPYTISLNIDCSR   89 (90)
T ss_dssp             CSSCCCTTCCGGG
T ss_pred             CCCCCCCCCCCCC
Confidence            87 2   347764

>1siy_A LTP 1, NS-LTP1, nonspecific lipid-transfer protein 1; alpha helix, lipid binding protein; NMR {Vigna radiata var}

Probab=99.64  E-value=1.8e-17  Score=120.28  Aligned_cols=79  Identities=30%  Similarity=0.738  Sum_probs=64.9

Q ss_pred             CCChhhccCcccchhhhhCCCCCCChhHHHHHHhhhcC-------CCcccceeccCCCCCCCcccChHHhhhccCCcccC
Q 030070           26 SGCTTVLVGLAPCLNYITGNSSTPSSSCCSQLASVVQS-------QPRCLCSVLNSGGSSLGIAINQSQALALPGACNVQ   98 (183)
Q Consensus        26 ~~C~~v~~~L~pCl~yv~g~~~~Ps~~CC~~l~~v~~s-------~~~CLC~~l~~~~~~~g~~in~trA~~LP~~Cgv~   98 (183)
                      .+|.++...|.||++|+++++. |+..||++++++++.       |..|+|  +++....++ +||.++|++||++|||+
T Consensus         1 i~C~~v~~~L~pCl~yv~~~~~-Ps~~CC~~lk~l~~~a~t~~d~~~~ClC--~k~~~~~~~-~in~~~A~~LP~~Cgv~   76 (91)
T 1siy_A            1 MTCGQVQGNLAQCIGFLQKGGV-VPPSCCTGVKNILNSSRTTADRRAVCSC--LKAAAGAVR-GINPNNAEALPGKCGVN   76 (91)
T ss_dssp             CCTTTTHHHHHHHHHHHTSCSC-CCHHHHHHHHHHHTTTCSSHHHHHHHHH--HHHHTTCCS-SCCHHHHHHHHHHHTCC
T ss_pred             CCHHHHHHhccCcHHHHhCCCC-CcHHHHHHHHHHHhhhccCCCCCcCCcc--cCCcccccC-CcCHHHHHHHHHHcCCC
Confidence            3799999999999999998875 999999999998642       458999  455555664 69999999999999999


Q ss_pred             CC----CCCCCCCC
Q 030070           99 TP----PASQCNTV  108 (183)
Q Consensus        99 ~P----p~s~C~~~  108 (183)
                      +|    +..+|+++
T Consensus        77 ~p~~is~~~dC~~v   90 (91)
T 1siy_A           77 IPYKISTSTNCNSI   90 (91)
T ss_dssp             CSSCSCTTSCSSTT
T ss_pred             CCCCCCCCCCCccC
Confidence            87    33588864

>1t12_A LTP 1, nonspecific lipid-transfer protein 1; cystein rich protein, lipid transport; NMR {Nicotiana tabacum}

Probab=99.63  E-value=1.1e-17  Score=121.56  Aligned_cols=78  Identities=36%  Similarity=0.803  Sum_probs=65.0

Q ss_pred             CCChhhccCcccchhhhhCCCCCCChhHHHHHHhhhcC-------CCcccceeccCCCCCCCcccChHHhhhccCCcccC
Q 030070           26 SGCTTVLVGLAPCLNYITGNSSTPSSSCCSQLASVVQS-------QPRCLCSVLNSGGSSLGIAINQSQALALPGACNVQ   98 (183)
Q Consensus        26 ~~C~~v~~~L~pCl~yv~g~~~~Ps~~CC~~l~~v~~s-------~~~CLC~~l~~~~~~~g~~in~trA~~LP~~Cgv~   98 (183)
                      .+|.++...|.||++|+++++. |+ .||++++++++.       +..|+|  +++.+..++ +||.++|++||++|||+
T Consensus         2 ~~C~~v~~~L~pCl~y~~~~~~-P~-~CC~gv~~l~~~a~t~~dr~~~ClC--lk~~~~~~~-~in~~~A~~LP~~C~v~   76 (91)
T 1t12_A            2 ITCGQVTSNLAPCLAYLRNTGP-LG-RCCGGVKALVNSARTTEDRQIACTC--LKSAAGAIS-GINLGKAAGLPSTCGVN   76 (91)
T ss_dssp             CCHHHHHHHTHHHHHHHTTSSC-CT-THHHHHHHHHHTTCSTHHHHHHHHH--HHHHHHHCT-TCCHHHHHHHHHHTTCC
T ss_pred             CChHHHHHhccCcHHHHcCCCC-hH-HHHHHHHHHHhhccCCCCCCccCCC--ccccccccC-CcChhHHHHHHHHcCCC
Confidence            5799999999999999999877 88 999999998752       579999  455444565 79999999999999999


Q ss_pred             CC----CCCCCCCC
Q 030070           99 TP----PASQCNTV  108 (183)
Q Consensus        99 ~P----p~s~C~~~  108 (183)
                      +|    +..+|+++
T Consensus        77 ~p~~is~~~dC~~v   90 (91)
T 1t12_A           77 IPYKISPSTDCSKV   90 (91)
T ss_dssp             CSSCSSSSSCCTTC
T ss_pred             CCCCCCCCCCCccC
Confidence            87    23588865

>2alg_A Non-specific lipid transfer protein; LTP, NS-LTP, FOOD allergen, lipid transport; HET: DAO P6G; 2.30A {Prunus persica} PDB: 2b5s_A*

Probab=99.62  E-value=1.3e-17  Score=121.22  Aligned_cols=79  Identities=34%  Similarity=0.727  Sum_probs=64.6

Q ss_pred             CCChhhccCcccchhhhhCCCCCCChhHHHHHHhhh-------cCCCcccceeccCCCCCCCcccChHHhhhccCCcccC
Q 030070           26 SGCTTVLVGLAPCLNYITGNSSTPSSSCCSQLASVV-------QSQPRCLCSVLNSGGSSLGIAINQSQALALPGACNVQ   98 (183)
Q Consensus        26 ~~C~~v~~~L~pCl~yv~g~~~~Ps~~CC~~l~~v~-------~s~~~CLC~~l~~~~~~~g~~in~trA~~LP~~Cgv~   98 (183)
                      .+|.++...|.||++|+++++ .|++.||++|++++       +++..|+|.+.  ....++ +||.++|++||++|||+
T Consensus         2 ~~C~~v~~~L~pCl~y~~~~~-~p~~~CC~~lk~l~~~a~t~~d~~~~ClC~~~--~~~~~~-~in~~~A~~LP~~Cgv~   77 (92)
T 2alg_A            2 ITCGQVSSSLAPCIPYVRGGG-AVPPACCNGIRNVNNLARTTPDRQAACNCLKQ--LSASVP-GVNPNNAAALPGKCGVS   77 (92)
T ss_dssp             CCHHHHHHHHGGGHHHHHHCS-CCCHHHHHHHHHHHHHCCSHHHHHHHHHHHHH--HHHHST-TCCHHHHHHHHHHTTCC
T ss_pred             CChHHHHHhccCcHHHHcCCC-CCCHHHHHHHHHHHhhhcccCCCCcCCccccC--cccccC-ccChHHHHHHHHHcCCC
Confidence            579999999999999999876 58999999999987       34578999643  334554 69999999999999999


Q ss_pred             CC----CCCCCCCC
Q 030070           99 TP----PASQCNTV  108 (183)
Q Consensus        99 ~P----p~s~C~~~  108 (183)
                      +|    +..+|+++
T Consensus        78 ~p~~is~~~dC~~v   91 (92)
T 2alg_A           78 IPYKISASTNCATV   91 (92)
T ss_dssp             CSSCSSTTSCGGGC
T ss_pred             CCCCCCCCCCCccC
Confidence            87    23588764

>2rkn_A DIR1 protein, AT5G48485; LTP, defense signaling protein, signaling protein, lipid TRA; HET: LP3; 1.60A {Arabidopsis thaliana}

Probab=99.55  E-value=2.2e-16  Score=111.04  Aligned_cols=73  Identities=30%  Similarity=0.563  Sum_probs=61.0

Q ss_pred             ccCCChhhccCcccchhhhhC-CCCCCChhHHHHHHhhhcCCCcccceeccCC-CCCCCcccChHHhhhccCCcccCCCC
Q 030070           24 AQSGCTTVLVGLAPCLNYITG-NSSTPSSSCCSQLASVVQSQPRCLCSVLNSG-GSSLGIAINQSQALALPGACNVQTPP  101 (183)
Q Consensus        24 A~~~C~~v~~~L~pCl~yv~g-~~~~Ps~~CC~~l~~v~~s~~~CLC~~l~~~-~~~~g~~in~trA~~LP~~Cgv~~Pp  101 (183)
                      ++.+|.++...|.||++|+++ +...|+..||++|++.   +..|||.++++. ..++  +||.++|++||++|||++|+
T Consensus         1 ~~~~C~~~~~~L~pC~~yv~~~~~~~Ps~~CC~~lk~~---~~~ClC~~~~~~~~~~~--gin~~~A~~LP~~Cgv~~p~   75 (77)
T 2rkn_A            1 AIDLCGMSQDELNECKPAVSKENPTSPSQPCCTALQHA---DFACLCGYKNSPWLGSF--GVDPELASALPKQCGLANAP   75 (77)
T ss_dssp             CCCBTTBCHHHHHHHGGGGBSSSCCCCCHHHHHHHTTC---CHHHHHTTTTCHHHHHH--TBCHHHHHHHHHHTTCSCCC
T ss_pred             CcchHHhHHHhHhhCHHHHcCCCCCCCCHHHHHHHHhc---CcCCcCcccCCcchhhc--CcCHHHHHHHHHHcCCCCCC
Confidence            357899999999999999997 3468999999999973   679999887753 2334  48999999999999999875

>1l6h_A LTP2, non-specific lipid transfer protein; NSLTP2, plant LTP, lipid transport; NMR {Oryza sativa} SCOP: a.52.1.1

Probab=99.45  E-value=1.3e-14  Score=100.25  Aligned_cols=68  Identities=29%  Similarity=0.709  Sum_probs=56.4

Q ss_pred             CChhhccCcccchhhhhCCCCCCChhHHHHHHhhhcCCCcccceeccCCCCCCCcccChHHhhhccCCcccCCCCCCCCC
Q 030070           27 GCTTVLVGLAPCLNYITGNSSTPSSSCCSQLASVVQSQPRCLCSVLNSGGSSLGIAINQSQALALPGACNVQTPPASQCN  106 (183)
Q Consensus        27 ~C~~v~~~L~pCl~yv~g~~~~Ps~~CC~~l~~v~~s~~~CLC~~l~~~~~~~g~~in~trA~~LP~~Cgv~~Pp~s~C~  106 (183)
                      .|+  ..+|.||++||+++. .|+..||++|++    +..|+|+++++..  ++..||.++|++||++|||++|   +|+
T Consensus         2 ~C~--~~~L~pC~~~v~~~~-~Ps~~CC~~lk~----~~~ClC~~~k~~~--~~~~in~~~A~~Lp~~Cgv~~P---~C~   69 (69)
T 1l6h_A            2 GCN--AGQLTVCTGAIAGGA-RPTAACCSSLRA----QQGCFCQFAKDPR--YGRYVNSPNARKAVSSCGIALP---TCH   69 (69)
T ss_dssp             CST--TTTHHHHHHHHTTCC-STTHHHHHHHHH----HHHHHHHHTTCSS--HHHHTTTTTGGGCCCCCSSCSC---CCC
T ss_pred             CCC--hhhcccCHHHHcCCC-CCCHHHHHhhCC----CCCCCCccccCcc--cccccCHHHHHHHHHHcCCCCC---CCC
Confidence            354  457999999999874 799999999998    3789999998753  3446999999999999999886   564

>1n89_A Lipid transfer protein; lipid transport; HET: PGM; NMR {Triticum turgidum subsp} SCOP: a.52.1.1 PDB: 1tuk_A*

Probab=99.43  E-value=1.6e-14  Score=99.19  Aligned_cols=62  Identities=27%  Similarity=0.555  Sum_probs=53.4

Q ss_pred             ccCcccchhhhhCCCCCCChhHHHHHHhhhcCCCcccceeccCCCCCCCcccChHHhhhccCCcccCCC
Q 030070           32 LVGLAPCLNYITGNSSTPSSSCCSQLASVVQSQPRCLCSVLNSGGSSLGIAINQSQALALPGACNVQTP  100 (183)
Q Consensus        32 ~~~L~pCl~yv~g~~~~Ps~~CC~~l~~v~~s~~~CLC~~l~~~~~~~g~~in~trA~~LP~~Cgv~~P  100 (183)
                      ...|.||++||+++. .|+..||++|++    +..|+|+++++..  ++..||.++|++||++|||++|
T Consensus         4 ~~~L~pC~~~v~~~~-~Ps~~CC~~lk~----~~~ClC~~~k~~~--~~~~in~~~A~~Lp~~Cgv~~P   65 (67)
T 1n89_A            4 ASQLAVCASAILSGA-KPSGECCGNLRA----QQGCFCQYAKDPT--YGQYIRSPHARDTLTSCGLAVP   65 (67)
T ss_dssp             SSTTHHHHHHHTTCC-CCCHHHHHHHHH----HSSHHHHGGGCST--THHHHTCHHHHHHHHHHTSCCS
T ss_pred             hhhcccCHHHHcCCC-CCCHHHHHhhCC----CCCCCCccccCcc--cccccCHHHHHHHHHHcCCCCC
Confidence            357999999999874 799999999998    4789999998853  3346999999999999999886

>1hyp_A Hydrophobic protein from soybean; hydrophobic SEED protein; 1.80A {Glycine max} SCOP: a.52.1.1

Probab=96.21  E-value=0.00089  Score=47.12  Aligned_cols=72  Identities=28%  Similarity=0.678  Sum_probs=53.7

Q ss_pred             cCCChhhccCcccchhhhhCCCCCCChhHHHHHHhhhcCC-CcccceeccCCCCCCCcccChHHhhh-ccCCcccCCCCC
Q 030070           25 QSGCTTVLVGLAPCLNYITGNSSTPSSSCCSQLASVVQSQ-PRCLCSVLNSGGSSLGIAINQSQALA-LPGACNVQTPPA  102 (183)
Q Consensus        25 ~~~C~~v~~~L~pCl~yv~g~~~~Ps~~CC~~l~~v~~s~-~~CLC~~l~~~~~~~g~~in~trA~~-LP~~Cgv~~Pp~  102 (183)
                      +..|.    .|.-|.+-+.+.. .|...||.-+++++.-+ ..|||..++.    +|+ +|..-+++ |-+.||-..|+.
T Consensus         5 ~~~CP----kLgvCanvL~g~~-~~~~~CC~Ll~GL~dleAAvCLCtaik~----Lgi-lnlpv~L~llln~Cgk~~P~g   74 (80)
T 1hyp_A            5 RPSCP----DLSICLNILGGSL-GTVDDCCALIGGLGDIEAIVCLCIQLRA----LGI-LNLNRNLQLILNSCGRSYPSN   74 (80)
T ss_dssp             -CCSC----CCGGGGGGGGTCC-TTHHHHHHHHHTSCHHHHHHHHHHHHHH----HTC-SCHHHHHHHHHHHTTCSSCCC
T ss_pred             CCCCC----chhHHHHHhCcCC-CCCCccchhhhCcchhhhhhhhhhhccc----cce-eecChhHHHHHHHhCCcCcCC
Confidence            35676    6888999886532 36688999999987543 4999988772    455 67666666 457899999999


Q ss_pred             CCCC
Q 030070          103 SQCN  106 (183)
Q Consensus       103 s~C~  106 (183)
                      ++|.
T Consensus        75 F~C~   78 (80)
T 1hyp_A           75 ATCP   78 (80)
T ss_dssp             CCCS
T ss_pred             CCCC
Confidence            9996

>3ob4_A Conglutin, maltose ABC transporter periplasmic protein, ARAH; alpha-amylase inhibitors (AAI), lipid transfer (LT) and SEED (SS) protein family; HET: MLR; 2.71A {Escherichia coli}

Probab=95.38  E-value=0.00041  Score=62.07  Aligned_cols=77  Identities=22%  Similarity=0.608  Sum_probs=50.2

Q ss_pred             CCChhh--ccCcccchhhhhCCCCCCC-------------------------------hhHHHHHHhhhcCCCcccceec
Q 030070           26 SGCTTV--LVGLAPCLNYITGNSSTPS-------------------------------SSCCSQLASVVQSQPRCLCSVL   72 (183)
Q Consensus        26 ~~C~~v--~~~L~pCl~yv~g~~~~Ps-------------------------------~~CC~~l~~v~~s~~~CLC~~l   72 (183)
                      ..|...  ..+|.+|+.|+..+-...+                               ..||++|+.+ ..+++|.|..|
T Consensus       371 e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cc~~l~~~-~~~~~c~c~~~  449 (500)
T 3ob4_A          371 RRCQSQLERANLRPCEQHLMQKIQRDEDSYERDPYSPSQDPYSPSPYDRRGAGSSQHQERCCNELNEF-ENNQRCMCEAL  449 (500)
T ss_dssp             CCHHHHHHHCCCHHHHHHHHHHHHTTSCC--CCCSSTTSCC---------------CHHHHHHHHGGG-TTCHHHHHHHH
T ss_pred             HHHHHHHHhccCChHHHHHHHHhhccccccccCCCCcCCCCCCCCccccCCCccchHHHHHHHHHHhC-CcccccccHHH
Confidence            457655  3579999999964200011                               6799999987 11289999877


Q ss_pred             cCCCCCC-----C----cccChHHhhhccCCcccCCCCCCCCC
Q 030070           73 NSGGSSL-----G----IAINQSQALALPGACNVQTPPASQCN  106 (183)
Q Consensus        73 ~~~~~~~-----g----~~in~trA~~LP~~Cgv~~Pp~s~C~  106 (183)
                      ....+..     |    ..+ ..+|..||..||+..|  ..|+
T Consensus       450 ~~~~~~~~~~~~~~~~~~~~-~~~a~~~p~~c~~~~~--~~c~  489 (500)
T 3ob4_A          450 QQIMENQSDRLQGRQQEQQF-KRELRNLPQQCGLRAP--QRCD  489 (500)
T ss_dssp             HHHHHHHHTTCCSSHHHHHH-HHHHHTHHHHTTCCCC--SCCC
T ss_pred             HHHHHHHHHHhhhHHHHHHH-HHHHhhCchhcCCCCC--ccCC
Confidence            6532210     0    112 3459999999999743  5897

>1hss_A 0.19 alpha-amylase inhibitor; cereal inhibitor, animal amylase; 2.06A {Triticum aestivum} SCOP: a.52.1.2

Probab=90.69  E-value=0.0092  Score=45.20  Aligned_cols=67  Identities=28%  Similarity=0.470  Sum_probs=43.1

Q ss_pred             CcccchhhhhCC---CCCC---ChhHHHHHHhhhcCCCcccceeccCCCC----CCC--------ccc-------ChHHh
Q 030070           34 GLAPCLNYITGN---SSTP---SSSCCSQLASVVQSQPRCLCSVLNSGGS----SLG--------IAI-------NQSQA   88 (183)
Q Consensus        34 ~L~pCl~yv~g~---~~~P---s~~CC~~l~~v~~s~~~CLC~~l~~~~~----~~g--------~~i-------n~trA   88 (183)
                      .|..|..||...   ...|   ...||++|+.+   ...|.|..|.....    ..|        -.+       -..+|
T Consensus        16 pL~~Cr~Yv~~~C~g~~~p~~~~~~CC~QL~~i---~~~CRC~ALr~m~~~~~~~~g~~~g~~~~e~~pgCrre~~~~~A   92 (124)
T 1hss_A           16 ALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHI---SEWCRCGALYSMLDSMYKEHGAQEGQAGTGAFPRCRREVVKLTA   92 (124)
T ss_dssp             CCTTHHHHHHHHTTTCCCCHHHHHHHHHHHHTS---CTTTHHHHHHHHHHHHHHHC---------CCSTTCCHHHHHHHH
T ss_pred             cchHHHHHHHHHccCCCCcHHHHHHHHHHHHhc---CcccchHHHHHHHHhhhhhhhhhccccchhhccCCcHHHHHHHH
Confidence            377899999632   1123   35699999998   78999986654211    011        011       11258


Q ss_pred             hhccCCcccCCC-CCC
Q 030070           89 LALPGACNVQTP-PAS  103 (183)
Q Consensus        89 ~~LP~~Cgv~~P-p~s  103 (183)
                      ..||..||+.++ +..
T Consensus        93 ~~LP~~Cnl~~~~~g~  108 (124)
T 1hss_A           93 ASITAVCRLPIVVDAS  108 (124)
T ss_dssp             TTHHHHTTCCEECSTT
T ss_pred             HhchhhcCCCCCCCCC
Confidence            889999999887 543

>1b1u_A Protein (alpha-amylase/trypsin inhibitor RATI); bifunctional, hydrolase inhibitor; 2.20A {Eleusine coracana} SCOP: a.52.1.2 PDB: 1bip_A 1tmq_B

Probab=90.52  E-value=0.032  Score=42.03  Aligned_cols=70  Identities=23%  Similarity=0.466  Sum_probs=44.4

Q ss_pred             CcccchhhhhCC----CC-CC----ChhHHHHHHhhhcCCCcccceeccCCCC-CC-------C---ccc-------ChH
Q 030070           34 GLAPCLNYITGN----SS-TP----SSSCCSQLASVVQSQPRCLCSVLNSGGS-SL-------G---IAI-------NQS   86 (183)
Q Consensus        34 ~L~pCl~yv~g~----~~-~P----s~~CC~~l~~v~~s~~~CLC~~l~~~~~-~~-------g---~~i-------n~t   86 (183)
                      .|..|.+||...    .. .|    -..||++|+.+   ...|-|..|..... .+       |   -.+       -..
T Consensus        16 ~L~~Cr~Yv~~q~C~~g~~~p~~~~~~~CC~QL~~i---~~~CRC~ALr~m~~~~~~~~g~~~g~~~~~~pgC~re~~~~   92 (122)
T 1b1u_A           16 PLDSCRWYVSTRTCGVGPRLATQEMKARCCRQLEAI---PAYCRCEAVRILMDGVVTPSGQHEGRLLQDLPGCPRQVQRA   92 (122)
T ss_dssp             TTTHHHHHHHHHHHCCCCSSCHHHHHHHHHHHHHHS---CHHHHHHHHHHHHTCEECTTSCEECCCCCCCTTCCHHHHHH
T ss_pred             cchHHHHHHHHhcccCCCCCchHHHHHHHHHHHHhC---CccccHHHHHHHHHhhhhhhcccccccchhccCCcHHHHHH
Confidence            377899999632    11 23    35699999998   78999986543211 00       1   011       113


Q ss_pred             Hhhhc--cCCcccCCCCCC-CCC
Q 030070           87 QALAL--PGACNVQTPPAS-QCN  106 (183)
Q Consensus        87 rA~~L--P~~Cgv~~Pp~s-~C~  106 (183)
                      +|..|  |..||+.+++.. .|.
T Consensus        93 ~A~~Lv~P~~Cnl~~~~g~~~C~  115 (122)
T 1b1u_A           93 FAPKLVTEVECNLATIHGGPFCL  115 (122)
T ss_dssp             HGGGTTSTTTTCCCCTTSSSCCS
T ss_pred             HHHhcCCcccCCCCCCCCCcccc
Confidence            57889  999999887532 554

>1pnb_B Napin BNIB; napin IA and IB, albumin SEED protein, SEED storage protein; NMR {Brassica napus} SCOP: a.52.1.3

Probab=90.33  E-value=0.061  Score=36.96  Aligned_cols=55  Identities=24%  Similarity=0.492  Sum_probs=37.6

Q ss_pred             CCChhHHHHHHhhhcCCCcccceeccCCCC------CCCc---ccChHHhhhccCCcccCCCCCCCCCC
Q 030070           48 TPSSSCCSQLASVVQSQPRCLCSVLNSGGS------SLGI---AINQSQALALPGACNVQTPPASQCNT  107 (183)
Q Consensus        48 ~Ps~~CC~~l~~v~~s~~~CLC~~l~~~~~------~~g~---~in~trA~~LP~~Cgv~~Pp~s~C~~  107 (183)
                      ..-..||+.|+.+   ++.|.|..|.....      .++-   .-...+|..||..||+..+  ..|.-
T Consensus         9 ~~~qqCC~qL~~~---~~~CrC~aL~~~~~~~~~qgq~~~~q~~~~~q~a~~LP~~Cnl~~~--~~C~~   72 (75)
T 1pnb_B            9 WLREQCCNELYQE---DQVCVCPTLKQAAKSVRVQGQHGPFQSTRIYQIAKNLPNVCNMKQI--GTCPF   72 (75)
T ss_dssp             SCTHHHHHHHHTS---CGGGSHHHHHHHHHHHHSGGGCSSCCHHHHHHHCCSCSCSSCCTTT--CCCCC
T ss_pred             HHHHHHHHHHHhC---CcccccHHHHHHHHHHHHHcccchHHHHHHHHHHHhhHHhcCCCCC--CCCCc
Confidence            4557899999998   79999987765321      1211   1124568899999999643  57763

>1s6d_A Albumin 8; all helix, folded LEAF, right-handed superhelix, disulphide rich, plant protein; NMR {Helianthus annuus} SCOP: a.52.1.3

Probab=89.39  E-value=0.16  Score=36.88  Aligned_cols=70  Identities=27%  Similarity=0.486  Sum_probs=47.7

Q ss_pred             CCChhhc--cC-cccchhhhhCCC------------CCCChhHHHHHHhhhcCCCcccceeccCCC-CCCC---cccChH
Q 030070           26 SGCTTVL--VG-LAPCLNYITGNS------------STPSSSCCSQLASVVQSQPRCLCSVLNSGG-SSLG---IAINQS   86 (183)
Q Consensus        26 ~~C~~v~--~~-L~pCl~yv~g~~------------~~Ps~~CC~~l~~v~~s~~~CLC~~l~~~~-~~~g---~~in~t   86 (183)
                      ..|...+  .. |..|..||....            ...-..||+.|+.+   +..|.|..|.... ..++   ..-...
T Consensus         9 q~C~qq~q~~q~L~~Cq~yv~qq~~~~~~~~~~~~~e~~~qqCC~qL~~~---~~~CrC~al~~~~Q~q~~g~q~~~~~q   85 (103)
T 1s6d_A            9 SGCYQQMEEAEMLNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNL---DEKCMCPAIMMMLNEPMWIRMRDQVMS   85 (103)
T ss_dssp             SSHHHHHHHTCSTTHHHHHHTTTTSSCCCCSSSCCCCCCSHHHHHHHHHS---CGGGSSHHHHHHTTSTTCSSTHHHHHH
T ss_pred             cccHHHHHhChhHHHHHHHHHHHhhccCCcccccccHHHHHHHHHHHHhc---CcccCcHHHHHHHHHHhcchhHHHHHH
Confidence            4576654  35 899999997421            12357899999997   7899999876432 1121   111245


Q ss_pred             HhhhccCCcccC
Q 030070           87 QALALPGACNVQ   98 (183)
Q Consensus        87 rA~~LP~~Cgv~   98 (183)
                      +|..||..||+.
T Consensus        86 ~A~~LP~~C~i~   97 (103)
T 1s6d_A           86 MAHNLPIECNLM   97 (103)
T ss_dssp             HHHHHHHHTTSS
T ss_pred             HHHhcHHhcCCC
Confidence            688999999995

>1sm7_A Recombinant IB pronapin; all alpha-helix, right-handed superhelix, plant protein; NMR {Brassica napus}

Probab=89.20  E-value=0.059  Score=39.41  Aligned_cols=67  Identities=25%  Similarity=0.567  Sum_probs=44.2

Q ss_pred             cccchhhhhCC----C--CCC---------ChhHHHHHHhhhcCCCcccceeccCCCCC------CCc---ccChHHhhh
Q 030070           35 LAPCLNYITGN----S--STP---------SSSCCSQLASVVQSQPRCLCSVLNSGGSS------LGI---AINQSQALA   90 (183)
Q Consensus        35 L~pCl~yv~g~----~--~~P---------s~~CC~~l~~v~~s~~~CLC~~l~~~~~~------~g~---~in~trA~~   90 (183)
                      |.+|..||...    .  ..|         -..||+.|+.+   +..|.|..|......      ++-   .-...+|..
T Consensus        15 L~~C~~yv~qq~~~~~~~~~~~~~~~~~~~~qqCC~qL~~v---~~qCrC~al~~~v~~~~~qgq~~~~~~~~~~~~a~~   91 (109)
T 1sm7_A           15 LRACQQWIRQQLAGSPFSENQWGPQQGPSLREQCCNELYQE---DQVCVCPTLKQAAKSVRVQGQHGPFQSTRIYQIAKN   91 (109)
T ss_dssp             CSSHHHHGGGGTTSSCCCSCSSSCTTCCTTHHHHHHHTTTT---CHHHHTTTTHHHHHTSSCSSCCCTTHHHHHHHTTSS
T ss_pred             HHHHHHHHHHHhcCCCcccccccccccHHHHHHHHHHHHhc---CccCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHh
Confidence            89999999731    1  112         25799999998   789999887653211      110   112345788


Q ss_pred             ccCCcccCCCCCCCCC
Q 030070           91 LPGACNVQTPPASQCN  106 (183)
Q Consensus        91 LP~~Cgv~~Pp~s~C~  106 (183)
                      ||+.||+..+  ..|.
T Consensus        92 LP~~Cnl~~~--~~C~  105 (109)
T 1sm7_A           92 LPNVCNMKQI--GTCP  105 (109)
T ss_dssp             HHHHSCCCSS--CSSC
T ss_pred             CHHhcCCCCC--CCCC
Confidence            9999999643  4675

>2ds2_B Sweet protein mabinlin-2 chain B; plant protein, SEED storage protein; 1.70A {Capparis masaikai}

Probab=86.62  E-value=0.036  Score=37.96  Aligned_cols=51  Identities=31%  Similarity=0.636  Sum_probs=35.6

Q ss_pred             hhHHHHHHhhhcCCCcccceeccCCCC------C-CCc---ccChHHhhhccCCcccCCCCCCCCC
Q 030070           51 SSCCSQLASVVQSQPRCLCSVLNSGGS------S-LGI---AINQSQALALPGACNVQTPPASQCN  106 (183)
Q Consensus        51 ~~CC~~l~~v~~s~~~CLC~~l~~~~~------~-~g~---~in~trA~~LP~~Cgv~~Pp~s~C~  106 (183)
                      ..||+.|+.+   ++.|.|..|+....      . ++-   .=...+|..||..||+..+  ..|+
T Consensus         8 qqCC~eL~~~---~~~CrC~aL~~~~~~~~qqgq~~~~qq~~~~~q~a~~LP~~C~l~~~--~~C~   68 (72)
T 2ds2_B            8 RQCCNQLRQV---DRPCVCPVLRQAAQQVLQRQIIQGPQQLRRLFDAARNLPNICNIPNI--GACP   68 (72)
T ss_dssp             HHHHHHHTTS---CGGGHHHHHHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHHTTCTTC--CCCC
T ss_pred             HHHHHHHHhc---CccccCHHHHHHHHHHHHhhhhhchHHHHHHHHHHHhhHHhcCCCCC--CcCC
Confidence            5699999997   89999988775431      1 110   1235678899999999632  4676

>1bea_A Bifunctional amylase/serine protease inhibitor; amylase/protease bifunctional inhibitor; 1.95A {Zea mays} SCOP: a.52.1.2 PDB: 1bfa_A

Probab=84.30  E-value=0.37  Score=36.40  Aligned_cols=72  Identities=28%  Similarity=0.583  Sum_probs=45.6

Q ss_pred             CcccchhhhhCC----CC-CC----ChhHHHHHHhhhcCCCcccceeccCCCC---------CC-Cc--cc-------Ch
Q 030070           34 GLAPCLNYITGN----SS-TP----SSSCCSQLASVVQSQPRCLCSVLNSGGS---------SL-GI--AI-------NQ   85 (183)
Q Consensus        34 ~L~pCl~yv~g~----~~-~P----s~~CC~~l~~v~~s~~~CLC~~l~~~~~---------~~-g~--~i-------n~   85 (183)
                      .|..|..||...    +. .|    ...||++|+.+   ...|-|..|.....         .. |.  .+       -.
T Consensus        16 pL~~CR~Yv~~q~C~~g~~~p~e~~~~~CC~QL~~i---~~~CRC~ALr~m~~~~~~~~~~~~~~G~~~~~pgC~re~~~   92 (127)
T 1bea_A           16 PLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADI---PAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQR   92 (127)
T ss_dssp             CCHHHHHHHHHHHHSCCCSSCHHHHHHHHHHHHHTS---CGGGHHHHHHHHHHCBCCCSSSCCCBCCCCCBTTBCHHHHH
T ss_pred             cchHHHHHHHHhhcccCCCCchHHHHHHHHHHHHhc---CcccchHHHHHHHHhhhcccccccccccccccCCCcHHHHH
Confidence            377899999632    21 23    34599999998   78999986543210         00 11  11       03


Q ss_pred             HHhhhc--cCCcccCCCCCC-CCCCC
Q 030070           86 SQALAL--PGACNVQTPPAS-QCNTV  108 (183)
Q Consensus        86 trA~~L--P~~Cgv~~Pp~s-~C~~~  108 (183)
                      .+|..|  |..||+.+++.. .|...
T Consensus        93 ~~A~~Lv~P~~Cnl~~~~g~~~C~~~  118 (127)
T 1bea_A           93 GFAATLVTEAECNLATISGVAECPWI  118 (127)
T ss_dssp             HHHTTTTSTTTTCCCCTTSSSCCTTT
T ss_pred             HHHHhcCCcccCCCCCCCCCCCCCcc
Confidence            357889  999999887543 67653

>2lvf_A 2S albumin; allergen, copper binding, hydrophobic interaction; NMR {Bertholletia excelsa}

Probab=81.51  E-value=0.056  Score=40.07  Aligned_cols=75  Identities=25%  Similarity=0.542  Sum_probs=47.9

Q ss_pred             CCChhhc---cCcccchhhhhC----CC--CCCC-------hhHHHHHHhhhcCCCcccceeccCCCCC-------CC-c
Q 030070           26 SGCTTVL---VGLAPCLNYITG----NS--STPS-------SSCCSQLASVVQSQPRCLCSVLNSGGSS-------LG-I   81 (183)
Q Consensus        26 ~~C~~v~---~~L~pCl~yv~g----~~--~~Ps-------~~CC~~l~~v~~s~~~CLC~~l~~~~~~-------~g-~   81 (183)
                      ..|...+   ..|..|..||..    ..  ....       ..||+.|+.+   ++.|.|..|+.....       ++ -
T Consensus         6 q~C~~q~q~~~~L~~Cq~yv~qq~~~~~~~~~~~~~~~~~l~~CC~qL~qv---~~~CrC~aL~~~v~~~~qq~~~~~~~   82 (114)
T 2lvf_A            6 EECREQMQRQQMLSHCRMYMRQQMEESTYQTMPRRGMEPHMSECCEQLEGM---DESCRCEGLRMMMRMMQQKEMQPRGE   82 (114)
T ss_dssp             HHHHHHHHHCTHHHHHHHHHHHHHHTTTTCSCCSSSCCHHHHHHHHHHHHS---CHHHHHHHHHHHHHHHHHHHCCCCSH
T ss_pred             HhhHHHHHHhHhHHHHHHHHHHHHhccCCccccccchHHHHHHHHHHHHHC---CcCccCHHHHHHHHHHHHHHhhhhhh
Confidence            3465432   358899999962    11  1111       3499999998   889999877643221       11 0


Q ss_pred             ---ccChHHhhhccCCcccCCCCCCCCCC
Q 030070           82 ---AINQSQALALPGACNVQTPPASQCNT  107 (183)
Q Consensus        82 ---~in~trA~~LP~~Cgv~~Pp~s~C~~  107 (183)
                         .+ ...|..||+.||+.  | ..|.-
T Consensus        83 ~~~~~-~q~A~~LP~~C~i~--p-~~C~f  107 (114)
T 2lvf_A           83 QMRRM-MRLAENIPSRCNLS--P-MRCPM  107 (114)
T ss_dssp             HHHHH-HHHHHHHHHHHCCC--C-SCCTT
T ss_pred             HHHHH-HHHHHhChHhcCCC--c-ccCCC
Confidence               11 34688999999996  3 57864

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	183
d1fk5a_	93	a.52.1.1 (A:) Plant non-specific lipid-transfer pr	9e-18
d1mida_	91	a.52.1.1 (A:) Plant non-specific lipid-transfer pr	4e-16

>d1fk5a_ a.52.1.1 (A:) Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1) {Maize (Zea mays) [TaxId: 4577]} Length = 93

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Plant lipid-transfer and hydrophobic proteins
domain: Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1)
species: Maize (Zea mays) [TaxId: 4577]

 Score = 72.2 bits (177), Expect = 9e-18
 Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 10/91 (10%)

Query: 28  CTTVLVGLAPCLNYITGNSSTPSSSCCSQLASVVQ-----SQPRCLCSVLNSGGSSLGIA 82
           C  V   +APC++Y  G  S PS+ CCS + S+       +  R  C+ L +  +     
Sbjct: 4   CGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAG-VSG 62

Query: 83  INQSQALALPGACNVQTP----PASQCNTVN 109
           +N   A ++P  C V  P     ++ C+ VN
Sbjct: 63  LNAGNAASIPSKCGVSIPYTISTSTDCSRVN 93

>d1mida_ a.52.1.1 (A:) Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1) {Barley (Hordeum vulgare) [TaxId: 4513]} Length = 91

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Plant lipid-transfer and hydrophobic proteins
domain: Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1)
species: Barley (Hordeum vulgare) [TaxId: 4513]

 Score = 67.9 bits (166), Expect = 4e-16
 Identities = 22/89 (24%), Positives = 34/89 (38%), Gaps = 9/89 (10%)

Query: 28  CTTVLVGLAPCLNYITGNSSTPSSSC--CSQLASVVQSQP--RCLCSVLNSGGSSLGIAI 83
           C  V   + PCL Y+ G        C     L +  QS    + +C+ L          +
Sbjct: 3   CGQVDSKMKPCLTYVQGGPGPSGECCNGVRDLHNQAQSSGDRQTVCNCLKGIARG-IHNL 61

Query: 84  NQSQALALPGACNVQTP----PASQCNTV 108
           N + A ++P  CNV  P    P   C+ +
Sbjct: 62  NLNNAASIPSKCNVNVPYTISPDIDCSRI 90

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	183
d1fk5a_	93	Plant non-specific lipid-transfer protein (ns-LTP,	99.68
d1mida_	91	Plant non-specific lipid-transfer protein (ns-LTP,	99.65
d1l6ha_	69	Non-specific lipid-transfer protein homologue (ns-	99.06
d1tuka1	67	Non-specific lipid-transfer protein homologue (ns-	99.04
g1pnb.1	106	Napin BNIb {Rape (Brassica napus) [TaxId: 3708]}	95.17
d1hypa_	75	Soybean hydrophobic protein {Soybean (Glycine max)	92.94
d1s6da_	103	Methionine-rich 2S protein (albumin 8) {Common sun	92.72
d1psya_	125	2S albumin RicC3 {Castor bean (Ricinus communis) [	92.44
d1tmqb_	117	Trypsin/alpha-amylase inhibitor RBI {Eleusine cora	87.79

>d1fk5a_ a.52.1.1 (A:) Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1) {Maize (Zea mays) [TaxId: 4577]}

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Plant lipid-transfer and hydrophobic proteins
domain: Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1)
species: Maize (Zea mays) [TaxId: 4577]

Probab=99.68  E-value=5.9e-19  Score=126.99  Aligned_cols=82  Identities=30%  Similarity=0.738  Sum_probs=69.3

Q ss_pred             CCChhhccCcccchhhhhCCCCCCChhHHHHHHhhhc-----CCCcccceeccCCCCCCCcccChHHhhhccCCcccCCC
Q 030070           26 SGCTTVLVGLAPCLNYITGNSSTPSSSCCSQLASVVQ-----SQPRCLCSVLNSGGSSLGIAINQSQALALPGACNVQTP  100 (183)
Q Consensus        26 ~~C~~v~~~L~pCl~yv~g~~~~Ps~~CC~~l~~v~~-----s~~~CLC~~l~~~~~~~g~~in~trA~~LP~~Cgv~~P  100 (183)
                      .+|.+++..|.||++||+|++..|++.||++++++.+     .+++|+|++|++....+ ..||.+|+.+||++||+++|
T Consensus         2 i~C~~v~~~l~pCl~Yltg~~~~Ps~~CC~gv~~l~~~a~t~~dr~~lC~cl~~~~~~~-~~in~~ra~~LP~~C~v~l~   80 (93)
T d1fk5a_           2 ISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGV-SGLNAGNAASIPSKCGVSIP   80 (93)
T ss_dssp             CCHHHHHHHHGGGHHHHTTCSSSCCHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHTC-TTCCHHHHHHHHHHTTCCCS
T ss_pred             CCHHHHHHHhhhhHHHHhCCCCCCCCchhHHHHHHHHHccCCccHHHHHHhhhhccccc-CCcCHHHHHhhhHhcCCCCC
Confidence            6899999999999999999888899999999988864     25689999998754332 46999999999999999987


Q ss_pred             ----CCCCCCCC
Q 030070          101 ----PASQCNTV  108 (183)
Q Consensus       101 ----p~s~C~~~  108 (183)
                          +.++|+++
T Consensus        81 ~pis~~~dCs~i   92 (93)
T d1fk5a_          81 YTISTSTDCSRV   92 (93)
T ss_dssp             SCCSTTCCGGGC
T ss_pred             CCCCCCCCCCcC
Confidence                45689875

>d1mida_ a.52.1.1 (A:) Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1) {Barley (Hordeum vulgare) [TaxId: 4513]}

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Plant lipid-transfer and hydrophobic proteins
domain: Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1)
species: Barley (Hordeum vulgare) [TaxId: 4513]

Probab=99.65  E-value=2.7e-18  Score=123.11  Aligned_cols=81  Identities=28%  Similarity=0.707  Sum_probs=67.6

Q ss_pred             CCChhhccCcccchhhhhCCCCCCChhHHHHHHhhhc---C--CCcccceeccCCCCCCCcccChHHhhhccCCcccCCC
Q 030070           26 SGCTTVLVGLAPCLNYITGNSSTPSSSCCSQLASVVQ---S--QPRCLCSVLNSGGSSLGIAINQSQALALPGACNVQTP  100 (183)
Q Consensus        26 ~~C~~v~~~L~pCl~yv~g~~~~Ps~~CC~~l~~v~~---s--~~~CLC~~l~~~~~~~g~~in~trA~~LP~~Cgv~~P  100 (183)
                      .+|.++...|.||++|++|++ +|+..||++++++++   +  +++|+|+++++.+..+ ..||.+||.+||++|||++|
T Consensus         1 i~C~~v~~~l~pCl~Yl~g~~-~P~~~CC~gv~~L~~~a~t~~d~~~lC~cl~~~~~~~-~~in~~ra~~LP~~C~v~~p   78 (91)
T d1mida_           1 LNCGQVDSKMKPCLTYVQGGP-GPSGECCNGVRDLHNQAQSSGDRQTVCNCLKGIARGI-HNLNLNNAASIPSKCNVNVP   78 (91)
T ss_dssp             CCHHHHHHHHGGGHHHHTTCS-CCCHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHTC-TTCCHHHHHHHHHHTTCCCC
T ss_pred             CCHHHHHHHHHhhHHHHcCCC-CCCcchhhhHHHHHHHhcCCCcHHHHHHhhhhhcccC-CCcCHHHHHhchHhcCCCCC
Confidence            479999999999999999874 799999999998864   2  4689999998754333 46899999999999999998


Q ss_pred             ----CCCCCCCC
Q 030070          101 ----PASQCNTV  108 (183)
Q Consensus       101 ----p~s~C~~~  108 (183)
                          +.++|+++
T Consensus        79 ~pis~~~dC~~i   90 (91)
T d1mida_          79 YTISPDIDCSRI   90 (91)
T ss_dssp             SCCCTTCCGGGC
T ss_pred             CCCCCCCCCCCC
Confidence                34589865

>d1l6ha_ a.52.1.1 (A:) Non-specific lipid-transfer protein homologue (ns-LTP2) {Rice (Oryza sativa) [TaxId: 4530]}

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Plant lipid-transfer and hydrophobic proteins
domain: Non-specific lipid-transfer protein homologue (ns-LTP2)
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=99.06  E-value=1.5e-11  Score=83.22  Aligned_cols=65  Identities=29%  Similarity=0.690  Sum_probs=56.2

Q ss_pred             CChhhccCcccchhhhhCCCCCCChhHHHHHHhhhcCCCcccceeccCCCCCCCcccChHHhhhccCCcccCCC
Q 030070           27 GCTTVLVGLAPCLNYITGNSSTPSSSCCSQLASVVQSQPRCLCSVLNSGGSSLGIAINQSQALALPGACNVQTP  100 (183)
Q Consensus        27 ~C~~v~~~L~pCl~yv~g~~~~Ps~~CC~~l~~v~~s~~~CLC~~l~~~~~~~g~~in~trA~~LP~~Cgv~~P  100 (183)
                      .|+.  ..|.+|++.|+++. .|+..||+.|++    |..|||+|++++  .++..||..+|.++-..|||++|
T Consensus         2 ~C~p--~~L~~C~~ai~~g~-~PS~~CC~kLke----Q~~ClC~Y~k~P--~~~~yv~spnarkv~~aCgvp~P   66 (69)
T d1l6ha_           2 GCNA--GQLTVCTGAIAGGA-RPTAACCSSLRA----QQGCFCQFAKDP--RYGRYVNSPNARKAVSSCGIALP   66 (69)
T ss_dssp             CSTT--TTHHHHHHHHTTCC-STTHHHHHHHHH----HHHHHHHHTTCS--SHHHHTTTTTGGGCCCCCSSCSC
T ss_pred             CCCh--hhccccHHHHhCCC-CCcHHHHHHHHh----cCCccceeccCc--cHHHHcCCHHHHHHHHhcCCCCC
Confidence            4653  37999999999876 699999999999    578999999986  45557999999999999999987

>d1tuka1 a.52.1.1 (A:1-67) Non-specific lipid-transfer protein homologue (ns-LTP2) {Triticum turgidum [TaxId: 4571]}

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Plant lipid-transfer and hydrophobic proteins
domain: Non-specific lipid-transfer protein homologue (ns-LTP2)
species: Triticum turgidum [TaxId: 4571]

Probab=99.04  E-value=1.5e-11  Score=82.79  Aligned_cols=61  Identities=28%  Similarity=0.585  Sum_probs=54.3

Q ss_pred             cCcccchhhhhCCCCCCChhHHHHHHhhhcCCCcccceeccCCCCCCCcccChHHhhhccCCcccCCC
Q 030070           33 VGLAPCLNYITGNSSTPSSSCCSQLASVVQSQPRCLCSVLNSGGSSLGIAINQSQALALPGACNVQTP  100 (183)
Q Consensus        33 ~~L~pCl~yv~g~~~~Ps~~CC~~l~~v~~s~~~CLC~~l~~~~~~~g~~in~trA~~LP~~Cgv~~P  100 (183)
                      .+|.+|++.|+++. .|+..||+.|++    |..|||+|++++  .+...||..+|.++-+.|||++|
T Consensus         5 ~~L~~C~~Ai~~g~-~PS~~CC~kLke----Q~~ClC~Y~kdP--~~~~yv~spnarkv~~aCgvp~P   65 (67)
T d1tuka1           5 SQLAVCASAILSGA-KPSGECCGNLRA----QQGCFCQYAKDP--TYGQYIRSPHARDTLTSCGLAVP   65 (67)
T ss_dssp             GGGGGGHHHHHHCC-CCCHHHHHHHHH----HGGGHHHHTTCT--TTHHHHTSHHHHHHHHHTTCCCC
T ss_pred             hhccccHHHHhcCC-CCcHHHHHHHHh----cCCccceecCCc--cHHHHcCCHHHHHHHHhcCCCCC
Confidence            47999999999875 799999999999    678999999986  45557999999999999999986

>d1hypa_ a.52.1.1 (A:) Soybean hydrophobic protein {Soybean (Glycine max) [TaxId: 3847]}

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Plant lipid-transfer and hydrophobic proteins
domain: Soybean hydrophobic protein
species: Soybean (Glycine max) [TaxId: 3847]

Probab=92.94  E-value=0.01  Score=39.45  Aligned_cols=68  Identities=26%  Similarity=0.607  Sum_probs=48.1

Q ss_pred             CcccchhhhhCCCCCCChhHHHHHHhhhcCC-CcccceeccCCCCCCCcccChHHhhh-ccCCcccCCCCCCCCCC
Q 030070           34 GLAPCLNYITGNSSTPSSSCCSQLASVVQSQ-PRCLCSVLNSGGSSLGIAINQSQALA-LPGACNVQTPPASQCNT  107 (183)
Q Consensus        34 ~L~pCl~yv~g~~~~Ps~~CC~~l~~v~~s~-~~CLC~~l~~~~~~~g~~in~trA~~-LP~~Cgv~~Pp~s~C~~  107 (183)
                      .+.-|.+-+.+.. .+...||.-+++++.-+ ..|+|..++..    ++ +|..-++. |-+.||-..|+.++|.+
T Consensus         5 Klg~C~nvLg~~~-~~~~~CC~Ll~GL~dleAAvCLCtaika~----~l-lnvpv~l~llln~Cgk~~P~gF~CP~   74 (75)
T d1hypa_           5 DLSICLNILGGSL-GTVDDCCALIGGLGDIEAIVCLCIQLRAL----GI-LNLNRNLQLILNSCGRSYPSNATCPR   74 (75)
T ss_dssp             CCGGGGGGGGTCC-TTHHHHHHHHHTSCHHHHHHHHHHHHHHH----TC-SCHHHHHHHHHHHTTCSSCCCCCCSC
T ss_pred             chhhHHHHhcCcc-CCCCCcchHHhhHHHHHHHHHHHHHHHHh----hh-ccccchHHHHHHHcCCcCcCCCcCCC
Confidence            4667888776653 46688999999886543 48999888752    12 44444443 45789999999999964

>d1s6da_ a.52.1.3 (A:) Methionine-rich 2S protein (albumin 8) {Common sunflower (Helianthus annuus) [TaxId: 4232]}

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Seed storage protein, 2S albumin
domain: Methionine-rich 2S protein (albumin 8)
species: Common sunflower (Helianthus annuus) [TaxId: 4232]

Probab=92.72  E-value=0.022  Score=40.01  Aligned_cols=71  Identities=27%  Similarity=0.449  Sum_probs=47.5

Q ss_pred             cCCChhhc---cCcccchhhhhCC-----CC-------CCChhHHHHHHhhhcCCCcccceeccCCCCCC-C---cccCh
Q 030070           25 QSGCTTVL---VGLAPCLNYITGN-----SS-------TPSSSCCSQLASVVQSQPRCLCSVLNSGGSSL-G---IAINQ   85 (183)
Q Consensus        25 ~~~C~~v~---~~L~pCl~yv~g~-----~~-------~Ps~~CC~~l~~v~~s~~~CLC~~l~~~~~~~-g---~~in~   85 (183)
                      +..|...+   ..|..|..||...     ..       .--..||+.|+.+   ++.|.|..|......- +   +.-=.
T Consensus         8 ~q~C~~q~q~qq~L~~Cq~Yl~q~~~~~~~~~~~~~~e~~~~~CC~qL~q~---~~~CrC~~L~~avq~q~~q~~~~~~~   84 (103)
T d1s6da_           8 ESGCYQQMEEAEMLNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNL---DEKCMCPAIMMMLNEPMWIRMRDQVM   84 (103)
T ss_dssp             SSSHHHHHHHTCSTTHHHHHHTTTTSSCCCCSSSCCCCCCSHHHHHHHHHS---CGGGSSHHHHHHTTSTTCSSTHHHHH
T ss_pred             cccCHHHHHHhHhHHHHHHHHHHHHhccCCCCCccCchHHHHHHHHHHHcC---CCCCcCHHHHHHHHHHHhHHHHHHHH
Confidence            35676443   4699999999631     11       1236799999998   8999998776542211 1   11114


Q ss_pred             HHhhhccCCcccC
Q 030070           86 SQALALPGACNVQ   98 (183)
Q Consensus        86 trA~~LP~~Cgv~   98 (183)
                      ..|..||+.||+.
T Consensus        85 q~Ak~LPs~C~i~   97 (103)
T d1s6da_          85 SMAHNLPIECNLM   97 (103)
T ss_dssp             HHHHHHHHHTTSS
T ss_pred             HHHHhChHhcCCC
Confidence            5688999999996

>d1psya_ a.52.1.3 (A:) 2S albumin RicC3 {Castor bean (Ricinus communis) [TaxId: 3988]}

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Seed storage protein, 2S albumin
domain: 2S albumin RicC3
species: Castor bean (Ricinus communis) [TaxId: 3988]

Probab=92.44  E-value=0.0036  Score=45.64  Aligned_cols=71  Identities=24%  Similarity=0.547  Sum_probs=47.6

Q ss_pred             CCChhhc--cCcccchhhhhCCCC-----CC-----C-----------hhHHHHHHhhhcCCCcccceeccCCCCC----
Q 030070           26 SGCTTVL--VGLAPCLNYITGNSS-----TP-----S-----------SSCCSQLASVVQSQPRCLCSVLNSGGSS----   78 (183)
Q Consensus        26 ~~C~~v~--~~L~pCl~yv~g~~~-----~P-----s-----------~~CC~~l~~v~~s~~~CLC~~l~~~~~~----   78 (183)
                      ..|...+  ..|..|..||.....     .+     .           ..||+.|+.+   ++.|.|..|......    
T Consensus        16 q~Crqe~q~q~L~sCq~Yl~qq~~~~~~~~~~~~~~~~~~~~~e~~~l~qCC~qL~q~---~~~CrC~~l~~~v~~~~qq   92 (125)
T d1psya_          16 QQCRQEVQRKDLSSCERYLRQSSSRRSTGEEVLRMPGDENQQQESQQLQQCCNQVKQV---RDECQCEAIKYIAEDQIQQ   92 (125)
T ss_dssp             SSHHHHHTTSTTSSHHHHHHSSSCCCCSCSCCCCSSCSSSCSSSCHHHHHHHHHHTTC---CSSHHHHHHHHHHHHHHHH
T ss_pred             ccCHHHHHhhhHHHHHHHHHHHHhccCCCCcccccccccccccccHHHHHHHHHHHhC---CcCCcCHHHHHHHHHHHHH
Confidence            5677653  469999999984310     01     0           3599999998   899999877643221    


Q ss_pred             --C-CcccC--hHHhhhccCCcccCC
Q 030070           79 --L-GIAIN--QSQALALPGACNVQT   99 (183)
Q Consensus        79 --~-g~~in--~trA~~LP~~Cgv~~   99 (183)
                        + +-.+.  ..+|..||..||+..
T Consensus        93 ~~~~~~~~~~~~q~Ak~LPs~C~i~~  118 (125)
T d1psya_          93 GQLHGEESERVAQRAGEIVSSCGVRC  118 (125)
T ss_dssp             TTCCTTCSHHHHHHHHHHHHHHTCST
T ss_pred             HHHHHHHHHHHHHHHHhChhhcCCcc
Confidence              1 11110  467899999999974

>d1tmqb_ a.52.1.2 (B:) Trypsin/alpha-amylase inhibitor RBI {Eleusine coracana, seeds [TaxId: 4511]}

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Proteinase/alpha-amylase inhibitors
domain: Trypsin/alpha-amylase inhibitor RBI
species: Eleusine coracana, seeds [TaxId: 4511]

Probab=87.79  E-value=0.033  Score=39.95  Aligned_cols=36  Identities=25%  Similarity=0.679  Sum_probs=25.9

Q ss_pred             cccchhhhhC----CCCC-----CChhHHHHHHhhhcCCCcccceecc
Q 030070           35 LAPCLNYITG----NSST-----PSSSCCSQLASVVQSQPRCLCSVLN   73 (183)
Q Consensus        35 L~pCl~yv~g----~~~~-----Ps~~CC~~l~~v~~s~~~CLC~~l~   73 (183)
                      |..|..||..    .+..     ....||++|.++   ...|.|..|.
T Consensus        17 L~~CR~Yv~~q~~g~g~~~~~~~~~~~CC~qL~~i---~~~CRC~ALr   61 (117)
T d1tmqb_          17 LDSCRWYVSTRTCGVGPRLATQEMKARCCRQLEAI---PAYCRCEAVR   61 (117)
T ss_dssp             TTTHHHHHHHHHHSCSCSSCHHHHHHHHHHHHHTS---CHHHHHHHHH
T ss_pred             cHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHHhC---CcccchHHHH
Confidence            7789999962    2221     224499999998   6789997554